chr1	184925	199874	184925	199874	-	transcript3.chr1.nnic@FO538757.1	transcript3.chr1.nnic	unprocessed_pseudogene	199837,195263,188791,188439,188130,187755,187376,187129,186317,185491,184925	199874,195416,188902,188584,188266,187890,187577,187233,186469,185559,185350	Gene ID= ENSG00000279457.4 TPM= 4.78 Transcript Type= NA
chr1	184925	199874	184925	199874	-	transcript6.chr1.nnic@FO538757.1	transcript6.chr1.nnic	unprocessed_pseudogene	199837,195263,188439,188130,187755,187376,187129,186317,185491,184925	199874,195416,188584,188266,187890,187577,187287,186469,185559,185350	Gene ID= ENSG00000279457.4 TPM= 2.66 Transcript Type= NA
chr1	184925	199874	184925	199874	-	transcript8.chr1.nnic@FO538757.1	transcript8.chr1.nnic	unprocessed_pseudogene	199837,188439,188130,187755,187376,187129,186317,185491,184925	199874,188584,188266,187890,187577,187287,186469,185559,185350	Gene ID= ENSG00000279457.4 TPM= 4.25 Transcript Type= NA
chr1	817371	819837	817371	819837	+	ENST00000326734.2@FAM87B	ENST00000326734.2	lincRNA	817371,818723	818202,819837	Gene ID= ENSG00000177757.2 TPM= 1.06 Transcript Type= lincRNA
chr1	827599	854387	827599	854387	+	transcript19.chr1.nnic@LINC01128	transcript19.chr1.nnic	processed_transcript	827599,829003,851927,852671,853391,853528	827775,829104,852110,852766,853478,854387	Gene ID= ENSG00000228794.8 TPM= 4.25 Transcript Type= NA
chr1	827779	843521	827779	843521	+	transcript29.chr1.nic@LINC01128	transcript29.chr1.nic	processed_transcript	827779,829003,841200	827853,829104,843521	Gene ID= ENSG00000228794.8 TPM= 2.12 Transcript Type= NA
chr1	916865	921016	916865	921016	-	ENST00000609207.1@AL645608.1	ENST00000609207.1	lincRNA	916865	921016	Gene ID= ENSG00000223764.2 TPM= 4.25 Transcript Type= retained_intron
chr1	942302	944575	942302	944575	+	transcript54.chr1.nic@SAMD11	transcript54.chr1.nic	protein_coding	942302,942559,943253,943698,943908	942488,943058,943377,943808,944575	Gene ID= ENSG00000187634.11 TPM= 3.19 Transcript Type= NA
chr1	944205	959285	944205	959285	-	transcript44.chr1.nic@NOC2L	transcript44.chr1.nic	protein_coding	959215,958929,957099,956894,956095,955923,954004,953782,953175,952412,952000,951127,948490,948131,946402,946173,945518,945042,944205	959285,959081,957273,957025,956215,956013,954082,953892,953288,952600,952139,951238,948603,948232,946545,946286,945653,945146,944800	Gene ID= ENSG00000188976.10 TPM= 95.86 Transcript Type= NA
chr1	944204	959290	944204	959290	-	ENST00000327044.6@NOC2L	ENST00000327044.6	protein_coding	959215,958929,957099,956894,956095,955923,954004,953782,953175,952412,952000,951127,948490,948131,946402,946173,945518,945057,944204	959290,959081,957273,957025,956215,956013,954082,953892,953288,952600,952139,951238,948603,948232,946545,946286,945653,945146,944800	Gene ID= ENSG00000188976.10 TPM= 227.57 Transcript Type= protein_coding
chr1	960546	965715	960546	965715	+	transcript57.chr1.nic@KLHL17	transcript57.chr1.nic	protein_coding	960546,961293,961629,961826,962355,962704,963109,963337,963920,964107,964349,964963	960800,961552,961750,962047,962471,962917,963253,963504,964008,964167,964530,965715	Gene ID= ENSG00000187961.13 TPM= 2.12 Transcript Type= NA
chr1	961049	965715	961049	965715	+	transcript60.chr1.nic@KLHL17	transcript60.chr1.nic	protein_coding	961049,961826,962704,963109,963337,963920,964107,964349,964963	961750,962471,962917,963253,963504,964008,964180,964530,965715	Gene ID= ENSG00000187961.13 TPM= 2.12 Transcript Type= NA
chr1	960587	965715	960587	965715	+	ENST00000338591.7@KLHL17	ENST00000338591.7	protein_coding	960587,961293,961629,961826,962355,962704,963109,963337,963920,964107,964349,964963	960800,961552,961750,962047,962471,962917,963253,963504,964008,964180,964530,965715	Gene ID= ENSG00000187961.13 TPM= 13.81 Transcript Type= protein_coding
chr1	975204	982431	975204	982431	-	transcript69.chr1.nic@PERM1	transcript69.chr1.nic	protein_coding	982065,978881,976499,975204	982431,981173,976624,976269	Gene ID= ENSG00000187642.9 TPM= 61.25 Transcript Type= NA
chr1	975204	982378	975204	982378	-	transcript73.chr1.nic@PERM1	transcript73.chr1.nic	protein_coding	982065,978881,975204	982378,981173,976624	Gene ID= ENSG00000187642.9 TPM= 34.17 Transcript Type= NA
chr1	975205	981029	975205	981029	-	ENST00000433179.3@PERM1	ENST00000433179.3	protein_coding	978881,976499,975205	981029,976624,976269	Gene ID= ENSG00000187642.9 TPM= 34.17 Transcript Type= protein_coding
chr1	998964	1000860	998964	1000860	-	transcript78.chr1.nic@HES4	transcript78.chr1.nic	protein_coding	999866,999526,998964	1000860,999787,999432	Gene ID= ENSG00000188290.10 TPM= 4.25 Transcript Type= NA
chr1	998962	1000172	998962	1000172	-	ENST00000428771.6@HES4	ENST00000428771.6	protein_coding	999692,999526,998962	1000172,999613,999432	Gene ID= ENSG00000188290.10 TPM= 68.33 Transcript Type= protein_coding
chr1	998966	1000096	998966	1000096	-	ENST00000481869.1@HES4	ENST00000481869.1	protein_coding	999526,998966	1000096,999432	Gene ID= ENSG00000188290.10 TPM= 39.3 Transcript Type= retained_intron
chr1	998964	1000111	998964	1000111	-	ENST00000304952.10@HES4	ENST00000304952.10	protein_coding	999866,999692,999526,998964	1000111,999787,999613,999432	Gene ID= ENSG00000188290.10 TPM= 55.05 Transcript Type= protein_coding
chr1	998970	999981	998970	999981	-	ENST00000484667.2@HES4	ENST00000484667.2	protein_coding	999866,999526,998970	999981,999613,999432	Gene ID= ENSG00000188290.10 TPM= 4.07 Transcript Type= protein_coding
chr1	1013423	1014540	1013423	1014540	+	ENST00000379389.4@ISG15	ENST00000379389.4	protein_coding	1013423,1013984	1013576,1014540	Gene ID= ENSG00000187608.8 TPM= 50.98 Transcript Type= protein_coding
chr1	1002417	1005016	1002417	1005016	-	transcript83.chr1.nnic@NA	transcript83.chr1.nnic	NA	1002417	1005016	Gene ID= novel_gene_chr1_84 TPM= 16.99 Transcript Type= NA
chr1	1081823	1084082	1081823	1084082	-	transcript90.chr1.nic@C1orf159	transcript90.chr1.nic	protein_coding	1083915,1081823	1084082,1082987	Gene ID= ENSG00000131591.17 TPM= 4.25 Transcript Type= NA
chr1	1173903	1197935	1173903	1197935	+	ENST00000379290.5@TTLL10	ENST00000379290.5	protein_coding	1173903,1174266,1174424,1179189,1179657,1180034,1180483,1180731,1181741,1182361,1182876,1183920,1184969,1196600,1197093,1197438	1173926,1174321,1174489,1179333,1179737,1180340,1180601,1180860,1181815,1182446,1183047,1184091,1185109,1196716,1197186,1197935	Gene ID= ENSG00000162571.13 TPM= 1.06 Transcript Type= protein_coding
chr1	1211326	1214132	1211326	1214132	-	ENST00000379236.3@TNFRSF4	ENST00000379236.3	protein_coding	1213983,1213663,1212992,1212638,1211942,1211704,1211326	1214132,1213785,1213093,1212704,1212138,1211832,1211625	Gene ID= ENSG00000186827.10 TPM= 10.62 Transcript Type= protein_coding
chr1	1216932	1232001	1216932	1232001	-	transcript98.chr1.nnic@SDF4	transcript98.chr1.nnic	protein_coding	1231507,1228468,1223832,1223244,1218769,1218458,1216932	1232001,1228946,1223968,1223357,1218927,1218633,1217688	Gene ID= ENSG00000078808.16 TPM= 22.97 Transcript Type= NA
chr1	1216932	1232005	1216932	1232005	-	transcript102.chr1.nnic@SDF4	transcript102.chr1.nnic	protein_coding	1231892,1228468,1223832,1223244,1218769,1218458,1216932	1232005,1228946,1223968,1223357,1220730,1218633,1217688	Gene ID= ENSG00000078808.16 TPM= 21.28 Transcript Type= NA
chr1	1216908	1232001	1216908	1232001	-	ENST00000360001.10@SDF4	ENST00000360001.10	protein_coding	1231892,1228468,1223832,1223244,1218769,1218458,1216908	1232001,1228946,1223968,1223357,1218927,1218633,1217688	Gene ID= ENSG00000078808.16 TPM= 338.83 Transcript Type= protein_coding
chr1	1216931	1232031	1216931	1232031	-	ENST00000263741.11@SDF4	ENST00000263741.11	protein_coding	1231892,1228468,1223832,1223244,1218769,1218458,1216931	1232031,1228946,1223968,1223357,1218927,1218633,1217804	Gene ID= ENSG00000078808.16 TPM= 11.68 Transcript Type= protein_coding
chr1	1216930	1220321	1216930	1220321	-	transcript106.chr1.nnic@NA	transcript106.chr1.nnic	NA	1216930	1220321	Gene ID= novel_gene_chr1_107 TPM= 2.12 Transcript Type= NA
chr1	1232265	1235041	1232265	1235041	+	ENST00000379198.3@B3GALT6	ENST00000379198.3	protein_coding	1232265	1235041	Gene ID= ENSG00000176022.4 TPM= 63.73 Transcript Type= protein_coding
chr1	1254470	1273885	1254470	1273885	-	ENST00000349431.10@UBE2J2	ENST00000349431.10	protein_coding	1273666,1267862,1263346,1257208,1256992,1256045,1254470	1273885,1267992,1263386,1257310,1257130,1256125,1255487	Gene ID= ENSG00000160087.20 TPM= 39.3 Transcript Type= protein_coding
chr1	1292390	1307897	1292390	1307897	-	transcript135.chr1.nic@ACAP3	transcript135.chr1.nic	protein_coding	1307769,1307072,1304086,1303162,1302922,1301988,1300509,1300158,1299973,1299831,1299345,1298567,1298370,1298013,1297822,1296425,1296211,1296015,1295736,1295447,1294718,1294402,1294090,1293823,1292390	1307897,1307156,1304143,1303281,1302975,1302046,1300692,1300202,1300068,1299905,1299356,1298679,1298421,1298113,1297933,1296633,1296280,1296109,1295938,1295554,1294816,1294628,1294199,1293933,1293708	Gene ID= ENSG00000131584.18 TPM= 20.39 Transcript Type= NA
chr1	1292870	1307948	1292870	1307948	-	transcript152.chr1.nic@ACAP3	transcript152.chr1.nic	protein_coding	1303162,1302922,1301988,1300509,1300158,1299973,1299831,1299345,1298567,1298370,1298013,1297822,1296425,1296211,1296015,1295736,1295447,1294718,1294402,1294090,1293823,1292870	1307948,1302975,1302046,1300692,1300202,1300068,1299905,1299356,1298679,1298421,1298113,1297933,1296633,1296280,1296109,1295938,1295554,1294816,1294628,1294199,1293933,1293708	Gene ID= ENSG00000131584.18 TPM= 14.07 Transcript Type= NA
chr1	1308024	1311677	1308024	1311677	+	transcript172.chr1.nic@PUSL1	transcript172.chr1.nic	protein_coding	1308024,1309086,1309454,1309681,1310634,1310909,1311330	1308972,1309273,1309603,1309851,1310688,1311071,1311677	Gene ID= ENSG00000169972.11 TPM= 5.31 Transcript Type= NA
chr1	1308567	1311677	1308567	1311677	+	ENST00000379031.9@PUSL1	ENST00000379031.9	protein_coding	1308567,1308915,1309086,1309454,1309681,1310634,1310909,1311330	1308720,1308972,1309273,1309603,1309851,1310688,1311071,1311677	Gene ID= ENSG00000169972.11 TPM= 9.56 Transcript Type= protein_coding
chr1	1311600	1324668	1311600	1324668	-	transcript157.chr1.nic@INTS11	transcript157.chr1.nic	protein_coding	1324581,1323147,1320996,1320456,1319296,1315520,1315404,1314824,1314301,1313732,1313509,1313035,1312787,1312593,1312440,1312226,1312018,1311600	1324668,1323287,1321093,1320529,1319524,1315618,1315438,1314962,1314365,1313921,1313592,1313124,1312949,1312700,1312501,1312368,1312147,1311924	Gene ID= ENSG00000127054.20 TPM= 12.27 Transcript Type= NA
chr1	1311597	1324691	1311597	1324691	-	ENST00000435064.5@INTS11	ENST00000435064.5	protein_coding	1324581,1320996,1320456,1319296,1315520,1315404,1314824,1314301,1313732,1313509,1313035,1312787,1312593,1312440,1312226,1312018,1311597	1324691,1321093,1320529,1319524,1315618,1315438,1314962,1314365,1313921,1313592,1313124,1312949,1312700,1312501,1312368,1312147,1311924	Gene ID= ENSG00000127054.20 TPM= 88.21 Transcript Type= protein_coding
chr1	1311601	1324673	1311601	1324673	-	ENST00000411962.5@INTS11	ENST00000411962.5	protein_coding	1324581,1323181,1315520,1315404,1314824,1314301,1313732,1313509,1313035,1312787,1312593,1312440,1312226,1312018,1311601	1324673,1323287,1315618,1315438,1314962,1314365,1313921,1313592,1313124,1312949,1312700,1312501,1312368,1312147,1311924	Gene ID= ENSG00000127054.20 TPM= 4.04 Transcript Type= protein_coding
chr1	1318681	1324687	1318681	1324687	-	ENST00000498173.2@INTS11	ENST00000498173.2	protein_coding	1324581,1320456,1318681	1324687,1321093,1319524	Gene ID= ENSG00000127054.20 TPM= 1.59 Transcript Type= retained_intron
chr1	1318697	1324611	1318697	1324611	-	ENST00000496353.1@INTS11	ENST00000496353.1	protein_coding	1324581,1318697	1324611,1321093	Gene ID= ENSG00000127054.20 TPM= 1.06 Transcript Type= retained_intron
chr1	1324767	1328897	1324767	1328897	+	ENST00000343938.8@CPTP	ENST00000343938.8	protein_coding	1324767,1326836,1327241	1325102,1327032,1328897	Gene ID= ENSG00000224051.6 TPM= 122.15 Transcript Type= protein_coding
chr1	1335279	1349415	1335279	1349415	-	transcript192.chr1.nnic@DVL1	transcript192.chr1.nnic	protein_coding	1349249,1348896,1342689,1342363,1342053,1341667,1340410,1340247,1340038,1339736,1339582,1339362,1338522,1338269,1337977,1335279	1349415,1349084,1342758,1342484,1342156,1341805,1340503,1340316,1340177,1339812,1339649,1339439,1338653,1338436,1338183,1336515	Gene ID= ENSG00000107404.19 TPM= 36.83 Transcript Type= NA
chr1	1335276	1349112	1335276	1349112	-	ENST00000378891.9@DVL1	ENST00000378891.9	protein_coding	1348896,1342689,1342363,1342053,1341667,1340410,1340247,1340038,1339736,1339582,1339362,1338522,1338269,1337977,1335276	1349112,1342758,1342484,1342156,1341805,1340503,1340316,1340177,1339812,1339649,1339439,1338653,1338436,1338183,1336515	Gene ID= ENSG00000107404.19 TPM= 37.36 Transcript Type= protein_coding
chr1	1335276	1349350	1335276	1349350	-	ENST00000378888.9@DVL1	ENST00000378888.9	protein_coding	1348896,1342689,1342363,1342053,1341667,1340410,1340247,1340038,1339736,1339582,1339287,1338522,1338269,1337977,1335276	1349350,1342758,1342484,1342156,1341805,1340503,1340316,1340177,1339812,1339649,1339439,1338653,1338436,1338183,1336515	Gene ID= ENSG00000107404.19 TPM= 27.8 Transcript Type= protein_coding
chr1	1352691	1358542	1352691	1358542	-	transcript220.chr1.nic@MXRA8	transcript220.chr1.nic	protein_coding	1358456,1356681,1355450,1355244,1354682,1354193,1354030,1353848,1352691	1358542,1356704,1355752,1355345,1355152,1354509,1354106,1353928,1353629	Gene ID= ENSG00000162576.16 TPM= 12.75 Transcript Type= NA
chr1	1352691	1358554	1352691	1358554	-	transcript221.chr1.nic@MXRA8	transcript221.chr1.nic	protein_coding	1358456,1356681,1355450,1355244,1354682,1354354,1354193,1354030,1352691	1358554,1356704,1355752,1355345,1355152,1354509,1354232,1354106,1353928	Gene ID= ENSG00000162576.16 TPM= 11.68 Transcript Type= NA
chr1	1352691	1358535	1352691	1358535	-	ENST00000309212.10@MXRA8	ENST00000309212.10	protein_coding	1358456,1356681,1355450,1355244,1354682,1354354,1354193,1354030,1353848,1352691	1358535,1356704,1355752,1355345,1355152,1354509,1354232,1354106,1353928,1353629	Gene ID= ENSG00000162576.16 TPM= 59.48 Transcript Type= protein_coding
chr1	1354145	1357869	1354145	1357869	+	transcript222.chr1.nnic@NA	transcript222.chr1.nnic	NA	1354145,1355263,1357214	1355076,1355740,1357869	Gene ID= novel_gene_chr1_223 TPM= 3.19 Transcript Type= NA
chr1	1373730	1375495	1373730	1375495	-	ENST00000338338.9@AURKAIP1	ENST00000338338.9	protein_coding	1375154,1374705,1374000,1373730	1375495,1374790,1374445,1373902	Gene ID= ENSG00000175756.13 TPM= 207.44 Transcript Type= protein_coding
chr1	1373737	1375173	1373737	1375173	-	ENST00000378853.3@AURKAIP1	ENST00000378853.3	protein_coding	1374997,1374705,1374000,1373737	1375173,1374790,1374445,1373902	Gene ID= ENSG00000175756.13 TPM= 96.62 Transcript Type= protein_coding
chr1	1373730	1375157	1373730	1375157	-	ENST00000338370.7@AURKAIP1	ENST00000338370.7	protein_coding	1374705,1374000,1373730	1375157,1374445,1373902	Gene ID= ENSG00000175756.13 TPM= 25.81 Transcript Type= protein_coding
chr1	1373732	1375169	1373732	1375169	-	ENST00000321751.9@AURKAIP1	ENST00000321751.9	protein_coding	1375075,1374705,1374000,1373732	1375169,1374790,1374445,1373902	Gene ID= ENSG00000175756.13 TPM= 26.52 Transcript Type= protein_coding
chr1	1386713	1399340	1386713	1399340	-	transcript234.chr1.nic@CCNL2	transcript234.chr1.nic	protein_coding	1399019,1398597,1398233,1395394,1393396,1392679,1391297,1390766,1390459,1390230,1387954,1387777,1386713	1399340,1398671,1398342,1395514,1393460,1392803,1391575,1390865,1390563,1390371,1388065,1387869,1387582	Gene ID= ENSG00000221978.11 TPM= 2.3 Transcript Type= NA
chr1	1386713	1399340	1386713	1399340	-	transcript237.chr1.nic@CCNL2	transcript237.chr1.nic	protein_coding	1399019,1398597,1398233,1395394,1393396,1392679,1390766,1390459,1390230,1387954,1387777,1386713	1399340,1398671,1398342,1395514,1393460,1392803,1391575,1390563,1390371,1388065,1387869,1387582	Gene ID= ENSG00000221978.11 TPM= 3.37 Transcript Type= NA
chr1	1386502	1399340	1386502	1399340	-	transcript242.chr1.nic@CCNL2	transcript242.chr1.nic	protein_coding	1399019,1398597,1398233,1395394,1393396,1390766,1390459,1390230,1387954,1387777,1386502	1399340,1398671,1398342,1395514,1393460,1392803,1390563,1390371,1388065,1387869,1387582	Gene ID= ENSG00000221978.11 TPM= 12.93 Transcript Type= NA
chr1	1390172	1394776	1390172	1394776	-	transcript257.chr1.nic@CCNL2	transcript257.chr1.nic	protein_coding	1390766,1390459,1390172	1394776,1390563,1390371	Gene ID= ENSG00000221978.11 TPM= 59.48 Transcript Type= NA
chr1	1385711	1391096	1385711	1391096	-	ENST00000480479.5@CCNL2	ENST00000480479.5	protein_coding	1390766,1390459,1390230,1388626,1388492,1387954,1387777,1385711	1391096,1390563,1390371,1388743,1388510,1388065,1387869,1387582	Gene ID= ENSG00000221978.11 TPM= 6.37 Transcript Type= retained_intron
chr1	1386495	1399312	1386495	1399312	-	ENST00000400809.7@CCNL2	ENST00000400809.7	protein_coding	1399019,1398597,1398233,1395394,1393396,1390766,1390459,1390230,1387954,1387777,1386495	1399312,1398671,1398342,1395514,1393460,1390865,1390563,1390371,1388065,1387869,1387582	Gene ID= ENSG00000221978.11 TPM= 10.27 Transcript Type= protein_coding
chr1	1392288	1399317	1392288	1399317	-	ENST00000408918.8@CCNL2	ENST00000408918.8	protein_coding	1399019,1398597,1398233,1395394,1393396,1392288	1399317,1398671,1398342,1395514,1393460,1392803	Gene ID= ENSG00000221978.11 TPM= 20.36 Transcript Type= protein_coding
chr1	1399523	1402043	1399523	1402043	+	transcript264.chr1.nnic@AL391244.1	transcript264.chr1.nnic	processed_transcript	1399523,1400605	1400249,1402043	Gene ID= ENSG00000224870.6 TPM= 4.25 Transcript Type= NA
chr1	1399527	1402046	1399527	1402046	+	ENST00000444362.2@AL391244.1	ENST00000444362.2	processed_transcript	1399527,1400158,1400605	1399685,1400303,1402046	Gene ID= ENSG00000224870.6 TPM= 18.06 Transcript Type= antisense_RNA
chr1	1399530	1402026	1399530	1402026	+	ENST00000418833.2@AL391244.1	ENST00000418833.2	processed_transcript	1399530,1400605	1400303,1402026	Gene ID= ENSG00000224870.6 TPM= 7.44 Transcript Type= retained_intron
chr1	1401913	1407317	1401913	1407317	-	transcript252.chr1.nic@MRPL20	transcript252.chr1.nic	protein_coding	1407131,1406909,1406226,1405809,1401913	1407317,1407019,1406346,1405886,1402256	Gene ID= ENSG00000242485.5 TPM= 6.37 Transcript Type= NA
chr1	1401908	1407313	1401908	1407313	-	ENST00000344843.11@MRPL20	ENST00000344843.11	protein_coding	1407131,1406909,1405809,1401908	1407313,1407019,1405886,1402256	Gene ID= ENSG00000242485.5 TPM= 97.72 Transcript Type= protein_coding
chr1	1418422	1421444	1418422	1421444	-	ENST00000537107.5@ANKRD65	ENST00000537107.5	protein_coding	1421133,1420797,1420052,1418422	1421444,1421005,1420592,1419549	Gene ID= ENSG00000235098.8 TPM= 7.44 Transcript Type= protein_coding
chr1	1435523	1440765	1435523	1440765	+	ENST00000338660.5@VWA1	ENST00000338660.5	protein_coding	1435523,1437322,1439081	1435821,1437484,1440765	Gene ID= ENSG00000179403.11 TPM= 27.09 Transcript Type= protein_coding
chr1	1435696	1440766	1435696	1440766	+	transcript281.chr1.nnic@VWA1	transcript281.chr1.nnic	protein_coding	1435696,1439081	1435821,1440766	Gene ID= ENSG00000179403.11 TPM= 26.02 Transcript Type= NA
chr1	1471760	1496202	1471760	1496202	+	transcript283.chr1.nnic@ATAD3B	transcript283.chr1.nnic	protein_coding	1471760,1477274,1477751,1478644,1479049,1480867,1482138,1482545,1485016,1485782,1486110,1486544,1487863,1489204,1490257,1490563,1495485	1472089,1477350,1477848,1478745,1479108,1480936,1482303,1482614,1485171,1485838,1486235,1486668,1487914,1489274,1490424,1490671,1496202	Gene ID= ENSG00000160072.19 TPM= 4.86 Transcript Type= NA
chr1	1471760	1496202	1471760	1496202	+	transcript285.chr1.nnic@ATAD3B	transcript285.chr1.nnic	protein_coding	1471760,1477274,1477751,1479049,1480867,1482138,1482545,1485016,1485782,1486110,1486544,1487863,1489204,1490257,1490563,1495485	1472089,1477350,1478745,1479108,1480936,1482303,1482614,1485171,1485838,1486235,1486668,1487914,1489274,1490424,1490671,1496202	Gene ID= ENSG00000160072.19 TPM= 3.8 Transcript Type= NA
chr1	1471760	1496202	1471760	1496202	+	transcript287.chr1.nnic@ATAD3B	transcript287.chr1.nnic	protein_coding	1471760,1477274,1477751,1479049,1480867,1482138,1482545,1485016,1485782,1486110,1486544,1487863,1489204,1490563,1495485	1472089,1477350,1478745,1479108,1480936,1482303,1482614,1485171,1485838,1486235,1486668,1487914,1490424,1490671,1496202	Gene ID= ENSG00000160072.19 TPM= 3.45 Transcript Type= NA
chr1	1471760	1483145	1471760	1483145	+	transcript290.chr1.nnic@ATAD3B	transcript290.chr1.nnic	protein_coding	1471760,1477274,1477751,1478644,1479049,1480867,1482138,1482545	1472089,1477350,1477848,1478745,1479108,1480936,1482303,1483145	Gene ID= ENSG00000160072.19 TPM= 2.12 Transcript Type= NA
chr1	1471760	1483145	1471760	1483145	+	transcript293.chr1.nnic@ATAD3B	transcript293.chr1.nnic	protein_coding	1471760,1477274,1477751,1479049,1480867,1482138,1482545	1472089,1477350,1478745,1479108,1480936,1482303,1483145	Gene ID= ENSG00000160072.19 TPM= 5.31 Transcript Type= NA
chr1	1471760	1483145	1471760	1483145	+	transcript294.chr1.nnic@ATAD3B	transcript294.chr1.nnic	protein_coding	1471760,1477274,1477751,1480867,1482138,1482545	1472089,1477350,1479108,1480936,1482303,1483145	Gene ID= ENSG00000160072.19 TPM= 3.19 Transcript Type= NA
chr1	1471769	1496202	1471769	1496202	+	ENST00000308647.7@ATAD3B	ENST00000308647.7	protein_coding	1471769,1477274,1478644,1479049,1480867,1482138,1482545,1485016,1485782,1486110,1486544,1487863,1489204,1490257,1490563,1495485	1472089,1477350,1478745,1479108,1480936,1482303,1482614,1485171,1485838,1486235,1486668,1487914,1489274,1490424,1490671,1496202	Gene ID= ENSG00000160072.19 TPM= 4.86 Transcript Type= protein_coding
chr1	1473136	1475361	1473136	1475361	-	transcript300.chr1.nnic@NA	transcript300.chr1.nnic	NA	1473136	1475361	Gene ID= novel_gene_chr1_301 TPM= 20.18 Transcript Type= NA
chr1	1512149	1534685	1512149	1534685	+	transcript303.chr1.nnic@ATAD3A	transcript303.chr1.nnic	protein_coding	1512149,1512326,1516012,1517311,1517716,1518921,1520141,1520548,1522744,1523511,1523839,1524273,1525240,1526461,1527695,1529223,1533926	1512239,1512473,1516088,1517412,1517775,1518990,1520306,1520617,1522899,1523567,1523964,1524397,1525291,1526531,1527862,1529331,1534685	Gene ID= ENSG00000197785.13 TPM= 5.84 Transcript Type= NA
chr1	1512141	1534685	1512141	1534685	+	transcript306.chr1.nnic@ATAD3A	transcript306.chr1.nnic	protein_coding	1512141,1516012,1517311,1517716,1518921,1520141,1520548,1522744,1523511,1523839,1524273,1525240,1526461,1527695,1529223,1533926	1512473,1516088,1517412,1517775,1518990,1520306,1520617,1522899,1523567,1523964,1524397,1525291,1526531,1527809,1529331,1534685	Gene ID= ENSG00000197785.13 TPM= 4.78 Transcript Type= NA
chr1	1512151	1534685	1512151	1534685	+	ENST00000378756.7@ATAD3A	ENST00000378756.7	protein_coding	1512151,1516012,1517311,1517716,1518921,1520141,1520548,1522744,1523511,1523839,1524273,1525240,1526461,1527695,1529223,1533926	1512473,1516088,1517412,1517775,1518990,1520306,1520617,1522899,1523567,1523964,1524397,1525291,1526531,1527862,1529331,1534685	Gene ID= ENSG00000197785.13 TPM= 56.83 Transcript Type= protein_coding
chr1	1541676	1574884	1541676	1574884	-	transcript313.chr1.nic@SSU72	transcript313.chr1.nic	protein_coding	1574478,1564773,1544863,1541676	1574884,1564916,1545002,1543987	Gene ID= ENSG00000160075.11 TPM= 5.31 Transcript Type= NA
chr1	1541673	1574869	1541673	1574869	-	ENST00000291386.3@SSU72	ENST00000291386.3	protein_coding	1574478,1564773,1544863,1543869,1541673	1574869,1564916,1545002,1543987,1542167	Gene ID= ENSG00000160075.11 TPM= 192.25 Transcript Type= protein_coding
chr1	1574975	1577075	1574975	1577075	+	ENST00000366221.3@AL645728.1	ENST00000366221.3	lincRNA	1574975	1577075	Gene ID= ENSG00000215014.4 TPM= 1.06 Transcript Type= lincRNA
chr1	1598012	1600096	1598012	1600096	-	ENST00000422725.3@FNDC10	ENST00000422725.3	protein_coding	1598012	1600096	Gene ID= ENSG00000228594.3 TPM= 9.56 Transcript Type= protein_coding
chr1	1613758	1615795	1613758	1615795	-	ENST00000607222.1@AL691432.2	ENST00000607222.1	antisense_RNA	1613758	1615795	Gene ID= ENSG00000272106.1 TPM= 16.99 Transcript Type= antisense_RNA
chr1	1615421	1630610	1615421	1630610	+	ENST00000355826.9@MIB2	ENST00000355826.9	protein_coding	1615421,1616508,1623431,1623774,1624795,1624991,1625286,1625546,1626650,1626837,1627074,1627296,1627673,1628019,1628273,1628489,1629133,1629385,1629639,1630292	1615633,1616614,1623699,1623945,1624901,1625185,1625428,1625653,1626754,1626999,1627207,1627444,1627829,1628179,1628399,1628722,1629311,1629566,1629704,1630610	Gene ID= ENSG00000197530.12 TPM= 29.32 Transcript Type= protein_coding
chr1	1615859	1630605	1615859	1630605	+	transcript332.chr1.nic@MIB2	transcript332.chr1.nic	protein_coding	1615859,1616508,1623431,1623774,1624795,1624991,1625286,1625546,1626650,1626837,1627074,1627296,1627673,1628019,1628273,1628489,1629133,1629385,1629639,1630292	1616100,1616614,1623699,1623945,1624901,1625185,1625428,1625653,1626754,1626999,1627207,1627444,1627829,1628179,1628399,1628722,1629311,1629566,1629704,1630605	Gene ID= ENSG00000197530.12 TPM= 55.25 Transcript Type= NA
chr1	1615496	1630604	1615496	1630604	+	ENST00000489635.5@MIB2	ENST00000489635.5	protein_coding	1615496,1616508,1623389,1623774,1624795,1624991,1625286,1625546,1626650,1626837,1627074,1627296,1627673,1628019,1628273,1628489,1629133,1629385,1629639,1630292	1615633,1616614,1623482,1623945,1624901,1625185,1625428,1625653,1626754,1626999,1627207,1627444,1627829,1628179,1628399,1628722,1629311,1629566,1629704,1630604	Gene ID= ENSG00000197530.12 TPM= 18.78 Transcript Type= nonsense_mediated_decay
chr1	1620127	1620420	1620127	1620420	-	transcript367.chr1.nnic@NA	transcript367.chr1.nnic	NA	1620127	1620420	Gene ID= novel_gene_chr1_368 TPM= 2.12 Transcript Type= NA
chr1	1624748	1626312	1624748	1626312	-	transcript369.chr1.nnic@NA	transcript369.chr1.nnic	NA	1624748	1626312	Gene ID= novel_gene_chr1_370 TPM= 6.37 Transcript Type= NA
chr1	1624757	1628195	1624757	1628195	-	transcript362.chr1.nnic@NA	transcript362.chr1.nnic	NA	1625650,1624757	1628195,1625377	Gene ID= novel_gene_chr1_363 TPM= 4.25 Transcript Type= NA
chr1	1632095	1634654	1632095	1634654	+	ENST00000356026.9@MMP23B	ENST00000356026.9	protein_coding	1632095,1632783,1632981,1633188,1633748,1633989,1634202,1634451	1632374,1632913,1633120,1633355,1633912,1634099,1634328,1634654	Gene ID= ENSG00000189409.13 TPM= 13.81 Transcript Type= protein_coding
chr1	1632179	1634654	1632179	1634654	+	ENST00000378675.7@MMP23B	ENST00000378675.7	protein_coding	1632179,1632783,1632981,1633748,1633989,1634202,1634451	1632374,1632913,1633355,1633912,1634099,1634328,1634654	Gene ID= ENSG00000189409.13 TPM= 10.62 Transcript Type= protein_coding
chr1	1633679	1634604	1633679	1634604	+	ENST00000489782.1@MMP23B	ENST00000489782.1	protein_coding	1633679,1633989,1634202,1634451	1633912,1634099,1634328,1634604	Gene ID= ENSG00000189409.13 TPM= 27.62 Transcript Type= retained_intron
chr1	1688334	1690000	1688334	1690000	+	transcript411.chr1.nnic@NA	transcript411.chr1.nnic	NA	1688334	1690000	Gene ID= novel_gene_chr1_412 TPM= 3.19 Transcript Type= NA
chr1	1698626	1700694	1698626	1700694	-	transcript413.chr1.nnic@NA	transcript413.chr1.nnic	NA	1698626	1700694	Gene ID= novel_gene_chr1_414 TPM= 2.12 Transcript Type= NA
chr1	1709518	1724519	1709518	1724519	-	transcript388.chr1.nic@CDK11A	transcript388.chr1.nic	protein_coding	1724258,1722708,1721596,1719358,1716346,1712264,1709518	1724519,1722831,1721711,1719455,1716478,1712400,1709640	Gene ID= ENSG00000008128.22 TPM= 3.19 Transcript Type= NA
chr1	1727389	1746046	1727389	1746046	-	transcript381.chr1.nnic@SLC35E2	transcript381.chr1.nnic	protein_coding	1745724,1744251,1739236,1738922,1738321,1734690,1731901,1727389	1746046,1744668,1739704,1739057,1738448,1734835,1732523,1729426	Gene ID= ENSG00000215790.6 TPM= 4.25 Transcript Type= NA
chr1	1727389	1746061	1727389	1746061	-	transcript390.chr1.nnic@SLC35E2	transcript390.chr1.nnic	protein_coding	1745724,1739236,1738922,1738321,1734690,1731901,1727389	1746061,1739704,1739057,1738448,1734835,1732523,1729426	Gene ID= ENSG00000215790.6 TPM= 2.12 Transcript Type= NA
chr1	1728132	1731395	1728132	1731395	+	transcript409.chr1.nnic@NA	transcript409.chr1.nnic	NA	1728132	1731395	Gene ID= novel_gene_chr1_410 TPM= 31.86 Transcript Type= NA
chr1	1751232	1778470	1751232	1778470	-	ENST00000341426.9@NADK	ENST00000341426.9	protein_coding	1778289,1765228,1761952,1757181,1756503,1756258,1755374,1754544,1754284,1754051,1753567,1751232	1778470,1765446,1762035,1757310,1756608,1756343,1755476,1754698,1754383,1754208,1753649,1753060	Gene ID= ENSG00000008130.15 TPM= 25.49 Transcript Type= protein_coding
chr1	1785286	1891136	1785286	1891136	-	transcript452.chr1.nic@GNB1	transcript452.chr1.nic	protein_coding	1890820,1839190,1825397,1817837,1815756,1806475,1804419,1793245,1790395,1789053,1785286	1891136,1839238,1825499,1817875,1815862,1806538,1804581,1793311,1790596,1789269,1787437	Gene ID= ENSG00000078369.17 TPM= 31.68 Transcript Type= NA
chr1	1785286	1891056	1785286	1891056	-	ENST00000378609.8@GNB1	ENST00000378609.8	protein_coding	1890820,1839190,1825397,1817837,1815756,1806475,1804419,1793245,1790395,1789053,1787322,1785286	1891056,1839238,1825499,1817875,1815862,1806538,1804581,1793311,1790596,1789269,1787437,1787053	Gene ID= ENSG00000078369.17 TPM= 141.21 Transcript Type= protein_coding
chr1	1785285	1891117	1785285	1891117	-	ENST00000610897.4@GNB1	ENST00000610897.4	protein_coding	1890820,1825397,1817837,1815756,1806475,1804419,1793245,1790395,1789053,1787322,1785285	1891117,1825499,1817875,1815862,1806538,1804581,1793311,1790596,1789269,1787437,1787053	Gene ID= ENSG00000078369.17 TPM= 28.63 Transcript Type= protein_coding
chr1	1785285	1891117	1785285	1891117	-	ENST00000615252.4@GNB1	ENST00000615252.4	protein_coding	1890820,1839190,1825397,1806475,1804419,1793245,1790395,1789053,1787322,1785285	1891117,1839238,1825499,1806538,1804581,1793311,1790596,1789269,1787437,1787053	Gene ID= ENSG00000078369.17 TPM= 8.18 Transcript Type= protein_coding
chr1	1859618	1861126	1859618	1861126	+	transcript464.chr1.nnic@NA	transcript464.chr1.nnic	NA	1859618	1861126	Gene ID= novel_gene_chr1_465 TPM= 15.93 Transcript Type= NA
chr1	1917590	1918797	1917590	1918797	-	ENST00000378602.3@TMEM52	ENST00000378602.3	protein_coding	1918253,1917590	1918797,1918162	Gene ID= ENSG00000178821.12 TPM= 1.06 Transcript Type= protein_coding
chr1	1917591	1919273	1917591	1919273	-	ENST00000310991.7@TMEM52	ENST00000310991.7	protein_coding	1919182,1919045,1918893,1918253,1917591	1919273,1919088,1918934,1918431,1918162	Gene ID= ENSG00000178821.12 TPM= 1.06 Transcript Type= protein_coding
chr1	2174521	2185390	2174521	2185390	+	transcript473.chr1.nic@PRKCZ	transcript473.chr1.nic	protein_coding	2174521,2175224,2184583,2184922	2174833,2175313,2184698,2185390	Gene ID= ENSG00000067606.16 TPM= 5.31 Transcript Type= NA
chr1	2050470	2185395	2050470	2185395	+	ENST00000378567.7@PRKCZ	ENST00000378567.7	protein_coding	2050470,2055441,2056484,2059541,2135262,2144210,2146027,2148872,2150790,2155995,2169518,2172055,2172301,2173897,2174754,2175224,2184583,2184922	2050701,2055562,2056573,2059591,2135347,2144341,2146108,2148924,2150978,2156092,2169604,2172190,2172388,2174016,2174833,2175313,2184698,2185395	Gene ID= ENSG00000067606.16 TPM= 33.99 Transcript Type= protein_coding
chr1	2078846	2081070	2078846	2081070	-	transcript488.chr1.nnic@NA	transcript488.chr1.nnic	NA	2078846	2081070	Gene ID= novel_gene_chr1_489 TPM= 3.19 Transcript Type= NA
chr1	2189548	2195061	2189548	2195061	-	transcript480.chr1.nnic@FAAP20	transcript480.chr1.nnic	protein_coding	2194834,2193998,2193639,2189548	2195061,2194133,2193910,2189781	Gene ID= ENSG00000162585.16 TPM= 4.07 Transcript Type= NA
chr1	2189548	2195081	2189548	2195081	-	transcript481.chr1.nnic@FAAP20	transcript481.chr1.nnic	protein_coding	2195038,2193998,2193639,2189548	2195081,2194133,2193910,2189781	Gene ID= ENSG00000162585.16 TPM= 4.07 Transcript Type= NA
chr1	2184461	2194775	2184461	2194775	-	ENST00000400919.7@FAAP20	ENST00000400919.7	protein_coding	2194688,2193639,2184461	2194775,2193910,2185513	Gene ID= ENSG00000162585.16 TPM= 3.19 Transcript Type= protein_coding
chr1	2189548	2194774	2189548	2194774	-	ENST00000378546.8@FAAP20	ENST00000378546.8	protein_coding	2194688,2193998,2193639,2189548	2194774,2194133,2193910,2189781	Gene ID= ENSG00000162585.16 TPM= 32.75 Transcript Type= protein_coding
chr1	2189548	2194750	2189548	2194750	-	ENST00000378543.2@FAAP20	ENST00000378543.2	protein_coding	2194688,2193639,2189548	2194750,2193910,2189781	Gene ID= ENSG00000162585.16 TPM= 1.59 Transcript Type= protein_coding
chr1	2191901	2194748	2191901	2194748	-	ENST00000420515.1@FAAP20	ENST00000420515.1	protein_coding	2194688,2193998,2193639,2191901	2194748,2194133,2193910,2192975	Gene ID= ENSG00000162585.16 TPM= 1.06 Transcript Type= protein_coding
chr1	2228033	2308655	2228033	2308655	+	transcript492.chr1.nic@SKI	transcript492.chr1.nic	protein_coding	2228033,2302978,2303285,2303840,2304293,2306020,2306577	2229735,2303103,2303400,2304108,2304585,2306250,2308655	Gene ID= ENSG00000157933.9 TPM= 3.19 Transcript Type= NA
chr1	2228695	2310119	2228695	2310119	+	ENST00000378536.4@SKI	ENST00000378536.4	protein_coding	2228695,2302978,2303285,2303840,2304293,2306020,2306577	2229735,2303103,2303400,2304102,2304585,2306250,2310119	Gene ID= ENSG00000157933.9 TPM= 25.49 Transcript Type= protein_coding
chr1	2235047	2238213	2235047	2238213	-	transcript503.chr1.nnic@NA	transcript503.chr1.nnic	NA	2235047	2238213	Gene ID= novel_gene_chr1_504 TPM= 4.25 Transcript Type= NA
chr1	2277160	2280216	2277160	2280216	+	transcript501.chr1.nnic@NA	transcript501.chr1.nnic	NA	2277160	2280216	Gene ID= novel_gene_chr1_502 TPM= 2.12 Transcript Type= NA
chr1	2378977	2391550	2378977	2391550	-	transcript507.chr1.nic@MORN1	transcript507.chr1.nic	protein_coding	2391458,2389925,2388239,2387419,2385807,2384978,2378977	2391550,2389996,2388337,2387529,2385897,2385065,2379227	Gene ID= ENSG00000116151.13 TPM= 2.12 Transcript Type= NA
chr1	2391804	2405442	2391804	2405442	+	transcript516.chr1.nnic@RER1	transcript516.chr1.nnic	protein_coding	2391804,2393208,2395784,2397116,2399415,2400857,2402207,2403035	2391958,2393355,2395871,2397220,2399514,2400935,2402342,2405442	Gene ID= ENSG00000157916.19 TPM= 8.23 Transcript Type= NA
chr1	2391809	2405442	2391809	2405442	+	transcript519.chr1.nnic@RER1	transcript519.chr1.nnic	protein_coding	2391809,2393270,2395784,2397116,2399415,2400857,2402207,2403035	2391958,2393355,2395871,2397220,2399514,2400935,2402342,2405442	Gene ID= ENSG00000157916.19 TPM= 8.23 Transcript Type= NA
chr1	2391833	2405444	2391833	2405444	+	ENST00000605895.5@RER1	ENST00000605895.5	protein_coding	2391833,2395784,2397116,2399415,2400857,2402207,2403035	2391958,2395871,2397220,2399514,2400935,2402342,2405444	Gene ID= ENSG00000157916.19 TPM= 46.47 Transcript Type= protein_coding
chr1	2391890	2403751	2391890	2403751	+	ENST00000378512.5@RER1	ENST00000378512.5	protein_coding	2391890,2395784,2397116,2399415,2400857,2402097,2403035	2391958,2395871,2397220,2399514,2400935,2402342,2403751	Gene ID= ENSG00000157916.19 TPM= 18.06 Transcript Type= protein_coding
chr1	2404819	2412571	2404819	2412571	-	ENST00000447513.6@PEX10	ENST00000447513.6	protein_coding	2412391,2410371,2408452,2406720,2406484,2404819	2412571,2410451,2408858,2406895,2406619,2405834	Gene ID= ENSG00000157911.9 TPM= 47.8 Transcript Type= protein_coding
chr1	2505450	2507066	2505450	2507066	-	transcript541.chr1.nnic@NA	transcript541.chr1.nnic	NA	2505450	2507066	Gene ID= novel_gene_chr1_542 TPM= 3.19 Transcript Type= NA
chr1	2508533	2526628	2508533	2526628	-	ENST00000378466.7@PANK4	ENST00000378466.7	protein_coding	2526464,2521718,2521101,2520723,2520322,2519801,2519143,2518516,2518164,2515562,2514354,2514002,2512888,2511628,2511338,2510678,2510057,2509862,2508533	2526628,2521800,2521315,2520906,2520414,2519954,2519324,2518597,2518264,2515717,2514466,2514089,2513039,2511683,2511387,2510782,2510157,2509930,2509060	Gene ID= ENSG00000157881.13 TPM= 105.15 Transcript Type= protein_coding
chr1	2528745	2530245	2528745	2530245	-	ENST00000378453.3@HES5	ENST00000378453.3	protein_coding	2530111,2529846,2528745	2530245,2530011,2529749	Gene ID= ENSG00000197921.5 TPM= 1.06 Transcript Type= protein_coding
chr1	2546465	2547460	2546465	2547460	+	ENST00000606645.1@AL139246.5	ENST00000606645.1	lincRNA	2546465	2547460	Gene ID= ENSG00000272449.1 TPM= 1.06 Transcript Type= lincRNA
chr1	2556352	2563747	2556352	2563747	+	transcript559.chr1.nic@TNFRSF14	transcript559.chr1.nic	protein_coding	2556352,2557726,2558343,2558881,2560624,2561673,2562865,2563148	2556733,2557834,2558468,2559978,2560714,2561815,2562896,2563747	Gene ID= ENSG00000157873.17 TPM= 3.19 Transcript Type= NA
chr1	2556366	2563829	2556366	2563829	+	ENST00000355716.4@TNFRSF14	ENST00000355716.4	protein_coding	2556366,2557726,2558343,2559823,2560624,2561673,2562865,2563148	2556733,2557834,2558468,2559978,2560714,2561815,2562896,2563829	Gene ID= ENSG00000157873.17 TPM= 3.19 Transcript Type= protein_coding
chr1	2586775	2591468	2586775	2591468	+	ENST00000419916.6@FAM213B	ENST00000419916.6	protein_coding	2586775,2587091,2587741,2588390,2588550,2588922,2589410	2586948,2587295,2587792,2588453,2588625,2589040,2591468	Gene ID= ENSG00000157870.14 TPM= 9.56 Transcript Type= protein_coding
chr1	2586798	2591463	2586798	2591463	+	ENST00000378427.5@FAM213B	ENST00000378427.5	protein_coding	2586798,2587091,2587741,2588390,2588550,2588954,2589410	2586948,2587295,2587792,2588453,2588625,2589040,2591463	Gene ID= ENSG00000157870.14 TPM= 6.37 Transcript Type= protein_coding
chr1	3064072	3068810	3064072	3068810	-	transcript570.chr1.nic@LINC00982	transcript570.chr1.nic	antisense_RNA	3068222,3067337,3064072	3068810,3068048,3064302	Gene ID= ENSG00000177133.10 TPM= 2.12 Transcript Type= NA
chr1	3059615	3062531	3059615	3062531	-	ENST00000606861.1@LINC00982	ENST00000606861.1	antisense_RNA	3059615	3062531	Gene ID= ENSG00000177133.10 TPM= 1.06 Transcript Type= antisense_RNA
chr1	3069171	3406580	3069171	3406580	+	transcript571.chr1.nic@PRDM16	transcript571.chr1.nic	protein_coding	3069171,3186125,3244087,3385152,3396491,3402791,3404739,3405495	3069296,3186474,3244137,3385286,3396593,3402998,3404886,3406580	Gene ID= ENSG00000142611.16 TPM= 4.25 Transcript Type= NA
chr1	3106918	3108914	3106918	3108914	+	transcript587.chr1.nnic@NA	transcript587.chr1.nnic	NA	3106918	3108914	Gene ID= novel_gene_chr1_588 TPM= 4.25 Transcript Type= NA
chr1	3311567	3313827	3311567	3313827	-	transcript583.chr1.nnic@NA	transcript583.chr1.nnic	NA	3313612,3311567	3313827,3313513	Gene ID= novel_gene_chr1_584 TPM= 2.12 Transcript Type= NA
chr1	3312745	3313827	3312745	3313827	-	transcript585.chr1.nnic@NA	transcript585.chr1.nnic	NA	3313612,3312745	3313827,3313513	Gene ID= novel_gene_chr1_586 TPM= 2.12 Transcript Type= NA
chr1	3069211	3438621	3069211	3438621	+	ENST00000270722.9@PRDM16	ENST00000270722.9	protein_coding	3069211,3186125,3244087,3385152,3396491,3402791,3404739,3405495,3411384,3414560,3417828,3418667,3425581,3426051,3430872,3431966,3433677	3069296,3186474,3244137,3385286,3396593,3402998,3404886,3405648,3412800,3414647,3417997,3418744,3425750,3426225,3431108,3432140,3438621	Gene ID= ENSG00000142611.16 TPM= 1.77 Transcript Type= protein_coding
chr1	3069197	3435421	3069197	3435421	+	ENST00000378391.6@PRDM16	ENST00000378391.6	protein_coding	3069197,3186125,3244087,3385152,3396491,3402791,3404739,3405495,3411384,3414560,3417828,3418667,3425581,3426051,3430872,3431966,3433734	3069296,3186474,3244137,3385286,3396593,3402998,3404886,3405648,3412800,3414647,3417997,3418744,3425750,3426225,3431108,3432140,3435421	Gene ID= ENSG00000142611.16 TPM= 1.77 Transcript Type= protein_coding
chr1	3069168	3434342	3069168	3434342	+	ENST00000511072.5@PRDM16	ENST00000511072.5	protein_coding	3069168,3186125,3244087,3385149,3396491,3402791,3404739,3405495,3411384,3414560,3417828,3418667,3425581,3426051,3430872,3433677	3069296,3186474,3244137,3385286,3396593,3402998,3404886,3405648,3412800,3414647,3417997,3418744,3425750,3426225,3431108,3434342	Gene ID= ENSG00000142611.16 TPM= 1.77 Transcript Type= protein_coding
chr1	3625002	3630127	3625002	3630127	+	ENST00000378344.6@TPRG1L	ENST00000378344.6	protein_coding	3625002,3625424,3625713,3627500,3628409	3625273,3625515,3625889,3627653,3630127	Gene ID= ENSG00000158109.14 TPM= 161.45 Transcript Type= protein_coding
chr1	3630767	3650104	3630767	3650104	-	transcript605.chr1.nic@WRAP73	transcript605.chr1.nic	protein_coding	3649931,3647408,3646666,3638750,3636995,3635944,3634997,3633398,3632213,3631466,3630767	3650104,3647560,3646782,3638822,3637098,3636030,3635074,3633503,3632338,3631657,3631117	Gene ID= ENSG00000116213.15 TPM= 7.08 Transcript Type= NA
chr1	3630767	3650073	3630767	3650073	-	ENST00000270708.11@WRAP73	ENST00000270708.11	protein_coding	3649931,3647408,3646666,3638750,3636995,3635944,3635160,3634997,3633398,3632213,3631466,3630767	3650073,3647560,3646782,3638822,3637098,3636030,3635294,3635074,3633503,3632338,3631657,3631117	Gene ID= ENSG00000116213.15 TPM= 46.38 Transcript Type= protein_coding
chr1	3630767	3650058	3630767	3650058	-	ENST00000378322.7@WRAP73	ENST00000378322.7	protein_coding	3649931,3647408,3646666,3638750,3636995,3635944,3635160,3634997,3633398,3632213,3630767	3650058,3647560,3646782,3638822,3637098,3636030,3635294,3635074,3633503,3632338,3631657	Gene ID= ENSG00000116213.15 TPM= 4.96 Transcript Type= protein_coding
chr1	3737149	3747375	3737149	3747375	-	transcript618.chr1.nic@TP73-AS1	transcript618.chr1.nic	transcribed_unitary_pseudogene	3745607,3743061,3742804,3740233,3737149	3747375,3743190,3742911,3740387,3737854	Gene ID= ENSG00000227372.11 TPM= 4.25 Transcript Type= NA
chr1	3737149	3747375	3737149	3747375	-	transcript619.chr1.nic@TP73-AS1	transcript619.chr1.nic	transcribed_unitary_pseudogene	3745607,3743061,3742804,3740233,3737149	3747375,3743190,3742960,3740387,3737854	Gene ID= ENSG00000227372.11 TPM= 2.12 Transcript Type= NA
chr1	3737149	3747375	3737149	3747375	-	transcript620.chr1.nic@TP73-AS1	transcript620.chr1.nic	transcribed_unitary_pseudogene	3745607,3743061,3742804,3740233,3737149	3747375,3743190,3742911,3740387,3738513	Gene ID= ENSG00000227372.11 TPM= 7.44 Transcript Type= NA
chr1	3737149	3747336	3737149	3747336	-	ENST00000423764.5@TP73-AS1	ENST00000423764.5	transcribed_unitary_pseudogene	3745607,3743061,3742804,3740233,3737149	3747336,3743190,3742957,3740387,3737854	Gene ID= ENSG00000227372.11 TPM= 10.62 Transcript Type= processed_transcript
chr1	3772722	3775982	3772722	3775982	+	transcript641.chr1.nnic@SMIM1	transcript641.chr1.nnic	protein_coding	3772722,3773063,3775299,3775795	3772788,3773181,3775483,3775982	Gene ID= ENSG00000235169.7 TPM= 6.37 Transcript Type= NA
chr1	3780220	3796521	3780220	3796521	-	transcript632.chr1.nnic@LRRC47	transcript632.chr1.nnic	protein_coding	3795862,3786849,3785087,3783996,3782661,3781512,3780460,3780220	3796521,3787310,3785203,3784111,3782763,3781601,3781336,3780419	Gene ID= ENSG00000130764.9 TPM= 18.06 Transcript Type= NA
chr1	3778558	3796504	3778558	3796504	-	ENST00000378251.2@LRRC47	ENST00000378251.2	protein_coding	3795862,3786849,3785087,3783996,3782661,3781512,3778558	3796504,3787310,3785203,3784111,3782763,3781601,3781336	Gene ID= ENSG00000130764.9 TPM= 7.44 Transcript Type= protein_coding
chr1	3829338	3857214	3829338	3857214	-	transcript648.chr1.nic@CEP104	transcript648.chr1.nic	protein_coding	3856889,3852295,3848608,3847475,3845289,3844907,3839608,3838964,3837292,3836495,3834925,3833862,3831046,3829791,3829338	3857214,3852421,3848781,3847613,3845351,3844983,3839776,3839119,3837345,3836692,3835092,3834035,3831222,3829997,3829373	Gene ID= ENSG00000116198.12 TPM= 4.25 Transcript Type= NA
chr1	3829338	3857399	3829338	3857399	-	transcript649.chr1.nic@CEP104	transcript649.chr1.nic	protein_coding	3856889,3852295,3848608,3847475,3845289,3844907,3839608,3838964,3837292,3836495,3834925,3833862,3831046,3829791,3829338	3857399,3852421,3848781,3847613,3845351,3844983,3839776,3839119,3837519,3836692,3835092,3834035,3831222,3829997,3829373	Gene ID= ENSG00000116198.12 TPM= 18.06 Transcript Type= NA
chr1	3829338	3857210	3829338	3857210	-	transcript652.chr1.nnic@CEP104	transcript652.chr1.nnic	protein_coding	3856889,3852295,3848608,3847475,3845289,3844907,3839608,3838964,3837292,3834925,3833862,3831046,3829791,3829338	3857210,3852421,3848781,3847613,3845351,3844983,3839776,3839119,3837519,3835092,3834035,3831222,3829997,3829373	Gene ID= ENSG00000116198.12 TPM= 3.19 Transcript Type= NA
chr1	3841809	3857205	3841809	3857205	-	transcript654.chr1.nnic@CEP104	transcript654.chr1.nnic	protein_coding	3856889,3852295,3848608,3847475,3845289,3844907,3841809	3857205,3852421,3848781,3847613,3845351,3844983,3842067	Gene ID= ENSG00000116198.12 TPM= 2.12 Transcript Type= NA
chr1	3889125	3900285	3889125	3900285	-	ENST00000361605.3@C1orf174	ENST00000361605.3	protein_coding	3900172,3892883,3890569,3889125	3900285,3892996,3891057,3890073	Gene ID= ENSG00000198912.10 TPM= 24.43 Transcript Type= protein_coding
chr1	5955750	5958871	5955750	5958871	+	transcript667.chr1.nnic@NA	transcript667.chr1.nnic	NA	5955750	5958871	Gene ID= novel_gene_chr1_668 TPM= 3.19 Transcript Type= NA
chr1	5992363	6101193	5992363	6101193	+	ENST00000378097.5@KCNAB2	ENST00000378097.5	protein_coding	5992363,6040517,6041831,6072755,6073733,6082195,6085204,6087467,6089008,6090389,6094400,6095323,6095530,6096636,6097269,6098485	5992788,6040645,6041872,6072798,6073770,6082274,6085248,6087511,6089051,6090475,6094485,6095443,6095624,6096756,6097357,6101193	Gene ID= ENSG00000069424.14 TPM= 10.8 Transcript Type= protein_coding
chr1	6002976	6101179	6002976	6101179	+	transcript671.chr1.nnic@KCNAB2	transcript671.chr1.nnic	protein_coding	6002976,6040517,6041831,6072755,6073733,6082195,6085204,6087467,6089008,6090389,6094400,6095323,6095530,6096636,6097269,6098485	6003153,6040645,6041872,6072798,6073770,6082274,6085248,6087511,6089051,6090475,6094485,6095443,6095624,6096756,6097357,6101179	Gene ID= ENSG00000069424.14 TPM= 9.38 Transcript Type= NA
chr1	6026013	6101192	6026013	6101192	+	ENST00000341524.5@KCNAB2	ENST00000341524.5	protein_coding	6026013,6040517,6041831,6072755,6073733,6082195,6085204,6087467,6089008,6090389,6094400,6095323,6095530,6096636,6097269,6098485	6026445,6040645,6041872,6072798,6073770,6082274,6085248,6087511,6089051,6090475,6094485,6095443,6095624,6096756,6097357,6101192	Gene ID= ENSG00000069424.14 TPM= 18.59 Transcript Type= protein_coding
chr1	6026013	6101192	6026013	6101192	+	ENST00000352527.5@KCNAB2	ENST00000352527.5	protein_coding	6026013,6040517,6072755,6073733,6082195,6085204,6087467,6089008,6090389,6094400,6095323,6095530,6096636,6097269,6098485	6026445,6040645,6072798,6073770,6082274,6085248,6087511,6089051,6090475,6094485,6095443,6095624,6096756,6097357,6101192	Gene ID= ENSG00000069424.14 TPM= 12.21 Transcript Type= protein_coding
chr1	6185020	6199612	6185020	6199612	-	ENST00000234875.8@RPL22	ENST00000234875.8	protein_coding	6199562,6197652,6192930,6185020	6199612,6197756,6193054,6186816	Gene ID= ENSG00000116251.9 TPM= 37.18 Transcript Type= protein_coding
chr1	6204840	6205780	6204840	6205780	-	ENST00000455744.1@AL031847.1	ENST00000455744.1	antisense_RNA	6205754,6205206,6204840	6205780,6205413,6204982	Gene ID= ENSG00000226944.1 TPM= 1.06 Transcript Type= antisense_RNA
chr1	6206270	6220805	6206270	6220805	+	transcript703.chr1.nnic@RNF207	transcript703.chr1.nnic	protein_coding	6206270,6206629,6207379,6208881,6209115,6209268,6209414,6209924,6210223,6210370,6210870,6211867,6212231,6212682,6213066,6218289,6219236	6206302,6206726,6207511,6209025,6209196,6209343,6209539,6209970,6210295,6210438,6211118,6212053,6212416,6212733,6213183,6218369,6220805	Gene ID= ENSG00000158286.12 TPM= 9.56 Transcript Type= NA
chr1	6206176	6221299	6206176	6221299	+	ENST00000377939.4@RNF207	ENST00000377939.4	protein_coding	6206176,6206536,6207379,6208881,6209115,6209268,6209414,6209924,6210223,6210370,6210870,6211021,6211867,6212231,6212682,6213066,6218289,6219236	6206302,6206726,6207511,6209025,6209196,6209343,6209539,6209970,6210295,6210438,6210938,6211118,6212053,6212416,6212733,6213183,6218369,6221299	Gene ID= ENSG00000158286.12 TPM= 13.81 Transcript Type= protein_coding
chr1	6214632	6215533	6214632	6215533	-	transcript726.chr1.nnic@NA	transcript726.chr1.nnic	NA	6214632	6215533	Gene ID= novel_gene_chr1_727 TPM= 25.49 Transcript Type= NA
chr1	6215333	6217392	6215333	6217392	-	transcript724.chr1.nnic@NA	transcript724.chr1.nnic	NA	6215333	6217392	Gene ID= novel_gene_chr1_725 TPM= 16.99 Transcript Type= NA
chr1	6216729	6221650	6216729	6221650	-	transcript722.chr1.nnic@NA	transcript722.chr1.nnic	NA	6216729	6221650	Gene ID= novel_gene_chr1_723 TPM= 10.62 Transcript Type= NA
chr1	6231686	6236005	6231686	6236005	-	transcript717.chr1.nic@ICMT	transcript717.chr1.nic	protein_coding	6235717,6234886,6233474,6231686	6236005,6234974,6233643,6232119	Gene ID= ENSG00000116237.15 TPM= 3.19 Transcript Type= NA
chr1	6221193	6235940	6221193	6235940	-	ENST00000343813.9@ICMT	ENST00000343813.9	protein_coding	6235717,6234886,6233474,6231902,6221193	6235940,6234974,6233643,6232119,6225262	Gene ID= ENSG00000116237.15 TPM= 7.44 Transcript Type= protein_coding
chr1	6223491	6235972	6223491	6235972	-	ENST00000489498.5@ICMT	ENST00000489498.5	protein_coding	6235717,6234886,6234405,6233474,6231902,6223491	6235972,6234974,6234511,6233643,6232119,6225262	Gene ID= ENSG00000116237.15 TPM= 20.18 Transcript Type= nonsense_mediated_decay
chr1	6247355	6261098	6247355	6261098	-	transcript730.chr1.nic@GPR153	transcript730.chr1.nic	protein_coding	6260825,6254550,6253718,6251338,6247355	6261098,6255014,6254147,6251530,6250624	Gene ID= ENSG00000158292.6 TPM= 29.74 Transcript Type= NA
chr1	6264273	6394391	6264273	6394391	-	ENST00000361521.8@ACOT7	ENST00000361521.8	protein_coding	6393257,6349749,6339433,6333477,6327299,6318492,6294864,6281102,6264273	6394391,6349866,6339589,6333568,6327413,6318578,6294980,6281286,6264695	Gene ID= ENSG00000097021.19 TPM= 30.8 Transcript Type= protein_coding
chr1	6461151	6463597	6461151	6463597	-	transcript740.chr1.nic@TNFRSF25	transcript740.chr1.nic	protein_coding	6463072,6462863,6462629,6461994,6461151	6463597,6462970,6462666,6462174,6461762	Gene ID= ENSG00000215788.9 TPM= 4.78 Transcript Type= NA
chr1	6461151	6466099	6461151	6466099	-	ENST00000513135.5@TNFRSF25	ENST00000513135.5	protein_coding	6465440,6465088,6462863,6462629,6461994,6461151	6466099,6465222,6464719,6462666,6462174,6461762	Gene ID= ENSG00000215788.9 TPM= 18.06 Transcript Type= retained_intron
chr1	6461151	6466195	6461151	6466195	-	ENST00000356876.7@TNFRSF25	ENST00000356876.7	protein_coding	6466069,6465440,6465088,6464552,6464375,6463072,6462863,6462629,6461994,6461151	6466195,6465560,6465222,6464719,6464453,6463127,6462970,6462666,6462174,6461762	Gene ID= ENSG00000215788.9 TPM= 5.84 Transcript Type= protein_coding
chr1	6521347	6554535	6521347	6554535	-	ENST00000377705.5@NOL9	ENST00000377705.5	protein_coding	6554107,6550396,6549571,6545045,6544826,6541830,6533280,6532463,6531968,6528994,6526696,6521347	6554535,6550615,6549698,6545180,6544922,6541927,6533441,6532760,6532079,6529171,6526829,6526003	Gene ID= ENSG00000162408.10 TPM= 16.99 Transcript Type= protein_coding
chr1	6579994	6589280	6579994	6589280	+	transcript749.chr1.nic@ZBTB48	transcript749.chr1.nic	protein_coding	6579994,6580541,6582058,6585919,6586695,6587205,6587478,6588060,6588278,6588756,6588916	6580049,6581299,6582299,6586030,6586787,6587291,6587632,6588196,6588442,6588844,6589280	Gene ID= ENSG00000204859.12 TPM= 3.45 Transcript Type= NA
chr1	6585302	6589280	6585302	6589280	+	ENST00000482360.5@ZBTB48	ENST00000482360.5	protein_coding	6585302,6587205,6587478,6588060,6588278,6588756,6588916	6586787,6587291,6587632,6588196,6588442,6588844,6589280	Gene ID= ENSG00000204859.12 TPM= 1.33 Transcript Type= retained_intron
chr1	6580048	6589280	6580048	6589280	+	ENST00000377674.8@ZBTB48	ENST00000377674.8	protein_coding	6580048,6580541,6582058,6585919,6586695,6587205,6587478,6588060,6588278,6588756,6588916	6580136,6581299,6582299,6586030,6586787,6587291,6587632,6588196,6588442,6588844,6589280	Gene ID= ENSG00000204859.12 TPM= 6.64 Transcript Type= protein_coding
chr1	6590724	6602869	6590724	6602869	-	ENST00000377658.8@KLHL21	ENST00000377658.8	protein_coding	6601797,6599047,6595485,6590724	6602869,6599452,6595557,6593658	Gene ID= ENSG00000162413.16 TPM= 82.85 Transcript Type= protein_coding
chr1	6613685	6624033	6613685	6624033	+	ENST00000377648.4@PHF13	ENST00000377648.4	protein_coding	6613685,6616757,6619803,6621411	6614105,6616858,6620337,6624033	Gene ID= ENSG00000116273.5 TPM= 18.06 Transcript Type= protein_coding
chr1	6624866	6633565	6624866	6633565	+	ENST00000054650.8@THAP3	ENST00000054650.8	protein_coding	6624866,6625150,6628499,6630288,6632391,6632796	6624954,6625292,6628691,6630353,6632495,6633565	Gene ID= ENSG00000041988.15 TPM= 22.31 Transcript Type= protein_coding
chr1	6625192	6635586	6625192	6635586	+	ENST00000377627.7@THAP3	ENST00000377627.7	protein_coding	6625192,6628499,6630288,6632370,6634020	6625292,6628691,6630353,6632495,6635586	Gene ID= ENSG00000041988.15 TPM= 2.12 Transcript Type= protein_coding
chr1	6634168	6701924	6634168	6701924	-	ENST00000377577.9@DNAJC11	ENST00000377577.9	protein_coding	6701729,6680908,6678394,6667709,6653911,6652829,6651529,6645789,6645041,6644558,6639902,6638295,6637447,6637198,6636117,6634168	6701924,6681037,6678467,6667810,6654039,6652951,6651602,6645978,6645126,6644674,6640057,6638364,6637504,6637340,6636246,6635700	Gene ID= ENSG00000007923.15 TPM= 138.08 Transcript Type= protein_coding
chr1	6783896	6785018	6783896	6785018	-	transcript782.chr1.nnic@NA	transcript782.chr1.nnic	NA	6783896	6785018	Gene ID= novel_gene_chr1_783 TPM= 5.31 Transcript Type= NA
chr1	6785480	6872038	6785480	6872038	+	ENST00000473578.5@CAMTA1	ENST00000473578.5	protein_coding	6785480,6820181,6825092,6871757	6785575,6820250,6825210,6872038	Gene ID= ENSG00000171735.18 TPM= 215.62 Transcript Type= protein_coding
chr1	6785464	6888201	6785464	6888201	+	ENST00000476163.5@CAMTA1	ENST00000476163.5	protein_coding	6785464,6825092,6871757,6887654	6785575,6825210,6871840,6888201	Gene ID= ENSG00000171735.18 TPM= 9.56 Transcript Type= processed_transcript
chr1	6785454	6872053	6785454	6872053	+	ENST00000490738.5@CAMTA1	ENST00000490738.5	protein_coding	6785454,6825092,6871757	6785575,6825210,6872053	Gene ID= ENSG00000171735.18 TPM= 54.17 Transcript Type= processed_transcript
chr1	7736408	7767856	7736408	7767856	+	ENST00000495233.5@CAMTA1	ENST00000495233.5	protein_coding	7736408,7736931,7737255,7737959,7744835,7745845,7747710,7749771,7751199,7752459,7766459	7736540,7737009,7737570,7738482,7745022,7746091,7747781,7749791,7751392,7752533,7767856	Gene ID= ENSG00000171735.18 TPM= 1.06 Transcript Type= protein_coding
chr1	7771269	7781432	7771269	7781432	+	ENST00000054666.10@VAMP3	ENST00000054666.10	protein_coding	7771269,7773442,7777160,7778118,7779626	7771385,7773511,7777318,7778169,7781432	Gene ID= ENSG00000049245.12 TPM= 122.15 Transcript Type= protein_coding
chr1	7784291	7845177	7784291	7845177	+	transcript805.chr1.nnic@PER3	transcript805.chr1.nnic	protein_coding	7784291,7784654,7785441,7786721,7788045,7793957,7798525,7801113,7803047,7803692,7808893,7809893,7810438,7819285,7820115,7820467,7826480,7827118,7829834,7829969,7835762,7836999,7842672	7784376,7785005,7785586,7786836,7788246,7794008,7798673,7801191,7803153,7803848,7808998,7810021,7810588,7819420,7820239,7820640,7826710,7827815,7829914,7830161,7835945,7837149,7845177	Gene ID= ENSG00000049246.14 TPM= 10.62 Transcript Type= NA
chr1	7784291	7810949	7784291	7810949	+	transcript806.chr1.nic@PER3	transcript806.chr1.nic	protein_coding	7784291,7784654,7785441,7786721,7788045,7793957,7798525,7801113,7803047,7803692,7808893,7809893,7810438	7784376,7785005,7785586,7786836,7788246,7794008,7798673,7801191,7803153,7803848,7808998,7810021,7810949	Gene ID= ENSG00000049246.14 TPM= 8.5 Transcript Type= NA
chr1	7784291	7788570	7784291	7788570	+	transcript810.chr1.nic@PER3	transcript810.chr1.nic	protein_coding	7784291,7784654,7785441,7786721,7788045	7784376,7785005,7785586,7786836,7788570	Gene ID= ENSG00000049246.14 TPM= 3.19 Transcript Type= NA
chr1	7804400	7805629	7804400	7805629	-	transcript811.chr1.nnic@NA	transcript811.chr1.nnic	NA	7804400	7805629	Gene ID= novel_gene_chr1_812 TPM= 2.12 Transcript Type= NA
chr1	7961663	7985279	7961663	7985279	+	ENST00000338639.9@PARK7	ENST00000338639.9	protein_coding	7961663,7962763,7965324,7969345,7970894,7977652,7984894	7961793,7962875,7965425,7969404,7970963,7977738,7985279	Gene ID= ENSG00000116288.12 TPM= 287.85 Transcript Type= protein_coding
chr1	8011719	8026308	8011719	8026308	-	ENST00000377482.9@ERRFI1	ENST00000377482.9	protein_coding	8026158,8015495,8015308,8011719	8026308,8015692,8015384,8014396	Gene ID= ENSG00000116285.12 TPM= 7.44 Transcript Type= protein_coding
chr1	8352406	8360464	8352406	8360464	-	transcript827.chr1.nic@RERE	transcript827.chr1.nic	protein_coding	8360112,8359764,8358196,8356100,8355419,8352406	8360464,8359986,8358916,8356246,8355599,8355120	Gene ID= ENSG00000142599.17 TPM= 111.53 Transcript Type= NA
chr1	8367498	8369535	8367498	8369535	+	transcript837.chr1.nnic@NA	transcript837.chr1.nnic	NA	8367498	8369535	Gene ID= novel_gene_chr1_838 TPM= 9.56 Transcript Type= NA
chr1	8813616	8817682	8813616	8817682	-	transcript839.chr1.nnic@NA	transcript839.chr1.nnic	NA	8813616	8817682	Gene ID= novel_gene_chr1_840 TPM= 5.31 Transcript Type= NA
chr1	8861002	8878740	8861002	8878740	-	transcript847.chr1.nnic@ENO1	transcript847.chr1.nnic	protein_coding	8878580,8874824,8871891,8870825,8867988,8867117,8866279,8865285,8863891,8863235,8862887,8861002	8878740,8874917,8871986,8870883,8868057,8867250,8866501,8865482,8864092,8863343,8862945,8861429	Gene ID= ENSG00000074800.13 TPM= 92.27 Transcript Type= NA
chr1	8861002	8878740	8861002	8878740	-	transcript848.chr1.nic@ENO1	transcript848.chr1.nic	protein_coding	8878580,8874824,8870452,8867988,8867117,8866279,8865285,8863891,8863235,8862887,8861002	8878740,8874917,8871986,8868057,8867250,8866501,8865482,8864092,8863343,8862945,8861429	Gene ID= ENSG00000074800.13 TPM= 32.08 Transcript Type= NA
chr1	8861002	8878690	8861002	8878690	-	ENST00000234590.8@ENO1	ENST00000234590.8	protein_coding	8878580,8874824,8871891,8870452,8867988,8867117,8866279,8865285,8863891,8863235,8862887,8861002	8878690,8874917,8871986,8870510,8868057,8867250,8866501,8865482,8864092,8863343,8862945,8861429	Gene ID= ENSG00000074800.13 TPM= 267.53 Transcript Type= protein_coding
chr1	9100305	9129170	9100305	9129170	-	ENST00000377411.4@GPR157	ENST00000377411.4	protein_coding	9128645,9111276,9105486,9100305	9129170,9111489,9105680,9104634	Gene ID= ENSG00000180758.11 TPM= 7.44 Transcript Type= protein_coding
chr1	9148286	9149357	9148286	9149357	-	transcript857.chr1.nnic@NA	transcript857.chr1.nnic	NA	9148286	9149357	Gene ID= novel_gene_chr1_858 TPM= 2.12 Transcript Type= NA
chr1	9234763	9265676	9234763	9265676	+	transcript860.chr1.nnic@H6PD	transcript860.chr1.nnic	protein_coding	9234763,9244933,9246966,9262059,9263509	9235066,9245561,9247083,9262328,9265676	Gene ID= ENSG00000049239.12 TPM= 11.68 Transcript Type= NA
chr1	9234775	9271337	9234775	9271337	+	ENST00000377403.6@H6PD	ENST00000377403.6	protein_coding	9234775,9244925,9246966,9262059,9263509	9235066,9245561,9247083,9262328,9271337	Gene ID= ENSG00000049239.12 TPM= 29.74 Transcript Type= protein_coding
chr1	9237238	9240170	9237238	9240170	-	transcript873.chr1.nnic@NA	transcript873.chr1.nnic	NA	9237238	9240170	Gene ID= novel_gene_chr1_874 TPM= 10.62 Transcript Type= NA
chr1	9292880	9369532	9292880	9369532	+	ENST00000328089.10@SPSB1	ENST00000328089.10	protein_coding	9292880,9355743,9367448	9293071,9356585,9369532	Gene ID= ENSG00000171621.13 TPM= 16.99 Transcript Type= protein_coding
chr1	9555608	9582773	9555608	9582773	+	transcript882.chr1.nnic@SLC25A33	transcript882.chr1.nnic	protein_coding	9555608,9567284,9570258,9573346,9579954,9582299	9556257,9567361,9570358,9573412,9580234,9582773	Gene ID= ENSG00000171612.6 TPM= 2.12 Transcript Type= NA
chr1	9729026	9824526	9729026	9824526	-	ENST00000377298.8@CLSTN1	ENST00000377298.8	protein_coding	9823643,9773272,9756481,9755114,9751473,9749764,9749461,9744395,9743884,9741094,9737498,9735885,9735467,9734948,9733972,9733401,9731761,9731206,9729026	9824526,9773394,9756510,9755309,9751681,9749913,9749646,9744643,9744005,9741256,9737554,9736042,9735615,9735174,9734142,9733546,9731896,9731390,9730705	Gene ID= ENSG00000171603.16 TPM= 79.66 Transcript Type= protein_coding
chr1	9848276	9910248	9848276	9910248	-	transcript891.chr1.nnic@CTNNBIP1	transcript891.chr1.nnic	protein_coding	9910095,9909208,9877905,9871969,9871187,9848276	9910248,9909384,9877989,9872088,9871277,9850776	Gene ID= ENSG00000178585.14 TPM= 6.9 Transcript Type= NA
chr1	9848276	9910263	9848276	9910263	-	ENST00000377263.5@CTNNBIP1	ENST00000377263.5	protein_coding	9910095,9883705,9877905,9871969,9871187,9848276	9910263,9883738,9877989,9872088,9871277,9850776	Gene ID= ENSG00000178585.14 TPM= 5.84 Transcript Type= protein_coding
chr1	9850109	9910336	9850109	9910336	-	ENST00000400904.7@CTNNBIP1	ENST00000400904.7	protein_coding	9910095,9877905,9871969,9871187,9850109	9910336,9877989,9872088,9871277,9850776	Gene ID= ENSG00000178585.14 TPM= 11.68 Transcript Type= protein_coding
chr1	9930253	9943407	9930253	9943407	-	ENST00000377213.1@LZIC	ENST00000377213.1	protein_coding	9943349,9942624,9936519,9935492,9934762,9932803,9931891,9930253	9943407,9942782,9936627,9935627,9934860,9932898,9931972,9930457	Gene ID= ENSG00000162441.11 TPM= 4.25 Transcript Type= protein_coding
chr1	9926392	9927791	9926392	9927791	-	transcript911.chr1.nnic@NA	transcript911.chr1.nnic	NA	9926392	9927791	Gene ID= novel_gene_chr1_912 TPM= 6.37 Transcript Type= NA
chr1	9943428	9985498	9943428	9985498	+	ENST00000377205.5@NMNAT1	ENST00000377205.5	protein_coding	9943428,9972018,9975592,9981031,9982301	9943515,9972188,9975775,9981170,9985498	Gene ID= ENSG00000173614.13 TPM= 1.06 Transcript Type= protein_coding
chr1	9997216	10016020	9997216	10016020	+	ENST00000294435.7@RBP7	ENST00000294435.7	protein_coding	9997216,10007570,10008173,10015782	9997331,10007748,10008274,10016020	Gene ID= ENSG00000162444.11 TPM= 4.25 Transcript Type= protein_coding
chr1	10210492	10306757	10210492	10306757	+	transcript930.chr1.nic@KIF1B	transcript930.chr1.nic	protein_coding	10210492,10232250,10256247,10258493,10261905,10267380,10268152,10271502,10272241,10275428,10276321,10277986,10279097,10282322,10291082,10292047,10295086,10295660,10296582,10296897,10297174,10303163	10210878,10232434,10256323,10258672,10261970,10267558,10268263,10271579,10272306,10275503,10276399,10278128,10279138,10282533,10291161,10292122,10295165,10295766,10296665,10297077,10297246,10306757	Gene ID= ENSG00000054523.17 TPM= 12.53 Transcript Type= NA
chr1	10210492	10306757	10210492	10306757	+	transcript933.chr1.nic@KIF1B	transcript933.chr1.nic	protein_coding	10210492,10232250,10256247,10258493,10261905,10267380,10268152,10271502,10272241,10275428,10276321,10277986,10279097,10282400,10291082,10292047,10295086,10295660,10296582,10296897,10297174,10303163	10210878,10232434,10256323,10258672,10261970,10267558,10268263,10271579,10272306,10275503,10276399,10278128,10279138,10282533,10291161,10292122,10295165,10295766,10296665,10297077,10297246,10306757	Gene ID= ENSG00000054523.17 TPM= 5.1 Transcript Type= NA
chr1	10210492	10306757	10210492	10306757	+	transcript938.chr1.nic@KIF1B	transcript938.chr1.nic	protein_coding	10210492,10232250,10256247,10258493,10261905,10267380,10268152,10271502,10272241,10275428,10276321,10277986,10282322,10291082,10292047,10295086,10295660,10296582,10296897,10297174,10303163	10210878,10232434,10256323,10258672,10261970,10267558,10268263,10271579,10272306,10275503,10276399,10278128,10282533,10291161,10292122,10295165,10295766,10296665,10297077,10297246,10306757	Gene ID= ENSG00000054523.17 TPM= 29.53 Transcript Type= NA
chr1	10210560	10263280	10210560	10263280	+	transcript949.chr1.nnic@KIF1B	transcript949.chr1.nnic	protein_coding	10210560,10232250,10256247,10258493,10261905,10263008	10210878,10232434,10256323,10258672,10261970,10263280	Gene ID= ENSG00000054523.17 TPM= 10.75 Transcript Type= NA
chr1	10298966	10299072	10298966	10299072	+	ENST00000362692.1@RNU6-37P	ENST00000362692.1	snRNA	10298966	10299072	Gene ID= ENSG00000199562.1 TPM= 7.44 Transcript Type= snRNA
chr1	10399080	10420144	10399080	10420144	+	ENST00000270776.12@PGD	ENST00000270776.12	protein_coding	10399080,10399629,10400393,10403071,10404161,10408071,10411418,10413062,10416987,10417376,10418826,10419417,10419630	10399125,10399704,10400572,10403136,10404279,10408140,10411552,10413251,10417117,10417509,10418925,10419539,10420144	Gene ID= ENSG00000142657.20 TPM= 28.68 Transcript Type= protein_coding
chr1	10462468	10472488	10462468	10472488	-	ENST00000377036.2@DFFA	ENST00000377036.2	protein_coding	10472323,10469177,10467190,10463431,10462468	10472488,10469338,10467332,10463620,10463209	Gene ID= ENSG00000160049.11 TPM= 1.06 Transcript Type= protein_coding
chr1	10474887	10630758	10474887	10630758	+	ENST00000356607.8@PEX14	ENST00000356607.8	protein_coding	10474887,10495274,10536213,10599238,10618332,10623019,10624340,10627272,10629531	10475002,10495321,10536297,10599366,10618417,10623121,10624437,10627363,10630758	Gene ID= ENSG00000142655.12 TPM= 6.37 Transcript Type= protein_coding
chr1	10520150	10523018	10520150	10523018	-	transcript976.chr1.nnic@NA	transcript976.chr1.nnic	NA	10520150	10523018	Gene ID= novel_gene_chr1_977 TPM= 2.12 Transcript Type= NA
chr1	10658007	10694445	10658007	10694445	-	transcript980.chr1.nic@CASZ1	transcript980.chr1.nic	protein_coding	10694297,10693874,10665083,10659702,10658007	10694445,10693912,10665571,10660536,10658576	Gene ID= ENSG00000130940.14 TPM= 2.12 Transcript Type= NA
chr1	10758329	10796641	10758329	10796641	-	transcript983.chr1.nic@CASZ1	transcript983.chr1.nic	protein_coding	10796564,10758329	10796641,10760857	Gene ID= ENSG00000130940.14 TPM= 3.19 Transcript Type= NA
chr1	10637122	10640499	10637122	10640499	-	transcript989.chr1.nnic@NA	transcript989.chr1.nnic	NA	10637122	10640499	Gene ID= novel_gene_chr1_990 TPM= 25.49 Transcript Type= NA
chr1	10642322	10642873	10642322	10642873	+	transcript985.chr1.nnic@NA	transcript985.chr1.nnic	NA	10642322	10642873	Gene ID= novel_gene_chr1_986 TPM= 6.37 Transcript Type= NA
chr1	10657998	10659797	10657998	10659797	-	transcript991.chr1.nnic@NA	transcript991.chr1.nnic	NA	10657998	10659797	Gene ID= novel_gene_chr1_992 TPM= 3.19 Transcript Type= NA
chr1	10691254	10693521	10691254	10693521	+	transcript987.chr1.nnic@NA	transcript987.chr1.nnic	NA	10691254	10693521	Gene ID= novel_gene_chr1_988 TPM= 56.29 Transcript Type= NA
chr1	11012400	11026420	11012400	11026420	+	ENST00000240185.7@TARDBP	ENST00000240185.7	protein_coding	11012400,11013716,11016844,11018733,11020429,11022124	11012743,11013965,11017007,11018873,11020599,11026420	Gene ID= ENSG00000120948.16 TPM= 114.71 Transcript Type= protein_coding
chr1	11029659	11030528	11029659	11030528	+	ENST00000607145.1@AL109811.3	ENST00000607145.1	antisense_RNA	11029659	11030528	Gene ID= ENSG00000271895.2 TPM= 2.12 Transcript Type= antisense_RNA
chr1	11054589	11060058	11054589	11060058	-	transcript1009.chr1.nic@SRM	transcript1009.chr1.nic	protein_coding	11059777,11059225,11058800,11056604,11056011,11055781,11054962,11054589	11060058,11059380,11058892,11056757,11056094,11055926,11055084,11054885	Gene ID= ENSG00000116649.9 TPM= 6.37 Transcript Type= NA
chr1	11054589	11060024	11054589	11060024	-	ENST00000376957.6@SRM	ENST00000376957.6	protein_coding	11059777,11059225,11058800,11056604,11056011,11055781,11054962,11054589	11060024,11059345,11058892,11056757,11056094,11055926,11055084,11054885	Gene ID= ENSG00000116649.9 TPM= 150.83 Transcript Type= protein_coding
chr1	11066618	11099910	11066618	11099910	-	transcript1019.chr1.nic@EXOSC10	transcript1019.chr1.nic	protein_coding	11099721,11098020,11095758,11091493,11091014,11090554,11088123,11087800,11087448,11082688,11081082,11080764,11080499,11079711,11076842,11074231,11073934,11072087,11070900,11069559,11068645,11068008,11066618	11099910,11098156,11095881,11091597,11091179,11090668,11088198,11087910,11087591,11082878,11081238,11080912,11080549,11079822,11077651,11074326,11074008,11072171,11070973,11069730,11068706,11068084,11066748	Gene ID= ENSG00000171824.13 TPM= 2.66 Transcript Type= NA
chr1	11066618	11099881	11066618	11099881	-	ENST00000376936.8@EXOSC10	ENST00000376936.8	protein_coding	11099721,11098020,11095758,11091493,11091014,11090554,11088123,11087800,11087448,11082688,11081082,11080764,11080499,11079711,11077601,11077365,11076842,11074231,11073934,11072087,11070900,11069559,11068645,11068008,11066618	11099881,11098156,11095881,11091597,11091179,11090668,11088198,11087910,11087591,11082878,11081238,11080912,11080549,11079822,11077651,11077443,11076948,11074326,11074008,11072171,11070973,11069730,11068706,11068084,11066748	Gene ID= ENSG00000171824.13 TPM= 40.89 Transcript Type= protein_coding
chr1	11106535	11262507	11106535	11262507	-	ENST00000361445.8@MTOR	ENST00000361445.8	protein_coding	11262445,11259248,11258485,11256933,11255992,11253839,11247819,11247625,11243114,11241553,11240303,11238402,11237843,11234143,11233398,11232436,11231300,11230925,11228668,11216148,11213399,11212796,11212312,11210814,11209312,11204561,11199541,11199258,11167442,11157152,11150126,11146676,11144968,11144648,11139533,11139304,11134351,11133080,11130529,11129738,11128855,11128454,11128004,11127624,11127010,11126622,11124498,11121979,11121246,11117004,11115396,11114813,11114318,11112852,11109649,11109290,11108181,11106535	11262507,11259423,11258593,11257165,11256192,11253973,11248094,11247733,11243300,11241681,11240547,11238617,11238048,11234265,11233487,11232528,11231434,11231054,11228918,11216234,11213566,11212908,11212474,11210906,11209458,11204703,11199703,11199403,11167517,11157291,11150226,11146791,11145045,11144755,11139658,11139435,11134466,11133197,11130777,11129838,11128951,11128552,11128126,11127806,11127144,11126796,11124633,11122126,11121368,11117086,11115468,11114887,11114453,11112917,11109729,11109370,11108286,11107500	Gene ID= ENSG00000198793.12 TPM= 41.42 Transcript Type= protein_coding
chr1	11189341	11195981	11189341	11195981	+	ENST00000376819.3@ANGPTL7	ENST00000376819.3	protein_coding	11189341,11192270,11193580,11194461,11194854	11189955,11192370,11193774,11194659,11195981	Gene ID= ENSG00000171819.4 TPM= 1.06 Transcript Type= protein_coding
chr1	11273206	11288434	11273206	11288434	+	ENST00000376810.5@UBIAD1	ENST00000376810.5	protein_coding	11273206,11285644	11274060,11288434	Gene ID= ENSG00000120942.13 TPM= 6.37 Transcript Type= protein_coding
chr1	11654859	11662291	11654859	11662291	+	transcript1034.chr1.nic@FBXO44	transcript1034.chr1.nic	protein_coding	11654859,11655670,11655806,11658267,11658533,11658736,11661130	11654952,11655699,11656100,11658393,11658628,11658871,11662291	Gene ID= ENSG00000132879.13 TPM= 2.84 Transcript Type= NA
chr1	11654857	11663327	11654857	11663327	+	ENST00000376770.5@FBXO44	ENST00000376770.5	protein_coding	11654857,11655328,11655806,11658267,11658533,11658736,11661130	11654952,11655699,11656100,11658393,11658628,11658871,11663327	Gene ID= ENSG00000132879.13 TPM= 3.19 Transcript Type= protein_coding
chr1	11654859	11662291	11654859	11662291	+	transcript1046.chr1.nic@FBXO44	transcript1046.chr1.nic	protein_coding	11654859,11655806,11658267,11658736,11661130	11654952,11656100,11658628,11658871,11662291	Gene ID= ENSG00000132879.13 TPM= 3.9 Transcript Type= NA
chr1	11654910	11662291	11654910	11662291	+	ENST00000376762.8@FBXO44	ENST00000376762.8	protein_coding	11654910,11655806,11658267,11658736,11661130	11654952,11656100,11658364,11658871,11662291	Gene ID= ENSG00000132879.13 TPM= 30.45 Transcript Type= protein_coding
chr1	11664307	11674354	11664307	11674354	+	transcript1044.chr1.nnic@FBXO6	transcript1044.chr1.nnic	protein_coding	11664307,11668656,11671266,11671928,11673277,11673615	11664423,11668944,11671392,11672023,11673412,11674354	Gene ID= ENSG00000116663.10 TPM= 2.12 Transcript Type= NA
chr1	11664124	11674354	11664124	11674354	+	ENST00000376753.8@FBXO6	ENST00000376753.8	protein_coding	11664124,11668656,11671266,11671928,11673277,11673615	11664255,11668944,11671392,11672023,11673412,11674354	Gene ID= ENSG00000116663.10 TPM= 11.68 Transcript Type= protein_coding
chr1	11674480	11691650	11674480	11691650	-	ENST00000235310.7@MAD2L2	ENST00000235310.7	protein_coding	11691413,11681738,11681039,11680562,11680353,11677543,11676848,11676046,11675658,11675082,11674480	11691650,11682016,11681438,11680613,11680471,11677614,11676948,11676140,11675731,11675174,11674816	Gene ID= ENSG00000116670.14 TPM= 31.33 Transcript Type= protein_coding
chr1	11674481	11681214	11674481	11681214	-	ENST00000376692.8@MAD2L2	ENST00000376692.8	protein_coding	11681039,11680562,11680353,11677543,11676848,11676046,11675658,11675082,11674481	11681214,11680613,11680471,11677614,11676948,11676140,11675731,11675174,11674816	Gene ID= ENSG00000116670.14 TPM= 21.77 Transcript Type= protein_coding
chr1	11736155	11750765	11736155	11750765	+	ENST00000314340.9@AGTRAP	ENST00000314340.9	protein_coding	11736155,11745803,11747440,11748415,11750077	11736235,11745837,11747545,11748610,11750765	Gene ID= ENSG00000177674.15 TPM= 25.49 Transcript Type= protein_coding
chr1	11736147	11750771	11736147	11750771	+	ENST00000376629.8@AGTRAP	ENST00000376629.8	protein_coding	11736147,11745803,11747440,11748415,11750077	11736235,11745837,11747545,11748589,11750771	Gene ID= ENSG00000177674.15 TPM= 5.31 Transcript Type= protein_coding
chr1	11785732	11805413	11785732	11805413	-	ENST00000376585.6@MTHFR	ENST00000376585.6	protein_coding	11805380,11803405,11802881,11801161,11800212,11796206,11795098,11794729,11794358,11793907,11792278,11791207,11785732	11805413,11804532,11803129,11801399,11800322,11796399,11795348,11794863,11794538,11794089,11792379,11791326,11790898	Gene ID= ENSG00000177000.11 TPM= 15.22 Transcript Type= protein_coding
chr1	11786603	11806920	11786603	11806920	-	ENST00000376590.8@MTHFR	ENST00000376590.8	protein_coding	11805888,11802881,11801161,11800212,11796206,11795098,11794729,11794358,11793907,11792278,11791207,11786603	11806920,11803129,11801399,11800322,11796399,11795348,11794863,11794538,11794089,11792379,11791326,11790898	Gene ID= ENSG00000177000.11 TPM= 2.47 Transcript Type= protein_coding
chr1	11785723	11805413	11785723	11805413	-	ENST00000376592.6@MTHFR	ENST00000376592.6	protein_coding	11805380,11802881,11801161,11800212,11796206,11795098,11794729,11794358,11793907,11792278,11791207,11785723	11805413,11804532,11801399,11800322,11796399,11795348,11794863,11794538,11794089,11792379,11791326,11790898	Gene ID= ENSG00000177000.11 TPM= 15.22 Transcript Type= protein_coding
chr1	11790015	11804413	11790015	11804413	-	transcript1065.chr1.nic@MTHFR	transcript1065.chr1.nic	protein_coding	11802881,11801161,11800212,11796206,11794729,11794358,11793907,11792278,11791207,11790015	11804413,11801399,11800322,11796399,11795348,11794538,11794089,11792379,11791326,11790898	Gene ID= ENSG00000177000.11 TPM= 3.19 Transcript Type= NA
chr1	11845709	11847783	11845709	11847783	-	ENST00000376480.7@NPPA	ENST00000376480.7	protein_coding	11847562,11847113,11845709	11847783,11847439,11846014	Gene ID= ENSG00000175206.10 TPM= 50152.8 Transcript Type= protein_coding
chr1	11857463	11859680	11857463	11859680	-	transcript1157.chr1.nnic@NA	transcript1157.chr1.nnic	NA	11857463	11859680	Gene ID= novel_gene_chr1_1158 TPM= 156.67 Transcript Type= NA
chr1	11857464	11858931	11857464	11858931	-	ENST00000376468.3@NPPB	ENST00000376468.3	protein_coding	11858702,11858214,11857464	11858931,11858469,11857671	Gene ID= ENSG00000120937.8 TPM= 4287.94 Transcript Type= protein_coding
chr1	11919591	11921165	11919591	11921165	-	transcript1169.chr1.nnic@NA	transcript1169.chr1.nnic	NA	11919591	11921165	Gene ID= novel_gene_chr1_1170 TPM= 8.5 Transcript Type= NA
chr1	11919591	11926423	11919591	11926423	-	ENST00000376572.7@KIAA2013	ENST00000376572.7	protein_coding	11925205,11922636,11919591	11926423,11923489,11920332	Gene ID= ENSG00000116685.15 TPM= 123.21 Transcript Type= protein_coding
chr1	11922175	11926428	11922175	11926428	-	ENST00000376576.3@KIAA2013	ENST00000376576.3	protein_coding	11925205,11922175	11926428,11923489	Gene ID= ENSG00000116685.15 TPM= 28.68 Transcript Type= protein_coding
chr1	11934753	11975537	11934753	11975537	+	ENST00000196061.4@PLOD1	ENST00000196061.4	protein_coding	11934753,11947976,11949773,11950357,11952623,11954830,11956917,11957842,11958516,11960646,11963532,11964175,11964644,11965480,11966251,11966987,11970670,11972872,11974653	11934855,11948067,11949906,11950520,11952735,11954893,11957014,11957943,11958647,11960767,11963636,11964300,11964785,11965593,11966316,11967091,11970816,11972997,11975537	Gene ID= ENSG00000083444.16 TPM= 74.35 Transcript Type= protein_coding
chr1	11980181	12013514	11980181	12013514	+	ENST00000444836.5@MFN2	ENST00000444836.5	protein_coding	11980181,11989165,11992555,11996156,11997297,11998770,11998988,12001401,12001769,12001982,12003992,12004509,12004825,12005711,12006538,12007053,12009592,12011496	11980484,11989343,11992690,11996318,11997421,11998878,11999095,12001554,12001836,12002103,12004118,12004613,12004927,12005931,12006693,12007249,12009726,12013514	Gene ID= ENSG00000116688.16 TPM= 91.42 Transcript Type= protein_coding
chr1	11980312	12013508	11980312	12013508	+	ENST00000235329.9@MFN2	ENST00000235329.9	protein_coding	11980312,11981970,11989165,11992555,11996156,11997297,11998770,11998988,12001401,12001769,12001982,12003992,12004509,12004825,12005711,12006538,12007053,12009592,12011496	11980484,11982114,11989343,11992690,11996318,11997421,11998878,11999095,12001554,12001836,12002103,12004118,12004613,12004927,12005931,12006693,12007249,12009726,12013508	Gene ID= ENSG00000116688.16 TPM= 373.95 Transcript Type= protein_coding
chr1	11981922	11985439	11981922	11985439	-	transcript1213.chr1.nnic@NA	transcript1213.chr1.nnic	NA	11981922	11985439	Gene ID= novel_gene_chr1_1214 TPM= 9.56 Transcript Type= NA
chr1	11988405	11989343	11988405	11989343	-	transcript1215.chr1.nnic@NA	transcript1215.chr1.nnic	NA	11988405	11989343	Gene ID= novel_gene_chr1_1216 TPM= 5.31 Transcript Type= NA
chr1	12019466	12032045	12019466	12032045	+	ENST00000235332.5@MIIP	ENST00000235332.5	protein_coding	12019466,12021645,12022095,12022833,12029033,12029223,12029765,12030028,12031266,12031722	12019552,12021840,12022442,12022917,12029141,12029281,12029894,12030124,12031403,12032045	Gene ID= ENSG00000116691.10 TPM= 53.99 Transcript Type= protein_coding
chr1	12019479	12032039	12019479	12032039	+	transcript1222.chr1.nic@MIIP	transcript1222.chr1.nic	protein_coding	12019479,12021645,12022095,12022833,12029033,12029223,12030028,12031266,12031722	12019552,12021840,12022442,12022917,12029141,12029894,12030124,12031403,12032039	Gene ID= ENSG00000116691.10 TPM= 7.25 Transcript Type= NA
chr1	12019479	12032039	12019479	12032039	+	transcript1225.chr1.nic@MIIP	transcript1225.chr1.nic	protein_coding	12019479,12021645,12022095,12022833,12029033,12029223,12031266,12031722	12019552,12021840,12022442,12022917,12029141,12030124,12031403,12032039	Gene ID= ENSG00000116691.10 TPM= 2.47 Transcript Type= NA
chr1	12125899	12144207	12125899	12144207	+	ENST00000413146.6@TNFRSF8	ENST00000413146.6	protein_coding	12125899,12126183,12135588,12138229,12142287	12126052,12126236,12135613,12138436,12144207	Gene ID= ENSG00000120949.14 TPM= 2.12 Transcript Type= protein_coding
chr1	12167003	12209228	12167003	12209228	+	ENST00000376259.6@TNFRSF1B	ENST00000376259.6	protein_coding	12167003,12188796,12190957,12191774,12192431,12192863,12193955,12194584,12201967,12206740	12167169,12188895,12191085,12191923,12192524,12193098,12194032,12194618,12202171,12209228	Gene ID= ENSG00000028137.18 TPM= 33.99 Transcript Type= protein_coding
chr1	12230032	12235598	12230032	12235598	+	transcript1241.chr1.nic@VPS13D	transcript1241.chr1.nic	protein_coding	12230032,12234191	12230120,12235598	Gene ID= ENSG00000048707.13 TPM= 2.12 Transcript Type= NA
chr1	12567983	12617815	12567983	12617815	-	transcript1247.chr1.nnic@DHRS3	transcript1247.chr1.nnic	protein_coding	12617154,12580521,12579293,12578718,12572728,12567983	12617815,12580666,12579412,12578956,12572853,12568424	Gene ID= ENSG00000162496.8 TPM= 42.49 Transcript Type= NA
chr1	12567910	12600488	12567910	12600488	-	transcript1248.chr1.nnic@DHRS3	transcript1248.chr1.nnic	protein_coding	12600361,12580523,12579293,12578718,12572728,12567910	12600488,12580666,12579412,12578956,12572853,12568424	Gene ID= ENSG00000162496.8 TPM= 4.25 Transcript Type= NA
chr1	12567910	12616749	12567910	12616749	-	transcript1249.chr1.nic@DHRS3	transcript1249.chr1.nic	protein_coding	12616560,12580523,12579293,12578718,12572728,12567910	12616749,12580666,12579412,12578956,12572853,12568424	Gene ID= ENSG00000162496.8 TPM= 5.31 Transcript Type= NA
chr1	12567910	12617731	12567910	12617731	-	ENST00000616661.4@DHRS3	ENST00000616661.4	protein_coding	12617154,12580523,12579293,12578718,12572728,12567910	12617731,12580666,12579412,12578956,12572853,12568424	Gene ID= ENSG00000162496.8 TPM= 81.79 Transcript Type= protein_coding
chr1	13487825	13489832	13487825	13489832	+	transcript1255.chr1.nnic@NA	transcript1255.chr1.nnic	NA	13487825,13488739,13489460	13487872,13488841,13489832	Gene ID= novel_gene_chr1_1256 TPM= 2.12 Transcript Type= NA
chr1	13583465	13617957	13583465	13617957	+	ENST00000294489.10@PDPN	ENST00000294489.10	protein_coding	13583465,13607173,13610387,13613687,13614300,13615905	13584100,13607306,13610516,13613725,13614411,13617957	Gene ID= ENSG00000162493.16 TPM= 6.9 Transcript Type= protein_coding
chr1	13583762	13617957	13583762	13617957	+	ENST00000376057.8@PDPN	ENST00000376057.8	protein_coding	13583762,13607173,13610387,13613687,13614300,13615905	13584100,13607306,13610516,13613725,13614405,13617957	Gene ID= ENSG00000162493.16 TPM= 2.66 Transcript Type= protein_coding
chr1	13704855	13788059	13704855	13788059	+	ENST00000311066.9@PRDM2	ENST00000311066.9	protein_coding	13704855,13715541,13731000,13732779,13742005,13749361,13773078,13778418,13786515	13705645,13715614,13731117,13732882,13742157,13749487,13773188,13782831,13788059	Gene ID= ENSG00000116731.22 TPM= 3.98 Transcript Type= protein_coding
chr1	13749415	13787657	13749415	13787657	+	ENST00000343137.8@PRDM2	ENST00000343137.8	protein_coding	13749415,13769118,13773078,13778418,13786515	13749487,13769173,13773188,13782831,13787657	Gene ID= ENSG00000116731.22 TPM= 8.23 Transcript Type= protein_coding
chr1	13704855	13825079	13704855	13825079	+	ENST00000235372.11@PRDM2	ENST00000235372.11	protein_coding	13704855,13715541,13731000,13732779,13742005,13749361,13773078,13778418,13816427,13823159	13705645,13715614,13731117,13732882,13742157,13749487,13773188,13782831,13816570,13825079	Gene ID= ENSG00000116731.22 TPM= 8.23 Transcript Type= protein_coding
chr1	13749403	13788079	13749403	13788079	+	ENST00000413440.5@PRDM2	ENST00000413440.5	protein_coding	13749403,13773078,13778418,13786515	13749487,13773188,13782831,13788079	Gene ID= ENSG00000116731.22 TPM= 7.17 Transcript Type= protein_coding
chr1	15153733	15220408	15153733	15220408	+	ENST00000400796.7@TMEM51	ENST00000400796.7	protein_coding	15153733,15214895,15219326	15153954,15215431,15220408	Gene ID= ENSG00000171729.13 TPM= 1.06 Transcript Type= protein_coding
chr1	15409874	15430205	15409874	15430205	+	transcript1277.chr1.nnic@EFHD2	transcript1277.chr1.nnic	protein_coding	15409874,15425871,15427150,15428593,15430034	15410279,15426018,15427284,15428764,15430205	Gene ID= ENSG00000142634.12 TPM= 4.25 Transcript Type= NA
chr1	15409895	15430343	15409895	15430343	+	ENST00000375980.8@EFHD2	ENST00000375980.8	protein_coding	15409895,15425871,15427150,15428593	15410279,15426018,15427284,15430343	Gene ID= ENSG00000142634.12 TPM= 19.12 Transcript Type= protein_coding
chr1	15526813	15571733	15526813	15571733	+	ENST00000375847.7@DNAJC16	ENST00000375847.7	protein_coding	15526813,15529088,15534237,15536475,15544399,15546767,15548270,15559526,15562142,15563929,15564283,15565919,15566082,15567099,15567778	15526958,15529272,15534303,15536814,15544583,15546871,15548428,15559656,15562325,15564111,15564359,15565999,15566180,15567269,15571733	Gene ID= ENSG00000116138.12 TPM= 5.31 Transcript Type= protein_coding
chr1	15617421	15662031	15617421	15662031	+	transcript1293.chr1.nnic@DDI2	transcript1293.chr1.nnic	protein_coding	15617421,15626669,15630325,15633439,15638307,15643522,15649720,15651706,15659837	15617808,15626798,15630561,15633565,15638434,15643650,15649823,15651895,15662031	Gene ID= ENSG00000197312.11 TPM= 6.37 Transcript Type= NA
chr1	15684283	15725546	15684283	15725546	+	transcript1311.chr1.nic@PLEKHM2	transcript1311.chr1.nic	protein_coding	15684283,15716237,15716707,15717893,15718538,15719734,15721329,15725317	15684618,15716343,15716816,15717992,15718625,15719920,15721388,15725546	Gene ID= ENSG00000116786.11 TPM= 11.68 Transcript Type= NA
chr1	15684332	15734769	15684332	15734769	+	ENST00000375799.7@PLEKHM2	ENST00000375799.7	protein_coding	15684332,15716237,15716707,15717893,15718538,15719734,15721329,15725317,15727014,15728079,15728267,15728669,15729102,15729797,15730532,15731192,15731889,15732350,15732612,15733797	15684618,15716343,15716816,15717992,15718625,15719920,15721388,15725545,15727832,15728148,15728357,15728733,15729190,15729929,15730722,15731257,15732048,15732529,15732728,15734769	Gene ID= ENSG00000116786.11 TPM= 93.39 Transcript Type= protein_coding
chr1	15756659	15786594	15756659	15786594	+	ENST00000375771.5@FBLIM1	ENST00000375771.5	protein_coding	15756659,15758174,15764493,15764964,15767376,15768528,15770409,15774618,15777170,15784548	15756732,15758329,15764685,15765233,15767563,15768630,15770578,15774796,15777287,15786594	Gene ID= ENSG00000162458.12 TPM= 11.33 Transcript Type= protein_coding
chr1	15758741	15785329	15758741	15785329	+	transcript1314.chr1.nic@FBLIM1	transcript1314.chr1.nic	protein_coding	15758741,15764493,15764964,15767376,15768528,15770409,15774618,15777170,15784548	15758848,15764547,15765233,15767563,15768630,15770578,15774796,15777287,15785329	Gene ID= ENSG00000162458.12 TPM= 2.12 Transcript Type= NA
chr1	15758419	15786594	15758419	15786594	+	ENST00000375766.7@FBLIM1	ENST00000375766.7	protein_coding	15758419,15764496,15764964,15767376,15768528,15770409,15774618,15777170,15784548	15758848,15764685,15765233,15767563,15768630,15770578,15774796,15777287,15786594	Gene ID= ENSG00000162458.12 TPM= 17.71 Transcript Type= protein_coding
chr1	15758745	15786594	15758745	15786594	+	transcript1328.chr1.nic@FBLIM1	transcript1328.chr1.nic	protein_coding	15758745,15764496,15764964,15770409,15774618,15777170,15784548	15758848,15764685,15765233,15770578,15774796,15777287,15786594	Gene ID= ENSG00000162458.12 TPM= 11.33 Transcript Type= NA
chr1	15834210	15835864	15834210	15835864	-	transcript1332.chr1.nnic@NA	transcript1332.chr1.nnic	NA	15834210	15835864	Gene ID= novel_gene_chr1_1333 TPM= 7.44 Transcript Type= NA
chr1	15847802	15928603	15847802	15928603	+	transcript1336.chr1.nic@SPEN	transcript1336.chr1.nic	protein_coding	15847802,15872816,15876202,15909321,15911101,15916128,15918926,15919404,15920870,15922249,15928091	15848150,15873136,15876678,15909481,15911301,15916279,15919051,15919517,15920983,15922349,15928603	Gene ID= ENSG00000065526.10 TPM= 6.37 Transcript Type= NA
chr1	15847864	15940460	15847864	15940460	+	ENST00000375759.7@SPEN	ENST00000375759.7	protein_coding	15847864,15872816,15876202,15909321,15911101,15916128,15918926,15919404,15920870,15922249,15928091,15937163,15937812,15938718,15939296	15848150,15873136,15876678,15909481,15911301,15916279,15919051,15919517,15920983,15922349,15936266,15937645,15938006,15938876,15940460	Gene ID= ENSG00000065526.10 TPM= 23.37 Transcript Type= protein_coding
chr1	15941869	15976126	15941869	15976126	-	ENST00000375743.8@ZBTB17	ENST00000375743.8	protein_coding	15975983,15973039,15948291,15946935,15946154,15945715,15944937,15944697,15944300,15943808,15943599,15943399,15943064,15942529,15942331,15941869	15976126,15973125,15948497,15947123,15946294,15945840,15945202,15944839,15944600,15943895,15943715,15943519,15943194,15942738,15942420,15942252	Gene ID= ENSG00000116809.11 TPM= 30.27 Transcript Type= protein_coding
chr1	15941871	15976132	15941871	15976132	-	ENST00000375733.6@ZBTB17	ENST00000375733.6	protein_coding	15975983,15973039,15948291,15946935,15946154,15945715,15944937,15944697,15944300,15943808,15943599,15943399,15943064,15942529,15942331,15941871	15976132,15973125,15948497,15947123,15946294,15945840,15945202,15944839,15944600,15943895,15943715,15943519,15943194,15942738,15942441,15942252	Gene ID= ENSG00000116809.11 TPM= 1.06 Transcript Type= protein_coding
chr1	15941869	15976122	15941869	15976122	-	transcript1345.chr1.nic@ZBTB17	transcript1345.chr1.nic	protein_coding	15975983,15973039,15948291,15946935,15946154,15945715,15944937,15944697,15944300,15943599,15943399,15943064,15942529,15942331,15941869	15976122,15973125,15948497,15947123,15946294,15945840,15945202,15944839,15944600,15943895,15943519,15943194,15942738,15942420,15942252	Gene ID= ENSG00000116809.11 TPM= 4.78 Transcript Type= NA
chr1	16014028	16017742	16014028	16017742	-	transcript1386.chr1.nnic@NA	transcript1386.chr1.nnic	NA	16014028	16017742	Gene ID= novel_gene_chr1_1387 TPM= 32.93 Transcript Type= NA
chr1	16014028	16019594	16014028	16019594	-	ENST00000375718.4@HSPB7	ENST00000375718.4	protein_coding	16019134,16017765,16017074,16014028	16019594,16017852,16017207,16015759	Gene ID= ENSG00000173641.17 TPM= 375.38 Transcript Type= protein_coding
chr1	16014028	16018790	16014028	16018790	-	ENST00000311890.13@HSPB7	ENST00000311890.13	protein_coding	16017765,16017074,16014028	16018790,16017207,16015759	Gene ID= ENSG00000173641.17 TPM= 1468.34 Transcript Type= protein_coding
chr1	16014028	16018043	16014028	16018043	-	ENST00000442459.2@HSPB7	ENST00000442459.2	protein_coding	16017074,16014028	16018043,16015759	Gene ID= ENSG00000173641.17 TPM= 410.16 Transcript Type= retained_intron
chr1	16014028	16018041	16014028	16018041	-	ENST00000411503.5@HSPB7	ENST00000411503.5	protein_coding	16017765,16017089,16014028	16018041,16017207,16015759	Gene ID= ENSG00000173641.17 TPM= 353.58 Transcript Type= protein_coding
chr1	16015499	16018005	16015499	16018005	-	ENST00000406363.2@HSPB7	ENST00000406363.2	protein_coding	16017765,16017074,16015499	16018005,16017219,16015759	Gene ID= ENSG00000173641.17 TPM= 4.25 Transcript Type= protein_coding
chr1	16048789	16057308	16048789	16057308	+	ENST00000375667.7@CLCNKB	ENST00000375667.7	protein_coding	16048789,16049618,16049815,16050516,16050875,16051478,16051710,16052198,16053639,16055435,16055678,16056422,16056869	16049245,16049702,16049916,16050600,16051048,16051547,16051820,16052411,16053772,16055523,16055758,16056508,16057308	Gene ID= ENSG00000184908.17 TPM= 1.06 Transcript Type= protein_coding
chr1	16043777	16057308	16043777	16057308	+	ENST00000375679.8@CLCNKB	ENST00000375679.8	protein_coding	16043777,16044486,16045558,16046535,16047905,16048343,16048504,16049120,16049618,16049815,16050516,16050875,16051478,16051710,16052198,16053639,16055435,16055675,16056422,16056869	16043880,16044592,16045686,16046663,16048044,16048420,16048582,16049245,16049702,16049916,16050600,16051048,16051547,16051820,16052411,16053772,16055523,16055758,16056508,16057308	Gene ID= ENSG00000184908.17 TPM= 2.12 Transcript Type= protein_coding
chr1	16057769	16073626	16057769	16073626	-	ENST00000375662.4@FAM131C	ENST00000375662.4	protein_coding	16073421,16063521,16062499,16062099,16059869,16059494,16057769	16073626,16063636,16062534,16062192,16060051,16059604,16058717	Gene ID= ENSG00000185519.8 TPM= 14.87 Transcript Type= protein_coding
chr1	16124335	16129550	16124335	16129550	-	transcript1404.chr1.nnic@NA	transcript1404.chr1.nnic	NA	16124335	16129550	Gene ID= novel_gene_chr1_1405 TPM= 4.96 Transcript Type= NA
chr1	16124337	16156087	16124337	16156087	-	ENST00000358432.7@EPHA2	ENST00000358432.7	protein_coding	16155848,16150896,16148378,16138275,16137853,16135655,16135036,16134468,16133860,16133481,16133180,16132378,16132064,16131721,16130226,16129434,16124337	16156087,16150963,16149047,16138430,16138185,16135770,16135189,16134567,16133915,16133606,16133368,16132439,16132273,16131870,16130419,16129589,16125320	Gene ID= ENSG00000142627.12 TPM= 16.64 Transcript Type= protein_coding
chr1	16124337	16151398	16124337	16151398	-	transcript1403.chr1.nic@EPHA2	transcript1403.chr1.nic	protein_coding	16150896,16148378,16138275,16137853,16135655,16135036,16134468,16133860,16133481,16133180,16132378,16132064,16131721,16130226,16129434,16124337	16151398,16149047,16138430,16138185,16135770,16135189,16134567,16133915,16133606,16133368,16132439,16132273,16131870,16130419,16129589,16125320	Gene ID= ENSG00000142627.12 TPM= 15.58 Transcript Type= NA
chr1	16229381	16231349	16229381	16231349	+	transcript1433.chr1.nnic@NA	transcript1433.chr1.nnic	NA	16229381	16231349	Gene ID= novel_gene_chr1_1434 TPM= 100.91 Transcript Type= NA
chr1	16231700	16237162	16231700	16237162	-	ENST00000375599.7@RSG1	ENST00000375599.7	protein_coding	16236631,16233612,16232893,16232510,16231700	16237162,16233764,16233017,16232646,16232297	Gene ID= ENSG00000132881.11 TPM= 4.25 Transcript Type= protein_coding
chr1	16250399	16352483	16250399	16352483	-	transcript1412.chr1.nnic@FBXO42	transcript1412.chr1.nnic	protein_coding	16352255,16315169,16305803,16294783,16261001,16256606,16255711,16253635,16253096,16252288,16250399	16352483,16315435,16305919,16294917,16261166,16256759,16255821,16253731,16253152,16252404,16251785	Gene ID= ENSG00000037637.10 TPM= 3.19 Transcript Type= NA
chr1	16250501	16352483	16250501	16352483	-	transcript1414.chr1.nnic@FBXO42	transcript1414.chr1.nnic	protein_coding	16352255,16316437,16315169,16305803,16294783,16256606,16255711,16253635,16253096,16252288,16250501	16352483,16316568,16315435,16305919,16294917,16256759,16255821,16253731,16253152,16252404,16251785	Gene ID= ENSG00000037637.10 TPM= 2.12 Transcript Type= NA
chr1	16246839	16352454	16246839	16352454	-	ENST00000375592.7@FBXO42	ENST00000375592.7	protein_coding	16352255,16315169,16305803,16294783,16256606,16255711,16253635,16253096,16252288,16246839	16352454,16315435,16305919,16294917,16256759,16255821,16253731,16253152,16252404,16251785	Gene ID= ENSG00000037637.10 TPM= 4.25 Transcript Type= protein_coding
chr1	16367225	16398145	16367225	16398145	+	ENST00000401089.3@SZRD1	ENST00000401089.3	protein_coding	16367225,16393228,16395038	16367308,16393482,16398145	Gene ID= ENSG00000055070.16 TPM= 35.58 Transcript Type= protein_coding
chr1	16367265	16398142	16367265	16398142	+	ENST00000492354.1@SZRD1	ENST00000492354.1	protein_coding	16367265,16393231,16395038	16367308,16393482,16398142	Gene ID= ENSG00000055070.16 TPM= 29.21 Transcript Type= protein_coding
chr1	16440672	16460078	16440672	16460078	+	ENST00000337132.9@NECAP2	ENST00000337132.9	protein_coding	16440672,16443632,16447870,16448060,16449093,16451838,16455818,16458842	16440853,16443732,16447974,16448141,16449201,16452015,16455893,16460078	Gene ID= ENSG00000157191.19 TPM= 31.86 Transcript Type= protein_coding
chr1	16440725	16441609	16440725	16441609	+	transcript1454.chr1.nnic@NA	transcript1454.chr1.nnic	NA	16440725	16441609	Gene ID= novel_gene_chr1_1455 TPM= 3.19 Transcript Type= NA
chr1	16594003	16613587	16594003	16613587	-	transcript1465.chr1.nic@NBPF1	transcript1465.chr1.nic	protein_coding	16613338,16608508,16594931,16594003	16613587,16608779,16595013,16594661	Gene ID= ENSG00000219481.10 TPM= 3.19 Transcript Type= NA
chr1	16599603	16603049	16599603	16603049	-	ENST00000599908.1@NBPF1	ENST00000599908.1	protein_coding	16599603	16603049	Gene ID= ENSG00000219481.10 TPM= 1.06 Transcript Type= processed_transcript
chr1	16605406	16613534	16605406	16613534	-	ENST00000449853.2@NBPF1	ENST00000449853.2	protein_coding	16613338,16608508,16605406	16613534,16608779,16607691	Gene ID= ENSG00000219481.10 TPM= 1.06 Transcript Type= processed_transcript
chr1	16618256	16644704	16618256	16644704	-	transcript1473.chr1.nnic@CROCCP2	transcript1473.chr1.nnic	transcribed_unprocessed_pseudogene	16644646,16635027,16633095,16632275,16631530,16630890,16628468,16627145,16626353,16625775,16619845,16618256	16644704,16635168,16633346,16632371,16631613,16631109,16628650,16627289,16626499,16626005,16620024,16619103	Gene ID= ENSG00000215908.10 TPM= 3.19 Transcript Type= NA
chr1	16635031	16644715	16635031	16644715	-	transcript1479.chr1.nic@CROCCP2	transcript1479.chr1.nic	transcribed_unprocessed_pseudogene	16644646,16643028,16642767,16635031	16644715,16643145,16642850,16635168	Gene ID= ENSG00000215908.10 TPM= 2.12 Transcript Type= NA
chr1	16618256	16621635	16618256	16621635	-	transcript1480.chr1.nic@CROCCP2	transcript1480.chr1.nic	transcribed_unprocessed_pseudogene	16619845,16618256	16621635,16619103	Gene ID= ENSG00000215908.10 TPM= 7.44 Transcript Type= NA
chr1	16888542	16889649	16888542	16889649	-	ENST00000457075.1@BX284668.5	ENST00000457075.1	lincRNA	16889548,16888542	16889649,16888785	Gene ID= ENSG00000238142.1 TPM= 1.06 Transcript Type= lincRNA
chr1	16974502	16980835	16974502	16980835	-	ENST00000375535.3@MFAP2	ENST00000375535.3	protein_coding	16980587,16978237,16977109,16976897,16976708,16976501,16975643,16975269,16974502	16980835,16978314,16977198,16976923,16976794,16976545,16975730,16975342,16975023	Gene ID= ENSG00000117122.13 TPM= 9.56 Transcript Type= protein_coding
chr1	16974502	16980657	16974502	16980657	-	transcript1493.chr1.nic@MFAP2	transcript1493.chr1.nic	protein_coding	16980587,16978237,16977109,16976708,16975643,16975269,16974502	16980657,16978314,16977198,16976923,16976545,16975342,16975023	Gene ID= ENSG00000117122.13 TPM= 2.12 Transcript Type= NA
chr1	16985958	17011928	16985958	17011928	-	ENST00000452699.5@ATP13A2	ENST00000452699.5	protein_coding	17011729,17005684,17005374,17005014,17004707,17004332,17002296,17002034,17000400,17000246,17000011,16997020,16996386,16996254,16995976,16993629,16992486,16992243,16992009,16991734,16990127,16989887,16989691,16988322,16988138,16987046,16986805,16986463,16985958	17011928,17005778,17005556,17005072,17004821,17004411,17002373,17002103,17000534,17000312,17000142,16997175,16996496,16996300,16996164,16993835,16992581,16992402,16992129,16991858,16990287,16990003,16989770,16988474,16988234,16987269,16986956,16986632,16986358	Gene ID= ENSG00000159363.17 TPM= 5.31 Transcript Type= protein_coding
chr1	17018722	17054170	17018722	17054170	-	ENST00000375499.7@SDHB	ENST00000375499.7	protein_coding	17053948,17044761,17033060,17028600,17027749,17023973,17022608,17018722	17054170,17044888,17033145,17028736,17027865,17024074,17022730,17018958	Gene ID= ENSG00000117118.9 TPM= 342.02 Transcript Type= protein_coding
chr1	17347927	17356447	17347927	17356447	+	ENST00000487048.5@PADI4	ENST00000487048.5	protein_coding	17347927,17354533,17355983,17356357	17348048,17354687,17356127,17356447	Gene ID= ENSG00000159339.13 TPM= 1.06 Transcript Type= processed_transcript
chr1	17406760	17439724	17406760	17439724	-	ENST00000375436.8@RCC2	ENST00000375436.8	protein_coding	17439545,17438230,17429106,17425541,17422705,17422203,17420714,17416480,17413537,17413073,17412122,17409974,17406760	17439724,17438522,17429199,17425684,17422836,17422291,17420828,17416646,17413717,17413178,17412194,17410051,17409194	Gene ID= ENSG00000179051.13 TPM= 9.56 Transcript Type= protein_coding
chr1	17539682	17697869	17539682	17697869	+	transcript1518.chr1.nic@ARHGEF10L	transcript1518.chr1.nic	protein_coding	17539682,17580553,17587460,17588446,17602127,17603508,17607802,17616094,17619339,17621864,17622996,17624387,17625956,17627330,17632321,17634548,17634835,17637888,17638562,17640202,17648554,17654636,17655879,17656554,17664447,17687573,17695158,17696848	17539950,17580632,17587645,17588479,17602218,17603591,17607977,17616202,17619445,17621941,17623175,17624503,17626048,17627503,17632466,17634562,17635016,17638003,17638689,17640302,17648675,17654722,17656102,17656708,17664595,17687747,17695280,17697869	Gene ID= ENSG00000074964.16 TPM= 42.4 Transcript Type= NA
chr1	17588389	17697869	17588389	17697869	+	transcript1521.chr1.nic@ARHGEF10L	transcript1521.chr1.nic	protein_coding	17588389,17602127,17603508,17607802,17616094,17619339,17621864,17622996,17624387,17625956,17627330,17632321,17634548,17634835,17637888,17638562,17640202,17648554,17654636,17655879,17656554,17664447,17687573,17695158,17696848	17588479,17602218,17603591,17607977,17616202,17619445,17621941,17623175,17624503,17626048,17627503,17632466,17634562,17635016,17638003,17638689,17640302,17648675,17654722,17656102,17656708,17664595,17687747,17695280,17697869	Gene ID= ENSG00000074964.16 TPM= 20.1 Transcript Type= NA
chr1	17618342	17697869	17618342	17697869	+	transcript1523.chr1.nic@ARHGEF10L	transcript1523.chr1.nic	protein_coding	17618342,17619339,17621864,17622996,17624387,17625956,17627330,17632321,17634548,17634835,17637888,17638562,17640202,17648554,17654636,17655879,17656554,17664447,17687573,17695158,17696848	17618522,17619445,17621941,17623175,17624503,17626048,17627503,17632466,17634562,17635016,17638003,17638689,17640302,17648675,17654722,17656102,17656708,17664595,17687747,17695280,17697869	Gene ID= ENSG00000074964.16 TPM= 23.28 Transcript Type= NA
chr1	17618316	17697868	17618316	17697868	+	ENST00000375408.7@ARHGEF10L	ENST00000375408.7	protein_coding	17618316,17619339,17621864,17622996,17624387,17625956,17627330,17632321,17634835,17637888,17638562,17640202,17648554,17654636,17655879,17656554,17664447,17687573,17695158,17696848	17618522,17619445,17621941,17623175,17624503,17626048,17627503,17632466,17635016,17638003,17638689,17640302,17648675,17654722,17656102,17656708,17664595,17687747,17695280,17697868	Gene ID= ENSG00000074964.16 TPM= 43.81 Transcript Type= protein_coding
chr1	17618342	17623825	17618342	17623825	+	transcript1540.chr1.nic@ARHGEF10L	transcript1540.chr1.nic	protein_coding	17618342,17619339,17621864,17622996	17618522,17619445,17621941,17623825	Gene ID= ENSG00000074964.16 TPM= 3.19 Transcript Type= NA
chr1	17539686	17542148	17539686	17542148	+	transcript1542.chr1.nnic@NA	transcript1542.chr1.nnic	NA	17539686	17542148	Gene ID= novel_gene_chr1_1543 TPM= 2.12 Transcript Type= NA
chr1	17610953	17612776	17610953	17612776	-	transcript1544.chr1.nnic@NA	transcript1544.chr1.nnic	NA	17610953	17612776	Gene ID= novel_gene_chr1_1545 TPM= 2.12 Transcript Type= NA
chr1	18107746	18378482	18107746	18378482	+	ENST00000251296.3@IGSF21	ENST00000251296.3	protein_coding	18107746,18227898,18291866,18334892,18362115,18365223,18376310,18376800,18377393,18378256	18108198,18228010,18291987,18335010,18362230,18365697,18376395,18376992,18377431,18378482	Gene ID= ENSG00000117154.11 TPM= 2.12 Transcript Type= protein_coding
chr1	18871432	18902781	18871432	18902781	-	ENST00000375341.7@ALDH4A1	ENST00000375341.7	protein_coding	18902462,18890012,18889362,18886464,18885473,18883279,18883124,18881700,18879300,18877416,18877208,18876315,18875382,18874463,18871432	18902781,18890105,18889454,18886511,18885628,18883428,18883198,18881887,18879373,18877612,18877255,18876467,18875503,18874581,18872957	Gene ID= ENSG00000159423.16 TPM= 152.42 Transcript Type= protein_coding
chr1	18871430	18902553	18871430	18902553	-	ENST00000290597.9@ALDH4A1	ENST00000290597.9	protein_coding	18902462,18890012,18889362,18886464,18885473,18883279,18883124,18881700,18879300,18877416,18877208,18876315,18875382,18874463,18872804,18871430	18902553,18890105,18889454,18886511,18885628,18883428,18883198,18881887,18879373,18877612,18877255,18876467,18875503,18874581,18872957,18871790	Gene ID= ENSG00000159423.16 TPM= 15.4 Transcript Type= protein_coding
chr1	19074506	19210276	19074506	19210276	-	ENST00000375254.7@UBR4	ENST00000375254.7	protein_coding	19210073,19201718,19199651,19198799,19198541,19197947,19197670,19197141,19193433,19192481,19192188,19187441,19187164,19186540,19185099,19184016,19183811,19179051,19177461,19176592,19174954,19174319,19173439,19173181,19172864,19170762,19169435,19168027,19167022,19165656,19165249,19164799,19164253,19163764,19162420,19161827,19161589,19160917,19160111,19157815,19156767,19156271,19155441,19154918,19153768,19153301,19152313,19151643,19150577,19148563,19147993,19146826,19145793,19144786,19143980,19141647,19141347,19140788,19139083,19138007,19128978,19128211,19127623,19126446,19124541,19122833,19121934,19121189,19120180,19119557,19118872,19117823,19117221,19115398,19114811,19113945,19113699,19112524,19110742,19110380,19110096,19106837,19106569,19105733,19105048,19104585,19104084,19101520,19100376,19099597,19097193,19096523,19095545,19094906,19093949,19093313,19092819,19088759,19087816,19086679,19086145,19084504,19081349,19077976,19076740,19074506	19210276,19201815,19199754,19198928,19198680,19198049,19197811,19197265,19193557,19192540,19192378,19187540,19187301,19186657,19185286,19184175,19183896,19179220,19177743,19176727,19175033,19174447,19173621,19173306,19173093,19170883,19169532,19168184,19167231,19165757,19165349,19164997,19164441,19163827,19162611,19161897,19161736,19161147,19160281,19157997,19156925,19156423,19155668,19155075,19153939,19153502,19152476,19151859,19150793,19148626,19148127,19147000,19145933,19144907,19144091,19141777,19141524,19140892,19139220,19138181,19129074,19128318,19127739,19126655,19124690,19123060,19122012,19121434,19120348,19119701,19118957,19117910,19117414,19115637,19114949,19114070,19113827,19112867,19110832,19110464,19110223,19106966,19106726,19105842,19105189,19104666,19104257,19101641,19100573,19099677,19097280,19096650,19095652,19095025,19094139,19093486,19092918,19088977,19087929,19086821,19086270,19084698,19081573,19078066,19076902,19074896	Gene ID= ENSG00000127481.14 TPM= 48.33 Transcript Type= protein_coding
chr1	19074514	19104916	19074514	19104916	-	ENST00000375224.1@UBR4	ENST00000375224.1	protein_coding	19104585,19104084,19101520,19100376,19099597,19097193,19096523,19095545,19094906,19093949,19093313,19092819,19088759,19087816,19086679,19086145,19084504,19081349,19077976,19076740,19074514	19104916,19104257,19101641,19100573,19099677,19097280,19096650,19095652,19095025,19094139,19093486,19092918,19088977,19087929,19086821,19086270,19084698,19081573,19078066,19076902,19074896	Gene ID= ENSG00000127481.14 TPM= 27.09 Transcript Type= protein_coding
chr1	19210396	19213717	19210396	19213717	+	transcript1580.chr1.nnic@NA	transcript1580.chr1.nnic	NA	19210396	19213717	Gene ID= novel_gene_chr1_1581 TPM= 3.19 Transcript Type= NA
chr1	19215664	19251552	19215664	19251552	-	ENST00000477853.5@EMC1	ENST00000477853.5	protein_coding	19251415,19244906,19243950,19243614,19242345,19241016,19240297,19239818,19239231,19238795,19238017,19237142,19235130,19232936,19232624,19231261,19230844,19227313,19223396,19222624,19220764,19219569,19215664	19251552,19245030,19244015,19243707,19242473,19241142,19240446,19239985,19239302,19238857,19238139,19237238,19235252,19233135,19232773,19231422,19230963,19227450,19223569,19222834,19220848,19219698,19219482	Gene ID= ENSG00000127463.14 TPM= 8.5 Transcript Type= protein_coding
chr1	19251539	19260128	19251539	19260128	+	ENST00000330263.4@MRTO4	ENST00000330263.4	protein_coding	19251539,19254782,19255948,19257064,19257454,19257833,19258477,19258681	19251863,19254840,19256051,19257145,19257521,19257984,19258553,19260128	Gene ID= ENSG00000053372.4 TPM= 4.25 Transcript Type= protein_coding
chr1	19303965	19312146	19303965	19312146	-	ENST00000235835.7@AKR7A2	ENST00000235835.7	protein_coding	19311827,19308455,19308158,19307314,19307002,19306018,19303965	19312146,19308642,19308262,19307410,19307101,19306147,19304386	Gene ID= ENSG00000053371.12 TPM= 94.53 Transcript Type= protein_coding
chr1	19312326	19329300	19312326	19329300	+	ENST00000375155.7@PQLC2	ENST00000375155.7	protein_coding	19312326,19312729,19317600,19324633,19325495,19326245,19326531,19327227,19328572	19312358,19312889,19317841,19324762,19325582,19326387,19326623,19327412,19329300	Gene ID= ENSG00000040487.12 TPM= 12.75 Transcript Type= protein_coding
chr1	19338774	19340760	19338774	19340760	-	transcript1607.chr1.nnic@NA	transcript1607.chr1.nnic	NA	19338774	19340760	Gene ID= novel_gene_chr1_1608 TPM= 10.09 Transcript Type= NA
chr1	19338823	19485485	19338823	19485485	-	ENST00000375142.5@CAPZB	ENST00000375142.5	protein_coding	19485436,19419661,19385505,19378540,19357422,19356635,19345187,19344358,19342752,19338823	19485485,19419750,19385626,19378653,19357563,19356751,19345252,19344434,19342864,19339617	Gene ID= ENSG00000077549.17 TPM= 64.79 Transcript Type= protein_coding
chr1	19338779	19419751	19338779	19419751	-	ENST00000375144.5@CAPZB	ENST00000375144.5	protein_coding	19419661,19385505,19378540,19357422,19356635,19345187,19344358,19338779	19419751,19385626,19378653,19357563,19356751,19345252,19344434,19339617	Gene ID= ENSG00000077549.17 TPM= 11.15 Transcript Type= protein_coding
chr1	19343145	19346476	19343145	19346476	+	transcript1603.chr1.nnic@NA	transcript1603.chr1.nnic	NA	19343145	19346476	Gene ID= novel_gene_chr1_1604 TPM= 3.19 Transcript Type= NA
chr1	19351288	19353589	19351288	19353589	-	transcript1605.chr1.nnic@NA	transcript1605.chr1.nnic	NA	19351288	19353589	Gene ID= novel_gene_chr1_1606 TPM= 2.12 Transcript Type= NA
chr1	19596990	19629820	19596990	19629820	+	ENST00000322753.6@MINOS1	ENST00000322753.6	protein_coding	19596990,19622100,19623474,19626387	19597109,19622147,19623583,19629820	Gene ID= ENSG00000173436.13 TPM= 334.79 Transcript Type= protein_coding
chr1	19596977	19629821	19596977	19629821	+	ENST00000617872.4@MINOS1	ENST00000617872.4	protein_coding	19596977,19623474,19626387	19597109,19623583,19629821	Gene ID= ENSG00000173436.13 TPM= 3.19 Transcript Type= protein_coding
chr1	19597001	19626623	19597001	19626623	+	ENST00000467029.5@MINOS1	ENST00000467029.5	protein_coding	19597001,19617258,19622100,19623474,19626387	19597109,19617336,19622147,19623583,19626623	Gene ID= ENSG00000173436.13 TPM= 14.02 Transcript Type= processed_transcript
chr1	19597039	19626629	19597039	19626629	+	ENST00000481464.5@MINOS1	ENST00000481464.5	protein_coding	19597039,19600787,19622100,19623474,19626387	19597109,19600971,19622147,19623583,19626629	Gene ID= ENSG00000173436.13 TPM= 3.4 Transcript Type= processed_transcript
chr1	19597041	19626587	19597041	19626587	+	ENST00000498642.5@MINOS1	ENST00000498642.5	protein_coding	19597041,19622100,19623474,19625392,19626387	19597109,19622147,19623583,19625632,19626587	Gene ID= ENSG00000173436.13 TPM= 1.06 Transcript Type= processed_transcript
chr1	19597070	19626606	19597070	19626606	+	ENST00000485362.1@MINOS1	ENST00000485362.1	protein_coding	19597070,19597834,19622100,19623474,19626387	19597109,19597853,19622147,19623583,19626606	Gene ID= ENSG00000173436.13 TPM= 2.34 Transcript Type= processed_transcript
chr1	19644163	19658452	19644163	19658452	+	ENST00000375136.7@NBL1	ENST00000375136.7	protein_coding	19644163,19655012,19655324,19656866	19644446,19655200,19655435,19658452	Gene ID= ENSG00000158747.13 TPM= 96.66 Transcript Type= protein_coding
chr1	19682242	19799985	19682242	19799985	-	transcript1632.chr1.nic@TMCO4	transcript1632.chr1.nic	protein_coding	19799855,19787026,19780580,19771308,19770542,19755634,19747163,19746456,19745532,19740777,19739824,19737372,19700768,19694434,19682242	19799985,19787117,19780766,19771482,19770569,19755766,19747260,19746599,19745651,19740941,19739960,19737456,19700885,19694551,19683444	Gene ID= ENSG00000162542.13 TPM= 6.9 Transcript Type= NA
chr1	19682242	19799926	19682242	19799926	-	transcript1634.chr1.nic@TMCO4	transcript1634.chr1.nic	protein_coding	19799855,19787026,19780580,19771308,19770542,19755634,19747163,19746456,19740777,19739824,19737372,19700768,19694434,19682242	19799926,19787117,19780766,19771482,19770569,19755766,19747260,19746599,19740941,19739960,19737456,19700885,19694551,19683444	Gene ID= ENSG00000162542.13 TPM= 2.66 Transcript Type= NA
chr1	19975432	19979743	19975432	19979743	-	ENST00000400520.7@PLA2G2A	ENST00000400520.7	protein_coding	19979580,19978734,19978380,19978015,19975432	19979743,19978879,19978524,19978121,19975843	Gene ID= ENSG00000188257.10 TPM= 16.99 Transcript Type= protein_coding
chr1	19975438	19979614	19975438	19979614	-	ENST00000496748.1@PLA2G2A	ENST00000496748.1	protein_coding	19979580,19978015,19975438	19979614,19978879,19975843	Gene ID= ENSG00000188257.10 TPM= 2.12 Transcript Type= processed_transcript
chr1	20028517	20091168	20028517	20091168	+	transcript1647.chr1.nic@PLA2G5	transcript1647.chr1.nic	protein_coding	20028517,20059632,20068873,20084821,20086083,20089789,20090568	20028709,20059692,20069032,20084870,20086227,20089895,20091168	Gene ID= ENSG00000127472.10 TPM= 8.32 Transcript Type= NA
chr1	20028517	20091168	20028517	20091168	+	transcript1649.chr1.nnic@PLA2G5	transcript1649.chr1.nnic	protein_coding	20028517,20068873,20084821,20086083,20089789,20090568	20028709,20069032,20084870,20086227,20089895,20091168	Gene ID= ENSG00000127472.10 TPM= 8.32 Transcript Type= NA
chr1	20070162	20091168	20070162	20091168	+	transcript1650.chr1.nic@PLA2G5	transcript1650.chr1.nic	protein_coding	20070162,20084821,20086083,20088825,20089789,20090568	20070465,20084870,20086227,20088901,20089895,20091168	Gene ID= ENSG00000127472.10 TPM= 9.37 Transcript Type= NA
chr1	20070195	20091168	20070195	20091168	+	transcript1651.chr1.nnic@PLA2G5	transcript1651.chr1.nnic	protein_coding	20070195,20071489,20084821,20086083,20089789,20090568	20070465,20071635,20084870,20086227,20089895,20091168	Gene ID= ENSG00000127472.10 TPM= 9.37 Transcript Type= NA
chr1	20070195	20091168	20070195	20091168	+	transcript1656.chr1.nnic@PLA2G5	transcript1656.chr1.nnic	protein_coding	20070195,20071489,20084821,20086083,20090568	20070465,20071635,20084870,20086227,20091168	Gene ID= ENSG00000127472.10 TPM= 8.45 Transcript Type= NA
chr1	20070162	20091168	20070162	20091168	+	transcript1657.chr1.nnic@PLA2G5	transcript1657.chr1.nnic	protein_coding	20070162,20084821,20086083,20090568	20070465,20084870,20086227,20091168	Gene ID= ENSG00000127472.10 TPM= 44.57 Transcript Type= NA
chr1	20070194	20091168	20070194	20091168	+	transcript1660.chr1.nnic@PLA2G5	transcript1660.chr1.nnic	protein_coding	20070194,20086083,20090568	20070465,20086227,20091168	Gene ID= ENSG00000127472.10 TPM= 8.45 Transcript Type= NA
chr1	20070208	20091168	20070208	20091168	+	ENST00000375108.3@PLA2G5	ENST00000375108.3	protein_coding	20070208,20084821,20086083,20089789,20090568	20070465,20084870,20086227,20089895,20091168	Gene ID= ENSG00000127472.10 TPM= 28.49 Transcript Type= protein_coding
chr1	20482391	20486220	20482391	20486220	-	ENST00000375078.3@CAMK2N1	ENST00000375078.3	protein_coding	20485214,20482391	20486220,20483719	Gene ID= ENSG00000162545.5 TPM= 25.49 Transcript Type= protein_coding
chr1	20499448	20508161	20499448	20508161	-	ENST00000264198.4@MUL1	ENST00000264198.4	protein_coding	20507905,20503222,20502069,20499448	20508161,20503309,20502189,20501419	Gene ID= ENSG00000090432.6 TPM= 115.78 Transcript Type= protein_coding
chr1	20552439	20555010	20552439	20555010	+	ENST00000332947.5@FAM43B	ENST00000332947.5	protein_coding	20552439	20555010	Gene ID= ENSG00000183114.7 TPM= 23.37 Transcript Type= protein_coding
chr1	20588948	20618908	20588948	20618908	+	ENST00000375071.3@CDA	ENST00000375071.3	protein_coding	20588948,20604928,20613842,20618452	20589283,20605039,20613899,20618908	Gene ID= ENSG00000158825.5 TPM= 2.12 Transcript Type= protein_coding
chr1	20589086	20618903	20589086	20618903	+	ENST00000461985.1@CDA	ENST00000461985.1	protein_coding	20589086,20604928,20618452	20589283,20605039,20618903	Gene ID= ENSG00000158825.5 TPM= 1.06 Transcript Type= processed_transcript
chr1	20633455	20651511	20633455	20651511	+	ENST00000321556.4@PINK1	ENST00000321556.4	protein_coding	20633455,20637842,20639892,20644490,20645560,20648505,20648995,20650434	20633935,20638129,20639992,20644672,20645723,20648632,20649231,20651511	Gene ID= ENSG00000158828.7 TPM= 130.11 Transcript Type= protein_coding
chr1	20651767	20661544	20651767	20661544	-	ENST00000415136.6@DDOST	ENST00000415136.6	protein_coding	20661197,20660881,20656101,20655676,20655440,20654614,20654223,20653627,20652851,20652621,20651767	20661544,20660991,20656187,20655779,20655534,20654707,20654371,20653774,20652971,20652727,20652528	Gene ID= ENSG00000244038.9 TPM= 330.33 Transcript Type= protein_coding
chr1	20742679	20787296	20742679	20787296	-	transcript1704.chr1.nic@HP1BP3	transcript1704.chr1.nic	protein_coding	20787195,20779812,20776597,20773451,20770930,20767584,20765377,20757166,20749723,20747544,20745543,20744744,20742679	20787296,20779911,20776750,20773610,20771073,20767664,20765531,20757256,20749882,20747655,20745656,20745091,20743174	Gene ID= ENSG00000127483.17 TPM= 4.34 Transcript Type= NA
chr1	20742682	20787323	20742682	20787323	-	transcript1706.chr1.nic@HP1BP3	transcript1706.chr1.nic	protein_coding	20787195,20780345,20779812,20776597,20773451,20770930,20767584,20765377,20757166,20749723,20747544,20745543,20742682	20787323,20780540,20779911,20776750,20773610,20771073,20767664,20765531,20757256,20749882,20747655,20745656,20745091	Gene ID= ENSG00000127483.17 TPM= 18.11 Transcript Type= NA
chr1	20742661	20786688	20742661	20786688	-	ENST00000312239.9@HP1BP3	ENST00000312239.9	protein_coding	20786649,20780345,20779812,20776597,20773451,20770930,20767584,20765377,20757166,20749723,20747544,20745543,20742661	20786688,20780540,20779911,20776750,20773610,20771073,20767664,20765531,20757256,20749882,20747655,20745656,20745091	Gene ID= ENSG00000127483.17 TPM= 8.2 Transcript Type= protein_coding
chr1	20742682	20787347	20742682	20787347	-	transcript1715.chr1.nic@HP1BP3	transcript1715.chr1.nic	protein_coding	20787195,20779812,20776597,20773451,20770930,20767584,20765377,20757166,20749723,20747544,20745543,20742682	20787347,20779911,20776750,20773610,20771073,20767664,20765531,20757256,20749882,20747655,20745656,20745091	Gene ID= ENSG00000127483.17 TPM= 29.26 Transcript Type= NA
chr1	20754059	20787323	20754059	20787323	-	transcript1722.chr1.nnic@HP1BP3	transcript1722.chr1.nnic	protein_coding	20787195,20780345,20779812,20776597,20773451,20770930,20767584,20765377,20757166,20754059	20787323,20780540,20779911,20776750,20773610,20771073,20767664,20765531,20757256,20755404	Gene ID= ENSG00000127483.17 TPM= 6.47 Transcript Type= NA
chr1	20754059	20787347	20754059	20787347	-	transcript1724.chr1.nnic@HP1BP3	transcript1724.chr1.nnic	protein_coding	20787195,20779812,20776597,20773451,20770930,20767584,20765377,20757166,20754059	20787347,20779911,20776750,20773610,20771073,20767664,20765531,20757256,20755404	Gene ID= ENSG00000127483.17 TPM= 3.28 Transcript Type= NA
chr1	20742682	20775005	20742682	20775005	-	ENST00000375003.6@HP1BP3	ENST00000375003.6	protein_coding	20773451,20770930,20767584,20765377,20757166,20749723,20747544,20745543,20742682	20775005,20771073,20767664,20765531,20757256,20749882,20747655,20745656,20745091	Gene ID= ENSG00000127483.17 TPM= 7.92 Transcript Type= protein_coding
chr1	20806470	21050994	20806470	21050994	-	ENST00000264211.12@EIF4G3	ENST00000264211.12	protein_coding	21050866,21002713,20981048,20980334,20973002,20969474,20950003,20941491,20904883,20899697,20895368,20893517,20886201,20879323,20865116,20864476,20862228,20860385,20857403,20854978,20853560,20851258,20849415,20840856,20829147,20827617,20825100,20817392,20813158,20810738,20806470	21050994,21002808,20981227,20980448,20973099,20969596,20950111,20942330,20904971,20899943,20895501,20893636,20886371,20879520,20865262,20864712,20862332,20860517,20857497,20855071,20853677,20851478,20849530,20841028,20829272,20827698,20825198,20817538,20813239,20810884,20807500	Gene ID= ENSG00000075151.20 TPM= 11.68 Transcript Type= protein_coding
chr1	21217247	21345504	21217247	21345504	-	ENST00000415912.6@ECE1	ENST00000415912.6	protein_coding	21345376,21290070,21279191,21272699,21260271,21258693,21257525,21255947,21247221,21244989,21238134,21236746,21235850,21233558,21227931,21227159,21225250,21221747,21217247	21345504,21290156,21279332,21272911,21260392,21258839,21257590,21256138,21247363,21245103,21238244,21236844,21235927,21233661,21228041,21227226,21225440,21221842,21220131	Gene ID= ENSG00000117298.14 TPM= 62.67 Transcript Type= protein_coding
chr1	21233792	21235149	21233792	21235149	+	transcript1745.chr1.nnic@NA	transcript1745.chr1.nnic	NA	21233792	21235149	Gene ID= novel_gene_chr1_1746 TPM= 2.12 Transcript Type= NA
chr1	21509372	21578412	21509372	21578412	+	ENST00000374840.7@ALPL	ENST00000374840.7	protein_coding	21509372,21553978,21560626,21561097,21563110,21564041,21568104,21570305,21573665,21575733,21576522,21577383	21509517,21554142,21560745,21561212,21563284,21564216,21568247,21570374,21573799,21575924,21576641,21578412	Gene ID= ENSG00000162551.13 TPM= 32.93 Transcript Type= protein_coding
chr1	21561667	21564502	21561667	21564502	-	transcript1756.chr1.nnic@NA	transcript1756.chr1.nnic	NA	21564036,21561667	21564502,21563281	Gene ID= novel_gene_chr1_1757 TPM= 2.12 Transcript Type= NA
chr1	21596221	21620041	21596221	21620041	-	ENST00000374763.6@RAP1GAP	ENST00000374763.6	protein_coding	21620015,21619025,21617934,21617306,21613986,21613628,21613176,21612026,21611716,21611452,21610120,21609575,21608850,21608213,21606066,21603658,21602804,21601684,21599494,21598400,21597961,21597686,21596221	21620041,21619072,21617972,21617491,21614089,21613706,21613229,21612109,21611816,21611581,21610275,21609646,21608936,21608350,21606197,21603912,21602913,21601797,21599617,21598502,21598064,21597728,21597264	Gene ID= ENSG00000076864.19 TPM= 1.06 Transcript Type= protein_coding
chr1	21596221	21622568	21596221	21622568	-	ENST00000374761.6@RAP1GAP	ENST00000374761.6	protein_coding	21622339,21620015,21619025,21617934,21617306,21613986,21613628,21613176,21612026,21611716,21611452,21610120,21609575,21608850,21608213,21606066,21602804,21601684,21599494,21598400,21597961,21597686,21596221	21622568,21620050,21619072,21617972,21617491,21614089,21613706,21613229,21612109,21611816,21611581,21610275,21609646,21608936,21608350,21606197,21602913,21601797,21599617,21598502,21598064,21597728,21597264	Gene ID= ENSG00000076864.19 TPM= 6.37 Transcript Type= protein_coding
chr1	21678579	21783606	21678579	21783606	-	ENST00000308271.13@USP48	ENST00000308271.13	protein_coding	21782824,21757663,21756546,21752992,21752527,21751507,21748138,21747067,21736446,21729704,21728570,21723898,21721650,21721036,21715389,21706744,21706467,21706126,21705727,21704262,21703512,21701498,21695066,21689974,21687191,21680808,21678579	21783606,21757783,21756702,21753119,21752651,21751615,21748271,21747149,21736625,21729832,21728719,21724095,21721764,21721166,21715457,21706868,21706589,21706187,21705837,21704392,21703618,21701602,21695221,21690099,21687239,21680834,21679439	Gene ID= ENSG00000090686.15 TPM= 3.19 Transcript Type= protein_coding
chr1	21721036	21783146	21721036	21783146	-	transcript1783.chr1.nnic@USP48	transcript1783.chr1.nnic	protein_coding	21782824,21757663,21756546,21752992,21752527,21751507,21748138,21747067,21736446,21729704,21728570,21721650,21721036	21783146,21757783,21756702,21753119,21752651,21751615,21748271,21747149,21736625,21729832,21728719,21721764,21721166	Gene ID= ENSG00000090686.15 TPM= 4.25 Transcript Type= NA
chr1	21727851	21783606	21727851	21783606	-	ENST00000421625.6@USP48	ENST00000421625.6	protein_coding	21782824,21757663,21756546,21752992,21752527,21751507,21748138,21747067,21736446,21729704,21727851	21783606,21757783,21756702,21753119,21752651,21751615,21748271,21747149,21736625,21729832,21728719	Gene ID= ENSG00000090686.15 TPM= 14.87 Transcript Type= protein_coding
chr1	21686321	21688273	21686321	21688273	+	transcript1800.chr1.nnic@NA	transcript1800.chr1.nnic	NA	21686321	21688273	Gene ID= novel_gene_chr1_1801 TPM= 2.12 Transcript Type= NA
chr1	21753485	21753846	21753485	21753846	+	transcript1802.chr1.nnic@NA	transcript1802.chr1.nnic	NA	21753485	21753846	Gene ID= novel_gene_chr1_1803 TPM= 4.25 Transcript Type= NA
chr1	21819797	21823456	21819797	21823456	-	transcript1810.chr1.nnic@NA	transcript1810.chr1.nnic	NA	21819797	21823456	Gene ID= novel_gene_chr1_1811 TPM= 5.84 Transcript Type= NA
chr1	21871259	21937324	21871259	21937324	-	transcript1766.chr1.nnic@HSPG2	transcript1766.chr1.nnic	protein_coding	21937155,21896175,21895922,21893589,21890585,21890427,21889981,21888668,21887938,21887420,21887215,21885320,21885013,21884767,21884528,21881339,21880656,21880363,21880107,21878994,21878577,21878433,21878186,21876512,21876229,21875863,21875629,21874891,21874616,21874406,21873925,21873375,21872997,21872620,21871259	21937324,21896310,21895966,21893663,21890694,21890485,21890141,21888718,21888066,21887674,21887334,21885451,21885157,21884918,21884674,21881502,21880835,21880559,21880254,21879121,21878663,21878491,21878253,21876652,21876405,21876042,21875747,21875002,21874729,21874533,21874011,21873424,21873091,21872760,21872377	Gene ID= ENSG00000142798.17 TPM= 36.11 Transcript Type= NA
chr1	21860416	21863088	21860416	21863088	-	transcript1796.chr1.nic@HSPG2	transcript1796.chr1.nic	protein_coding	21861988,21860416	21863088,21861843	Gene ID= ENSG00000142798.17 TPM= 14.87 Transcript Type= NA
chr1	21822245	21830713	21822245	21830713	-	ENST00000486901.1@HSPG2	ENST00000486901.1	protein_coding	21829383,21828835,21828255,21828030,21827863,21824704,21824537,21824306,21824121,21823616,21822245	21830713,21829079,21828426,21828152,21827919,21824779,21824615,21824376,21824204,21823719,21823488	Gene ID= ENSG00000142798.17 TPM= 271.91 Transcript Type= retained_intron
chr1	21822245	21937297	21822245	21937297	-	ENST00000374695.7@HSPG2	ENST00000374695.7	protein_coding	21937155,21896175,21895922,21890585,21890427,21889981,21887938,21887420,21887215,21885320,21885013,21884767,21884528,21881339,21880656,21880363,21880107,21878994,21878577,21878433,21878186,21876512,21876229,21875863,21875629,21874891,21874616,21874406,21873925,21873375,21872997,21872620,21872186,21865717,21865285,21864843,21864100,21861988,21861757,21860177,21859835,21859566,21857285,21857015,21855787,21855523,21855304,21854848,21854611,21854193,21852919,21852700,21852088,21851791,21851546,21850363,21850041,21848893,21848643,21847958,21847689,21847354,21846448,21846108,21844148,21843297,21842770,21842239,21842002,21841539,21841101,21839822,21839371,21838825,21836802,21835540,21834679,21833816,21833467,21833268,21832495,21831652,21831463,21831215,21830982,21829993,21829383,21828835,21828255,21828030,21827863,21824704,21824537,21824306,21824121,21823616,21822245	21937297,21896310,21895966,21890694,21890485,21890141,21888066,21887674,21887334,21885451,21885157,21884918,21884674,21881502,21880835,21880559,21880254,21879121,21878663,21878491,21878253,21876652,21876405,21876042,21875747,21875002,21874729,21874533,21874011,21873424,21873091,21872760,21872377,21865809,21865365,21865073,21864213,21862115,21861843,21860235,21860002,21859676,21857385,21857195,21855912,21855675,21855446,21854983,21854765,21854343,21853070,21852832,21852233,21851926,21851697,21850498,21850192,21849031,21848794,21848093,21847840,21847492,21846599,21846255,21844299,21843438,21842921,21842380,21842142,21841673,21841285,21840017,21839550,21839085,21837006,21835637,21834945,21833925,21833614,21833384,21832606,21831796,21831562,21831324,21831090,21830091,21829604,21829079,21828426,21828152,21827919,21824779,21824615,21824376,21824204,21823719,21823488	Gene ID= ENSG00000142798.17 TPM= 408.4 Transcript Type= protein_coding
chr1	21856829	21861497	21856829	21861497	+	transcript1798.chr1.nnic@NA	transcript1798.chr1.nnic	NA	21856829	21861497	Gene ID= novel_gene_chr1_1799 TPM= 5.31 Transcript Type= NA
chr1	21914265	21916082	21914265	21916082	+	transcript1806.chr1.nnic@NA	transcript1806.chr1.nnic	NA	21914265	21916082	Gene ID= novel_gene_chr1_1807 TPM= 6.37 Transcript Type= NA
chr1	21925180	21926786	21925180	21926786	+	transcript1808.chr1.nnic@NA	transcript1808.chr1.nnic	NA	21925180	21926786	Gene ID= novel_gene_chr1_1809 TPM= 6.37 Transcript Type= NA
chr1	22025511	22031223	22025511	22031223	+	ENST00000416769.2@LINC00339	ENST00000416769.2	transcribed_processed_pseudogene	22025511,22030280	22025643,22031223	Gene ID= ENSG00000218510.7 TPM= 12.75 Transcript Type= processed_transcript
chr1	22052668	22092946	22052668	22092946	+	ENST00000344548.7@CDC42	ENST00000344548.7	protein_coding	22052668,22074094,22078429,22081722,22086439,22086669,22091428	22052742,22074219,22078583,22081794,22086548,22086866,22092946	Gene ID= ENSG00000070831.15 TPM= 41.69 Transcript Type= protein_coding
chr1	22052662	22092414	22052662	22092414	+	transcript1818.chr1.nic@CDC42	transcript1818.chr1.nic	protein_coding	22052662,22078429,22081722,22086439,22086669,22091428	22052742,22078583,22081794,22086548,22086866,22092414	Gene ID= ENSG00000070831.15 TPM= 47 Transcript Type= NA
chr1	22052689	22090804	22052689	22090804	+	ENST00000315554.12@CDC42	ENST00000315554.12	protein_coding	22052689,22078429,22081722,22086439,22086669,22089943	22052742,22078583,22081794,22086548,22086866,22090804	Gene ID= ENSG00000070831.15 TPM= 3.45 Transcript Type= protein_coding
chr1	22410934	22413363	22410934	22413363	-	transcript1820.chr1.nnic@NA	transcript1820.chr1.nnic	NA	22410934	22413363	Gene ID= novel_gene_chr1_1821 TPM= 2.12 Transcript Type= NA
chr1	22636506	22639608	22636506	22639608	+	ENST00000374642.7@C1QA	ENST00000374642.7	protein_coding	22636506,22637610,22638833	22636702,22637779,22639608	Gene ID= ENSG00000173372.16 TPM= 26.55 Transcript Type= protein_coding
chr1	22643630	22648110	22643630	22648110	+	ENST00000374640.8@C1QC	ENST00000374640.8	protein_coding	22643630,22644011,22647227	22643714,22644204,22648110	Gene ID= ENSG00000159189.11 TPM= 20.18 Transcript Type= protein_coding
chr1	23019448	23083689	23019448	23083689	+	ENST00000356634.7@KDM1A	ENST00000356634.7	protein_coding	23019448,23030469,23050387,23053761,23055069,23055932,23057484,23059073,23068539,23069061,23071225,23072124,23073292,23077228,23078990,23079553,23081446,23082220,23083179	23019947,23030634,23050520,23053839,23055161,23056038,23057565,23059167,23068681,23069151,23071359,23072197,23073403,23077360,23079177,23079667,23081573,23082366,23083689	Gene ID= ENSG00000004487.15 TPM= 38.95 Transcript Type= protein_coding
chr1	23019493	23083688	23019493	23083688	+	ENST00000400181.8@KDM1A	ENST00000400181.8	protein_coding	23019493,23030469,23044427,23050387,23053761,23055069,23055932,23057484,23059073,23066060,23068539,23069061,23071225,23072124,23073292,23077228,23078990,23079553,23081446,23082220,23083179	23019947,23030634,23044486,23050520,23053839,23055161,23056038,23057565,23059167,23066071,23068681,23069151,23071359,23072197,23073403,23077360,23079177,23079667,23081573,23082366,23083688	Gene ID= ENSG00000004487.15 TPM= 58.07 Transcript Type= protein_coding
chr1	23078340	23080440	23078340	23080440	-	transcript1857.chr1.nnic@NA	transcript1857.chr1.nnic	NA	23078340	23080440	Gene ID= novel_gene_chr1_1858 TPM= 4.25 Transcript Type= NA
chr1	23084030	23177808	23084030	23177808	-	ENST00000302291.8@LUZP1	ENST00000302291.8	protein_coding	23177491,23168766,23109022,23091190,23084030	23177808,23169024,23109127,23094380,23089053	Gene ID= ENSG00000169641.13 TPM= 21.24 Transcript Type= protein_coding
chr1	23284196	23287462	23284196	23287462	+	transcript1861.chr1.nnic@NA	transcript1861.chr1.nnic	NA	23284196	23287462	Gene ID= novel_gene_chr1_1862 TPM= 9.56 Transcript Type= NA
chr1	23311295	23344349	23311295	23344349	-	transcript1871.chr1.nic@HNRNPR	transcript1871.chr1.nic	protein_coding	23344211,23338490,23337754,23333518,23323556,23321528,23318483,23313553,23311295	23344349,23338608,23337861,23333631,23323732,23321663,23318688,23313702,23311322	Gene ID= ENSG00000125944.19 TPM= 3.72 Transcript Type= NA
chr1	23309786	23344322	23309786	23344322	-	ENST00000374612.5@HNRNPR	ENST00000374612.5	protein_coding	23344211,23340852,23338490,23337754,23333518,23323556,23321528,23318483,23313553,23311201,23309786	23344322,23341020,23338608,23337861,23333631,23323732,23321663,23318688,23313702,23311322,23311066	Gene ID= ENSG00000125944.19 TPM= 56.29 Transcript Type= protein_coding
chr1	23309788	23344262	23309788	23344262	-	ENST00000302271.10@HNRNPR	ENST00000302271.10	protein_coding	23344211,23340852,23338490,23337754,23333518,23323556,23321528,23318483,23313553,23311201,23309788	23344262,23341017,23338608,23337861,23333631,23323732,23321663,23318688,23313702,23311322,23311066	Gene ID= ENSG00000125944.19 TPM= 8.5 Transcript Type= protein_coding
chr1	23317710	23321175	23317710	23321175	+	transcript1876.chr1.nnic@NA	transcript1876.chr1.nnic	NA	23317710	23321175	Gene ID= novel_gene_chr1_1877 TPM= 2.12 Transcript Type= NA
chr1	23328176	23331420	23328176	23331420	+	transcript1878.chr1.nnic@NA	transcript1878.chr1.nnic	NA	23328176	23331420	Gene ID= novel_gene_chr1_1879 TPM= 5.31 Transcript Type= NA
chr1	23359975	23368386	23359975	23368386	-	ENST00000374608.3@ZNF436	ENST00000374608.3	protein_coding	23367973,23367042,23359975	23368386,23367168,23363221	Gene ID= ENSG00000125945.14 TPM= 4.25 Transcript Type= protein_coding
chr1	23368954	23371783	23368954	23371783	+	transcript1884.chr1.nic@ZNF436-AS1	transcript1884.chr1.nic	antisense_RNA	23368954,23371139,23371513	23369324,23371209,23371783	Gene ID= ENSG00000249087.6 TPM= 4.25 Transcript Type= NA
chr1	23369236	23371782	23369236	23371782	+	ENST00000335648.3@ZNF436-AS1	ENST00000335648.3	antisense_RNA	23369236	23371782	Gene ID= ENSG00000249087.6 TPM= 1.06 Transcript Type= antisense_RNA
chr1	23381371	23424806	23381371	23424806	-	transcript1904.chr1.nnic@TCEA3	transcript1904.chr1.nnic	protein_coding	23424565,23419077,23417904,23417249,23397792,23397545,23393879,23387273,23384346,23381371	23424806,23419139,23418009,23417390,23397955,23397601,23394033,23387419,23384417,23381474	Gene ID= ENSG00000204219.9 TPM= 12.75 Transcript Type= NA
chr1	23381061	23424740	23381061	23424740	-	ENST00000450454.6@TCEA3	ENST00000450454.6	protein_coding	23424565,23419077,23417904,23417249,23408664,23397792,23397545,23393879,23387273,23384346,23381061	23424740,23419139,23418009,23417390,23408726,23397955,23397601,23394033,23387419,23384417,23381474	Gene ID= ENSG00000204219.9 TPM= 15.93 Transcript Type= protein_coding
chr1	23428563	23484211	23428563	23484211	-	transcript1910.chr1.nic@ASAP3	transcript1910.chr1.nic	protein_coding	23484036,23456122,23455881,23452697,23451479,23442501,23442186,23441655,23441387,23441102,23439161,23438747,23437424,23437130,23436911,23436560,23435851,23434533,23434254,23433626,23433425,23433077,23431696,23431035,23428563	23484211,23456194,23456026,23452771,23451528,23442612,23442271,23441730,23441473,23441211,23439230,23438834,23437472,23437320,23437044,23436654,23436028,23434618,23434369,23433693,23433532,23433272,23431918,23431125,23429930	Gene ID= ENSG00000088280.18 TPM= 6.37 Transcript Type= NA
chr1	23428563	23484178	23428563	23484178	-	ENST00000336689.7@ASAP3	ENST00000336689.7	protein_coding	23484005,23456122,23455881,23452697,23451479,23442501,23442186,23441655,23441387,23441102,23439161,23438747,23437424,23437130,23436911,23436560,23435851,23434533,23434254,23433626,23433425,23433077,23431696,23431035,23428563	23484178,23456194,23456026,23452771,23451528,23442612,23442271,23441730,23441473,23441211,23439230,23438834,23437472,23437320,23437044,23436654,23436028,23434618,23434369,23433693,23433532,23433272,23431918,23431125,23429930	Gene ID= ENSG00000088280.18 TPM= 26.55 Transcript Type= protein_coding
chr1	23557918	23559794	23557918	23559794	-	ENST00000374561.5@ID3	ENST00000374561.5	protein_coding	23559127,23558935,23557918	23559794,23559019,23558415	Gene ID= ENSG00000117318.8 TPM= 232.61 Transcript Type= protein_coding
chr1	23557933	23559883	23557933	23559883	-	transcript1920.chr1.nnic@NA	transcript1920.chr1.nnic	NA	23557933	23559883	Gene ID= novel_gene_chr1_1921 TPM= 54.17 Transcript Type= NA
chr1	23691779	23696425	23691779	23696425	+	ENST00000374550.7@RPL11	ENST00000374550.7	protein_coding	23691779,23692609,23693807,23694660,23695798,23696344	23691829,23692759,23693913,23694791,23695908,23696425	Gene ID= ENSG00000142676.12 TPM= 357.95 Transcript Type= protein_coding
chr1	23743155	23762059	23743155	23762059	+	ENST00000418390.6@ELOA	ENST00000418390.6	protein_coding	23743155,23749021,23749842,23750845,23752407,23754100,23754363,23755843,23756274,23756953,23759512	23743578,23749077,23749948,23752030,23752518,23754255,23754460,23756023,23756385,23757125,23762059	Gene ID= ENSG00000011007.12 TPM= 13.28 Transcript Type= protein_coding
chr1	23743472	23759893	23743472	23759893	+	ENST00000609199.1@ELOA	ENST00000609199.1	protein_coding	23743472,23749021,23749842,23750845,23752407,23754100,23754363,23755843,23756274,23756953,23759512	23743578,23749077,23749948,23752030,23752518,23754255,23754460,23756023,23756385,23757125,23759893	Gene ID= ENSG00000011007.12 TPM= 13.28 Transcript Type= protein_coding
chr1	23778386	23788232	23778386	23788232	+	transcript1931.chr1.nnic@PITHD1	transcript1931.chr1.nnic	protein_coding	23778386,23779864,23785675,23786315,23787275	23778713,23779941,23785779,23786423,23788232	Gene ID= ENSG00000057757.9 TPM= 7.44 Transcript Type= NA
chr1	23778405	23788232	23778405	23788232	+	ENST00000246151.8@PITHD1	ENST00000246151.8	protein_coding	23778405,23779438,23779864,23785675,23786315,23787275	23778713,23779481,23779941,23785779,23786423,23788232	Gene ID= ENSG00000057757.9 TPM= 43.55 Transcript Type= protein_coding
chr1	23790970	23795539	23790970	23795539	+	ENST00000374514.7@LYPLA2	ENST00000374514.7	protein_coding	23790970,23792657,23793008,23793151,23793705,23793860,23794063,23794224,23794427,23794682	23791250,23792760,23793039,23793216,23793752,23793930,23794136,23794325,23794600,23795539	Gene ID= ENSG00000011009.10 TPM= 72.23 Transcript Type= protein_coding
chr1	23791128	23795539	23791128	23795539	+	transcript1948.chr1.nic@LYPLA2	transcript1948.chr1.nic	protein_coding	23791128,23792657,23793151,23793705,23793860,23794063,23794224,23794427,23794682	23791250,23792760,23793216,23793752,23793930,23794136,23794325,23794600,23795539	Gene ID= ENSG00000011009.10 TPM= 10.62 Transcript Type= NA
chr1	23795599	23800804	23795599	23800804	-	ENST00000617979.4@GALE	ENST00000617979.4	protein_coding	23800712,23799366,23798887,23798615,23798117,23797695,23797034,23796876,23796697,23796509,23796151,23795599	23800804,23799436,23799012,23798730,23798230,23797871,23797147,23796942,23796782,23796586,23796265,23796007	Gene ID= ENSG00000117308.14 TPM= 19.65 Transcript Type= protein_coding
chr1	23795599	23800812	23795599	23800812	-	transcript1938.chr1.nic@GALE	transcript1938.chr1.nic	protein_coding	23800712,23799366,23798615,23798117,23797695,23797034,23796876,23796697,23796509,23796151,23795599	23800812,23799436,23798730,23798230,23797871,23797147,23796942,23796782,23796586,23796265,23796007	Gene ID= ENSG00000117308.14 TPM= 10.09 Transcript Type= NA
chr1	23801885	23825459	23801885	23825459	-	ENST00000374490.7@HMGCL	ENST00000374490.7	protein_coding	23825356,23820510,23817476,23816675,23814190,23810736,23808135,23804400,23801885	23825459,23820593,23817583,23816770,23814338,23810799,23808323,23804525,23802564	Gene ID= ENSG00000117305.14 TPM= 66.92 Transcript Type= protein_coding
chr1	23801887	23825428	23801887	23825428	-	ENST00000436439.6@HMGCL	ENST00000436439.6	protein_coding	23825356,23820510,23817476,23816675,23808135,23804400,23801887	23825428,23820593,23817583,23816770,23808323,23804525,23802564	Gene ID= ENSG00000117305.14 TPM= 22.31 Transcript Type= protein_coding
chr1	23845077	23868294	23845077	23868294	-	ENST00000374479.3@FUCA1	ENST00000374479.3	protein_coding	23867898,23865491,23863134,23859798,23854360,23848649,23846074,23845077	23868294,23865625,23863271,23859903,23854560,23848839,23846173,23845855	Gene ID= ENSG00000179163.11 TPM= 44.61 Transcript Type= protein_coding
chr1	23960079	23963462	23960079	23963462	+	transcript1967.chr1.nnic@PNRC2	transcript1967.chr1.nnic	protein_coding	23960079,23960929,23961440	23960206,23961134,23963462	Gene ID= ENSG00000189266.11 TPM= 13.81 Transcript Type= NA
chr1	23964802	23980319	23964802	23980319	-	transcript1970.chr1.nnic@SRSF10	transcript1970.chr1.nnic	protein_coding	23980191,23978713,23974974,23971850,23971573,23971338,23964802	23980319,23978817,23975077,23972012,23971626,23971439,23967723	Gene ID= ENSG00000188529.14 TPM= 2.12 Transcript Type= NA
chr1	23966445	23980927	23966445	23980927	-	ENST00000341154.10@SRSF10	ENST00000341154.10	protein_coding	23980191,23978653,23977911,23974974,23971850,23971573,23966445	23980927,23978817,23978273,23975051,23972012,23971626,23967723	Gene ID= ENSG00000188529.14 TPM= 2.12 Transcript Type= processed_transcript
chr1	23964804	23980331	23964804	23980331	-	ENST00000344989.10@SRSF10	ENST00000344989.10	protein_coding	23980191,23978713,23974974,23971850,23971573,23964804	23980331,23978817,23975077,23972012,23971626,23967723	Gene ID= ENSG00000188529.14 TPM= 6.37 Transcript Type= protein_coding
chr1	23966445	23980296	23966445	23980296	-	ENST00000453840.7@SRSF10	ENST00000453840.7	protein_coding	23980191,23978713,23974974,23971850,23971573,23966445	23980296,23978817,23975077,23972012,23971623,23967723	Gene ID= ENSG00000188529.14 TPM= 27.62 Transcript Type= protein_coding
chr1	23969083	23980327	23969083	23980327	-	ENST00000343255.9@SRSF10	ENST00000343255.9	protein_coding	23980191,23978713,23974974,23971850,23971573,23969083	23980327,23978817,23975077,23972012,23971623,23971439	Gene ID= ENSG00000188529.14 TPM= 9.56 Transcript Type= protein_coding
chr1	23970364	23980319	23970364	23980319	-	ENST00000492112.2@SRSF10	ENST00000492112.2	protein_coding	23980191,23978713,23974974,23971850,23971573,23970364	23980319,23978817,23975077,23972012,23971626,23971439	Gene ID= ENSG00000188529.14 TPM= 21.24 Transcript Type= protein_coding
chr1	24051894	24052994	24051894	24052994	-	transcript2013.chr1.nnic@NA	transcript2013.chr1.nnic	NA	24051894	24052994	Gene ID= novel_gene_chr1_2014 TPM= 4.25 Transcript Type= NA
chr1	24056037	24112175	24056037	24112175	-	ENST00000374434.3@MYOM3	ENST00000374434.3	protein_coding	24112031,24108476,24107993,24107073,24105920,24099680,24097923,24095442,24094853,24092947,24092174,24090797,24090065,24089538,24086644,24084468,24082593,24082001,24081330,24080016,24076159,24075319,24074160,24071969,24071117,24068223,24067970,24067021,24065891,24064072,24063492,24063126,24061946,24061273,24061060,24058924,24056037	24112175,24108654,24108073,24107232,24106077,24099775,24098011,24095486,24094990,24093108,24092315,24090996,24090118,24089665,24086827,24084639,24082714,24082188,24081456,24080194,24076273,24075475,24074269,24072013,24071253,24068367,24068029,24067088,24066001,24064159,24063530,24063234,24062109,24061309,24061082,24058979,24057627	Gene ID= ENSG00000142661.18 TPM= 265.54 Transcript Type= protein_coding
chr1	24068700	24071541	24068700	24071541	-	transcript2011.chr1.nnic@NA	transcript2011.chr1.nnic	NA	24068700	24071541	Gene ID= novel_gene_chr1_2012 TPM= 7.44 Transcript Type= NA
chr1	24071974	24073882	24071974	24073882	+	transcript2009.chr1.nnic@NA	transcript2009.chr1.nnic	NA	24071974	24073882	Gene ID= novel_gene_chr1_2010 TPM= 3.19 Transcript Type= NA
chr1	24099751	24100899	24099751	24100899	+	transcript2007.chr1.nnic@NA	transcript2007.chr1.nnic	NA	24099751	24100899	Gene ID= novel_gene_chr1_2008 TPM= 2.12 Transcript Type= NA
chr1	24154157	24187261	24154157	24187261	-	ENST00000327535.5@IFNLR1	ENST00000327535.5	protein_coding	24187191,24180731,24169417,24161542,24159474,24159052,24154157	24187261,24180854,24169601,24161684,24159633,24159182,24157891	Gene ID= ENSG00000185436.11 TPM= 1.06 Transcript Type= protein_coding
chr1	24321953	24323678	24321953	24323678	+	transcript2016.chr1.nnic@NA	transcript2016.chr1.nnic	NA	24321953	24323678	Gene ID= novel_gene_chr1_2017 TPM= 2.12 Transcript Type= NA
chr1	24357005	24416934	24357005	24416934	-	ENST00000468303.5@STPG1	ENST00000468303.5	protein_coding	24413674,24401319,24391924,24391561,24383902,24379653,24373702,24369674,24360851,24357005	24416934,24401456,24392067,24391679,24384003,24379823,24373810,24369839,24361041,24358619	Gene ID= ENSG00000001460.17 TPM= 1.06 Transcript Type= processed_transcript
chr1	24357000	24413772	24357000	24413772	-	ENST00000337248.8@STPG1	ENST00000337248.8	protein_coding	24413674,24401319,24391561,24383902,24379653,24373702,24369674,24360851,24357000	24413772,24401456,24391679,24384003,24379823,24373810,24369839,24361041,24358619	Gene ID= ENSG00000001460.17 TPM= 2.12 Transcript Type= protein_coding
chr1	24415813	24454824	24415813	24454824	+	ENST00000358028.8@NIPAL3	ENST00000358028.8	protein_coding	24415813,24419291,24440172,24442055,24445185,24449481,24453408,24454054	24415904,24419640,24440240,24442226,24445244,24449626,24453504,24454824	Gene ID= ENSG00000001461.16 TPM= 1.06 Transcript Type= protein_coding
chr1	24415794	24469307	24415794	24469307	+	ENST00000374399.8@NIPAL3	ENST00000374399.8	protein_coding	24415794,24419291,24440172,24442055,24445185,24449481,24453408,24456138,24458888,24460481,24464026,24468986	24415904,24419640,24440240,24442226,24445244,24449626,24453504,24456273,24458976,24460544,24464120,24469307	Gene ID= ENSG00000001461.16 TPM= 1.06 Transcript Type= protein_coding
chr1	24502836	24537019	24502836	24537019	+	transcript2036.chr1.nic@RCAN3	transcript2036.chr1.nic	protein_coding	24502836,24514314,24531218,24533083,24535093	24503117,24514567,24531391,24533254,24537019	Gene ID= ENSG00000117602.11 TPM= 3.19 Transcript Type= NA
chr1	24643012	24673267	24643012	24673267	+	ENST00000323848.13@SRRM1	ENST00000323848.13	protein_coding	24643012,24645984,24646667,24648859,24649971,24651409,24652434,24652913,24654855,24660719,24661310,24662660,24666815,24669123,24670120,24671386,24672182	24643347,24646073,24646789,24649029,24650086,24651612,24652628,24653032,24655129,24660799,24661396,24662804,24666925,24669587,24670315,24671595,24673267	Gene ID= ENSG00000133226.16 TPM= 16.73 Transcript Type= protein_coding
chr1	24643275	24670203	24643275	24670203	+	transcript2046.chr1.nic@SRRM1	transcript2046.chr1.nic	protein_coding	24643275,24645984,24646667,24648859,24649971,24651409,24652434,24652913,24654855,24660719,24661310,24662660,24663183,24666815,24669123,24670120	24643347,24646073,24646789,24649029,24650086,24651612,24652628,24653032,24655129,24660799,24661396,24662804,24663224,24666925,24669587,24670203	Gene ID= ENSG00000133226.16 TPM= 2.92 Transcript Type= NA
chr1	24643273	24650032	24643273	24650032	+	transcript2057.chr1.nic@SRRM1	transcript2057.chr1.nic	protein_coding	24643273,24645984,24646667,24647079,24649971	24643347,24646073,24646789,24649029,24650032	Gene ID= ENSG00000133226.16 TPM= 12.75 Transcript Type= NA
chr1	24643559	24669508	24643559	24669508	+	ENST00000596378.1@SRRM1	ENST00000596378.1	protein_coding	24643559,24645984,24646667,24648859,24649971,24651409,24652434,24652913,24654855,24660719,24661310,24662660,24663183,24666815,24669123	24643732,24646073,24646789,24649029,24650086,24651612,24652628,24653032,24655123,24660799,24661396,24662804,24663224,24666925,24669508	Gene ID= ENSG00000133226.16 TPM= 1.33 Transcript Type= protein_coding
chr1	24643275	24652514	24643275	24652514	+	ENST00000468822.5@SRRM1	ENST00000468822.5	protein_coding	24643275,24645984,24646667,24648859,24649971,24651499,24652434	24643347,24646073,24646789,24649029,24650086,24651612,24652514	Gene ID= ENSG00000133226.16 TPM= 1.06 Transcript Type= processed_transcript
chr1	24745357	24844324	24745357	24844324	+	ENST00000374379.8@CLIC4	ENST00000374379.8	protein_coding	24745357,24797742,24814094,24827010,24839860,24840773	24745625,24797851,24814219,24827116,24840041,24844324	Gene ID= ENSG00000169504.14 TPM= 186.94 Transcript Type= protein_coding
chr1	24745382	24844267	24745382	24844267	+	ENST00000488683.1@CLIC4	ENST00000488683.1	protein_coding	24745382,24797742,24814094,24827010,24839860,24840773,24844129	24745625,24797851,24814219,24827116,24840041,24842587,24844267	Gene ID= ENSG00000169504.14 TPM= 5.31 Transcript Type= nonsense_mediated_decay
chr1	24813048	24813711	24813048	24813711	-	transcript2073.chr1.nnic@NA	transcript2073.chr1.nnic	NA	24813048	24813711	Gene ID= novel_gene_chr1_2074 TPM= 2.12 Transcript Type= NA
chr1	25229015	25232547	25229015	25232547	-	transcript2080.chr1.nic@SYF2	transcript2080.chr1.nic	protein_coding	25232444,25232104,25229015	25232547,25232211,25229123	Gene ID= ENSG00000117614.9 TPM= 12.75 Transcript Type= NA
chr1	25222679	25232493	25222679	25232493	-	ENST00000236273.8@SYF2	ENST00000236273.8	protein_coding	25232444,25232104,25228998,25228118,25227442,25225002,25222679	25232493,25232211,25229123,25228235,25227532,25225100,25223431	Gene ID= ENSG00000117614.9 TPM= 30.8 Transcript Type= protein_coding
chr1	25242237	25247519	25242237	25247519	-	ENST00000243189.11@RSRP1	ENST00000243189.11	protein_coding	25247309,25246444,25245150,25243550,25242237	25247519,25247029,25245301,25243633,25242705	Gene ID= ENSG00000117616.17 TPM= 4.25 Transcript Type= protein_coding
chr1	25242249	25247454	25242249	25247454	-	ENST00000498238.1@RSRP1	ENST00000498238.1	protein_coding	25247309,25246444,25243550,25242249	25247454,25247029,25245301,25242705	Gene ID= ENSG00000117616.17 TPM= 3.19 Transcript Type= retained_intron
chr1	25244072	25247446	25244072	25247446	-	ENST00000431849.3@RSRP1	ENST00000431849.3	protein_coding	25247309,25246444,25244072	25247446,25247029,25245301	Gene ID= ENSG00000117616.17 TPM= 4.25 Transcript Type= protein_coding
chr1	25247114	25248331	25247114	25248331	+	transcript2112.chr1.nnic@NA	transcript2112.chr1.nnic	NA	25247114	25248331	Gene ID= novel_gene_chr1_2113 TPM= 2.12 Transcript Type= NA
chr1	25337917	25362361	25337917	25362361	+	ENST00000374358.4@TMEM50A	ENST00000374358.4	protein_coding	25337917,25340474,25342961,25351626,25352882,25356793,25360660	25338456,25340579,25343073,25351693,25352974,25356853,25362361	Gene ID= ENSG00000183726.10 TPM= 25.49 Transcript Type= protein_coding
chr1	25338320	25361265	25338320	25361265	+	ENST00000491936.5@TMEM50A	ENST00000491936.5	protein_coding	25338320,25351626,25352882,25356793,25360660	25338456,25351693,25352974,25356853,25361265	Gene ID= ENSG00000183726.10 TPM= 3.19 Transcript Type= processed_transcript
chr1	25338317	25360967	25338317	25360967	+	ENST00000498135.5@TMEM50A	ENST00000498135.5	protein_coding	25338317,25340474,25351626,25352882,25356793,25360660	25338456,25340579,25351693,25352974,25356853,25360967	Gene ID= ENSG00000183726.10 TPM= 5.31 Transcript Type= processed_transcript
chr1	25362249	25420845	25362249	25420845	-	ENST00000294413.11@RHCE	ENST00000294413.11	protein_coding	25420639,25408683,25402596,25391994,25390749,25388976,25385711,25375349,25370467,25362249	25420845,25408869,25402746,25392141,25390915,25389113,25385844,25375428,25370540,25362553	Gene ID= ENSG00000188672.17 TPM= 1.06 Transcript Type= protein_coding
chr1	25430853	25485714	25430853	25485714	+	transcript2116.chr1.nic@TMEM57	transcript2116.chr1.nic	protein_coding	25430853,25446762,25448808,25454259,25456653,25458391,25484116,25485613	25431178,25446903,25448934,25454382,25456831,25458892,25484274,25485714	Gene ID= ENSG00000204178.9 TPM= 3.19 Transcript Type= NA
chr1	25543665	25563296	25543665	25563296	+	transcript2123.chr1.nic@LDLRAP1	transcript2123.chr1.nic	protein_coding	25543665,25553922,25554860,25557153,25562644,25563070	25543786,25554064,25554972,25557267,25562716,25563296	Gene ID= ENSG00000157978.11 TPM= 2.12 Transcript Type= NA
chr1	25543580	25568886	25543580	25568886	+	ENST00000374338.4@LDLRAP1	ENST00000374338.4	protein_coding	25543580,25553922,25554860,25557153,25562644,25563070,25563661,25565173,25566848	25543786,25554064,25554972,25557267,25562716,25563153,25563791,25565207,25568886	Gene ID= ENSG00000157978.11 TPM= 55.23 Transcript Type= protein_coding
chr1	25565546	25567164	25565546	25567164	-	transcript2127.chr1.nnic@NA	transcript2127.chr1.nnic	NA	25565546	25567164	Gene ID= novel_gene_chr1_2128 TPM= 3.19 Transcript Type= NA
chr1	25616795	25784450	25616795	25784450	+	transcript2130.chr1.nnic@MAN1C1	transcript2130.chr1.nnic	protein_coding	25616795,25686440,25749255,25753484,25758592,25763874,25771657,25780940,25782585,25783663	25618337,25686536,25749335,25753578,25758709,25763967,25771772,25781112,25782700,25784450	Gene ID= ENSG00000117643.14 TPM= 8.5 Transcript Type= NA
chr1	25800176	25818224	25800176	25818224	+	ENST00000361547.6@SELENON	ENST00000361547.6	protein_coding	25800176,25801043,25802016,25805142,25808580,25809026,25809683,25811454,25811691,25812687,25813881,25814077,25815548	25800413,25801160,25802117,25805275,25808789,25809150,25809820,25811535,25811879,25812792,25813993,25814178,25818224	Gene ID= ENSG00000162430.16 TPM= 29.21 Transcript Type= protein_coding
chr1	25800193	25818221	25800193	25818221	+	ENST00000374315.1@SELENON	ENST00000374315.1	protein_coding	25800193,25801043,25805142,25808580,25809026,25809683,25811454,25811691,25812687,25813881,25814077,25815548	25800413,25801160,25805275,25808789,25809150,25809820,25811535,25811879,25812792,25813993,25814178,25818221	Gene ID= ENSG00000162430.16 TPM= 31.33 Transcript Type= protein_coding
chr1	25819906	25832941	25819906	25832941	+	ENST00000374303.6@MTFR1L	ENST00000374303.6	protein_coding	25819906,25823019,25823644,25826302,25826615,25829509,25831921	25820029,25823128,25823748,25826411,25826826,25829830,25832941	Gene ID= ENSG00000117640.17 TPM= 253.23 Transcript Type= protein_coding
chr1	25819929	25832942	25819929	25832942	+	ENST00000474295.5@MTFR1L	ENST00000474295.5	protein_coding	25819929,25823019,25823644,25826302,25826615,25829618,25831921	25820029,25823128,25823748,25826411,25826826,25829830,25832942	Gene ID= ENSG00000117640.17 TPM= 52.49 Transcript Type= protein_coding
chr1	25820003	25832938	25820003	25832938	+	ENST00000374307.9@MTFR1L	ENST00000374307.9	protein_coding	25820003,25823019,25823644,25826302,25826615,25829545,25831921	25820029,25823128,25823748,25826411,25826826,25829830,25832938	Gene ID= ENSG00000117640.17 TPM= 16.36 Transcript Type= protein_coding
chr1	25820828	25832938	25820828	25832938	+	ENST00000374300.7@MTFR1L	ENST00000374300.7	protein_coding	25820828,25823019,25823644,25826302,25826615,25829509,25831921	25821003,25823128,25823748,25826411,25826826,25829830,25832938	Gene ID= ENSG00000117640.17 TPM= 22.25 Transcript Type= protein_coding
chr1	25820193	25832938	25820193	25832938	+	ENST00000374301.7@MTFR1L	ENST00000374301.7	protein_coding	25820193,25823019,25823644,25826302,25826615,25829509,25831921	25820414,25823128,25823748,25826411,25826826,25829830,25832938	Gene ID= ENSG00000117640.17 TPM= 23.31 Transcript Type= protein_coding
chr1	25900102	25906466	25900102	25906466	-	ENST00000455785.6@STMN1	ENST00000455785.6	protein_coding	25906389,25904664,25903641,25901491,25900102	25906466,25904738,25903813,25901682,25901087	Gene ID= ENSG00000117632.22 TPM= 3.19 Transcript Type= protein_coding
chr1	25959767	25998157	25959767	25998157	-	ENST00000374282.7@PAFAH2	ENST00000374282.7	protein_coding	25998025,25990727,25989448,25988231,25984460,25983946,25982364,25976682,25974480,25972558,25959767	25998157,25990863,25989601,25988327,25984528,25984087,25982477,25976773,25974650,25972712,25962083	Gene ID= ENSG00000158006.13 TPM= 3.19 Transcript Type= protein_coding
chr1	26021780	26036464	26021780	26036464	+	ENST00000374280.3@EXTL1	ENST00000374280.3	protein_coding	26021780,26029193,26029600,26030476,26031132,26031460,26032396,26033229,26033696,26034836,26035165	26023425,26029286,26029707,26030595,26031264,26031566,26032485,26033315,26033856,26035004,26036464	Gene ID= ENSG00000158008.9 TPM= 8.5 Transcript Type= protein_coding
chr1	26038022	26046133	26038022	26046133	-	ENST00000374276.3@SLC30A2	ENST00000374276.3	protein_coding	26045847,26044997,26044298,26043398,26042549,26041700,26039777,26038022	26046133,26045217,26044444,26043551,26042708,26041805,26039911,26039305	Gene ID= ENSG00000158014.14 TPM= 12.75 Transcript Type= protein_coding
chr1	26051304	26067633	26051304	26067633	-	ENST00000374272.3@TRIM63	ENST00000374272.3	protein_coding	26067336,26066268,26061166,26060266,26058390,26057628,26057203,26053893,26051304	26067633,26066440,26061334,26060361,26058623,26057650,26057327,26053964,26051883	Gene ID= ENSG00000158022.6 TPM= 55.23 Transcript Type= protein_coding
chr1	26169871	26170873	26169871	26170873	+	ENST00000374266.6@ZNF593	ENST00000374266.6	protein_coding	26169871,26170418,26170575	26170183,26170480,26170873	Gene ID= ENSG00000142684.8 TPM= 35.05 Transcript Type= protein_coding
chr1	26182015	26189882	26182015	26189882	+	transcript2202.chr1.nnic@CNKSR1	transcript2202.chr1.nnic	protein_coding	26182015,26182361,26182480,26183197,26183346,26183729,26184071,26184214,26184401,26184585,26185014,26187168,26187411,26188234,26188442,26188598,26188772,26189279	26182082,26182402,26182584,26183256,26183408,26183830,26184141,26184287,26184507,26184612,26185186,26187241,26187482,26188307,26188503,26188697,26188953,26189882	Gene ID= ENSG00000142675.17 TPM= 2.12 Transcript Type= NA
chr1	26234158	26278807	26234158	26278807	+	transcript2205.chr1.nnic@CEP85	transcript2205.chr1.nnic	protein_coding	26234158,26239762,26244166,26247194,26255171,26257597,26258143,26259617,26268483,26269460,26271014,26272021,26274964,26276535,26277136	26234310,26239838,26244318,26247232,26255865,26257730,26258260,26259802,26268635,26269614,26271107,26272071,26275071,26276760,26278807	Gene ID= ENSG00000130695.14 TPM= 4.25 Transcript Type= NA
chr1	26234153	26279038	26234153	26279038	+	ENST00000451429.6@CEP85	ENST00000451429.6	protein_coding	26234153,26239762,26255171,26257597,26258143,26259617,26268483,26269460,26271014,26272021,26274964,26276535,26277133	26234310,26239838,26255865,26257730,26258260,26259802,26268635,26269614,26271107,26272071,26275071,26276760,26279038	Gene ID= ENSG00000130695.14 TPM= 1.06 Transcript Type= protein_coding
chr1	26254624	26260515	26254624	26260515	+	transcript2213.chr1.nic@CEP85	transcript2213.chr1.nic	protein_coding	26254624,26255171,26257597,26258143,26259617	26254832,26255865,26257730,26258260,26260515	Gene ID= ENSG00000130695.14 TPM= 3.19 Transcript Type= NA
chr1	26234202	26278808	26234202	26278808	+	ENST00000252992.8@CEP85	ENST00000252992.8	protein_coding	26234202,26239762,26244166,26255171,26257597,26258143,26259617,26268483,26269460,26271014,26272021,26274964,26276535,26277133	26234310,26239838,26244318,26255865,26257730,26258260,26259802,26268635,26269614,26271107,26272071,26275071,26276760,26278808	Gene ID= ENSG00000130695.14 TPM= 23.37 Transcript Type= protein_coding
chr1	26280954	26281521	26280954	26281521	+	transcript2216.chr1.nnic@NA	transcript2216.chr1.nnic	NA	26280954	26281521	Gene ID= novel_gene_chr1_2217 TPM= 13.81 Transcript Type= NA
chr1	26282284	26306645	26282284	26306645	-	ENST00000374221.7@UBXN11	ENST00000374221.7	protein_coding	26306592,26303043,26302813,26301694,26300926,26297962,26297427,26296919,26294205,26285823,26285464,26284362,26284142,26282864,26282649,26282284	26306645,26303167,26302918,26301722,26301024,26298062,26297481,26296995,26294331,26286037,26285541,26284482,26284245,26282937,26282789,26282569	Gene ID= ENSG00000158062.20 TPM= 1.94 Transcript Type= protein_coding
chr1	26282281	26306640	26282281	26306640	-	ENST00000472155.5@UBXN11	ENST00000472155.5	protein_coding	26306592,26302813,26301694,26300926,26297962,26297427,26296919,26294205,26285823,26284362,26284142,26282864,26282649,26282281	26306640,26302918,26301722,26301024,26298062,26297481,26296995,26294331,26286037,26285541,26284245,26282937,26282789,26282569	Gene ID= ENSG00000158062.20 TPM= 1.41 Transcript Type= retained_intron
chr1	26282282	26306648	26282282	26306648	-	transcript2227.chr1.nic@UBXN11	transcript2227.chr1.nic	protein_coding	26306592,26301694,26297962,26297427,26296919,26294205,26285823,26285464,26284362,26284142,26282864,26282649,26282282	26306648,26301722,26298062,26297481,26296995,26294331,26286037,26285541,26284482,26284245,26282937,26282789,26282569	Gene ID= ENSG00000158062.20 TPM= 5.13 Transcript Type= NA
chr1	26317957	26320523	26317957	26320523	+	ENST00000374213.2@CD52	ENST00000374213.2	protein_coding	26317957,26320171	26318071,26320523	Gene ID= ENSG00000169442.8 TPM= 4.25 Transcript Type= protein_coding
chr1	26432401	26471294	26432401	26471294	+	transcript2246.chr1.nic@DHDDS	transcript2246.chr1.nic	protein_coding	26432401,26432891,26438168,26442731,26446316,26447559,26457791,26460037,26468895	26432518,26433008,26438284,26442873,26446432,26447660,26457905,26460144,26471294	Gene ID= ENSG00000117682.16 TPM= 15.93 Transcript Type= NA
chr1	26472434	26475968	26472434	26475968	+	transcript2259.chr1.nnic@NA	transcript2259.chr1.nnic	NA	26472434	26475968	Gene ID= novel_gene_chr1_2260 TPM= 5.31 Transcript Type= NA
chr1	26472519	26475972	26472519	26475972	+	ENST00000361427.5@HMGN2	ENST00000361427.5	protein_coding	26472519,26473483,26473703,26474085,26474572,26475113	26472627,26473527,26473732,26474135,26474667,26475972	Gene ID= ENSG00000198830.10 TPM= 268.55 Transcript Type= protein_coding
chr1	26472515	26475970	26472515	26475970	+	ENST00000619352.4@HMGN2	ENST00000619352.4	protein_coding	26472515,26472608,26473483,26473703,26474085,26474572,26475113	26472562,26472627,26473527,26473732,26474135,26474667,26475970	Gene ID= ENSG00000198830.10 TPM= 7.25 Transcript Type= protein_coding
chr1	26543112	26575014	26543112	26575014	+	ENST00000530003.5@RPS6KA1	ENST00000530003.5	protein_coding	26543112,26546867,26547189,26551397,26551644,26553391,26554214,26554596,26555151,26555537,26556654,26556998,26558807,26560726,26561045,26561505,26571449,26571849,26572176,26573224,26574079	26543221,26546983,26547270,26551477,26551723,26553497,26554251,26554738,26555221,26555625,26556718,26557100,26558937,26560851,26561134,26561663,26571610,26571925,26572293,26573361,26575014	Gene ID= ENSG00000117676.13 TPM= 1.06 Transcript Type= protein_coding
chr1	26787955	26798391	26787955	26798391	+	transcript2263.chr1.nnic@PIGV	transcript2263.chr1.nnic	protein_coding	26787955,26790759,26794113,26797563	26787989,26790893,26795214,26798391	Gene ID= ENSG00000060642.10 TPM= 2.12 Transcript Type= NA
chr1	26787995	26798398	26787995	26798398	+	ENST00000078527.8@PIGV	ENST00000078527.8	protein_coding	26787995,26790759,26794113,26797563	26788268,26790893,26795234,26798398	Gene ID= ENSG00000060642.10 TPM= 2.12 Transcript Type= protein_coding
chr1	26826699	26857602	26826699	26857602	+	transcript2271.chr1.nic@ZDHHC18	transcript2271.chr1.nic	protein_coding	26826699,26832447,26848608,26850301,26850558,26851129,26852753,26853726,26856185,26856848	26827139,26832607,26848757,26850438,26850606,26851231,26852865,26853825,26856262,26857602	Gene ID= ENSG00000204160.11 TPM= 4.25 Transcript Type= NA
chr1	26826699	26857597	26826699	26857597	+	transcript2272.chr1.nnic@ZDHHC18	transcript2272.chr1.nnic	protein_coding	26826699,26832447,26848608,26850301,26850558,26851129,26852753,26853726,26856848	26827139,26832607,26848757,26850438,26850606,26851231,26852865,26853825,26857597	Gene ID= ENSG00000204160.11 TPM= 2.12 Transcript Type= NA
chr1	26879376	26890311	26879376	26890311	-	transcript2275.chr1.nnic@GPN2	transcript2275.chr1.nnic	protein_coding	26889686,26888969,26886868,26885973,26884160,26879376	26890311,26889125,26886990,26886133,26884290,26879749	Gene ID= ENSG00000142751.14 TPM= 3.19 Transcript Type= NA
chr1	26890489	26900466	26890489	26900466	-	ENST00000361720.9@GPATCH3	ENST00000361720.9	protein_coding	26899992,26897301,26894236,26893389,26892670,26892411,26890489	26900466,26897725,26894410,26893448,26892791,26892538,26891226	Gene ID= ENSG00000198746.12 TPM= 11.68 Transcript Type= protein_coding
chr1	26911489	26913966	26911489	26913966	-	ENST00000254227.3@NR0B2	ENST00000254227.3	protein_coding	26913409,26911489	26913966,26912086	Gene ID= ENSG00000131910.4 TPM= 8.5 Transcript Type= protein_coding
chr1	26921726	26946862	26921726	26946862	+	ENST00000321265.9@NUDC	ENST00000321265.9	protein_coding	26921726,26924089,26941457,26941753,26942660,26942871,26945390,26945568,26946130	26921929,26924166,26941660,26941818,26942776,26943065,26945473,26945686,26946862	Gene ID= ENSG00000090273.13 TPM= 20.18 Transcript Type= protein_coding
chr1	26993697	27000656	26993697	27000656	+	transcript2312.chr1.nnic@TRNP1	transcript2312.chr1.nnic	protein_coding	26993697,26999847	26994606,27000656	Gene ID= ENSG00000253368.3 TPM= 2.12 Transcript Type= NA
chr1	26993707	27000898	26993707	27000898	+	ENST00000522111.2@TRNP1	ENST00000522111.2	protein_coding	26993707,26999847	26994612,27000898	Gene ID= ENSG00000253368.3 TPM= 21.24 Transcript Type= protein_coding
chr1	27005020	27012836	27005020	27012836	-	ENST00000289166.5@FAM46B	ENST00000289166.5	protein_coding	27012407,27005020	27012836,27006957	Gene ID= ENSG00000158246.7 TPM= 24.43 Transcript Type= protein_coding
chr1	27299554	27302579	27299554	27302579	+	transcript2319.chr1.nnic@NA	transcript2319.chr1.nnic	NA	27299554	27302579	Gene ID= novel_gene_chr1_2320 TPM= 2.12 Transcript Type= NA
chr1	27306484	27307628	27306484	27307628	-	transcript2323.chr1.nnic@NA	transcript2323.chr1.nnic	NA	27306484	27307628	Gene ID= novel_gene_chr1_2324 TPM= 7.44 Transcript Type= NA
chr1	27307330	27308502	27307330	27308502	+	transcript2321.chr1.nnic@NA	transcript2321.chr1.nnic	NA	27307330	27308502	Gene ID= novel_gene_chr1_2322 TPM= 2.12 Transcript Type= NA
chr1	27309627	27311115	27309627	27311115	-	transcript2325.chr1.nnic@NA	transcript2325.chr1.nnic	NA	27309627	27311115	Gene ID= novel_gene_chr1_2326 TPM= 3.19 Transcript Type= NA
chr1	27322160	27336400	27322160	27336400	+	ENST00000374076.8@TMEM222	ENST00000374076.8	protein_coding	27322160,27330720,27332070,27333958,27334151,27335379	27322391,27330804,27332101,27334054,27334281,27336400	Gene ID= ENSG00000186501.14 TPM= 39.83 Transcript Type= protein_coding
chr1	27332346	27336399	27332346	27336399	+	ENST00000471456.1@TMEM222	ENST00000471456.1	protein_coding	27332346,27334151,27335379	27334054,27334281,27336399	Gene ID= ENSG00000186501.14 TPM= 2.12 Transcript Type= retained_intron
chr1	27322247	27336400	27322247	27336400	+	ENST00000464720.5@TMEM222	ENST00000464720.5	protein_coding	27322247,27330720,27330985,27332070,27333958,27334151,27335379	27322391,27330804,27331137,27332101,27334054,27334281,27336400	Gene ID= ENSG00000186501.14 TPM= 9.03 Transcript Type= nonsense_mediated_decay
chr1	27342041	27353893	27342041	27353893	+	ENST00000616558.4@SYTL1	ENST00000616558.4	protein_coding	27342041,27345297,27347421,27347808,27347967,27349080,27349398,27349652,27349972,27350389,27350794,27351258,27351456,27353283,27353713	27342150,27345525,27347569,27347880,27348012,27349152,27349498,27349765,27350132,27350485,27350952,27351336,27351555,27353488,27353893	Gene ID= ENSG00000142765.17 TPM= 1.06 Transcript Type= protein_coding
chr1	27355186	27366858	27355186	27366858	-	ENST00000374040.7@MAP3K6	ENST00000374040.7	protein_coding	27366258,27364773,27364204,27363917,27363442,27362851,27362641,27362091,27361705,27361520,27361346,27361157,27360921,27360705,27360241,27359858,27359417,27358709,27358419,27358181,27357711,27357400,27357009,27356590,27356388,27356026,27355669,27355186	27366858,27364912,27364394,27364085,27363548,27363021,27362753,27362250,27361867,27361627,27361395,27361252,27361008,27360838,27360368,27359994,27359522,27358866,27358611,27358319,27357876,27357576,27357114,27356749,27356500,27356099,27355745,27355469	Gene ID= ENSG00000142733.14 TPM= 32.93 Transcript Type= protein_coding
chr1	27369110	27374845	27369110	27374845	-	transcript2345.chr1.nnic@FCN3	transcript2345.chr1.nnic	protein_coding	27374728,27374356,27373965,27373488,27373136,27370843,27370596,27369110	27374845,27374451,27374009,27373520,27373263,27370972,27370730,27370488	Gene ID= ENSG00000142748.12 TPM= 3.19 Transcript Type= NA
chr1	27369112	27374824	27369112	27374824	-	ENST00000354982.2@FCN3	ENST00000354982.2	protein_coding	27374728,27374356,27373965,27373136,27370843,27370596,27369112	27374824,27374451,27374009,27373263,27370972,27370730,27369477	Gene ID= ENSG00000142748.12 TPM= 9.56 Transcript Type= protein_coding
chr1	27369112	27374824	27369112	27374824	-	ENST00000270879.8@FCN3	ENST00000270879.8	protein_coding	27374728,27374356,27373965,27373488,27373136,27370843,27370596,27369112	27374824,27374451,27374009,27373520,27373263,27370972,27370730,27369477	Gene ID= ENSG00000142748.12 TPM= 44.61 Transcript Type= protein_coding
chr1	27392644	27395814	27392644	27395814	+	ENST00000374024.3@GPR3	ENST00000374024.3	protein_coding	27392644,27393794	27392737,27395814	Gene ID= ENSG00000181773.6 TPM= 6.37 Transcript Type= protein_coding
chr1	27416008	27490168	27416008	27490168	-	transcript2354.chr1.nic@WASF2	transcript2354.chr1.nic	protein_coding	27489986,27428761,27418954,27418269,27416008	27490168,27428933,27419088,27418422,27416102	Gene ID= ENSG00000158195.10 TPM= 21.24 Transcript Type= NA
chr1	27426514	27490168	27426514	27490168	-	transcript2355.chr1.nic@WASF2	transcript2355.chr1.nic	protein_coding	27489986,27426514	27490168,27428933	Gene ID= ENSG00000158195.10 TPM= 2.12 Transcript Type= NA
chr1	27404226	27490158	27404226	27490158	-	ENST00000618852.4@WASF2	ENST00000618852.4	protein_coding	27489986,27428761,27418954,27418269,27415985,27414833,27412572,27409692,27404226	27490158,27428933,27419088,27418422,27416102,27414963,27412727,27410206,27408346	Gene ID= ENSG00000158195.10 TPM= 46.74 Transcript Type= protein_coding
chr1	27552402	27554315	27552402	27554315	-	transcript2359.chr1.nnic@NA	transcript2359.chr1.nnic	NA	27552402	27554315	Gene ID= novel_gene_chr1_2360 TPM= 2.12 Transcript Type= NA
chr1	27666061	27672218	27666061	27672218	-	ENST00000361157.10@IFI6	ENST00000361157.10	protein_coding	27672123,27669245,27668458,27668226,27666061	27672218,27669346,27668535,27668375,27666475	Gene ID= ENSG00000126709.14 TPM= 32.4 Transcript Type= protein_coding
chr1	27666066	27672198	27666066	27672198	-	ENST00000362020.4@IFI6	ENST00000362020.4	protein_coding	27672123,27669233,27668458,27668226,27666066	27672198,27669346,27668535,27668375,27666475	Gene ID= ENSG00000126709.14 TPM= 7.97 Transcript Type= protein_coding
chr1	27773183	27824452	27773183	27824452	+	ENST00000373943.8@STX12	ENST00000373943.8	protein_coding	27773183,27789562,27793533,27801678,27810246,27812163,27817851,27819650,27822231	27773425,27789631,27793632,27801815,27810289,27812268,27817923,27819732,27824452	Gene ID= ENSG00000117758.13 TPM= 15.93 Transcript Type= protein_coding
chr1	27793996	27796263	27793996	27796263	-	transcript2374.chr1.nnic@NA	transcript2374.chr1.nnic	NA	27793996	27796263	Gene ID= novel_gene_chr1_2375 TPM= 2.12 Transcript Type= NA
chr1	27830778	27851676	27830778	27851676	+	ENST00000311772.9@PPP1R8	ENST00000311772.9	protein_coding	27830778,27832756,27838699,27841014,27843186,27847028,27850093	27830891,27832816,27838852,27841234,27843330,27847092,27851676	Gene ID= ENSG00000117751.17 TPM= 1.06 Transcript Type= protein_coding
chr1	27872568	27886673	27872568	27886673	+	ENST00000373921.7@THEMIS2	ENST00000373921.7	protein_coding	27872568,27876588,27879644,27881971,27885295,27885867	27872665,27876728,27880054,27883043,27885451,27886673	Gene ID= ENSG00000130775.15 TPM= 4.25 Transcript Type= protein_coding
chr1	27891524	27914743	27891524	27914743	-	ENST00000373912.7@RPA2	ENST00000373912.7	protein_coding	27914434,27914063,27907181,27906928,27897633,27897005,27894290,27894012,27891524	27914743,27914169,27907282,27907041,27897707,27897121,27894397,27894106,27892247	Gene ID= ENSG00000117748.9 TPM= 47.8 Transcript Type= protein_coding
chr1	27959944	27968094	27959944	27968094	+	transcript2380.chr1.nnic@XKR8	transcript2380.chr1.nnic	protein_coding	27959944,27963497,27965351,27965719,27966503	27960362,27963693,27965458,27965928,27968094	Gene ID= ENSG00000158156.7 TPM= 2.66 Transcript Type= NA
chr1	27959462	27968096	27959462	27968096	+	ENST00000373884.5@XKR8	ENST00000373884.5	protein_coding	27959462,27963497,27966503	27960362,27963693,27968096	Gene ID= ENSG00000158156.7 TPM= 3.72 Transcript Type= protein_coding
chr1	28095742	28096422	28095742	28096422	-	ENST00000436160.1@SPCS2P4	ENST00000436160.1	processed_pseudogene	28095742	28096422	Gene ID= ENSG00000228589.3 TPM= 4.25 Transcript Type= processed_pseudogene
chr1	28200559	28233025	28200559	28233025	-	ENST00000489277.5@DNAJC8	ENST00000489277.5	protein_coding	28232921,28230131,28228922,28214940,28210571,28209972,28208342,28205258,28203747,28200559	28233025,28230252,28229023,28214996,28210637,28210066,28208413,28205349,28203822,28201370	Gene ID= ENSG00000126698.10 TPM= 8.5 Transcript Type= processed_transcript
chr1	28209970	28233035	28209970	28233035	-	transcript2394.chr1.nic@DNAJC8	transcript2394.chr1.nic	protein_coding	28232921,28228922,28214940,28210571,28209970	28233035,28229023,28214996,28210637,28210066	Gene ID= ENSG00000126698.10 TPM= 5.31 Transcript Type= NA
chr1	28200278	28233025	28200278	28233025	-	ENST00000263697.5@DNAJC8	ENST00000263697.5	protein_coding	28232921,28228922,28214940,28210571,28209972,28208342,28205258,28203747,28200278	28233025,28229023,28214996,28210637,28210066,28208413,28205349,28203822,28201370	Gene ID= ENSG00000126698.10 TPM= 13.81 Transcript Type= protein_coding
chr1	28236133	28238100	28236133	28238100	+	ENST00000335514.9@ATPIF1	ENST00000335514.9	protein_coding	28236133,28236361,28237837	28236270,28236452,28238100	Gene ID= ENSG00000130770.17 TPM= 354.41 Transcript Type= protein_coding
chr1	28236109	28238105	28236109	28238105	+	ENST00000497986.5@ATPIF1	ENST00000497986.5	protein_coding	28236109,28236361,28237761	28236270,28236452,28238105	Gene ID= ENSG00000130770.17 TPM= 12.4 Transcript Type= protein_coding
chr1	28236154	28238098	28236154	28238098	+	ENST00000465645.1@ATPIF1	ENST00000465645.1	protein_coding	28236154,28236361	28236270,28238098	Gene ID= ENSG00000130770.17 TPM= 14.87 Transcript Type= protein_coding
chr1	28259527	28282491	28259527	28282491	+	ENST00000253063.3@SESN2	ENST00000253063.3	protein_coding	28259527,28269183,28271674,28272284,28272581,28273358,28274040,28274825,28279097,28280716	28259937,28269248,28271871,28272466,28272793,28273508,28274158,28275015,28279241,28282491	Gene ID= ENSG00000130766.4 TPM= 1.06 Transcript Type= protein_coding
chr1	28329038	28335967	28329038	28335967	+	ENST00000373842.8@MED18	ENST00000373842.8	protein_coding	28329038,28330597,28334417	28329180,28330735,28335967	Gene ID= ENSG00000130772.13 TPM= 7.44 Transcript Type= protein_coding
chr1	28369726	28497705	28369726	28497705	+	transcript2411.chr1.nnic@PHACTR4	transcript2411.chr1.nnic	protein_coding	28369726,28407410,28457832,28459085,28460212,28465685,28466382,28474077,28476107,28480451,28489170,28490951,28491650,28493015,28496534	28369825,28407463,28457855,28459258,28460292,28465849,28466535,28474151,28476291,28480604,28489225,28491012,28491787,28493091,28497705	Gene ID= ENSG00000204138.12 TPM= 4.25 Transcript Type= NA
chr1	28369603	28500369	28369603	28500369	+	ENST00000373839.7@PHACTR4	ENST00000373839.7	protein_coding	28369603,28407410,28459085,28460212,28465685,28466382,28473554,28476107,28480451,28489170,28490951,28491650,28493015,28496534	28369825,28407463,28459258,28460292,28465849,28466768,28474151,28476291,28480604,28489225,28491012,28491787,28493091,28500369	Gene ID= ENSG00000204138.12 TPM= 10.62 Transcript Type= protein_coding
chr1	28505980	28510892	28505980	28510892	+	ENST00000413987.1@SNHG3	ENST00000413987.1	sense_intronic	28505980,28508128,28508830	28506084,28508160,28510892	Gene ID= ENSG00000242125.3 TPM= 8.5 Transcript Type= retained_intron
chr1	28506351	28509633	28506351	28509633	+	ENST00000437681.1@SNHG3	ENST00000437681.1	sense_intronic	28506351,28508830	28508160,28509633	Gene ID= ENSG00000242125.3 TPM= 2.12 Transcript Type= retained_intron
chr1	28511669	28513965	28511669	28513965	-	transcript2424.chr1.nnic@NA	transcript2424.chr1.nnic	NA	28511669	28513965	Gene ID= novel_gene_chr1_2425 TPM= 2.12 Transcript Type= NA
chr1	28553085	28578545	28553085	28578545	+	ENST00000373830.4@TRNAU1AP	ENST00000373830.4	protein_coding	28553085,28553640,28560633,28561346,28564703,28567294,28571176,28571867,28577500	28553137,28553737,28560732,28561398,28564834,28567413,28571338,28571900,28578545	Gene ID= ENSG00000180098.9 TPM= 2.12 Transcript Type= protein_coding
chr1	28560281	28561895	28560281	28561895	-	transcript2442.chr1.nnic@NA	transcript2442.chr1.nnic	NA	28560281	28561895	Gene ID= novel_gene_chr1_2443 TPM= 2.12 Transcript Type= NA
chr1	28578538	28581842	28578538	28581842	-	ENST00000461448.5@SNHG12	ENST00000461448.5	antisense_RNA	28581590,28581111,28579533,28578538	28581842,28581229,28580646,28578680	Gene ID= ENSG00000197989.13 TPM= 1.06 Transcript Type= retained_intron
chr1	28578538	28581834	28578538	28581834	-	ENST00000531126.5@SNHG12	ENST00000531126.5	antisense_RNA	28581590,28581111,28580560,28579912,28579533,28578538	28581834,28581229,28580646,28579981,28579587,28578680	Gene ID= ENSG00000197989.13 TPM= 1.06 Transcript Type= antisense_RNA
chr1	28603101	28643101	28603101	28643101	-	transcript2432.chr1.nic@TAF12	transcript2432.chr1.nic	protein_coding	28642992,28623946,28621914,28617953,28613247,28605372,28603101	28643101,28624030,28622165,28618030,28613361,28605460,28603574	Gene ID= ENSG00000120656.11 TPM= 6.37 Transcript Type= NA
chr1	28668732	28719353	28668732	28719353	+	ENST00000373816.5@GMEB1	ENST00000373816.5	protein_coding	28668732,28683583,28690104,28691585,28692942,28696927,28702438,28704192,28710520,28714073	28668839,28683740,28690186,28691709,28693045,28697084,28702569,28704329,28710642,28719353	Gene ID= ENSG00000162419.12 TPM= 2.12 Transcript Type= protein_coding
chr1	28683564	28715065	28683564	28715065	+	ENST00000480454.1@GMEB1	ENST00000480454.1	protein_coding	28683564,28690074,28691585,28692942,28696927,28702438,28704192,28710520,28714073	28683740,28690186,28691709,28693045,28697084,28702569,28704329,28710642,28715065	Gene ID= ENSG00000162419.12 TPM= 1.06 Transcript Type= processed_transcript
chr1	28668778	28714886	28668778	28714886	+	ENST00000361872.8@GMEB1	ENST00000361872.8	protein_coding	28668778,28683586,28690104,28691585,28692942,28696927,28702438,28704192,28710520,28714073	28668839,28683740,28690186,28691709,28693045,28697084,28702569,28704329,28710642,28714886	Gene ID= ENSG00000162419.12 TPM= 2.12 Transcript Type= protein_coding
chr1	28717333	28718207	28717333	28718207	+	transcript2447.chr1.nnic@NA	transcript2447.chr1.nnic	NA	28717333	28718207	Gene ID= novel_gene_chr1_2448 TPM= 3.19 Transcript Type= NA
chr1	28736759	28769775	28736759	28769775	+	ENST00000373812.7@YTHDF2	ENST00000373812.7	protein_coding	28736759,28737658,28738259,28742403,28768929	28737147,28737682,28738338,28743986,28769775	Gene ID= ENSG00000198492.15 TPM= 66.92 Transcript Type= protein_coding
chr1	28736920	28769759	28736920	28769759	+	transcript2453.chr1.nnic@YTHDF2	transcript2453.chr1.nnic	protein_coding	28736920,28737658,28738259,28768929	28737147,28737682,28738338,28769759	Gene ID= ENSG00000198492.15 TPM= 2.12 Transcript Type= NA
chr1	28887079	29053311	28887079	29053311	+	transcript2457.chr1.nic@EPB41	transcript2457.chr1.nic	protein_coding	28887079,28987448,28993330,28997215,29011865,29015692,29018224,29030400,29033093,29035826,29039254,29053104	28887210,28987905,28993542,28997319,29011907,29015767,29018442,29030487,29033245,29035923,29039426,29053311	Gene ID= ENSG00000159023.19 TPM= 4.25 Transcript Type= NA
chr1	28887091	29120046	28887091	29120046	+	ENST00000356093.6@EPB41	ENST00000356093.6	protein_coding	28887091,28987431,28993330,28997215,29011865,29015692,29018224,29030400,29033093,29035826,29039254,29053104,29060422,29064982,29097807,29109336,29112368,29115699,29116819	28887210,28987905,28993542,28997319,29011907,29015767,29018442,29030487,29033245,29035923,29039426,29053312,29060484,29065158,29097935,29109437,29112448,29115803,29120046	Gene ID= ENSG00000159023.19 TPM= 5.31 Transcript Type= protein_coding
chr1	29119428	29123935	29119428	29123935	-	ENST00000521452.1@TMEM200B	ENST00000521452.1	protein_coding	29123856,29119428	29123935,29121848	Gene ID= ENSG00000253304.1 TPM= 6.37 Transcript Type= protein_coding
chr1	29147743	29181987	29147743	29181987	-	ENST00000373795.6@SRSF4	ENST00000373795.6	protein_coding	29181646,29160375,29159374,29154696,29150103,29147743	29181987,29160517,29159486,29154910,29150192,29149226	Gene ID= ENSG00000116350.16 TPM= 125.33 Transcript Type= protein_coding
chr1	29178522	29181890	29178522	29181890	-	transcript2477.chr1.nnic@NA	transcript2477.chr1.nnic	NA	29178522	29181890	Gene ID= novel_gene_chr1_2478 TPM= 9.56 Transcript Type= NA
chr1	29193817	29230945	29193817	29230945	-	transcript2482.chr1.nic@MECR	transcript2482.chr1.nic	protein_coding	29230731,29220838,29216588,29216005,29206762,29203131,29201943,29200516,29196198,29195941,29193817	29230945,29220921,29216685,29216136,29206905,29203233,29202045,29200589,29196258,29196013,29194179	Gene ID= ENSG00000116353.15 TPM= 3.72 Transcript Type= NA
chr1	29192873	29230924	29192873	29230924	-	ENST00000373791.7@MECR	ENST00000373791.7	protein_coding	29230731,29216588,29216005,29206762,29203131,29201943,29200516,29196198,29195941,29192873	29230924,29216812,29216136,29206905,29203233,29202045,29200589,29196258,29196013,29194179	Gene ID= ENSG00000116353.15 TPM= 5.31 Transcript Type= protein_coding
chr1	29193817	29230932	29193817	29230932	-	ENST00000263702.10@MECR	ENST00000263702.10	protein_coding	29230731,29216588,29216005,29206762,29203131,29201943,29200516,29196198,29195941,29193817	29230932,29216685,29216136,29206905,29203233,29202045,29200589,29196258,29196013,29194179	Gene ID= ENSG00000116353.15 TPM= 49.39 Transcript Type= protein_coding
chr1	30732469	30757820	30732469	30757820	-	ENST00000294507.3@LAPTM5	ENST00000294507.3	protein_coding	30757659,30742456,30741640,30739809,30738940,30737604,30735173,30732469	30757820,30742549,30741716,30739937,30739062,30737699,30735265,30733917	Gene ID= ENSG00000162511.7 TPM= 11.68 Transcript Type= protein_coding
chr1	30869669	30872287	30869669	30872287	-	transcript2503.chr1.nnic@NA	transcript2503.chr1.nnic	NA	30869669	30872287	Gene ID= novel_gene_chr1_2504 TPM= 5.31 Transcript Type= NA
chr1	30932826	31065722	30932826	31065722	-	transcript2516.chr1.nic@PUM1	transcript2516.chr1.nic	protein_coding	31065616,31059204,31028796,31006994,31005853,30995054,30992390,30981312,30980062,30974651,30968354,30967167,30965982,30964674,30953714,30952234,30950133,30945346,30941998,30941151,30936643,30932826	31065722,31059577,31028864,31007102,31006031,30995220,30992660,30981405,30980163,30974802,30968492,30967310,30966197,30964910,30953981,30952363,30950261,30945483,30942123,30941272,30936835,30933342	Gene ID= ENSG00000134644.15 TPM= 3.19 Transcript Type= NA
chr1	30932826	31065722	30932826	31065722	-	transcript2518.chr1.nic@PUM1	transcript2518.chr1.nic	protein_coding	31065616,31059204,31028796,31006994,31005853,30995054,30992390,30981312,30980062,30974651,30968354,30967167,30965982,30964674,30953714,30952234,30950133,30945346,30941998,30941151,30936643,30932826	31065722,31059577,31028864,31007102,31006031,30995220,30992660,30981405,30980166,30974802,30968492,30967310,30966278,30964910,30953981,30952363,30950261,30945483,30942123,30941272,30936835,30933342	Gene ID= ENSG00000134644.15 TPM= 3.19 Transcript Type= NA
chr1	30931506	31065704	30931506	31065704	-	ENST00000373747.7@PUM1	ENST00000373747.7	protein_coding	31065616,31059204,31028796,31006994,31005853,30995054,30992390,30981312,30980062,30974651,30968354,30967167,30965982,30964674,30953714,30952234,30950127,30945346,30941998,30941151,30936643,30931506	31065704,31059577,31028864,31007102,31006031,30995220,30992660,30981405,30980166,30974802,30968492,30967310,30966278,30964910,30953981,30952363,30950261,30945483,30942123,30941272,30936835,30933342	Gene ID= ENSG00000134644.15 TPM= 7.44 Transcript Type= protein_coding
chr1	30931506	31065698	30931506	31065698	-	ENST00000257075.9@PUM1	ENST00000257075.9	protein_coding	31065616,31059204,31028796,31006994,31005853,30995054,30992390,30981312,30980062,30974651,30968354,30967167,30965982,30964674,30953714,30952234,30950133,30945346,30941998,30941151,30936643,30931506	31065698,31059577,31028864,31007102,31006031,30995220,30992660,30981405,30980163,30974802,30968492,30967310,30966278,30964910,30953981,30952363,30950261,30945483,30942123,30941272,30936835,30933342	Gene ID= ENSG00000134644.15 TPM= 7.44 Transcript Type= protein_coding
chr1	30932826	31065695	30932826	31065695	-	ENST00000426105.6@PUM1	ENST00000426105.6	protein_coding	31065616,31059204,31028796,31006994,31005853,30995054,30992390,30981312,30980062,30974651,30968354,30967167,30965982,30964674,30953714,30952234,30950127,30945346,30941998,30941151,30936643,30932826	31065695,31059577,31028864,31007102,31006031,30995220,30992660,30981405,30980163,30974802,30968492,30967310,30966278,30964910,30953981,30952363,30950261,30945483,30942123,30941272,30936835,30933342	Gene ID= ENSG00000134644.15 TPM= 21.24 Transcript Type= protein_coding
chr1	30932844	31065684	30932844	31065684	-	ENST00000440538.6@PUM1	ENST00000440538.6	protein_coding	31065616,31059204,31028796,31006994,31005853,30995054,30992390,30981312,30980062,30974651,30968354,30967167,30965982,30964674,30953714,30952234,30950127,30945346,30941998,30941151,30936643,30932844	31065684,31059577,31028864,31007102,31006031,30995220,30992660,30981405,30980166,30974802,30968492,30967310,30966197,30964910,30953981,30952363,30950261,30945483,30942123,30941272,30936835,30933342	Gene ID= ENSG00000134644.15 TPM= 10.62 Transcript Type= protein_coding
chr1	31259568	31296770	31259568	31296770	-	ENST00000263694.8@SNRNP40	ENST00000263694.8	protein_coding	31296611,31293219,31291913,31289254,31281374,31271379,31269158,31267871,31261529,31259568	31296770,31293348,31292006,31289419,31281496,31271499,31269240,31267932,31261632,31260121	Gene ID= ENSG00000060688.12 TPM= 3.19 Transcript Type= protein_coding
chr1	31297008	31364936	31297008	31364936	+	ENST00000373714.5@ZCCHC17	ENST00000373714.5	protein_coding	31297008,31310044,31319109,31337175,31338957,31346640,31348829,31364032	31297213,31310164,31319166,31337275,31339048,31346740,31348974,31364936	Gene ID= ENSG00000121766.15 TPM= 2.12 Transcript Type= protein_coding
chr1	31296964	31349232	31296964	31349232	+	transcript2535.chr1.nic@ZCCHC17	transcript2535.chr1.nic	protein_coding	31296964,31310044,31319109,31337175,31338957,31346640,31348829	31297075,31310164,31319166,31337275,31339048,31346740,31349232	Gene ID= ENSG00000121766.15 TPM= 2.12 Transcript Type= NA
chr1	31296982	31364953	31296982	31364953	+	ENST00000615916.4@ZCCHC17	ENST00000615916.4	protein_coding	31296982,31319109,31337175,31338957,31346640,31348829,31364032	31297213,31319166,31337275,31339048,31346740,31348974,31364953	Gene ID= ENSG00000121766.15 TPM= 2.12 Transcript Type= protein_coding
chr1	31296995	31364936	31296995	31364936	+	ENST00000344147.9@ZCCHC17	ENST00000344147.9	protein_coding	31296995,31310044,31319109,31337175,31338957,31346640,31348829,31364032	31297075,31310164,31319166,31337275,31339048,31346740,31348974,31364936	Gene ID= ENSG00000121766.15 TPM= 14.87 Transcript Type= protein_coding
chr1	31296998	31348968	31296998	31348968	+	ENST00000479629.5@ZCCHC17	ENST00000479629.5	protein_coding	31296998,31310044,31318167,31319109,31337175,31338957,31346640,31348829	31297075,31310164,31318236,31319166,31337275,31339048,31346740,31348968	Gene ID= ENSG00000121766.15 TPM= 1.06 Transcript Type= processed_transcript
chr1	31359590	31373079	31359590	31373079	-	transcript2569.chr1.nnic@FABP3	transcript2569.chr1.nnic	protein_coding	31372942,31369385,31367393,31359590	31373079,31369557,31367494,31360830	Gene ID= ENSG00000121769.7 TPM= 106.78 Transcript Type= NA
chr1	31365625	31373076	31365625	31373076	-	ENST00000373713.6@FABP3	ENST00000373713.6	protein_coding	31372942,31369385,31367393,31365625	31373076,31369557,31367494,31365939	Gene ID= ENSG00000121769.7 TPM= 2413.34 Transcript Type= protein_coding
chr1	31365721	31373073	31365721	31373073	-	ENST00000498148.5@FABP3	ENST00000498148.5	protein_coding	31372942,31369385,31369070,31367393,31365721	31373073,31369557,31369136,31367494,31365939	Gene ID= ENSG00000121769.7 TPM= 3.29 Transcript Type= nonsense_mediated_decay
chr1	31413116	31434678	31413116	31434678	+	ENST00000373709.7@SERINC2	ENST00000373709.7	protein_coding	31413116,31423693,31424683,31425330,31425776,31426654,31428978,31429397,31432967,31434064	31413304,31423854,31424873,31425409,31425913,31426823,31429068,31429538,31433185,31434678	Gene ID= ENSG00000168528.11 TPM= 5.31 Transcript Type= protein_coding
chr1	31417854	31420092	31417854	31420092	-	transcript2614.chr1.nnic@NA	transcript2614.chr1.nnic	NA	31417854	31420092	Gene ID= novel_gene_chr1_2615 TPM= 3.19 Transcript Type= NA
chr1	31576515	31587686	31576515	31587686	+	transcript2628.chr1.nic@TINAGL1	transcript2628.chr1.nic	protein_coding	31576515,31577134,31579204,31583149,31583461,31584678,31584886,31585151,31585440,31585753,31586839	31576595,31577458,31579267,31583241,31583575,31584801,31585036,31585340,31585485,31586755,31587686	Gene ID= ENSG00000142910.15 TPM= 20.05 Transcript Type= NA
chr1	31576511	31587686	31576511	31587686	+	transcript2630.chr1.nic@TINAGL1	transcript2630.chr1.nic	protein_coding	31576511,31579204,31583149,31583461,31584678,31584886,31585151,31585440,31585753,31586710,31586839	31576595,31579267,31583241,31583575,31584801,31585036,31585340,31585485,31585876,31586755,31587686	Gene ID= ENSG00000142910.15 TPM= 27.4 Transcript Type= NA
chr1	31576535	31587686	31576535	31587686	+	ENST00000271064.11@TINAGL1	ENST00000271064.11	protein_coding	31576535,31577134,31579204,31583149,31583461,31584678,31584886,31585151,31585440,31585753,31586710,31586839	31576595,31577458,31579267,31583241,31583575,31584801,31585036,31585340,31585485,31585876,31586755,31587686	Gene ID= ENSG00000142910.15 TPM= 363.31 Transcript Type= protein_coding
chr1	31629862	31644887	31629862	31644887	-	ENST00000373703.4@PEF1	ENST00000373703.4	protein_coding	31644841,31635222,31633159,31632495,31629862	31644887,31635522,31633314,31632638,31630842	Gene ID= ENSG00000162517.12 TPM= 79.66 Transcript Type= protein_coding
chr1	31652247	31704319	31652247	31704319	-	ENST00000373672.7@COL16A1	ENST00000373672.7	protein_coding	31703837,31702121,31700041,31699813,31698483,31697906,31697220,31696963,31696088,31695761,31695186,31694144,31693092,31692767,31692598,31692474,31692005,31691598,31691417,31691188,31690529,31690367,31689741,31689050,31688861,31688467,31686244,31686091,31685639,31684821,31684523,31684109,31683950,31683707,31683334,31683194,31682934,31681023,31680905,31680042,31679804,31679632,31675258,31675007,31672724,31672596,31672416,31671615,31670602,31668802,31668165,31667575,31666037,31665882,31665583,31665172,31662587,31662334,31661660,31661414,31661066,31660585,31658914,31658488,31657033,31656400,31655314,31654792,31653867,31653599,31652247	31704319,31702227,31700115,31699930,31698606,31698172,31697300,31697088,31696141,31695787,31695221,31694170,31693154,31692808,31692642,31692509,31692067,31691642,31691512,31691226,31690573,31690393,31689851,31689085,31688971,31688502,31686279,31686135,31685770,31684856,31684630,31684231,31684003,31683748,31683369,31683247,31683002,31681067,31680931,31680101,31679851,31679685,31675311,31675039,31672840,31672637,31672502,31671659,31670646,31668855,31668218,31667628,31666081,31665935,31665618,31665234,31662658,31662387,31661704,31661458,31661119,31660638,31658964,31658577,31657068,31656444,31655502,31654858,31654043,31653676,31652853	Gene ID= ENSG00000084636.17 TPM= 1.06 Transcript Type= protein_coding
chr1	31652511	31704198	31652511	31704198	-	transcript2656.chr1.nic@COL16A1	transcript2656.chr1.nic	protein_coding	31703837,31702121,31700041,31699813,31698483,31697906,31697220,31696963,31696088,31695761,31695186,31694144,31693092,31692767,31692598,31692474,31692005,31691598,31691417,31691188,31690529,31690367,31689741,31689050,31688861,31688467,31686244,31686091,31685639,31684821,31684523,31684109,31683950,31683707,31683334,31683194,31682934,31681023,31680905,31680042,31679804,31679632,31675258,31675007,31672724,31672596,31672416,31671615,31668802,31668165,31667575,31666037,31665882,31665583,31665172,31662587,31662334,31661660,31661414,31661066,31660585,31658914,31658488,31657033,31656400,31655314,31654792,31653867,31653599,31652511	31704198,31702227,31700115,31699930,31698606,31698172,31697300,31697088,31696141,31695787,31695221,31694170,31693154,31692808,31692642,31692509,31692067,31691642,31691512,31691226,31690573,31690393,31689851,31689085,31688971,31688502,31686279,31686135,31685770,31684856,31684630,31684231,31684003,31683748,31683369,31683247,31683002,31681067,31680931,31680101,31679851,31679685,31675311,31675039,31672840,31672637,31672502,31671659,31668855,31668218,31667628,31666081,31665935,31665618,31665234,31662658,31662387,31661704,31661458,31661119,31660638,31658964,31658577,31657068,31656444,31655502,31654858,31654043,31653676,31652853	Gene ID= ENSG00000084636.17 TPM= 3.19 Transcript Type= NA
chr1	31652511	31704003	31652511	31704003	-	transcript2660.chr1.nic@COL16A1	transcript2660.chr1.nic	protein_coding	31703837,31702121,31700041,31699813,31698483,31697906,31697220,31696963,31696088,31695761,31695186,31694144,31693092,31692767,31692598,31692474,31692005,31691598,31691417,31691188,31690529,31690367,31689741,31689050,31688861,31688467,31686244,31686091,31685639,31684821,31684523,31684109,31683950,31683707,31683334,31683194,31682934,31681023,31680905,31680042,31679632,31675258,31675007,31672724,31672596,31672416,31671615,31668802,31668165,31667575,31666037,31665882,31665583,31665172,31662587,31662334,31661660,31661414,31661066,31660585,31658914,31658488,31657033,31656400,31655314,31654792,31653867,31653599,31652511	31704003,31702227,31700115,31699930,31698606,31698172,31697300,31697088,31696141,31695787,31695221,31694170,31693154,31692808,31692642,31692509,31692067,31691642,31691512,31691226,31690573,31690393,31689851,31689085,31688971,31688502,31686279,31686135,31685770,31684856,31684630,31684231,31684003,31683748,31683369,31683247,31683002,31681067,31680931,31680101,31679685,31675311,31675039,31672840,31672637,31672502,31671659,31668855,31668218,31667628,31666081,31665935,31665618,31665234,31662658,31662387,31661704,31661458,31661119,31660638,31658964,31658577,31657068,31656444,31655502,31654858,31654043,31653676,31652853	Gene ID= ENSG00000084636.17 TPM= 5.31 Transcript Type= NA
chr1	31652511	31675396	31652511	31675396	-	transcript2667.chr1.nic@COL16A1	transcript2667.chr1.nic	protein_coding	31675258,31675007,31672724,31672596,31672416,31671615,31668802,31668165,31667575,31666037,31665882,31665583,31665172,31662587,31662334,31661660,31661414,31661066,31660585,31658914,31658488,31657033,31656400,31655314,31654792,31653867,31653599,31652511	31675396,31675039,31672840,31672637,31672502,31671659,31668855,31668218,31667628,31666081,31665935,31665618,31665234,31662658,31662387,31661704,31661458,31661119,31660638,31658964,31658577,31657068,31656444,31655502,31654858,31654043,31653676,31652853	Gene ID= ENSG00000084636.17 TPM= 3.19 Transcript Type= NA
chr1	31670191	31671067	31670191	31671067	+	transcript2680.chr1.nnic@NA	transcript2680.chr1.nnic	NA	31670191,31670832	31670352,31671067	Gene ID= novel_gene_chr1_2681 TPM= 2.12 Transcript Type= NA
chr1	31727117	31759423	31727117	31759423	-	ENST00000398556.7@ADGRB2	ENST00000398556.7	protein_coding	31759321,31755999,31744648,31742838,31742053,31741800,31741624,31741373,31740347,31740110,31739926,31739308,31738832,31738587,31738200,31737652,31737429,31736573,31736321,31735827,31735580,31732972,31732517,31732115,31730800,31728598,31728182,31728025,31727117	31759423,31756815,31744731,31743002,31742217,31741967,31741725,31741479,31740541,31740178,31740034,31739635,31738937,31738630,31738326,31737755,31737531,31736723,31736390,31735893,31735665,31733143,31732612,31732154,31731419,31728633,31728280,31728081,31727605	Gene ID= ENSG00000121753.12 TPM= 8.5 Transcript Type= protein_coding
chr1	31906421	31919483	31906421	31919483	-	ENST00000602725.5@PTP4A2	ENST00000602725.5	protein_coding	31918970,31915895,31911696,31910038,31906421	31919483,31915987,31911826,31910112,31908960	Gene ID= ENSG00000184007.18 TPM= 45.94 Transcript Type= protein_coding
chr1	32013829	32043882	32013829	32043882	+	ENST00000327300.11@KHDRBS1	ENST00000327300.11	protein_coding	32013829,32030298,32031524,32033188,32036910,32037835,32038552,32039515,32042527	32014377,32030422,32031640,32033334,32037043,32038036,32038619,32039573,32043882	Gene ID= ENSG00000121774.17 TPM= 98.78 Transcript Type= protein_coding
chr1	32072902	32102861	32072902	32102861	+	ENST00000336294.9@TMEM39B	ENST00000336294.9	protein_coding	32072902,32074951,32075603,32076763,32077164,32091675,32094784,32100442,32102431	32073051,32075077,32075822,32076846,32077318,32092011,32094971,32100562,32102861	Gene ID= ENSG00000121775.17 TPM= 8.5 Transcript Type= protein_coding
chr1	32108038	32176568	32108038	32176568	+	ENST00000373625.7@KPNA6	ENST00000373625.7	protein_coding	32108038,32154588,32156853,32157346,32158267,32159400,32160615,32161947,32162361,32163235,32166105,32167169,32169882,32170707	32108134,32154721,32156945,32157445,32158361,32159531,32160703,32162046,32162524,32163313,32166230,32167296,32170060,32176568	Gene ID= ENSG00000025800.13 TPM= 233.68 Transcript Type= protein_coding
chr1	32179686	32198285	32179686	32198285	+	ENST00000373610.7@TXLNA	ENST00000373610.7	protein_coding	32179686,32180314,32181242,32184525,32187954,32190055,32192311,32192657,32193208,32194065,32194902	32179776,32180514,32181577,32184616,32188124,32190249,32192430,32192731,32193300,32194160,32198285	Gene ID= ENSG00000084652.15 TPM= 132.77 Transcript Type= protein_coding
chr1	32183731	32185690	32183731	32185690	-	transcript2729.chr1.nnic@NA	transcript2729.chr1.nnic	NA	32183731	32185690	Gene ID= novel_gene_chr1_2730 TPM= 2.12 Transcript Type= NA
chr1	32200386	32205387	32200386	32205387	+	ENST00000373602.9@CCDC28B	ENST00000373602.9	protein_coding	32200386,32201913,32203879,32204186,32204598,32205194	32200709,32202099,32204045,32204379,32204620,32205387	Gene ID= ENSG00000160050.14 TPM= 13.81 Transcript Type= protein_coding
chr1	32200622	32205387	32200622	32205387	+	transcript2738.chr1.nic@CCDC28B	transcript2738.chr1.nic	protein_coding	32200622,32201913,32203879,32204598,32205194	32200709,32202099,32204045,32204620,32205387	Gene ID= ENSG00000160050.14 TPM= 4.25 Transcript Type= NA
chr1	32205661	32208687	32205661	32208687	+	ENST00000291358.10@IQCC	ENST00000291358.10	protein_coding	32205661,32206154,32206509,32207002,32207240	32205723,32206297,32206761,32207120,32208687	Gene ID= ENSG00000160051.11 TPM= 1.06 Transcript Type= protein_coding
chr1	32212192	32212955	32212192	32212955	+	transcript2741.chr1.nnic@NA	transcript2741.chr1.nnic	NA	32212192	32212955	Gene ID= novel_gene_chr1_2742 TPM= 3.19 Transcript Type= NA
chr1	32214477	32222333	32214477	32222333	-	ENST00000491434.5@TMEM234	ENST00000491434.5	protein_coding	32222307,32221867,32221131,32217437,32217259,32216889,32216384,32216194,32215673,32215136,32214477	32222333,32222018,32221197,32217577,32217351,32216947,32216517,32216281,32215795,32215216,32215049	Gene ID= ENSG00000160055.19 TPM= 1.06 Transcript Type= nonsense_mediated_decay
chr1	32216197	32222325	32216197	32222325	-	ENST00000309777.10@TMEM234	ENST00000309777.10	protein_coding	32222307,32221867,32221131,32217259,32216197	32222325,32222018,32221197,32217351,32216947	Gene ID= ENSG00000160055.19 TPM= 8.5 Transcript Type= protein_coding
chr1	32222370	32231604	32222370	32231604	+	ENST00000373586.1@EIF3I	ENST00000373586.1	protein_coding	32222370,32222538,32224034,32224410,32226171,32226403,32228499,32228727,32229135,32230927,32231115	32222444,32222630,32224121,32224475,32226320,32226530,32228609,32228816,32229208,32231019,32231604	Gene ID= ENSG00000084623.11 TPM= 103.03 Transcript Type= protein_coding
chr1	32222441	32231604	32222441	32231604	+	transcript2747.chr1.nic@EIF3I	transcript2747.chr1.nic	protein_coding	32222441,32224034,32224410,32226171,32226403,32228499,32228727,32229135,32230927,32231115	32222630,32224121,32224475,32226320,32226530,32228609,32228816,32229208,32231019,32231604	Gene ID= ENSG00000084623.11 TPM= 14.87 Transcript Type= NA
chr1	32229933	32241649	32229933	32241649	-	transcript2751.chr1.nnic@MTMR9LP	transcript2751.chr1.nnic	transcribed_unprocessed_pseudogene	32241407,32239869,32239295,32234952,32234704,32232042,32229933	32241649,32240089,32239425,32235113,32234814,32232184,32231969	Gene ID= ENSG00000220785.7 TPM= 3.19 Transcript Type= NA
chr1	32231660	32240422	32231660	32240422	-	ENST00000403496.6@MTMR9LP	ENST00000403496.6	transcribed_unprocessed_pseudogene	32239869,32234952,32232042,32231660	32240422,32235113,32232184,32231969	Gene ID= ENSG00000220785.7 TPM= 1.06 Transcript Type= processed_transcript
chr1	32233495	32240431	32233495	32240431	-	transcript2759.chr1.nic@MTMR9LP	transcript2759.chr1.nic	transcribed_unprocessed_pseudogene	32239869,32239295,32233495	32240431,32239425,32235113	Gene ID= ENSG00000220785.7 TPM= 3.19 Transcript Type= NA
chr1	32247233	32248856	32247233	32248856	+	ENST00000373582.3@FAM167B	ENST00000373582.3	protein_coding	32247233,32248371	32247682,32248856	Gene ID= ENSG00000183615.5 TPM= 4.25 Transcript Type= protein_coding
chr1	32251239	32286165	32251239	32286165	+	ENST00000336890.9@LCK	ENST00000336890.9	protein_coding	32251239,32274325,32274737,32274993,32275321,32275569,32275914,32276337,32276607,32279671,32279841,32280079,32285514	32251371,32274434,32274818,32275083,32275419,32275672,32276063,32276489,32276786,32279747,32279994,32280210,32286165	Gene ID= ENSG00000182866.16 TPM= 2.12 Transcript Type= protein_coding
chr1	32292105	32333635	32292105	32333635	+	transcript2769.chr1.nic@HDAC1	transcript2769.chr1.nic	protein_coding	32292105,32302621,32316665,32324479,32326939,32327536,32330768,32331474,32331676,32332090,32332701,32333017	32292218,32302733,32316782,32324553,32327077,32330686,32330908,32331582,32331806,32332242,32332749,32333635	Gene ID= ENSG00000116478.11 TPM= 3.37 Transcript Type= NA
chr1	32292135	32333635	32292135	32333635	+	transcript2770.chr1.nic@HDAC1	transcript2770.chr1.nic	protein_coding	32292135,32302621,32316665,32324479,32326939,32330768,32331474,32331676,32332090,32332701,32333017	32292218,32302733,32316782,32324553,32330686,32330908,32331582,32331806,32332242,32332749,32333635	Gene ID= ENSG00000116478.11 TPM= 3.37 Transcript Type= NA
chr1	32292086	32333635	32292086	32333635	+	ENST00000373548.7@HDAC1	ENST00000373548.7	protein_coding	32292086,32302621,32316665,32324479,32326939,32327536,32329068,32330578,32330768,32331474,32331676,32332090,32332701,32333017	32292218,32302733,32316782,32324553,32327077,32327677,32329160,32330686,32330908,32331582,32331806,32332242,32332749,32333635	Gene ID= ENSG00000116478.11 TPM= 48.51 Transcript Type= protein_coding
chr1	32333832	32336379	32333832	32336379	-	ENST00000329421.7@MARCKSL1	ENST00000329421.7	protein_coding	32335947,32333832	32336379,32335097	Gene ID= ENSG00000175130.6 TPM= 62.67 Transcript Type= protein_coding
chr1	32354608	32358351	32354608	32358351	-	transcript2774.chr1.nnic@NA	transcript2774.chr1.nnic	NA	32354608	32358351	Gene ID= novel_gene_chr1_2775 TPM= 4.25 Transcript Type= NA
chr1	32361270	32362243	32361270	32362243	-	ENST00000432622.1@FAM229A	ENST00000432622.1	protein_coding	32361958,32361730,32361270	32362243,32361876,32361535	Gene ID= ENSG00000225828.1 TPM= 1.06 Transcript Type= protein_coding
chr1	32361271	32364223	32361271	32364223	-	ENST00000416512.1@FAM229A	ENST00000416512.1	protein_coding	32361730,32361271	32364223,32361535	Gene ID= ENSG00000225828.1 TPM= 2.12 Transcript Type= retained_intron
chr1	32365103	32394448	32365103	32394448	-	ENST00000455895.6@BSDC1	ENST00000455895.6	protein_coding	32394404,32394080,32386779,32383830,32381214,32378724,32378215,32377970,32376262,32368447,32365103	32394448,32394140,32386895,32383997,32381268,32378839,32378283,32378048,32376741,32368550,32366654	Gene ID= ENSG00000160058.18 TPM= 31.86 Transcript Type= protein_coding
chr1	32365113	32394428	32365113	32394428	-	ENST00000444377.5@BSDC1	ENST00000444377.5	protein_coding	32394404,32394080,32386779,32383830,32381214,32378724,32378215,32377970,32376262,32369230,32368447,32365113	32394428,32394140,32386895,32383997,32381268,32378839,32378283,32378048,32376741,32369338,32368550,32366654	Gene ID= ENSG00000160058.18 TPM= 7.44 Transcript Type= nonsense_mediated_decay
chr1	32539427	32605939	32539427	32605939	+	ENST00000373510.8@ZBTB8A	ENST00000373510.8	protein_coding	32539427,32553459,32592931,32595054,32600087	32539572,32553540,32593754,32595223,32605939	Gene ID= ENSG00000160062.14 TPM= 2.12 Transcript Type= protein_coding
chr1	32620820	32650584	32620820	32650584	-	ENST00000468695.5@ZBTB8OS	ENST00000468695.5	protein_coding	32650433,32634768,32633951,32633645,32631827,32627508,32620820	32650584,32634792,32634072,32633727,32631879,32627544,32621948	Gene ID= ENSG00000176261.15 TPM= 3.19 Transcript Type= protein_coding
chr1	32621841	32650550	32621841	32650550	-	ENST00000476493.5@ZBTB8OS	ENST00000476493.5	protein_coding	32650429,32634768,32633951,32633645,32631827,32627508,32621841	32650550,32634792,32634110,32633727,32631879,32627544,32621948	Gene ID= ENSG00000176261.15 TPM= 3.19 Transcript Type= nonsense_mediated_decay
chr1	32651148	32686211	32651148	32686211	+	ENST00000373493.9@RBBP4	ENST00000373493.9	protein_coding	32651148,32651914,32657427,32668225,32668739,32668972,32669231,32669486,32672450,32672642,32672791,32679640	32651322,32652061,32657572,32668398,32668854,32669132,32669357,32669563,32672526,32672699,32672901,32686211	Gene ID= ENSG00000162521.18 TPM= 31.33 Transcript Type= protein_coding
chr1	32651234	32680657	32651234	32680657	+	ENST00000373485.5@RBBP4	ENST00000373485.5	protein_coding	32651234,32651914,32657427,32668225,32668739,32668972,32669231,32669486,32672450,32672642,32672791,32680526	32651322,32652061,32657572,32668398,32668854,32669132,32669357,32669563,32672526,32672699,32672901,32680657	Gene ID= ENSG00000162521.18 TPM= 2.66 Transcript Type= protein_coding
chr1	32680360	32703119	32680360	32703119	-	ENST00000409190.7@SYNC	ENST00000409190.7	protein_coding	32702608,32694865,32684258,32684010,32680360	32703119,32696044,32684382,32684089,32681860	Gene ID= ENSG00000162520.14 TPM= 16.99 Transcript Type= protein_coding
chr1	32771400	32774970	32771400	32774970	+	transcript2841.chr1.nic@KIAA1522	transcript2841.chr1.nic	protein_coding	32771400,32772865	32772441,32774970	Gene ID= ENSG00000162522.10 TPM= 11.68 Transcript Type= NA
chr1	32775239	32818153	32775239	32818153	-	ENST00000373477.8@YARS	ENST00000373477.8	protein_coding	32817188,32810911,32810591,32806482,32797763,32791162,32786940,32786362,32782404,32781048,32780085,32779382,32775239	32818153,32811057,32810766,32806611,32797843,32791254,32787075,32786447,32782539,32781145,32780278,32779523,32776091	Gene ID= ENSG00000134684.10 TPM= 21.24 Transcript Type= protein_coding
chr1	32775239	32817380	32775239	32817380	-	transcript2835.chr1.nnic@YARS	transcript2835.chr1.nnic	protein_coding	32817188,32810591,32806482,32797763,32791162,32786940,32786362,32782404,32781048,32780085,32779382,32775239	32817380,32810766,32806611,32797843,32791254,32787075,32786447,32782539,32781145,32780278,32779523,32776091	Gene ID= ENSG00000134684.10 TPM= 7.44 Transcript Type= NA
chr1	32817442	32857854	32817442	32857854	+	ENST00000373476.5@S100PBP	ENST00000373476.5	protein_coding	32817442,32825313,32826098,32827993,32829964,32853079,32855924	32817599,32825429,32826930,32828081,32830067,32853166,32857854	Gene ID= ENSG00000116497.17 TPM= 1.06 Transcript Type= protein_coding
chr1	32817555	32858879	32817555	32858879	+	ENST00000373475.9@S100PBP	ENST00000373475.9	protein_coding	32817555,32825313,32826098,32827993,32829964,32853079,32855924	32817689,32825429,32826930,32828081,32830067,32853166,32858879	Gene ID= ENSG00000116497.17 TPM= 8.5 Transcript Type= protein_coding
chr1	32862268	32870953	32862268	32870953	-	transcript2845.chr1.nic@FNDC5	transcript2845.chr1.nic	protein_coding	32870653,32868882,32868190,32867753,32864664,32862268	32870953,32868997,32868388,32867842,32864797,32863776	Gene ID= ENSG00000160097.16 TPM= 6.37 Transcript Type= NA
chr1	32862268	32870949	32862268	32870949	-	transcript2847.chr1.nnic@FNDC5	transcript2847.chr1.nnic	protein_coding	32870653,32868882,32868190,32867753,32864664,32862268	32870949,32868997,32868388,32867842,32864797,32864483	Gene ID= ENSG00000160097.16 TPM= 6.37 Transcript Type= NA
chr1	32862268	32871138	32862268	32871138	-	transcript2852.chr1.nic@FNDC5	transcript2852.chr1.nic	protein_coding	32870653,32868882,32868190,32867753,32862268	32871138,32868997,32868388,32867842,32864797	Gene ID= ENSG00000160097.16 TPM= 12.75 Transcript Type= NA
chr1	32894595	32901427	32894595	32901427	-	transcript2858.chr1.nnic@TMEM54	transcript2858.chr1.nnic	protein_coding	32901223,32898126,32895910,32895555,32895305,32894595	32901427,32898319,32895969,32895743,32895439,32894933	Gene ID= ENSG00000121900.18 TPM= 3.19 Transcript Type= NA
chr1	32894595	32901358	32894595	32901358	-	ENST00000373463.7@TMEM54	ENST00000373463.7	protein_coding	32901223,32898126,32895910,32895555,32895305,32894595	32901358,32898319,32895969,32895743,32895439,32894879	Gene ID= ENSG00000121900.18 TPM= 30.8 Transcript Type= protein_coding
chr1	32929035	32932763	32929035	32932763	-	transcript2861.chr1.nnic@NA	transcript2861.chr1.nnic	NA	32929035	32932763	Gene ID= novel_gene_chr1_2862 TPM= 2.12 Transcript Type= NA
chr1	32973480	32975342	32973480	32975342	-	transcript2867.chr1.nnic@NA	transcript2867.chr1.nnic	NA	32973480	32975342	Gene ID= novel_gene_chr1_2868 TPM= 2.12 Transcript Type= NA
chr1	32996378	32999940	32996378	32999940	-	transcript2869.chr1.nnic@NA	transcript2869.chr1.nnic	NA	32996378	32999940	Gene ID= novel_gene_chr1_2870 TPM= 2.12 Transcript Type= NA
chr1	33013044	33036992	33013044	33036992	-	ENST00000354858.10@AK2	ENST00000354858.10	protein_coding	33036736,33024442,33021593,33021367,33014522,33013044	33036992,33024567,33021703,33021461,33014594,33013402	Gene ID= ENSG00000004455.16 TPM= 99.84 Transcript Type= protein_coding
chr1	33081155	33120529	33081155	33120529	+	transcript2885.chr1.nic@AZIN2	transcript2885.chr1.nic	protein_coding	33081155,33081388,33082178,33083954,33092050,33093282,33094548,33096707,33098067,33117902,33120044	33081294,33081508,33082354,33084127,33092222,33093416,33094713,33096869,33098179,33118116,33120529	Gene ID= ENSG00000142920.16 TPM= 2.66 Transcript Type= NA
chr1	33081167	33120529	33081167	33120529	+	ENST00000373443.7@AZIN2	ENST00000373443.7	protein_coding	33081167,33081391,33082178,33083954,33092050,33093282,33094548,33096707,33098067,33117902,33120044	33081294,33081508,33082354,33084127,33092222,33093416,33094713,33096869,33098179,33118116,33120529	Gene ID= ENSG00000142920.16 TPM= 2.66 Transcript Type= protein_coding
chr1	33256278	33300719	33256278	33300719	+	transcript2892.chr1.nic@ZNF362	transcript2892.chr1.nic	protein_coding	33256278,33276100,33276348,33280124,33281587,33294937,33295147,33298930	33256654,33276163,33276594,33280457,33281811,33295015,33295305,33300719	Gene ID= ENSG00000160094.14 TPM= 46.74 Transcript Type= NA
chr1	33286035	33288760	33286035	33288760	+	transcript2893.chr1.nnic@NA	transcript2893.chr1.nnic	NA	33286035	33288760	Gene ID= novel_gene_chr1_2894 TPM= 3.19 Transcript Type= NA
chr1	33323626	33430774	33323626	33430774	-	transcript2895.chr1.nnic@PHC2	transcript2895.chr1.nnic	protein_coding	33430181,33375366,33372289,33371017,33370421,33368536,33367116,33354838,33354401,33334090,33332275,33331348,33330071,33328870,33323626	33430774,33375593,33372447,33371094,33370585,33368622,33367428,33355253,33354566,33334292,33332404,33331462,33330212,33329146,33325019	Gene ID= ENSG00000134686.18 TPM= 7.17 Transcript Type= NA
chr1	33323626	33349908	33323626	33349908	-	transcript2901.chr1.nnic@PHC2	transcript2901.chr1.nnic	protein_coding	33349597,33335166,33334090,33332275,33331348,33330071,33328870,33323626	33349908,33335359,33334292,33332404,33331462,33330212,33329146,33325019	Gene ID= ENSG00000134686.18 TPM= 28.15 Transcript Type= NA
chr1	33323626	33349908	33323626	33349908	-	transcript2905.chr1.nnic@PHC2	transcript2905.chr1.nnic	protein_coding	33349597,33335166,33334185,33332275,33331348,33330071,33328870,33323626	33349908,33335359,33334292,33332404,33331462,33330212,33329146,33325019	Gene ID= ENSG00000134686.18 TPM= 17.26 Transcript Type= NA
chr1	33323626	33349946	33323626	33349946	-	transcript2909.chr1.nic@PHC2	transcript2909.chr1.nic	protein_coding	33349597,33334185,33332275,33331348,33330071,33328870,33323626	33349946,33334292,33332404,33331462,33330212,33329146,33325019	Gene ID= ENSG00000134686.18 TPM= 32.13 Transcript Type= NA
chr1	33323626	33349885	33323626	33349885	-	ENST00000373418.7@PHC2	ENST00000373418.7	protein_coding	33349597,33334090,33332275,33331348,33330071,33328870,33323626	33349885,33334292,33332404,33331462,33330212,33329146,33325019	Gene ID= ENSG00000134686.18 TPM= 67.45 Transcript Type= protein_coding
chr1	33323626	33375593	33323626	33375593	-	ENST00000257118.5@PHC2	ENST00000257118.5	protein_coding	33375366,33372289,33371017,33370421,33368536,33367116,33354841,33354401,33334090,33332275,33331348,33330071,33328870,33323626	33375593,33372447,33371094,33370585,33368622,33367428,33355253,33354566,33334292,33332404,33331462,33330212,33329146,33325019	Gene ID= ENSG00000134686.18 TPM= 5.05 Transcript Type= protein_coding
chr1	33340733	33343489	33340733	33343489	+	transcript2912.chr1.nnic@NA	transcript2912.chr1.nnic	NA	33340733	33343489	Gene ID= novel_gene_chr1_2913 TPM= 62.67 Transcript Type= NA
chr1	33472645	33496507	33472645	33496507	+	ENST00000361328.7@ZSCAN20	ENST00000361328.7	protein_coding	33472645,33479179,33488465,33489115,33489518,33491025,33493187,33494218	33472687,33479705,33488651,33489191,33489602,33491702,33493615,33496507	Gene ID= ENSG00000121903.14 TPM= 1.06 Transcript Type= protein_coding
chr1	33483255	33486248	33483255	33486248	-	transcript2918.chr1.nnic@NA	transcript2918.chr1.nnic	NA	33483255	33486248	Gene ID= novel_gene_chr1_2919 TPM= 2.12 Transcript Type= NA
chr1	33499947	33501638	33499947	33501638	+	transcript2920.chr1.nnic@NA	transcript2920.chr1.nnic	NA	33499947	33501638	Gene ID= novel_gene_chr1_2921 TPM= 2.12 Transcript Type= NA
chr1	34792998	34795747	34792998	34795747	+	ENST00000342280.4@GJA4	ENST00000342280.4	protein_coding	34792998,34794197	34793068,34795747	Gene ID= ENSG00000187513.8 TPM= 18.06 Transcript Type= protein_coding
chr1	34852669	34859816	34852669	34859816	-	ENST00000521580.2@SMIM12	ENST00000521580.2	protein_coding	34859677,34852669	34859816,34855982	Gene ID= ENSG00000163866.8 TPM= 8.5 Transcript Type= protein_coding
chr1	34981535	34985353	34981535	34985353	-	ENST00000373337.3@TMEM35B	ENST00000373337.3	protein_coding	34985198,34983767,34981535	34985353,34983947,34982119	Gene ID= ENSG00000243749.1 TPM= 13.81 Transcript Type= protein_coding
chr1	34988173	35031735	34988173	35031735	-	transcript2935.chr1.nic@AC114490.2	transcript2935.chr1.nic	protein_coding	35031631,35030547,35020383,35019353,35014988,35014697,35012431,35011890,35010758,35010447,35008752,35006951,35005132,35003968,34992234,34988173	35031735,35030713,35020467,35019602,35015162,35014888,35012581,35012005,35011036,35010597,35008924,35007098,35005272,35004005,34992387,34988935	Gene ID= ENSG00000271741.1 TPM= 3.19 Transcript Type= NA
chr1	35017250	35031735	35017250	35031735	-	transcript2941.chr1.nic@AC114490.2	transcript2941.chr1.nic	protein_coding	35031631,35030547,35020383,35017250	35031735,35030713,35020467,35019602	Gene ID= ENSG00000271741.1 TPM= 6.37 Transcript Type= NA
chr1	34986980	35031968	34986980	35031968	-	ENST00000357182.8@ZMYM6	ENST00000357182.8	protein_coding	35031815,35030547,35020383,35019353,35014988,35014697,35012431,35011890,35010758,35010447,35008752,35006951,35005132,35003968,34992234,34986980	35031968,35030713,35020467,35019602,35015162,35014888,35012581,35012005,35011036,35010597,35008924,35007098,35005272,35004005,34992387,34988935	Gene ID= ENSG00000163867.16 TPM= 3.19 Transcript Type= protein_coding
chr1	35017244	35031905	35017244	35031905	-	ENST00000317538.9@ZMYM6	ENST00000317538.9	protein_coding	35031815,35030547,35020383,35017244	35031905,35030713,35020467,35019602	Gene ID= ENSG00000163867.16 TPM= 3.19 Transcript Type= protein_coding
chr1	35079381	35116423	35079381	35116423	+	transcript2950.chr1.nic@ZMYM1	transcript2950.chr1.nic	protein_coding	35079381,35093320,35093914,35095819,35097317,35104295,35104557,35110294,35111772,35112087,35112977	35079442,35093441,35094083,35095891,35097566,35104469,35104769,35110447,35111912,35112130,35116423	Gene ID= ENSG00000197056.9 TPM= 2.12 Transcript Type= NA
chr1	35176380	35193146	35176380	35193146	-	transcript2955.chr1.nic@SFPQ	transcript2955.chr1.nic	protein_coding	35192222,35191341,35190694,35190498,35189186,35189003,35187973,35187203,35187001,35177989,35177319,35176380	35193146,35191529,35190995,35190593,35189382,35189087,35188090,35187251,35187122,35178036,35177399,35176471	Gene ID= ENSG00000116560.10 TPM= 9.13 Transcript Type= NA
chr1	35182932	35193148	35182932	35193148	-	ENST00000357214.5@SFPQ	ENST00000357214.5	protein_coding	35192222,35191341,35190694,35190498,35189186,35189003,35187973,35187203,35187001,35182932	35193148,35191529,35190995,35190593,35189382,35189087,35188090,35187251,35187122,35184593	Gene ID= ENSG00000116560.10 TPM= 83.49 Transcript Type= protein_coding
chr1	35268967	35421944	35268967	35421944	+	ENST00000314607.10@ZMYM4	ENST00000314607.10	protein_coding	35268967,35325360,35358925,35361194,35361619,35370029,35370372,35381259,35381546,35385442,35386074,35387003,35387454,35388910,35389948,35392212,35392647,35393595,35396552,35397377,35398413,35398864,35399482,35405023,35405373,35408008,35413972,35415466,35418443,35419470	35269085,35325405,35359446,35361255,35361789,35370113,35370627,35381433,35381758,35385592,35386189,35387278,35387604,35389082,35390098,35392352,35392684,35393739,35396670,35397545,35398466,35399043,35399576,35405194,35405468,35408159,35414083,35415714,35418572,35421944	Gene ID= ENSG00000146463.11 TPM= 4.25 Transcript Type= protein_coding
chr1	35332405	35333633	35332405	35333633	-	transcript2983.chr1.nnic@NA	transcript2983.chr1.nnic	NA	35332405	35333633	Gene ID= novel_gene_chr1_2984 TPM= 6.37 Transcript Type= NA
chr1	35434105	35557424	35434105	35557424	-	transcript2986.chr1.nnic@KIAA0319L	transcript2986.chr1.nnic	protein_coding	35557207,35554350,35506612,35478966,35474805,35470863,35466608,35462621,35460305,35456013,35454362,35453557,35451628,35450358,35449867,35448723,35448173,35444161,35442906,35442246,35441047,35434105	35557424,35554519,35507135,35479212,35474906,35470960,35466695,35462713,35460437,35456241,35454485,35453689,35451776,35450509,35450005,35448818,35448332,35444303,35443028,35442336,35441138,35435081	Gene ID= ENSG00000142687.17 TPM= 3.19 Transcript Type= NA
chr1	35434252	35557424	35434252	35557424	-	transcript2996.chr1.nic@KIAA0319L	transcript2996.chr1.nic	protein_coding	35557207,35554350,35478966,35474805,35470863,35466608,35462621,35460305,35456013,35454362,35453557,35451628,35450358,35449867,35448173,35444161,35442906,35442246,35441047,35434252	35557424,35554519,35479212,35474906,35470960,35466695,35462713,35460437,35456241,35454485,35453689,35451776,35450509,35450005,35448332,35444303,35443028,35442336,35441138,35435081	Gene ID= ENSG00000142687.17 TPM= 4.25 Transcript Type= NA
chr1	35433490	35557413	35433490	35557413	-	ENST00000325722.7@KIAA0319L	ENST00000325722.7	protein_coding	35557207,35554350,35506612,35478966,35474805,35470863,35466608,35462621,35460305,35456013,35454362,35453557,35451628,35450358,35449867,35448173,35444161,35442906,35442246,35441047,35433490	35557413,35554519,35507135,35479212,35474906,35470960,35466695,35462713,35460437,35456241,35454485,35453689,35451776,35450509,35450005,35448332,35444303,35443028,35442336,35441138,35435081	Gene ID= ENSG00000142687.17 TPM= 28.68 Transcript Type= protein_coding
chr1	35529175	35532253	35529175	35532253	+	transcript3022.chr1.nnic@NA	transcript3022.chr1.nnic	NA	35529175	35532253	Gene ID= novel_gene_chr1_3023 TPM= 4.25 Transcript Type= NA
chr1	35532136	35534881	35532136	35534881	+	transcript3024.chr1.nnic@NA	transcript3024.chr1.nnic	NA	35532136	35534881	Gene ID= novel_gene_chr1_3025 TPM= 8.5 Transcript Type= NA
chr1	35557794	35566773	35557794	35566773	+	transcript3007.chr1.nic@NCDN	transcript3007.chr1.nic	protein_coding	35557794,35559107,35560326,35562392,35563202,35563767,35565227	35558685,35559247,35561294,35562633,35563426,35563909,35566773	Gene ID= ENSG00000020129.15 TPM= 20.55 Transcript Type= NA
chr1	35557473	35566772	35557473	35566772	+	ENST00000373253.7@NCDN	ENST00000373253.7	protein_coding	35557473,35559107,35560326,35562392,35563202,35563767,35565227	35557883,35559247,35561294,35562633,35563426,35563909,35566772	Gene ID= ENSG00000020129.15 TPM= 12.32 Transcript Type= protein_coding
chr1	35557792	35566779	35557792	35566779	+	ENST00000356090.8@NCDN	ENST00000356090.8	protein_coding	35557792,35558156,35559107,35560326,35562392,35563202,35563767,35565227	35557883,35558223,35559247,35561294,35562633,35563426,35563909,35566779	Gene ID= ENSG00000020129.15 TPM= 46.04 Transcript Type= protein_coding
chr1	35557808	35566773	35557808	35566773	+	ENST00000373243.6@NCDN	ENST00000373243.6	protein_coding	35557808,35559107,35560326,35562392,35563202,35563767,35565227	35558223,35559247,35561294,35562633,35563426,35563909,35566773	Gene ID= ENSG00000020129.15 TPM= 33.3 Transcript Type= protein_coding
chr1	35601584	35641844	35601584	35641844	-	ENST00000373237.3@PSMB2	ENST00000373237.3	protein_coding	35641342,35636310,35631274,35609246,35605233,35601584	35641844,35636432,35631344,35609408,35605282,35603374	Gene ID= ENSG00000126067.11 TPM= 12.75 Transcript Type= protein_coding
chr1	35713875	35719472	35713875	35719472	-	ENST00000270815.4@C1orf216	ENST00000270815.4	protein_coding	35718707,35713875	35719472,35716326	Gene ID= ENSG00000142686.7 TPM= 45.67 Transcript Type= protein_coding
chr1	35808172	35857890	35808172	35857890	+	ENST00000373210.3@AGO4	ENST00000373210.3	protein_coding	35808172,35816882,35822862,35825313,35825679,35825926,35826748,35831427,35831812,35832057,35832437,35833990,35835834,35841165,35841616,35850157,35850854,35853497	35808435,35817047,35822982,35825494,35825815,35826060,35826835,35831574,35831931,35832185,35832570,35834174,35835993,35841480,35841750,35850258,35851053,35857890	Gene ID= ENSG00000134698.10 TPM= 9.56 Transcript Type= protein_coding
chr1	35837387	35840454	35837387	35840454	-	transcript3033.chr1.nnic@NA	transcript3033.chr1.nnic	NA	35837387	35840454	Gene ID= novel_gene_chr1_3034 TPM= 2.12 Transcript Type= NA
chr1	35921001	35924296	35921001	35924296	+	transcript3035.chr1.nnic@NA	transcript3035.chr1.nnic	NA	35921001	35924296	Gene ID= novel_gene_chr1_3036 TPM= 26.55 Transcript Type= NA
chr1	35931078	36072500	35931078	36072500	+	ENST00000373191.8@AGO3	ENST00000373191.8	protein_coding	35931078,35945692,35966955,35972024,35973375,36004341,36008690,36008897,36009475,36013630,36013915,36027114,36034174,36036177,36039790,36040307,36043447,36054946,36055637	35931445,35945863,35967075,35972232,35973511,36004475,36008777,36009044,36009594,36013752,36014048,36027298,36034333,36036267,36039984,36040441,36043548,36055145,36072500	Gene ID= ENSG00000126070.19 TPM= 5.31 Transcript Type= protein_coding
chr1	36088875	36093932	36088875	36093932	+	ENST00000373178.4@ADPRHL2	ENST00000373178.4	protein_coding	36088875,36091244,36091618,36091910,36092422,36093097	36089115,36091340,36091825,36092094,36092522,36093932	Gene ID= ENSG00000116863.10 TPM= 91.35 Transcript Type= protein_coding
chr1	36136581	36149504	36136581	36149504	-	transcript3073.chr1.nic@TRAPPC3	transcript3073.chr1.nic	protein_coding	36149337,36140069,36139720,36136581	36149504,36140166,36139819,36137978	Gene ID= ENSG00000054116.11 TPM= 4.25 Transcript Type= NA
chr1	36136572	36149469	36136572	36149469	-	ENST00000373166.7@TRAPPC3	ENST00000373166.7	protein_coding	36149337,36140069,36139720,36137796,36136572	36149469,36140166,36139819,36137978,36137322	Gene ID= ENSG00000054116.11 TPM= 8.5 Transcript Type= protein_coding
chr1	36156163	36180849	36156163	36180849	+	transcript3058.chr1.nic@MAP7D1	transcript3058.chr1.nic	protein_coding	36156163,36170971,36171513,36172464,36173364,36174898,36176199,36176697,36177873,36178446,36178685,36178921,36179262,36179515,36179666,36179874,36180248	36156463,36171315,36171581,36172627,36173478,36175008,36176581,36176842,36178201,36178596,36178823,36179025,36179315,36179557,36179756,36180067,36180849	Gene ID= ENSG00000116871.15 TPM= 30.81 Transcript Type= NA
chr1	36156167	36180849	36156167	36180849	+	transcript3059.chr1.nic@MAP7D1	transcript3059.chr1.nic	protein_coding	36156167,36170971,36171513,36172464,36173364,36176199,36176418,36176697,36177873,36178419,36178685,36178921,36179262,36179515,36179666,36179874,36180248	36156463,36171315,36171581,36172627,36173478,36176321,36176581,36176842,36178201,36178596,36178823,36179025,36179315,36179557,36179756,36180067,36180849	Gene ID= ENSG00000116871.15 TPM= 54.62 Transcript Type= NA
chr1	36155965	36180849	36155965	36180849	+	ENST00000316156.8@MAP7D1	ENST00000316156.8	protein_coding	36155965,36170971,36171513,36172464,36173364,36176199,36176697,36177873,36178419,36178685,36178921,36179262,36179515,36179666,36179874,36180248	36156463,36171315,36171581,36172627,36173478,36176581,36176842,36178201,36178596,36178823,36179025,36179315,36179557,36179756,36180067,36180849	Gene ID= ENSG00000116871.15 TPM= 79.05 Transcript Type= protein_coding
chr1	36156202	36180840	36156202	36180840	+	ENST00000373151.6@MAP7D1	ENST00000373151.6	protein_coding	36156202,36170971,36171513,36172464,36173364,36174898,36176199,36176697,36177873,36178419,36178685,36178921,36179262,36179512,36179666,36179874,36180248	36156463,36171315,36171581,36172627,36173478,36175008,36176581,36176842,36178201,36178596,36178823,36179025,36179315,36179557,36179756,36180067,36180840	Gene ID= ENSG00000116871.15 TPM= 113.77 Transcript Type= protein_coding
chr1	36156198	36180849	36156198	36180849	+	ENST00000373150.8@MAP7D1	ENST00000373150.8	protein_coding	36156198,36170971,36171513,36172464,36173364,36174898,36176199,36176418,36176697,36177873,36178419,36178685,36178921,36179262,36179515,36179666,36179874,36180248	36156463,36171315,36171581,36172627,36173478,36175008,36176321,36176581,36176842,36178201,36178596,36178823,36179025,36179315,36179557,36179756,36180067,36180849	Gene ID= ENSG00000116871.15 TPM= 116.06 Transcript Type= protein_coding
chr1	36224388	36289133	36224388	36289133	+	transcript3084.chr1.nic@THRAP3	transcript3084.chr1.nic	protein_coding	36224388,36224971,36259382,36282533,36286368,36289060	36224505,36225102,36259484,36282700,36287270,36289133	Gene ID= ENSG00000054118.13 TPM= 3.54 Transcript Type= NA
chr1	36224403	36289120	36224403	36289120	+	transcript3086.chr1.nnic@THRAP3	transcript3086.chr1.nnic	protein_coding	36224403,36259382,36282533,36286368,36287477,36289060	36224505,36259484,36282700,36287270,36287871,36289120	Gene ID= ENSG00000054118.13 TPM= 6.37 Transcript Type= NA
chr1	36224403	36289133	36224403	36289133	+	transcript3090.chr1.nic@THRAP3	transcript3090.chr1.nic	protein_coding	36224403,36259382,36282533,36286368,36289060	36224505,36259484,36282700,36287270,36289133	Gene ID= ENSG00000054118.13 TPM= 61.96 Transcript Type= NA
chr1	36224403	36289133	36224403	36289133	+	transcript3092.chr1.nic@THRAP3	transcript3092.chr1.nic	protein_coding	36224403,36259382,36282533,36286368	36224505,36259484,36282700,36289133	Gene ID= ENSG00000054118.13 TPM= 2.12 Transcript Type= NA
chr1	36224432	36289133	36224432	36289133	+	transcript3094.chr1.nnic@THRAP3	transcript3094.chr1.nnic	protein_coding	36224432,36282533,36286368,36289060	36224505,36282700,36287270,36289133	Gene ID= ENSG00000054118.13 TPM= 3.54 Transcript Type= NA
chr1	36295962	36301313	36295962	36301313	+	transcript3096.chr1.nic@THRAP3	transcript3096.chr1.nic	protein_coding	36295962,36300886	36296770,36301313	Gene ID= ENSG00000054118.13 TPM= 2.12 Transcript Type= NA
chr1	36224416	36305357	36224416	36305357	+	ENST00000354618.9@THRAP3	ENST00000354618.9	protein_coding	36224416,36259382,36282533,36286368,36289060,36291374,36292598,36293851,36296583,36300886,36301553,36303796	36224505,36259484,36282700,36287270,36289764,36291546,36292709,36293935,36296770,36301084,36301696,36305357	Gene ID= ENSG00000054118.13 TPM= 139.14 Transcript Type= protein_coding
chr1	36293030	36293915	36293030	36293915	-	transcript3097.chr1.nnic@NA	transcript3097.chr1.nnic	NA	36293030	36293915	Gene ID= novel_gene_chr1_3098 TPM= 8.5 Transcript Type= NA
chr1	36322030	36323613	36322030	36323613	-	transcript3100.chr1.nnic@EVA1B	transcript3100.chr1.nnic	protein_coding	36323459,36322030	36323613,36322725	Gene ID= ENSG00000142694.6 TPM= 14.87 Transcript Type= NA
chr1	36339624	36385915	36339624	36385915	-	transcript3101.chr1.nic@STK40	transcript3101.chr1.nic	protein_coding	36385723,36367852,36361221,36358737,36358239,36355206,36354364,36348700,36344120,36343860,36343364,36339624	36385915,36368084,36361340,36358822,36358382,36355433,36354416,36348815,36344264,36343979,36343448,36341973	Gene ID= ENSG00000196182.10 TPM= 27.53 Transcript Type= NA
chr1	36339624	36385896	36339624	36385896	-	ENST00000373132.3@STK40	ENST00000373132.3	protein_coding	36385723,36361221,36358737,36358239,36355206,36354364,36348700,36344120,36343860,36343364,36339624	36385896,36361340,36358822,36358382,36355433,36354416,36348815,36344264,36343979,36343448,36341973	Gene ID= ENSG00000196182.10 TPM= 57.27 Transcript Type= protein_coding
chr1	36339624	36385884	36339624	36385884	-	ENST00000373129.7@STK40	ENST00000373129.7	protein_coding	36385723,36367848,36361221,36358737,36358239,36355206,36354364,36348700,36344120,36343860,36343364,36339624	36385884,36368084,36361340,36358822,36358382,36355433,36354416,36348815,36344264,36343979,36343448,36341973	Gene ID= ENSG00000196182.10 TPM= 27.53 Transcript Type= protein_coding
chr1	36393430	36397892	36393430	36397892	-	ENST00000315732.2@LSM10	ENST00000315732.2	protein_coding	36397767,36393430	36397892,36394153	Gene ID= ENSG00000181817.5 TPM= 42.49 Transcript Type= protein_coding
chr1	36417906	36450451	36417906	36450451	-	ENST00000235532.9@OSCP1	ENST00000235532.9	protein_coding	36450258,36438756,36432422,36431802,36423363,36422768,36422150,36420476,36418991,36417906	36450451,36438910,36432589,36431882,36423466,36422896,36422219,36420615,36419054,36418255	Gene ID= ENSG00000116885.18 TPM= 7.44 Transcript Type= protein_coding
chr1	36455718	36464437	36455718	36464437	-	ENST00000373116.5@MRPS15	ENST00000373116.5	protein_coding	36464146,36463806,36462088,36461264,36460692,36457923,36456187,36455718	36464437,36463850,36462163,36461312,36460776,36457981,36456378,36455925	Gene ID= ENSG00000116898.11 TPM= 88.16 Transcript Type= protein_coding
chr1	37454879	37474411	37454879	37474411	-	ENST00000424989.1@LINC01137	ENST00000424989.1	antisense_RNA	37474144,37456367,37454879	37474411,37456459,37455912	Gene ID= ENSG00000233621.1 TPM= 9.56 Transcript Type= antisense_RNA
chr1	37474552	37484379	37474552	37484379	+	ENST00000373087.6@ZC3H12A	ENST00000373087.6	protein_coding	37474552,37475459,37480290,37481601,37482434,37482737	37474629,37475939,37480429,37481835,37482540,37484379	Gene ID= ENSG00000163874.10 TPM= 3.19 Transcript Type= protein_coding
chr1	37492575	37514763	37492575	37514763	-	ENST00000373075.6@MEAF6	ENST00000373075.6	protein_coding	37514657,37513423,37509455,37509278,37501804,37496707,37495885,37492575	37514763,37513538,37509542,37509323,37501996,37496736,37495918,37494107	Gene ID= ENSG00000163875.15 TPM= 8.5 Transcript Type= protein_coding
chr1	37493178	37514774	37493178	37514774	-	ENST00000296214.9@MEAF6	ENST00000296214.9	protein_coding	37514657,37513423,37509455,37509278,37501804,37495885,37493178	37514774,37513538,37509542,37509323,37501996,37495918,37494107	Gene ID= ENSG00000163875.15 TPM= 16.99 Transcript Type= protein_coding
chr1	37493335	37514756	37493335	37514756	-	ENST00000475828.5@MEAF6	ENST00000475828.5	protein_coding	37514657,37513423,37509455,37509278,37501804,37496547,37495885,37493335	37514756,37513538,37509542,37509323,37501996,37496604,37495918,37494107	Gene ID= ENSG00000163875.15 TPM= 7.44 Transcript Type= processed_transcript
chr1	37534449	37554344	37534449	37554344	-	ENST00000296215.7@SNIP1	ENST00000296215.7	protein_coding	37554006,37552645,37540157,37534449	37554344,37552747,37540755,37538012	Gene ID= ENSG00000163877.10 TPM= 2.12 Transcript Type= protein_coding
chr1	37566816	37595921	37566816	37595921	-	ENST00000373062.7@GNL2	ENST00000373062.7	protein_coding	37595759,37593762,37592712,37590706,37587311,37583867,37582778,37582223,37576428,37575595,37574665,37574343,37568851,37568275,37567673,37566816	37595921,37593846,37592806,37590845,37587495,37583933,37582936,37582336,37576556,37575699,37574823,37574456,37569302,37568357,37567764,37567007	Gene ID= ENSG00000134697.12 TPM= 20.18 Transcript Type= protein_coding
chr1	37681570	37690528	37681570	37690528	-	transcript3149.chr1.nic@C1orf109	transcript3149.chr1.nic	protein_coding	37690002,37689606,37686273,37683319,37681570	37690528,37689883,37686452,37683437,37683160	Gene ID= ENSG00000116922.14 TPM= 2.66 Transcript Type= NA
chr1	37681570	37690565	37681570	37690565	-	transcript3150.chr1.nic@C1orf109	transcript3150.chr1.nic	protein_coding	37690216,37689606,37686273,37683319,37681570	37690565,37689883,37686452,37683437,37683160	Gene ID= ENSG00000116922.14 TPM= 7.97 Transcript Type= NA
chr1	37681571	37684192	37681571	37684192	-	ENST00000609516.1@C1orf109	ENST00000609516.1	protein_coding	37681571	37684192	Gene ID= ENSG00000116922.14 TPM= 1.59 Transcript Type= processed_transcript
chr1	37681570	37690520	37681570	37690520	-	ENST00000358011.8@C1orf109	ENST00000358011.8	protein_coding	37690334,37689606,37686273,37683319,37681570	37690520,37689883,37686452,37683437,37683160	Gene ID= ENSG00000116922.14 TPM= 2.66 Transcript Type= protein_coding
chr1	37793802	37801133	37793802	37801133	+	ENST00000373045.10@MANEAL	ENST00000373045.10	protein_coding	37793802,37795737,37796744,37799567	37794732,37795846,37796820,37801133	Gene ID= ENSG00000185090.14 TPM= 3.19 Transcript Type= protein_coding
chr1	37802944	37808185	37802944	37808185	-	ENST00000373044.2@YRDC	ENST00000373044.2	protein_coding	37807792,37807101,37806857,37804302,37802944	37808185,37807215,37806976,37804444,37803997	Gene ID= ENSG00000196449.3 TPM= 29.74 Transcript Type= protein_coding
chr1	37808146	37809454	37808146	37809454	+	ENST00000373042.4@C1orf122	ENST00000373042.4	protein_coding	37808146,37808531,37808978	37808439,37808732,37809454	Gene ID= ENSG00000197982.13 TPM= 92.41 Transcript Type= protein_coding
chr1	37806979	37809452	37806979	37809452	+	ENST00000373043.1@C1orf122	ENST00000373043.1	protein_coding	37806979,37808978	37808732,37809452	Gene ID= ENSG00000197982.13 TPM= 15.93 Transcript Type= protein_coding
chr1	37807747	37809449	37807747	37809449	+	ENST00000468084.1@C1orf122	ENST00000468084.1	protein_coding	37807747,37808531,37808978	37808306,37808732,37809449	Gene ID= ENSG00000197982.13 TPM= 30.8 Transcript Type= protein_coding
chr1	37809567	37859620	37809567	37859620	-	ENST00000373036.4@MTF1	ENST00000373036.4	protein_coding	37859531,37857251,37839920,37838625,37835671,37835079,37832245,37823710,37822121,37817419,37809567	37859620,37857709,37840158,37838756,37835744,37835215,37832322,37823812,37822716,37817482,37815566	Gene ID= ENSG00000188786.9 TPM= 1.06 Transcript Type= protein_coding
chr1	37861217	37861751	37861217	37861751	+	transcript3174.chr1.nnic@NA	transcript3174.chr1.nnic	NA	37861217	37861751	Gene ID= novel_gene_chr1_3175 TPM= 6.37 Transcript Type= NA
chr1	37869674	37871173	37869674	37871173	+	transcript3176.chr1.nnic@NA	transcript3176.chr1.nnic	NA	37869674	37871173	Gene ID= novel_gene_chr1_3177 TPM= 6.37 Transcript Type= NA
chr1	37956975	37990921	37956975	37990921	-	ENST00000373019.4@SF3A3	ENST00000373019.4	protein_coding	37989870,37989548,37987784,37987573,37984707,37984169,37981729,37980586,37979465,37978988,37978720,37976884,37969571,37969354,37968044,37960120,37956975	37990921,37989595,37987836,37987678,37984779,37984260,37981811,37980724,37979533,37979055,37978827,37976953,37969735,37969464,37968134,37960175,37958263	Gene ID= ENSG00000183431.11 TPM= 15.93 Transcript Type= protein_coding
chr1	37996770	38005505	37996770	38005505	-	ENST00000373016.3@FHL3	ENST00000373016.3	protein_coding	38005357,37999257,37998974,37997963,37997684,37996770	38005505,37999432,37999148,37998132,37997870,37997559	Gene ID= ENSG00000183386.9 TPM= 5.31 Transcript Type= protein_coding
chr1	38012742	38024824	38012742	38024824	+	ENST00000373014.4@UTP11	ENST00000373014.4	protein_coding	38012742,38016359,38017668,38018464,38019059,38019253,38022699,38023545	38012865,38016420,38017770,38018577,38019152,38019383,38022809,38024824	Gene ID= ENSG00000183520.11 TPM= 15.93 Transcript Type= protein_coding
chr1	38044611	38046794	38044611	38046794	-	ENST00000373012.4@POU3F1	ENST00000373012.4	protein_coding	38044611	38046794	Gene ID= ENSG00000185668.7 TPM= 1.06 Transcript Type= protein_coding
chr1	38838198	38859823	38838198	38859823	-	ENST00000373001.3@RRAGC	ENST00000373001.3	protein_coding	38859410,38856879,38855708,38852374,38851615,38845939,38838198	38859823,38857082,38855907,38852488,38851757,38846087,38839704	Gene ID= ENSG00000116954.7 TPM= 24.43 Transcript Type= protein_coding
chr1	38859898	38919513	38859898	38919513	+	transcript3204.chr1.nnic@AL139260.1	transcript3204.chr1.nnic	antisense_RNA	38859898,38913540,38915153,38919174	38860239,38913628,38915267,38919513	Gene ID= ENSG00000228436.2 TPM= 2.12 Transcript Type= NA
chr1	38859898	38919396	38859898	38919396	+	transcript3209.chr1.nnic@AL139260.1	transcript3209.chr1.nnic	antisense_RNA	38859898,38913540,38919174	38860239,38913628,38919396	Gene ID= ENSG00000228436.2 TPM= 3.19 Transcript Type= NA
chr1	38862964	38874105	38862964	38874105	-	ENST00000397572.4@MYCBP	ENST00000397572.4	protein_coding	38873291,38873018,38867562,38866880,38862964	38874105,38873090,38867610,38867009,38864714	Gene ID= ENSG00000214114.8 TPM= 10.62 Transcript Type= protein_coding
chr1	38991223	39006059	38991223	39006059	+	ENST00000432648.7@AKIRIN1	ENST00000432648.7	protein_coding	38991223,38998171,39000972,39003347,39004045	38991600,38998311,39001106,39003418,39006059	Gene ID= ENSG00000174574.15 TPM= 82.32 Transcript Type= protein_coding
chr1	39026318	39034636	39026318	39034636	+	ENST00000372969.7@NDUFS5	ENST00000372969.7	protein_coding	39026318,39028723,39034392	39026402,39028940,39034636	Gene ID= ENSG00000168653.10 TPM= 377.07 Transcript Type= protein_coding
chr1	39204246	39487177	39204246	39487177	+	ENST00000564288.5@MACF1	ENST00000564288.5	protein_coding	39204246,39231182,39250014,39251846,39254298,39257936,39282208,39283189,39283409,39284066,39284333,39285083,39285297,39285604,39287286,39291910,39292766,39293458,39295046,39295787,39297620,39300210,39302924,39309570,39310245,39310831,39315513,39316391,39317214,39318453,39319664,39322608,39322910,39324193,39324646,39327218,39331203,39337182,39340502,39340804,39346977,39349478,39350785,39353007,39357375,39358697,39359141,39360793,39361360,39368148,39370030,39372479,39378461,39379203,39380244,39381953,39385434,39387187,39422374,39422730,39424028,39427455,39427961,39429242,39429827,39430702,39432535,39433048,39434414,39435558,39437777,39439274,39441003,39441224,39441952,39442147,39442412,39442714,39443446,39444662,39447432,39447692,39448033,39448594,39451052,39452156,39452684,39453707,39454909,39458370,39459086,39460632,39461883,39463612,39465095,39468615,39469547,39479798,39480920,39484601,39485538	39205131,39231243,39250103,39251941,39254375,39258028,39282374,39283301,39283515,39284185,39284428,39285210,39285390,39285758,39287562,39292038,39292843,39293619,39295150,39295882,39297745,39300362,39303078,39309696,39310428,39311000,39315691,39316529,39317407,39318615,39319747,39322715,39323008,39324345,39324734,39327353,39336653,39337331,39340717,39340953,39347210,39349627,39351018,39353231,39357893,39358873,39359264,39361001,39361677,39368314,39370186,39372596,39378523,39379444,39380373,39382152,39385929,39388658,39422535,39422900,39424194,39427614,39428287,39429326,39430068,39430908,39432654,39433155,39434632,39435761,39438008,39439500,39441125,39441325,39442053,39442320,39442567,39442911,39443574,39444835,39447587,39447898,39448152,39448763,39451211,39452350,39452812,39453850,39455097,39458490,39459249,39460794,39462037,39463686,39465112,39468732,39469615,39480009,39481030,39484730,39487177	Gene ID= ENSG00000127603.24 TPM= 28.68 Transcript Type= protein_coding
chr1	39204980	39303275	39204980	39303275	+	transcript3239.chr1.nic@MACF1	transcript3239.chr1.nic	protein_coding	39204980,39231182,39250014,39251846,39254298,39257936,39282208,39283189,39283409,39284066,39284333,39285083,39285297,39285604,39287286,39291910,39292766,39293458,39295046,39295787,39297620,39300210,39302924	39205131,39231243,39250103,39251941,39254375,39258028,39282374,39283301,39283515,39284185,39284428,39285210,39285390,39285758,39287562,39292038,39292843,39293619,39295150,39295882,39297745,39300362,39303275	Gene ID= ENSG00000127603.24 TPM= 3.19 Transcript Type= NA
chr1	39204972	39297880	39204972	39297880	+	transcript3242.chr1.nic@MACF1	transcript3242.chr1.nic	protein_coding	39204972,39231182,39250014,39251846,39254298,39257936,39282208,39283189,39283409,39284066,39284333,39285083,39285297,39285604,39287286,39291910,39292766,39293458,39295046,39295787,39297620	39205131,39231243,39250103,39251941,39254375,39258028,39282374,39283301,39283515,39284185,39284428,39285210,39285390,39285758,39287562,39292038,39292843,39293619,39295150,39295882,39297880	Gene ID= ENSG00000127603.24 TPM= 2.12 Transcript Type= NA
chr1	39204979	39297880	39204979	39297880	+	transcript3244.chr1.nic@MACF1	transcript3244.chr1.nic	protein_coding	39204979,39231182,39250014,39254298,39257936,39282208,39283189,39283409,39284066,39284333,39285083,39285297,39285604,39287286,39291910,39292766,39293458,39295046,39295787,39297620	39205131,39231243,39250103,39254375,39258028,39282374,39283301,39283515,39284185,39284428,39285210,39285390,39285758,39287562,39292038,39292843,39293619,39295150,39295882,39297880	Gene ID= ENSG00000127603.24 TPM= 2.12 Transcript Type= NA
chr1	39110232	39112017	39110232	39112017	-	transcript3259.chr1.nnic@NA	transcript3259.chr1.nnic	NA	39110232	39112017	Gene ID= novel_gene_chr1_3260 TPM= 11.68 Transcript Type= NA
chr1	39390894	39393863	39390894	39393863	+	transcript3257.chr1.nnic@NA	transcript3257.chr1.nnic	NA	39390894	39393863	Gene ID= novel_gene_chr1_3258 TPM= 2.12 Transcript Type= NA
chr1	39425174	39425360	39425174	39425360	-	transcript3263.chr1.nnic@NA	transcript3263.chr1.nnic	NA	39425174	39425360	Gene ID= novel_gene_chr1_3264 TPM= 2.12 Transcript Type= NA
chr1	39526740	39529868	39526740	39529868	+	transcript3269.chr1.nnic@NA	transcript3269.chr1.nnic	NA	39526740	39529868	Gene ID= novel_gene_chr1_3270 TPM= 7.44 Transcript Type= NA
chr1	39560816	39576751	39560816	39576751	-	ENST00000372856.7@PABPC4	ENST00000372856.7	protein_coding	39575759,39572393,39571234,39569863,39569595,39568802,39567751,39565106,39564686,39564423,39563614,39562323,39562073,39561685,39560816	39576751,39572586,39571349,39570002,39569689,39568939,39567846,39565378,39564773,39564542,39563741,39562416,39562203,39561787,39561122	Gene ID= ENSG00000090621.13 TPM= 31.15 Transcript Type= protein_coding
chr1	39560816	39576744	39560816	39576744	-	ENST00000372857.7@PABPC4	ENST00000372857.7	protein_coding	39575759,39572393,39571234,39569863,39569595,39568802,39567751,39565106,39564686,39564471,39563836,39563614,39562323,39562073,39561685,39560816	39576744,39572586,39571349,39570002,39569689,39568939,39567846,39565378,39564773,39564542,39563922,39563741,39562416,39562203,39561787,39561122	Gene ID= ENSG00000090621.13 TPM= 22.66 Transcript Type= protein_coding
chr1	39560816	39576253	39560816	39576253	-	ENST00000372862.7@PABPC4	ENST00000372862.7	protein_coding	39575759,39572393,39571234,39569863,39569595,39568802,39567751,39565106,39564686,39564471,39563614,39562323,39562073,39561685,39560816	39576253,39572586,39571349,39570002,39569689,39568939,39567846,39565378,39564773,39564542,39563741,39562416,39562203,39561787,39561122	Gene ID= ENSG00000090621.13 TPM= 3.54 Transcript Type= protein_coding
chr1	39576675	39576878	39576675	39576878	-	transcript3284.chr1.nnic@NA	transcript3284.chr1.nnic	NA	39576675	39576878	Gene ID= novel_gene_chr1_3285 TPM= 4.25 Transcript Type= NA
chr1	39618220	39620616	39618220	39620616	-	transcript3292.chr1.nnic@NA	transcript3292.chr1.nnic	NA	39618220	39620616	Gene ID= novel_gene_chr1_3293 TPM= 3.19 Transcript Type= NA
chr1	39622060	39625162	39622060	39625162	-	transcript3294.chr1.nnic@NA	transcript3294.chr1.nnic	NA	39622060	39625162	Gene ID= novel_gene_chr1_3295 TPM= 5.31 Transcript Type= NA
chr1	39628594	39639644	39628594	39639644	-	transcript3289.chr1.nic@HEYL	transcript3289.chr1.nic	protein_coding	39639546,39632649,39631496,39628594	39639644,39632715,39631579,39630308	Gene ID= ENSG00000163909.7 TPM= 2.12 Transcript Type= NA
chr1	39624153	39626687	39624153	39626687	-	transcript3290.chr1.nnic@HEYL	transcript3290.chr1.nnic	protein_coding	39625910,39624153	39626687,39625737	Gene ID= ENSG00000163909.7 TPM= 5.31 Transcript Type= NA
chr1	39652094	39655014	39652094	39655014	+	transcript3305.chr1.nnic@NA	transcript3305.chr1.nnic	NA	39652094	39655014	Gene ID= novel_gene_chr1_3306 TPM= 14.87 Transcript Type= NA
chr1	39738884	39763911	39738884	39763911	+	transcript3309.chr1.nnic@PPIE	transcript3309.chr1.nnic	protein_coding	39738884,39740165,39741366,39741895,39743216,39743824,39745375,39748903,39752910,39762517,39763651	39738931,39740263,39741409,39741921,39743297,39743924,39745498,39749088,39753052,39762651,39763911	Gene ID= ENSG00000084072.16 TPM= 3.19 Transcript Type= NA
chr1	39738882	39753707	39738882	39753707	+	ENST00000324379.9@PPIE	ENST00000324379.9	protein_coding	39738882,39740165,39741366,39741895,39743216,39743824,39745375,39748903,39752910,39753287	39738931,39740263,39741409,39741921,39743297,39743924,39745498,39749088,39753052,39753707	Gene ID= ENSG00000084072.16 TPM= 88.69 Transcript Type= protein_coding
chr1	39738901	39763914	39738901	39763914	+	ENST00000372830.5@PPIE	ENST00000372830.5	protein_coding	39738901,39740165,39741366,39741895,39743216,39743824,39745375,39748903,39752910,39762517,39763689	39738931,39740263,39741409,39741921,39743297,39743924,39745498,39749088,39753052,39762651,39763914	Gene ID= ENSG00000084072.16 TPM= 5.31 Transcript Type= protein_coding
chr1	39738908	39753716	39738908	39753716	+	ENST00000475350.5@PPIE	ENST00000475350.5	protein_coding	39738908,39740165,39741366,39741895,39743216,39743824,39745414,39748903,39752910,39753287	39738923,39740263,39741409,39741921,39743297,39743924,39745498,39749088,39753052,39753716	Gene ID= ENSG00000084072.16 TPM= 10.09 Transcript Type= nonsense_mediated_decay
chr1	39738885	39763914	39738885	39763914	+	ENST00000356511.6@PPIE	ENST00000356511.6	protein_coding	39738885,39740165,39741366,39741895,39743216,39743824,39745375,39748903,39752910,39763689	39738931,39740263,39741409,39741921,39743297,39743924,39745498,39749088,39753052,39763914	Gene ID= ENSG00000084072.16 TPM= 3.19 Transcript Type= protein_coding
chr1	39757182	39788861	39757182	39788861	-	ENST00000372827.7@BMP8B	ENST00000372827.7	protein_coding	39788152,39774849,39774308,39764623,39763712,39763092,39757182	39788861,39775038,39774456,39764817,39763791,39763202,39760568	Gene ID= ENSG00000116985.11 TPM= 1.06 Transcript Type= protein_coding
chr1	39799422	39805452	39799422	39805452	+	ENST00000641382.1@AL033527.5	ENST00000641382.1	lincRNA	39799422,39800326,39804878	39799581,39800391,39805452	Gene ID= ENSG00000284719.1 TPM= 1.06 Transcript Type= lincRNA
chr1	39841051	39883506	39841051	39883506	-	ENST00000316891.9@TRIT1	ENST00000316891.9	protein_coding	39883318,39857277,39853970,39852731,39850119,39847986,39847548,39847220,39844531,39844101,39841051	39883506,39857417,39854068,39852876,39850261,39848097,39847660,39847297,39844640,39844218,39841913	Gene ID= ENSG00000043514.15 TPM= 12.75 Transcript Type= protein_coding
chr1	39895426	39902013	39895426	39902013	-	ENST00000397332.2@MYCL	ENST00000397332.2	protein_coding	39901808,39900939,39895426	39902013,39901443,39897970	Gene ID= ENSG00000116990.10 TPM= 2.12 Transcript Type= protein_coding
chr1	39955130	39969966	39955130	39969966	+	ENST00000372811.9@MFSD2A	ENST00000372811.9	protein_coding	39955130,39957087,39958701,39965211,39965471,39965857,39966601,39966811,39967086,39967628,39967804,39968334,39968569,39969505	39955385,39957221,39958825,39965334,39965549,39966014,39966691,39966932,39967169,39967711,39967916,39968477,39968745,39969966	Gene ID= ENSG00000168389.17 TPM= 3.19 Transcript Type= protein_coding
chr1	40040728	40072649	40040728	40072649	+	transcript3331.chr1.nic@CAP1	transcript3331.chr1.nic	protein_coding	40040728,40041429,40059334,40060067,40061735,40064227,40064474,40066215,40067540,40069690,40070159,40070430,40070836,40071450	40040783,40041493,40059458,40060170,40061812,40064370,40064559,40066320,40067717,40069874,40070282,40070512,40070979,40072649	Gene ID= ENSG00000131236.16 TPM= 8.5 Transcript Type= NA
chr1	40040233	40072649	40040233	40072649	+	ENST00000372797.7@CAP1	ENST00000372797.7	protein_coding	40040233,40059337,40060067,40061735,40064227,40064474,40066215,40067540,40069690,40070159,40070430,40070836,40071450	40040783,40059458,40060170,40061812,40064370,40064559,40066320,40067717,40069874,40070282,40070512,40070979,40072649	Gene ID= ENSG00000131236.16 TPM= 32.93 Transcript Type= protein_coding
chr1	40040761	40072271	40040761	40072271	+	ENST00000372805.7@CAP1	ENST00000372805.7	protein_coding	40040761,40059337,40060067,40061735,40064227,40064474,40066215,40067540,40069690,40070159,40070430,40070836,40071450	40040801,40059458,40060170,40061812,40064370,40064559,40066320,40067717,40069874,40070282,40070512,40070979,40072271	Gene ID= ENSG00000131236.16 TPM= 32.93 Transcript Type= protein_coding
chr1	40072710	40097247	40072710	40097247	-	ENST00000641471.1@PPT1	ENST00000641471.1	protein_coding	40097115,40093933,40092398,40092045,40091329,40089410,40080397,40078560,40076842,40072710	40097247,40094019,40092507,40092172,40091399,40089512,40080487,40078658,40076913,40074183	Gene ID= ENSG00000131238.17 TPM= 1.06 Transcript Type= protein_coding
chr1	40071461	40097727	40071461	40097727	-	ENST00000642050.1@PPT1	ENST00000642050.1	protein_coding	40097115,40092398,40092045,40091329,40089410,40080397,40078560,40076842,40071461	40097727,40092507,40092172,40091399,40089512,40080487,40078658,40076913,40074183	Gene ID= ENSG00000131238.17 TPM= 55.23 Transcript Type= protein_coding
chr1	40072726	40097252	40072726	40097252	-	ENST00000433473.8@PPT1	ENST00000433473.8	protein_coding	40097115,40092398,40092045,40091329,40089410,40080397,40078560,40076842,40072726	40097252,40092504,40092172,40091399,40089512,40080487,40078658,40076913,40074183	Gene ID= ENSG00000131238.17 TPM= 53.11 Transcript Type= protein_coding
chr1	40161365	40191553	40161365	40191553	+	transcript3353.chr1.nic@RLF	transcript3353.chr1.nic	protein_coding	40161365,40189055	40161636,40191553	Gene ID= ENSG00000117000.8 TPM= 2.12 Transcript Type= NA
chr1	40256427	40257967	40256427	40257967	-	ENST00000567508.1@AL050341.2	ENST00000567508.1	antisense_RNA	40256427	40257967	Gene ID= ENSG00000259943.1 TPM= 3.19 Transcript Type= antisense_RNA
chr1	40258210	40294184	40258210	40294184	+	transcript3354.chr1.nnic@ZMPSTE24	transcript3354.chr1.nnic	protein_coding	40258210,40260839,40267786,40268419,40269975,40271894,40280120,40281343,40285925,40290854,40292445	40258394,40260985,40267872,40268535,40270127,40272035,40280312,40281527,40286029,40290997,40294184	Gene ID= ENSG00000084073.8 TPM= 3.19 Transcript Type= NA
chr1	40258236	40294172	40258236	40294172	+	transcript3358.chr1.nnic@ZMPSTE24	transcript3358.chr1.nnic	protein_coding	40258236,40260839,40267786,40268419,40269975,40271894,40281343,40285925,40292445	40258394,40260985,40267872,40268535,40270127,40272035,40281527,40286029,40294172	Gene ID= ENSG00000084073.8 TPM= 2.12 Transcript Type= NA
chr1	40258107	40294184	40258107	40294184	+	ENST00000372759.3@ZMPSTE24	ENST00000372759.3	protein_coding	40258107,40260839,40267786,40268419,40269975,40271894,40281343,40285925,40290854,40292445	40258394,40260985,40267872,40268535,40270127,40272035,40281527,40286029,40290997,40294184	Gene ID= ENSG00000084073.8 TPM= 39.3 Transcript Type= protein_coding
chr1	40373687	40423324	40373687	40423324	+	transcript3361.chr1.nnic@SMAP2	transcript3361.chr1.nnic	protein_coding	40373687,40406736,40408653,40409757,40413016,40413571,40414159,40415272,40416176,40416780,40421976	40374223,40406869,40408738,40409835,40413102,40413730,40414240,40415381,40416341,40417096,40423324	Gene ID= ENSG00000084070.11 TPM= 2.66 Transcript Type= NA
chr1	40373697	40423326	40373697	40423326	+	ENST00000372718.7@SMAP2	ENST00000372718.7	protein_coding	40373697,40406736,40408653,40409757,40413016,40414159,40415272,40416176,40416780,40421976	40374223,40406869,40408738,40409835,40413102,40414240,40415381,40416341,40417096,40423326	Gene ID= ENSG00000084070.11 TPM= 16.46 Transcript Type= protein_coding
chr1	40450107	40463718	40450107	40463718	+	ENST00000411995.6@ZFP69B	ENST00000411995.6	protein_coding	40450107,40450656,40454203,40456945,40457344,40462421	40450175,40451088,40454288,40457071,40457439,40463718	Gene ID= ENSG00000187801.14 TPM= 1.06 Transcript Type= protein_coding
chr1	40477215	40496343	40477215	40496343	+	ENST00000372706.5@ZFP69	ENST00000372706.5	protein_coding	40477215,40479036,40481763,40489088,40489529,40494921	40477894,40479488,40481854,40489214,40489624,40496343	Gene ID= ENSG00000187815.9 TPM= 2.12 Transcript Type= protein_coding
chr1	40508741	40516036	40508741	40516036	+	ENST00000358527.6@EXO5	ENST00000358527.6	protein_coding	40508741,40509451,40509733,40514515	40508877,40509625,40509790,40516036	Gene ID= ENSG00000164002.11 TPM= 1.06 Transcript Type= protein_coding
chr1	40531561	40548169	40531561	40548169	+	ENST00000372699.7@ZNF684	ENST00000372699.7	protein_coding	40531561,40533143,40540586,40541615,40546562	40531787,40533181,40540712,40541710,40548169	Gene ID= ENSG00000117010.15 TPM= 2.12 Transcript Type= protein_coding
chr1	40532360	40534117	40532360	40534117	-	transcript3384.chr1.nnic@NA	transcript3384.chr1.nnic	NA	40532360	40534117	Gene ID= novel_gene_chr1_3385 TPM= 4.25 Transcript Type= NA
chr1	40690380	40692066	40690380	40692066	-	ENST00000606277.1@NFYC-AS1	ENST00000606277.1	antisense_RNA	40690380	40692066	Gene ID= ENSG00000272145.1 TPM= 1.06 Transcript Type= antisense_RNA
chr1	40691680	40771603	40691680	40771603	+	transcript3390.chr1.nic@NFYC	transcript3390.chr1.nic	protein_coding	40691680,40738836,40747534,40749573,40753151,40758121,40762888,40766596,40769356,40770397	40691867,40738948,40747605,40749686,40753246,40758294,40763046,40766703,40769415,40771603	Gene ID= ENSG00000066136.20 TPM= 13.28 Transcript Type= NA
chr1	40691743	40771601	40691743	40771601	+	ENST00000456393.6@NFYC	ENST00000456393.6	protein_coding	40691743,40738836,40747534,40749573,40753151,40758121,40762888,40766596,40769356,40770712	40691867,40738948,40747605,40749686,40753246,40758294,40763046,40766703,40769415,40771601	Gene ID= ENSG00000066136.20 TPM= 48.33 Transcript Type= protein_coding
chr1	40861051	40862366	40861051	40862366	-	ENST00000372638.3@CITED4	ENST00000372638.3	protein_coding	40861051	40862366	Gene ID= ENSG00000179862.6 TPM= 50.98 Transcript Type= protein_coding
chr1	40979335	41012565	40979335	41012565	+	ENST00000372621.8@CTPS1	ENST00000372621.8	protein_coding	40979335,40983278,40984821,40987372,40988594,40991165,40991765,40995917,40997394,41001029,41002160,41003114,41006051,41007449,41008659,41008794,41009445,41010161,41011658	40979829,40983456,40984991,40987472,40988710,40991248,40991845,40996068,40997526,41001117,41002254,41003176,41006094,41007545,41008714,41008890,41009589,41010254,41012565	Gene ID= ENSG00000171793.13 TPM= 10.62 Transcript Type= protein_coding
chr1	41027202	41242312	41027202	41242312	-	transcript3420.chr1.nic@SCMH1	transcript3420.chr1.nic	protein_coding	41242059,41186121,41161364,41160875,41159725,41152599,41151614,41142878,41116922,41113283,41075219,41070595,41048690,41046407,41037362,41028584,41027202	41242312,41186250,41161432,41160898,41159933,41152741,41151684,41143112,41117010,41113526,41075451,41070721,41048890,41046598,41037541,41028726,41028319	Gene ID= ENSG00000010803.16 TPM= 9.88 Transcript Type= NA
chr1	41027202	41242312	41027202	41242312	-	transcript3423.chr1.nic@SCMH1	transcript3423.chr1.nic	protein_coding	41242059,41186121,41161364,41160875,41159725,41142878,41116922,41113283,41075219,41070595,41048690,41046407,41037362,41033983,41028584,41027202	41242312,41186250,41161432,41160898,41159933,41143112,41117010,41113526,41075451,41070721,41048890,41046598,41037541,41034048,41028726,41028319	Gene ID= ENSG00000010803.16 TPM= 35.1 Transcript Type= NA
chr1	41027202	41242312	41027202	41242312	-	transcript3427.chr1.nnic@SCMH1	transcript3427.chr1.nnic	protein_coding	41242059,41186121,41075219,41070595,41048690,41046407,41037362,41028584,41027202	41242312,41186250,41075451,41070721,41048890,41046598,41037541,41028726,41028319	Gene ID= ENSG00000010803.16 TPM= 7.49 Transcript Type= NA
chr1	41027202	41242116	41027202	41242116	-	ENST00000372596.5@SCMH1	ENST00000372596.5	protein_coding	41242059,41186121,41161364,41160875,41159725,41151614,41142878,41116922,41113283,41075219,41070595,41048690,41046407,41037362,41028584,41027202	41242116,41186250,41161432,41160898,41159933,41151684,41143112,41117010,41113526,41075451,41070721,41048890,41046598,41037541,41028726,41028319	Gene ID= ENSG00000010803.16 TPM= 9.88 Transcript Type= protein_coding
chr1	41027202	41242116	41027202	41242116	-	ENST00000372597.5@SCMH1	ENST00000372597.5	protein_coding	41242059,41186121,41161364,41160875,41159725,41142878,41116922,41113283,41075219,41070595,41048690,41046407,41037362,41028584,41027202	41242116,41186250,41161432,41160898,41159933,41143112,41117010,41113526,41075451,41070721,41048890,41046598,41037541,41028726,41028319	Gene ID= ENSG00000010803.16 TPM= 8.82 Transcript Type= protein_coding
chr1	41244449	41248479	41244449	41248479	-	transcript3436.chr1.nnic@NA	transcript3436.chr1.nnic	NA	41244449	41248479	Gene ID= novel_gene_chr1_3437 TPM= 5.31 Transcript Type= NA
chr1	41381016	41382648	41381016	41382648	-	transcript3438.chr1.nnic@NA	transcript3438.chr1.nnic	NA	41381016	41382648	Gene ID= novel_gene_chr1_3439 TPM= 2.12 Transcript Type= NA
chr1	41478775	41484671	41478775	41484671	-	ENST00000372587.4@EDN2	ENST00000372587.4	protein_coding	41484538,41484047,41482466,41481095,41478775	41484671,41484203,41482588,41481193,41479502	Gene ID= ENSG00000127129.9 TPM= 2.12 Transcript Type= protein_coding
chr1	41847191	42035925	41847191	42035925	-	ENST00000489103.5@HIVEP3	ENST00000489103.5	protein_coding	42035807,41918413,41848871,41847191	42035925,41918524,41849089,41848445	Gene ID= ENSG00000127124.14 TPM= 1.06 Transcript Type= processed_transcript
chr1	41896579	41899630	41896579	41899630	-	transcript3451.chr1.nnic@NA	transcript3451.chr1.nnic	NA	41896579	41899630	Gene ID= novel_gene_chr1_3452 TPM= 2.12 Transcript Type= NA
chr1	42176545	42335232	42176545	42335232	-	ENST00000361346.5@FOXJ3	ENST00000361346.5	protein_coding	42335059,42311050,42278348,42265115,42227883,42205762,42199102,42194890,42191303,42189303,42188737,42181917,42176545	42335232,42311110,42278672,42265189,42227966,42205863,42199230,42195064,42191719,42189404,42188928,42182024,42179825	Gene ID= ENSG00000198815.8 TPM= 11.68 Transcript Type= protein_coding
chr1	42176545	42335215	42176545	42335215	-	ENST00000361776.5@FOXJ3	ENST00000361776.5	protein_coding	42335059,42311050,42278348,42265115,42227883,42199102,42194890,42191303,42189303,42188737,42181917,42176545	42335215,42311110,42278672,42265189,42227966,42199230,42195064,42191719,42189404,42188928,42182024,42179825	Gene ID= ENSG00000198815.8 TPM= 14.87 Transcript Type= protein_coding
chr1	42305585	42309016	42305585	42309016	+	transcript3462.chr1.nnic@NA	transcript3462.chr1.nnic	NA	42305585	42309016	Gene ID= novel_gene_chr1_3463 TPM= 4.25 Transcript Type= NA
chr1	42336874	42338227	42336874	42338227	+	transcript3464.chr1.nnic@NA	transcript3464.chr1.nnic	NA	42336874	42338227	Gene ID= novel_gene_chr1_3465 TPM= 2.12 Transcript Type= NA
chr1	42430329	42456267	42430329	42456267	-	ENST00000372565.7@ZMYND12	ENST00000372565.7	protein_coding	42455888,42449918,42448467,42439856,42436421,42435274,42433143,42430329	42456267,42450059,42448638,42440025,42436543,42435385,42433288,42430858	Gene ID= ENSG00000066185.12 TPM= 2.12 Transcript Type= protein_coding
chr1	42456559	42460414	42456559	42460414	+	ENST00000372561.3@PPCS	ENST00000372561.3	protein_coding	42456559,42457247,42459603	42457073,42457350,42460414	Gene ID= ENSG00000127125.8 TPM= 87.1 Transcript Type= protein_coding
chr1	42456561	42460414	42456561	42460414	+	ENST00000372556.3@PPCS	ENST00000372556.3	protein_coding	42456561,42457247,42459603	42456628,42457350,42460414	Gene ID= ENSG00000127125.8 TPM= 25.49 Transcript Type= protein_coding
chr1	42658425	42676758	42658425	42676758	+	ENST00000304979.7@PPIH	ENST00000304979.7	protein_coding	42658425,42658844,42659228,42659522,42660862,42664863,42665980,42666547,42667351,42676584	42658512,42658908,42659251,42659566,42660904,42664955,42666067,42666587,42667440,42676758	Gene ID= ENSG00000171960.10 TPM= 25.49 Transcript Type= protein_coding
chr1	42682385	42702349	42682385	42702349	+	transcript3497.chr1.nic@YBX1	transcript3497.chr1.nic	protein_coding	42682385,42683403,42693490,42696642,42697180,42700781,42701981	42682731,42683466,42693523,42696944,42697262,42701046,42702349	Gene ID= ENSG00000065978.18 TPM= 45.85 Transcript Type= NA
chr1	42682987	42702349	42682987	42702349	+	ENST00000436427.1@YBX1	ENST00000436427.1	protein_coding	42682987,42693490,42696199,42696642,42697180,42700781,42701981	42683365,42693523,42696288,42696944,42697262,42701046,42702349	Gene ID= ENSG00000065978.18 TPM= 27.27 Transcript Type= protein_coding
chr1	42682427	42702349	42682427	42702349	+	ENST00000321358.11@YBX1	ENST00000321358.11	protein_coding	42682427,42683403,42693490,42696199,42696642,42697180,42700781,42701981	42682731,42683466,42693523,42696288,42696944,42697262,42701046,42702349	Gene ID= ENSG00000065978.18 TPM= 245.54 Transcript Type= protein_coding
chr1	42746335	42767053	42746335	42767053	-	transcript3504.chr1.nic@P3H1	transcript3504.chr1.nic	protein_coding	42766507,42762323,42759201,42758852,42757783,42755548,42754869,42752537,42752274,42750186,42748200,42747723,42747253,42746335	42767053,42762475,42759390,42758983,42757922,42755637,42755217,42752664,42752369,42750336,42748317,42747798,42747412,42746852	Gene ID= ENSG00000117385.15 TPM= 2.39 Transcript Type= NA
chr1	42746374	42766989	42746374	42766989	-	ENST00000460031.5@P3H1	ENST00000460031.5	protein_coding	42766507,42762323,42759201,42758852,42757783,42755548,42754869,42752537,42752274,42750186,42748200,42747723,42747272,42746374	42766989,42762475,42759390,42758983,42757922,42755637,42755217,42752664,42752369,42750336,42748317,42747798,42747412,42746852	Gene ID= ENSG00000117385.15 TPM= 8.76 Transcript Type= retained_intron
chr1	42746375	42767023	42746375	42767023	-	ENST00000296388.9@P3H1	ENST00000296388.9	protein_coding	42766507,42762323,42759201,42758852,42757783,42755548,42755165,42754869,42752537,42752274,42750186,42748200,42747723,42747272,42746375	42767023,42762475,42759390,42758983,42757922,42755637,42755217,42754990,42752664,42752369,42750336,42748317,42747798,42747412,42746852	Gene ID= ENSG00000117385.15 TPM= 7.7 Transcript Type= protein_coding
chr1	42746375	42767022	42746375	42767022	-	ENST00000495874.5@P3H1	ENST00000495874.5	protein_coding	42766507,42762323,42759201,42758852,42757783,42756401,42755548,42754869,42752537,42752274,42750186,42748200,42747723,42747272,42746375	42767022,42762475,42759390,42758983,42757922,42756455,42755637,42755217,42752664,42752369,42750336,42748317,42747798,42747412,42746852	Gene ID= ENSG00000117385.15 TPM= 1.33 Transcript Type= retained_intron
chr1	42767269	42775747	42767269	42775747	+	ENST00000372525.5@C1orf50	ENST00000372525.5	protein_coding	42767269,42767509,42773563,42774737,42775209	42767390,42767624,42773649,42774868,42775747	Gene ID= ENSG00000164008.14 TPM= 3.19 Transcript Type= protein_coding
chr1	42767285	42775747	42767285	42775747	+	transcript3512.chr1.nnic@AC098484.3	transcript3512.chr1.nnic	protein_coding	42767285,42773563,42774737,42775209	42767390,42773649,42774868,42775747	Gene ID= ENSG00000283580.1 TPM= 2.12 Transcript Type= NA
chr1	42780278	42781154	42780278	42781154	-	transcript3520.chr1.nnic@NA	transcript3520.chr1.nnic	NA	42780278	42781154	Gene ID= novel_gene_chr1_3521 TPM= 2.12 Transcript Type= NA
chr1	42807056	42817252	42807056	42817252	-	ENST00000372521.8@SVBP	ENST00000372521.8	protein_coding	42817190,42816431,42807056	42817252,42816580,42807500	Gene ID= ENSG00000177868.11 TPM= 5.31 Transcript Type= protein_coding
chr1	42817131	42844983	42817131	42844983	+	ENST00000372517.6@ERMAP	ENST00000372517.6	protein_coding	42817131,42825623,42830444,42830768,42835038,42835732,42837158,42838901,42840033,42840152,42840270,42842517	42817253,42825738,42830533,42831115,42835154,42835764,42837190,42838921,42840053,42840178,42840296,42844983	Gene ID= ENSG00000164010.13 TPM= 2.12 Transcript Type= protein_coding
chr1	42841898	42846387	42841898	42846387	-	ENST00000444563.5@AL512353.1	ENST00000444563.5	antisense_RNA	42846257,42844511,42843404,42842775,42841898	42846387,42844684,42843450,42842916,42842013	Gene ID= ENSG00000228192.7 TPM= 1.06 Transcript Type= antisense_RNA
chr1	42846573	42852473	42846573	42852473	+	ENST00000372502.5@ZNF691	ENST00000372502.5	protein_coding	42846573,42849291,42849565,42850950	42846657,42849413,42849742,42852473	Gene ID= ENSG00000164011.17 TPM= 5.05 Transcript Type= protein_coding
chr1	42846609	42852477	42846609	42852477	+	ENST00000372508.7@ZNF691	ENST00000372508.7	protein_coding	42846609,42850950	42846657,42852477	Gene ID= ENSG00000164011.17 TPM= 8.76 Transcript Type= protein_coding
chr1	42846626	42852477	42846626	42852477	+	ENST00000372507.5@ZNF691	ENST00000372507.5	protein_coding	42846626,42849291,42850950	42846657,42849413,42852477	Gene ID= ENSG00000164011.17 TPM= 3.45 Transcript Type= protein_coding
chr1	42846628	42852477	42846628	42852477	+	ENST00000372506.5@ZNF691	ENST00000372506.5	protein_coding	42846628,42849291,42849565,42850950	42846657,42849413,42849742,42852477	Gene ID= ENSG00000164011.17 TPM= 2.92 Transcript Type= protein_coding
chr1	42925375	42959173	42925375	42959173	-	ENST00000426263.7@SLC2A1	ENST00000426263.7	protein_coding	42958634,42943226,42931046,42930626,42929873,42929593,42929210,42928932,42927605,42925375	42959173,42943321,42931206,42930866,42930035,42929780,42929314,42929033,42927808,42927241	Gene ID= ENSG00000117394.20 TPM= 18.06 Transcript Type= protein_coding
chr1	42951616	42958859	42951616	42958859	-	ENST00000460369.3@SLC2A1	ENST00000460369.3	protein_coding	42958634,42951616	42958859,42951930	Gene ID= ENSG00000117394.20 TPM= 1.06 Transcript Type= protein_coding
chr1	43164346	43172200	43164346	43172200	-	transcript3546.chr1.nic@EBNA1BP2	transcript3546.chr1.nic	protein_coding	43172053,43170756,43168939,43167160,43166826,43164643,43164346	43172200,43171969,43169028,43167235,43166919,43164805,43164493	Gene ID= ENSG00000117395.12 TPM= 2.12 Transcript Type= NA
chr1	43164184	43172260	43164184	43172260	-	ENST00000236051.2@EBNA1BP2	ENST00000236051.2	protein_coding	43172053,43171886,43171479,43170756,43168939,43167160,43166826,43164643,43164184	43172260,43171969,43171651,43170879,43169028,43167235,43166919,43164805,43164493	Gene ID= ENSG00000117395.12 TPM= 6.37 Transcript Type= protein_coding
chr1	43300977	43315291	43300977	43315291	+	transcript3555.chr1.nic@TIE1	transcript3555.chr1.nic	protein_coding	43300977,43304851,43305233,43306840,43307142,43307432,43307796,43308986,43309388,43311671,43311994,43312305,43313135,43313778,43314383,43315161	43301129,43305165,43305343,43306995,43307273,43307572,43307924,43309131,43309532,43311829,43312131,43312601,43313425,43313968,43314478,43315291	Gene ID= ENSG00000066056.13 TPM= 2.12 Transcript Type= NA
chr1	43300993	43323108	43300993	43323108	+	ENST00000372476.7@TIE1	ENST00000372476.7	protein_coding	43300993,43304851,43305233,43306840,43307142,43307432,43307796,43308986,43309388,43311671,43311994,43312305,43313135,43313778,43317199,43317564,43317882,43319235,43319459,43321269,43321396,43321616,43322651	43301129,43305165,43305343,43306995,43307273,43307572,43307924,43309131,43309532,43311829,43312131,43312601,43313425,43313968,43317409,43317674,43318072,43319348,43319529,43321309,43321492,43321715,43323108	Gene ID= ENSG00000066056.13 TPM= 27.62 Transcript Type= protein_coding
chr1	43353449	43354235	43353449	43354235	-	transcript3561.chr1.nnic@NA	transcript3561.chr1.nnic	NA	43353449	43354235	Gene ID= novel_gene_chr1_3562 TPM= 6.37 Transcript Type= NA
chr1	43363397	43368018	43363397	43368018	-	ENST00000372458.7@ELOVL1	ENST00000372458.7	protein_coding	43367915,43365564,43365186,43364928,43364738,43364542,43364324,43363397	43368018,43365623,43365376,43365008,43364794,43364647,43364460,43364137	Gene ID= ENSG00000066322.14 TPM= 40.36 Transcript Type= protein_coding
chr1	43383917	43389808	43383917	43389808	-	ENST00000290663.10@MED8	ENST00000290663.10	protein_coding	43389759,43388310,43387503,43386858,43386589,43385978,43385046,43383917	43389808,43388428,43387647,43386998,43386670,43386226,43385106,43384552	Gene ID= ENSG00000159479.16 TPM= 5.31 Transcript Type= protein_coding
chr1	43383969	43389808	43383969	43389808	-	ENST00000372457.8@MED8	ENST00000372457.8	protein_coding	43389759,43388310,43387503,43386858,43386589,43385978,43383969	43389808,43388428,43387647,43386998,43386670,43386226,43385106	Gene ID= ENSG00000159479.16 TPM= 9.56 Transcript Type= protein_coding
chr1	43384726	43389784	43384726	43389784	-	ENST00000372455.4@MED8	ENST00000372455.4	protein_coding	43389759,43388310,43387503,43386858,43386589,43385978,43384726	43389784,43388489,43387629,43386998,43386670,43386226,43385106	Gene ID= ENSG00000159479.16 TPM= 8.5 Transcript Type= protein_coding
chr1	43451160	43453837	43451160	43453837	-	transcript3588.chr1.nic@HYI	transcript3588.chr1.nic	protein_coding	43453595,43452205,43451935,43451798,43451648,43451428,43451160	43453837,43453497,43452013,43451847,43451717,43451544,43451311	Gene ID= ENSG00000178922.16 TPM= 3.19 Transcript Type= NA
chr1	43451160	43453909	43451160	43453909	-	ENST00000372427.5@HYI	ENST00000372427.5	protein_coding	43452205,43451935,43451798,43451648,43451428,43451160	43453909,43452013,43451847,43451717,43451544,43451311	Gene ID= ENSG00000178922.16 TPM= 1.06 Transcript Type= retained_intron
chr1	43451153	43453806	43451153	43453806	-	transcript3590.chr1.nic@HYI	transcript3590.chr1.nic	protein_coding	43452205,43451935,43451798,43451648,43451153	43453806,43452013,43451847,43451717,43451544	Gene ID= ENSG00000178922.16 TPM= 2.12 Transcript Type= NA
chr1	43451158	43453963	43451158	43453963	-	ENST00000372432.5@HYI	ENST00000372432.5	protein_coding	43453595,43453386,43452205,43451935,43451798,43451648,43451428,43451158	43453963,43453497,43452319,43452013,43451847,43451717,43451544,43451311	Gene ID= ENSG00000178922.16 TPM= 15.93 Transcript Type= protein_coding
chr1	43530890	43622357	43530890	43622357	+	ENST00000438120.5@PTPRF	ENST00000438120.5	protein_coding	43530890,43538198,43545031,43553492,43553800,43569590,43578810,43588731,43590972,43591812,43592457,43597748,43598720,43603416,43603611,43604903,43605190,43605529,43606240,43606814,43609383,43613618,43617445,43617736,43618630,43619048,43619288,43619680,43620095,43620454,43620838,43621097,43621935	43531090,43538277,43545166,43553637,43553941,43569778,43578920,43589000,43591553,43591948,43592601,43598053,43598913,43603533,43604189,43605000,43605443,43605622,43606458,43606968,43609498,43613715,43617568,43617911,43618749,43619202,43619573,43619858,43620221,43620579,43620992,43621232,43622357	Gene ID= ENSG00000142949.16 TPM= 5.31 Transcript Type= protein_coding
chr1	43530903	43580078	43530903	43580078	+	ENST00000436724.5@PTPRF	ENST00000436724.5	protein_coding	43530903,43538198,43545031,43553492,43553800,43569590,43575910,43578810	43531090,43538277,43545166,43553637,43553941,43569778,43575927,43580078	Gene ID= ENSG00000142949.16 TPM= 3.19 Transcript Type= processed_transcript
chr1	43650158	43705515	43650158	43705515	+	ENST00000372396.3@KDM4A	ENST00000372396.3	protein_coding	43650158,43653137,43655591,43660298,43662894,43665696,43666452,43666954,43667772,43669100,43671505,43683684,43688914,43690845,43691496,43692256,43693994,43694709,43697843,43703617,43704020,43704230	43650252,43653313,43655766,43660412,43663087,43665745,43666555,43667091,43668019,43669299,43671875,43683804,43689095,43691049,43691572,43692311,43694102,43694894,43698013,43703736,43704112,43705515	Gene ID= ENSG00000066135.12 TPM= 3.19 Transcript Type= protein_coding
chr1	43699093	43701150	43699093	43701150	-	transcript3597.chr1.nnic@NA	transcript3597.chr1.nnic	NA	43699093	43701150	Gene ID= novel_gene_chr1_3598 TPM= 5.31 Transcript Type= NA
chr1	43707547	43931159	43707547	43931159	+	ENST00000361392.8@ST3GAL3	ENST00000361392.8	protein_coding	43707547,43736233,43792102,43814891,43838219,43894383,43898235,43899168,43899541,43920404,43920782,43930132	43707693,43736380,43792149,43814933,43838311,43894477,43898298,43899263,43899727,43920550,43920928,43931159	Gene ID= ENSG00000126091.19 TPM= 23.72 Transcript Type= protein_coding
chr1	43707547	43931159	43707547	43931159	+	ENST00000361400.8@ST3GAL3	ENST00000361400.8	protein_coding	43707547,43736233,43814891,43838219,43894383,43898235,43899168,43899541,43920404,43920782,43930132	43707693,43736380,43814933,43838311,43894477,43898298,43899263,43899727,43920550,43920928,43931159	Gene ID= ENSG00000126091.19 TPM= 4.6 Transcript Type= protein_coding
chr1	43707533	43931165	43707533	43931165	+	ENST00000353126.7@ST3GAL3	ENST00000353126.7	protein_coding	43707533,43736233,43792102,43814891,43838219,43894383,43898235,43899168,43899541,43930132	43707693,43736380,43792149,43814933,43838311,43894477,43898298,43899263,43899727,43931165	Gene ID= ENSG00000126091.19 TPM= 3.54 Transcript Type= protein_coding
chr1	43946971	43959485	43946971	43959485	+	transcript3619.chr1.nic@IPO13	transcript3619.chr1.nic	protein_coding	43946971,43949417,43956320,43956560,43956810,43957195,43957402,43957977,43958242,43958461,43958746	43947684,43950153,43956460,43956701,43956976,43957315,43957549,43958158,43958268,43958595,43959485	Gene ID= ENSG00000117408.10 TPM= 3.19 Transcript Type= NA
chr1	43946913	43950360	43946913	43950360	+	transcript3621.chr1.nic@IPO13	transcript3621.chr1.nic	protein_coding	43946913,43949417	43947684,43950360	Gene ID= ENSG00000117408.10 TPM= 2.12 Transcript Type= NA
chr1	43946939	43968022	43946939	43968022	+	ENST00000372343.7@IPO13	ENST00000372343.7	protein_coding	43946939,43949417,43956320,43956560,43956810,43957195,43957402,43957977,43958242,43958461,43958746,43960249,43960876,43961166,43964269,43966575,43966724,43966930,43967315,43967586	43947684,43950153,43956460,43956701,43956976,43957315,43957549,43958158,43958268,43958595,43958889,43960329,43961013,43961262,43964321,43966641,43966782,43967019,43967496,43968022	Gene ID= ENSG00000117408.10 TPM= 24.43 Transcript Type= protein_coding
chr1	43948302	43950358	43948302	43950358	+	transcript3622.chr1.nnic@NA	transcript3622.chr1.nnic	NA	43948302	43950358	Gene ID= novel_gene_chr1_3623 TPM= 2.12 Transcript Type= NA
chr1	43969989	43973369	43969989	43973369	+	transcript3651.chr1.nnic@NA	transcript3651.chr1.nnic	NA	43969989	43973369	Gene ID= novel_gene_chr1_3652 TPM= 3.54 Transcript Type= NA
chr1	43970004	43973369	43970004	43973369	+	ENST00000255108.7@DPH2	ENST00000255108.7	protein_coding	43970004,43970596,43970966,43971387,43972158,43972415	43970322,43970708,43971189,43972070,43972334,43973369	Gene ID= ENSG00000132768.13 TPM= 20 Transcript Type= protein_coding
chr1	43970010	43973369	43970010	43973369	+	ENST00000495421.1@DPH2	ENST00000495421.1	protein_coding	43970010,43970596,43970966,43971387,43972158,43972415	43970270,43970708,43971189,43972070,43972334,43973369	Gene ID= ENSG00000132768.13 TPM= 3.01 Transcript Type= nonsense_mediated_decay
chr1	43974648	43978294	43974648	43978294	+	ENST00000472174.6@ATP6V0B	ENST00000472174.6	protein_coding	43974648,43975800,43976090,43976302,43976590,43976773,43977026,43977981	43975107,43975848,43976173,43976379,43976659,43976824,43977216,43978294	Gene ID= ENSG00000117410.13 TPM= 106.75 Transcript Type= protein_coding
chr1	43974948	43978289	43974948	43978289	+	ENST00000236067.8@ATP6V0B	ENST00000236067.8	protein_coding	43974948,43976090,43976302,43976590,43976773,43977026,43977981	43975107,43976173,43976379,43976659,43976824,43977216,43978289	Gene ID= ENSG00000117410.13 TPM= 34.52 Transcript Type= protein_coding
chr1	43979178	43991168	43979178	43991168	+	transcript3632.chr1.nic@B4GALT2	transcript3632.chr1.nic	protein_coding	43979178,43981109,43981689,43984865,43985278,43985517,43990298	43979616,43981473,43981924,43985055,43985400,43985621,43991168	Gene ID= ENSG00000117411.16 TPM= 25.31 Transcript Type= NA
chr1	43979202	43991170	43979202	43991170	+	ENST00000372324.5@B4GALT2	ENST00000372324.5	protein_coding	43979202,43981109,43981689,43984865,43985278,43985517,43990298	43979511,43981473,43981924,43985055,43985400,43985621,43991170	Gene ID= ENSG00000117411.16 TPM= 102.85 Transcript Type= protein_coding
chr1	43996483	44031386	43996483	44031386	-	ENST00000372310.7@SLC6A9	ENST00000372310.7	protein_coding	44031306,44024248,44010726,44009965,44008353,44002853,44002512,44002313,44001390,44001164,44000956,44000767,43997855,43996483	44031386,44024362,44010882,44010096,44008623,44002985,44002646,44002416,44001627,44001298,44001055,44000867,43998025,43997739	Gene ID= ENSG00000196517.11 TPM= 3.19 Transcript Type= protein_coding
chr1	44213472	44220681	44213472	44220681	+	transcript3655.chr1.nic@DMAP1	transcript3655.chr1.nic	protein_coding	44213472,44213663,44214350,44214703,44218311,44218588,44219056,44219406,44219806,44220017,44220559	44213527,44213858,44214441,44214898,44218469,44218755,44219241,44219477,44219878,44220309,44220681	Gene ID= ENSG00000178028.13 TPM= 4.11 Transcript Type= NA
chr1	44213491	44220681	44213491	44220681	+	transcript3657.chr1.nic@DMAP1	transcript3657.chr1.nic	protein_coding	44213491,44213749,44214350,44214703,44218311,44218588,44219056,44219406,44219806,44220017,44220559	44213662,44213858,44214441,44214898,44218469,44218755,44219241,44219477,44219878,44220309,44220681	Gene ID= ENSG00000178028.13 TPM= 2.34 Transcript Type= NA
chr1	44213455	44220681	44213455	44220681	+	ENST00000361745.10@DMAP1	ENST00000361745.10	protein_coding	44213455,44213749,44214350,44214703,44218311,44218588,44219056,44219406,44219806,44220017,44220559	44213527,44213858,44214441,44214898,44218469,44218755,44219241,44219477,44219878,44220309,44220681	Gene ID= ENSG00000178028.13 TPM= 2.34 Transcript Type= protein_coding
chr1	44213488	44220681	44213488	44220681	+	ENST00000315913.9@DMAP1	ENST00000315913.9	protein_coding	44213488,44213709,44214350,44214703,44218311,44218588,44219056,44219406,44219806,44220017,44220559	44213527,44213858,44214441,44214898,44218469,44218755,44219241,44219477,44219878,44220309,44220681	Gene ID= ENSG00000178028.13 TPM= 21.11 Transcript Type= protein_coding
chr1	44213491	44220681	44213491	44220681	+	ENST00000372289.6@DMAP1	ENST00000372289.6	protein_coding	44213491,44214350,44214703,44218311,44218588,44219056,44219406,44219806,44220017,44220559	44213858,44214441,44214898,44218469,44218755,44219241,44219477,44219878,44220309,44220681	Gene ID= ENSG00000178028.13 TPM= 8.36 Transcript Type= protein_coding
chr1	44221070	44355278	44221070	44355278	-	transcript3662.chr1.nnic@ERI3	transcript3662.chr1.nnic	protein_coding	44355260,44352850,44339045,44319628,44313169,44308310,44284835,44247939,44221070	44355278,44352925,44339322,44319744,44313228,44308401,44284907,44248038,44221640	Gene ID= ENSG00000117419.14 TPM= 6.29 Transcript Type= NA
chr1	44221070	44355290	44221070	44355290	-	transcript3664.chr1.nnic@ERI3	transcript3664.chr1.nnic	protein_coding	44355260,44339045,44319628,44313169,44308310,44284835,44247939,44221070	44355290,44339322,44319744,44313228,44308401,44284907,44248038,44221640	Gene ID= ENSG00000117419.14 TPM= 16.91 Transcript Type= NA
chr1	44221070	44355260	44221070	44355260	-	transcript3669.chr1.nic@ERI3	transcript3669.chr1.nic	protein_coding	44354892,44319628,44313169,44308310,44284835,44247939,44221070	44355260,44319744,44313228,44308401,44284907,44248038,44221640	Gene ID= ENSG00000117419.14 TPM= 6.29 Transcript Type= NA
chr1	44221070	44355309	44221070	44355309	-	transcript3670.chr1.nnic@ERI3	transcript3670.chr1.nnic	protein_coding	44355260,44319628,44313169,44308310,44284835,44247939,44221070	44355309,44319744,44313228,44308401,44284907,44248038,44221640	Gene ID= ENSG00000117419.14 TPM= 12.66 Transcript Type= NA
chr1	44221070	44355208	44221070	44355208	-	ENST00000372257.6@ERI3	ENST00000372257.6	protein_coding	44354892,44352850,44339045,44319628,44313169,44308310,44284835,44247939,44221070	44355208,44352925,44339322,44319744,44313228,44308401,44284907,44248038,44221640	Gene ID= ENSG00000117419.14 TPM= 85.15 Transcript Type= protein_coding
chr1	44351832	44355280	44351832	44355280	-	transcript3674.chr1.nnic@NA	transcript3674.chr1.nnic	NA	44351832	44355280	Gene ID= novel_gene_chr1_3675 TPM= 2.12 Transcript Type= NA
chr1	44631952	44651723	44631952	44651723	+	transcript3677.chr1.nic@RNF220	transcript3677.chr1.nic	protein_coding	44631952,44632343,44635545,44636030,44644698,44644995,44645221,44645410,44649661,44649883,44650704	44632208,44632385,44635588,44636162,44644794,44645081,44645276,44645488,44649769,44649957,44651723	Gene ID= ENSG00000187147.17 TPM= 49.39 Transcript Type= NA
chr1	44631952	44651723	44631952	44651723	+	transcript3678.chr1.nic@RNF220	transcript3678.chr1.nic	protein_coding	44631952,44632343,44635545,44636030,44644698,44644995,44645221,44645410,44649661,44649883,44650704	44632208,44632385,44635666,44636162,44644794,44645081,44645276,44645488,44649769,44649957,44651723	Gene ID= ENSG00000187147.17 TPM= 32.4 Transcript Type= NA
chr1	44631952	44636492	44631952	44636492	+	transcript3683.chr1.nic@RNF220	transcript3683.chr1.nic	protein_coding	44631952,44632343,44635545,44636030	44632208,44632385,44635588,44636492	Gene ID= ENSG00000187147.17 TPM= 5.31 Transcript Type= NA
chr1	44631984	44636495	44631984	44636495	+	ENST00000488865.2@RNF220	ENST00000488865.2	protein_coding	44631984,44632343,44635545,44636030	44632212,44632385,44635666,44636495	Gene ID= ENSG00000187147.17 TPM= 2.12 Transcript Type= nonsense_mediated_decay
chr1	44635238	44674474	44635238	44674474	-	transcript3682.chr1.nic@TMEM53	transcript3682.chr1.nic	protein_coding	44674331,44660174,44654940,44645360,44635238	44674474,44660295,44655119,44645464,44636457	Gene ID= ENSG00000126106.13 TPM= 6.37 Transcript Type= NA
chr1	44635238	44674477	44635238	44674477	-	ENST00000372244.3@TMEM53	ENST00000372244.3	protein_coding	44674331,44645360,44635238	44674477,44645464,44636457	Gene ID= ENSG00000126106.13 TPM= 8.5 Transcript Type= protein_coding
chr1	44775437	44778779	44775437	44778779	+	ENST00000396651.7@RPS8	ENST00000396651.7	protein_coding	44775437,44776034,44776675,44777614,44778000,44778576	44775600,44776140,44776774,44777789,44778129,44778779	Gene ID= ENSG00000142937.11 TPM= 205 Transcript Type= protein_coding
chr1	44799884	44805990	44799884	44805990	+	transcript3700.chr1.nic@PLK3	transcript3700.chr1.nic	protein_coding	44799884,44800840,44801036,44801622,44801845,44802760,44802955,44803268,44803600,44803931,44804163,44804339,44805266,44805487	44800673,44800947,44801152,44801751,44801932,44802855,44803153,44803391,44803691,44804024,44804246,44804501,44805379,44805990	Gene ID= ENSG00000173846.12 TPM= 3.19 Transcript Type= NA
chr1	44850522	44986722	44850522	44986722	-	ENST00000620860.4@EIF2B3	ENST00000620860.4	protein_coding	44986493,44981021,44978315,44941506,44926628,44897355,44881612,44879818,44875618,44874678,44850522	44986722,44981177,44978460,44941665,44926739,44897444,44881739,44880008,44875695,44874826,44851003	Gene ID= ENSG00000070785.16 TPM= 1.06 Transcript Type= protein_coding
chr1	44850778	44986610	44850778	44986610	-	ENST00000360403.6@EIF2B3	ENST00000360403.6	protein_coding	44986493,44981021,44978315,44941506,44926628,44897355,44881612,44879818,44875618,44874678,44857704,44850778	44986610,44981177,44978460,44941665,44926739,44897444,44881739,44880008,44875695,44874826,44857807,44851003	Gene ID= ENSG00000070785.16 TPM= 9.56 Transcript Type= protein_coding
chr1	44874527	44986587	44874527	44986587	-	ENST00000372183.7@EIF2B3	ENST00000372183.7	protein_coding	44986493,44981021,44978315,44941506,44926628,44897355,44881612,44879818,44875618,44874527	44986587,44981177,44978460,44941665,44926739,44897444,44881739,44880008,44875695,44874826	Gene ID= ENSG00000070785.16 TPM= 3.19 Transcript Type= protein_coding
chr1	44878759	44880711	44878759	44880711	-	transcript3714.chr1.nnic@NA	transcript3714.chr1.nnic	NA	44878759	44880711	Gene ID= novel_gene_chr1_3715 TPM= 2.12 Transcript Type= NA
chr1	45002540	45011329	45002540	45011329	-	ENST00000372172.4@HECTD3	ENST00000372172.4	protein_coding	45010889,45010546,45010201,45009986,45009568,45009369,45009144,45008536,45008240,45007413,45007219,45006951,45006692,45005997,45005794,45004600,45004248,45004060,45003855,45003669,45002540	45011329,45010706,45010293,45010121,45009683,45009482,45009226,45008701,45008321,45007595,45007271,45007015,45006795,45006116,45005883,45004806,45004377,45004134,45003936,45003740,45003576	Gene ID= ENSG00000126107.14 TPM= 26.55 Transcript Type= protein_coding
chr1	45012194	45015575	45012194	45015575	+	transcript3721.chr1.nic@UROD	transcript3721.chr1.nic	protein_coding	45012194,45012857,45013136,45013292,45013594,45013909,45014439,45014736,45014940,45015337	45012285,45013019,45013215,45013354,45013791,45014070,45014576,45014836,45015006,45015575	Gene ID= ENSG00000126088.13 TPM= 9.06 Transcript Type= NA
chr1	45012130	45015575	45012130	45015575	+	transcript3723.chr1.nic@UROD	transcript3723.chr1.nic	protein_coding	45012130,45012857,45013136,45013594,45013909,45014439,45014736,45014940,45015337	45012285,45013019,45013354,45013791,45014070,45014576,45014836,45015006,45015575	Gene ID= ENSG00000126088.13 TPM= 3.75 Transcript Type= NA
chr1	45012147	45015575	45012147	45015575	+	ENST00000246337.8@UROD	ENST00000246337.8	protein_coding	45012147,45012907,45013136,45013292,45013594,45013909,45014439,45014736,45014940,45015337	45012285,45013019,45013215,45013354,45013791,45014070,45014576,45014836,45015006,45015575	Gene ID= ENSG00000126088.13 TPM= 92.97 Transcript Type= protein_coding
chr1	45012207	45015575	45012207	45015575	+	ENST00000636293.1@UROD	ENST00000636293.1	protein_coding	45012207,45012907,45013136,45013292,45013594,45013909,45014736,45014940,45015337	45012285,45013019,45013215,45013354,45013791,45014070,45014836,45015006,45015575	Gene ID= ENSG00000126088.13 TPM= 1.63 Transcript Type= protein_coding
chr1	45012252	45015575	45012252	45015575	+	ENST00000494399.5@UROD	ENST00000494399.5	protein_coding	45012252,45012857,45013136,45013594,45013909,45014940,45015337	45012285,45013019,45013354,45013791,45014836,45015006,45015575	Gene ID= ENSG00000126088.13 TPM= 1.41 Transcript Type= processed_transcript
chr1	45329242	45340115	45329242	45340115	-	ENST00000355498.6@MUTYH	ENST00000355498.6	protein_coding	45339976,45334391,45333413,45333285,45333097,45332918,45332763,45332574,45332391,45332166,45332023,45331661,45331420,45331182,45330516,45329242	45340115,45334511,45333561,45333324,45333170,45332959,45332834,45332687,45332488,45332310,45332086,45331849,45331556,45331334,45330557,45329437	Gene ID= ENSG00000132781.17 TPM= 2.12 Transcript Type= protein_coding
chr1	45329242	45340470	45329242	45340470	-	ENST00000372115.7@MUTYH	ENST00000372115.7	protein_coding	45340219,45334391,45333413,45333285,45333097,45332918,45332763,45332574,45332391,45332166,45332023,45331661,45331420,45331182,45330516,45329242	45340470,45334511,45333561,45333324,45333170,45332959,45332834,45332687,45332488,45332310,45332086,45331849,45331556,45331334,45330557,45329437	Gene ID= ENSG00000132781.17 TPM= 1.06 Transcript Type= protein_coding
chr1	45339670	45343975	45339670	45343975	+	ENST00000372090.5@TOE1	ENST00000372090.5	protein_coding	45339670,45341073,45341303,45341473,45341949,45342384,45342843,45343082	45340304,45341215,45341343,45341569,45342107,45342643,45343002,45343975	Gene ID= ENSG00000132773.11 TPM= 4.25 Transcript Type= protein_coding
chr1	45511047	45521956	45511047	45521956	-	ENST00000319248.12@PRDX1	ENST00000319248.12	protein_coding	45521829,45518938,45515654,45514873,45514507,45511047	45521956,45519054,45515807,45514995,45514637,45511414	Gene ID= ENSG00000117450.13 TPM= 165.35 Transcript Type= protein_coding
chr1	45511036	45521938	45511036	45521938	-	ENST00000262746.5@PRDX1	ENST00000262746.5	protein_coding	45521609,45518938,45515654,45514873,45514507,45511036	45521938,45519054,45515807,45514995,45514637,45511414	Gene ID= ENSG00000117450.13 TPM= 6.55 Transcript Type= protein_coding
chr1	45550802	45570047	45550802	45570047	+	transcript3757.chr1.nic@AKR1A1	transcript3757.chr1.nic	protein_coding	45550802,45550966,45552436,45561789,45566569,45566869,45567982,45568485,45568927,45569143,45569891	45550876,45551155,45552563,45561878,45566688,45567020,45568177,45568684,45568999,45569229,45570047	Gene ID= ENSG00000117448.13 TPM= 4.25 Transcript Type= NA
chr1	45550783	45570048	45550783	45570048	+	ENST00000621846.4@AKR1A1	ENST00000621846.4	protein_coding	45550783,45550966,45561789,45566569,45566869,45567982,45568485,45568927,45569143,45569891	45550876,45551155,45561878,45566688,45567020,45568177,45568684,45568999,45569229,45570048	Gene ID= ENSG00000117448.13 TPM= 19.12 Transcript Type= protein_coding
chr1	45550543	45570049	45550543	45570049	+	ENST00000372070.7@AKR1A1	ENST00000372070.7	protein_coding	45550543,45552436,45561789,45566569,45566869,45567982,45568485,45568927,45569143,45569891	45551155,45552563,45561878,45566688,45567020,45568177,45568684,45568999,45569229,45570049	Gene ID= ENSG00000117448.13 TPM= 13.28 Transcript Type= protein_coding
chr1	45551067	45570049	45551067	45570049	+	ENST00000351829.8@AKR1A1	ENST00000351829.8	protein_coding	45551067,45561789,45566569,45566869,45567982,45568485,45568927,45569143,45569891	45551155,45561878,45566688,45567020,45568177,45568684,45568999,45569229,45570049	Gene ID= ENSG00000117448.13 TPM= 6.9 Transcript Type= protein_coding
chr1	45584065	45618247	45584065	45618247	+	ENST00000351223.7@NASP	ENST00000351223.7	protein_coding	45584065,45591223,45602255,45604936,45606482,45613169,45614096,45614293,45615013,45615305,45616337,45616626,45617463,45618061	45584205,45591270,45602365,45605016,45606591,45613248,45614181,45614366,45615201,45615471,45616393,45616703,45617591,45618247	Gene ID= ENSG00000132780.16 TPM= 2.12 Transcript Type= protein_coding
chr1	45597300	45598454	45597300	45598454	-	transcript3766.chr1.nnic@NA	transcript3766.chr1.nnic	NA	45597300	45598454	Gene ID= novel_gene_chr1_3767 TPM= 3.19 Transcript Type= NA
chr1	45627306	45686630	45627306	45686630	-	ENST00000355105.7@GPBP1L1	ENST00000355105.7	protein_coding	45686412,45685576,45660184,45659028,45655190,45654543,45642427,45640210,45634096,45633489,45630482,45629576,45627306	45686630,45685620,45661225,45659142,45655319,45654829,45642499,45640403,45634236,45633647,45630606,45629678,45628408	Gene ID= ENSG00000159592.10 TPM= 13.63 Transcript Type= protein_coding
chr1	45627306	45686556	45627306	45686556	-	transcript3775.chr1.nnic@GPBP1L1	transcript3775.chr1.nnic	protein_coding	45686412,45685576,45660184,45659028,45655190,45654543,45642427,45640210,45634096,45630482,45629576,45627306	45686556,45685620,45661225,45659142,45655319,45654829,45642499,45640403,45634236,45630606,45629678,45628408	Gene ID= ENSG00000159592.10 TPM= 13.1 Transcript Type= NA
chr1	45627304	45686536	45627304	45686536	-	ENST00000290795.7@GPBP1L1	ENST00000290795.7	protein_coding	45686412,45660184,45659028,45655190,45654543,45642427,45640210,45634096,45633489,45630482,45629576,45627304	45686536,45661225,45659142,45655319,45654829,45642499,45640403,45634236,45633647,45630606,45629678,45628408	Gene ID= ENSG00000159592.10 TPM= 10.44 Transcript Type= protein_coding
chr1	45687214	45694443	45687214	45694443	+	ENST00000372025.4@TMEM69	ENST00000372025.4	protein_coding	45687214,45690974,45693204	45688275,45691110,45694443	Gene ID= ENSG00000159596.6 TPM= 22.31 Transcript Type= protein_coding
chr1	45698711	45750661	45698711	45750661	-	transcript3793.chr1.nnic@IPP	transcript3793.chr1.nnic	protein_coding	45750597,45746120,45740901,45729614,45727631,45719203,45716895,45714246,45698711	45750661,45746461,45741332,45729769,45727798,45719340,45717017,45714354,45700190	Gene ID= ENSG00000197429.10 TPM= 4.25 Transcript Type= NA
chr1	45698711	45750649	45698711	45750649	-	ENST00000396478.3@IPP	ENST00000396478.3	protein_coding	45750597,45746120,45740901,45729614,45727631,45719203,45716895,45714246,45698711	45750649,45746461,45741332,45729769,45727798,45719340,45717017,45714466,45700190	Gene ID= ENSG00000197429.10 TPM= 16.99 Transcript Type= protein_coding
chr1	45803576	46036124	45803576	46036124	+	transcript3809.chr1.nnic@MAST2	transcript3809.chr1.nnic	protein_coding	45803576,45824433,45829439,45882364,45959386,45997724,46000959,46002805,46006241,46008296,46010730,46019596,46021950,46022910,46023233,46023772,46025677,46027731,46028768,46029466,46029831,46030129,46030607,46031007,46031391,46032178,46032596,46033802,46034073,46034538	45804072,45824580,45829581,45882395,45959477,45997799,46000979,46002883,46006395,46008371,46010939,46019697,46022082,46022971,46023318,46023980,46025815,46027863,46028933,46029567,46029953,46030238,46030761,46031290,46031585,46032404,46032718,46033938,46034266,46036124	Gene ID= ENSG00000086015.20 TPM= 18.59 Transcript Type= NA
chr1	45803576	45831049	45803576	45831049	+	transcript3814.chr1.nic@MAST2	transcript3814.chr1.nic	protein_coding	45803576,45824433,45829439	45804072,45824580,45831049	Gene ID= ENSG00000086015.20 TPM= 3.19 Transcript Type= NA
chr1	45803613	46036124	45803613	46036124	+	ENST00000361297.6@MAST2	ENST00000361297.6	protein_coding	45803613,45824433,45829439,45882364,45959386,45997724,46002805,46006241,46008296,46010730,46019596,46021950,46022910,46023233,46023772,46025677,46027731,46028768,46029466,46029831,46030129,46030607,46031007,46031391,46032178,46032596,46033802,46034073,46034538	45804072,45824580,45829581,45882395,45959477,45997799,46002883,46006395,46008371,46010939,46019697,46022082,46022971,46023318,46023980,46025815,46027863,46028933,46029567,46029953,46030238,46030761,46031290,46031585,46032404,46032718,46033938,46034266,46036124	Gene ID= ENSG00000086015.20 TPM= 75.94 Transcript Type= protein_coding
chr1	45888665	45890260	45888665	45890260	-	transcript3818.chr1.nnic@NA	transcript3818.chr1.nnic	NA	45888665	45890260	Gene ID= novel_gene_chr1_3819 TPM= 3.19 Transcript Type= NA
chr1	45913618	45915722	45913618	45915722	+	transcript3816.chr1.nnic@NA	transcript3816.chr1.nnic	NA	45913618	45915722	Gene ID= novel_gene_chr1_3817 TPM= 2.12 Transcript Type= NA
chr1	45940623	45946556	45940623	45946556	-	transcript3820.chr1.nnic@NA	transcript3820.chr1.nnic	NA	45940623	45946556	Gene ID= novel_gene_chr1_3821 TPM= 2.12 Transcript Type= NA
chr1	46003485	46006232	46003485	46006232	-	transcript3822.chr1.nnic@NA	transcript3822.chr1.nnic	NA	46003485	46006232	Gene ID= novel_gene_chr1_3823 TPM= 2.12 Transcript Type= NA
chr1	46040140	46132642	46040140	46132642	-	ENST00000262741.9@PIK3R3	ENST00000262741.9	protein_coding	46131847,46080642,46077515,46066911,46066054,46061929,46055795,46046551,46045918,46040140	46132642,46080750,46077613,46067091,46066179,46062071,46055971,46046625,46046088,46043871	Gene ID= ENSG00000117461.14 TPM= 61.61 Transcript Type= protein_coding
chr1	46069051	46071711	46069051	46071711	+	transcript3837.chr1.nnic@NA	transcript3837.chr1.nnic	NA	46069051	46071711	Gene ID= novel_gene_chr1_3838 TPM= 9.56 Transcript Type= NA
chr1	46183423	46185958	46183423	46185958	+	transcript3839.chr1.nic@TSPAN1	transcript3839.chr1.nic	protein_coding	46183423,46184191,46184594,46184785,46184960,46185225,46185486	46183683,46184397,46184668,46184883,46185115,46185308,46185958	Gene ID= ENSG00000117472.9 TPM= 2.12 Transcript Type= NA
chr1	46188683	46198486	46188683	46198486	-	transcript3843.chr1.nic@POMGNT1	transcript3843.chr1.nic	protein_coding	46198336,46197702,46196970,46196731,46196012,46195811,46194844,46194553,46194274,46193855,46193564,46193305,46193174,46192900,46192518,46192308,46192098,46190720,46190473,46189854,46189458,46189242,46188683	46198486,46197871,46197084,46196849,46196077,46195924,46194961,46194651,46194401,46193925,46193639,46193388,46193215,46192958,46192590,46192436,46192223,46190784,46190517,46189989,46189567,46189357,46188980	Gene ID= ENSG00000085998.13 TPM= 11.01 Transcript Type= NA
chr1	46188689	46198434	46188689	46198434	-	transcript3846.chr1.nnic@POMGNT1	transcript3846.chr1.nnic	protein_coding	46198336,46197702,46196970,46196731,46196012,46195811,46194844,46194553,46194274,46193855,46193564,46193305,46193174,46192900,46192518,46192308,46192098,46190720,46190473,46189854,46189458,46189180,46188689	46198434,46197871,46197084,46196849,46196077,46195924,46194961,46194651,46194401,46193925,46193639,46193388,46193215,46192958,46192590,46192436,46192223,46190784,46190517,46189989,46189567,46189357,46188980	Gene ID= ENSG00000085998.13 TPM= 3.58 Transcript Type= NA
chr1	46188684	46198486	46188684	46198486	-	transcript3850.chr1.nic@POMGNT1	transcript3850.chr1.nic	protein_coding	46198336,46197702,46196970,46196731,46196012,46195811,46194844,46194553,46194274,46193855,46193564,46193305,46193174,46192900,46192518,46192308,46192098,46190720,46190473,46189854,46189458,46188684	46198486,46197871,46197084,46196849,46196077,46195924,46194961,46194651,46194401,46193925,46193639,46193388,46193215,46192958,46192590,46192436,46192223,46190784,46190517,46189989,46189567,46188980	Gene ID= ENSG00000085998.13 TPM= 8.89 Transcript Type= NA
chr1	46188687	46198434	46188687	46198434	-	transcript3854.chr1.nic@POMGNT1	transcript3854.chr1.nic	protein_coding	46198336,46197702,46196970,46196731,46196012,46195811,46194844,46194553,46194274,46193855,46193564,46193305,46193174,46192900,46192518,46192308,46192098,46190720,46190473,46189854,46188687	46198434,46197871,46197084,46196849,46196077,46195924,46194961,46194651,46194401,46193925,46193639,46193388,46193215,46192958,46192590,46192436,46192223,46190784,46190517,46189989,46189567	Gene ID= ENSG00000085998.13 TPM= 13.67 Transcript Type= NA
chr1	46188683	46198443	46188683	46198443	-	ENST00000371984.7@POMGNT1	ENST00000371984.7	protein_coding	46198336,46197702,46196970,46196731,46196012,46195811,46194844,46194553,46194274,46193855,46193564,46193305,46193174,46192900,46192518,46192308,46192098,46190720,46190473,46189854,46189458,46188683	46198443,46197871,46197084,46196849,46196077,46195924,46194961,46194651,46194401,46193925,46193639,46193388,46193215,46192958,46192590,46192436,46192223,46190784,46190517,46189989,46189567,46189357	Gene ID= ENSG00000085998.13 TPM= 109.26 Transcript Type= protein_coding
chr1	46198495	46221253	46198495	46221253	+	transcript3867.chr1.nnic@LURAP1	transcript3867.chr1.nnic	protein_coding	46198495,46200425,46219699	46198577,46200518,46221253	Gene ID= ENSG00000171357.5 TPM= 2.12 Transcript Type= NA
chr1	46203334	46221261	46203334	46221261	+	ENST00000371980.3@LURAP1	ENST00000371980.3	protein_coding	46203334,46219699	46203624,46221261	Gene ID= ENSG00000171357.5 TPM= 15.93 Transcript Type= protein_coding
chr1	46231326	46234887	46231326	46234887	-	transcript3872.chr1.nnic@NA	transcript3872.chr1.nnic	NA	46231326	46234887	Gene ID= novel_gene_chr1_3873 TPM= 4.25 Transcript Type= NA
chr1	46278403	46303034	46278403	46303034	-	transcript3878.chr1.nnic@LRRC41	transcript3878.chr1.nnic	protein_coding	46302763,46298284,46297563,46285362,46281125,46280396,46280192,46279492,46279182,46278403	46303034,46298370,46297633,46286499,46281385,46280560,46280290,46279614,46279257,46279084	Gene ID= ENSG00000132128.16 TPM= 8.05 Transcript Type= NA
chr1	46277462	46303608	46277462	46303608	-	ENST00000617190.4@LRRC41	ENST00000617190.4	protein_coding	46303124,46298284,46297563,46285362,46281125,46280396,46280192,46279492,46279182,46277462	46303608,46298370,46297633,46286499,46281385,46280560,46280290,46279614,46279257,46279084	Gene ID= ENSG00000132128.16 TPM= 102.05 Transcript Type= protein_coding
chr1	46278403	46303215	46278403	46303215	-	transcript3881.chr1.nnic@LRRC41	transcript3881.chr1.nnic	protein_coding	46303124,46298284,46297563,46281125,46280396,46280192,46279492,46279182,46278403	46303215,46298370,46297633,46281385,46280560,46280290,46279614,46279257,46279084	Gene ID= ENSG00000132128.16 TPM= 9.03 Transcript Type= NA
chr1	46303631	46316776	46303631	46316776	+	ENST00000311672.9@UQCRH	ENST00000311672.9	protein_coding	46303631,46309101,46310155,46316552	46303820,46309127,46310316,46316776	Gene ID= ENSG00000173660.11 TPM= 610.74 Transcript Type= protein_coding
chr1	46303709	46316776	46303709	46316776	+	ENST00000496387.5@UQCRH	ENST00000496387.5	protein_coding	46303709,46309101,46309897,46310155,46316552	46303820,46309127,46310044,46310316,46316776	Gene ID= ENSG00000173660.11 TPM= 63.73 Transcript Type= nonsense_mediated_decay
chr1	46303698	46316776	46303698	46316776	+	ENST00000489056.5@UQCRH	ENST00000489056.5	protein_coding	46303698,46309101,46310155,46316552	46303820,46309143,46310316,46316776	Gene ID= ENSG00000173660.11 TPM= 15.93 Transcript Type= nonsense_mediated_decay
chr1	46303731	46305319	46303731	46305319	+	transcript3897.chr1.nnic@NA	transcript3897.chr1.nnic	NA	46303731	46305319	Gene ID= novel_gene_chr1_3898 TPM= 4.25 Transcript Type= NA
chr1	46340177	46362191	46340177	46362191	+	ENST00000474844.5@NSUN4	ENST00000474844.5	protein_coding	46340177,46344801,46346921,46352868,46360704,46361570	46340919,46345144,46347075,46353028,46360828,46362191	Gene ID= ENSG00000117481.10 TPM= 7.44 Transcript Type= protein_coding
chr1	46394265	46413845	46394265	46413845	+	ENST00000243167.8@FAAH	ENST00000243167.8	protein_coding	46394265,46402091,46405014,46405372,46405588,46406038,46406244,46408459,46409101,46410398,46410814,46411612,46412143,46413075,46413447	46394543,46402204,46405148,46405505,46405794,46406078,46406368,46408584,46409198,46410497,46410854,46411651,46412251,46413220,46413845	Gene ID= ENSG00000117480.15 TPM= 1.06 Transcript Type= protein_coding
chr1	46557408	46604260	46557408	46604260	-	transcript3914.chr1.nic@MKNK1	transcript3914.chr1.nic	protein_coding	46604227,46594113,46585874,46583228,46580530,46576575,46574947,46572063,46568443,46565041,46562649,46561478,46557408	46604260,46594280,46585974,46583329,46580627,46576654,46575020,46572167,46568498,46565136,46562843,46561642,46558800	Gene ID= ENSG00000079277.19 TPM= 4.78 Transcript Type= NA
chr1	46557408	46604259	46557408	46604259	-	transcript3916.chr1.nic@MKNK1	transcript3916.chr1.nic	protein_coding	46604185,46594113,46583228,46580530,46576575,46574947,46572063,46568443,46565041,46562649,46561478,46557408	46604259,46594280,46583329,46580627,46576654,46575020,46572167,46568498,46565136,46562843,46561642,46558800	Gene ID= ENSG00000079277.19 TPM= 6.9 Transcript Type= NA
chr1	46557419	46604237	46557419	46604237	-	ENST00000371945.8@MKNK1	ENST00000371945.8	protein_coding	46604185,46594113,46583228,46580530,46576575,46574947,46572063,46568443,46565041,46562649,46561478,46560234,46557419	46604237,46594280,46583329,46580627,46576654,46575020,46572167,46568498,46565136,46562843,46561642,46560277,46558800	Gene ID= ENSG00000079277.19 TPM= 7.44 Transcript Type= protein_coding
chr1	46607715	46616891	46607715	46616891	-	ENST00000319928.7@MOB3C	ENST00000319928.7	protein_coding	46616711,46612904,46610002,46607715	46616891,46613371,46610204,46609684	Gene ID= ENSG00000142961.14 TPM= 31.86 Transcript Type= protein_coding
chr1	46635045	46668364	46635045	46668364	-	ENST00000574428.5@ATPAF1	ENST00000574428.5	protein_coding	46668057,46665256,46658687,46658127,46653817,46652581,46645161,46643194,46635045	46668364,46665364,46658737,46658189,46653867,46652628,46645256,46643301,46635970	Gene ID= ENSG00000123472.12 TPM= 734.08 Transcript Type= protein_coding
chr1	46675159	46719149	46675159	46719149	-	transcript3959.chr1.nic@EFCAB14	transcript3959.chr1.nic	protein_coding	46717903,46716295,46707906,46696551,46691827,46689587,46686784,46684491,46683300,46675159	46719149,46716443,46708051,46696649,46691937,46689691,46686870,46684602,46683425,46678636	Gene ID= ENSG00000159658.10 TPM= 3.19 Transcript Type= NA
chr1	46686789	46718727	46686789	46718727	-	transcript3963.chr1.nic@EFCAB14	transcript3963.chr1.nic	protein_coding	46717903,46716295,46707906,46696551,46691827,46689587,46688353,46686789	46718727,46716443,46708051,46696649,46691937,46689691,46688544,46686870	Gene ID= ENSG00000159658.10 TPM= 2.12 Transcript Type= NA
chr1	46675159	46719064	46675159	46719064	-	ENST00000371933.7@EFCAB14	ENST00000371933.7	protein_coding	46717903,46716295,46707906,46696551,46691827,46689587,46688353,46686784,46684491,46683300,46675159	46719064,46716443,46708051,46696649,46691937,46689691,46688544,46686870,46684602,46683425,46678636	Gene ID= ENSG00000159658.10 TPM= 24.43 Transcript Type= protein_coding
chr1	47023568	47050751	47023568	47050751	+	ENST00000371901.3@CYP4X1	ENST00000371901.3	protein_coding	47023568,47029990,47031436,47033241,47035806,47036017,47038660,47039342,47046467,47048565,47049422,47050000	47023994,47030131,47031480,47033368,47035933,47036171,47038766,47039532,47046600,47048629,47049504,47050751	Gene ID= ENSG00000186377.7 TPM= 2.12 Transcript Type= protein_coding
chr1	47333797	47378839	47333797	47378839	+	ENST00000371873.9@CMPK1	ENST00000371873.9	protein_coding	47333797,47368469,47372955,47374909,47375197,47376704	47334116,47368615,47373107,47374985,47375293,47378839	Gene ID= ENSG00000162368.13 TPM= 150.83 Transcript Type= protein_coding
chr1	48295372	48472173	48295372	48472173	-	ENST00000371847.7@SPATA6	ENST00000371847.7	protein_coding	48471958,48452994,48451552,48413110,48411464,48403802,48399351,48395267,48385309,48359586,48355670,48305787,48295372	48472173,48453131,48451600,48413151,48411588,48403882,48399644,48395354,48385349,48359770,48355769,48305878,48298893	Gene ID= ENSG00000132122.11 TPM= 1.06 Transcript Type= protein_coding
chr1	48727523	48776918	48727523	48776918	-	ENST00000371833.3@BEND5	ENST00000371833.3	protein_coding	48776606,48761337,48758900,48742623,48736239,48727523	48776918,48761470,48759284,48742771,48736452,48728043	Gene ID= ENSG00000162373.12 TPM= 1.06 Transcript Type= protein_coding
chr1	50174306	50175868	50174306	50175868	-	ENST00000442477.1@AL592182.2	ENST00000442477.1	antisense_RNA	50175446,50174306	50175868,50174740	Gene ID= ENSG00000237337.1 TPM= 1.06 Transcript Type= antisense_RNA
chr1	50417550	50423500	50417550	50423500	-	ENST00000404795.3@DMRTA2	ENST00000404795.3	protein_coding	50423116,50420978,50417550	50423500,50421544,50419734	Gene ID= ENSG00000142700.11 TPM= 1.06 Transcript Type= protein_coding
chr1	50474434	50960290	50474434	50960290	-	transcript3993.chr1.nic@FAF1	transcript3993.chr1.nic	protein_coding	50959767,50857929,50801631,50788000,50744684,50738863,50705786,50655442,50596121,50584685,50583652,50582618,50567077,50539592,50535369,50491721,50490588,50474434	50960290,50857997,50801677,50788205,50744775,50738954,50705891,50655528,50596216,50584811,50583715,50582699,50567231,50539728,50535457,50491801,50490665,50475679	Gene ID= ENSG00000185104.19 TPM= 9.56 Transcript Type= NA
chr1	50439438	50441381	50439438	50441381	-	transcript4000.chr1.nnic@NA	transcript4000.chr1.nnic	NA	50439438	50441381	Gene ID= novel_gene_chr1_4001 TPM= 2.12 Transcript Type= NA
chr1	50928385	50928800	50928385	50928800	+	transcript3998.chr1.nnic@NA	transcript3998.chr1.nnic	NA	50928385	50928800	Gene ID= novel_gene_chr1_3999 TPM= 3.19 Transcript Type= NA
chr1	50960745	50974633	50960745	50974633	+	ENST00000262662.5@CDKN2C	ENST00000262662.5	protein_coding	50960745,50967936,50970358,50973893	50960803,50969899,50970497,50974633	Gene ID= ENSG00000123080.10 TPM= 8.5 Transcript Type= protein_coding
chr1	51236301	51273256	51236301	51273256	+	transcript4012.chr1.nnic@RNF11	transcript4012.chr1.nnic	protein_coding	51236301,51236504,51269956,51271151	51236456,51236879,51270125,51273256	Gene ID= ENSG00000123091.4 TPM= 24.96 Transcript Type= NA
chr1	51236271	51273455	51236271	51273455	+	ENST00000242719.3@RNF11	ENST00000242719.3	protein_coding	51236271,51269956,51271151	51236879,51270125,51273455	Gene ID= ENSG00000123091.4 TPM= 30.27 Transcript Type= protein_coding
chr1	51287258	51330771	51287258	51330771	-	transcript4027.chr1.nic@TTC39A	transcript4027.chr1.nic	protein_coding	51330437,51321721,51312812,51312119,51311254,51309261,51305977,51305081,51303084,51302506,51302357,51301572,51296079,51294391,51290514,51290005,51288839,51287258	51330771,51321825,51312943,51312195,51311321,51309325,51306076,51305146,51303192,51302573,51302416,51301733,51296170,51294511,51290625,51290119,51288955,51288280	Gene ID= ENSG00000085831.15 TPM= 9.21 Transcript Type= NA
chr1	51287258	51331284	51287258	51331284	-	transcript4028.chr1.nic@TTC39A	transcript4028.chr1.nic	protein_coding	51331154,51321721,51312812,51312119,51311254,51309261,51305977,51305081,51303084,51302506,51302357,51301572,51296079,51294391,51290514,51290005,51288839,51287258	51331284,51321825,51312943,51312195,51311321,51309325,51306076,51305146,51303192,51302573,51302416,51301733,51296170,51294511,51290625,51290119,51288955,51288280	Gene ID= ENSG00000085831.15 TPM= 3.9 Transcript Type= NA
chr1	51287258	51330696	51287258	51330696	-	transcript4031.chr1.nic@TTC39A	transcript4031.chr1.nic	protein_coding	51330437,51321721,51312812,51312119,51311254,51309261,51305977,51305081,51303084,51302506,51302357,51301572,51296079,51294391,51290514,51290005,51288839,51287258	51330696,51321825,51312943,51312195,51311321,51309430,51306076,51305146,51303192,51302573,51302416,51301733,51296170,51294511,51290625,51290119,51288955,51288280	Gene ID= ENSG00000085831.15 TPM= 3.9 Transcript Type= NA
chr1	51302357	51330564	51302357	51330564	-	ENST00000439482.5@TTC39A	ENST00000439482.5	protein_coding	51330437,51321721,51312812,51312119,51311254,51309261,51305977,51305081,51303084,51302506,51302357	51330564,51321825,51312943,51312195,51311321,51309325,51306076,51305146,51303192,51302573,51302416	Gene ID= ENSG00000085831.15 TPM= 1.06 Transcript Type= protein_coding
chr1	51355237	51422101	51355237	51422101	-	transcript4050.chr1.nic@EPS15	transcript4050.chr1.nic	protein_coding	51421786,51409535,51408135,51405905,51403419,51402435,51400918,51399032,51394381,51365953,51363866,51361171,51355237	51422101,51409696,51408332,51406108,51403532,51402525,51400953,51399165,51394447,51366029,51364028,51361355,51356846	Gene ID= ENSG00000085832.16 TPM= 8.5 Transcript Type= NA
chr1	51577179	51788469	51577179	51788469	+	ENST00000371714.5@OSBPL9	ENST00000371714.5	protein_coding	51577179,51598124,51614305,51616874,51651991,51669434,51714003,51745536,51746710,51748369,51750145,51760690,51761867,51765822,51772070,51772605,51776833,51781164,51782559,51783915,51784264,51784442,51785808,51786526,51787353,51787715	51577256,51598193,51614419,51617221,51652041,51669512,51714079,51745631,51746757,51748398,51750195,51760780,51761971,51765981,51772182,51772723,51776918,51781335,51782643,51784025,51784327,51784582,51785886,51786617,51787488,51788469	Gene ID= ENSG00000117859.18 TPM= 4.86 Transcript Type= protein_coding
chr1	51729857	51788395	51729857	51788395	+	transcript4074.chr1.nic@OSBPL9	transcript4074.chr1.nic	protein_coding	51729857,51745536,51746710,51748369,51750145,51756320,51760690,51761867,51765822,51772070,51772605,51776833,51781164,51782559,51783915,51784264,51784442,51785808,51786526,51787353,51787715	51730001,51745631,51746757,51748398,51750195,51756358,51760780,51761971,51765981,51772182,51772723,51776918,51781335,51782643,51784025,51784327,51784582,51785886,51786617,51787488,51788395	Gene ID= ENSG00000117859.18 TPM= 4.51 Transcript Type= NA
chr1	51617109	51788469	51617109	51788469	+	ENST00000428468.5@OSBPL9	ENST00000428468.5	protein_coding	51617109,51651991,51669434,51714003,51745536,51746710,51748369,51750145,51756320,51760690,51761867,51765822,51772070,51772605,51776833,51781164,51782559,51783915,51784264,51784442,51785808,51786526,51787353,51787715	51617221,51652041,51669512,51714079,51745631,51746757,51748398,51750195,51756358,51760780,51761971,51765981,51772182,51772723,51776918,51781335,51782643,51784025,51784327,51784582,51785886,51786617,51787488,51788469	Gene ID= ENSG00000117859.18 TPM= 2.74 Transcript Type= protein_coding
chr1	51729815	51788469	51729815	51788469	+	ENST00000361556.9@OSBPL9	ENST00000361556.9	protein_coding	51729815,51745536,51746710,51748369,51750145,51760690,51761867,51765822,51772070,51772605,51776833,51781164,51782559,51783915,51784264,51784442,51785808,51786526,51787353,51787715	51730001,51745631,51746757,51748398,51750195,51760780,51761971,51765981,51772182,51772723,51776918,51781335,51782643,51784025,51784327,51784582,51785886,51786617,51787488,51788469	Gene ID= ENSG00000117859.18 TPM= 3.8 Transcript Type= protein_coding
chr1	51776762	51778724	51776762	51778724	-	transcript4097.chr1.nnic@NA	transcript4097.chr1.nnic	NA	51776762	51778724	Gene ID= novel_gene_chr1_4098 TPM= 3.19 Transcript Type= NA
chr1	51789191	51878805	51789191	51878805	-	ENST00000354831.11@NRDC	ENST00000354831.11	protein_coding	51878275,51840226,51837487,51836369,51836131,51834017,51827796,51825287,51823664,51821498,51819800,51818066,51816312,51814693,51814551,51814035,51811994,51810281,51809315,51806794,51805510,51803814,51800556,51798249,51794823,51794472,51792377,51792046,51791578,51790900,51790533,51789568,51789191	51878805,51840514,51837620,51836438,51836212,51834170,51827869,51825382,51823786,51821555,51819873,51818135,51816389,51814813,51814609,51814089,51812098,51810404,51809401,51806913,51805561,51803964,51800683,51798411,51794854,51794610,51792424,51792098,51791661,51790990,51790649,51789657,51789433	Gene ID= ENSG00000078618.21 TPM= 36.11 Transcript Type= protein_coding
chr1	51789191	51878805	51789191	51878805	-	ENST00000352171.11@NRDC	ENST00000352171.11	protein_coding	51878275,51840226,51836131,51834017,51827796,51825287,51823664,51821498,51819800,51818066,51816312,51814693,51814551,51814035,51811994,51810281,51809315,51806794,51805510,51803814,51800556,51798249,51794823,51794472,51792377,51792046,51791578,51790900,51790533,51789568,51789191	51878805,51840514,51836212,51834170,51827869,51825382,51823786,51821555,51819873,51818135,51816389,51814813,51814609,51814089,51812098,51810404,51809401,51806913,51805561,51803964,51800683,51798411,51794854,51794610,51792424,51792098,51791661,51790990,51790649,51789657,51789433	Gene ID= ENSG00000078618.21 TPM= 110.82 Transcript Type= protein_coding
chr1	52020131	52056171	52020131	52056171	-	ENST00000371626.8@TXNDC12	ENST00000371626.8	protein_coding	52055000,52041537,52028578,52027275,52024510,52023491,52020131	52056171,52041597,52028630,52027348,52024579,52023574,52021012	Gene ID= ENSG00000117862.11 TPM= 48.86 Transcript Type= protein_coding
chr1	52032103	52033816	52032103	52033816	-	ENST00000371614.1@KTI12	ENST00000371614.1	protein_coding	52032103	52033816	Gene ID= ENSG00000198841.3 TPM= 5.31 Transcript Type= protein_coding
chr1	52056125	52090716	52056125	52090716	+	ENST00000313334.12@BTF3L4	ENST00000313334.12	protein_coding	52056125,52059835,52064825,52083340,52086112,52086712	52056379,52059901,52064938,52083541,52086171,52090716	Gene ID= ENSG00000134717.17 TPM= 6.37 Transcript Type= protein_coding
chr1	52056304	52088418	52056304	52088418	+	ENST00000472944.6@BTF3L4	ENST00000472944.6	protein_coding	52056304,52064825,52083340,52086112,52086712	52056379,52064938,52083541,52086171,52088418	Gene ID= ENSG00000134717.17 TPM= 13.81 Transcript Type= protein_coding
chr1	52056271	52087155	52056271	52087155	+	ENST00000489308.6@BTF3L4	ENST00000489308.6	protein_coding	52056271,52059835,52064825,52086112,52086712	52056379,52059901,52064938,52086171,52087155	Gene ID= ENSG00000134717.17 TPM= 1.06 Transcript Type= protein_coding
chr1	52352532	52366179	52352532	52366179	-	ENST00000284376.7@CC2D1B	ENST00000284376.7	protein_coding	52366069,52364552,52362602,52361513,52360974,52360424,52360074,52359705,52359459,52359250,52359027,52358686,52358331,52357781,52357526,52357001,52356384,52356186,52355771,52355608,52355398,52354840,52354608,52353518,52352532	52366179,52364634,52362746,52361616,52361132,52360549,52360233,52359883,52359534,52359357,52359157,52358758,52358461,52357898,52357698,52357126,52356442,52356302,52355844,52355666,52355449,52354939,52354698,52353647,52353223	Gene ID= ENSG00000154222.14 TPM= 22.31 Transcript Type= protein_coding
chr1	52404564	52420839	52404564	52420839	+	ENST00000257181.9@PRPF38A	ENST00000257181.9	protein_coding	52404564,52405680,52408569,52411115,52412514,52413879,52414621,52414762,52415338,52416648	52404879,52405839,52408690,52411200,52412624,52413991,52414647,52414859,52415386,52420839	Gene ID= ENSG00000134748.12 TPM= 9.56 Transcript Type= protein_coding
chr1	52423275	52553100	52423275	52553100	-	ENST00000371544.7@ZCCHC11	ENST00000371544.7	protein_coding	52552931,52525563,52515891,52509596,52497006,52495427,52493611,52490732,52488909,52481804,52481423,52477708,52474832,52471952,52468181,52465070,52461712,52461513,52461134,52458336,52446590,52446265,52445957,52445787,52438220,52436755,52435365,52431013,52425349,52423275	52553100,52526373,52516054,52509712,52497183,52495515,52493662,52490801,52489035,52481923,52481635,52477882,52475535,52472102,52468267,52465173,52461769,52461616,52461223,52458449,52446667,52446442,52446004,52445869,52438335,52436975,52435465,52431460,52425507,52424002	Gene ID= ENSG00000134744.13 TPM= 3.19 Transcript Type= protein_coding
chr1	52602372	52609051	52602372	52609051	+	ENST00000361314.4@GPX7	ENST00000361314.4	protein_coding	52602372,52606684,52608262	52602547,52606945,52609051	Gene ID= ENSG00000116157.5 TPM= 11.68 Transcript Type= protein_coding
chr1	52684451	52698366	52684451	52698366	-	ENST00000371538.4@COA7	ENST00000371538.4	protein_coding	52698221,52692727,52684451	52698366,52692867,52688168	Gene ID= ENSG00000162377.5 TPM= 5.31 Transcript Type= protein_coding
chr1	52726509	52827342	52726509	52827342	+	ENST00000294353.6@ZYG11B	ENST00000294353.6	protein_coding	52726509,52756458,52771020,52779853,52784877,52790003,52796292,52796734,52801819,52802092,52813536,52813860,52816532,52821439	52726683,52756623,52771774,52779993,52785053,52790067,52796391,52796784,52801980,52802139,52813733,52813912,52816629,52827342	Gene ID= ENSG00000162378.12 TPM= 22.31 Transcript Type= protein_coding
chr1	52896232	52921758	52896232	52921758	-	transcript4156.chr1.nic@ECHDC2	transcript4156.chr1.nic	protein_coding	52921553,52913895,52911723,52911566,52907868,52906519,52905034,52904646,52899174,52897437,52896232	52921758,52914095,52911790,52911653,52907954,52906611,52905090,52904833,52899224,52897484,52896597	Gene ID= ENSG00000121310.16 TPM= 3.45 Transcript Type= NA
chr1	52896232	52921758	52896232	52921758	-	transcript4157.chr1.nic@ECHDC2	transcript4157.chr1.nic	protein_coding	52921553,52913895,52911723,52911566,52907868,52906519,52905034,52904646,52899174,52897437,52896232	52921758,52914095,52912021,52911653,52907954,52906611,52905090,52904833,52899224,52897484,52896597	Gene ID= ENSG00000121310.16 TPM= 2.39 Transcript Type= NA
chr1	52896232	52921758	52896232	52921758	-	transcript4164.chr1.nic@ECHDC2	transcript4164.chr1.nic	protein_coding	52921553,52913895,52911723,52911566,52907868,52905034,52904646,52899174,52897437,52896232	52921758,52914095,52911790,52911653,52907954,52905090,52904833,52899224,52897484,52896597	Gene ID= ENSG00000121310.16 TPM= 2.39 Transcript Type= NA
chr1	52896223	52921732	52896223	52921732	-	transcript4171.chr1.nic@ECHDC2	transcript4171.chr1.nic	protein_coding	52921553,52911723,52911566,52907868,52906519,52905034,52904646,52899174,52896223	52921732,52911790,52911653,52907954,52906611,52905090,52904833,52899224,52896597	Gene ID= ENSG00000121310.16 TPM= 2.39 Transcript Type= NA
chr1	52896232	52921705	52896232	52921705	-	transcript4174.chr1.nic@ECHDC2	transcript4174.chr1.nic	protein_coding	52921553,52913895,52911723,52911566,52907868,52904646,52899174,52897437,52896232	52921705,52914095,52912021,52911653,52907954,52904833,52899224,52897484,52896597	Gene ID= ENSG00000121310.16 TPM= 2.39 Transcript Type= NA
chr1	52896232	52921749	52896232	52921749	-	transcript4178.chr1.nic@ECHDC2	transcript4178.chr1.nic	protein_coding	52921553,52911723,52911566,52907868,52904646,52899174,52897437,52896232	52921749,52911790,52911653,52907954,52904833,52899224,52897484,52896597	Gene ID= ENSG00000121310.16 TPM= 4.51 Transcript Type= NA
chr1	52896223	52921726	52896223	52921726	-	transcript4180.chr1.nic@ECHDC2	transcript4180.chr1.nic	protein_coding	52921553,52911723,52911566,52907868,52904646,52899174,52896223	52921726,52911790,52911653,52907954,52904833,52899224,52896597	Gene ID= ENSG00000121310.16 TPM= 3.45 Transcript Type= NA
chr1	52896232	52907036	52896232	52907036	-	transcript4186.chr1.nic@ECHDC2	transcript4186.chr1.nic	protein_coding	52905034,52904646,52899174,52897437,52896232	52907036,52904833,52899224,52897484,52896597	Gene ID= ENSG00000121310.16 TPM= 4.25 Transcript Type= NA
chr1	52896233	52921726	52896233	52921726	-	ENST00000358358.9@ECHDC2	ENST00000358358.9	protein_coding	52921553,52911723,52911566,52907868,52905034,52904646,52899174,52897437,52896233	52921726,52911790,52911653,52907954,52905090,52904833,52899224,52897484,52896597	Gene ID= ENSG00000121310.16 TPM= 14.07 Transcript Type= protein_coding
chr1	52927229	53051703	52927229	53051703	+	ENST00000371514.7@SCP2	ENST00000371514.7	protein_coding	52927229,52941796,52948009,52950755,52954740,52961503,52974769,52976683,52978217,52980396,52988029,53014890,53027969,53038917,53047858,53050609	52927465,52941853,52948080,52950886,52954804,52961629,52974832,52976769,52978367,52980543,52988136,53015043,53028071,53039046,53047937,53051703	Gene ID= ENSG00000116171.17 TPM= 9.56 Transcript Type= protein_coding
chr1	53062213	53085502	53062213	53085502	+	ENST00000312553.9@PODN	ENST00000312553.9	protein_coding	53062213,53069801,53071535,53074606,53075862,53077190,53077685,53078365,53080728,53081981,53084513	53062308,53070167,53071628,53074670,53075971,53077346,53077800,53079022,53080876,53082188,53085502	Gene ID= ENSG00000174348.13 TPM= 24.43 Transcript Type= protein_coding
chr1	53085923	53088719	53085923	53088719	+	transcript4207.chr1.nnic@NA	transcript4207.chr1.nnic	NA	53085923	53088719	Gene ID= novel_gene_chr1_4208 TPM= 4.25 Transcript Type= NA
chr1	53196429	53214197	53196429	53214197	+	ENST00000371486.3@CPT2	ENST00000371486.3	protein_coding	53196429,53200719,53202323,53210015,53213264	53197095,53200799,53202429,53211319,53214197	Gene ID= ENSG00000157184.6 TPM= 38.24 Transcript Type= protein_coding
chr1	53196800	53214160	53196800	53214160	+	ENST00000636239.1@CPT2	ENST00000636239.1	protein_coding	53196800,53200719,53210015,53213264	53197095,53200799,53211319,53214160	Gene ID= ENSG00000157184.6 TPM= 1.06 Transcript Type= nonsense_mediated_decay
chr1	53196792	53214178	53196792	53214178	+	ENST00000636867.1@CPT2	ENST00000636867.1	protein_coding	53196792,53200719,53202323,53210015,53213264	53197095,53200799,53202429,53211250,53214178	Gene ID= ENSG00000157184.6 TPM= 6.37 Transcript Type= protein_coding
chr1	53214099	53220650	53214099	53220650	-	transcript4213.chr1.nnic@C1orf123	transcript4213.chr1.nnic	protein_coding	53220570,53220261,53218414,53218172,53216782,53215991,53214099	53220650,53220344,53218495,53218203,53216859,53216056,53214736	Gene ID= ENSG00000162384.13 TPM= 2.66 Transcript Type= NA
chr1	53214099	53220617	53214099	53220617	-	ENST00000294360.4@C1orf123	ENST00000294360.4	protein_coding	53220570,53220261,53218867,53218414,53218172,53216782,53215991,53214099	53220617,53220344,53218923,53218495,53218203,53216859,53216056,53214736	Gene ID= ENSG00000162384.13 TPM= 27.09 Transcript Type= protein_coding
chr1	53226892	53238610	53226892	53238610	-	ENST00000371470.7@MAGOH	ENST00000371470.7	protein_coding	53238361,53235577,53233542,53228872,53226892	53238610,53235635,53233652,53228954,53227144	Gene ID= ENSG00000162385.10 TPM= 11.68 Transcript Type= protein_coding
chr1	53765460	53838860	53765460	53838860	-	ENST00000371429.3@NDC1	ENST00000371429.3	protein_coding	53838205,53835500,53832490,53827999,53825798,53818971,53809695,53807656,53806425,53803928,53800693,53796899,53796689,53793229,53789133,53787158,53772329,53765460	53838860,53835620,53832591,53828173,53825936,53819079,53809746,53807791,53806517,53804009,53800848,53797144,53796804,53793279,53789196,53787258,53772489,53768033	Gene ID= ENSG00000058804.11 TPM= 2.12 Transcript Type= protein_coding
chr1	53851719	53889817	53851719	53889817	-	transcript4231.chr1.nic@YIPF1	transcript4231.chr1.nic	protein_coding	53889713,53889244,53888907,53883113,53878642,53878315,53871372,53866758,53866200,53860056,53855001,53851719	53889817,53889463,53888986,53883276,53878722,53878402,53871488,53866924,53866382,53860153,53855051,53852270	Gene ID= ENSG00000058799.14 TPM= 11.42 Transcript Type= NA
chr1	53851719	53889817	53851719	53889817	-	transcript4234.chr1.nic@YIPF1	transcript4234.chr1.nic	protein_coding	53889713,53889244,53888907,53878642,53878315,53871372,53866758,53866200,53860056,53855001,53851719	53889817,53889463,53888986,53878722,53878402,53871488,53866924,53866382,53860153,53855051,53852270	Gene ID= ENSG00000058799.14 TPM= 3.98 Transcript Type= NA
chr1	53851733	53889834	53851733	53889834	-	ENST00000072644.6@YIPF1	ENST00000072644.6	protein_coding	53889713,53889244,53888907,53883113,53878642,53878315,53871372,53866758,53866200,53860056,53851733	53889834,53889463,53888986,53883276,53878722,53878402,53871488,53866924,53866382,53860153,53852270	Gene ID= ENSG00000058799.14 TPM= 2.92 Transcript Type= protein_coding
chr1	53851719	53889833	53851719	53889833	-	transcript4239.chr1.nic@YIPF1	transcript4239.chr1.nic	protein_coding	53889713,53888907,53878642,53878315,53871372,53866758,53866200,53860056,53855001,53851719	53889833,53888986,53878722,53878402,53871488,53866924,53866382,53860153,53855051,53852270	Gene ID= ENSG00000058799.14 TPM= 2.66 Transcript Type= NA
chr1	53851733	53889833	53851733	53889833	-	transcript4240.chr1.nic@YIPF1	transcript4240.chr1.nic	protein_coding	53889713,53888907,53883113,53878642,53878315,53871372,53866758,53866200,53860056,53851733	53889833,53888986,53883276,53878722,53878402,53871488,53866924,53866382,53860153,53852270	Gene ID= ENSG00000058799.14 TPM= 4.78 Transcript Type= NA
chr1	53851719	53889733	53851719	53889733	-	ENST00000464950.6@YIPF1	ENST00000464950.6	protein_coding	53889713,53888907,53883113,53878642,53878315,53871372,53866758,53866200,53860056,53855001,53851719	53889733,53888986,53883276,53878722,53878402,53871488,53866924,53866382,53860153,53855051,53852270	Gene ID= ENSG00000058799.14 TPM= 7.97 Transcript Type= nonsense_mediated_decay
chr1	53921561	53945929	53921561	53945929	-	ENST00000194214.9@HSPB11	ENST00000194214.9	protein_coding	53945555,53939985,53930039,53928372,53923904,53921561	53945929,53940097,53930145,53928440,53923947,53921767	Gene ID= ENSG00000081870.11 TPM= 15.4 Transcript Type= protein_coding
chr1	53921561	53946282	53921561	53946282	-	transcript4244.chr1.nnic@HSPB11	transcript4244.chr1.nnic	protein_coding	53946237,53939985,53930039,53928372,53923904,53921561	53946282,53940097,53930145,53928440,53923947,53921767	Gene ID= ENSG00000081870.11 TPM= 2.66 Transcript Type= NA
chr1	53946077	53968168	53946077	53968168	+	ENST00000371370.7@LRRC42	ENST00000371370.7	protein_coding	53946077,53947788,53951986,53958149,53960356,53962034,53962296,53966296,53967665	53946549,53947821,53952472,53958280,53960474,53962122,53962409,53966380,53968168	Gene ID= ENSG00000116212.14 TPM= 15.4 Transcript Type= protein_coding
chr1	53946353	53968168	53946353	53968168	+	ENST00000319223.8@LRRC42	ENST00000319223.8	protein_coding	53946353,53951986,53958149,53960356,53962034,53962296,53966296,53967665	53946549,53952472,53958280,53960474,53962122,53962409,53966380,53968168	Gene ID= ENSG00000116212.14 TPM= 19.65 Transcript Type= protein_coding
chr1	54026681	54053438	54026681	54053438	-	ENST00000234831.9@TMEM59	ENST00000234831.9	protein_coding	54053000,54047267,54045692,54043373,54041724,54040756,54036610,54026681	54053438,54047372,54045786,54043525,54041805,54040837,54036718,54032305	Gene ID= ENSG00000116209.11 TPM= 3.19 Transcript Type= protein_coding
chr1	54031966	54053504	54031966	54053504	-	ENST00000371341.5@TMEM59	ENST00000371341.5	protein_coding	54053356,54047267,54045692,54043373,54041724,54040756,54036610,54031966	54053504,54047372,54045786,54043525,54041805,54040837,54036718,54032305	Gene ID= ENSG00000116209.11 TPM= 14.34 Transcript Type= protein_coding
chr1	54200167	54218383	54200167	54218383	+	ENST00000360840.9@MRPL37	ENST00000360840.9	protein_coding	54200167,54205018,54205295,54209946,54212501,54216141,54218172	54200589,54205201,54205410,54210131,54212658,54216344,54218383	Gene ID= ENSG00000116221.15 TPM= 132.77 Transcript Type= protein_coding
chr1	54223442	54225479	54223442	54225479	+	transcript4277.chr1.nnic@NA	transcript4277.chr1.nnic	NA	54223442	54225479	Gene ID= novel_gene_chr1_4278 TPM= 3.19 Transcript Type= NA
chr1	54226639	54406008	54226639	54406008	-	ENST00000371319.7@SSBP3	ENST00000371319.7	protein_coding	54405953,54404858,54404576,54401861,54281438,54257127,54251794,54251616,54243235,54242164,54241474,54240905,54239129,54228748,54228449,54228255,54226639	54406008,54404930,54404637,54401945,54281527,54257186,54251860,54251692,54243299,54242212,54241509,54240959,54239199,54228826,54228477,54228356,54227160	Gene ID= ENSG00000157216.15 TPM= 9.56 Transcript Type= protein_coding
chr1	54271782	54273596	54271782	54273596	-	transcript4279.chr1.nnic@NA	transcript4279.chr1.nnic	NA	54271782	54273596	Gene ID= novel_gene_chr1_4280 TPM= 2.12 Transcript Type= NA
chr1	54389891	54394265	54389891	54394265	-	transcript4281.chr1.nnic@NA	transcript4281.chr1.nnic	NA	54389891	54394265	Gene ID= novel_gene_chr1_4282 TPM= 2.12 Transcript Type= NA
chr1	54548228	54610327	54548228	54610327	+	ENST00000343744.6@ACOT11	ENST00000343744.6	protein_coding	54548228,54584655,54585835,54592546,54593941,54594556,54597259,54599296,54601269,54602669,54603871,54604346,54605076,54607134,54607942,54608957	54548342,54584862,54585904,54592606,54594039,54594691,54597415,54599415,54601413,54602724,54603937,54604429,54605209,54607265,54608068,54610327	Gene ID= ENSG00000162390.17 TPM= 36.11 Transcript Type= protein_coding
chr1	54593459	54600654	54593459	54600654	+	transcript4294.chr1.nic@ACOT11	transcript4294.chr1.nic	protein_coding	54593459,54594556,54597259,54599296	54594039,54594691,54597415,54600654	Gene ID= ENSG00000162390.17 TPM= 2.12 Transcript Type= NA
chr1	54593459	54596272	54593459	54596272	+	transcript4295.chr1.nic@ACOT11	transcript4295.chr1.nic	protein_coding	54593459,54594556	54594039,54596272	Gene ID= ENSG00000162390.17 TPM= 3.19 Transcript Type= NA
chr1	54586734	54587300	54586734	54587300	-	transcript4296.chr1.nnic@NA	transcript4296.chr1.nnic	NA	54586734	54587300	Gene ID= novel_gene_chr1_4297 TPM= 2.12 Transcript Type= NA
chr1	54645657	54647435	54645657	54647435	-	transcript4298.chr1.nnic@NA	transcript4298.chr1.nnic	NA	54645657	54647435	Gene ID= novel_gene_chr1_4299 TPM= 10.62 Transcript Type= NA
chr1	54715822	54742657	54715822	54742657	+	ENST00000371281.3@TTC4	ENST00000371281.3	protein_coding	54715822,54716600,54717492,54721163,54722675,54728346,54731486,54733629,54737582,54741411	54716019,54716717,54717653,54721240,54722799,54728432,54731700,54733710,54737664,54742657	Gene ID= ENSG00000243725.6 TPM= 8.5 Transcript Type= protein_coding
chr1	54715852	54742308	54715852	54742308	+	transcript4308.chr1.nnic@TTC4	transcript4308.chr1.nnic	protein_coding	54715852,54716600,54717492,54721163,54722675,54731486,54733629,54737582,54741411	54716019,54716717,54717653,54721240,54722799,54731700,54733710,54737664,54742308	Gene ID= ENSG00000243725.6 TPM= 2.12 Transcript Type= NA
chr1	54756898	54764514	54756898	54764514	-	ENST00000371279.3@PARS2	ENST00000371279.3	protein_coding	54764461,54756898	54764514,54759190	Gene ID= ENSG00000162396.5 TPM= 7.44 Transcript Type= protein_coding
chr1	54849633	54887218	54849633	54887218	-	ENST00000371269.7@DHCR24	ENST00000371269.7	protein_coding	54886889,54883618,54875942,54875093,54871350,54865303,54854037,54853434,54849633	54887218,54883773,54876047,54875211,54871613,54865446,54854234,54853612,54852386	Gene ID= ENSG00000116133.11 TPM= 70.1 Transcript Type= protein_coding
chr1	55068137	55068310	55068137	55068310	-	transcript4314.chr1.nnic@NA	transcript4314.chr1.nnic	NA	55068137	55068310	Gene ID= novel_gene_chr1_4315 TPM= 4.25 Transcript Type= NA
chr1	55175220	55215369	55175220	55215369	-	transcript4317.chr1.nic@USP24	transcript4317.chr1.nic	protein_coding	55214790,55177967,55175220	55215369,55178132,55176443	Gene ID= ENSG00000162402.13 TPM= 2.12 Transcript Type= NA
chr1	55104741	55107864	55104741	55107864	+	transcript4319.chr1.nnic@NA	transcript4319.chr1.nnic	NA	55104741	55107864	Gene ID= novel_gene_chr1_4320 TPM= 8.5 Transcript Type= NA
chr1	55205337	55206671	55205337	55206671	+	transcript4321.chr1.nnic@NA	transcript4321.chr1.nnic	NA	55205337	55206671	Gene ID= novel_gene_chr1_4322 TPM= 6.37 Transcript Type= NA
chr1	56494747	56579568	56494747	56579568	-	ENST00000371250.3@PLPP3	ENST00000371250.3	protein_coding	56578878,56536955,56524277,56523823,56511976,56494747	56579568,56537112,56524554,56523880,56512152,56496676	Gene ID= ENSG00000162407.8 TPM= 37.18 Transcript Type= protein_coding
chr1	56535188	56538969	56535188	56538969	+	transcript4330.chr1.nnic@NA	transcript4330.chr1.nnic	NA	56535188	56538969	Gene ID= novel_gene_chr1_4331 TPM= 5.31 Transcript Type= NA
chr1	56559558	56561140	56559558	56561140	-	transcript4332.chr1.nnic@NA	transcript4332.chr1.nnic	NA	56559558	56561140	Gene ID= novel_gene_chr1_4333 TPM= 2.12 Transcript Type= NA
chr1	56645314	56648040	56645314	56648040	+	transcript4354.chr1.nnic@NA	transcript4354.chr1.nnic	NA	56645314	56648040	Gene ID= novel_gene_chr1_4355 TPM= 10.62 Transcript Type= NA
chr1	56697014	56701712	56697014	56701712	-	transcript4364.chr1.nnic@NA	transcript4364.chr1.nnic	NA	56697014	56701712	Gene ID= novel_gene_chr1_4365 TPM= 10.62 Transcript Type= NA
chr1	56707575	56710682	56707575	56710682	+	transcript4356.chr1.nnic@NA	transcript4356.chr1.nnic	NA	56707575	56710682	Gene ID= novel_gene_chr1_4357 TPM= 6.37 Transcript Type= NA
chr1	56710146	56712558	56710146	56712558	+	transcript4360.chr1.nnic@NA	transcript4360.chr1.nnic	NA	56710146	56712558	Gene ID= novel_gene_chr1_4361 TPM= 3.19 Transcript Type= NA
chr1	56712764	56714815	56712764	56714815	+	transcript4358.chr1.nnic@NA	transcript4358.chr1.nnic	NA	56712764	56714815	Gene ID= novel_gene_chr1_4359 TPM= 5.31 Transcript Type= NA
chr1	57090207	57091847	57090207	57091847	+	transcript4366.chr1.nnic@NA	transcript4366.chr1.nnic	NA	57090207,57090765,57091606	57090318,57090836,57091847	Gene ID= novel_gene_chr1_4367 TPM= 5.31 Transcript Type= NA
chr1	58480719	58546802	58480719	58546802	-	transcript4370.chr1.nic@OMA1	transcript4370.chr1.nic	protein_coding	58546664,58538795,58536513,58534158,58533953,58530601,58527261,58506060,58480719	58546802,58539310,58536741,58534331,58534060,58530729,58527335,58506209,58481174	Gene ID= ENSG00000162600.11 TPM= 7.44 Transcript Type= NA
chr1	58480719	58546810	58480719	58546810	-	transcript4371.chr1.nnic@OMA1	transcript4371.chr1.nnic	protein_coding	58546699,58538795,58536513,58534158,58533953,58530601,58527261,58506060,58480719	58546810,58539310,58536741,58534331,58534060,58530729,58527335,58506209,58481174	Gene ID= ENSG00000162600.11 TPM= 19.12 Transcript Type= NA
chr1	58480719	58546800	58480719	58546800	-	ENST00000371226.7@OMA1	ENST00000371226.7	protein_coding	58546703,58538795,58536513,58534158,58533953,58530601,58527261,58506060,58480719	58546800,58539310,58536741,58534331,58534060,58530729,58527335,58506209,58481174	Gene ID= ENSG00000162600.11 TPM= 22.31 Transcript Type= protein_coding
chr1	58575423	58577773	58575423	58577773	-	ENST00000371225.3@TACSTD2	ENST00000371225.3	protein_coding	58575423	58577773	Gene ID= ENSG00000184292.6 TPM= 1.06 Transcript Type= protein_coding
chr1	58654739	58700092	58654739	58700092	-	ENST00000472487.5@MYSM1	ENST00000472487.5	protein_coding	58699985,58695129,58692861,58690340,58690226,58689038,58685153,58681785,58676926,58675477,58673573,58671870,58668984,58668632,58667847,58667038,58665499,58661406,58661170,58654739	58700092,58695207,58692931,58690417,58690249,58689116,58685251,58682545,58677056,58675580,58673650,58671958,58669038,58668682,58667921,58667226,58665631,58661511,58661227,58660155	Gene ID= ENSG00000162601.9 TPM= 6.37 Transcript Type= protein_coding
chr1	58668940	58669867	58668940	58669867	+	transcript4384.chr1.nnic@NA	transcript4384.chr1.nnic	NA	58668940	58669867	Gene ID= novel_gene_chr1_4385 TPM= 6.37 Transcript Type= NA
chr1	58686089	58686976	58686089	58686976	+	transcript4386.chr1.nnic@NA	transcript4386.chr1.nnic	NA	58686089	58686976	Gene ID= novel_gene_chr1_4387 TPM= 2.12 Transcript Type= NA
chr1	58780788	58784327	58780788	58784327	-	ENST00000371222.3@JUN	ENST00000371222.3	protein_coding	58780788	58784327	Gene ID= ENSG00000177606.6 TPM= 19.12 Transcript Type= protein_coding
chr1	58785155	58816042	58785155	58816042	+	transcript4398.chr1.nnic@LINC01135	transcript4398.chr1.nnic	lincRNA	58785155,58815268	58785305,58816042	Gene ID= ENSG00000234807.5 TPM= 2.12 Transcript Type= NA
chr1	58882874	58903747	58882874	58903747	-	ENST00000634763.1@AC105277.1	ENST00000634763.1	lincRNA	58903568,58895845,58889149,58882874	58903747,58896009,58889208,58883734	Gene ID= ENSG00000232453.6 TPM= 2.12 Transcript Type= lincRNA
chr1	59296708	59762727	59296708	59762727	+	transcript4402.chr1.nic@FGGY	transcript4402.chr1.nic	protein_coding	59296708,59321536,59339958,59346247,59378749,59456961,59512311,59554124,59607803,59625988,59638228,59660219,59667283,59674039,59757931,59762503	59296907,59321750,59340069,59346398,59378837,59457076,59512439,59554227,59607910,59626049,59638375,59660293,59667403,59674133,59757992,59762727	Gene ID= ENSG00000172456.17 TPM= 13.28 Transcript Type= NA
chr1	59427230	59762727	59427230	59762727	+	transcript4410.chr1.nnic@FGGY	transcript4410.chr1.nnic	protein_coding	59427230,59456961,59512311,59554124,59607803,59625988,59638228,59660219,59667283,59674039,59757931,59762503	59427432,59457076,59512439,59554227,59607910,59626049,59638375,59660293,59667403,59674133,59757992,59762727	Gene ID= ENSG00000172456.17 TPM= 3.19 Transcript Type= NA
chr1	59296991	59762730	59296991	59762730	+	ENST00000303721.11@FGGY	ENST00000303721.11	protein_coding	59296991,59321536,59339958,59346247,59378749,59456961,59512311,59554124,59607803,59625988,59638228,59660219,59667283,59674039,59757931,59762503	59297150,59321750,59340069,59346398,59378837,59457076,59512439,59554227,59607910,59626049,59638375,59660293,59667403,59674133,59757992,59762730	Gene ID= ENSG00000172456.17 TPM= 4.78 Transcript Type= protein_coding
chr1	59893308	59926790	59893308	59926790	-	ENST00000371204.3@CYP2J2	ENST00000371204.3	protein_coding	59926537,59915938,59912162,59911608,59909784,59907786,59904871,59900965,59893308	59926790,59916100,59912311,59911768,59909960,59907927,59905058,59901103,59893829	Gene ID= ENSG00000134716.9 TPM= 148.6 Transcript Type= protein_coding
chr1	59893316	59926773	59893316	59926773	-	transcript4418.chr1.nnic@CYP2J2	transcript4418.chr1.nnic	protein_coding	59926521,59912162,59911608,59909784,59907786,59904871,59900965,59893316	59926773,59912311,59911768,59909960,59907927,59905058,59901103,59893829	Gene ID= ENSG00000134716.9 TPM= 9.27 Transcript Type= NA
chr1	59893320	59926761	59893320	59926761	-	ENST00000466095.5@CYP2J2	ENST00000466095.5	protein_coding	59926537,59915938,59912162,59911608,59909784,59907786,59900965,59893320	59926761,59916100,59912311,59911768,59909960,59907927,59901103,59893829	Gene ID= ENSG00000134716.9 TPM= 4.14 Transcript Type= processed_transcript
chr1	59914700	59918680	59914700	59918680	+	transcript4423.chr1.nnic@NA	transcript4423.chr1.nnic	NA	59914700	59918680	Gene ID= novel_gene_chr1_4424 TPM= 15.93 Transcript Type= NA
chr1	59924084	59924759	59924084	59924759	+	transcript4425.chr1.nnic@NA	transcript4425.chr1.nnic	NA	59924084	59924759	Gene ID= novel_gene_chr1_4426 TPM= 8.5 Transcript Type= NA
chr1	61082389	61456394	61082389	61456394	+	transcript4437.chr1.nnic@NFIA	transcript4437.chr1.nnic	protein_coding	61082389,61088149,61277520,61332512,61352450,61359147,61383237,61404104,61406562,61426465,61455303	61082818,61088680,61277585,61332586,61352567,61359274,61383365,61404267,61406727,61426556,61456394	Gene ID= ENSG00000162599.15 TPM= 11.15 Transcript Type= NA
chr1	61082621	61456394	61082621	61456394	+	ENST00000371187.7@NFIA	ENST00000371187.7	protein_coding	61082621,61088149,61277520,61332512,61352450,61359147,61383237,61404104,61406562,61455303	61082818,61088680,61277585,61332586,61352567,61359274,61383365,61404282,61406727,61456394	Gene ID= ENSG00000162599.15 TPM= 24.96 Transcript Type= protein_coding
chr1	61225555	61228000	61225555	61228000	-	transcript4452.chr1.nnic@NA	transcript4452.chr1.nnic	NA	61225555	61228000	Gene ID= novel_gene_chr1_4453 TPM= 4.25 Transcript Type= NA
chr1	61681046	61725161	61681046	61725161	-	transcript4455.chr1.nic@TM2D1	transcript4455.chr1.nic	protein_coding	61724957,61723713,61709329,61700934,61694697,61686792,61683417,61681046	61725161,61723786,61709437,61701025,61694770,61686921,61683546,61681350	Gene ID= ENSG00000162604.12 TPM= 5.52 Transcript Type= NA
chr1	61681046	61725161	61681046	61725161	-	transcript4456.chr1.nnic@TM2D1	transcript4456.chr1.nnic	protein_coding	61724957,61723713,61709329,61700934,61686792,61683417,61681046	61725161,61723786,61709437,61701025,61686921,61683546,61681350	Gene ID= ENSG00000162604.12 TPM= 2.34 Transcript Type= NA
chr1	61681049	61725423	61681049	61725423	-	ENST00000371180.6@TM2D1	ENST00000371180.6	protein_coding	61724957,61723713,61709329,61700934,61694697,61683417,61681049	61725423,61723786,61709437,61701025,61694770,61683546,61681350	Gene ID= ENSG00000162604.12 TPM= 61.82 Transcript Type= protein_coding
chr1	61681046	61725141	61681046	61725141	-	transcript4459.chr1.nnic@TM2D1	transcript4459.chr1.nnic	protein_coding	61724902,61709329,61700934,61694697,61683417,61681046	61725141,61709437,61701025,61694770,61683546,61681350	Gene ID= ENSG00000162604.12 TPM= 2.34 Transcript Type= NA
chr1	61681046	61725161	61681046	61725161	-	transcript4462.chr1.nnic@TM2D1	transcript4462.chr1.nnic	protein_coding	61724957,61723713,61709329,61700934,61683417,61681046	61725161,61723786,61709437,61701025,61683546,61681350	Gene ID= ENSG00000162604.12 TPM= 2.34 Transcript Type= NA
chr1	61681046	61725141	61681046	61725141	-	transcript4465.chr1.nnic@TM2D1	transcript4465.chr1.nnic	protein_coding	61724902,61709329,61700934,61694697,61681046	61725141,61709437,61701025,61694770,61683546	Gene ID= ENSG00000162604.12 TPM= 4.25 Transcript Type= NA
chr1	61741998	61742424	61741998	61742424	-	ENST00000605725.1@AC099791.2	ENST00000605725.1	lincRNA	61741998	61742424	Gene ID= ENSG00000271200.1 TPM= 2.12 Transcript Type= lincRNA
chr1	61952148	62163504	61952148	62163504	+	transcript4478.chr1.nic@PATJ	transcript4478.chr1.nic	protein_coding	61952148,61990168,62017856,62037977,62050966,62079450,62084515,62108437,62114053,62116532,62117132,62121181,62123021,62127972,62128841,62148284,62160908,62162883	61952411,61990364,62017947,62038049,62051058,62079567,62084648,62108520,62114246,62116679,62117218,62121295,62123058,62128094,62128945,62148390,62161389,62163504	Gene ID= ENSG00000132849.19 TPM= 4.25 Transcript Type= NA
chr1	61952054	62117393	61952054	62117393	+	transcript4486.chr1.nic@PATJ	transcript4486.chr1.nic	protein_coding	61952054,61990168,62017856,62037977,62050966,62079450,62084515,62108437,62114053,62116532,62117132	61952411,61990364,62017947,62038049,62051058,62079567,62084648,62108520,62114246,62116679,62117393	Gene ID= ENSG00000132849.19 TPM= 5.31 Transcript Type= NA
chr1	61952312	62117393	61952312	62117393	+	ENST00000307297.8@PATJ	ENST00000307297.8	protein_coding	61952312,61990168,62017856,62037977,62050966,62079450,62084515,62100319,62108437,62114053,62116532,62117132	61952411,61990364,62017947,62038049,62051058,62079567,62084648,62100408,62108520,62114246,62116679,62117393	Gene ID= ENSG00000132849.19 TPM= 1.06 Transcript Type= protein_coding
chr1	61756565	61759788	61756565	61759788	-	transcript4496.chr1.nnic@NA	transcript4496.chr1.nnic	NA	61756565	61759788	Gene ID= novel_gene_chr1_4497 TPM= 5.31 Transcript Type= NA
chr1	62161583	62163502	62161583	62163502	+	transcript4494.chr1.nnic@NA	transcript4494.chr1.nnic	NA	62161583	62163502	Gene ID= novel_gene_chr1_4495 TPM= 2.12 Transcript Type= NA
chr1	62436304	62451802	62436304	62451802	+	ENST00000371146.5@USP1	ENST00000371146.5	protein_coding	62436304,62439799,62441488,62442195,62443159,62444738,62447341,62448465,62450246	62436562,62440037,62441608,62442299,62443319,62445429,62447511,62448666,62451802	Gene ID= ENSG00000162607.12 TPM= 6.37 Transcript Type= protein_coding
chr1	62436655	62451804	62436655	62451804	+	ENST00000339950.4@USP1	ENST00000339950.4	protein_coding	62436655,62439799,62441488,62442195,62443159,62444738,62447341,62448465,62450246	62437400,62440037,62441608,62442299,62443319,62445429,62447511,62448666,62451804	Gene ID= ENSG00000162607.12 TPM= 11.68 Transcript Type= protein_coding
chr1	62584105	62688368	62584105	62688368	-	ENST00000404627.3@DOCK7	ENST00000404627.3	protein_coding	62688227,62663025,62653984,62653725,62648415,62648106,62647691,62636537,62634773,62633498,62631240,62625259,62619900,62618706,62586507,62584105	62688368,62663130,62654159,62653793,62648544,62648318,62647776,62636603,62634922,62633578,62631405,62625401,62619993,62618868,62586624,62584878	Gene ID= ENSG00000116641.17 TPM= 1.06 Transcript Type= protein_coding
chr1	62784135	62865513	62784135	62865513	+	ENST00000317868.8@ATG4C	ENST00000317868.8	protein_coding	62784135,62803719,62805172,62816575,62819005,62821139,62829040,62834038,62834776,62841428,62863992	62784273,62803862,62805255,62816808,62819335,62821209,62829176,62834116,62834852,62841547,62865513	Gene ID= ENSG00000125703.14 TPM= 1.06 Transcript Type= protein_coding
chr1	62784135	62865513	62784135	62865513	+	ENST00000371120.7@ATG4C	ENST00000371120.7	protein_coding	62784135,62803719,62805172,62816575,62819005,62821139,62829040,62834038,62834776,62841428,62863992	62784225,62803862,62805255,62816808,62819335,62821209,62829176,62834116,62834852,62841547,62865513	Gene ID= ENSG00000125703.14 TPM= 1.06 Transcript Type= protein_coding
chr1	63440773	63523502	63440773	63523502	-	ENST00000489099.5@ITGB3BP	ENST00000489099.5	protein_coding	63523129,63508528,63490083,63478764,63454890,63454380,63453918,63447565,63446806,63440773	63523502,63508570,63490218,63478833,63454968,63454473,63453974,63447614,63446856,63441103	Gene ID= ENSG00000142856.16 TPM= 5.31 Transcript Type= nonsense_mediated_decay
chr1	63523253	63572693	63523253	63572693	+	transcript4527.chr1.nic@EFCAB7	transcript4527.chr1.nic	protein_coding	63523253,63525572,63531820,63532670,63533454,63534095,63545916,63551725,63555358,63557114,63561709,63568310,63571021,63572442	63523569,63525759,63532031,63532756,63533649,63534216,63546057,63551834,63555515,63557247,63561857,63568519,63571128,63572693	Gene ID= ENSG00000203965.12 TPM= 3.19 Transcript Type= NA
chr1	63593276	63660245	63593276	63660245	+	ENST00000371084.7@PGM1	ENST00000371084.7	protein_coding	63593276,63629425,63629942,63631657,63634829,63636234,63638685,63648517,63651669,63654332,63659586	63593734,63629587,63630088,63631782,63635019,63636388,63638800,63648652,63651852,63654466,63660245	Gene ID= ENSG00000079739.15 TPM= 395.65 Transcript Type= protein_coding
chr1	63854354	64143385	63854354	64143385	+	transcript4547.chr1.nnic@ROR1	transcript4547.chr1.nnic	protein_coding	63854354,63855844,64009305,64049691,64050686,64137369,64140109,64142405	63854404,63855934,64009376,64049978,64050716,64137496,64140426,64143385	Gene ID= ENSG00000185483.11 TPM= 2.66 Transcript Type= NA
chr1	63774022	64143385	63774022	64143385	+	ENST00000371080.5@ROR1	ENST00000371080.5	protein_coding	63774022,64009305,64049691,64050686,64137369,64140109,64142405	63774508,64009376,64049978,64050716,64137496,64140426,64143385	Gene ID= ENSG00000185483.11 TPM= 14.34 Transcript Type= protein_coding
chr1	63785499	63786232	63785499	63786232	-	transcript4571.chr1.nnic@NA	transcript4571.chr1.nnic	NA	63785499	63786232	Gene ID= novel_gene_chr1_4572 TPM= 2.12 Transcript Type= NA
chr1	63809895	63813075	63809895	63813075	+	transcript4549.chr1.nnic@NA	transcript4549.chr1.nnic	NA	63809895	63813075	Gene ID= novel_gene_chr1_4550 TPM= 4.25 Transcript Type= NA
chr1	63815448	63820330	63815448	63820330	-	transcript4565.chr1.nnic@NA	transcript4565.chr1.nnic	NA	63815448	63820330	Gene ID= novel_gene_chr1_4566 TPM= 3.19 Transcript Type= NA
chr1	63847249	63849546	63847249	63849546	+	transcript4551.chr1.nnic@NA	transcript4551.chr1.nnic	NA	63847249	63849546	Gene ID= novel_gene_chr1_4552 TPM= 2.12 Transcript Type= NA
chr1	63856081	63859543	63856081	63859543	-	transcript4567.chr1.nnic@NA	transcript4567.chr1.nnic	NA	63856081	63859543	Gene ID= novel_gene_chr1_4568 TPM= 3.19 Transcript Type= NA
chr1	63895364	63898547	63895364	63898547	+	transcript4553.chr1.nnic@NA	transcript4553.chr1.nnic	NA	63895364	63898547	Gene ID= novel_gene_chr1_4554 TPM= 2.12 Transcript Type= NA
chr1	63902958	63905812	63902958	63905812	+	transcript4555.chr1.nnic@NA	transcript4555.chr1.nnic	NA	63902958	63905812	Gene ID= novel_gene_chr1_4556 TPM= 2.12 Transcript Type= NA
chr1	63927961	63930959	63927961	63930959	-	transcript4563.chr1.nnic@NA	transcript4563.chr1.nnic	NA	63927961	63930959	Gene ID= novel_gene_chr1_4564 TPM= 9.56 Transcript Type= NA
chr1	64009303	64011311	64009303	64011311	+	transcript4557.chr1.nnic@NA	transcript4557.chr1.nnic	NA	64009303	64011311	Gene ID= novel_gene_chr1_4558 TPM= 2.12 Transcript Type= NA
chr1	64145916	64148649	64145916	64148649	+	transcript4559.chr1.nnic@NA	transcript4559.chr1.nnic	NA	64145916	64148649	Gene ID= novel_gene_chr1_4560 TPM= 2.12 Transcript Type= NA
chr1	64177428	64181197	64177428	64181197	+	transcript4561.chr1.nnic@NA	transcript4561.chr1.nnic	NA	64177428	64181197	Gene ID= novel_gene_chr1_4562 TPM= 4.25 Transcript Type= NA
chr1	64745095	64833232	64745095	64833232	+	ENST00000371072.8@RAVER2	ENST00000371072.8	protein_coding	64745095,64768656,64777623,64781380,64789388,64802976,64804773,64804991,64807206,64812738,64814704,64830839	64745421,64768722,64778092,64781571,64789514,64803061,64804838,64805105,64807474,64812849,64814840,64833232	Gene ID= ENSG00000162437.14 TPM= 8.5 Transcript Type= protein_coding
chr1	64864928	64966569	64864928	64966569	-	transcript4585.chr1.nic@JAK1	transcript4585.chr1.nic	protein_coding	64966333,64886259,64883277,64879025,64873370,64869311,64866866,64864928	64966569,64886341,64883475,64879148,64873523,64869474,64867208,64864972	Gene ID= ENSG00000162434.11 TPM= 3.19 Transcript Type= NA
chr1	64833229	64966504	64833229	64966504	-	ENST00000342505.4@JAK1	ENST00000342505.4	protein_coding	64966333,64886259,64883277,64879025,64873370,64869311,64866866,64864787,64860105,64857656,64855509,64850804,64847532,64846649,64845513,64844754,64844064,64841451,64841245,64839603,64838465,64837932,64836098,64835396,64833229	64966504,64886341,64883475,64879148,64873523,64869474,64867208,64864972,64860262,64857779,64855698,64850910,64847675,64846736,64845640,64844889,64844215,64841601,64841339,64839795,64838589,64838104,64836215,64835506,64834657	Gene ID= ENSG00000162434.11 TPM= 103.03 Transcript Type= protein_coding
chr1	65147670	65227029	65147670	65227029	+	transcript4594.chr1.nnic@AK4	transcript4594.chr1.nnic	protein_coding	65147670,65148278,65190710,65218754,65224752,65226063	65147763,65148552,65190829,65218926,65224870,65227029	Gene ID= ENSG00000162433.14 TPM= 32.4 Transcript Type= NA
chr1	65254459	65415276	65254459	65415276	+	transcript4617.chr1.nic@DNAJC6	transcript4617.chr1.nic	protein_coding	65254459,65364635,65365885,65366048,65379402,65384193,65385712,65386812,65388336,65389256,65389547,65392431,65394898,65398813,65401761,65405870,65408641,65411250,65412924	65254649,65364785,65365934,65366196,65379524,65384326,65385906,65386929,65388415,65389449,65389627,65392865,65395032,65398881,65401880,65406133,65408783,65411426,65415276	Gene ID= ENSG00000116675.15 TPM= 11.68 Transcript Type= NA
chr1	65420668	65428009	65420668	65428009	+	ENST00000497874.5@LEPROT	ENST00000497874.5	protein_coding	65420668,65425303,65427782	65420740,65425378,65428009	Gene ID= ENSG00000213625.8 TPM= 1.06 Transcript Type= processed_transcript
chr1	65420587	65436007	65420587	65436007	+	ENST00000371065.8@LEPROT	ENST00000371065.8	protein_coding	65420587,65425303,65429862,65431803	65420740,65425378,65430048,65436007	Gene ID= ENSG00000213625.8 TPM= 12.75 Transcript Type= protein_coding
chr1	65420652	65635428	65420652	65635428	+	ENST00000371060.7@LEPR	ENST00000371060.7	protein_coding	65420652,65425303,65565546,65570473,65572326,65592657,65596448,65598660,65601392,65601843,65605038,65608753,65609947,65610214,65616008,65617964,65619928,65621353,65622906,65633152	65420740,65425378,65565605,65570802,65572449,65592865,65596593,65598804,65601682,65601960,65605237,65608901,65610106,65610296,65616224,65618146,65620023,65621458,65622981,65635428	Gene ID= ENSG00000116678.19 TPM= 2.12 Transcript Type= protein_coding
chr1	65525689	65635409	65525689	65635409	+	ENST00000616738.4@LEPR	ENST00000616738.4	protein_coding	65525689,65565546,65570473,65572326,65592657,65596448,65598660,65601392,65601843,65605038,65608753,65609947,65610214,65616008,65617964,65619928,65621353,65622906,65633152	65525818,65565605,65570802,65572449,65592865,65596593,65598804,65601682,65601960,65605237,65608901,65610106,65610296,65616224,65618146,65620023,65621458,65622981,65635409	Gene ID= ENSG00000116678.19 TPM= 2.12 Transcript Type= protein_coding
chr1	66332004	66374579	66332004	66374579	+	ENST00000371045.9@PDE4B	ENST00000371045.9	protein_coding	66332004,66355527,66361615,66363168,66363407,66365667,66367696,66367943,66368787,66372313	66332620,66355620,66361793,66363266,66363571,66365766,66367850,66368065,66368969,66374579	Gene ID= ENSG00000184588.17 TPM= 3.19 Transcript Type= protein_coding
chr1	66922819	66925196	66922819	66925196	-	transcript4643.chr1.nnic@NA	transcript4643.chr1.nnic	NA	66922819	66925196	Gene ID= novel_gene_chr1_4644 TPM= 2.12 Transcript Type= NA
chr1	66930179	66963142	66930179	66963142	+	transcript4639.chr1.nic@MIER1	transcript4639.chr1.nic	protein_coding	66930179,66940028,66946150,66958059,66958851,66959679,66963088	66930400,66940052,66946295,66958220,66958983,66959743,66963142	Gene ID= ENSG00000198160.14 TPM= 2.12 Transcript Type= NA
chr1	66934574	66935775	66934574	66935775	-	transcript4641.chr1.nnic@NA	transcript4641.chr1.nnic	NA	66934574	66935775	Gene ID= novel_gene_chr1_4642 TPM= 4.25 Transcript Type= NA
chr1	67412385	67430399	67412385	67430399	-	ENST00000361219.10@SERBP1	ENST00000361219.10	protein_coding	67429988,67426135,67425083,67424888,67424200,67420009,67415166,67412385	67430399,67426285,67425223,67424977,67424277,67420186,67415339,67413263	Gene ID= ENSG00000142864.14 TPM= 2.12 Transcript Type= protein_coding
chr1	67411038	67430386	67411038	67430386	-	ENST00000370995.6@SERBP1	ENST00000370995.6	protein_coding	67429988,67426135,67425083,67424888,67424200,67420009,67415166,67411038	67430386,67426285,67425223,67424977,67424322,67420186,67415339,67413263	Gene ID= ENSG00000142864.14 TPM= 65.32 Transcript Type= protein_coding
chr1	67412867	67430372	67412867	67430372	-	ENST00000370990.5@SERBP1	ENST00000370990.5	protein_coding	67429988,67426135,67425083,67424888,67424200,67420009,67415166,67412867	67430372,67426285,67425223,67424959,67424322,67420186,67415339,67413263	Gene ID= ENSG00000142864.14 TPM= 21.77 Transcript Type= protein_coding
chr1	67408269	67409413	67408269	67409413	-	transcript4680.chr1.nnic@NA	transcript4680.chr1.nnic	NA	67408269	67409413	Gene ID= novel_gene_chr1_4681 TPM= 3.19 Transcript Type= NA
chr1	67685061	67688338	67685061	67688338	+	ENST00000370986.8@GADD45A	ENST00000370986.8	protein_coding	67685061,67686025,67686350,67687661	67685538,67686126,67686587,67688338	Gene ID= ENSG00000116717.11 TPM= 168.88 Transcript Type= protein_coding
chr1	67685194	67688334	67685194	67688334	+	transcript4687.chr1.nnic@NA	transcript4687.chr1.nnic	NA	67685194	67688334	Gene ID= novel_gene_chr1_4688 TPM= 3.19 Transcript Type= NA
chr1	67704318	67832109	67704318	67832109	-	transcript4692.chr1.nnic@GNG12	transcript4692.chr1.nnic	protein_coding	67831819,67777458,67707594,67704318	67832109,67777507,67707712,67705576	Gene ID= ENSG00000172380.5 TPM= 2.12 Transcript Type= NA
chr1	67701466	67833467	67701466	67833467	-	ENST00000370982.3@GNG12	ENST00000370982.3	protein_coding	67833344,67777458,67707594,67701466	67833467,67777507,67707712,67705576	Gene ID= ENSG00000172380.5 TPM= 9.56 Transcript Type= protein_coding
chr1	68045962	68051022	68045962	68051022	-	transcript4697.chr1.nic@DIRAS3	transcript4697.chr1.nic	protein_coding	68050548,68045962	68051022,68047362	Gene ID= ENSG00000162595.5 TPM= 142.33 Transcript Type= NA
chr1	68098473	68232557	68098473	68232557	-	transcript4700.chr1.nic@WLS	transcript4700.chr1.nic	protein_coding	68232194,68193955,68159123,68155099,68153517,68150188,68148563,68148136,68145869,68144569,68137780,68098473	68232557,68194227,68159247,68155260,68153653,68150356,68148660,68148199,68146012,68144652,68137933,68098753	Gene ID= ENSG00000116729.13 TPM= 11.68 Transcript Type= NA
chr1	68125358	68232553	68125358	68232553	-	ENST00000262348.8@WLS	ENST00000262348.8	protein_coding	68232194,68193955,68159123,68155099,68153517,68150188,68148563,68148136,68145869,68144569,68137780,68125358	68232553,68194227,68159247,68155260,68153653,68150356,68148660,68148199,68146012,68144652,68137933,68126335	Gene ID= ENSG00000116729.13 TPM= 10.62 Transcript Type= protein_coding
chr1	68098473	68232545	68098473	68232545	-	ENST00000354777.6@WLS	ENST00000354777.6	protein_coding	68232194,68193955,68159123,68155099,68153517,68150188,68148563,68148136,68145869,68144569,68137780,68098473	68232545,68194221,68159247,68155260,68153653,68150356,68148660,68148199,68146012,68144652,68137933,68098753	Gene ID= ENSG00000116729.13 TPM= 13.81 Transcript Type= protein_coding
chr1	68193858	68232523	68193858	68232523	-	ENST00000370971.1@WLS	ENST00000370971.1	protein_coding	68232194,68193858	68232523,68194227	Gene ID= ENSG00000116729.13 TPM= 1.06 Transcript Type= protein_coding
chr1	68188590	68192956	68188590	68192956	+	transcript4710.chr1.nnic@NA	transcript4710.chr1.nnic	NA	68188590	68192956	Gene ID= novel_gene_chr1_4711 TPM= 3.19 Transcript Type= NA
chr1	70144805	70205620	70144805	70205620	-	ENST00000370952.3@LRRC40	ENST00000370952.3	protein_coding	70205390,70189092,70187265,70184785,70181086,70178851,70175810,70173622,70173465,70159330,70155689,70152433,70151128,70148487,70144805	70205620,70189273,70187338,70184914,70181209,70178993,70175982,70173709,70173510,70159438,70155796,70152543,70151205,70148672,70145905	Gene ID= ENSG00000066557.5 TPM= 18.06 Transcript Type= protein_coding
chr1	70221415	70250651	70221415	70250651	+	transcript4726.chr1.nic@SRSF11	transcript4726.chr1.nic	protein_coding	70221415,70228422,70231859,70232268,70234696,70235501,70237425,70239439,70244684,70246818,70249952,70250365,70250608	70221839,70228555,70231975,70232377,70234788,70235550,70237552,70239520,70244815,70246907,70250047,70250503,70250651	Gene ID= ENSG00000116754.13 TPM= 3.19 Transcript Type= NA
chr1	70205670	70250392	70205670	70250392	+	transcript4729.chr1.nic@SRSF11	transcript4729.chr1.nic	protein_coding	70205670,70221615,70228422,70232268,70234696,70235501,70237425,70239439,70244684,70246818,70249952,70250365	70205780,70221839,70228555,70232377,70234788,70235550,70237552,70239520,70244815,70246907,70250047,70250392	Gene ID= ENSG00000116754.13 TPM= 3.19 Transcript Type= NA
chr1	70221361	70252001	70221361	70252001	+	transcript4733.chr1.nic@SRSF11	transcript4733.chr1.nic	protein_coding	70221361,70228422,70232268,70234696,70235501,70237425,70239439,70244684,70246818,70249952,70250365,70250608	70221839,70228555,70232377,70234788,70235550,70237552,70239520,70244815,70246907,70250047,70250503,70252001	Gene ID= ENSG00000116754.13 TPM= 5.31 Transcript Type= NA
chr1	70221361	70228940	70221361	70228940	+	transcript4752.chr1.nic@SRSF11	transcript4752.chr1.nic	protein_coding	70221361,70228422	70221839,70228940	Gene ID= ENSG00000116754.13 TPM= 2.12 Transcript Type= NA
chr1	70205682	70251617	70205682	70251617	+	ENST00000370951.5@SRSF11	ENST00000370951.5	protein_coding	70205682,70221615,70228422,70232268,70234696,70235501,70237425,70239439,70244684,70246818,70249952,70250365,70250611	70205780,70221839,70228555,70232377,70234788,70235550,70237552,70239520,70244815,70246907,70250047,70250503,70251617	Gene ID= ENSG00000116754.13 TPM= 4.25 Transcript Type= protein_coding
chr1	70205724	70253052	70205724	70253052	+	ENST00000370950.7@SRSF11	ENST00000370950.7	protein_coding	70205724,70221612,70228422,70232268,70234696,70235501,70237425,70239439,70244684,70246818,70249952,70250365,70250608	70205780,70221839,70228555,70232377,70234788,70235550,70237552,70239520,70244815,70246907,70250047,70250503,70253052	Gene ID= ENSG00000116754.13 TPM= 1.06 Transcript Type= protein_coding
chr1	70260588	70354722	70260588	70354722	-	ENST00000370944.8@ANKRD13C	ENST00000370944.8	protein_coding	70353979,70336058,70324853,70315481,70313745,70306224,70300764,70296130,70292388,70276765,70274720,70270856,70260588	70354722,70336099,70324957,70315566,70313790,70306290,70300908,70296261,70292549,70276844,70274818,70270956,70262847	Gene ID= ENSG00000118454.12 TPM= 3.19 Transcript Type= protein_coding
chr1	70970781	71047788	70970781	71047788	-	ENST00000306666.9@PTGER3	ENST00000306666.9	protein_coding	71046681,71012305,70974297,70970781	71047788,71012484,70974388,70971733	Gene ID= ENSG00000050628.20 TPM= 3.19 Transcript Type= protein_coding
chr1	71065054	71081059	71065054	71081059	-	transcript4776.chr1.nic@ZRANB2	transcript4776.chr1.nic	protein_coding	71080940,71078656,71078457,71076795,71072472,71072121,71069276,71066776,71065678,71065054	71081059,71078708,71078565,71076877,71072548,71072255,71070996,71066934,71065752,71065137	Gene ID= ENSG00000132485.13 TPM= 3.19 Transcript Type= NA
chr1	71066382	71081037	71066382	71081037	-	transcript4778.chr1.nic@ZRANB2	transcript4778.chr1.nic	protein_coding	71080940,71078656,71078457,71076795,71072472,71072121,71070827,71069276,71066382	71081037,71078708,71078565,71076877,71072548,71072255,71070996,71069362,71066934	Gene ID= ENSG00000132485.13 TPM= 3.19 Transcript Type= NA
chr1	71068798	71081052	71068798	71081052	-	transcript4782.chr1.nic@ZRANB2	transcript4782.chr1.nic	protein_coding	71080940,71078656,71078457,71076795,71072472,71072121,71068798	71081052,71078708,71078565,71076877,71072548,71072255,71070996	Gene ID= ENSG00000132485.13 TPM= 10.62 Transcript Type= NA
chr1	71063291	71081297	71063291	71081297	-	ENST00000370920.7@ZRANB2	ENST00000370920.7	protein_coding	71080940,71078656,71078457,71076795,71072472,71072121,71070827,71069276,71066776,71063291	71081297,71078708,71078565,71076877,71072548,71072255,71070996,71069362,71066934,71065137	Gene ID= ENSG00000132485.13 TPM= 27.09 Transcript Type= protein_coding
chr1	71063337	71081011	71063337	71081011	-	ENST00000254821.10@ZRANB2	ENST00000254821.10	protein_coding	71080940,71078656,71078457,71076795,71072472,71072121,71070827,71069276,71066776,71065678,71063337	71081011,71078708,71078565,71076877,71072548,71072255,71070996,71069362,71066934,71065752,71065137	Gene ID= ENSG00000132485.13 TPM= 32.4 Transcript Type= protein_coding
chr1	74198212	74207234	74198212	74207234	+	ENST00000370898.7@FPGT	ENST00000370898.7	protein_coding	74198212,74199664,74201318,74204391	74198360,74199831,74201410,74207234	Gene ID= ENSG00000254685.6 TPM= 13.81 Transcript Type= protein_coding
chr1	74235366	74464925	74235366	74464925	+	transcript4793.chr1.nic@FPGT-TNNI3K	transcript4793.chr1.nic	protein_coding	74235366,74236102,74249459,74250672,74271598,74331450,74336011,74342842,74343075,74353266,74353980,74367256,74367908,74369022,74369207,74369391,74370288,74436080,74436474,74439490,74463441,74464635	74235491,74236210,74249544,74250769,74271708,74331548,74336149,74342986,74343179,74353360,74354129,74367342,74367964,74369114,74369264,74369585,74370392,74436132,74436526,74439622,74463550,74464925	Gene ID= ENSG00000259030.6 TPM= 5.31 Transcript Type= NA
chr1	74235366	74436784	74235366	74436784	+	transcript4798.chr1.nic@TNNI3K	transcript4798.chr1.nic	protein_coding	74235366,74236102,74249459,74250672,74271598,74331450,74336011,74342842,74343075,74353266,74353980,74367256,74367908,74369022,74369207,74369391,74370288,74436080,74436474	74235491,74236210,74249544,74250769,74271708,74331548,74336149,74342986,74343179,74353360,74354129,74367342,74367964,74369114,74369264,74369585,74370392,74436132,74436784	Gene ID= ENSG00000116783.14 TPM= 3.19 Transcript Type= NA
chr1	74235366	74416870	74235366	74416870	+	transcript4802.chr1.nnic@TNNI3K	transcript4802.chr1.nnic	protein_coding	74235366,74236102,74249459,74250672,74271598,74331450,74336011,74342842,74343075,74353266,74353980,74367256,74367908,74369022,74369207,74369391,74370288,74416307	74235491,74236210,74249544,74250769,74271708,74331548,74336149,74342986,74343179,74353360,74354129,74367342,74367964,74369114,74369264,74369585,74370392,74416870	Gene ID= ENSG00000116783.14 TPM= 3.19 Transcript Type= NA
chr1	74235366	74372114	74235366	74372114	+	transcript4805.chr1.nic@TNNI3K	transcript4805.chr1.nic	protein_coding	74235366,74236102,74249459,74250672,74271598,74331450,74336011,74342842,74343075,74353266,74353980,74367256,74367908,74369022,74369207,74369391,74370288	74235491,74236210,74249544,74250769,74271708,74331548,74336149,74342986,74343179,74353360,74354129,74367342,74367964,74369114,74369264,74369585,74372114	Gene ID= ENSG00000116783.14 TPM= 3.19 Transcript Type= NA
chr1	74235401	74544424	74235401	74544424	+	ENST00000326637.7@TNNI3K	ENST00000326637.7	protein_coding	74235401,74236102,74249459,74250672,74271598,74331450,74336011,74342842,74343075,74353266,74353980,74367256,74367908,74369022,74369207,74369391,74370288,74436080,74436474,74439490,74463441,74489189,74492097,74540234,74543906	74235491,74236210,74249544,74250769,74271708,74331548,74336149,74342986,74343179,74353360,74354129,74367342,74367964,74369114,74369264,74369585,74370392,74436132,74436526,74439622,74463550,74489248,74492266,74540313,74544424	Gene ID= ENSG00000116783.14 TPM= 8.5 Transcript Type= protein_coding
chr1	74250833	74254470	74250833	74254470	-	transcript4825.chr1.nnic@NA	transcript4825.chr1.nnic	NA	74250833	74254470	Gene ID= novel_gene_chr1_4826 TPM= 11.68 Transcript Type= NA
chr1	74438079	74438354	74438079	74438354	+	transcript4823.chr1.nnic@NA	transcript4823.chr1.nnic	NA	74438079	74438354	Gene ID= novel_gene_chr1_4824 TPM= 2.12 Transcript Type= NA
chr1	74451772	74453755	74451772	74453755	-	transcript4827.chr1.nnic@NA	transcript4827.chr1.nnic	NA	74451772	74453755	Gene ID= novel_gene_chr1_4828 TPM= 2.12 Transcript Type= NA
chr1	74705490	74733408	74705490	74733408	-	ENST00000417775.5@CRYZ	ENST00000417775.5	protein_coding	74732956,74730382,74724711,74723118,74719209,74714579,74710098,74707103,74706899,74705490	74733408,74730420,74724834,74723270,74719372,74714630,74710247,74707204,74706994,74706457	Gene ID= ENSG00000116791.13 TPM= 4.25 Transcript Type= protein_coding
chr1	74705486	74733128	74705486	74733128	-	transcript4832.chr1.nnic@CRYZ	transcript4832.chr1.nnic	protein_coding	74733071,74732956,74724711,74723118,74719209,74714579,74710098,74707103,74706899,74705486	74733128,74733047,74724834,74723270,74719372,74714630,74710247,74707204,74706994,74706457	Gene ID= ENSG00000116791.13 TPM= 5.66 Transcript Type= NA
chr1	74705486	74732948	74705486	74732948	-	transcript4833.chr1.nic@CRYZ	transcript4833.chr1.nic	protein_coding	74732767,74724711,74723118,74719209,74714579,74710098,74707103,74706899,74705486	74732948,74724834,74723270,74719372,74714630,74710247,74707204,74706994,74706457	Gene ID= ENSG00000116791.13 TPM= 3.54 Transcript Type= NA
chr1	74705486	74733030	74705486	74733030	-	ENST00000340866.9@CRYZ	ENST00000340866.9	protein_coding	74732956,74724711,74723118,74719209,74714579,74710098,74707103,74706899,74705486	74733030,74724834,74723270,74719372,74714630,74710247,74707204,74706994,74706457	Gene ID= ENSG00000116791.13 TPM= 40.71 Transcript Type= protein_coding
chr1	74733156	74766674	74733156	74766674	+	ENST00000370867.7@TYW3	ENST00000370867.7	protein_coding	74733156,74736542,74738690,74748751,74752292,74763894	74733418,74736622,74738788,74748822,74752425,74766674	Gene ID= ENSG00000162623.15 TPM= 12.75 Transcript Type= protein_coding
chr1	75724351	75763679	75724351	75763679	+	ENST00000370841.8@ACADM	ENST00000370841.8	protein_coding	75724351,75728401,75732644,75732853,75733528,75734791,75739980,75745806,75749419,75750451,75761122,75762692	75724817,75728488,75732741,75732922,75733628,75734871,75740110,75745914,75749559,75750546,75761370,75763679	Gene ID= ENSG00000117054.13 TPM= 324.49 Transcript Type= protein_coding
chr1	75724347	75763679	75724347	75763679	+	ENST00000541113.5@ACADM	ENST00000541113.5	protein_coding	75724347,75732644,75732853,75733528,75734791,75739980,75745806,75749419,75750451,75761122,75762692	75724817,75732741,75732922,75733628,75734871,75740110,75745914,75749559,75750546,75761370,75763679	Gene ID= ENSG00000117054.13 TPM= 9.03 Transcript Type= protein_coding
chr1	75724780	75762809	75724780	75762809	+	ENST00000420607.6@ACADM	ENST00000420607.6	protein_coding	75724780,75728389,75732644,75732853,75733528,75734791,75739980,75745806,75749419,75750451,75761122,75762692	75724817,75728488,75732741,75732922,75733628,75734871,75740110,75745914,75749559,75750546,75761370,75762809	Gene ID= ENSG00000117054.13 TPM= 1.06 Transcript Type= protein_coding
chr1	75786171	75795079	75786171	75795079	+	transcript4861.chr1.nnic@RABGGTB	transcript4861.chr1.nnic	protein_coding	75786171,75787497,75788818,75789159,75789952,75791285,75791461,75792181,75794084,75794510	75786274,75787604,75788862,75789356,75790057,75791337,75791571,75792306,75794233,75795079	Gene ID= ENSG00000137955.15 TPM= 8.5 Transcript Type= NA
chr1	75786171	75794803	75786171	75794803	+	transcript4867.chr1.nnic@RABGGTB	transcript4867.chr1.nnic	protein_coding	75786171,75787497,75790446,75791285,75791461,75792197,75794084,75794510	75786274,75790274,75790517,75791337,75791571,75792306,75794233,75794803	Gene ID= ENSG00000137955.15 TPM= 4.25 Transcript Type= NA
chr1	75787072	75787150	75787072	75787150	+	ENST00000383893.1@SNORD45C	ENST00000383893.1	snoRNA	75787072	75787150	Gene ID= ENSG00000206620.1 TPM= 1.06 Transcript Type= snoRNA
chr1	76545659	76549284	76545659	76549284	-	transcript4871.chr1.nnic@NA	transcript4871.chr1.nnic	NA	76545659	76549284	Gene ID= novel_gene_chr1_4872 TPM= 2.12 Transcript Type= NA
chr1	76074719	76634601	76074719	76634601	+	ENST00000328299.3@ST6GALNAC3	ENST00000328299.3	protein_coding	76074719,76313805,76412008,76627452,76628620	76074884,76313999,76412417,76627559,76634601	Gene ID= ENSG00000184005.10 TPM= 1.06 Transcript Type= protein_coding
chr1	77092031	77219438	77092031	77219438	-	transcript4875.chr1.nnic@PIGK	transcript4875.chr1.nnic	protein_coding	77219310,77210436,77206640,77169260,77166719,77163846,77161594,77161295,77160488,77154449,77122275,77092031	77219438,77210489,77206731,77169395,77166830,77163942,77161711,77161405,77160568,77154621,77122359,77092490	Gene ID= ENSG00000142892.14 TPM= 2.12 Transcript Type= NA
chr1	77088990	77219426	77088990	77219426	-	ENST00000370812.7@PIGK	ENST00000370812.7	protein_coding	77219310,77210436,77206640,77169260,77166719,77163846,77161594,77161295,77154449,77122275,77088990	77219426,77210489,77206731,77169395,77166830,77163942,77161711,77161405,77154621,77122359,77092490	Gene ID= ENSG00000142892.14 TPM= 11.68 Transcript Type= protein_coding
chr1	77129114	77129668	77129114	77129668	+	ENST00000471722.1@AC113935.1	ENST00000471722.1	processed_pseudogene	77129114	77129668	Gene ID= ENSG00000226084.5 TPM= 4.25 Transcript Type= processed_pseudogene
chr1	77564506	77682666	77564506	77682666	-	transcript4892.chr1.nic@ZZZ3	transcript4892.chr1.nic	protein_coding	77682585,77641522,77641384,77639449,77631850,77584517,77581979,77581776,77580998,77579527,77578774,77576068,77568332,77566081,77564506	77682666,77641655,77641446,77639602,77633405,77584655,77582126,77581888,77581069,77579628,77578869,77576220,77568466,77566181,77565784	Gene ID= ENSG00000036549.12 TPM= 4.96 Transcript Type= NA
chr1	77564506	77683439	77564506	77683439	-	transcript4896.chr1.nic@ZZZ3	transcript4896.chr1.nic	protein_coding	77683262,77641522,77641384,77639449,77631850,77584517,77581979,77581776,77580998,77579527,77578774,77576068,77568332,77566081,77564506	77683439,77641655,77641446,77639602,77633405,77584655,77582126,77581891,77581069,77579628,77578869,77576220,77568466,77566181,77565784	Gene ID= ENSG00000036549.12 TPM= 3.9 Transcript Type= NA
chr1	77564500	77682658	77564500	77682658	-	ENST00000370801.7@ZZZ3	ENST00000370801.7	protein_coding	77682585,77641522,77641384,77639449,77631850,77584517,77581979,77581776,77580998,77579527,77578774,77576068,77568332,77566081,77564500	77682658,77641655,77641446,77639602,77633405,77584655,77582126,77581891,77581069,77579628,77578869,77576220,77568466,77566181,77565784	Gene ID= ENSG00000036549.12 TPM= 7.08 Transcript Type= protein_coding
chr1	77695991	77759852	77695991	77759852	-	ENST00000370793.5@USP33	ENST00000370793.5	protein_coding	77759643,77745421,77741617,77741376,77740877,77739265,77736056,77734347,77730618,77729860,77728295,77725622,77723331,77722024,77721831,77721172,77718596,77717867,77715742,77714614,77713200,77711747,77701369,77697863,77695991	77759852,77745599,77741748,77741429,77740939,77739417,77736158,77734416,77730731,77729938,77728712,77725762,77723443,77722196,77721925,77721205,77718641,77718047,77715868,77714783,77713281,77711855,77701471,77697931,77697474	Gene ID= ENSG00000077254.14 TPM= 4.43 Transcript Type= protein_coding
chr1	77695987	77759852	77695987	77759852	-	ENST00000370794.7@USP33	ENST00000370794.7	protein_coding	77759643,77741617,77741376,77740877,77739265,77736056,77734347,77730618,77729860,77728295,77725622,77723331,77722024,77721831,77721172,77718596,77717867,77715742,77714614,77713200,77711747,77701369,77697863,77695987	77759852,77741748,77741429,77740939,77739417,77736158,77734416,77730731,77729938,77728712,77725762,77723443,77722196,77721925,77721205,77718641,77718047,77715868,77714783,77713281,77711855,77701471,77697931,77697474	Gene ID= ENSG00000077254.14 TPM= 25.67 Transcript Type= protein_coding
chr1	77695987	77759856	77695987	77759856	-	transcript4914.chr1.nic@USP33	transcript4914.chr1.nic	protein_coding	77759643,77741617,77741376,77740877,77739265,77736056,77734347,77730618,77729860,77728295,77725622,77723331,77722024,77721831,77721172,77718596,77717867,77715742,77714614,77713200,77711747,77697863,77695987	77759856,77741748,77741429,77740939,77739417,77736158,77734416,77730731,77729938,77728712,77725762,77723443,77722196,77721925,77721205,77718641,77718047,77715868,77714783,77713281,77711855,77697931,77697474	Gene ID= ENSG00000077254.14 TPM= 2.84 Transcript Type= NA
chr1	77779624	77879539	77779624	77879539	+	ENST00000443751.3@MIGA1	ENST00000443751.3	protein_coding	77779624,77783238,77801331,77803270,77806975,77813734,77815108,77843307,77858938,77859314,77860040,77861224,77863894,77866338,77873001,77874846	77779736,77783351,77801508,77803406,77807101,77813867,77815231,77843407,77859056,77859386,77860126,77861322,77864028,77866391,77873120,77879539	Gene ID= ENSG00000180488.14 TPM= 2.12 Transcript Type= protein_coding
chr1	77779624	77878421	77779624	77878421	+	ENST00000370791.7@MIGA1	ENST00000370791.7	protein_coding	77779624,77783238,77801331,77803270,77806975,77813734,77815108,77843307,77858938,77859314,77860040,77861224,77863894,77866338,77873004,77874846	77779736,77783351,77801508,77803406,77807101,77813867,77815231,77843407,77859056,77859386,77860126,77861322,77864028,77866391,77873120,77878421	Gene ID= ENSG00000180488.14 TPM= 6.37 Transcript Type= protein_coding
chr1	77888534	77943247	77888534	77943247	+	transcript4928.chr1.nic@NEXN	transcript4928.chr1.nic	protein_coding	77888534,77916055,77917566,77917960,77918125,77925188,77926414,77926716,77929316,77933282,77935823,77942023,77942461,77942900	77888759,77916133,77917757,77918038,77918273,77925229,77926611,77926892,77929504,77933479,77936044,77942208,77942818,77943247	Gene ID= ENSG00000162614.18 TPM= 33.67 Transcript Type= NA
chr1	77888628	77943224	77888628	77943224	+	ENST00000334785.11@NEXN	ENST00000334785.11	protein_coding	77888628,77916055,77917566,77917960,77918125,77925188,77926414,77926716,77929316,77933282,77935823,77942023,77942461	77888759,77916133,77917757,77918038,77918273,77925229,77926611,77926892,77929504,77933479,77936044,77942208,77943224	Gene ID= ENSG00000162614.18 TPM= 35.26 Transcript Type= protein_coding
chr1	77888662	77935919	77888662	77935919	+	ENST00000440324.5@NEXN	ENST00000440324.5	protein_coding	77888662,77916055,77917566,77917960,77918125,77926414,77926716,77929316,77933282,77935823	77888759,77916133,77917757,77918038,77918273,77926611,77926892,77929504,77933479,77935919	Gene ID= ENSG00000162614.18 TPM= 24.7 Transcript Type= protein_coding
chr1	77889357	77892556	77889357	77892556	-	transcript5013.chr1.nnic@NA	transcript5013.chr1.nnic	NA	77889357	77892556	Gene ID= novel_gene_chr1_5014 TPM= 5.84 Transcript Type= NA
chr1	77948405	77979086	77948405	77979086	-	transcript5015.chr1.nic@FUBP1	transcript5015.chr1.nic	protein_coding	77978885,77969925,77969022,77968165,77967627,77967049,77966884,77966694,77965069,77964870,77964646,77964254,77964062,77963574,77962770,77960344,77960184,77956572,77955255,77949155,77948405	77979086,77970015,77969084,77968203,77967666,77967098,77966955,77966751,77965231,77964968,77964747,77964356,77964162,77963715,77962930,77960495,77960263,77956700,77955329,77949300,77948774	Gene ID= ENSG00000162613.16 TPM= 2.12 Transcript Type= NA
chr1	77948405	77979470	77948405	77979470	-	transcript5019.chr1.nic@FUBP1	transcript5019.chr1.nic	protein_coding	77978885,77969925,77968165,77967627,77967049,77966884,77966694,77965069,77964870,77964646,77964254,77964062,77963574,77962770,77960344,77960184,77956572,77955255,77949155,77948405	77979470,77970015,77968203,77967666,77967098,77966955,77966751,77965231,77964968,77964747,77964356,77964162,77963715,77962930,77960495,77960263,77956700,77955329,77949300,77948774	Gene ID= ENSG00000162613.16 TPM= 21.24 Transcript Type= NA
chr1	77948405	77979086	77948405	77979086	-	ENST00000370768.6@FUBP1	ENST00000370768.6	protein_coding	77978885,77969925,77968165,77967627,77967049,77966884,77966694,77965069,77964870,77964646,77964254,77964062,77963574,77962770,77960344,77960184,77956572,77955255,77949155,77948405	77979086,77970015,77968203,77967666,77967101,77966955,77966751,77965231,77964968,77964747,77964356,77964162,77963715,77962930,77960495,77960263,77956700,77955329,77949300,77948774	Gene ID= ENSG00000162613.16 TPM= 74.35 Transcript Type= protein_coding
chr1	77948075	77948641	77948075	77948641	+	transcript5051.chr1.nnic@NA	transcript5051.chr1.nnic	NA	77948075	77948641	Gene ID= novel_gene_chr1_5052 TPM= 10.62 Transcript Type= NA
chr1	78004854	78017964	78004854	78017964	+	ENST00000370763.5@DNAJB4	ENST00000370763.5	protein_coding	78004854,78013051,78016014	78005321,78013619,78017964	Gene ID= ENSG00000162616.8 TPM= 43.55 Transcript Type= protein_coding
chr1	78004192	78007585	78004192	78007585	+	transcript5053.chr1.nnic@NA	transcript5053.chr1.nnic	NA	78004192	78007585	Gene ID= novel_gene_chr1_5054 TPM= 2.12 Transcript Type= NA
chr1	78024566	78025168	78024566	78025168	+	transcript5049.chr1.nnic@NA	transcript5049.chr1.nnic	NA	78024566	78025168	Gene ID= novel_gene_chr1_5050 TPM= 3.19 Transcript Type= NA
chr1	78045905	78093369	78045905	78093369	+	transcript5060.chr1.nic@GIPC2	transcript5060.chr1.nic	protein_coding	78045905,78080675,78092757	78046334,78080860,78093369	Gene ID= ENSG00000137960.5 TPM= 3.19 Transcript Type= NA
chr1	78649831	78664078	78649831	78664078	+	ENST00000370747.8@IFI44	ENST00000370747.8	protein_coding	78649831,78650186,78654243,78655014,78655362,78659312,78660554,78662704,78663765	78649905,78650652,78654279,78655209,78655511,78659483,78660654,78662878,78664078	Gene ID= ENSG00000137965.10 TPM= 1.06 Transcript Type= protein_coding
chr1	83911237	83999187	83911237	83999187	-	transcript5080.chr1.nic@TTLL7	transcript5080.chr1.nic	protein_coding	83998931,83952187,83951845,83949865,83948628,83947124,83942463,83937852,83933608,83929136,83921247,83921087,83919699,83917604,83911237	83999187,83952387,83951976,83949986,83948695,83947282,83942679,83938016,83933766,83929230,83921394,83921160,83919834,83917690,83911363	Gene ID= ENSG00000137941.16 TPM= 3.19 Transcript Type= NA
chr1	83949313	83999118	83949313	83999118	-	transcript5082.chr1.nic@TTLL7	transcript5082.chr1.nic	protein_coding	83998931,83952187,83951845,83949313	83999118,83952387,83951976,83949986	Gene ID= ENSG00000137941.16 TPM= 2.12 Transcript Type= NA
chr1	83865723	83868185	83865723	83868185	-	transcript5083.chr1.nnic@NA	transcript5083.chr1.nnic	NA	83865723	83868185	Gene ID= novel_gene_chr1_5084 TPM= 2.12 Transcript Type= NA
chr1	84076331	84077931	84076331	84077931	-	ENST00000605506.1@AL359504.2	ENST00000605506.1	lincRNA	84076331	84077931	Gene ID= ENSG00000271576.1 TPM= 1.06 Transcript Type= lincRNA
chr1	84077953	84205297	84077953	84205297	+	transcript5087.chr1.nic@PRKACB	transcript5087.chr1.nic	protein_coding	84077953,84179177,84182200,84184037,84185100,84196616,84197729,84202683,84204479	84078371,84179238,84182328,84184135,84185182,84196742,84197824,84202805,84205297	Gene ID= ENSG00000142875.19 TPM= 6.37 Transcript Type= NA
chr1	84078062	84238498	84078062	84238498	+	ENST00000370689.6@PRKACB	ENST00000370689.6	protein_coding	84078062,84179177,84182200,84184037,84185100,84196616,84197729,84202683,84214153,84235180	84078371,84179238,84182328,84184135,84185182,84196742,84197824,84202805,84214317,84238498	Gene ID= ENSG00000142875.19 TPM= 32.93 Transcript Type= protein_coding
chr1	84479267	84497790	84479267	84497790	+	ENST00000370654.5@RPF1	ENST00000370654.5	protein_coding	84479267,84480956,84482915,84489633,84490319,84495373,84495882,84496244,84497429	84479509,84481012,84482995,84489728,84490472,84495455,84496063,84496370,84497790	Gene ID= ENSG00000117133.10 TPM= 2.12 Transcript Type= protein_coding
chr1	84498325	84506196	84498325	84506196	-	transcript5106.chr1.nnic@GNG5	transcript5106.chr1.nnic	protein_coding	84506011,84498325	84506196,84498548	Gene ID= ENSG00000174021.10 TPM= 6.37 Transcript Type= NA
chr1	84498325	84506565	84498325	84506565	-	ENST00000370645.8@GNG5	ENST00000370645.8	protein_coding	84506436,84506011,84501826,84498325	84506565,84506301,84501970,84498548	Gene ID= ENSG00000174021.10 TPM= 255.98 Transcript Type= protein_coding
chr1	84498325	84574456	84498325	84574456	-	transcript5093.chr1.nnic@CTBS	transcript5093.chr1.nnic	protein_coding	84574239,84570582,84569931,84565841,84563735,84563257,84501826,84498325	84574456,84570720,84570139,84566012,84563832,84563418,84501970,84498548	Gene ID= ENSG00000117151.12 TPM= 7.44 Transcript Type= NA
chr1	84549606	84574464	84549606	84574464	-	ENST00000370630.5@CTBS	ENST00000370630.5	protein_coding	84574239,84570582,84569931,84565841,84563735,84563257,84549606	84574464,84570720,84570139,84566012,84563832,84563418,84555199	Gene ID= ENSG00000117151.12 TPM= 3.19 Transcript Type= protein_coding
chr1	84553121	84574480	84553121	84574480	-	ENST00000477677.5@CTBS	ENST00000477677.5	protein_coding	84574239,84570582,84565841,84563735,84563257,84553121	84574480,84570720,84566012,84563832,84563418,84555199	Gene ID= ENSG00000117151.12 TPM= 3.19 Transcript Type= processed_transcript
chr1	84506348	84526888	84506348	84526888	+	transcript5101.chr1.nic@SPATA1	transcript5101.chr1.nic	protein_coding	84506348,84516223,84520585,84522390,84525696	84506418,84516395,84520691,84522507,84526888	Gene ID= ENSG00000122432.17 TPM= 2.12 Transcript Type= NA
chr1	84506310	84506998	84506310	84506998	+	transcript5107.chr1.nnic@NA	transcript5107.chr1.nnic	NA	84506310	84506998	Gene ID= novel_gene_chr1_5108 TPM= 3.19 Transcript Type= NA
chr1	84644956	84690481	84644956	84690481	-	transcript5120.chr1.nnic@SSX2IP	transcript5120.chr1.nnic	protein_coding	84690371,84671177,84670646,84669681,84666122,84664417,84662455,84662198,84658318,84656348,84655832,84651883,84644956	84690481,84671308,84670815,84669893,84666232,84664552,84662530,84662375,84658468,84656484,84656005,84651997,84647607	Gene ID= ENSG00000117155.16 TPM= 2.12 Transcript Type= NA
chr1	85190597	85201749	85190597	85201749	-	transcript5138.chr1.nic@SYDE2	transcript5138.chr1.nic	protein_coding	85200252,85190597	85201749,85190752	Gene ID= ENSG00000097096.8 TPM= 3.19 Transcript Type= NA
chr1	85251968	85259642	85251968	85259642	-	ENST00000471115.5@C1orf52	ENST00000471115.5	protein_coding	85259358,85258524,85251968	85259642,85258722,85252702	Gene ID= ENSG00000162642.13 TPM= 14.87 Transcript Type= protein_coding
chr1	85266248	85277090	85266248	85277090	-	ENST00000370580.5@BCL10	ENST00000370580.5	protein_coding	85276296,85270618,85266248	85277090,85270906,85267982	Gene ID= ENSG00000142867.12 TPM= 18.06 Transcript Type= protein_coding
chr1	85318485	85465140	85318485	85465140	-	ENST00000284031.12@DDAH1	ENST00000284031.12	protein_coding	85464743,85358748,85351506,85350415,85324740,85318485	85465140,85358847,85351579,85350534,85324883,85321568	Gene ID= ENSG00000153904.18 TPM= 160.39 Transcript Type= protein_coding
chr1	85464760	85465670	85464760	85465670	+	transcript5167.chr1.nnic@NA	transcript5167.chr1.nnic	NA	85464760	85465670	Gene ID= novel_gene_chr1_5168 TPM= 2.12 Transcript Type= NA
chr1	85580760	85583703	85580760	85583703	+	transcript5172.chr1.nnic@NA	transcript5172.chr1.nnic	NA	85580760	85583703	Gene ID= novel_gene_chr1_5173 TPM= 12.75 Transcript Type= NA
chr1	85580761	85583962	85580761	85583962	+	ENST00000451137.6@CYR61	ENST00000451137.6	protein_coding	85580761,85581365,85581928,85582416,85582740	85581047,85581578,85582284,85582624,85583962	Gene ID= ENSG00000142871.16 TPM= 29.74 Transcript Type= protein_coding
chr1	85628262	85708382	85628262	85708382	-	transcript5174.chr1.nnic@ZNHIT6	transcript5174.chr1.nnic	protein_coding	85707629,85706442,85706249,85706078,85702157,85680836,85678701,85677236,85657847,85653977,85628262	85708382,85706507,85706355,85706163,85702260,85680904,85678781,85677313,85657971,85654098,85629688	Gene ID= ENSG00000117174.10 TPM= 2.12 Transcript Type= NA
chr1	85652808	85708418	85652808	85708418	-	ENST00000370574.3@ZNHIT6	ENST00000370574.3	protein_coding	85707629,85706442,85706249,85706078,85702157,85680836,85678701,85677236,85657847,85652808	85708418,85706507,85706355,85706163,85702260,85680904,85678781,85677313,85657971,85654098	Gene ID= ENSG00000117174.10 TPM= 8.5 Transcript Type= protein_coding
chr1	86385728	86396323	86385728	86396323	-	ENST00000478286.2@ODF2L	ENST00000478286.2	protein_coding	86396033,86385728	86396323,86387086	Gene ID= ENSG00000122417.15 TPM= 1.06 Transcript Type= protein_coding
chr1	86358787	86383079	86358787	86383079	-	ENST00000496592.5@ODF2L	ENST00000496592.5	protein_coding	86382931,86376233,86372431,86371018,86360426,86358787	86383079,86376418,86372540,86371153,86360536,86358891	Gene ID= ENSG00000122417.15 TPM= 1.06 Transcript Type= retained_intron
chr1	86348116	86350292	86348116	86350292	-	transcript5185.chr1.nnic@NA	transcript5185.chr1.nnic	NA	86348116	86350292	Gene ID= novel_gene_chr1_5186 TPM= 2.12 Transcript Type= NA
chr1	86703501	86705340	86703501	86705340	-	transcript5207.chr1.nnic@NA	transcript5207.chr1.nnic	NA	86703501	86705340	Gene ID= novel_gene_chr1_5208 TPM= 6.37 Transcript Type= NA
chr1	86704570	86748176	86704570	86748176	+	ENST00000535010.5@SH3GLB1	ENST00000535010.5	protein_coding	86704570,86719507,86722540,86724313,86734602,86735079,86742208,86743128	86704971,86719635,86722673,86724405,86734691,86735179,86742436,86748176	Gene ID= ENSG00000097033.14 TPM= 14.87 Transcript Type= protein_coding
chr1	86704576	86748184	86704576	86748184	+	ENST00000370558.8@SH3GLB1	ENST00000370558.8	protein_coding	86704576,86715724,86719507,86722540,86724313,86734602,86735079,86742208,86743128	86704971,86715865,86719635,86722673,86724405,86734691,86735179,86742436,86748184	Gene ID= ENSG00000097033.14 TPM= 36.11 Transcript Type= protein_coding
chr1	86862447	86914424	86862447	86914424	-	ENST00000611507.4@SELENOF	ENST00000611507.4	protein_coding	86914028,86903281,86880693,86880662,86862447	86914424,86903448,86880725,86880689,86863605	Gene ID= ENSG00000183291.15 TPM= 1.06 Transcript Type= protein_coding
chr1	86862445	86914365	86862445	86914365	-	ENST00000331835.9@SELENOF	ENST00000331835.9	protein_coding	86914028,86903281,86880662,86868053,86862445	86914365,86903448,86880725,86868102,86863605	Gene ID= ENSG00000183291.15 TPM= 13.81 Transcript Type= protein_coding
chr1	86862725	86914134	86862725	86914134	-	ENST00000370554.5@SELENOF	ENST00000370554.5	protein_coding	86914028,86903281,86880662,86862725	86914134,86903448,86880725,86863605	Gene ID= ENSG00000183291.15 TPM= 5.31 Transcript Type= protein_coding
chr1	86914648	87098445	86914648	87098445	+	ENST00000370551.8@HS2ST1	ENST00000370551.8	protein_coding	86914648,87072934,87084194,87092531,87097838	86915160,87073172,87084279,87092669,87098445	Gene ID= ENSG00000153936.16 TPM= 3.19 Transcript Type= protein_coding
chr1	86914674	87109998	86914674	87109998	+	ENST00000370550.9@HS2ST1	ENST00000370550.9	protein_coding	86914674,87072934,87084194,87092531,87097838,87103432,87104470	86915160,87073172,87084279,87092669,87097935,87103589,87109998	Gene ID= ENSG00000153936.16 TPM= 5.31 Transcript Type= protein_coding
chr1	86923400	86925421	86923400	86925421	-	transcript5223.chr1.nnic@NA	transcript5223.chr1.nnic	NA	86923400	86925421	Gene ID= novel_gene_chr1_5224 TPM= 3.19 Transcript Type= NA
chr1	87129774	87169198	87129774	87169198	+	ENST00000490006.6@LINC01140	ENST00000490006.6	lincRNA	87129774,87133614,87168136	87129994,87133718,87169198	Gene ID= ENSG00000267272.5 TPM= 9.56 Transcript Type= lincRNA
chr1	87129854	87134469	87129854	87134469	+	ENST00000471417.5@LINC01140	ENST00000471417.5	lincRNA	87129854,87133614,87133965	87129994,87133718,87134469	Gene ID= ENSG00000267272.5 TPM= 1.06 Transcript Type= lincRNA
chr1	87328468	87348923	87328468	87348923	+	ENST00000370544.9@LMO4	ENST00000370544.9	protein_coding	87328468,87332013,87339536,87340047,87344788	87329244,87332251,87339632,87340202,87348923	Gene ID= ENSG00000143013.12 TPM= 3.19 Transcript Type= protein_coding
chr1	88684222	88836255	88684222	88836255	+	ENST00000370521.7@PKN2	ENST00000370521.7	protein_coding	88684222,88740988,88760222,88770352,88771421,88771663,88784639,88786104,88804391,88804846,88805497,88805891,88807313,88807529,88807684,88813557,88821941,88824310,88828481,88832744,88833077,88833245	88684628,88741288,88760376,88770469,88771566,88771879,88784824,88786213,88804534,88804921,88805671,88806017,88807443,88807604,88807775,88813733,88822003,88824386,88828623,88832851,88833157,88836255	Gene ID= ENSG00000065243.19 TPM= 10.62 Transcript Type= protein_coding
chr1	88852932	88891618	88852932	88891618	-	ENST00000370500.9@GTF2B	ENST00000370500.9	protein_coding	88891483,88887261,88863981,88860140,88859882,88857206,88852932	88891618,88887367,88864114,88860286,88860011,88857487,88853346	Gene ID= ENSG00000137947.11 TPM= 24.43 Transcript Type= protein_coding
chr1	88935773	88992776	88935773	88992776	-	ENST00000370491.7@KYAT3	ENST00000370491.7	protein_coding	88992585,88969409,88968670,88964829,88962059,88961381,88961167,88955149,88953063,88949091,88943350,88943005,88935773	88992776,88969467,88968814,88964978,88962145,88961506,88961287,88955225,88953152,88949277,88943423,88943091,88936245	Gene ID= ENSG00000137944.17 TPM= 2.12 Transcript Type= protein_coding
chr1	88935816	88992921	88935816	88992921	-	ENST00000260508.8@KYAT3	ENST00000260508.8	protein_coding	88992585,88988252,88969409,88968670,88964829,88962059,88961381,88961167,88955149,88953063,88949091,88943350,88943005,88935816	88992921,88988351,88969467,88968814,88964978,88962145,88961506,88961287,88955225,88953152,88949277,88943423,88943091,88936245	Gene ID= ENSG00000137944.17 TPM= 5.31 Transcript Type= protein_coding
chr1	88979459	88992960	88979459	88992960	-	ENST00000399794.6@RBMXL1	ENST00000399794.6	protein_coding	88992585,88988252,88979459	88992960,88988351,88984066	Gene ID= ENSG00000213516.9 TPM= 17.53 Transcript Type= protein_coding
chr1	88979456	88992772	88979456	88992772	-	ENST00000321792.5@RBMXL1	ENST00000321792.5	protein_coding	88992585,88979456	88992772,88984066	Gene ID= ENSG00000213516.9 TPM= 17.53 Transcript Type= protein_coding
chr1	89006666	89022882	89006666	89022882	-	ENST00000370481.8@GBP3	ENST00000370481.8	protein_coding	89022684,89020532,89015287,89014547,89014083,89013185,89011747,89010904,89009392,89008947,89006666	89022882,89020743,89015414,89014656,89014279,89013427,89012027,89011116,89009494,89009140,89007852	Gene ID= ENSG00000117226.11 TPM= 2.12 Transcript Type= protein_coding
chr1	89007769	89022838	89007769	89022838	-	ENST00000235878.5@GBP3	ENST00000235878.5	protein_coding	89022684,89020532,89015287,89014405,89014083,89013185,89011747,89010904,89009392,89008947,89007769	89022838,89020743,89015414,89014656,89014279,89013427,89012027,89011116,89009494,89009140,89007852	Gene ID= ENSG00000117226.11 TPM= 1.06 Transcript Type= nonsense_mediated_decay
chr1	89052319	89065360	89052319	89065360	-	ENST00000370473.4@GBP1	ENST00000370473.4	protein_coding	89065160,89063045,89060197,89059317,89058841,89057992,89056854,89056016,89055113,89054682,89052319	89065360,89063253,89060324,89059426,89059043,89058234,89057134,89056228,89055215,89054875,89053468	Gene ID= ENSG00000117228.9 TPM= 2.12 Transcript Type= protein_coding
chr1	89182482	89198918	89182482	89198918	-	transcript5267.chr1.nnic@GBP4	transcript5267.chr1.nnic	protein_coding	89198795,89197110,89195297,89193303,89192904,89191261,89190038,89188582,89187000,89186333,89185237,89182482	89198918,89197304,89195424,89193412,89193100,89191506,89190318,89188794,89187102,89186526,89185469,89183872	Gene ID= ENSG00000162654.8 TPM= 3.19 Transcript Type= NA
chr1	89181148	89198932	89181148	89198932	-	ENST00000355754.6@GBP4	ENST00000355754.6	protein_coding	89198795,89197110,89195297,89193303,89192904,89191261,89190038,89188582,89187000,89186333,89181148	89198932,89197304,89195424,89193412,89193100,89191506,89190318,89188794,89187102,89186526,89185469	Gene ID= ENSG00000162654.8 TPM= 2.12 Transcript Type= protein_coding
chr1	89633072	89719533	89633072	89719533	+	ENST00000370454.8@LRRC8C	ENST00000370454.8	protein_coding	89633072,89686470,89712709	89633322,89686611,89719533	Gene ID= ENSG00000171488.14 TPM= 5.31 Transcript Type= protein_coding
chr1	89687854	89689949	89687854	89689949	+	transcript5277.chr1.nnic@NA	transcript5277.chr1.nnic	NA	89687854	89689949	Gene ID= novel_gene_chr1_5278 TPM= 2.12 Transcript Type= NA
chr1	89995115	90028538	89995115	90028538	+	ENST00000340281.8@ZNF326	ENST00000340281.8	protein_coding	89995115,89998110,90005003,90005133,90007345,90010088,90013126,90017317,90018685,90020792,90022250,90027354	89995273,89998154,90005038,90005244,90007750,90010286,90013237,90017464,90018784,90020922,90022345,90028538	Gene ID= ENSG00000162664.16 TPM= 1.06 Transcript Type= protein_coding
chr1	90782983	90851657	90782983	90851657	-	ENST00000635581.1@AL590094.1	ENST00000635581.1	processed_transcript	90851483,90789398,90782983	90851657,90789487,90783423	Gene ID= ENSG00000233593.8 TPM= 4.25 Transcript Type= lincRNA
chr1	91500893	91525764	91500893	91525764	+	ENST00000234626.10@CDC7	ENST00000234626.10	protein_coding	91500893,91501654,91507854,91508262,91511597,91511781,91513058,91513948,91514819,91515794,91520130,91524041	91500948,91501831,91507937,91508397,91511690,91511923,91513307,91514043,91514997,91515876,91520279,91525764	Gene ID= ENSG00000097046.12 TPM= 1.06 Transcript Type= protein_coding
chr1	91680345	91886279	91680345	91886279	-	ENST00000212355.8@TGFBR3	ENST00000212355.8	protein_coding	91885878,91861471,91797287,91758613,91734776,91729805,91727659,91721955,91719893,91719312,91716568,91716236,91712243,91708663,91698089,91695672,91680345	91886279,91861644,91797471,91758750,91734959,91729973,91727806,91722144,91720230,91719464,91716708,91716394,91712542,91708783,91698130,91695779,91683857	Gene ID= ENSG00000069702.10 TPM= 4.25 Transcript Type= protein_coding
chr1	91714642	91717699	91714642	91717699	+	transcript5312.chr1.nnic@NA	transcript5312.chr1.nnic	NA	91714642	91717699	Gene ID= novel_gene_chr1_5313 TPM= 2.12 Transcript Type= NA
chr1	91830585	91833314	91830585	91833314	+	transcript5316.chr1.nnic@NA	transcript5316.chr1.nnic	NA	91830585	91833314	Gene ID= novel_gene_chr1_5317 TPM= 2.12 Transcript Type= NA
chr1	91853788	91856111	91853788	91856111	+	transcript5314.chr1.nnic@NA	transcript5314.chr1.nnic	NA	91853788	91856111	Gene ID= novel_gene_chr1_5315 TPM= 2.12 Transcript Type= NA
chr1	92029982	92063536	92029982	92063536	+	ENST00000370383.4@EPHX4	ENST00000370383.4	protein_coding	92029982,92032505,92042823,92045532,92050317,92052510,92063055	92030310,92032590,92042980,92045660,92050420,92052658,92063536	Gene ID= ENSG00000172031.6 TPM= 1.06 Transcript Type= protein_coding
chr1	92080305	92184725	92080305	92184725	+	ENST00000636805.1@AC104836.1	ENST00000636805.1	protein_coding	92080305,92088698,92102473,92107884,92129687,92139350,92141115,92147180,92147684,92166958,92167848,92168866,92171399,92176829,92177811,92178312,92180265,92183864	92080720,92088895,92102669,92108001,92129776,92139430,92141211,92147268,92147786,92167140,92167985,92168995,92171460,92177546,92177898,92178451,92182595,92184725	Gene ID= ENSG00000189195.11 TPM= 1.06 Transcript Type= protein_coding
chr1	92246402	92298976	92246402	92298976	-	ENST00000370360.7@GLMN	ENST00000370360.7	protein_coding	92298925,92297961,92297404,92291418,92290198,92288914,92286490,92271465,92269723,92268105,92267913,92266700,92266419,92264554,92263623,92262863,92247878,92247062,92246402	92298976,92298029,92297529,92291537,92290306,92289151,92286592,92271652,92269776,92268135,92268002,92266741,92266492,92264638,92263732,92262926,92247989,92247144,92246646	Gene ID= ENSG00000174842.16 TPM= 3.19 Transcript Type= protein_coding
chr1	92298965	92402056	92298965	92402056	+	ENST00000610020.1@RPAP2	ENST00000610020.1	protein_coding	92298965,92300194,92301476,92303977,92304284,92307188,92320599,92323445,92333391,92336347,92345846,92380724,92387011	92299146,92300239,92301590,92304075,92304349,92307276,92320634,92324375,92333473,92336427,92345914,92380873,92402056	Gene ID= ENSG00000122484.8 TPM= 4.25 Transcript Type= protein_coding
chr1	92512470	92785108	92512470	92785108	-	transcript5334.chr1.nnic@EVI5	transcript5334.chr1.nnic	protein_coding	92784836,92736398,92704555,92703395,92702141,92697860,92695310,92694299,92693802,92677158,92665939,92663420,92662719,92636202,92625794,92624176,92607581,92605307,92563642,92512470	92785108,92736627,92704744,92703619,92702215,92697985,92695453,92694388,92693899,92677218,92665992,92663452,92662865,92636336,92625934,92624334,92607727,92605402,92563737,92513970	Gene ID= ENSG00000067208.14 TPM= 3.19 Transcript Type= NA
chr1	92706958	92710098	92706958	92710098	+	transcript5338.chr1.nnic@NA	transcript5338.chr1.nnic	NA	92706958	92710098	Gene ID= novel_gene_chr1_5339 TPM= 6.37 Transcript Type= NA
chr1	92832020	92840609	92832020	92840609	+	transcript5341.chr1.nic@RPL5	transcript5341.chr1.nic	protein_coding	92832020,92833389,92833545,92834779,92836190,92837456,92840551	92832117,92833458,92833660,92834913,92836392,92837633,92840609	Gene ID= ENSG00000122406.12 TPM= 4.25 Transcript Type= NA
chr1	92832025	92841924	92832025	92841924	+	ENST00000370321.7@RPL5	ENST00000370321.7	protein_coding	92832025,92833389,92833545,92834779,92836190,92837456,92840551,92841766	92832117,92833458,92833660,92834913,92836392,92837633,92840639,92841924	Gene ID= ENSG00000122406.12 TPM= 195.44 Transcript Type= protein_coding
chr1	92842167	92961500	92842167	92961500	-	ENST00000370310.4@FAM69A	ENST00000370310.4	protein_coding	92961376,92876296,92850848,92847183,92842167	92961500,92876430,92850955,92847359,92844195	Gene ID= ENSG00000154511.11 TPM= 14.87 Transcript Type= protein_coding
chr1	93079238	93139081	93079238	93139081	+	ENST00000370298.8@MTF2	ENST00000370298.8	protein_coding	93079238,93110230,93110545,93114688,93114988,93115470,93118345,93119333,93120549,93127232,93129278,93133703,93133928,93134091,93136670	93079531,93110428,93110626,93114783,93115088,93115618,93118440,93119401,93120672,93127299,93129448,93133808,93133980,93134195,93139081	Gene ID= ENSG00000143033.17 TPM= 2.12 Transcript Type= protein_coding
chr1	93079235	93139079	93079235	93139079	+	ENST00000545708.5@MTF2	ENST00000545708.5	protein_coding	93079235,93110230,93110327,93110545,93114688,93114988,93115470,93118345,93119333,93120549,93127232,93129278,93133703,93133928,93134091,93136670	93079531,93110246,93110428,93110626,93114783,93115088,93115618,93118440,93119401,93120672,93127299,93129448,93133808,93133980,93134195,93139079	Gene ID= ENSG00000143033.17 TPM= 1.59 Transcript Type= protein_coding
chr1	93079235	93139079	93079235	93139079	+	ENST00000540243.5@MTF2	ENST00000540243.5	protein_coding	93079235,93114688,93114988,93115470,93118345,93119333,93120549,93127232,93129278,93133703,93133928,93134091,93136670	93079531,93114783,93115088,93115618,93118440,93119401,93120672,93127299,93129448,93133808,93133980,93134195,93139079	Gene ID= ENSG00000143033.17 TPM= 1.59 Transcript Type= protein_coding
chr1	93079246	93113233	93079246	93113233	+	transcript5359.chr1.nic@MTF2	transcript5359.chr1.nic	protein_coding	93079246,93110230,93110545	93079531,93110428,93113233	Gene ID= ENSG00000143033.17 TPM= 2.12 Transcript Type= NA
chr1	93151858	93180516	93151858	93180516	-	ENST00000370290.7@TMED5	ENST00000370290.7	protein_coding	93180054,93160129,93158815,93156300,93151858	93180516,93160226,93158885,93156483,93154888	Gene ID= ENSG00000117500.12 TPM= 7.44 Transcript Type= nonsense_mediated_decay
chr1	93149742	93180728	93149742	93180728	-	ENST00000370282.7@TMED5	ENST00000370282.7	protein_coding	93180054,93160129,93156300,93149742	93180728,93160226,93156483,93154888	Gene ID= ENSG00000117500.12 TPM= 42.49 Transcript Type= protein_coding
chr1	93155533	93180398	93155533	93180398	-	transcript5367.chr1.nic@TMED5	transcript5367.chr1.nic	protein_coding	93180054,93160129,93158815,93155533	93180398,93160226,93158885,93156483	Gene ID= ENSG00000117500.12 TPM= 2.12 Transcript Type= NA
chr1	93158455	93180470	93158455	93180470	-	transcript5372.chr1.nic@TMED5	transcript5372.chr1.nic	protein_coding	93180054,93160129,93158455	93180470,93160226,93158885	Gene ID= ENSG00000117500.12 TPM= 2.12 Transcript Type= NA
chr1	93345888	93369498	93345888	93369498	+	ENST00000370272.8@DR1	ENST00000370272.8	protein_coding	93345888,93353908,93360493	93346865,93354071,93369498	Gene ID= ENSG00000117505.12 TPM= 55.23 Transcript Type= protein_coding
chr1	93561791	93681829	93561791	93681829	-	ENST00000260502.10@BCAR3	ENST00000260502.10	protein_coding	93681598,93674614,93642304,93592265,93588977,93584018,93582301,93576014,93571670,93567740,93567279,93561791	93681829,93674941,93642343,93592393,93589419,93584121,93582953,93576129,93571841,93567851,93567491,93562419	Gene ID= ENSG00000137936.16 TPM= 3.19 Transcript Type= protein_coding
chr1	93561786	93614097	93561786	93614097	-	ENST00000370247.7@BCAR3	ENST00000370247.7	protein_coding	93613847,93592265,93588977,93584018,93582301,93576014,93571670,93567740,93567279,93561786	93614097,93592393,93589419,93584121,93582953,93576129,93571841,93567851,93567491,93562419	Gene ID= ENSG00000137936.16 TPM= 2.12 Transcript Type= protein_coding
chr1	93569604	93571215	93569604	93571215	+	transcript5389.chr1.nnic@NA	transcript5389.chr1.nnic	NA	93569604	93571215	Gene ID= novel_gene_chr1_5390 TPM= 2.12 Transcript Type= NA
chr1	93866283	93879206	93866283	93879206	-	ENST00000436063.6@DNTTIP2	ENST00000436063.6	protein_coding	93879077,93876268,93875645,93873119,93872072,93870683,93866283	93879206,93877862,93875783,93873214,93872236,93870792,93869944	Gene ID= ENSG00000067334.13 TPM= 3.19 Transcript Type= protein_coding
chr1	94201779	94237636	94201779	94237636	-	transcript5424.chr1.nic@ARHGAP29	transcript5424.chr1.nic	protein_coding	94237415,94231407,94220258,94209254,94208832,94205635,94205061,94203930,94203100,94202918,94202544,94201779	94237636,94231643,94220392,94209350,94208904,94205683,94205198,94203994,94203210,94202998,94202732,94201857	Gene ID= ENSG00000137962.12 TPM= 5.31 Transcript Type= NA
chr1	94201895	94237633	94201895	94237633	-	ENST00000370217.3@ARHGAP29	ENST00000370217.3	protein_coding	94237415,94231407,94220258,94209254,94208832,94205635,94205061,94203930,94203100,94202918,94201895	94237633,94231643,94220392,94209350,94208904,94205683,94205198,94203994,94203210,94202998,94202732	Gene ID= ENSG00000137962.12 TPM= 7.44 Transcript Type= protein_coding
chr1	94203100	94247729	94203100	94247729	-	transcript5430.chr1.nnic@ARHGAP29	transcript5430.chr1.nnic	protein_coding	94247565,94231407,94220258,94209254,94208832,94205635,94205061,94203930,94203100	94247729,94231643,94220392,94209350,94208904,94205683,94205198,94203994,94203210	Gene ID= ENSG00000137962.12 TPM= 2.12 Transcript Type= NA
chr1	94232934	94237582	94232934	94237582	-	transcript5434.chr1.nnic@NA	transcript5434.chr1.nnic	NA	94232934	94237582	Gene ID= novel_gene_chr1_5435 TPM= 2.12 Transcript Type= NA
chr1	94418368	94518663	94418368	94518663	+	transcript5440.chr1.nnic@ABCD3	transcript5440.chr1.nnic	protein_coding	94418368,94458607,94464775,94467919,94472173,94475143,94475614,94478259,94480464,94483170,94487542,94487694,94487892,94489725,94489903,94491184,94498602,94498783,94498945,94499495,94506538,94515146,94517052	94418588,94458643,94464873,94468007,94472242,94475240,94475737,94478315,94480606,94483239,94487611,94487791,94487983,94489816,94489975,94491247,94498679,94498848,94499034,94499614,94506642,94515202,94518663	Gene ID= ENSG00000117528.11 TPM= 6.9 Transcript Type= NA
chr1	94418404	94518496	94418404	94518496	+	transcript5445.chr1.nnic@ABCD3	transcript5445.chr1.nnic	protein_coding	94418404,94464775,94467919,94473766,94475143,94475614,94478259,94480464,94483170,94487542,94487694,94487892,94489725,94489903,94491184,94498602,94498783,94498945,94499495,94506538,94515146,94517052	94418588,94464873,94468007,94473835,94475240,94475737,94478315,94480606,94483239,94487611,94487791,94487983,94489816,94489975,94491247,94498679,94498848,94499034,94499614,94506642,94515202,94518496	Gene ID= ENSG00000117528.11 TPM= 3.19 Transcript Type= NA
chr1	94418368	94518496	94418368	94518496	+	transcript5448.chr1.nnic@ABCD3	transcript5448.chr1.nnic	protein_coding	94418368,94458607,94464775,94467919,94473766,94475143,94475614,94478259,94480464,94489725,94489903,94491184,94498602,94498783,94498945,94499495,94506538,94515146,94517052	94418588,94458643,94464873,94468007,94473835,94475240,94475737,94478315,94480606,94489816,94489975,94491247,94498679,94498848,94499034,94499614,94506642,94515202,94518496	Gene ID= ENSG00000117528.11 TPM= 2.12 Transcript Type= NA
chr1	94418455	94518663	94418455	94518663	+	ENST00000370214.8@ABCD3	ENST00000370214.8	protein_coding	94418455,94458607,94464775,94467919,94473766,94475143,94475614,94478259,94480464,94483170,94487542,94487694,94487892,94489725,94489903,94491184,94498602,94498783,94498945,94499495,94506538,94515146,94517052	94418588,94458643,94464873,94468007,94473835,94475240,94475737,94478315,94480606,94483239,94487611,94487791,94487983,94489816,94489975,94491247,94498679,94498848,94499034,94499614,94506642,94515202,94518663	Gene ID= ENSG00000117528.11 TPM= 6.9 Transcript Type= protein_coding
chr1	94529225	94541800	94529225	94541800	-	ENST00000334047.11@F3	ENST00000334047.11	protein_coding	94541537,94540257,94535965,94533090,94532321,94529225	94541800,94540368,94536164,94533268,94532480,94530596	Gene ID= ENSG00000117525.13 TPM= 1.06 Transcript Type= protein_coding
chr1	94896951	94927278	94896951	94927278	-	ENST00000370206.8@CNN3	ENST00000370206.8	protein_coding	94926838,94903403,94903122,94902121,94901669,94899371,94896951	94927278,94903524,94903188,94902258,94901785,94899517,94898083	Gene ID= ENSG00000117519.15 TPM= 198.62 Transcript Type= protein_coding
chr1	94914894	94917173	94914894	94917173	-	transcript5479.chr1.nnic@NA	transcript5479.chr1.nnic	NA	94914894	94917173	Gene ID= novel_gene_chr1_5480 TPM= 2.12 Transcript Type= NA
chr1	94927308	94963270	94927308	94963270	+	transcript5474.chr1.nic@AC105942.1	transcript5474.chr1.nic	antisense_RNA	94927308,94931872,94961317,94962979	94928402,94931985,94961433,94963270	Gene ID= ENSG00000235501.5 TPM= 4.25 Transcript Type= NA
chr1	94927370	94963270	94927370	94963270	+	transcript5476.chr1.nic@AC105942.1	transcript5476.chr1.nic	antisense_RNA	94927370,94931872,94962979	94928402,94931985,94963270	Gene ID= ENSG00000235501.5 TPM= 3.19 Transcript Type= NA
chr1	95116881	95194949	95116881	95194949	+	transcript5493.chr1.nnic@TMEM56	transcript5493.chr1.nnic	protein_coding	95116881,95143891,95148702,95150208,95151325,95173816,95191550	95117071,95144056,95148791,95150266,95151419,95173889,95194949	Gene ID= ENSG00000152078.9 TPM= 2.12 Transcript Type= NA
chr1	95117381	95247215	95117381	95247215	+	transcript5500.chr1.nnic@TMEM56	transcript5500.chr1.nnic	protein_coding	95117381,95143891,95148702,95150208,95151325,95173816,95246756	95117617,95144056,95148791,95150266,95151419,95173889,95247215	Gene ID= ENSG00000152078.9 TPM= 2.12 Transcript Type= NA
chr1	95117343	95195400	95117343	95195400	+	transcript5505.chr1.nic@TMEM56	transcript5505.chr1.nic	protein_coding	95117343,95143891,95148702,95150208,95151325,95173816,95191550	95118091,95144056,95148791,95150266,95151419,95173889,95195400	Gene ID= ENSG00000152078.9 TPM= 2.66 Transcript Type= NA
chr1	95117338	95197607	95117338	95197607	+	ENST00000370203.8@TMEM56	ENST00000370203.8	protein_coding	95117338,95143891,95148702,95150208,95151325,95173816,95191550	95117617,95144056,95148791,95150266,95151419,95173889,95197607	Gene ID= ENSG00000152078.9 TPM= 16.99 Transcript Type= protein_coding
chr1	95139457	95141398	95139457	95141398	-	transcript5531.chr1.nnic@NA	transcript5531.chr1.nnic	NA	95139457	95141398	Gene ID= novel_gene_chr1_5532 TPM= 9.56 Transcript Type= NA
chr1	95233180	95234240	95233180	95234240	-	transcript5533.chr1.nnic@NA	transcript5533.chr1.nnic	NA	95233180	95234240	Gene ID= novel_gene_chr1_5534 TPM= 2.12 Transcript Type= NA
chr1	95234155	95247225	95234155	95247225	+	ENST00000370202.4@RWDD3	ENST00000370202.4	protein_coding	95234155,95244211,95246542,95246756	95234315,95244698,95246657,95247225	Gene ID= ENSG00000122481.16 TPM= 7.44 Transcript Type= protein_coding
chr1	95234190	95247223	95234190	95247223	+	transcript5526.chr1.nnic@RWDD3	transcript5526.chr1.nnic	protein_coding	95234190,95246542,95246756	95234315,95246657,95247223	Gene ID= ENSG00000122481.16 TPM= 9.56 Transcript Type= NA
chr1	95234211	95247223	95234211	95247223	+	ENST00000263893.10@RWDD3	ENST00000263893.10	protein_coding	95234211,95244211,95246756	95234315,95244715,95247223	Gene ID= ENSG00000122481.16 TPM= 1.06 Transcript Type= protein_coding
chr1	95234221	95247217	95234221	95247217	+	ENST00000495272.5@RWDD3	ENST00000495272.5	protein_coding	95234221,95239777,95244211,95246542,95246756	95234315,95239909,95244698,95246657,95247217	Gene ID= ENSG00000122481.16 TPM= 1.06 Transcript Type= processed_transcript
chr1	95234268	95247220	95234268	95247220	+	ENST00000473397.1@RWDD3	ENST00000473397.1	protein_coding	95234268,95246756	95234315,95247220	Gene ID= ENSG00000122481.16 TPM= 2.12 Transcript Type= processed_transcript
chr1	96721783	96823738	96721783	96823738	+	ENST00000609116.5@PTBP2	ENST00000609116.5	protein_coding	96721783,96723564,96751425,96769703,96770708,96777585,96777836,96785059,96804800,96806419,96806866,96812712,96813029,96813273	96721872,96723594,96751500,96769875,96770851,96777749,96777946,96785254,96804939,96806452,96806958,96812928,96813106,96823738	Gene ID= ENSG00000117569.18 TPM= 3.19 Transcript Type= protein_coding
chr1	96721822	96814793	96721822	96814793	+	ENST00000426398.2@PTBP2	ENST00000426398.2	protein_coding	96721822,96723564,96751425,96769703,96770708,96777585,96777836,96785059,96804800,96806419,96806866,96812712,96813029,96813276	96721872,96723594,96751500,96769875,96770851,96777749,96777946,96785254,96804939,96806452,96806958,96812928,96813106,96814793	Gene ID= ENSG00000117569.18 TPM= 2.66 Transcript Type= protein_coding
chr1	96721810	96814793	96721810	96814793	+	ENST00000370198.5@PTBP2	ENST00000370198.5	protein_coding	96721810,96723564,96751425,96769703,96770708,96777585,96777836,96785059,96804785,96806419,96806866,96812712,96813029,96813276	96721872,96723594,96751500,96769875,96770851,96777749,96777946,96785254,96804939,96806452,96806958,96812928,96813106,96814793	Gene ID= ENSG00000117569.18 TPM= 2.66 Transcript Type= protein_coding
chr1	97549072	97921047	97549072	97921047	-	transcript5544.chr1.nic@DPYD	transcript5544.chr1.nic	protein_coding	97920884,97883264,97828114,97740392,97721510,97699351,97691717,97679095,97595059,97593218,97573760,97549072	97921047,97883374,97828196,97740479,97721671,97699547,97691798,97679182,97595166,97593387,97573970,97549744	Gene ID= ENSG00000188641.12 TPM= 2.12 Transcript Type= NA
chr1	97719758	97921049	97719758	97921049	-	ENST00000306031.5@DPYD	ENST00000306031.5	protein_coding	97920884,97883264,97828114,97740392,97721510,97719758	97921049,97883374,97828196,97740479,97721671,97720926	Gene ID= ENSG00000188641.12 TPM= 3.19 Transcript Type= protein_coding
chr1	97826834	97921047	97826834	97921047	-	transcript5547.chr1.nic@DPYD	transcript5547.chr1.nic	protein_coding	97920884,97883264,97826834	97921047,97883374,97828196	Gene ID= ENSG00000188641.12 TPM= 3.19 Transcript Type= NA
chr1	97077743	97921023	97077743	97921023	-	ENST00000370192.7@DPYD	ENST00000370192.7	protein_coding	97920884,97883264,97828114,97740392,97721510,97699351,97691717,97679095,97595059,97593218,97573760,97549560,97515726,97450059,97382393,97373561,97306177,97305259,97234852,97193069,97098489,97082330,97077743	97921023,97883374,97828196,97740479,97721671,97699547,97691798,97679182,97595166,97593387,97573970,97549744,97515941,97450223,97382461,97373644,97306297,97305378,97234994,97193248,97098632,97082470,97079146	Gene ID= ENSG00000188641.12 TPM= 6.37 Transcript Type= protein_coding
chr1	98661723	98760500	98661723	98760500	+	ENST00000306121.7@SNX7	ENST00000306121.7	protein_coding	98661723,98684885,98691075,98691535,98695518,98698706,98701817,98738237,98760054	98661911,98685067,98691185,98691699,98695716,98698905,98701903,98738389,98760500	Gene ID= ENSG00000162627.16 TPM= 59.48 Transcript Type= protein_coding
chr1	99645943	99694541	99645943	99694541	+	ENST00000263174.8@PALMD	ENST00000263174.8	protein_coding	99645943,99662319,99667642,99686676,99686930,99687076,99688775,99694019	99646362,99662399,99667766,99686790,99686963,99687189,99689872,99694541	Gene ID= ENSG00000099260.10 TPM= 9.56 Transcript Type= protein_coding
chr1	99708703	99765793	99708703	99765793	-	ENST00000287474.9@FRRS1	ENST00000287474.9	protein_coding	99765297,99748897,99748573,99747294,99742179,99740793,99738086,99729650,99728493,99719534,99717410,99715586,99712418,99712105,99710834,99709198,99708703	99765793,99749001,99748768,99747430,99742273,99740940,99738268,99729748,99728640,99719647,99717525,99715672,99712515,99712163,99710949,99709259,99709120	Gene ID= ENSG00000156869.12 TPM= 1.06 Transcript Type= protein_coding
chr1	99850106	99912479	99850106	99912479	+	transcript5567.chr1.nic@AGL	transcript5567.chr1.nic	protein_coding	99850106,99850975,99861503,99862257,99864386,99870400,99870758,99874687,99875154,99875358,99876458,99877641,99879923,99880632,99881076,99881292,99881541,99884120,99884339,99884569,99887978,99891220,99891606,99892432,99896286,99900636,99902683,99910712,99912405	99850415,99851124,99861713,99862423,99864589,99870581,99870869,99874810,99875256,99875455,99876597,99877828,99880046,99880795,99881177,99881447,99881691,99884244,99884451,99884703,99888108,99891356,99891739,99892607,99896388,99900861,99902794,99910847,99912479	Gene ID= ENSG00000162688.16 TPM= 2.66 Transcript Type= NA
chr1	99850084	99924020	99850084	99924020	+	ENST00000361915.7@AGL	ENST00000361915.7	protein_coding	99850084,99850975,99861503,99862257,99864386,99870400,99870758,99874687,99875154,99875358,99876458,99877641,99879923,99880632,99881076,99881292,99881541,99884120,99884339,99884569,99887978,99891220,99891606,99892432,99896286,99900636,99902683,99910712,99912405,99913527,99915389,99916410,99916598,99921534	99850415,99851124,99861713,99862423,99864589,99870581,99870869,99874810,99875256,99875455,99876597,99877828,99880046,99880795,99881177,99881447,99881691,99884244,99884451,99884703,99888108,99891356,99891739,99892607,99896388,99900861,99902794,99910847,99912517,99913738,99915486,99916497,99916731,99924020	Gene ID= ENSG00000162688.16 TPM= 19.65 Transcript Type= protein_coding
chr1	99969561	100035637	99969561	100035637	+	ENST00000533028.7@SLC35A3	ENST00000533028.7	protein_coding	99969561,99993537,99999261,100007034,100011365,100015302,100017682,100022386	99970162,99993741,99999415,100007156,100011533,100015420,100017815,100035637	Gene ID= ENSG00000117620.14 TPM= 4.25 Transcript Type= protein_coding
chr1	99970057	100023824	99970057	100023824	+	ENST00000370155.9@SLC35A3	ENST00000370155.9	protein_coding	99970057,99993537,99999261,100007034,100011365,100015302,100017682,100022386	99970162,99993745,99999415,100007156,100011533,100015420,100017815,100023824	Gene ID= ENSG00000117620.14 TPM= 1.06 Transcript Type= nonsense_mediated_decay
chr1	100038098	100083237	100038098	100083237	+	transcript5587.chr1.nnic@AC118553.2	transcript5587.chr1.nnic	protein_coding	100038098,100058666,100059878,100061835,100067977,100068473,100069614,100077165,100078451,100080496,100082003	100038316,100058728,100060005,100061949,100068195,100068586,100069685,100077277,100078548,100080659,100083237	Gene ID= ENSG00000283761.1 TPM= 2.12 Transcript Type= NA
chr1	100038097	100083377	100038097	100083377	+	ENST00000370152.7@MFSD14A	ENST00000370152.7	protein_coding	100038097,100049909,100058666,100059878,100061835,100067977,100068473,100069614,100077165,100078451,100080496,100082003	100038316,100050004,100058728,100060005,100061949,100068195,100068586,100069685,100077277,100078548,100080659,100083377	Gene ID= ENSG00000156875.13 TPM= 54.17 Transcript Type= protein_coding
chr1	100133144	100150497	100133144	100150497	+	transcript5592.chr1.nic@TRMT13	transcript5592.chr1.nic	protein_coding	100133144,100136882,100137019,100139649,100140182,100140450,100140852,100143137,100144069,100147894,100148625	100133315,100136928,100137085,100139711,100140251,100140514,100141019,100143209,100144143,100148326,100150497	Gene ID= ENSG00000122435.9 TPM= 3.19 Transcript Type= NA
chr1	100148853	100178215	100148853	100178215	-	ENST00000370137.5@LRRC39	ENST00000370137.5	protein_coding	100178135,100173331,100168404,100160466,100159259,100158231,100156172,100155051,100152385,100148853	100178215,100173370,100168594,100160571,100159415,100158367,100156317,100155203,100152524,100149097	Gene ID= ENSG00000122477.12 TPM= 40.36 Transcript Type= protein_coding
chr1	100148853	100178215	100148853	100178215	-	ENST00000370138.1@LRRC39	ENST00000370138.1	protein_coding	100178135,100173331,100168404,100160466,100159259,100158231,100156172,100155051,100152385,100149366,100148853	100178215,100173370,100168594,100160571,100159415,100158367,100156317,100155203,100152524,100149435,100149097	Gene ID= ENSG00000122477.12 TPM= 2.12 Transcript Type= protein_coding
chr1	100187702	100190513	100187702	100190513	-	transcript5627.chr1.nnic@NA	transcript5627.chr1.nnic	NA	100187702	100190513	Gene ID= novel_gene_chr1_5628 TPM= 6.37 Transcript Type= NA
chr1	100265790	100266134	100265790	100266134	-	transcript5636.chr1.nic@RTCA-AS1	transcript5636.chr1.nic	antisense_RNA	100266004,100265790	100266134,100265917	Gene ID= ENSG00000224616.1 TPM= 3.19 Transcript Type= NA
chr1	100266207	100292769	100266207	100292769	+	ENST00000370128.8@RTCA	ENST00000370128.8	protein_coding	100266207,100266524,100268152,100270557,100273394,100274824,100275599,100277258,100285228,100287099,100291403	100266420,100266624,100268295,100270680,100273452,100274965,100275723,100277316,100285322,100287203,100292769	Gene ID= ENSG00000137996.12 TPM= 24.43 Transcript Type= protein_coding
chr1	100266249	100291771	100266249	100291771	+	ENST00000260563.4@RTCA	ENST00000260563.4	protein_coding	100266249,100266524,100267500,100268152,100270557,100273394,100274824,100275599,100277258,100285228,100287099,100291403	100266420,100266624,100267538,100268295,100270680,100273452,100274965,100275723,100277316,100285322,100287203,100291771	Gene ID= ENSG00000137996.12 TPM= 3.19 Transcript Type= protein_coding
chr1	100719760	100739045	100719760	100739045	+	ENST00000294728.6@VCAM1	ENST00000294728.6	protein_coding	100719760,100720476,100723020,100724624,100729107,100731198,100732418,100734502,100738123	100719924,100720751,100723340,100724890,100729382,100731518,100732684,100734768,100739045	Gene ID= ENSG00000162692.10 TPM= 8.5 Transcript Type= protein_coding
chr1	100872387	100895998	100872387	100895998	-	ENST00000370114.7@EXTL2	ENST00000370114.7	protein_coding	100894633,100888753,100877476,100876794,100872387	100895998,100888828,100877903,100876864,100874430	Gene ID= ENSG00000162694.13 TPM= 6.37 Transcript Type= protein_coding
chr1	100896076	100981753	100896076	100981753	+	ENST00000370112.8@SLC30A7	ENST00000370112.8	protein_coding	100896076,100896570,100906852,100911063,100912112,100913663,100918077,100921706,100961828,100965769,100974810,100975219	100896342,100896671,100906965,100911150,100912238,100913806,100918127,100921841,100961918,100965918,100974902,100981753	Gene ID= ENSG00000162695.11 TPM= 31.86 Transcript Type= protein_coding
chr1	100990063	101025816	100990063	101025816	-	transcript5665.chr1.nic@DPH5	transcript5665.chr1.nic	protein_coding	101025683,101025309,101021641,101013710,101001467,100995110,100990063	101025816,101025466,101021765,101013818,101001587,100995149,100990631	Gene ID= ENSG00000117543.20 TPM= 6.9 Transcript Type= NA
chr1	100990063	101025792	100990063	101025792	-	transcript5670.chr1.nic@DPH5	transcript5670.chr1.nic	protein_coding	101025683,101025309,101021641,101001467,100995110,100990063	101025792,101025466,101021765,101001587,100995149,100990631	Gene ID= ENSG00000117543.20 TPM= 2.66 Transcript Type= NA
chr1	101013649	101025753	101013649	101025753	-	ENST00000476507.1@DPH5	ENST00000476507.1	protein_coding	101025683,101025309,101021641,101013649	101025753,101025466,101021765,101013818	Gene ID= ENSG00000117543.20 TPM= 1.06 Transcript Type= processed_transcript
chr1	101234872	101236613	101234872	101236613	-	transcript5682.chr1.nnic@NA	transcript5682.chr1.nnic	NA	101234872	101236613	Gene ID= novel_gene_chr1_5683 TPM= 3.19 Transcript Type= NA
chr1	101237027	101242301	101237027	101242301	+	transcript5685.chr1.nnic@S1PR1	transcript5685.chr1.nnic	protein_coding	101237027,101241689,101242028	101237099,101241772,101242301	Gene ID= ENSG00000170989.8 TPM= 2.12 Transcript Type= NA
chr1	101236888	101241518	101236888	101241518	+	ENST00000305352.6@S1PR1	ENST00000305352.6	protein_coding	101236888,101238822	101237099,101241518	Gene ID= ENSG00000170989.8 TPM= 135.96 Transcript Type= protein_coding
chr1	103525699	103555239	103525699	103555239	+	transcript5700.chr1.nic@RNPC3	transcript5700.chr1.nic	protein_coding	103525699,103526067,103527695,103533739,103534774,103535330,103536126,103537342,103541350,103543296,103544941,103546248,103546977,103550941,103551721,103553274	103525823,103526262,103527742,103533857,103534857,103535441,103536194,103537484,103541475,103543447,103545102,103546342,103547035,103551073,103551792,103555239	Gene ID= ENSG00000185946.15 TPM= 4.25 Transcript Type= NA
chr1	103525697	103535441	103525697	103535441	+	ENST00000531883.5@RNPC3	ENST00000531883.5	protein_coding	103525697,103526067,103527695,103533739,103534774,103535330	103525823,103526262,103527742,103533857,103534857,103535441	Gene ID= ENSG00000185946.15 TPM= 2.12 Transcript Type= protein_coding
chr1	103525691	103553343	103525691	103553343	+	ENST00000524631.5@RNPC3	ENST00000524631.5	protein_coding	103525691,103527695,103533739,103534774,103535330,103536126,103537342,103541350,103543299,103544941,103546248,103546977,103550941,103551721,103553274	103526262,103527742,103533857,103534857,103535441,103536194,103537484,103541475,103543447,103545102,103546342,103547035,103551073,103551792,103553343	Gene ID= ENSG00000185946.15 TPM= 1.06 Transcript Type= protein_coding
chr1	103525971	103555239	103525971	103555239	+	ENST00000423855.6@RNPC3	ENST00000423855.6	protein_coding	103525971,103527695,103533739,103534774,103535330,103536126,103537342,103541350,103543296,103544941,103546248,103546977,103550941,103551721,103555034	103526262,103527742,103533857,103534857,103535441,103536194,103537484,103541475,103543447,103545102,103546342,103547035,103551073,103551792,103555239	Gene ID= ENSG00000185946.15 TPM= 2.12 Transcript Type= protein_coding
chr1	103525723	103526996	103525723	103526996	+	transcript5710.chr1.nnic@NA	transcript5710.chr1.nnic	NA	103525723	103526996	Gene ID= novel_gene_chr1_5711 TPM= 2.12 Transcript Type= NA
chr1	107056679	107059294	107056679	107059294	+	ENST00000370078.1@PRMT6	ENST00000370078.1	protein_coding	107056679	107059294	Gene ID= ENSG00000198890.7 TPM= 10.62 Transcript Type= protein_coding
chr1	108560089	108639327	108560089	108639327	+	ENST00000370035.7@FAM102B	ENST00000370035.7	protein_coding	108560089,108600566,108606223,108612178,108616382,108624645,108628167,108628395,108628677,108629588,108635108	108560565,108600686,108606252,108612294,108616428,108624748,108628262,108628584,108628804,108629657,108639327	Gene ID= ENSG00000162636.15 TPM= 5.31 Transcript Type= protein_coding
chr1	108648290	108661122	108648290	108661122	-	ENST00000402983.5@HENMT1	ENST00000402983.5	protein_coding	108660963,108659864,108657451,108655586,108654716,108651030,108650211,108648290	108661122,108659962,108657579,108655698,108654850,108651209,108650388,108648991	Gene ID= ENSG00000162639.15 TPM= 1.06 Transcript Type= protein_coding
chr1	108648295	108661526	108648295	108661526	-	ENST00000370032.9@HENMT1	ENST00000370032.9	protein_coding	108661184,108659864,108657451,108655586,108654716,108651030,108650211,108648295	108661526,108659962,108657579,108655698,108654850,108651209,108650388,108648991	Gene ID= ENSG00000162639.15 TPM= 1.06 Transcript Type= protein_coding
chr1	108692298	108697504	108692298	108697504	+	transcript5745.chr1.nic@PRPF38B	transcript5745.chr1.nic	protein_coding	108692298,108695702,108696043,108696277	108692867,108695770,108696194,108697504	Gene ID= ENSG00000134186.11 TPM= 3.19 Transcript Type= NA
chr1	108692323	108701803	108692323	108701803	+	ENST00000370025.8@PRPF38B	ENST00000370025.8	protein_coding	108692323,108695702,108696043,108696277,108698604,108699162	108692867,108695770,108696194,108696337,108698827,108701803	Gene ID= ENSG00000134186.11 TPM= 3.19 Transcript Type= protein_coding
chr1	108745305	108747414	108745305	108747414	-	transcript5753.chr1.nnic@NA	transcript5753.chr1.nnic	NA	108745305	108747414	Gene ID= novel_gene_chr1_5754 TPM= 2.12 Transcript Type= NA
chr1	108746609	108809526	108746609	108809526	+	transcript5750.chr1.nnic@STXBP3	transcript5750.chr1.nnic	protein_coding	108746609,108752257,108753063,108756690,108758510,108759985,108772665,108776333,108782422,108782649,108793582,108794827,108796234,108796620,108798145,108800220,108807401,108808783	108746786,108752306,108753144,108756766,108758588,108760085,108772819,108776423,108782517,108782706,108793647,108794907,108796372,108796726,108798237,108800305,108807549,108809526	Gene ID= ENSG00000116266.10 TPM= 2.12 Transcript Type= NA
chr1	108746688	108809526	108746688	108809526	+	ENST00000370008.3@STXBP3	ENST00000370008.3	protein_coding	108746688,108752257,108753063,108756690,108758510,108759985,108772665,108776333,108779286,108782422,108782649,108793582,108794827,108796234,108796620,108798145,108800220,108807401,108808783	108746786,108752306,108753144,108756766,108758588,108760085,108772819,108776423,108779410,108782517,108782706,108793647,108794907,108796372,108796726,108798237,108800305,108807549,108809526	Gene ID= ENSG00000116266.10 TPM= 54.17 Transcript Type= protein_coding
chr1	108875350	108934545	108875350	108934545	+	ENST00000406462.6@GPSM2	ENST00000406462.6	protein_coding	108875350,108876737,108885275,108896864,108897492,108897959,108898642,108898879,108901790,108903126,108904125,108914338,108918613,108922417,108924000,108929701	108875382,108877228,108885578,108897085,108897627,108898101,108898765,108898994,108901945,108903234,108904254,108914408,108918789,108922576,108924214,108934545	Gene ID= ENSG00000121957.12 TPM= 1.06 Transcript Type= protein_coding
chr1	108931793	108963434	108931793	108963434	-	transcript5758.chr1.nnic@CLCC1	transcript5758.chr1.nnic	protein_coding	108963361,108962309,108950309,108949820,108947611,108943836,108943475,108941405,108940045,108939636,108938166,108937077,108934625,108931793	108963434,108962469,108950448,108949921,108947718,108944057,108943615,108941498,108940142,108939782,108938216,108937418,108934942,108932501	Gene ID= ENSG00000121940.15 TPM= 2.47 Transcript Type= NA
chr1	108931793	108963472	108931793	108963472	-	transcript5766.chr1.nnic@CLCC1	transcript5766.chr1.nnic	protein_coding	108963361,108954370,108950309,108949820,108947611,108943836,108943475,108941405,108940045,108939636,108937077,108934625,108931793	108963472,108954472,108950448,108949921,108947718,108944057,108943615,108941498,108940142,108939782,108937418,108934942,108932501	Gene ID= ENSG00000121940.15 TPM= 2.47 Transcript Type= NA
chr1	108931793	108963453	108931793	108963453	-	transcript5767.chr1.nic@CLCC1	transcript5767.chr1.nic	protein_coding	108963361,108962309,108950309,108949820,108947611,108943836,108943475,108941405,108940045,108939636,108937077,108934625,108931793	108963453,108962469,108950448,108949921,108947718,108944057,108943615,108941498,108940142,108939782,108937418,108934942,108932501	Gene ID= ENSG00000121940.15 TPM= 3.54 Transcript Type= NA
chr1	108960062	108962884	108960062	108962884	+	transcript5780.chr1.nnic@NA	transcript5780.chr1.nnic	NA	108960062	108962884	Gene ID= novel_gene_chr1_5781 TPM= 3.19 Transcript Type= NA
chr1	108970214	109042113	108970214	109042113	-	ENST00000369965.8@WDR47	ENST00000369965.8	protein_coding	109041862,109023355,109017518,109013841,109010916,109004592,109002224,108995580,108991254,108986523,108983282,108982609,108981733,108974536,108970214	109042113,109023521,109017601,109013925,109011718,109004718,109002402,108995837,108991329,108986680,108983451,108982779,108981864,108974754,108971572	Gene ID= ENSG00000085433.15 TPM= 12.75 Transcript Type= protein_coding
chr1	108992282	108992836	108992282	108992836	+	ENST00000414070.1@BX679664.3	ENST00000414070.1	processed_pseudogene	108992282	108992836	Gene ID= ENSG00000244716.3 TPM= 1.06 Transcript Type= processed_pseudogene
chr1	109064140	109076002	109064140	109076002	-	ENST00000338366.5@TAF13	ENST00000338366.5	protein_coding	109075921,109074987,109066135,109064140	109076002,109075065,109066232,109064693	Gene ID= ENSG00000197780.9 TPM= 1.06 Transcript Type= protein_coding
chr1	109089803	109096934	109089803	109096934	+	ENST00000338272.8@TMEM167B	ENST00000338272.8	protein_coding	109089803,109092890,109094417	109090882,109093021,109096934	Gene ID= ENSG00000215717.5 TPM= 16.46 Transcript Type= protein_coding
chr1	109090744	109096931	109090744	109096931	+	transcript5792.chr1.nnic@TMEM167B	transcript5792.chr1.nnic	protein_coding	109090744,109094417	109090882,109096931	Gene ID= ENSG00000215717.5 TPM= 4.78 Transcript Type= NA
chr1	109213918	109238120	109213918	109238120	+	ENST00000234677.6@SARS	ENST00000234677.6	protein_coding	109213918,109223978,109228352,109229414,109230878,109231631,109235210,109235977,109236391,109237244,109237731	109214128,109224048,109228432,109229572,109231021,109231786,109235431,109236106,109236548,109237373,109238120	Gene ID= ENSG00000031698.12 TPM= 156.67 Transcript Type= protein_coding
chr1	109213982	109238148	109213982	109238148	+	ENST00000369923.4@SARS	ENST00000369923.4	protein_coding	109213982,109223978,109228352,109229414,109230878,109231631,109235210,109235977,109236391,109236805,109237244,109237731	109214128,109224048,109228432,109229572,109231021,109231786,109235431,109236106,109236548,109236870,109237373,109238148	Gene ID= ENSG00000031698.12 TPM= 9.03 Transcript Type= protein_coding
chr1	109292365	109296353	109292365	109296353	-	ENST00000489706.5@MYBPHL	ENST00000489706.5	protein_coding	109296234,109295111,109294206,109292365	109296353,109295297,109294249,109292464	Gene ID= ENSG00000221986.6 TPM= 1.06 Transcript Type= processed_transcript
chr1	109309568	109393357	109309568	109393357	-	ENST00000538502.5@SORT1	ENST00000538502.5	protein_coding	109393027,109369530,109367408,109355367,109354367,109350929,109347483,109345751,109342014,109340724,109336240,109327499,109326992,109324899,109322932,109317853,109316850,109314672,109314261,109309568	109393357,109369589,109367481,109355469,109354531,109351002,109347532,109345878,109342158,109340879,109336346,109327601,109327160,109325089,109323121,109317969,109316958,109314778,109314384,109314057	Gene ID= ENSG00000134243.11 TPM= 42.31 Transcript Type= protein_coding
chr1	109309570	109397918	109309570	109397918	-	transcript5813.chr1.nic@SORT1	transcript5813.chr1.nic	protein_coding	109397587,109369530,109367408,109355367,109354367,109350929,109347483,109345751,109342014,109340724,109336240,109327499,109326992,109324899,109322932,109317853,109316850,109314672,109314261,109309570	109397918,109369589,109367481,109355469,109354531,109351002,109347532,109345878,109342158,109340879,109336346,109327601,109327160,109325089,109323121,109317969,109316958,109314778,109314384,109314057	Gene ID= ENSG00000134243.11 TPM= 55.05 Transcript Type= NA
chr1	109309570	109397951	109309570	109397951	-	ENST00000256637.7@SORT1	ENST00000256637.7	protein_coding	109397587,109369530,109367408,109355367,109354367,109350929,109347483,109345751,109342014,109340724,109336240,109327499,109326992,109324899,109322932,109317853,109316850,109314672,109314261,109309570	109397951,109369589,109367481,109355469,109354531,109351002,109347532,109345881,109342158,109340879,109336346,109327601,109327160,109325089,109323121,109317969,109316958,109314778,109314384,109314057	Gene ID= ENSG00000134243.11 TPM= 109.22 Transcript Type= protein_coding
chr1	109401850	109426485	109401850	109426485	-	transcript5845.chr1.nnic@PSMA5	transcript5845.chr1.nnic	protein_coding	109426420,109421860,109415237,109413068,109412077,109411877,109411011,109409928,109401850	109426485,109421926,109415363,109413135,109412184,109411935,109411113,109410014,109402090	Gene ID= ENSG00000143106.12 TPM= 3.72 Transcript Type= NA
chr1	109401850	109426443	109401850	109426443	-	transcript5846.chr1.nnic@PSMA5	transcript5846.chr1.nnic	protein_coding	109426302,109415237,109413068,109412077,109411877,109411011,109409928,109401850	109426443,109415363,109413135,109412184,109411935,109411113,109410014,109402090	Gene ID= ENSG00000143106.12 TPM= 2.66 Transcript Type= NA
chr1	109466635	109480432	109466635	109480432	+	transcript5851.chr1.nnic@SYPL2	transcript5851.chr1.nnic	protein_coding	109466635,109467059,109475581,109476770,109477818,109479378	109466897,109467133,109475699,109476977,109478009,109480432	Gene ID= ENSG00000143028.8 TPM= 2.12 Transcript Type= NA
chr1	109466540	109477282	109466540	109477282	+	transcript5854.chr1.nic@SYPL2	transcript5854.chr1.nic	protein_coding	109466540,109467059,109475581,109476776	109466897,109467133,109475705,109477282	Gene ID= ENSG00000143028.8 TPM= 2.12 Transcript Type= NA
chr1	109466628	109482137	109466628	109482137	+	ENST00000369872.3@SYPL2	ENST00000369872.3	protein_coding	109466628,109467059,109475581,109476776,109477818,109479378	109466897,109467133,109475705,109476977,109478009,109482137	Gene ID= ENSG00000143028.8 TPM= 27.62 Transcript Type= protein_coding
chr1	109469372	109471995	109469372	109471995	-	transcript5862.chr1.nnic@NA	transcript5862.chr1.nnic	NA	109469372	109471995	Gene ID= novel_gene_chr1_5863 TPM= 3.19 Transcript Type= NA
chr1	109494099	109500433	109494099	109500433	+	ENST00000310611.8@CYB561D1	ENST00000310611.8	protein_coding	109494099,109494520,109495143,109495756	109494287,109494623,109495180,109500433	Gene ID= ENSG00000174151.14 TPM= 3.19 Transcript Type= protein_coding
chr1	109504175	109509682	109504175	109509682	-	ENST00000369864.4@AMIGO1	ENST00000369864.4	protein_coding	109509420,109504175	109509682,109508999	Gene ID= ENSG00000181754.6 TPM= 18.06 Transcript Type= protein_coding
chr1	109507068	109509738	109507068	109509738	-	ENST00000369862.1@AMIGO1	ENST00000369862.1	protein_coding	109509420,109507068	109509738,109508977	Gene ID= ENSG00000181754.6 TPM= 2.12 Transcript Type= protein_coding
chr1	109597897	109598108	109597897	109598108	+	transcript5878.chr1.nnic@NA	transcript5878.chr1.nnic	NA	109597897	109598108	Gene ID= novel_gene_chr1_5879 TPM= 2.12 Transcript Type= NA
chr1	109620654	109632051	109620654	109632051	+	ENST00000256578.7@AMPD2	ENST00000256578.7	protein_coding	109620654,109625303,109625662,109626160,109626319,109626726,109627175,109627429,109627774,109628083,109628364,109628643,109629109,109629327,109629796,109630233,109630683,109630943	109621266,109625433,109625792,109626228,109626427,109626912,109627316,109627518,109627903,109628277,109628495,109628806,109629235,109629490,109629916,109630406,109630793,109632051	Gene ID= ENSG00000116337.15 TPM= 3.19 Transcript Type= protein_coding
chr1	109630149	109632049	109630149	109632049	+	transcript5883.chr1.nic@AMPD2	transcript5883.chr1.nic	protein_coding	109630149,109630683,109630943	109630406,109630793,109632049	Gene ID= ENSG00000116337.15 TPM= 8.5 Transcript Type= NA
chr1	109619837	109632051	109619837	109632051	+	ENST00000342115.8@AMPD2	ENST00000342115.8	protein_coding	109619837,109625303,109625662,109626160,109626319,109626726,109627175,109627429,109627774,109628083,109628364,109628643,109629109,109629327,109629796,109630233,109630683,109630943	109620278,109625433,109625792,109626228,109626427,109626912,109627316,109627518,109627903,109628277,109628495,109628806,109629235,109629490,109629916,109630406,109630793,109632051	Gene ID= ENSG00000116337.15 TPM= 5.31 Transcript Type= protein_coding
chr1	109656071	109661700	109656071	109661700	+	transcript5884.chr1.nic@GSTM4	transcript5884.chr1.nic	protein_coding	109656071,109656712,109657215,109657590,109657772,109658814,109659000,109659790,109661165	109656425,109656787,109657279,109657671,109657872,109658909,109659110,109659959,109661700	Gene ID= ENSG00000168765.16 TPM= 3.19 Transcript Type= NA
chr1	109656306	109662003	109656306	109662003	+	transcript5885.chr1.nnic@GSTM4	transcript5885.chr1.nnic	protein_coding	109656306,109656712,109657215,109657590,109657772,109658814,109659000,109661165,109661994	109656425,109656787,109657279,109657671,109657872,109658909,109659110,109661699,109662003	Gene ID= ENSG00000168765.16 TPM= 2.12 Transcript Type= NA
chr1	109656081	109661700	109656081	109661700	+	ENST00000369836.8@GSTM4	ENST00000369836.8	protein_coding	109656081,109656712,109657215,109657590,109657772,109658814,109659000,109661165	109656425,109656787,109657279,109657671,109657872,109658909,109659110,109661700	Gene ID= ENSG00000168765.16 TPM= 33.99 Transcript Type= protein_coding
chr1	109656122	109665496	109656122	109665496	+	ENST00000326729.9@GSTM4	ENST00000326729.9	protein_coding	109656122,109656712,109657215,109657590,109657772,109658814,109659000,109665011	109656425,109656787,109657279,109657671,109657872,109658909,109659110,109665496	Gene ID= ENSG00000168765.16 TPM= 8.5 Transcript Type= protein_coding
chr1	109668001	109675286	109668001	109675286	+	transcript5889.chr1.nic@GSTM2	transcript5889.chr1.nic	protein_coding	109668001,109668425,109668925,109669290,109669471,109670175,109671287,109671473,109674747	109668151,109668500,109668989,109669371,109670063,109670234,109671382,109671583,109675286	Gene ID= ENSG00000213366.12 TPM= 3.19 Transcript Type= NA
chr1	109668066	109675286	109668066	109675286	+	ENST00000241337.8@GSTM2	ENST00000241337.8	protein_coding	109668066,109668425,109668925,109669290,109669471,109671287,109671473,109674747	109668151,109668500,109668989,109669371,109669571,109671382,109671583,109675286	Gene ID= ENSG00000213366.12 TPM= 33.46 Transcript Type= protein_coding
chr1	109687820	109693745	109687820	109693745	+	ENST00000309851.9@GSTM1	ENST00000309851.9	protein_coding	109687820,109688170,109688673,109689048,109689225,109690271,109690454,109693206	109687909,109688245,109688737,109689129,109689325,109690366,109690564,109693745	Gene ID= ENSG00000134184.12 TPM= 46.2 Transcript Type= protein_coding
chr1	109687840	109693743	109687840	109693743	+	ENST00000349334.7@GSTM1	ENST00000349334.7	protein_coding	109687840,109688170,109688673,109689048,109689225,109690271,109693206	109687909,109688245,109688737,109689129,109689325,109690366,109693743	Gene ID= ENSG00000134184.12 TPM= 2.66 Transcript Type= protein_coding
chr1	109691227	109695243	109691227	109695243	-	transcript5905.chr1.nnic@NA	transcript5905.chr1.nnic	NA	109691227	109695243	Gene ID= novel_gene_chr1_5906 TPM= 8.5 Transcript Type= NA
chr1	109736494	109741038	109736494	109741038	-	ENST00000361066.6@GSTM3	ENST00000361066.6	protein_coding	109740953,109740240,109739833,109739429,109738285,109738091,109737656,109737457,109736494	109741038,109740511,109739908,109739493,109738366,109738191,109737751,109737567,109737169	Gene ID= ENSG00000134202.10 TPM= 8.5 Transcript Type= protein_coding
chr1	109736930	109740327	109736930	109740327	-	ENST00000486823.5@GSTM3	ENST00000486823.5	protein_coding	109740240,109739429,109738285,109738091,109737656,109737457,109736930	109740327,109739493,109738366,109738191,109737751,109737567,109737169	Gene ID= ENSG00000134202.10 TPM= 2.12 Transcript Type= processed_transcript
chr1	109910899	109926743	109910899	109926743	+	ENST00000369802.7@CSF1	ENST00000369802.7	protein_coding	109910899,109914259,109915634,109917293,109921847,109923166,109924776,109925147,109926063	109911062,109914381,109915696,109917463,109921994,109924190,109924828,109925202,109926743	Gene ID= ENSG00000184371.13 TPM= 4.25 Transcript Type= protein_coding
chr1	109984686	110023735	109984686	110023735	+	ENST00000369799.9@AHCYL1	ENST00000369799.9	protein_coding	109984686,110009034,110011214,110012362,110012897,110014763,110015425,110016344,110016667,110017495,110017946,110018373,110018552,110019051,110019548,110020731,110021674	109985172,110009145,110011357,110012462,110012999,110014857,110015531,110016460,110016730,110017583,110018016,110018467,110018650,110019119,110019626,110020851,110023735	Gene ID= ENSG00000168710.17 TPM= 156.14 Transcript Type= protein_coding
chr1	110004131	110022389	110004131	110022389	+	ENST00000359172.3@AHCYL1	ENST00000359172.3	protein_coding	110004131,110009034,110011214,110012362,110012897,110014763,110015425,110016344,110016667,110017495,110017946,110018373,110018552,110019051,110019548,110020731,110021674	110004451,110009145,110011357,110012462,110012999,110014857,110015531,110016460,110016730,110017583,110018016,110018467,110018650,110019119,110019626,110020851,110022389	Gene ID= ENSG00000168710.17 TPM= 1.06 Transcript Type= protein_coding
chr1	109984734	110022400	109984734	110022400	+	transcript5925.chr1.nnic@AHCYL1	transcript5925.chr1.nnic	protein_coding	109984734,110009034,110011214,110012362,110012897,110014763,110015425,110016344,110016667,110017495,110017946,110018373,110018552,110019051,110019548,110021674	109985172,110009145,110011357,110012462,110012999,110014857,110015531,110016460,110016730,110017583,110018016,110018467,110018650,110019119,110019626,110022400	Gene ID= ENSG00000168710.17 TPM= 4.25 Transcript Type= NA
chr1	109984734	110022389	109984734	110022389	+	transcript5927.chr1.nnic@AHCYL1	transcript5927.chr1.nnic	protein_coding	109984734,110009034,110011214,110012362,110012897,110014763,110016344,110016667,110017495,110017946,110018373,110018552,110019051,110019548,110020731,110021674	109985172,110009145,110011357,110012462,110012999,110014857,110016460,110016730,110017583,110018016,110018467,110018650,110019119,110019626,110020851,110022389	Gene ID= ENSG00000168710.17 TPM= 4.25 Transcript Type= NA
chr1	110034616	110054641	110034616	110054641	+	ENST00000369795.7@STRIP1	ENST00000369795.7	protein_coding	110034616,110037891,110038683,110039172,110039395,110040635,110041536,110041734,110043088,110043639,110044840,110045015,110046680,110047542,110047772,110049112,110049460,110050343,110050956,110051683,110053665	110034817,110037960,110038757,110039306,110039515,110040703,110041642,110041861,110043270,110043856,110044905,110045078,110046751,110047616,110047869,110049238,110049560,110050409,110051060,110051887,110054641	Gene ID= ENSG00000143093.14 TPM= 53.11 Transcript Type= protein_coding
chr1	110210139	110227110	110210139	110227110	+	transcript5946.chr1.nic@KCNC4	transcript5946.chr1.nic	protein_coding	110210139,110222964,110225975	110212177,110223900,110227110	Gene ID= ENSG00000116396.14 TPM= 7.44 Transcript Type= NA
chr1	110211500	110234044	110211500	110234044	+	ENST00000438661.2@KCNC4	ENST00000438661.2	protein_coding	110211500,110222964,110225975,110232911	110212177,110223900,110226178,110234044	Gene ID= ENSG00000116396.14 TPM= 5.31 Transcript Type= protein_coding
chr1	110245161	110248249	110245161	110248249	+	transcript5950.chr1.nnic@NA	transcript5950.chr1.nnic	NA	110245161	110248249	Gene ID= novel_gene_chr1_5951 TPM= 3.19 Transcript Type= NA
chr1	110337402	110338792	110337402	110338792	-	transcript5952.chr1.nnic@NA	transcript5952.chr1.nnic	NA	110337402	110338792	Gene ID= novel_gene_chr1_5953 TPM= 2.12 Transcript Type= NA
chr1	110339323	110346677	110339323	110346677	+	ENST00000487146.6@RBM15	ENST00000487146.6	protein_coding	110339323,110346308	110342268,110346677	Gene ID= ENSG00000162775.14 TPM= 5.31 Transcript Type= protein_coding
chr1	110339433	110346675	110339433	110346675	+	transcript5959.chr1.nnic@NA	transcript5959.chr1.nnic	NA	110339433	110346675	Gene ID= novel_gene_chr1_5960 TPM= 12.75 Transcript Type= NA
chr1	110401249	110407668	110401249	110407668	-	ENST00000483260.5@LAMTOR5	ENST00000483260.5	protein_coding	110407586,110407033,110406318,110403919,110401249	110407668,110407128,110406379,110404036,110401583	Gene ID= ENSG00000134248.13 TPM= 4.43 Transcript Type= protein_coding
chr1	110401253	110407942	110401253	110407942	-	ENST00000256644.8@LAMTOR5	ENST00000256644.8	protein_coding	110407586,110406318,110403919,110401253	110407942,110406379,110404036,110401583	Gene ID= ENSG00000134248.13 TPM= 148.88 Transcript Type= protein_coding
chr1	110401249	110407671	110401249	110407671	-	ENST00000474861.6@LAMTOR5	ENST00000474861.6	protein_coding	110407033,110406318,110403919,110401249	110407671,110406379,110404036,110401583	Gene ID= ENSG00000134248.13 TPM= 2.84 Transcript Type= protein_coding
chr1	110407525	110416274	110407525	110416274	+	ENST00000457535.5@LAMTOR5-AS1	ENST00000457535.5	processed_transcript	110407525,110412173,110416009	110407954,110412293,110416274	Gene ID= ENSG00000224699.8 TPM= 1.06 Transcript Type= antisense_RNA
chr1	110873154	110899928	110873154	110899928	+	ENST00000271324.5@CD53	ENST00000271324.5	protein_coding	110873154,110891392,110892345,110894327,110894960,110896653,110897809,110899124	110873248,110891471,110892533,110894401,110895055,110896733,110897892,110899928	Gene ID= ENSG00000143119.12 TPM= 5.31 Transcript Type= protein_coding
chr1	110947185	110964079	110947185	110964079	-	ENST00000369763.4@LRIF1	ENST00000369763.4	protein_coding	110963621,110951288,110949851,110947185	110964079,110952815,110950123,110948399	Gene ID= ENSG00000121931.15 TPM= 3.19 Transcript Type= protein_coding
chr1	110947222	110963965	110947222	110963965	-	ENST00000485275.2@LRIF1	ENST00000485275.2	protein_coding	110963621,110949851,110947222	110963965,110950123,110948399	Gene ID= ENSG00000121931.15 TPM= 15.93 Transcript Type= protein_coding
chr1	111117333	111140210	111117333	111140210	-	transcript5978.chr1.nic@DRAM2	transcript5978.chr1.nic	protein_coding	111140038,111139501,111137523,111131424,111126227,111124742,111120516,111119877,111118805,111117333	111140210,111139666,111137586,111131568,111126294,111124881,111120693,111119959,111118897,111118267	Gene ID= ENSG00000156171.14 TPM= 3.72 Transcript Type= NA
chr1	111117333	111140199	111117333	111140199	-	transcript5979.chr1.nic@DRAM2	transcript5979.chr1.nic	protein_coding	111140038,111139501,111137523,111131424,111126227,111124742,111120516,111119877,111118805,111117333	111140199,111139711,111137586,111131568,111126294,111124881,111120693,111119959,111118897,111118267	Gene ID= ENSG00000156171.14 TPM= 3.72 Transcript Type= NA
chr1	111140223	111185102	111140223	111185102	+	transcript5986.chr1.nnic@CEPT1	transcript5986.chr1.nnic	protein_coding	111140223,111147642,111159380,111161155,111173114,111174879,111182187,111182799,111183462,111184191	111140307,111148053,111159527,111161296,111173258,111174963,111182318,111182957,111183587,111185102	Gene ID= ENSG00000134255.13 TPM= 2.47 Transcript Type= NA
chr1	111140223	111185102	111140223	111185102	+	transcript5987.chr1.nnic@CEPT1	transcript5987.chr1.nnic	protein_coding	111140223,111147642,111159380,111161155,111167106,111182187,111182799,111183462,111184191	111140307,111148053,111159527,111161296,111167190,111182318,111182957,111183587,111185102	Gene ID= ENSG00000134255.13 TPM= 3.54 Transcript Type= NA
chr1	111140226	111185102	111140226	111185102	+	ENST00000357172.8@CEPT1	ENST00000357172.8	protein_coding	111140226,111147642,111159380,111161155,111174879,111182187,111182799,111183462,111184191	111140307,111148053,111159527,111161296,111174963,111182318,111182957,111183587,111185102	Gene ID= ENSG00000134255.13 TPM= 3.54 Transcript Type= protein_coding
chr1	111439890	111449376	111439890	111449376	-	ENST00000235090.9@WDR77	ENST00000235090.9	protein_coding	111449055,111448619,111447435,111447095,111444054,111443867,111443323,111442653,111442025,111439890	111449376,111448804,111447576,111447144,111444124,111443921,111443394,111442761,111442093,111441389	Gene ID= ENSG00000116455.13 TPM= 69.04 Transcript Type= protein_coding
chr1	111448936	111462773	111448936	111462773	+	ENST00000369722.7@ATP5F1	ENST00000369722.7	protein_coding	111448936,111449837,111454211,111456086,111456630,111459457,111460917	111449581,111449873,111454356,111456249,111456755,111459636,111462773	Gene ID= ENSG00000116459.10 TPM= 498.15 Transcript Type= protein_coding
chr1	111449465	111461332	111449465	111461332	+	ENST00000369721.8@ATP5F1	ENST00000369721.8	protein_coding	111449465,111449837,111456086,111456630,111459457,111460917	111449581,111449873,111456249,111456755,111459636,111461332	Gene ID= ENSG00000116459.10 TPM= 19.12 Transcript Type= processed_transcript
chr1	111463285	111466756	111463285	111466756	+	transcript6033.chr1.nnic@NA	transcript6033.chr1.nnic	NA	111463285	111466756	Gene ID= novel_gene_chr1_6034 TPM= 8.5 Transcript Type= NA
chr1	111473792	111478512	111473792	111478512	+	ENST00000343534.9@C1orf162	ENST00000343534.9	protein_coding	111473792,111476018,111476798,111477334,111477651,111477983	111474030,111476065,111476867,111477428,111477775,111478512	Gene ID= ENSG00000143110.11 TPM= 5.31 Transcript Type= protein_coding
chr1	111499429	111503760	111499429	111503760	-	ENST00000241356.4@ADORA3	ENST00000241356.4	protein_coding	111503005,111499429	111503760,111500556	Gene ID= ENSG00000282608.1 TPM= 1.06 Transcript Type= protein_coding
chr1	111619758	111713113	111619758	111713113	+	transcript6044.chr1.nic@RAP1A	transcript6044.chr1.nic	protein_coding	111619758,111627470,111691334,111695341,111697441,111703336,111704343,111709149,111712431	111619934,111627563,111691417,111695409,111697497,111703476,111704486,111709264,111713113	Gene ID= ENSG00000116473.14 TPM= 5.66 Transcript Type= NA
chr1	111619762	111713113	111619762	111713113	+	transcript6046.chr1.nic@RAP1A	transcript6046.chr1.nic	protein_coding	111619762,111691334,111695341,111697441,111703336,111704343,111706663,111709149,111712431	111619934,111691417,111695409,111697497,111703476,111704486,111706777,111709264,111713113	Gene ID= ENSG00000116473.14 TPM= 2.47 Transcript Type= NA
chr1	111619762	111713113	111619762	111713113	+	transcript6049.chr1.nnic@RAP1A	transcript6049.chr1.nnic	protein_coding	111619762,111691334,111695341,111697441,111703336,111704343,111709149,111712431	111619934,111691364,111695409,111697497,111703476,111704486,111709264,111713113	Gene ID= ENSG00000116473.14 TPM= 2.47 Transcript Type= NA
chr1	111619783	111716691	111619783	111716691	+	ENST00000369709.3@RAP1A	ENST00000369709.3	protein_coding	111619783,111691334,111695341,111697441,111703336,111704343,111709149,111712431	111619934,111691417,111695409,111697497,111703476,111704486,111709264,111716691	Gene ID= ENSG00000116473.14 TPM= 8.5 Transcript Type= protein_coding
chr1	111642788	111646171	111642788	111646171	-	transcript6057.chr1.nnic@NA	transcript6057.chr1.nnic	NA	111642788	111646171	Gene ID= novel_gene_chr1_6058 TPM= 3.19 Transcript Type= NA
chr1	111655660	111657012	111655660	111657012	-	transcript6059.chr1.nnic@NA	transcript6059.chr1.nnic	NA	111655660	111657012	Gene ID= novel_gene_chr1_6060 TPM= 11.68 Transcript Type= NA
chr1	111722064	111739424	111722064	111739424	-	ENST00000357260.5@FAM212B	ENST00000357260.5	protein_coding	111739186,111722064	111739424,111727804	Gene ID= ENSG00000197852.9 TPM= 4.25 Transcript Type= protein_coding
chr1	111739841	111747798	111739841	111747798	+	ENST00000430373.1@FAM212B-AS1	ENST00000430373.1	antisense_RNA	111739841,111744375,111746060	111740077,111744529,111747798	Gene ID= ENSG00000227811.2 TPM= 1.06 Transcript Type= antisense_RNA
chr1	111755305	111768016	111755305	111768016	+	ENST00000369702.4@DDX20	ENST00000369702.4	protein_coding	111755305,111756646,111759400,111760474,111760706,111760987,111761226,111762255,111762677,111762906,111765737	111756225,111756740,111759568,111760588,111760848,111761125,111761284,111762337,111762782,111763007,111768016	Gene ID= ENSG00000064703.11 TPM= 8.5 Transcript Type= protein_coding
chr1	111830747	111990121	111830747	111990121	-	transcript6078.chr1.nnic@KCND3	transcript6078.chr1.nnic	protein_coding	111989505,111981621,111830747	111990121,111982798,111831131	Gene ID= ENSG00000171385.9 TPM= 6.02 Transcript Type= NA
chr1	111839546	111990121	111839546	111990121	-	transcript6080.chr1.nnic@KCND3	transcript6080.chr1.nnic	protein_coding	111989505,111981621,111839546	111990121,111982798,111841345	Gene ID= ENSG00000171385.9 TPM= 3.9 Transcript Type= NA
chr1	111839548	111990121	111839548	111990121	-	transcript6081.chr1.nnic@KCND3	transcript6081.chr1.nnic	protein_coding	111989505,111981621,111839548	111990121,111982798,111841848	Gene ID= ENSG00000171385.9 TPM= 2.84 Transcript Type= NA
chr1	111898611	111900165	111898611	111900165	-	transcript6087.chr1.nnic@NA	transcript6087.chr1.nnic	NA	111898611	111900165	Gene ID= novel_gene_chr1_6088 TPM= 2.12 Transcript Type= NA
chr1	111949084	111951183	111949084	111951183	+	transcript6085.chr1.nnic@NA	transcript6085.chr1.nnic	NA	111949084	111951183	Gene ID= novel_gene_chr1_6086 TPM= 5.31 Transcript Type= NA
chr1	112396181	112461164	112396181	112461164	+	ENST00000271277.10@CTTNBP2NL	ENST00000271277.10	protein_coding	112396181,112412194,112416157,112448942,112454449,112455931	112396272,112412317,112416264,112449172,112454556,112461164	Gene ID= ENSG00000143079.14 TPM= 4.25 Transcript Type= protein_coding
chr1	112523518	112619418	112523518	112619418	-	ENST00000358039.8@ST7L	ENST00000358039.8	protein_coding	112618909,112616813,112610841,112600794,112597971,112591525,112583972,112582375,112581992,112578345,112576986,112555868,112550601,112541951,112523518	112619418,112616895,112611003,112600848,112598086,112591603,112584126,112582472,112582106,112578417,112577088,112556018,112550693,112542090,112526111	Gene ID= ENSG00000007341.18 TPM= 1.06 Transcript Type= protein_coding
chr1	112523518	112619189	112523518	112619189	-	ENST00000360743.8@ST7L	ENST00000360743.8	protein_coding	112618909,112616813,112610841,112600794,112597971,112591525,112583972,112582375,112581992,112578345,112576986,112555868,112541951,112523518	112619189,112616895,112611003,112600848,112598086,112591603,112584126,112582472,112582106,112578417,112577088,112556018,112542090,112526111	Gene ID= ENSG00000007341.18 TPM= 1.06 Transcript Type= protein_coding
chr1	112541790	112619189	112541790	112619189	-	ENST00000343210.11@ST7L	ENST00000343210.11	protein_coding	112618909,112616813,112610841,112600794,112597971,112591525,112583972,112582375,112581992,112578345,112576986,112555868,112550601,112541790	112619189,112616895,112611003,112600848,112598086,112591603,112584126,112582472,112582106,112578417,112577088,112556018,112550693,112542090	Gene ID= ENSG00000007341.18 TPM= 1.06 Transcript Type= protein_coding
chr1	112610459	112619774	112610459	112619774	-	ENST00000467335.5@ST7L	ENST00000467335.5	protein_coding	112619644,112618909,112616813,112610459	112619774,112619139,112616895,112611003	Gene ID= ENSG00000007341.18 TPM= 3.19 Transcript Type= processed_transcript
chr1	112619173	112671619	112619173	112671619	+	ENST00000263168.3@CAPZA1	ENST00000263168.3	protein_coding	112619173,112647210,112649418,112653598,112654465,112659022,112659701,112667074,112669543,112669992	112619883,112647273,112649469,112653661,112654671,112659101,112659779,112667145,112669605,112671619	Gene ID= ENSG00000116489.12 TPM= 53.11 Transcript Type= protein_coding
chr1	112660840	112662957	112660840	112662957	-	transcript6124.chr1.nnic@NA	transcript6124.chr1.nnic	NA	112660840	112662957	Gene ID= novel_gene_chr1_6125 TPM= 25.49 Transcript Type= NA
chr1	112674487	112700739	112674487	112700739	+	ENST00000369645.5@MOV10	ENST00000369645.5	protein_coding	112674487,112674848,112688935,112689415,112689840,112691665,112692761,112694018,112694453,112694749,112695416,112696148,112696437,112696630,112697994,112698287,112698715,112699685,112699894,112700219,112700416	112674729,112675049,112689138,112689650,112690098,112691799,112692929,112694172,112694629,112694896,112695574,112696251,112696534,112696846,112698111,112698478,112698789,112699810,112699982,112700340,112700739	Gene ID= ENSG00000155363.18 TPM= 7.97 Transcript Type= protein_coding
chr1	112674421	112700746	112674421	112700746	+	ENST00000413052.6@MOV10	ENST00000413052.6	protein_coding	112674421,112674832,112688935,112689415,112689840,112691665,112692761,112694018,112694453,112694749,112695416,112696148,112696437,112696630,112697994,112698287,112698715,112699685,112699894,112700219,112700416	112674729,112675049,112689138,112689650,112690098,112691799,112692929,112694172,112694629,112694896,112695574,112696251,112696534,112696846,112698111,112698478,112698789,112699810,112699982,112700340,112700746	Gene ID= ENSG00000155363.18 TPM= 3.72 Transcript Type= protein_coding
chr1	112685185	112688227	112685185	112688227	-	transcript6143.chr1.nnic@NA	transcript6143.chr1.nnic	NA	112685185	112688227	Gene ID= novel_gene_chr1_6144 TPM= 4.25 Transcript Type= NA
chr1	112701131	112707434	112701131	112707434	-	ENST00000369642.7@RHOC	ENST00000369642.7	protein_coding	112707078,112703644,112702999,112702563,112701131	112707434,112703806,112703119,112702693,112701713	Gene ID= ENSG00000155366.16 TPM= 107.63 Transcript Type= protein_coding
chr1	112701106	112707403	112701106	112707403	-	ENST00000339083.11@RHOC	ENST00000339083.11	protein_coding	112707078,112705100,112703644,112702999,112702563,112701106	112707403,112705168,112703806,112703119,112702693,112701713	Gene ID= ENSG00000155366.16 TPM= 121.44 Transcript Type= protein_coding
chr1	112709998	112715287	112709998	112715287	-	transcript6146.chr1.nic@PPM1J	transcript6146.chr1.nic	protein_coding	112714058,112713497,112712744,112712345,112711971,112711266,112711008,112710744,112710460,112709998	112715287,112713611,112713031,112712457,112712055,112711384,112711071,112710851,112710611,112710310	Gene ID= ENSG00000155367.15 TPM= 10.09 Transcript Type= NA
chr1	112709994	112715477	112709994	112715477	-	ENST00000309276.10@PPM1J	ENST00000309276.10	protein_coding	112714976,112713497,112712744,112712345,112711971,112711266,112711008,112710744,112710460,112709994	112715477,112713611,112713031,112712457,112712055,112711384,112711071,112710851,112710611,112710310	Gene ID= ENSG00000155367.15 TPM= 50.45 Transcript Type= protein_coding
chr1	112709998	112715336	112709998	112715336	-	transcript6154.chr1.nic@PPM1J	transcript6154.chr1.nic	protein_coding	112714976,112713497,112712345,112711971,112711266,112710744,112709998	112715336,112713611,112713031,112712055,112711384,112710851,112710611	Gene ID= ENSG00000155367.15 TPM= 2.12 Transcript Type= NA
chr1	112720577	112727235	112720577	112727235	+	ENST00000361886.3@FAM19A3	ENST00000361886.3	protein_coding	112720577,112722233,112723016,112724013,112726629	112720634,112722348,112723165,112724137,112727235	Gene ID= ENSG00000184599.13 TPM= 1.06 Transcript Type= protein_coding
chr1	112911847	112956353	112911847	112956353	-	ENST00000369626.7@SLC16A1	ENST00000369626.7	protein_coding	112956035,112929092,112921990,112917178,112911847	112956353,112929352,112922133,112918044,112914165	Gene ID= ENSG00000155380.11 TPM= 9.56 Transcript Type= protein_coding
chr1	113011687	113073105	113011687	113073105	-	ENST00000421157.1@AL357055.3	ENST00000421157.1	lincRNA	113072939,113048423,113011687	113073105,113048561,113013839	Gene ID= ENSG00000238198.1 TPM= 1.06 Transcript Type= lincRNA
chr1	113033499	113033871	113033499	113033871	-	transcript6173.chr1.nnic@NA	transcript6173.chr1.nnic	NA	113033499	113033871	Gene ID= novel_gene_chr1_6174 TPM= 2.12 Transcript Type= NA
chr1	113705765	113759900	113705765	113759900	-	transcript6194.chr1.nnic@PHTF1	transcript6194.chr1.nnic	protein_coding	113759023,113758659,113757699,113749506,113738730,113738110,113726418,113724759,113713279,113711940,113711746,113710254,113706594,113705765	113759900,113758733,113757755,113749589,113738799,113738268,113726574,113724893,113713438,113712113,113711835,113710475,113706722,113706162	Gene ID= ENSG00000116793.15 TPM= 2.12 Transcript Type= NA
chr1	113705765	113759526	113705765	113759526	-	transcript6195.chr1.nic@PHTF1	transcript6195.chr1.nic	protein_coding	113759023,113758659,113757699,113738730,113738110,113726418,113724759,113713279,113711940,113711746,113710254,113706594,113705765	113759526,113758733,113757755,113738799,113738268,113726574,113724893,113713438,113712113,113711835,113710475,113706722,113706162	Gene ID= ENSG00000116793.15 TPM= 3.19 Transcript Type= NA
chr1	113749229	113759523	113749229	113759523	-	transcript6199.chr1.nic@PHTF1	transcript6199.chr1.nic	protein_coding	113759023,113758659,113757699,113749229	113759523,113758733,113757755,113749589	Gene ID= ENSG00000116793.15 TPM= 2.12 Transcript Type= NA
chr1	113749229	113759388	113749229	113759388	-	transcript6200.chr1.nic@PHTF1	transcript6200.chr1.nic	protein_coding	113759023,113758659,113757699,113749229	113759388,113758848,113757755,113749589	Gene ID= ENSG00000116793.15 TPM= 2.12 Transcript Type= NA
chr1	113697205	113759476	113697205	113759476	-	ENST00000369604.5@PHTF1	ENST00000369604.5	protein_coding	113759023,113758659,113757699,113738730,113738110,113726418,113724759,113713279,113711940,113711746,113710254,113706594,113705890,113704666,113704081,113700794,113699704,113698262,113697205	113759476,113758733,113757755,113738799,113738268,113726574,113724893,113713438,113712113,113711835,113710475,113706722,113706162,113704797,113704167,113700949,113699799,113698387,113697725	Gene ID= ENSG00000116793.15 TPM= 5.31 Transcript Type= protein_coding
chr1	113761832	113812476	113761832	113812476	-	ENST00000261441.9@RSBN1	ENST00000261441.9	protein_coding	113811710,113797363,113777671,113777210,113768222,113767099,113761832	113812476,113798036,113777808,113777352,113768389,113767207,113766453	Gene ID= ENSG00000081019.13 TPM= 2.12 Transcript Type= protein_coding
chr1	113894748	113904998	113894748	113904998	-	ENST00000369569.5@AP4B1	ENST00000369569.5	protein_coding	113904605,113902638,113901755,113901236,113899904,113898718,113897840,113896258,113895757,113894748	113904998,113902862,113901885,113901383,113900400,113898801,113897943,113896465,113896038,113895492	Gene ID= ENSG00000134262.12 TPM= 5.31 Transcript Type= protein_coding
chr1	113905141	113914086	113905141	113914086	+	ENST00000369563.3@DCLRE1B	ENST00000369563.3	protein_coding	113905141,113906996,113908009,113911131	113905775,113907161,113908191,113914086	Gene ID= ENSG00000118655.4 TPM= 2.12 Transcript Type= protein_coding
chr1	113979443	113982254	113979443	113982254	+	ENST00000320334.4@OLFML3	ENST00000320334.4	protein_coding	113979443,113980332,113980949	113979630,113980617,113982254	Gene ID= ENSG00000116774.11 TPM= 29.74 Transcript Type= protein_coding
chr1	114397608	114511224	114397608	114511224	-	transcript6222.chr1.nic@TRIM33	transcript6222.chr1.nic	protein_coding	114510551,114464270,114463412,114463104,114433617,114430798,114427748,114427177,114425449,114424591,114421436,114420380,114410184,114408677,114406941,114405410,114402760,114401389,114399457,114397608	114511224,114464388,114463556,114463236,114433733,114430912,114427894,114427294,114425723,114424755,114421636,114420451,114410316,114408740,114407100,114405759,114402883,114401463,114399609,114397860	Gene ID= ENSG00000197323.11 TPM= 3.9 Transcript Type= NA
chr1	114397608	114511224	114397608	114511224	-	transcript6225.chr1.nnic@TRIM33	transcript6225.chr1.nnic	protein_coding	114510551,114464270,114463412,114463104,114433617,114427748,114427177,114425449,114424591,114421436,114410184,114408677,114406941,114405410,114402760,114401389,114399457,114397608	114511224,114464388,114463556,114463236,114433733,114427894,114427294,114425723,114424755,114421636,114410316,114408740,114407100,114405759,114402883,114401463,114399609,114397860	Gene ID= ENSG00000197323.11 TPM= 2.84 Transcript Type= NA
chr1	114397608	114511160	114397608	114511160	-	ENST00000369543.6@TRIM33	ENST00000369543.6	protein_coding	114510551,114464270,114463412,114463104,114433617,114430798,114427748,114427177,114425449,114424591,114421436,114410184,114408677,114406941,114405410,114402760,114401389,114399457,114397608	114511160,114464388,114463556,114463236,114433733,114430912,114427894,114427294,114425723,114424755,114421636,114410316,114408740,114407100,114405759,114402883,114401463,114399609,114397860	Gene ID= ENSG00000197323.11 TPM= 10.27 Transcript Type= protein_coding
chr1	114567557	114581639	114567557	114581639	-	ENST00000369541.3@BCAS2	ENST00000369541.3	protein_coding	114581499,114581299,114576688,114575590,114570700,114569992,114567557	114581639,114581391,114576758,114575751,114570750,114570072,114568256	Gene ID= ENSG00000116752.5 TPM= 32.93 Transcript Type= protein_coding
chr1	114704469	114716894	114704469	114716894	-	ENST00000369535.4@NRAS	ENST00000369535.4	protein_coding	114716658,114716050,114713800,114709569,114708531,114708154,114704469	114716894,114716177,114713978,114709728,114708654,114708192,114708050	Gene ID= ENSG00000213281.4 TPM= 12.75 Transcript Type= protein_coding
chr1	114716914	114758050	114716914	114758050	-	ENST00000610726.4@CSDE1	ENST00000610726.4	protein_coding	114757925,114749821,114741527,114739692,114737963,114737471,114736758,114734442,114733989,114733732,114732604,114730508,114730258,114726983,114726211,114725221,114723883,114720539,114719579,114718613,114716914	114758050,114750207,114741673,114739890,114738072,114737563,114736855,114734523,114734117,114733857,114732816,114730648,114730422,114727090,114726386,114725333,114724002,114720717,114719742,114718745,114718216	Gene ID= ENSG00000009307.15 TPM= 27.13 Transcript Type= protein_coding
chr1	114716913	114757983	114716913	114757983	-	ENST00000339438.10@CSDE1	ENST00000339438.10	protein_coding	114757925,114749821,114739692,114737963,114736758,114734442,114733989,114733732,114732604,114730508,114730258,114726983,114726211,114725221,114723883,114720539,114719579,114718613,114716913	114757983,114750207,114739890,114738072,114736855,114734523,114734117,114733857,114732816,114730648,114730422,114727090,114726386,114725333,114724002,114720717,114719742,114718745,114718216	Gene ID= ENSG00000009307.15 TPM= 26.51 Transcript Type= protein_coding
chr1	114716917	114757964	114716917	114757964	-	ENST00000358528.8@CSDE1	ENST00000358528.8	protein_coding	114757925,114749821,114739692,114737963,114737471,114736758,114734442,114733989,114733732,114732604,114730508,114730258,114726983,114726211,114725221,114723883,114720539,114719579,114718613,114716917	114757964,114750207,114739890,114738072,114737563,114736855,114734523,114734117,114733857,114732816,114730648,114730422,114727090,114726386,114725333,114724002,114720717,114719742,114718745,114718216	Gene ID= ENSG00000009307.15 TPM= 16.09 Transcript Type= protein_coding
chr1	114717295	114757974	114717295	114757974	-	ENST00000261443.9@CSDE1	ENST00000261443.9	protein_coding	114757925,114739692,114737963,114736758,114734442,114733989,114733732,114732604,114730508,114730258,114726983,114726211,114725221,114723883,114720539,114719579,114718613,114717295	114757974,114739890,114738072,114736855,114734523,114734117,114733857,114732816,114730648,114730422,114727090,114726386,114725333,114724002,114720717,114719742,114718745,114718216	Gene ID= ENSG00000009307.15 TPM= 32.46 Transcript Type= protein_coding
chr1	114717312	114758003	114717312	114758003	-	ENST00000369530.5@CSDE1	ENST00000369530.5	protein_coding	114757925,114749821,114741527,114739692,114737963,114736758,114734442,114733989,114733732,114732604,114730508,114730258,114726983,114726211,114725221,114723883,114720539,114719579,114718613,114717312	114758003,114750207,114741673,114739890,114738072,114736855,114734523,114734117,114733857,114732816,114730648,114730422,114727090,114726386,114725333,114724002,114720717,114719742,114718745,114718216	Gene ID= ENSG00000009307.15 TPM= 296.45 Transcript Type= protein_coding
chr1	114769479	114780685	114769479	114780685	-	ENST00000369528.9@SIKE1	ENST00000369528.9	protein_coding	114780437,114780110,114779142,114776346,114769479	114780685,114780215,114779284,114776459,114774372	Gene ID= ENSG00000052723.11 TPM= 25.49 Transcript Type= protein_coding
chr1	114779107	114780685	114779107	114780685	-	ENST00000466657.1@SIKE1	ENST00000466657.1	protein_coding	114780449,114779107	114780685,114779284	Gene ID= ENSG00000052723.11 TPM= 2.12 Transcript Type= processed_transcript
chr1	114779107	114780634	114779107	114780634	-	ENST00000475335.5@SIKE1	ENST00000475335.5	protein_coding	114780449,114780110,114779107	114780634,114780215,114779284	Gene ID= ENSG00000052723.11 TPM= 3.19 Transcript Type= processed_transcript
chr1	115283034	115368072	115283034	115368072	+	ENST00000425449.1@AL512638.2	ENST00000425449.1	antisense_RNA	115283034,115365670	115283240,115368072	Gene ID= ENSG00000228035.1 TPM= 1.06 Transcript Type= antisense_RNA
chr1	115285918	115338236	115285918	115338236	-	ENST00000369512.2@NGF	ENST00000369512.2	protein_coding	115338204,115293627,115285918	115338236,115293750,115286807	Gene ID= ENSG00000134259.3 TPM= 8.5 Transcript Type= protein_coding
chr1	115641953	115698224	115641953	115698224	+	ENST00000355485.6@VANGL1	ENST00000355485.6	protein_coding	115641953,115651277,115659641,115663661,115682364,115683944,115685293,115691119	115642086,115651484,115659773,115664268,115682497,115684076,115685527,115698224	Gene ID= ENSG00000173218.14 TPM= 6.37 Transcript Type= protein_coding
chr1	115700007	115768781	115700007	115768781	-	ENST00000261448.5@CASQ2	ENST00000261448.5	protein_coding	115768308,115744828,115740728,115738224,115732901,115726992,115725508,115717840,115705192,115702921,115700007	115768781,115744912,115740828,115738335,115732974,115727122,115725553,115717894,115705292,115702995,115701426	Gene ID= ENSG00000118729.11 TPM= 1564.56 Transcript Type= protein_coding
chr1	115976478	116069535	115976478	116069535	+	transcript6370.chr1.nnic@SLC22A15	transcript6370.chr1.nnic	protein_coding	115976478,115992031,116019582,116020721,116026893,116031403,116032647,116033758,116035187,116037303,116062762,116064436,116066520,116067019	115976714,115992243,116019714,116020885,116027022,116031581,116032800,116033871,116035327,116037388,116062882,116064508,116066708,116069535	Gene ID= ENSG00000163393.12 TPM= 2.12 Transcript Type= NA
chr1	115976498	116070054	115976498	116070054	+	ENST00000369503.8@SLC22A15	ENST00000369503.8	protein_coding	115976498,115992031,116019582,116020721,116026893,116031366,116035187,116037303,116062762,116064436,116066520,116067019	115976714,115992243,116019714,116020885,116027022,116031581,116035327,116037388,116062882,116064508,116066708,116070054	Gene ID= ENSG00000163393.12 TPM= 2.12 Transcript Type= protein_coding
chr1	116373867	116404772	116373867	116404772	+	ENST00000537345.5@ATP1A1	ENST00000537345.5	protein_coding	116373867,116384014,116384783,116387288,116388131,116388638,116388902,116389439,116390213,116390782,116392854,116393531,116395110,116396598,116397888,116398621,116398930,116399420,116400861,116401130,116401554,116403884,116404416	116374241,116384124,116384842,116387491,116388244,116388772,116389019,116389707,116390411,116390891,116392988,116393723,116395285,116396734,116398038,116398789,116399084,116399543,116401006,116401260,116401655,116403975,116404772	Gene ID= ENSG00000163399.15 TPM= 46.74 Transcript Type= protein_coding
chr1	116373260	116404774	116373260	116404774	+	ENST00000295598.9@ATP1A1	ENST00000295598.9	protein_coding	116373260,116384014,116384783,116387288,116388131,116388638,116388902,116389439,116390213,116390782,116392854,116393531,116395110,116396598,116397888,116398621,116398930,116399420,116400861,116401130,116401554,116403884,116404416	116373523,116384124,116384842,116387491,116388244,116388772,116389019,116389707,116390411,116390891,116392988,116393723,116395285,116396734,116398038,116398789,116399084,116399543,116401006,116401260,116401655,116403975,116404774	Gene ID= ENSG00000163399.15 TPM= 167.82 Transcript Type= protein_coding
chr1	116373269	116386144	116373269	116386144	+	ENST00000488733.1@ATP1A1	ENST00000488733.1	protein_coding	116373269,116384014,116384783	116373523,116384124,116386144	Gene ID= ENSG00000163399.15 TPM= 2.12 Transcript Type= retained_intron
chr1	116373696	116375125	116373696	116375125	+	transcript6384.chr1.nnic@NA	transcript6384.chr1.nnic	NA	116373696	116375125	Gene ID= novel_gene_chr1_6385 TPM= 4.25 Transcript Type= NA
chr1	116404716	116418572	116404716	116418572	-	transcript6382.chr1.nnic@ATP1A1-AS1	transcript6382.chr1.nnic	processed_transcript	116418459,116404716	116418572,116406148	Gene ID= ENSG00000203865.9 TPM= 6.37 Transcript Type= NA
chr1	116514535	116571039	116514535	116571039	-	ENST00000369489.9@CD58	ENST00000369489.9	protein_coding	116570903,116544311,116535965,116521906,116519231,116514535	116571039,116544604,116536228,116521983,116519267,116514822	Gene ID= ENSG00000116815.15 TPM= 44.61 Transcript Type= protein_coding
chr1	116521787	116571039	116521787	116571039	-	ENST00000369487.3@CD58	ENST00000369487.3	protein_coding	116570903,116544311,116535965,116521787	116571039,116544604,116536228,116521983	Gene ID= ENSG00000116815.15 TPM= 2.12 Transcript Type= protein_coding
chr1	116910057	116990358	116910057	116990358	+	ENST00000393203.2@PTGFRN	ENST00000393203.2	protein_coding	116910057,116941715,116944679,116949192,116961243,116966911,116974216,116984680,116986801	116910252,116942083,116945092,116949572,116961668,116967330,116974323,116984985,116990358	Gene ID= ENSG00000134247.9 TPM= 300.59 Transcript Type= protein_coding
chr1	116982806	116985552	116982806	116985552	+	transcript6405.chr1.nnic@NA	transcript6405.chr1.nnic	NA	116982806	116985552	Gene ID= novel_gene_chr1_6406 TPM= 2.12 Transcript Type= NA
chr1	117060303	117107453	117060303	117107453	+	ENST00000369466.8@TTF2	ENST00000369466.8	protein_coding	117060303,117060455,117062387,117073661,117074870,117076180,117076641,117077916,117079568,117081828,117084018,117086417,117088801,117090055,117090532,117091328,117091817,117092731,117095309,117096149,117097351,117098833,117101380	117060374,117060557,117062473,117073727,117075859,117076294,117076823,117078043,117079649,117081947,117084168,117086522,117088982,117090208,117090623,117091410,117091950,117092901,117095367,117096299,117097433,117098907,117107453	Gene ID= ENSG00000116830.11 TPM= 1.06 Transcript Type= protein_coding
chr1	117111060	117121750	117111060	117121750	-	transcript6413.chr1.nic@TRIM45	transcript6413.chr1.nic	protein_coding	117121606,117120714,117118034,117116616,117115575,117113359,117112095,117111060	117121750,117120901,117118767,117116745,117115689,117113485,117112453,117111212	Gene ID= ENSG00000134253.9 TPM= 7.44 Transcript Type= NA
chr1	117111060	117121728	117111060	117121728	-	ENST00000256649.8@TRIM45	ENST00000256649.8	protein_coding	117120714,117118034,117116616,117115575,117113359,117111060	117121728,117118767,117116745,117115689,117113485,117112453	Gene ID= ENSG00000134253.9 TPM= 9.56 Transcript Type= protein_coding
chr1	117149295	117150787	117149295	117150787	-	transcript6424.chr1.nnic@NA	transcript6424.chr1.nnic	NA	117149295	117150787	Gene ID= novel_gene_chr1_6425 TPM= 3.19 Transcript Type= NA
chr1	117366899	117525350	117366899	117525350	+	transcript6427.chr1.nic@MAN1A2	transcript6427.chr1.nic	protein_coding	117366899,117402186,117405549,117414713,117420569,117442231,117460489,117466334,117493147,117496763,117499382,117502855,117522825,117523250	117368485,117402441,117405645,117414831,117420649,117442325,117460612,117466427,117493262,117496982,117499554,117502970,117522937,117525350	Gene ID= ENSG00000198162.12 TPM= 3.19 Transcript Type= NA
chr1	117605934	117628372	117605934	117628372	+	ENST00000369448.3@FAM46C	ENST00000369448.3	protein_coding	117605934,117622842	117606153,117628372	Gene ID= ENSG00000183508.4 TPM= 5.31 Transcript Type= protein_coding
chr1	119031221	119140671	119031221	119140671	-	ENST00000235521.4@WARS2	ENST00000235521.4	protein_coding	119140555,119076350,119045582,119042264,119034095,119031221	119140671,119076607,119045662,119042349,119034213,119033359	Gene ID= ENSG00000116874.11 TPM= 12.75 Transcript Type= protein_coding
chr1	119711715	119744226	119711715	119744226	+	ENST00000641023.1@PHGDH	ENST00000641023.1	protein_coding	119711715,119721170,119723376,119726851,119727004,119734634,119735295,119737114,119740386,119741767,119742807,119743886	119712160,119721321,119723441,119726905,119727102,119734766,119735443,119737266,119740518,119741897,119743044,119744226	Gene ID= ENSG00000092621.12 TPM= 7.44 Transcript Type= protein_coding
chr1	119912054	119915765	119912054	119915765	-	transcript6463.chr1.nnic@NA	transcript6463.chr1.nnic	NA	119912054	119915765	Gene ID= novel_gene_chr1_6464 TPM= 4.25 Transcript Type= NA
chr1	120157291	120176549	120157291	120176549	-	transcript6472.chr1.nic@SEC22B	transcript6472.chr1.nic	protein_coding	120176307,120168840,120163210,120160384,120157291	120176549,120168949,120163370,120160530,120159402	Gene ID= ENSG00000265808.3 TPM= 2.12 Transcript Type= NA
chr1	120277703	120327674	120277703	120327674	+	transcript6477.chr1.nnic@AC244669.2	transcript6477.chr1.nnic	unprocessed_pseudogene	120277703,120319191,120319504,120327175	120278036,120319314,120319679,120327674	Gene ID= ENSG00000274642.1 TPM= 21.24 Transcript Type= NA
chr1	120415017	120443918	120415017	120443918	+	transcript6493.chr1.nnic@NBPF8	transcript6493.chr1.nnic	unprocessed_pseudogene	120415017,120417175,120417622,120419850,120425747,120427706,120436232,120436488,120442978	120415304,120417292,120417811,120420118,120425845,120427847,120436390,120436627,120443918	Gene ID= ENSG00000270231.3 TPM= 2.12 Transcript Type= NA
chr1	120536371	120620748	120536371	120620748	-	transcript6499.chr1.nic@AC241952.1	transcript6499.chr1.nic	transcribed_unprocessed_pseudogene	120620355,120579071,120578706,120573072,120550145,120548973,120548641,120548289,120545281,120544267,120543947,120543017,120541892,120538571,120538323,120536371	120620748,120579194,120578881,120573189,120550276,120549092,120548733,120548501,120545439,120544380,120544084,120543196,120542086,120538735,120538404,120536402	Gene ID= ENSG00000275131.2 TPM= 39.12 Transcript Type= NA
chr1	120536371	120620685	120536371	120620685	-	transcript6500.chr1.nnic@AC241952.1	transcript6500.chr1.nnic	transcribed_unprocessed_pseudogene	120620355,120573072,120550145,120548973,120548641,120548289,120545281,120544267,120543947,120543017,120541892,120538571,120538323,120536371	120620685,120573189,120550276,120549092,120548733,120548501,120545439,120544380,120544084,120543196,120542086,120538735,120538404,120536402	Gene ID= ENSG00000275131.2 TPM= 3.54 Transcript Type= NA
chr1	120505267	120508477	120505267	120508477	+	transcript6514.chr1.nnic@NA	transcript6514.chr1.nnic	NA	120505267	120508477	Gene ID= novel_gene_chr1_6515 TPM= 120.02 Transcript Type= NA
chr1	120723923	120793877	120723923	120793877	+	ENST00000624419.1@NBPF26	ENST00000624419.1	protein_coding	120723923,120763628,120784974,120793161,120793747,120793762	120724250,120763709,120785233,120793496,120793757,120793877	Gene ID= ENSG00000273136.6 TPM= 3.19 Transcript Type= protein_coding
chr1	121107176	121117291	121107176	121117291	-	transcript6521.chr1.nnic@AC244453.3	transcript6521.chr1.nnic	antisense_RNA	121116866,121109867,121107176	121117291,121110164,121108569	Gene ID= ENSG00000234998.1 TPM= 4.25 Transcript Type= NA
chr1	121235628	121236469	121235628	121236469	-	transcript6524.chr1.nnic@NA	transcript6524.chr1.nnic	NA	121235628	121236469	Gene ID= novel_gene_chr1_6525 TPM= 3.19 Transcript Type= NA
chr1	121396430	121460568	121396430	121460568	+	transcript6528.chr1.nnic@AC244021.1	transcript6528.chr1.nnic	lincRNA	121396430,121427982,121460019	121397304,121428064,121460568	Gene ID= ENSG00000227082.1 TPM= 3.19 Transcript Type= NA
chr1	121401583	121404571	121401583	121404571	+	transcript6533.chr1.nnic@NA	transcript6533.chr1.nnic	NA	121401583	121404571	Gene ID= novel_gene_chr1_6534 TPM= 3.19 Transcript Type= NA
chr1	144450983	144461615	144450983	144461615	-	transcript6543.chr1.nnic@NBPF15	transcript6543.chr1.nnic	protein_coding	144461381,144460843,144459366,144456537,144450983	144461615,144460961,144459483,144456805,144452149	Gene ID= ENSG00000266338.6 TPM= 2.12 Transcript Type= NA
chr1	145607990	145670463	145607990	145670463	+	ENST00000460277.5@GPR89A	ENST00000460277.5	protein_coding	145607990,145616234,145618320,145623054,145623593,145630687,145631664,145643869,145646184,145647175,145663329,145665562,145669625,145669834	145608175,145616293,145618423,145623160,145623714,145630807,145631744,145643978,145646272,145647267,145663424,145665651,145669690,145670463	Gene ID= ENSG00000117262.18 TPM= 10.62 Transcript Type= nonsense_mediated_decay
chr1	145746279	145823984	145746279	145823984	-	transcript6566.chr1.nnic@RNF115	transcript6566.chr1.nnic	protein_coding	145823772,145788908,145787012,145784539,145771711,145752978,145751438,145750407,145747995,145746279	145823984,145788966,145787063,145784596,145771919,145753049,145751510,145750500,145748110,145746997	Gene ID= ENSG00000265491.4 TPM= 11.86 Transcript Type= NA
chr1	145746279	145784629	145746279	145784629	-	transcript6579.chr1.nic@RNF115	transcript6579.chr1.nic	protein_coding	145784539,145771711,145752978,145751438,145750407,145747995,145746279	145784629,145771919,145753049,145751510,145750500,145748110,145746997	Gene ID= ENSG00000265491.4 TPM= 3.37 Transcript Type= NA
chr1	145738868	145824077	145738868	145824077	-	ENST00000582693.4@RNF115	ENST00000582693.4	protein_coding	145823772,145788908,145784539,145771711,145752978,145751438,145750407,145747995,145738868	145824077,145788966,145784596,145771919,145753049,145751510,145750500,145748110,145746997	Gene ID= ENSG00000265491.4 TPM= 6.55 Transcript Type= protein_coding
chr1	145783264	145783842	145783264	145783842	+	transcript6587.chr1.nnic@NA	transcript6587.chr1.nnic	NA	145783264	145783842	Gene ID= novel_gene_chr1_6588 TPM= 2.12 Transcript Type= NA
chr1	145824229	145842505	145824229	145842505	+	ENST00000334163.3@POLR3C	ENST00000334163.3	protein_coding	145824229,145825757,145826454,145826820,145828749,145833260,145833490,145836494,145836815,145837536,145838056,145839890,145840116,145840922,145842339	145824369,145825923,145826709,145827005,145828837,145833364,145833582,145836574,145836866,145837596,145838206,145839991,145840165,145841071,145842505	Gene ID= ENSG00000186141.8 TPM= 5.31 Transcript Type= protein_coding
chr1	145845629	145848953	145845629	145848953	+	ENST00000334513.5@NUDT17	ENST00000334513.5	protein_coding	145845629,145846013,145846433,145846598,145847250,145847583,145848112,145848377	145845832,145846196,145846458,145846690,145847348,145847719,145848264,145848953	Gene ID= ENSG00000186364.11 TPM= 1.06 Transcript Type= protein_coding
chr1	145848522	145859080	145848522	145859080	-	ENST00000393045.6@PIAS3	ENST00000393045.6	protein_coding	145858967,145856589,145856347,145856068,145855736,145854746,145854458,145853813,145853504,145851020,145850771,145850453,145850232,145848522	145859080,145857006,145856431,145856118,145855826,145854880,145854563,145853886,145853664,145851153,145850939,145850586,145850269,145849712	Gene ID= ENSG00000131788.15 TPM= 19.12 Transcript Type= protein_coding
chr1	145848522	145859824	145848522	145859824	-	transcript6596.chr1.nic@PIAS3	transcript6596.chr1.nic	protein_coding	145859665,145856589,145856347,145856068,145855736,145854746,145854458,145853813,145853504,145851020,145850771,145850453,145850232,145848522	145859824,145857006,145856431,145856118,145855826,145854880,145854563,145853886,145853664,145851153,145850939,145850586,145850269,145849712	Gene ID= ENSG00000131788.15 TPM= 21.24 Transcript Type= NA
chr1	145911350	145918739	145911350	145918739	-	transcript6606.chr1.nic@PEX11B	transcript6606.chr1.nic	protein_coding	145918633,145917701,145916817,145912126,145911350	145918739,145917816,145917018,145912566,145911735	Gene ID= ENSG00000131779.10 TPM= 4.25 Transcript Type= NA
chr1	145911351	145918529	145911351	145918529	-	ENST00000537888.1@PEX11B	ENST00000537888.1	protein_coding	145918432,145917701,145916817,145911351	145918529,145917816,145917018,145912566	Gene ID= ENSG00000131779.10 TPM= 2.12 Transcript Type= protein_coding
chr1	145911350	145918837	145911350	145918837	-	ENST00000369306.7@PEX11B	ENST00000369306.7	protein_coding	145918633,145917701,145916817,145911350	145918837,145917816,145917018,145912566	Gene ID= ENSG00000131779.10 TPM= 36.11 Transcript Type= protein_coding
chr1	145934161	145935181	145934161	145935181	+	transcript6624.chr1.nnic@NA	transcript6624.chr1.nnic	NA	145934161	145935181	Gene ID= novel_gene_chr1_6625 TPM= 6.37 Transcript Type= NA
chr1	145960597	145978848	145960597	145978848	+	transcript6628.chr1.nnic@POLR3GL	transcript6628.chr1.nnic	protein_coding	145960597,145961362,145974825,145975307,145977084,145977483,145977778,145977983,145978361	145960705,145961573,145974991,145975436,145977152,145977539,145977851,145978096,145978848	Gene ID= ENSG00000121851.12 TPM= 5.31 Transcript Type= NA
chr1	145960597	145978848	145960597	145978848	+	transcript6631.chr1.nnic@POLR3GL	transcript6631.chr1.nnic	protein_coding	145960597,145974825,145975307,145977084,145977483,145977778,145977983,145978361	145960705,145974991,145975436,145977152,145977539,145977851,145978096,145978848	Gene ID= ENSG00000121851.12 TPM= 4.25 Transcript Type= NA
chr1	145964703	145978848	145964703	145978848	+	ENST00000369314.1@POLR3GL	ENST00000369314.1	protein_coding	145964703,145974825,145975307,145977084,145977483,145977778,145977983,145978361	145964768,145974991,145975436,145977152,145977539,145977851,145978096,145978848	Gene ID= ENSG00000121851.12 TPM= 37.18 Transcript Type= protein_coding
chr1	145992435	145996600	145992435	145996600	-	ENST00000582401.5@TXNIP	ENST00000582401.5	protein_coding	145996017,145995404,145995144,145994929,145994544,145994281,145994016,145992435	145996600,145995476,145995291,145995031,145994800,145994437,145994167,145993886	Gene ID= ENSG00000265972.5 TPM= 279.35 Transcript Type= protein_coding
chr1	145992436	145996578	145992436	145996578	-	transcript6640.chr1.nnic@NA	transcript6640.chr1.nnic	NA	145992436	145996578	Gene ID= novel_gene_chr1_6641 TPM= 30.8 Transcript Type= NA
chr1	146017470	146021735	146017470	146021735	-	transcript6646.chr1.nnic@HFE2	transcript6646.chr1.nnic	protein_coding	146021587,146019175,146017952,146017470	146021735,146019734,146018700,146017846	Gene ID= ENSG00000168509.19 TPM= 2.47 Transcript Type= NA
chr1	146017468	146021841	146017468	146021841	-	ENST00000336751.10@HFE2	ENST00000336751.10	protein_coding	146021587,146020135,146019175,146017468	146021841,146020320,146019734,146018700	Gene ID= ENSG00000168509.19 TPM= 14.87 Transcript Type= protein_coding
chr1	146017470	146021918	146017470	146021918	-	ENST00000357836.5@HFE2	ENST00000357836.5	protein_coding	146021587,146019175,146017470	146021918,146019734,146018700	Gene ID= ENSG00000168509.19 TPM= 33.99 Transcript Type= protein_coding
chr1	146017468	146021734	146017468	146021734	-	ENST00000475797.1@HFE2	ENST00000475797.1	protein_coding	146021587,146017468	146021734,146018700	Gene ID= ENSG00000168509.19 TPM= 8.85 Transcript Type= protein_coding
chr1	146017468	146021735	146017468	146021735	-	ENST00000497365.5@HFE2	ENST00000497365.5	protein_coding	146021587,146019698,146017468	146021735,146019734,146018700	Gene ID= ENSG00000168509.19 TPM= 12.03 Transcript Type= protein_coding
chr1	146938321	146954413	146938321	146954413	+	transcript6672.chr1.nnic@NBPF12	transcript6672.chr1.nnic	protein_coding	146938321,146943291,146951348	146939012,146943562,146954413	Gene ID= ENSG00000268043.7 TPM= 5.31 Transcript Type= NA
chr1	146938322	146940444	146938322	146940444	+	transcript6673.chr1.nnic@NA	transcript6673.chr1.nnic	NA	146938322	146940444	Gene ID= novel_gene_chr1_6674 TPM= 2.12 Transcript Type= NA
chr1	147155106	147172544	147155106	147172544	-	ENST00000254101.3@PRKAB2	ENST00000254101.3	protein_coding	147172429,147171989,147167767,147166846,147166498,147162440,147161712,147155106	147172544,147172167,147167933,147166939,147166618,147162573,147161780,147159642	Gene ID= ENSG00000131791.7 TPM= 6.9 Transcript Type= protein_coding
chr1	147155106	147172391	147155106	147172391	-	transcript6677.chr1.nic@PRKAB2	transcript6677.chr1.nic	protein_coding	147171989,147167767,147166846,147166498,147162440,147161712,147155106	147172391,147167933,147166939,147166618,147162573,147161780,147159642	Gene ID= ENSG00000131791.7 TPM= 8.5 Transcript Type= NA
chr1	147155106	147172421	147155106	147172421	-	transcript6681.chr1.nnic@PRKAB2	transcript6681.chr1.nnic	protein_coding	147171989,147166846,147162440,147161712,147155106	147172421,147166939,147162573,147161780,147159642	Gene ID= ENSG00000131791.7 TPM= 4.78 Transcript Type= NA
chr1	147155106	147172022	147155106	147172022	-	transcript6682.chr1.nnic@PRKAB2	transcript6682.chr1.nnic	protein_coding	147171989,147162440,147161712,147155106	147172022,147162573,147161780,147159642	Gene ID= ENSG00000131791.7 TPM= 4.78 Transcript Type= NA
chr1	147176852	147180180	147176852	147180180	+	transcript6688.chr1.nnic@NA	transcript6688.chr1.nnic	NA	147176852	147180180	Gene ID= novel_gene_chr1_6689 TPM= 3.19 Transcript Type= NA
chr1	147242655	147295762	147242655	147295762	+	transcript6693.chr1.nnic@CHD1L	transcript6693.chr1.nnic	protein_coding	147242655,147252623,147254870,147255813,147256531,147259837,147264422,147265932,147267426,147268782,147272171,147275354,147276104,147280026,147284351,147285324,147286298,147287635,147291482,147293608,147294409,147295431	147242830,147252735,147254976,147255927,147256562,147259918,147264584,147266087,147267518,147268878,147272281,147275468,147276257,147280191,147284499,147285487,147286500,147287733,147291552,147293722,147294517,147295762	Gene ID= ENSG00000131778.18 TPM= 3.19 Transcript Type= NA
chr1	147242684	147295762	147242684	147295762	+	ENST00000369258.8@CHD1L	ENST00000369258.8	protein_coding	147242684,147252623,147254870,147255813,147256531,147259837,147264422,147265932,147267426,147268782,147270932,147272171,147275354,147276104,147280026,147284351,147285324,147286298,147287635,147291482,147293608,147294409,147295431	147242830,147252735,147254976,147255927,147256562,147259918,147264584,147266087,147267518,147268878,147271005,147272281,147275468,147276257,147280191,147284499,147285487,147286500,147287733,147291552,147293722,147294517,147295762	Gene ID= ENSG00000131778.18 TPM= 16.99 Transcript Type= protein_coding
chr1	147261403	147264070	147261403	147264070	-	transcript6699.chr1.nnic@NA	transcript6699.chr1.nnic	NA	147261403	147264070	Gene ID= novel_gene_chr1_6700 TPM= 3.19 Transcript Type= NA
chr1	147928393	147993339	147928393	147993339	+	ENST00000314163.11@GPR89B	ENST00000314163.11	protein_coding	147928393,147936627,147938714,147943438,147943997,147953345,147954322,147966554,147968875,147969867,147986199,147988432,147992502,147992711	147928578,147936686,147938817,147943544,147944098,147953465,147954402,147966663,147968963,147969959,147986294,147988521,147992567,147993339	Gene ID= ENSG00000188092.14 TPM= 6.37 Transcript Type= protein_coding
chr1	147928393	147993339	147928393	147993339	+	ENST00000488165.5@GPR89B	ENST00000488165.5	protein_coding	147928393,147936627,147938714,147943438,147943977,147953345,147954322,147966554,147968875,147969867,147986199,147988432,147992502,147992711	147928578,147936686,147938817,147943544,147944098,147953465,147954402,147966663,147968963,147969959,147986294,147988521,147992567,147993339	Gene ID= ENSG00000188092.14 TPM= 2.12 Transcript Type= nonsense_mediated_decay
chr1	148317854	148319532	148317854	148319532	+	transcript6713.chr1.nnic@NA	transcript6713.chr1.nnic	NA	148317854	148319532	Gene ID= novel_gene_chr1_6714 TPM= 2.12 Transcript Type= NA
chr1	148889508	149033016	148889508	149033016	+	transcript6727.chr1.nnic@PDE4DIP	transcript6727.chr1.nnic	protein_coding	148889508,148929197,148931800,148932113,148937747,148960654,148961837,148962196,148962428,148965484,148966543,148966839,148967726,148968836,148972180,148972511,148974514,148977937,148978278,148979737,148981270,148991885,148998143,149001591,149002850,149003611,149004909,149007201,149008444,149009568,149010443,149012591,149016299,149017748,149018542,149020147,149021029,149024445,149026715,149027401,149028560,149029787,149030232,149031173,149031944	148889894,148929273,148931923,148932288,148937864,148960785,148961956,148962288,148962640,148965642,148966656,148966976,148967905,148969030,148972344,148972592,148974605,148978053,148978415,148979849,148981397,148991973,148998375,149002026,149003042,149003730,149005437,149007436,149008495,149009791,149010595,149012776,149016550,149017879,149018661,149020336,149021153,149024684,149026831,149027627,149028703,149029925,149030278,149031224,149033016	Gene ID= ENSG00000178104.19 TPM= 43.42 Transcript Type= NA
chr1	148889508	149033016	148889508	149033016	+	transcript6729.chr1.nic@PDE4DIP	transcript6729.chr1.nic	protein_coding	148889508,148929197,148931800,148932113,148937747,148960654,148961837,148962196,148962428,148965484,148966543,148966839,148967726,148968836,148972180,148972511,148974514,148977937,148978278,148979737,148981270,148991885,148998143,149001591,149002850,149003611,149004909,149007201,149008444,149009568,149010443,149012591,149016299,149017748,149018542,149020147,149021029,149024445,149026715,149027401,149028560,149029787,149030232,149032000	148889894,148929273,148931923,148932288,148937864,148960785,148961956,148962288,148962640,148965642,148966656,148966976,148967905,148969030,148972344,148972592,148974605,148978053,148978415,148979849,148981397,148991973,148998375,149001696,149003042,149003730,149005437,149007436,149008495,149009791,149010595,149012776,149016550,149017879,149018661,149020336,149021153,149024684,149026831,149027627,149028703,149029925,149030278,149033016	Gene ID= ENSG00000178104.19 TPM= 43.84 Transcript Type= NA
chr1	148889508	148981746	148889508	148981746	+	transcript6754.chr1.nic@PDE4DIP	transcript6754.chr1.nic	protein_coding	148889508,148929197,148931800,148932113,148937747,148960654,148961837,148962196,148962428,148965484,148966543,148966839,148967726,148968836,148972180,148972511,148974514,148977937,148978278,148979737,148981270	148889894,148929273,148931923,148932288,148937864,148960785,148961956,148962288,148962640,148965642,148966656,148966976,148967905,148969030,148972344,148972592,148974605,148978053,148978415,148979849,148981746	Gene ID= ENSG00000178104.19 TPM= 39 Transcript Type= NA
chr1	148889403	148932728	148889403	148932728	+	ENST00000464103.5@PDE4DIP	ENST00000464103.5	protein_coding	148889403,148889784,148929197,148931800,148932113	148889529,148889894,148929273,148931923,148932728	Gene ID= ENSG00000178104.19 TPM= 9.15 Transcript Type= protein_coding
chr1	148889463	149033016	148889463	149033016	+	ENST00000369356.8@PDE4DIP	ENST00000369356.8	protein_coding	148889463,148929197,148931800,148932113,148937747,148960654,148961837,148962196,148962428,148965484,148966543,148966839,148967726,148968836,148972180,148972511,148974514,148977937,148978278,148979737,148981270,148991885,148998143,149001591,149002850,149003611,149004909,149007201,149008444,149009568,149010443,149012591,149016299,149017748,149018542,149020147,149021029,149024445,149026715,149027401,149028560,149029787,149030232,149032000	148889894,148929273,148931923,148932288,148937864,148960785,148961956,148962288,148962640,148965642,148966656,148966976,148967905,148969030,148972344,148972592,148974605,148978053,148978415,148979849,148981397,148991973,148998375,149002026,149003042,149003730,149005437,149007436,149008495,149009791,149010595,149012776,149016550,149017879,149018661,149020336,149021153,149024684,149026831,149027627,149028703,149029925,149030278,149033016	Gene ID= ENSG00000178104.19 TPM= 441.08 Transcript Type= protein_coding
chr1	148889576	148932729	148889576	148932729	+	ENST00000369347.8@PDE4DIP	ENST00000369347.8	protein_coding	148889576,148929197,148931800,148932113	148889894,148929273,148931923,148932729	Gene ID= ENSG00000178104.19 TPM= 124.92 Transcript Type= protein_coding
chr1	148889609	148993882	148889609	148993882	+	ENST00000369349.7@PDE4DIP	ENST00000369349.7	protein_coding	148889609,148929197,148931800,148932113,148937747,148960654,148961837,148962196,148962428,148965484,148966543,148966839,148967726,148968836,148972180,148972511,148974514,148977937,148978278,148979737,148981270,148991885,148992255	148889894,148929273,148931923,148932288,148937864,148960785,148961956,148962288,148962640,148965642,148966656,148966976,148967905,148969030,148972344,148972592,148974605,148978053,148978415,148979849,148981397,148991973,148993882	Gene ID= ENSG00000178104.19 TPM= 9.15 Transcript Type= protein_coding
chr1	148943942	148949234	148943942	148949234	+	transcript6784.chr1.nnic@NA	transcript6784.chr1.nnic	NA	148943942	148949234	Gene ID= novel_gene_chr1_6785 TPM= 10.62 Transcript Type= NA
chr1	149187067	149240767	149187067	149240767	-	transcript6829.chr1.nnic@AC245297.1	transcript6829.chr1.nnic	unprocessed_pseudogene	149240377,149201014,149198361,149197996,149187067	149240767,149201090,149198484,149198171,149190531	Gene ID= ENSG00000215861.5 TPM= 89.74 Transcript Type= NA
chr1	149190286	149240744	149190286	149240744	-	transcript6840.chr1.nnic@AC245297.1	transcript6840.chr1.nnic	unprocessed_pseudogene	149240377,149201014,149198361,149197996,149190286	149240744,149201090,149198484,149198171,149190791	Gene ID= ENSG00000215861.5 TPM= 56.44 Transcript Type= NA
chr1	149785659	149793020	149785659	149793020	-	ENST00000428289.1@AC243772.2	ENST00000428289.1	antisense_RNA	149791958,149785659	149793020,149788138	Gene ID= ENSG00000233030.2 TPM= 1.06 Transcript Type= antisense_RNA
chr1	149884459	149886652	149884459	149886652	-	ENST00000369155.3@HIST2H2BE	ENST00000369155.3	protein_coding	149884459	149886652	Gene ID= ENSG00000184678.10 TPM= 37.18 Transcript Type= protein_coding
chr1	149899597	149900792	149899597	149900792	+	ENST00000369152.5@BOLA1	ENST00000369152.5	protein_coding	149899597,149900010	149899672,149900792	Gene ID= ENSG00000178096.8 TPM= 14.87 Transcript Type= protein_coding
chr1	149937812	150010676	149937812	150010676	-	ENST00000581312.5@OTUD7B	ENST00000581312.5	protein_coding	150010448,149977426,149971063,149967294,149965777,149964222,149959684,149950094,149949629,149948969,149947251,149937812	150010676,149977576,149971251,149967521,149965878,149964349,149959796,149950221,149949778,149949083,149947335,149945065	Gene ID= ENSG00000264522.5 TPM= 24.43 Transcript Type= protein_coding
chr1	150002210	150003963	150002210	150003963	-	transcript6884.chr1.nnic@NA	transcript6884.chr1.nnic	NA	150002210	150003963	Gene ID= novel_gene_chr1_6885 TPM= 2.12 Transcript Type= NA
chr1	150064376	150067666	150064376	150067666	-	transcript6906.chr1.nnic@NA	transcript6906.chr1.nnic	NA	150064376	150067666	Gene ID= novel_gene_chr1_6907 TPM= 5.31 Transcript Type= NA
chr1	150067312	150145327	150067312	150145327	+	ENST00000369130.7@VPS45	ENST00000369130.7	protein_coding	150067312,150068630,150072166,150076233,150076916,150077094,150077669,150081342,150081884,150082716,150091937,150092302,150093527,150110496,150144709	150067950,150068764,150072226,150076312,150076984,150077231,150077779,150081476,150081997,150082883,150092095,150092409,150093648,150110627,150145327	Gene ID= ENSG00000136631.12 TPM= 93.47 Transcript Type= protein_coding
chr1	150067370	150145326	150067370	150145326	+	transcript6894.chr1.nic@VPS45	transcript6894.chr1.nic	protein_coding	150067370,150068630,150072166,150076233,150076916,150077094,150077669,150081342,150081884,150082716,150091937,150092302,150093527,150110496,150144709	150067606,150068764,150072226,150076312,150076984,150077231,150077779,150081476,150081997,150082883,150092095,150092409,150093648,150110627,150145326	Gene ID= ENSG00000136631.12 TPM= 5.31 Transcript Type= NA
chr1	150149650	150159628	150149650	150159628	+	transcript6910.chr1.nic@PLEKHO1	transcript6910.chr1.nic	protein_coding	150149650,150150912,150156066,150156911,150157385,150158819	150149786,150151058,150156206,150157015,150157486,150159628	Gene ID= ENSG00000023902.13 TPM= 13.28 Transcript Type= NA
chr1	150149980	150160065	150149980	150160065	+	ENST00000369124.4@PLEKHO1	ENST00000369124.4	protein_coding	150149980,150150912,150156066,150156911,150157385,150158819	150150287,150151058,150156206,150157015,150157486,150160065	Gene ID= ENSG00000023902.13 TPM= 9.56 Transcript Type= protein_coding
chr1	150157052	150159628	150157052	150159628	+	transcript6920.chr1.nnic@NA	transcript6920.chr1.nnic	NA	150157052	150159628	Gene ID= novel_gene_chr1_6921 TPM= 2.12 Transcript Type= NA
chr1	150218417	150236156	150218417	150236156	-	ENST00000583931.5@ANP32E	ENST00000583931.5	protein_coding	150235733,150231777,150230571,150229072,150226608,150223186,150218417	150236156,150231926,150230693,150229237,150226795,150223240,150220761	Gene ID= ENSG00000143401.14 TPM= 42.31 Transcript Type= protein_coding
chr1	150218555	150236158	150218555	150236158	-	transcript6925.chr1.nic@ANP32E	transcript6925.chr1.nic	protein_coding	150235733,150231777,150230571,150229072,150226608,150223186,150218555	150236158,150231926,150230693,150229237,150226795,150223294,150220761	Gene ID= ENSG00000143401.14 TPM= 6.19 Transcript Type= NA
chr1	150218555	150234678	150218555	150234678	-	ENST00000616917.4@ANP32E	ENST00000616917.4	protein_coding	150234579,150231777,150230571,150229072,150226608,150223186,150218555	150234678,150231926,150230693,150229237,150226795,150223240,150220761	Gene ID= ENSG00000143401.14 TPM= 4.6 Transcript Type= protein_coding
chr1	150265406	150269303	150265406	150269303	-	ENST00000360244.8@APH1A	ENST00000360244.8	protein_coding	150268698,150267957,150267716,150267356,150267075,150265406	150269303,150268127,150267789,150267478,150267202,150266656	Gene ID= ENSG00000117362.12 TPM= 6.9 Transcript Type= protein_coding
chr1	150265404	150268999	150265404	150268999	-	ENST00000369109.7@APH1A	ENST00000369109.7	protein_coding	150268698,150267957,150267716,150267356,150267075,150266533,150265404	150268999,150268127,150267789,150267478,150267202,150266656,150266194	Gene ID= ENSG00000117362.12 TPM= 7.97 Transcript Type= protein_coding
chr1	150268200	150280916	150268200	150280916	+	ENST00000369102.5@C1orf54	ENST00000369102.5	protein_coding	150268200,150272284,150272799,150274087,150275741,150276522,150279643,150280835	150268820,150272413,150272863,150274170,150275799,150276632,150279741,150280916	Gene ID= ENSG00000118292.8 TPM= 4.25 Transcript Type= protein_coding
chr1	150272780	150280914	150272780	150280914	+	ENST00000369098.3@C1orf54	ENST00000369098.3	protein_coding	150272780,150274087,150275741,150276522,150280835	150272863,150274170,150275799,150276632,150280914	Gene ID= ENSG00000118292.8 TPM= 3.19 Transcript Type= protein_coding
chr1	150282543	150287093	150282543	150287093	+	ENST00000369095.5@CIART	ENST00000369095.5	protein_coding	150282543,150283208,150283805,150284426,150284597,150286430	150282618,150283633,150283880,150284504,150284708,150287093	Gene ID= ENSG00000159208.15 TPM= 4.6 Transcript Type= protein_coding
chr1	150282543	150287093	150282543	150287093	+	ENST00000369094.5@CIART	ENST00000369094.5	protein_coding	150282543,150283462,150283805,150284426,150284597,150286430	150282618,150283633,150283880,150284504,150284708,150287093	Gene ID= ENSG00000159208.15 TPM= 3.54 Transcript Type= protein_coding
chr1	150282819	150287093	150282819	150287093	+	ENST00000290363.5@CIART	ENST00000290363.5	protein_coding	150282819,150283805,150284426,150284597,150286430	150283633,150283880,150284504,150284708,150287093	Gene ID= ENSG00000159208.15 TPM= 1.41 Transcript Type= protein_coding
chr1	150293720	150308979	150293720	150308979	+	ENST00000614145.4@MRPS21	ENST00000614145.4	protein_coding	150293720,150294335,150308048	150293898,150294449,150308979	Gene ID= ENSG00000266472.5 TPM= 98.25 Transcript Type= protein_coding
chr1	150293920	150308979	150293920	150308979	+	ENST00000581066.2@MRPS21	ENST00000581066.2	protein_coding	150293920,150308048	150294449,150308979	Gene ID= ENSG00000266472.5 TPM= 2.66 Transcript Type= protein_coding
chr1	150321476	150353195	150321476	150353195	+	ENST00000324862.6@PRPF3	ENST00000324862.6	protein_coding	150321476,150324895,150325751,150328320,150332684,150332979,150334935,150338160,150340398,150343309,150344162,150344434,150346018,150346408,150349157,150352833	150321592,150325087,150325881,150328466,150332767,150333199,150335241,150338326,150340477,150343452,150344261,150344547,150346136,150346491,150349218,150353195	Gene ID= ENSG00000117360.12 TPM= 27.62 Transcript Type= protein_coding
chr1	150470784	150473710	150470784	150473710	+	transcript6973.chr1.nnic@NA	transcript6973.chr1.nnic	NA	150470784	150473710	Gene ID= novel_gene_chr1_6974 TPM= 6.37 Transcript Type= NA
chr1	150487401	150507598	150487401	150507598	+	transcript6978.chr1.nic@TARS2	transcript6978.chr1.nic	protein_coding	150487401,150487858,150488964,150490601,150491394,150491598,150492411,150496482,150496810,150497530,150498502,150498897,150499216,150504335,150504906,150505591,150506916	150487516,150488054,150489087,150490725,150491511,150491662,150492489,150496628,150496908,150497747,150498664,150499034,150499293,150504435,150504978,150505705,150507598	Gene ID= ENSG00000143374.16 TPM= 5.58 Transcript Type= NA
chr1	150487401	150507598	150487401	150507598	+	transcript6980.chr1.nnic@TARS2	transcript6980.chr1.nnic	protein_coding	150487401,150487858,150488964,150490601,150491394,150491598,150492411,150496810,150497530,150498502,150498897,150499216,150504335,150504632,150504906,150505591,150506916	150487516,150488054,150489087,150490725,150491511,150491662,150492489,150496908,150497747,150498664,150499034,150499293,150504435,150504733,150504978,150505705,150507598	Gene ID= ENSG00000143374.16 TPM= 7.7 Transcript Type= NA
chr1	150487417	150507602	150487417	150507602	+	ENST00000369064.7@TARS2	ENST00000369064.7	protein_coding	150487417,150487858,150488964,150490601,150491394,150491598,150492411,150496482,150496810,150497530,150498502,150498897,150499216,150504335,150504632,150504906,150505591,150506916	150487516,150488054,150489087,150490725,150491511,150491662,150492489,150496628,150496908,150497747,150498664,150499034,150499293,150504435,150504733,150504978,150505705,150507602	Gene ID= ENSG00000143374.16 TPM= 18.32 Transcript Type= protein_coding
chr1	150487420	150507284	150487420	150507284	+	ENST00000606933.5@TARS2	ENST00000606933.5	protein_coding	150487420,150487858,150488964,150490601,150491394,150491598,150492411,150497530,150498502,150498897,150499216,150504335,150504632,150504906,150505591,150506916	150487516,150488054,150489087,150490725,150491511,150491662,150492489,150497747,150498664,150499034,150499293,150504435,150504733,150504978,150505705,150507284	Gene ID= ENSG00000143374.16 TPM= 3.45 Transcript Type= protein_coding
chr1	150508085	150513789	150508085	150513789	+	ENST00000369047.8@ECM1	ENST00000369047.8	protein_coding	150508085,150509531,150509661,150509922,150510102,150510876,150511457,150512352,150512725,150513237	150508279,150509581,150509762,150510002,150510182,150511198,150511831,150512572,150512812,150513789	Gene ID= ENSG00000143369.14 TPM= 3.19 Transcript Type= protein_coding
chr1	150549408	150558748	150549408	150558748	+	ENST00000369041.9@ADAMTSL4	ENST00000369041.9	protein_coding	150549408,150549822,150552205,150552543,150552898,150553426,150554365,150555429,150556162,150556621,150556939,150557150,150557494,150557945,150558473	150549499,150549895,150552308,150552600,150553253,150554122,150554467,150555565,150556366,150556793,150557050,150557335,150557623,150558149,150558748	Gene ID= ENSG00000143382.14 TPM= 5.31 Transcript Type= protein_coding
chr1	150557199	150560932	150557199	150560932	+	transcript6991.chr1.nic@ADAMTSL4	transcript6991.chr1.nic	protein_coding	150557199,150559287,150559761,150560060	150559165,150559466,150559905,150560932	Gene ID= ENSG00000143382.14 TPM= 22.31 Transcript Type= NA
chr1	150574554	150579599	150574554	150579599	-	transcript6997.chr1.nic@MCL1	transcript6997.chr1.nic	protein_coding	150578843,150574554	150579599,150578491	Gene ID= ENSG00000143384.12 TPM= 23.9 Transcript Type= NA
chr1	150574556	150579590	150574556	150579590	-	ENST00000369026.2@MCL1	ENST00000369026.2	protein_coding	150578843,150578244,150574556	150579590,150578491,150577491	Gene ID= ENSG00000143384.12 TPM= 106.75 Transcript Type= protein_coding
chr1	150621251	150629596	150621251	150629596	-	ENST00000369014.9@ENSA	ENST00000369014.9	protein_coding	150629414,150627467,150625642,150621251	150629596,150627592,150625808,150622859	Gene ID= ENSG00000143420.18 TPM= 3.19 Transcript Type= protein_coding
chr1	150623281	150629577	150623281	150629577	-	ENST00000271690.12@ENSA	ENST00000271690.12	protein_coding	150629414,150627467,150623281	150629577,150627592,150625808	Gene ID= ENSG00000143420.18 TPM= 10.62 Transcript Type= protein_coding
chr1	150627054	150629577	150627054	150629577	-	ENST00000362052.7@ENSA	ENST00000362052.7	protein_coding	150629414,150627054	150629577,150627592	Gene ID= ENSG00000143420.18 TPM= 1.06 Transcript Type= protein_coding
chr1	150629801	150635723	150629801	150635723	+	transcript7006.chr1.nnic@NA	transcript7006.chr1.nnic	NA	150629801,150630459,150634831	150629993,150630502,150635723	Gene ID= novel_gene_chr1_7007 TPM= 2.12 Transcript Type= NA
chr1	150730196	150765957	150730196	150765957	-	ENST00000368985.7@CTSS	ENST00000368985.7	protein_coding	150765698,150764638,150757858,150755001,150751781,150750006,150747777,150730196	150765957,150764764,150757980,150755150,150752008,150750171,150747879,150733145	Gene ID= ENSG00000163131.10 TPM= 1.06 Transcript Type= protein_coding
chr1	150796208	150808323	150796208	150808323	-	ENST00000271651.7@CTSK	ENST00000271651.7	protein_coding	150808214,150806686,150806102,150805861,150804021,150799544,150799168,150796208	150808323,150806806,150806224,150806016,150804239,150799709,150799273,150796898	Gene ID= ENSG00000143387.12 TPM= 12.75 Transcript Type= protein_coding
chr1	150810094	150876604	150810094	150876604	-	transcript7024.chr1.nnic@ARNT	transcript7024.chr1.nnic	protein_coding	150876543,150861361,150858349,150852762,150846263,150842424,150839441,150836280,150834538,150832334,150831818,150829904,150829093,150826543,150823194,150817920,150817361,150817082,150816788,150816259,150814077,150813172,150810094	150876604,150861395,150858460,150852806,150846307,150842468,150839654,150836493,150834640,150832399,150831903,150829980,150829227,150826617,150823345,150818030,150817433,150817202,150816890,150816406,150814239,150813338,150812110	Gene ID= ENSG00000143437.20 TPM= 3.72 Transcript Type= NA
chr1	150811681	150876708	150811681	150876708	-	ENST00000515192.5@ARNT	ENST00000515192.5	protein_coding	150876543,150861247,150858349,150852762,150846263,150842424,150839441,150836280,150834538,150832334,150831818,150829904,150829093,150826543,150823194,150817920,150817361,150817082,150816788,150816259,150814077,150813172,150811681	150876708,150861302,150858460,150852806,150846307,150842468,150839654,150836493,150834640,150832399,150831903,150829965,150829227,150826617,150823345,150818030,150817433,150817202,150816890,150816406,150814239,150813338,150812110	Gene ID= ENSG00000143437.20 TPM= 1.06 Transcript Type= protein_coding
chr1	150809705	150876768	150809705	150876768	-	ENST00000358595.9@ARNT	ENST00000358595.9	protein_coding	150876543,150858349,150852762,150846263,150842424,150839441,150836280,150834538,150832334,150831818,150829904,150829093,150826543,150823194,150817920,150817361,150817082,150816788,150816259,150814077,150813172,150809705	150876768,150858460,150852806,150846307,150842468,150839654,150836493,150834640,150832399,150831903,150829980,150829227,150826617,150823345,150818030,150817433,150817202,150816890,150816406,150814239,150813338,150812110	Gene ID= ENSG00000143437.20 TPM= 4.78 Transcript Type= protein_coding
chr1	150926339	150964735	150926339	150964735	+	ENST00000271640.9@SETDB1	ENST00000271640.9	protein_coding	150926339,150927704,150929967,150939940,150941329,150942563,150942852,150943920,150944918,150946886,150949122,150949370,150950458,150951365,150959178,150960563,150962130,150962587,150962974,150963530,150963995,150964247	150926517,150927974,150930118,150939974,150941428,150942688,150943053,150943993,150945108,150947012,150949278,150949525,150951090,150951481,150959347,150961191,150962158,150962719,150963139,150963741,150964083,150964735	Gene ID= ENSG00000143379.12 TPM= 4.25 Transcript Type= protein_coding
chr1	150926364	150945320	150926364	150945320	+	transcript7055.chr1.nic@SETDB1	transcript7055.chr1.nic	protein_coding	150926364,150927704,150929967,150939940,150941329,150942563,150942852,150943920,150944918	150926517,150927974,150930118,150939974,150941428,150942688,150943053,150943993,150945320	Gene ID= ENSG00000143379.12 TPM= 3.19 Transcript Type= NA
chr1	150965173	150975003	150965173	150975003	-	ENST00000271688.10@CERS2	ENST00000271688.10	protein_coding	150974619,150968918,150968395,150968083,150967820,150967664,150967392,150967074,150966756,150966476,150965173	150975003,150969131,150968512,150968201,150967877,150967714,150967484,150967202,150966862,150966629,150966288	Gene ID= ENSG00000143418.19 TPM= 6.72 Transcript Type= protein_coding
chr1	150965259	150975161	150965259	150975161	-	transcript7047.chr1.nnic@CERS2	transcript7047.chr1.nnic	protein_coding	150975019,150968918,150968395,150968083,150967820,150967664,150967392,150967074,150966756,150966476,150965259	150975161,150969091,150968512,150968201,150967877,150967714,150967484,150967202,150966862,150966629,150966288	Gene ID= ENSG00000143418.19 TPM= 3.54 Transcript Type= NA
chr1	150965173	150975004	150965173	150975004	-	ENST00000368954.9@CERS2	ENST00000368954.9	protein_coding	150974619,150968918,150968395,150968083,150967820,150967664,150967392,150967074,150966756,150966476,150965173	150975004,150969091,150968512,150968201,150967877,150967714,150967484,150967202,150966862,150966629,150966288	Gene ID= ENSG00000143418.19 TPM= 53.46 Transcript Type= protein_coding
chr1	150993207	150994852	150993207	150994852	-	transcript7070.chr1.nnic@NA	transcript7070.chr1.nnic	NA	150993207	150994852	Gene ID= novel_gene_chr1_7071 TPM= 5.31 Transcript Type= NA
chr1	150996549	151006857	150996549	151006857	-	ENST00000312210.9@MINDY1	ENST00000312210.9	protein_coding	151006312,151002165,151001725,151001250,151000457,150999862,150999369,150998082,150997624,150996549	151006857,151002323,151001782,151001314,151000615,150999964,150999511,150998273,150997779,150997367	Gene ID= ENSG00000143409.15 TPM= 1.77 Transcript Type= protein_coding
chr1	150996835	151006900	150996835	151006900	-	transcript7064.chr1.nnic@MINDY1	transcript7064.chr1.nnic	protein_coding	151006312,151002165,151001725,151001250,151000457,150999862,150999369,150998082,150997624,150996835	151006900,151002968,151001782,151001314,151000615,150999964,150999511,150998273,150997752,150997367	Gene ID= ENSG00000143409.15 TPM= 3.9 Transcript Type= NA
chr1	151008520	151035713	151008520	151035713	+	transcript7074.chr1.nic@PRUNE1	transcript7074.chr1.nic	protein_coding	151008520,151017812,151018557,151024611,151025515,151027233,151028786,151033806	151008671,151017904,151018669,151024795,151025673,151027327,151028944,151035713	Gene ID= ENSG00000143363.15 TPM= 4.96 Transcript Type= NA
chr1	151008477	151035713	151008477	151035713	+	ENST00000271620.7@PRUNE1	ENST00000271620.7	protein_coding	151008477,151017812,151018467,151024611,151025515,151027233,151028786,151033806	151008671,151017904,151018669,151024795,151025673,151027327,151028944,151035713	Gene ID= ENSG00000143363.15 TPM= 16.64 Transcript Type= protein_coding
chr1	151008483	151035713	151008483	151035713	+	ENST00000368936.5@PRUNE1	ENST00000368936.5	protein_coding	151008483,151017812,151024611,151025515,151027233,151028786,151033806	151008671,151017904,151024795,151025673,151027327,151028944,151035713	Gene ID= ENSG00000143363.15 TPM= 3.9 Transcript Type= protein_coding
chr1	151047740	151051420	151047740	151051420	+	ENST00000368926.5@C1orf56	ENST00000368926.5	protein_coding	151047740,151050438	151048852,151051420	Gene ID= ENSG00000143443.9 TPM= 4.25 Transcript Type= protein_coding
chr1	151050973	151059649	151050973	151059649	-	ENST00000540998.5@CDC42SE1	ENST00000540998.5	protein_coding	151059479,151056651,151055677,151055016,151054231,151050973	151059649,151056786,151055993,151055126,151054321,151053327	Gene ID= ENSG00000197622.12 TPM= 4.33 Transcript Type= protein_coding
chr1	151050971	151070325	151050971	151070325	-	ENST00000439374.6@CDC42SE1	ENST00000439374.6	protein_coding	151070264,151068319,151067132,151059479,151055677,151055016,151054231,151050971	151070325,151068380,151067334,151059773,151055993,151055126,151054321,151053327	Gene ID= ENSG00000197622.12 TPM= 8.23 Transcript Type= protein_coding
chr1	151052659	151058143	151052659	151058143	-	transcript7091.chr1.nic@CDC42SE1	transcript7091.chr1.nic	protein_coding	151056651,151055677,151055016,151054231,151052659	151058143,151055993,151055126,151054321,151053327	Gene ID= ENSG00000197622.12 TPM= 2.12 Transcript Type= NA
chr1	151050973	151059620	151050973	151059620	-	transcript7098.chr1.nic@CDC42SE1	transcript7098.chr1.nic	protein_coding	151059479,151054231,151050973	151059620,151055993,151053327	Gene ID= ENSG00000197622.12 TPM= 6.46 Transcript Type= NA
chr1	151050973	151059649	151050973	151059649	-	ENST00000357235.5@CDC42SE1	ENST00000357235.5	protein_coding	151059479,151055677,151055016,151054231,151050973	151059649,151055993,151055126,151054321,151053327	Gene ID= ENSG00000197622.12 TPM= 8.58 Transcript Type= protein_coding
chr1	151057758	151068497	151057758	151068497	+	ENST00000368921.4@MLLT11	ENST00000368921.4	protein_coding	151057758,151067219	151060553,151068497	Gene ID= ENSG00000213190.3 TPM= 349.45 Transcript Type= protein_coding
chr1	151071455	151072981	151071455	151072981	-	transcript7110.chr1.nnic@NA	transcript7110.chr1.nnic	NA	151071455	151072981	Gene ID= novel_gene_chr1_7111 TPM= 4.25 Transcript Type= NA
chr1	151130026	151132604	151130026	151132604	-	transcript7108.chr1.nnic@NA	transcript7108.chr1.nnic	NA	151130026	151132604	Gene ID= novel_gene_chr1_7109 TPM= 8.5 Transcript Type= NA
chr1	151156915	151160253	151156915	151160253	+	transcript7114.chr1.nnic@NA	transcript7114.chr1.nnic	NA	151156915	151160253	Gene ID= novel_gene_chr1_7115 TPM= 20.18 Transcript Type= NA
chr1	151166042	151170297	151166042	151170297	+	ENST00000368905.8@SCNM1	ENST00000368905.8	protein_coding	151166042,151166471,151166934,151167121,151167326,151168144,151168986	151166203,151166541,151167022,151167218,151167414,151168338,151170297	Gene ID= ENSG00000163156.11 TPM= 12.75 Transcript Type= protein_coding
chr1	151166079	151169138	151166079	151169138	+	ENST00000368902.1@SCNM1	ENST00000368902.1	protein_coding	151166079,151166471,151166934,151167121,151167326,151168144,151168986	151166252,151166541,151167022,151167218,151167414,151168338,151169138	Gene ID= ENSG00000163156.11 TPM= 2.12 Transcript Type= protein_coding
chr1	151176304	151190213	151176304	151190213	-	ENST00000368892.8@VPS72	ENST00000368892.8	protein_coding	151190005,151185798,151185506,151184317,151178001,151176304	151190213,151185950,151185620,151184493,151178145,151177031	Gene ID= ENSG00000163159.12 TPM= 36.11 Transcript Type= protein_coding
chr1	151176971	151177401	151176971	151177401	+	transcript7123.chr1.nnic@NA	transcript7123.chr1.nnic	NA	151176971	151177401	Gene ID= novel_gene_chr1_7124 TPM= 2.12 Transcript Type= NA
chr1	151198551	151249536	151198551	151249536	+	ENST00000349792.9@PIP5K1A	ENST00000349792.9	protein_coding	151198551,151224248,151227320,151231671,151232248,151232551,151234197,151236558,151238182,151239130,151239955,151242123,151242438,151246920,151247863	151199081,151224279,151227400,151231801,151232365,151232703,151234496,151236763,151238265,151239178,151240039,151242269,151242567,151246965,151249536	Gene ID= ENSG00000143398.19 TPM= 22.31 Transcript Type= protein_coding
chr1	151254703	151267479	151254703	151267479	+	ENST00000368884.7@PSMD4	ENST00000368884.7	protein_coding	151254703,151262161,151263914,151264832,151265166,151265394,151266004,151266308,151266520,151267173	151254808,151262301,151264028,151264918,151265234,151265609,151266112,151266439,151266587,151267479	Gene ID= ENSG00000159352.15 TPM= 309.44 Transcript Type= protein_coding
chr1	151254709	151267459	151254709	151267459	+	ENST00000368881.8@PSMD4	ENST00000368881.8	protein_coding	151254709,151262161,151263914,151264832,151265166,151265394,151266004,151266308,151266520,151267173	151254808,151262301,151264028,151264918,151265234,151265609,151266121,151266439,151266587,151267459	Gene ID= ENSG00000159352.15 TPM= 16.28 Transcript Type= protein_coding
chr1	151254766	151256354	151254766	151256354	+	transcript7143.chr1.nnic@NA	transcript7143.chr1.nnic	NA	151254766	151256354	Gene ID= novel_gene_chr1_7144 TPM= 2.12 Transcript Type= NA
chr1	151292132	151327540	151292132	151327540	-	transcript7145.chr1.nic@PI4KB	transcript7145.chr1.nic	protein_coding	151327271,151324745,151315573,151310211,151307574,151306136,151303541,151302194,151301844,151298808,151294409,151294018,151292132	151327540,151324917,151316509,151310255,151307801,151306363,151303650,151302298,151301967,151299073,151294541,151294138,151293033	Gene ID= ENSG00000143393.16 TPM= 4.75 Transcript Type= NA
chr1	151292132	151327664	151292132	151327664	-	transcript7149.chr1.nic@PI4KB	transcript7149.chr1.nic	protein_coding	151327271,151324745,151315573,151307574,151306136,151303541,151302194,151301844,151298808,151294409,151294018,151292132	151327664,151324917,151316509,151307801,151306363,151303650,151302298,151301967,151299073,151294541,151294138,151293033	Gene ID= ENSG00000143393.16 TPM= 5.28 Transcript Type= NA
chr1	151292132	151327412	151292132	151327412	-	transcript7150.chr1.nic@PI4KB	transcript7150.chr1.nic	protein_coding	151327271,151326172,151315573,151307574,151306136,151303541,151302194,151301844,151298808,151294409,151294018,151292132	151327412,151326373,151316509,151307801,151306363,151303650,151302298,151301967,151299073,151294541,151294138,151293033	Gene ID= ENSG00000143393.16 TPM= 3.15 Transcript Type= NA
chr1	151291797	151327715	151291797	151327715	-	ENST00000368874.8@PI4KB	ENST00000368874.8	protein_coding	151327271,151315573,151307574,151306136,151303541,151302194,151301844,151298808,151294409,151294018,151291797	151327715,151316509,151307801,151306363,151303650,151302298,151301967,151299073,151294541,151294138,151293033	Gene ID= ENSG00000143393.16 TPM= 9.21 Transcript Type= protein_coding
chr1	151292133	151327657	151292133	151327657	-	ENST00000529142.5@PI4KB	ENST00000529142.5	protein_coding	151327271,151307574,151306136,151303541,151302194,151301844,151298808,151294409,151294018,151292133	151327657,151307801,151306363,151303650,151302298,151301967,151299073,151294541,151294138,151293033	Gene ID= ENSG00000143393.16 TPM= 4.22 Transcript Type= protein_coding
chr1	151292132	151327411	151292132	151327411	-	ENST00000368873.5@PI4KB	ENST00000368873.5	protein_coding	151327271,151315573,151310211,151307574,151306136,151303541,151302194,151301844,151298808,151294409,151294018,151292132	151327411,151316509,151310255,151307801,151306363,151303650,151302298,151301967,151299073,151294541,151294138,151293033	Gene ID= ENSG00000143393.16 TPM= 25.46 Transcript Type= protein_coding
chr1	151341829	151347326	151341829	151347326	-	ENST00000368870.6@RFX5	ENST00000368870.6	protein_coding	151347211,151346485,151346205,151345928,151345106,151344728,151344417,151344197,151343681,151343342,151341829	151347326,151346606,151346333,151345961,151345188,151344847,151344536,151344278,151343882,151343442,151343178	Gene ID= ENSG00000143390.17 TPM= 4.25 Transcript Type= protein_coding
chr1	151341960	151347357	151341960	151347357	-	ENST00000452671.6@RFX5	ENST00000452671.6	protein_coding	151347211,151346489,151346205,151345928,151345106,151344728,151344417,151344197,151343681,151343342,151341960	151347357,151346606,151346333,151345961,151345188,151344847,151344536,151344278,151343882,151343442,151343178	Gene ID= ENSG00000143390.17 TPM= 5.31 Transcript Type= protein_coding
chr1	151340640	151347251	151340640	151347251	-	ENST00000290524.8@RFX5	ENST00000290524.8	protein_coding	151347211,151346482,151346205,151345928,151345106,151344728,151344417,151344197,151343681,151343342,151340640	151347251,151346606,151346333,151345961,151345188,151344847,151344536,151344278,151343882,151343442,151343178	Gene ID= ENSG00000143390.17 TPM= 20.18 Transcript Type= protein_coding
chr1	151364302	151372733	151364302	151372733	-	ENST00000368868.9@SELENBP1	ENST00000368868.9	protein_coding	151372638,151369713,151369442,151369004,151368199,151366722,151366275,151365768,151365563,151365189,151364926,151364302	151372733,151369769,151369554,151369189,151368319,151366904,151366453,151365846,151365684,151365281,151365044,151364705	Gene ID= ENSG00000143416.20 TPM= 37.89 Transcript Type= protein_coding
chr1	151364305	151372703	151364305	151372703	-	ENST00000426705.6@SELENBP1	ENST00000426705.6	protein_coding	151372638,151369713,151369442,151369004,151368199,151366722,151366275,151365768,151365563,151365189,151364926,151364305	151372703,151369978,151369554,151369189,151368319,151366904,151366453,151365846,151365684,151365281,151365044,151364705	Gene ID= ENSG00000143416.20 TPM= 2.3 Transcript Type= protein_coding
chr1	151364304	151372716	151364304	151372716	-	transcript7173.chr1.nnic@SELENBP1	transcript7173.chr1.nnic	protein_coding	151372638,151369713,151368199,151366722,151366275,151365768,151365563,151365189,151364926,151364304	151372716,151369769,151368319,151366904,151366453,151365846,151365684,151365281,151365044,151364705	Gene ID= ENSG00000143416.20 TPM= 4.43 Transcript Type= NA
chr1	151399534	151401944	151399534	151401944	+	ENST00000290541.6@PSMB4	ENST00000290541.6	protein_coding	151399534,151399981,151400442,151400764,151401239,151401542,151401817	151399727,151400187,151400588,151400845,151401355,151401630,151401944	Gene ID= ENSG00000159377.10 TPM= 88.16 Transcript Type= protein_coding
chr1	151399558	151401936	151399558	151401936	+	transcript7187.chr1.nnic@NA	transcript7187.chr1.nnic	NA	151399558	151401936	Gene ID= novel_gene_chr1_7188 TPM= 2.12 Transcript Type= NA
chr1	151406399	151446779	151406399	151446779	-	transcript7176.chr1.nnic@POGZ	transcript7176.chr1.nnic	protein_coding	151442305,151442081,151440928,151430666,151429603,151428127,151427823,151424955,151423949,151423397,151412296,151411625,151408694,151408409,151408100,151407235,151406911,151406607,151406399	151446779,151442205,151441088,151430841,151429713,151428413,151428046,151425061,151424286,151423553,151412398,151411771,151408828,151408581,151408242,151407291,151407023,151406631,151406464	Gene ID= ENSG00000143442.21 TPM= 33.99 Transcript Type= NA
chr1	151540305	151583583	151540305	151583583	+	ENST00000368849.7@TUFT1	ENST00000368849.7	protein_coding	151540305,151562091,151562585,151563904,151564525,151566163,151569657,151574270,151574911,151578721,151579649,151580942,151581644	151540426,151562165,151562686,151563990,151564614,151566228,151569770,151574398,151575005,151578826,151579732,151581042,151583583	Gene ID= ENSG00000143367.15 TPM= 3.72 Transcript Type= protein_coding
chr1	151540308	151583583	151540308	151583583	+	ENST00000368848.6@TUFT1	ENST00000368848.6	protein_coding	151540308,151562585,151563904,151564525,151566163,151569657,151574270,151574911,151578721,151579649,151580942,151581644	151540426,151562686,151563990,151564614,151566228,151569770,151574398,151575005,151578826,151579732,151581042,151583583	Gene ID= ENSG00000143367.15 TPM= 3.72 Transcript Type= protein_coding
chr1	151728429	151729606	151728429	151729606	+	ENST00000427205.1@RIIAD1	ENST00000427205.1	protein_coding	151728429,151728766,151729488	151728475,151728893,151729606	Gene ID= ENSG00000178796.12 TPM= 1.06 Transcript Type= processed_transcript
chr1	151759643	151763564	151759643	151763564	-	ENST00000368830.7@MRPL9	ENST00000368830.7	protein_coding	151763327,151762990,151762376,151762105,151761451,151760816,151759643	151763564,151763146,151762500,151762155,151761552,151760899,151760181	Gene ID= ENSG00000143436.10 TPM= 43.55 Transcript Type= protein_coding
chr1	151759647	151763496	151759647	151763496	-	ENST00000467306.5@MRPL9	ENST00000467306.5	protein_coding	151763327,151762950,151762376,151762105,151761451,151760816,151759647	151763496,151763146,151762500,151762155,151761552,151760899,151760181	Gene ID= ENSG00000143436.10 TPM= 5.31 Transcript Type= nonsense_mediated_decay
chr1	151773494	151790529	151773494	151790529	-	transcript7209.chr1.nic@TDRKH	transcript7209.chr1.nic	protein_coding	151790380,151782899,151781481,151779951,151779103,151778685,151776439,151776096,151775820,151775392,151775065,151774710,151774413,151773494	151790529,151783049,151781587,151780140,151779242,151779006,151776599,151776268,151775884,151775543,151775166,151774806,151774504,151774227	Gene ID= ENSG00000182134.15 TPM= 5.31 Transcript Type= NA
chr1	151773484	151790522	151773484	151790522	-	ENST00000368824.7@TDRKH	ENST00000368824.7	protein_coding	151790380,151782899,151781481,151779951,151779103,151778685,151776439,151776096,151775820,151775392,151775065,151774710,151773484	151790522,151783049,151781587,151780140,151779242,151779006,151776599,151776268,151775884,151775543,151775166,151774806,151774504	Gene ID= ENSG00000182134.15 TPM= 2.12 Transcript Type= protein_coding
chr1	151773498	151790505	151773498	151790505	-	ENST00000458431.6@TDRKH	ENST00000458431.6	protein_coding	151790405,151782899,151781481,151779951,151779103,151778685,151776439,151776096,151775820,151775392,151775065,151774710,151773498	151790505,151783049,151781587,151780140,151779242,151779006,151776599,151776268,151775884,151775543,151775166,151774806,151774504	Gene ID= ENSG00000182134.15 TPM= 2.12 Transcript Type= protein_coding
chr1	151790842	151794402	151790842	151794402	+	ENST00000389897.3@TDRKH-AS1	ENST00000389897.3	antisense_RNA	151790842,151793815	151791245,151794402	Gene ID= ENSG00000203288.3 TPM= 1.06 Transcript Type= antisense_RNA
chr1	151806957	151831872	151806957	151831872	-	ENST00000318247.6@RORC	ENST00000318247.6	protein_coding	151831725,151829429,151817195,151816664,151814913,151814574,151813488,151813239,151812947,151811325,151806957	151831872,151829458,151817280,151816805,151815425,151814695,151813620,151813346,151813057,151811434,151807633	Gene ID= ENSG00000143365.17 TPM= 2.12 Transcript Type= protein_coding
chr1	151838304	151851541	151838304	151851541	+	transcript7220.chr1.nnic@AL450992.2	transcript7220.chr1.nnic	antisense_RNA	151838304,151839026,151841741,151844045,151850233	151838737,151839105,151842031,151844242,151851541	Gene ID= ENSG00000234614.1 TPM= 3.19 Transcript Type= NA
chr1	151874055	151909502	151874055	151909502	-	ENST00000471464.5@THEM4	ENST00000471464.5	protein_coding	151909360,151895008,151889983,151889214,151888273,151877001,151874055	151909502,151895194,151890214,151889373,151888383,151877125,151874928	Gene ID= ENSG00000159445.12 TPM= 7.44 Transcript Type= nonsense_mediated_decay
chr1	151982915	151994390	151982915	151994390	-	ENST00000368811.7@S100A10	ENST00000368811.7	protein_coding	151993752,151986099,151982915	151994390,151986251,151983324	Gene ID= ENSG00000197747.8 TPM= 109.4 Transcript Type= protein_coding
chr1	152032506	152037035	152032506	152037035	-	ENST00000271638.2@S100A11	ENST00000271638.2	protein_coding	152036913,152033648,152032506	152037035,152033800,152032823	Gene ID= ENSG00000163191.5 TPM= 105.15 Transcript Type= protein_coding
chr1	153357854	153361027	153357854	153361027	+	ENST00000368738.3@S100A9	ENST00000368738.3	protein_coding	153357854,153358269,153360644	153357881,153358433,153361027	Gene ID= ENSG00000163220.10 TPM= 12.75 Transcript Type= protein_coding
chr1	153373706	153375649	153373706	153375649	-	ENST00000368737.4@S100A12	ENST00000368737.4	protein_coding	153375552,153374455,153373706	153375649,153374612,153373967	Gene ID= ENSG00000163221.8 TPM= 4.25 Transcript Type= protein_coding
chr1	153390032	153391188	153390032	153391188	-	ENST00000368733.3@S100A8	ENST00000368733.3	protein_coding	153391041,153390395,153390032	153391188,153390557,153390243	Gene ID= ENSG00000143546.9 TPM= 18.06 Transcript Type= protein_coding
chr1	153534599	153536215	153534599	153536215	-	ENST00000496817.5@S100A6	ENST00000496817.5	protein_coding	153535949,153535202,153534599	153536215,153535375,153534830	Gene ID= ENSG00000197956.9 TPM= 14.52 Transcript Type= protein_coding
chr1	153534599	153536222	153534599	153536222	-	ENST00000368719.8@S100A6	ENST00000368719.8	protein_coding	153535949,153535202,153534599	153536222,153535360,153534830	Gene ID= ENSG00000197956.9 TPM= 458.5 Transcript Type= protein_coding
chr1	153543613	153545802	153543613	153545802	-	ENST00000354332.8@S100A4	ENST00000354332.8	protein_coding	153545753,153545470,153544654,153543613	153545802,153545518,153544809,153543923	Gene ID= ENSG00000196154.11 TPM= 3.19 Transcript Type= protein_coding
chr1	153543613	153545806	153543613	153545806	-	ENST00000468373.1@S100A4	ENST00000468373.1	protein_coding	153545753,153544654,153543613	153545806,153544809,153543939	Gene ID= ENSG00000196154.11 TPM= 3.19 Transcript Type= processed_transcript
chr1	153543613	153545885	153543613	153545885	-	ENST00000368716.8@S100A4	ENST00000368716.8	protein_coding	153545753,153544654,153543613	153545885,153544809,153543923	Gene ID= ENSG00000196154.11 TPM= 29.74 Transcript Type= protein_coding
chr1	153543613	153545097	153543613	153545097	-	ENST00000481009.1@S100A4	ENST00000481009.1	protein_coding	153544654,153543613	153545097,153543923	Gene ID= ENSG00000196154.11 TPM= 3.19 Transcript Type= processed_transcript
chr1	153543613	153545063	153543613	153545063	-	ENST00000368715.5@S100A4	ENST00000368715.5	protein_coding	153544958,153544654,153543613	153545063,153544809,153543923	Gene ID= ENSG00000196154.11 TPM= 2.12 Transcript Type= protein_coding
chr1	153547329	153549372	153547329	153549372	-	ENST00000368713.7@S100A3	ENST00000368713.7	protein_coding	153549181,153548345,153547329	153549372,153548490,153547846	Gene ID= ENSG00000188015.9 TPM= 1.06 Transcript Type= protein_coding
chr1	153547329	153550214	153547329	153550214	-	transcript7252.chr1.nnic@S100A3	transcript7252.chr1.nnic	protein_coding	153550065,153548345,153547329	153550214,153548490,153547846	Gene ID= ENSG00000188015.9 TPM= 2.12 Transcript Type= NA
chr1	153561343	153566755	153561343	153566755	-	ENST00000368709.5@S100A2	ENST00000368709.5	protein_coding	153566702,153563734,153561343	153566755,153563887,153561591	Gene ID= ENSG00000196754.10 TPM= 4.25 Transcript Type= protein_coding
chr1	153589214	153613151	153589214	153613151	-	transcript7257.chr1.nnic@S100A16	transcript7257.chr1.nnic	protein_coding	153612952,153607999,153606172,153589214	153613151,153608177,153606271,153589876	Gene ID= ENSG00000188643.10 TPM= 2.12 Transcript Type= NA
chr1	153606886	153609337	153606886	153609337	-	ENST00000368704.5@S100A16	ENST00000368704.5	protein_coding	153609178,153607999,153606886	153609337,153608177,153607692	Gene ID= ENSG00000188643.10 TPM= 5.84 Transcript Type= protein_coding
chr1	153606886	153613083	153606886	153613083	-	ENST00000368706.8@S100A16	ENST00000368706.8	protein_coding	153612952,153607999,153606886	153613083,153608177,153607692	Gene ID= ENSG00000188643.10 TPM= 64.26 Transcript Type= protein_coding
chr1	153614255	153616986	153614255	153616986	-	ENST00000368702.5@S100A14	ENST00000368702.5	protein_coding	153616853,153616295,153615829,153615235,153614255	153616986,153616355,153615936,153615381,153615022	Gene ID= ENSG00000189334.8 TPM= 4.25 Transcript Type= protein_coding
chr1	153618804	153627048	153618804	153627048	-	ENST00000392622.3@S100A13	ENST00000392622.3	protein_coding	153626951,153626320,153618804	153627048,153626533,153619038	Gene ID= ENSG00000189171.14 TPM= 8.85 Transcript Type= protein_coding
chr1	153618804	153627655	153618804	153627655	-	transcript7272.chr1.nic@S100A13	transcript7272.chr1.nic	protein_coding	153627483,153626320,153618804	153627655,153626533,153619038	Gene ID= ENSG00000189171.14 TPM= 71.52 Transcript Type= NA
chr1	153618804	153627268	153618804	153627268	-	ENST00000392623.5@S100A13	ENST00000392623.5	protein_coding	153627139,153626320,153618804	153627268,153626533,153619038	Gene ID= ENSG00000189171.14 TPM= 6.72 Transcript Type= protein_coding
chr1	153628397	153632037	153628397	153632037	+	ENST00000292169.5@S100A1	ENST00000292169.5	protein_coding	153628397,153630509,153631698	153628496,153630662,153632037	Gene ID= ENSG00000160678.11 TPM= 216.68 Transcript Type= protein_coding
chr1	153633982	153646305	153633982	153646305	+	ENST00000368690.7@CHTOP	ENST00000368690.7	protein_coding	153633982,153636572,153638295,153642243,153643227,153645064	153634343,153636653,153638448,153642429,153643364,153646305	Gene ID= ENSG00000160679.12 TPM= 32.69 Transcript Type= protein_coding
chr1	153634032	153646306	153634032	153646306	+	transcript7301.chr1.nic@CHTOP	transcript7301.chr1.nic	protein_coding	153634032,153636572,153642243,153643227,153645064	153634343,153638448,153642429,153643364,153646306	Gene ID= ENSG00000160679.12 TPM= 5.52 Transcript Type= NA
chr1	153637554	153645470	153637554	153645470	+	transcript7307.chr1.nnic@CHTOP	transcript7307.chr1.nnic	protein_coding	153637554,153638295,153642246,153643227,153645064	153637639,153638448,153642429,153643364,153645470	Gene ID= ENSG00000160679.12 TPM= 6.37 Transcript Type= NA
chr1	153634049	153646306	153634049	153646306	+	ENST00000368694.7@CHTOP	ENST00000368694.7	protein_coding	153634049,153636572,153638295,153642246,153643227,153645064	153634343,153636653,153638448,153642429,153643364,153646306	Gene ID= ENSG00000160679.12 TPM= 17.82 Transcript Type= protein_coding
chr1	153634075	153645470	153634075	153645470	+	ENST00000495554.1@CHTOP	ENST00000495554.1	protein_coding	153634075,153636572,153645064	153634343,153638448,153645470	Gene ID= ENSG00000160679.12 TPM= 1.06 Transcript Type= processed_transcript
chr1	153658654	153661830	153658654	153661830	+	ENST00000368685.5@SNAPIN	ENST00000368685.5	protein_coding	153658654,153659138,153659448,153661200	153658886,153659184,153659566,153661830	Gene ID= ENSG00000143553.10 TPM= 188 Transcript Type= protein_coding
chr1	153658714	153661829	153658714	153661829	+	ENST00000462880.1@SNAPIN	ENST00000462880.1	protein_coding	153658714,153659448,153661200	153658886,153659566,153661829	Gene ID= ENSG00000143553.10 TPM= 18.06 Transcript Type= processed_transcript
chr1	153662036	153671048	153662036	153671048	-	ENST00000361891.8@ILF2	ENST00000361891.8	protein_coding	153670918,153670171,153669836,153668453,153668000,153667555,153665663,153665220,153664396,153664043,153663215,153663019,153662705,153662036	153671048,153670230,153669878,153668557,153668077,153667657,153665728,153665336,153664474,153664130,153663276,153663133,153662795,153662556	Gene ID= ENSG00000143621.16 TPM= 112.59 Transcript Type= protein_coding
chr1	153661788	153671028	153661788	153671028	-	ENST00000615950.4@ILF2	ENST00000615950.4	protein_coding	153670918,153670171,153669836,153668453,153668000,153667555,153665663,153665220,153664396,153664043,153663215,153663019,153662705,153661788	153671028,153670230,153669878,153668576,153668077,153667657,153665728,153665336,153664474,153664130,153663276,153663133,153662795,153662556	Gene ID= ENSG00000143621.16 TPM= 2.12 Transcript Type= protein_coding
chr1	153678637	153693992	153678637	153693992	+	ENST00000368680.3@NPR1	ENST00000368680.3	protein_coding	153678637,153680501,153681180,153681704,153682498,153683376,153683740,153684964,153685806,153686123,153686646,153687016,153687200,153687634,153688053,153688953,153689188,153689453,153689806,153690284,153693106,153693352	153679829,153680700,153681293,153681839,153682589,153683511,153683824,153685084,153685880,153686200,153686750,153687087,153687356,153687789,153688221,153689099,153689311,153689521,153689980,153690382,153693197,153693992	Gene ID= ENSG00000169418.9 TPM= 23.9 Transcript Type= protein_coding
chr1	153678783	153693992	153678783	153693992	+	transcript7317.chr1.nnic@NPR1	transcript7317.chr1.nnic	protein_coding	153678783,153680501,153681180,153681704,153682498,153683376,153683740,153684964,153685806,153686123,153686646,153687016,153687200,153687634,153688953,153689188,153689453,153689806,153690284,153693106,153693352	153679829,153680700,153681293,153681839,153682589,153683511,153683824,153685084,153685880,153686200,153686750,153687087,153687356,153687789,153689099,153689311,153689521,153689980,153690382,153693197,153693992	Gene ID= ENSG00000169418.9 TPM= 7.97 Transcript Type= NA
chr1	153688320	153691296	153688320	153691296	+	transcript7319.chr1.nic@NPR1	transcript7319.chr1.nic	protein_coding	153688320,153689188,153689453,153689806,153690284	153689099,153689311,153689521,153689980,153691296	Gene ID= ENSG00000169418.9 TPM= 3.19 Transcript Type= NA
chr1	153774354	153780157	153774354	153780157	+	ENST00000271857.6@SLC27A3	ENST00000271857.6	protein_coding	153774354,153776518,153777062,153777761,153778161,153778463,153778687,153779114,153779343,153779826	153776164,153776727,153777220,153777885,153778355,153778553,153778885,153779211,153779473,153780157	Gene ID= ENSG00000143554.13 TPM= 11.68 Transcript Type= protein_coding
chr1	153775310	153780157	153775310	153780157	+	transcript7329.chr1.nic@SLC27A3	transcript7329.chr1.nic	protein_coding	153775310,153776518,153777062,153777761,153778161,153778463,153778687,153779114,153779343,153779931	153776164,153776727,153777220,153777885,153778355,153778553,153778885,153779211,153779473,153780157	Gene ID= ENSG00000143554.13 TPM= 3.19 Transcript Type= NA
chr1	153808852	153815110	153808852	153815110	-	transcript7336.chr1.nnic@GATAD2B	transcript7336.chr1.nnic	protein_coding	153813250,153812022,153811731,153808852	153815110,153812134,153811850,153810310	Gene ID= ENSG00000143614.9 TPM= 52.05 Transcript Type= NA
chr1	153806102	153806452	153806102	153806452	-	transcript7341.chr1.nnic@NA	transcript7341.chr1.nnic	NA	153806102	153806452	Gene ID= novel_gene_chr1_7342 TPM= 20.18 Transcript Type= NA
chr1	153893336	153896011	153893336	153896011	+	transcript7339.chr1.nnic@NA	transcript7339.chr1.nnic	NA	153893336	153896011	Gene ID= novel_gene_chr1_7340 TPM= 7.44 Transcript Type= NA
chr1	153929501	153946696	153929501	153946696	-	ENST00000361217.8@DENND4B	ENST00000361217.8	protein_coding	153946301,153944058,153942878,153942556,153942187,153941869,153941374,153941231,153940904,153940431,153940156,153939589,153938900,153937724,153937488,153936542,153936060,153934760,153934135,153933483,153933197,153932861,153932642,153932204,153930947,153930692,153930539,153929501	153946696,153944397,153943130,153942625,153942356,153942113,153941440,153941289,153941048,153940606,153940256,153939804,153939045,153937863,153937614,153936748,153936188,153934964,153934302,153933871,153933319,153933030,153932777,153932440,153931064,153930857,153930603,153930442	Gene ID= ENSG00000198837.9 TPM= 56.29 Transcript Type= protein_coding
chr1	153947675	153958625	153947675	153958625	-	ENST00000368633.1@CRTC2	ENST00000368633.1	protein_coding	153958345,153955065,153954873,153954255,153953538,153953266,153952805,153952571,153952397,153952018,153951260,153949115,153948458,153947675	153958625,153955166,153954989,153954316,153953606,153953369,153952834,153952635,153952446,153952262,153951666,153949384,153948644,153948329	Gene ID= ENSG00000160741.16 TPM= 26.55 Transcript Type= protein_coding
chr1	153959099	153963572	153959099	153963572	-	ENST00000356205.8@SLC39A1	ENST00000356205.8	protein_coding	153963495,153962529,153962220,153959099	153963572,153962747,153962350,153960754	Gene ID= ENSG00000143570.17 TPM= 73.29 Transcript Type= protein_coding
chr1	153959110	153963475	153959110	153963475	-	ENST00000368623.7@SLC39A1	ENST00000368623.7	protein_coding	153962529,153962220,153959110	153963475,153962350,153960754	Gene ID= ENSG00000143570.17 TPM= 6.37 Transcript Type= protein_coding
chr1	153963738	153965067	153963738	153965067	+	transcript7353.chr1.nnic@NA	transcript7353.chr1.nnic	NA	153963738	153965067	Gene ID= novel_gene_chr1_7354 TPM= 2.12 Transcript Type= NA
chr1	153967487	153974356	153967487	153974356	+	transcript7356.chr1.nic@CREB3L4	transcript7356.chr1.nic	protein_coding	153967487,153968522,153968930,153969334,153972744,153972972,153973195,153973380,153973620,153973872	153967884,153968699,153969176,153969455,153972836,153973078,153973263,153973464,153973716,153974356	Gene ID= ENSG00000143578.15 TPM= 2.12 Transcript Type= NA
chr1	153967903	153974363	153967903	153974363	+	ENST00000368607.7@CREB3L4	ENST00000368607.7	protein_coding	153967903,153968522,153968930,153969334,153972744,153972972,153973195,153973380,153973620,153973872	153968164,153968699,153969176,153969455,153972836,153973078,153973263,153973464,153973716,153974363	Gene ID= ENSG00000143578.15 TPM= 2.12 Transcript Type= protein_coding
chr1	153974512	153977679	153974512	153977679	-	transcript7368.chr1.nic@JTB	transcript7368.chr1.nic	protein_coding	153977544,153977170,153976976,153976693,153975826,153974512	153977679,153977389,153977013,153976775,153975905,153974835	Gene ID= ENSG00000143543.14 TPM= 7.44 Transcript Type= NA
chr1	153974269	153977688	153974269	153977688	-	ENST00000271843.8@JTB	ENST00000271843.8	protein_coding	153977170,153976976,153976693,153975826,153974269	153977688,153977013,153976775,153975905,153974835	Gene ID= ENSG00000143543.14 TPM= 8.5 Transcript Type= protein_coding
chr1	153974512	153977660	153974512	153977660	-	ENST00000368589.5@JTB	ENST00000368589.5	protein_coding	153977170,153976693,153975826,153974512	153977660,153977013,153975905,153974835	Gene ID= ENSG00000143543.14 TPM= 6.37 Transcript Type= protein_coding
chr1	153977743	153979160	153977743	153979160	+	ENST00000608236.1@AL358472.2	ENST00000608236.1	lincRNA	153977743	153979160	Gene ID= ENSG00000272654.1 TPM= 1.06 Transcript Type= lincRNA
chr1	153981651	153986352	153981651	153986352	-	ENST00000368575.3@RAB13	ENST00000368575.3	protein_coding	153986113,153984721,153983521,153983219,153982719,153982535,153982391,153981651	153986352,153984781,153983581,153983296,153982808,153982600,153982444,153982176	Gene ID= ENSG00000143545.8 TPM= 40.36 Transcript Type= protein_coding
chr1	153990763	153992150	153990763	153992150	+	ENST00000477151.1@RPS27	ENST00000477151.1	protein_coding	153990763,153990914,153991115,153991566,153992065	153990802,153991034,153991223,153991676,153992150	Gene ID= ENSG00000177954.11 TPM= 4.25 Transcript Type= processed_transcript
chr1	153990759	153992150	153990759	153992150	+	ENST00000368567.4@RPS27	ENST00000368567.4	protein_coding	153990759,153991115,153991566,153992065	153990802,153991223,153991676,153992150	Gene ID= ENSG00000177954.11 TPM= 264.48 Transcript Type= protein_coding
chr1	153990763	153992145	153990763	153992145	+	ENST00000493224.5@RPS27	ENST00000493224.5	protein_coding	153990763,153991115,153991566,153992065	153991034,153991223,153991676,153992145	Gene ID= ENSG00000177954.11 TPM= 4.25 Transcript Type= processed_transcript
chr1	154167465	154192211	154167465	154192211	-	ENST00000368530.6@TPM3	ENST00000368530.6	protein_coding	154191902,154191186,154176115,154173084,154172908,154171413,154170649,154170400,154169305,154167465	154192211,154191311,154176248,154173201,154172978,154171488,154170711,154170469,154169383,154167940	Gene ID= ENSG00000143549.19 TPM= 24.7 Transcript Type= protein_coding
chr1	154156364	154183233	154156364	154183233	-	transcript7386.chr1.nic@TPM3	transcript7386.chr1.nic	protein_coding	154182988,154176115,154173084,154172908,154171413,154170649,154170400,154169305,154156364	154183233,154176248,154173201,154172978,154171488,154170711,154170469,154169383,154157721	Gene ID= ENSG00000143549.19 TPM= 9.67 Transcript Type= NA
chr1	154155304	154183249	154155304	154183249	-	ENST00000611659.4@TPM3	ENST00000611659.4	protein_coding	154182988,154176115,154173084,154172908,154172029,154170400,154155304	154183249,154176248,154173201,154172978,154172104,154170469,154157721	Gene ID= ENSG00000143549.19 TPM= 2.76 Transcript Type= protein_coding
chr1	154156364	154183205	154156364	154183205	-	ENST00000330188.13@TPM3	ENST00000330188.13	protein_coding	154182988,154176115,154173084,154172908,154171413,154170649,154170400,154156364	154183205,154176248,154173201,154172978,154171488,154170711,154170469,154157721	Gene ID= ENSG00000143549.19 TPM= 8.6 Transcript Type= protein_coding
chr1	154175843	154175962	154175843	154175962	-	transcript7411.chr1.nnic@NA	transcript7411.chr1.nnic	NA	154175843	154175962	Gene ID= novel_gene_chr1_7412 TPM= 2.12 Transcript Type= NA
chr1	154206706	154220606	154206706	154220606	-	ENST00000368521.9@C1orf43	ENST00000368521.9	protein_coding	154220342,154219836,154214457,154213893,154212458,154212320,154206706	154220606,154219937,154214574,154213946,154212624,154212378,154207648	Gene ID= ENSG00000143612.19 TPM= 204.01 Transcript Type= protein_coding
chr1	154206720	154220624	154206720	154220624	-	ENST00000350592.7@C1orf43	ENST00000350592.7	protein_coding	154220342,154214457,154213893,154212458,154212320,154206720	154220624,154214574,154213946,154212624,154212378,154207648	Gene ID= ENSG00000143612.19 TPM= 33.53 Transcript Type= protein_coding
chr1	154206720	154220619	154206720	154220619	-	ENST00000362076.8@C1orf43	ENST00000362076.8	protein_coding	154220342,154214457,154212458,154212320,154206720	154220619,154214574,154212624,154212378,154207648	Gene ID= ENSG00000143612.19 TPM= 7.33 Transcript Type= protein_coding
chr1	154211734	154220533	154211734	154220533	-	ENST00000368518.5@C1orf43	ENST00000368518.5	protein_coding	154220342,154219836,154214457,154213893,154212458,154211734	154220533,154219937,154214574,154213946,154212624,154212378	Gene ID= ENSG00000143612.19 TPM= 1.06 Transcript Type= protein_coding
chr1	154220935	154270847	154220935	154270847	+	transcript7415.chr1.nic@UBAP2L	transcript7415.chr1.nic	protein_coding	154220935,154225084,154227282,154228615,154234591,154235196,154236566,154237024,154241513,154243217,154246204,154249239,154251041,154251481,154253900,154254836,154255152,154255683,154257063,154257346,154258977,154259948,154260892,154261592,154266501,154268757,154269362,154270200	154220975,154225213,154227359,154228725,154234759,154235291,154236611,154237136,154241565,154243302,154246375,154249437,154251318,154251653,154254089,154254890,154255326,154255755,154257258,154257434,154259030,154260029,154261109,154261697,154266568,154268954,154269412,154270847	Gene ID= ENSG00000143569.18 TPM= 6.02 Transcript Type= NA
chr1	154220946	154270847	154220946	154270847	+	transcript7419.chr1.nic@UBAP2L	transcript7419.chr1.nic	protein_coding	154220946,154225084,154227282,154228615,154234591,154235196,154236566,154237024,154241513,154243217,154246204,154249239,154251041,154251481,154253900,154254836,154255152,154255683,154257063,154257346,154258977,154259948,154260892,154261592,154266501,154268757,154269362,154270200	154221040,154225213,154227359,154228725,154234759,154235291,154236611,154237136,154241565,154243302,154246375,154249437,154251318,154251653,154254089,154254890,154255326,154255755,154257258,154257434,154259030,154260029,154261109,154261697,154266568,154268954,154269412,154270847	Gene ID= ENSG00000143569.18 TPM= 6.02 Transcript Type= NA
chr1	154220849	154270852	154220849	154270852	+	ENST00000428931.5@UBAP2L	ENST00000428931.5	protein_coding	154220849,154225084,154227282,154228615,154234591,154235196,154236566,154237024,154241513,154243217,154246204,154249239,154251041,154251481,154253900,154254836,154255152,154255683,154257063,154257346,154258977,154259948,154260892,154261592,154266501,154268757,154270200	154220975,154225213,154227359,154228725,154234759,154235291,154236611,154237136,154241565,154243302,154246375,154249437,154251318,154251653,154254089,154254890,154255326,154255755,154257258,154257434,154259030,154260029,154261109,154261697,154266568,154268954,154270852	Gene ID= ENSG00000143569.18 TPM= 11.86 Transcript Type= protein_coding
chr1	154220849	154263505	154220849	154263505	+	ENST00000613315.4@UBAP2L	ENST00000613315.4	protein_coding	154220849,154225084,154227282,154228615,154234591,154235196,154236566,154237024,154241513,154243217,154246204,154249239,154251041,154251481,154253900,154254836,154255152,154255683,154257063,154257346,154258977,154259948,154260892,154261592,154263103	154220975,154225213,154227359,154228725,154234738,154235291,154236611,154237136,154241565,154243302,154246375,154249437,154251318,154251653,154254089,154254890,154255326,154255755,154257258,154257434,154259030,154260029,154261109,154261697,154263505	Gene ID= ENSG00000143569.18 TPM= 17.35 Transcript Type= protein_coding
chr1	154220946	154263505	154220946	154263505	+	transcript7429.chr1.nic@UBAP2L	transcript7429.chr1.nic	protein_coding	154220946,154225084,154227282,154228615,154234591,154235196,154236566,154237024,154241513,154243217,154246204,154249239,154251041,154251481,154253900,154254836,154255152,154255683,154257063,154257346,154258977,154259948,154260892,154261592,154263103	154221040,154225213,154227359,154228725,154234759,154235291,154236611,154237136,154241565,154243302,154246375,154249437,154251318,154251653,154254089,154254890,154255326,154255755,154257258,154257434,154259030,154260029,154261109,154261697,154263505	Gene ID= ENSG00000143569.18 TPM= 20 Transcript Type= NA
chr1	154221304	154263505	154221304	154263505	+	transcript7430.chr1.nic@UBAP2L	transcript7430.chr1.nic	protein_coding	154221304,154225084,154227282,154228615,154234591,154235196,154236566,154237024,154241513,154243217,154246204,154249239,154251041,154251481,154253900,154254836,154255152,154255683,154257063,154257346,154258977,154259948,154260892,154261592,154263103	154221396,154225213,154227359,154228725,154234759,154235291,154236611,154237136,154241565,154243302,154246375,154249437,154251318,154251653,154254089,154254890,154255326,154255755,154257258,154257434,154259030,154260029,154261109,154261697,154263505	Gene ID= ENSG00000143569.18 TPM= 8.85 Transcript Type= NA
chr1	154272511	154275875	154272511	154275875	+	ENST00000328703.11@HAX1	ENST00000328703.11	protein_coding	154272511,154273336,154273774,154274950,154275154,154275393,154275616	154272776,154273598,154273961,154275001,154275260,154275483,154275875	Gene ID= ENSG00000143575.14 TPM= 174.01 Transcript Type= protein_coding
chr1	154272609	154275873	154272609	154275873	+	ENST00000483970.6@HAX1	ENST00000483970.6	protein_coding	154272609,154273336,154273750,154274950,154275154,154275393,154275616	154272776,154273598,154273961,154275001,154275260,154275483,154275873	Gene ID= ENSG00000143575.14 TPM= 6.72 Transcript Type= protein_coding
chr1	154272629	154275875	154272629	154275875	+	ENST00000531435.5@HAX1	ENST00000531435.5	protein_coding	154272629,154273336,154274950,154275154,154275393,154275616	154272776,154273961,154275001,154275260,154275483,154275875	Gene ID= ENSG00000143575.14 TPM= 7.25 Transcript Type= retained_intron
chr1	154405193	154469450	154405193	154469450	+	ENST00000368485.7@IL6R	ENST00000368485.7	protein_coding	154405193,154429196,154430483,154434519,154434990,154435969,154448125,154449911,154454488,154465134	154405714,154429444,154430606,154434700,154435156,154436110,154448171,154449980,154454581,154469450	Gene ID= ENSG00000160712.12 TPM= 2.12 Transcript Type= protein_coding
chr1	154469637	154502092	154469637	154502092	-	transcript7465.chr1.nic@SHE	transcript7465.chr1.nic	protein_coding	154501436,154499112,154489051,154486527,154485943,154469637	154502092,154499238,154489356,154486683,154486062,154470362	Gene ID= ENSG00000169291.9 TPM= 6.37 Transcript Type= NA
chr1	154482011	154502445	154482011	154502445	-	transcript7472.chr1.nic@SHE	transcript7472.chr1.nic	protein_coding	154501436,154499112,154489051,154486527,154482011	154502445,154499238,154489356,154486683,154486062	Gene ID= ENSG00000169291.9 TPM= 4.25 Transcript Type= NA
chr1	154469778	154473619	154469778	154473619	-	transcript7474.chr1.nnic@NA	transcript7474.chr1.nnic	NA	154469778	154473619	Gene ID= novel_gene_chr1_7475 TPM= 2.12 Transcript Type= NA
chr1	154548577	154558633	154548577	154558633	-	ENST00000292211.4@UBE2Q1	ENST00000292211.4	protein_coding	154558227,154555860,154555428,154554735,154553032,154552736,154552404,154552093,154551921,154551771,154551397,154550938,154548577	154558633,154555964,154555532,154554785,154553172,154552820,154552464,154552183,154551979,154551819,154551492,154551004,154550469	Gene ID= ENSG00000160714.9 TPM= 8.5 Transcript Type= protein_coding
chr1	154582062	154608206	154582062	154608206	-	ENST00000368474.8@ADAR	ENST00000368474.8	protein_coding	154607992,154601041,154598402,154597828,154597123,154596805,154590184,154589757,154589369,154588551,154588125,154586181,154585753,154585217,154582062	154608206,154602626,154598585,154597976,154597267,154596995,154590409,154589928,154589462,154588673,154588258,154586363,154585865,154585344,154585043	Gene ID= ENSG00000160710.15 TPM= 16.46 Transcript Type= protein_coding
chr1	154582067	154627964	154582067	154627964	-	ENST00000368471.7@ADAR	ENST00000368471.7	protein_coding	154627855,154601041,154598402,154597828,154597123,154596805,154590184,154589757,154589369,154588551,154588125,154586181,154585753,154585217,154582067	154627964,154602626,154598585,154597976,154597267,154596995,154590409,154589928,154589462,154588673,154588258,154586363,154585865,154585344,154585043	Gene ID= ENSG00000160710.15 TPM= 17.53 Transcript Type= protein_coding
chr1	154600480	154627968	154600480	154627968	-	transcript7488.chr1.nic@ADAR	transcript7488.chr1.nic	protein_coding	154627855,154600480	154627968,154602626	Gene ID= ENSG00000160710.15 TPM= 3.19 Transcript Type= NA
chr1	154697455	154870280	154697455	154870280	-	ENST00000271915.8@KCNN3	ENST00000271915.8	protein_coding	154869032,154822089,154771975,154733003,154725916,154714876,154713464,154697455	154870280,154822184,154772393,154733144,154726026,154715003,154713533,154708272	Gene ID= ENSG00000143603.18 TPM= 5.31 Transcript Type= protein_coding
chr1	154924734	154936991	154924734	154936991	-	ENST00000368467.3@PMVK	ENST00000368467.3	protein_coding	154936591,154932352,154929024,154926354,154924734	154936991,154932415,154929176,154926483,154925265	Gene ID= ENSG00000163344.5 TPM= 98.78 Transcript Type= protein_coding
chr1	154944080	154956138	154944080	154956138	-	transcript7494.chr1.nnic@PBXIP1	transcript7494.chr1.nnic	protein_coding	154956069,154951795,154951471,154951232,154948133,154947982,154947642,154947417,154945572,154944080	154956138,154951921,154951535,154951397,154948366,154948005,154947712,154947548,154946803,154945117	Gene ID= ENSG00000163346.16 TPM= 8.5 Transcript Type= NA
chr1	154944080	154956104	154944080	154956104	-	ENST00000368463.7@PBXIP1	ENST00000368463.7	protein_coding	154956069,154953671,154951795,154951471,154951232,154948133,154947982,154947642,154947417,154945572,154944080	154956104,154953757,154951921,154951535,154951397,154948366,154948005,154947712,154947548,154946803,154945117	Gene ID= ENSG00000163346.16 TPM= 47.8 Transcript Type= protein_coding
chr1	154944076	154956121	154944076	154956121	-	ENST00000368465.5@PBXIP1	ENST00000368465.5	protein_coding	154956069,154951795,154951471,154951232,154948133,154947982,154947642,154947417,154945572,154944076	154956121,154951919,154951535,154951397,154948366,154948005,154947712,154947548,154946803,154945117	Gene ID= ENSG00000163346.16 TPM= 8.5 Transcript Type= protein_coding
chr1	154957026	154961781	154957026	154961781	-	transcript7522.chr1.nnic@PYGO2	transcript7522.chr1.nnic	protein_coding	154961474,154960977,154957026	154961781,154961112,154959846	Gene ID= ENSG00000163348.3 TPM= 3.19 Transcript Type= NA
chr1	154957026	154961748	154957026	154961748	-	ENST00000368457.2@PYGO2	ENST00000368457.2	protein_coding	154961474,154960977,154957026	154961748,154961026,154959846	Gene ID= ENSG00000163348.3 TPM= 33.99 Transcript Type= protein_coding
chr1	154961825	154962623	154961825	154962623	+	ENST00000605085.1@AL451085.2	ENST00000605085.1	antisense_RNA	154961825	154962623	Gene ID= ENSG00000271380.1 TPM= 2.12 Transcript Type= antisense_RNA
chr1	154962298	154974405	154962298	154974405	-	transcript7498.chr1.nic@SHC1	transcript7498.chr1.nic	protein_coding	154974248,154973293,154970032,154969378,154968771,154968495,154968204,154967980,154967671,154966319,154966162,154965946,154965543,154962298	154974405,154973508,154970199,154969448,154968834,154968614,154968257,154968031,154967797,154966517,154966231,154966080,154965781,154963931	Gene ID= ENSG00000160691.18 TPM= 8.92 Transcript Type= NA
chr1	154962298	154974406	154962298	154974406	-	transcript7502.chr1.nic@SHC1	transcript7502.chr1.nic	protein_coding	154974248,154970032,154969378,154968771,154968495,154968204,154967980,154967671,154966319,154966162,154965946,154965639,154962298	154974406,154970199,154969448,154968834,154968614,154968257,154968031,154967797,154966517,154966231,154966077,154965781,154963931	Gene ID= ENSG00000160691.18 TPM= 5.49 Transcript Type= NA
chr1	154962298	154974406	154962298	154974406	-	transcript7507.chr1.nic@SHC1	transcript7507.chr1.nic	protein_coding	154974248,154970032,154969378,154968771,154968495,154967980,154967671,154966319,154966162,154965946,154965543,154962298	154974406,154970199,154969448,154968834,154968614,154968031,154967797,154966517,154966231,154966080,154965781,154963931	Gene ID= ENSG00000160691.18 TPM= 7.33 Transcript Type= NA
chr1	154962298	154970741	154962298	154970741	-	ENST00000368445.9@SHC1	ENST00000368445.9	protein_coding	154970032,154969378,154968771,154968495,154968204,154967980,154967671,154966319,154966162,154965946,154965543,154962298	154970741,154969448,154968834,154968614,154968257,154968031,154967797,154966517,154966231,154966077,154965781,154963931	Gene ID= ENSG00000160691.18 TPM= 6.45 Transcript Type= protein_coding
chr1	154962298	154974376	154962298	154974376	-	ENST00000368453.8@SHC1	ENST00000368453.8	protein_coding	154974248,154970032,154969378,154968771,154968495,154968204,154967980,154967671,154966319,154966162,154965946,154965543,154962298	154974376,154970199,154969448,154968834,154968614,154968257,154968031,154967797,154966517,154966231,154966080,154965781,154963931	Gene ID= ENSG00000160691.18 TPM= 19.54 Transcript Type= protein_coding
chr1	154962298	154974376	154962298	154974376	-	ENST00000368450.5@SHC1	ENST00000368450.5	protein_coding	154974248,154970032,154969378,154968771,154968495,154968204,154967980,154967671,154966319,154966162,154965946,154965543,154962298	154974376,154970199,154969448,154968834,154968614,154968257,154968031,154967797,154966517,154966231,154966077,154965781,154963931	Gene ID= ENSG00000160691.18 TPM= 6.45 Transcript Type= protein_coding
chr1	154974653	154979248	154974653	154979248	+	ENST00000368439.5@CKS1B	ENST00000368439.5	protein_coding	154974653,154977987,154978725	154974912,154978114,154979248	Gene ID= ENSG00000173207.12 TPM= 8.5 Transcript Type= protein_coding
chr1	154974699	154979249	154974699	154979249	+	ENST00000308987.5@CKS1B	ENST00000308987.5	protein_coding	154974699,154977987,154978725	154974804,154978114,154979249	Gene ID= ENSG00000173207.12 TPM= 19.12 Transcript Type= protein_coding
chr1	154983330	154993111	154983330	154993111	+	transcript7530.chr1.nic@FLAD1	transcript7530.chr1.nic	protein_coding	154983330,154983842,154988105,154989560,154990159,154992713,154992902	154983397,154984066,154988849,154989707,154990528,154992786,154993111	Gene ID= ENSG00000160688.18 TPM= 3.19 Transcript Type= NA
chr1	154983330	154989010	154983330	154989010	+	transcript7535.chr1.nic@FLAD1	transcript7535.chr1.nic	protein_coding	154983330,154983842,154988105	154983397,154984066,154989010	Gene ID= ENSG00000160688.18 TPM= 7.97 Transcript Type= NA
chr1	154983344	154989010	154983344	154989010	+	transcript7536.chr1.nic@FLAD1	transcript7536.chr1.nic	protein_coding	154983344,154988105	154984066,154989010	Gene ID= ENSG00000160688.18 TPM= 2.66 Transcript Type= NA
chr1	154983359	154993111	154983359	154993111	+	ENST00000315144.14@FLAD1	ENST00000315144.14	protein_coding	154983359,154983842,154988105,154989560,154990159,154990339,154992713,154992902	154983397,154984066,154988849,154989707,154990257,154990528,154992786,154993111	Gene ID= ENSG00000160688.18 TPM= 20.18 Transcript Type= protein_coding
chr1	154983373	154993111	154983373	154993111	+	ENST00000292180.7@FLAD1	ENST00000292180.7	protein_coding	154983373,154988105,154989560,154990159,154990339,154992713,154992902	154984066,154988849,154989707,154990257,154990528,154992786,154993111	Gene ID= ENSG00000160688.18 TPM= 4.25 Transcript Type= protein_coding
chr1	155002630	155018522	155002630	155018522	+	ENST00000535420.5@ZBTB7B	ENST00000535420.5	protein_coding	155002630,155014655,155016220	155002943,155015814,155018522	Gene ID= ENSG00000160685.13 TPM= 32.93 Transcript Type= protein_coding
chr1	155051263	155062775	155051263	155062775	+	transcript7542.chr1.nic@ADAM15	transcript7542.chr1.nic	protein_coding	155051263,155052671,155053417,155053910,155054150,155054314,155055790,155055932,155056080,155056386,155056953,155057188,155057637,155057851,155058246,155058710,155059902,155060205,155060763,155061418,155062245,155062460	155051465,155052777,155053493,155053988,155054226,155054506,155055852,155056000,155056249,155056470,155057101,155057362,155057729,155058155,155058441,155058787,155059974,155060343,155060832,155061489,155062369,155062775	Gene ID= ENSG00000143537.13 TPM= 5.06 Transcript Type= NA
chr1	155051263	155062775	155051263	155062775	+	transcript7546.chr1.nic@ADAM15	transcript7546.chr1.nic	protein_coding	155051263,155052671,155053417,155053910,155054150,155054314,155055790,155055932,155056080,155056386,155056953,155057188,155057637,155057851,155058246,155058710,155059902,155060205,155060763,155061415,155062460	155051465,155052777,155053493,155053988,155054226,155054506,155055852,155056000,155056249,155056470,155057101,155057362,155057729,155058155,155058441,155058787,155059974,155060343,155060832,155062369,155062775	Gene ID= ENSG00000143537.13 TPM= 6.12 Transcript Type= NA
chr1	155051308	155062775	155051308	155062775	+	transcript7549.chr1.nic@ADAM15	transcript7549.chr1.nic	protein_coding	155051308,155052620,155053417,155053910,155054150,155054314,155055790,155055932,155056080,155056386,155056953,155057188,155057637,155057851,155058246,155058710,155059902,155060205,155060763,155062245,155062460	155051465,155052777,155053493,155053988,155054226,155054506,155055852,155056000,155056249,155056470,155057101,155057362,155057729,155058155,155058441,155058787,155059974,155060343,155060832,155062369,155062775	Gene ID= ENSG00000143537.13 TPM= 5.24 Transcript Type= NA
chr1	155051263	155054886	155051263	155054886	+	transcript7556.chr1.nic@ADAM15	transcript7556.chr1.nic	protein_coding	155051263,155052671,155053417,155053910,155054150,155054314	155051465,155052777,155053493,155053988,155054226,155054886	Gene ID= ENSG00000143537.13 TPM= 2.12 Transcript Type= NA
chr1	155051286	155062758	155051286	155062758	+	ENST00000355956.6@ADAM15	ENST00000355956.6	protein_coding	155051286,155052671,155053417,155053910,155054150,155054314,155055790,155055932,155056080,155056386,155056953,155057188,155057637,155057851,155058246,155058710,155059902,155060205,155060763,155061415,155062245,155062460	155051465,155052777,155053493,155053988,155054226,155054506,155055852,155056000,155056249,155056470,155057101,155057362,155057729,155058155,155058441,155058787,155059974,155060343,155060832,155061489,155062369,155062758	Gene ID= ENSG00000143537.13 TPM= 6.12 Transcript Type= protein_coding
chr1	155051306	155062775	155051306	155062775	+	ENST00000271836.10@ADAM15	ENST00000271836.10	protein_coding	155051306,155052671,155053417,155053910,155054150,155054314,155055790,155055932,155056080,155056386,155056953,155057188,155057637,155057851,155058246,155058710,155059902,155060205,155060763,155062245,155062460	155051465,155052777,155053493,155053988,155054226,155054506,155055852,155056000,155056249,155056470,155057101,155057362,155057729,155058155,155058441,155058787,155059974,155060343,155060832,155062369,155062775	Gene ID= ENSG00000143537.13 TPM= 38.51 Transcript Type= protein_coding
chr1	155051286	155062758	155051286	155062758	+	ENST00000529473.5@ADAM15	ENST00000529473.5	protein_coding	155051286,155052671,155053417,155053910,155054150,155054314,155055790,155055932,155056080,155056386,155056953,155057188,155057637,155057851,155058246,155058710,155059902,155060205,155060763,155061904,155062245,155062460	155051465,155052777,155053493,155053988,155054226,155054506,155055852,155056000,155056249,155056470,155057101,155057362,155057729,155058155,155058441,155058787,155059974,155060343,155060832,155062117,155062369,155062758	Gene ID= ENSG00000143537.13 TPM= 1.87 Transcript Type= nonsense_mediated_decay
chr1	155051286	155062758	155051286	155062758	+	ENST00000359280.8@ADAM15	ENST00000359280.8	protein_coding	155051286,155052671,155053417,155053910,155054150,155054314,155055790,155055932,155056080,155056386,155056953,155057188,155057637,155057851,155058246,155058710,155059902,155060205,155060763,155061904,155062245,155062460	155051465,155052777,155053493,155053988,155054226,155054506,155055852,155056000,155056249,155056470,155057101,155057362,155057729,155058155,155058441,155058787,155059974,155060343,155060832,155061975,155062369,155062758	Gene ID= ENSG00000143537.13 TPM= 2.93 Transcript Type= protein_coding
chr1	155127460	155134857	155127460	155134857	+	ENST00000368407.7@EFNA1	ENST00000368407.7	protein_coding	155127460,155131339,155133503,155133730,155133955	155128069,155131634,155133568,155133780,155134857	Gene ID= ENSG00000169242.11 TPM= 44.61 Transcript Type= protein_coding
chr1	155127876	155134857	155127876	155134857	+	ENST00000368406.2@EFNA1	ENST00000368406.2	protein_coding	155127876,155131339,155133730,155133955	155128069,155131634,155133780,155134857	Gene ID= ENSG00000169242.11 TPM= 9.56 Transcript Type= protein_coding
chr1	155135850	155138853	155135850	155138853	+	ENST00000368404.8@SLC50A1	ENST00000368404.8	protein_coding	155135850,155136299,155136828,155137561,155137979,155138180	155135991,155136376,155136951,155137722,155138098,155138853	Gene ID= ENSG00000169241.17 TPM= 7.44 Transcript Type= protein_coding
chr1	155135858	155138851	155135858	155138851	+	ENST00000368401.5@SLC50A1	ENST00000368401.5	protein_coding	155135858,155136299,155137561,155137979,155138180	155135991,155136376,155137722,155138098,155138851	Gene ID= ENSG00000169241.17 TPM= 2.12 Transcript Type= protein_coding
chr1	155139891	155140544	155139891	155140544	-	ENST00000368400.4@DPM3	ENST00000368400.4	protein_coding	155140491,155139891	155140544,155140245	Gene ID= ENSG00000179085.7 TPM= 26.02 Transcript Type= protein_coding
chr1	155139891	155140595	155139891	155140595	-	ENST00000341298.3@DPM3	ENST00000341298.3	protein_coding	155140491,155139891	155140595,155140271	Gene ID= ENSG00000179085.7 TPM= 14.34 Transcript Type= protein_coding
chr1	155169408	155173333	155169408	155173333	-	ENST00000295682.4@KRTCAP2	ENST00000295682.4	protein_coding	155173221,155172738,155172565,155169791,155169408	155173333,155172892,155172628,155169857,155169560	Gene ID= ENSG00000163463.11 TPM= 117.37 Transcript Type= protein_coding
chr1	155169409	155173268	155169409	155173268	-	ENST00000482246.5@KRTCAP2	ENST00000482246.5	protein_coding	155173221,155172738,155169409	155173268,155172892,155169619	Gene ID= ENSG00000163463.11 TPM= 1.59 Transcript Type= processed_transcript
chr1	155169408	155173238	155169408	155173238	-	ENST00000487350.5@KRTCAP2	ENST00000487350.5	protein_coding	155172738,155172565,155169791,155169408	155173238,155172628,155169857,155169560	Gene ID= ENSG00000163463.11 TPM= 48.86 Transcript Type= processed_transcript
chr1	155169677	155171867	155169677	155171867	+	transcript7584.chr1.nnic@NA	transcript7584.chr1.nnic	NA	155169677	155171867	Gene ID= novel_gene_chr1_7585 TPM= 13.81 Transcript Type= NA
chr1	155195588	155207897	155195588	155207897	-	ENST00000368378.7@THBS3	ENST00000368378.7	protein_coding	155207798,155206200,155205060,155204855,155203513,155203223,155203086,155202812,155202261,155201957,155201417,155201094,155200897,155200451,155199995,155199804,155198409,155198042,155197880,155197463,155197041,155195987,155195588	155207897,155206406,155205316,155204957,155203539,155203305,155203137,155202960,155202401,155202034,155201569,155201204,155201004,155200610,155200113,155199856,155198602,155198220,155197928,155197659,155197213,155196126,155195899	Gene ID= ENSG00000169231.13 TPM= 4.25 Transcript Type= protein_coding
chr1	155208699	155213823	155208699	155213823	+	ENST00000368376.7@MTX1	ENST00000368376.7	protein_coding	155208699,155210346,155210548,155212127,155212385,155212694,155213237,155213484	155209332,155210415,155210627,155212219,155212567,155212770,155213391,155213823	Gene ID= ENSG00000173171.14 TPM= 15.93 Transcript Type= protein_coding
chr1	155208797	155213823	155208797	155213823	+	ENST00000316721.8@MTX1	ENST00000316721.8	protein_coding	155208797,155210346,155210548,155212385,155212694,155213237,155213484	155209332,155210415,155210627,155212567,155212770,155213391,155213823	Gene ID= ENSG00000173171.14 TPM= 1.06 Transcript Type= protein_coding
chr1	155209251	155213823	155209251	155213823	+	ENST00000481771.5@MTX1	ENST00000481771.5	protein_coding	155209251,155210346,155210548,155212385,155212694,155213237,155213484	155209332,155210415,155212219,155212567,155212770,155213391,155213823	Gene ID= ENSG00000173171.14 TPM= 2.12 Transcript Type= retained_intron
chr1	155209247	155213824	155209247	155213824	+	ENST00000609421.1@MTX1	ENST00000609421.1	protein_coding	155209247,155210346,155210548,155212127,155212385,155212694,155213237,155213484	155209332,155210415,155210627,155212219,155212567,155212770,155213391,155213824	Gene ID= ENSG00000173171.14 TPM= 6.37 Transcript Type= protein_coding
chr1	155234452	155244670	155234452	155244670	-	ENST00000327247.9@GBA	ENST00000327247.9	protein_coding	155244506,155241086,155240630,155239886,155239616,155238517,155238134,155237341,155236245,155235681,155235195,155234452	155244670,155241180,155240717,155240077,155239762,155238650,155238306,155237578,155236469,155235844,155235311,155235100	Gene ID= ENSG00000177628.15 TPM= 9.56 Transcript Type= protein_coding
chr1	155234452	155241234	155234452	155241234	-	ENST00000368373.7@GBA	ENST00000368373.7	protein_coding	155241086,155240630,155239886,155239616,155238517,155238134,155237341,155236245,155235681,155235195,155234452	155241234,155240717,155240077,155239762,155238650,155238306,155237578,155236469,155235844,155235311,155235100	Gene ID= ENSG00000177628.15 TPM= 8.5 Transcript Type= protein_coding
chr1	155252749	155255483	155252749	155255483	-	ENST00000481822.1@FAM189B	ENST00000481822.1	protein_coding	155254653,155254400,155254084,155253859,155252749	155255483,155254456,155254194,155253978,155253732	Gene ID= ENSG00000160767.20 TPM= 3.19 Transcript Type= retained_intron
chr1	155255981	155262430	155255981	155262430	-	ENST00000355379.3@SCAMP3	ENST00000355379.3	protein_coding	155262086,155260537,155260330,155258826,155257498,155257285,155256674,155255981	155262430,155260659,155260450,155258954,155257657,155257386,155256791,155256419	Gene ID= ENSG00000116521.10 TPM= 27.44 Transcript Type= protein_coding
chr1	155255979	155262259	155255979	155262259	-	ENST00000302631.7@SCAMP3	ENST00000302631.7	protein_coding	155262086,155261657,155260537,155260330,155258826,155257498,155257285,155256674,155255979	155262259,155261734,155260659,155260450,155258954,155257657,155257386,155256791,155256419	Gene ID= ENSG00000116521.10 TPM= 64.61 Transcript Type= protein_coding
chr1	155308852	155320665	155308852	155320665	+	ENST00000368356.8@FDPS	ENST00000368356.8	protein_coding	155308852,155309789,155310043,155312255,155317941,155318169,155318665,155318856,155319611,155319794,155320409	155308965,155309965,155310205,155312395,155318021,155318291,155318753,155318928,155319688,155319928,155320665	Gene ID= ENSG00000160752.14 TPM= 9.03 Transcript Type= protein_coding
chr1	155309669	155320665	155309669	155320665	+	transcript7638.chr1.nic@FDPS	transcript7638.chr1.nic	protein_coding	155309669,155310043,155312255,155317941,155318169,155318665,155318856,155319611,155319794,155320409	155309965,155310205,155312395,155318021,155318291,155318753,155318928,155319688,155319928,155320665	Gene ID= ENSG00000160752.14 TPM= 6.9 Transcript Type= NA
chr1	155308889	155320647	155308889	155320647	+	ENST00000467076.5@FDPS	ENST00000467076.5	protein_coding	155308889,155310064,155312255,155317941,155318169,155318665,155318856,155319611,155319794,155320409	155308965,155310205,155312395,155318021,155318291,155318753,155318928,155319688,155319928,155320647	Gene ID= ENSG00000160752.14 TPM= 49.92 Transcript Type= protein_coding
chr1	155308970	155320637	155308970	155320637	+	ENST00000612683.1@FDPS	ENST00000612683.1	protein_coding	155308970,155310064,155312255,155317941,155318169,155318665,155318856,155319611,155319794,155320409	155309076,155310205,155312395,155318021,155318291,155318753,155318928,155319688,155319928,155320637	Gene ID= ENSG00000160752.14 TPM= 3.19 Transcript Type= protein_coding
chr1	155323491	155331114	155323491	155331114	+	transcript7647.chr1.nic@RUSC1	transcript7647.chr1.nic	protein_coding	155323491,155324845,155325102,155325316,155325567,155325864,155326580,155328150,155330403	155323727,155324943,155325178,155325490,155325672,155325910,155327132,155328275,155331114	Gene ID= ENSG00000160753.15 TPM= 5.47 Transcript Type= NA
chr1	155323937	155331114	155323937	155331114	+	ENST00000368347.8@RUSC1	ENST00000368347.8	protein_coding	155323937,155324845,155325102,155325316,155325567,155325864,155326580,155328150,155330403	155324544,155324943,155325178,155325490,155325672,155325910,155327132,155328275,155331114	Gene ID= ENSG00000160753.15 TPM= 7.59 Transcript Type= protein_coding
chr1	155320927	155331114	155320927	155331114	+	ENST00000368352.9@RUSC1	ENST00000368352.9	protein_coding	155320927,155321688,155324845,155325102,155325316,155325567,155325864,155326580,155328150,155330403	155320991,155323130,155324943,155325178,155325490,155325672,155325910,155327132,155328275,155331114	Gene ID= ENSG00000160753.15 TPM= 2.81 Transcript Type= protein_coding
chr1	155324513	155331112	155324513	155331112	+	ENST00000368349.8@RUSC1	ENST00000368349.8	protein_coding	155324513,155324845,155325102,155325316,155325567,155325864,155326580,155328150,155330403	155324587,155324943,155325178,155325490,155325672,155325910,155327132,155328275,155331112	Gene ID= ENSG00000160753.15 TPM= 2.02 Transcript Type= protein_coding
chr1	155324577	155331114	155324577	155331114	+	ENST00000292254.8@RUSC1	ENST00000292254.8	protein_coding	155324577,155325102,155325316,155325567,155325864,155326580,155328150,155330403	155324943,155325178,155325490,155325672,155325910,155327132,155328275,155331114	Gene ID= ENSG00000160753.15 TPM= 4.41 Transcript Type= protein_coding
chr1	155336055	155562532	155336055	155562532	-	ENST00000392403.7@ASH1L	ENST00000392403.7	protein_coding	155562153,155521100,155477886,155459797,155438327,155415744,155395459,155380043,155378503,155378281,155370777,155370504,155360301,155357585,155357316,155354473,155352706,155349542,155349327,155347656,155346383,155344183,155343604,155343314,155341936,155339328,155338089,155336055	155562532,155521618,155482449,155459898,155439068,155415923,155395553,155380116,155378548,155378389,155370983,155370650,155360409,155357749,155357410,155354630,155352858,155349596,155349459,155347904,155346469,155344273,155343742,155343486,155342102,155339368,155338390,155337751	Gene ID= ENSG00000116539.12 TPM= 6.37 Transcript Type= protein_coding
chr1	155335779	155335898	155335779	155335898	-	transcript7662.chr1.nnic@NA	transcript7662.chr1.nnic	NA	155335779	155335898	Gene ID= novel_gene_chr1_7663 TPM= 2.12 Transcript Type= NA
chr1	155480736	155562840	155480736	155562840	-	transcript7665.chr1.nic@ASH1L	transcript7665.chr1.nic	protein_coding	155562779,155562153,155521100,155480736	155562840,155562295,155521618,155482449	Gene ID= ENSG00000116539.12 TPM= 4.6 Transcript Type= NA
chr1	155480736	155562836	155480736	155562836	-	transcript7667.chr1.nic@ASH1L	transcript7667.chr1.nic	protein_coding	155562153,155521100,155480736	155562836,155521618,155482449	Gene ID= ENSG00000116539.12 TPM= 20.53 Transcript Type= NA
chr1	155480736	155562840	155480736	155562840	-	transcript7668.chr1.nnic@ASH1L	transcript7668.chr1.nnic	protein_coding	155562779,155521100,155480736	155562840,155521618,155482449	Gene ID= ENSG00000116539.12 TPM= 6.72 Transcript Type= NA
chr1	155610225	155614967	155610225	155614967	+	ENST00000245564.6@MSTO1	ENST00000245564.6	protein_coding	155610225,155610425,155611039,155611216,155611549,155611689,155611983,155612182,155612418,155612844,155613049,155613462,155613657,155614059	155610332,155610560,155611108,155611291,155611603,155611827,155612100,155612316,155612570,155612975,155613233,155613566,155613766,155614967	Gene ID= ENSG00000125459.14 TPM= 11.68 Transcript Type= protein_coding
chr1	155659446	155688715	155659446	155688715	-	transcript7700.chr1.nnic@YY1AP1	transcript7700.chr1.nnic	protein_coding	155688659,155688071,155680416,155679409,155676548,155675010,155672560,155670320,155668627,155661307,155659446	155688715,155688201,155680456,155679512,155676746,155675096,155672731,155670464,155668695,155661423,155660913	Gene ID= ENSG00000163374.19 TPM= 6.64 Transcript Type= NA
chr1	155659446	155688776	155659446	155688776	-	transcript7703.chr1.nic@YY1AP1	transcript7703.chr1.nic	protein_coding	155688659,155688071,155680416,155679409,155676548,155675010,155672521,155670320,155668627,155661307,155659446	155688776,155688201,155680456,155679512,155676746,155675096,155672731,155670464,155668777,155661423,155660913	Gene ID= ENSG00000163374.19 TPM= 5.58 Transcript Type= NA
chr1	155659446	155688714	155659446	155688714	-	transcript7706.chr1.nic@YY1AP1	transcript7706.chr1.nic	protein_coding	155688659,155680416,155679409,155676548,155675010,155672560,155670320,155668627,155661307,155659446	155688714,155680456,155679512,155676746,155675096,155672731,155670464,155668717,155661423,155660913	Gene ID= ENSG00000163374.19 TPM= 6.11 Transcript Type= NA
chr1	155659446	155688774	155659446	155688774	-	ENST00000359205.9@YY1AP1	ENST00000359205.9	protein_coding	155688659,155688071,155679409,155676548,155675010,155672560,155670320,155668627,155661307,155659446	155688774,155688201,155679512,155676746,155675096,155672731,155670464,155668777,155661423,155660913	Gene ID= ENSG00000163374.19 TPM= 6.64 Transcript Type= protein_coding
chr1	155659456	155688776	155659456	155688776	-	transcript7710.chr1.nic@YY1AP1	transcript7710.chr1.nic	protein_coding	155688659,155688071,155680416,155679409,155676548,155675010,155672560,155670320,155668627,155659456	155688776,155688201,155680456,155679512,155676746,155675096,155672731,155670464,155668717,155661423	Gene ID= ENSG00000163374.19 TPM= 6.64 Transcript Type= NA
chr1	155659461	155688776	155659461	155688776	-	transcript7718.chr1.nnic@YY1AP1	transcript7718.chr1.nnic	protein_coding	155688659,155688071,155680416,155679409,155676548,155675010,155672560,155670320,155659461	155688776,155688201,155680456,155679512,155676746,155675096,155672731,155670464,155660913	Gene ID= ENSG00000163374.19 TPM= 10.89 Transcript Type= NA
chr1	155671739	155688776	155671739	155688776	-	transcript7725.chr1.nic@YY1AP1	transcript7725.chr1.nic	protein_coding	155688659,155688071,155680416,155679409,155676548,155675010,155671739	155688776,155688201,155680456,155679512,155676746,155675096,155672731	Gene ID= ENSG00000163374.19 TPM= 8.5 Transcript Type= NA
chr1	155659446	155688748	155659446	155688748	-	ENST00000361140.8@YY1AP1	ENST00000361140.8	protein_coding	155688659,155688071,155680416,155679409,155676548,155675010,155672560,155670320,155668627,155661307,155659446	155688748,155688201,155680456,155679512,155676746,155675096,155672727,155670464,155668777,155661423,155660913	Gene ID= ENSG00000163374.19 TPM= 7.7 Transcript Type= nonsense_mediated_decay
chr1	155659446	155688757	155659446	155688757	-	ENST00000404643.5@YY1AP1	ENST00000404643.5	protein_coding	155688659,155688071,155680416,155679409,155676548,155675010,155672560,155670320,155668627,155661307,155659446	155688757,155688201,155680456,155679512,155676746,155675096,155672731,155670464,155668717,155661423,155660913	Gene ID= ENSG00000163374.19 TPM= 24.16 Transcript Type= protein_coding
chr1	155687948	155738529	155687948	155738529	+	transcript7681.chr1.nic@DAP3	transcript7681.chr1.nic	protein_coding	155687948,155689095,155709773,155717006,155721517,155725382,155725927,155727608,155729042,155729208,155731356,155731944,155736946,155738157	155688192,155689174,155709824,155717128,155721618,155725490,155726019,155727738,155729122,155729366,155731415,155732033,155737063,155738529	Gene ID= ENSG00000132676.15 TPM= 2.12 Transcript Type= NA
chr1	155689042	155738529	155689042	155738529	+	transcript7698.chr1.nnic@DAP3	transcript7698.chr1.nnic	protein_coding	155689042,155709773,155725382,155725927,155727608,155729042,155729208,155731356,155731944,155736946,155738157	155689174,155709824,155725490,155726019,155727738,155729122,155729366,155731415,155732033,155737063,155738529	Gene ID= ENSG00000132676.15 TPM= 4.25 Transcript Type= NA
chr1	155689058	155739010	155689058	155739010	+	ENST00000368336.9@DAP3	ENST00000368336.9	protein_coding	155689058,155709773,155717006,155721517,155725382,155725927,155727608,155729042,155729208,155731356,155731944,155736946,155738157	155689174,155709824,155717128,155721618,155725490,155726019,155727738,155729122,155729366,155731415,155732033,155737063,155739010	Gene ID= ENSG00000132676.15 TPM= 7.44 Transcript Type= protein_coding
chr1	155689083	155738526	155689083	155738526	+	ENST00000343043.7@DAP3	ENST00000343043.7	protein_coding	155689083,155709773,155717006,155721517,155725382,155725927,155727608,155729042,155729208,155731356,155731944,155736946,155738157	155689243,155709824,155717128,155721618,155725490,155726019,155727738,155729122,155729366,155731415,155732033,155737063,155738526	Gene ID= ENSG00000132676.15 TPM= 10.62 Transcript Type= protein_coding
chr1	155689091	155738526	155689091	155738526	+	ENST00000421487.6@DAP3	ENST00000421487.6	protein_coding	155689091,155709773,155717006,155725382,155725927,155727608,155729042,155729208,155731356,155731944,155736946,155738157	155689174,155709824,155717128,155725490,155726019,155727738,155729122,155729366,155731415,155732033,155737063,155738526	Gene ID= ENSG00000132676.15 TPM= 2.12 Transcript Type= protein_coding
chr1	155764784	155816795	155764784	155816795	-	transcript7685.chr1.nnic@GON4L	transcript7685.chr1.nnic	protein_coding	155815805,155814330,155813634,155804949,155795050,155785334,155783986,155777622,155776395,155775002,155773066,155771067,155767425,155764784	155816795,155814449,155813804,155805141,155795151,155785374,155784091,155777820,155776481,155775173,155773210,155771217,155767541,155766709	Gene ID= ENSG00000116580.18 TPM= 7.44 Transcript Type= NA
chr1	155749717	155859400	155749717	155859400	-	ENST00000437809.5@GON4L	ENST00000437809.5	protein_coding	155859304,155853276,155826837,155822286,155821474,155820606,155816212,155815805,155814330,155813634,155804949,155795050,155785334,155783986,155777622,155776395,155775002,155773066,155771067,155767425,155765000,155763312,155762190,155760444,155757891,155757180,155756958,155754375,155753204,155751960,155751767,155749717	155859400,155853806,155827028,155822476,155821548,155820656,155816262,155815900,155814449,155813804,155805141,155795151,155785374,155784089,155777820,155776481,155775173,155773210,155771217,155767541,155766709,155763564,155762374,155760641,155758034,155757323,155757077,155754488,155753414,155752587,155751869,155750733	Gene ID= ENSG00000116580.18 TPM= 9.56 Transcript Type= protein_coding
chr1	155859509	155885199	155859509	155885199	+	ENST00000368324.4@SYT11	ENST00000368324.4	protein_coding	155859509,155867965,155880500,155881198	155859795,155868791,155880623,155885199	Gene ID= ENSG00000132718.8 TPM= 15.93 Transcript Type= protein_coding
chr1	155897808	155911404	155897808	155911404	-	ENST00000368323.7@RIT1	ENST00000368323.7	protein_coding	155911243,155910656,155910450,155904731,155904311,155897808	155911404,155910804,155910506,155904804,155904502,155900618	Gene ID= ENSG00000143622.10 TPM= 1.06 Transcript Type= protein_coding
chr1	155900183	155911402	155900183	155911402	-	ENST00000539040.5@RIT1	ENST00000539040.5	protein_coding	155911243,155910450,155904731,155904311,155900183	155911402,155910506,155904804,155904502,155900618	Gene ID= ENSG00000143622.10 TPM= 1.06 Transcript Type= protein_coding
chr1	155909240	155909935	155909240	155909935	+	transcript7746.chr1.nnic@NA	transcript7746.chr1.nnic	NA	155909240	155909935	Gene ID= novel_gene_chr1_7747 TPM= 2.12 Transcript Type= NA
chr1	155913043	155934397	155913043	155934397	-	ENST00000368321.7@KIAA0907	ENST00000368321.7	protein_coding	155934336,155933633,155929712,155929296,155927104,155926676,155925632,155923627,155921861,155921375,155917499,155916625,155915873,155913043	155934397,155933849,155929840,155929375,155927156,155926839,155925843,155923687,155921918,155921628,155917672,155916737,155915964,155914320	Gene ID= ENSG00000132680.10 TPM= 13.81 Transcript Type= protein_coding
chr1	155946851	155978160	155946851	155978160	-	ENST00000313695.11@ARHGEF2	ENST00000313695.11	protein_coding	155978067,155969156,155966820,155966416,155965631,155965303,155964988,155962933,155962593,155962105,155961661,155958320,155957713,155954902,155952628,155952116,155951919,155951741,155951483,155950829,155950299,155946851	155978160,155969300,155966887,155966479,155965760,155965412,155965128,155963183,155962718,155962222,155961909,155958396,155957882,155954969,155952828,155952235,155951986,155951776,155951533,155951272,155950482,155948015	Gene ID= ENSG00000116584.17 TPM= 78.6 Transcript Type= protein_coding
chr1	155966896	155971590	155966896	155971590	+	transcript7766.chr1.nnic@NA	transcript7766.chr1.nnic	NA	155966896	155971590	Gene ID= novel_gene_chr1_7767 TPM= 12.75 Transcript Type= NA
chr1	155972699	155974915	155972699	155974915	-	transcript7768.chr1.nnic@NA	transcript7768.chr1.nnic	NA	155972699	155974915	Gene ID= novel_gene_chr1_7769 TPM= 6.37 Transcript Type= NA
chr1	156009049	156018232	156009049	156018232	-	transcript7772.chr1.nic@SSR2	transcript7772.chr1.nic	protein_coding	156018132,156011810,156009049	156018232,156011887,156009650	Gene ID= ENSG00000163479.13 TPM= 6.37 Transcript Type= NA
chr1	156035301	156053794	156035301	156053794	-	ENST00000368309.3@UBQLN4	ENST00000368309.3	protein_coding	156053594,156051706,156051110,156050291,156048501,156043998,156042774,156042153,156041872,156041485,156035301	156053794,156051857,156051327,156050553,156048659,156044223,156042913,156042236,156041987,156041671,156037130	Gene ID= ENSG00000160803.7 TPM= 38.24 Transcript Type= protein_coding
chr1	156054752	156058510	156054752	156058510	+	ENST00000368305.8@LAMTOR2	ENST00000368305.8	protein_coding	156054752,156055263,156057978,156058315	156054957,156055425,156058067,156058510	Gene ID= ENSG00000116586.11 TPM= 101.44 Transcript Type= protein_coding
chr1	156054792	156058506	156054792	156058506	+	ENST00000368304.9@LAMTOR2	ENST00000368304.9	protein_coding	156054792,156055263,156058315	156054957,156055425,156058506	Gene ID= ENSG00000116586.11 TPM= 15.4 Transcript Type= protein_coding
chr1	156106679	156139303	156106679	156139303	+	transcript7784.chr1.nnic@LMNA	transcript7784.chr1.nnic	protein_coding	156106679,156114670,156130617,156134403,156134805,156135187,156135901,156136214,156136921,156137113,156137654,156138488,156139080	156106823,156115274,156130773,156134528,156134975,156135312,156136121,156136436,156137028,156137232,156137743,156138757,156139303	Gene ID= ENSG00000160789.19 TPM= 13.81 Transcript Type= NA
chr1	156114707	156140089	156114707	156140089	+	ENST00000368300.8@LMNA	ENST00000368300.8	protein_coding	156114707,156130617,156134403,156134805,156135187,156135901,156136214,156136921,156137113,156137654,156138488,156139080	156115274,156130773,156134528,156134975,156135312,156136121,156136436,156137028,156137232,156137743,156138757,156140089	Gene ID= ENSG00000160789.19 TPM= 43.55 Transcript Type= protein_coding
chr1	156137803	156139315	156137803	156139315	+	transcript7792.chr1.nnic@NA	transcript7792.chr1.nnic	NA	156137803	156139315	Gene ID= novel_gene_chr1_7793 TPM= 7.44 Transcript Type= NA
chr1	156194089	156212796	156194089	156212796	+	ENST00000359511.4@SLC25A44	ENST00000359511.4	protein_coding	156194089,156199835,156207886,156210240	156194247,156200472,156208013,156212796	Gene ID= ENSG00000160785.13 TPM= 19.12 Transcript Type= protein_coding
chr1	156212982	156243332	156212982	156243332	+	ENST00000490491.5@PMF1-BGLAP	ENST00000490491.5	protein_coding	156212982,156232320,156233628,156236288,156242553,156242762,156243033	156213176,156232425,156233728,156236483,156242591,156242831,156243332	Gene ID= ENSG00000260238.6 TPM= 9.56 Transcript Type= protein_coding
chr1	156213007	156240042	156213007	156240042	+	ENST00000368277.3@PMF1	ENST00000368277.3	protein_coding	156213007,156232320,156233628,156236288,156239548	156213176,156232425,156233728,156236483,156240042	Gene ID= ENSG00000160783.19 TPM= 33.99 Transcript Type= protein_coding
chr1	156249224	156282825	156249224	156282825	-	ENST00000361813.5@SMG5	ENST00000361813.5	protein_coding	156282607,156278936,156277925,156277085,156274597,156273361,156272320,156268290,156268115,156267470,156266541,156265781,156263395,156261333,156260451,156259005,156253449,156252919,156252414,156251403,156250858,156249224	156282825,156279034,156278048,156277241,156274686,156273450,156272398,156268415,156268183,156267678,156266678,156266380,156263570,156261408,156260626,156259163,156253508,156253078,156252504,156251477,156250996,156250670	Gene ID= ENSG00000198952.8 TPM= 139.14 Transcript Type= protein_coding
chr1	156282948	156292443	156282948	156292443	+	ENST00000295694.9@TMEM79	ENST00000295694.9	protein_coding	156282948,156285184,156286260,156291385	156283065,156285983,156286473,156292443	Gene ID= ENSG00000163472.18 TPM= 5.31 Transcript Type= protein_coding
chr1	156292687	156295689	156292687	156295689	-	ENST00000622703.4@GLMP	ENST00000622703.4	protein_coding	156295526,156294365,156294018,156293320,156292687	156295689,156294565,156294236,156293576,156293209	Gene ID= ENSG00000198715.11 TPM= 4.25 Transcript Type= protein_coding
chr1	156290089	156291528	156290089	156291528	-	transcript7824.chr1.nnic@GLMP	transcript7824.chr1.nnic	protein_coding	156291403,156290089	156291528,156290360	Gene ID= ENSG00000198715.11 TPM= 2.12 Transcript Type= NA
chr1	156292688	156295672	156292688	156295672	-	ENST00000362007.5@GLMP	ENST00000362007.5	protein_coding	156295526,156294759,156294365,156294018,156293320,156292688	156295672,156295016,156294565,156294236,156293576,156293209	Gene ID= ENSG00000198715.11 TPM= 6.37 Transcript Type= protein_coding
chr1	156308968	156338465	156308968	156338465	-	ENST00000295688.7@CCT3	ENST00000295688.7	protein_coding	156338154,156335827,156334868,156334713,156333547,156324972,156320839,156318868,156317415,156317166,156312041,156310950,156310558,156308968	156338465,156335888,156334918,156334775,156333643,156325089,156321025,156319017,156317547,156317247,156312221,156311195,156310689,156309303	Gene ID= ENSG00000163468.14 TPM= 325.11 Transcript Type= protein_coding
chr1	156308969	156338245	156308969	156338245	-	ENST00000368259.6@CCT3	ENST00000368259.6	protein_coding	156338154,156335827,156333547,156324972,156320839,156318868,156317415,156317166,156312041,156310950,156310558,156308969	156338245,156335888,156333643,156325089,156321025,156319017,156317547,156317247,156312221,156311195,156310689,156309303	Gene ID= ENSG00000163468.14 TPM= 15.49 Transcript Type= protein_coding
chr1	156309014	156338247	156309014	156338247	-	ENST00000368262.7@CCT3	ENST00000368262.7	protein_coding	156338154,156337079,156335827,156334868,156334713,156333547,156324972,156320839,156318868,156317415,156317166,156312041,156310950,156310558,156309014	156338247,156337240,156335888,156334918,156334775,156333643,156325089,156321025,156319017,156317547,156317247,156312221,156311195,156310689,156309303	Gene ID= ENSG00000163468.14 TPM= 1.06 Transcript Type= nonsense_mediated_decay
chr1	156463727	156500828	156463727	156500828	-	ENST00000348159.8@MEF2D	ENST00000348159.8	protein_coding	156500486,156483239,156482437,156480834,156479586,156479290,156477012,156476494,156475108,156468780,156467993,156463727	156500828,156483430,156482640,156480971,156479796,156479346,156477202,156476514,156475237,156469020,156468299,156467656	Gene ID= ENSG00000116604.17 TPM= 37.18 Transcript Type= protein_coding
chr1	156485703	156489148	156485703	156489148	-	transcript7845.chr1.nnic@NA	transcript7845.chr1.nnic	NA	156485703	156489148	Gene ID= novel_gene_chr1_7846 TPM= 3.19 Transcript Type= NA
chr1	156489417	156495776	156489417	156495776	+	transcript7843.chr1.nnic@NA	transcript7843.chr1.nnic	NA	156489417	156495776	Gene ID= novel_gene_chr1_7844 TPM= 95.59 Transcript Type= NA
chr1	156591762	156594299	156591762	156594299	+	ENST00000368235.7@NAXE	ENST00000368235.7	protein_coding	156591762,156592101,156592365,156592557,156593408,156593882	156591986,156592209,156592475,156592670,156593555,156594299	Gene ID= ENSG00000163382.11 TPM= 64.79 Transcript Type= protein_coding
chr1	156594487	156601483	156594487	156601483	-	ENST00000368232.8@GPATCH4	ENST00000368232.8	protein_coding	156601409,156598968,156598421,156598227,156598035,156596387,156596081,156594487	156601483,156599104,156598494,156598319,156598121,156596478,156596131,156595849	Gene ID= ENSG00000160818.16 TPM= 3.19 Transcript Type= protein_coding
chr1	156668763	156677397	156668763	156677397	-	ENST00000368223.3@NES	ENST00000368223.3	protein_coding	156676482,156675216,156673454,156668763	156677397,156675340,156673527,156673205	Gene ID= ENSG00000132688.10 TPM= 516.21 Transcript Type= protein_coding
chr1	156699606	156705601	156699606	156705601	-	ENST00000368222.7@CRABP2	ENST00000368222.7	protein_coding	156705377,156700874,156700542,156699606	156705601,156701052,156700658,156700076	Gene ID= ENSG00000143320.8 TPM= 2.12 Transcript Type= protein_coding
chr1	156722264	156728448	156722264	156728448	-	transcript7898.chr1.nic@ISG20L2	transcript7898.chr1.nic	protein_coding	156728415,156726906,156724148,156722264	156728448,156727808,156724348,156723462	Gene ID= ENSG00000143319.16 TPM= 3.19 Transcript Type= NA
chr1	156722603	156728799	156722603	156728799	-	ENST00000368219.1@ISG20L2	ENST00000368219.1	protein_coding	156728415,156726906,156724148,156722603	156728799,156727769,156724348,156723462	Gene ID= ENSG00000143319.16 TPM= 1.06 Transcript Type= protein_coding
chr1	156728475	156736949	156728475	156736949	+	ENST00000368216.8@RRNAD1	ENST00000368216.8	protein_coding	156728475,156731991,156732281,156732985,156733377,156734009,156735725,156736632	156729215,156732115,156732473,156733047,156733520,156734493,156735909,156736949	Gene ID= ENSG00000143303.11 TPM= 3.19 Transcript Type= protein_coding
chr1	156728442	156736949	156728442	156736949	+	ENST00000368218.8@RRNAD1	ENST00000368218.8	protein_coding	156728442,156731991,156732281,156732985,156733377,156735725,156736632	156729215,156732115,156732473,156733047,156733520,156735909,156736949	Gene ID= ENSG00000143303.11 TPM= 5.31 Transcript Type= protein_coding
chr1	156737305	156741131	156737305	156741131	-	ENST00000368211.8@MRPL24	ENST00000368211.8	protein_coding	156741053,156738522,156738343,156738031,156737646,156737305	156741131,156738764,156738438,156738134,156737776,156737534	Gene ID= ENSG00000143314.12 TPM= 25.49 Transcript Type= protein_coding
chr1	156737303	156741088	156737303	156741088	-	ENST00000361531.6@MRPL24	ENST00000361531.6	protein_coding	156741012,156738522,156738343,156738031,156737646,156737303	156741088,156738764,156738438,156738134,156737776,156737534	Gene ID= ENSG00000143314.12 TPM= 20.18 Transcript Type= protein_coding
chr1	156739830	156741114	156739830	156741114	-	transcript7924.chr1.nnic@NA	transcript7924.chr1.nnic	NA	156739830	156741114	Gene ID= novel_gene_chr1_7925 TPM= 3.19 Transcript Type= NA
chr1	156742107	156751744	156742107	156751744	-	ENST00000357325.9@HDGF	ENST00000357325.9	protein_coding	156751343,156745297,156745008,156744163,156743652,156742107	156751744,156745373,156745146,156744348,156743878,156743455	Gene ID= ENSG00000143321.18 TPM= 243.42 Transcript Type= protein_coding
chr1	156767500	156800817	156767500	156800817	+	ENST00000271526.8@PRCC	ENST00000271526.8	protein_coding	156767500,156782282,156786608,156791697,156794665,156797276,156800374	156768239,156782329,156787174,156791792,156794808,156797341,156800817	Gene ID= ENSG00000143294.14 TPM= 86.04 Transcript Type= protein_coding
chr1	156787652	156790303	156787652	156790303	-	transcript7948.chr1.nnic@NA	transcript7948.chr1.nnic	NA	156787652	156790303	Gene ID= novel_gene_chr1_7949 TPM= 6.37 Transcript Type= NA
chr1	156893720	156916429	156893720	156916429	+	ENST00000338302.7@PEAR1	ENST00000338302.7	protein_coding	156893720,156902188,156903918,156904748,156905324,156906276,156906637,156907610,156907915,156908128,156908655,156908916,156909751,156910006,156910234,156910618,156912247,156912494,156912770,156913194,156913391,156913692,156913852,156914647	156893837,156902285,156904027,156904852,156905424,156906368,156906880,156907730,156908051,156908340,156908829,156909036,156909914,156910108,156910380,156910743,156912375,156912622,156912982,156913282,156913523,156913760,156914100,156916429	Gene ID= ENSG00000187800.13 TPM= 5.31 Transcript Type= protein_coding
chr1	157045203	157046015	157045203	157046015	-	transcript7958.chr1.nnic@NA	transcript7958.chr1.nnic	NA	157045203	157046015	Gene ID= novel_gene_chr1_7959 TPM= 4.25 Transcript Type= NA
chr1	157830914	157841798	157830914	157841798	-	ENST00000368174.4@CD5L	ENST00000368174.4	protein_coding	157841674,157839384,157835835,157834407,157833192,157830914	157841798,157839410,157836155,157834748,157833512,157831968	Gene ID= ENSG00000073754.5 TPM= 1.06 Transcript Type= protein_coding
chr1	158092346	158100261	158092346	158100261	+	transcript7965.chr1.nnic@KIRREL1	transcript7965.chr1.nnic	protein_coding	158092346,158094311,158094644	158093762,158094390,158100261	Gene ID= ENSG00000183853.17 TPM= 8.5 Transcript Type= NA
chr1	158831317	158849504	158831317	158849504	+	ENST00000368141.4@MNDA	ENST00000368141.4	protein_coding	158831317,158842134,158843279,158843955,158845587,158847728,158849190	158831557,158842418,158843415,158844122,158846003,158847916,158849504	Gene ID= ENSG00000163563.7 TPM= 3.19 Transcript Type= protein_coding
chr1	159009907	159055151	159009907	159055151	+	transcript7973.chr1.nic@IFI16	transcript7973.chr1.nic	protein_coding	159009907,159014661,159015872,159016533,159018229,159020341,159032524,159051679,159053533,159054821	159010161,159014945,159015987,159016700,159018651,159020529,159032691,159052098,159053724,159055151	Gene ID= ENSG00000163565.18 TPM= 6.02 Transcript Type= NA
chr1	159009927	159055155	159009927	159055155	+	ENST00000295809.11@IFI16	ENST00000295809.11	protein_coding	159009927,159014661,159015872,159016533,159018229,159020341,159032524,159045297,159049432,159051679,159053533,159054821	159010161,159014945,159015987,159016700,159018651,159020529,159032691,159045464,159049599,159052098,159053724,159055155	Gene ID= ENSG00000163565.18 TPM= 2.84 Transcript Type= protein_coding
chr1	159009918	159055151	159009918	159055151	+	ENST00000368132.7@IFI16	ENST00000368132.7	protein_coding	159009918,159014661,159015872,159016533,159018229,159020341,159032524,159049432,159051679,159053533,159054821	159010161,159014945,159015987,159016700,159018651,159020529,159032691,159049599,159052098,159053724,159055151	Gene ID= ENSG00000163565.18 TPM= 7.08 Transcript Type= protein_coding
chr1	159171609	159203313	159171609	159203313	+	ENST00000368125.8@CADM3	ENST00000368125.8	protein_coding	159171609,159191936,159192578,159193423,159193870,159196364,159196891,159199751,159200804	159171853,159192076,159192730,159193560,159194040,159196454,159197060,159199876,159203313	Gene ID= ENSG00000162706.12 TPM= 1.06 Transcript Type= protein_coding
chr1	159204281	159206500	159204281	159206500	+	ENST00000368122.2@ACKR1	ENST00000368122.2	protein_coding	159204281,159205461	159204980,159206500	Gene ID= ENSG00000213088.9 TPM= 30.8 Transcript Type= protein_coding
chr1	159289714	159308224	159289714	159308224	+	ENST00000368115.5@FCER1A	ENST00000368115.5	protein_coding	159289714,159302306,159302854,159303928,159305988,159307748	159289753,159302419,159302874,159304182,159306245,159308224	Gene ID= ENSG00000179639.10 TPM= 1.06 Transcript Type= protein_coding
chr1	159780960	159782543	159780960	159782543	+	ENST00000368108.7@DUSP23	ENST00000368108.7	protein_coding	159780960,159781099,159782153	159780993,159781367,159782543	Gene ID= ENSG00000158716.8 TPM= 15.4 Transcript Type= protein_coding
chr1	159781003	159782543	159781003	159782543	+	ENST00000368107.1@DUSP23	ENST00000368107.1	protein_coding	159781003,159782153	159781367,159782543	Gene ID= ENSG00000158716.8 TPM= 13.28 Transcript Type= protein_coding
chr1	159780977	159782543	159780977	159782543	+	transcript7981.chr1.nnic@NA	transcript7981.chr1.nnic	NA	159780977	159782543	Gene ID= novel_gene_chr1_7982 TPM= 2.12 Transcript Type= NA
chr1	159918107	159925732	159918107	159925732	-	ENST00000368097.8@TAGLN2	ENST00000368097.8	protein_coding	159925450,159920330,159919661,159919274,159918107	159925732,159920537,159919835,159919376,159918941	Gene ID= ENSG00000158710.14 TPM= 100.91 Transcript Type= protein_coding
chr1	159918112	159921173	159918112	159921173	-	transcript7989.chr1.nnic@NA	transcript7989.chr1.nnic	NA	159918112	159921173	Gene ID= novel_gene_chr1_7990 TPM= 4.25 Transcript Type= NA
chr1	160029779	160031988	160029779	160031988	-	transcript7991.chr1.nnic@NA	transcript7991.chr1.nnic	NA	160029779	160031988	Gene ID= novel_gene_chr1_7992 TPM= 9.56 Transcript Type= NA
chr1	160091340	160098964	160091340	160098964	-	transcript7995.chr1.nic@IGSF8	transcript7995.chr1.nic	protein_coding	160098834,160098409,160094869,160093710,160092924,160092282,160091808,160091340	160098964,160098517,160095246,160094171,160093331,160092695,160091938,160091608	Gene ID= ENSG00000162729.13 TPM= 15.14 Transcript Type= NA
chr1	160091340	160098689	160091340	160098689	-	ENST00000314485.11@IGSF8	ENST00000314485.11	protein_coding	160098409,160094869,160093710,160092924,160092282,160091808,160091340	160098689,160095246,160094171,160093331,160092695,160091938,160091608	Gene ID= ENSG00000162729.13 TPM= 53.37 Transcript Type= protein_coding
chr1	160091340	160098865	160091340	160098865	-	transcript7998.chr1.nnic@IGSF8	transcript7998.chr1.nnic	protein_coding	160098834,160094869,160093710,160092924,160092282,160091808,160091340	160098865,160095246,160094171,160093331,160092695,160091938,160091608	Gene ID= ENSG00000162729.13 TPM= 5.76 Transcript Type= NA
chr1	160091340	160098689	160091340	160098689	-	ENST00000368086.5@IGSF8	ENST00000368086.5	protein_coding	160098409,160094869,160093710,160092924,160092282,160091808,160091340	160098689,160095246,160094171,160093331,160092695,160091938,160091631	Gene ID= ENSG00000162729.13 TPM= 3.72 Transcript Type= protein_coding
chr1	160091340	160098673	160091340	160098673	-	transcript8001.chr1.nic@IGSF8	transcript8001.chr1.nic	protein_coding	160098409,160094869,160093710,160092282,160091808,160091340	160098673,160095246,160094171,160093331,160091938,160091608	Gene ID= ENSG00000162729.13 TPM= 3.45 Transcript Type= NA
chr1	160091350	160098828	160091350	160098828	-	ENST00000614243.4@IGSF8	ENST00000614243.4	protein_coding	160098799,160098409,160094869,160093710,160092924,160092282,160091808,160091350	160098828,160098517,160095246,160094171,160093331,160092695,160091938,160091608	Gene ID= ENSG00000162729.13 TPM= 7.79 Transcript Type= protein_coding
chr1	160127672	160143591	160127672	160143591	+	ENST00000447527.1@ATP1A2	ENST00000447527.1	protein_coding	160127672,160128652,160128980,160129266,160130102,160130422,160134484,160135145,160135434,160135839,160136247,160136621,160136901,160139640,160139893,160141294	160127820,160128850,160129089,160129400,160130291,160130597,160134620,160135295,160135602,160135993,160136370,160136715,160137031,160139741,160139984,160143591	Gene ID= ENSG00000018625.14 TPM= 20.18 Transcript Type= protein_coding
chr1	160115773	160143591	160115773	160143591	+	ENST00000361216.7@ATP1A2	ENST00000361216.7	protein_coding	160115773,160120906,160121192,160123213,160123943,160124296,160125136,160127552,160128652,160128980,160129266,160130102,160130422,160134484,160135145,160135434,160135839,160136247,160136570,160136901,160139640,160139893,160141294	160115873,160121010,160121251,160123416,160124056,160124430,160125253,160127820,160128850,160129089,160129400,160130291,160130597,160134620,160135295,160135602,160135993,160136370,160136715,160137031,160139741,160139984,160143591	Gene ID= ENSG00000018625.14 TPM= 59.48 Transcript Type= protein_coding
chr1	160190556	160201886	160190556	160201886	+	ENST00000368078.7@CASQ1	ENST00000368078.7	protein_coding	160190556,160192802,160193747,160195012,160195461,160195897,160197569,160198677,160198953,160199851,160201245	160191030,160192886,160193847,160195123,160195534,160196027,160197614,160198731,160199053,160199925,160201886	Gene ID= ENSG00000143318.12 TPM= 50.98 Transcript Type= protein_coding
chr1	160205337	160215376	160205337	160215376	+	ENST00000360472.8@PEA15	ENST00000360472.8	protein_coding	160205337,160211543,160213110,160213422	160205522,160211716,160213265,160215376	Gene ID= ENSG00000162734.12 TPM= 360.6 Transcript Type= protein_coding
chr1	160215715	160262487	160215715	160262487	-	transcript8032.chr1.nic@DCAF8	transcript8032.chr1.nic	protein_coding	160262117,160243960,160239697,160238607,160237135,160231297,160225591,160225062,160224442,160222651,160218849,160218324,160215715	160262487,160244034,160240370,160238747,160237229,160231407,160225663,160225119,160224549,160222781,160218968,160218440,160217708	Gene ID= ENSG00000132716.18 TPM= 8.62 Transcript Type= NA
chr1	160216663	160262484	160216663	160262484	-	transcript8037.chr1.nic@DCAF8	transcript8037.chr1.nic	protein_coding	160262276,160243960,160239697,160238607,160237135,160231297,160225591,160225062,160224442,160222651,160218849,160218324,160216663	160262484,160244034,160240370,160238747,160237229,160231407,160225663,160225119,160224549,160222781,160218968,160218440,160217708	Gene ID= ENSG00000132716.18 TPM= 6.37 Transcript Type= NA
chr1	160237134	160262486	160237134	160262486	-	transcript8055.chr1.nic@DCAF8	transcript8055.chr1.nic	protein_coding	160262117,160261285,160243960,160239697,160238607,160237134	160262486,160261358,160244034,160240370,160238747,160237229	Gene ID= ENSG00000132716.18 TPM= 11.68 Transcript Type= NA
chr1	160215715	160262451	160215715	160262451	-	ENST00000368073.7@DCAF8	ENST00000368073.7	protein_coding	160262117,160261285,160243960,160239697,160238607,160237135,160231297,160225591,160225062,160224442,160222651,160218849,160218324,160215715	160262451,160261358,160244034,160240370,160238747,160237229,160231407,160225663,160225119,160224549,160222781,160218968,160218440,160217708	Gene ID= ENSG00000132716.18 TPM= 19.25 Transcript Type= protein_coding
chr1	160215715	160262501	160215715	160262501	-	ENST00000368074.5@DCAF8	ENST00000368074.5	protein_coding	160262449,160261285,160243960,160239697,160238607,160237135,160231297,160225591,160225062,160224442,160222651,160218849,160218324,160215715	160262501,160261358,160244034,160240370,160238747,160237229,160231407,160225663,160225119,160224549,160222781,160218968,160218440,160217708	Gene ID= ENSG00000132716.18 TPM= 7.56 Transcript Type= protein_coding
chr1	160215715	160262476	160215715	160262476	-	ENST00000326837.6@DCAF8	ENST00000326837.6	protein_coding	160262276,160261285,160243960,160239697,160238607,160237135,160231297,160225591,160225062,160224442,160222651,160218849,160218324,160215715	160262476,160261358,160244034,160240370,160238747,160237229,160231407,160225663,160225119,160224549,160222781,160218968,160218440,160217708	Gene ID= ENSG00000132716.18 TPM= 10.75 Transcript Type= protein_coding
chr1	160239222	160262425	160239222	160262425	-	ENST00000610139.5@DCAF8	ENST00000610139.5	protein_coding	160262117,160261285,160243960,160239222	160262425,160261358,160244034,160240370	Gene ID= ENSG00000132716.18 TPM= 3.19 Transcript Type= protein_coding
chr1	160218954	160221838	160218954	160221838	+	transcript8080.chr1.nnic@NA	transcript8080.chr1.nnic	NA	160218954	160221838	Gene ID= novel_gene_chr1_8081 TPM= 95.06 Transcript Type= NA
chr1	160260717	160262464	160260717	160262464	-	transcript8082.chr1.nnic@NA	transcript8082.chr1.nnic	NA	160260717	160262464	Gene ID= novel_gene_chr1_8083 TPM= 3.19 Transcript Type= NA
chr1	160276812	160285146	160276812	160285146	-	ENST00000368072.9@PEX19	ENST00000368072.9	protein_coding	160285055,160283530,160282944,160282417,160282039,160280070,160279801,160276812	160285146,160283639,160283109,160282502,160282200,160280246,160279845,160279634	Gene ID= ENSG00000162735.18 TPM= 4.78 Transcript Type= protein_coding
chr1	160276867	160285154	160276867	160285154	-	ENST00000472750.5@PEX19	ENST00000472750.5	protein_coding	160285055,160282944,160282417,160282039,160280070,160279801,160276867	160285154,160283109,160282502,160282200,160280246,160279845,160279634	Gene ID= ENSG00000162735.18 TPM= 7.97 Transcript Type= nonsense_mediated_decay
chr1	160289273	160343400	160289273	160343400	-	ENST00000241704.7@COPA	ENST00000241704.7	protein_coding	160343131,160340181,160339909,160335242,160333603,160332448,160325543,160323431,160313990,160313085,160311868,160310192,160309101,160307163,160306354,160305688,160305433,160299102,160298845,160297556,160297343,160296061,160295736,160294768,160294484,160293386,160293166,160292484,160292012,160291819,160291335,160290492,160289273	160343400,160340294,160339982,160335322,160333679,160332557,160325652,160323530,160314125,160313167,160312018,160310258,160309176,160307245,160306493,160305773,160305571,160299264,160298991,160297745,160297438,160296149,160295859,160294857,160294593,160293463,160293234,160292620,160292198,160291929,160291496,160290686,160290216	Gene ID= ENSG00000122218.14 TPM= 67.98 Transcript Type= protein_coding
chr1	160289273	160343248	160289273	160343248	-	ENST00000368069.7@COPA	ENST00000368069.7	protein_coding	160343131,160340181,160339909,160335242,160333603,160332448,160325543,160323431,160313990,160313085,160311868,160310192,160309101,160307163,160306354,160305688,160305433,160299102,160298845,160297556,160297343,160296061,160295736,160294768,160294484,160293386,160293166,160292484,160292012,160291819,160291335,160290492,160289273	160343248,160340294,160339982,160335322,160333679,160332557,160325652,160323530,160314125,160313167,160312018,160310258,160309176,160307245,160306493,160305773,160305598,160299264,160298991,160297745,160297438,160296149,160295859,160294857,160294593,160293463,160293234,160292620,160292198,160291929,160291496,160290686,160290216	Gene ID= ENSG00000122218.14 TPM= 19.12 Transcript Type= protein_coding
chr1	160343272	160358952	160343272	160358952	+	ENST00000294785.9@NCSTN	ENST00000294785.9	protein_coding	160343272,160344722,160348999,160349549,160350105,160351222,160351696,160352054,160352887,160353160,160354118,160355655,160355863,160356260,160356600,160357041,160358149	160343481,160344826,160349122,160349670,160350250,160351372,160351805,160352206,160352991,160353237,160354290,160355757,160355958,160356347,160356754,160357253,160358952	Gene ID= ENSG00000162736.15 TPM= 44.61 Transcript Type= protein_coding
chr1	160343382	160358947	160343382	160358947	+	transcript8117.chr1.nnic@NCSTN	transcript8117.chr1.nnic	protein_coding	160343382,160344722,160348999,160349549,160350105,160351222,160351696,160352054,160352887,160353160,160354118,160355655,160355863,160356260,160356600,160358149	160343481,160344826,160349122,160349670,160350250,160351372,160351805,160352206,160352991,160353237,160354290,160355757,160355958,160356347,160356754,160358947	Gene ID= ENSG00000162736.15 TPM= 9.56 Transcript Type= NA
chr1	160995211	161021348	160995211	161021348	-	ENST00000368026.10@F11R	ENST00000368026.10	protein_coding	161021010,161001285,161001020,161000631,161000146,160999876,160999640,160999396,160999043,160995211	161021348,161001353,161001127,161000777,161000348,160999978,160999747,160999408,160999091,160998906	Gene ID= ENSG00000158769.17 TPM= 15.93 Transcript Type= protein_coding
chr1	161037631	161038950	161037631	161038950	-	ENST00000368023.7@TSTD1	ENST00000368023.7	protein_coding	161038880,161038551,161037913,161037631	161038950,161038694,161038075,161037826	Gene ID= ENSG00000215845.10 TPM= 1.06 Transcript Type= protein_coding
chr1	161037631	161038977	161037631	161038977	-	ENST00000368024.5@TSTD1	ENST00000368024.5	protein_coding	161038880,161037913,161037631	161038977,161038075,161037826	Gene ID= ENSG00000215845.10 TPM= 5.31 Transcript Type= protein_coding
chr1	161037631	161038990	161037631	161038990	-	ENST00000423014.2@TSTD1	ENST00000423014.2	protein_coding	161038880,161038551,161037913,161037631	161038990,161038673,161038075,161037826	Gene ID= ENSG00000215845.10 TPM= 15.93 Transcript Type= protein_coding
chr1	161037631	161038937	161037631	161038937	-	ENST00000318289.14@TSTD1	ENST00000318289.14	protein_coding	161038880,161038551,161037631	161038937,161038673,161038075	Gene ID= ENSG00000215845.10 TPM= 4.25 Transcript Type= protein_coding
chr1	161039251	161045997	161039251	161045997	-	transcript8129.chr1.nic@USF1	transcript8129.chr1.nic	protein_coding	161045858,161043268,161042833,161042555,161042116,161041651,161041324,161040814,161040202,161039251	161045997,161043360,161042882,161042670,161042217,161041846,161041411,161040872,161040670,161040009	Gene ID= ENSG00000158773.14 TPM= 8.32 Transcript Type= NA
chr1	161039251	161045997	161039251	161045997	-	transcript8130.chr1.nic@USF1	transcript8130.chr1.nic	protein_coding	161045858,161043268,161042833,161042586,161042116,161041651,161041324,161040814,161040202,161039251	161045997,161043360,161042882,161042670,161042217,161041846,161041411,161040872,161040670,161040009	Gene ID= ENSG00000158773.14 TPM= 4.07 Transcript Type= NA
chr1	161039251	161045977	161039251	161045977	-	ENST00000368021.7@USF1	ENST00000368021.7	protein_coding	161045858,161043268,161042833,161042555,161042116,161041651,161041324,161040814,161040576,161040202,161039251	161045977,161043360,161042882,161042670,161042217,161041846,161041411,161040872,161040670,161040330,161040009	Gene ID= ENSG00000158773.14 TPM= 19.47 Transcript Type= protein_coding
chr1	161046948	161069945	161046948	161069945	-	ENST00000368013.7@ARHGAP30	ENST00000368013.7	protein_coding	161069528,161059614,161056388,161054623,161054366,161053258,161052626,161052440,161052286,161051314,161049424,161046948	161069945,161059716,161056532,161054705,161054473,161053385,161052797,161052543,161052363,161051715,161049689,161049334	Gene ID= ENSG00000186517.13 TPM= 6.37 Transcript Type= protein_coding
chr1	161098361	161100298	161098361	161100298	+	ENST00000490724.6@KLHDC9	ENST00000490724.6	protein_coding	161098361,161098666,161099346,161099598,161100061	161098404,161099062,161099505,161099796,161100298	Gene ID= ENSG00000162755.13 TPM= 8.5 Transcript Type= processed_transcript
chr1	161098394	161100346	161098394	161100346	+	ENST00000368011.8@KLHDC9	ENST00000368011.8	protein_coding	161098394,161099346,161099598,161100061	161099062,161099505,161099796,161100346	Gene ID= ENSG00000162755.13 TPM= 4.25 Transcript Type= protein_coding
chr1	161100556	161118111	161100556	161118111	-	ENST00000368010.3@PFDN2	ENST00000368010.3	protein_coding	161117952,161102287,161102048,161100556	161118111,161102375,161102171,161100859	Gene ID= ENSG00000143256.4 TPM= 59.48 Transcript Type= protein_coding
chr1	161100556	161118055	161100556	161118055	-	ENST00000468311.1@PFDN2	ENST00000468311.1	protein_coding	161117952,161100556	161118055,161100859	Gene ID= ENSG00000143256.4 TPM= 3.19 Transcript Type= processed_transcript
chr1	161118094	161121067	161118094	161121067	+	transcript8147.chr1.nic@NIT1	transcript8147.chr1.nic	protein_coding	161118094,161118786,161119134,161119509,161119819,161120107,161120499	161118209,161118881,161119388,161119612,161119952,161120232,161121067	Gene ID= ENSG00000158793.13 TPM= 3.72 Transcript Type= NA
chr1	161118101	161121067	161118101	161121067	+	ENST00000368009.6@NIT1	ENST00000368009.6	protein_coding	161118101,161118786,161119134,161119509,161119819,161120107,161120499	161118178,161118881,161119388,161119612,161119952,161120232,161121067	Gene ID= ENSG00000158793.13 TPM= 28.15 Transcript Type= protein_coding
chr1	161118118	161121193	161118118	161121193	+	ENST00000392190.9@NIT1	ENST00000392190.9	protein_coding	161118118,161118786,161119134,161119509,161119819,161120107,161120499	161118225,161118881,161119388,161119612,161119952,161120232,161121193	Gene ID= ENSG00000158793.13 TPM= 1.06 Transcript Type= protein_coding
chr1	161118118	161125445	161118118	161125445	+	ENST00000368008.5@NIT1	ENST00000368008.5	protein_coding	161118118,161118786,161119134,161119509,161119819,161120107,161124141	161118178,161118881,161119388,161119612,161119952,161120232,161125445	Gene ID= ENSG00000158793.13 TPM= 2.12 Transcript Type= protein_coding
chr1	161120974	161132668	161120974	161132668	-	ENST00000368006.7@DEDD	ENST00000368006.7	protein_coding	161132551,161130815,161124138,161123839,161123075,161120974	161132668,161130847,161124526,161123946,161123221,161122523	Gene ID= ENSG00000158796.16 TPM= 5.31 Transcript Type= protein_coding
chr1	161120977	161132688	161120977	161132688	-	ENST00000545495.5@DEDD	ENST00000545495.5	protein_coding	161132551,161124138,161123839,161123075,161120977	161132688,161124526,161123946,161123221,161122523	Gene ID= ENSG00000158796.16 TPM= 4.25 Transcript Type= protein_coding
chr1	161132510	161133414	161132510	161133414	+	transcript8166.chr1.nnic@NA	transcript8166.chr1.nnic	NA	161132510	161133414	Gene ID= novel_gene_chr1_8167 TPM= 2.12 Transcript Type= NA
chr1	161153752	161158856	161153752	161158856	+	ENST00000368003.5@UFC1	ENST00000368003.5	protein_coding	161153752,161156950,161157254,161157617,161158121,161158412	161154120,161157017,161157317,161157693,161158211,161158856	Gene ID= ENSG00000143222.11 TPM= 65.85 Transcript Type= protein_coding
chr1	161159479	161165723	161159479	161165723	+	ENST00000289865.12@USP21	ENST00000289865.12	protein_coding	161159479,161160620,161162038,161162270,161162615,161162919,161163555,161163878,161164164,161164534,161164835,161165029,161165357	161159678,161161240,161162097,161162390,161162726,161163074,161163619,161163981,161164250,161164612,161164942,161165143,161165723	Gene ID= ENSG00000143258.15 TPM= 27.27 Transcript Type= protein_coding
chr1	161159501	161165723	161159501	161165723	+	transcript8177.chr1.nic@USP21	transcript8177.chr1.nic	protein_coding	161159501,161162038,161162270,161162615,161162919,161163555,161163878,161164835,161165029,161165357	161161240,161162097,161162390,161162726,161163074,161163619,161164612,161164942,161165143,161165723	Gene ID= ENSG00000143258.15 TPM= 2.12 Transcript Type= NA
chr1	161159501	161165723	161159501	161165723	+	transcript8178.chr1.nic@USP21	transcript8178.chr1.nic	protein_coding	161159501,161162038,161162270,161162615,161162919,161163555,161163878,161164835,161165029	161161240,161162097,161162390,161162726,161163074,161163619,161164612,161164942,161165723	Gene ID= ENSG00000143258.15 TPM= 2.12 Transcript Type= NA
chr1	161159464	161165714	161159464	161165714	+	ENST00000368002.7@USP21	ENST00000368002.7	protein_coding	161159464,161160366,161160620,161162038,161162270,161162615,161162919,161163555,161163878,161164164,161164534,161164835,161165029,161165357	161159678,161160506,161161240,161162097,161162390,161162726,161163074,161163619,161163981,161164250,161164612,161164942,161165143,161165714	Gene ID= ENSG00000143258.15 TPM= 6.02 Transcript Type= protein_coding
chr1	161159537	161165723	161159537	161165723	+	ENST00000368001.1@USP21	ENST00000368001.1	protein_coding	161159537,161160620,161162038,161162270,161162615,161162919,161163555,161163878,161164164,161164534,161164835,161165071,161165357	161159678,161161240,161162097,161162390,161162726,161163074,161163619,161163981,161164250,161164612,161164942,161165143,161165723	Gene ID= ENSG00000143258.15 TPM= 2.84 Transcript Type= protein_coding
chr1	161166410	161171218	161166410	161171218	+	ENST00000352210.9@PPOX	ENST00000352210.9	protein_coding	161166410,161166840,161167100,161167371,161167995,161168432,161168993,161169660,161169906,161170409,161170620,161170907,161171034	161166611,161166934,161167234,161167486,161168127,161168576,161169183,161169720,161170024,161170519,161170769,161170949,161171218	Gene ID= ENSG00000143224.17 TPM= 5.31 Transcript Type= protein_coding
chr1	161166415	161171216	161166415	161171216	+	ENST00000367999.8@PPOX	ENST00000367999.8	protein_coding	161166415,161166840,161167100,161167371,161167995,161168432,161168993,161169660,161169906,161170409,161170620,161170907,161171034	161166672,161166934,161167234,161167486,161168127,161168576,161169183,161169720,161170024,161170519,161170769,161170949,161171216	Gene ID= ENSG00000143224.17 TPM= 2.12 Transcript Type= protein_coding
chr1	161171311	161177968	161171311	161177968	-	ENST00000622395.4@B4GALT3	ENST00000622395.4	protein_coding	161177423,161176434,161175808,161174993,161173859,161173605,161172227,161171311	161177968,161176579,161176095,161175228,161174049,161173727,161172331,161172089	Gene ID= ENSG00000158850.14 TPM= 18.85 Transcript Type= protein_coding
chr1	161171310	161177508	161171310	161177508	-	transcript8199.chr1.nic@B4GALT3	transcript8199.chr1.nic	protein_coding	161177423,161175808,161174993,161173605,161172227,161171310	161177508,161176579,161175228,161174049,161172331,161172089	Gene ID= ENSG00000158850.14 TPM= 3.45 Transcript Type= NA
chr1	161171310	161177485	161171310	161177485	-	ENST00000319769.9@B4GALT3	ENST00000319769.9	protein_coding	161177423,161176434,161175808,161174993,161173859,161173605,161172227,161171310	161177485,161176579,161176074,161175228,161174049,161173727,161172331,161172089	Gene ID= ENSG00000158850.14 TPM= 32.66 Transcript Type= protein_coding
chr1	161184308	161199056	161184308	161199056	-	ENST00000367996.5@ADAMTS4	ENST00000367996.5	protein_coding	161197995,161196557,161196171,161195465,161193935,161193640,161193213,161192065,161184308	161199056,161196880,161196303,161195635,161194221,161193826,161193388,161192240,161191564	Gene ID= ENSG00000158859.9 TPM= 19.12 Transcript Type= protein_coding
chr1	161195979	161199053	161195979	161199053	-	ENST00000367995.3@ADAMTS4	ENST00000367995.3	protein_coding	161197995,161195979	161199053,161196880	Gene ID= ENSG00000158859.9 TPM= 1.06 Transcript Type= protein_coding
chr1	161201808	161214395	161201808	161214395	+	transcript8214.chr1.nic@NDUFS2	transcript8214.chr1.nic	protein_coding	161201808,161203437,161206407,161209193,161209483,161209857,161210111,161210304,161210591,161212351,161213380,161213649,161213864,161214156	161202480,161203543,161206597,161209313,161209595,161209931,161210188,161210389,161210710,161212480,161213475,161213732,161213921,161214395	Gene ID= ENSG00000158864.12 TPM= 625.67 Transcript Type= NA
chr1	161215297	161219248	161215297	161219248	+	ENST00000289902.1@FCER1G	ENST00000289902.1	protein_coding	161215297,161217986,161218241,161218703,161218881	161215370,161218077,161218276,161218723,161219248	Gene ID= ENSG00000158869.10 TPM= 11.68 Transcript Type= protein_coding
chr1	161226060	161230607	161226060	161230607	+	transcript8236.chr1.nic@TOMM40L	transcript8236.chr1.nic	protein_coding	161226060,161226476,161226888,161227258,161227636,161227884,161228186,161228428,161228715,161228956	161226136,161226604,161226955,161227350,161227737,161227989,161228308,161228504,161228817,161230607	Gene ID= ENSG00000158882.14 TPM= 2.47 Transcript Type= NA
chr1	161225939	161230744	161225939	161230744	+	ENST00000545897.5@TOMM40L	ENST00000545897.5	protein_coding	161225939,161226355,161226888,161227258,161227884,161228186,161228428,161228715,161228956	161226136,161226604,161226955,161227350,161227989,161228308,161228504,161228817,161230744	Gene ID= ENSG00000158882.14 TPM= 4.25 Transcript Type= protein_coding
chr1	161226061	161230607	161226061	161230607	+	transcript8242.chr1.nnic@TOMM40L	transcript8242.chr1.nnic	protein_coding	161226061,161226355,161227258,161227636,161227884,161228186,161228428,161228715,161228956	161226136,161226604,161227350,161227737,161227989,161228308,161228504,161228817,161230607	Gene ID= ENSG00000158882.14 TPM= 3.54 Transcript Type= NA
chr1	161226003	161230607	161226003	161230607	+	ENST00000367988.7@TOMM40L	ENST00000367988.7	protein_coding	161226003,161226355,161226888,161227258,161227636,161227884,161228186,161228428,161228715,161228956	161226136,161226604,161226955,161227350,161227737,161227989,161228308,161228504,161228817,161230607	Gene ID= ENSG00000158882.14 TPM= 18.41 Transcript Type= protein_coding
chr1	161230611	161233752	161230611	161233752	+	transcript8250.chr1.nnic@NA	transcript8250.chr1.nnic	NA	161230611	161233752	Gene ID= novel_gene_chr1_8251 TPM= 2.12 Transcript Type= NA
chr1	161314257	161375340	161314257	161375340	+	ENST00000367975.6@SDHC	ENST00000367975.6	protein_coding	161314257,161323614,161328396,161340594,161356677,161362329	161314425,161323670,161328497,161340655,161356840,161375340	Gene ID= ENSG00000143252.14 TPM= 15.93 Transcript Type= protein_coding
chr1	161314381	161363189	161314381	161363189	+	ENST00000342751.8@SDHC	ENST00000342751.8	protein_coding	161314381,161323614,161328396,161340594,161362329	161314425,161323670,161328497,161340655,161363189	Gene ID= ENSG00000143252.14 TPM= 10.62 Transcript Type= protein_coding
chr1	161364168	161368304	161364168	161368304	+	transcript8255.chr1.nnic@NA	transcript8255.chr1.nnic	NA	161364168	161368304	Gene ID= novel_gene_chr1_8256 TPM= 3.19 Transcript Type= NA
chr1	161422925	161424311	161422925	161424311	+	transcript8259.chr1.nnic@NA	transcript8259.chr1.nnic	NA	161422925	161424311	Gene ID= novel_gene_chr1_8260 TPM= 3.19 Transcript Type= NA
chr1	161505430	161519568	161505430	161519568	+	ENST00000271450.10@FCGR2A	ENST00000271450.10	protein_coding	161505430,161505987,161506334,161509820,161510834,161513895,161517975	161505552,161506007,161506591,161510074,161510956,161513932,161519568	Gene ID= ENSG00000143226.13 TPM= 4.25 Transcript Type= protein_coding
chr1	161505430	161518558	161505430	161518558	+	ENST00000367972.8@FCGR2A	ENST00000367972.8	protein_coding	161505430,161505987,161506337,161509820,161510834,161513895,161517975	161505552,161506007,161506591,161510074,161510956,161513932,161518558	Gene ID= ENSG00000143226.13 TPM= 2.12 Transcript Type= protein_coding
chr1	161524166	161526792	161524166	161526792	+	transcript8263.chr1.nnic@NA	transcript8263.chr1.nnic	NA	161524166	161526792	Gene ID= novel_gene_chr1_8264 TPM= 3.19 Transcript Type= NA
chr1	161623200	161631462	161623200	161631462	-	ENST00000294800.7@FCGR3B	ENST00000294800.7	protein_coding	161631055,161630368,161629778,161626145,161623200	161631462,161630388,161630035,161626402,161624639	Gene ID= ENSG00000162747.9 TPM= 6.37 Transcript Type= protein_coding
chr1	161663147	161678022	161663147	161678022	+	ENST00000236937.13@FCGR2B	ENST00000236937.13	protein_coding	161663147,161670252,161671392,161672975,161673960,161677328,161677476	161663353,161670272,161671649,161673229,161674073,161677365,161678022	Gene ID= ENSG00000072694.20 TPM= 1.06 Transcript Type= protein_coding
chr1	161725901	161728142	161725901	161728142	+	ENST00000495397.1@FCRLB	ENST00000495397.1	protein_coding	161725901,161727247	161726993,161728142	Gene ID= ENSG00000162746.14 TPM= 3.19 Transcript Type= processed_transcript
chr1	161749770	161757162	161749770	161757162	+	ENST00000367943.4@DUSP12	ENST00000367943.4	protein_coding	161749770,161751668,161751866,161752368,161753075,161756786	161750145,161751781,161751984,161752464,161753261,161757162	Gene ID= ENSG00000081721.11 TPM= 7.44 Transcript Type= protein_coding
chr1	161766294	161964070	161766294	161964070	+	ENST00000367942.3@ATF6	ENST00000367942.3	protein_coding	161766294,161778244,161781912,161783990,161791408,161792124,161802052,161819633,161821070,161846449,161851722,161853224,161860207,161863198,161912296,161958446	161766442,161778320,161781999,161784096,161791537,161792327,161802272,161819818,161821161,161846580,161851835,161853323,161860277,161863312,161912380,161964070	Gene ID= ENSG00000118217.5 TPM= 6.37 Transcript Type= protein_coding
chr1	161940561	161943691	161940561	161943691	-	transcript8283.chr1.nnic@NA	transcript8283.chr1.nnic	NA	161940561	161943691	Gene ID= novel_gene_chr1_8284 TPM= 2.12 Transcript Type= NA
chr1	161983192	162023854	161983192	162023854	-	ENST00000294794.7@OLFML2B	ENST00000294794.7	protein_coding	162023257,162019919,162017400,162006297,162000113,161997825,161984804,161983192	162023854,162020182,162017507,162006473,162000338,161998349,161984980,161984276	Gene ID= ENSG00000162745.10 TPM= 3.19 Transcript Type= protein_coding
chr1	162069774	162368451	162069774	162368451	+	ENST00000530878.5@NOS1AP	ENST00000530878.5	protein_coding	162069774,162154405,162287344,162300648,162333017,162343835,162355187,162356960,162365404,162367052	162070282,162154476,162287436,162300706,162333125,162343976,162355353,162357136,162365569,162368451	Gene ID= ENSG00000198929.12 TPM= 2.12 Transcript Type= protein_coding
chr1	162395266	162412126	162395266	162412126	-	ENST00000367929.2@SH2D1B	ENST00000367929.2	protein_coding	162411883,162402739,162398923,162395266	162412126,162402802,162399087,162397315	Gene ID= ENSG00000198574.5 TPM= 1.06 Transcript Type= protein_coding
chr1	162561506	162599842	162561506	162599842	+	ENST00000271469.7@UAP1	ENST00000271469.7	protein_coding	162561506,162566012,162576777,162579428,162581287,162587475,162588693,162590323,162592732,162597792,162599271	162561777,162566348,162576981,162579603,162581459,162587668,162588833,162590511,162592782,162597858,162599842	Gene ID= ENSG00000117143.13 TPM= 36.11 Transcript Type= protein_coding
chr1	162561533	162599837	162561533	162599837	+	ENST00000367926.8@UAP1	ENST00000367926.8	protein_coding	162561533,162566012,162576777,162579428,162581287,162587475,162588693,162590323,162597792,162599271	162561777,162566348,162576981,162579603,162581459,162587668,162588833,162590511,162597858,162599837	Gene ID= ENSG00000117143.13 TPM= 1.06 Transcript Type= protein_coding
chr1	162631372	162784317	162631372	162784317	+	transcript8302.chr1.nic@DDR2	transcript8302.chr1.nic	protein_coding	162631372,162655211,162719037,162753095,162754624,162755156,162755664,162759796,162761211,162766001,162767229,162770302,162772024,162773469,162775652,162776136,162778580,162780112	162631447,162655374,162719145,162753197,162754855,162755303,162755769,162759979,162761454,162766063,162767359,162770512,162772247,162773596,162775843,162776370,162778729,162784317	Gene ID= ENSG00000162733.16 TPM= 11.68 Transcript Type= NA
chr1	162632470	162780421	162632470	162780421	+	ENST00000367921.7@DDR2	ENST00000367921.7	protein_coding	162632470,162655211,162719037,162753095,162754624,162755156,162755664,162759796,162761211,162766001,162767229,162770302,162772024,162773469,162775652,162776136,162778580,162780112	162632631,162655374,162719145,162753197,162754855,162755303,162755769,162759979,162761454,162766063,162767359,162770512,162772247,162773596,162775843,162776370,162778729,162780421	Gene ID= ENSG00000162733.16 TPM= 1.06 Transcript Type= protein_coding
chr1	163068775	163076802	163068775	163076802	+	ENST00000421743.6@RGS4	ENST00000421743.6	protein_coding	163068775,163069252,163072395,163072805,163073456,163074321	163068992,163069528,163072499,163072866,163073622,163076802	Gene ID= ENSG00000117152.13 TPM= 2.12 Transcript Type= protein_coding
chr1	164588475	164588844	164588475	164588844	-	transcript8317.chr1.nnic@NA	transcript8317.chr1.nnic	NA	164588475	164588844	Gene ID= novel_gene_chr1_8318 TPM= 4.25 Transcript Type= NA
chr1	165630861	165655620	165630861	165655620	+	ENST00000367889.7@MGST3	ENST00000367889.7	protein_coding	165630861,165649841,165651014,165651978,165654279,165655368	165631293,165649964,165651087,165652035,165654351,165655620	Gene ID= ENSG00000143198.12 TPM= 674.03 Transcript Type= protein_coding
chr1	165631239	165655617	165631239	165655617	+	ENST00000495447.5@MGST3	ENST00000495447.5	protein_coding	165631239,165649755,165651014,165651978,165654279,165655368	165631293,165649964,165651087,165652035,165654351,165655617	Gene ID= ENSG00000143198.12 TPM= 15.85 Transcript Type= retained_intron
chr1	165648792	165651892	165648792	165651892	+	ENST00000609263.1@MGST3	ENST00000609263.1	protein_coding	165648792	165651892	Gene ID= ENSG00000143198.12 TPM= 4.25 Transcript Type= retained_intron
chr1	165631240	165655620	165631240	165655620	+	ENST00000367885.5@MGST3	ENST00000367885.5	protein_coding	165631240,165632231,165649841,165651014,165651978,165654279,165655368	165631293,165632274,165649964,165651087,165652035,165654351,165655620	Gene ID= ENSG00000143198.12 TPM= 43.1 Transcript Type= protein_coding
chr1	165662216	165698863	165662216	165698863	-	ENST00000354775.4@ALDH9A1	ENST00000354775.4	protein_coding	165698378,165695252,165682981,165682107,165680487,165679442,165669262,165668926,165667309,165665018,165662216	165698863,165695397,165683110,165682241,165680683,165679582,165669450,165669013,165667450,165665130,165663144	Gene ID= ENSG00000143149.12 TPM= 122.15 Transcript Type= protein_coding
chr1	165727538	165768876	165727538	165768876	-	ENST00000464650.5@TMCO1	ENST00000464650.5	protein_coding	165768759,165768192,165759525,165754228,165752102,165743167,165727538	165768876,165768269,165759584,165754274,165752169,165743311,165728121	Gene ID= ENSG00000143183.16 TPM= 4.25 Transcript Type= protein_coding
chr1	165759540	165768897	165759540	165768897	-	transcript8346.chr1.nic@TMCO1	transcript8346.chr1.nic	protein_coding	165768682,165768192,165759540	165768897,165768269,165759584	Gene ID= ENSG00000143183.16 TPM= 2.12 Transcript Type= NA
chr1	165902595	165911618	165902595	165911618	+	ENST00000479872.5@UCK2	ENST00000479872.5	protein_coding	165902595,165905921,165907684	165903279,165905969,165911618	Gene ID= ENSG00000143179.14 TPM= 30.8 Transcript Type= retained_intron
chr1	165827531	165908109	165827531	165908109	+	ENST00000367879.8@UCK2	ENST00000367879.8	protein_coding	165827531,165890204,165891226,165896190,165903182,165905921,165907684	165827932,165890363,165891322,165896332,165903279,165905969,165908109	Gene ID= ENSG00000143179.14 TPM= 14.87 Transcript Type= protein_coding
chr1	165895570	165908074	165895570	165908074	+	ENST00000469256.6@UCK2	ENST00000469256.6	protein_coding	165895570,165896190,165903182,165905921,165907684	165895641,165896332,165903279,165905969,165908074	Gene ID= ENSG00000143179.14 TPM= 1.06 Transcript Type= protein_coding
chr1	165899702	165901963	165899702	165901963	+	transcript8357.chr1.nnic@NA	transcript8357.chr1.nnic	NA	165899702	165901963	Gene ID= novel_gene_chr1_8358 TPM= 2.12 Transcript Type= NA
chr1	166839433	166854471	166839433	166854471	+	transcript8361.chr1.nic@POGK	transcript8361.chr1.nic	protein_coding	166839433,166840955,166846612,166847494,166848938,166852585	166839769,166841088,166846738,166847592,166850423,166854471	Gene ID= ENSG00000143157.11 TPM= 9.03 Transcript Type= NA
chr1	166839457	166856344	166839457	166856344	+	ENST00000367876.8@POGK	ENST00000367876.8	protein_coding	166839457,166840955,166846612,166847494,166848938,166852585	166839604,166841088,166846738,166847592,166850423,166856344	Gene ID= ENSG00000143157.11 TPM= 5.84 Transcript Type= protein_coding
chr1	166839525	166842015	166839525	166842015	+	transcript8366.chr1.nnic@NA	transcript8366.chr1.nnic	NA	166839525	166842015	Gene ID= novel_gene_chr1_8367 TPM= 2.12 Transcript Type= NA
chr1	166856510	166876327	166856510	166876327	-	ENST00000367874.4@TADA1	ENST00000367874.4	protein_coding	166876160,166869763,166869445,166863824,166862203,166860186,166858119,166856510	166876327,166869854,166869510,166863921,166862412,166860337,166858281,166857719	Gene ID= ENSG00000152382.5 TPM= 30.8 Transcript Type= protein_coding
chr1	166933623	166975464	166933623	166975464	-	transcript8379.chr1.nnic@ILDR2	transcript8379.chr1.nnic	protein_coding	166975223,166957769,166956733,166939514,166936591,166935301,166933623	166975464,166958101,166956852,166939570,166936737,166935477,166933885	Gene ID= ENSG00000143195.12 TPM= 2.12 Transcript Type= NA
chr1	166956216	166975626	166956216	166975626	-	transcript8383.chr1.nnic@ILDR2	transcript8383.chr1.nnic	protein_coding	166975223,166957769,166956733,166956216	166975626,166958101,166956852,166956406	Gene ID= ENSG00000143195.12 TPM= 2.12 Transcript Type= NA
chr1	166913203	166917942	166913203	166917942	-	transcript8384.chr1.nnic@NA	transcript8384.chr1.nnic	NA	166913203	166917942	Gene ID= novel_gene_chr1_8385 TPM= 7.44 Transcript Type= NA
chr1	166920895	166973503	166920895	166973503	+	transcript8381.chr1.nnic@NA	transcript8381.chr1.nnic	NA	166920895,166927467,166970785,166972271,166972986	166921432,166927607,166970863,166972470,166973503	Gene ID= novel_gene_chr1_8382 TPM= 2.12 Transcript Type= NA
chr1	167052836	167092792	167052836	167092792	-	transcript8386.chr1.nnic@GPA33	transcript8386.chr1.nnic	protein_coding	167092693,167073385,167068922,167063582,167055730,167054976,167052836	167092792,167073539,167069138,167063737,167055849,167055111,167054466	Gene ID= ENSG00000143167.11 TPM= 4.25 Transcript Type= NA
chr1	167094071	167129130	167094071	167129130	+	transcript8396.chr1.nnic@DUSP27	transcript8396.chr1.nnic	protein_coding	167094071,167094834,167113710,167117328,167119249,167125787,167128727	167094194,167094959,167113804,167117559,167119466,167126322,167129130	Gene ID= ENSG00000198842.9 TPM= 42.49 Transcript Type= NA
chr1	167094015	167129129	167094015	167129129	+	transcript8407.chr1.nnic@DUSP27	transcript8407.chr1.nnic	protein_coding	167094015,167113710,167117328,167119249,167125787	167094194,167113804,167117559,167119466,167129129	Gene ID= ENSG00000198842.9 TPM= 105.77 Transcript Type= NA
chr1	167094045	167129129	167094045	167129129	+	ENST00000361200.6@DUSP27	ENST00000361200.6	protein_coding	167094045,167094834,167113710,167117328,167119249,167125787	167094194,167094959,167113804,167117559,167119466,167129129	Gene ID= ENSG00000198842.9 TPM= 566.75 Transcript Type= protein_coding
chr1	167220829	167427345	167220829	167427345	+	ENST00000367866.6@POU2F1	ENST00000367866.6	protein_coding	167220829,167332470,167365467,167370161,167371917,167374108,167376029,167383857,167389588,167396286,167397994,167399186,167401451,167411959,167413026,167415500	167220958,167332535,167365567,167370214,167372036,167374296,167376155,167383951,167389761,167396427,167398133,167399365,167401556,167412304,167413114,167427345	Gene ID= ENSG00000143190.21 TPM= 3.19 Transcript Type= protein_coding
chr1	167221574	167416106	167221574	167416106	+	transcript8431.chr1.nnic@POU2F1	transcript8431.chr1.nnic	protein_coding	167221574,167332470,167365467,167370161,167371917,167374108,167376029,167383857,167389588,167396286,167397994,167399186,167401451,167411959,167413026,167415500	167221737,167332535,167365567,167370214,167372036,167374296,167376155,167383951,167389761,167396427,167398133,167399365,167401556,167412304,167413114,167416106	Gene ID= ENSG00000143190.21 TPM= 2.12 Transcript Type= NA
chr1	167541013	167553767	167541013	167553767	-	ENST00000370509.4@CREG1	ENST00000370509.4	protein_coding	167553388,167548002,167546101,167541013	167553767,167548121,167546285,167542301	Gene ID= ENSG00000143162.7 TPM= 228.36 Transcript Type= protein_coding
chr1	167630093	167706249	167630093	167706249	+	ENST00000367854.7@RCSD1	ENST00000367854.7	protein_coding	167630093,167683900,167685421,167690049,167694099,167697099,167704664	167630429,167684001,167685510,167690120,167694302,167697842,167706249	Gene ID= ENSG00000198771.10 TPM= 50.98 Transcript Type= protein_coding
chr1	167630253	167706242	167630253	167706242	+	transcript8443.chr1.nnic@RCSD1	transcript8443.chr1.nnic	protein_coding	167630253,167683900,167685421,167690049,167694099,167697099,167704750	167630429,167684001,167685510,167690120,167694302,167697842,167706242	Gene ID= ENSG00000198771.10 TPM= 4.25 Transcript Type= NA
chr1	167630093	167706248	167630093	167706248	+	ENST00000537350.5@RCSD1	ENST00000537350.5	protein_coding	167630093,167683900,167690049,167694099,167697099,167704664	167630429,167684001,167690120,167694302,167697842,167706248	Gene ID= ENSG00000198771.10 TPM= 8.5 Transcript Type= protein_coding
chr1	167704718	167708687	167704718	167708687	+	transcript8447.chr1.nnic@NA	transcript8447.chr1.nnic	NA	167704718	167708687	Gene ID= novel_gene_chr1_8448 TPM= 7.44 Transcript Type= NA
chr1	167721950	167791919	167721950	167791919	+	ENST00000359523.6@MPZL1	ENST00000359523.6	protein_coding	167721950,167765583,167772275,167773236,167776064,167787820	167722242,167765749,167772488,167773368,167776166,167791919	Gene ID= ENSG00000197965.11 TPM= 12.21 Transcript Type= protein_coding
chr1	167721990	167788152	167721990	167788152	+	transcript8459.chr1.nnic@MPZL1	transcript8459.chr1.nnic	protein_coding	167721990,167772275,167773236,167776064,167787820	167722242,167772488,167773368,167776166,167788152	Gene ID= ENSG00000197965.11 TPM= 2.12 Transcript Type= NA
chr1	167721989	167790819	167721989	167790819	+	ENST00000392121.7@MPZL1	ENST00000392121.7	protein_coding	167721989,167765583,167787820	167722242,167765749,167790819	Gene ID= ENSG00000197965.11 TPM= 15.4 Transcript Type= protein_coding
chr1	167767794	167771484	167767794	167771484	-	transcript8463.chr1.nnic@NA	transcript8463.chr1.nnic	NA	167767794	167771484	Gene ID= novel_gene_chr1_8464 TPM= 8.5 Transcript Type= NA
chr1	167916729	167936040	167916729	167936040	-	ENST00000367846.8@MPC2	ENST00000367846.8	protein_coding	167935733,167924497,167920547,167919979,167916729	167936040,167924537,167920631,167920090,167918359	Gene ID= ENSG00000143158.10 TPM= 72.23 Transcript Type= protein_coding
chr1	167936585	168075834	167936585	168075834	+	transcript8478.chr1.nic@DCAF6	transcript8478.chr1.nic	protein_coding	167936585,167951800,167966629,167974830,167987495,167991204,167993226,168002482,168003870,168004533,168015781,168022988,168038371,168043025,168044585,168044900,168063621,168065590,168066377,168068358,168075371	167937008,167951861,167966721,167975015,167987608,167991339,167993440,168002575,168003989,168004793,168015951,168023047,168038488,168043140,168044671,168045227,168063759,168065746,168066465,168068463,168075834	Gene ID= ENSG00000143164.15 TPM= 108.14 Transcript Type= NA
chr1	167936585	168075834	167936585	168075834	+	transcript8480.chr1.nic@DCAF6	transcript8480.chr1.nic	protein_coding	167936585,167951800,167966629,167974830,167987495,167991204,167993226,168002482,168003870,168004533,168022988,168038371,168043025,168044585,168044900,168050892,168063621,168065590,168066377,168068358,168075371	167937008,167951861,167966721,167975015,167987608,167991339,167993440,168002575,168003989,168004793,168023047,168038488,168043140,168044671,168045227,168050933,168063759,168065746,168066465,168068463,168075834	Gene ID= ENSG00000143164.15 TPM= 12.86 Transcript Type= NA
chr1	167936657	168075834	167936657	168075834	+	transcript8487.chr1.nic@DCAF6	transcript8487.chr1.nic	protein_coding	167936657,167951800,167966629,167974830,167987495,167991204,167993226,168002482,168003870,168004533,168038371,168043025,168044585,168044900,168050892,168063621,168065590,168066377,168068358,168075371	167937008,167951861,167966721,167975015,167987608,167991339,167993440,168002575,168003989,168004793,168038488,168043140,168044671,168045227,168050933,168063759,168065746,168066465,168068463,168075834	Gene ID= ENSG00000143164.15 TPM= 10.21 Transcript Type= NA
chr1	167936585	168063659	167936585	168063659	+	transcript8497.chr1.nic@DCAF6	transcript8497.chr1.nic	protein_coding	167936585,167951800,167966629,167974830,167987495,167991204,167993226,168002482,168003870,168004533,168015781,168022988,168038371,168043025,168044585,168044900,168050892,168063621	167937008,167951861,167966721,167975015,167987608,167991339,167993440,168002575,168003989,168004793,168015951,168023047,168038488,168043140,168044671,168045227,168050933,168063659	Gene ID= ENSG00000143164.15 TPM= 19.12 Transcript Type= NA
chr1	167936644	168063658	167936644	168063658	+	transcript8507.chr1.nic@DCAF6	transcript8507.chr1.nic	protein_coding	167936644,167951800,167966629,167974830,167987495,167991204,167993226,168002482,168003870,168004533,168022988,168038371,168043025,168044585,168044900,168063621	167937008,167951861,167966721,167975015,167987608,167991339,167993440,168002575,168003989,168004793,168023047,168038488,168043140,168044671,168045227,168063658	Gene ID= ENSG00000143164.15 TPM= 13.43 Transcript Type= NA
chr1	167936661	168075843	167936661	168075843	+	ENST00000367843.7@DCAF6	ENST00000367843.7	protein_coding	167936661,167951800,167966629,167974830,167987495,167991204,167993226,168002482,168003870,168004533,168022988,168038371,168043025,168044585,168044900,168063621,168065590,168066377,168068358,168075371	167937008,167951861,167966721,167975015,167987608,167991339,167993440,168002575,168003989,168004793,168023047,168038488,168043140,168044671,168045227,168063759,168065746,168066465,168068463,168075843	Gene ID= ENSG00000143164.15 TPM= 55.95 Transcript Type= protein_coding
chr1	167936708	168075834	167936708	168075834	+	ENST00000312263.10@DCAF6	ENST00000312263.10	protein_coding	167936708,167951800,167966629,167974830,167987495,167991204,167993226,168002482,168003870,168004533,168038371,168043025,168044585,168044900,168063621,168065590,168066377,168068358,168075371	167937008,167951861,167966721,167975015,167987608,167991339,167993440,168002575,168003989,168004793,168038488,168043140,168044671,168045227,168063759,168065746,168066465,168068463,168075834	Gene ID= ENSG00000143164.15 TPM= 34.92 Transcript Type= protein_coding
chr1	167980135	167980771	167980135	167980771	-	transcript8518.chr1.nnic@NA	transcript8518.chr1.nnic	NA	167980135	167980771	Gene ID= novel_gene_chr1_8519 TPM= 2.12 Transcript Type= NA
chr1	168011921	168014616	168011921	168014616	-	transcript8516.chr1.nnic@NA	transcript8516.chr1.nnic	NA	168011921	168014616	Gene ID= novel_gene_chr1_8517 TPM= 5.31 Transcript Type= NA
chr1	168085266	168136998	168085266	168136998	-	transcript8524.chr1.nnic@GPR161	transcript8524.chr1.nnic	protein_coding	168136739,168104477,168096508,168090564,168087585,168085266	168136998,168104894,168097232,168090668,168087704,168085796	Gene ID= ENSG00000143147.14 TPM= 3.19 Transcript Type= NA
chr1	168178901	168202108	168178901	168202108	+	transcript8526.chr1.nnic@TIPRL	transcript8526.chr1.nnic	protein_coding	168178901,168183902,168184779,168191369,168196547,168198919,168199903,168201777	168179181,168184081,168184878,168191500,168196642,168198981,168200704,168202108	Gene ID= ENSG00000143155.12 TPM= 10.62 Transcript Type= NA
chr1	168178976	168200198	168178976	168200198	+	transcript8527.chr1.nnic@TIPRL	transcript8527.chr1.nnic	protein_coding	168178976,168183902,168184779,168191369,168196547,168198919,168199225	168179181,168184081,168184878,168191500,168196642,168198981,168200198	Gene ID= ENSG00000143155.12 TPM= 2.12 Transcript Type= NA
chr1	168178933	168202114	168178933	168202114	+	ENST00000367833.6@TIPRL	ENST00000367833.6	protein_coding	168178933,168183902,168184779,168191369,168196547,168198919,168199903	168179181,168184081,168184878,168191500,168196642,168198981,168202114	Gene ID= ENSG00000143155.12 TPM= 8.5 Transcript Type= protein_coding
chr1	168245565	168247343	168245565	168247343	-	ENST00000358576.4@ANKRD36BP1	ENST00000358576.4	transcribed_processed_pseudogene	168245565	168247343	Gene ID= ENSG00000214262.4 TPM= 138.08 Transcript Type= processed_transcript
chr1	168695459	168729264	168695459	168729264	-	ENST00000367817.3@DPT	ENST00000367817.3	protein_coding	168728870,168714221,168701017,168695459	168729264,168714346,168701124,168696615	Gene ID= ENSG00000143196.4 TPM= 77.54 Transcript Type= protein_coding
chr1	169106323	169132019	169106323	169132019	+	ENST00000367815.8@ATP1B1	ENST00000367815.8	protein_coding	169106323,169111370,169124884,169127224,169130010,169131292	169106926,169111498,169125039,169127408,169130090,169132019	Gene ID= ENSG00000143153.12 TPM= 52.05 Transcript Type= protein_coding
chr1	169107760	169108854	169107760	169108854	-	transcript8553.chr1.nnic@NA	transcript8553.chr1.nnic	NA	169107760	169108854	Gene ID= novel_gene_chr1_8554 TPM= 3.19 Transcript Type= NA
chr1	169131790	169132567	169131790	169132567	+	transcript8551.chr1.nnic@NA	transcript8551.chr1.nnic	NA	169131790	169132567	Gene ID= novel_gene_chr1_8552 TPM= 2.12 Transcript Type= NA
chr1	169132531	169367946	169132531	169367946	-	ENST00000472647.5@NME7	ENST00000472647.5	protein_coding	169367708,169324393,169323117,169309970,169303145,169298556,169287303,169237623,169235131,169230718,169169447,169132531	169367946,169324469,169323283,169310080,169303195,169298763,169287408,169237687,169235199,169230819,169169554,169132817	Gene ID= ENSG00000143156.13 TPM= 1.06 Transcript Type= protein_coding
chr1	169132531	169367967	169132531	169367967	-	ENST00000367811.7@NME7	ENST00000367811.7	protein_coding	169367708,169324393,169323117,169309970,169303145,169298556,169287303,169237623,169235131,169230718,169169447,169132531	169367967,169324500,169323283,169310080,169303195,169298763,169287408,169237687,169235199,169230819,169169554,169132817	Gene ID= ENSG00000143156.13 TPM= 11.68 Transcript Type= protein_coding
chr1	169367970	169396540	169367970	169396540	+	ENST00000329281.6@BLZF1	ENST00000329281.6	protein_coding	169367970,169369473,169376540,169378330,169380481,169382062,169386997,169395894	169368342,169369550,169376979,169378529,169380609,169382281,169387209,169396540	Gene ID= ENSG00000117475.13 TPM= 1.06 Transcript Type= protein_coding
chr1	169367970	169388305	169367970	169388305	+	ENST00000367808.7@BLZF1	ENST00000367808.7	protein_coding	169367970,169369473,169376540,169378330,169380481,169382062,169386997	169368342,169369550,169376979,169378529,169380609,169382281,169388305	Gene ID= ENSG00000117475.13 TPM= 23.37 Transcript Type= protein_coding
chr1	169367969	169388303	169367969	169388303	+	transcript8562.chr1.nnic@BLZF1	transcript8562.chr1.nnic	protein_coding	169367969,169369473,169376540,169378330,169380481,169386997	169368342,169369550,169376979,169378529,169380609,169388303	Gene ID= ENSG00000117475.13 TPM= 11.68 Transcript Type= NA
chr1	169368201	169382852	169368201	169382852	+	transcript8566.chr1.nic@BLZF1	transcript8566.chr1.nic	protein_coding	169368201,169369473,169376540,169378330,169380481	169368342,169369550,169376979,169378529,169382852	Gene ID= ENSG00000117475.13 TPM= 4.25 Transcript Type= NA
chr1	169421363	169427462	169421363	169427462	-	ENST00000456107.1@CCDC181	ENST00000456107.1	protein_coding	169427288,169424811,169421363	169427462,169424930,169422313	Gene ID= ENSG00000117477.12 TPM= 1.06 Transcript Type= protein_coding
chr1	169463909	169486003	169463909	169486003	-	ENST00000236137.9@SLC19A2	ENST00000236137.9	protein_coding	169485563,169477155,169469964,169468644,169468111,169463909	169486003,169477757,169470186,169468836,169468252,169465977	Gene ID= ENSG00000117479.12 TPM= 8.5 Transcript Type= protein_coding
chr1	169590147	169630193	169590147	169630193	-	ENST00000367788.6@SELP	ENST00000367788.6	protein_coding	169630072,169619129,169617028,169613586,169612929,169611492,169609504,169606949,169603026,169596991,169595925,169594692,169593605,169591426,169590147	169630193,169619219,169617414,169613693,169613114,169611677,169609689,169607134,169603211,169597176,169596134,169594877,169593724,169591456,169590202	Gene ID= ENSG00000174175.16 TPM= 1.06 Transcript Type= protein_coding
chr1	169588852	169630112	169588852	169630112	-	ENST00000263686.10@SELP	ENST00000263686.10	protein_coding	169630072,169619129,169617028,169613586,169612929,169612217,169611492,169609504,169606949,169603026,169596991,169595925,169594692,169593605,169591426,169590147,169588852	169630112,169619219,169617414,169613693,169613114,169612402,169611677,169609689,169607134,169603211,169597176,169596134,169594877,169593724,169591456,169590202,169589461	Gene ID= ENSG00000174175.16 TPM= 4.25 Transcript Type= protein_coding
chr1	169690667	169711698	169690667	169711698	-	ENST00000236147.4@SELL	ENST00000236147.4	protein_coding	169711496,169710436,169708417,169707342,169704568,169703255,169701560,169696535,169690667	169711698,169710517,169708803,169707449,169704753,169703440,169701688,169696553,169691802	Gene ID= ENSG00000188404.8 TPM= 5.31 Transcript Type= protein_coding
chr1	169722641	169728411	169722641	169728411	-	transcript8581.chr1.nic@SELE	transcript8581.chr1.nic	protein_coding	169728058,169727739,169727349,169726699,169725907,169725729,169722641	169728411,169727927,169727525,169726806,169725928,169725801,169724509	Gene ID= ENSG00000007908.15 TPM= 4.25 Transcript Type= NA
chr1	169722641	169734062	169722641	169734062	-	ENST00000333360.11@SELE	ENST00000333360.11	protein_coding	169733971,169733576,169732615,169731835,169730432,169729488,169729186,169728058,169727739,169727349,169726699,169725907,169725729,169722641	169734062,169733660,169732998,169731942,169730617,169729673,169729374,169728246,169727927,169727525,169726806,169725928,169725801,169724509	Gene ID= ENSG00000007908.15 TPM= 8.5 Transcript Type= protein_coding
chr1	169792529	169794966	169792529	169794966	-	ENST00000310392.4@METTL18	ENST00000310392.4	protein_coding	169794815,169792529	169794966,169793897	Gene ID= ENSG00000171806.11 TPM= 3.19 Transcript Type= protein_coding
chr1	169849631	169893952	169849631	169893952	-	ENST00000367771.10@SCYL3	ENST00000367771.10	protein_coding	169893788,169888676,169878634,169875978,169873696,169870255,169868928,169866896,169864369,169862613,169859041,169854270,169849631	169893952,169888890,169878819,169876091,169873752,169870357,169869039,169866973,169864508,169862797,169859212,169854964,169853772	Gene ID= ENSG00000000457.13 TPM= 3.19 Transcript Type= protein_coding
chr1	169921333	170074710	169921333	170074710	-	transcript8593.chr1.nnic@KIFAP3	transcript8593.chr1.nnic	protein_coding	170074436,170055305,170046712,170039233,170038290,170035454,170034372,170031886,170024418,170016462,169992155,169984582,169983270,169982702,169981972,169978085,169972513,169961046,169954011,169923066,169921333	170074710,170055436,170046866,170039288,170038431,170035553,170034496,170031984,170024596,170016624,169992255,169984690,169983382,169982867,169982097,169978183,169972598,169961235,169954110,169923102,169921781	Gene ID= ENSG00000075945.12 TPM= 26.77 Transcript Type= NA
chr1	169921333	170074672	169921333	170074672	-	transcript8594.chr1.nnic@KIFAP3	transcript8594.chr1.nnic	protein_coding	170074436,170055305,170046712,170039233,170038290,170035454,170034372,170031886,170024418,170016462,169992155,169984582,169983270,169982702,169981972,169978085,169972513,169961046,169954011,169925787,169921333	170074672,170055436,170046866,170039288,170038431,170035553,170034496,170031984,170024596,170016624,169992255,169984690,169983382,169982867,169982097,169978183,169972598,169961235,169954110,169925855,169921781	Gene ID= ENSG00000075945.12 TPM= 4.46 Transcript Type= NA
chr1	169921326	170074588	169921326	170074588	-	ENST00000367767.5@KIFAP3	ENST00000367767.5	protein_coding	170074436,170046712,170039233,170038290,170035454,170034372,170031886,170024418,170016462,169992155,169984582,169983270,169982702,169981972,169978085,169972513,169961046,169954011,169921326	170074588,170046866,170039288,170038431,170035553,170034496,170031984,170024596,170016624,169992255,169984690,169983382,169982867,169982097,169978183,169972598,169961235,169954110,169921781	Gene ID= ENSG00000075945.12 TPM= 4.46 Transcript Type= protein_coding
chr1	169921326	170074695	169921326	170074695	-	ENST00000361580.6@KIFAP3	ENST00000361580.6	protein_coding	170074436,170055305,170046712,170039233,170038290,170035454,170034372,170031886,170024418,170016462,169992155,169984582,169983270,169982702,169981972,169978085,169972513,169961046,169954011,169921326	170074695,170055436,170046866,170039288,170038431,170035553,170034496,170031984,170024596,170016624,169992255,169984690,169983382,169982867,169982097,169978183,169972598,169961235,169954110,169921781	Gene ID= ENSG00000075945.12 TPM= 84.12 Transcript Type= protein_coding
chr1	170532146	170553834	170532146	170553834	+	transcript8614.chr1.nnic@GORAB	transcript8614.chr1.nnic	protein_coding	170532146,170533464,170539210,170542491,170544705,170552015	170532284,170533651,170539567,170542592,170544845,170553834	Gene ID= ENSG00000120370.12 TPM= 2.12 Transcript Type= NA
chr1	170532129	170553446	170532129	170553446	+	ENST00000367763.7@GORAB	ENST00000367763.7	protein_coding	170532129,170539210,170542491,170544705,170552015	170532284,170539567,170542592,170544845,170553446	Gene ID= ENSG00000120370.12 TPM= 10.62 Transcript Type= protein_coding
chr1	170532133	170553446	170532133	170553446	+	transcript8619.chr1.nnic@GORAB	transcript8619.chr1.nnic	protein_coding	170532133,170539210,170542491,170544705,170552015	170532233,170539567,170542592,170544845,170553446	Gene ID= ENSG00000120370.12 TPM= 2.12 Transcript Type= NA
chr1	170532151	170553446	170532151	170553446	+	ENST00000498166.5@GORAB	ENST00000498166.5	protein_coding	170532151,170533464,170536310,170539210,170542491,170544705,170552015	170532284,170533651,170536421,170539567,170542592,170544845,170553446	Gene ID= ENSG00000120370.12 TPM= 1.06 Transcript Type= nonsense_mediated_decay
chr1	170663627	170739400	170663627	170739400	+	transcript8632.chr1.nnic@PRRX1	transcript8632.chr1.nnic	protein_coding	170663627,170719726,170736048	170664459,170719901,170739400	Gene ID= ENSG00000116132.11 TPM= 13.81 Transcript Type= NA
chr1	170663134	170736508	170663134	170736508	+	ENST00000367760.7@PRRX1	ENST00000367760.7	protein_coding	170663134,170719726,170726220,170730277,170736048	170664459,170719901,170726401,170730348,170736508	Gene ID= ENSG00000116132.11 TPM= 18.06 Transcript Type= protein_coding
chr1	170663906	170739419	170663906	170739419	+	ENST00000239461.10@PRRX1	ENST00000239461.10	protein_coding	170663906,170719726,170726220,170736048	170664459,170719901,170726401,170739419	Gene ID= ENSG00000116132.11 TPM= 64.79 Transcript Type= protein_coding
chr1	170663446	170666109	170663446	170666109	+	transcript8636.chr1.nnic@NA	transcript8636.chr1.nnic	NA	170663446	170666109	Gene ID= novel_gene_chr1_8637 TPM= 15.93 Transcript Type= NA
chr1	171090877	171117819	171090877	171117819	+	ENST00000367755.8@FMO3	ENST00000367755.8	protein_coding	171090877,171092653,171103785,171107675,171108079,171110798,171114007,171116208,171117100	171090981,171092790,171103973,171107837,171108221,171110997,171114362,171116280,171117819	Gene ID= ENSG00000007933.12 TPM= 1.06 Transcript Type= protein_coding
chr1	171185204	171211230	171185204	171211230	+	transcript8643.chr1.nnic@FMO2	transcript8643.chr1.nnic	protein_coding	171185204,171185708,171193335,171196649,171199346,171203865,171205279,171207718,171208794,171210800	171185359,171185845,171193523,171196811,171199488,171204064,171205634,171207790,171210717,171211230	Gene ID= ENSG00000094963.13 TPM= 4.25 Transcript Type= NA
chr1	171185208	171211230	171185208	171211230	+	ENST00000209929.9@FMO2	ENST00000209929.9	protein_coding	171185208,171185708,171193335,171196649,171199346,171203865,171205279,171207718,171208794	171185359,171185845,171193523,171196811,171199488,171204064,171205634,171207790,171211230	Gene ID= ENSG00000094963.13 TPM= 1.06 Transcript Type= protein_coding
chr1	171314234	171342084	171314234	171342084	+	ENST00000367749.3@FMO4	ENST00000367749.3	protein_coding	171314234,171316186,171319818,171323004,171324138,171331640,171332709,171334411,171337356,171341413	171314413,171316327,171319957,171323192,171324300,171331782,171332908,171334763,171337425,171342084	Gene ID= ENSG00000076258.9 TPM= 1.06 Transcript Type= protein_coding
chr1	171485503	171532775	171485503	171532775	+	transcript8660.chr1.nic@PRRC2C	transcript8660.chr1.nic	protein_coding	171485503,171512032,171512995,171514536,171515734,171517591,171522177,171523221,171523435,171524821,171527791,171532343	171485735,171512200,171513172,171514645,171515859,171517814,171522259,171523354,171523522,171524965,171527844,171532775	Gene ID= ENSG00000117523.15 TPM= 27.27 Transcript Type= NA
chr1	171485551	171532792	171485551	171532792	+	ENST00000476522.5@PRRC2C	ENST00000476522.5	protein_coding	171485551,171512032,171512995,171514536,171515734,171517591,171522177,171523221,171523435,171524821,171527791,171532343	171485735,171512200,171513172,171514630,171515859,171517814,171522259,171523354,171523522,171524965,171527844,171532792	Gene ID= ENSG00000117523.15 TPM= 36.83 Transcript Type= processed_transcript
chr1	171485551	171532775	171485551	171532775	+	ENST00000392078.7@PRRC2C	ENST00000392078.7	protein_coding	171485551,171512032,171512995,171514536,171515734,171517586,171522177,171523221,171523435,171524821,171527791,171532343	171485735,171512200,171513172,171514630,171515859,171517814,171522259,171523354,171523522,171524965,171527844,171532775	Gene ID= ENSG00000117523.15 TPM= 4.96 Transcript Type= protein_coding
chr1	171635417	171652683	171635417	171652683	-	ENST00000037502.10@MYOC	ENST00000037502.10	protein_coding	171652008,171638597,171635417	171652683,171638722,171636709	Gene ID= ENSG00000034971.16 TPM= 27.62 Transcript Type= protein_coding
chr1	171700160	171742247	171700160	171742247	-	ENST00000236192.11@VAMP4	ENST00000236192.11	protein_coding	171741910,171738349,171728524,171719171,171710714,171709665,171706367,171700160	171742247,171738463,171728570,171719221,171710814,171709744,171706418,171704534	Gene ID= ENSG00000117533.14 TPM= 5.31 Transcript Type= protein_coding
chr1	171703950	171742074	171703950	171742074	-	ENST00000367740.2@VAMP4	ENST00000367740.2	protein_coding	171741910,171738349,171728524,171719171,171710714,171709665,171706367,171703950	171742074,171738463,171728570,171719218,171710814,171709744,171706418,171704534	Gene ID= ENSG00000117533.14 TPM= 5.31 Transcript Type= protein_coding
chr1	171781660	171797717	171781660	171797717	+	transcript8679.chr1.nic@METTL13	transcript8679.chr1.nic	protein_coding	171781660,171783740,171785879,171787735,171792017,171794396,171796482	171782120,171784499,171786078,171787930,171792235,171794527,171797717	Gene ID= ENSG00000010165.19 TPM= 3.72 Transcript Type= NA
chr1	171781702	171797717	171781702	171797717	+	ENST00000361735.3@METTL13	ENST00000361735.3	protein_coding	171781702,171783740,171785879,171787735,171790452,171792017,171794396,171796482	171782120,171784499,171786078,171787930,171790616,171792235,171794527,171797717	Gene ID= ENSG00000010165.19 TPM= 6.9 Transcript Type= protein_coding
chr1	172393751	172444077	172393751	172444077	-	transcript8686.chr1.nnic@PIGC	transcript8686.chr1.nnic	protein_coding	172443988,172415294,172399819,172393751	172444077,172415374,172399916,172394410	Gene ID= ENSG00000135845.9 TPM= 3.19 Transcript Type= NA
chr1	172393751	172444147	172393751	172444147	-	transcript8687.chr1.nnic@PIGC	transcript8687.chr1.nnic	protein_coding	172443988,172399819,172393751	172444147,172399916,172394410	Gene ID= ENSG00000135845.9 TPM= 2.12 Transcript Type= NA
chr1	172441457	172444086	172441457	172444086	-	ENST00000367728.1@PIGC	ENST00000367728.1	protein_coding	172441457	172444086	Gene ID= ENSG00000135845.9 TPM= 1.06 Transcript Type= protein_coding
chr1	172441457	172444060	172441457	172444060	-	ENST00000344529.4@PIGC	ENST00000344529.4	protein_coding	172443988,172441457	172444060,172442830	Gene ID= ENSG00000135845.9 TPM= 18.06 Transcript Type= protein_coding
chr1	172452893	172468831	172452893	172468831	+	ENST00000367725.4@C1orf105	ENST00000367725.4	protein_coding	172452893,172456415,172462178,172465299,172468449	172453189,172456489,172462245,172465363,172468831	Gene ID= ENSG00000180999.10 TPM= 4.25 Transcript Type= protein_coding
chr1	172533095	172569106	172533095	172569106	+	transcript8696.chr1.nic@SUCO	transcript8696.chr1.nic	protein_coding	172533095,172551512,172553260,172555869,172557280,172557644,172569019	172533497,172551626,172553370,172556023,172557417,172557794,172569106	Gene ID= ENSG00000094975.13 TPM= 3.19 Transcript Type= NA
chr1	173477266	173488807	173477266	173488807	+	ENST00000340385.5@PRDX6	ENST00000340385.5	protein_coding	173477266,173481326,173485361,173486255,173487735	173477492,173481482,173485507,173486401,173488807	Gene ID= ENSG00000117592.8 TPM= 325.02 Transcript Type= protein_coding
chr1	173715027	173785513	173715027	173785513	+	transcript8721.chr1.nic@KLHL20	transcript8721.chr1.nic	protein_coding	173715027,173716003,173733713,173751764,173753213,173755923,173756976,173766146,173774305,173775634,173782124,173785163	173715654,173716066,173734286,173751922,173753307,173756038,173757159,173766289,173774438,173775842,173782230,173785513	Gene ID= ENSG00000076321.10 TPM= 2.12 Transcript Type= NA
chr1	173714984	173786702	173714984	173786702	+	ENST00000209884.4@KLHL20	ENST00000209884.4	protein_coding	173714984,173716003,173733713,173751764,173753213,173755923,173756976,173766146,173774305,173775634,173782124,173785163	173715078,173716066,173734286,173751922,173753307,173756038,173757159,173766289,173774438,173775842,173782230,173786702	Gene ID= ENSG00000076321.10 TPM= 2.12 Transcript Type= protein_coding
chr1	173824503	173858546	173824503	173858546	+	ENST00000361951.4@DARS2	ENST00000361951.4	protein_coding	173824503,173826687,173828333,173830660,173831535,173833376,173834473,173836940,173838190,173839367,173840866,173845229,173850327,173853349,173853795,173856666,173857518	173825356,173826786,173828399,173830761,173831630,173833499,173834519,173837046,173838259,173839546,173840973,173845291,173850479,173853567,173853905,173856741,173858546	Gene ID= ENSG00000117593.9 TPM= 5.84 Transcript Type= protein_coding
chr1	173824586	173858546	173824586	173858546	+	transcript8729.chr1.nnic@DARS2	transcript8729.chr1.nnic	protein_coding	173824586,173826687,173828333,173830660,173833376,173834473,173836940,173838190,173839367,173840866,173845229,173850327,173853349,173853795,173856666,173857518	173825356,173826786,173828399,173830761,173833499,173834519,173837046,173838259,173839546,173840973,173845291,173850479,173853567,173853905,173856741,173858546	Gene ID= ENSG00000117593.9 TPM= 3.72 Transcript Type= NA
chr1	173863901	173867987	173863901	173867987	-	ENST00000450589.5@GAS5	ENST00000450589.5	processed_transcript	173867960,173866991,173866761,173866528,173866177,173865857,173865471,173865229,173864675,173864484,173864257,173863901	173867987,173867043,173866796,173866567,173866206,173865894,173865547,173865282,173864704,173864506,173864304,173864075	Gene ID= ENSG00000234741.7 TPM= 7.97 Transcript Type= lincRNA
chr1	173863901	173868973	173863901	173868973	-	transcript8738.chr1.nic@GAS5	transcript8738.chr1.nic	processed_transcript	173867981,173866991,173866761,173866528,173866177,173865857,173865471,173865229,173864675,173864484,173864257,173863901	173868973,173867043,173866796,173866567,173866206,173865894,173865547,173865282,173864704,173864506,173864304,173864075	Gene ID= ENSG00000234741.7 TPM= 2.66 Transcript Type= NA
chr1	173863901	173867991	173863901	173867991	-	transcript8740.chr1.nic@GAS5	transcript8740.chr1.nic	processed_transcript	173867960,173866991,173866761,173866528,173866177,173865857,173865510,173865229,173864675,173864484,173864257,173863901	173867991,173867043,173866796,173866567,173866206,173865894,173865547,173865282,173864704,173864506,173864304,173864075	Gene ID= ENSG00000234741.7 TPM= 6.37 Transcript Type= NA
chr1	173863901	173867989	173863901	173867989	-	ENST00000436656.5@GAS5	ENST00000436656.5	processed_transcript	173867960,173866991,173866761,173866528,173866177,173865857,173865229,173864675,173864484,173864257,173863901	173867989,173867043,173866796,173866567,173866206,173865894,173865547,173864704,173864506,173864304,173864075	Gene ID= ENSG00000234741.7 TPM= 1.06 Transcript Type= retained_intron
chr1	173863901	173867991	173863901	173867991	-	transcript8743.chr1.nnic@GAS5	transcript8743.chr1.nnic	processed_transcript	173867960,173866991,173866761,173866528,173866177,173865857,173865471,173864675,173864484,173864257,173863901	173867991,173867043,173866796,173866567,173866206,173865894,173865547,173864704,173864506,173864304,173864075	Gene ID= ENSG00000234741.7 TPM= 2.12 Transcript Type= NA
chr1	173938514	174022391	173938514	174022391	-	transcript8758.chr1.nic@RC3H1	transcript8758.chr1.nic	protein_coding	174022096,173992755,173984499,173983418,173982727,173980809,173978488,173972509,173970505,173964839,173963973,173961725,173961077,173951986,173947369,173946746,173946476,173943442,173941265,173938514	174022391,173993135,173984619,173983657,173982902,173981009,173978620,173972627,173970617,173965120,173964187,173962095,173961244,173952138,173947582,173946836,173946608,173943588,173941380,173938871	Gene ID= ENSG00000135870.11 TPM= 12.75 Transcript Type= NA
chr1	174159465	174545911	174159465	174545911	+	transcript8767.chr1.nic@RABGAP1L	transcript8767.chr1.nic	protein_coding	174159465,174219125,174220972,174231145,174241483,174250475,174252480,174272414,174275833,174278613,174304986,174370979,174393995,174544844	174159657,174219295,174221164,174231355,174241657,174250632,174252590,174272480,174275935,174278779,174305127,174371072,174394145,174545911	Gene ID= ENSG00000152061.23 TPM= 64.79 Transcript Type= NA
chr1	174159530	174222781	174159530	174222781	+	transcript8771.chr1.nic@RABGAP1L	transcript8771.chr1.nic	protein_coding	174159530,174219125,174220972	174159657,174219295,174222781	Gene ID= ENSG00000152061.23 TPM= 2.12 Transcript Type= NA
chr1	174159581	174246346	174159581	174246346	+	ENST00000635248.1@RABGAP1L	ENST00000635248.1	protein_coding	174159581,174219125,174220972,174231145,174241483,174242982,174244298	174159657,174219295,174221164,174231355,174241657,174243179,174246346	Gene ID= ENSG00000152061.23 TPM= 1.06 Transcript Type= nonsense_mediated_decay
chr1	174159517	174958182	174159517	174958182	+	ENST00000251507.8@RABGAP1L	ENST00000251507.8	protein_coding	174159517,174219125,174220972,174231145,174241483,174250475,174252480,174272414,174275833,174278613,174304986,174370979,174393995,174637375,174683522,174699525,174702113,174752313,174811832,174957457,174957891	174159657,174219295,174221164,174231355,174241657,174250632,174252590,174272480,174275935,174278779,174305127,174371072,174394145,174637488,174683596,174699650,174702256,174752354,174811960,174957549,174958182	Gene ID= ENSG00000152061.23 TPM= 14.34 Transcript Type= protein_coding
chr1	174707242	174708261	174707242	174708261	-	transcript8779.chr1.nnic@NA	transcript8779.chr1.nnic	NA	174707242	174708261	Gene ID= novel_gene_chr1_8780 TPM= 2.12 Transcript Type= NA
chr1	174957725	174960072	174957725	174960072	-	transcript8777.chr1.nnic@NA	transcript8777.chr1.nnic	NA	174957725	174960072	Gene ID= novel_gene_chr1_8778 TPM= 9.03 Transcript Type= NA
chr1	174967331	174990409	174967331	174990409	+	transcript8781.chr1.nnic@RABGAP1L	transcript8781.chr1.nnic	protein_coding	174967331,174976076,174978807,174982834,174988641,174989849	174969387,174976182,174978890,174982905,174988838,174990409	Gene ID= ENSG00000152061.23 TPM= 5.31 Transcript Type= NA
chr1	174999163	175011715	174999163	175011715	+	ENST00000613570.4@CACYBP	ENST00000613570.4	protein_coding	174999163,175004614,175006745,175007098,175008609,175009923	174999689,175004833,175006841,175007197,175008706,175011715	Gene ID= ENSG00000116161.17 TPM= 1.06 Transcript Type= protein_coding
chr1	174999733	175011710	174999733	175011710	+	ENST00000367679.6@CACYBP	ENST00000367679.6	protein_coding	174999733,175004614,175006745,175007098,175008609,175009923	175000195,175004833,175006841,175007197,175008706,175011710	Gene ID= ENSG00000116161.17 TPM= 31.86 Transcript Type= protein_coding
chr1	175012958	175023425	175012958	175023425	-	ENST00000476371.1@MRPS14	ENST00000476371.1	protein_coding	175023364,175018418,175012958	175023425,175018576,175014851	Gene ID= ENSG00000120333.4 TPM= 11.68 Transcript Type= protein_coding
chr1	175944831	176207493	175944831	176207493	-	ENST00000367669.7@RFWD2	ENST00000367669.7	protein_coding	176206572,176184633,176175910,176163815,176162869,176149006,176136488,176135010,176116624,176085776,176081152,176046181,176043710,176043186,176027572,175989362,175988288,175986943,175947195,175944831	176207493,176184692,176176007,176163891,176162988,176149074,176136547,176135086,176116681,176085890,176081287,176046324,176043818,176043267,176027688,175989479,175988412,175987103,175947239,175945170	Gene ID= ENSG00000143207.19 TPM= 27.62 Transcript Type= protein_coding
chr1	175944831	176207290	175944831	176207290	-	transcript8812.chr1.nic@RFWD2	transcript8812.chr1.nic	protein_coding	176206572,176184633,176175910,176163815,176162869,176149006,176135010,176116624,176085776,176081152,176046181,176043710,176043186,176027572,175989362,175988288,175986943,175947195,175944831	176207290,176184692,176176007,176163891,176162988,176149074,176135086,176116681,176085890,176081287,176046324,176043818,176043267,176027688,175989479,175988412,175987103,175947239,175945170	Gene ID= ENSG00000143207.19 TPM= 3.19 Transcript Type= NA
chr1	177928791	178022587	177928791	178022587	-	ENST00000466953.6@AL359075.2	ENST00000466953.6	processed_transcript	178022440,177967683,177965893,177965047,177964171,177961590,177958840,177958132,177954279,177951914,177947825,177946420,177944561,177941900,177940610,177939702,177937214,177936298,177933484,177933214,177932698,177932490,177930545,177928791	178022587,177968039,177966005,177965167,177964279,177961734,177960939,177958362,177954376,177951995,177947942,177946531,177944666,177942040,177940714,177939777,177937513,177936365,177933636,177933312,177932809,177932569,177930643,177929929	Gene ID= ENSG00000254154.8 TPM= 3.19 Transcript Type= retained_intron
chr1	178024916	178037964	178024916	178037964	-	transcript8825.chr1.nnic@AL359075.1	transcript8825.chr1.nnic	transcribed_unitary_pseudogene	178037897,178037694,178034705,178026155,178024916	178037964,178037801,178034801,178026255,178025962	Gene ID= ENSG00000242193.10 TPM= 3.19 Transcript Type= NA
chr1	178091509	178093600	178091509	178093600	-	ENST00000419458.1@RASAL2-AS1	ENST00000419458.1	lincRNA	178093534,178091509	178093600,178093412	Gene ID= ENSG00000224687.1 TPM= 1.06 Transcript Type= lincRNA
chr1	178093150	178093572	178093150	178093572	-	ENST00000452867.1@RASAL2-AS1	ENST00000452867.1	lincRNA	178093534,178093150	178093572,178093410	Gene ID= ENSG00000224687.1 TPM= 1.06 Transcript Type= lincRNA
chr1	178093680	178442913	178093680	178442913	+	transcript8833.chr1.nic@RASAL2	transcript8833.chr1.nic	protein_coding	178093680,178283564,178299992,178390100,178420511,178439422,178441549,178442675	178094694,178283691,178300118,178390206,178420620,178439575,178441647,178442913	Gene ID= ENSG00000075391.16 TPM= 19.65 Transcript Type= NA
chr1	178341440	178442913	178341440	178442913	+	transcript8834.chr1.nic@RASAL2	transcript8834.chr1.nic	protein_coding	178341440,178390100,178420511,178439422,178441549,178442675	178341608,178390206,178420620,178439575,178441647,178442913	Gene ID= ENSG00000075391.16 TPM= 6.9 Transcript Type= NA
chr1	178324092	178341333	178324092	178341333	-	transcript8835.chr1.nnic@NA	transcript8835.chr1.nnic	NA	178341266,178338729,178335636,178324092	178341333,178338834,178335708,178324409	Gene ID= novel_gene_chr1_8836 TPM= 2.12 Transcript Type= NA
chr1	178324092	178341334	178324092	178341334	-	transcript8837.chr1.nnic@NA	transcript8837.chr1.nnic	NA	178338729,178335636,178324092	178341334,178335708,178324409	Gene ID= novel_gene_chr1_8838 TPM= 2.12 Transcript Type= NA
chr1	178850624	178869303	178850624	178869303	-	transcript8843.chr1.nic@ANGPTL1	transcript8843.chr1.nic	protein_coding	178869114,178864954,178853594,178852683,178850624	178869303,178865802,178853787,178852953,178851316	Gene ID= ENSG00000116194.12 TPM= 12.75 Transcript Type= NA
chr1	178849705	178871052	178849705	178871052	-	ENST00000234816.6@ANGPTL1	ENST00000234816.6	protein_coding	178870741,178869114,178864954,178853594,178852683,178849705	178871052,178869223,178865802,178853787,178852953,178851316	Gene ID= ENSG00000116194.12 TPM= 1.06 Transcript Type= protein_coding
chr1	179025896	179076562	179025896	179076562	+	ENST00000263733.4@FAM20B	ENST00000263733.4	protein_coding	179025896,179043715,179050279,179054529,179063927,179064305,179066800,179071913	179026098,179044224,179050365,179054638,179064098,179064496,179066859,179076562	Gene ID= ENSG00000116199.11 TPM= 20.18 Transcript Type= protein_coding
chr1	179081377	179095996	179081377	179095996	+	ENST00000367627.7@TOR3A	ENST00000367627.7	protein_coding	179081377,179082940,179085628,179087911,179094093,179094968	179082387,179083053,179085893,179088089,179094217,179095996	Gene ID= ENSG00000186283.13 TPM= 41.96 Transcript Type= protein_coding
chr1	179086983	179095996	179086983	179095996	+	transcript8853.chr1.nic@TOR3A	transcript8853.chr1.nic	protein_coding	179086983,179094093,179094968	179088089,179094217,179095996	Gene ID= ENSG00000186283.13 TPM= 4.78 Transcript Type= NA
chr1	179293714	179358677	179293714	179358677	+	ENST00000539888.5@SOAT1	ENST00000539888.5	protein_coding	179293714,179323437,179335506,179337837,179339438,179341028,179342114,179342862,179343590,179344947,179347600,179348844,179350296,179351317,179353585	179293936,179323495,179335657,179337896,179339545,179341310,179342192,179342943,179343635,179345076,179347697,179348942,179350431,179351462,179358677	Gene ID= ENSG00000057252.12 TPM= 1.06 Transcript Type= protein_coding
chr1	179882042	179919708	179882042	179919708	+	ENST00000528443.6@TOR1AIP1	ENST00000528443.6	protein_coding	179882042,179884692,179889310,179900126,179901302,179903966,179907823,179908605,179913998,179917452	179882977,179884769,179889369,179900167,179901388,179904022,179907864,179908673,179914054,179919708	Gene ID= ENSG00000143337.18 TPM= 7.44 Transcript Type= protein_coding
chr1	179900262	179900564	179900262	179900564	+	ENST00000580835.2@RN7SL230P	ENST00000580835.2	misc_RNA	179900262	179900564	Gene ID= ENSG00000264916.2 TPM= 1.06 Transcript Type= misc_RNA
chr1	179954738	180114880	179954738	180114880	+	ENST00000367607.7@CEP350	ENST00000367607.7	protein_coding	179954738,179986169,179987240,179990507,179992062,179996553,180003174,180006454,180011929,180013847,180015849,180019949,180022698,180024419,180031320,180033862,180036926,180041138,180041662,180043056,180044051,180048536,180052970,180053750,180054415,180062220,180065115,180075022,180078463,180080517,180084018,180087578,180090714,180092614,180095523,180096038,180098863,180110997	179955142,179986254,179987286,179990621,179992221,179997175,180003287,180006567,180012075,180014505,180015970,180021009,180022848,180024582,180031494,180034082,180037089,180041248,180041802,180043192,180044173,180048705,180053166,180053934,180054502,180062366,180065272,180075221,180078674,180080661,180084178,180087717,180090796,180094616,180095930,180096184,180098985,180114880	Gene ID= ENSG00000135837.15 TPM= 4.25 Transcript Type= protein_coding
chr1	180034475	180035646	180034475	180035646	-	transcript8880.chr1.nnic@NA	transcript8880.chr1.nnic	NA	180034475	180035646	Gene ID= novel_gene_chr1_8881 TPM= 2.12 Transcript Type= NA
chr1	180154817	180198016	180154817	180198016	+	transcript8886.chr1.nic@QSOX1	transcript8886.chr1.nic	protein_coding	180154817,180166491,180175321,180175931,180178794,180182174,180183916,180186053,180189552,180190433,180194213,180196262,180197333	180155172,180166591,180175366,180176033,180178884,180182319,180184050,180186182,180189674,180190580,180194392,180196890,180198016	Gene ID= ENSG00000116260.16 TPM= 21.24 Transcript Type= NA
chr1	180154834	180204030	180154834	180204030	+	ENST00000367602.7@QSOX1	ENST00000367602.7	protein_coding	180154834,180166491,180175321,180175931,180178794,180182174,180183916,180186053,180189552,180190433,180194213,180196262	180155172,180166591,180175366,180176033,180178884,180182319,180184050,180186182,180189674,180190580,180194392,180204030	Gene ID= ENSG00000116260.16 TPM= 10.09 Transcript Type= protein_coding
chr1	180154897	180198034	180154897	180198034	+	ENST00000367600.5@QSOX1	ENST00000367600.5	protein_coding	180154897,180166491,180175321,180175931,180178794,180182174,180183916,180186053,180189552,180190433,180194213,180196262,180197333	180155172,180166591,180175366,180176033,180178884,180182319,180184050,180186182,180189674,180190580,180194392,180196599,180198034	Gene ID= ENSG00000116260.16 TPM= 56.83 Transcript Type= protein_coding
chr1	180171504	180175167	180171504	180175167	+	transcript8892.chr1.nnic@NA	transcript8892.chr1.nnic	NA	180171504	180175167	Gene ID= novel_gene_chr1_8893 TPM= 2.12 Transcript Type= NA
chr1	180288230	180502954	180288230	180502954	-	ENST00000367595.3@ACBD6	ENST00000367595.3	protein_coding	180502045,180495461,180492269,180430180,180413366,180397516,180314692,180288230	180502954,180495525,180492365,180430262,180413471,180397605,180314722,180288517	Gene ID= ENSG00000230124.6 TPM= 29.74 Transcript Type= protein_coding
chr1	180288230	180502804	180288230	180502804	-	transcript8897.chr1.nnic@ACBD6	transcript8897.chr1.nnic	protein_coding	180502045,180430180,180413366,180397516,180314692,180288230	180502804,180430262,180413471,180397605,180314722,180288517	Gene ID= ENSG00000230124.6 TPM= 2.12 Transcript Type= NA
chr1	180276816	180279850	180276816	180279850	+	transcript8898.chr1.nnic@NA	transcript8898.chr1.nnic	NA	180276816	180279850	Gene ID= novel_gene_chr1_8899 TPM= 2.12 Transcript Type= NA
chr1	180561130	180566518	180561130	180566518	+	transcript8901.chr1.nnic@OVAAL	transcript8901.chr1.nnic	lincRNA	180561130,180562204,180565251	180561302,180562344,180566518	Gene ID= ENSG00000236719.2 TPM= 3.19 Transcript Type= NA
chr1	180561524	180566518	180561524	180566518	+	transcript8903.chr1.nnic@OVAAL	transcript8903.chr1.nnic	lincRNA	180561524,180562204,180565251	180561692,180562344,180566518	Gene ID= ENSG00000236719.2 TPM= 3.19 Transcript Type= NA
chr1	180631998	180875528	180631998	180875528	+	transcript8907.chr1.nic@XPR1	transcript8907.chr1.nic	protein_coding	180631998,180682360,180787753,180803388,180806062,180806474,180811407,180824753,180825165,180834874,180836522,180863708,180873803	180632270,180682411,180787854,180803611,180806211,180806557,180811488,180824943,180825344,180835045,180836716,180863874,180875528	Gene ID= ENSG00000143324.13 TPM= 3.19 Transcript Type= NA
chr1	180631998	180838862	180631998	180838862	+	transcript8909.chr1.nic@XPR1	transcript8909.chr1.nic	protein_coding	180631998,180682360,180787753,180803388,180806062,180806474,180811407,180824753,180825165,180834874,180836522	180632270,180682411,180787854,180803611,180806211,180806557,180811488,180824943,180825344,180835045,180838862	Gene ID= ENSG00000143324.13 TPM= 6.37 Transcript Type= NA
chr1	180631998	180826552	180631998	180826552	+	transcript8911.chr1.nic@XPR1	transcript8911.chr1.nic	protein_coding	180631998,180682360,180787753,180803388,180806062,180806474,180811407,180824753,180825165	180632270,180682411,180787854,180803611,180806211,180806557,180811488,180824943,180826552	Gene ID= ENSG00000143324.13 TPM= 4.25 Transcript Type= NA
chr1	180632004	180890251	180632004	180890251	+	ENST00000367590.8@XPR1	ENST00000367590.8	protein_coding	180632004,180682360,180787753,180803388,180806062,180806474,180811407,180824753,180825165,180834874,180836522,180863708,180873803,180880076,180884006	180632270,180682411,180787854,180803611,180806211,180806557,180811488,180824943,180825344,180835045,180836716,180863874,180873942,180880297,180890251	Gene ID= ENSG00000143324.13 TPM= 39.3 Transcript Type= protein_coding
chr1	180744656	180748089	180744656	180748089	-	transcript8916.chr1.nnic@NA	transcript8916.chr1.nnic	NA	180744656	180748089	Gene ID= novel_gene_chr1_8917 TPM= 18.06 Transcript Type= NA
chr1	180789594	180790050	180789594	180790050	-	transcript8918.chr1.nnic@NA	transcript8918.chr1.nnic	NA	180789594	180790050	Gene ID= novel_gene_chr1_8919 TPM= 2.12 Transcript Type= NA
chr1	180912646	180914054	180912646	180914054	+	transcript8938.chr1.nnic@NA	transcript8938.chr1.nnic	NA	180912646	180914054	Gene ID= novel_gene_chr1_8939 TPM= 2.12 Transcript Type= NA
chr1	180944036	180946664	180944036	180946664	-	transcript8940.chr1.nnic@NA	transcript8940.chr1.nnic	NA	180944036	180946664	Gene ID= novel_gene_chr1_8941 TPM= 2.12 Transcript Type= NA
chr1	180949690	181022958	180949690	181022958	-	transcript8924.chr1.nnic@STX6	transcript8924.chr1.nnic	protein_coding	181022639,181005294,181002606,180993363,180989984,180988239,180984677,180949690	181022958,181005463,181002700,180993425,180990109,180988345,180984771,180950918	Gene ID= ENSG00000135823.13 TPM= 3.19 Transcript Type= NA
chr1	180982709	181022958	180982709	181022958	-	transcript8931.chr1.nnic@STX6	transcript8931.chr1.nnic	protein_coding	181022639,181005294,181002606,180993363,180989984,180988239,180984677,180982709	181022958,181005463,181002700,180993425,180990109,180988345,180984771,180982929	Gene ID= ENSG00000135823.13 TPM= 2.12 Transcript Type= NA
chr1	180972712	181023121	180972712	181023121	-	ENST00000542060.5@STX6	ENST00000542060.5	protein_coding	181022639,180993363,180989984,180988239,180984677,180972712	181023121,180993425,180990109,180988345,180984771,180976646	Gene ID= ENSG00000135823.13 TPM= 1.06 Transcript Type= protein_coding
chr1	181033425	181061938	181033425	181061938	+	ENST00000614012.4@MR1	ENST00000614012.4	protein_coding	181033425,181033887,181049052,181050011,181052235,181053573,181055225	181033464,181034074,181049312,181050286,181052510,181053677,181061938	Gene ID= ENSG00000153029.14 TPM= 1.06 Transcript Type= protein_coding
chr1	181033425	181061938	181033425	181061938	+	ENST00000617803.4@MR1	ENST00000617803.4	protein_coding	181033425,181033887,181049052,181050011,181053573,181055225	181033464,181034074,181049312,181050286,181053677,181061938	Gene ID= ENSG00000153029.14 TPM= 1.06 Transcript Type= protein_coding
chr1	181033425	181061938	181033425	181061938	+	ENST00000434571.6@MR1	ENST00000434571.6	protein_coding	181033425,181033887,181049052,181050011,181055225	181033464,181034074,181049312,181050286,181061938	Gene ID= ENSG00000153029.14 TPM= 1.06 Transcript Type= protein_coding
chr1	181034003	181056553	181034003	181056553	+	ENST00000282990.10@MR1	ENST00000282990.10	protein_coding	181034003,181049052,181050011,181053573,181055225	181034074,181049312,181050286,181053677,181056553	Gene ID= ENSG00000153029.14 TPM= 2.12 Transcript Type= protein_coding
chr1	181088700	181090841	181088700	181090841	+	transcript8947.chr1.nnic@NA	transcript8947.chr1.nnic	NA	181088700	181090841	Gene ID= novel_gene_chr1_8948 TPM= 70.1 Transcript Type= NA
chr1	182381705	182392206	182381705	182392206	-	ENST00000311223.9@GLUL	ENST00000311223.9	protein_coding	182391679,182390497,182388572,182387131,182386256,182385760,182385357,182381705	182392206,182390852,182388750,182387292,182386402,182385887,182385556,182384723	Gene ID= ENSG00000135821.17 TPM= 2.12 Transcript Type= protein_coding
chr1	182381705	182391404	182381705	182391404	-	ENST00000417584.6@GLUL	ENST00000417584.6	protein_coding	182391175,182388572,182387131,182386256,182385760,182385357,182381705	182391404,182388750,182387292,182386402,182385887,182385556,182384723	Gene ID= ENSG00000135821.17 TPM= 7.44 Transcript Type= protein_coding
chr1	182381704	182392206	182381704	182392206	-	ENST00000331872.10@GLUL	ENST00000331872.10	protein_coding	182391679,182388572,182387131,182386256,182385760,182385357,182381704	182392206,182388750,182387292,182386402,182385887,182385556,182384723	Gene ID= ENSG00000135821.17 TPM= 84.97 Transcript Type= protein_coding
chr1	182573634	182589256	182573634	182589256	-	ENST00000367559.7@RNASEL	ENST00000367559.7	protein_coding	182589167,182585327,182584081,182582053,182581225,182576256,182573634	182589256,182586970,182584166,182582258,182581357,182576389,182575578	Gene ID= ENSG00000135828.11 TPM= 7.44 Transcript Type= protein_coding
chr1	182598623	182604408	182598623	182604408	-	ENST00000367558.5@RGS16	ENST00000367558.5	protein_coding	182604216,182603229,182602420,182601966,182598623	182604408,182603339,182602484,182602132,182600513	Gene ID= ENSG00000143333.6 TPM= 5.31 Transcript Type= protein_coding
chr1	182789293	182830384	182789293	182830384	+	ENST00000488424.5@NPL	ENST00000488424.5	protein_coding	182789293,182792232,182794356,182803698,182806145,182812156,182814783,182816714,182818541,182818813,182822115,182825781,182829603	182789805,182792286,182794439,182803771,182806232,182812213,182814858,182816806,182818689,182818859,182822199,182825820,182830384	Gene ID= ENSG00000135838.13 TPM= 2.12 Transcript Type= processed_transcript
chr1	182839316	182874914	182839316	182874914	+	transcript8973.chr1.nic@DHX9	transcript8973.chr1.nic	protein_coding	182839316,182842545,182843294,182852233,182853306,182854030,182856532,182858104,182858551,182858733,182859040,182859993,182866444,182866961,182872337,182874854	182839456,182842677,182843434,182852344,182853418,182854178,182856578,182858240,182858640,182858894,182859117,182860184,182866585,182867043,182872493,182874914	Gene ID= ENSG00000135829.16 TPM= 3.19 Transcript Type= NA
chr1	182839369	182887751	182839369	182887751	+	ENST00000367549.3@DHX9	ENST00000367549.3	protein_coding	182839369,182842545,182843294,182852233,182853306,182854030,182856532,182858104,182858551,182858733,182859040,182859993,182866444,182866961,182872337,182874854,182876050,182876447,182876830,182878021,182879250,182880497,182881264,182881520,182883139,182883520,182884613,182887083	182839456,182842677,182843434,182852344,182853418,182854178,182856578,182858240,182858640,182858894,182859117,182860184,182866585,182867043,182872493,182874954,182876263,182876541,182876903,182878173,182879410,182880608,182881425,182881647,182883368,182883635,182884813,182887751	Gene ID= ENSG00000135829.16 TPM= 26.55 Transcript Type= protein_coding
chr1	182868522	182874612	182868522	182874612	-	transcript8974.chr1.nnic@NA	transcript8974.chr1.nnic	NA	182868522	182874612	Gene ID= novel_gene_chr1_8975 TPM= 2.12 Transcript Type= NA
chr1	183023206	183117162	183023206	183117162	+	transcript8982.chr1.nic@LAMC1	transcript8982.chr1.nic	protein_coding	183023206,183103328,183108276,183110488,183114531,183115520,183116577,183116767	183024134,183103632,183108406,183110654,183114719,183115637,183116675,183117162	Gene ID= ENSG00000135862.5 TPM= 5.84 Transcript Type= NA
chr1	183023206	183105246	183023206	183105246	+	transcript8983.chr1.nic@LAMC1	transcript8983.chr1.nic	protein_coding	183023206,183103328	183024134,183105246	Gene ID= ENSG00000135862.5 TPM= 2.66 Transcript Type= NA
chr1	183023460	183145592	183023460	183145592	+	ENST00000258341.4@LAMC1	ENST00000258341.4	protein_coding	183023460,183103328,183108276,183110488,183114531,183115520,183116577,183116767,183117320,183117534,183118034,183121723,183122063,183124631,183125397,183126120,183127226,183128594,183130344,183131299,183132400,183133406,183134660,183135042,183136386,183137669,183140404,183142534	183024134,183103632,183108406,183110654,183114719,183115637,183116675,183116903,183117442,183117723,183118146,183121944,183122251,183124876,183125550,183126262,183127404,183128750,183130549,183131378,183132537,183133550,183134809,183135156,183136585,183137827,183140503,183145592	Gene ID= ENSG00000135862.5 TPM= 73.29 Transcript Type= protein_coding
chr1	183472478	183554193	183472478	183554193	+	ENST00000367537.7@SMG7	ENST00000367537.7	protein_coding	183472478,183502253,183512837,183515874,183517688,183526596,183527956,183528892,183529398,183533164,183533676,183537145,183538380,183540984,183542076,183544353,183544930,183545966,183547103,183549208,183549764,183550751,183551045,183551818	183472649,183502391,183512868,183515991,183517820,183526767,183528027,183529042,183529533,183533326,183533832,183537215,183538440,183541103,183542364,183544497,183545312,183546337,183547252,183549288,183549923,183550921,183551190,183554193	Gene ID= ENSG00000116698.21 TPM= 13.81 Transcript Type= protein_coding
chr1	183623266	183635682	183623266	183635682	-	ENST00000367534.5@ARPC5	ENST00000367534.5	protein_coding	183635517,183633082,183630461,183623266	183635682,183633154,183630637,183623471	Gene ID= ENSG00000162704.15 TPM= 2.12 Transcript Type= protein_coding
chr1	183636085	183928531	183636085	183928531	+	ENST00000304685.8@RGL1	ENST00000304685.8	protein_coding	183636085,183742126,183806375,183847566,183865996,183880616,183883786,183884723,183888474,183892077,183897808,183900150,183902568,183904850,183907012,183912082,183916447,183922222,183926105	183636501,183742289,183806485,183847774,183866073,183880800,183883910,183884938,183888577,183892161,183897897,183900236,183902600,183904971,183907101,183912268,183916701,183922336,183928531	Gene ID= ENSG00000143344.15 TPM= 6.37 Transcript Type= protein_coding
chr1	183805120	183928531	183805120	183928531	+	ENST00000360851.3@RGL1	ENST00000360851.3	protein_coding	183805120,183806375,183847566,183865996,183880616,183883786,183884723,183888474,183892077,183897808,183900150,183902568,183904850,183907012,183912082,183916447,183922222,183926105	183805324,183806485,183847774,183866073,183880800,183883910,183884938,183888577,183892161,183897897,183900236,183902600,183904971,183907101,183912268,183916701,183922336,183928531	Gene ID= ENSG00000143344.15 TPM= 4.25 Transcript Type= protein_coding
chr1	183650710	183653822	183650710	183653822	-	transcript9005.chr1.nnic@NA	transcript9005.chr1.nnic	NA	183650710	183653822	Gene ID= novel_gene_chr1_9006 TPM= 2.12 Transcript Type= NA
chr1	183806572	183809433	183806572	183809433	-	transcript9003.chr1.nnic@NA	transcript9003.chr1.nnic	NA	183806572	183809433	Gene ID= novel_gene_chr1_9004 TPM= 5.31 Transcript Type= NA
chr1	183935837	184037729	183935837	184037729	-	ENST00000361927.8@COLGALT2	ENST00000361927.8	protein_coding	184037095,183978410,183975097,183973616,183969269,183963901,183954762,183951007,183945432,183944196,183940581,183935837	184037729,183978520,183975214,183973750,183969473,183964020,183954838,183951113,183945564,183944323,183940787,183939037	Gene ID= ENSG00000198756.10 TPM= 12.75 Transcript Type= protein_coding
chr1	184051729	184095846	184051729	184095846	+	transcript9018.chr1.nnic@TSEN15	transcript9018.chr1.nnic	protein_coding	184051729,184054354,184054728,184095690	184051890,184054435,184054863,184095846	Gene ID= ENSG00000198860.11 TPM= 8.5 Transcript Type= NA
chr1	184051677	184074212	184051677	184074212	+	ENST00000361641.5@TSEN15	ENST00000361641.5	protein_coding	184051677,184054354,184054728,184072157,184072827	184051890,184054435,184054863,184072298,184074212	Gene ID= ENSG00000198860.11 TPM= 24.43 Transcript Type= protein_coding
chr1	184051746	184074206	184051746	184074206	+	ENST00000423085.6@TSEN15	ENST00000423085.6	protein_coding	184051746,184054354,184054728,184072827	184051890,184054435,184054863,184074206	Gene ID= ENSG00000198860.11 TPM= 4.25 Transcript Type= protein_coding
chr1	184494847	184495458	184494847	184495458	-	transcript9033.chr1.nnic@NA	transcript9033.chr1.nnic	NA	184494847	184495458	Gene ID= novel_gene_chr1_9034 TPM= 2.12 Transcript Type= NA
chr1	184690231	184754913	184690231	184754913	-	ENST00000318130.12@EDEM3	ENST00000318130.12	protein_coding	184754489,184749547,184737611,184737025,184734531,184732837,184726255,184723751,184721289,184719443,184719162,184717540,184716888,184712433,184711723,184710394,184708153,184706643,184702811,184690231	184754913,184749592,184737711,184737064,184734643,184732990,184726389,184723856,184721386,184719568,184719245,184717623,184717012,184712598,184711877,184710547,184708344,184706808,184702996,184694472	Gene ID= ENSG00000116406.18 TPM= 3.19 Transcript Type= protein_coding
chr1	184793927	184974498	184793927	184974498	-	transcript9044.chr1.nnic@FAM129A	transcript9044.chr1.nnic	protein_coding	184974302,184899179,184894075,184890108,184884633,184831847,184823638,184823167,184818638,184808074,184803585,184798079,184793927	184974498,184899309,184894206,184890222,184884800,184831962,184823742,184823329,184818825,184808235,184803692,184798190,184796097	Gene ID= ENSG00000135842.16 TPM= 40.36 Transcript Type= NA
chr1	184795533	184974556	184795533	184974556	-	transcript9046.chr1.nic@FAM129A	transcript9046.chr1.nic	protein_coding	184974302,184899179,184894075,184890108,184884633,184831847,184823167,184818638,184808074,184805946,184803585,184798079,184795533	184974556,184899309,184894206,184890222,184884800,184831962,184823329,184818825,184808235,184806056,184803692,184798190,184796097	Gene ID= ENSG00000135842.16 TPM= 9.21 Transcript Type= NA
chr1	184791030	184974550	184791030	184974550	-	ENST00000367511.3@FAM129A	ENST00000367511.3	protein_coding	184974302,184899179,184894075,184890108,184884633,184831847,184823638,184823167,184818638,184808074,184805946,184803585,184798079,184791030	184974550,184899309,184894206,184890222,184884800,184831962,184823742,184823329,184818825,184808235,184806056,184803692,184798190,184796097	Gene ID= ENSG00000135842.16 TPM= 221.99 Transcript Type= protein_coding
chr1	184881334	184884293	184881334	184884293	+	transcript9067.chr1.nnic@NA	transcript9067.chr1.nnic	NA	184881334	184884293	Gene ID= novel_gene_chr1_9068 TPM= 3.19 Transcript Type= NA
chr1	184967064	184970189	184967064	184970189	+	transcript9056.chr1.nnic@NA	transcript9056.chr1.nnic	NA	184967064,184968230,184969948	184967907,184969811,184970189	Gene ID= novel_gene_chr1_9057 TPM= 2.12 Transcript Type= NA
chr1	185045364	185102608	185045364	185102608	+	ENST00000367510.7@RNF2	ENST00000367510.7	protein_coding	185045364,185087552,185091579,185093061,185098072,185099791,185100200	185045649,185087640,185091739,185093276,185098344,185099962,185102608	Gene ID= ENSG00000121481.10 TPM= 4.25 Transcript Type= protein_coding
chr1	185118098	185156981	185118098	185156981	-	ENST00000367506.9@TRMT1L	ENST00000367506.9	protein_coding	185156478,185151825,185150379,185147182,185145439,185143906,185143357,185139973,185139367,185137606,185128669,185124944,185123857,185120383,185118098	185156981,185151935,185150492,185147246,185145568,185144029,185143436,185140222,185139579,185137796,185128747,185125110,185123919,185120509,185120271	Gene ID= ENSG00000121486.11 TPM= 2.12 Transcript Type= protein_coding
chr1	185133598	185134479	185133598	185134479	-	transcript9090.chr1.nnic@NA	transcript9090.chr1.nnic	NA	185133598	185134479	Gene ID= novel_gene_chr1_9091 TPM= 3.19 Transcript Type= NA
chr1	185157159	185291765	185157159	185291765	+	ENST00000367500.8@SWT1	ENST00000367500.8	protein_coding	185157159,185160833,185166572,185168340,185174372,185180391,185181946,185184243,185184743,185190549,185202654,185204700,185206625,185214507,185221849,185231577,185271323,185276604,185290674	185157314,185160925,185166652,185168398,185175113,185180450,185182057,185184344,185184931,185190642,185202799,185204863,185206763,185214655,185222036,185231708,185271389,185276668,185291765	Gene ID= ENSG00000116668.12 TPM= 1.06 Transcript Type= protein_coding
chr1	185304989	185317266	185304989	185317266	-	transcript9117.chr1.nic@IVNS1ABP	transcript9117.chr1.nic	protein_coding	185316953,185311095,185309383,185309003,185308800,185307489,185307014,185304989	185317266,185311322,185309511,185309172,185308875,185307662,185307139,185306625	Gene ID= ENSG00000116679.15 TPM= 14.87 Transcript Type= NA
chr1	186336555	186375354	186336555	186375354	-	transcript9122.chr1.nic@TPR	transcript9122.chr1.nic	protein_coding	186374878,186373359,186370970,186367886,186363342,186362837,186362288,186361789,186361622,186360765,186360273,186359799,186358543,186357397,186356286,186355635,186355410,186353688,186351976,186351330,186350223,186347292,186346135,186345580,186344375,186343906,186343326,186341252,186341028,186339642,186338033,186337013,186336555	186375354,186373463,186371043,186367982,186363445,186363001,186362380,186361869,186361709,186360905,186360364,186359996,186358650,186357623,186356449,186355768,186355558,186353850,186352110,186351470,186350388,186347458,186346287,186345696,186344578,186344090,186343473,186341389,186341159,186339772,186338243,186337156,186336694	Gene ID= ENSG00000047410.13 TPM= 8.21 Transcript Type= NA
chr1	186355523	186361884	186355523	186361884	-	transcript9146.chr1.nic@TPR	transcript9146.chr1.nic	protein_coding	186361789,186361622,186360765,186360273,186359799,186358543,186357397,186356286,186355635,186355523	186361884,186361709,186360905,186360364,186359996,186358650,186357623,186356449,186355768,186355558	Gene ID= ENSG00000047410.13 TPM= 6.37 Transcript Type= NA
chr1	186375838	186421372	186375838	186421372	+	transcript9133.chr1.nnic@C1orf27	transcript9133.chr1.nnic	protein_coding	186375838,186379767,186383022,186385988,186388442,186389588,186390711,186391696,186393947,186398313,186398954,186406083,186417544,186419009,186420088	186375974,186379884,186383156,186386083,186388548,186389624,186390851,186391791,186394015,186398441,186399044,186406268,186417654,186419077,186421372	Gene ID= ENSG00000157181.15 TPM= 2.66 Transcript Type= NA
chr1	186375869	186421378	186375869	186421378	+	ENST00000287859.10@C1orf27	ENST00000287859.10	protein_coding	186375869,186379767,186383022,186385988,186388442,186389588,186390711,186391696,186393947,186398313,186398954,186406083,186417544,186419009	186375974,186379884,186383156,186386083,186388548,186389624,186390851,186391791,186394015,186398441,186399044,186406268,186417654,186421378	Gene ID= ENSG00000157181.15 TPM= 1.59 Transcript Type= protein_coding
chr1	186828953	186988981	186828953	186988981	+	ENST00000367466.3@PLA2G4A	ENST00000367466.3	protein_coding	186828953,186854286,186870435,186893011,186894098,186906965,186911248,186932763,186939008,186939980,186946637,186946869,186950657,186956102,186965409,186977593,186979315,186988377	186829035,186854387,186870516,186893159,186894211,186907002,186911389,186932899,186939230,186940094,186946774,186946961,186950728,186956344,186965593,186977788,186979472,186988981	Gene ID= ENSG00000116711.9 TPM= 2.12 Transcript Type= protein_coding
chr1	192809041	192812283	192809041	192812283	+	ENST00000235382.6@RGS2	ENST00000235382.6	protein_coding	192809041,192810166,192810370,192810981,192811402	192809181,192810267,192810431,192811147,192812283	Gene ID= ENSG00000116741.7 TPM= 4.25 Transcript Type= protein_coding
chr1	193014332	193059396	193014332	193059396	-	transcript9162.chr1.nic@UCHL5	transcript9162.chr1.nic	protein_coding	193059185,193051754,193049746,193029532,193029388,193029179,193028085,193023844,193022926,193021097,193020307,193014332	193059396,193051817,193049851,193029657,193029449,193029309,193028148,193023946,193023036,193021195,193020381,193016395	Gene ID= ENSG00000116750.13 TPM= 2.12 Transcript Type= NA
chr1	193018405	193059383	193018405	193059383	-	transcript9171.chr1.nic@UCHL5	transcript9171.chr1.nic	protein_coding	193059185,193051754,193049746,193029532,193029388,193029179,193028085,193023844,193022926,193021097,193020307,193018405	193059383,193051817,193049851,193029657,193029449,193029309,193028148,193023946,193023039,193021195,193020381,193018820	Gene ID= ENSG00000116750.13 TPM= 2.12 Transcript Type= NA
chr1	193012250	193059496	193012250	193059496	-	ENST00000367455.8@UCHL5	ENST00000367455.8	protein_coding	193059185,193051754,193049746,193029532,193029388,193029179,193028085,193023844,193022926,193021097,193012250	193059496,193051817,193049851,193029657,193029449,193029309,193028148,193023946,193023039,193021195,193016395	Gene ID= ENSG00000116750.13 TPM= 2.12 Transcript Type= protein_coding
chr1	193015759	193059496	193015759	193059496	-	ENST00000367454.5@UCHL5	ENST00000367454.5	protein_coding	193059185,193051754,193049746,193029532,193029388,193029179,193028085,193023844,193022926,193021097,193015759	193059496,193051817,193049851,193029657,193029449,193029309,193028148,193023946,193023036,193021195,193016395	Gene ID= ENSG00000116750.13 TPM= 10.62 Transcript Type= protein_coding
chr1	193018405	193059409	193018405	193059409	-	ENST00000367449.5@UCHL5	ENST00000367449.5	protein_coding	193059185,193051754,193049746,193029532,193029388,193029179,193028085,193023844,193022926,193021097,193018405	193059409,193051817,193049851,193029657,193029449,193029309,193028148,193023946,193023036,193021195,193018820	Gene ID= ENSG00000116750.13 TPM= 2.12 Transcript Type= protein_coding
chr1	193018405	193059361	193018405	193059361	-	ENST00000367448.5@UCHL5	ENST00000367448.5	protein_coding	193059185,193051754,193049746,193029532,193029388,193029179,193028085,193023844,193022926,193021097,193020307,193018405	193059361,193051817,193049851,193029657,193029449,193029309,193028148,193023946,193023036,193021195,193020381,193018820	Gene ID= ENSG00000116750.13 TPM= 2.12 Transcript Type= protein_coding
chr1	193040087	193043174	193040087	193043174	+	transcript9215.chr1.nnic@NA	transcript9215.chr1.nnic	NA	193040087	193043174	Gene ID= novel_gene_chr1_9216 TPM= 11.68 Transcript Type= NA
chr1	193059562	193084881	193059562	193084881	+	transcript9200.chr1.nic@TROVE2	transcript9200.chr1.nic	protein_coding	193059562,193069034,193070554,193075820,193076501,193076913,193081364,193082186,193082562,193084579	193059776,193069634,193070619,193076040,193076647,193077050,193081480,193082299,193082708,193084881	Gene ID= ENSG00000116747.12 TPM= 2.92 Transcript Type= NA
chr1	193059595	193084881	193059595	193084881	+	transcript9201.chr1.nic@TROVE2	transcript9201.chr1.nic	protein_coding	193059595,193059874,193069034,193075820,193076501,193076913,193081364,193082186,193082562,193084579	193059776,193060222,193069634,193076040,193076647,193077050,193081480,193082299,193082708,193084881	Gene ID= ENSG00000116747.12 TPM= 9.29 Transcript Type= NA
chr1	193059422	193084881	193059422	193084881	+	ENST00000400968.6@TROVE2	ENST00000400968.6	protein_coding	193059422,193069034,193075820,193076501,193076913,193081364,193082186,193082562,193084579	193059776,193069634,193076040,193076647,193077050,193081480,193082299,193082708,193084881	Gene ID= ENSG00000116747.12 TPM= 40.1 Transcript Type= protein_coding
chr1	193059595	193084881	193059595	193084881	+	transcript9207.chr1.nnic@TROVE2	transcript9207.chr1.nnic	protein_coding	193059595,193059874,193075820,193076501,193076913,193081364,193082186,193082562,193084579	193059776,193060222,193076040,193076647,193077050,193081480,193082299,193082708,193084881	Gene ID= ENSG00000116747.12 TPM= 2.92 Transcript Type= NA
chr1	193059454	193091219	193059454	193091219	+	ENST00000432079.5@TROVE2	ENST00000432079.5	protein_coding	193059454,193075820,193076501,193076913,193081364,193082186,193082562,193084579	193059776,193076040,193076647,193077050,193081480,193082299,193082708,193091219	Gene ID= ENSG00000116747.12 TPM= 10.62 Transcript Type= protein_coding
chr1	193089861	193091775	193089861	193091775	+	transcript9221.chr1.nnic@NA	transcript9221.chr1.nnic	NA	193089861	193091775	Gene ID= novel_gene_chr1_9222 TPM= 5.31 Transcript Type= NA
chr1	193096468	193105431	193096468	193105431	-	ENST00000367439.7@GLRX2	ENST00000367439.7	protein_coding	193105264,193101141,193097584,193096468	193105431,193101204,193097760,193096759	Gene ID= ENSG00000023572.8 TPM= 36.11 Transcript Type= protein_coding
chr1	193122021	193233040	193122021	193233040	+	transcript9232.chr1.nic@CDC73	transcript9232.chr1.nic	protein_coding	193122021,193125112,193130174,193135391,193135537,193138085,193141850,193147867,193150304,193152380,193203795,193212065,193212390,193232993	193122331,193125217,193130243,193135453,193135589,193138173,193142066,193147965,193150382,193152444,193203852,193212100,193212477,193233040	Gene ID= ENSG00000134371.10 TPM= 2.12 Transcript Type= NA
chr1	193121993	193162929	193121993	193162929	+	transcript9235.chr1.nnic@CDC73	transcript9235.chr1.nnic	protein_coding	193121993,193125112,193130174,193135391,193135537,193138085,193141850,193147867,193150304,193152380,193161123	193122331,193125217,193130243,193135453,193135589,193138173,193142066,193147965,193150382,193152444,193162929	Gene ID= ENSG00000134371.10 TPM= 12.75 Transcript Type= NA
chr1	193186677	193251425	193186677	193251425	+	transcript9242.chr1.nnic@CDC73	transcript9242.chr1.nnic	protein_coding	193186677,193203795,193212065,193212390,193232993,193236256,193249730,193250676	193186712,193203852,193212100,193212477,193233154,193236356,193249871,193251425	Gene ID= ENSG00000134371.10 TPM= 4.25 Transcript Type= NA
chr1	193122017	193253901	193122017	193253901	+	ENST00000367435.3@CDC73	ENST00000367435.3	protein_coding	193122017,193125112,193130174,193135391,193135537,193138085,193141850,193147867,193150304,193152380,193203795,193212065,193212390,193232993,193236256,193249730,193250676	193122331,193125217,193130243,193135453,193135589,193138173,193142066,193147965,193150382,193152444,193203852,193212100,193212477,193233154,193236356,193249871,193253901	Gene ID= ENSG00000134371.10 TPM= 16.99 Transcript Type= protein_coding
chr1	193179045	193186654	193179045	193186654	-	ENST00000367434.4@B3GALT2	ENST00000367434.4	protein_coding	193186019,193179045	193186654,193181682	Gene ID= ENSG00000162630.5 TPM= 21.24 Transcript Type= protein_coding
chr1	194065591	194069192	194065591	194069192	-	transcript9252.chr1.nnic@NA	transcript9252.chr1.nnic	NA	194065591	194069192	Gene ID= novel_gene_chr1_9253 TPM= 2.12 Transcript Type= NA
chr1	196651878	196747504	196651878	196747504	+	ENST00000367429.8@CFH	ENST00000367429.8	protein_coding	196651878,196672978,196673857,196675989,196677476,196679623,196685064,196689420,196690063,196713735,196715593,196725121,196726470,196726761,196728346,196736824,196737475,196740619,196741875,196743452,196745817,196747111	196652175,196673163,196673962,196676065,196677667,196679793,196685237,196689614,196690239,196713917,196715769,196725297,196726652,196726940,196728522,196737006,196737660,196740792,196742051,196743628,196745999,196747504	Gene ID= ENSG00000000971.15 TPM= 12.75 Transcript Type= protein_coding
chr1	196652045	196701566	196652045	196701566	+	ENST00000630130.2@CFH	ENST00000630130.2	protein_coding	196652045,196672978,196673857,196675989,196677476,196679623,196685064,196689420,196690063,196701318	196652175,196673163,196673962,196676065,196677667,196679793,196685237,196689614,196690239,196701566	Gene ID= ENSG00000000971.15 TPM= 7.44 Transcript Type= protein_coding
chr1	197157865	197201326	197157865	197201326	-	transcript9257.chr1.nnic@ZBTB41	transcript9257.chr1.nnic	protein_coding	197201223,197199354,197191692,197190762,197188292,197180988,197178417,197176564,197175010,197172160,197157865	197201326,197200590,197191899,197190831,197188439,197181117,197178512,197176670,197175115,197172248,197160014	Gene ID= ENSG00000177888.7 TPM= 6.37 Transcript Type= NA
chr1	197509644	197775699	197509644	197775699	-	transcript9265.chr1.nic@DENND1B	transcript9265.chr1.nic	protein_coding	197775540,197772868,197715031,197674120,197672037,197658300,197652235,197647055,197645690,197642711,197617659,197611931,197607073,197595208,197583152,197553022,197546733,197545922,197540959,197539964,197512871,197511728,197509644	197775699,197772932,197715074,197674169,197672156,197658369,197652315,197647114,197645743,197642821,197617759,197611976,197607174,197595333,197583253,197553112,197546773,197545990,197541015,197540071,197512953,197511944,197510972	Gene ID= ENSG00000213047.12 TPM= 3.19 Transcript Type= NA
chr1	197509644	197775603	197509644	197775603	-	transcript9268.chr1.nic@DENND1B	transcript9268.chr1.nic	protein_coding	197775139,197772868,197715031,197674120,197672037,197658300,197652235,197645690,197642711,197617659,197611931,197607073,197595208,197583152,197553022,197546733,197545922,197540959,197539964,197512871,197511728,197509644	197775603,197772932,197715074,197674169,197672156,197658369,197652315,197645743,197642821,197617759,197611976,197607174,197595333,197583253,197553112,197546773,197545990,197541015,197540071,197512953,197511944,197510972	Gene ID= ENSG00000213047.12 TPM= 6.37 Transcript Type= NA
chr1	197509644	197775594	197509644	197775594	-	transcript9269.chr1.nnic@DENND1B	transcript9269.chr1.nnic	protein_coding	197775139,197772868,197735586,197715031,197674120,197672037,197652235,197645690,197642711,197617659,197611931,197607073,197595208,197583152,197553022,197546733,197545922,197540959,197539964,197512871,197511728,197509644	197775594,197772932,197735796,197715074,197674169,197672156,197652315,197645743,197642821,197617759,197611976,197607174,197595333,197583253,197553112,197546773,197545990,197541015,197540071,197512953,197511944,197510972	Gene ID= ENSG00000213047.12 TPM= 2.12 Transcript Type= NA
chr1	197509644	197775597	197509644	197775597	-	transcript9271.chr1.nnic@DENND1B	transcript9271.chr1.nnic	protein_coding	197775139,197772868,197715031,197674120,197672037,197652235,197645690,197642711,197617659,197611931,197607073,197595208,197583152,197553022,197546733,197545922,197540959,197539964,197512871,197511728,197509644	197775597,197772932,197715074,197674169,197672156,197652315,197645743,197642821,197617759,197611976,197607174,197595333,197583253,197553112,197546773,197545990,197541015,197540071,197512953,197511944,197510972	Gene ID= ENSG00000213047.12 TPM= 3.19 Transcript Type= NA
chr1	197902647	197907367	197902647	197907367	+	ENST00000367393.7@C1orf53	ENST00000367393.7	protein_coding	197902647,197905796,197907149	197902913,197905897,197907367	Gene ID= ENSG00000203724.10 TPM= 6.37 Transcript Type= protein_coding
chr1	198156963	198322420	198156963	198322420	+	ENST00000367385.8@NEK7	ENST00000367385.8	protein_coding	198156963,198232553,198253040,198262575,198264125,198277961,198278954,198292945,198297127,198319412	198157276,198232637,198253180,198262637,198264235,198278069,198279061,198293039,198297240,198322420	Gene ID= ENSG00000151414.14 TPM= 497.56 Transcript Type= protein_coding
chr1	198157033	198322420	198157033	198322420	+	transcript9299.chr1.nnic@NEK7	transcript9299.chr1.nnic	protein_coding	198157033,198232553,198253040,198262575,198264125,198277961,198278954,198292945,198319412	198157276,198232637,198253180,198262637,198264235,198278069,198279061,198293039,198322420	Gene ID= ENSG00000151414.14 TPM= 16.61 Transcript Type= NA
chr1	198156960	198322420	198156960	198322420	+	transcript9301.chr1.nnic@NEK7	transcript9301.chr1.nnic	protein_coding	198156960,198232553,198262575,198264125,198277961,198278954,198292945,198297127,198319412	198157276,198232637,198262637,198264235,198278069,198279061,198293039,198297240,198322420	Gene ID= ENSG00000151414.14 TPM= 17.67 Transcript Type= NA
chr1	198156960	198322415	198156960	198322415	+	transcript9307.chr1.nnic@NEK7	transcript9307.chr1.nnic	protein_coding	198156960,198232553,198253040,198262575,198264125,198319412	198157276,198232637,198253180,198262637,198264235,198322415	Gene ID= ENSG00000151414.14 TPM= 33.61 Transcript Type= NA
chr1	200404940	200410056	200404940	200410056	-	ENST00000294740.3@ZNF281	ENST00000294740.3	protein_coding	200409946,200404940	200410056,200409719	Gene ID= ENSG00000162702.7 TPM= 1.06 Transcript Type= protein_coding
chr1	200406708	200410009	200406708	200410009	-	ENST00000367353.1@ZNF281	ENST00000367353.1	protein_coding	200409946,200406708	200410009,200409723	Gene ID= ENSG00000162702.7 TPM= 22.31 Transcript Type= protein_coding
chr1	200640822	200669964	200640822	200669964	-	transcript9327.chr1.nic@DDX59	transcript9327.chr1.nic	protein_coding	200669767,200665937,200663919,200659027,200650425,200649074,200648439,200640822	200669964,200666751,200664086,200659116,200650676,200649226,200648567,200641256	Gene ID= ENSG00000118197.13 TPM= 2.12 Transcript Type= NA
chr1	200644039	200669969	200644039	200669969	-	ENST00000331314.10@DDX59	ENST00000331314.10	protein_coding	200669767,200665937,200663919,200659027,200650425,200649074,200648439,200644039	200669969,200666751,200664086,200659116,200650676,200649226,200648567,200644517	Gene ID= ENSG00000118197.13 TPM= 19.12 Transcript Type= protein_coding
chr1	200738920	200849226	200738920	200849226	+	transcript9333.chr1.nic@CAMSAP2	transcript9333.chr1.nic	protein_coding	200738920,200760839,200807376,200815561,200832200,200832706,200841994,200844782,200847210,200847640,200848032	200739966,200761098,200807537,200815644,200832341,200832845,200842087,200844869,200847292,200847709,200849226	Gene ID= ENSG00000118200.14 TPM= 3.19 Transcript Type= NA
chr1	200739558	200860704	200739558	200860704	+	ENST00000358823.6@CAMSAP2	ENST00000358823.6	protein_coding	200739558,200760839,200807376,200815561,200832200,200832706,200841994,200844782,200847210,200847640,200848032,200852541,200853275,200854817,200856010,200857306,200857754	200739966,200761098,200807537,200815644,200832341,200832845,200842087,200844869,200847292,200847709,200850234,200852677,200853495,200854889,200856125,200857424,200860704	Gene ID= ENSG00000118200.14 TPM= 9.56 Transcript Type= protein_coding
chr1	201134772	201154494	201134772	201154494	-	ENST00000367334.9@TMEM9	ENST00000367334.9	protein_coding	201154445,201153858,201151761,201146740,201143820,201134772	201154494,201153959,201151852,201146848,201143951,201135815	Gene ID= ENSG00000116857.16 TPM= 40.36 Transcript Type= protein_coding
chr1	201134772	201171574	201134772	201171574	-	ENST00000367333.6@TMEM9	ENST00000367333.6	protein_coding	201171490,201153858,201151761,201146740,201143820,201134772	201171574,201153959,201151852,201146848,201143951,201135815	Gene ID= ENSG00000116857.16 TPM= 6.37 Transcript Type= protein_coding
chr1	201359008	201377680	201359008	201377680	-	ENST00000367322.5@TNNT2	ENST00000367322.5	protein_coding	201377623,201373214,201372145,201372027,201368162,201367771,201366838,201365610,201365191,201364298,201363296,201361913,201361279,201359623,201359008	201377680,201373268,201372155,201372041,201368227,201367806,201366871,201365670,201365307,201364375,201363406,201362022,201361369,201359663,201359255	Gene ID= ENSG00000118194.18 TPM= 3260.25 Transcript Type= protein_coding
chr1	201359008	201377680	201359008	201377680	-	ENST00000491504.5@TNNT2	ENST00000491504.5	protein_coding	201377623,201373214,201372145,201372027,201368162,201367771,201365610,201365191,201364298,201363296,201362386,201361913,201361279,201359623,201359008	201377680,201373268,201372155,201372041,201368227,201367806,201366871,201365307,201364375,201363406,201362394,201362022,201361369,201359663,201359255	Gene ID= ENSG00000118194.18 TPM= 189.36 Transcript Type= retained_intron
chr1	201359008	201363350	201359008	201363350	-	ENST00000476888.5@TNNT2	ENST00000476888.5	protein_coding	201363296,201362386,201361951,201361279,201359623,201359008	201363350,201362394,201362022,201361369,201359663,201359255	Gene ID= ENSG00000118194.18 TPM= 136.76 Transcript Type= processed_transcript
chr1	201359019	201377664	201359019	201377664	-	ENST00000421663.6@TNNT2	ENST00000421663.6	protein_coding	201377623,201373209,201368162,201367771,201366838,201365610,201365191,201364298,201363296,201361913,201361279,201359623,201359019	201377664,201373268,201368227,201367806,201366871,201365670,201365307,201364375,201363406,201362022,201361369,201359663,201359255	Gene ID= ENSG00000118194.18 TPM= 507.72 Transcript Type= protein_coding
chr1	201359034	201377762	201359034	201377762	-	ENST00000509001.5@TNNT2	ENST00000509001.5	protein_coding	201377623,201373214,201372145,201372027,201368162,201367771,201366838,201365610,201365191,201364298,201363296,201362386,201361913,201361279,201359623,201359034	201377762,201373401,201372155,201372041,201368227,201367806,201366871,201365670,201365307,201364375,201363406,201362394,201362022,201361369,201359663,201359255	Gene ID= ENSG00000118194.18 TPM= 209.83 Transcript Type= protein_coding
chr1	201359009	201377700	201359009	201377700	-	ENST00000458432.6@TNNT2	ENST00000458432.6	protein_coding	201377623,201373206,201372027,201369816,201368162,201367771,201366838,201365610,201365191,201364298,201363296,201361913,201361279,201359623,201359009	201377700,201373268,201372045,201369845,201368227,201367806,201366871,201365670,201365307,201364375,201363406,201362022,201361369,201359663,201359255	Gene ID= ENSG00000118194.18 TPM= 908.47 Transcript Type= protein_coding
chr1	201359024	201377661	201359024	201377661	-	ENST00000367320.6@TNNT2	ENST00000367320.6	protein_coding	201377623,201373214,201372145,201372027,201369816,201368162,201367771,201366838,201365610,201364298,201363296,201361913,201361279,201359623,201359024	201377661,201373268,201372155,201372041,201369845,201368227,201367803,201366871,201365670,201364375,201363406,201362022,201361369,201359663,201359255	Gene ID= ENSG00000118194.18 TPM= 51.8 Transcript Type= protein_coding
chr1	201359008	201364188	201359008	201364188	-	ENST00000460780.5@TNNT2	ENST00000460780.5	protein_coding	201363296,201362386,201361913,201360453,201359623,201359008	201364188,201362394,201362022,201361369,201359663,201359255	Gene ID= ENSG00000118194.18 TPM= 19.12 Transcript Type= processed_transcript
chr1	201359009	201373254	201359009	201373254	-	ENST00000236918.11@TNNT2	ENST00000236918.11	protein_coding	201373214,201372145,201372027,201369816,201368162,201367771,201366838,201365610,201365191,201364298,201363296,201362386,201361913,201361279,201359623,201359009	201373254,201372155,201372041,201369845,201368227,201367806,201366871,201365670,201365307,201364375,201363406,201362394,201362022,201361369,201359663,201359255	Gene ID= ENSG00000118194.18 TPM= 38.08 Transcript Type= protein_coding
chr1	201363356	201377633	201363356	201377633	-	ENST00000455702.5@TNNT2	ENST00000455702.5	protein_coding	201377623,201373214,201372145,201372027,201369816,201368162,201367771,201366838,201365610,201365191,201364298,201363356	201377633,201373268,201372155,201372041,201369845,201368227,201367806,201366871,201365670,201365307,201364375,201363406	Gene ID= ENSG00000118194.18 TPM= 8.76 Transcript Type= protein_coding
chr1	201363927	201367808	201363927	201367808	-	ENST00000503459.1@TNNT2	ENST00000503459.1	protein_coding	201367771,201366838,201365610,201365191,201363927	201367808,201366871,201365670,201365307,201364375	Gene ID= ENSG00000118194.18 TPM= 7.44 Transcript Type= retained_intron
chr1	201365276	201377664	201365276	201377664	-	ENST00000412633.2@TNNT2	ENST00000412633.2	protein_coding	201377623,201373214,201372145,201372027,201368162,201367771,201366838,201365610,201365276	201377664,201373268,201372155,201372041,201368227,201367803,201366871,201365670,201365307	Gene ID= ENSG00000118194.18 TPM= 24.43 Transcript Type= protein_coding
chr1	201359013	201362728	201359013	201362728	-	transcript9551.chr1.nnic@NA	transcript9551.chr1.nnic	NA	201359013	201362728	Gene ID= novel_gene_chr1_9552 TPM= 56.83 Transcript Type= NA
chr1	201381207	201384037	201381207	201384037	-	transcript9555.chr1.nnic@LAD1	transcript9555.chr1.nnic	protein_coding	201383707,201383317,201383074,201382653,201382252,201381207	201384037,201383389,201383211,201382739,201382326,201381893	Gene ID= ENSG00000159166.13 TPM= 35.05 Transcript Type= NA
chr1	201465494	201469429	201465494	201469429	-	transcript9559.chr1.nnic@PHLDA3	transcript9559.chr1.nnic	protein_coding	201468341,201467486,201465494	201469429,201467583,201466178	Gene ID= ENSG00000174307.6 TPM= 4.25 Transcript Type= NA
chr1	201464383	201469184	201464383	201469184	-	ENST00000367311.4@PHLDA3	ENST00000367311.4	protein_coding	201468341,201464383	201469184,201466178	Gene ID= ENSG00000174307.6 TPM= 4.25 Transcript Type= protein_coding
chr1	201483530	201509456	201483530	201509456	-	ENST00000367306.5@CSRP1	ENST00000367306.5	protein_coding	201509437,201507070,201496192,201490176,201488855,201485283,201483530	201509456,201507412,201496304,201490344,201488984,201485376,201484789	Gene ID= ENSG00000159176.13 TPM= 88.16 Transcript Type= protein_coding
chr1	201507213	201533605	201507213	201533605	+	transcript9568.chr1.nnic@AC096677.1	transcript9568.chr1.nnic	antisense_RNA	201507213,201530094,201533424	201507419,201530175,201533605	Gene ID= ENSG00000224536.2 TPM= 3.19 Transcript Type= NA
chr1	201518222	201531703	201518222	201531703	-	transcript9566.chr1.nnic@NA	transcript9566.chr1.nnic	NA	201531302,201530090,201521908,201518222	201531703,201530179,201522022,201520650	Gene ID= novel_gene_chr1_9567 TPM= 23.37 Transcript Type= NA
chr1	201739858	201803706	201739858	201803706	+	transcript9580.chr1.nic@NAV1	transcript9580.chr1.nic	protein_coding	201739858,201780421,201781012,201782176,201783406,201785310,201786429,201788468,201789740,201790554,201790689,201793792,201794466,201803593	201740076,201780559,201781309,201782869,201783852,201785351,201786577,201788638,201789792,201790577,201790766,201793875,201794577,201803706	Gene ID= ENSG00000134369.15 TPM= 13.28 Transcript Type= NA
chr1	201622927	201823344	201622927	201823344	+	ENST00000367302.5@NAV1	ENST00000367302.5	protein_coding	201622927,201629404,201648634,201712817,201718390,201780421,201781012,201782176,201783406,201785310,201786429,201789740,201790554,201790689,201793792,201794466,201803593,201807953,201808418,201808703,201809164,201809442,201809946,201810523,201811603,201811903,201812465,201813140,201817088,201819837	201623606,201629507,201649425,201712919,201718755,201780559,201781309,201782869,201783852,201785351,201786577,201789792,201790577,201790766,201793875,201794577,201803714,201808149,201808610,201808871,201809261,201809537,201810105,201810758,201811757,201811974,201812661,201813258,201817285,201823344	Gene ID= ENSG00000134369.15 TPM= 35.58 Transcript Type= protein_coding
chr1	201785790	201789322	201785790	201789322	-	transcript9588.chr1.nnic@NA	transcript9588.chr1.nnic	NA	201785790	201789322	Gene ID= novel_gene_chr1_9589 TPM= 46.74 Transcript Type= NA
chr1	201805991	201807850	201805991	201807850	-	transcript9590.chr1.nnic@NA	transcript9590.chr1.nnic	NA	201805991	201807850	Gene ID= novel_gene_chr1_9591 TPM= 4.25 Transcript Type= NA
chr1	201812039	201814218	201812039	201814218	+	transcript9586.chr1.nnic@NA	transcript9586.chr1.nnic	NA	201812039	201814218	Gene ID= novel_gene_chr1_9587 TPM= 2.12 Transcript Type= NA
chr1	201883357	201883777	201883357	201883777	+	transcript9601.chr1.nnic@NA	transcript9601.chr1.nnic	NA	201883357	201883777	Gene ID= novel_gene_chr1_9602 TPM= 2.12 Transcript Type= NA
chr1	201888708	201892306	201888708	201892306	+	ENST00000362011.6@SHISA4	ENST00000362011.6	protein_coding	201888708,201889445,201890454,201891401,201891800	201889067,201889616,201890587,201891568,201892306	Gene ID= ENSG00000198892.6 TPM= 131.71 Transcript Type= protein_coding
chr1	201892207	201893098	201892207	201893098	+	transcript9618.chr1.nnic@NA	transcript9618.chr1.nnic	NA	201892207	201893098	Gene ID= novel_gene_chr1_9619 TPM= 8.5 Transcript Type= NA
chr1	201896452	201946587	201896452	201946587	-	ENST00000367288.4@LMOD1	ENST00000367288.4	protein_coding	201946080,201899237,201896452	201946587,201900751,201898398	Gene ID= ENSG00000163431.12 TPM= 16.99 Transcript Type= protein_coding
chr1	201955475	201970351	201955475	201970351	+	transcript9621.chr1.nnic@TIMM17A	transcript9621.chr1.nnic	protein_coding	201955475,201957281,201957511,201958839,201963616,201965433,201969469	201955552,201957380,201957574,201958908,201963744,201965543,201970351	Gene ID= ENSG00000134375.10 TPM= 6.37 Transcript Type= NA
chr1	201955491	201970661	201955491	201970661	+	ENST00000367287.4@TIMM17A	ENST00000367287.4	protein_coding	201955491,201957281,201957511,201963616,201965433,201969469	201955552,201957380,201957574,201963744,201965543,201970661	Gene ID= ENSG00000134375.10 TPM= 5.31 Transcript Type= protein_coding
chr1	201982624	202006147	201982624	202006147	+	ENST00000295640.8@RNPEP	ENST00000295640.8	protein_coding	201982624,201988904,201989383,201996147,201997319,201999902,202001376,202001659,202003237,202004354,202005558	201983113,201989044,201989531,201996263,201997554,202000015,202001488,202001767,202003461,202004496,202006147	Gene ID= ENSG00000176393.10 TPM= 41.42 Transcript Type= protein_coding
chr1	202010517	202017188	202010517	202017188	+	ENST00000367284.9@ELF3	ENST00000367284.9	protein_coding	202010517,202011129,202011957,202012344,202012640,202012947,202013182,202013829,202015209	202010706,202011299,202012178,202012436,202012759,202013036,202013298,202014024,202017188	Gene ID= ENSG00000163435.15 TPM= 2.12 Transcript Type= protein_coding
chr1	202133404	202144741	202133404	202144741	-	ENST00000272217.6@ARL8A	ENST00000272217.6	protein_coding	202144450,202138368,202137965,202135707,202135459,202135150,202133404	202144741,202138448,202138038,202135800,202135526,202135220,202134516	Gene ID= ENSG00000143862.7 TPM= 98.78 Transcript Type= protein_coding
chr1	202331657	202341980	202331657	202341980	-	ENST00000367274.8@UBE2T	ENST00000367274.8	protein_coding	202341895,202335646,202334989,202333450,202333237,202333010,202331657	202341980,202335818,202335058,202333555,202333335,202333093,202331960	Gene ID= ENSG00000077152.9 TPM= 24.43 Transcript Type= protein_coding
chr1	202348672	202495480	202348672	202495480	+	transcript9646.chr1.nic@PPP1R12B	transcript9646.chr1.nic	protein_coding	202348672,202416787,202422620,202425566,202427040,202428855,202430731,202431480,202434656,202437821,202440706,202442447,202448989,202488533,202493114,202495293	202349142,202416917,202422738,202425725,202427184,202428929,202430810,202431619,202434768,202438024,202440788,202442572,202449171,202488623,202493317,202495480	Gene ID= ENSG00000077157.21 TPM= 12.75 Transcript Type= NA
chr1	202462714	202495480	202462714	202495480	+	transcript9665.chr1.nic@PPP1R12B	transcript9665.chr1.nic	protein_coding	202462714,202488533,202493114,202495293	202463097,202488623,202493317,202495480	Gene ID= ENSG00000077157.21 TPM= 2.12 Transcript Type= NA
chr1	202348720	202438242	202348720	202438242	+	ENST00000480184.5@PPP1R12B	ENST00000480184.5	protein_coding	202348720,202416787,202422620,202425566,202427040,202428855,202430731,202431480,202434656,202437821	202349142,202416917,202422738,202425725,202427184,202428929,202430810,202431619,202434768,202438242	Gene ID= ENSG00000077157.21 TPM= 5.31 Transcript Type= protein_coding
chr1	202467222	202470511	202467222	202470511	-	transcript9673.chr1.nnic@NA	transcript9673.chr1.nnic	NA	202467222	202470511	Gene ID= novel_gene_chr1_9674 TPM= 2.12 Transcript Type= NA
chr1	202573133	202574182	202573133	202574182	+	transcript9669.chr1.nnic@NA	transcript9669.chr1.nnic	NA	202573133	202574182	Gene ID= novel_gene_chr1_9670 TPM= 4.25 Transcript Type= NA
chr1	202581749	202588569	202581749	202588569	+	transcript9667.chr1.nnic@NA	transcript9667.chr1.nnic	NA	202581749	202588569	Gene ID= novel_gene_chr1_9668 TPM= 146.58 Transcript Type= NA
chr1	202602569	202605290	202602569	202605290	+	transcript9678.chr1.nnic@NA	transcript9678.chr1.nnic	NA	202602569	202605290	Gene ID= novel_gene_chr1_9679 TPM= 2.12 Transcript Type= NA
chr1	202724491	202809470	202724491	202809470	-	ENST00000367265.7@KDM5B	ENST00000367265.7	protein_coding	202808102,202777017,202774613,202773118,202766926,202764049,202762699,202760415,202758391,202756358,202755271,202752905,202750659,202748945,202746142,202745858,202742655,202742391,202741367,202740674,202736213,202735429,202733401,202731828,202730909,202729707,202724491	202809470,202777094,202774735,202773288,202767060,202764145,202762808,202760573,202758510,202756516,202755452,202753067,202750778,202749139,202746323,202745982,202742805,202742505,202741722,202740812,202736392,202735587,202733886,202731939,202731063,202730027,202729173	Gene ID= ENSG00000117139.16 TPM= 3.19 Transcript Type= protein_coding
chr1	202810962	202811913	202810962	202811913	+	ENST00000417262.5@PCAT6	ENST00000417262.5	antisense_RNA	202810962,202811575	202811370,202811913	Gene ID= ENSG00000228288.6 TPM= 1.06 Transcript Type= antisense_RNA
chr1	202878957	202889135	202878957	202889135	-	ENST00000367262.3@RABIF	ENST00000367262.3	protein_coding	202888973,202878957	202889135,202881223	Gene ID= ENSG00000183155.4 TPM= 6.37 Transcript Type= protein_coding
chr1	202891100	202927262	202891100	202927262	-	ENST00000367261.7@KLHL12	ENST00000367261.7	protein_coding	202927089,202924968,202919755,202918171,202911054,202909010,202896854,202895522,202894591,202894184,202893239,202891100	202927262,202925207,202919908,202918388,202911203,202909124,202896960,202895717,202894749,202894282,202893425,202892659	Gene ID= ENSG00000117153.15 TPM= 30.8 Transcript Type= protein_coding
chr1	202940826	202958369	202940826	202958369	-	transcript9697.chr1.nic@ADIPOR1	transcript9697.chr1.nic	protein_coding	202958185,202954241,202950930,202948304,202946439,202944983,202943758,202942025,202940826	202958369,202954307,202951164,202948420,202946610,202945169,202943945,202942218,202941701	Gene ID= ENSG00000159346.12 TPM= 46.2 Transcript Type= NA
chr1	202940823	202958389	202940823	202958389	-	ENST00000340990.9@ADIPOR1	ENST00000340990.9	protein_coding	202958185,202950930,202948304,202946439,202944983,202943758,202942025,202940823	202958389,202951164,202948420,202946610,202945169,202943945,202942218,202941701	Gene ID= ENSG00000159346.12 TPM= 312.09 Transcript Type= protein_coding
chr1	202961869	202967280	202961869	202967280	-	ENST00000367249.8@CYB5R1	ENST00000367249.8	protein_coding	202967191,202966749,202966528,202965887,202965371,202964612,202963642,202963066,202961869	202967280,202966898,202966600,202965993,202965500,202964695,202963727,202963165,202962699	Gene ID= ENSG00000159348.12 TPM= 275.1 Transcript Type= protein_coding
chr1	202965639	202967247	202965639	202967247	-	transcript9718.chr1.nnic@NA	transcript9718.chr1.nnic	NA	202965639	202967247	Gene ID= novel_gene_chr1_9719 TPM= 4.25 Transcript Type= NA
chr1	203007374	203023540	203007374	203023540	+	transcript9727.chr1.nnic@TMEM183A	transcript9727.chr1.nnic	protein_coding	203007374,203007774,203008643,203014889,203015960,203018501,203020793,203022855	203007574,203007863,203008810,203015048,203016140,203018561,203020948,203023540	Gene ID= ENSG00000163444.11 TPM= 2.12 Transcript Type= NA
chr1	203007374	203023540	203007374	203023540	+	transcript9730.chr1.nic@TMEM183A	transcript9730.chr1.nic	protein_coding	203007374,203007774,203008643,203014889,203017756,203018481,203020793,203022855	203007574,203007863,203008810,203016140,203017919,203018561,203020948,203023540	Gene ID= ENSG00000163444.11 TPM= 2.12 Transcript Type= NA
chr1	203007396	203023540	203007396	203023540	+	transcript9733.chr1.nic@TMEM183A	transcript9733.chr1.nic	protein_coding	203007396,203008643,203014889,203015960,203018481,203020793,203022855	203007863,203008810,203015048,203016140,203018561,203020948,203023540	Gene ID= ENSG00000163444.11 TPM= 3.19 Transcript Type= NA
chr1	203007386	203024848	203007386	203024848	+	ENST00000367242.3@TMEM183A	ENST00000367242.3	protein_coding	203007386,203007774,203008643,203014889,203015960,203018481,203020793,203022855	203007574,203007863,203008810,203015048,203016140,203018561,203020948,203024848	Gene ID= ENSG00000163444.11 TPM= 12.75 Transcript Type= protein_coding
chr1	203127708	203167405	203127708	203167405	+	ENST00000337894.8@ADORA1	ENST00000337894.8	protein_coding	203127708,203128278,203128785,203165261	203127928,203128432,203129182,203167405	Gene ID= ENSG00000163485.16 TPM= 31.86 Transcript Type= protein_coding
chr1	203178931	203186749	203178931	203186749	-	ENST00000255409.7@CHI3L1	ENST00000255409.7	protein_coding	203186599,203186316,203185184,203184576,203183641,203182731,203181162,203180470,203179761,203178931	203186749,203186345,203185385,203184632,203183791,203182852,203181285,203180652,203179877,203179585	Gene ID= ENSG00000133048.12 TPM= 5.31 Transcript Type= protein_coding
chr1	203178931	203186748	203178931	203186748	-	transcript9752.chr1.nic@CHI3L1	transcript9752.chr1.nic	protein_coding	203186599,203186316,203185184,203184576,203183641,203182731,203179761,203178931	203186748,203186345,203185385,203184632,203183791,203182852,203181285,203179585	Gene ID= ENSG00000133048.12 TPM= 3.19 Transcript Type= NA
chr1	203305536	203309602	203305536	203309602	+	ENST00000290551.4@BTG2	ENST00000290551.4	protein_coding	203305536,203307104	203305748,203309602	Gene ID= ENSG00000159388.5 TPM= 67.98 Transcript Type= protein_coding
chr1	203340628	203351489	203340628	203351489	-	ENST00000354955.4@FMOD	ENST00000354955.4	protein_coding	203351033,203347292,203340628	203351489,203348277,203342494	Gene ID= ENSG00000122176.10 TPM= 121.09 Transcript Type= protein_coding
chr1	203475822	203487161	203475822	203487161	+	transcript9761.chr1.nnic@PRELP	transcript9761.chr1.nnic	protein_coding	203475822,203483169,203486706	203475928,203484157,203487161	Gene ID= ENSG00000188783.5 TPM= 4.25 Transcript Type= NA
chr1	203475828	203491352	203475828	203491352	+	ENST00000343110.2@PRELP	ENST00000343110.2	protein_coding	203475828,203483169,203486706	203475938,203484157,203491352	Gene ID= ENSG00000188783.5 TPM= 33.99 Transcript Type= protein_coding
chr1	203548624	203549925	203548624	203549925	-	transcript9766.chr1.nnic@NA	transcript9766.chr1.nnic	NA	203548624	203549925	Gene ID= novel_gene_chr1_9767 TPM= 2.12 Transcript Type= NA
chr1	203626781	203733632	203626781	203733632	+	transcript9778.chr1.nnic@ATP2B4	transcript9778.chr1.nnic	protein_coding	203626781,203682742,203698157,203699460,203700206,203700798,203703652,203707009,203707862,203709301,203710877,203711960,203713165,203714171,203720549,203721197,203722478,203723881,203727395,203733223	203627219,203683398,203698354,203699717,203700331,203700923,203703813,203707223,203708104,203709542,203711108,203712139,203713252,203714277,203720740,203721410,203722689,203723988,203727571,203733632	Gene ID= ENSG00000058668.14 TPM= 45.14 Transcript Type= NA
chr1	203626561	203744081	203626561	203744081	+	ENST00000357681.9@ATP2B4	ENST00000357681.9	protein_coding	203626561,203682742,203698157,203699460,203700206,203700798,203702044,203703652,203707009,203707862,203709301,203710877,203711960,203713165,203714171,203720549,203721197,203722478,203723881,203727395,203739546	203627219,203683398,203698354,203699717,203700331,203700923,203702079,203703813,203707223,203708104,203709542,203711108,203712139,203713252,203714277,203720740,203721410,203722689,203723988,203727571,203744081	Gene ID= ENSG00000058668.14 TPM= 340.42 Transcript Type= protein_coding
chr1	203725885	203728376	203725885	203728376	-	transcript9791.chr1.nnic@NA	transcript9791.chr1.nnic	NA	203725885	203728376	Gene ID= novel_gene_chr1_9792 TPM= 13.81 Transcript Type= NA
chr1	203795660	203854121	203795660	203854121	+	ENST00000367210.2@ZC3H11A	ENST00000367210.2	protein_coding	203795660,203801575,203816926,203818570,203828299,203829451,203829780,203830123,203831661,203833791,203837966,203840306,203847184,203848331,203849711,203850515,203851057,203852141	203795794,203803016,203817124,203818689,203828422,203829654,203829896,203830203,203831771,203833853,203838064,203840374,203847687,203848407,203850026,203850681,203851124,203854121	Gene ID= ENSG00000058673.16 TPM= 43.55 Transcript Type= protein_coding
chr1	204131062	204152003	204131062	204152003	-	ENST00000367202.8@ETNK2	ENST00000367202.8	protein_coding	204151595,204149703,204146642,204141315,204140035,204137104,204134515,204131062	204152003,204149962,204146764,204141457,204140118,204137249,204134588,204132256	Gene ID= ENSG00000143845.14 TPM= 7.44 Transcript Type= protein_coding
chr1	204403387	204411791	204403387	204411791	-	ENST00000367188.4@PPP1R15B	ENST00000367188.4	protein_coding	204409492,204403387	204411791,204406313	Gene ID= ENSG00000158615.8 TPM= 18.06 Transcript Type= protein_coding
chr1	204441973	204445219	204441973	204445219	+	transcript9817.chr1.nnic@NA	transcript9817.chr1.nnic	NA	204441973	204445219	Gene ID= novel_gene_chr1_9818 TPM= 3.19 Transcript Type= NA
chr1	204466856	204467848	204466856	204467848	+	transcript9815.chr1.nnic@NA	transcript9815.chr1.nnic	NA	204466856	204467848	Gene ID= novel_gene_chr1_9816 TPM= 4.25 Transcript Type= NA
chr1	204516383	204558120	204516383	204558120	+	ENST00000367182.7@MDM4	ENST00000367182.7	protein_coding	204516383,204525484,204526360,204530684,204532191,204537430,204538209,204542784,204544535,204546797,204549113	204516509,204525596,204526434,204530817,204532246,204537497,204538308,204542944,204544684,204546877,204558120	Gene ID= ENSG00000198625.12 TPM= 6.37 Transcript Type= protein_coding
chr1	204516379	204558119	204516379	204558119	+	ENST00000391947.6@MDM4	ENST00000391947.6	protein_coding	204516379,204525484,204526360,204530684,204532191,204538209,204542784,204544535,204546797,204549113	204516509,204525596,204526434,204530817,204532246,204538308,204542944,204544684,204546877,204558119	Gene ID= ENSG00000198625.12 TPM= 7.44 Transcript Type= protein_coding
chr1	204828695	204977139	204828695	204977139	+	ENST00000403080.5@NFASC	ENST00000403080.5	protein_coding	204828695,204920632,204944226,204950557,204952011,204954188,204954829,204957656,204968249,204968798,204970616,204973276,204974179,204974657,204975271,204976671	204828782,204920740,204944406,204950574,204952116,204954384,204954951,204957826,204968360,204968982,204970747,204973419,204974290,204974823,204975418,204977139	Gene ID= ENSG00000163531.15 TPM= 2.12 Transcript Type= protein_coding
chr1	205083129	205084460	205083129	205084460	-	ENST00000367167.4@TMEM81	ENST00000367167.4	protein_coding	205083129	205084460	Gene ID= ENSG00000174529.7 TPM= 1.06 Transcript Type= protein_coding
chr1	205086142	205122015	205086142	205122015	-	ENST00000264515.10@RBBP5	ENST00000264515.10	protein_coding	205121855,205115858,205114789,205105028,205103857,205101600,205100152,205099911,205099741,205098989,205097326,205096682,205094873,205086142	205122015,205115883,205114961,205105168,205104019,205101709,205100271,205100064,205099812,205099106,205097395,205096911,205095064,205088815	Gene ID= ENSG00000117222.13 TPM= 11.68 Transcript Type= protein_coding
chr1	205302059	205321791	205302059	205321791	-	ENST00000367157.4@NUAK2	ENST00000367157.4	protein_coding	205321398,205311705,205308581,205308165,205306188,205305199,205302059	205321791,205311825,205308732,205308230,205306307,205305331,205304513	Gene ID= ENSG00000163545.8 TPM= 1.06 Transcript Type= protein_coding
chr1	205504556	205532793	205504556	205532793	+	transcript9864.chr1.nic@CDK18	transcript9864.chr1.nic	protein_coding	205504556,205523147,205523483,205524232,205525139,205526065,205526367,205526775,205527794,205528048,205528999,205529324,205529521,205530259,205530628,205531344	205504878,205523297,205523715,205524357,205525195,205526179,205526461,205526837,205527917,205528168,205529096,205529429,205529563,205530349,205530705,205532793	Gene ID= ENSG00000117266.15 TPM= 100.55 Transcript Type= NA
chr1	205504667	205527500	205504667	205527500	+	transcript9875.chr1.nic@CDK18	transcript9875.chr1.nic	protein_coding	205504667,205523147,205524232,205525139,205526065,205526367,205526775	205504878,205523625,205524357,205525195,205526179,205526461,205527500	Gene ID= ENSG00000117266.15 TPM= 5.84 Transcript Type= NA
chr1	205504599	205532793	205504599	205532793	+	ENST00000360066.6@CDK18	ENST00000360066.6	protein_coding	205504599,205523147,205523483,205524232,205525139,205526065,205526367,205526775,205527794,205528048,205528999,205529324,205529521,205530259,205530628,205531344	205504878,205523297,205523625,205524357,205525195,205526179,205526461,205526837,205527917,205528168,205529096,205529429,205529563,205530349,205530705,205532793	Gene ID= ENSG00000117266.15 TPM= 147.29 Transcript Type= protein_coding
chr1	205527410	205532793	205527410	205532793	+	ENST00000489617.5@CDK18	ENST00000489617.5	protein_coding	205527410,205528048,205528999,205529324,205529521,205530628,205531344	205527917,205528168,205529096,205529429,205530349,205530705,205532793	Gene ID= ENSG00000117266.15 TPM= 69.75 Transcript Type= retained_intron
chr1	205506143	205507480	205506143	205507480	+	transcript9885.chr1.nnic@NA	transcript9885.chr1.nnic	NA	205506143	205507480	Gene ID= novel_gene_chr1_9886 TPM= 2.12 Transcript Type= NA
chr1	205515175	205517833	205515175	205517833	-	transcript9887.chr1.nnic@NA	transcript9887.chr1.nnic	NA	205515175	205517833	Gene ID= novel_gene_chr1_9888 TPM= 60.54 Transcript Type= NA
chr1	205539115	205539927	205539115	205539927	+	transcript9889.chr1.nnic@NA	transcript9889.chr1.nnic	NA	205539115	205539927	Gene ID= novel_gene_chr1_9890 TPM= 3.19 Transcript Type= NA
chr1	205607943	205631962	205607943	205631962	-	ENST00000357992.8@ELK4	ENST00000357992.8	protein_coding	205631632,205623676,205619966,205618957,205607943	205631962,205623891,205620838,205619073,205616644	Gene ID= ENSG00000158711.13 TPM= 64.79 Transcript Type= protein_coding
chr1	205712819	205750276	205712819	205750276	-	ENST00000367142.4@NUCKS1	ENST00000367142.4	protein_coding	205749957,205729572,205727700,205723926,205720501,205719527,205712819	205750276,205729621,205727805,205723981,205720653,205719676,205718479	Gene ID= ENSG00000069275.12 TPM= 114.71 Transcript Type= protein_coding
chr1	205767986	205775446	205767986	205775446	-	ENST00000367139.7@RAB29	ENST00000367139.7	protein_coding	205775273,205774833,205772496,205771472,205770733,205767986	205775446,205775086,205772567,205771653,205770854,205770453	Gene ID= ENSG00000117280.12 TPM= 4.78 Transcript Type= protein_coding
chr1	205769437	205775479	205769437	205775479	-	transcript9911.chr1.nnic@RAB29	transcript9911.chr1.nnic	protein_coding	205775402,205774833,205772496,205771472,205770733,205769437	205775479,205775086,205772567,205771653,205770854,205770453	Gene ID= ENSG00000117280.12 TPM= 3.19 Transcript Type= NA
chr1	205767986	205775474	205767986	205775474	-	transcript9913.chr1.nnic@RAB29	transcript9913.chr1.nnic	protein_coding	205775402,205772496,205771472,205770733,205767986	205775474,205772567,205771653,205770854,205770453	Gene ID= ENSG00000117280.12 TPM= 4.78 Transcript Type= NA
chr1	205769437	205775449	205769437	205775449	-	ENST00000235932.8@RAB29	ENST00000235932.8	protein_coding	205775374,205774833,205772496,205771472,205770733,205769437	205775449,205775086,205772567,205771653,205770854,205770453	Gene ID= ENSG00000117280.12 TPM= 22.31 Transcript Type= protein_coding
chr1	205789094	205813033	205789094	205813033	-	transcript9930.chr1.nic@SLC41A1	transcript9930.chr1.nic	protein_coding	205812808,205810070,205800953,205799759,205797904,205796924,205795344,205794870,205789094	205813033,205811087,205801060,205799830,205799101,205797003,205795478,205795018,205791718	Gene ID= ENSG00000133065.10 TPM= 49.39 Transcript Type= NA
chr1	205807651	205813161	205807651	205813161	-	transcript9939.chr1.nic@SLC41A1	transcript9939.chr1.nic	protein_coding	205812808,205807651	205813161,205811087	Gene ID= ENSG00000133065.10 TPM= 14.87 Transcript Type= NA
chr1	205789093	205813176	205789093	205813176	-	ENST00000367137.3@SLC41A1	ENST00000367137.3	protein_coding	205812808,205810070,205800953,205799759,205798957,205798669,205797904,205796924,205795344,205794870,205789093	205813176,205811087,205801060,205799830,205799101,205798815,205798051,205797003,205795478,205795018,205791718	Gene ID= ENSG00000133065.10 TPM= 206.59 Transcript Type= protein_coding
chr1	205790154	205791138	205790154	205791138	+	transcript9937.chr1.nnic@NA	transcript9937.chr1.nnic	NA	205790154,205790758	205790727,205791138	Gene ID= novel_gene_chr1_9938 TPM= 18.06 Transcript Type= NA
chr1	205813350	205815240	205813350	205815240	+	transcript9945.chr1.nnic@NA	transcript9945.chr1.nnic	NA	205813350	205815240	Gene ID= novel_gene_chr1_9946 TPM= 2.12 Transcript Type= NA
chr1	205828022	205850117	205828022	205850117	-	ENST00000367136.4@PM20D1	ENST00000367136.4	protein_coding	205849904,205847885,205845325,205844811,205844087,205843667,205842676,205842154,205841811,205840252,205832598,205830280,205828022	205850117,205847971,205845557,205844897,205844217,205843786,205842751,205842215,205841889,205840323,205832766,205830379,205828743	Gene ID= ENSG00000162877.12 TPM= 1.06 Transcript Type= protein_coding
chr1	205913048	205920368	205913048	205920368	-	transcript9950.chr1.nic@SLC26A9	transcript9950.chr1.nic	protein_coding	205920176,205918840,205917283,205913048	205920368,205918985,205917354,205915404	Gene ID= ENSG00000174502.18 TPM= 11.33 Transcript Type= NA
chr1	205913048	205917599	205913048	205917599	-	transcript9951.chr1.nnic@SLC26A9	transcript9951.chr1.nnic	protein_coding	205917504,205917283,205913048	205917599,205917354,205915404	Gene ID= ENSG00000174502.18 TPM= 7.08 Transcript Type= NA
chr1	205913048	205917401	205913048	205917401	-	transcript9952.chr1.nic@SLC26A9	transcript9952.chr1.nic	protein_coding	205917283,205913048	205917401,205915404	Gene ID= ENSG00000174502.18 TPM= 7.08 Transcript Type= NA
chr1	206557165	206589267	206557165	206589267	+	ENST00000577571.5@RASSF5	ENST00000577571.5	protein_coding	206557165,206583269,206584387,206585180,206586826	206557693,206583379,206584684,206585295,206589267	Gene ID= ENSG00000266094.7 TPM= 13.81 Transcript Type= protein_coding
chr1	206591642	206612502	206591642	206612502	-	transcript9966.chr1.nnic@EIF2D	transcript9966.chr1.nnic	protein_coding	206612287,206611184,206609376,206608236,206605400,206602951,206602336,206600263,206599733,206599003,206597100,206595718,206593619,206591642	206612502,206611374,206609459,206608326,206605507,206603204,206602453,206600308,206599836,206599092,206597195,206595838,206593793,206591845	Gene ID= ENSG00000143486.15 TPM= 7.65 Transcript Type= NA
chr1	206591642	206612502	206591642	206612502	-	transcript9969.chr1.nnic@EIF2D	transcript9969.chr1.nnic	protein_coding	206612287,206611184,206609376,206608236,206600263,206599733,206599463,206599003,206597100,206595718,206593619,206591642	206612502,206611374,206609459,206608326,206600308,206599836,206599612,206599092,206597195,206595838,206593793,206591845	Gene ID= ENSG00000143486.15 TPM= 7.65 Transcript Type= NA
chr1	206591642	206612502	206591642	206612502	-	transcript9970.chr1.nnic@EIF2D	transcript9970.chr1.nnic	protein_coding	206612287,206611184,206609376,206608236,206605400,206600263,206599733,206599003,206597100,206595718,206593619,206591642	206612502,206611374,206609459,206608326,206605507,206600308,206599836,206599092,206597195,206595838,206593793,206591845	Gene ID= ENSG00000143486.15 TPM= 4.46 Transcript Type= NA
chr1	206594040	206612502	206594040	206612502	-	transcript9976.chr1.nic@EIF2D	transcript9976.chr1.nic	protein_coding	206612287,206611184,206609376,206608236,206605400,206600263,206599003,206597100,206594040	206612502,206611374,206609459,206608326,206605507,206600308,206599092,206597195,206595838	Gene ID= ENSG00000143486.15 TPM= 2.12 Transcript Type= NA
chr1	206591642	206612459	206591642	206612459	-	ENST00000367114.7@EIF2D	ENST00000367114.7	protein_coding	206612287,206611184,206609376,206608236,206605400,206600263,206599733,206599463,206599003,206597100,206595718,206593619,206591642	206612459,206611374,206609459,206608326,206605507,206600308,206599836,206599612,206599092,206597195,206595838,206593793,206591845	Gene ID= ENSG00000143486.15 TPM= 11.9 Transcript Type= protein_coding
chr1	206591642	206612459	206591642	206612459	-	ENST00000271764.6@EIF2D	ENST00000271764.6	protein_coding	206612287,206611184,206609376,206608236,206605400,206602951,206602336,206600263,206599733,206599463,206599003,206597100,206595718,206593619,206591642	206612459,206611374,206609459,206608326,206605507,206603204,206602453,206600308,206599836,206599612,206599092,206597195,206595838,206593793,206591845	Gene ID= ENSG00000143486.15 TPM= 17.21 Transcript Type= protein_coding
chr1	206635536	206649193	206635536	206649193	+	ENST00000367109.6@DYRK3	ENST00000367109.6	protein_coding	206635536,206637650,206647388	206635780,206637761,206649193	Gene ID= ENSG00000143479.15 TPM= 5.84 Transcript Type= protein_coding
chr1	206635579	206649197	206635579	206649197	+	ENST00000367108.7@DYRK3	ENST00000367108.7	protein_coding	206635579,206636875,206637650,206647388	206635780,206636968,206637761,206649197	Gene ID= ENSG00000143479.15 TPM= 1.59 Transcript Type= protein_coding
chr1	206684425	206685986	206684425	206685986	-	transcript9993.chr1.nnic@NA	transcript9993.chr1.nnic	NA	206684425	206685986	Gene ID= novel_gene_chr1_9994 TPM= 3.19 Transcript Type= NA
chr1	206685037	206734283	206685037	206734283	+	ENST00000367103.3@MAPKAPK2	ENST00000367103.3	protein_coding	206685037,206728710,206729035,206729396,206729972,206730688,206731138,206731640,206731839,206732575	206685508,206728849,206729099,206729475,206730098,206730763,206731262,206731725,206731919,206734283	Gene ID= ENSG00000162889.10 TPM= 161.45 Transcript Type= protein_coding
chr1	206695480	206698694	206695480	206698694	-	transcript9989.chr1.nnic@NA	transcript9989.chr1.nnic	NA	206695480	206698694	Gene ID= novel_gene_chr1_9990 TPM= 7.44 Transcript Type= NA
chr1	206715606	206717998	206715606	206717998	-	transcript9991.chr1.nnic@NA	transcript9991.chr1.nnic	NA	206715606	206717998	Gene ID= novel_gene_chr1_9992 TPM= 3.19 Transcript Type= NA
chr1	206719294	206722384	206719294	206722384	+	transcript9987.chr1.nnic@NA	transcript9987.chr1.nnic	NA	206719294	206722384	Gene ID= novel_gene_chr1_9988 TPM= 2.12 Transcript Type= NA
chr1	206904386	206921998	206904386	206921998	-	ENST00000367091.7@FCMR	ENST00000367091.7	protein_coding	206921818,206913759,206912929,206911730,206910210,206909725,206909462,206904386	206921998,206914094,206913042,206911952,206910340,206909868,206909520,206905147	Gene ID= ENSG00000162894.11 TPM= 1.06 Transcript Type= protein_coding
chr1	206904385	206909917	206904385	206909917	-	transcript9996.chr1.nnic@FCMR	transcript9996.chr1.nnic	protein_coding	206909725,206904385	206909917,206905147	Gene ID= ENSG00000162894.11 TPM= 2.12 Transcript Type= NA
chr1	207043849	207051077	207043849	207051077	-	ENST00000315927.8@YOD1	ENST00000315927.8	protein_coding	207050688,207043849	207051077,207049723	Gene ID= ENSG00000180667.10 TPM= 3.19 Transcript Type= protein_coding
chr1	207053242	207080956	207053242	207080956	+	transcript10000.chr1.nnic@PFKFB2	transcript10000.chr1.nnic	protein_coding	207053242,207054701,207061953,207062620,207063143,207063347,207063773,207065036,207067499,207068163,207069424,207070280,207071188,207071509,207072204,207078954	207053366,207054802,207062078,207062716,207063209,207063421,207063829,207065160,207067706,207068309,207069528,207070409,207071250,207071573,207072395,207080956	Gene ID= ENSG00000123836.14 TPM= 4.25 Transcript Type= NA
chr1	207053260	207077823	207053260	207077823	+	ENST00000367080.7@PFKFB2	ENST00000367080.7	protein_coding	207053260,207054701,207061953,207062620,207063143,207063347,207063773,207065036,207067499,207068163,207069424,207070280,207071188,207071509,207072204	207053366,207054802,207062078,207062716,207063209,207063421,207063829,207065160,207067706,207068309,207069528,207070409,207071250,207071573,207077823	Gene ID= ENSG00000123836.14 TPM= 9.56 Transcript Type= protein_coding
chr1	207053311	207081024	207053311	207081024	+	ENST00000367079.3@PFKFB2	ENST00000367079.3	protein_coding	207053311,207054701,207061953,207062620,207063143,207063347,207063773,207065036,207067499,207068163,207069424,207070280,207071188,207071509,207078954	207053366,207054802,207062078,207062716,207063209,207063421,207063829,207065160,207067706,207068309,207069528,207070409,207071250,207071573,207081024	Gene ID= ENSG00000123836.14 TPM= 5.31 Transcript Type= protein_coding
chr1	207321532	207340766	207321532	207340766	+	ENST00000367063.6@CD55	ENST00000367063.6	protein_coding	207321532,207322382,207324559,207325622,207326752,207331108,207336693,207337329,207339397,207340391	207321865,207322567,207324750,207325721,207326837,207331296,207336818,207337409,207339417,207340766	Gene ID= ENSG00000196352.14 TPM= 12.75 Transcript Type= protein_coding
chr1	207321701	207360501	207321701	207360501	+	ENST00000314754.12@CD55	ENST00000314754.12	protein_coding	207321701,207322382,207324559,207325622,207326752,207331108,207336693,207337329,207339397,207340391,207359546	207321865,207322567,207324750,207325721,207326837,207331296,207336818,207337409,207339417,207340508,207360501	Gene ID= ENSG00000196352.14 TPM= 11.68 Transcript Type= protein_coding
chr1	207752057	207795513	207752057	207795513	+	ENST00000357714.5@CD46	ENST00000357714.5	protein_coding	207752057,207757014,207757540,207759639,207761249,207767013,207770321,207783292,207785071,207785619,207793519	207752309,207757202,207757642,207759724,207761446,207767195,207770362,207783330,207785106,207785682,207795513	Gene ID= ENSG00000117335.19 TPM= 36.91 Transcript Type= protein_coding
chr1	207752057	207795513	207752057	207795513	+	ENST00000367041.5@CD46	ENST00000367041.5	protein_coding	207752057,207757014,207757540,207759639,207761249,207767013,207770321,207783292,207785071,207785619,207790253,207793519	207752309,207757202,207757642,207759724,207761446,207767195,207770362,207783330,207785106,207785682,207790345,207795513	Gene ID= ENSG00000117335.19 TPM= 47 Transcript Type= protein_coding
chr1	207752057	207795513	207752057	207795513	+	ENST00000367042.5@CD46	ENST00000367042.5	protein_coding	207752057,207757014,207757540,207759639,207761249,207767013,207767779,207770321,207783292,207785071,207785619,207790253,207793519	207752309,207757202,207757642,207759724,207761446,207767195,207767823,207770362,207783330,207785106,207785682,207790345,207795513	Gene ID= ENSG00000117335.19 TPM= 16.73 Transcript Type= protein_coding
chr1	207752057	207795513	207752057	207795513	+	ENST00000354848.5@CD46	ENST00000354848.5	protein_coding	207752057,207757014,207757540,207759639,207761249,207767013,207767779,207770321,207783292,207785071,207785619,207793519	207752309,207757202,207757642,207759724,207761446,207767195,207767823,207770362,207783330,207785106,207785682,207795513	Gene ID= ENSG00000117335.19 TPM= 9.82 Transcript Type= protein_coding
chr1	207754858	207759159	207754858	207759159	-	transcript10036.chr1.nnic@NA	transcript10036.chr1.nnic	NA	207754858	207759159	Gene ID= novel_gene_chr1_10037 TPM= 2.12 Transcript Type= NA
chr1	207880972	207911402	207880972	207911402	-	ENST00000310833.11@CD34	ENST00000310833.11	protein_coding	207911002,207899821,207898973,207897493,207889465,207889161,207888682,207880972	207911402,207900003,207899226,207897573,207889621,207889213,207888846,207887923	Gene ID= ENSG00000174059.16 TPM= 27.62 Transcript Type= protein_coding
chr1	207886539	207911402	207886539	207911402	-	ENST00000356522.4@CD34	ENST00000356522.4	protein_coding	207911002,207899821,207898973,207897493,207889465,207889161,207888682,207886539	207911402,207900003,207899226,207897573,207889621,207889213,207888846,207888118	Gene ID= ENSG00000174059.16 TPM= 27.62 Transcript Type= protein_coding
chr1	208209987	208244378	208209987	208244378	-	transcript10051.chr1.nic@PLXNA2	transcript10051.chr1.nic	protein_coding	208243643,208216735,208209987	208244378,208218002,208210462	Gene ID= ENSG00000076356.6 TPM= 5.31 Transcript Type= NA
chr1	208022242	208244320	208022242	208244320	-	ENST00000367033.3@PLXNA2	ENST00000367033.3	protein_coding	208243643,208216735,208210280,208142329,208103147,208098846,208096730,208096029,208092786,208084380,208082412,208079260,208060686,208054421,208052327,208051256,208051009,208045878,208045067,208044508,208043061,208042098,208039992,208039621,208038825,208038371,208034493,208033319,208031590,208028830,208028009,208022242	208244320,208218002,208210462,208142463,208103247,208098969,208096883,208096125,208092900,208084580,208082508,208079450,208060837,208054538,208052463,208051423,208051102,208046117,208045210,208044742,208043203,208042366,208040058,208039767,208038984,208038474,208034592,208033509,208031759,208029042,208028159,208027338	Gene ID= ENSG00000076356.6 TPM= 8.5 Transcript Type= protein_coding
chr1	208235881	208239166	208235881	208239166	+	transcript10052.chr1.nnic@NA	transcript10052.chr1.nnic	NA	208235881	208239166	Gene ID= novel_gene_chr1_10053 TPM= 3.19 Transcript Type= NA
chr1	209614875	209618894	209614875	209618894	-	transcript10056.chr1.nic@LAMB3	transcript10056.chr1.nic	protein_coding	209618452,209617907,209617410,209616471,209614875	209618894,209618048,209617586,209616624,209615407	Gene ID= ENSG00000196878.14 TPM= 12.75 Transcript Type= NA
chr1	209675420	209676388	209675420	209676388	+	ENST00000367029.4@G0S2	ENST00000367029.4	protein_coding	209675420,209675653	209675549,209676388	Gene ID= ENSG00000123689.5 TPM= 1036.67 Transcript Type= protein_coding
chr1	209686180	209734949	209686180	209734949	+	ENST00000367028.6@HSD11B1	ENST00000367028.6	protein_coding	209686180,209704895,209705811,209706709,209706943,209732436,209734304	209686285,209705030,209705941,209706820,209707128,209732579,209734949	Gene ID= ENSG00000117594.9 TPM= 2.66 Transcript Type= protein_coding
chr1	209704846	209734950	209704846	209734950	+	ENST00000367027.4@HSD11B1	ENST00000367027.4	protein_coding	209704846,209705811,209706709,209706943,209732436,209734304	209705030,209705941,209706820,209707128,209732579,209734950	Gene ID= ENSG00000117594.9 TPM= 2.66 Transcript Type= protein_coding
chr1	209788253	209805548	209788253	209805548	-	transcript10069.chr1.nnic@IRF6	transcript10069.chr1.nnic	protein_coding	209805497,209801972,209801240,209796348,209795290,209792269,209790495,209789667,209788253	209805548,209802043,209801416,209796552,209795418,209792427,209790887,209789785,209788644	Gene ID= ENSG00000117595.10 TPM= 2.43 Transcript Type= NA
chr1	209788253	209806174	209788253	209806174	-	transcript10071.chr1.nnic@IRF6	transcript10071.chr1.nnic	protein_coding	209806109,209801972,209801240,209796348,209795290,209792269,209790495,209789667,209788253	209806174,209802043,209801416,209796552,209795418,209792427,209790887,209789785,209788644	Gene ID= ENSG00000117595.10 TPM= 4.56 Transcript Type= NA
chr1	209785691	209802162	209785691	209802162	-	transcript10073.chr1.nic@IRF6	transcript10073.chr1.nic	protein_coding	209801972,209801240,209796348,209795290,209792269,209790495,209789667,209785691	209802162,209801416,209796552,209795418,209792427,209790887,209789785,209788644	Gene ID= ENSG00000117595.10 TPM= 3.49 Transcript Type= NA
chr1	209785691	209806044	209785691	209806044	-	ENST00000367021.7@IRF6	ENST00000367021.7	protein_coding	209805947,209801972,209801240,209796348,209795290,209792269,209790495,209789667,209785691	209806044,209802043,209801416,209796552,209795418,209792427,209790887,209789785,209788644	Gene ID= ENSG00000117595.10 TPM= 9.87 Transcript Type= protein_coding
chr1	210231456	210232972	210231456	210232972	-	ENST00000475406.5@SERTAD4-AS1	ENST00000475406.5	antisense_RNA	210232698,210231456	210232972,210231771	Gene ID= ENSG00000203706.8 TPM= 1.06 Transcript Type= antisense_RNA
chr1	211259403	211298857	211259403	211298857	+	transcript10104.chr1.nic@RCOR3	transcript10104.chr1.nic	protein_coding	211259403,211260108,211271232,211274210,211276257,211278117,211279238,211289178,211295676	211259726,211260164,211271309,211274262,211276418,211278241,211279316,211289396,211298857	Gene ID= ENSG00000117625.13 TPM= 2.47 Transcript Type= NA
chr1	211259354	211261202	211259354	211261202	+	transcript10108.chr1.nnic@RCOR3	transcript10108.chr1.nnic	protein_coding	211259354,211260108,211260866	211259726,211260164,211261202	Gene ID= ENSG00000117625.13 TPM= 3.19 Transcript Type= NA
chr1	211259279	211314591	211259279	211314591	+	ENST00000367006.8@RCOR3	ENST00000367006.8	protein_coding	211259279,211260108,211271232,211274210,211276257,211278117,211279238,211289178,211295676,211304083,211313424	211259726,211260164,211271309,211274262,211276418,211278241,211279316,211289396,211295753,211304140,211314591	Gene ID= ENSG00000117625.13 TPM= 6.19 Transcript Type= protein_coding
chr1	211259388	211313298	211259388	211313298	+	ENST00000452621.6@RCOR3	ENST00000452621.6	protein_coding	211259388,211260108,211271232,211274210,211276257,211278117,211279238,211289178,211295676,211304083,211312720	211259726,211260164,211271309,211274262,211276418,211278241,211279316,211289396,211295753,211304140,211313298	Gene ID= ENSG00000117625.13 TPM= 20 Transcript Type= protein_coding
chr1	211300073	211303102	211300073	211303102	-	transcript10110.chr1.nnic@NA	transcript10110.chr1.nnic	NA	211300073	211303102	Gene ID= novel_gene_chr1_10111 TPM= 7.44 Transcript Type= NA
chr1	211326837	211374946	211326837	211374946	+	ENST00000261464.9@TRAF5	ENST00000261464.9	protein_coding	211326837,211353239,211354410,211356367,211359912,211360702,211361088,211365376,211369452,211371302,211372128	211326889,211353457,211354467,211356468,211360076,211360779,211361162,211365468,211369592,211371470,211374946	Gene ID= ENSG00000082512.14 TPM= 1.06 Transcript Type= protein_coding
chr1	211747428	211749440	211747428	211749440	-	transcript10132.chr1.nnic@NA	transcript10132.chr1.nnic	NA	211747428	211749440	Gene ID= novel_gene_chr1_10133 TPM= 4.25 Transcript Type= NA
chr1	211940401	212035542	211940401	212035542	-	ENST00000366994.7@INTS7	ENST00000366994.7	protein_coding	212035344,212021083,212020122,212016886,212011375,212007250,212006639,211987886,211982676,211981093,211978272,211976582,211975166,211968513,211967878,211966430,211952569,211946607,211944784,211940401	212035542,212021212,212020268,212017023,212011421,212007449,212006761,211988003,211982810,211981190,211978511,211976719,211975372,211968707,211967981,211966498,211952701,211946705,211944969,211942111	Gene ID= ENSG00000143493.12 TPM= 4.25 Transcript Type= protein_coding
chr1	212051524	212052006	212051524	212052006	-	ENST00000401418.2@RPL21P28	ENST00000401418.2	processed_pseudogene	212051524	212052006	Gene ID= ENSG00000220749.4 TPM= 30.8 Transcript Type= processed_pseudogene
chr1	212285477	212361863	212285477	212361863	+	transcript10145.chr1.nnic@PPP2R5A	transcript10145.chr1.nnic	protein_coding	212285477,212333497,212342188,212345803,212347347,212348389,212349189,212356626,212356950,212357157,212358686,212360638	212286291,212333598,212342280,212345933,212347406,212348497,212349242,212356676,212357069,212357284,212358787,212361863	Gene ID= ENSG00000066027.11 TPM= 3.19 Transcript Type= NA
chr1	212285537	212361863	212285537	212361863	+	ENST00000261461.6@PPP2R5A	ENST00000261461.6	protein_coding	212285537,212329135,212333497,212342188,212345803,212347347,212348389,212349189,212356626,212356950,212357157,212358686,212360638	212286291,212329331,212333598,212342280,212345933,212347406,212348497,212349242,212356676,212357069,212357284,212358787,212361863	Gene ID= ENSG00000066027.11 TPM= 55.23 Transcript Type= protein_coding
chr1	212363931	212414895	212363931	212414895	-	ENST00000261455.8@TMEM206	ENST00000261455.8	protein_coding	212414722,212410425,212386891,212385274,212379895,212377562,212375193,212363931	212414895,212410521,212387100,212385425,212380037,212377706,212375300,212365376	Gene ID= ENSG00000065600.12 TPM= 2.12 Transcript Type= protein_coding
chr1	212432887	212446379	212432887	212446379	+	ENST00000366988.4@NENF	ENST00000366988.4	protein_coding	212432887,212442565,212444339,212445830	212433120,212442625,212444442,212446379	Gene ID= ENSG00000117691.9 TPM= 21.24 Transcript Type= protein_coding
chr1	212608670	212620777	212608670	212620777	+	ENST00000341491.8@ATF3	ENST00000341491.8	protein_coding	212608670,212615018,212618127,212619358	212608930,212615261,212618234,212620777	Gene ID= ENSG00000162772.16 TPM= 9.56 Transcript Type= protein_coding
chr1	212686418	212699985	212686418	212699985	-	ENST00000243440.1@BATF3	ENST00000243440.1	protein_coding	212699673,212696961,212686418	212699985,212697065,212686979	Gene ID= ENSG00000123685.8 TPM= 2.12 Transcript Type= protein_coding
chr1	212791828	212815597	212791828	212815597	+	ENST00000532324.5@TATDN3	ENST00000532324.5	protein_coding	212791828,212795095,212796517,212797112,212802701,212804320,212804596,212807736,212812227,212815013	212791987,212795127,212796590,212797196,212802763,212804429,212804651,212807848,212812328,212815597	Gene ID= ENSG00000203705.10 TPM= 1.06 Transcript Type= protein_coding
chr1	212791828	212816626	212791828	212816626	+	ENST00000366974.8@TATDN3	ENST00000366974.8	protein_coding	212791828,212795095,212796517,212797112,212802701,212804320,212804596,212807736,212812248,212815013	212791987,212795127,212796590,212797196,212802763,212804429,212804651,212807848,212812328,212816626	Gene ID= ENSG00000203705.10 TPM= 20.71 Transcript Type= protein_coding
chr1	212791884	212816617	212791884	212816617	+	ENST00000366973.8@TATDN3	ENST00000366973.8	protein_coding	212791884,212795095,212796517,212797112,212802701,212804320,212804596,212807736,212812251,212815013	212791987,212795127,212796590,212797196,212802763,212804429,212804651,212807848,212812328,212816617	Gene ID= ENSG00000203705.10 TPM= 9.03 Transcript Type= protein_coding
chr1	212856604	212858088	212856604	212858088	-	ENST00000426161.5@FLVCR1-AS1	ENST00000426161.5	lincRNA	212857766,212856604	212858088,212857172	Gene ID= ENSG00000198468.7 TPM= 3.19 Transcript Type= lincRNA
chr1	212994729	213015506	212994729	213015506	-	transcript10199.chr1.nic@ANGEL2	transcript10199.chr1.nic	protein_coding	213015226,213013093,213008210,213007129,213005033,213000786,213000326,212997155,212994729	213015506,213013418,213008466,213007198,213005454,213000912,213000383,212997318,212995192	Gene ID= ENSG00000174606.13 TPM= 3.19 Transcript Type= NA
chr1	212992182	213015826	212992182	213015826	-	ENST00000366962.7@ANGEL2	ENST00000366962.7	protein_coding	213015613,213013093,213008210,213007129,213005033,213000786,213000326,212997155,212992182	213015826,213013418,213008466,213007198,213005454,213000912,213000383,212997318,212995192	Gene ID= ENSG00000174606.13 TPM= 5.31 Transcript Type= protein_coding
chr1	213051241	213273464	213051241	213273464	+	transcript10212.chr1.nic@RPS6KC1	transcript10212.chr1.nic	protein_coding	213051241,213071006,213077696,213104454,213117317,213129527,213167858,213230497,213232123,213240702,213242569,213261558,213262721,213272524	213051509,213071041,213077816,213104569,213117410,213129889,213167973,213230544,213232255,213242297,213242658,213261640,213262816,213273464	Gene ID= ENSG00000136643.11 TPM= 4.25 Transcript Type= NA
chr1	213988517	214036423	213988517	214036423	+	ENST00000435016.2@PROX1	ENST00000435016.2	protein_coding	213988517,213996469,214005165,214011521,214035649	213988721,213998260,214005272,214011715,214036423	Gene ID= ENSG00000117707.15 TPM= 7.44 Transcript Type= protein_coding
chr1	214038053	214040995	214038053	214040995	+	transcript10228.chr1.nnic@NA	transcript10228.chr1.nnic	NA	214038053	214040995	Gene ID= novel_gene_chr1_10229 TPM= 7.44 Transcript Type= NA
chr1	214281102	214337131	214281102	214337131	+	ENST00000491455.5@SMYD2	ENST00000491455.5	protein_coding	214281102,214305187,214314762,214318079,214318859,214324641,214327622,214330168,214330950,214332018,214336704	214281427,214305250,214314872,214318139,214318983,214324708,214327724,214330278,214331070,214334308,214337131	Gene ID= ENSG00000143499.13 TPM= 6.44 Transcript Type= processed_transcript
chr1	214281222	214337131	214281222	214337131	+	ENST00000460580.5@SMYD2	ENST00000460580.5	protein_coding	214281222,214314762,214318079,214318859,214324641,214327622,214330168,214330950,214332018,214334200,214336704	214281427,214314872,214318139,214318983,214324708,214327724,214330278,214331070,214332192,214334308,214337131	Gene ID= ENSG00000143499.13 TPM= 102.5 Transcript Type= processed_transcript
chr1	214281233	214337131	214281233	214337131	+	ENST00000366957.9@SMYD2	ENST00000366957.9	protein_coding	214281233,214305187,214314762,214318079,214318859,214324641,214327622,214330168,214330950,214332018,214334200,214336704	214281427,214305250,214314872,214318139,214318983,214324708,214327724,214330278,214331070,214332192,214334308,214337131	Gene ID= ENSG00000143499.13 TPM= 547.01 Transcript Type= protein_coding
chr1	214288940	214292745	214288940	214292745	-	transcript10259.chr1.nnic@NA	transcript10259.chr1.nnic	NA	214288940	214292745	Gene ID= novel_gene_chr1_10260 TPM= 6.37 Transcript Type= NA
chr1	214528276	214551602	214528276	214551602	-	ENST00000491277.1@PTPN14	ENST00000491277.1	protein_coding	214551183,214528276	214551602,214533407	Gene ID= ENSG00000152104.11 TPM= 4.25 Transcript Type= processed_transcript
chr1	214359382	214363005	214359382	214363005	-	transcript10270.chr1.nnic@NA	transcript10270.chr1.nnic	NA	214359382	214363005	Gene ID= novel_gene_chr1_10271 TPM= 2.12 Transcript Type= NA
chr1	215567382	215608533	215567382	215608533	+	transcript10281.chr1.nic@KCTD3	transcript10281.chr1.nic	protein_coding	215567382,215573786,215574073,215575901,215577670,215578001,215579000,215579909,215586495,215595356,215601867,215602085,215604132,215608017	215567768,215573839,215574118,215575974,215577728,215578081,215579137,215579999,215586685,215595471,215601954,215602201,215604302,215608533	Gene ID= ENSG00000136636.12 TPM= 2.12 Transcript Type= NA
chr1	215567392	215621807	215567392	215621807	+	ENST00000259154.8@KCTD3	ENST00000259154.8	protein_coding	215567392,215573786,215574073,215575901,215577670,215578001,215579000,215579909,215586495,215595356,215601867,215602085,215604132,215608017,215611825,215618886,215619153,215620057	215567768,215573839,215574118,215575974,215577728,215578081,215579137,215579999,215586685,215595471,215601954,215602201,215604302,215608172,215611921,215619070,215619291,215621807	Gene ID= ENSG00000136636.12 TPM= 9.56 Transcript Type= protein_coding
chr1	215714831	215719381	215714831	215719381	+	transcript10283.chr1.nnic@NA	transcript10283.chr1.nnic	NA	215714831	215719381	Gene ID= novel_gene_chr1_10284 TPM= 2.12 Transcript Type= NA
chr1	216503246	216723472	216503246	216723472	-	ENST00000391890.7@ESRRG	ENST00000391890.7	protein_coding	216723240,216715074,216714516,216677076,216650973,216567988,216564219,216519152,216503246	216723472,216715249,216714634,216677491,216651089,216568098,216564380,216519421,216507183	Gene ID= ENSG00000196482.16 TPM= 4.96 Transcript Type= protein_coding
chr1	216503254	217137754	216503254	217137754	-	ENST00000493603.5@ESRRG	ENST00000493603.5	protein_coding	217137667,216939582,216865061,216677076,216650973,216567988,216564219,216519152,216503254	217137754,216939673,216865178,216677491,216651089,216568098,216564380,216519421,216507183	Gene ID= ENSG00000196482.16 TPM= 3.9 Transcript Type= protein_coding
chr1	216503254	216723453	216503254	216723453	-	ENST00000408911.7@ESRRG	ENST00000408911.7	protein_coding	216723244,216677076,216650973,216567988,216564219,216519152,216503254	216723453,216677491,216651089,216568098,216564380,216519421,216507183	Gene ID= ENSG00000196482.16 TPM= 2.84 Transcript Type= protein_coding
chr1	217426992	217631082	217426992	217631082	-	ENST00000366935.7@GPATCH2	ENST00000366935.7	protein_coding	217630916,217619783,217614141,217610889,217610321,217514822,217498356,217491680,217449249,217426992	217631082,217620499,217614202,217611071,217610400,217514889,217498395,217491750,217449337,217431365	Gene ID= ENSG00000092978.10 TPM= 12.75 Transcript Type= protein_coding
chr1	218285287	218337983	218285287	218337983	+	ENST00000366932.3@RRP15	ENST00000366932.3	protein_coding	218285287,218302294,218305028,218307431,218330948	218285455,218302559,218305125,218307632,218337983	Gene ID= ENSG00000067533.5 TPM= 11.68 Transcript Type= protein_coding
chr1	218304831	218331575	218304831	218331575	+	transcript10304.chr1.nic@RRP15	transcript10304.chr1.nic	protein_coding	218304831,218307431,218330948	218305125,218307632,218331575	Gene ID= ENSG00000067533.5 TPM= 4.25 Transcript Type= NA
chr1	218442626	218443996	218442626	218443996	+	ENST00000625474.1@TGFB2-OT1	ENST00000625474.1	3prime_overlapping_ncRNA	218442626	218443996	Gene ID= ENSG00000281453.1 TPM= 2.12 Transcript Type= 3prime_overlapping_ncRNA
chr1	219123957	219173797	219123957	219173797	-	transcript10321.chr1.nnic@LYPLAL1-AS1	transcript10321.chr1.nnic	antisense_RNA	219173470,219156120,219149939,219123957	219173797,219156199,219150031,219125111	Gene ID= ENSG00000228063.1 TPM= 2.12 Transcript Type= NA
chr1	219173875	219212865	219173875	219212865	+	ENST00000366927.3@LYPLAL1	ENST00000366927.3	protein_coding	219173875,219179147,219193130,219210532,219211492	219173981,219179246,219193251,219210647,219212865	Gene ID= ENSG00000143353.11 TPM= 4.67 Transcript Type= protein_coding
chr1	219173844	219212865	219173844	219212865	+	ENST00000366928.9@LYPLAL1	ENST00000366928.9	protein_coding	219173844,219179147,219193082,219210532,219211492	219173981,219179246,219193251,219210647,219212865	Gene ID= ENSG00000143353.11 TPM= 34.41 Transcript Type= protein_coding
chr1	219173869	219212865	219173869	219212865	+	ENST00000460522.5@LYPLAL1	ENST00000460522.5	protein_coding	219173869,219179147,219210532,219211492	219173981,219179246,219210647,219212865	Gene ID= ENSG00000143353.11 TPM= 1.49 Transcript Type= processed_transcript
chr1	219173896	219212865	219173896	219212865	+	ENST00000483635.5@LYPLAL1	ENST00000483635.5	protein_coding	219173896,219179147,219193082,219210532,219211492	219174304,219179246,219193251,219210647,219212865	Gene ID= ENSG00000143353.11 TPM= 8.92 Transcript Type= processed_transcript
chr1	219174194	219212865	219174194	219212865	+	ENST00000469590.5@LYPLAL1	ENST00000469590.5	protein_coding	219174194,219179147,219210532,219211492	219174304,219179246,219210647,219212865	Gene ID= ENSG00000143353.11 TPM= 1.49 Transcript Type= processed_transcript
chr1	219987296	220046451	219987296	220046451	-	ENST00000609181.5@EPRS	ENST00000609181.5	protein_coding	220046343,220040185,220034914,220033502,220032387,220030386,220025132,220024264,220022347,220019988,220018995,220018449,220018126,220010946,220007202,220006106,220005248,220001138,219996983,219988590,219987296	220046451,220040269,220035013,220033658,220032526,220030480,220025258,220024456,220022518,220020221,220019079,220018508,220018146,220011056,220007338,220006313,220005360,220001255,219997342,219988823,219987404	Gene ID= ENSG00000136628.17 TPM= 39.3 Transcript Type= protein_coding
chr1	220094102	220148041	220094102	220148041	+	ENST00000366922.2@IARS2	ENST00000366922.2	protein_coding	220094102,220096104,220100490,220102129,220102363,220102495,220102687,220103447,220105891,220107061,220110786,220114314,220125237,220126750,220134402,220136809,220137918,220139008,220140183,220141803,220142944,220145509,220147493	220094483,220096226,220100649,220102277,220102412,220102604,220102777,220103562,220106060,220107151,220110937,220114474,220125339,220126843,220134510,220136911,220138043,220139139,220140289,220141948,220143134,220145653,220148041	Gene ID= ENSG00000067704.9 TPM= 158.26 Transcript Type= protein_coding
chr1	220528140	220636758	220528140	220636758	+	transcript10378.chr1.nic@MARK1	transcript10378.chr1.nic	protein_coding	220528140,220579354,220581065,220598331,220599798,220604067,220615939,220618310,220618636,220631035,220632201,220635376,220635833	220528873,220579557,220581118,220598379,220599863,220604137,220615995,220618546,220618755,220631134,220632313,220635529,220636758	Gene ID= ENSG00000116141.15 TPM= 2.66 Transcript Type= NA
chr1	220528140	220582897	220528140	220582897	+	transcript10382.chr1.nic@MARK1	transcript10382.chr1.nic	protein_coding	220528140,220579354,220581065	220528873,220579557,220582897	Gene ID= ENSG00000116141.15 TPM= 3.19 Transcript Type= NA
chr1	220528557	220662458	220528557	220662458	+	ENST00000366917.5@MARK1	ENST00000366917.5	protein_coding	220528557,220579354,220581065,220598331,220599798,220604067,220615939,220618310,220618636,220631035,220632201,220635376,220635833,220650620,220651986,220653101,220657790,220661812	220528873,220579557,220581118,220598379,220599863,220604137,220615995,220618546,220618755,220631134,220632313,220635529,220636026,220650720,220652150,220653352,220657834,220662458	Gene ID= ENSG00000116141.15 TPM= 9.03 Transcript Type= protein_coding
chr1	220689845	220699157	220689845	220699157	+	ENST00000294889.5@C1orf115	ENST00000294889.5	protein_coding	220689845,220696612	220690711,220699157	Gene ID= ENSG00000162817.6 TPM= 28.68 Transcript Type= protein_coding
chr1	220755052	220784257	220755052	220784257	+	transcript10390.chr1.nic@MARC2	transcript10390.chr1.nic	protein_coding	220755052,220761658,220762910,220780018,220781778,220783919	220756422,220761820,220763050,220780239,220781932,220784257	Gene ID= ENSG00000117791.15 TPM= 2.12 Transcript Type= NA
chr1	220748269	220784240	220748269	220784240	+	ENST00000359316.6@MARC2	ENST00000359316.6	protein_coding	220748269,220754947,220761658,220762910,220783919	220748803,220755120,220761820,220763050,220784240	Gene ID= ENSG00000117791.15 TPM= 2.12 Transcript Type= protein_coding
chr1	220748334	220784815	220748334	220784815	+	ENST00000366913.7@MARC2	ENST00000366913.7	protein_coding	220748334,220754947,220761658,220762910,220780018,220780168,220781778,220783919	220748803,220755120,220761820,220763050,220780079,220780239,220781932,220784815	Gene ID= ENSG00000117791.15 TPM= 5.31 Transcript Type= protein_coding
chr1	220786759	220819657	220786759	220819657	+	ENST00000366910.9@MARC1	ENST00000366910.9	protein_coding	220786759,220791491,220796643,220797874,220805052,220805203,220813292	220787219,220791664,220796805,220798014,220805113,220805274,220819657	Gene ID= ENSG00000186205.12 TPM= 7.44 Transcript Type= protein_coding
chr1	220797763	220814388	220797763	220814388	+	transcript10396.chr1.nic@MARC1	transcript10396.chr1.nic	protein_coding	220797763,220805052,220805203,220813292	220798065,220805113,220805274,220814388	Gene ID= ENSG00000186205.12 TPM= 2.12 Transcript Type= NA
chr1	220879400	220885059	220879400	220885059	+	ENST00000366903.7@HLX	ENST00000366903.7	protein_coding	220879400,220881194,220882164,220884195	220880449,220881373,220882348,220885059	Gene ID= ENSG00000136630.12 TPM= 22.31 Transcript Type= protein_coding
chr1	222644319	222666143	222644319	222666143	+	transcript10409.chr1.nnic@MIA3	transcript10409.chr1.nnic	protein_coding	222644319,222645554,222648829,222650292,222650634,222650793,222651977,222652228,222653008,222653228,222654243,222654389,222654655,222658722,222659453,222659622,222659734,222659906,222660177,222662056,222662253,222662458,222663998,222665309	222644586,222645685,222648850,222650380,222650711,222650903,222652048,222652332,222653130,222653339,222654298,222654479,222654793,222658823,222659513,222659657,222659801,222660006,222660314,222662124,222662332,222662529,222664148,222666143	Gene ID= ENSG00000154305.16 TPM= 6.37 Transcript Type= NA
chr1	222644303	222665823	222644303	222665823	+	ENST00000340535.11@MIA3	ENST00000340535.11	protein_coding	222644303,222645554,222648829,222650292,222650634,222650793,222651977,222652228,222653008,222653228,222654243,222654389,222654655,222658722,222659453,222659622,222659734,222659906,222660177,222662056,222662253,222663998,222665309	222644586,222645685,222648850,222650380,222650711,222650903,222652048,222652332,222653130,222653339,222654298,222654479,222654793,222658823,222659513,222659657,222659801,222660006,222660314,222662124,222662332,222664148,222665823	Gene ID= ENSG00000154305.16 TPM= 1.06 Transcript Type= protein_coding
chr1	222621815	222625153	222621815	222625153	-	transcript10427.chr1.nnic@NA	transcript10427.chr1.nnic	NA	222621815	222625153	Gene ID= novel_gene_chr1_10428 TPM= 2.12 Transcript Type= NA
chr1	222668013	222712524	222668013	222712524	-	ENST00000340020.10@AIDA	ENST00000340020.10	protein_coding	222712208,222703148,222694210,222693789,222687595,222686930,222676096,222673313,222670133,222668013	222712524,222703217,222694263,222693843,222687658,222687036,222676218,222673435,222670250,222669989	Gene ID= ENSG00000186063.12 TPM= 15.93 Transcript Type= protein_coding
chr1	222712553	222735196	222712553	222735196	+	ENST00000340934.9@BROX	ENST00000340934.9	protein_coding	222712553,222715684,222718925,222719263,222722419,222724092,222725450,222727168,222728743,222729620,222730027,222731357,222732628	222712942,222715800,222719031,222719359,222722514,222724164,222725555,222727257,222728828,222729701,222730177,222731516,222735196	Gene ID= ENSG00000162819.11 TPM= 32.93 Transcript Type= protein_coding
chr1	222713374	222735196	222713374	222735196	+	transcript10417.chr1.nic@BROX	transcript10417.chr1.nic	protein_coding	222713374,222715684,222718925,222719263,222722419,222724092,222725450,222727168,222728743,222729620,222730027,222731357,222732628	222713416,222715800,222719031,222719359,222722514,222724164,222725555,222727257,222728828,222729701,222730177,222731516,222735196	Gene ID= ENSG00000162819.11 TPM= 32.93 Transcript Type= NA
chr1	222712559	222713985	222712559	222713985	+	ENST00000496267.1@BROX	ENST00000496267.1	protein_coding	222712559,222713588	222712942,222713985	Gene ID= ENSG00000162819.11 TPM= 2.12 Transcript Type= processed_transcript
chr1	222713329	222713894	222713329	222713894	+	transcript10426.chr1.nnic@BROX	transcript10426.chr1.nnic	protein_coding	222713329,222713588	222713416,222713894	Gene ID= ENSG00000162819.11 TPM= 3.19 Transcript Type= NA
chr1	223220821	223364202	223220821	223364202	-	ENST00000366878.8@SUSD4	ENST00000366878.8	protein_coding	223364057,223363278,223292439,223268502,223264630,223229197,223227594,223223249,223220821	223364202,223363460,223292651,223268675,223264818,223229388,223227738,223223631,223222220	Gene ID= ENSG00000143502.14 TPM= 4.78 Transcript Type= protein_coding
chr1	223234915	223364167	223234915	223364167	-	ENST00000344029.6@SUSD4	ENST00000344029.6	protein_coding	223364057,223363278,223292439,223268502,223264630,223234915	223364167,223363460,223292651,223268675,223264818,223235100	Gene ID= ENSG00000143502.14 TPM= 4.78 Transcript Type= protein_coding
chr1	223712332	223776018	223712332	223776018	+	ENST00000295006.5@CAPN2	ENST00000295006.5	protein_coding	223712332,223717762,223744100,223745306,223746997,223749039,223750890,223751997,223752796,223755480,223757369,223759270,223761581,223762186,223764150,223766367,223769841,223770447,223771809,223772181,223774834	223712877,223717831,223744218,223745439,223747165,223749122,223750975,223752071,223752956,223755649,223757380,223759481,223761617,223762251,223764207,223766431,223769909,223770525,223771925,223772239,223776018	Gene ID= ENSG00000162909.17 TPM= 204.82 Transcript Type= protein_coding
chr1	223779899	223845972	223779899	223845972	-	ENST00000343537.11@TP53BP2	ENST00000343537.11	protein_coding	223845654,223821220,223814240,223810431,223806846,223804174,223803271,223802731,223802116,223800700,223799899,223798215,223795815,223793303,223792389,223789008,223784115,223779899	223845972,223821367,223814353,223810513,223806947,223804348,223803452,223802895,223802344,223800810,223800047,223798677,223796590,223793440,223792522,223789174,223784314,223780894	Gene ID= ENSG00000143514.16 TPM= 4.25 Transcript Type= protein_coding
chr1	223846083	223846709	223846083	223846709	+	transcript10462.chr1.nnic@NA	transcript10462.chr1.nnic	NA	223846083	223846709	Gene ID= novel_gene_chr1_10463 TPM= 2.12 Transcript Type= NA
chr1	223992709	224010116	223992709	224010116	+	transcript10478.chr1.nic@AC138393.1	transcript10478.chr1.nic	transcribed_unprocessed_pseudogene	223992709,224003520,224007294,224009320	223993047,224003654,224007417,224010116	Gene ID= ENSG00000185495.10 TPM= 2.12 Transcript Type= NA
chr1	223992709	224010608	223992709	224010608	+	transcript10480.chr1.nic@AC138393.1	transcript10480.chr1.nic	transcribed_unprocessed_pseudogene	223992709,224003520,224009320	223993047,224003654,224010608	Gene ID= ENSG00000185495.10 TPM= 14.87 Transcript Type= NA
chr1	224114087	224162047	224114087	224162047	+	ENST00000366862.9@FBXO28	ENST00000366862.9	protein_coding	224114087,224130472,224134074,224153142,224157352	224114396,224130581,224134212,224153337,224162047	Gene ID= ENSG00000143756.11 TPM= 11.68 Transcript Type= protein_coding
chr1	224183171	224193441	224183171	224193441	+	ENST00000323699.8@DEGS1	ENST00000323699.8	protein_coding	224183171,224189577,224192332	224183418,224190319,224193441	Gene ID= ENSG00000143753.12 TPM= 19.12 Transcript Type= protein_coding
chr1	224227337	224330189	224227337	224330189	-	ENST00000482491.5@NVL	ENST00000482491.5	protein_coding	224330071,224326391,224317878,224317694,224311800,224307991,224305034,224304736,224303723,224301691,224300562,224296501,224294267,224289484,224287775,224286026,224281123,224275339,224268034,224250212,224236506,224233201,224231226,224227337	224330189,224326464,224317930,224317793,224311857,224308263,224305166,224304812,224303857,224301771,224300663,224296618,224294411,224289733,224287993,224286130,224281185,224275458,224268133,224250318,224236582,224233289,224231296,224227670	Gene ID= ENSG00000143748.17 TPM= 1.41 Transcript Type= protein_coding
chr1	224227337	224330181	224227337	224330181	-	transcript10499.chr1.nic@NVL	transcript10499.chr1.nic	protein_coding	224330071,224317878,224317694,224311800,224307991,224305034,224304736,224303723,224301691,224300562,224296501,224294267,224289484,224287775,224286026,224281123,224275339,224268034,224250212,224236506,224233201,224231226,224227337	224330181,224317930,224317793,224311857,224308263,224305166,224304812,224303857,224301771,224300663,224296618,224294411,224289733,224287993,224286130,224281185,224275458,224268133,224250318,224236582,224233289,224231296,224227670	Gene ID= ENSG00000143748.17 TPM= 4.6 Transcript Type= NA
chr1	224227334	224330387	224227334	224330387	-	ENST00000281701.10@NVL	ENST00000281701.10	protein_coding	224330071,224326391,224317878,224317694,224311800,224307991,224305034,224304736,224303723,224300562,224296501,224294267,224289484,224287775,224286026,224281123,224275339,224268034,224250212,224236506,224233201,224231226,224227334	224330387,224326464,224317930,224317793,224311857,224308263,224305166,224304812,224303857,224300663,224296618,224294411,224289733,224287993,224286130,224281185,224275458,224268133,224250318,224236582,224233289,224231296,224227670	Gene ID= ENSG00000143748.17 TPM= 2.12 Transcript Type= protein_coding
chr1	224227337	224330181	224227337	224330181	-	transcript10504.chr1.nic@NVL	transcript10504.chr1.nic	protein_coding	224330071,224317878,224317694,224307991,224305034,224304736,224303723,224300562,224296501,224294267,224289484,224287775,224286026,224281123,224275339,224268034,224250212,224236506,224233201,224231226,224227337	224330181,224317930,224317793,224308263,224305166,224304812,224303857,224300663,224296618,224294411,224289733,224287993,224286130,224281185,224275458,224268133,224250318,224236582,224233289,224231296,224227670	Gene ID= ENSG00000143748.17 TPM= 2.47 Transcript Type= NA
chr1	224227334	224330170	224227334	224330170	-	ENST00000391875.6@NVL	ENST00000391875.6	protein_coding	224330071,224317878,224317694,224311800,224307991,224305034,224304736,224303723,224300562,224296501,224294267,224289484,224287775,224286026,224281123,224275339,224268034,224250212,224236506,224233201,224231226,224227334	224330170,224317930,224317793,224311857,224308263,224305166,224304812,224303857,224300663,224296618,224294411,224289733,224287993,224286130,224281185,224275458,224268133,224250318,224236582,224233289,224231296,224227670	Gene ID= ENSG00000143748.17 TPM= 3.19 Transcript Type= protein_coding
chr1	224356850	224379452	224356850	224379452	+	ENST00000465271.5@CNIH4	ENST00000465271.5	protein_coding	224356850,224360495,224365879,224371283,224375795	224356993,224360563,224365991,224371423,224379452	Gene ID= ENSG00000143771.11 TPM= 9.56 Transcript Type= protein_coding
chr1	224356893	224379452	224356893	224379452	+	ENST00000366856.3@CNIH4	ENST00000366856.3	protein_coding	224356893,224360495,224365879,224371283,224379069	224356993,224360563,224365991,224371423,224379452	Gene ID= ENSG00000143771.11 TPM= 3.19 Transcript Type= protein_coding
chr1	224389136	224434288	224389136	224434288	-	transcript10519.chr1.nic@WDR26	transcript10519.chr1.nic	protein_coding	224433684,224431682,224431525,224424518,224419518,224418260,224411427,224404430,224400950,224398889,224398515,224398097,224393828,224389136	224434288,224431781,224431581,224424654,224419615,224418416,224411565,224404570,224401069,224399034,224398593,224398226,224394013,224389860	Gene ID= ENSG00000162923.14 TPM= 8.5 Transcript Type= NA
chr1	224385143	224434299	224385143	224434299	-	ENST00000414423.6@WDR26	ENST00000414423.6	protein_coding	224433684,224431682,224431477,224424518,224419518,224418260,224411427,224404430,224400950,224398889,224398515,224398097,224393828,224385143	224434299,224431781,224431581,224424654,224419615,224418416,224411565,224404570,224401069,224399034,224398593,224398226,224394013,224389860	Gene ID= ENSG00000162923.14 TPM= 12.75 Transcript Type= protein_coding
chr1	225401502	225428035	225401502	225428035	-	ENST00000272163.8@LBR	ENST00000272163.8	protein_coding	225427954,225423911,225422077,225419715,225419263,225417984,225415278,225412454,225411337,225410291,225406664,225404626,225404404,225401502	225428035,225424089,225422277,225419798,225419452,225418180,225415332,225412645,225411440,225410416,225406832,225404706,225404526,225403463	Gene ID= ENSG00000143815.14 TPM= 13.81 Transcript Type= protein_coding
chr1	225495480	225653101	225495480	225653101	-	transcript10527.chr1.nnic@ENAH	transcript10527.chr1.nnic	protein_coding	225652686,225600208,225567249,225554906,225530554,225519198,225517196,225514596,225512871,225512657,225511811,225507951,225504991,225500992,225498347,225495480	225653101,225600362,225567414,225555083,225530638,225519565,225517306,225514900,225513016,225512714,225511859,225508017,225505053,225501070,225498404,225497812	Gene ID= ENSG00000154380.17 TPM= 3.19 Transcript Type= NA
chr1	225495480	225524695	225495480	225524695	-	transcript10532.chr1.nnic@ENAH	transcript10532.chr1.nnic	protein_coding	225524599,225519198,225517196,225514596,225512871,225512657,225511811,225507951,225504991,225500992,225498347,225495480	225524695,225519565,225517306,225514900,225513016,225512714,225511859,225508017,225505053,225501070,225498404,225497812	Gene ID= ENSG00000154380.17 TPM= 3.19 Transcript Type= NA
chr1	225492825	225495601	225492825	225495601	-	transcript10543.chr1.nnic@NA	transcript10543.chr1.nnic	NA	225492825	225495601	Gene ID= novel_gene_chr1_10544 TPM= 6.37 Transcript Type= NA
chr1	225653296	225654311	225653296	225654311	+	transcript10539.chr1.nnic@NA	transcript10539.chr1.nnic	NA	225653296	225654311	Gene ID= novel_gene_chr1_10540 TPM= 4.25 Transcript Type= NA
chr1	225777829	225790466	225777829	225790466	+	ENST00000304786.11@SRP9	ENST00000304786.11	protein_coding	225777829,225783300,225789240	225778012,225783368,225790466	Gene ID= ENSG00000143742.12 TPM= 280.76 Transcript Type= protein_coding
chr1	225777837	225790466	225777837	225790466	+	ENST00000366839.8@SRP9	ENST00000366839.8	protein_coding	225777837,225783300,225786862,225789240	225778012,225783368,225786985,225790466	Gene ID= ENSG00000143742.12 TPM= 33.28 Transcript Type= protein_coding
chr1	225784791	225786049	225784791	225786049	-	transcript10564.chr1.nnic@NA	transcript10564.chr1.nnic	NA	225784791	225786049	Gene ID= novel_gene_chr1_10565 TPM= 2.12 Transcript Type= NA
chr1	225810095	225845559	225810095	225845559	+	ENST00000272167.9@EPHX1	ENST00000272167.9	protein_coding	225810095,225828725,225831779,225838654,225839217,225839829,225842366,225844498,225845146	225810169,225828912,225831959,225838881,225839346,225840037,225842474,225844623,225845559	Gene ID= ENSG00000143819.12 TPM= 21.24 Transcript Type= protein_coding
chr1	225845536	225882369	225845536	225882369	-	ENST00000366835.7@TMEM63A	ENST00000366835.7	protein_coding	225882304,225879220,225877395,225874288,225871987,225871076,225867888,225867112,225866574,225865897,225862771,225862455,225862218,225860860,225859196,225856911,225856652,225855878,225853629,225852664,225849912,225848897,225848492,225847034,225845536	225882369,225879410,225877594,225874367,225872053,225871113,225868030,225867163,225866682,225865967,225862851,225862578,225862351,225860997,225859349,225857017,225856738,225855940,225853791,225852769,225850079,225849012,225848554,225847213,225846932	Gene ID= ENSG00000196187.11 TPM= 2.12 Transcript Type= protein_coding
chr1	225845536	225867136	225845536	225867136	-	transcript10550.chr1.nnic@TMEM63A	transcript10550.chr1.nnic	protein_coding	225865897,225862771,225862455,225862218,225860860,225859196,225856911,225856652,225855878,225853629,225852664,225849912,225848897,225848492,225847034,225845536	225867136,225862851,225862580,225862351,225860997,225859349,225857017,225856738,225855940,225853791,225852769,225850079,225849012,225848554,225847213,225846932	Gene ID= ENSG00000196187.11 TPM= 3.19 Transcript Type= NA
chr1	225919878	225924332	225919878	225924332	-	transcript10571.chr1.nic@PYCR2	transcript10571.chr1.nic	protein_coding	225924044,225922204,225921858,225921552,225921208,225919878	225924332,225923771,225922079,225921644,225921371,225920620	Gene ID= ENSG00000143811.18 TPM= 6.46 Transcript Type= NA
chr1	225919878	225924332	225919878	225924332	-	transcript10572.chr1.nnic@PYCR2	transcript10572.chr1.nnic	protein_coding	225924044,225923701,225922204,225921858,225921208,225919878	225924332,225923771,225922383,225922079,225921371,225920620	Gene ID= ENSG00000143811.18 TPM= 12.48 Transcript Type= NA
chr1	225919878	225924259	225919878	225924259	-	ENST00000343818.10@PYCR2	ENST00000343818.10	protein_coding	225924044,225923701,225922204,225921858,225921552,225921208,225919878	225924259,225923771,225922383,225922079,225921644,225921371,225920620	Gene ID= ENSG00000143811.18 TPM= 99.93 Transcript Type= protein_coding
chr1	225936604	225941489	225936604	225941489	-	ENST00000366820.9@LEFTY2	ENST00000366820.9	protein_coding	225940891,225939756,225939361,225936604	225941489,225940002,225939600,225937804	Gene ID= ENSG00000143768.12 TPM= 3.19 Transcript Type= protein_coding
chr1	225982702	225999331	225982702	225999331	-	ENST00000272091.7@SDE2	ENST00000272091.7	protein_coding	225999193,225995266,225992891,225992398,225991243,225987896,225982702	225999331,225995383,225993002,225992567,225991363,225988388,225985523	Gene ID= ENSG00000143751.9 TPM= 15.93 Transcript Type= protein_coding
chr1	226062678	226071999	226062678	226071999	+	ENST00000366815.7@H3F3A	ENST00000366815.7	protein_coding	226062678,226064329,226065656,226071351	226062811,226064479,226065809,226071999	Gene ID= ENSG00000163041.9 TPM= 303.78 Transcript Type= protein_coding
chr1	226154226	226186692	226154226	226186692	-	transcript10585.chr1.nic@ACBD3	transcript10585.chr1.nic	protein_coding	226186390,226165859,226164789,226161531,226159184,226154226	226186692,226166000,226164929,226161689,226159358,226154833	Gene ID= ENSG00000182827.8 TPM= 2.12 Transcript Type= NA
chr1	226144679	226186730	226144679	226186730	-	ENST00000366812.5@ACBD3	ENST00000366812.5	protein_coding	226186390,226165859,226164789,226161531,226159184,226154647,226152335,226144679	226186730,226166000,226164929,226161689,226159358,226154833,226152619,226146821	Gene ID= ENSG00000182827.8 TPM= 40.36 Transcript Type= protein_coding
chr1	226231157	226309869	226231157	226309869	-	ENST00000366808.5@LIN9	ENST00000366808.5	protein_coding	226309626,226301173,226297719,226295842,226287664,226286333,226277775,226267957,226266213,226265533,226250839,226238971,226233344,226233096,226231157	226309869,226301205,226297813,226295946,226287797,226286458,226277932,226268090,226266332,226265634,226250919,226239096,226233523,226233193,226232606	Gene ID= ENSG00000183814.15 TPM= 1.41 Transcript Type= protein_coding
chr1	226231157	226309733	226231157	226309733	-	ENST00000328205.9@LIN9	ENST00000328205.9	protein_coding	226309109,226301173,226297719,226295842,226287664,226286333,226277775,226267957,226266213,226265533,226250839,226238971,226233344,226233096,226231157	226309733,226301205,226297813,226295946,226287797,226286458,226277932,226268090,226266332,226265634,226250919,226239096,226233523,226233193,226232606	Gene ID= ENSG00000183814.15 TPM= 21.59 Transcript Type= protein_coding
chr1	226231149	226309172	226231149	226309172	-	ENST00000460719.5@LIN9	ENST00000460719.5	protein_coding	226309109,226301173,226297719,226287664,226286333,226277775,226267957,226266213,226265533,226250839,226238971,226233344,226233096,226231149	226309172,226301205,226297813,226287797,226286458,226277932,226268090,226266332,226265634,226250919,226239096,226233523,226233193,226232606	Gene ID= ENSG00000183814.15 TPM= 1.41 Transcript Type= protein_coding
chr1	226305627	226306331	226305627	226306331	+	transcript10601.chr1.nnic@NA	transcript10601.chr1.nnic	NA	226305627	226306331	Gene ID= novel_gene_chr1_10602 TPM= 2.12 Transcript Type= NA
chr1	226308556	226310108	226308556	226310108	+	transcript10603.chr1.nnic@NA	transcript10603.chr1.nnic	NA	226308556	226310108	Gene ID= novel_gene_chr1_10604 TPM= 6.37 Transcript Type= NA
chr1	226388698	226408125	226388698	226408125	-	transcript10609.chr1.nic@PARP1	transcript10609.chr1.nic	protein_coding	226407810,226402214,226392199,226390410,226388698	226408125,226402379,226392314,226390624,226388755	Gene ID= ENSG00000143799.12 TPM= 20.18 Transcript Type= NA
chr1	226360691	226408073	226360691	226408073	-	ENST00000366794.9@PARP1	ENST00000366794.9	protein_coding	226407810,226402214,226392199,226390410,226388656,226386326,226385504,226383036,226381068,226379922,226379573,226379142,226377108,226374226,226370434,226368199,226367480,226365954,226365002,226363943,226363099,226361969,226360691	226408073,226402379,226392314,226390624,226388755,226386442,226385680,226383183,226381208,226380164,226379641,226379274,226377303,226374354,226370517,226368321,226367608,226366052,226365154,226364070,226363160,226362083,226361541	Gene ID= ENSG00000143799.12 TPM= 83.91 Transcript Type= protein_coding
chr1	226707190	226739323	226707190	226739323	-	ENST00000366784.1@ITPKB	ENST00000366784.1	protein_coding	226739041,226735527,226707190	226739323,226737663,226707915	Gene ID= ENSG00000143772.9 TPM= 1.06 Transcript Type= protein_coding
chr1	226665562	226669158	226665562	226669158	+	transcript10614.chr1.nnic@NA	transcript10614.chr1.nnic	NA	226665562	226669158	Gene ID= novel_gene_chr1_10615 TPM= 2.12 Transcript Type= NA
chr1	226870310	226896098	226870310	226896098	+	transcript10617.chr1.nic@PSEN2	transcript10617.chr1.nic	protein_coding	226870310,226871262,226875365,226881888,226883705,226885538,226888091,226888829,226890035,226891278,226891743,226894007,226895424	226870505,226871404,226875550,226882048,226883919,226885679,226888158,226889049,226890133,226891361,226891844,226894125,226896098	Gene ID= ENSG00000143801.16 TPM= 6.19 Transcript Type= NA
chr1	226870648	226896098	226870648	226896098	+	transcript10623.chr1.nic@PSEN2	transcript10623.chr1.nic	protein_coding	226870648,226875365,226881888,226883705,226885538,226888091,226888829,226890035,226891278,226891743,226894007,226895424	226871404,226875550,226882048,226883919,226885679,226888158,226889049,226890133,226891361,226891844,226894125,226896098	Gene ID= ENSG00000143801.16 TPM= 18.94 Transcript Type= NA
chr1	226870648	226896098	226870648	226896098	+	transcript10624.chr1.nic@PSEN2	transcript10624.chr1.nic	protein_coding	226870648,226875365,226888091,226888829,226890035,226891278,226891743,226894007,226895424	226871404,226875550,226888158,226889049,226890133,226891361,226891844,226894125,226896098	Gene ID= ENSG00000143801.16 TPM= 3.54 Transcript Type= NA
chr1	226870620	226895803	226870620	226895803	+	ENST00000422240.6@PSEN2	ENST00000422240.6	protein_coding	226870620,226871262,226875365,226881888,226883705,226885538,226888091,226888829,226890035,226891278,226891746,226894007,226895424	226870649,226871404,226875550,226882048,226883919,226885679,226888158,226889049,226890133,226891361,226891844,226894125,226895803	Gene ID= ENSG00000143801.16 TPM= 1.06 Transcript Type= protein_coding
chr1	226897536	226987545	226897536	226987545	+	ENST00000366779.5@COQ8A	ENST00000366779.5	protein_coding	226897536,226908522,226909702,226910589,226917527,226939408,226961377,226965000,226965671,226977449,226982027,226982678,226982894,226983552,226983761,226984094,226984548,226984876,226985254,226986453	226899555,226908683,226909794,226910757,226917660,226939591,226961562,226965410,226965737,226977523,226982149,226982763,226983034,226983633,226983854,226984235,226984655,226984941,226985340,226987545	Gene ID= ENSG00000163050.16 TPM= 26.58 Transcript Type= protein_coding
chr1	226943290	226987544	226943290	226987544	+	transcript10643.chr1.nnic@COQ8A	transcript10643.chr1.nnic	protein_coding	226943290,226961377,226965000,226965671,226977449,226982027,226982678,226982894,226983552,226983761,226984094,226984548,226984876,226985254,226986453	226943403,226961562,226965410,226965737,226977523,226982149,226982763,226983034,226983633,226983854,226984235,226984655,226984941,226985340,226987544	Gene ID= ENSG00000163050.16 TPM= 42.34 Transcript Type= NA
chr1	226940288	226987544	226940288	226987544	+	ENST00000366777.3@COQ8A	ENST00000366777.3	protein_coding	226940288,226961377,226965000,226965671,226977449,226982027,226982678,226982894,226983552,226983761,226984094,226984548,226984876,226985254,226986453	226940399,226961562,226965410,226965737,226977523,226982149,226982763,226983034,226983633,226983854,226984235,226984655,226984941,226985340,226987544	Gene ID= ENSG00000163050.16 TPM= 347.18 Transcript Type= protein_coding
chr1	226940305	226941615	226940305	226941615	+	transcript10653.chr1.nnic@NA	transcript10653.chr1.nnic	NA	226940305	226941615	Gene ID= novel_gene_chr1_10654 TPM= 4.25 Transcript Type= NA
chr1	227129149	227318508	227129149	227318508	-	transcript10657.chr1.nic@CDC42BPA	transcript10657.chr1.nic	protein_coding	227317005,227254064,227213136,227199557,227193786,227160543,227147359,227145489,227142945,227139576,227129149	227318508,227254155,227213219,227199652,227193934,227160636,227147559,227145737,227143024,227139742,227129231	Gene ID= ENSG00000143776.18 TPM= 30.8 Transcript Type= NA
chr1	227138326	227144602	227138326	227144602	-	transcript10662.chr1.nic@CDC42BPA	transcript10662.chr1.nic	protein_coding	227142945,227138326	227144602,227139742	Gene ID= ENSG00000143776.18 TPM= 3.19 Transcript Type= NA
chr1	227195387	227198450	227195387	227198450	+	transcript10663.chr1.nnic@NA	transcript10663.chr1.nnic	NA	227195387	227198450	Gene ID= novel_gene_chr1_10664 TPM= 2.12 Transcript Type= NA
chr1	227734201	227781226	227734201	227781226	+	transcript10681.chr1.nic@SNAP47	transcript10681.chr1.nic	protein_coding	227734201,227758995,227766959,227780527	227735499,227759485,227767083,227781226	Gene ID= ENSG00000143740.14 TPM= 17.53 Transcript Type= NA
chr1	227728539	227734352	227728539	227734352	+	ENST00000480897.5@SNAP47	ENST00000480897.5	protein_coding	227728539,227731585,227732389	227728786,227731747,227734352	Gene ID= ENSG00000143740.14 TPM= 10.62 Transcript Type= processed_transcript
chr1	227728549	227734352	227728549	227734352	+	ENST00000480265.1@SNAP47	ENST00000480265.1	protein_coding	227728549,227732389	227728786,227734352	Gene ID= ENSG00000143740.14 TPM= 4.25 Transcript Type= processed_transcript
chr1	227731234	227735411	227731234	227735411	-	ENST00000438896.2@JMJD4	ENST00000438896.2	protein_coding	227735012,227734651,227733907,227733414,227732929,227731234	227735411,227734816,227734032,227733681,227733027,227732676	Gene ID= ENSG00000081692.12 TPM= 2.66 Transcript Type= protein_coding
chr1	227731224	227735389	227731224	227735389	-	transcript10677.chr1.nic@JMJD4	transcript10677.chr1.nic	protein_coding	227734651,227733907,227733414,227732881,227731224	227735389,227734032,227733681,227733027,227732676	Gene ID= ENSG00000081692.12 TPM= 3.19 Transcript Type= NA
chr1	227731224	227735310	227731224	227735310	-	transcript10678.chr1.nic@JMJD4	transcript10678.chr1.nic	protein_coding	227735012,227734651,227733907,227732881,227731224	227735310,227734816,227734032,227733681,227732676	Gene ID= ENSG00000081692.12 TPM= 2.66 Transcript Type= NA
chr1	227732284	227735310	227732284	227735310	-	transcript10679.chr1.nnic@JMJD4	transcript10679.chr1.nnic	protein_coding	227735012,227734651,227733907,227732881,227732284	227735310,227734816,227734032,227733027,227732676	Gene ID= ENSG00000081692.12 TPM= 3.19 Transcript Type= NA
chr1	227730425	227734377	227730425	227734377	-	ENST00000485807.1@JMJD4	ENST00000485807.1	protein_coding	227732881,227730425	227734377,227732676	Gene ID= ENSG00000081692.12 TPM= 30.8 Transcript Type= retained_intron
chr1	227731224	227735283	227731224	227735283	-	ENST00000620518.4@JMJD4	ENST00000620518.4	protein_coding	227735012,227734651,227733907,227733414,227732881,227731224	227735283,227734816,227734032,227733681,227733027,227732676	Gene ID= ENSG00000081692.12 TPM= 5.84 Transcript Type= protein_coding
chr1	227946659	227947932	227946659	227947932	-	transcript10691.chr1.nnic@NA	transcript10691.chr1.nnic	NA	227946659	227947932	Gene ID= novel_gene_chr1_10692 TPM= 4.25 Transcript Type= NA
chr1	228082640	228086536	228082640	228086536	+	transcript10716.chr1.nnic@NA	transcript10716.chr1.nnic	NA	228082640	228086536	Gene ID= novel_gene_chr1_10717 TPM= 9.56 Transcript Type= NA
chr1	228082660	228099212	228082660	228099212	+	ENST00000272102.9@ARF1	ENST00000272102.9	protein_coding	228082660,228097078,228097342,228097591,228097852	228082765,228097262,228097452,228097715,228099212	Gene ID= ENSG00000143761.15 TPM= 746.43 Transcript Type= protein_coding
chr1	228082660	228099211	228082660	228099211	+	ENST00000540651.5@ARF1	ENST00000540651.5	protein_coding	228082660,228097078,228097342,228097591,228097852	228082850,228097262,228097452,228097715,228099211	Gene ID= ENSG00000143761.15 TPM= 50.19 Transcript Type= protein_coding
chr1	228083150	228099211	228083150	228099211	+	ENST00000541182.1@ARF1	ENST00000541182.1	protein_coding	228083150,228097078,228097342,228097591,228097852	228083374,228097262,228097452,228097715,228099211	Gene ID= ENSG00000143761.15 TPM= 34.25 Transcript Type= protein_coding
chr1	228100731	228103462	228100731	228103462	-	ENST00000272139.4@C1orf35	ENST00000272139.4	protein_coding	228103134,228102899,228102643,228102478,228102310,228102080,228101339,228100731	228103462,228103049,228102688,228102560,228102382,228102165,228101473,228101254	Gene ID= ENSG00000143793.12 TPM= 14.42 Transcript Type= protein_coding
chr1	228100731	228103438	228100731	228103438	-	transcript10721.chr1.nic@C1orf35	transcript10721.chr1.nic	protein_coding	228103134,228102899,228102643,228102478,228102310,228102080,228101339,228100731	228103438,228103049,228102688,228102560,228102382,228102165,228101914,228101254	Gene ID= ENSG00000143793.12 TPM= 3.8 Transcript Type= NA
chr1	228100731	228103338	228100731	228103338	-	transcript10727.chr1.nic@C1orf35	transcript10727.chr1.nic	protein_coding	228103134,228102899,228102643,228102478,228101339,228100731	228103338,228103049,228102688,228102560,228102382,228101254	Gene ID= ENSG00000143793.12 TPM= 4.86 Transcript Type= NA
chr1	228100726	228103441	228100726	228103441	-	ENST00000469781.5@C1orf35	ENST00000469781.5	protein_coding	228103134,228102899,228102643,228101339,228100726	228103441,228103049,228102688,228102560,228101254	Gene ID= ENSG00000143793.12 TPM= 1.33 Transcript Type= processed_transcript
chr1	228106680	228109302	228106680	228109302	-	transcript10729.chr1.nic@MRPL55	transcript10729.chr1.nic	protein_coding	228109149,228108955,228108437,228108235,228107668,228106680	228109302,228109021,228108474,228108318,228107869,228106918	Gene ID= ENSG00000162910.18 TPM= 3.64 Transcript Type= NA
chr1	228106679	228109306	228106679	228109306	-	ENST00000336300.9@MRPL55	ENST00000336300.9	protein_coding	228109149,228108437,228108235,228107668,228106679	228109306,228108474,228108318,228107869,228106918	Gene ID= ENSG00000162910.18 TPM= 2.58 Transcript Type= protein_coding
chr1	228106679	228109299	228106679	228109299	-	ENST00000366747.7@MRPL55	ENST00000366747.7	protein_coding	228109261,228108437,228108235,228107668,228106679	228109299,228108474,228108318,228107869,228106918	Gene ID= ENSG00000162910.18 TPM= 1.52 Transcript Type= protein_coding
chr1	228106679	228109299	228106679	228109299	-	ENST00000336520.7@MRPL55	ENST00000336520.7	protein_coding	228109149,228108955,228108235,228107668,228106679	228109299,228109021,228108318,228107869,228106918	Gene ID= ENSG00000162910.18 TPM= 6.83 Transcript Type= protein_coding
chr1	228106679	228109299	228106679	228109299	-	ENST00000366746.7@MRPL55	ENST00000366746.7	protein_coding	228109261,228108235,228107668,228106679	228109299,228108318,228107869,228106918	Gene ID= ENSG00000162910.18 TPM= 7.89 Transcript Type= protein_coding
chr1	228106679	228109299	228106679	228109299	-	ENST00000295008.8@MRPL55	ENST00000295008.8	protein_coding	228109261,228108955,228108235,228107668,228106679	228109299,228109021,228108318,228107869,228106918	Gene ID= ENSG00000162910.18 TPM= 5.77 Transcript Type= protein_coding
chr1	228106679	228109283	228106679	228109283	-	ENST00000348259.9@MRPL55	ENST00000348259.9	protein_coding	228109149,228108235,228107668,228106679	228109283,228108318,228107869,228106918	Gene ID= ENSG00000162910.18 TPM= 7.89 Transcript Type= protein_coding
chr1	228140250	228148946	228140250	228148946	+	transcript10746.chr1.nic@GUK1	transcript10746.chr1.nic	protein_coding	228140250,228141124,228141626,228145511,228146026,228146842,228147406,228147615,228148371,228148665	228140363,228141288,228141829,228145624,228146067,228146938,228147544,228147699,228148456,228148946	Gene ID= ENSG00000143774.16 TPM= 58.46 Transcript Type= NA
chr1	228140290	228148946	228140290	228148946	+	ENST00000312726.8@GUK1	ENST00000312726.8	protein_coding	228140290,228141124,228145511,228146026,228146842,228147406,228147615,228148371,228148665	228140363,228141288,228145624,228146067,228146938,228147544,228147699,228148456,228148946	Gene ID= ENSG00000143774.16 TPM= 190.54 Transcript Type= protein_coding
chr1	228140290	228148955	228140290	228148955	+	ENST00000366728.6@GUK1	ENST00000366728.6	protein_coding	228140290,228145511,228146026,228146842,228147406,228147615,228148665	228140363,228145624,228146067,228146938,228147544,228147699,228148955	Gene ID= ENSG00000143774.16 TPM= 22.33 Transcript Type= protein_coding
chr1	228140290	228148946	228140290	228148946	+	ENST00000492871.5@GUK1	ENST00000492871.5	protein_coding	228140290,228141124,228145511,228146026,228146861,228147406,228147615,228148371,228148665	228140363,228141288,228145624,228146067,228146938,228147544,228147699,228148456,228148946	Gene ID= ENSG00000143774.16 TPM= 13.83 Transcript Type= processed_transcript
chr1	228165810	228200271	228165810	228200271	+	transcript10791.chr1.nnic@IBA57	transcript10791.chr1.nnic	protein_coding	228165810,228174692,228197568	228166157,228175029,228200271	Gene ID= ENSG00000181873.12 TPM= 3.19 Transcript Type= NA
chr1	228182734	228184427	228182734	228184427	+	transcript10792.chr1.nnic@NA	transcript10792.chr1.nnic	NA	228182734	228184427	Gene ID= novel_gene_chr1_10793 TPM= 5.31 Transcript Type= NA
chr1	228370163	228378874	228370163	228378874	+	transcript10799.chr1.nic@OBSCN	transcript10799.chr1.nic	protein_coding	228370163,228371023,228373932,228374314,228374585,228375702,228376008,228376793,228377052,228377489,228377931,228378271,228378618	228370756,228373081,228374012,228374424,228374752,228375824,228376178,228376874,228377291,228377712,228378006,228378420,228378874	Gene ID= ENSG00000154358.20 TPM= 112.59 Transcript Type= NA
chr1	228283209	228291235	228283209	228291235	+	transcript10814.chr1.nic@OBSCN	transcript10814.chr1.nic	protein_coding	228283209,228288061	228287960,228291235	Gene ID= ENSG00000154358.20 TPM= 6.37 Transcript Type= NA
chr1	228215507	228217425	228215507	228217425	+	transcript10821.chr1.nnic@NA	transcript10821.chr1.nnic	NA	228215507	228217425	Gene ID= novel_gene_chr1_10822 TPM= 3.19 Transcript Type= NA
chr1	228245456	228249050	228245456	228249050	+	transcript10817.chr1.nnic@NA	transcript10817.chr1.nnic	NA	228245456	228249050	Gene ID= novel_gene_chr1_10818 TPM= 3.19 Transcript Type= NA
chr1	228255039	228257169	228255039	228257169	-	transcript10827.chr1.nnic@NA	transcript10827.chr1.nnic	NA	228255039	228257169	Gene ID= novel_gene_chr1_10828 TPM= 22.31 Transcript Type= NA
chr1	228259745	228263574	228259745	228263574	+	transcript10823.chr1.nnic@NA	transcript10823.chr1.nnic	NA	228259745	228263574	Gene ID= novel_gene_chr1_10824 TPM= 2.12 Transcript Type= NA
chr1	228351666	228361249	228351666	228361249	+	transcript10815.chr1.nnic@NA	transcript10815.chr1.nnic	NA	228351666	228361249	Gene ID= novel_gene_chr1_10816 TPM= 163.57 Transcript Type= NA
chr1	228357031	228363272	228357031	228363272	-	transcript10806.chr1.nnic@NA	transcript10806.chr1.nnic	NA	228362924,228362170,228361447,228360890,228357031	228363272,228362338,228361807,228360999,228360624	Gene ID= novel_gene_chr1_10807 TPM= 20.18 Transcript Type= NA
chr1	228393676	228406840	228393676	228406840	-	ENST00000284551.10@TRIM11	ENST00000284551.10	protein_coding	228406154,228402066,228400964,228397143,228396947,228393676	228406840,228402161,228401194,228397165,228397047,228395252	Gene ID= ENSG00000154370.15 TPM= 25.49 Transcript Type= protein_coding
chr1	228456979	228457873	228456979	228457873	-	ENST00000366695.3@HIST3H2A	ENST00000366695.3	protein_coding	228456979	228457873	Gene ID= ENSG00000181218.5 TPM= 13.81 Transcript Type= protein_coding
chr1	228487061	228495766	228487061	228495766	+	ENST00000305943.7@RNF187	ENST00000305943.7	protein_coding	228487061,228488960,228493053,228493883	228487878,228489052,228493274,228495766	Gene ID= ENSG00000168159.11 TPM= 210.31 Transcript Type= protein_coding
chr1	228735077	228746669	228735077	228746669	+	ENST00000366691.3@RHOU	ENST00000366691.3	protein_coding	228735077,228737673,228743285	228736004,228737731,228746669	Gene ID= ENSG00000116574.5 TPM= 7.44 Transcript Type= protein_coding
chr1	228735474	228746664	228735474	228746664	+	transcript10836.chr1.nnic@RHOU	transcript10836.chr1.nnic	protein_coding	228735474,228743285	228736004,228746664	Gene ID= ENSG00000116574.5 TPM= 2.12 Transcript Type= NA
chr1	229271133	229305504	229271133	229305504	+	transcript10846.chr1.nic@RAB4A	transcript10846.chr1.nic	protein_coding	229271133,229286486,229288729,229295848,229297520,229298977,229302862,229303806	229271370,229286566,229288843,229295910,229297636,229299072,229302989,229305504	Gene ID= ENSG00000168118.11 TPM= 4.25 Transcript Type= NA
chr1	229271062	229305891	229271062	229305891	+	ENST00000618010.4@RAB4A	ENST00000618010.4	protein_coding	229271062,229295848,229297520,229298977,229302862,229303806	229271370,229295910,229297636,229299072,229302989,229305891	Gene ID= ENSG00000168118.11 TPM= 1.06 Transcript Type= protein_coding
chr1	229411761	229412775	229411761	229412775	+	transcript10863.chr1.nnic@NA	transcript10863.chr1.nnic	NA	229411761	229412775	Gene ID= novel_gene_chr1_10864 TPM= 2.12 Transcript Type= NA
chr1	229431245	229434094	229431245	229434094	-	ENST00000366684.7@ACTA1	ENST00000366684.7	protein_coding	229434004,229432987,229432556,229432270,229431994,229431721,229431245	229434094,229433127,229432880,229432431,229432185,229431902,229431642	Gene ID= ENSG00000143632.14 TPM= 19158.21 Transcript Type= protein_coding
chr1	229431249	229432101	229431249	229432101	-	transcript10944.chr1.nnic@ACTA1	transcript10944.chr1.nnic	protein_coding	229431975,229431721,229431249	229432101,229431902,229431642	Gene ID= ENSG00000143632.14 TPM= 889.75 Transcript Type= NA
chr1	229431249	229434098	229431249	229434098	-	ENST00000366683.3@ACTA1	ENST00000366683.3	protein_coding	229434004,229432987,229432556,229432407,229431721,229431249	229434098,229433127,229432880,229432431,229431862,229431642	Gene ID= ENSG00000143632.14 TPM= 494.56 Transcript Type= protein_coding
chr1	229516582	229558695	229516582	229558695	-	ENST00000344517.4@ABCB10	ENST00000344517.4	protein_coding	229558136,229549234,229547499,229542237,229540606,229539456,229531636,229530199,229527229,229525936,229521592,229518841,229516582	229558695,229549434,229547701,229542371,229540752,229539591,229531731,229530408,229527308,229526116,229521635,229518875,229518410	Gene ID= ENSG00000135776.4 TPM= 22.31 Transcript Type= protein_coding
chr1	229593121	229626047	229593121	229626047	-	ENST00000258281.6@TAF5L	ENST00000258281.6	protein_coding	229625885,229614341,229610106,229602195,229593121	229626047,229614485,229610210,229602919,229595094	Gene ID= ENSG00000135801.9 TPM= 3.19 Transcript Type= protein_coding
chr1	230067209	230282124	230067209	230282124	+	ENST00000366672.4@GALNT2	ENST00000366672.4	protein_coding	230067209,230178218,230203137,230236014,230236353,230236660,230243306,230246063,230249184,230250457,230255218,230262573,230262922,230265241,230274445,230279303	230067406,230178311,230203290,230236112,230236420,230236725,230243427,230246150,230249271,230250560,230255344,230262665,230263005,230265367,230274564,230282124	Gene ID= ENSG00000143641.9 TPM= 35.05 Transcript Type= protein_coding
chr1	230104759	230107585	230104759	230107585	+	transcript10972.chr1.nnic@NA	transcript10972.chr1.nnic	NA	230104759	230107585	Gene ID= novel_gene_chr1_10973 TPM= 2.12 Transcript Type= NA
chr1	230314482	230426371	230314482	230426371	-	ENST00000391860.6@PGBD5	ENST00000391860.6	protein_coding	230425598,230356894,230350958,230337108,230332844,230325310,230314482	230426371,230357321,230351092,230337288,230333041,230325415,230323620	Gene ID= ENSG00000177614.10 TPM= 15.93 Transcript Type= protein_coding
chr1	230348014	230349554	230348014	230349554	+	transcript10979.chr1.nnic@NA	transcript10979.chr1.nnic	NA	230348014	230349554	Gene ID= novel_gene_chr1_10980 TPM= 3.19 Transcript Type= NA
chr1	230702523	230714297	230702523	230714297	-	ENST00000366667.4@AGT	ENST00000366667.4	protein_coding	230714086,230709995,230705933,230704193,230702523	230714297,230710853,230706200,230704337,230703329	Gene ID= ENSG00000135744.7 TPM= 50.98 Transcript Type= protein_coding
chr1	230796959	230868572	230796959	230868572	-	transcript10996.chr1.nnic@C1orf198	transcript10996.chr1.nnic	protein_coding	230868180,230855668,230843354,230796959	230868572,230855718,230843896,230801735	Gene ID= ENSG00000119280.16 TPM= 5.58 Transcript Type= NA
chr1	230837119	230868653	230837119	230868653	-	ENST00000366663.9@C1orf198	ENST00000366663.9	protein_coding	230868180,230855668,230843354,230837119	230868653,230855718,230843896,230839908	Gene ID= ENSG00000119280.16 TPM= 138.35 Transcript Type= protein_coding
chr1	230801383	230807139	230801383	230807139	-	transcript11004.chr1.nnic@NA	transcript11004.chr1.nnic	NA	230807069,230801383	230807139,230801735	Gene ID= novel_gene_chr1_11005 TPM= 2.12 Transcript Type= NA
chr1	230841234	230842762	230841234	230842762	+	transcript11007.chr1.nnic@NA	transcript11007.chr1.nnic	NA	230841234	230842762	Gene ID= novel_gene_chr1_11008 TPM= 5.31 Transcript Type= NA
chr1	230906244	230978854	230906244	230978854	-	transcript11009.chr1.nnic@TTC13	transcript11009.chr1.nnic	protein_coding	230978560,230961209,230958224,230954333,230945389,230943806,230940440,230939386,230933779,230931736,230931298,230928937,230925517,230924841,230923841,230921421,230920510,230916193,230912623,230911470,230908942,230908712,230907850,230906244	230978854,230961303,230958299,230954403,230945454,230943898,230940556,230939496,230933861,230931877,230931472,230929093,230925647,230924973,230923933,230921504,230920594,230916302,230912758,230911549,230909020,230908791,230908015,230907019	Gene ID= ENSG00000143643.12 TPM= 2.12 Transcript Type= NA
chr1	230906243	230978854	230906243	230978854	-	transcript11010.chr1.nic@TTC13	transcript11010.chr1.nic	protein_coding	230978560,230961209,230958224,230954333,230945389,230943806,230940440,230939386,230933779,230931736,230931298,230928937,230925517,230924841,230923841,230921421,230920510,230916193,230912623,230911470,230908942,230908712,230906243	230978854,230961303,230958299,230954403,230945454,230943898,230940556,230939496,230933861,230931877,230931472,230929093,230925647,230924973,230923933,230921504,230920594,230916299,230912758,230911549,230909020,230908791,230907019	Gene ID= ENSG00000143643.12 TPM= 4.25 Transcript Type= NA
chr1	230906243	230978859	230906243	230978859	-	ENST00000366662.8@TTC13	ENST00000366662.8	protein_coding	230978560,230961209,230958224,230954333,230940440,230939386,230933779,230931736,230931298,230928937,230925517,230924841,230923841,230921421,230920510,230916193,230912623,230911470,230908942,230908712,230906243	230978859,230961303,230958299,230954403,230940556,230939496,230933861,230931877,230931472,230929093,230925647,230924973,230923933,230921504,230920594,230916299,230912758,230911549,230909020,230908791,230907019	Gene ID= ENSG00000143643.12 TPM= 1.06 Transcript Type= protein_coding
chr1	230906243	230978838	230906243	230978838	-	ENST00000366661.8@TTC13	ENST00000366661.8	protein_coding	230978560,230961209,230958224,230954333,230945389,230943806,230940440,230939386,230933779,230931736,230931298,230928937,230925517,230924841,230923841,230921421,230920510,230916193,230912623,230911470,230908942,230908712,230906243	230978838,230961303,230958299,230954403,230945454,230943898,230940556,230939496,230933861,230931877,230931472,230929093,230925647,230924973,230923933,230921504,230920594,230916302,230912758,230911549,230909020,230908791,230907019	Gene ID= ENSG00000143643.12 TPM= 7.44 Transcript Type= protein_coding
chr1	230979070	231000595	230979070	231000595	+	transcript11016.chr1.nic@ARV1	transcript11016.chr1.nic	protein_coding	230979070,230988320,230990110,230990600,230995760,230997121,231000138	230979279,230988439,230990263,230990698,230995984,230997267,231000595	Gene ID= ENSG00000173409.13 TPM= 6.37 Transcript Type= NA
chr1	230979049	231000595	230979049	231000595	+	ENST00000310256.6@ARV1	ENST00000310256.6	protein_coding	230979049,230988320,230990110,230995760,230997121,231000138	230979279,230988439,230990263,230995984,230997267,231000595	Gene ID= ENSG00000173409.13 TPM= 26.55 Transcript Type= protein_coding
chr1	230996459	230997610	230996459	230997610	-	transcript11024.chr1.nnic@NA	transcript11024.chr1.nnic	NA	230996459	230997610	Gene ID= novel_gene_chr1_11025 TPM= 2.12 Transcript Type= NA
chr1	231018958	231040246	231018958	231040246	-	ENST00000366654.4@FAM89A	ENST00000366654.4	protein_coding	231039921,231018958	231040246,231020126	Gene ID= ENSG00000182118.7 TPM= 12.75 Transcript Type= protein_coding
chr1	231223763	231241167	231223763	231241167	-	ENST00000366649.6@C1orf131	ENST00000366649.6	protein_coding	231241024,231238857,231229150,231226973,231226739,231225471,231223763	231241167,231239188,231229209,231227068,231226825,231225523,231224414	Gene ID= ENSG00000143633.12 TPM= 4.25 Transcript Type= protein_coding
chr1	231223763	231241178	231223763	231241178	-	ENST00000366651.7@C1orf131	ENST00000366651.7	protein_coding	231241024,231238857,231229150,231226973,231226739,231225471,231223763	231241178,231239188,231229206,231227068,231226825,231225523,231224414	Gene ID= ENSG00000143633.12 TPM= 6.37 Transcript Type= protein_coding
chr1	231241210	231277973	231241210	231277973	+	ENST00000366647.8@GNPAT	ENST00000366647.8	protein_coding	231241210,231250961,231260507,231262723,231265293,231265712,231266014,231266277,231267680,231270758,231272312,231273922,231275221,231275405,231276135,231277499	231241456,231251143,231260683,231262852,231265420,231265787,231266165,231266407,231267903,231271000,231272391,231274062,231275320,231275498,231276196,231277973	Gene ID= ENSG00000116906.11 TPM= 8.5 Transcript Type= protein_coding
chr1	231330983	231332402	231330983	231332402	+	transcript11051.chr1.nnic@NA	transcript11051.chr1.nnic	NA	231330983	231332402	Gene ID= novel_gene_chr1_11052 TPM= 8.5 Transcript Type= NA
chr1	231332753	231337852	231332753	231337852	-	ENST00000366645.1@EXOC8	ENST00000366645.1	protein_coding	231332753	231337852	Gene ID= ENSG00000116903.7 TPM= 3.19 Transcript Type= protein_coding
chr1	231337104	231353132	231337104	231353132	+	ENST00000391858.8@SPRTN	ENST00000391858.8	protein_coding	231337104,231339769,231347797,231351304	231338604,231339868,231347925,231353132	Gene ID= ENSG00000010072.15 TPM= 2.12 Transcript Type= protein_coding
chr1	231338048	231355023	231338048	231355023	+	ENST00000295050.11@SPRTN	ENST00000295050.11	protein_coding	231338048,231339769,231347797,231351304,231352610	231338604,231339868,231347925,231351571,231355023	Gene ID= ENSG00000010072.15 TPM= 2.12 Transcript Type= protein_coding
chr1	231363751	231425044	231363751	231425044	-	ENST00000366641.3@EGLN1	ENST00000366641.3	protein_coding	231420998,231373980,231370562,231367569,231363751	231425044,231374099,231370698,231367636,231366475	Gene ID= ENSG00000135766.8 TPM= 74.88 Transcript Type= protein_coding
chr1	231363751	231422295	231363751	231422295	-	transcript11065.chr1.nnic@EGLN1	transcript11065.chr1.nnic	protein_coding	231420998,231373980,231367569,231363751	231422295,231374099,231367636,231366475	Gene ID= ENSG00000135766.8 TPM= 8.5 Transcript Type= NA
chr1	231363754	231422301	231363754	231422301	-	transcript11066.chr1.nnic@EGLN1	transcript11066.chr1.nnic	protein_coding	231420998,231373980,231370562,231363754	231422301,231374099,231370698,231366475	Gene ID= ENSG00000135766.8 TPM= 7.97 Transcript Type= NA
chr1	231528653	231566524	231528653	231566524	+	ENST00000366639.8@TSNAX	ENST00000366639.8	protein_coding	231528653,231529255,231537213,231542481,231561128,231564528	231528826,231529359,231537327,231542611,231561255,231566524	Gene ID= ENSG00000116918.13 TPM= 28.68 Transcript Type= protein_coding
chr1	231528671	231564458	231528671	231564458	+	transcript11078.chr1.nic@TSNAX-DISC1	transcript11078.chr1.nic	protein_coding	231528671,231529255,231537213,231542481,231561128	231528826,231529359,231537327,231542611,231564458	Gene ID= ENSG00000270106.5 TPM= 5.31 Transcript Type= NA
chr1	231811492	231847725	231811492	231847725	-	transcript11089.chr1.nnic@NA	transcript11089.chr1.nnic	NA	231847519,231822680,231811492	231847725,231822834,231814291	Gene ID= novel_gene_chr1_11090 TPM= 7.44 Transcript Type= NA
chr1	231811492	231847829	231811492	231847829	-	transcript11091.chr1.nnic@NA	transcript11091.chr1.nnic	NA	231847519,231822725,231811492	231847829,231822834,231814291	Gene ID= novel_gene_chr1_11092 TPM= 25.49 Transcript Type= NA
chr1	231839063	231840748	231839063	231840748	+	transcript11120.chr1.nnic@NA	transcript11120.chr1.nnic	NA	231839063	231840748	Gene ID= novel_gene_chr1_11121 TPM= 2.12 Transcript Type= NA
chr1	231840698	231843483	231840698	231843483	-	transcript11124.chr1.nnic@NA	transcript11124.chr1.nnic	NA	231840698	231843483	Gene ID= novel_gene_chr1_11125 TPM= 4.25 Transcript Type= NA
chr1	231843320	231844930	231843320	231844930	+	transcript11122.chr1.nnic@NA	transcript11122.chr1.nnic	NA	231843320	231844930	Gene ID= novel_gene_chr1_11123 TPM= 3.19 Transcript Type= NA
chr1	232397968	232630128	232397968	232630128	-	transcript11126.chr1.nnic@SIPA1L2	transcript11126.chr1.nnic	protein_coding	232629869,232574174,232533490,232513857,232493527,232490874,232483792,232479627,232471371,232464840,232460887,232445529,232443602,232441768,232441291,232439108,232432247,232428411,232425589,232415494,232403448,232402392,232397968	232630128,232574222,232533583,232515608,232493660,232491062,232483966,232479730,232471528,232465416,232461161,232445786,232443685,232441868,232441394,232439496,232432471,232428564,232425808,232415625,232403571,232402473,232399273	Gene ID= ENSG00000116991.10 TPM= 39.83 Transcript Type= NA
chr1	232437740	232438900	232437740	232438900	+	transcript11158.chr1.nnic@NA	transcript11158.chr1.nnic	NA	232437740	232438900	Gene ID= novel_gene_chr1_11159 TPM= 2.12 Transcript Type= NA
chr1	232453228	232455729	232453228	232455729	+	transcript11154.chr1.nnic@NA	transcript11154.chr1.nnic	NA	232453228	232455729	Gene ID= novel_gene_chr1_11155 TPM= 5.31 Transcript Type= NA
chr1	232492953	232496573	232492953	232496573	+	transcript11156.chr1.nnic@NA	transcript11156.chr1.nnic	NA	232492953	232496573	Gene ID= novel_gene_chr1_11157 TPM= 3.19 Transcript Type= NA
chr1	232804892	232808407	232804892	232808407	+	ENST00000418460.2@MAP10	ENST00000418460.2	protein_coding	232804892	232808407	Gene ID= ENSG00000212916.4 TPM= 3.19 Transcript Type= protein_coding
chr1	232950605	232978482	232950605	232978482	+	ENST00000494689.5@NTPCR	ENST00000494689.5	protein_coding	232950605,232956347,232969909,232978163	232950744,232956443,232970118,232978482	Gene ID= ENSG00000135778.11 TPM= 2.12 Transcript Type= processed_transcript
chr1	232950614	232978751	232950614	232978751	+	ENST00000490807.5@NTPCR	ENST00000490807.5	protein_coding	232950614,232955557,232956347,232978163	232950744,232955719,232956443,232978751	Gene ID= ENSG00000135778.11 TPM= 2.12 Transcript Type= processed_transcript
chr1	233614004	233672512	233614004	233672512	+	ENST00000366621.7@KCNK1	ENST00000366621.7	protein_coding	233614004,233666595,233671271	233614526,233666990,233672512	Gene ID= ENSG00000135750.14 TPM= 2.12 Transcript Type= protein_coding
chr1	234372807	234373593	234372807	234373593	-	ENST00000451795.1@AL355472.1	ENST00000451795.1	antisense_RNA	234373423,234372807	234373593,234373210	Gene ID= ENSG00000231663.1 TPM= 1.06 Transcript Type= antisense_RNA
chr1	234373456	234384049	234373456	234384049	+	ENST00000366615.8@COA6	ENST00000366615.8	protein_coding	234373456,234374230,234383723	234373678,234374389,234384049	Gene ID= ENSG00000168275.14 TPM= 19.12 Transcript Type= protein_coding
chr1	234373701	234384046	234373701	234384046	+	ENST00000366612.1@COA6	ENST00000366612.1	protein_coding	234373701,234383723	234374389,234384046	Gene ID= ENSG00000168275.14 TPM= 1.06 Transcript Type= protein_coding
chr1	234373468	234384048	234373468	234384048	+	ENST00000619305.1@COA6	ENST00000619305.1	protein_coding	234373468,234374230,234383723	234373678,234374389,234384048	Gene ID= ENSG00000168275.14 TPM= 13.81 Transcript Type= protein_coding
chr1	234373683	234384045	234373683	234384045	+	ENST00000366613.1@COA6	ENST00000366613.1	protein_coding	234373683,234374230,234383723	234373840,234374389,234384045	Gene ID= ENSG00000168275.14 TPM= 10.62 Transcript Type= protein_coding
chr1	234604269	234609525	234604269	234609525	-	ENST00000366609.3@IRF2BP2	ENST00000366609.3	protein_coding	234608447,234604269	234609525,234607852	Gene ID= ENSG00000168264.10 TPM= 48.86 Transcript Type= protein_coding
chr1	234606747	234610159	234606747	234610159	-	transcript11197.chr1.nnic@NA	transcript11197.chr1.nnic	NA	234606747	234610159	Gene ID= novel_gene_chr1_11198 TPM= 8.5 Transcript Type= NA
chr1	235109336	235128936	235109336	235128936	-	ENST00000366607.4@TOMM20	ENST00000366607.4	protein_coding	235128595,235122326,235119818,235113768,235109336	235128936,235122372,235119899,235113910,235112108	Gene ID= ENSG00000173726.10 TPM= 91.35 Transcript Type= protein_coding
chr1	235131183	235161457	235131183	235161457	-	ENST00000408888.7@RBM34	ENST00000408888.7	protein_coding	235161174,235160893,235160511,235154881,235152706,235148404,235138091,235137877,235136034,235135652,235131183	235161457,235161067,235160647,235155112,235152765,235148447,235138174,235137940,235136073,235135770,235131997	Gene ID= ENSG00000188739.14 TPM= 6.37 Transcript Type= protein_coding
chr1	235131649	235161287	235131649	235161287	-	transcript11210.chr1.nic@RBM34	transcript11210.chr1.nic	protein_coding	235161174,235160893,235154881,235152706,235148404,235138091,235137877,235136034,235135652,235131649	235161287,235161067,235155112,235152765,235148447,235138174,235137940,235136073,235135770,235131997	Gene ID= ENSG00000188739.14 TPM= 5.31 Transcript Type= NA
chr1	235166895	235328219	235166895	235328219	-	ENST00000349213.7@ARID4B	ENST00000349213.7	protein_coding	235327769,235326914,235260642,235257160,235255660,235252730,235246420,235240313,235234413,235231113,235229231,235224703,235223166,235221565,235220302,235219793,235196031,235194013,235181585,235177800,235175184,235172618,235166895	235328219,235326968,235260752,235257225,235255750,235252809,235246511,235240451,235234492,235231189,235229385,235224775,235223260,235221662,235220545,235219968,235196115,235194211,235182793,235177913,235175399,235172764,235168652	Gene ID= ENSG00000054267.21 TPM= 1.06 Transcript Type= protein_coding
chr1	235328570	235344532	235328570	235344532	+	ENST00000282841.9@GGPS1	ENST00000282841.9	protein_coding	235328570,235335242,235341708,235342011	235328778,235335334,235341778,235344532	Gene ID= ENSG00000152904.11 TPM= 19.12 Transcript Type= protein_coding
chr1	235328571	235343138	235328571	235343138	+	ENST00000391855.2@GGPS1	ENST00000391855.2	protein_coding	235328571,235341708,235342011	235328778,235341778,235343138	Gene ID= ENSG00000152904.11 TPM= 6.37 Transcript Type= protein_coding
chr1	235447213	235504476	235447213	235504476	-	transcript11231.chr1.nic@B3GALNT2	transcript11231.chr1.nic	protein_coding	235504141,235496186,235494681,235489168,235484322,235480054,235470850,235465636,235458603,235455559,235454156,235453090,235447213	235504476,235496308,235494828,235489268,235484515,235480149,235470960,235465714,235458786,235455684,235454315,235453146,235450340	Gene ID= ENSG00000162885.12 TPM= 6.37 Transcript Type= NA
chr1	235449923	235504481	235449923	235504481	-	ENST00000366600.7@B3GALNT2	ENST00000366600.7	protein_coding	235504141,235494681,235489168,235484322,235480054,235470850,235465636,235458603,235455559,235454156,235453090,235449923	235504481,235494828,235489268,235484515,235480149,235470960,235465714,235458786,235455684,235454315,235453146,235450340	Gene ID= ENSG00000162885.12 TPM= 2.12 Transcript Type= protein_coding
chr1	235494457	235504477	235494457	235504477	-	transcript11243.chr1.nic@B3GALNT2	transcript11243.chr1.nic	protein_coding	235504141,235494457	235504477,235494828	Gene ID= ENSG00000162885.12 TPM= 2.12 Transcript Type= NA
chr1	235975830	236065109	235975830	236065109	-	ENST00000366595.7@NID1	ENST00000366595.7	protein_coding	236064855,236048690,236045457,236041910,236038104,236032401,236029550,236025896,236024070,235993645,235990886,235985379,235981611,235980496,235979822,235978995,235975830	236065109,236048989,236045683,236042292,236038253,236032652,236029750,236026141,236024213,235993872,235991058,235985505,235981782,235980653,235979945,235979107,235977988	Gene ID= ENSG00000116962.14 TPM= 5.84 Transcript Type= protein_coding
chr1	235975830	236065162	235975830	236065162	-	ENST00000264187.6@NID1	ENST00000264187.6	protein_coding	236064855,236048690,236045457,236041910,236038104,236032401,236029550,236025896,236024070,236017148,236013411,236011921,235993645,235990886,235985379,235981611,235980496,235979822,235978995,235975830	236065162,236048989,236045683,236042292,236038253,236032652,236029750,236026141,236024213,236017273,236013560,236012043,235993872,235991058,235985505,235981782,235980653,235979945,235979107,235977988	Gene ID= ENSG00000116962.14 TPM= 18.59 Transcript Type= protein_coding
chr1	236063538	236065091	236063538	236065091	-	transcript11254.chr1.nnic@NA	transcript11254.chr1.nnic	NA	236063538	236065091	Gene ID= novel_gene_chr1_11255 TPM= 2.12 Transcript Type= NA
chr1	236142514	236208909	236142514	236208909	+	transcript11261.chr1.nnic@GPR137B	transcript11261.chr1.nnic	protein_coding	236142514,236145702,236168706,236178414,236179879,236183778,236205126,236208050	236143036,236145848,236168755,236178636,236180028,236183906,236205250,236208909	Gene ID= ENSG00000077585.13 TPM= 3.19 Transcript Type= NA
chr1	236142936	236208909	236142936	236208909	+	transcript11264.chr1.nic@GPR137B	transcript11264.chr1.nic	protein_coding	236142936,236178414,236179879,236183778,236205126,236208050	236143036,236178636,236180028,236183906,236205250,236208909	Gene ID= ENSG00000077585.13 TPM= 2.12 Transcript Type= NA
chr1	236142532	236208909	236142532	236208909	+	ENST00000366592.7@GPR137B	ENST00000366592.7	protein_coding	236142532,236168706,236178414,236179879,236183778,236205126,236208050	236143036,236168755,236178636,236180028,236183906,236205250,236208909	Gene ID= ENSG00000077585.13 TPM= 64.79 Transcript Type= protein_coding
chr1	236215555	236281985	236215555	236281985	-	ENST00000354619.9@ERO1B	ENST00000354619.9	protein_coding	236281682,236269875,236253422,236252050,236249885,236243422,236236278,236235789,236232828,236230224,236226647,236226269,236225070,236221924,236220832,236215555	236281985,236269994,236253505,236252091,236249967,236243495,236236398,236235835,236232839,236230250,236226739,236226515,236225139,236222010,236220965,236218576	Gene ID= ENSG00000086619.13 TPM= 5.31 Transcript Type= protein_coding
chr1	236523599	236551010	236523599	236551010	+	ENST00000366584.8@LGALS8	ENST00000366584.8	protein_coding	236523599,236525968,236537497,236538879,236540564,236541654,236542761,236543560,236544750,236548012	236524061,236526115,236537585,236539089,236540683,236541710,236542787,236543648,236544915,236551010	Gene ID= ENSG00000116977.18 TPM= 18.06 Transcript Type= protein_coding
chr1	236549631	236552416	236549631	236552416	+	transcript11279.chr1.nnic@NA	transcript11279.chr1.nnic	NA	236549631	236552416	Gene ID= novel_gene_chr1_11280 TPM= 8.5 Transcript Type= NA
chr1	236686508	236764631	236686508	236764631	+	ENST00000366578.5@ACTN2	ENST00000366578.5	protein_coding	236686508,236717858,236718894,236720105,236725933,236727678,236731233,236735635,236737122,236739302,236742896,236744626,236747667,236749124,236751470,236753947,236755019,236757486,236759724,236761015,236762461	236686799,236717972,236719013,236720191,236726020,236727756,236731314,236735720,236737214,236739532,236743043,236744776,236747775,236749264,236751652,236754081,236755198,236757632,236759789,236761173,236764631	Gene ID= ENSG00000077522.12 TPM= 340.03 Transcript Type= protein_coding
chr1	236686298	236757566	236686298	236757566	+	transcript11352.chr1.nic@ACTN2	transcript11352.chr1.nic	protein_coding	236686298,236717858,236718894,236720105,236725933,236727678,236731233,236735635,236737122,236739302,236742896,236744626,236747667,236749124,236751470,236753947,236755019,236757486	236686799,236717972,236719013,236720191,236726020,236727756,236731314,236735720,236737214,236739532,236743043,236744776,236747775,236749264,236751652,236754081,236755198,236757566	Gene ID= ENSG00000077522.12 TPM= 326.99 Transcript Type= NA
chr1	236697936	236701259	236697936	236701259	-	transcript11397.chr1.nnic@NA	transcript11397.chr1.nnic	NA	236697936	236701259	Gene ID= novel_gene_chr1_11398 TPM= 40.36 Transcript Type= NA
chr1	236703435	236710119	236703435	236710119	-	transcript11403.chr1.nnic@NA	transcript11403.chr1.nnic	NA	236703435	236710119	Gene ID= novel_gene_chr1_11404 TPM= 37.18 Transcript Type= NA
chr1	236732427	236736878	236732427	236736878	-	transcript11399.chr1.nnic@NA	transcript11399.chr1.nnic	NA	236732427	236736878	Gene ID= novel_gene_chr1_11400 TPM= 29.74 Transcript Type= NA
chr1	236795260	236862298	236795260	236862298	+	transcript11410.chr1.nic@MTR	transcript11410.chr1.nic	protein_coding	236795260,236803428,236806144,236808704,236810503,236812738,236815604,236816449,236824119,236825338,236826829,236829189,236831966,236835547,236838414,236850344,236852521,236852948,236859833,236861125,236862236	236795737,236803642,236806233,236808773,236810595,236812844,236815663,236816543,236824219,236825399,236826896,236829268,236832078,236835687,236838599,236850523,236852637,236853088,236859922,236861277,236862298	Gene ID= ENSG00000116984.12 TPM= 10.62 Transcript Type= NA
chr1	236890888	236900666	236890888	236900666	+	transcript11414.chr1.nnic@MTR	transcript11414.chr1.nnic	protein_coding	236890888,236891133,236894357,236895358,236897006,236897558	236891038,236891329,236894557,236895550,236897118,236900666	Gene ID= ENSG00000116984.12 TPM= 8.5 Transcript Type= NA
chr1	236998090	237002957	236998090	237002957	+	transcript11417.chr1.nnic@NA	transcript11417.chr1.nnic	NA	236998090,237001367	236998263,237002957	Gene ID= novel_gene_chr1_11418 TPM= 2.12 Transcript Type= NA
chr1	237044645	237047680	237044645	237047680	-	transcript11437.chr1.nnic@NA	transcript11437.chr1.nnic	NA	237044645	237047680	Gene ID= novel_gene_chr1_11438 TPM= 10.62 Transcript Type= NA
chr1	237047391	237052994	237047391	237052994	-	transcript11433.chr1.nnic@NA	transcript11433.chr1.nnic	NA	237047391	237052994	Gene ID= novel_gene_chr1_11434 TPM= 109.4 Transcript Type= NA
chr1	237048143	237050728	237048143	237050728	+	transcript11431.chr1.nnic@NA	transcript11431.chr1.nnic	NA	237048143	237050728	Gene ID= novel_gene_chr1_11432 TPM= 4.25 Transcript Type= NA
chr1	237052704	237054316	237052704	237054316	-	transcript11451.chr1.nnic@NA	transcript11451.chr1.nnic	NA	237052704	237054316	Gene ID= novel_gene_chr1_11452 TPM= 3.19 Transcript Type= NA
chr1	237063349	237063878	237063349	237063878	-	transcript11443.chr1.nnic@NA	transcript11443.chr1.nnic	NA	237063349	237063878	Gene ID= novel_gene_chr1_11444 TPM= 6.37 Transcript Type= NA
chr1	237065271	237068831	237065271	237068831	-	transcript11445.chr1.nnic@NA	transcript11445.chr1.nnic	NA	237065271	237068831	Gene ID= novel_gene_chr1_11446 TPM= 38.24 Transcript Type= NA
chr1	237081194	237084172	237081194	237084172	-	transcript11447.chr1.nnic@NA	transcript11447.chr1.nnic	NA	237081194	237084172	Gene ID= novel_gene_chr1_11448 TPM= 7.44 Transcript Type= NA
chr1	237092516	237098074	237092516	237098074	-	transcript11439.chr1.nnic@NA	transcript11439.chr1.nnic	NA	237092516	237098074	Gene ID= novel_gene_chr1_11440 TPM= 24.43 Transcript Type= NA
chr1	237096672	237099115	237096672	237099115	+	transcript11427.chr1.nnic@NA	transcript11427.chr1.nnic	NA	237096672	237099115	Gene ID= novel_gene_chr1_11428 TPM= 2.12 Transcript Type= NA
chr1	237104975	237107534	237104975	237107534	+	transcript11429.chr1.nnic@NA	transcript11429.chr1.nnic	NA	237104975	237107534	Gene ID= novel_gene_chr1_11430 TPM= 10.62 Transcript Type= NA
chr1	237106582	237109730	237106582	237109730	+	transcript11425.chr1.nnic@NA	transcript11425.chr1.nnic	NA	237106582	237109730	Gene ID= novel_gene_chr1_11426 TPM= 6.37 Transcript Type= NA
chr1	237042205	237833988	237042205	237833988	+	ENST00000366574.6@RYR2	ENST00000366574.6	protein_coding	237042205,237270497,237330878,237355965,237364358,237369534,237374717,237377323,237387281,237388087,237417049,237423092,237441319,237445401,237454391,237456600,237469092,237491806,237492954,237496511,237500711,237503289,237506710,237511688,237530427,237548431,237550544,237566567,237569145,237589793,237590640,237591739,237593476,237595498,237602025,237610762,237614039,237617286,237623765,237625661,237627807,237631427,237633578,237634889,237638357,237639015,237640897,237643327,237648444,237649877,237651411,237654274,237655821,237657944,237659985,237660810,237666512,237667883,237674096,237674731,237678048,237680456,237687455,237698965,237700229,237701978,237705213,237706949,237708858,237709480,237711745,237717198,237718462,237723128,237726273,237727087,237730260,237732046,237733705,237742296,237756288,237757697,237759776,237760955,237770807,237772012,237773520,237778666,237781565,237783675,237785969,237787988,237791429,237792105,237793867,237795289,237798037,237801856,237806137,237808901,237819036,237828381,237830530,237831514,237832552	237042569,237270616,237330982,237355985,237364372,237369608,237374795,237377435,237387380,237388183,237417123,237423248,237441483,237445522,237454574,237456735,237469187,237491924,237493087,237496752,237500903,237503505,237506814,237511791,237530510,237548590,237550691,237566775,237569319,237590001,237590992,237591853,237593636,237595657,237602111,237610988,237614843,237617486,237623870,237625804,237628080,237631541,237633710,237634992,237638492,237639201,237641002,237643447,237648613,237650097,237651501,237654414,237655984,237658022,237660074,237660947,237666589,237667958,237674219,237674846,237678112,237680577,237687504,237699025,237700467,237702059,237705343,237707269,237709098,237709567,237711837,237717368,237718521,237723262,237726308,237727199,237730356,237732149,237733756,237742349,237756387,237757776,237759852,237761028,237770887,237772100,237773648,237778770,237781646,237784972,237786036,237788135,237791515,237792323,237793997,237795331,237798170,237801916,237806283,237809035,237819192,237828445,237830630,237831565,237833988	Gene ID= ENSG00000198626.15 TPM= 130.47 Transcript Type= protein_coding
chr1	237127203	237130549	237127203	237130549	+	transcript11505.chr1.nnic@NA	transcript11505.chr1.nnic	NA	237127203	237130549	Gene ID= novel_gene_chr1_11506 TPM= 2.12 Transcript Type= NA
chr1	237135534	237136149	237135534	237136149	-	transcript11549.chr1.nnic@NA	transcript11549.chr1.nnic	NA	237135534	237136149	Gene ID= novel_gene_chr1_11550 TPM= 5.31 Transcript Type= NA
chr1	237143566	237144145	237143566	237144145	+	transcript11507.chr1.nnic@NA	transcript11507.chr1.nnic	NA	237143566	237144145	Gene ID= novel_gene_chr1_11508 TPM= 2.12 Transcript Type= NA
chr1	237167710	237169575	237167710	237169575	-	transcript11545.chr1.nnic@NA	transcript11545.chr1.nnic	NA	237167710	237169575	Gene ID= novel_gene_chr1_11546 TPM= 28.68 Transcript Type= NA
chr1	237184879	237189047	237184879	237189047	-	transcript11541.chr1.nnic@NA	transcript11541.chr1.nnic	NA	237184879	237189047	Gene ID= novel_gene_chr1_11542 TPM= 8.5 Transcript Type= NA
chr1	237187445	237189851	237187445	237189851	-	transcript11531.chr1.nnic@NA	transcript11531.chr1.nnic	NA	237187445	237189851	Gene ID= novel_gene_chr1_11532 TPM= 63.73 Transcript Type= NA
chr1	237200283	237204516	237200283	237204516	+	transcript11509.chr1.nnic@NA	transcript11509.chr1.nnic	NA	237200283	237204516	Gene ID= novel_gene_chr1_11510 TPM= 4.25 Transcript Type= NA
chr1	237204290	237207157	237204290	237207157	+	transcript11497.chr1.nnic@NA	transcript11497.chr1.nnic	NA	237204290	237207157	Gene ID= novel_gene_chr1_11498 TPM= 6.37 Transcript Type= NA
chr1	237270497	237272141	237270497	237272141	+	transcript11499.chr1.nnic@NA	transcript11499.chr1.nnic	NA	237270497	237272141	Gene ID= novel_gene_chr1_11500 TPM= 12.75 Transcript Type= NA
chr1	237270497	237274418	237270497	237274418	+	transcript11501.chr1.nnic@NA	transcript11501.chr1.nnic	NA	237270497	237274418	Gene ID= novel_gene_chr1_11502 TPM= 5.31 Transcript Type= NA
chr1	237281952	237284393	237281952	237284393	+	transcript11511.chr1.nnic@NA	transcript11511.chr1.nnic	NA	237281952	237284393	Gene ID= novel_gene_chr1_11512 TPM= 3.19 Transcript Type= NA
chr1	237284326	237286560	237284326	237286560	-	transcript11561.chr1.nnic@NA	transcript11561.chr1.nnic	NA	237284326	237286560	Gene ID= novel_gene_chr1_11562 TPM= 3.19 Transcript Type= NA
chr1	237286900	237287384	237286900	237287384	-	transcript11563.chr1.nnic@NA	transcript11563.chr1.nnic	NA	237286900	237287384	Gene ID= novel_gene_chr1_11564 TPM= 2.12 Transcript Type= NA
chr1	237297928	237301933	237297928	237301933	-	transcript11535.chr1.nnic@NA	transcript11535.chr1.nnic	NA	237297928	237301933	Gene ID= novel_gene_chr1_11536 TPM= 6.37 Transcript Type= NA
chr1	237303294	237309524	237303294	237309524	-	transcript11553.chr1.nnic@NA	transcript11553.chr1.nnic	NA	237303294	237309524	Gene ID= novel_gene_chr1_11554 TPM= 14.87 Transcript Type= NA
chr1	237331673	237337340	237331673	237337340	-	transcript11537.chr1.nnic@NA	transcript11537.chr1.nnic	NA	237331673	237337340	Gene ID= novel_gene_chr1_11538 TPM= 19.12 Transcript Type= NA
chr1	237356709	237363095	237356709	237363095	+	transcript11513.chr1.nnic@NA	transcript11513.chr1.nnic	NA	237356709	237363095	Gene ID= novel_gene_chr1_11514 TPM= 2.12 Transcript Type= NA
chr1	237383419	237384485	237383419	237384485	-	transcript11543.chr1.nnic@NA	transcript11543.chr1.nnic	NA	237383419	237384485	Gene ID= novel_gene_chr1_11544 TPM= 29.74 Transcript Type= NA
chr1	237437089	237439841	237437089	237439841	+	transcript11515.chr1.nnic@NA	transcript11515.chr1.nnic	NA	237437089	237439841	Gene ID= novel_gene_chr1_11516 TPM= 2.12 Transcript Type= NA
chr1	237530673	237535290	237530673	237535290	+	transcript11521.chr1.nnic@NA	transcript11521.chr1.nnic	NA	237530673	237535290	Gene ID= novel_gene_chr1_11522 TPM= 3.19 Transcript Type= NA
chr1	237559277	237563422	237559277	237563422	+	transcript11503.chr1.nnic@NA	transcript11503.chr1.nnic	NA	237559277	237563422	Gene ID= novel_gene_chr1_11504 TPM= 3.19 Transcript Type= NA
chr1	237580157	237582575	237580157	237582575	-	transcript11547.chr1.nnic@NA	transcript11547.chr1.nnic	NA	237580157	237582575	Gene ID= novel_gene_chr1_11548 TPM= 10.62 Transcript Type= NA
chr1	237592885	237596509	237592885	237596509	+	transcript11523.chr1.nnic@NA	transcript11523.chr1.nnic	NA	237592885	237596509	Gene ID= novel_gene_chr1_11524 TPM= 10.62 Transcript Type= NA
chr1	237632391	237636498	237632391	237636498	-	transcript11559.chr1.nnic@NA	transcript11559.chr1.nnic	NA	237632391	237636498	Gene ID= novel_gene_chr1_11560 TPM= 7.44 Transcript Type= NA
chr1	237679894	237682048	237679894	237682048	+	transcript11525.chr1.nnic@NA	transcript11525.chr1.nnic	NA	237679894	237682048	Gene ID= novel_gene_chr1_11526 TPM= 2.12 Transcript Type= NA
chr1	237696542	237700345	237696542	237700345	-	transcript11539.chr1.nnic@NA	transcript11539.chr1.nnic	NA	237696542	237700345	Gene ID= novel_gene_chr1_11540 TPM= 5.31 Transcript Type= NA
chr1	237728791	237731365	237728791	237731365	+	transcript11527.chr1.nnic@NA	transcript11527.chr1.nnic	NA	237728791	237731365	Gene ID= novel_gene_chr1_11528 TPM= 2.12 Transcript Type= NA
chr1	237749958	237752474	237749958	237752474	+	transcript11495.chr1.nnic@NA	transcript11495.chr1.nnic	NA	237749958	237752474	Gene ID= novel_gene_chr1_11496 TPM= 7.44 Transcript Type= NA
chr1	237805596	237807509	237805596	237807509	-	transcript11529.chr1.nnic@NA	transcript11529.chr1.nnic	NA	237805596	237807509	Gene ID= novel_gene_chr1_11530 TPM= 10.62 Transcript Type= NA
chr1	237813663	237813864	237813663	237813864	+	transcript11517.chr1.nnic@NA	transcript11517.chr1.nnic	NA	237813663	237813864	Gene ID= novel_gene_chr1_11518 TPM= 2.12 Transcript Type= NA
chr1	237833215	237836659	237833215	237836659	-	transcript11533.chr1.nnic@NA	transcript11533.chr1.nnic	NA	237833215	237836659	Gene ID= novel_gene_chr1_11534 TPM= 110.46 Transcript Type= NA
chr1	241497603	241519761	241497603	241519761	-	ENST00000366560.3@FH	ENST00000366560.3	protein_coding	241519591,241517182,241513603,241511967,241508603,241506003,241504042,241502443,241500437,241497603	241519761,241517316,241513713,241512143,241508785,241506168,241504245,241502570,241500590,241497970	Gene ID= ENSG00000091483.6 TPM= 120.02 Transcript Type= protein_coding
chr1	241593602	241640355	241593602	241640355	-	ENST00000490673.5@OPN3	ENST00000490673.5	protein_coding	241639882,241597746,241593602	241640355,241597997,241594691	Gene ID= ENSG00000054277.13 TPM= 3.19 Transcript Type= nonsense_mediated_decay
chr1	242520161	242523456	242520161	242523456	+	transcript11582.chr1.nnic@NA	transcript11582.chr1.nnic	NA	242520161	242523456	Gene ID= novel_gene_chr1_11583 TPM= 2.12 Transcript Type= NA
chr1	243165096	243255817	243165096	243255817	-	transcript11600.chr1.nic@CEP170	transcript11600.chr1.nic	protein_coding	243255040,243225176,243221724,243211886,243200777,243200518,243199060,243191018,243186259,243185779,243172697,243169628,243165096	243255817,243225321,243221813,243211964,243200835,243200680,243199194,243191494,243186422,243186072,243172846,243169754,243166116	Gene ID= ENSG00000143702.15 TPM= 2.12 Transcript Type= NA
chr1	243164980	243255817	243164980	243255817	-	transcript11603.chr1.nic@CEP170	transcript11603.chr1.nic	protein_coding	243255040,243225176,243221724,243211886,243200777,243200518,243199060,243191018,243186259,243172697,243169628,243164980	243255817,243225321,243221813,243211964,243200835,243200680,243199194,243191494,243186422,243172846,243169754,243166116	Gene ID= ENSG00000143702.15 TPM= 3.19 Transcript Type= NA
chr1	243165096	243255754	243165096	243255754	-	transcript11604.chr1.nic@CEP170	transcript11604.chr1.nic	protein_coding	243255040,243225176,243221724,243211886,243200777,243200518,243199060,243191018,243185779,243172697,243169628,243165096	243255754,243225321,243221813,243211964,243200835,243200680,243199194,243191494,243186422,243172846,243169754,243166116	Gene ID= ENSG00000143702.15 TPM= 3.19 Transcript Type= NA
chr1	243182973	243186048	243182973	243186048	-	transcript11626.chr1.nnic@NA	transcript11626.chr1.nnic	NA	243182973	243186048	Gene ID= novel_gene_chr1_11627 TPM= 2.12 Transcript Type= NA
chr1	243256042	243306440	243256042	243306440	+	transcript11614.chr1.nic@SDCCAG8	transcript11614.chr1.nic	protein_coding	243256042,243270105,243270978,243274543,243286272,243293091,243304713,243305012	243256240,243270257,243271063,243274656,243286397,243293219,243304777,243306440	Gene ID= ENSG00000054282.15 TPM= 3.19 Transcript Type= NA
chr1	243256056	243500092	243256056	243500092	+	ENST00000366541.7@SDCCAG8	ENST00000366541.7	protein_coding	243256056,243270105,243270978,243274543,243286272,243293091,243304713,243307989,243316755,243330540,243341039,243344215,243378721,243415702,243417968,243426427,243489014,243499756	243256240,243270257,243271063,243274656,243286397,243293219,243304777,243308177,243316893,243330692,243341173,243344331,243378863,243415829,243418076,243426558,243489140,243500092	Gene ID= ENSG00000054282.15 TPM= 3.19 Transcript Type= protein_coding
chr1	243494792	243495496	243494792	243495496	-	transcript11628.chr1.nnic@NA	transcript11628.chr1.nnic	NA	243494792	243495496	Gene ID= novel_gene_chr1_11629 TPM= 2.12 Transcript Type= NA
chr1	244408494	244452134	244408494	244452134	-	ENST00000366535.3@ADSS	ENST00000366535.3	protein_coding	244451635,244437666,244436825,244432545,244424321,244423953,244422835,244420170,244418760,244417628,244415981,244411287,244408494	244452134,244437768,244436893,244432595,244424387,244424060,244422916,244420296,244418914,244417752,244416078,244411436,244409638	Gene ID= ENSG00000035687.9 TPM= 8.5 Transcript Type= protein_coding
chr1	244652935	244709033	244652935	244709033	+	ENST00000302550.15@DESI2	ENST00000302550.15	protein_coding	244652935,244686597,244689249,244691879,244705556	244653355,244686669,244689342,244692020,244709033	Gene ID= ENSG00000121644.18 TPM= 39.3 Transcript Type= protein_coding
chr1	244653069	244689144	244653069	244689144	+	transcript11645.chr1.nic@DESI2	transcript11645.chr1.nic	protein_coding	244653069,244686597	244653355,244689144	Gene ID= ENSG00000121644.18 TPM= 2.12 Transcript Type= NA
chr1	244653126	244656521	244653126	244656521	+	ENST00000484738.1@DESI2	ENST00000484738.1	protein_coding	244653126,244656296	244654025,244656521	Gene ID= ENSG00000121644.18 TPM= 1.06 Transcript Type= processed_transcript
chr1	244653103	244705951	244653103	244705951	+	ENST00000263831.11@DESI2	ENST00000263831.11	protein_coding	244653103,244686597,244691884,244705556	244653355,244686669,244692020,244705951	Gene ID= ENSG00000121644.18 TPM= 5.31 Transcript Type= protein_coding
chr1	244835322	244845057	244835322	244845057	+	ENST00000411948.6@COX20	ENST00000411948.6	protein_coding	244835322,244841944,244842195,244843041	244835756,244842058,244842258,244845057	Gene ID= ENSG00000203667.9 TPM= 45.67 Transcript Type= protein_coding
chr1	244835656	244843880	244835656	244843880	+	ENST00000391839.6@COX20	ENST00000391839.6	protein_coding	244835656,244842195,244843041	244835756,244842258,244843880	Gene ID= ENSG00000203667.9 TPM= 8.5 Transcript Type= processed_transcript
chr1	244856008	244864577	244856008	244864577	-	transcript11659.chr1.nic@HNRNPU	transcript11659.chr1.nic	protein_coding	244863617,244862619,244862461,244860335,244859275,244858729,244858011,244857598,244856728,244856457,244856008	244864577,244862730,244862534,244860474,244859374,244858841,244858274,244857717,244856856,244856625,244856158	Gene ID= ENSG00000153187.18 TPM= 16.99 Transcript Type= NA
chr1	244856008	244864545	244856008	244864545	-	transcript11660.chr1.nic@HNRNPU	transcript11660.chr1.nic	protein_coding	244863674,244862619,244862461,244860335,244859275,244858729,244858011,244857598,244856728,244856457,244856008	244864545,244862730,244862534,244860474,244859374,244858841,244858274,244857717,244856856,244856625,244856158	Gene ID= ENSG00000153187.18 TPM= 14.87 Transcript Type= NA
chr1	244969231	244970326	244969231	244970326	-	transcript11700.chr1.nnic@NA	transcript11700.chr1.nnic	NA	244969231	244970326	Gene ID= novel_gene_chr1_11701 TPM= 3.19 Transcript Type= NA
chr1	244970351	245087794	244970351	245087794	+	ENST00000473686.5@EFCAB2	ENST00000473686.5	protein_coding	244970351,245059386,245082083,245083442,245083622,245087245	244970443,245059458,245082162,245083484,245083688,245087794	Gene ID= ENSG00000203666.12 TPM= 2.12 Transcript Type= processed_transcript
chr1	244970390	245122991	244970390	245122991	+	ENST00000487845.5@EFCAB2	ENST00000487845.5	protein_coding	244970390,245059386,245082083,245083442,245083622,245121920	244970443,245059458,245082162,245083484,245083688,245122991	Gene ID= ENSG00000203666.12 TPM= 2.12 Transcript Type= processed_transcript
chr1	246540560	246566324	246540560	246566324	-	ENST00000366514.4@TFB2M	ENST00000366514.4	protein_coding	246565826,246564346,246557381,246556573,246551213,246548545,246544521,246540560	246566324,246564434,246557534,246556721,246551302,246548607,246544681,246541202	Gene ID= ENSG00000162851.7 TPM= 24.43 Transcript Type= protein_coding
chr1	246724047	246768137	246724047	246768137	+	ENST00000366510.3@SCCPDH	ENST00000366510.3	protein_coding	246724047,246726892,246735975,246740172,246744076,246758226,246759034,246759957,246760171,246764246,246766058,246767195	246724612,246727004,246736055,246740301,246744125,246758356,246759151,246760076,246760227,246764357,246766139,246768137	Gene ID= ENSG00000143653.9 TPM= 9.56 Transcript Type= protein_coding
chr1	246724381	246767460	246724381	246767460	+	transcript11721.chr1.nnic@SCCPDH	transcript11721.chr1.nnic	protein_coding	246724381,246726892,246740172,246744076,246758226,246759034,246759957,246760171,246764246,246766058,246767195	246724612,246727004,246740301,246744125,246758356,246759151,246760076,246760227,246764357,246766139,246767460	Gene ID= ENSG00000143653.9 TPM= 3.19 Transcript Type= NA
chr1	247110160	247112417	247110160	247112417	-	ENST00000623686.1@C1orf229	ENST00000623686.1	lincRNA	247110160	247112417	Gene ID= ENSG00000221953.5 TPM= 2.12 Transcript Type= lincRNA
chr1	247150071	247152297	247150071	247152297	+	transcript11734.chr1.nnic@NA	transcript11734.chr1.nnic	NA	247150071	247152297	Gene ID= novel_gene_chr1_11735 TPM= 2.12 Transcript Type= NA
chr1	247297412	247313852	247297412	247313852	-	ENST00000462139.1@ZNF496	ENST00000462139.1	protein_coding	247308475,247297412	247313852,247301276	Gene ID= ENSG00000162714.12 TPM= 5.31 Transcript Type= processed_transcript
chr1	247331294	247334576	247331294	247334576	+	transcript11743.chr1.nnic@NA	transcript11743.chr1.nnic	NA	247331294	247334576	Gene ID= novel_gene_chr1_11744 TPM= 12.75 Transcript Type= NA
chr1	248810451	248826633	248810451	248826633	-	ENST00000366472.5@SH3BP5L	ENST00000366472.5	protein_coding	248825835,248824753,248816822,248816534,248814449,248812989,248810451	248826633,248825366,248816884,248816662,248814610,248813162,248812370	Gene ID= ENSG00000175137.10 TPM= 7.44 Transcript Type= protein_coding
chr1	248838280	248849517	248838280	248849517	+	ENST00000306562.7@ZNF672	ENST00000306562.7	protein_coding	248838280,248844483,248845566,248847052	248838551,248844636,248845662,248849517	Gene ID= ENSG00000171161.12 TPM= 80.72 Transcript Type= protein_coding
chr1	248850008	248859116	248850008	248859116	-	transcript11764.chr1.nic@ZNF692	transcript11764.chr1.nic	protein_coding	248858918,248857234,248856514,248856288,248855725,248855558,248855380,248853937,248850682,248850008	248859116,248858321,248856562,248856422,248855946,248855635,248855458,248854051,248850781,248850516	Gene ID= ENSG00000171163.15 TPM= 4.96 Transcript Type= NA
chr1	248850008	248859116	248850008	248859116	-	transcript11767.chr1.nic@ZNF692	transcript11767.chr1.nic	protein_coding	248858918,248857234,248856514,248856288,248855558,248855380,248853937,248850682,248850008	248859116,248858321,248856562,248856422,248855946,248855458,248854051,248850781,248850516	Gene ID= ENSG00000171163.15 TPM= 9.21 Transcript Type= NA
chr1	248850006	248859072	248850006	248859072	-	ENST00000306601.8@ZNF692	ENST00000306601.8	protein_coding	248858918,248858131,248857828,248857234,248856514,248856288,248855725,248855558,248855380,248853937,248850682,248850006	248859072,248858321,248857859,248857497,248856562,248856422,248855946,248855635,248855458,248854051,248850781,248850516	Gene ID= ENSG00000171163.15 TPM= 4.96 Transcript Type= protein_coding
chr1	248906243	248918573	248906243	248918573	+	ENST00000329291.5@PGBD2	ENST00000329291.5	protein_coding	248906243,248913816,248916602	248906342,248913879,248918573	Gene ID= ENSG00000185220.11 TPM= 1.06 Transcript Type= protein_coding
chr2	264872	278283	264872	278283	+	ENST00000272065.9@ACP1	ENST00000272065.9	protein_coding	264872,271866,272037,275140,276980,277227	265007,271939,272150,275201,277085,278283	Gene ID= ENSG00000143727.15 TPM= 101.97 Transcript Type= protein_coding
chr2	264869	278283	264869	278283	+	ENST00000272067.10@ACP1	ENST00000272067.10	protein_coding	264869,271866,272192,275140,276980,277227	265007,271939,272305,275201,277085,278283	Gene ID= ENSG00000143727.15 TPM= 18.06 Transcript Type= protein_coding
chr2	279558	288296	279558	288296	-	ENST00000403610.8@ALKAL2	ENST00000403610.8	protein_coding	288013,287583,286290,286123,283111,279558	288296,287892,286343,286203,283175,280152	Gene ID= ENSG00000189292.15 TPM= 4.25 Transcript Type= protein_coding
chr2	667335	677439	667335	677439	-	ENST00000281017.7@TMEM18	ENST00000281017.7	protein_coding	677289,675510,672808,669757,667335	677439,675630,672862,669850,669675	Gene ID= ENSG00000151353.14 TPM= 1.06 Transcript Type= protein_coding
chr2	678120	678921	678120	678921	-	transcript32.chr2.nnic@NA	transcript32.chr2.nnic	NA	678120	678921	Gene ID= novel_gene_chr2_33 TPM= 2.12 Transcript Type= NA
chr2	1413480	1542727	1413480	1542727	+	ENST00000382201.7@TPO	ENST00000382201.7	protein_coding	1413480,1414408,1423045,1433438,1436252,1453694,1456076,1477086,1484596,1493802,1495989,1496595,1503948,1516883,1540594,1542421	1413550,1414502,1423129,1433607,1436384,1453823,1456282,1477604,1484854,1494039,1496197,1496765,1504079,1516982,1540723,1542727	Gene ID= ENSG00000115705.20 TPM= 1.06 Transcript Type= protein_coding
chr2	1631887	1744506	1631887	1744506	-	ENST00000252804.8@PXDN	ENST00000252804.8	protein_coding	1744256,1693063,1691928,1687632,1684080,1683656,1680193,1676927,1673643,1666214,1664958,1663605,1662072,1660881,1654400,1653628,1648172,1644618,1643368,1639302,1638846,1635408,1631887	1744506,1693134,1691999,1687703,1684151,1683727,1680362,1677044,1673812,1666486,1665074,1663763,1662184,1661037,1654508,1653785,1649675,1644752,1643576,1639422,1638978,1635521,1634323	Gene ID= ENSG00000130508.10 TPM= 14.87 Transcript Type= protein_coding
chr2	3188925	3377882	3188925	3377882	-	ENST00000382125.8@EIPR1	ENST00000382125.8	protein_coding	3377648,3354550,3338017,3257299,3214149,3196881,3193999,3192414,3188925	3377882,3354633,3338149,3257455,3214248,3197017,3194166,3192581,3189508	Gene ID= ENSG00000032389.12 TPM= 25.49 Transcript Type= protein_coding
chr2	3379686	3479566	3379686	3479566	+	ENST00000324266.9@TRAPPC12	ENST00000324266.9	protein_coding	3379686,3387620,3401777,3421881,3424525,3443779,3457621,3460263,3465597,3477695,3478846,3479219	3379876,3388670,3401893,3421994,3424663,3443891,3457693,3460336,3465695,3477795,3478933,3479566	Gene ID= ENSG00000171853.15 TPM= 31.86 Transcript Type= protein_coding
chr2	3379675	3479567	3379675	3479567	+	ENST00000382110.6@TRAPPC12	ENST00000382110.6	protein_coding	3379675,3387620,3401777,3421881,3424525,3443779,3457621,3460263,3465597,3477695,3478846,3479219	3379839,3388670,3401893,3421994,3424663,3443891,3457693,3460336,3465695,3477795,3478933,3479567	Gene ID= ENSG00000171853.15 TPM= 9.56 Transcript Type= protein_coding
chr2	3379683	3479565	3379683	3479565	+	transcript46.chr2.nnic@TRAPPC12	transcript46.chr2.nnic	protein_coding	3379683,3387620,3401777,3424525,3443779,3457621,3460263,3465597,3477695,3478846,3479219	3379876,3388670,3401893,3424663,3443891,3457693,3460336,3465695,3477795,3478933,3479565	Gene ID= ENSG00000171853.15 TPM= 2.12 Transcript Type= NA
chr2	3472421	3479567	3472421	3479567	+	ENST00000469400.1@TRAPPC12	ENST00000469400.1	protein_coding	3472421,3477695,3478846,3479219	3472602,3477795,3478933,3479567	Gene ID= ENSG00000171853.15 TPM= 3.19 Transcript Type= processed_transcript
chr2	3482422	3485087	3482422	3485087	+	transcript55.chr2.nnic@NA	transcript55.chr2.nnic	NA	3482422	3485087	Gene ID= novel_gene_chr2_56 TPM= 2.12 Transcript Type= NA
chr2	3497361	3519736	3497361	3519736	-	ENST00000327435.10@ADI1	ENST00000327435.10	protein_coding	3519368,3513857,3500814,3497361	3519736,3513976,3500993,3499082	Gene ID= ENSG00000182551.13 TPM= 132.77 Transcript Type= protein_coding
chr2	3545115	3558616	3545115	3558616	-	ENST00000315212.3@RNASEH1	ENST00000315212.3	protein_coding	3558133,3556789,3552144,3550373,3549058,3548640,3547931,3545115	3558616,3556904,3552308,3550472,3549112,3548724,3548055,3545871	Gene ID= ENSG00000171865.9 TPM= 42.49 Transcript Type= protein_coding
chr2	3558455	3561689	3558455	3561689	+	transcript79.chr2.nnic@RNASEH1-AS1	transcript79.chr2.nnic	antisense_RNA	3558455,3559404,3561317	3558998,3559729,3561689	Gene ID= ENSG00000234171.2 TPM= 4.25 Transcript Type= NA
chr2	3575205	3580919	3575205	3580919	+	ENST00000304921.9@RPS7	ENST00000304921.9	protein_coding	3575205,3575592,3575817,3576487,3577710,3580110,3580805	3575350,3575684,3575888,3576630,3577774,3580260,3580919	Gene ID= ENSG00000171863.12 TPM= 189.06 Transcript Type= protein_coding
chr2	3594832	3644644	3594832	3644644	+	ENST00000382062.6@COLEC11	ENST00000382062.6	protein_coding	3594832,3604315,3613311,3640278,3643444,3643727	3595168,3604470,3613382,3640331,3643539,3644644	Gene ID= ENSG00000118004.17 TPM= 2.12 Transcript Type= protein_coding
chr2	3595092	3644458	3595092	3644458	+	ENST00000349077.8@COLEC11	ENST00000349077.8	protein_coding	3595092,3604315,3613311,3637533,3640278,3643444,3643727	3595168,3604470,3613382,3637604,3640331,3643539,3644458	Gene ID= ENSG00000118004.17 TPM= 2.12 Transcript Type= protein_coding
chr2	5692663	5694286	5692663	5694286	+	transcript88.chr2.nnic@NA	transcript88.chr2.nnic	NA	5692663	5694286	Gene ID= novel_gene_chr2_89 TPM= 2.12 Transcript Type= NA
chr2	6729168	6770311	6729168	6770311	-	ENST00000382045.3@LINC00487	ENST00000382045.3	lincRNA	6770079,6736623,6732696,6731155,6730649,6729168	6770311,6736715,6732804,6732260,6730743,6729662	Gene ID= ENSG00000205837.7 TPM= 1.06 Transcript Type= lincRNA
chr2	6848316	6865696	6848316	6865696	-	ENST00000256722.9@CMPK2	ENST00000256722.9	protein_coding	6865022,6863464,6861184,6851450,6848316	6865696,6863578,6861385,6851683,6849973	Gene ID= ENSG00000134326.11 TPM= 10.62 Transcript Type= protein_coding
chr2	6865897	6898014	6865897	6898014	+	transcript95.chr2.nic@RSAD2	transcript95.chr2.nic	protein_coding	6865897,6876716,6883371,6886935,6890176,6893671,6895778	6866045,6878146,6883532,6887164,6890325,6893703,6898014	Gene ID= ENSG00000134321.11 TPM= 3.19 Transcript Type= NA
chr2	6917392	7044182	6917392	7044182	+	ENST00000320892.10@RNF144A	ENST00000320892.10	protein_coding	6917392,6940948,6996916,7014454,7014712,7020473,7024369,7030126,7039629	6917622,6941147,6997061,7014558,7014772,7020680,7024516,7030215,7044182	Gene ID= ENSG00000151692.14 TPM= 8.5 Transcript Type= protein_coding
chr2	8679817	8681871	8679817	8681871	-	transcript104.chr2.nnic@ID2-AS1	transcript104.chr2.nnic	antisense_RNA	8681827,8679817	8681871,8680587	Gene ID= ENSG00000235092.5 TPM= 2.12 Transcript Type= NA
chr2	8680072	8681871	8680072	8681871	-	transcript105.chr2.nnic@ID2-AS1	transcript105.chr2.nnic	antisense_RNA	8681827,8680072	8681871,8680587	Gene ID= ENSG00000235092.5 TPM= 3.19 Transcript Type= NA
chr2	8678845	8684453	8678845	8684453	+	ENST00000234091.8@ID2	ENST00000234091.8	protein_coding	8678845,8681491,8681854,8682843,8683685	8679317,8681565,8682513,8682906,8684453	Gene ID= ENSG00000115738.9 TPM= 14.87 Transcript Type= protein_coding
chr2	8746464	8837647	8746464	8837647	-	transcript109.chr2.nic@KIDINS220	transcript109.chr2.nic	protein_coding	8837480,8826986,8818695,8817618,8813237,8812395,8806271,8802930,8800400,8798202,8796771,8793810,8791060,8789880,8788647,8786206,8785741,8779674,8778896,8778639,8776748,8770670,8751466,8750112,8747887,8746464	8837647,8827129,8818793,8817716,8813335,8812493,8806369,8803127,8800498,8798300,8796869,8793987,8791224,8790059,8788812,8786357,8786030,8779814,8779139,8778727,8776892,8770832,8751644,8750335,8748000,8747201	Gene ID= ENSG00000134313.15 TPM= 4.25 Transcript Type= NA
chr2	8728857	8837625	8728857	8837625	-	ENST00000256707.7@KIDINS220	ENST00000256707.7	protein_coding	8837480,8826986,8818695,8817618,8813237,8812395,8806271,8802930,8800400,8798202,8796771,8793810,8791060,8789880,8788647,8786206,8785741,8779674,8778896,8778639,8776748,8770670,8751466,8750112,8747887,8747145,8736868,8734655,8733444,8728857	8837625,8827129,8818793,8817716,8813335,8812493,8806369,8803127,8800498,8798300,8796869,8793987,8791224,8790059,8788812,8786357,8786030,8779814,8779139,8778727,8776892,8770832,8751644,8750335,8748000,8747201,8736999,8734753,8733680,8731982	Gene ID= ENSG00000134313.15 TPM= 20.18 Transcript Type= protein_coding
chr2	8821807	8825388	8821807	8825388	+	transcript124.chr2.nnic@NA	transcript124.chr2.nnic	NA	8821807	8825388	Gene ID= novel_gene_chr2_125 TPM= 6.37 Transcript Type= NA
chr2	8858120	9003836	8858120	9003836	-	transcript128.chr2.nnic@MBOAT2	transcript128.chr2.nnic	protein_coding	9003540,8974359,8958497,8943187,8908621,8888018,8882511,8877030,8873108,8868446,8864170,8862590,8860613,8858120	9003836,8974435,8958642,8943264,8908716,8888073,8882565,8877213,8873300,8868549,8864234,8862722,8860764,8858904	Gene ID= ENSG00000143797.11 TPM= 4.4 Transcript Type= NA
chr2	8858120	9003861	8858120	9003861	-	transcript132.chr2.nic@MBOAT2	transcript132.chr2.nic	protein_coding	9003540,8958497,8943187,8908621,8888018,8882511,8877030,8873108,8868446,8864170,8862271,8860613,8858120	9003861,8958642,8943264,8908716,8888073,8882565,8877213,8873300,8868549,8864234,8862322,8860764,8858904	Gene ID= ENSG00000143797.11 TPM= 4.93 Transcript Type= NA
chr2	8858120	9003860	8858120	9003860	-	transcript138.chr2.nnic@MBOAT2	transcript138.chr2.nnic	protein_coding	9003540,8943187,8908621,8888018,8882511,8877030,8873108,8868446,8864170,8862590,8860613,8858120	9003860,8943264,8908716,8888073,8882565,8877213,8873300,8868549,8864234,8862722,8860764,8858904	Gene ID= ENSG00000143797.11 TPM= 3.34 Transcript Type= NA
chr2	8858120	9003950	8858120	9003950	-	transcript139.chr2.nnic@MBOAT2	transcript139.chr2.nnic	protein_coding	9003540,8958497,8943187,8908621,8888018,8882511,8877030,8873108,8868446,8864170,8860613,8858120	9003950,8958642,8943264,8908716,8888073,8882565,8877213,8873300,8868549,8864234,8860764,8858904	Gene ID= ENSG00000143797.11 TPM= 3.34 Transcript Type= NA
chr2	8858120	9003842	8858120	9003842	-	transcript142.chr2.nic@MBOAT2	transcript142.chr2.nic	protein_coding	9003540,8908621,8888018,8882511,8877030,8873108,8868446,8864170,8862590,8860613,8858120	9003842,8908716,8888073,8882565,8877213,8873300,8868549,8864234,8862722,8860764,8858904	Gene ID= ENSG00000143797.11 TPM= 5.46 Transcript Type= NA
chr2	8858120	9003874	8858120	9003874	-	transcript144.chr2.nnic@MBOAT2	transcript144.chr2.nnic	protein_coding	9003540,8888018,8882511,8877030,8873108,8868446,8864170,8862271,8860613,8858120	9003874,8888073,8882565,8877213,8873300,8868549,8864234,8862322,8860764,8858904	Gene ID= ENSG00000143797.11 TPM= 2.8 Transcript Type= NA
chr2	8858120	9003874	8858120	9003874	-	transcript145.chr2.nnic@MBOAT2	transcript145.chr2.nnic	protein_coding	9003540,8888018,8882511,8877030,8873108,8868446,8864170,8862590,8860613,8858120	9003874,8888073,8882565,8877213,8873300,8868549,8864234,8862722,8860764,8858904	Gene ID= ENSG00000143797.11 TPM= 2.27 Transcript Type= NA
chr2	9206831	9357189	9206831	9357189	+	transcript153.chr2.nic@ASAP2	transcript153.chr2.nic	protein_coding	9206831,9279317,9297300,9318524,9320288,9323121,9327826,9334738,9335093,9336036,9344532,9344731,9350808,9356047,9356179	9207230,9279389,9297445,9318598,9320337,9323250,9327911,9334813,9335179,9336044,9344635,9344800,9350895,9356095,9357189	Gene ID= ENSG00000151693.10 TPM= 2.12 Transcript Type= NA
chr2	9206765	9405683	9206765	9405683	+	ENST00000315273.4@ASAP2	ENST00000315273.4	protein_coding	9206765,9279317,9297300,9318524,9320288,9323121,9327826,9334738,9335093,9344532,9344731,9350808,9356047,9356179,9358756,9368425,9374755,9376908,9378944,9380741,9385245,9388294,9393482,9400023,9400742,9401274,9403253	9207230,9279389,9297445,9318598,9320337,9323250,9327911,9334813,9335179,9344635,9344800,9350895,9356095,9356345,9358889,9368519,9374944,9376993,9379059,9380808,9385358,9388546,9393647,9400072,9400830,9401396,9405683	Gene ID= ENSG00000151693.10 TPM= 4.25 Transcript Type= protein_coding
chr2	9405668	9423506	9405668	9423506	-	transcript158.chr2.nnic@ITGB1BP1	transcript158.chr2.nnic	protein_coding	9423373,9418626,9414178,9412269,9408113,9407449,9406298,9405668	9423506,9418732,9414256,9412405,9408205,9407598,9406905,9406021	Gene ID= ENSG00000119185.12 TPM= 7.44 Transcript Type= NA
chr2	9403475	9423229	9403475	9423229	-	ENST00000360635.7@ITGB1BP1	ENST00000360635.7	protein_coding	9422479,9419990,9418626,9414178,9412269,9408113,9407449,9403475	9423229,9420100,9418732,9414256,9412405,9408205,9407598,9406905	Gene ID= ENSG00000119185.12 TPM= 23.37 Transcript Type= protein_coding
chr2	9406660	9423231	9406660	9423231	-	transcript167.chr2.nic@ITGB1BP1	transcript167.chr2.nic	protein_coding	9422479,9418626,9414178,9412269,9408113,9407449,9406660	9423231,9418732,9414256,9412405,9408205,9407598,9406905	Gene ID= ENSG00000119185.12 TPM= 31.2 Transcript Type= NA
chr2	9406660	9423543	9406660	9423543	-	transcript171.chr2.nic@ITGB1BP1	transcript171.chr2.nic	protein_coding	9423373,9414178,9412269,9408113,9407449,9406660	9423543,9414256,9412405,9408205,9407598,9406905	Gene ID= ENSG00000119185.12 TPM= 10.22 Transcript Type= NA
chr2	9405684	9423547	9405684	9423547	-	ENST00000355346.8@ITGB1BP1	ENST00000355346.8	protein_coding	9423373,9418626,9414178,9412269,9408113,9407449,9405684	9423547,9418732,9414256,9412405,9408205,9407598,9406905	Gene ID= ENSG00000119185.12 TPM= 1.06 Transcript Type= protein_coding
chr2	9405684	9423506	9405684	9423506	-	ENST00000238091.8@ITGB1BP1	ENST00000238091.8	protein_coding	9423373,9418626,9414178,9412269,9408113,9405684	9423506,9418732,9414256,9412405,9408205,9406905	Gene ID= ENSG00000119185.12 TPM= 1.06 Transcript Type= protein_coding
chr2	9406660	9423500	9406660	9423500	-	ENST00000464228.5@ITGB1BP1	ENST00000464228.5	protein_coding	9423373,9418626,9412269,9408113,9407449,9406660	9423500,9418732,9412405,9408205,9407598,9406905	Gene ID= ENSG00000119185.12 TPM= 6.82 Transcript Type= nonsense_mediated_decay
chr2	9420378	9421702	9420378	9421702	+	transcript178.chr2.nnic@NA	transcript178.chr2.nnic	NA	9420378	9421702	Gene ID= novel_gene_chr2_179 TPM= 3.19 Transcript Type= NA
chr2	9420770	9423519	9420770	9423519	-	transcript180.chr2.nnic@NA	transcript180.chr2.nnic	NA	9420770	9423519	Gene ID= novel_gene_chr2_181 TPM= 2.12 Transcript Type= NA
chr2	9456977	9473098	9456977	9473098	+	ENST00000489403.1@CPSF3	ENST00000489403.1	protein_coding	9456977,9459531,9467707,9471343,9472916	9457027,9459618,9467975,9471439,9473098	Gene ID= ENSG00000119203.13 TPM= 3.19 Transcript Type= processed_transcript
chr2	9423568	9473101	9423568	9473101	+	ENST00000238112.7@CPSF3	ENST00000238112.7	protein_coding	9423568,9428765,9429923,9430752,9432511,9433871,9436211,9440491,9441818,9443515,9448198,9452913,9455659,9456933,9459531,9467707,9471343,9472916	9423823,9428828,9430020,9430880,9432688,9433960,9436361,9440666,9441976,9443661,9448350,9453021,9455757,9457027,9459618,9467776,9471439,9473101	Gene ID= ENSG00000119203.13 TPM= 39.3 Transcript Type= protein_coding
chr2	9474541	9486679	9474541	9486679	+	transcript197.chr2.nic@IAH1	transcript197.chr2.nic	protein_coding	9474541,9475987,9478222,9481286,9484432	9474647,9476039,9478370,9481447,9486679	Gene ID= ENSG00000134330.18 TPM= 4.25 Transcript Type= NA
chr2	9474578	9488462	9474578	9488462	+	ENST00000351760.11@IAH1	ENST00000351760.11	protein_coding	9474578,9475987,9478254,9481286,9484432,9488147	9474647,9476039,9478370,9481447,9484550,9488462	Gene ID= ENSG00000134330.18 TPM= 6.37 Transcript Type= nonsense_mediated_decay
chr2	9496607	9500540	9496607	9500540	+	transcript205.chr2.nnic@NA	transcript205.chr2.nnic	NA	9496607	9500540	Gene ID= novel_gene_chr2_206 TPM= 3.19 Transcript Type= NA
chr2	9555899	9556775	9555899	9556775	+	ENST00000607241.1@AC073195.1	ENST00000607241.1	lincRNA	9555899	9556775	Gene ID= ENSG00000271855.1 TPM= 1.06 Transcript Type= lincRNA
chr2	9584267	9630970	9584267	9630970	-	transcript213.chr2.nic@YWHAQ	transcript213.chr2.nic	protein_coding	9630813,9630159,9591392,9588165,9587414,9584267	9630970,9630534,9591515,9588328,9587509,9585345	Gene ID= ENSG00000134308.13 TPM= 16.28 Transcript Type= NA
chr2	9583972	9631014	9583972	9631014	-	ENST00000238081.7@YWHAQ	ENST00000238081.7	protein_coding	9630941,9630159,9591392,9588165,9587414,9583972	9631014,9630534,9591515,9588328,9587509,9585345	Gene ID= ENSG00000134308.13 TPM= 316.34 Transcript Type= protein_coding
chr2	9583972	9630616	9583972	9630616	-	ENST00000381844.8@YWHAQ	ENST00000381844.8	protein_coding	9630159,9591392,9588165,9587414,9583972	9630616,9591515,9588328,9587509,9585345	Gene ID= ENSG00000134308.13 TPM= 42.31 Transcript Type= protein_coding
chr2	9843354	9934416	9843354	9934416	+	ENST00000263663.9@TAF1B	ENST00000263663.9	protein_coding	9843354,9845220,9849373,9851541,9854326,9868276,9875865,9882706,9904859,9910736,9911511,9913159,9919041,9919598,9933783	9843559,9845318,9849460,9851638,9854421,9868429,9876018,9882805,9905006,9910913,9911557,9913249,9919111,9919820,9934416	Gene ID= ENSG00000115750.16 TPM= 4.25 Transcript Type= protein_coding
chr2	9951648	10002277	9951648	10002277	+	transcript234.chr2.nic@GRHL1	transcript234.chr2.nic	protein_coding	9951648,9954915,9958786,9961046,9963886,9964235,9965287,9986124,9990696,9992007,9993207,9995879,9996316,9998965,10000593	9951853,9955101,9958856,9961436,9964042,9964346,9965381,9986282,9990747,9992146,9993244,9995970,9996401,9999029,10002277	Gene ID= ENSG00000134317.17 TPM= 3.19 Transcript Type= NA
chr2	10039098	10043350	10039098	10043350	-	transcript238.chr2.nnic@AC104794.2	transcript238.chr2.nnic	lincRNA	10043310,10042633,10039098	10043350,10043004,10040664	Gene ID= ENSG00000260077.1 TPM= 2.12 Transcript Type= NA
chr2	10044245	10054836	10044245	10054836	+	ENST00000535335.1@KLF11	ENST00000535335.1	protein_coding	10044245,10046150,10047650,10052227	10044451,10046419,10048595,10054836	Gene ID= ENSG00000172059.10 TPM= 10.09 Transcript Type= protein_coding
chr2	10043555	10054836	10043555	10054836	+	ENST00000305883.5@KLF11	ENST00000305883.5	protein_coding	10043555,10046150,10047650,10052227	10043758,10046419,10048595,10054836	Gene ID= ENSG00000172059.10 TPM= 34.52 Transcript Type= protein_coding
chr2	10056780	10080411	10056780	10080411	-	ENST00000381813.4@CYS1	ENST00000381813.4	protein_coding	10079906,10065904,10056780	10080411,10065956,10058958	Gene ID= ENSG00000205795.4 TPM= 5.31 Transcript Type= protein_coding
chr2	10302874	10427609	10302874	10427609	+	transcript245.chr2.nic@HPCAL1	transcript245.chr2.nic	protein_coding	10302874,10396835,10408562,10419734,10422983,10426724	10303177,10396920,10408734,10420135,10423088,10427609	Gene ID= ENSG00000115756.12 TPM= 3.19 Transcript Type= NA
chr2	10302904	10427609	10302904	10427609	+	transcript247.chr2.nnic@HPCAL1	transcript247.chr2.nnic	protein_coding	10302904,10387761,10396835,10419734,10422983,10426724	10303177,10387810,10396920,10420135,10423088,10427609	Gene ID= ENSG00000115756.12 TPM= 3.19 Transcript Type= NA
chr2	10302907	10427609	10302907	10427609	+	ENST00000307845.7@HPCAL1	ENST00000307845.7	protein_coding	10302907,10396835,10419734,10422983,10426724	10303177,10396920,10420135,10423088,10427609	Gene ID= ENSG00000115756.12 TPM= 86.04 Transcript Type= protein_coding
chr2	10423246	10427590	10423246	10427590	+	transcript252.chr2.nnic@NA	transcript252.chr2.nnic	NA	10423246	10427590	Gene ID= novel_gene_chr2_253 TPM= 3.19 Transcript Type= NA
chr2	10440388	10448425	10440388	10448425	-	transcript255.chr2.nic@ODC1	transcript255.chr2.nic	protein_coding	10448121,10445155,10444931,10444474,10444095,10443702,10443490,10443230,10442012,10441817,10441509,10440388	10448425,10445264,10445049,10444547,10444267,10443836,10443571,10443313,10442174,10441929,10441723,10440868	Gene ID= ENSG00000115758.12 TPM= 16.99 Transcript Type= NA
chr2	10440388	10447998	10440388	10447998	-	transcript256.chr2.nic@ODC1	transcript256.chr2.nic	protein_coding	10447628,10445155,10444931,10444474,10444095,10443702,10443490,10443230,10442012,10441817,10441509,10440388	10447998,10445264,10445049,10444647,10444267,10443836,10443571,10443313,10442174,10441929,10441723,10440868	Gene ID= ENSG00000115758.12 TPM= 22.31 Transcript Type= NA
chr2	10571655	10689967	10571655	10689967	-	ENST00000381685.9@NOL10	ENST00000381685.9	protein_coding	10689796,10684567,10681971,10675794,10673520,10671554,10668658,10667218,10662959,10659172,10657742,10654481,10644320,10607185,10603078,10602776,10600853,10589578,10589043,10577636,10571655	10689967,10684612,10682069,10675871,10673557,10671690,10668723,10667278,10663044,10659250,10657891,10654547,10644372,10607311,10603157,10602874,10600942,10589751,10589290,10577738,10572190	Gene ID= ENSG00000115761.15 TPM= 13.81 Transcript Type= protein_coding
chr2	10783393	10812839	10783393	10812839	-	ENST00000540494.5@PDIA6	ENST00000540494.5	protein_coding	10812678,10810243,10802499,10797700,10797081,10793096,10791795,10790719,10789749,10788897,10788697,10787281,10784934,10783393	10812839,10810420,10802640,10797757,10797207,10793202,10791925,10790833,10789889,10788981,10788769,10787439,10785030,10784326	Gene ID= ENSG00000143870.12 TPM= 9.03 Transcript Type= protein_coding
chr2	10783391	10812844	10783391	10812844	-	ENST00000272227.7@PDIA6	ENST00000272227.7	protein_coding	10812678,10802499,10797700,10797081,10793096,10791795,10790719,10789749,10788897,10788697,10787281,10784934,10783391	10812844,10802640,10797757,10797207,10793202,10791925,10790833,10789889,10788981,10788769,10787439,10785030,10784326	Gene ID= ENSG00000143870.12 TPM= 339.36 Transcript Type= protein_coding
chr2	10844370	10885118	10844370	10885118	+	transcript287.chr2.nnic@AC092687.1	transcript287.chr2.nnic	lincRNA	10844370,10844753,10884834	10844505,10844832,10885118	Gene ID= ENSG00000232056.1 TPM= 3.19 Transcript Type= NA
chr2	10867106	10868807	10867106	10868807	-	transcript291.chr2.nnic@NA	transcript291.chr2.nnic	NA	10867106	10868807	Gene ID= novel_gene_chr2_292 TPM= 7.44 Transcript Type= NA
chr2	10876850	10881229	10876850	10881229	-	transcript293.chr2.nnic@NA	transcript293.chr2.nnic	NA	10876850	10881229	Gene ID= novel_gene_chr2_294 TPM= 2.12 Transcript Type= NA
chr2	10882819	10885117	10882819	10885117	+	transcript289.chr2.nnic@NA	transcript289.chr2.nnic	NA	10882819	10885117	Gene ID= novel_gene_chr2_290 TPM= 2.12 Transcript Type= NA
chr2	10898146	10901926	10898146	10901926	+	transcript295.chr2.nnic@NA	transcript295.chr2.nnic	NA	10898146	10901926	Gene ID= novel_gene_chr2_296 TPM= 2.12 Transcript Type= NA
chr2	11155372	11178874	11155372	11178874	+	ENST00000295083.7@PQLC3	ENST00000295083.7	protein_coding	11155372,11160466,11160625,11164204,11171925,11174968,11177737	11155689,11160548,11160694,11164261,11172045,11175009,11178874	Gene ID= ENSG00000162976.12 TPM= 13.81 Transcript Type= protein_coding
chr2	11155372	11178870	11155372	11178870	+	ENST00000441908.6@PQLC3	ENST00000441908.6	protein_coding	11155372,11160466,11160625,11164204,11171925,11177737	11155689,11160548,11160694,11164261,11172045,11178870	Gene ID= ENSG00000162976.12 TPM= 1.06 Transcript Type= protein_coding
chr2	11192113	11344684	11192113	11344684	-	transcript307.chr2.nic@ROCK2	transcript307.chr2.nic	protein_coding	11343996,11287655,11286539,11249661,11235702,11227254,11224322,11222083,11221198,11218966,11218455,11217090,11216158,11215510,11215321,11214840,11214357,11211681,11208287,11207726,11202052,11201310,11200957,11198681,11198491,11197526,11197180,11194955,11194256,11193779,11192451,11192113	11344684,11287736,11286639,11249798,11235962,11227398,11224460,11222174,11221357,11219026,11218466,11217169,11216206,11215645,11215412,11215086,11214463,11211840,11208447,11207910,11202121,11201413,11201143,11198774,11198585,11197705,11197348,11195025,11194344,11193857,11192712,11192361	Gene ID= ENSG00000134318.13 TPM= 2.93 Transcript Type= NA
chr2	11218970	11344672	11218970	11344672	-	transcript327.chr2.nnic@ROCK2	transcript327.chr2.nnic	protein_coding	11343996,11249661,11235702,11227254,11224322,11222083,11221198,11218970	11344672,11249798,11235962,11227398,11224460,11222174,11221357,11219026	Gene ID= ENSG00000134318.13 TPM= 2.12 Transcript Type= NA
chr2	11444375	11466177	11444375	11466177	-	ENST00000542100.5@E2F6	ENST00000542100.5	protein_coding	11465772,11458281,11457179,11455342,11453582,11451651,11450012,11447627,11444375	11466177,11458351,11457233,11455474,11453798,11451806,11450126,11447774,11446523	Gene ID= ENSG00000169016.16 TPM= 1.06 Transcript Type= protein_coding
chr2	11746593	11827409	11746593	11827409	+	transcript342.chr2.nic@LPIN1	transcript342.chr2.nic	protein_coding	11746593,11765533,11767763,11771372,11773620,11776086,11779519,11782201,11783829,11784886,11787074,11788387,11791914,11795408,11802907,11804423,11805070,11815088,11819484,11820411,11824632	11746671,11765733,11767858,11771679,11773745,11776193,11779645,11782507,11783922,11785076,11787167,11788456,11792006,11795487,11803033,11804571,11805156,11815240,11819598,11820514,11827409	Gene ID= ENSG00000134324.11 TPM= 6.72 Transcript Type= NA
chr2	11746588	11827409	11746588	11827409	+	ENST00000256720.6@LPIN1	ENST00000256720.6	protein_coding	11746588,11765533,11767763,11771372,11773620,11779519,11782201,11783829,11784886,11787074,11788387,11791914,11795408,11802907,11804423,11805070,11815088,11819484,11820411,11824632	11746671,11765733,11767858,11771679,11773745,11779645,11782507,11783922,11785076,11787167,11788456,11792006,11795487,11803033,11804571,11805156,11815240,11819598,11820514,11827409	Gene ID= ENSG00000134324.11 TPM= 5.31 Transcript Type= protein_coding
chr2	11746593	11784313	11746593	11784313	+	transcript347.chr2.nic@LPIN1	transcript347.chr2.nic	protein_coding	11746593,11765533,11767763,11771372,11773620,11776086,11779519,11782201,11783829	11746671,11765733,11767858,11771679,11773745,11776193,11779645,11782507,11784313	Gene ID= ENSG00000134324.11 TPM= 2.12 Transcript Type= NA
chr2	11746593	11774981	11746593	11774981	+	transcript348.chr2.nic@LPIN1	transcript348.chr2.nic	protein_coding	11746593,11765533,11767763,11771372,11773620	11746671,11765733,11767858,11771679,11774981	Gene ID= ENSG00000134324.11 TPM= 2.12 Transcript Type= NA
chr2	12716889	12742734	12716889	12742734	+	ENST00000155926.8@TRIB2	ENST00000155926.8	protein_coding	12716889,12723260,12740326	12718577,12723552,12742734	Gene ID= ENSG00000071575.11 TPM= 71.16 Transcript Type= protein_coding
chr2	12718238	12724825	12718238	12724825	+	ENST00000405331.3@TRIB2	ENST00000405331.3	protein_coding	12718238,12723260,12724629	12718577,12723552,12724825	Gene ID= ENSG00000071575.11 TPM= 13.81 Transcript Type= protein_coding
chr2	12718274	12723292	12718274	12723292	-	transcript357.chr2.nnic@NA	transcript357.chr2.nnic	NA	12718274	12723292	Gene ID= novel_gene_chr2_358 TPM= 3.19 Transcript Type= NA
chr2	15166909	15561330	15166909	15561330	-	ENST00000281513.9@NBAS	ENST00000281513.9	protein_coding	15561188,15558580,15556783,15554061,15553426,15551493,15539223,15536418,15534543,15511212,15504145,15488894,15478226,15475687,15474067,15473222,15468382,15467664,15467329,15461687,15461201,15427711,15424315,15417527,15415546,15402168,15396413,15394227,15383215,15379602,15374608,15366580,15356303,15353553,15351992,15330598,15328199,15327750,15309171,15308216,15292537,15287073,15276851,15275484,15238468,15234545,15232422,15218773,15190264,15186742,15178988,15166909	15561330,15558634,15556819,15554138,15553473,15551536,15539356,15536551,15534641,15511350,15504213,15489022,15478289,15475880,15474324,15473347,15468533,15467804,15467407,15461791,15461337,15427794,15424468,15417712,15415719,15402301,15396475,15394349,15383317,15379831,15374720,15366693,15356416,15353710,15352081,15330765,15328312,15327870,15309247,15308353,15292766,15287183,15277101,15275818,15238686,15234747,15232511,15218968,15190403,15186880,15179116,15167323	Gene ID= ENSG00000151779.12 TPM= 8.5 Transcript Type= protein_coding
chr2	15591865	15597440	15591865	15597440	+	transcript382.chr2.nic@DDX1	transcript382.chr2.nic	protein_coding	15591865,15595145,15595490,15596734,15597375	15591949,15595196,15595553,15596763,15597440	Gene ID= ENSG00000079785.14 TPM= 8.5 Transcript Type= NA
chr2	15608665	15611376	15608665	15611376	-	transcript384.chr2.nnic@NA	transcript384.chr2.nnic	NA	15608665	15611376	Gene ID= novel_gene_chr2_385 TPM= 15.93 Transcript Type= NA
chr2	17539067	17656183	17539067	17656183	+	transcript387.chr2.nnic@VSNL1	transcript387.chr2.nnic	protein_coding	17539067,17592070,17649410,17655197	17539403,17592236,17649625,17656183	Gene ID= ENSG00000163032.11 TPM= 4.78 Transcript Type= NA
chr2	17540653	17656439	17540653	17656439	+	ENST00000295156.8@VSNL1	ENST00000295156.8	protein_coding	17540653,17592070,17649410,17655197	17540918,17592236,17649625,17656439	Gene ID= ENSG00000163032.11 TPM= 18.59 Transcript Type= protein_coding
chr2	17552162	17556467	17552162	17556467	-	transcript397.chr2.nnic@NA	transcript397.chr2.nnic	NA	17552162	17556467	Gene ID= novel_gene_chr2_398 TPM= 2.12 Transcript Type= NA
chr2	17663812	17753803	17663812	17753803	-	ENST00000448223.6@SMC6	ENST00000448223.6	protein_coding	17753626,17752978,17745827,17741612,17738221,17731741,17731078,17726389,17725257,17721142,17720940,17718077,17717088,17716741,17716086,17714861,17708639,17707219,17703157,17701829,17700208,17696289,17695152,17683638,17678859,17670423,17666420,17663812	17753803,17753064,17745951,17741729,17738326,17731877,17731139,17726469,17725358,17721261,17721038,17718223,17717176,17716905,17716264,17715065,17708753,17707379,17703292,17701909,17700378,17696426,17695297,17683763,17678964,17670575,17666517,17665613	Gene ID= ENSG00000163029.15 TPM= 1.06 Transcript Type= protein_coding
chr2	17663812	17753830	17663812	17753830	-	ENST00000351948.8@SMC6	ENST00000351948.8	protein_coding	17753626,17745827,17741612,17738221,17731741,17731078,17726389,17725257,17721142,17720940,17718077,17717088,17716741,17716086,17714861,17708639,17707219,17703157,17701829,17700208,17696289,17695152,17683638,17678859,17670423,17666420,17663812	17753830,17745951,17741729,17738326,17731877,17731139,17726469,17725358,17721261,17721038,17718223,17717176,17716905,17716264,17715065,17708753,17707379,17703292,17701909,17700378,17696426,17695297,17683763,17678964,17670575,17666517,17665613	Gene ID= ENSG00000163029.15 TPM= 4.25 Transcript Type= protein_coding
chr2	17753858	17788941	17753858	17788941	+	ENST00000317402.11@GEN1	ENST00000317402.11	protein_coding	17753858,17759929,17761396,17764897,17766579,17768738,17771196,17772634,17773096,17773219,17774271,17778002,17779978,17780621	17753967,17760104,17761582,17765073,17766689,17768811,17771287,17772784,17773132,17773299,17774401,17778063,17780121,17788941	Gene ID= ENSG00000178295.14 TPM= 1.06 Transcript Type= protein_coding
chr2	17754147	17785365	17754147	17785365	+	ENST00000381254.6@GEN1	ENST00000381254.6	protein_coding	17754147,17759929,17761396,17764897,17766579,17768738,17771196,17772634,17773096,17773219,17774271,17778002,17779978,17780621	17754345,17760104,17761582,17765073,17766689,17768811,17771287,17772784,17773132,17773299,17774401,17778063,17780121,17785365	Gene ID= ENSG00000178295.14 TPM= 1.06 Transcript Type= protein_coding
chr2	17753895	17755758	17753895	17755758	+	ENST00000614478.1@GEN1	ENST00000614478.1	protein_coding	17753895	17755758	Gene ID= ENSG00000178295.14 TPM= 2.12 Transcript Type= processed_transcript
chr2	17878678	17932961	17878678	17932961	+	ENST00000304101.8@KCNS3	ENST00000304101.8	protein_coding	17878678,17917680,17930950	17878806,17917871,17932961	Gene ID= ENSG00000170745.11 TPM= 4.25 Transcript Type= protein_coding
chr2	18554723	18560680	18554723	18560680	-	ENST00000381249.3@RDH14	ENST00000381249.3	protein_coding	18560180,18554723	18560680,18555808	Gene ID= ENSG00000240857.1 TPM= 116.84 Transcript Type= protein_coding
chr2	18586474	18589679	18586474	18589679	+	transcript428.chr2.nnic@NA	transcript428.chr2.nnic	NA	18586474	18589679	Gene ID= novel_gene_chr2_429 TPM= 2.12 Transcript Type= NA
chr2	18745504	18747978	18745504	18747978	-	transcript432.chr2.nnic@NA	transcript432.chr2.nnic	NA	18745504	18747978	Gene ID= novel_gene_chr2_433 TPM= 2.12 Transcript Type= NA
chr2	19351485	19358653	19351485	19358653	-	ENST00000272223.2@OSR1	ENST00000272223.2	protein_coding	19358341,19353141,19351485	19358653,19353837,19352410	Gene ID= ENSG00000143867.6 TPM= 6.37 Transcript Type= protein_coding
chr2	19896753	19901679	19896753	19901679	-	transcript438.chr2.nnic@TTC32	transcript438.chr2.nnic	protein_coding	19901476,19897869,19896753	19901679,19898035,19897126	Gene ID= ENSG00000183891.5 TPM= 3.19 Transcript Type= NA
chr2	19896753	19901986	19896753	19901986	-	ENST00000333610.3@TTC32	ENST00000333610.3	protein_coding	19901706,19897869,19896753	19901986,19898035,19897126	Gene ID= ENSG00000183891.5 TPM= 1.06 Transcript Type= protein_coding
chr2	19896750	19901959	19896750	19901959	-	transcript440.chr2.nnic@NA	transcript440.chr2.nnic	NA	19896750	19901959	Gene ID= novel_gene_chr2_441 TPM= 2.12 Transcript Type= NA
chr2	20032650	20052028	20032650	20052028	-	ENST00000175091.4@LAPTM4A	ENST00000175091.4	protein_coding	20051410,20040891,20037538,20037316,20034967,20034317,20032650	20052028,20041011,20037614,20037438,20035062,20034415,20033279	Gene ID= ENSG00000068697.6 TPM= 284.66 Transcript Type= protein_coding
chr2	20052134	20054496	20052134	20054496	+	ENST00000452342.2@AC098828.2	ENST00000452342.2	lincRNA	20052134,20054285	20052494,20054496	Gene ID= ENSG00000223734.2 TPM= 1.06 Transcript Type= lincRNA
chr2	20270498	20274972	20270498	20274972	+	transcript448.chr2.nnic@NA	transcript448.chr2.nnic	NA	20270498	20274972	Gene ID= novel_gene_chr2_449 TPM= 15.93 Transcript Type= NA
chr2	20447074	20449445	20447074	20449445	+	ENST00000272233.5@RHOB	ENST00000272233.5	protein_coding	20447074	20449445	Gene ID= ENSG00000143878.9 TPM= 95.59 Transcript Type= protein_coding
chr2	20622188	20651148	20622188	20651148	-	transcript454.chr2.nic@HS1BP3	transcript454.chr2.nic	protein_coding	20651032,20645340,20640973,20638436,20624732,20622188	20651148,20645505,20641180,20638652,20624892,20624031	Gene ID= ENSG00000118960.12 TPM= 2.12 Transcript Type= NA
chr2	20617822	20651089	20617822	20651089	-	ENST00000304031.7@HS1BP3	ENST00000304031.7	protein_coding	20651032,20645340,20640973,20638436,20624732,20623896,20617822	20651089,20645505,20641180,20638652,20624892,20624031,20619245	Gene ID= ENSG00000118960.12 TPM= 12.75 Transcript Type= protein_coding
chr2	20637428	20639531	20637428	20639531	+	transcript456.chr2.nnic@NA	transcript456.chr2.nnic	NA	20637428	20639531	Gene ID= novel_gene_chr2_457 TPM= 3.19 Transcript Type= NA
chr2	20684391	20823095	20684391	20823095	-	transcript458.chr2.nnic@LDAH	transcript458.chr2.nnic	protein_coding	20823037,20801310,20790255,20774810,20739971,20701570,20686838,20685547,20684391	20823095,20801465,20790398,20774979,20740205,20701652,20687094,20685657,20684923	Gene ID= ENSG00000118961.14 TPM= 2.12 Transcript Type= NA
chr2	21001429	21044073	21001429	21044073	-	ENST00000233242.5@APOB	ENST00000233242.5	protein_coding	21043864,21043513,21042361,21040938,21037958,21037100,21035584,21034816,21033299,21032354,21029898,21029639,21028327,21027828,21026788,21024933,21023525,21022831,21019723,21018992,21016439,21015370,21015073,21014448,21013160,21005080,21004561,21004269,21001429	21044073,21043551,21042476,21041083,21038111,21037255,21035708,21034901,21033518,21032581,21030015,21029785,21028538,21028065,21026964,21025124,21023692,21023042,21019905,21019113,21016649,21015545,21015260,21014593,21013533,21012651,21004675,21004452,21003334	Gene ID= ENSG00000084674.14 TPM= 1.06 Transcript Type= protein_coding
chr2	23645111	23649280	23645111	23649280	-	transcript466.chr2.nnic@NA	transcript466.chr2.nnic	NA	23645111	23649280	Gene ID= novel_gene_chr2_467 TPM= 3.19 Transcript Type= NA
chr2	23748664	23927114	23748664	23927114	-	ENST00000238789.9@ATAD2B	ENST00000238789.9	protein_coding	23926555,23895819,23888350,23887832,23885727,23884765,23880639,23875829,23869663,23867835,23864809,23863381,23857415,23833919,23828849,23823258,23819747,23810316,23798138,23788512,23786027,23782869,23765506,23762209,23757418,23754647,23754179,23748664	23927114,23895970,23888399,23887985,23885829,23884873,23880755,23875904,23869761,23867946,23864924,23863555,23857503,23834078,23828939,23823569,23819882,23810502,23798323,23788647,23786223,23783028,23765628,23762346,23758101,23754774,23754307,23752087	Gene ID= ENSG00000119778.14 TPM= 2.12 Transcript Type= protein_coding
chr2	23815463	23818385	23815463	23818385	+	transcript495.chr2.nnic@NA	transcript495.chr2.nnic	NA	23815463	23818385	Gene ID= novel_gene_chr2_496 TPM= 4.25 Transcript Type= NA
chr2	23927265	24000820	23927265	24000820	+	transcript479.chr2.nnic@UBXN2A	transcript479.chr2.nnic	protein_coding	23927265,23939540,23958301,23971276,23976969,23982896,23984673,23999672	23927615,23939676,23958355,23971414,23977075,23983033,23984831,24000820	Gene ID= ENSG00000173960.13 TPM= 3.19 Transcript Type= NA
chr2	23940419	24004909	23940419	24004909	+	ENST00000309033.4@UBXN2A	ENST00000309033.4	protein_coding	23940419,23958301,23971276,23976969,23982896,23984673,23999672	23940648,23958355,23971414,23977075,23983033,23984831,24004909	Gene ID= ENSG00000173960.13 TPM= 3.19 Transcript Type= protein_coding
chr2	23940675	24000820	23940675	24000820	+	transcript487.chr2.nnic@UBXN2A	transcript487.chr2.nnic	protein_coding	23940675,23958301,23971276,23976969,23982896,23984673,23999672	23940856,23958355,23971414,23977075,23983033,23984831,24000820	Gene ID= ENSG00000173960.13 TPM= 3.19 Transcript Type= NA
chr2	24029340	24047353	24029340	24047353	-	ENST00000295148.8@WDCP	ENST00000295148.8	protein_coding	24047314,24037677,24032829,24029340	24047353,24039512,24032946,24031162	Gene ID= ENSG00000163026.11 TPM= 3.19 Transcript Type= protein_coding
chr2	24067584	24076443	24067584	24076443	-	ENST00000233468.4@SF3B6	ENST00000233468.4	protein_coding	24076200,24074076,24068321,24067584	24076443,24074194,24068459,24067851	Gene ID= ENSG00000115128.6 TPM= 78.07 Transcript Type= protein_coding
chr2	24067584	24076375	24067584	24076375	-	transcript531.chr2.nnic@SF3B6	transcript531.chr2.nnic	protein_coding	24076200,24068321,24067584	24076375,24068459,24067851	Gene ID= ENSG00000115128.6 TPM= 5.84 Transcript Type= NA
chr2	24123428	24169637	24123428	24169637	+	transcript502.chr2.nnic@FAM228B	transcript502.chr2.nnic	protein_coding	24123428,24135119,24137909,24139370,24146748,24146930,24164198,24169356	24123533,24135187,24138100,24139450,24146835,24147086,24164335,24169637	Gene ID= ENSG00000219626.8 TPM= 3.19 Transcript Type= NA
chr2	24076837	24097468	24076837	24097468	+	transcript529.chr2.nic@FAM228B	transcript529.chr2.nic	protein_coding	24076837,24080876,24095141	24076969,24080955,24097468	Gene ID= ENSG00000219626.8 TPM= 2.12 Transcript Type= NA
chr2	24077433	24085215	24077433	24085215	-	ENST00000335934.8@TP53I3	ENST00000335934.8	protein_coding	24084731,24084189,24082885,24080819,24079444,24077433	24085215,24084331,24083152,24081031,24079640,24077761	Gene ID= ENSG00000115129.13 TPM= 4.25 Transcript Type= protein_coding
chr2	24077435	24085181	24077435	24085181	-	ENST00000238721.8@TP53I3	ENST00000238721.8	protein_coding	24084189,24082885,24080819,24079444,24077435	24085181,24083152,24081031,24079640,24077761	Gene ID= ENSG00000115129.13 TPM= 3.19 Transcript Type= protein_coding
chr2	24115397	24123319	24115397	24123319	-	ENST00000465360.1@PFN4	ENST00000465360.1	protein_coding	24123118,24121163,24119577,24115397	24123319,24121300,24119682,24115611	Gene ID= ENSG00000176732.6 TPM= 1.06 Transcript Type= processed_transcript
chr2	24158198	24160602	24158198	24160602	-	transcript534.chr2.nnic@NA	transcript534.chr2.nnic	NA	24158198	24160602	Gene ID= novel_gene_chr2_535 TPM= 4.25 Transcript Type= NA
chr2	24271853	24360528	24271853	24360528	-	transcript540.chr2.nic@ITSN2	transcript540.chr2.nic	protein_coding	24360304,24328052,24315132,24313460,24312212,24310489,24310284,24308617,24303799,24301965,24301154,24299909,24298665,24295664,24293688,24286212,24284763,24275713,24271853	24360528,24328115,24315224,24313523,24312375,24310692,24310380,24308756,24303862,24302102,24301239,24300171,24298814,24295804,24293775,24286351,24284843,24275849,24271941	Gene ID= ENSG00000198399.14 TPM= 2.12 Transcript Type= NA
chr2	24271853	24360535	24271853	24360535	-	transcript546.chr2.nic@ITSN2	transcript546.chr2.nic	protein_coding	24360304,24328052,24315132,24313460,24312212,24310489,24310284,24308617,24303799,24301965,24301154,24299909,24298665,24295664,24293688,24286212,24275713,24271853	24360535,24328115,24315224,24313523,24312375,24310692,24310380,24308756,24303862,24302102,24301239,24300171,24298814,24295804,24293775,24286351,24275849,24271941	Gene ID= ENSG00000198399.14 TPM= 4.25 Transcript Type= NA
chr2	24247203	24251324	24247203	24251324	-	transcript559.chr2.nic@ITSN2	transcript559.chr2.nic	protein_coding	24248837,24247203	24251324,24248750	Gene ID= ENSG00000198399.14 TPM= 3.19 Transcript Type= NA
chr2	24491070	24492972	24491070	24492972	+	transcript572.chr2.nnic@NA	transcript572.chr2.nnic	NA	24491070	24492972	Gene ID= novel_gene_chr2_573 TPM= 7.44 Transcript Type= NA
chr2	24491752	24768541	24491752	24768541	+	transcript560.chr2.nnic@NCOA1	transcript560.chr2.nnic	protein_coding	24491752,24496320,24563904,24564295,24584476,24643966,24658661,24665749,24673366,24682951,24691481,24693252,24697658,24705086,24706568,24710931,24726589,24728308,24729501,24739432,24741784,24751982,24757973,24762687,24768079,24768221	24492188,24496499,24564013,24564430,24584560,24644122,24658766,24665915,24673463,24683128,24691660,24693347,24697798,24705233,24707888,24711111,24726706,24728476,24729815,24739533,24742186,24752156,24758156,24762776,24768135,24768541	Gene ID= ENSG00000084676.15 TPM= 5.31 Transcript Type= NA
chr2	24491251	24707693	24491251	24707693	+	transcript563.chr2.nnic@NCOA1	transcript563.chr2.nnic	protein_coding	24491251,24564295,24584476,24643966,24658661,24665749,24673366,24682951,24691481,24693252,24697658,24705086,24706568	24491602,24564430,24584560,24644122,24658766,24665915,24673463,24683128,24691660,24693347,24697798,24705233,24707693	Gene ID= ENSG00000084676.15 TPM= 7.44 Transcript Type= NA
chr2	24789734	24793382	24789734	24793382	-	ENST00000328379.5@PTRHD1	ENST00000328379.5	protein_coding	24793126,24789734	24793382,24790581	Gene ID= ENSG00000184924.5 TPM= 2.12 Transcript Type= protein_coding
chr2	24793145	24822376	24793145	24822376	+	ENST00000473706.5@CENPO	ENST00000473706.5	protein_coding	24793145,24799675,24814376,24815497,24816646,24817670,24819354	24793501,24799844,24814493,24815756,24816817,24817841,24822376	Gene ID= ENSG00000138092.10 TPM= 2.12 Transcript Type= protein_coding
chr2	24819172	24920237	24819172	24920237	-	transcript575.chr2.nic@ADCY3	transcript575.chr2.nic	protein_coding	24919683,24918313,24872570,24842254,24841556,24841259,24839873,24838445,24836917,24834794,24834485,24831662,24830709,24827902,24827546,24826045,24824378,24823209,24822511,24821517,24820724,24819172	24920237,24919184,24872719,24842384,24841667,24841386,24840031,24838622,24837045,24834936,24834646,24831749,24830825,24828161,24827608,24826126,24824536,24823355,24822630,24821640,24820848,24820114	Gene ID= ENSG00000138031.14 TPM= 12.75 Transcript Type= NA
chr2	24943636	24972094	24943636	24972094	-	ENST00000264711.6@DNAJC27	ENST00000264711.6	protein_coding	24971818,24967211,24963405,24957810,24957043,24951394,24943636	24972094,24967293,24963474,24957974,24957165,24951554,24947748	Gene ID= ENSG00000115137.11 TPM= 1.06 Transcript Type= protein_coding
chr2	24943636	24972094	24943636	24972094	-	ENST00000534855.5@DNAJC27	ENST00000534855.5	protein_coding	24971818,24967211,24963405,24957810,24957043,24943636	24972094,24967293,24963474,24957974,24957165,24947748	Gene ID= ENSG00000115137.11 TPM= 1.06 Transcript Type= protein_coding
chr2	24972183	24972830	24972183	24972830	+	ENST00000421842.1@DNAJC27-AS1	ENST00000421842.1	antisense_RNA	24972183,24972626	24972232,24972830	Gene ID= ENSG00000224165.5 TPM= 7.44 Transcript Type= antisense_RNA
chr2	25042130	25159137	25042130	25159137	+	ENST00000403714.7@EFR3B	ENST00000403714.7	protein_coding	25042130,25091325,25093003,25103637,25121673,25128183,25129975,25130552,25131368,25131750,25132903,25133383,25135467,25136523,25137341,25139059,25141366,25143735,25144960,25149694,25151914,25153712,25154235	25042319,25091401,25093130,25103787,25121794,25128332,25130109,25130630,25131503,25131911,25133014,25133434,25135639,25136598,25137502,25139190,25141433,25143862,25145051,25149742,25152020,25153761,25159137	Gene ID= ENSG00000084710.13 TPM= 54.17 Transcript Type= protein_coding
chr2	25255621	25342007	25255621	25342007	-	transcript598.chr2.nnic@DNMT3A	transcript598.chr2.nnic	protein_coding	25341826,25313913,25300139,25282441,25275500,25274941,25255621	25342007,25314161,25300243,25282711,25275543,25275087,25256075	Gene ID= ENSG00000119772.16 TPM= 2.12 Transcript Type= NA
chr2	25232976	25341885	25232976	25341885	-	ENST00000321117.9@DNMT3A	ENST00000321117.9	protein_coding	25341826,25313913,25300139,25282441,25275500,25274941,25248037,25247591,25247051,25246620,25246160,25246020,25245253,25244540,25244155,25243898,25241562,25240640,25240302,25239130,25236936,25235707,25232976	25341885,25314161,25300243,25282711,25275543,25275087,25248252,25247749,25247158,25246776,25246309,25246064,25245332,25244652,25244338,25243982,25241707,25240730,25240450,25239215,25237005,25235825,25234420	Gene ID= ENSG00000119772.16 TPM= 10.62 Transcript Type= protein_coding
chr2	25377243	25673634	25377243	25673634	-	ENST00000407661.7@DTNB	ENST00000407661.7	protein_coding	25673386,25652594,25639014,25628171,25607236,25596086,25580721,25576838,25531473,25482796,25455405,25451548,25433910,25432886,25427535,25419515,25388202,25387289,25379290,25377243	25673634,25652661,25639094,25628384,25607321,25596240,25580826,25577004,25531597,25482873,25455494,25451635,25433995,25432999,25427631,25419535,25388361,25387378,25379323,25377553	Gene ID= ENSG00000138101.18 TPM= 1.06 Transcript Type= protein_coding
chr2	25419251	25673574	25419251	25673574	-	transcript603.chr2.nic@DTNB	transcript603.chr2.nic	protein_coding	25673386,25652594,25639014,25628171,25607236,25596086,25580721,25576838,25531473,25482796,25455405,25451548,25433910,25432886,25427535,25419251	25673574,25652661,25639094,25628384,25607321,25596240,25580826,25577004,25531597,25482873,25455494,25451635,25433995,25432999,25427631,25419535	Gene ID= ENSG00000138101.18 TPM= 2.12 Transcript Type= NA
chr2	26034110	26137454	26034110	26137454	+	ENST00000264710.4@RAB10	ENST00000264710.4	protein_coding	26034110,26098662,26109768,26127144,26127850,26134938	26034735,26098722,26109906,26127233,26127951,26137454	Gene ID= ENSG00000084733.10 TPM= 92.41 Transcript Type= protein_coding
chr2	26180716	26189644	26180716	26189644	+	ENST00000407684.1@GAREM2	ENST00000407684.1	protein_coding	26180716,26182967,26184233,26186189,26187231,26187715	26182493,26183097,26185276,26186358,26187315,26189644	Gene ID= ENSG00000157833.12 TPM= 2.12 Transcript Type= protein_coding
chr2	26190635	26244726	26190635	26244726	-	ENST00000380649.7@HADHA	ENST00000380649.7	protein_coding	26244530,26239102,26238934,26236855,26234217,26232160,26230192,26215053,26214443,26212570,26209780,26204062,26201149,26197691,26195092,26194570,26193577,26192310,26191483,26190635	26244726,26239143,26239004,26236988,26234355,26232279,26230294,26215175,26214561,26212626,26209889,26204196,26201320,26197777,26195232,26194638,26193772,26192424,26191628,26191395	Gene ID= ENSG00000084754.10 TPM= 54.17 Transcript Type= protein_coding
chr2	26244748	26290464	26244748	26290464	+	ENST00000537713.5@HADHB	ENST00000537713.5	protein_coding	26244748,26254247,26254430,26263380,26273651,26277073,26278614,26279135,26279994,26282845,26283004,26284117,26284883,26285407,26289918	26244990,26254318,26254474,26263479,26273750,26277160,26278801,26279315,26280115,26282924,26283051,26284204,26284957,26285571,26290464	Gene ID= ENSG00000138029.13 TPM= 32.26 Transcript Type= protein_coding
chr2	26244895	26290468	26244895	26290468	+	ENST00000317799.9@HADHB	ENST00000317799.9	protein_coding	26244895,26254247,26254430,26263380,26269953,26273651,26277073,26278614,26279135,26279994,26282845,26283004,26284117,26284883,26285407,26289918	26244990,26254318,26254474,26263479,26269997,26273750,26277160,26278801,26279315,26280115,26282924,26283051,26284204,26284957,26285571,26290468	Gene ID= ENSG00000138029.13 TPM= 855.96 Transcript Type= protein_coding
chr2	26244926	26290412	26244926	26290412	+	ENST00000405867.7@HADHB	ENST00000405867.7	protein_coding	26244926,26254247,26254430,26263380,26269953,26273651,26277073,26279994,26282845,26283004,26284117,26284883,26285407,26289918	26244990,26254318,26254474,26263479,26269997,26273750,26277160,26280115,26282924,26283051,26284204,26284957,26285571,26290412	Gene ID= ENSG00000138029.13 TPM= 1.27 Transcript Type= protein_coding
chr2	26346114	26395891	26346114	26395891	+	ENST00000260585.11@SELENOI	ENST00000260585.11	protein_coding	26346114,26364302,26364832,26367146,26373367,26375040,26383299,26384959,26386354,26389005	26346289,26364370,26364940,26367220,26373629,26375148,26383347,26385139,26386536,26395891	Gene ID= ENSG00000138018.17 TPM= 2.12 Transcript Type= protein_coding
chr2	26377868	26378516	26377868	26378516	-	transcript676.chr2.nnic@NA	transcript676.chr2.nnic	NA	26377868	26378516	Gene ID= novel_gene_chr2_677 TPM= 2.12 Transcript Type= NA
chr2	26764263	26778849	26764263	26778849	+	transcript684.chr2.nic@SLC35F6	transcript684.chr2.nic	protein_coding	26764263,26774251,26775464,26778042	26764426,26774323,26775676,26778849	Gene ID= ENSG00000213699.8 TPM= 3.19 Transcript Type= NA
chr2	26768658	26770080	26768658	26770080	-	transcript687.chr2.nnic@NA	transcript687.chr2.nnic	NA	26768658	26770080	Gene ID= novel_gene_chr2_688 TPM= 2.12 Transcript Type= NA
chr2	26970612	27027196	26970612	27027196	+	ENST00000233121.6@MAPRE3	ENST00000233121.6	protein_coding	26970612,27022212,27023332,27024096,27025583,27025880,27026280	26970802,27022339,27023477,27024297,27025737,27026032,27027196	Gene ID= ENSG00000084764.10 TPM= 49.92 Transcript Type= protein_coding
chr2	26970619	27027196	26970619	27027196	+	transcript694.chr2.nnic@MAPRE3	transcript694.chr2.nnic	protein_coding	26970619,27022212,27023332,27024222,27025583,27025880,27026280	26970802,27022339,27023477,27024297,27025737,27026032,27027196	Gene ID= ENSG00000084764.10 TPM= 7.44 Transcript Type= NA
chr2	26970619	27027196	26970619	27027196	+	transcript696.chr2.nic@MAPRE3	transcript696.chr2.nic	protein_coding	26970619,27022212,27023332,27025583,27025880,27026280	26970802,27022339,27024297,27025737,27026032,27027196	Gene ID= ENSG00000084764.10 TPM= 7.44 Transcript Type= NA
chr2	26970658	27027196	26970658	27027196	+	ENST00000405074.7@MAPRE3	ENST00000405074.7	protein_coding	26970658,27022212,27023332,27024096,27025583,27025880,27026280	26970802,27022339,27023477,27024252,27025737,27026032,27027196	Gene ID= ENSG00000084764.10 TPM= 15.93 Transcript Type= protein_coding
chr2	27010712	27012217	27010712	27012217	+	transcript698.chr2.nnic@NA	transcript698.chr2.nnic	NA	27010712	27012217	Gene ID= novel_gene_chr2_699 TPM= 2.12 Transcript Type= NA
chr2	27032954	27041695	27032954	27041695	+	ENST00000238788.13@TMEM214	ENST00000238788.13	protein_coding	27032954,27034067,27035135,27035594,27035970,27036487,27036705,27037077,27037561,27038146,27038484,27038702,27039047,27039741,27040030,27040345,27040711	27033166,27034266,27035285,27035728,27036052,27036592,27036786,27037178,27037702,27038237,27038532,27038815,27039164,27039837,27040198,27040496,27041695	Gene ID= ENSG00000119777.18 TPM= 67.45 Transcript Type= protein_coding
chr2	27032977	27041693	27032977	27041693	+	ENST00000404032.7@TMEM214	ENST00000404032.7	protein_coding	27032977,27034067,27035135,27035970,27036487,27036705,27037077,27037561,27038146,27038484,27038702,27039047,27039741,27040030,27040345,27040711	27033166,27034266,27035285,27036052,27036592,27036786,27037178,27037702,27038237,27038532,27038815,27039164,27039837,27040198,27040496,27041693	Gene ID= ENSG00000119777.18 TPM= 61.07 Transcript Type= protein_coding
chr2	27034603	27037588	27034603	27037588	-	transcript703.chr2.nnic@NA	transcript703.chr2.nnic	NA	27034603	27037588	Gene ID= novel_gene_chr2_704 TPM= 5.31 Transcript Type= NA
chr2	27051678	27059535	27051678	27059535	+	ENST00000323064.12@AGBL5	ENST00000323064.12	protein_coding	27051678,27052913,27053402,27053896,27054630,27055075,27055682,27056623,27057303,27058400,27059190	27051793,27053173,27053573,27054059,27054807,27055253,27056138,27056792,27057438,27058602,27059535	Gene ID= ENSG00000084693.15 TPM= 21.24 Transcript Type= protein_coding
chr2	27070472	27071773	27070472	27071773	-	ENST00000456793.1@OST4	ENST00000456793.1	protein_coding	27071601,27071326,27070472	27071773,27071463,27070721	Gene ID= ENSG00000228474.5 TPM= 338.83 Transcript Type= protein_coding
chr2	27078567	27086408	27078567	27086408	+	ENST00000380320.8@EMILIN1	ENST00000380320.8	protein_coding	27078567,27080151,27080732,27082083,27084415,27084991,27085160,27085678	27079235,27080270,27080952,27084011,27084531,27085008,27085297,27086408	Gene ID= ENSG00000138080.13 TPM= 43.55 Transcript Type= protein_coding
chr2	27100601	27119130	27100601	27119130	-	transcript719.chr2.nnic@CGREF1	transcript719.chr2.nnic	protein_coding	27118846,27104287,27102526,27102360,27102097,27101445,27100601	27119130,27104377,27102591,27102430,27102221,27101888,27101393	Gene ID= ENSG00000138028.15 TPM= 2.12 Transcript Type= NA
chr2	27130756	27134675	27130756	27134675	-	ENST00000260643.6@PREB	ENST00000260643.6	protein_coding	27134287,27133532,27133117,27132843,27132603,27132230,27132010,27131672,27130756	27134675,27133721,27133337,27132923,27132727,27132403,27132082,27131831,27131508	Gene ID= ENSG00000138073.13 TPM= 101.17 Transcript Type= protein_coding
chr2	27130756	27134623	27130756	27134623	-	transcript715.chr2.nic@PREB	transcript715.chr2.nic	protein_coding	27134287,27133117,27132843,27132603,27132230,27132010,27131672,27130756	27134623,27133721,27132923,27132727,27132403,27132082,27131831,27131508	Gene ID= ENSG00000138073.13 TPM= 8.76 Transcript Type= NA
chr2	27130759	27134646	27130759	27134646	-	transcript729.chr2.nnic@PREB	transcript729.chr2.nnic	protein_coding	27134287,27132843,27132603,27132010,27130759	27134646,27132923,27132727,27132082,27131508	Gene ID= ENSG00000138073.13 TPM= 5.23 Transcript Type= NA
chr2	27130775	27134612	27130775	27134612	-	ENST00000406567.7@PREB	ENST00000406567.7	protein_coding	27134287,27133532,27133117,27132843,27132603,27132010,27131672,27130775	27134612,27133721,27133337,27132923,27132727,27132082,27131831,27131508	Gene ID= ENSG00000138073.13 TPM= 11.15 Transcript Type= protein_coding
chr2	27199587	27212286	27199587	27212286	-	ENST00000310574.7@SLC5A6	ENST00000310574.7	protein_coding	27212020,27211467,27207258,27206877,27206483,27206026,27205350,27204791,27204461,27203779,27203233,27202813,27201988,27201666,27201350,27200998,27199587	27212286,27211533,27207790,27206942,27206534,27206093,27205504,27204931,27204590,27203867,27203345,27202880,27202074,27201847,27201453,27201113,27200579	Gene ID= ENSG00000138074.14 TPM= 20.18 Transcript Type= protein_coding
chr2	27212370	27217178	27212370	27217178	+	ENST00000405489.7@ATRAID	ENST00000405489.7	protein_coding	27212370,27213177,27215321,27215474,27215632,27216523,27216844	27212607,27213298,27215392,27215545,27215753,27216620,27217178	Gene ID= ENSG00000138085.16 TPM= 65.85 Transcript Type= protein_coding
chr2	27253507	27254887	27253507	27254887	-	transcript749.chr2.nnic@NA	transcript749.chr2.nnic	NA	27253507	27254887	Gene ID= novel_gene_chr2_750 TPM= 2.12 Transcript Type= NA
chr2	27254572	27263259	27254572	27263259	-	ENST00000233535.8@SLC30A3	ENST00000233535.8	protein_coding	27262812,27258753,27258161,27257905,27257154,27256788,27256386,27254572	27263259,27258934,27258307,27258058,27257352,27256893,27256520,27255460	Gene ID= ENSG00000115194.10 TPM= 20.71 Transcript Type= protein_coding
chr2	27254572	27263062	27254572	27263062	-	transcript746.chr2.nic@SLC30A3	transcript746.chr2.nic	protein_coding	27262812,27258753,27258161,27257905,27257154,27256788,27254572	27263062,27258934,27258307,27258058,27257352,27256893,27256520	Gene ID= ENSG00000115194.10 TPM= 4.78 Transcript Type= NA
chr2	27282416	27307432	27282416	27307432	+	transcript756.chr2.nnic@TRIM54	transcript756.chr2.nnic	protein_coding	27282416,27298567,27299245,27304959,27305584,27306080,27306213,27306456,27306887	27282899,27298739,27299416,27305054,27305817,27306102,27306337,27306568,27307432	Gene ID= ENSG00000138100.13 TPM= 11.37 Transcript Type= NA
chr2	27282425	27307435	27282425	27307435	+	transcript759.chr2.nnic@TRIM54	transcript759.chr2.nnic	protein_coding	27282425,27298567,27299245,27305584,27306080,27306213,27306456,27306887	27282899,27298739,27299416,27305817,27306102,27306337,27306542,27307435	Gene ID= ENSG00000138100.13 TPM= 15.61 Transcript Type= NA
chr2	27282392	27307435	27282392	27307435	+	ENST00000380075.6@TRIM54	ENST00000380075.6	protein_coding	27282392,27298567,27299245,27304959,27305584,27306080,27306213,27306456,27306887	27282899,27298739,27299416,27305054,27305817,27306102,27306337,27306542,27307435	Gene ID= ENSG00000138100.13 TPM= 101.65 Transcript Type= protein_coding
chr2	27282462	27307439	27282462	27307439	+	ENST00000296098.4@TRIM54	ENST00000296098.4	protein_coding	27282462,27298567,27299245,27299530,27304959,27305584,27306080,27306213,27306456,27306887	27282899,27298739,27299416,27299655,27305054,27305817,27306102,27306337,27306542,27307439	Gene ID= ENSG00000138100.13 TPM= 13.49 Transcript Type= protein_coding
chr2	27283683	27288148	27283683	27288148	-	transcript781.chr2.nnic@NA	transcript781.chr2.nnic	NA	27283683	27288148	Gene ID= novel_gene_chr2_782 TPM= 2.12 Transcript Type= NA
chr2	27289862	27293453	27289862	27293453	-	transcript783.chr2.nnic@NA	transcript783.chr2.nnic	NA	27289862	27293453	Gene ID= novel_gene_chr2_784 TPM= 16.99 Transcript Type= NA
chr2	27307744	27309398	27307744	27309398	+	transcript779.chr2.nnic@NA	transcript779.chr2.nnic	NA	27307744	27309398	Gene ID= novel_gene_chr2_780 TPM= 4.25 Transcript Type= NA
chr2	27309492	27323112	27309492	27323112	-	transcript768.chr2.nnic@MPV17	transcript768.chr2.nnic	protein_coding	27323052,27322448,27312680,27312494,27312214,27311899,27309492	27323112,27322522,27312772,27312589,27312246,27311951,27309981	Gene ID= ENSG00000115204.14 TPM= 4.54 Transcript Type= NA
chr2	27309493	27323112	27309493	27323112	-	transcript772.chr2.nnic@MPV17	transcript772.chr2.nnic	protein_coding	27323052,27322448,27312994,27312680,27312406,27309493	27323112,27322522,27313109,27312772,27312589,27309981	Gene ID= ENSG00000115204.14 TPM= 3.82 Transcript Type= NA
chr2	27309530	27323112	27309530	27323112	-	transcript773.chr2.nic@MPV17	transcript773.chr2.nic	protein_coding	27323052,27322448,27312994,27312680,27312494,27309530	27323112,27322522,27313109,27312772,27312589,27309981	Gene ID= ENSG00000115204.14 TPM= 2.12 Transcript Type= NA
chr2	27311073	27313387	27311073	27313387	-	ENST00000616707.1@MPV17	ENST00000616707.1	protein_coding	27311073	27313387	Gene ID= ENSG00000115204.14 TPM= 14.87 Transcript Type= retained_intron
chr2	27309494	27323102	27309494	27323102	-	ENST00000380044.5@MPV17	ENST00000380044.5	protein_coding	27323052,27322448,27312994,27312680,27312494,27312214,27311899,27309494	27323102,27322522,27313109,27312772,27312589,27312246,27311951,27309981	Gene ID= ENSG00000115204.14 TPM= 66.14 Transcript Type= protein_coding
chr2	27309492	27322564	27309492	27322564	-	ENST00000233545.6@MPV17	ENST00000233545.6	protein_coding	27322448,27312994,27312680,27312494,27312214,27311899,27309492	27322564,27313109,27312772,27312589,27312246,27311951,27309981	Gene ID= ENSG00000115204.14 TPM= 17.28 Transcript Type= protein_coding
chr2	27309540	27323083	27309540	27323083	-	ENST00000426513.6@MPV17	ENST00000426513.6	protein_coding	27323052,27322448,27312994,27312680,27312494,27312214,27311899,27309540	27323083,27322522,27313074,27312772,27312589,27312246,27311951,27309981	Gene ID= ENSG00000115204.14 TPM= 3.19 Transcript Type= nonsense_mediated_decay
chr2	27309492	27323054	27309492	27323054	-	ENST00000402310.5@MPV17	ENST00000402310.5	protein_coding	27323052,27322448,27312994,27312680,27312494,27312214,27309492	27323054,27322522,27313109,27312772,27312589,27312246,27309981	Gene ID= ENSG00000115204.14 TPM= 1.7 Transcript Type= protein_coding
chr2	27325849	27357034	27325849	27357034	-	ENST00000264720.7@GTF3C2	ENST00000264720.7	protein_coding	27356739,27343308,27342826,27341948,27337926,27337481,27337244,27336198,27335917,27335598,27333974,27333655,27329379,27329121,27328844,27328468,27328037,27327177,27325849	27357034,27343578,27343147,27342233,27338020,27337558,27337342,27336425,27336028,27335706,27333999,27333784,27329523,27329282,27328931,27328596,27328189,27327284,27326893	Gene ID= ENSG00000115207.13 TPM= 11.68 Transcript Type= protein_coding
chr2	27364352	27370486	27364352	27370486	-	ENST00000347454.8@EIF2B4	ENST00000347454.8	protein_coding	27370284,27369876,27369414,27369006,27368654,27368372,27368025,27367746,27367457,27367074,27366759,27364718,27364352	27370486,27369919,27369549,27369212,27368733,27368463,27368139,27367822,27367559,27367201,27366936,27364898,27364599	Gene ID= ENSG00000115211.15 TPM= 98.33 Transcript Type= protein_coding
chr2	27364358	27370372	27364358	27370372	-	transcript821.chr2.nnic@EIF2B4	transcript821.chr2.nnic	protein_coding	27370284,27369876,27369414,27369006,27368654,27368372,27367457,27367074,27366759,27364718,27364358	27370372,27369919,27369549,27369212,27368733,27368463,27367559,27367201,27366936,27364898,27364599	Gene ID= ENSG00000115211.15 TPM= 4.16 Transcript Type= NA
chr2	27364399	27370326	27364399	27370326	-	ENST00000493344.6@EIF2B4	ENST00000493344.6	protein_coding	27369876,27369414,27369006,27368654,27368372,27368025,27367746,27367457,27367074,27366759,27364718,27364399	27370326,27369549,27369212,27368733,27368463,27368139,27367822,27367559,27367201,27366936,27364898,27364599	Gene ID= ENSG00000115211.15 TPM= 6.37 Transcript Type= protein_coding
chr2	27364363	27370300	27364363	27370300	-	ENST00000622434.4@EIF2B4	ENST00000622434.4	protein_coding	27370106,27369876,27369414,27369006,27368654,27368372,27368025,27367805,27367746,27367457,27367074,27366759,27364718,27364363	27370300,27369919,27369549,27369212,27368733,27368463,27368139,27367822,27367802,27367559,27367201,27366936,27364898,27364599	Gene ID= ENSG00000115211.15 TPM= 2.04 Transcript Type= protein_coding
chr2	27364377	27370315	27364377	27370315	-	ENST00000405940.6@EIF2B4	ENST00000405940.6	protein_coding	27370284,27369876,27369414,27369006,27368654,27368372,27368025,27367746,27367457,27367074,27366759,27364718,27364377	27370315,27369919,27369549,27369212,27368733,27368463,27368113,27367822,27367559,27367201,27366936,27364898,27364599	Gene ID= ENSG00000115211.15 TPM= 2.12 Transcript Type= nonsense_mediated_decay
chr2	27370522	27377128	27370522	27377128	+	ENST00000233575.6@SNX17	ENST00000233575.6	protein_coding	27370522,27371269,27372623,27373247,27373861,27374085,27374346,27374689,27375061,27375506,27375846,27376106,27376313,27376479,27376606	27370806,27371343,27372740,27373311,27373971,27374175,27374433,27374758,27375153,27375709,27375971,27376183,27376387,27376520,27377128	Gene ID= ENSG00000115234.10 TPM= 266.78 Transcript Type= protein_coding
chr2	27370496	27377533	27370496	27377533	+	ENST00000537606.5@SNX17	ENST00000537606.5	protein_coding	27370496,27372623,27373247,27373861,27374085,27374346,27374689,27375061,27375506,27375846,27376106,27376313,27376479,27376606	27370806,27372740,27373311,27373971,27374175,27374433,27374758,27375153,27375709,27375971,27376183,27376387,27376520,27377533	Gene ID= ENSG00000115234.10 TPM= 4.25 Transcript Type= protein_coding
chr2	27370628	27377123	27370628	27377123	+	ENST00000427123.5@SNX17	ENST00000427123.5	protein_coding	27370628,27371269,27372623,27373040,27373247,27373861,27374085,27374346,27374689,27375061,27375506,27375846,27376106,27376313,27376479,27376606	27370806,27371343,27372740,27373113,27373311,27373971,27374175,27374433,27374758,27375153,27375709,27375971,27376183,27376387,27376520,27377123	Gene ID= ENSG00000115234.10 TPM= 3.9 Transcript Type= nonsense_mediated_decay
chr2	27374325	27377010	27374325	27377010	-	transcript841.chr2.nnic@NA	transcript841.chr2.nnic	NA	27374325	27377010	Gene ID= novel_gene_chr2_842 TPM= 3.19 Transcript Type= NA
chr2	27377235	27380760	27377235	27380760	-	transcript833.chr2.nic@ZNF513	transcript833.chr2.nic	protein_coding	27380472,27380093,27378884,27378467,27377235	27380760,27380248,27379054,27378615,27378371	Gene ID= ENSG00000163795.13 TPM= 8.76 Transcript Type= NA
chr2	27377235	27380808	27377235	27380808	-	transcript838.chr2.nic@ZNF513	transcript838.chr2.nic	protein_coding	27380761,27380093,27378467,27377235	27380808,27380248,27379054,27378371	Gene ID= ENSG00000163795.13 TPM= 5.23 Transcript Type= NA
chr2	27377231	27380725	27377231	27380725	-	ENST00000323703.10@ZNF513	ENST00000323703.10	protein_coding	27380472,27380093,27378467,27377231	27380725,27380248,27379054,27378371	Gene ID= ENSG00000163795.13 TPM= 24.34 Transcript Type= protein_coding
chr2	27377235	27380444	27377235	27380444	-	ENST00000407879.1@ZNF513	ENST00000407879.1	protein_coding	27380093,27378467,27377235	27380444,27379054,27378371	Gene ID= ENSG00000163795.13 TPM= 4.16 Transcript Type= protein_coding
chr2	27381194	27409604	27381194	27409604	-	transcript822.chr2.nic@PPM1G	transcript822.chr2.nic	protein_coding	27409303,27387089,27386194,27385747,27384975,27384673,27383952,27383366,27382476,27382126,27381194	27409604,27387158,27386279,27385879,27385088,27384767,27384092,27383600,27382605,27382228,27381805	Gene ID= ENSG00000115241.10 TPM= 5.31 Transcript Type= NA
chr2	27383997	27409605	27383997	27409605	-	transcript831.chr2.nic@PPM1G	transcript831.chr2.nic	protein_coding	27409303,27387089,27386194,27385747,27384673,27383997	27409605,27387158,27386279,27385879,27385088,27384092	Gene ID= ENSG00000115241.10 TPM= 2.12 Transcript Type= NA
chr2	27381194	27409687	27381194	27409687	-	ENST00000344034.4@PPM1G	ENST00000344034.4	protein_coding	27409303,27387089,27386194,27385747,27384673,27383952,27383366,27382476,27382126,27381194	27409687,27387158,27386279,27385879,27385088,27384092,27383600,27382605,27382228,27381805	Gene ID= ENSG00000115241.10 TPM= 83.91 Transcript Type= protein_coding
chr2	27427790	27442259	27427790	27442259	+	ENST00000233557.7@NRBP1	ENST00000233557.7	protein_coding	27427790,27428318,27433249,27433673,27433989,27434471,27434722,27435133,27436753,27437047,27437262,27439766,27440403,27440652,27440805,27441127,27441267,27441567,27441708	27428182,27428731,27433483,27433795,27434090,27434560,27434762,27435227,27436836,27437105,27437360,27439898,27440508,27440702,27440940,27441180,27441330,27441622,27442259	Gene ID= ENSG00000115216.13 TPM= 146.66 Transcript Type= protein_coding
chr2	27428597	27442259	27428597	27442259	+	transcript847.chr2.nnic@NRBP1	transcript847.chr2.nnic	protein_coding	27428597,27433249,27433673,27433989,27434471,27434722,27436753,27437047,27437262,27439766,27440403,27440652,27440805,27441127,27441267,27441567,27441708	27428731,27433483,27433795,27434090,27434560,27434762,27436836,27437105,27437360,27439898,27440508,27440702,27440940,27441180,27441330,27441622,27442259	Gene ID= ENSG00000115216.13 TPM= 12.3 Transcript Type= NA
chr2	27428640	27442255	27428640	27442255	+	ENST00000379852.7@NRBP1	ENST00000379852.7	protein_coding	27428640,27433254,27433673,27433989,27434471,27434722,27435133,27436753,27437047,27437262,27439766,27440403,27440652,27440805,27441127,27441267,27441567,27441708	27428731,27433483,27433795,27434090,27434560,27434762,27435227,27436836,27437105,27437360,27439898,27440508,27440702,27440940,27441180,27441330,27441622,27442255	Gene ID= ENSG00000115216.13 TPM= 13.54 Transcript Type= protein_coding
chr2	27444371	27489757	27444371	27489757	-	ENST00000260570.7@IFT172	ENST00000260570.7	protein_coding	27489615,27485360,27485018,27484227,27483872,27483580,27483289,27481046,27480026,27479509,27477995,27477559,27477217,27476641,27472250,27470928,27465746,27465411,27463097,27462701,27461759,27461269,27461015,27459709,27459378,27458779,27458126,27457841,27457639,27456511,27454567,27454354,27453982,27453630,27453384,27449998,27449691,27449499,27449294,27448915,27447812,27447515,27446260,27445929,27445745,27445296,27445014,27444371	27489757,27485503,27485130,27484266,27483937,27483659,27483376,27481260,27480149,27479604,27478156,27477612,27477320,27476726,27472362,27471095,27465882,27465518,27463181,27462793,27461836,27461517,27461093,27459829,27459522,27458868,27458223,27457976,27457755,27456653,27454660,27454418,27454162,27453739,27453513,27450096,27449800,27449562,27449380,27449031,27447922,27447634,27446355,27445988,27445843,27445449,27445105,27444521	Gene ID= ENSG00000138002.14 TPM= 10.62 Transcript Type= protein_coding
chr2	27491901	27495254	27491901	27495254	-	transcript861.chr2.nic@FNDC4	transcript861.chr2.nic	protein_coding	27494878,27494547,27494351,27493930,27493389,27491901	27495254,27494703,27494466,27494134,27493478,27492478	Gene ID= ENSG00000115226.9 TPM= 3.19 Transcript Type= NA
chr2	27491883	27495245	27491883	27495245	-	ENST00000264703.3@FNDC4	ENST00000264703.3	protein_coding	27494878,27494547,27494351,27493930,27493389,27492666,27491883	27495245,27494703,27494466,27494134,27493478,27492790,27492478	Gene ID= ENSG00000115226.9 TPM= 9.56 Transcript Type= protein_coding
chr2	27583030	27623215	27583030	27623215	+	ENST00000355467.5@ZNF512	ENST00000355467.5	protein_coding	27583030,27583658,27598067,27599583,27599970,27600691,27601356,27602463,27603140,27607845,27615168,27616262,27617473,27621153	27583142,27583716,27598254,27599678,27600053,27600815,27601442,27602561,27603307,27608039,27615269,27616324,27617571,27623215	Gene ID= ENSG00000243943.9 TPM= 10.62 Transcript Type= protein_coding
chr2	27582969	27623215	27582969	27623215	+	ENST00000556601.5@ZNF512	ENST00000556601.5	protein_coding	27582969,27598067,27599583,27599970,27600691,27601356,27602463,27603140,27607845,27615168,27616262,27617473,27621153	27583142,27598254,27599678,27600053,27600815,27601442,27602561,27603307,27608039,27615269,27616324,27617571,27623215	Gene ID= ENSG00000243943.9 TPM= 6.37 Transcript Type= protein_coding
chr2	27583030	27623094	27583030	27623094	+	ENST00000379717.5@ZNF512	ENST00000379717.5	protein_coding	27583030,27583658,27598070,27599583,27599970,27600691,27601356,27602463,27603140,27607845,27615168,27616262,27617473,27621153	27583142,27583716,27598254,27599678,27600053,27600815,27601442,27602561,27603307,27608039,27615269,27616324,27617571,27623094	Gene ID= ENSG00000243943.9 TPM= 11.68 Transcript Type= protein_coding
chr2	27625639	27629012	27625639	27629012	-	ENST00000324364.3@CCDC121	ENST00000324364.3	protein_coding	27628950,27625639	27629012,27627917	Gene ID= ENSG00000176714.9 TPM= 4.25 Transcript Type= protein_coding
chr2	27628996	27651508	27628996	27651508	+	ENST00000264718.7@GPN1	ENST00000264718.7	protein_coding	27628996,27629859,27631027,27631834,27632633,27634846,27635140,27638210,27638885,27640043,27641240,27642429,27647836,27650115	27629169,27629952,27631066,27631900,27632670,27634924,27635234,27638255,27639031,27640125,27641279,27642519,27647943,27651508	Gene ID= ENSG00000198522.13 TPM= 50.98 Transcript Type= protein_coding
chr2	27650812	27663809	27650812	27663809	-	ENST00000337768.9@SUPT7L	ENST00000337768.9	protein_coding	27663329,27662179,27660984,27657345,27655365,27650812	27663809,27662281,27661388,27657669,27655602,27653747	Gene ID= ENSG00000119760.15 TPM= 3.19 Transcript Type= protein_coding
chr2	27650812	27663840	27650812	27663840	-	ENST00000404798.6@SUPT7L	ENST00000404798.6	protein_coding	27663329,27662179,27657345,27655365,27650812	27663840,27662281,27657669,27655602,27653747	Gene ID= ENSG00000119760.15 TPM= 1.06 Transcript Type= protein_coding
chr2	27653052	27663640	27653052	27663640	-	ENST00000406540.5@SUPT7L	ENST00000406540.5	protein_coding	27663329,27660984,27657345,27655365,27653052	27663640,27662281,27657669,27655602,27653747	Gene ID= ENSG00000119760.15 TPM= 4.25 Transcript Type= protein_coding
chr2	27654717	27657077	27654717	27657077	+	transcript895.chr2.nnic@NA	transcript895.chr2.nnic	NA	27654717	27657077	Gene ID= novel_gene_chr2_896 TPM= 3.19 Transcript Type= NA
chr2	27663504	27685125	27663504	27685125	+	transcript877.chr2.nic@SLC4A1AP	transcript877.chr2.nic	protein_coding	27663504,27665100,27667268,27668843,27669248,27675532,27677295,27677738,27682248,27685037	27664577,27665295,27667390,27668903,27669387,27675692,27677364,27677924,27682359,27685125	Gene ID= ENSG00000163798.13 TPM= 41.42 Transcript Type= NA
chr2	27710169	27713184	27710169	27713184	+	transcript920.chr2.nnic@NA	transcript920.chr2.nnic	NA	27710169	27713184	Gene ID= novel_gene_chr2_921 TPM= 30.8 Transcript Type= NA
chr2	27771717	27779741	27771717	27779741	+	ENST00000296102.7@MRPL33	ENST00000296102.7	protein_coding	27771717,27772674,27774424,27779433	27771799,27772692,27774530,27779741	Gene ID= ENSG00000243147.7 TPM= 128.17 Transcript Type= protein_coding
chr2	27771717	27779734	27771717	27779734	+	ENST00000379666.7@MRPL33	ENST00000379666.7	protein_coding	27771717,27772674,27779433	27771799,27772692,27779734	Gene ID= ENSG00000243147.7 TPM= 257.22 Transcript Type= protein_coding
chr2	27771975	27779731	27771975	27779731	+	ENST00000483992.5@MRPL33	ENST00000483992.5	protein_coding	27771975,27772674,27779433	27772385,27772692,27779731	Gene ID= ENSG00000243147.7 TPM= 5.84 Transcript Type= processed_transcript
chr2	27781364	27891098	27781364	27891098	-	ENST00000302188.7@RBKS	ENST00000302188.7	protein_coding	27890257,27858439,27848034,27847042,27843067,27832686,27827567,27781364	27891098,27858571,27848097,27847104,27843231,27832777,27827755,27781788	Gene ID= ENSG00000171174.13 TPM= 3.19 Transcript Type= protein_coding
chr2	27890729	28338901	27890729	28338901	+	ENST00000344773.6@BABAM2	ENST00000344773.6	protein_coding	27890729,27894533,27929832,27987993,28025226,28045725,28129271,28237202,28241323,28244780,28298338,28327274,28338450	27890842,27894684,27929908,27988087,28025420,28045799,28129380,28237301,28241393,28244862,28298491,28327447,28338901	Gene ID= ENSG00000158019.20 TPM= 11.33 Transcript Type= protein_coding
chr2	27890750	28338901	27890750	28338901	+	ENST00000379624.5@BABAM2	ENST00000379624.5	protein_coding	27890750,27894533,27929832,27987993,28025226,28045725,28129271,28237202,28241323,28244780,28298338,28338450	27890842,27894684,27929908,27988087,28025420,28045799,28129380,28237301,28241393,28244862,28298491,28338901	Gene ID= ENSG00000158019.20 TPM= 53.82 Transcript Type= protein_coding
chr2	27890793	28338901	27890793	28338901	+	ENST00000361704.6@BABAM2	ENST00000361704.6	protein_coding	27890793,27894533,27929832,27987993,28025226,28045725,28129271,28237202,28241323,28244780,28298338,28310082,28338450	27890842,27894684,27929908,27988087,28025420,28045799,28129380,28237301,28241393,28244862,28298491,28310153,28338901	Gene ID= ENSG00000158019.20 TPM= 11.33 Transcript Type= protein_coding
chr2	28392852	28412967	28392852	28412967	+	transcript939.chr2.nnic@FOSL2	transcript939.chr2.nnic	protein_coding	28392852,28404107,28408759,28410473,28411930	28393822,28404358,28408866,28410575,28412967	Gene ID= ENSG00000075426.11 TPM= 6.37 Transcript Type= NA
chr2	28392858	28417312	28392858	28417312	+	ENST00000264716.8@FOSL2	ENST00000264716.8	protein_coding	28392858,28404107,28408759,28411930	28393822,28404358,28408866,28417312	Gene ID= ENSG00000075426.11 TPM= 33.99 Transcript Type= protein_coding
chr2	28406046	28409632	28406046	28409632	-	transcript948.chr2.nnic@NA	transcript948.chr2.nnic	NA	28406046	28409632	Gene ID= novel_gene_chr2_949 TPM= 40.36 Transcript Type= NA
chr2	28751042	28801037	28751042	28801037	+	transcript953.chr2.nic@PPP1CB	transcript953.chr2.nic	protein_coding	28751042,28752038,28776851,28778809,28781738,28783907,28788658,28793863,28799199	28751783,28752176,28776982,28779039,28781842,28783978,28788809,28793997,28801037	Gene ID= ENSG00000213639.9 TPM= 30.04 Transcript Type= NA
chr2	28751814	28801648	28751814	28801648	+	ENST00000296122.10@PPP1CB	ENST00000296122.10	protein_coding	28751814,28752038,28776851,28778809,28781738,28783907,28788658,28793863,28799199	28751924,28752176,28776982,28779039,28781842,28783978,28788809,28793997,28801648	Gene ID= ENSG00000213639.9 TPM= 16.41 Transcript Type= protein_coding
chr2	28751748	28802930	28751748	28802930	+	ENST00000358506.6@PPP1CB	ENST00000358506.6	protein_coding	28751748,28752038,28776851,28778809,28781738,28783907,28788658,28793863,28799199	28751820,28752176,28776982,28779039,28781842,28783978,28788809,28793997,28802930	Gene ID= ENSG00000213639.9 TPM= 18.72 Transcript Type= protein_coding
chr2	28751853	28802940	28751853	28802940	+	ENST00000395366.2@PPP1CB	ENST00000395366.2	protein_coding	28751853,28776851,28778809,28781738,28783907,28788658,28793863,28799199	28752176,28776982,28779039,28781842,28783978,28788809,28793997,28802940	Gene ID= ENSG00000213639.9 TPM= 39.96 Transcript Type= protein_coding
chr2	28849821	28870312	28849821	28870312	-	transcript969.chr2.nic@TRMT61B	transcript969.chr2.nic	protein_coding	28869579,28865017,28861118,28852408,28851099,28850328,28849821	28870312,28865119,28861308,28852499,28851298,28850405,28850242	Gene ID= ENSG00000171103.10 TPM= 2.12 Transcript Type= NA
chr2	28849821	28870305	28849821	28870305	-	transcript970.chr2.nnic@TRMT61B	transcript970.chr2.nnic	protein_coding	28869579,28852408,28851072,28850328,28849821	28870305,28852499,28851298,28850405,28850242	Gene ID= ENSG00000171103.10 TPM= 2.12 Transcript Type= NA
chr2	28849821	28870301	28849821	28870301	-	ENST00000306108.9@TRMT61B	ENST00000306108.9	protein_coding	28869579,28865017,28861118,28852408,28851072,28850328,28849821	28870301,28865119,28861308,28852499,28851298,28850405,28850242	Gene ID= ENSG00000171103.10 TPM= 27.62 Transcript Type= protein_coding
chr2	28894643	28948222	28894643	28948222	+	ENST00000407426.7@WDR43	ENST00000407426.7	protein_coding	28894643,28901987,28906460,28912590,28914069,28917893,28922919,28924982,28926468,28927569,28929579,28935521,28936922,28937931,28941461,28942312,28946450,28946600	28894923,28902124,28906581,28912710,28914208,28917995,28922983,28925153,28926554,28927700,28929710,28935607,28936953,28937994,28941574,28942381,28946499,28948222	Gene ID= ENSG00000163811.11 TPM= 21.24 Transcript Type= protein_coding
chr2	29115525	29145309	29115525	29145309	+	transcript990.chr2.nic@CLIP4	transcript990.chr2.nic	protein_coding	29115525,29121374,29131258,29132152,29133655,29135548,29143709,29145232	29115665,29121521,29131397,29132245,29133816,29135666,29143945,29145309	Gene ID= ENSG00000115295.19 TPM= 2.12 Transcript Type= NA
chr2	29115426	29183813	29115426	29183813	+	ENST00000320081.9@CLIP4	ENST00000320081.9	protein_coding	29115426,29121374,29131258,29132152,29133655,29135548,29143709,29145232,29152685,29156354,29157204,29160333,29163831,29167476,29174373,29181572	29115665,29121521,29131397,29132245,29133816,29135666,29143945,29145367,29152828,29156443,29157347,29160467,29163954,29167540,29174445,29183813	Gene ID= ENSG00000115295.19 TPM= 43.55 Transcript Type= protein_coding
chr2	30146941	30160533	30146941	30160533	+	ENST00000379520.7@YPEL5	ENST00000379520.7	protein_coding	30146941,30148245,30155850,30156628,30158619	30147062,30148541,30155910,30156792,30160533	Gene ID= ENSG00000119801.12 TPM= 1.86 Transcript Type= protein_coding
chr2	30146937	30160533	30146937	30160533	+	transcript995.chr2.nnic@YPEL5	transcript995.chr2.nnic	protein_coding	30146937,30155850,30156628,30158619	30147062,30155910,30156792,30160533	Gene ID= ENSG00000119801.12 TPM= 9.29 Transcript Type= NA
chr2	30146941	30160533	30146941	30160533	+	ENST00000379519.7@YPEL5	ENST00000379519.7	protein_coding	30146941,30148245,30156628,30158619	30147062,30148541,30156792,30160533	Gene ID= ENSG00000119801.12 TPM= 5.05 Transcript Type= protein_coding
chr2	30147516	30159551	30147516	30159551	+	ENST00000402708.5@YPEL5	ENST00000402708.5	protein_coding	30147516,30155850,30156628,30158619	30148091,30155910,30156792,30159551	Gene ID= ENSG00000119801.12 TPM= 1.59 Transcript Type= protein_coding
chr2	30146961	30160533	30146961	30160533	+	ENST00000261353.8@YPEL5	ENST00000261353.8	protein_coding	30146961,30156628,30158619	30147062,30156792,30160533	Gene ID= ENSG00000119801.12 TPM= 47.53 Transcript Type= protein_coding
chr2	30152892	30156181	30152892	30156181	-	transcript1003.chr2.nnic@NA	transcript1003.chr2.nnic	NA	30152892	30156181	Gene ID= novel_gene_chr2_1004 TPM= 5.31 Transcript Type= NA
chr2	30231531	30260028	30231531	30260028	+	ENST00000395323.7@LBH	ENST00000395323.7	protein_coding	30231531,30234405,30257433	30231764,30234507,30260028	Gene ID= ENSG00000213626.11 TPM= 241.11 Transcript Type= protein_coding
chr2	30231529	30235705	30231529	30235705	+	transcript1008.chr2.nic@LBH	transcript1008.chr2.nic	protein_coding	30231529,30234405	30231764,30235705	Gene ID= ENSG00000213626.11 TPM= 8.5 Transcript Type= NA
chr2	30231537	30256701	30231537	30256701	+	ENST00000464412.5@LBH	ENST00000464412.5	protein_coding	30231537,30234405,30256539	30231764,30234507,30256701	Gene ID= ENSG00000213626.11 TPM= 2.12 Transcript Type= processed_transcript
chr2	30232250	30235703	30232250	30235703	+	transcript1009.chr2.nnic@NA	transcript1009.chr2.nnic	NA	30232250	30235703	Gene ID= novel_gene_chr2_1010 TPM= 5.31 Transcript Type= NA
chr2	30238887	30240189	30238887	30240189	-	transcript1011.chr2.nnic@NA	transcript1011.chr2.nnic	NA	30238887	30240189	Gene ID= novel_gene_chr2_1012 TPM= 11.68 Transcript Type= NA
chr2	30245962	30248710	30245962	30248710	-	transcript1013.chr2.nnic@NA	transcript1013.chr2.nnic	NA	30245962	30248710	Gene ID= novel_gene_chr2_1014 TPM= 3.19 Transcript Type= NA
chr2	30289104	30289676	30289104	30289676	-	transcript1017.chr2.nnic@NA	transcript1017.chr2.nnic	NA	30289104	30289676	Gene ID= novel_gene_chr2_1018 TPM= 2.12 Transcript Type= NA
chr2	30346642	30361010	30346642	30361010	+	transcript1021.chr2.nnic@LINC01936	transcript1021.chr2.nnic	lincRNA	30346642,30349937,30359468	30347115,30350146,30361010	Gene ID= ENSG00000235997.2 TPM= 32.93 Transcript Type= NA
chr2	30346642	30352427	30346642	30352427	+	transcript1022.chr2.nnic@LINC01936	transcript1022.chr2.nnic	lincRNA	30346642,30349937,30350925	30347115,30350158,30352427	Gene ID= ENSG00000235997.2 TPM= 8.5 Transcript Type= NA
chr2	30346659	30352431	30346659	30352431	+	ENST00000421976.2@LINC01936	ENST00000421976.2	lincRNA	30346659,30349937	30347115,30352431	Gene ID= ENSG00000235997.2 TPM= 20.18 Transcript Type= lincRNA
chr2	30447236	30644224	30447236	30644224	+	ENST00000379509.7@LCLAT1	ENST00000379509.7	protein_coding	30447236,30525587,30533116,30562146,30568060,30640117	30447383,30525755,30533314,30562292,30568176,30644224	Gene ID= ENSG00000172954.13 TPM= 81.79 Transcript Type= protein_coding
chr2	30447257	30644225	30447257	30644225	+	ENST00000309052.8@LCLAT1	ENST00000309052.8	protein_coding	30447257,30459552,30525587,30533116,30562146,30568060,30640117	30447404,30459722,30525755,30533314,30562292,30568176,30644225	Gene ID= ENSG00000172954.13 TPM= 81.79 Transcript Type= protein_coding
chr2	30568507	30572182	30568507	30572182	-	transcript1034.chr2.nnic@NA	transcript1034.chr2.nnic	NA	30568507	30572182	Gene ID= novel_gene_chr2_1035 TPM= 5.31 Transcript Type= NA
chr2	31234127	31262928	31234127	31262928	+	transcript1042.chr2.nic@EHD3	transcript1042.chr2.nic	protein_coding	31234127,31244274,31249371,31260510,31261549	31234848,31244450,31249468,31260922,31262928	Gene ID= ENSG00000013016.15 TPM= 3.19 Transcript Type= NA
chr2	31867823	32010678	31867823	32010678	-	transcript1046.chr2.nic@MEMO1	transcript1046.chr2.nic	protein_coding	32010187,31943302,31932067,31920798,31917926,31893242,31891992,31883386,31869848,31867823	32010678,31943383,31932135,31920910,31918037,31893321,31892134,31883462,31869952,31868492	Gene ID= ENSG00000162959.13 TPM= 4.16 Transcript Type= NA
chr2	31867823	32010678	31867823	32010678	-	transcript1059.chr2.nic@MEMO1	transcript1059.chr2.nic	protein_coding	32010187,31943302,31932067,31920798,31917926,31891992,31869848,31867823	32010678,31943383,31932135,31920910,31918037,31892134,31869952,31868492	Gene ID= ENSG00000162959.13 TPM= 6.29 Transcript Type= NA
chr2	31916523	32010678	31916523	32010678	-	transcript1064.chr2.nic@MEMO1	transcript1064.chr2.nic	protein_coding	32010187,31943302,31932067,31920798,31916523	32010678,31943383,31932135,31920910,31918037	Gene ID= ENSG00000162959.13 TPM= 5.93 Transcript Type= NA
chr2	31867823	32010974	31867823	32010974	-	ENST00000404530.5@MEMO1	ENST00000404530.5	protein_coding	32010942,32010187,31943302,31932067,31920798,31917926,31891992,31883386,31869848,31867823	32010974,32010264,31943383,31932135,31920910,31918037,31892134,31883462,31869952,31868492	Gene ID= ENSG00000162959.13 TPM= 14.42 Transcript Type= protein_coding
chr2	32011907	32039793	32011907	32039793	-	ENST00000414013.5@DPY30	ENST00000414013.5	protein_coding	32039733,32039421,32039279,32029594,32023422,32011907	32039793,32039492,32039326,32029736,32023474,32012052	Gene ID= ENSG00000162961.13 TPM= 1.06 Transcript Type= processed_transcript
chr2	32023892	32039812	32023892	32039812	-	ENST00000342166.9@DPY30	ENST00000342166.9	protein_coding	32039733,32039421,32039279,32029594,32023892	32039812,32039492,32039326,32029736,32024256	Gene ID= ENSG00000162961.13 TPM= 23.37 Transcript Type= protein_coding
chr2	32020081	32020982	32020081	32020982	+	transcript1073.chr2.nnic@NA	transcript1073.chr2.nnic	NA	32020081	32020982	Gene ID= novel_gene_chr2_1074 TPM= 2.12 Transcript Type= NA
chr2	32063611	32157636	32063611	32157636	+	ENST00000345662.5@SPAST	ENST00000345662.5	protein_coding	32063611,32087492,32089522,32114638,32115702,32116119,32126948,32128408,32136563,32136877,32137109,32141904,32143336,32144937,32147218,32154374	32064246,32087578,32089605,32114825,32115835,32116212,32127022,32128479,32136638,32136968,32137188,32141946,32143415,32145007,32147258,32157636	Gene ID= ENSG00000021574.11 TPM= 4.25 Transcript Type= protein_coding
chr2	32165864	32224379	32165864	32224379	+	ENST00000282587.9@SLC30A6	ENST00000282587.9	protein_coding	32165864,32171287,32174063,32175319,32184273,32192336,32192918,32193889,32197344,32197707,32204590,32206886,32209493,32220213	32165903,32171373,32174147,32175361,32184338,32192416,32192953,32193983,32197392,32197826,32204692,32206933,32209561,32224379	Gene ID= ENSG00000152683.14 TPM= 1.06 Transcript Type= protein_coding
chr2	32250679	32252006	32250679	32252006	+	transcript1084.chr2.nnic@NA	transcript1084.chr2.nnic	NA	32250679	32252006	Gene ID= novel_gene_chr2_1085 TPM= 2.12 Transcript Type= NA
chr2	32277910	32306586	32277910	32306586	+	transcript1095.chr2.nnic@YIPF4	transcript1095.chr2.nnic	protein_coding	32277910,32290483,32292177,32301382,32305489	32278234,32290636,32292348,32301495,32306586	Gene ID= ENSG00000119820.10 TPM= 4.25 Transcript Type= NA
chr2	32310504	32311742	32310504	32311742	+	transcript1099.chr2.nnic@NA	transcript1099.chr2.nnic	NA	32310504	32311742	Gene ID= novel_gene_chr2_1100 TPM= 2.12 Transcript Type= NA
chr2	32355872	32358026	32355872	32358026	-	transcript1107.chr2.nnic@NA	transcript1107.chr2.nnic	NA	32355872	32358026	Gene ID= novel_gene_chr2_1108 TPM= 2.12 Transcript Type= NA
chr2	32357028	32618899	32357028	32618899	+	ENST00000421745.6@BIRC6	ENST00000421745.6	protein_coding	32357028,32377588,32380153,32388750,32392039,32395511,32401163,32401463,32406499,32414769,32429146,32430865,32433644,32435496,32436053,32439508,32441329,32442065,32442324,32443491,32445521,32448795,32453808,32463194,32464509,32465065,32467525,32467903,32468437,32469395,32470168,32471014,32473112,32476213,32477368,32478635,32479462,32481320,32482429,32485643,32487647,32488588,32490041,32491425,32493540,32499547,32501713,32502795,32503042,32505005,32507980,32509738,32510526,32512933,32514990,32518254,32518817,32524888,32525464,32529651,32531355,32543241,32545643,32547850,32549313,32575156,32593915,32595034,32597751,32599739,32603006,32607455,32611448,32617725	32357486,32377769,32380290,32388943,32392150,32395593,32401385,32401623,32406557,32416163,32429295,32431090,32433804,32435585,32436184,32439686,32441462,32442226,32442455,32443588,32445668,32448928,32453942,32463381,32464823,32465164,32467739,32468111,32468783,32469614,32470301,32471124,32473239,32476344,32477583,32478818,32479617,32481453,32482582,32485759,32487801,32488714,32490151,32491558,32493667,32500109,32501888,32502891,32503236,32505205,32508259,32509994,32510634,32513154,32515770,32518397,32518946,32525019,32525628,32529824,32531551,32543541,32545860,32548014,32549481,32575366,32594060,32595144,32597968,32599900,32603083,32607643,32611582,32618899	Gene ID= ENSG00000115760.13 TPM= 2.12 Transcript Type= protein_coding
chr2	32628062	32821051	32628062	32821051	+	ENST00000317907.8@TTC27	ENST00000317907.8	protein_coding	32628062,32630523,32633876,32640270,32650131,32664303,32666635,32672272,32678856,32702807,32733828,32736694,32758292,32777882,32782626,32786984,32811024,32812504,32817457,32820816	32628380,32630700,32634005,32640410,32650233,32664467,32666768,32672384,32678922,32702920,32733923,32736816,32758519,32777980,32782678,32787149,32811221,32812615,32817557,32821051	Gene ID= ENSG00000018699.11 TPM= 20.18 Transcript Type= protein_coding
chr2	32723973	32727013	32723973	32727013	-	transcript1116.chr2.nnic@NA	transcript1116.chr2.nnic	NA	32723973	32727013	Gene ID= novel_gene_chr2_1117 TPM= 5.31 Transcript Type= NA
chr2	32946944	33360625	32946944	33360625	+	transcript1126.chr2.nic@LTBP1	transcript1126.chr2.nic	protein_coding	32946944,32948875,33020909,33110582,33134793,33186856,33188577,33217552,33222080,33243662,33252677,33257284,33259588,33262722,33263294,33273656,33274965,33275801,33280039,33293160,33300451,33301522,33309434,33315144,33347367,33360597	32947818,32948945,33021206,33110751,33134960,33187080,33188851,33217654,33222151,33243784,33252844,33257511,33259610,33262821,33263392,33273781,33275090,33275923,33280158,33293282,33300573,33301644,33309556,33315269,33347510,33360625	Gene ID= ENSG00000049323.15 TPM= 7.44 Transcript Type= NA
chr2	32946944	33360625	32946944	33360625	+	transcript1127.chr2.nic@LTBP1	transcript1127.chr2.nic	protein_coding	32946944,32948875,33020909,33110582,33134793,33186856,33188577,33217552,33222080,33243662,33252677,33257443,33259588,33262722,33263294,33273656,33274965,33275801,33280039,33293160,33300451,33301522,33309434,33315144,33347367,33360597	32947818,32948945,33021206,33110751,33134960,33187080,33188851,33217654,33222151,33243784,33252844,33257511,33259610,33262821,33263392,33273781,33275090,33275923,33280158,33293282,33300573,33301644,33309556,33315269,33347510,33360625	Gene ID= ENSG00000049323.15 TPM= 11.68 Transcript Type= NA
chr2	32946944	32949620	32946944	32949620	+	transcript1133.chr2.nnic@LTBP1	transcript1133.chr2.nnic	protein_coding	32946944,32948875,32949387	32947818,32948945,32949620	Gene ID= ENSG00000049323.15 TPM= 2.12 Transcript Type= NA
chr2	32946944	32983832	32946944	32983832	+	transcript1134.chr2.nnic@LTBP1	transcript1134.chr2.nnic	protein_coding	32946944,32948875,32982268	32947818,32948945,32983832	Gene ID= ENSG00000049323.15 TPM= 2.12 Transcript Type= NA
chr2	32946944	32950575	32946944	32950575	+	transcript1135.chr2.nic@LTBP1	transcript1135.chr2.nic	protein_coding	32946944,32948875	32947818,32950575	Gene ID= ENSG00000049323.15 TPM= 5.31 Transcript Type= NA
chr2	32946972	33399359	32946972	33399359	+	ENST00000404816.6@LTBP1	ENST00000404816.6	protein_coding	32946972,32948875,33020909,33110582,33134793,33186856,33188577,33217552,33222080,33243662,33252677,33257284,33259588,33262722,33263294,33273656,33274965,33275801,33280039,33293160,33300451,33301522,33309434,33315144,33342838,33347367,33360597,33361429,33363390,33364216,33365333,33389184,33397133,33398364	32947818,32948945,33021206,33110751,33134960,33187080,33188851,33217654,33222151,33243784,33252844,33257511,33259610,33262821,33263392,33273781,33275090,33275923,33280158,33293282,33300573,33301644,33309556,33315269,33342963,33347510,33360779,33361515,33363518,33364356,33365503,33389306,33397282,33399359	Gene ID= ENSG00000049323.15 TPM= 39.3 Transcript Type= protein_coding
chr2	33170575	33173271	33170575	33173271	+	transcript1137.chr2.nnic@NA	transcript1137.chr2.nnic	NA	33170575	33173271	Gene ID= novel_gene_chr2_1138 TPM= 2.12 Transcript Type= NA
chr2	33276232	33276432	33276232	33276432	+	transcript1139.chr2.nnic@NA	transcript1139.chr2.nnic	NA	33276232	33276432	Gene ID= novel_gene_chr2_1140 TPM= 2.12 Transcript Type= NA
chr2	33352140	33352884	33352140	33352884	-	transcript1141.chr2.nnic@NA	transcript1141.chr2.nnic	NA	33352140	33352884	Gene ID= novel_gene_chr2_1142 TPM= 2.12 Transcript Type= NA
chr2	33375706	33378475	33375706	33378475	-	transcript1143.chr2.nnic@NA	transcript1143.chr2.nnic	NA	33375706	33378475	Gene ID= novel_gene_chr2_1144 TPM= 2.12 Transcript Type= NA
chr2	33436324	33564750	33436324	33564750	+	ENST00000402538.7@RASGRP3	ENST00000402538.7	protein_coding	33436324,33447820,33511710,33515010,33516542,33519952,33520553,33521955,33523879,33524432,33527137,33534323,33539094,33543512,33549604,33555531,33558211,33558672,33562729	33436591,33447943,33511842,33515206,33516644,33520014,33520684,33522102,33524052,33524548,33527412,33534400,33539210,33543627,33549751,33555567,33558336,33559030,33564750	Gene ID= ENSG00000152689.17 TPM= 2.12 Transcript Type= protein_coding
chr2	33458036	33563180	33458036	33563180	+	transcript1150.chr2.nic@RASGRP3	transcript1150.chr2.nic	protein_coding	33458036,33511710,33515010,33516542,33519952,33520553,33521955,33523879,33524432,33527137,33534323,33539094,33543512,33549604,33555531,33558211,33558672,33562729	33458130,33511842,33515206,33516644,33520014,33520684,33522102,33524052,33524548,33527412,33534400,33539210,33543627,33549751,33555567,33558336,33559030,33563180	Gene ID= ENSG00000152689.17 TPM= 10.62 Transcript Type= NA
chr2	33476228	33564731	33476228	33564731	+	ENST00000403687.7@RASGRP3	ENST00000403687.7	protein_coding	33476228,33511710,33515010,33516542,33519952,33520553,33521955,33523879,33524432,33527137,33534323,33539094,33543512,33549604,33555531,33558211,33558672,33562729	33476707,33511842,33515206,33516644,33520014,33520684,33522102,33524052,33524548,33527412,33534400,33539210,33543627,33549751,33555567,33558336,33559030,33564731	Gene ID= ENSG00000152689.17 TPM= 3.19 Transcript Type= protein_coding
chr2	33458036	33516788	33458036	33516788	+	transcript1161.chr2.nic@RASGRP3	transcript1161.chr2.nic	protein_coding	33458036,33511710,33515010,33516542	33458130,33511842,33515206,33516788	Gene ID= ENSG00000152689.17 TPM= 2.12 Transcript Type= NA
chr2	33476597	33516788	33476597	33516788	+	ENST00000482857.5@RASGRP3	ENST00000482857.5	protein_coding	33476597,33511710,33515010,33516542	33476707,33511842,33515206,33516788	Gene ID= ENSG00000152689.17 TPM= 3.19 Transcript Type= retained_intron
chr2	33583658	33599362	33583658	33599362	-	ENST00000238823.12@FAM98A	ENST00000238823.12	protein_coding	33599169,33595489,33592080,33588335,33587240,33586562,33585530,33583658	33599362,33595637,33592214,33588519,33587320,33586678,33585697,33585444	Gene ID= ENSG00000119812.18 TPM= 55.23 Transcript Type= protein_coding
chr2	36354749	36355600	36354749	36355600	-	transcript1170.chr2.nnic@AC009414.2	transcript1170.chr2.nnic	lincRNA	36355088,36354749	36355600,36354981	Gene ID= ENSG00000260025.1 TPM= 15.93 Transcript Type= NA
chr2	36355926	36551135	36355926	36551135	+	ENST00000280527.6@CRIM1	ENST00000280527.6	protein_coding	36355926,36396614,36441258,36442615,36464534,36476889,36479497,36499219,36509983,36512273,36513556,36517327,36522092,36537352,36544376,36546984,36548525	36356623,36396787,36441500,36442735,36464655,36477071,36479694,36499347,36510139,36512394,36513765,36517542,36522313,36537546,36544498,36547171,36551135	Gene ID= ENSG00000150938.9 TPM= 15.93 Transcript Type= protein_coding
chr2	36357004	36363038	36357004	36363038	+	transcript1178.chr2.nnic@NA	transcript1178.chr2.nnic	NA	36357004	36363038	Gene ID= novel_gene_chr2_1179 TPM= 2.12 Transcript Type= NA
chr2	36379744	36381758	36379744	36381758	-	transcript1180.chr2.nnic@NA	transcript1180.chr2.nnic	NA	36379744	36381758	Gene ID= novel_gene_chr2_1181 TPM= 11.68 Transcript Type= NA
chr2	36395012	36398297	36395012	36398297	-	transcript1182.chr2.nnic@NA	transcript1182.chr2.nnic	NA	36395012	36398297	Gene ID= novel_gene_chr2_1183 TPM= 7.44 Transcript Type= NA
chr2	36509102	36510798	36509102	36510798	-	transcript1184.chr2.nnic@NA	transcript1184.chr2.nnic	NA	36509102	36510798	Gene ID= novel_gene_chr2_1185 TPM= 3.19 Transcript Type= NA
chr2	36552258	36598191	36552258	36598191	-	ENST00000379245.8@FEZ2	ENST00000379245.8	protein_coding	36597877,36590903,36583353,36581290,36578597,36560785,36558438,36555683,36552258	36598191,36591011,36583469,36581431,36578865,36560865,36558513,36555748,36553179	Gene ID= ENSG00000171055.14 TPM= 4.78 Transcript Type= protein_coding
chr2	36552294	36598142	36552294	36598142	-	ENST00000405912.7@FEZ2	ENST00000405912.7	protein_coding	36597877,36590903,36583353,36581290,36578597,36558438,36555683,36552294	36598142,36591011,36583469,36581431,36578865,36558513,36555748,36553179	Gene ID= ENSG00000171055.14 TPM= 4.78 Transcript Type= protein_coding
chr2	36835738	36838096	36835738	36838096	-	transcript1214.chr2.nnic@NA	transcript1214.chr2.nnic	NA	36835738	36838096	Gene ID= novel_gene_chr2_1215 TPM= 4.25 Transcript Type= NA
chr2	36835739	36966574	36835739	36966574	-	transcript1194.chr2.nnic@STRN	transcript1194.chr2.nnic	protein_coding	36966230,36925105,36916078,36905540,36902584,36899523,36893898,36886716,36883932,36877891,36869554,36867814,36861132,36857856,36855212,36851000,36849714,36849322,36835739	36966574,36925208,36916151,36905618,36902751,36899658,36894033,36886826,36884075,36878027,36869729,36867861,36861253,36858023,36855352,36851107,36849800,36849625,36835896	Gene ID= ENSG00000115808.11 TPM= 6.37 Transcript Type= NA
chr2	36846177	36966643	36846177	36966643	-	transcript1206.chr2.nic@STRN	transcript1206.chr2.nic	protein_coding	36966230,36925105,36916078,36905540,36902584,36899523,36893898,36883932,36877891,36869554,36867814,36861132,36857856,36855212,36851000,36849714,36846177	36966643,36925208,36916151,36905618,36902751,36899658,36894033,36884075,36878027,36869729,36867861,36861253,36858023,36855352,36851107,36849800,36849625	Gene ID= ENSG00000115808.11 TPM= 11.68 Transcript Type= NA
chr2	36837695	36839225	36837695	36839225	-	transcript1218.chr2.nnic@NA	transcript1218.chr2.nnic	NA	36837695	36839225	Gene ID= novel_gene_chr2_1219 TPM= 2.12 Transcript Type= NA
chr2	36841166	36843527	36841166	36843527	-	transcript1216.chr2.nnic@NA	transcript1216.chr2.nnic	NA	36841166	36843527	Gene ID= novel_gene_chr2_1217 TPM= 3.19 Transcript Type= NA
chr2	36843796	36845990	36843796	36845990	-	transcript1220.chr2.nnic@NA	transcript1220.chr2.nnic	NA	36843796	36845990	Gene ID= novel_gene_chr2_1221 TPM= 6.37 Transcript Type= NA
chr2	36981009	37020231	36981009	37020231	-	transcript1226.chr2.nnic@HEATR5B	transcript1226.chr2.nnic	protein_coding	37020154,37019809,37013841,37008611,37007050,37005632,37003542,37002306,37000586,36990648,36988646,36981009	37020231,37019877,37014020,37008848,37007304,37005759,37003686,37002572,37000813,36990799,36988859,36981794	Gene ID= ENSG00000008869.11 TPM= 4.78 Transcript Type= NA
chr2	36981009	37020016	36981009	37020016	-	transcript1228.chr2.nic@HEATR5B	transcript1228.chr2.nic	protein_coding	37019809,37013841,37008611,37007050,37005632,37003542,37002306,37000586,36990648,36988646,36981009	37020016,37014020,37008848,37007304,37005759,37003686,37002572,37000813,36990799,36988859,36981794	Gene ID= ENSG00000008869.11 TPM= 6.9 Transcript Type= NA
chr2	36982126	36984214	36982126	36984214	+	transcript1231.chr2.nnic@NA	transcript1231.chr2.nnic	NA	36982126	36984214	Gene ID= novel_gene_chr2_1232 TPM= 6.37 Transcript Type= NA
chr2	37084451	37099244	37084451	37099244	+	ENST00000409774.5@GPATCH11	ENST00000409774.5	protein_coding	37084451,37088369,37089640,37090681,37091916,37092165,37094082,37095437,37096208	37084570,37088440,37089866,37090722,37092036,37092255,37094195,37095518,37099244	Gene ID= ENSG00000152133.14 TPM= 9.56 Transcript Type= protein_coding
chr2	37099210	37157047	37099210	37157047	-	ENST00000233057.8@EIF2AK2	ENST00000233057.8	protein_coding	37156908,37148857,37147688,37146853,37141553,37139631,37138509,37138270,37136983,37135484,37126289,37122506,37119959,37114731,37109194,37107474,37099210	37157047,37149023,37147822,37146973,37141701,37139757,37138585,37138363,37137017,37135546,37126411,37122664,37120139,37114859,37109295,37107527,37107395	Gene ID= ENSG00000055332.16 TPM= 5.31 Transcript Type= protein_coding
chr2	37196523	37202692	37196523	37202692	+	ENST00000397226.2@CEBPZOS	ENST00000397226.2	protein_coding	37196523,37197254,37198494,37199704,37201048,37201642,37201863	37196669,37197350,37198672,37199819,37201092,37201726,37202692	Gene ID= ENSG00000218739.9 TPM= 2.12 Transcript Type= protein_coding
chr2	37196488	37204741	37196488	37204741	+	ENST00000402297.5@CEBPZOS	ENST00000402297.5	protein_coding	37196488,37199704,37201048,37201642,37201863	37196520,37199819,37201092,37201726,37204741	Gene ID= ENSG00000218739.9 TPM= 30.8 Transcript Type= protein_coding
chr2	37196508	37204739	37196508	37204739	+	ENST00000392061.6@CEBPZOS	ENST00000392061.6	protein_coding	37196508,37199704,37201048,37201642,37204304	37196520,37199819,37201092,37201726,37204739	Gene ID= ENSG00000218739.9 TPM= 13.81 Transcript Type= protein_coding
chr2	37201612	37231713	37201612	37231713	-	ENST00000234170.9@CEBPZ	ENST00000234170.9	protein_coding	37231412,37227544,37223170,37222380,37220385,37216984,37216316,37216140,37214886,37213864,37212335,37211843,37210999,37202950,37202784,37201612	37231713,37229036,37223401,37222563,37220473,37217037,37216418,37216208,37214952,37213961,37212392,37212039,37211082,37203008,37202865,37201903	Gene ID= ENSG00000115816.14 TPM= 21.24 Transcript Type= protein_coding
chr2	37202241	37208414	37202241	37208414	-	transcript1260.chr2.nnic@NA	transcript1260.chr2.nnic	NA	37202241	37208414	Gene ID= novel_gene_chr2_1261 TPM= 82.85 Transcript Type= NA
chr2	37231628	37249160	37231628	37249160	+	transcript1274.chr2.nic@NDUFAF7	transcript1274.chr2.nic	protein_coding	37231628,37232106,37236096,37237757,37241578,37243863,37246052,37247456,37248135	37231760,37232266,37236176,37237867,37241637,37243973,37246195,37247629,37249160	Gene ID= ENSG00000003509.15 TPM= 3.19 Transcript Type= NA
chr2	37231666	37249160	37231666	37249160	+	ENST00000002125.8@NDUFAF7	ENST00000002125.8	protein_coding	37231666,37232106,37236096,37237757,37241578,37242635,37243863,37246052,37247456,37248135	37231760,37232266,37236176,37237867,37241791,37242693,37243973,37246195,37247629,37249160	Gene ID= ENSG00000003509.15 TPM= 31.86 Transcript Type= protein_coding
chr2	37344574	37373322	37344574	37373322	+	ENST00000338415.7@QPCT	ENST00000338415.7	protein_coding	37344574,37352789,37359580,37367232,37369685,37372356,37372682	37344851,37352935,37359858,37367408,37369784,37372472,37373322	Gene ID= ENSG00000115828.15 TPM= 9.56 Transcript Type= protein_coding
chr2	37641882	37672535	37641882	37672535	-	ENST00000611976.1@CDC42EP3	ENST00000611976.1	protein_coding	37672353,37641882	37672535,37646822	Gene ID= ENSG00000163171.7 TPM= 97.72 Transcript Type= protein_coding
chr2	37652743	37656991	37652743	37656991	-	transcript1296.chr2.nnic@NA	transcript1296.chr2.nnic	NA	37652743	37656991	Gene ID= novel_gene_chr2_1297 TPM= 2.12 Transcript Type= NA
chr2	37667153	37669252	37667153	37669252	+	transcript1292.chr2.nnic@NA	transcript1292.chr2.nnic	NA	37667153	37669252	Gene ID= novel_gene_chr2_1293 TPM= 18.06 Transcript Type= NA
chr2	38069913	38076151	38069913	38076151	-	transcript1316.chr2.nic@CYP1B1	transcript1316.chr2.nic	protein_coding	38074346,38069913	38076151,38071310	Gene ID= ENSG00000138061.11 TPM= 19.12 Transcript Type= NA
chr2	38067507	38076181	38067507	38076181	-	ENST00000610745.4@CYP1B1	ENST00000610745.4	protein_coding	38075780,38074346,38067507	38076181,38075389,38071310	Gene ID= ENSG00000138061.11 TPM= 21.24 Transcript Type= protein_coding
chr2	38294880	38377262	38294880	38377262	-	ENST00000378954.8@ATL2	ENST00000378954.8	protein_coding	38377143,38343268,38318885,38318535,38315284,38314608,38313151,38310309,38309379,38300272,38299256,38298144,38294880	38377262,38343512,38319019,38318639,38315334,38314664,38313243,38310447,38309506,38300328,38299327,38298575,38296113	Gene ID= ENSG00000119787.13 TPM= 11.68 Transcript Type= protein_coding
chr2	38335901	38337515	38335901	38337515	+	transcript1328.chr2.nnic@NA	transcript1328.chr2.nnic	NA	38335901	38337515	Gene ID= novel_gene_chr2_1329 TPM= 8.5 Transcript Type= NA
chr2	38559520	38560028	38559520	38560028	+	transcript1332.chr2.nnic@NA	transcript1332.chr2.nnic	NA	38559520	38560028	Gene ID= novel_gene_chr2_1333 TPM= 2.12 Transcript Type= NA
chr2	38563508	38602922	38563508	38602922	-	transcript1336.chr2.nic@HNRNPLL	transcript1336.chr2.nic	protein_coding	38602438,38591530,38585644,38583841,38582072,38581913,38577920,38577461,38573210,38569804,38569133,38568386,38568199,38563508	38602922,38591648,38585881,38583926,38582168,38581985,38578002,38577532,38573427,38569925,38569334,38568443,38568297,38564237	Gene ID= ENSG00000143889.15 TPM= 2.12 Transcript Type= NA
chr2	38561978	38603029	38561978	38603029	-	ENST00000409636.5@HNRNPLL	ENST00000409636.5	protein_coding	38602857,38602438,38591530,38585644,38583841,38582072,38581913,38577461,38573210,38569804,38569133,38568386,38568199,38561978	38603029,38602600,38591648,38585881,38583926,38582168,38581985,38577532,38573427,38569925,38569334,38568443,38568297,38564237	Gene ID= ENSG00000143889.15 TPM= 4.25 Transcript Type= protein_coding
chr2	38563186	38603036	38563186	38603036	-	ENST00000608859.5@HNRNPLL	ENST00000608859.5	protein_coding	38602438,38591530,38585644,38583846,38582072,38581913,38577461,38573210,38569804,38569133,38568386,38568199,38563186	38603036,38591648,38585881,38583926,38582173,38581985,38577532,38573427,38569925,38569334,38568443,38568297,38564237	Gene ID= ENSG00000143889.15 TPM= 4.25 Transcript Type= protein_coding
chr2	38665910	38734768	38665910	38734768	+	ENST00000272252.9@GALM	ENST00000272252.9	protein_coding	38665910,38675912,38681280,38689813,38729556,38731735,38733488	38666351,38676066,38681486,38689894,38729697,38731909,38734768	Gene ID= ENSG00000143891.16 TPM= 12.75 Transcript Type= protein_coding
chr2	38743601	38751415	38743601	38751415	-	ENST00000425778.5@SRSF7	ENST00000425778.5	protein_coding	38751229,38750014,38749529,38748898,38748579,38748047,38746694,38746144,38743601	38751415,38750194,38749705,38749346,38748653,38748157,38746747,38746179,38745187	Gene ID= ENSG00000115875.18 TPM= 1.06 Transcript Type= nonsense_mediated_decay
chr2	38743599	38751494	38743599	38751494	-	ENST00000313117.10@SRSF7	ENST00000313117.10	protein_coding	38751229,38750014,38749529,38748579,38748047,38746694,38746144,38743599	38751494,38750194,38749705,38748653,38748157,38746747,38746179,38745187	Gene ID= ENSG00000115875.18 TPM= 10.62 Transcript Type= protein_coding
chr2	38743599	38751494	38743599	38751494	-	ENST00000446327.6@SRSF7	ENST00000446327.6	protein_coding	38751229,38750014,38749529,38748579,38748047,38746694,38743599	38751494,38750194,38749705,38748653,38748157,38746747,38745187	Gene ID= ENSG00000115875.18 TPM= 1.06 Transcript Type= protein_coding
chr2	38744893	38751358	38744893	38751358	-	ENST00000409276.5@SRSF7	ENST00000409276.5	protein_coding	38751229,38750014,38749529,38748579,38748056,38746694,38746144,38744893	38751358,38750194,38749705,38748653,38748157,38746747,38746179,38745187	Gene ID= ENSG00000115875.18 TPM= 10.62 Transcript Type= protein_coding
chr2	38744918	38751352	38744918	38751352	-	ENST00000443213.5@SRSF7	ENST00000443213.5	protein_coding	38751229,38750014,38748579,38748047,38746694,38746144,38744918	38751352,38750194,38749705,38748157,38746747,38746179,38745187	Gene ID= ENSG00000115875.18 TPM= 1.06 Transcript Type= nonsense_mediated_decay
chr2	38778185	38785000	38778185	38785000	+	ENST00000281950.7@GEMIN6	ENST00000281950.7	protein_coding	38778185,38778972,38781517	38778281,38779118,38785000	Gene ID= ENSG00000152147.10 TPM= 7.44 Transcript Type= protein_coding
chr2	38797729	38875908	38797729	38875908	-	ENST00000457308.5@DHX57	ENST00000457308.5	protein_coding	38875787,38868182,38863361,38862145,38860999,38858661,38856340,38855057,38854054,38848269,38847019,38843005,38837831,38828340,38826516,38825847,38822993,38819049,38818877,38815521,38813821,38806559,38802715,38797729	38875908,38868411,38863519,38862333,38861837,38858836,38856461,38855252,38854178,38848402,38847073,38843210,38837947,38828436,38826689,38826047,38823269,38819144,38818960,38815655,38813895,38806693,38802915,38798442	Gene ID= ENSG00000163214.20 TPM= 7.44 Transcript Type= protein_coding
chr2	38875962	38882709	38875962	38882709	+	ENST00000340556.10@MORN2	ENST00000340556.10	protein_coding	38875962,38880179,38880600,38881442,38882413	38876110,38880229,38880706,38881578,38882709	Gene ID= ENSG00000188010.12 TPM= 13.81 Transcript Type= protein_coding
chr2	38876011	38882647	38876011	38882647	+	ENST00000409665.5@MORN2	ENST00000409665.5	protein_coding	38876011,38880179,38880582,38881442,38882413	38876110,38880229,38880706,38881578,38882647	Gene ID= ENSG00000188010.12 TPM= 12.75 Transcript Type= protein_coding
chr2	38959287	38960342	38959287	38960342	-	ENST00000601251.2@AC019171.1	ENST00000601251.2	antisense_RNA	38959287	38960342	Gene ID= ENSG00000269210.2 TPM= 1.06 Transcript Type= antisense_RNA
chr2	39054341	39121064	39054341	39121064	-	transcript1380.chr2.nic@SOS1	transcript1380.chr2.nic	protein_coding	39120336,39067628,39058673,39056702,39054341	39121064,39067753,39058804,39056866,39054823	Gene ID= ENSG00000115904.12 TPM= 5.31 Transcript Type= NA
chr2	39286870	39437331	39286870	39437331	-	transcript1387.chr2.nic@MAP4K3	transcript1387.chr2.nic	protein_coding	39436892,39378066,39356249,39343388,39337526,39336920,39333532,39331917,39326146,39325899,39325730,39325518,39315310,39309461,39299743,39293230,39292773,39290292,39288121,39286870	39437331,39378123,39356339,39343452,39337581,39336967,39333574,39331989,39326277,39325961,39325811,39325628,39315388,39309519,39299801,39293268,39292826,39290334,39288280,39286964	Gene ID= ENSG00000011566.14 TPM= 3.54 Transcript Type= NA
chr2	39322669	39336500	39322669	39336500	-	transcript1401.chr2.nic@MAP4K3	transcript1401.chr2.nic	protein_coding	39333532,39331917,39326146,39325899,39325730,39322669	39336500,39331989,39326277,39325961,39325811,39325628	Gene ID= ENSG00000011566.14 TPM= 16.99 Transcript Type= NA
chr2	39249266	39437312	39249266	39437312	-	ENST00000263881.7@MAP4K3	ENST00000263881.7	protein_coding	39436892,39378066,39356249,39343388,39337526,39336920,39333532,39331917,39326146,39325899,39325730,39325518,39315310,39309461,39307943,39299743,39293230,39292773,39290292,39288121,39286852,39282513,39280272,39278407,39272482,39272283,39267189,39265203,39260606,39258519,39258348,39254450,39251830,39249266	39437312,39378123,39356339,39343452,39337581,39336967,39333574,39331989,39326277,39325961,39325811,39325628,39315388,39309519,39308005,39299801,39293268,39292826,39290334,39288280,39286964,39282554,39280356,39278486,39272542,39272400,39267247,39265306,39260777,39258587,39258440,39254520,39251885,39250705	Gene ID= ENSG00000011566.14 TPM= 7.79 Transcript Type= protein_coding
chr2	39249283	39437301	39249283	39437301	-	ENST00000341681.9@MAP4K3	ENST00000341681.9	protein_coding	39436892,39378066,39356249,39343388,39337526,39336920,39333532,39331917,39326146,39325899,39325730,39325518,39315310,39309461,39299743,39293230,39292773,39290292,39288121,39286852,39282513,39280272,39278407,39272482,39272283,39267189,39265203,39260606,39258519,39258348,39254450,39251830,39249283	39437301,39378123,39356339,39343452,39337581,39336967,39333574,39331989,39326277,39325961,39325811,39325628,39315388,39309519,39299801,39293268,39292826,39290334,39288280,39286964,39282554,39280356,39278486,39272542,39272400,39267247,39265306,39260777,39258587,39258440,39254520,39251885,39250705	Gene ID= ENSG00000011566.14 TPM= 20.53 Transcript Type= protein_coding
chr2	39274223	39276798	39274223	39276798	-	transcript1425.chr2.nnic@NA	transcript1425.chr2.nnic	NA	39274223	39276798	Gene ID= novel_gene_chr2_1426 TPM= 3.19 Transcript Type= NA
chr2	39352956	39355381	39352956	39355381	+	transcript1421.chr2.nnic@NA	transcript1421.chr2.nnic	NA	39352956	39355381	Gene ID= novel_gene_chr2_1422 TPM= 10.62 Transcript Type= NA
chr2	39425400	39429087	39425400	39429087	+	transcript1419.chr2.nnic@NA	transcript1419.chr2.nnic	NA	39425400	39429087	Gene ID= novel_gene_chr2_1420 TPM= 15.93 Transcript Type= NA
chr2	39437416	39601344	39437416	39601344	+	ENST00000449569.5@AC007388.1	ENST00000449569.5	antisense_RNA	39437416,39453839,39454297,39516414,39518583,39599366	39437535,39453931,39454365,39516541,39518710,39601344	Gene ID= ENSG00000231312.6 TPM= 1.06 Transcript Type= antisense_RNA
chr2	39480784	39486423	39480784	39486423	-	transcript1423.chr2.nnic@NA	transcript1423.chr2.nnic	NA	39480784	39486423	Gene ID= novel_gene_chr2_1424 TPM= 22.31 Transcript Type= NA
chr2	39494709	39497248	39494709	39497248	-	transcript1427.chr2.nnic@NA	transcript1427.chr2.nnic	NA	39494709	39497248	Gene ID= novel_gene_chr2_1428 TPM= 3.19 Transcript Type= NA
chr2	39736307	39779267	39736307	39779267	-	ENST00000378727.8@THUMPD2	ENST00000378727.8	protein_coding	39779114,39771505,39769710,39768424,39766057,39761331,39757248,39755889,39755295,39744370,39736307	39779267,39771640,39770119,39768501,39766109,39761418,39757368,39755960,39755409,39744478,39737059	Gene ID= ENSG00000138050.14 TPM= 5.31 Transcript Type= nonsense_mediated_decay
chr2	39736305	39779267	39736305	39779267	-	ENST00000505747.5@THUMPD2	ENST00000505747.5	protein_coding	39779114,39771505,39769710,39768424,39766057,39761331,39755889,39755295,39744370,39736305	39779267,39771640,39770119,39768501,39766109,39761418,39755960,39755409,39744478,39737059	Gene ID= ENSG00000138050.14 TPM= 7.44 Transcript Type= protein_coding
chr2	40112146	40512435	40112146	40512435	-	transcript1435.chr2.nic@SLC8A1	transcript1435.chr2.nic	protein_coding	40512349,40453161,40428473,40178387,40175261,40174825,40174706,40170281,40164854,40160765,40139401,40112146	40512435,40453349,40430304,40178493,40175281,40174842,40174720,40170349,40164984,40160864,40139676,40115629	Gene ID= ENSG00000183023.18 TPM= 79.13 Transcript Type= NA
chr2	40115113	40512435	40115113	40512435	-	ENST00000402441.5@SLC8A1	ENST00000402441.5	protein_coding	40512349,40428473,40177752,40174825,40164854,40160765,40139401,40115113	40512435,40430304,40177855,40174842,40164984,40160864,40139676,40115629	Gene ID= ENSG00000183023.18 TPM= 28.68 Transcript Type= protein_coding
chr2	40097774	40104003	40097774	40104003	-	transcript1507.chr2.nnic@NA	transcript1507.chr2.nnic	NA	40097774	40104003	Gene ID= novel_gene_chr2_1508 TPM= 2.12 Transcript Type= NA
chr2	40102456	40107297	40102456	40107297	+	transcript1481.chr2.nnic@NA	transcript1481.chr2.nnic	NA	40102456	40107297	Gene ID= novel_gene_chr2_1482 TPM= 75.41 Transcript Type= NA
chr2	40129236	40131714	40129236	40131714	-	transcript1495.chr2.nnic@NA	transcript1495.chr2.nnic	NA	40129236	40131714	Gene ID= novel_gene_chr2_1496 TPM= 2.12 Transcript Type= NA
chr2	40180966	40183981	40180966	40183981	-	transcript1497.chr2.nnic@NA	transcript1497.chr2.nnic	NA	40180966	40183981	Gene ID= novel_gene_chr2_1498 TPM= 2.12 Transcript Type= NA
chr2	40232414	40232752	40232414	40232752	-	transcript1499.chr2.nnic@NA	transcript1499.chr2.nnic	NA	40232414	40232752	Gene ID= novel_gene_chr2_1500 TPM= 2.12 Transcript Type= NA
chr2	40237306	40239264	40237306	40239264	-	transcript1509.chr2.nnic@NA	transcript1509.chr2.nnic	NA	40237306	40239264	Gene ID= novel_gene_chr2_1510 TPM= 3.19 Transcript Type= NA
chr2	40250791	40252378	40250791	40252378	+	transcript1487.chr2.nnic@NA	transcript1487.chr2.nnic	NA	40250791	40252378	Gene ID= novel_gene_chr2_1488 TPM= 2.12 Transcript Type= NA
chr2	40253883	40254174	40253883	40254174	+	transcript1455.chr2.nnic@NA	transcript1455.chr2.nnic	NA	40253883	40254174	Gene ID= novel_gene_chr2_1456 TPM= 7.44 Transcript Type= NA
chr2	40273866	40276414	40273866	40276414	-	transcript1501.chr2.nnic@NA	transcript1501.chr2.nnic	NA	40273866	40276414	Gene ID= novel_gene_chr2_1502 TPM= 4.25 Transcript Type= NA
chr2	40309682	40313643	40309682	40313643	-	transcript1511.chr2.nnic@NA	transcript1511.chr2.nnic	NA	40309682	40313643	Gene ID= novel_gene_chr2_1512 TPM= 2.12 Transcript Type= NA
chr2	40320981	40322524	40320981	40322524	+	transcript1465.chr2.nnic@NA	transcript1465.chr2.nnic	NA	40320981	40322524	Gene ID= novel_gene_chr2_1466 TPM= 67.98 Transcript Type= NA
chr2	40324037	40325802	40324037	40325802	+	transcript1457.chr2.nnic@NA	transcript1457.chr2.nnic	NA	40324037	40325802	Gene ID= novel_gene_chr2_1458 TPM= 92.41 Transcript Type= NA
chr2	40342011	40346071	40342011	40346071	+	transcript1459.chr2.nnic@NA	transcript1459.chr2.nnic	NA	40342011	40346071	Gene ID= novel_gene_chr2_1460 TPM= 89.22 Transcript Type= NA
chr2	40345820	40350618	40345820	40350618	+	transcript1461.chr2.nnic@NA	transcript1461.chr2.nnic	NA	40345820	40350618	Gene ID= novel_gene_chr2_1462 TPM= 149.76 Transcript Type= NA
chr2	40353139	40358069	40353139	40358069	+	transcript1475.chr2.nnic@NA	transcript1475.chr2.nnic	NA	40353139	40358069	Gene ID= novel_gene_chr2_1476 TPM= 12.75 Transcript Type= NA
chr2	40358981	40359945	40358981	40359945	+	transcript1483.chr2.nnic@NA	transcript1483.chr2.nnic	NA	40358981	40359945	Gene ID= novel_gene_chr2_1484 TPM= 7.44 Transcript Type= NA
chr2	40366772	40368902	40366772	40368902	-	transcript1489.chr2.nnic@NA	transcript1489.chr2.nnic	NA	40366772	40368902	Gene ID= novel_gene_chr2_1490 TPM= 3.19 Transcript Type= NA
chr2	40372604	40373004	40372604	40373004	-	transcript1513.chr2.nnic@NA	transcript1513.chr2.nnic	NA	40372604	40373004	Gene ID= novel_gene_chr2_1514 TPM= 2.12 Transcript Type= NA
chr2	40393652	40396775	40393652	40396775	+	transcript1469.chr2.nnic@NA	transcript1469.chr2.nnic	NA	40393652	40396775	Gene ID= novel_gene_chr2_1470 TPM= 106.22 Transcript Type= NA
chr2	40396928	40401588	40396928	40401588	+	transcript1463.chr2.nnic@NA	transcript1463.chr2.nnic	NA	40396928	40401588	Gene ID= novel_gene_chr2_1464 TPM= 43.55 Transcript Type= NA
chr2	40410047	40416073	40410047	40416073	+	transcript1473.chr2.nnic@NA	transcript1473.chr2.nnic	NA	40410047	40416073	Gene ID= novel_gene_chr2_1474 TPM= 55.23 Transcript Type= NA
chr2	40417238	40420370	40417238	40420370	+	transcript1477.chr2.nnic@NA	transcript1477.chr2.nnic	NA	40417238	40420370	Gene ID= novel_gene_chr2_1478 TPM= 7.44 Transcript Type= NA
chr2	40450296	40453393	40450296	40453393	-	transcript1491.chr2.nnic@NA	transcript1491.chr2.nnic	NA	40450296	40453393	Gene ID= novel_gene_chr2_1492 TPM= 3.19 Transcript Type= NA
chr2	40486723	40490083	40486723	40490083	-	transcript1505.chr2.nnic@NA	transcript1505.chr2.nnic	NA	40486723	40490083	Gene ID= novel_gene_chr2_1506 TPM= 4.25 Transcript Type= NA
chr2	40506354	40508364	40506354	40508364	+	transcript1479.chr2.nnic@NA	transcript1479.chr2.nnic	NA	40506354	40508364	Gene ID= novel_gene_chr2_1480 TPM= 3.19 Transcript Type= NA
chr2	42048003	42058528	42048003	42058528	+	transcript1525.chr2.nic@PKDCC	transcript1525.chr2.nic	protein_coding	42048003,42053239,42054036,42055286,42057221,42057603	42048838,42053361,42055020,42055393,42057394,42058528	Gene ID= ENSG00000162878.12 TPM= 14.34 Transcript Type= NA
chr2	42048020	42058528	42048020	42058528	+	ENST00000294964.5@PKDCC	ENST00000294964.5	protein_coding	42048020,42053239,42054036,42054941,42055286,42057221,42057603	42048838,42053361,42054307,42055020,42055393,42057394,42058528	Gene ID= ENSG00000162878.12 TPM= 96.66 Transcript Type= protein_coding
chr2	42169350	42332548	42169350	42332548	+	ENST00000318522.9@EML4	ENST00000318522.9	protein_coding	42169350,42245505,42256501,42261121,42263178,42264706,42280850,42282823,42284634,42286269,42288227,42295125,42295381,42301241,42303104,42303315,42304484,42315962,42317427,42325467,42326154,42328886,42329734	42169636,42245687,42256630,42261294,42263306,42264731,42280973,42282972,42284703,42286379,42288322,42295259,42295516,42301392,42303229,42303446,42304551,42316050,42317524,42325554,42326252,42329016,42332548	Gene ID= ENSG00000143924.18 TPM= 2.12 Transcript Type= protein_coding
chr2	42349338	42369010	42349338	42369010	-	ENST00000378669.5@COX7A2L	ENST00000378669.5	protein_coding	42368868,42361090,42353212,42349338	42369010,42361848,42353343,42351359	Gene ID= ENSG00000115944.14 TPM= 275.63 Transcript Type= protein_coding
chr2	42350507	42361216	42350507	42361216	-	ENST00000234301.2@COX7A2L	ENST00000234301.2	protein_coding	42361090,42353212,42350507	42361216,42353343,42351359	Gene ID= ENSG00000115944.14 TPM= 272.44 Transcript Type= protein_coding
chr2	42568716	42709211	42568716	42709211	+	transcript1539.chr2.nic@MTA3	transcript1539.chr2.nic	protein_coding	42568716,42570437,42579107,42609458,42640173,42644127,42656200,42659763,42682401,42695765,42697776,42698415,42704197,42707903,42708874	42568773,42570504,42579200,42609584,42640236,42644244,42656302,42659862,42682589,42695839,42697834,42698494,42704318,42708054,42709211	Gene ID= ENSG00000057935.13 TPM= 2.12 Transcript Type= NA
chr2	42568517	42709544	42568517	42709544	+	ENST00000407270.7@MTA3	ENST00000407270.7	protein_coding	42568517,42570437,42579107,42609458,42640173,42644127,42656200,42659763,42682401,42695765,42697776,42704194,42707903,42708874	42568773,42570504,42579200,42609584,42640236,42644244,42656302,42659862,42682589,42695839,42697834,42704318,42708054,42709544	Gene ID= ENSG00000057935.13 TPM= 14.87 Transcript Type= protein_coding
chr2	42568675	42709544	42568675	42709544	+	ENST00000406911.5@MTA3	ENST00000406911.5	protein_coding	42568675,42570437,42579107,42609458,42640173,42644127,42656200,42659763,42682401,42695765,42697776,42704197,42707903,42708874	42568773,42570504,42579200,42609584,42640236,42644244,42656302,42659862,42682589,42695839,42697834,42704318,42708054,42709544	Gene ID= ENSG00000057935.13 TPM= 2.12 Transcript Type= protein_coding
chr2	42568675	42709213	42568675	42709213	+	ENST00000454356.5@MTA3	ENST00000454356.5	protein_coding	42568675,42570437,42579107,42609458,42640173,42644127,42656200,42659763,42682401,42695765,42697776,42704197,42707911,42708874	42568773,42570504,42579200,42609584,42640236,42644244,42656302,42659862,42682589,42695839,42697834,42704318,42708054,42709213	Gene ID= ENSG00000057935.13 TPM= 18.06 Transcript Type= nonsense_mediated_decay
chr2	42763977	42765697	42763977	42765697	+	transcript1551.chr2.nnic@NA	transcript1551.chr2.nnic	NA	42763977	42765697	Gene ID= novel_gene_chr2_1552 TPM= 6.37 Transcript Type= NA
chr2	42767089	42792592	42767089	42792592	-	ENST00000294973.10@HAAO	ENST00000294973.10	protein_coding	42792457,42788529,42783784,42783314,42770493,42770143,42769713,42767860,42767595,42767089	42792592,42788607,42783867,42783420,42770582,42770186,42769858,42767928,42767677,42767515	Gene ID= ENSG00000162882.14 TPM= 1.06 Transcript Type= protein_coding
chr2	43222402	43226609	43222402	43226609	-	ENST00000282388.3@ZFP36L2	ENST00000282388.3	protein_coding	43226265,43222402	43226609,43225752	Gene ID= ENSG00000152518.7 TPM= 114.71 Transcript Type= protein_coding
chr2	43230851	43398136	43230851	43398136	-	transcript1565.chr2.nic@THADA	transcript1565.chr2.nic	protein_coding	43397971,43344122,43320446,43292834,43292104,43291696,43286908,43279765,43232713,43230851	43398136,43344237,43320540,43293213,43292222,43291768,43287061,43279896,43232882,43231343	Gene ID= ENSG00000115970.18 TPM= 4.25 Transcript Type= NA
chr2	43487669	43489892	43487669	43489892	+	transcript1566.chr2.nnic@NA	transcript1566.chr2.nnic	NA	43487669	43489892	Gene ID= novel_gene_chr2_1567 TPM= 3.19 Transcript Type= NA
chr2	43774013	43805555	43774013	43805555	+	transcript1572.chr2.nic@DYNC2LI1	transcript1572.chr2.nic	protein_coding	43774013,43776782,43783520,43787181,43789633,43794457,43795890,43796718,43800841,43801639,43804642,43805154	43774146,43776899,43783554,43787250,43789721,43794643,43795958,43796795,43800917,43801709,43804739,43805555	Gene ID= ENSG00000138036.18 TPM= 2.12 Transcript Type= NA
chr2	43774049	43795179	43774049	43795179	+	ENST00000406852.7@DYNC2LI1	ENST00000406852.7	protein_coding	43774049,43776782,43783520,43787181,43789633,43794457	43774146,43776899,43783554,43787250,43789721,43795179	Gene ID= ENSG00000138036.18 TPM= 2.12 Transcript Type= protein_coding
chr2	43886222	43886950	43886222	43886950	-	transcript1574.chr2.nnic@NA	transcript1574.chr2.nnic	NA	43886222	43886950	Gene ID= novel_gene_chr2_1575 TPM= 3.19 Transcript Type= NA
chr2	43886508	43996005	43886508	43996005	-	ENST00000260665.11@LRPPRC	ENST00000260665.11	protein_coding	43995799,43982238,43979826,43977155,43976994,43976143,43975091,43974614,43974150,43973795,43973607,43963588,43960541,43957385,43950573,43949602,43948412,43948122,43947731,43947257,43946113,43945332,43943687,43934754,43934190,43925893,43925067,43918256,43918025,43912432,43905692,43901320,43899466,43899219,43896634,43894545,43889734,43886508	43996005,43982434,43979948,43977276,43977052,43976229,43975217,43974758,43974295,43973900,43973714,43963706,43960634,43957451,43950600,43949659,43948518,43948199,43947775,43947370,43946243,43945417,43943894,43934878,43934296,43925961,43925157,43918398,43918133,43912558,43905780,43901524,43899605,43899334,43896708,43894629,43889876,43888656	Gene ID= ENSG00000138095.18 TPM= 27.62 Transcript Type= protein_coding
chr2	44168877	44231472	44168877	44231472	+	ENST00000282412.8@PPM1B	ENST00000282412.8	protein_coding	44168877,44201186,44209210,44217967,44218480,44230413	44169274,44202045,44209327,44218078,44218537,44231472	Gene ID= ENSG00000138032.20 TPM= 110.46 Transcript Type= protein_coding
chr2	44168910	44231472	44168910	44231472	+	ENST00000345249.8@PPM1B	ENST00000345249.8	protein_coding	44168910,44209210,44217967,44218480,44230413	44169274,44209327,44218078,44218537,44231472	Gene ID= ENSG00000138032.20 TPM= 3.19 Transcript Type= protein_coding
chr2	44318766	44361494	44318766	44361494	-	ENST00000409936.5@PREPL	ENST00000409936.5	protein_coding	44361380,44359497,44346268,44344520,44343745,44342417,44339147,44338351,44332459,44328937,44326712,44323262,44322731,44321827,44318766	44361494,44360038,44346390,44344586,44343951,44342552,44339363,44338536,44332656,44329112,44326928,44323411,44322854,44321900,44321445	Gene ID= ENSG00000138078.15 TPM= 1.06 Transcript Type= protein_coding
chr2	44318763	44361546	44318763	44361546	-	ENST00000409411.5@PREPL	ENST00000409411.5	protein_coding	44361380,44346268,44344520,44343745,44342417,44339147,44338351,44332459,44328937,44326712,44323262,44322731,44321827,44318763	44361546,44346390,44344586,44343951,44342552,44339363,44338536,44332656,44329112,44326928,44323411,44322854,44321900,44321445	Gene ID= ENSG00000138078.15 TPM= 6.37 Transcript Type= protein_coding
chr2	44318763	44361561	44318763	44361561	-	ENST00000409957.5@PREPL	ENST00000409957.5	protein_coding	44361417,44346268,44344520,44343745,44342417,44339147,44338351,44332459,44328937,44326712,44323262,44322731,44321827,44318763	44361561,44346390,44344586,44343951,44342552,44339363,44338536,44332656,44329112,44326928,44323411,44322854,44321900,44321445	Gene ID= ENSG00000138078.15 TPM= 1.06 Transcript Type= protein_coding
chr2	44317611	44361862	44317611	44361862	-	ENST00000541738.5@PREPL	ENST00000541738.5	protein_coding	44361524,44346268,44344520,44343745,44342417,44339147,44338351,44332459,44328937,44326712,44323262,44322731,44321827,44317611	44361862,44346390,44344586,44343951,44342552,44339363,44338536,44332656,44329112,44326928,44323411,44322854,44321900,44321445	Gene ID= ENSG00000138078.15 TPM= 5.31 Transcript Type= protein_coding
chr2	44316281	44360674	44316281	44360674	-	ENST00000425263.5@PREPL	ENST00000425263.5	protein_coding	44359497,44346268,44344520,44343745,44342417,44339147,44338351,44332459,44328937,44326712,44323262,44322731,44321827,44319006,44316281	44360674,44346390,44344586,44343951,44342552,44339363,44338536,44332656,44329112,44326928,44323411,44322854,44321900,44321445,44316444	Gene ID= ENSG00000138078.15 TPM= 1.06 Transcript Type= nonsense_mediated_decay
chr2	44320922	44361806	44320922	44361806	-	ENST00000410081.5@PREPL	ENST00000410081.5	protein_coding	44361380,44359497,44346268,44344520,44343745,44342417,44339147,44338351,44332459,44328937,44326712,44323262,44322731,44321827,44320922	44361806,44359750,44346390,44344586,44343951,44342552,44339363,44338536,44332656,44329112,44326928,44323411,44322854,44321900,44321445	Gene ID= ENSG00000138078.15 TPM= 1.06 Transcript Type= protein_coding
chr2	44361964	44772592	44361964	44772592	+	ENST00000378494.7@CAMKMT	ENST00000378494.7	protein_coding	44361964,44372716,44390241,44704283,44706287,44707399,44715287,44743622,44754055,44766430,44772036	44362145,44372888,44390305,44704343,44706341,44707462,44715353,44743696,44754118,44766561,44772592	Gene ID= ENSG00000143919.14 TPM= 2.12 Transcript Type= protein_coding
chr2	45005161	45009430	45005161	45009430	-	ENST00000303077.6@SIX2	ENST00000303077.6	protein_coding	45008551,45005161	45009430,45006485	Gene ID= ENSG00000170577.7 TPM= 1.06 Transcript Type= protein_coding
chr2	45388680	45611281	45388680	45611281	-	ENST00000263736.4@SRBD1	ENST00000263736.4	protein_coding	45611219,45605362,45601903,45599449,45585608,45581693,45579875,45574627,45573207,45562653,45553623,45551125,45547522,45546732,45488240,45476993,45419788,45418365,45413114,45392945,45388680	45611281,45605441,45602083,45599835,45585774,45581810,45580013,45574723,45573342,45562756,45553730,45551282,45547612,45546839,45488331,45477075,45419894,45418541,45413293,45393129,45389599	Gene ID= ENSG00000068784.12 TPM= 12.75 Transcript Type= protein_coding
chr2	45648728	45651074	45648728	45651074	-	transcript1622.chr2.nnic@NA	transcript1622.chr2.nnic	NA	45648728	45651074	Gene ID= novel_gene_chr2_1623 TPM= 2.12 Transcript Type= NA
chr2	45893355	45895016	45893355	45895016	-	transcript1628.chr2.nnic@NA	transcript1628.chr2.nnic	NA	45893355	45895016	Gene ID= novel_gene_chr2_1629 TPM= 4.25 Transcript Type= NA
chr2	46297402	46386703	46297402	46386703	+	ENST00000263734.4@EPAS1	ENST00000263734.4	protein_coding	46297402,46346873,46356151,46356724,46360638,46360885,46369827,46375690,46376539,46377894,46378657,46380227,46381596,46381975,46382425,46384509	46297937,46347063,46356302,46356808,46360756,46361090,46369933,46375837,46376753,46378087,46378767,46380717,46381722,46382089,46382598,46386703	Gene ID= ENSG00000116016.13 TPM= 81.79 Transcript Type= protein_coding
chr2	46298419	46301837	46298419	46301837	+	transcript1631.chr2.nnic@NA	transcript1631.chr2.nnic	NA	46298419	46301837	Gene ID= novel_gene_chr2_1632 TPM= 2.12 Transcript Type= NA
chr2	46542728	46583121	46542728	46583121	+	ENST00000238738.8@RHOQ	ENST00000238738.8	protein_coding	46542728,46543754,46576087,46576561,46580928	46543188,46543812,46576251,46576656,46583121	Gene ID= ENSG00000119729.11 TPM= 210.31 Transcript Type= protein_coding
chr2	46553586	46556073	46553586	46556073	-	transcript1673.chr2.nnic@NA	transcript1673.chr2.nnic	NA	46553586	46556073	Gene ID= novel_gene_chr2_1674 TPM= 3.19 Transcript Type= NA
chr2	46581285	46617057	46581285	46617057	-	transcript1635.chr2.nic@PIGF	transcript1635.chr2.nic	protein_coding	46616970,46614937,46613694,46612228,46592475,46591803,46581285	46617057,46615185,46613785,46612344,46592583,46591925,46581591	Gene ID= ENSG00000151665.12 TPM= 2.47 Transcript Type= NA
chr2	46580937	46617119	46580937	46617119	-	ENST00000281382.10@PIGF	ENST00000281382.10	protein_coding	46616970,46614937,46613694,46612228,46592475,46580937	46617119,46615185,46613785,46612344,46592583,46581591	Gene ID= ENSG00000151665.12 TPM= 9.91 Transcript Type= protein_coding
chr2	46581285	46617051	46581285	46617051	-	ENST00000306465.8@PIGF	ENST00000306465.8	protein_coding	46616970,46614937,46613694,46612228,46592475,46588075,46581285	46617051,46615185,46613785,46612344,46592583,46588179,46581591	Gene ID= ENSG00000151665.12 TPM= 1.41 Transcript Type= protein_coding
chr2	46617151	46625742	46617151	46625742	+	ENST00000238892.3@CRIPT	ENST00000238892.3	protein_coding	46617151,46618773,46619627,46623764,46624163	46617298,46618838,46619681,46623867,46625742	Gene ID= ENSG00000119878.5 TPM= 8.5 Transcript Type= protein_coding
chr2	46699187	46762313	46699187	46762313	+	ENST00000394861.2@SOCS5	ENST00000394861.2	protein_coding	46699187,46758519	46699449,46762313	Gene ID= ENSG00000171150.7 TPM= 8.5 Transcript Type= protein_coding
chr2	46727146	46728874	46727146	46728874	-	transcript1688.chr2.nnic@NA	transcript1688.chr2.nnic	NA	46727146	46728874	Gene ID= novel_gene_chr2_1689 TPM= 4.25 Transcript Type= NA
chr2	46746924	46750746	46746924	46750746	-	transcript1690.chr2.nnic@NA	transcript1690.chr2.nnic	NA	46746924	46750746	Gene ID= novel_gene_chr2_1691 TPM= 5.31 Transcript Type= NA
chr2	46901874	46915868	46901874	46915868	-	ENST00000319466.8@MCFD2	ENST00000319466.8	protein_coding	46915723,46909023,46907810,46901874	46915868,46909177,46907969,46905594	Gene ID= ENSG00000180398.11 TPM= 31.51 Transcript Type= protein_coding
chr2	46901874	46916054	46901874	46916054	-	ENST00000409800.5@MCFD2	ENST00000409800.5	protein_coding	46915981,46907810,46901874	46916054,46907969,46905594	Gene ID= ENSG00000180398.11 TPM= 4.96 Transcript Type= protein_coding
chr2	46901874	46915816	46901874	46915816	-	ENST00000409913.5@MCFD2	ENST00000409913.5	protein_coding	46915723,46907810,46901874	46915816,46907969,46905594	Gene ID= ENSG00000180398.11 TPM= 40.01 Transcript Type= protein_coding
chr2	46940874	46951323	46940874	46951323	+	transcript1701.chr2.nic@TTC7A	transcript1701.chr2.nic	protein_coding	46940874,46950363	46941725,46951323	Gene ID= ENSG00000068724.15 TPM= 3.19 Transcript Type= NA
chr2	47160082	47176601	47160082	47176601	-	ENST00000272298.11@CALM2	ENST00000272298.11	protein_coding	47176441,47170734,47162519,47162286,47161723,47160082	47176601,47170764,47162662,47162392,47161858,47160804	Gene ID= ENSG00000143933.16 TPM= 42.49 Transcript Type= protein_coding
chr2	47175083	47176516	47175083	47176516	-	transcript1714.chr2.nnic@NA	transcript1714.chr2.nnic	NA	47175083	47176516	Gene ID= novel_gene_chr2_1715 TPM= 19.12 Transcript Type= NA
chr2	47335315	47335514	47335315	47335514	+	ENST00000418539.2@BCYRN1	ENST00000418539.2	scRNA	47335315	47335514	Gene ID= ENSG00000236824.2 TPM= 658.54 Transcript Type= scRNA
chr2	47402969	47483228	47402969	47483228	+	ENST00000233146.6@MSH2	ENST00000233146.6	protein_coding	47402969,47408401,47410094,47412414,47414269,47416296,47429742,47445548,47463031,47466658,47470965,47475025,47476367,47478272,47480696,47482779	47403402,47408555,47410372,47412560,47414418,47416429,47429941,47445657,47463154,47466808,47471062,47475270,47476571,47478519,47480871,47483228	Gene ID= ENSG00000095002.13 TPM= 22.31 Transcript Type= protein_coding
chr2	47516581	47570939	47516581	47570939	-	ENST00000327876.4@KCNK12	ENST00000327876.4	protein_coding	47569941,47516581	47570939,47521808	Gene ID= ENSG00000184261.4 TPM= 2.12 Transcript Type= protein_coding
chr2	47783126	47806952	47783126	47806952	+	transcript1726.chr2.nic@MSH6	transcript1726.chr2.nic	protein_coding	47783126,47790927,47795894,47798611,47803420,47803630,47804910,47805618,47806204,47806347,47806452,47806779	47783493,47791123,47796063,47801155,47803628,47803685,47805027,47805707,47806345,47806358,47806651,47806952	Gene ID= ENSG00000116062.14 TPM= 9.56 Transcript Type= NA
chr2	47783082	47806952	47783082	47806952	+	ENST00000622629.4@MSH6	ENST00000622629.4	protein_coding	47783082,47790927,47795894,47798611,47803420,47803630,47804902,47805618,47806204,47806310,47806347,47806452,47806779	47783493,47791123,47796063,47801155,47803628,47803678,47805027,47805707,47806307,47806345,47806358,47806651,47806952	Gene ID= ENSG00000116062.14 TPM= 9.56 Transcript Type= protein_coding
chr2	47907732	47908165	47907732	47908165	+	transcript1729.chr2.nnic@NA	transcript1729.chr2.nnic	NA	47907732	47908165	Gene ID= novel_gene_chr2_1730 TPM= 2.12 Transcript Type= NA
chr2	48440043	48440597	48440043	48440597	-	ENST00000609028.1@AC093635.1	ENST00000609028.1	lincRNA	48440043	48440597	Gene ID= ENSG00000272663.1 TPM= 1.06 Transcript Type= lincRNA
chr2	48440797	48515386	48440797	48515386	+	ENST00000294952.12@PPP1R21	ENST00000294952.12	protein_coding	48440797,48451008,48454595,48458126,48459754,48460095,48461138,48464937,48465493,48471087,48471279,48474683,48479924,48486631,48491018,48495679,48498493,48505564,48507269,48510015,48511340,48514715	48441010,48451076,48454741,48458227,48459918,48460153,48461232,48464989,48465642,48471188,48471367,48474819,48480016,48486758,48491170,48495771,48498735,48505596,48507385,48510113,48511468,48515386	Gene ID= ENSG00000162869.15 TPM= 9.56 Transcript Type= protein_coding
chr2	48530171	48598512	48530171	48598512	+	ENST00000404752.5@STON1	ENST00000404752.5	protein_coding	48530171,48580587,48591653,48595228	48530216,48582563,48591855,48598512	Gene ID= ENSG00000243244.5 TPM= 5.31 Transcript Type= protein_coding
chr2	49581775	49595122	49581775	49595122	+	transcript1748.chr2.nnic@AC009971.1	transcript1748.chr2.nnic	lincRNA	49581775,49592988,49594624	49581931,49593089,49595122	Gene ID= ENSG00000282828.1 TPM= 2.12 Transcript Type= NA
chr2	49581777	49659109	49581777	49659109	+	transcript1749.chr2.nnic@AC009971.1	transcript1749.chr2.nnic	lincRNA	49581777,49652085,49657490	49581931,49652225,49659109	Gene ID= ENSG00000282828.1 TPM= 3.19 Transcript Type= NA
chr2	49921238	49974203	49921238	49974203	-	ENST00000378262.7@NRXN1	ENST00000378262.7	protein_coding	49973968,49943704,49921238	49974203,49943791,49922251	Gene ID= ENSG00000179915.22 TPM= 1.06 Transcript Type= protein_coding
chr2	53669981	53786942	53669981	53786942	-	ENST00000263634.7@ASB3	ENST00000263634.7	protein_coding	53786821,53765377,53750783,53729458,53728712,53716566,53714384,53700271,53693884,53669981	53786942,53765585,53750941,53729570,53728847,53716743,53714581,53700528,53694014,53670690	Gene ID= ENSG00000115239.21 TPM= 5.31 Transcript Type= protein_coding
chr2	53767792	53775196	53767792	53775196	+	ENST00000295304.4@CHAC2	ENST00000295304.4	protein_coding	53767792,53771907,53774142	53768021,53771942,53775196	Gene ID= ENSG00000143942.4 TPM= 4.25 Transcript Type= protein_coding
chr2	53787024	53797795	53787024	53797795	+	transcript1779.chr2.nic@ERLEC1	transcript1779.chr2.nic	protein_coding	53787024,53794345,53795933,53797515,53797732	53787372,53794449,53796013,53797592,53797795	Gene ID= ENSG00000068912.13 TPM= 3.19 Transcript Type= NA
chr2	53787080	53818819	53787080	53818819	+	ENST00000378239.5@ERLEC1	ENST00000378239.5	protein_coding	53787080,53794345,53795933,53797515,53797732,53799047,53801397,53801713,53809214,53812949,53814543,53814860,53817898	53787372,53794449,53796013,53797592,53797795,53799081,53801620,53801842,53809273,53813073,53814620,53814935,53818819	Gene ID= ENSG00000068912.13 TPM= 19.12 Transcript Type= protein_coding
chr2	53787080	53818819	53787080	53818819	+	ENST00000185150.8@ERLEC1	ENST00000185150.8	protein_coding	53787080,53794345,53795933,53797515,53797732,53799047,53801397,53801713,53808299,53809214,53812949,53814543,53814860,53817898	53787372,53794449,53796013,53797592,53797795,53799081,53801620,53801842,53808460,53809273,53813073,53814620,53814935,53818819	Gene ID= ENSG00000068912.13 TPM= 82.85 Transcript Type= protein_coding
chr2	53818807	53819879	53818807	53819879	-	transcript1808.chr2.nnic@NA	transcript1808.chr2.nnic	NA	53818807	53819879	Gene ID= novel_gene_chr2_1809 TPM= 2.12 Transcript Type= NA
chr2	53971078	54305144	53971078	54305144	+	transcript1784.chr2.nnic@ACYP2	transcript1784.chr2.nnic	protein_coding	53971078,53973713,54135453,54138639,54304688	53971321,53973810,54135469,54138748,54305144	Gene ID= ENSG00000170634.12 TPM= 44.96 Transcript Type= NA
chr2	54123141	54305144	54123141	54305144	+	transcript1789.chr2.nnic@ACYP2	transcript1789.chr2.nnic	protein_coding	54123141,54135453,54138639,54222997,54304688	54123410,54135469,54138748,54223083,54305144	Gene ID= ENSG00000170634.12 TPM= 47.09 Transcript Type= NA
chr2	54123141	54305144	54123141	54305144	+	transcript1796.chr2.nnic@ACYP2	transcript1796.chr2.nnic	protein_coding	54123141,54135453,54138639,54304688	54123410,54135469,54138748,54305144	Gene ID= ENSG00000170634.12 TPM= 63.02 Transcript Type= NA
chr2	53970838	53975376	53970838	53975376	+	ENST00000606082.5@ACYP2	ENST00000606082.5	protein_coding	53970838,53973713,53975246	53971321,53973810,53975376	Gene ID= ENSG00000170634.12 TPM= 1.06 Transcript Type= protein_coding
chr2	53971108	54066047	53971108	54066047	+	ENST00000422521.2@ACYP2	ENST00000422521.2	protein_coding	53971108,53973713,54050958,54057239,54065460	53971321,53973810,54051050,54057360,54066047	Gene ID= ENSG00000170634.12 TPM= 2.12 Transcript Type= protein_coding
chr2	53971096	53973757	53971096	53973757	+	transcript1804.chr2.nnic@NA	transcript1804.chr2.nnic	NA	53971096	53973757	Gene ID= novel_gene_chr2_1805 TPM= 3.19 Transcript Type= NA
chr2	54558394	54662308	54558394	54662308	+	ENST00000333896.5@SPTBN1	ENST00000333896.5	protein_coding	54558394,54599092,54612161,54616207,54617608,54618078,54621400,54622300,54623479,54624804,54625932,54628097,54628933,54629892,54630855,54632566,54637713,54642983,54644323,54645229,54645928,54646194,54647131,54648986,54649615,54653609,54655070,54655914,54657850,54659154,54659936	54558887,54599243,54612334,54616298,54617688,54618193,54621512,54622487,54623596,54624962,54626234,54628250,54629803,54630029,54631611,54632768,54637803,54643129,54644586,54645453,54646017,54646475,54647261,54649190,54649989,54653853,54655208,54655998,54658046,54659266,54662308	Gene ID= ENSG00000115306.15 TPM= 17.46 Transcript Type= protein_coding
chr2	54456268	54528715	54456268	54528715	+	transcript1844.chr2.nic@SPTBN1	transcript1844.chr2.nic	protein_coding	54456268,54526372	54456518,54528715	Gene ID= ENSG00000115306.15 TPM= 6.37 Transcript Type= NA
chr2	54456285	54669675	54456285	54669675	+	ENST00000356805.8@SPTBN1	ENST00000356805.8	protein_coding	54456285,54526372,54599092,54612161,54616207,54617608,54618078,54621400,54622300,54623479,54624804,54625932,54628097,54628933,54629892,54630855,54632566,54637713,54642983,54644323,54645229,54645928,54646194,54647131,54648986,54649615,54653609,54655070,54655914,54657850,54659154,54659936,54664453,54665915,54667604,54668351	54456518,54526566,54599243,54612334,54616298,54617688,54618193,54621512,54622487,54623596,54624962,54626234,54628250,54629803,54630029,54631611,54632768,54637803,54643129,54644586,54645453,54646017,54646475,54647261,54649190,54649989,54653853,54655208,54655998,54658046,54659266,54659999,54664691,54666088,54667646,54669675	Gene ID= ENSG00000115306.15 TPM= 114.65 Transcript Type= protein_coding
chr2	54530355	54534865	54530355	54534865	-	transcript1853.chr2.nnic@NA	transcript1853.chr2.nnic	NA	54530355	54534865	Gene ID= novel_gene_chr2_1854 TPM= 22.31 Transcript Type= NA
chr2	54555051	54555579	54555051	54555579	-	transcript1851.chr2.nnic@NA	transcript1851.chr2.nnic	NA	54555051	54555579	Gene ID= novel_gene_chr2_1852 TPM= 3.19 Transcript Type= NA
chr2	54562529	54564450	54562529	54564450	-	transcript1857.chr2.nnic@NA	transcript1857.chr2.nnic	NA	54562529	54564450	Gene ID= novel_gene_chr2_1858 TPM= 2.12 Transcript Type= NA
chr2	54576057	54578130	54576057	54578130	-	transcript1849.chr2.nnic@NA	transcript1849.chr2.nnic	NA	54576057	54578130	Gene ID= novel_gene_chr2_1850 TPM= 4.25 Transcript Type= NA
chr2	54594835	54596457	54594835	54596457	-	transcript1859.chr2.nnic@NA	transcript1859.chr2.nnic	NA	54594835	54596457	Gene ID= novel_gene_chr2_1860 TPM= 2.12 Transcript Type= NA
chr2	54972189	55050544	54972189	55050544	-	ENST00000317610.11@RTN4	ENST00000317610.11	protein_coding	55049745,54987491,54982515,54974695,54973821,54973563,54972189	55050544,54987698,54982653,54974764,54973867,54973621,54973198	Gene ID= ENSG00000115310.17 TPM= 16.81 Transcript Type= protein_coding
chr2	55026610	55050554	55026610	55050554	-	transcript1872.chr2.nic@RTN4	transcript1872.chr2.nic	protein_coding	55049745,55028164,55026610	55050554,55028220,55027485	Gene ID= ENSG00000115310.17 TPM= 46.74 Transcript Type= NA
chr2	54972189	55050544	54972189	55050544	-	ENST00000337526.10@RTN4	ENST00000337526.10	protein_coding	55049745,55028164,55025086,54987491,54982515,54974695,54973821,54973563,54972189	55050544,55028220,55027485,54987698,54982653,54974764,54973867,54973621,54973198	Gene ID= ENSG00000115310.17 TPM= 19.47 Transcript Type= protein_coding
chr2	54972189	55050544	54972189	55050544	-	ENST00000357732.8@RTN4	ENST00000357732.8	protein_coding	55049745,55028164,54987491,54982515,54974695,54973821,54973563,54972189	55050544,55028220,54987698,54982653,54974764,54973867,54973621,54973198	Gene ID= ENSG00000115310.17 TPM= 16.81 Transcript Type= protein_coding
chr2	55232678	55235755	55232678	55235755	+	ENST00000404735.1@RPS27A	ENST00000404735.1	protein_coding	55232678,55233363,55234119,55234831,55235428	55232872,55233417,55234204,55234962,55235755	Gene ID= ENSG00000143947.13 TPM= 2.12 Transcript Type= protein_coding
chr2	55231903	55235588	55231903	55235588	+	ENST00000402285.7@RPS27A	ENST00000402285.7	protein_coding	55231903,55232808,55233363,55234119,55234831,55235428	55232108,55232872,55233417,55234204,55234962,55235588	Gene ID= ENSG00000143947.13 TPM= 45.67 Transcript Type= protein_coding
chr2	55236620	55269262	55236620	55269262	-	transcript1879.chr2.nic@MTIF2	transcript1879.chr2.nic	protein_coding	55269169,55268578,55267569,55266381,55263640,55262316,55254654,55254041,55252477,55249395,55246337,55244029,55243416,55242940,55240011,55237288,55236620	55269262,55268739,55267635,55266518,55263865,55262427,55254825,55254201,55252653,55249534,55246461,55244233,55243668,55243080,55240175,55237428,55236820	Gene ID= ENSG00000085760.14 TPM= 8.07 Transcript Type= NA
chr2	55236620	55269219	55236620	55269219	-	transcript1880.chr2.nic@MTIF2	transcript1880.chr2.nic	protein_coding	55268817,55268578,55267569,55263640,55262316,55254654,55254041,55252477,55249395,55246337,55244029,55243416,55242940,55240011,55237288,55236620	55269219,55268739,55267635,55263865,55262427,55254825,55254201,55252653,55249534,55246461,55244233,55243668,55243080,55240175,55237428,55236820	Gene ID= ENSG00000085760.14 TPM= 2.76 Transcript Type= NA
chr2	55236620	55269262	55236620	55269262	-	transcript1882.chr2.nnic@MTIF2	transcript1882.chr2.nnic	protein_coding	55269169,55268650,55267569,55263640,55262316,55254654,55254041,55252477,55249395,55246337,55244029,55243416,55242940,55240011,55237288,55236620	55269262,55268739,55267635,55263865,55262427,55254825,55254201,55252653,55249534,55246461,55244233,55243668,55243080,55240175,55237428,55236820	Gene ID= ENSG00000085760.14 TPM= 2.76 Transcript Type= NA
chr2	55236620	55269248	55236620	55269248	-	ENST00000263629.8@MTIF2	ENST00000263629.8	protein_coding	55269169,55268578,55267569,55263640,55262316,55254654,55254041,55252477,55249395,55246337,55244029,55243416,55242940,55240011,55237288,55236620	55269248,55268739,55267635,55263865,55262427,55254825,55254201,55252653,55249534,55246461,55244233,55243668,55243080,55240175,55237428,55236820	Gene ID= ENSG00000085760.14 TPM= 16.57 Transcript Type= protein_coding
chr2	55236595	55269243	55236595	55269243	-	ENST00000403721.5@MTIF2	ENST00000403721.5	protein_coding	55269169,55267569,55263640,55262316,55254654,55254041,55252477,55249395,55246337,55244029,55243416,55242940,55240011,55237288,55236595	55269243,55267635,55263865,55262427,55254825,55254201,55252653,55249534,55246461,55244233,55243668,55243080,55240175,55237428,55236820	Gene ID= ENSG00000085760.14 TPM= 1.7 Transcript Type= protein_coding
chr2	55334819	55419944	55334819	55419944	-	transcript1905.chr2.nic@CCDC88A	transcript1905.chr2.nic	protein_coding	55419017,55418816,55388778,55374814,55372452,55363950,55362308,55355579,55349518,55346175,55344368,55343648,55339464,55336681,55334819	55419944,55418916,55388886,55374883,55372510,55364033,55362448,55355751,55349599,55346333,55344514,55343792,55339648,55336818,55335164	Gene ID= ENSG00000115355.15 TPM= 6.37 Transcript Type= NA
chr2	55548379	55617637	55548379	55617637	-	transcript1917.chr2.nnic@PPP4R3B	transcript1917.chr2.nnic	protein_coding	55617144,55615451,55603978,55598416,55588879,55586618,55585051,55581567,55579679,55577315,55573619,55568194,55564902,55564313,55558775,55548379	55617637,55615506,55604076,55599039,55588956,55586734,55585167,55581698,55579781,55577356,55573777,55568363,55565041,55564476,55558968,55550006	Gene ID= ENSG00000275052.4 TPM= 2.12 Transcript Type= NA
chr2	55564314	55617637	55564314	55617637	-	transcript1923.chr2.nic@PPP4R3B	transcript1923.chr2.nic	protein_coding	55617144,55615451,55603978,55598416,55588879,55586618,55585051,55581567,55579679,55577315,55573619,55568194,55564902,55564314	55617637,55615506,55604076,55599039,55588956,55586734,55585167,55581698,55579781,55577356,55573777,55568363,55565041,55564497	Gene ID= ENSG00000275052.4 TPM= 2.12 Transcript Type= NA
chr2	55580917	55617637	55580917	55617637	-	transcript1926.chr2.nic@PPP4R3B	transcript1926.chr2.nic	protein_coding	55617144,55615451,55603978,55598416,55588879,55586618,55585051,55580917	55617637,55615506,55604076,55599039,55588956,55586734,55585167,55581698	Gene ID= ENSG00000275052.4 TPM= 2.12 Transcript Type= NA
chr2	55613997	55617637	55613997	55617637	-	transcript1929.chr2.nic@PPP4R3B	transcript1929.chr2.nic	protein_coding	55617144,55613997	55617637,55615506	Gene ID= ENSG00000275052.4 TPM= 8.5 Transcript Type= NA
chr2	55614176	55618880	55614176	55618880	-	ENST00000612688.1@PPP4R3B	ENST00000612688.1	protein_coding	55618066,55617144,55614176	55618880,55617978,55615506	Gene ID= ENSG00000275052.4 TPM= 1.06 Transcript Type= processed_transcript
chr2	55548378	55617608	55548378	55617608	-	ENST00000616288.4@PPP4R3B	ENST00000616288.4	protein_coding	55617144,55615451,55603978,55598416,55588879,55586618,55585051,55581567,55579679,55577315,55573619,55568194,55564902,55564313,55558775,55548378	55617608,55615506,55604076,55599039,55588956,55586734,55585167,55581698,55579781,55577356,55573777,55568363,55565041,55564497,55558968,55550006	Gene ID= ENSG00000275052.4 TPM= 8.5 Transcript Type= protein_coding
chr2	55548379	55617588	55548379	55617588	-	ENST00000616407.1@PPP4R3B	ENST00000616407.1	protein_coding	55617144,55615451,55603978,55598416,55588879,55586618,55585051,55581567,55579679,55578247,55577315,55573619,55568194,55564902,55564313,55558775,55548379	55617588,55615506,55604076,55599039,55588956,55586734,55585167,55581698,55579781,55578342,55577356,55573777,55568363,55565041,55564497,55558968,55550006	Gene ID= ENSG00000275052.4 TPM= 6.37 Transcript Type= protein_coding
chr2	55617909	55618373	55617909	55618373	+	ENST00000608113.1@AC015982.1	ENST00000608113.1	antisense_RNA	55617909	55618373	Gene ID= ENSG00000272606.1 TPM= 2.12 Transcript Type= antisense_RNA
chr2	55635983	55693840	55635983	55693840	-	transcript1941.chr2.nic@PNPT1	transcript1941.chr2.nic	protein_coding	55693663,55687645,55686370,55684943,55683785,55680855,55680712,55679682,55672893,55671995,55671319,55667862,55666991,55661956,55660157,55656305,55656131,55654900,55647347,55646415,55646259,55644637,55643319,55643158,55640627,55637552,55635983	55693840,55687705,55686444,55685048,55683834,55680918,55680759,55679795,55673079,55672046,55671376,55667958,55667093,55662026,55660193,55656371,55656220,55654953,55647453,55646486,55646322,55645432,55643425,55643213,55640705,55637599,55636392	Gene ID= ENSG00000138035.14 TPM= 5.31 Transcript Type= NA
chr2	55865967	55924139	55865967	55924139	-	ENST00000394555.6@EFEMP1	ENST00000394555.6	protein_coding	55923711,55922360,55918219,55917665,55881612,55877746,55876623,55874946,55871000,55870720,55865967	55924139,55922447,55918267,55918051,55881734,55877865,55876742,55875065,55871123,55870915,55867234	Gene ID= ENSG00000115380.19 TPM= 6.37 Transcript Type= protein_coding
chr2	56184003	56207062	56184003	56207062	+	transcript1956.chr2.nnic@CCDC85A	transcript1956.chr2.nnic	protein_coding	56184003,56192477,56206388,56206864	56184900,56193440,56206451,56207062	Gene ID= ENSG00000055813.5 TPM= 2.66 Transcript Type= NA
chr2	56184003	56386171	56184003	56386171	+	transcript1958.chr2.nic@CCDC85A	transcript1958.chr2.nic	protein_coding	56184003,56192477,56342879,56384266	56184900,56193440,56342955,56386171	Gene ID= ENSG00000055813.5 TPM= 6.9 Transcript Type= NA
chr2	56215579	56218722	56215579	56218722	-	transcript1961.chr2.nnic@NA	transcript1961.chr2.nnic	NA	56215579	56218722	Gene ID= novel_gene_chr2_1962 TPM= 3.19 Transcript Type= NA
chr2	58046644	58159871	58046644	58159871	+	transcript1963.chr2.nic@VRK2	transcript1963.chr2.nic	protein_coding	58046644,58048827,58084089,58084881,58086339,58088341,58089631,58123101,58131808,58135141,58139666,58146316,58154754,58159349	58046821,58048967,58084138,58084950,58086426,58088446,58089723,58123233,58131928,58135199,58139832,58146474,58154802,58159871	Gene ID= ENSG00000028116.16 TPM= 4.78 Transcript Type= NA
chr2	58046799	58159871	58046799	58159871	+	transcript1966.chr2.nic@VRK2	transcript1966.chr2.nic	protein_coding	58046799,58048827,58084089,58084881,58086339,58088341,58089631,58123101,58131808,58135141,58139666,58146316,58154754,58159349	58046868,58048967,58084138,58084950,58086426,58088446,58089723,58123233,58131928,58135199,58139832,58146474,58154802,58159871	Gene ID= ENSG00000028116.16 TPM= 4.25 Transcript Type= NA
chr2	58159247	58241350	58159247	58241350	-	ENST00000233741.8@FANCL	ENST00000233741.8	protein_coding	58241218,58232054,58229814,58226728,58221942,58204130,58198594,58165724,58163434,58163029,58162866,58161522,58160108,58159247	58241350,58232112,58229874,58226784,58222042,58204226,58198662,58165874,58163517,58163074,58162947,58161638,58160179,58159800	Gene ID= ENSG00000115392.11 TPM= 9.03 Transcript Type= protein_coding
chr2	58159247	58241350	58159247	58241350	-	ENST00000402135.7@FANCL	ENST00000402135.7	protein_coding	58241218,58232054,58229814,58226728,58221942,58204130,58198579,58165724,58163434,58163029,58162866,58161522,58160108,58159247	58241350,58232112,58229874,58226784,58222042,58204226,58198662,58165874,58163517,58163074,58162947,58161638,58160179,58159800	Gene ID= ENSG00000115392.11 TPM= 1.59 Transcript Type= protein_coding
chr2	60451167	60553567	60451167	60553567	-	ENST00000359629.9@BCL11A	ENST00000359629.9	protein_coding	60553216,60545971,60468732,60462282,60451167	60553567,60546300,60468833,60462424,60452666	Gene ID= ENSG00000119866.20 TPM= 90.28 Transcript Type= protein_coding
chr2	60457198	60553498	60457198	60553498	-	ENST00000335712.10@BCL11A	ENST00000335712.10	protein_coding	60553216,60545971,60468732,60457198	60553498,60546300,60468833,60462424	Gene ID= ENSG00000119866.20 TPM= 7.44 Transcript Type= protein_coding
chr2	61009848	61017193	61009848	61017193	-	ENST00000398658.2@PUS10	ENST00000398658.2	protein_coding	61017149,61011765,61009848	61017193,61011905,61010888	Gene ID= ENSG00000162927.13 TPM= 1.06 Transcript Type= protein_coding
chr2	61017743	61051990	61017743	61051990	+	transcript1994.chr2.nnic@PEX13	transcript1994.chr2.nnic	protein_coding	61017743,61031419,61045726,61048472,61050906	61017851,61032113,61045851,61049493,61051990	Gene ID= ENSG00000162928.8 TPM= 3.19 Transcript Type= NA
chr2	61017225	61019067	61017225	61019067	+	ENST00000444100.2@PEX13	ENST00000444100.2	protein_coding	61017225,61018162	61017851,61019067	Gene ID= ENSG00000162928.8 TPM= 1.06 Transcript Type= protein_coding
chr2	61017562	61019081	61017562	61019081	+	ENST00000401576.1@PEX13	ENST00000401576.1	protein_coding	61017562,61017696,61018184	61017615,61017851,61019081	Gene ID= ENSG00000162928.8 TPM= 4.25 Transcript Type= protein_coding
chr2	61049674	61051860	61049674	61051860	+	transcript2006.chr2.nnic@NA	transcript2006.chr2.nnic	NA	61049674	61051860	Gene ID= novel_gene_chr2_2007 TPM= 2.12 Transcript Type= NA
chr2	61065880	61124277	61065880	61124277	+	ENST00000453186.5@KIAA1841	ENST00000453186.5	protein_coding	61065880,61068849,61070342,61071606,61076920,61081452,61083154,61088159,61088358,61092464,61097700,61103853,61106563,61108317,61109197,61115979,61117357,61117467,61118028,61121185,61122126	61066027,61068985,61070500,61071792,61077158,61081510,61083314,61088245,61088468,61092587,61097852,61103998,61106662,61108349,61109296,61116070,61117385,61117540,61118116,61121276,61124277	Gene ID= ENSG00000162929.13 TPM= 1.06 Transcript Type= nonsense_mediated_decay
chr2	61065898	61089670	61065898	61089670	+	transcript2014.chr2.nic@KIAA1841	transcript2014.chr2.nic	protein_coding	61065898,61068849,61070342,61071606,61073458,61076920,61081452,61083154,61088159,61088358	61066027,61068985,61070500,61071792,61073551,61077158,61081510,61083314,61088245,61089670	Gene ID= ENSG00000162929.13 TPM= 3.19 Transcript Type= NA
chr2	61065933	61124280	61065933	61124280	+	ENST00000402291.5@KIAA1841	ENST00000402291.5	protein_coding	61065933,61068849,61070342,61071606,61073458,61076920,61081452,61083154,61088159,61088358,61092464,61097700,61103853,61106563,61108317,61109197,61115979,61117357,61117467,61118028,61121185,61122126	61066027,61068985,61070500,61071792,61073551,61077158,61081510,61083314,61088245,61088468,61092587,61097852,61103998,61106662,61108349,61109296,61116070,61117385,61117540,61118116,61121276,61124280	Gene ID= ENSG00000162929.13 TPM= 4.25 Transcript Type= protein_coding
chr2	61118830	61121124	61118830	61121124	+	transcript2022.chr2.nnic@NA	transcript2022.chr2.nnic	NA	61118830	61121124	Gene ID= novel_gene_chr2_2023 TPM= 2.12 Transcript Type= NA
chr2	61141592	61144950	61141592	61144950	-	ENST00000420918.3@AC016747.1	ENST00000420918.3	processed_transcript	61144773,61141592	61144950,61143945	Gene ID= ENSG00000212978.6 TPM= 9.56 Transcript Type= lincRNA
chr2	61145102	61164829	61145102	61164829	+	transcript2025.chr2.nic@C2orf74	transcript2025.chr2.nic	protein_coding	61145102,61157862,61162842,61163052,61164354	61145196,61158012,61162955,61163232,61164829	Gene ID= ENSG00000237651.6 TPM= 4.25 Transcript Type= NA
chr2	61145109	61164658	61145109	61164658	+	transcript2026.chr2.nnic@C2orf74	transcript2026.chr2.nnic	protein_coding	61145109,61159318,61162842,61163052,61164354	61145196,61159439,61162955,61163232,61164658	Gene ID= ENSG00000237651.6 TPM= 2.12 Transcript Type= NA
chr2	61145068	61164808	61145068	61164808	+	ENST00000426997.5@C2orf74	ENST00000426997.5	protein_coding	61145068,61162842,61163052,61164354	61145196,61162955,61163232,61164808	Gene ID= ENSG00000237651.6 TPM= 4.25 Transcript Type= protein_coding
chr2	61145108	61164809	61145108	61164809	+	ENST00000464909.2@C2orf74	ENST00000464909.2	protein_coding	61145108,61163052,61164354	61145196,61163232,61164809	Gene ID= ENSG00000237651.6 TPM= 3.19 Transcript Type= protein_coding
chr2	61177442	61186913	61177442	61186913	+	transcript2037.chr2.nnic@AHSA2	transcript2037.chr2.nnic	protein_coding	61177442,61178981,61181320,61184712,61185502,61186446,61186617	61177789,61179171,61181405,61184800,61185618,61186497,61186913	Gene ID= ENSG00000173209.22 TPM= 4.25 Transcript Type= NA
chr2	61177442	61190134	61177442	61190134	+	transcript2039.chr2.nnic@AHSA2	transcript2039.chr2.nnic	protein_coding	61177442,61178981,61181320,61184712,61185502,61186446,61187909	61177789,61179171,61181405,61184800,61185618,61186497,61190134	Gene ID= ENSG00000173209.22 TPM= 2.12 Transcript Type= NA
chr2	61226788	61280333	61226788	61280333	-	ENST00000453734.1@USP34	ENST00000453734.1	protein_coding	61280244,61278388,61278165,61265984,61265397,61259711,61257204,61257052,61256873,61256384,61248511,61246324,61245210,61241766,61241560,61236325,61236161,61236026,61235845,61232452,61229548,61228827,61228645,61226788	61280333,61278443,61278285,61266167,61265557,61259776,61257350,61257108,61256950,61256478,61248683,61246477,61245288,61241819,61241655,61236389,61236236,61236073,61235910,61232532,61229633,61228995,61228719,61227218	Gene ID= ENSG00000115464.14 TPM= 1.06 Transcript Type= protein_coding
chr2	61187463	61470769	61187463	61470769	-	ENST00000398571.6@USP34	ENST00000398571.6	protein_coding	61470650,61420746,61405708,61395183,61394853,61383269,61380169,61378363,61370498,61370321,61350568,61350260,61349250,61348756,61347870,61343815,61339566,61339351,61333882,61331276,61325375,61319173,61317654,61314875,61314585,61311784,61311540,61301354,61300951,61296800,61295168,61294949,61293464,61288677,61284875,61283409,61283145,61281090,61280244,61278388,61278165,61265984,61265397,61259711,61257204,61257052,61256873,61256384,61248511,61246324,61245210,61241766,61241560,61236325,61236161,61236026,61235845,61232452,61229548,61228827,61228645,61227067,61223248,61223060,61222619,61221502,61220310,61214060,61211772,61208899,61206760,61206017,61204497,61204256,61203140,61192901,61190518,61190271,61188910,61187463	61470769,61420833,61406128,61395233,61395002,61383336,61380361,61378424,61370579,61370413,61350693,61350389,61349285,61348886,61348480,61344029,61339681,61339478,61333971,61331371,61325457,61319327,61317767,61314974,61314744,61311910,61311687,61301454,61301160,61296925,61295290,61295032,61293550,61288877,61284957,61283449,61283269,61281242,61280348,61278443,61278285,61266167,61265557,61259776,61257350,61257108,61256950,61256478,61248683,61246477,61245288,61241819,61241655,61236389,61236236,61236073,61235910,61232532,61229633,61228995,61228719,61227218,61223296,61223164,61222663,61221606,61220457,61214694,61211929,61208977,61206886,61206124,61204601,61204380,61203263,61192980,61190658,61190414,61189069,61188709	Gene ID= ENSG00000115464.14 TPM= 2.12 Transcript Type= protein_coding
chr2	61355166	61356195	61355166	61356195	+	transcript2080.chr2.nnic@NA	transcript2080.chr2.nnic	NA	61355166	61356195	Gene ID= novel_gene_chr2_2081 TPM= 3.19 Transcript Type= NA
chr2	61477934	61538245	61477934	61538245	-	transcript2057.chr2.nnic@XPO1	transcript2057.chr2.nnic	protein_coding	61537562,61534558,61533772,61526420,61522611,61502249,61501996,61499713,61498865,61498673,61496879,61495455,61493894,61492915,61492567,61492325,61492035,61490642,61488588,61488165,61485768,61483937,61482957,61482380,61481185,61477934	61538245,61534654,61533903,61526521,61522683,61502310,61502040,61499894,61498913,61498792,61497007,61495613,61494091,61493053,61492748,61492481,61492198,61490776,61488771,61488271,61485962,61484105,61483091,61482539,61481281,61478966	Gene ID= ENSG00000082898.16 TPM= 6.9 Transcript Type= NA
chr2	61497114	61500596	61497114	61500596	+	transcript2082.chr2.nnic@NA	transcript2082.chr2.nnic	NA	61497114	61500596	Gene ID= novel_gene_chr2_2083 TPM= 6.37 Transcript Type= NA
chr2	61824856	61854143	61824856	61854143	-	ENST00000405894.3@FAM161A	ENST00000405894.3	protein_coding	61853859,61842122,61839421,61836010,61827104,61824856	61854143,61842360,61840581,61836109,61827258,61826599	Gene ID= ENSG00000170264.12 TPM= 1.06 Transcript Type= protein_coding
chr2	61824856	61854053	61824856	61854053	-	ENST00000404929.5@FAM161A	ENST00000404929.5	protein_coding	61853859,61842122,61839421,61838538,61836010,61827104,61824856	61854053,61842360,61840581,61838705,61836109,61827258,61826599	Gene ID= ENSG00000170264.12 TPM= 1.06 Transcript Type= protein_coding
chr2	61868089	61888804	61868089	61888804	-	ENST00000394440.7@CCT4	ENST00000394440.7	protein_coding	61888381,61885020,61883459,61880286,61878869,61877393,61876920,61876095,61873197,61873002,61872458,61872082,61869440,61868089	61888804,61885072,61883548,61880394,61879011,61877514,61877052,61876234,61873293,61873112,61872588,61872316,61869553,61868706	Gene ID= ENSG00000115484.14 TPM= 110.46 Transcript Type= protein_coding
chr2	61887948	61888458	61887948	61888458	-	ENST00000461370.1@CCT4	ENST00000461370.1	protein_coding	61888381,61887948	61888458,61888257	Gene ID= ENSG00000115484.14 TPM= 2.12 Transcript Type= processed_transcript
chr2	61887944	61888659	61887944	61888659	-	transcript2095.chr2.nnic@NA	transcript2095.chr2.nnic	NA	61887944	61888659	Gene ID= novel_gene_chr2_2096 TPM= 2.12 Transcript Type= NA
chr2	61920793	62136058	61920793	62136058	+	transcript2098.chr2.nnic@COMMD1	transcript2098.chr2.nnic	protein_coding	61920793,61921003,62000701,62135831	61920866,61921120,62000982,62136058	Gene ID= ENSG00000173163.10 TPM= 3.72 Transcript Type= NA
chr2	61905647	62136247	61905647	62136247	+	ENST00000311832.5@COMMD1	ENST00000311832.5	protein_coding	61905647,62000701,62135831	61905858,62000982,62136247	Gene ID= ENSG00000173163.10 TPM= 32.93 Transcript Type= protein_coding
chr2	61920774	62136058	61920774	62136058	+	transcript2103.chr2.nnic@COMMD1	transcript2103.chr2.nnic	protein_coding	61920774,62000701,62135831	61920866,62000982,62136058	Gene ID= ENSG00000173163.10 TPM= 4.78 Transcript Type= NA
chr2	62194436	62195946	62194436	62195946	-	transcript2110.chr2.nnic@NA	transcript2110.chr2.nnic	NA	62194436	62195946	Gene ID= novel_gene_chr2_2111 TPM= 2.12 Transcript Type= NA
chr2	62196113	62224731	62196113	62224731	+	ENST00000301998.4@B3GNT2	ENST00000301998.4	protein_coding	62196113,62222212	62196355,62224731	Gene ID= ENSG00000170340.10 TPM= 79.66 Transcript Type= protein_coding
chr2	63121383	63588262	63121383	63588262	-	transcript2114.chr2.nic@WDPCP	transcript2114.chr2.nic	protein_coding	63588197,63571375,63492856,63487447,63486542,63484917,63484604,63439757,63437421,63433745,63404048,63381906,63378386,63313248,63259307,63174670,63153495,63152914,63121383	63588262,63571626,63492940,63487494,63486586,63484987,63484663,63439871,63437554,63433936,63404657,63382094,63378509,63313311,63259409,63174832,63153574,63152945,63122056	Gene ID= ENSG00000143951.15 TPM= 3.19 Transcript Type= NA
chr2	63121383	63588799	63121383	63588799	-	ENST00000272321.11@WDPCP	ENST00000272321.11	protein_coding	63588197,63492856,63487447,63486542,63484917,63484604,63439757,63437421,63433745,63404048,63381906,63378386,63313248,63259307,63174670,63153495,63152914,63121383	63588799,63492940,63487494,63486586,63484987,63484663,63439871,63437554,63433936,63404657,63382094,63378509,63313311,63259409,63174832,63153574,63152945,63122056	Gene ID= ENSG00000143951.15 TPM= 3.19 Transcript Type= protein_coding
chr2	63223730	63225067	63223730	63225067	+	transcript2149.chr2.nnic@NA	transcript2149.chr2.nnic	NA	63223730	63225067	Gene ID= novel_gene_chr2_2150 TPM= 2.12 Transcript Type= NA
chr2	63553858	63554827	63553858	63554827	-	transcript2153.chr2.nnic@NA	transcript2153.chr2.nnic	NA	63553858	63554827	Gene ID= novel_gene_chr2_2154 TPM= 2.12 Transcript Type= NA
chr2	63588609	63607197	63588609	63607197	+	ENST00000233114.12@MDH1	ENST00000233114.12	protein_coding	63588609,63594488,63595423,63597399,63599170,63604696,63605280,63605939,63606862	63589046,63594586,63595519,63597574,63599292,63604872,63605393,63606028,63607197	Gene ID= ENSG00000014641.17 TPM= 2992.36 Transcript Type= protein_coding
chr2	63589151	63607194	63589151	63607194	+	ENST00000539945.5@MDH1	ENST00000539945.5	protein_coding	63589151,63594488,63595423,63597399,63599170,63604696,63605280,63605939,63606862	63589384,63594586,63595519,63597574,63599292,63604872,63605393,63606028,63607194	Gene ID= ENSG00000014641.17 TPM= 42.38 Transcript Type= protein_coding
chr2	63675799	63827847	63675799	63827847	-	transcript2169.chr2.nnic@WDPCP	transcript2169.chr2.nnic	protein_coding	63827622,63813622,63675799	63827847,63813707,63678253	Gene ID= ENSG00000143951.15 TPM= 3.19 Transcript Type= NA
chr2	63840940	63891562	63840940	63891562	+	ENST00000394417.6@UGP2	ENST00000394417.6	protein_coding	63840940,63856306,63857829,63882466,63883960,63885589,63886341,63887402,63890081,63891120	63841232,63856433,63857936,63882651,63884093,63885886,63886538,63887644,63890185,63891562	Gene ID= ENSG00000169764.15 TPM= 309.35 Transcript Type= protein_coding
chr2	63841710	63891562	63841710	63891562	+	ENST00000337130.9@UGP2	ENST00000337130.9	protein_coding	63841710,63856306,63857829,63882466,63883960,63885589,63886341,63887402,63890081,63891120	63842204,63856433,63857936,63882651,63884093,63885886,63886538,63887644,63890185,63891562	Gene ID= ENSG00000169764.15 TPM= 174.81 Transcript Type= protein_coding
chr2	63842325	63891561	63842325	63891561	+	ENST00000445915.6@UGP2	ENST00000445915.6	protein_coding	63842325,63856306,63857829,63882466,63883960,63885589,63886341,63887402,63890081,63891120	63842437,63856433,63857936,63882651,63884093,63885886,63886538,63887644,63890185,63891561	Gene ID= ENSG00000169764.15 TPM= 10.54 Transcript Type= protein_coding
chr2	63891876	63894713	63891876	63894713	+	transcript2208.chr2.nnic@NA	transcript2208.chr2.nnic	NA	63891876	63894713	Gene ID= novel_gene_chr2_2209 TPM= 2.12 Transcript Type= NA
chr2	63892901	64019463	63892901	64019463	-	transcript2204.chr2.nnic@VPS54	transcript2204.chr2.nnic	protein_coding	64018938,63983864,63981646,63972166,63968957,63965835,63962058,63949037,63947383,63944600,63942465,63921206,63920446,63919883,63916900,63914182,63913223,63912540,63912345,63899474,63897496,63892901	64019463,63984019,63981887,63972244,63968991,63965966,63962443,63949163,63947490,63944655,63942561,63921335,63920627,63919995,63916963,63914287,63913310,63912661,63912425,63899581,63897590,63893535	Gene ID= ENSG00000143952.19 TPM= 2.12 Transcript Type= NA
chr2	63892146	64019072	63892146	64019072	-	ENST00000409558.8@VPS54	ENST00000409558.8	protein_coding	64018938,63983864,63981646,63972166,63968957,63965835,63962058,63949037,63947383,63944600,63942465,63933673,63921206,63920446,63919883,63916900,63914182,63913223,63912540,63912345,63899474,63897496,63892146	64019072,63984019,63981851,63972244,63968991,63965966,63962443,63949163,63947490,63944655,63942561,63934013,63921335,63920627,63919995,63916963,63914287,63913310,63912661,63912425,63899581,63897590,63893535	Gene ID= ENSG00000143952.19 TPM= 2.12 Transcript Type= protein_coding
chr2	64092652	64144454	64092652	64144454	-	ENST00000358912.4@PELI1	ENST00000358912.4	protein_coding	64144081,64108240,64104701,64100398,64096413,64096125,64092652	64144454,64108379,64104830,64100499,64096610,64096313,64095268	Gene ID= ENSG00000197329.11 TPM= 5.31 Transcript Type= protein_coding
chr2	64454092	64461381	64454092	64461381	+	ENST00000238875.9@LGALSL	ENST00000238875.9	protein_coding	64454092,64455344,64455589,64456288,64458285	64454581,64455415,64455677,64456465,64461381	Gene ID= ENSG00000119862.12 TPM= 13.81 Transcript Type= protein_coding
chr2	64524305	64593005	64524305	64593005	+	ENST00000238856.8@AFTPH	ENST00000238856.8	protein_coding	64524305,64551443,64567562,64569092,64569623,64572946,64579486,64585422,64591885	64524612,64553409,64567713,64569218,64569679,64573068,64579546,64585545,64593005	Gene ID= ENSG00000119844.15 TPM= 5.31 Transcript Type= protein_coding
chr2	64524305	64592134	64524305	64592134	+	transcript2221.chr2.nic@AFTPH	transcript2221.chr2.nic	protein_coding	64524305,64551443,64567562,64569092,64569623,64572946,64585422,64591885	64524612,64553409,64567713,64569218,64569679,64573068,64585545,64592134	Gene ID= ENSG00000119844.15 TPM= 6.37 Transcript Type= NA
chr2	64989401	65023865	64989401	65023865	+	ENST00000234256.3@SLC1A4	ENST00000234256.3	protein_coding	64989401,65001448,65003953,65010597,65016440,65018071,65018545,65020912	64990170,65001490,65004015,65010763,65016673,65018265,65018679,65023865	Gene ID= ENSG00000115902.10 TPM= 11.68 Transcript Type= protein_coding
chr2	65056372	65087004	65056372	65087004	+	ENST00000377990.6@CEP68	ENST00000377990.6	protein_coding	65056372,65069399,65071454,65074282,65077868,65082536,65083639	65056528,65069801,65072980,65074404,65077964,65082709,65087004	Gene ID= ENSG00000011523.13 TPM= 10.62 Transcript Type= protein_coding
chr2	65056401	65074490	65056401	65074490	+	transcript2246.chr2.nic@CEP68	transcript2246.chr2.nic	protein_coding	65056401,65069399,65071454,65074282	65056528,65069801,65072980,65074490	Gene ID= ENSG00000011523.13 TPM= 4.25 Transcript Type= NA
chr2	65086855	65130106	65086855	65130106	-	ENST00000409784.7@RAB1A	ENST00000409784.7	protein_coding	65129893,65104734,65097971,65090983,65088939,65086855	65130106,65104806,65098066,65091078,65089070,65088690	Gene ID= ENSG00000138069.16 TPM= 33.99 Transcript Type= protein_coding
chr2	65087871	65130104	65087871	65130104	-	ENST00000409751.1@RAB1A	ENST00000409751.1	protein_coding	65129893,65104734,65090983,65088939,65087871	65130104,65104806,65091078,65089070,65088690	Gene ID= ENSG00000138069.16 TPM= 4.78 Transcript Type= protein_coding
chr2	65227753	65271253	65227753	65271253	+	ENST00000260641.9@ACTR2	ENST00000260641.9	protein_coding	65227753,65239852,65246524,65251027,65253728,65255545,65261247,65265043,65268564	65227957,65239962,65246739,65251099,65253864,65255694,65261392,65265175,65271253	Gene ID= ENSG00000138071.13 TPM= 14.87 Transcript Type= protein_coding
chr2	65310851	65432650	65310851	65432650	-	transcript2262.chr2.nic@SPRED2	transcript2262.chr2.nic	protein_coding	65432529,65431962,65344719,65334605,65331987,65316734,65310851	65432650,65432084,65344896,65334773,65332051,65316883,65314169	Gene ID= ENSG00000198369.9 TPM= 11.68 Transcript Type= NA
chr2	65344196	65432650	65344196	65432650	-	transcript2266.chr2.nic@SPRED2	transcript2266.chr2.nic	protein_coding	65431962,65344719,65344196	65432650,65344896,65344594	Gene ID= ENSG00000198369.9 TPM= 7.44 Transcript Type= NA
chr2	65428088	65430876	65428088	65430876	+	transcript2268.chr2.nnic@NA	transcript2268.chr2.nnic	NA	65428088	65430876	Gene ID= novel_gene_chr2_2269 TPM= 2.12 Transcript Type= NA
chr2	65545387	65546782	65545387	65546782	-	transcript2273.chr2.nnic@NA	transcript2273.chr2.nnic	NA	65545387	65546782	Gene ID= novel_gene_chr2_2274 TPM= 2.12 Transcript Type= NA
chr2	67397319	67410545	67397319	67410545	+	ENST00000272342.5@ETAA1	ENST00000272342.5	protein_coding	67397319,67399169,67399550,67402862,67403225,67409911	67397671,67399297,67399626,67402974,67405335,67410545	Gene ID= ENSG00000143971.7 TPM= 2.12 Transcript Type= protein_coding
chr2	68042209	68063020	68042209	68063020	-	transcript2290.chr2.nnic@C1D	transcript2290.chr2.nnic	protein_coding	68062945,68053061,68047173,68046344,68045988,68042209	68063020,68053137,68047319,68046410,68046043,68043053	Gene ID= ENSG00000197223.11 TPM= 4.25 Transcript Type= NA
chr2	68129803	68157560	68129803	68157560	-	ENST00000295121.10@WDR92	ENST00000295121.10	protein_coding	68157261,68147467,68144585,68141694,68138742,68137299,68134702,68129803	68157560,68147567,68144715,68141795,68138857,68137433,68134799,68131445	Gene ID= ENSG00000243667.6 TPM= 3.19 Transcript Type= protein_coding
chr2	68134084	68157473	68134084	68157473	-	ENST00000406245.6@WDR92	ENST00000406245.6	protein_coding	68157374,68147467,68144585,68141694,68138742,68137299,68134084	68157473,68147567,68144715,68141795,68138857,68137433,68134799	Gene ID= ENSG00000243667.6 TPM= 1.06 Transcript Type= protein_coding
chr2	68136867	68157535	68136867	68157535	-	transcript2302.chr2.nic@AC017083.4	transcript2302.chr2.nic	protein_coding	68157261,68147467,68144585,68141694,68138742,68136867	68157535,68147567,68144715,68141795,68138857,68137433	Gene ID= ENSG00000273398.6 TPM= 2.12 Transcript Type= NA
chr2	68157844	68176238	68157844	68176238	+	ENST00000263657.6@PNO1	ENST00000263657.6	protein_coding	68157844,68158380,68161683,68162265,68162546,68173347,68174735	68158141,68158529,68161766,68162325,68162663,68173417,68176238	Gene ID= ENSG00000115946.7 TPM= 3.19 Transcript Type= protein_coding
chr2	68178857	68252531	68178857	68252531	-	ENST00000234310.7@PPP3R1	ENST00000234310.7	protein_coding	68252125,68217092,68188514,68187255,68186468,68178857	68252531,68217131,68188690,68187314,68186652,68181010	Gene ID= ENSG00000221823.10 TPM= 3.19 Transcript Type= protein_coding
chr2	68240703	68241860	68240703	68241860	+	transcript2312.chr2.nnic@NA	transcript2312.chr2.nnic	NA	68240703	68241860	Gene ID= novel_gene_chr2_2313 TPM= 2.12 Transcript Type= NA
chr2	68252870	68253848	68252870	68253848	+	ENST00000608069.1@AC017083.2	ENST00000608069.1	antisense_RNA	68252870	68253848	Gene ID= ENSG00000273064.1 TPM= 1.06 Transcript Type= antisense_RNA
chr2	68293010	68319964	68293010	68319964	-	transcript2316.chr2.nic@CNRIP1	transcript2316.chr2.nic	protein_coding	68319772,68319222,68317157,68293010	68319964,68319466,68317307,68294026	Gene ID= ENSG00000119865.8 TPM= 4.78 Transcript Type= NA
chr2	68293010	68320006	68293010	68320006	-	ENST00000263655.3@CNRIP1	ENST00000263655.3	protein_coding	68319222,68317157,68293010	68320006,68317307,68294026	Gene ID= ENSG00000119865.8 TPM= 11.15 Transcript Type= protein_coding
chr2	68315117	68319989	68315117	68319989	-	transcript2320.chr2.nic@CNRIP1	transcript2320.chr2.nic	protein_coding	68319222,68315117	68319989,68317307	Gene ID= ENSG00000119865.8 TPM= 3.19 Transcript Type= NA
chr2	68365173	68397453	68365173	68397453	+	ENST00000234313.7@PLEK	ENST00000234313.7	protein_coding	68365173,68380328,68380723,68382542,68386502,68388387,68393162,68394107,68395680	68365393,68380483,68380904,68382633,68386686,68388491,68393245,68394176,68397453	Gene ID= ENSG00000115956.9 TPM= 5.31 Transcript Type= protein_coding
chr2	68774801	68826833	68774801	68826833	+	ENST00000409220.5@ARHGAP25	ENST00000409220.5	protein_coding	68774801,68782233,68787840,68807273,68813287,68816289,68817873,68819123,68822340,68825987	68775420,68782320,68787956,68807480,68813419,68816362,68817994,68819319,68822872,68826833	Gene ID= ENSG00000163219.11 TPM= 5.31 Transcript Type= protein_coding
chr2	69013178	69249327	69013178	69249327	+	ENST00000303714.8@ANTXR1	ENST00000303714.8	protein_coding	69013178,69040044,69044742,69070647,69071754,69073022,69075590,69077408,69090859,69102842,69123017,69124565,69152169,69170248,69181786,69182493,69193335,69245225	69013651,69040115,69044813,69070728,69071787,69073101,69075658,69077488,69090919,69102940,69123086,69124643,69152264,69170289,69181881,69182660,69193415,69249327	Gene ID= ENSG00000169604.19 TPM= 14.87 Transcript Type= protein_coding
chr2	69013306	69146401	69013306	69146401	+	ENST00000409829.7@ANTXR1	ENST00000409829.7	protein_coding	69013306,69040044,69044742,69070647,69071754,69073022,69075590,69077408,69090859,69102842,69123017,69124565,69145326	69013651,69040115,69044813,69070728,69071787,69073101,69075658,69077488,69090919,69102940,69123086,69124643,69146401	Gene ID= ENSG00000169604.19 TPM= 2.12 Transcript Type= protein_coding
chr2	69319769	69387254	69319769	69387254	-	ENST00000357308.8@GFPT1	ENST00000357308.8	protein_coding	69387065,69374006,69370001,69363545,69359268,69358329,69356496,69354489,69354259,69350078,69348171,69345904,69342152,69338445,69337898,69329684,69329297,69328271,69326914,69319769	69387254,69374113,69370108,69363670,69359326,69358463,69356557,69354568,69354312,69350183,69348334,69345999,69342249,69338565,69338055,69329798,69329424,69328438,69327075,69326233	Gene ID= ENSG00000198380.12 TPM= 6.37 Transcript Type= protein_coding
chr2	69643085	69674349	69643085	69674349	-	ENST00000461002.1@AAK1	ENST00000461002.1	protein_coding	69674023,69643085	69674349,69643274	Gene ID= ENSG00000115977.18 TPM= 1.06 Transcript Type= processed_transcript
chr2	69643093	69643845	69643093	69643845	-	ENST00000492192.1@AAK1	ENST00000492192.1	protein_coding	69643575,69643093	69643845,69643274	Gene ID= ENSG00000115977.18 TPM= 15.93 Transcript Type= processed_transcript
chr2	69463532	69465487	69463532	69465487	-	transcript2370.chr2.nnic@NA	transcript2370.chr2.nnic	NA	69463532	69465487	Gene ID= novel_gene_chr2_2371 TPM= 3.19 Transcript Type= NA
chr2	69490665	69493175	69490665	69493175	+	transcript2366.chr2.nnic@NA	transcript2366.chr2.nnic	NA	69490665	69493175	Gene ID= novel_gene_chr2_2367 TPM= 5.31 Transcript Type= NA
chr2	69624450	69627309	69624450	69627309	+	transcript2368.chr2.nnic@NA	transcript2368.chr2.nnic	NA	69624450	69627309	Gene ID= novel_gene_chr2_2369 TPM= 2.12 Transcript Type= NA
chr2	69643806	69825781	69643806	69825781	+	transcript2352.chr2.nic@ANXA4	transcript2352.chr2.nic	protein_coding	69643806,69652998,69720774,69781520,69788054,69804533,69806385,69807906,69810594,69812653,69816101,69818599,69819280,69820699,69825456	69644905,69653282,69720871,69781574,69788141,69804627,69806498,69807996,69810673,69812709,69816194,69818694,69819338,69820821,69825781	Gene ID= ENSG00000196975.15 TPM= 6.37 Transcript Type= NA
chr2	69829642	69881396	69829642	69881396	+	ENST00000282570.3@GMCL1	ENST00000282570.3	protein_coding	69829642,69837547,69839457,69840942,69843149,69844131,69847543,69849652,69854823,69861278,69864900,69869719,69871745,69878909	69830152,69837670,69839553,69841039,69843261,69844196,69847627,69849742,69854960,69861347,69864975,69869864,69871832,69881396	Gene ID= ENSG00000087338.4 TPM= 2.12 Transcript Type= protein_coding
chr2	69893560	69905217	69893560	69905217	+	ENST00000244227.7@SNRNP27	ENST00000244227.7	protein_coding	69893560,69895094,69896436,69897377,69903181,69904254	69894018,69895214,69896548,69897456,69903245,69905217	Gene ID= ENSG00000124380.10 TPM= 15.93 Transcript Type= protein_coding
chr2	69893964	69904671	69893964	69904671	+	ENST00000450162.6@SNRNP27	ENST00000450162.6	protein_coding	69893964,69895094,69896436,69897377,69903181,69904254,69904512	69894018,69895214,69896548,69897456,69903245,69904425,69904671	Gene ID= ENSG00000124380.10 TPM= 3.19 Transcript Type= nonsense_mediated_decay
chr2	69893959	69905218	69893959	69905218	+	ENST00000409116.5@SNRNP27	ENST00000409116.5	protein_coding	69893959,69895094,69896436,69897377,69904254	69894018,69895214,69896548,69897456,69905218	Gene ID= ENSG00000124380.10 TPM= 2.12 Transcript Type= protein_coding
chr2	69939221	69940640	69939221	69940640	+	transcript2386.chr2.nnic@NA	transcript2386.chr2.nnic	NA	69939221	69940640	Gene ID= novel_gene_chr2_2387 TPM= 2.12 Transcript Type= NA
chr2	70029998	70087014	70029998	70087014	-	transcript2390.chr2.nic@PCBP1-AS1	transcript2390.chr2.nic	processed_transcript	70086978,70085547,70083538,70051203,70032133,70029998	70087014,70085624,70083687,70051305,70032255,70031931	Gene ID= ENSG00000179818.13 TPM= 3.19 Transcript Type= NA
chr2	70087454	70089203	70087454	70089203	+	ENST00000303577.6@PCBP1	ENST00000303577.6	protein_coding	70087454	70089203	Gene ID= ENSG00000169564.6 TPM= 647.92 Transcript Type= protein_coding
chr2	70149880	70191071	70149880	70191071	-	ENST00000264434.6@C2orf42	ENST00000264434.6	protein_coding	70190973,70182667,70181163,70179532,70175673,70169557,70165528,70165092,70160625,70149880	70191071,70182935,70181997,70179642,70175777,70169661,70165635,70165192,70160787,70150564	Gene ID= ENSG00000115998.7 TPM= 3.19 Transcript Type= protein_coding
chr2	70149880	70191008	70149880	70191008	-	transcript2409.chr2.nnic@C2orf42	transcript2409.chr2.nnic	protein_coding	70190918,70182667,70181163,70179532,70175673,70169557,70165528,70160625,70149880	70191008,70182935,70181997,70179642,70175777,70169661,70165635,70160787,70150564	Gene ID= ENSG00000115998.7 TPM= 2.12 Transcript Type= NA
chr2	70209444	70248660	70209444	70248660	-	ENST00000415783.6@TIA1	ENST00000415783.6	protein_coding	70248405,70236079,70230756,70229264,70227735,70224554,70216886,70216404,70216208,70215371,70214349,70209444	70248660,70236175,70230854,70229318,70227822,70224629,70216994,70216499,70216292,70215494,70214494,70212845	Gene ID= ENSG00000116001.15 TPM= 2.12 Transcript Type= protein_coding
chr2	70210204	70248580	70210204	70248580	-	ENST00000282574.8@TIA1	ENST00000282574.8	protein_coding	70248405,70236079,70230756,70229264,70229059,70227735,70224554,70216886,70216404,70216208,70215371,70214349,70210204	70248580,70236175,70230854,70229318,70229091,70227822,70224629,70216994,70216499,70216292,70215494,70214491,70212845	Gene ID= ENSG00000116001.15 TPM= 5.31 Transcript Type= protein_coding
chr2	70258086	70261328	70258086	70261328	+	transcript2437.chr2.nic@PCYOX1	transcript2437.chr2.nic	protein_coding	70258086,70259360,70261212	70258276,70259566,70261328	Gene ID= ENSG00000116005.11 TPM= 2.12 Transcript Type= NA
chr2	70258137	70281191	70258137	70281191	+	ENST00000433351.6@PCYOX1	ENST00000433351.6	protein_coding	70258137,70259360,70261212,70274959,70275514,70276734	70258276,70259566,70261386,70275170,70275666,70281191	Gene ID= ENSG00000116005.11 TPM= 14.87 Transcript Type= protein_coding
chr2	70281362	70293771	70281362	70293771	-	ENST00000272348.6@SNRPG	ENST00000272348.6	protein_coding	70293618,70289350,70288068,70281362	70293771,70289372,70288192,70281684	Gene ID= ENSG00000143977.13 TPM= 10.09 Transcript Type= protein_coding
chr2	70281367	70293740	70281367	70293740	-	ENST00000429728.1@SNRPG	ENST00000429728.1	protein_coding	70293618,70288068,70281367	70293740,70288192,70281684	Gene ID= ENSG00000143977.13 TPM= 5.84 Transcript Type= processed_transcript
chr2	70295975	70302090	70295975	70302090	-	ENST00000037869.7@FAM136A	ENST00000037869.7	protein_coding	70301925,70300840,70295975	70302090,70300980,70297477	Gene ID= ENSG00000035141.7 TPM= 46.2 Transcript Type= protein_coding
chr2	70295976	70302056	70295976	70302056	-	ENST00000460307.1@FAM136A	ENST00000460307.1	protein_coding	70301925,70300840,70295976	70302056,70301603,70297477	Gene ID= ENSG00000035141.7 TPM= 5.84 Transcript Type= retained_intron
chr2	70985938	70994945	70985938	70994945	-	ENST00000272438.8@TEX261	ENST00000272438.8	protein_coding	70994688,70993696,70991830,70989749,70988915,70985938	70994945,70993775,70991983,70989816,70989017,70988715	Gene ID= ENSG00000144043.11 TPM= 64.79 Transcript Type= protein_coding
chr2	71068278	71078641	71068278	71078641	+	transcript2459.chr2.nic@NAGK	transcript2459.chr2.nic	protein_coding	71068278,71070502,71070741,71071686,71072641,71073482,71075555,71076604,71077558,71078318	71068336,71070586,71070839,71071827,71072751,71073594,71075642,71076701,71077636,71078641	Gene ID= ENSG00000124357.12 TPM= 3.19 Transcript Type= NA
chr2	71068619	71078641	71068619	71078641	+	ENST00000443938.6@NAGK	ENST00000443938.6	protein_coding	71068619,71070502,71070741,71071686,71072641,71073482,71075555,71076604,71077570,71078318	71068712,71070586,71070839,71071827,71072751,71073594,71075642,71076701,71077636,71078641	Gene ID= ENSG00000124357.12 TPM= 39.3 Transcript Type= protein_coding
chr2	71068622	71078565	71068622	71078565	+	ENST00000244204.10@NAGK	ENST00000244204.10	protein_coding	71068622,71070502,71070741,71071686,71072641,71073482,71075555,71076604,71077558,71078318	71068712,71070586,71070839,71071827,71072751,71073594,71075642,71076701,71077636,71078565	Gene ID= ENSG00000124357.12 TPM= 2.12 Transcript Type= protein_coding
chr2	71074620	71078639	71074620	71078639	+	ENST00000490998.5@NAGK	ENST00000490998.5	protein_coding	71074620,71077558,71078318	71076701,71077636,71078639	Gene ID= ENSG00000124357.12 TPM= 1.06 Transcript Type= retained_intron
chr2	71109684	71112463	71109684	71112463	-	transcript2482.chr2.nnic@NA	transcript2482.chr2.nnic	NA	71109684	71112463	Gene ID= novel_gene_chr2_2483 TPM= 2.12 Transcript Type= NA
chr2	71109687	71130266	71109687	71130266	-	transcript2476.chr2.nnic@MCEE	transcript2476.chr2.nnic	protein_coding	71130180,71124206,71110763,71109687	71130266,71124543,71110858,71110122	Gene ID= ENSG00000124370.10 TPM= 2.12 Transcript Type= NA
chr2	71109684	71130248	71109684	71130248	-	transcript2477.chr2.nic@MCEE	transcript2477.chr2.nic	protein_coding	71129717,71124206,71109684	71130248,71124543,71110122	Gene ID= ENSG00000124370.10 TPM= 5.31 Transcript Type= NA
chr2	71109684	71130266	71109684	71130266	-	transcript2479.chr2.nic@MCEE	transcript2479.chr2.nic	protein_coding	71130180,71124368,71109684	71130266,71124543,71110122	Gene ID= ENSG00000124370.10 TPM= 2.12 Transcript Type= NA
chr2	71109684	71130237	71109684	71130237	-	ENST00000244217.5@MCEE	ENST00000244217.5	protein_coding	71130180,71124206,71109684	71130237,71124543,71110122	Gene ID= ENSG00000124370.10 TPM= 15.93 Transcript Type= protein_coding
chr2	71130314	71150101	71130314	71150101	+	ENST00000244230.6@MPHOSPH10	ENST00000244230.6	protein_coding	71130314,71132898,71133948,71134626,71138490,71139795,71141232,71144428,71147999,71149223,71149866	71130754,71133576,71134105,71134797,71138631,71139862,71141369,71144538,71148106,71149453,71150101	Gene ID= ENSG00000124383.8 TPM= 20.18 Transcript Type= protein_coding
chr2	71331732	71435058	71331732	71435058	+	transcript2487.chr2.nic@ZNF638	transcript2487.chr2.nic	protein_coding	71331732,71348753,71355719,71363153,71363954,71365429,71368382,71369883,71380222,71380513,71396141,71398701,71399559,71400112,71400478,71401956,71403870,71405601,71406128,71408122,71418602,71422814,71424650,71426460,71428547,71431327,71433165,71434742	71331865,71350271,71355780,71363191,71364252,71365706,71368528,71370005,71380280,71380565,71396191,71398772,71399645,71400180,71400518,71402087,71403998,71405642,71406262,71408247,71418639,71424038,71424715,71427414,71428651,71431428,71433283,71435058	Gene ID= ENSG00000075292.18 TPM= 5.58 Transcript Type= NA
chr2	71331764	71435061	71331764	71435061	+	ENST00000264447.8@ZNF638	ENST00000264447.8	protein_coding	71331764,71348753,71355719,71363153,71363954,71365429,71368382,71369883,71380222,71380513,71396141,71398701,71399559,71400112,71400478,71401956,71403870,71405601,71406128,71408122,71418602,71422814,71424650,71426460,71428547,71431327,71433165,71434742	71331875,71350271,71355780,71363191,71364252,71365706,71368528,71370005,71380280,71380565,71396191,71398772,71399645,71400180,71400518,71402087,71403998,71405642,71406262,71408247,71418639,71424038,71424715,71427414,71428651,71431428,71433283,71435061	Gene ID= ENSG00000075292.18 TPM= 4.25 Transcript Type= protein_coding
chr2	71331732	71395756	71331732	71395756	+	transcript2500.chr2.nic@ZNF638	transcript2500.chr2.nic	protein_coding	71331732,71348753,71355719,71363153,71363954,71365429,71368382,71369883,71380222,71380513,71388623,71393394,71395247	71331865,71350271,71355780,71363191,71364252,71365706,71368528,71370005,71380280,71380565,71388723,71393645,71395756	Gene ID= ENSG00000075292.18 TPM= 2.39 Transcript Type= NA
chr2	71276593	71395670	71276593	71395670	+	ENST00000410075.5@ZNF638	ENST00000410075.5	protein_coding	71276593,71348753,71355719,71363153,71363954,71365429,71368382,71369883,71380222,71380513,71388623,71393394,71395247	71276754,71350271,71355780,71363191,71364252,71365706,71368528,71370005,71380280,71380565,71388723,71393645,71395670	Gene ID= ENSG00000075292.18 TPM= 1.06 Transcript Type= protein_coding
chr2	71331762	71352509	71331762	71352509	+	transcript2513.chr2.nic@ZNF638	transcript2513.chr2.nic	protein_coding	71331762,71348753	71331875,71352509	Gene ID= ENSG00000075292.18 TPM= 2.12 Transcript Type= NA
chr2	71331783	71334769	71331783	71334769	+	transcript2514.chr2.nnic@NA	transcript2514.chr2.nnic	NA	71331783	71334769	Gene ID= novel_gene_chr2_2515 TPM= 4.25 Transcript Type= NA
chr2	71337139	71339441	71337139	71339441	-	transcript2516.chr2.nnic@NA	transcript2516.chr2.nnic	NA	71337139	71339441	Gene ID= novel_gene_chr2_2517 TPM= 3.19 Transcript Type= NA
chr2	71453098	71454448	71453098	71454448	-	transcript2526.chr2.nnic@NA	transcript2526.chr2.nnic	NA	71454369,71453098	71454448,71454266	Gene ID= novel_gene_chr2_2527 TPM= 11.68 Transcript Type= NA
chr2	71453722	71686768	71453722	71686768	+	ENST00000258104.7@DYSF	ENST00000258104.7	protein_coding	71453722,71480883,71481879,71503214,71511807,71513716,71515623,71516180,71516989,71520178,71520789,71526220,71528298,71535021,71535268,71539157,71549350,71551041,71551607,71553011,71553807,71555965,71561752,71564058,71567951,71568172,71569820,71570229,71570599,71574198,71589593,71590211,71598564,71600702,71601499,71602776,71611245,71611465,71612641,71613334,71643965,71656162,71658878,71660560,71664268,71665162,71667376,71668754,71669112,71669605,71674197,71679057,71681001,71682530,71686454	71454086,71480938,71481970,71503319,71511921,71513921,71515751,71516242,71517039,71520208,71520904,71526346,71528401,71535089,71535311,71539239,71549391,71551156,71551720,71553188,71553931,71556071,71561944,71564213,71568082,71568338,71569934,71570334,71570741,71574371,71589686,71590288,71598745,71600842,71601528,71602805,71611346,71611626,71612806,71613410,71644063,71656290,71659033,71660651,71664438,71665304,71667515,71668842,71669207,71669746,71674296,71679235,71681110,71682677,71686768	Gene ID= ENSG00000135636.13 TPM= 71.16 Transcript Type= protein_coding
chr2	71519813	71522009	71519813	71522009	-	transcript2533.chr2.nnic@NA	transcript2533.chr2.nnic	NA	71519813	71522009	Gene ID= novel_gene_chr2_2534 TPM= 10.62 Transcript Type= NA
chr2	71545460	71547647	71545460	71547647	+	transcript2529.chr2.nnic@NA	transcript2529.chr2.nnic	NA	71545460	71547647	Gene ID= novel_gene_chr2_2530 TPM= 3.19 Transcript Type= NA
chr2	71622132	71623363	71622132	71623363	-	transcript2537.chr2.nnic@NA	transcript2537.chr2.nnic	NA	71622132	71623363	Gene ID= novel_gene_chr2_2538 TPM= 2.12 Transcript Type= NA
chr2	72129238	72148038	72129238	72148038	-	ENST00000001146.6@CYP26B1	ENST00000001146.6	protein_coding	72147631,72143989,72135144,72134761,72133023,72129238	72148038,72144213,72135419,72134916,72133307,72132619	Gene ID= ENSG00000003137.8 TPM= 8.5 Transcript Type= protein_coding
chr2	72144667	72145763	72144667	72145763	+	transcript2542.chr2.nnic@NA	transcript2542.chr2.nnic	NA	72144667,72145268	72144894,72145763	Gene ID= novel_gene_chr2_2543 TPM= 10.62 Transcript Type= NA
chr2	72713424	72826047	72713424	72826047	-	transcript2560.chr2.nic@EXOC6B	transcript2560.chr2.nic	protein_coding	72825798,72741304,72733071,72731155,72731007,72713424	72826047,72741469,72733118,72731245,72731052,72718307	Gene ID= ENSG00000144036.15 TPM= 3.19 Transcript Type= NA
chr2	72175984	72826041	72175984	72826041	-	ENST00000272427.10@EXOC6B	ENST00000272427.10	protein_coding	72825798,72741304,72733071,72731155,72731007,72718103,72575492,72559453,72515043,72514634,72513132,72499901,72498454,72496454,72495430,72492318,72480616,72465160,72379729,72334947,72184075,72175984	72826041,72741469,72733118,72731245,72731052,72718307,72575668,72559521,72515126,72514680,72513252,72499972,72498551,72496559,72495539,72492429,72480750,72465339,72379870,72335020,72184187,72179461	Gene ID= ENSG00000144036.15 TPM= 133.83 Transcript Type= protein_coding
chr2	72177712	72181220	72177712	72181220	+	transcript2567.chr2.nnic@NA	transcript2567.chr2.nnic	NA	72177712	72181220	Gene ID= novel_gene_chr2_2568 TPM= 6.37 Transcript Type= NA
chr2	72426452	72427141	72426452	72427141	-	transcript2577.chr2.nnic@NA	transcript2577.chr2.nnic	NA	72426452	72427141	Gene ID= novel_gene_chr2_2578 TPM= 2.12 Transcript Type= NA
chr2	72476651	72479940	72476651	72479940	-	transcript2579.chr2.nnic@NA	transcript2579.chr2.nnic	NA	72476651	72479940	Gene ID= novel_gene_chr2_2580 TPM= 2.12 Transcript Type= NA
chr2	72613050	72615603	72613050	72615603	+	transcript2569.chr2.nnic@NA	transcript2569.chr2.nnic	NA	72613050	72615603	Gene ID= novel_gene_chr2_2570 TPM= 5.31 Transcript Type= NA
chr2	72619673	72622241	72619673	72622241	+	transcript2571.chr2.nnic@NA	transcript2571.chr2.nnic	NA	72619673	72622241	Gene ID= novel_gene_chr2_2572 TPM= 2.12 Transcript Type= NA
chr2	72636316	72636840	72636316	72636840	+	transcript2575.chr2.nnic@NA	transcript2575.chr2.nnic	NA	72636316	72636840	Gene ID= novel_gene_chr2_2576 TPM= 2.12 Transcript Type= NA
chr2	72806018	72808666	72806018	72808666	-	transcript2581.chr2.nnic@NA	transcript2581.chr2.nnic	NA	72806018	72808666	Gene ID= novel_gene_chr2_2582 TPM= 2.12 Transcript Type= NA
chr2	72822162	72823169	72822162	72823169	+	transcript2573.chr2.nnic@NA	transcript2573.chr2.nnic	NA	72822162	72823169	Gene ID= novel_gene_chr2_2574 TPM= 9.56 Transcript Type= NA
chr2	72887426	72892158	72887426	72892158	+	transcript2585.chr2.nnic@SPR	transcript2585.chr2.nnic	protein_coding	72887426,72888314,72891347	72888101,72888604,72892158	Gene ID= ENSG00000116096.5 TPM= 2.12 Transcript Type= NA
chr2	72887422	72892158	72887422	72892158	+	transcript2587.chr2.nic@SPR	transcript2587.chr2.nic	protein_coding	72887422,72891347	72888604,72892158	Gene ID= ENSG00000116096.5 TPM= 6.37 Transcript Type= NA
chr2	72887360	72892158	72887360	72892158	+	ENST00000234454.5@SPR	ENST00000234454.5	protein_coding	72887360,72888314,72891347	72887736,72888604,72892158	Gene ID= ENSG00000116096.5 TPM= 71.16 Transcript Type= protein_coding
chr2	73073382	73089706	73073382	73089706	-	transcript2595.chr2.nnic@RAB11FIP5	transcript2595.chr2.nnic	protein_coding	73089627,73088879,73088050,73075993,73073382	73089706,73089315,73088749,73076182,73075724	Gene ID= ENSG00000135631.16 TPM= 14.34 Transcript Type= NA
chr2	73073382	73113018	73073382	73113018	-	ENST00000258098.6@RAB11FIP5	ENST00000258098.6	protein_coding	73112347,73088879,73088050,73075993,73073382	73113018,73089315,73088749,73076182,73075724	Gene ID= ENSG00000135631.16 TPM= 32.4 Transcript Type= protein_coding
chr2	73073384	73089655	73073384	73089655	-	ENST00000493523.2@RAB11FIP5	ENST00000493523.2	protein_coding	73088879,73088050,73075993,73073384	73089655,73088749,73076182,73075724	Gene ID= ENSG00000135631.16 TPM= 12.75 Transcript Type= processed_transcript
chr2	73214222	73227237	73214222	73227237	+	ENST00000389501.8@SMYD5	ENST00000389501.8	protein_coding	73214222,73218861,73220051,73220661,73221165,73221826,73222755,73223036,73223426,73223947,73224866,73225631,73225796	73214362,73218969,73220190,73220782,73221234,73221930,73222817,73223106,73223532,73224003,73224960,73225701,73227237	Gene ID= ENSG00000135632.11 TPM= 39.3 Transcript Type= protein_coding
chr2	73228006	73233228	73228006	73233228	-	ENST00000258083.2@PRADC1	ENST00000258083.2	protein_coding	73233094,73230113,73229461,73228795,73228006	73233228,73230213,73229570,73228962,73228574	Gene ID= ENSG00000135617.3 TPM= 240.05 Transcript Type= protein_coding
chr2	73234236	73253021	73234236	73253021	+	ENST00000539919.5@CCT7	ENST00000539919.5	protein_coding	73234236,73235550,73239643,73240437,73243004,73243997,73244544,73247762,73248991,73249819,73250306,73251226,73252640	73234384,73235645,73239796,73240543,73243129,73244049,73244715,73247926,73249179,73249916,73250438,73251432,73253021	Gene ID= ENSG00000135624.15 TPM= 19.47 Transcript Type= protein_coding
chr2	73234238	73253004	73234238	73253004	+	ENST00000258091.9@CCT7	ENST00000258091.9	protein_coding	73234238,73239643,73240437,73243004,73243997,73244544,73247762,73248991,73249819,73250306,73251226,73252640	73234384,73239796,73240543,73243129,73244049,73244715,73247926,73249179,73249916,73250438,73251432,73253004	Gene ID= ENSG00000135624.15 TPM= 359.89 Transcript Type= protein_coding
chr2	73234236	73253021	73234236	73253021	+	ENST00000540468.5@CCT7	ENST00000540468.5	protein_coding	73234236,73243004,73243997,73244544,73247762,73248991,73249819,73250306,73251226,73252640	73234384,73243129,73244049,73244715,73247926,73249179,73249916,73250438,73251432,73253021	Gene ID= ENSG00000135624.15 TPM= 13.63 Transcript Type= protein_coding
chr2	73729890	73737400	73729890	73737400	-	ENST00000318190.7@TPRKB	ENST00000318190.7	protein_coding	73737302,73734429,73732584,73732163,73730560,73729890	73737400,73734591,73732700,73732285,73730736,73730029	Gene ID= ENSG00000144034.14 TPM= 3.19 Transcript Type= protein_coding
chr2	73729830	73737386	73729830	73737386	-	ENST00000272424.9@TPRKB	ENST00000272424.9	protein_coding	73737302,73734429,73732163,73730560,73729830	73737386,73734591,73732285,73730736,73730029	Gene ID= ENSG00000144034.14 TPM= 7.44 Transcript Type= protein_coding
chr2	73729169	73737375	73729169	73737375	-	ENST00000463231.5@TPRKB	ENST00000463231.5	protein_coding	73737302,73734528,73732163,73730560,73729169	73737375,73734591,73732285,73730736,73729305	Gene ID= ENSG00000144034.14 TPM= 1.06 Transcript Type= processed_transcript
chr2	73729890	73737400	73729890	73737400	-	ENST00000409716.6@TPRKB	ENST00000409716.6	protein_coding	73737302,73734429,73732584,73732163,73730560,73729890	73737400,73734588,73732700,73732285,73730736,73730029	Gene ID= ENSG00000144034.14 TPM= 1.06 Transcript Type= protein_coding
chr2	73730264	73737340	73730264	73737340	-	ENST00000497464.5@TPRKB	ENST00000497464.5	protein_coding	73737302,73734429,73732163,73730264	73737340,73734591,73732285,73730736	Gene ID= ENSG00000144034.14 TPM= 1.06 Transcript Type= retained_intron
chr2	73730267	73731922	73730267	73731922	-	transcript2635.chr2.nnic@NA	transcript2635.chr2.nnic	NA	73730267	73731922	Gene ID= novel_gene_chr2_2636 TPM= 2.12 Transcript Type= NA
chr2	73762184	73780157	73762184	73780157	-	ENST00000272444.7@DUSP11	ENST00000272444.7	protein_coding	73779874,73778301,73774913,73773800,73769265,73767161,73766828,73766418,73762184	73780157,73778376,73775044,73773923,73769325,73767207,73766903,73766594,73762859	Gene ID= ENSG00000144048.10 TPM= 14.87 Transcript Type= protein_coding
chr2	73767419	73780121	73767419	73780121	-	ENST00000443070.5@DUSP11	ENST00000443070.5	protein_coding	73779874,73778301,73774913,73773800,73769265,73767419	73780121,73778376,73775044,73773923,73769325,73768952	Gene ID= ENSG00000144048.10 TPM= 1.06 Transcript Type= protein_coding
chr2	73828936	73862881	73828936	73862881	+	transcript2638.chr2.nnic@STAMBP	transcript2638.chr2.nnic	protein_coding	73828936,73830845,73844813,73845167,73847387,73847663,73849363,73850376,73859254,73860052,73862203	73828996,73831059,73844888,73845262,73847572,73847753,73849487,73850513,73859366,73860151,73862881	Gene ID= ENSG00000124356.15 TPM= 2.84 Transcript Type= NA
chr2	73828966	73862881	73828966	73862881	+	transcript2639.chr2.nic@STAMBP	transcript2639.chr2.nic	protein_coding	73828966,73829405,73830845,73844813,73845167,73847387,73849363,73850376,73859254,73860052,73862203	73828996,73829510,73831059,73844888,73845262,73847753,73849487,73850513,73859366,73860151,73862881	Gene ID= ENSG00000124356.15 TPM= 2.84 Transcript Type= NA
chr2	73828987	73867168	73828987	73867168	+	ENST00000394073.5@STAMBP	ENST00000394073.5	protein_coding	73828987,73829405,73830845,73844813,73845167,73847387,73849363,73850376,73859254,73860052,73862203	73829070,73829510,73831059,73844888,73845262,73847753,73849487,73850513,73859366,73860151,73867168	Gene ID= ENSG00000124356.15 TPM= 12.75 Transcript Type= protein_coding
chr2	73828916	73867168	73828916	73867168	+	ENST00000339566.7@STAMBP	ENST00000339566.7	protein_coding	73828916,73830845,73844813,73845167,73847387,73849363,73850376,73859254,73860052,73862203	73828996,73831059,73844888,73845262,73847753,73849487,73850513,73859366,73860151,73867168	Gene ID= ENSG00000124356.15 TPM= 23.37 Transcript Type= protein_coding
chr2	73828961	73862881	73828961	73862881	+	transcript2643.chr2.nic@STAMBP	transcript2643.chr2.nic	protein_coding	73828961,73830845,73844813,73845167,73847387,73849363,73850376,73859254,73860052,73862203	73829070,73831059,73844888,73845262,73847753,73849487,73850513,73859366,73860151,73862881	Gene ID= ENSG00000124356.15 TPM= 3.9 Transcript Type= NA
chr2	73892979	73919865	73892979	73919865	+	ENST00000345517.7@ACTG2	ENST00000345517.7	protein_coding	73892979,73901276,73902360,73908673,73909055,73913485,73914680,73916584,73919432	73893051,73901437,73902488,73908783,73909139,73913646,73914871,73916765,73919865	Gene ID= ENSG00000163017.13 TPM= 1.06 Transcript Type= protein_coding
chr2	73926876	73958946	73926876	73958946	+	transcript2651.chr2.nnic@DGUOK	transcript2651.chr2.nnic	protein_coding	73926876,73938910,73946719,73950585,73957125,73958146,73958710	73927052,73939022,73946888,73950732,73957240,73958245,73958946	Gene ID= ENSG00000114956.19 TPM= 2.12 Transcript Type= NA
chr2	73926826	73958959	73926826	73958959	+	ENST00000629438.2@DGUOK	ENST00000629438.2	protein_coding	73926826,73946719,73950585,73957125,73958146,73958710	73927052,73946906,73950732,73957240,73958245,73958959	Gene ID= ENSG00000114956.19 TPM= 11.68 Transcript Type= protein_coding
chr2	73926866	73958946	73926866	73958946	+	transcript2657.chr2.nic@DGUOK	transcript2657.chr2.nic	protein_coding	73926866,73946719,73950585,73958146,73958710	73927052,73946906,73950732,73958245,73958946	Gene ID= ENSG00000114956.19 TPM= 2.12 Transcript Type= NA
chr2	73926878	73958946	73926878	73958946	+	transcript2661.chr2.nnic@DGUOK	transcript2661.chr2.nnic	protein_coding	73926878,73958146,73958710	73927052,73958245,73958946	Gene ID= ENSG00000114956.19 TPM= 2.12 Transcript Type= NA
chr2	73926826	73958961	73926826	73958961	+	ENST00000348222.3@DGUOK	ENST00000348222.3	protein_coding	73926826,73938910,73946719,73958146,73958710	73927052,73939022,73946906,73958245,73958961	Gene ID= ENSG00000114956.19 TPM= 8.5 Transcript Type= protein_coding
chr2	73926826	73958961	73926826	73958961	+	ENST00000264093.8@DGUOK	ENST00000264093.8	protein_coding	73926826,73938910,73946719,73950585,73957125,73958146,73958710	73927052,73939022,73946906,73950732,73957240,73958245,73958961	Gene ID= ENSG00000114956.19 TPM= 16.99 Transcript Type= protein_coding
chr2	73926875	73958946	73926875	73958946	+	ENST00000418996.5@DGUOK	ENST00000418996.5	protein_coding	73926875,73946719,73958146,73958710	73927052,73946906,73958245,73958946	Gene ID= ENSG00000114956.19 TPM= 7.44 Transcript Type= nonsense_mediated_decay
chr2	74122679	74124028	74122679	74124028	-	transcript2664.chr2.nnic@NA	transcript2664.chr2.nnic	NA	74122679	74124028	Gene ID= novel_gene_chr2_2665 TPM= 21.24 Transcript Type= NA
chr2	74126476	74128707	74126476	74128707	+	transcript2662.chr2.nnic@NA	transcript2662.chr2.nnic	NA	74126476	74128707	Gene ID= novel_gene_chr2_2663 TPM= 3.19 Transcript Type= NA
chr2	74135398	74147994	74135398	74147994	-	ENST00000327428.9@BOLA3	ENST00000327428.9	protein_coding	74147821,74145189,74142272,74135398	74147994,74145303,74142360,74135658	Gene ID= ENSG00000163170.11 TPM= 83.91 Transcript Type= protein_coding
chr2	74135415	74147905	74135415	74147905	-	ENST00000295326.4@BOLA3	ENST00000295326.4	protein_coding	74147821,74145189,74135415	74147905,74145303,74135658	Gene ID= ENSG00000163170.11 TPM= 65.85 Transcript Type= protein_coding
chr2	74145997	74147905	74145997	74147905	-	transcript2673.chr2.nnic@NA	transcript2673.chr2.nnic	NA	74145997	74147905	Gene ID= novel_gene_chr2_2674 TPM= 2.12 Transcript Type= NA
chr2	74148039	74150061	74148039	74150061	+	ENST00000423477.2@BOLA3-AS1	ENST00000423477.2	antisense_RNA	74148039,74148698	74148478,74150061	Gene ID= ENSG00000225439.2 TPM= 2.12 Transcript Type= antisense_RNA
chr2	74198614	74217565	74198614	74217565	+	transcript2694.chr2.nnic@MTHFD2	transcript2694.chr2.nnic	protein_coding	74198614,74201382,74205705,74207704,74208569,74209942,74211199,74211741,74214079	74198742,74201479,74205889,74207826,74208721,74210049,74211291,74211866,74217565	Gene ID= ENSG00000065911.11 TPM= 2.12 Transcript Type= NA
chr2	74198562	74217565	74198562	74217565	+	ENST00000394053.6@MTHFD2	ENST00000394053.6	protein_coding	74198562,74205705,74207704,74208569,74209942,74211199,74211741,74214079	74198742,74205889,74207826,74208721,74210049,74211291,74211866,74217565	Gene ID= ENSG00000065911.11 TPM= 10.62 Transcript Type= protein_coding
chr2	74361154	74380355	74361154	74380355	-	ENST00000394003.7@DCTN1	ENST00000394003.7	protein_coding	74380005,74378000,74377648,74377432,74374323,74372928,74371537,74370979,74370621,74370466,74370186,74369965,74369300,74369098,74368728,74367971,74367696,74367352,74367045,74366783,74366459,74366244,74365893,74365515,74365075,74363614,74363294,74362994,74362650,74362052,74361154	74380355,74378245,74377726,74377466,74374340,74372948,74371728,74371176,74370825,74370544,74370345,74370069,74369491,74369214,74368880,74368131,74367864,74367420,74367107,74366932,74366620,74366375,74366018,74365657,74365241,74363628,74363427,74363177,74362729,74362141,74361636	Gene ID= ENSG00000204843.12 TPM= 34.04 Transcript Type= protein_coding
chr2	74361158	74392064	74361158	74392064	-	transcript2704.chr2.nnic@DCTN1	transcript2704.chr2.nnic	protein_coding	74391794,74378000,74377648,74377432,74372928,74371537,74370979,74370621,74370466,74370186,74369965,74369300,74369098,74368728,74367971,74367696,74367352,74367045,74366783,74366459,74366244,74365893,74365515,74365075,74363294,74362994,74362650,74362052,74361158	74392064,74378245,74377726,74377466,74372948,74371728,74371176,74370825,74370544,74370345,74370069,74369491,74369214,74368880,74368131,74367864,74367420,74367107,74366932,74366620,74366375,74366018,74365657,74365241,74363427,74363177,74362729,74362141,74361636	Gene ID= ENSG00000204843.12 TPM= 223.99 Transcript Type= NA
chr2	74361157	74392087	74361157	74392087	-	ENST00000409240.5@DCTN1	ENST00000409240.5	protein_coding	74391794,74378000,74377648,74377432,74371537,74370979,74370621,74370466,74370186,74369965,74369300,74369098,74368728,74367971,74367696,74367352,74367045,74366783,74366459,74366244,74365893,74365515,74365075,74363294,74362994,74362650,74362052,74361157	74392087,74378245,74377726,74377466,74371728,74371176,74370825,74370544,74370345,74370069,74369491,74369214,74368880,74368131,74367864,74367420,74367107,74366932,74366620,74366375,74366018,74365657,74365241,74363427,74363177,74362729,74362141,74361636	Gene ID= ENSG00000204843.12 TPM= 45.36 Transcript Type= protein_coding
chr2	74361157	74374735	74361157	74374735	-	ENST00000409438.5@DCTN1	ENST00000409438.5	protein_coding	74374323,74372928,74371537,74370979,74370621,74370466,74370186,74369965,74369300,74369098,74368728,74367971,74367696,74367352,74367045,74366783,74366459,74366244,74365893,74365515,74365075,74363294,74362994,74362650,74362052,74361157	74374735,74372948,74371728,74371176,74370825,74370544,74370345,74370069,74369491,74369214,74368880,74368131,74367864,74367420,74367107,74366932,74366620,74366375,74366018,74365657,74365241,74363427,74363177,74362729,74362141,74361636	Gene ID= ENSG00000204843.12 TPM= 38.99 Transcript Type= protein_coding
chr2	74361158	74391865	74361158	74391865	-	ENST00000409868.5@DCTN1	ENST00000409868.5	protein_coding	74391794,74378000,74377648,74377432,74376742,74374323,74372928,74371537,74370979,74370621,74370466,74370186,74369965,74369300,74369098,74368728,74367971,74367696,74367352,74367045,74366783,74366459,74366244,74365893,74365515,74365075,74363294,74362994,74362650,74362052,74361158	74391865,74378245,74377726,74377466,74376762,74374340,74372948,74371728,74371176,74370825,74370544,74370345,74370069,74369491,74369214,74368880,74368131,74367864,74367420,74367107,74366932,74366620,74366375,74366018,74365657,74365241,74363427,74363177,74362729,74362141,74361636	Gene ID= ENSG00000204843.12 TPM= 14.74 Transcript Type= protein_coding
chr2	74421730	74425755	74421730	74425755	+	ENST00000348227.4@WDR54	ENST00000348227.4	protein_coding	74421730,74422153,74422870,74423319,74423478,74423855,74424875,74425075,74425417,74425570	74421816,74422375,74422932,74423385,74423531,74423982,74424975,74425237,74425491,74425755	Gene ID= ENSG00000005448.16 TPM= 4.25 Transcript Type= protein_coding
chr2	74425883	74440631	74425883	74440631	-	ENST00000233330.6@RTKN	ENST00000233330.6	protein_coding	74440353,74432467,74430616,74430465,74430252,74429828,74428848,74428631,74428268,74427424,74427169,74425883	74440631,74432666,74430677,74430518,74430369,74430037,74428942,74428737,74428396,74427592,74427273,74426574	Gene ID= ENSG00000114993.16 TPM= 4.6 Transcript Type= protein_coding
chr2	74425836	74440583	74425836	74440583	-	ENST00000305557.9@RTKN	ENST00000305557.9	protein_coding	74440353,74439551,74432467,74430616,74430465,74430252,74429828,74428848,74428631,74428268,74427424,74427169,74425836	74440583,74439977,74432666,74430677,74430518,74430369,74430037,74428942,74428737,74428396,74427592,74427273,74426574	Gene ID= ENSG00000114993.16 TPM= 5.66 Transcript Type= protein_coding
chr2	74425876	74441899	74425876	74441899	-	ENST00000272430.9@RTKN	ENST00000272430.9	protein_coding	74441706,74432467,74430616,74430465,74430252,74429828,74428848,74428631,74428268,74427424,74427169,74425876	74441899,74432666,74430677,74430518,74430369,74430037,74428942,74428737,74428396,74427592,74427273,74426574	Gene ID= ENSG00000114993.16 TPM= 6.72 Transcript Type= protein_coding
chr2	74455023	74457960	74455023	74457960	+	ENST00000233331.11@INO80B	ENST00000233331.11	protein_coding	74455023,74455406,74455818,74456103,74457334	74455174,74455598,74455936,74456272,74457960	Gene ID= ENSG00000115274.14 TPM= 10.62 Transcript Type= protein_coding
chr2	74458435	74460883	74458435	74460883	+	transcript2731.chr2.nic@WBP1	transcript2731.chr2.nic	protein_coding	74458435,74459438,74459643,74459873,74460221	74458671,74459562,74459745,74460049,74460883	Gene ID= ENSG00000239779.6 TPM= 8.5 Transcript Type= NA
chr2	74458400	74460891	74458400	74460891	+	ENST00000393972.7@WBP1	ENST00000393972.7	protein_coding	74458400,74458997,74459643,74459873,74460221	74458671,74459098,74459745,74460049,74460891	Gene ID= ENSG00000239779.6 TPM= 6.37 Transcript Type= protein_coding
chr2	74458329	74460891	74458329	74460891	+	ENST00000233615.6@WBP1	ENST00000233615.6	protein_coding	74458329,74459643,74459873,74460221	74458671,74459745,74460049,74460891	Gene ID= ENSG00000239779.6 TPM= 26.55 Transcript Type= protein_coding
chr2	74458473	74460880	74458473	74460880	+	transcript2738.chr2.nnic@WBP1	transcript2738.chr2.nnic	protein_coding	74458473,74459643,74460221	74458671,74459745,74460880	Gene ID= ENSG00000239779.6 TPM= 6.37 Transcript Type= NA
chr2	74461058	74465410	74461058	74465410	-	ENST00000452063.6@MOGS	ENST00000452063.6	protein_coding	74465314,74464896,74464496,74463190,74461058	74465410,74464987,74464722,74463386,74463012	Gene ID= ENSG00000115275.11 TPM= 3.72 Transcript Type= protein_coding
chr2	74461057	74465410	74461057	74465410	-	ENST00000233616.8@MOGS	ENST00000233616.8	protein_coding	74464896,74464496,74463190,74461057	74465410,74464722,74463386,74463012	Gene ID= ENSG00000115275.11 TPM= 9.03 Transcript Type= protein_coding
chr2	74463662	74465398	74463662	74465398	-	transcript2746.chr2.nnic@NA	transcript2746.chr2.nnic	NA	74463662	74465398	Gene ID= novel_gene_chr2_2747 TPM= 3.19 Transcript Type= NA
chr2	74471986	74472687	74471986	74472687	-	ENST00000409710.1@MRPL53	ENST00000409710.1	protein_coding	74472569,74471986	74472687,74472252	Gene ID= ENSG00000204822.6 TPM= 43.55 Transcript Type= protein_coding
chr2	74471993	74472664	74471993	74472664	-	ENST00000468875.1@MRPL53	ENST00000468875.1	protein_coding	74472569,74471993	74472664,74472470	Gene ID= ENSG00000204822.6 TPM= 5.31 Transcript Type= retained_intron
chr2	74474102	74482996	74474102	74482996	-	ENST00000290418.4@CCDC142	ENST00000290418.4	protein_coding	74481817,74481452,74481223,74480956,74480769,74475612,74475225,74474916,74474102	74482996,74481538,74481372,74481065,74480882,74475726,74475402,74475115,74474802	Gene ID= ENSG00000135637.13 TPM= 1.06 Transcript Type= protein_coding
chr2	74497517	74499716	74497517	74499716	-	ENST00000377566.8@LBX2	ENST00000377566.8	protein_coding	74499333,74497517	74499716,74498318	Gene ID= ENSG00000179528.15 TPM= 1.06 Transcript Type= protein_coding
chr2	74505042	74507708	74505042	74507708	-	transcript2767.chr2.nnic@NA	transcript2767.chr2.nnic	NA	74505042	74507708	Gene ID= novel_gene_chr2_2768 TPM= 2.12 Transcript Type= NA
chr2	74505043	74508580	74505043	74508580	-	ENST00000233630.10@PCGF1	ENST00000233630.10	protein_coding	74507576,74507042,74506732,74506181,74505952,74505737,74505552,74505339,74505043	74508580,74507147,74506884,74506252,74506057,74505770,74505638,74505419,74505190	Gene ID= ENSG00000115289.13 TPM= 10.09 Transcript Type= protein_coding
chr2	74505043	74507416	74505043	74507416	-	ENST00000475863.5@PCGF1	ENST00000475863.5	protein_coding	74507042,74506732,74506181,74505952,74505737,74505552,74505339,74505043	74507416,74506884,74506252,74506057,74505770,74505638,74505419,74505190	Gene ID= ENSG00000115289.13 TPM= 12.21 Transcript Type= retained_intron
chr2	74526648	74529939	74526648	74529939	-	ENST00000377526.3@AUP1	ENST00000377526.3	protein_coding	74529580,74529362,74529132,74528751,74528417,74528248,74527940,74527736,74527471,74527248,74526941,74526648	74529939,74529499,74529282,74528935,74528489,74528321,74528006,74527838,74527590,74527363,74527059,74526836	Gene ID= ENSG00000115307.16 TPM= 131.18 Transcript Type= protein_coding
chr2	74526645	74529760	74526645	74529760	-	ENST00000425118.5@AUP1	ENST00000425118.5	protein_coding	74529580,74529362,74529132,74528751,74528417,74528248,74527940,74527736,74527471,74527248,74526941,74526645	74529760,74529499,74529282,74528935,74528489,74528321,74528006,74527838,74527590,74527363,74527121,74526836	Gene ID= ENSG00000115307.16 TPM= 5.31 Transcript Type= nonsense_mediated_decay
chr2	74526652	74529697	74526652	74529697	-	ENST00000463900.5@AUP1	ENST00000463900.5	protein_coding	74529580,74529362,74528751,74528417,74528248,74527940,74527736,74527471,74527248,74526941,74526652	74529697,74529499,74529282,74528489,74528321,74528006,74527838,74527590,74527363,74527059,74526836	Gene ID= ENSG00000115307.16 TPM= 31.33 Transcript Type= retained_intron
chr2	74526689	74529685	74526689	74529685	-	ENST00000466894.5@AUP1	ENST00000466894.5	protein_coding	74529580,74529362,74528751,74528417,74528248,74527940,74527736,74527471,74527248,74526941,74526689	74529685,74529499,74529282,74528489,74528321,74528006,74527838,74527590,74527363,74527121,74526836	Gene ID= ENSG00000115307.16 TPM= 6.37 Transcript Type= retained_intron
chr2	74529377	74533348	74529377	74533348	+	ENST00000258080.7@HTRA2	ENST00000258080.7	protein_coding	74529377,74530617,74530911,74531339,74531597,74531856,74532619,74532820	74530512,74530821,74531105,74531371,74531702,74531925,74532714,74533348	Gene ID= ENSG00000115317.11 TPM= 7.44 Transcript Type= protein_coding
chr2	74529965	74532256	74529965	74532256	+	transcript2794.chr2.nnic@HTRA2	transcript2794.chr2.nnic	protein_coding	74529965,74530617,74530911,74531339,74531597,74531856,74532022	74530512,74530821,74531105,74531371,74531702,74531925,74532256	Gene ID= ENSG00000115317.11 TPM= 2.12 Transcript Type= NA
chr2	74529964	74533002	74529964	74533002	+	transcript2795.chr2.nic@HTRA2	transcript2795.chr2.nic	protein_coding	74529964,74530617,74530911,74531339,74531597,74531856,74532820	74530512,74530821,74531105,74531371,74531702,74531925,74533002	Gene ID= ENSG00000115317.11 TPM= 2.12 Transcript Type= NA
chr2	74548423	74553956	74548423	74553956	+	transcript2806.chr2.nnic@NA	transcript2806.chr2.nnic	NA	74548423	74553956	Gene ID= novel_gene_chr2_2807 TPM= 2.12 Transcript Type= NA
chr2	74554086	74557554	74554086	74557554	+	ENST00000233668.9@DOK1	ENST00000233668.9	protein_coding	74554086,74555154,74555575,74555894,74556308	74554814,74555453,74555668,74556078,74557554	Gene ID= ENSG00000115325.13 TPM= 4.25 Transcript Type= protein_coding
chr2	74554731	74557551	74554731	74557551	+	ENST00000340004.6@DOK1	ENST00000340004.6	protein_coding	74554731,74555154,74555575,74556308	74554814,74555453,74555668,74557551	Gene ID= ENSG00000115325.13 TPM= 2.12 Transcript Type= protein_coding
chr2	74654228	74683853	74654228	74683853	+	ENST00000611975.4@SEMA4F	ENST00000611975.4	protein_coding	74654228,74656534,74657565,74662732,74673457,74673677,74674498,74674888,74675162,74675525,74675749,74679276,74679599	74654521,74656685,74657624,74662825,74673576,74673828,74674676,74675035,74675384,74675634,74675909,74679334,74683853	Gene ID= ENSG00000135622.12 TPM= 2.12 Transcript Type= protein_coding
chr2	74833981	74893359	74833981	74893359	+	ENST00000290573.6@HK2	ENST00000290573.6	protein_coding	74833981,74854293,74867636,74872300,74873276,74873844,74874266,74877166,74878688,74880265,74881711,74882120,74885494,74886294,74886490,74887903,74889245,74890797	74834643,74854455,74867784,74872419,74873371,74873943,74874449,74877321,74878921,74880569,74881859,74882239,74885589,74886393,74886673,74888058,74889478,74893359	Gene ID= ENSG00000159399.9 TPM= 22.31 Transcript Type= protein_coding
chr2	74958492	74970128	74958492	74970128	+	ENST00000483063.1@POLE4	ENST00000483063.1	protein_coding	74958492,74959341,74960105,74969409	74958892,74959425,74960146,74970128	Gene ID= ENSG00000115350.11 TPM= 20.18 Transcript Type= protein_coding
chr2	75492318	75560913	75492318	75560913	-	ENST00000393913.7@EVA1A	ENST00000393913.7	protein_coding	75560680,75522365,75518056,75492318	75560913,75522487,75518208,75493609	Gene ID= ENSG00000115363.13 TPM= 1.06 Transcript Type= protein_coding
chr2	75646776	75652197	75646776	75652197	+	transcript2840.chr2.nic@MRPL19	transcript2840.chr2.nic	protein_coding	75646776,75647102,75652142	75646910,75647219,75652197	Gene ID= ENSG00000115364.13 TPM= 3.19 Transcript Type= NA
chr2	75646803	75670753	75646803	75670753	+	ENST00000409374.5@MRPL19	ENST00000409374.5	protein_coding	75646803,75647102,75652142,75652523,75654736,75655064,75670579	75646910,75647219,75652260,75652657,75654917,75655302,75670753	Gene ID= ENSG00000115364.13 TPM= 1.06 Transcript Type= protein_coding
chr2	75662706	75710989	75662706	75710989	-	ENST00000321027.7@GCFC2	ENST00000321027.7	protein_coding	75710591,75706523,75702199,75701190,75696200,75694241,75691977,75690638,75689969,75689026,75687827,75680193,75673444,75671950,75670138,75665929,75662706	75710989,75706651,75702423,75701287,75696315,75694427,75692100,75690719,75690081,75689225,75687977,75680314,75673520,75672016,75670284,75666053,75664783	Gene ID= ENSG00000005436.13 TPM= 1.06 Transcript Type= protein_coding
chr2	75701796	75710899	75701796	75710899	-	ENST00000470503.1@GCFC2	ENST00000470503.1	protein_coding	75710591,75706523,75701796	75710899,75706651,75702423	Gene ID= ENSG00000005436.13 TPM= 3.19 Transcript Type= protein_coding
chr2	75657864	75661430	75657864	75661430	-	transcript2847.chr2.nnic@NA	transcript2847.chr2.nnic	NA	75657864	75661430	Gene ID= novel_gene_chr2_2848 TPM= 5.31 Transcript Type= NA
chr2	75661187	75662918	75661187	75662918	+	transcript2843.chr2.nnic@NA	transcript2843.chr2.nnic	NA	75661187	75662918	Gene ID= novel_gene_chr2_2844 TPM= 2.12 Transcript Type= NA
chr2	75710793	75713228	75710793	75713228	+	transcript2845.chr2.nnic@NA	transcript2845.chr2.nnic	NA	75710793	75713228	Gene ID= novel_gene_chr2_2846 TPM= 2.12 Transcript Type= NA
chr2	84423523	84459480	84423523	84459480	-	ENST00000393868.6@SUCLG1	ENST00000393868.6	protein_coding	84459173,84449649,84443284,84441247,84441047,84433352,84431508,84425415,84423523	84459480,84449752,84443400,84441459,84441104,84433435,84431659,84425603,84423772	Gene ID= ENSG00000163541.11 TPM= 433.36 Transcript Type= protein_coding
chr2	84441079	84459261	84441079	84459261	-	ENST00000442240.5@SUCLG1	ENST00000442240.5	protein_coding	84459173,84449649,84448929,84443284,84441247,84441079	84459261,84449752,84448947,84443400,84441459,84441104	Gene ID= ENSG00000163541.11 TPM= 1.06 Transcript Type= nonsense_mediated_decay
chr2	84905625	84906675	84905625	84906675	+	ENST00000233143.5@TMSB10	ENST00000233143.5	protein_coding	84905625,84906003,84906389	84905718,84906117,84906675	Gene ID= ENSG00000034510.5 TPM= 459.92 Transcript Type= protein_coding
chr2	84968611	84970978	84968611	84970978	-	transcript2878.chr2.nnic@NA	transcript2878.chr2.nnic	NA	84968611	84970978	Gene ID= novel_gene_chr2_2879 TPM= 2.12 Transcript Type= NA
chr2	84971502	85053772	84971502	85053772	+	transcript2869.chr2.nic@KCMF1	transcript2869.chr2.nic	protein_coding	84971502,85027889,85035016,85043564,85046104,85049366,85053148	84972240,85028056,85035155,85043665,85046278,85049648,85053772	Gene ID= ENSG00000176407.17 TPM= 13.81 Transcript Type= NA
chr2	85133410	85310388	85133410	85310388	+	ENST00000282111.3@TCF7L1	ENST00000282111.3	protein_coding	85133410,85134016,85134323,85283495,85302484,85303895,85304255,85305260,85306206,85306452,85307642,85309029	85133933,85134079,85134450,85283578,85302616,85303997,85304338,85305403,85306365,85306559,85307717,85310388	Gene ID= ENSG00000152284.4 TPM= 9.56 Transcript Type= protein_coding
chr2	85195642	85198876	85195642	85198876	+	transcript2886.chr2.nnic@NA	transcript2886.chr2.nnic	NA	85195642	85198876	Gene ID= novel_gene_chr2_2887 TPM= 2.12 Transcript Type= NA
chr2	85311659	85312337	85311659	85312337	-	transcript2888.chr2.nnic@NA	transcript2888.chr2.nnic	NA	85311659	85312337	Gene ID= novel_gene_chr2_2889 TPM= 2.12 Transcript Type= NA
chr2	85318027	85328251	85318027	85328251	-	ENST00000398263.6@TGOLN2	ENST00000398263.6	protein_coding	85327917,85326979,85326508,85324915,85318027	85328251,85327685,85326804,85324998,85322741	Gene ID= ENSG00000152291.13 TPM= 33.99 Transcript Type= protein_coding
chr2	85318024	85328425	85318024	85328425	-	ENST00000377386.7@TGOLN2	ENST00000377386.7	protein_coding	85327917,85326508,85324915,85318024	85328425,85327685,85324998,85322741	Gene ID= ENSG00000152291.13 TPM= 55.23 Transcript Type= protein_coding
chr2	85354720	85391748	85354720	85391748	+	ENST00000409013.7@ELMOD3	ENST00000409013.7	protein_coding	85354720,85355076,85355555,85356967,85362186,85363097,85368686,85369739,85371086,85371440,85377344,85389751,85390138,85390760	85354829,85355170,85355598,85357252,85362260,85363166,85368754,85369830,85371209,85371562,85377474,85389827,85390265,85391748	Gene ID= ENSG00000115459.17 TPM= 2.12 Transcript Type= protein_coding
chr2	85354747	85391748	85354747	85391748	+	transcript2906.chr2.nic@ELMOD3	transcript2906.chr2.nic	protein_coding	85354747,85355076,85356967,85362186,85363097,85368686,85369739,85371086,85377344,85387098,85389751,85390138,85390760	85354829,85355170,85357252,85362260,85363166,85368754,85369830,85371209,85377474,85387225,85389827,85390265,85391748	Gene ID= ENSG00000115459.17 TPM= 3.19 Transcript Type= NA
chr2	85354765	85391748	85354765	85391748	+	transcript2907.chr2.nic@ELMOD3	transcript2907.chr2.nic	protein_coding	85354765,85355555,85356967,85362186,85363097,85368686,85369739,85371086,85371440,85377344,85389751,85390138,85390760	85354829,85355598,85357252,85362260,85363166,85368754,85369830,85371209,85371562,85377474,85389827,85390265,85391748	Gene ID= ENSG00000115459.17 TPM= 3.19 Transcript Type= NA
chr2	85354746	85391748	85354746	85391748	+	ENST00000446464.7@ELMOD3	ENST00000446464.7	protein_coding	85354746,85355076,85362186,85363097,85368686,85369739,85371086,85371440,85377344,85387098,85389751,85390138	85354829,85357252,85362260,85363166,85368754,85369830,85371209,85371562,85377474,85387225,85389827,85391748	Gene ID= ENSG00000115459.17 TPM= 1.06 Transcript Type= nonsense_mediated_decay
chr2	85354757	85391748	85354757	85391748	+	ENST00000393852.8@ELMOD3	ENST00000393852.8	protein_coding	85354757,85355076,85356967,85362186,85363097,85368686,85369739,85371086,85371440,85377344,85389751,85390138,85390760	85354829,85355170,85357252,85362260,85363166,85368754,85369830,85371209,85371562,85377474,85389827,85390265,85391748	Gene ID= ENSG00000115459.17 TPM= 4.25 Transcript Type= protein_coding
chr2	85394893	85414074	85394893	85414074	-	ENST00000409724.5@CAPG	ENST00000409724.5	protein_coding	85413984,85402123,85401785,85401529,85401165,85399136,85398690,85398020,85395538,85394893	85414074,85402158,85401957,85401683,85401329,85399285,85398782,85398152,85395626,85394958	Gene ID= ENSG00000042493.15 TPM= 1.06 Transcript Type= protein_coding
chr2	85537467	85539370	85537467	85539370	-	transcript2935.chr2.nnic@NA	transcript2935.chr2.nnic	NA	85537467	85539370	Gene ID= novel_gene_chr2_2936 TPM= 4.25 Transcript Type= NA
chr2	85539165	85545280	85539165	85545280	+	ENST00000306434.7@MAT2A	ENST00000306434.7	protein_coding	85539165,85541083,85541255,85541633,85541829,85542155,85542565,85542901,85543670	85539378,85541160,85541377,85541745,85541972,85542373,85542747,85543034,85545280	Gene ID= ENSG00000168906.12 TPM= 74.35 Transcript Type= protein_coding
chr2	85539165	85545276	85539165	85545276	+	transcript2928.chr2.nic@MAT2A	transcript2928.chr2.nic	protein_coding	85539165,85541083,85541255,85541633,85541829,85542155,85542565,85542901	85539378,85541160,85541377,85541745,85541972,85542373,85542747,85545276	Gene ID= ENSG00000168906.12 TPM= 41.42 Transcript Type= NA
chr2	85558725	85561547	85558725	85561547	-	ENST00000496962.1@GGCX	ENST00000496962.1	protein_coding	85561386,85560815,85558725	85561547,85560985,85559075	Gene ID= ENSG00000115486.11 TPM= 5.31 Transcript Type= processed_transcript
chr2	85577491	85582031	85577491	85582031	+	ENST00000263864.9@VAMP8	ENST00000263864.9	protein_coding	85577491,85579009,85581576	85577649,85579167,85582031	Gene ID= ENSG00000118640.10 TPM= 4.25 Transcript Type= protein_coding
chr2	85584408	85593412	85584408	85593412	+	ENST00000306384.4@VAMP5	ENST00000306384.4	protein_coding	85584408,85591725,85592948	85584493,85591862,85593412	Gene ID= ENSG00000168899.4 TPM= 42.49 Transcript Type= protein_coding
chr2	85584429	85593388	85584429	85593388	+	transcript2940.chr2.nnic@VAMP5	transcript2940.chr2.nnic	protein_coding	85584429,85592948	85584493,85593388	Gene ID= ENSG00000168899.4 TPM= 2.12 Transcript Type= NA
chr2	85595725	85597581	85595725	85597581	+	transcript2949.chr2.nnic@RNF181	transcript2949.chr2.nnic	protein_coding	85595725,85596519,85597104,85597445	85595849,85596649,85597178,85597581	Gene ID= ENSG00000168894.9 TPM= 2.47 Transcript Type= NA
chr2	85595734	85597581	85595734	85597581	+	ENST00000306368.8@RNF181	ENST00000306368.8	protein_coding	85595734,85596519,85596822,85597104,85597445	85595849,85596649,85596931,85597178,85597581	Gene ID= ENSG00000168894.9 TPM= 59.83 Transcript Type= protein_coding
chr2	85595756	85597604	85595756	85597604	+	ENST00000443647.5@RNF181	ENST00000443647.5	protein_coding	85595756,85596519,85596857,85597104,85597445	85595849,85596649,85596931,85597178,85597604	Gene ID= ENSG00000168894.9 TPM= 5.66 Transcript Type= nonsense_mediated_decay
chr2	85598578	85602659	85598578	85602659	-	ENST00000444380.5@TMEM150A	ENST00000444380.5	protein_coding	85602607,85601884,85601021,85600345,85599891,85599525,85598578	85602659,85602064,85601482,85600412,85600018,85599702,85599317	Gene ID= ENSG00000168890.13 TPM= 3.19 Transcript Type= retained_intron
chr2	85598562	85602678	85598562	85602678	-	ENST00000334462.9@TMEM150A	ENST00000334462.9	protein_coding	85602607,85601884,85601435,85601021,85600345,85599891,85599525,85598562	85602678,85602064,85601482,85601107,85600412,85600018,85599702,85599317	Gene ID= ENSG00000168890.13 TPM= 3.19 Transcript Type= protein_coding
chr2	85616157	85649280	85616157	85649280	+	transcript2957.chr2.nic@USP39	transcript2957.chr2.nic	protein_coding	85616157,85619220,85621485,85623646,85625539,85630721,85636053,85637369,85639203,85640976,85644948,85645814,85647930,85648761	85616463,85619289,85621579,85623782,85625691,85630946,85636130,85637436,85639391,85641118,85645083,85645899,85648016,85649280	Gene ID= ENSG00000168883.19 TPM= 3.19 Transcript Type= NA
chr2	85602841	85649280	85602841	85649280	+	transcript2960.chr2.nic@USP39	transcript2960.chr2.nic	protein_coding	85602841,85619220,85621485,85623646,85625539,85630721,85636053,85637369,85639203,85640976,85644948,85647930,85648761	85603081,85619289,85621579,85623782,85625691,85630946,85636130,85637436,85639391,85641118,85645083,85648016,85649280	Gene ID= ENSG00000168883.19 TPM= 5.84 Transcript Type= NA
chr2	85612103	85649282	85612103	85649282	+	ENST00000613444.4@USP39	ENST00000613444.4	protein_coding	85612103,85619220,85621485,85623646,85625539,85630721,85636053,85637369,85639203,85640976,85644948,85647930,85648761	85612359,85619289,85621579,85623782,85625691,85630946,85636130,85637436,85639391,85641118,85645083,85648016,85649282	Gene ID= ENSG00000168883.19 TPM= 2.66 Transcript Type= protein_coding
chr2	85602856	85649280	85602856	85649280	+	ENST00000459775.5@USP39	ENST00000459775.5	protein_coding	85602856,85619220,85621485,85623626,85625539,85630721,85636053,85637369,85639203,85640976,85644948,85647930,85648761	85603081,85619289,85621579,85623782,85625691,85630946,85636130,85637436,85639391,85641118,85645083,85648016,85649280	Gene ID= ENSG00000168883.19 TPM= 11.15 Transcript Type= processed_transcript
chr2	85616169	85649280	85616169	85649280	+	ENST00000409470.5@USP39	ENST00000409470.5	protein_coding	85616169,85619220,85621485,85623646,85625539,85630721,85636053,85637369,85639203,85640976,85644948,85647930,85648761,85649017	85616463,85619289,85621579,85623782,85625691,85630946,85636130,85637436,85639391,85641118,85645083,85648016,85648853,85649280	Gene ID= ENSG00000168883.19 TPM= 5.31 Transcript Type= protein_coding
chr2	85616186	85649277	85616186	85649277	+	ENST00000323701.10@USP39	ENST00000323701.10	protein_coding	85616186,85619220,85621485,85623646,85625539,85630721,85636053,85637369,85639203,85640976,85644948,85647930,85648761	85616463,85619289,85621579,85623782,85625691,85630946,85636130,85637436,85639391,85641118,85645083,85648016,85649277	Gene ID= ENSG00000168883.19 TPM= 28.15 Transcript Type= protein_coding
chr2	85606654	85612029	85606654	85612029	-	ENST00000306336.5@C2orf68	ENST00000306336.5	protein_coding	85611878,85611668,85609435,85606654	85612029,85611786,85609586,85609067	Gene ID= ENSG00000168887.10 TPM= 32.93 Transcript Type= protein_coding
chr2	85608284	85611935	85608284	85611935	-	ENST00000420686.5@C2orf68	ENST00000420686.5	protein_coding	85611668,85609435,85608284	85611935,85609586,85609067	Gene ID= ENSG00000168887.10 TPM= 9.56 Transcript Type= nonsense_mediated_decay
chr2	85610762	85612052	85610762	85612052	-	transcript2975.chr2.nnic@NA	transcript2975.chr2.nnic	NA	85610762	85612052	Gene ID= novel_gene_chr2_2976 TPM= 2.12 Transcript Type= NA
chr2	85694291	85698854	85694291	85698854	+	ENST00000263863.8@GNLY	ENST00000263863.8	protein_coding	85694291,85695320,85695958,85697506,85698564	85694470,85695423,85696056,85697677,85698854	Gene ID= ENSG00000115523.16 TPM= 2.12 Transcript Type= protein_coding
chr2	85753894	85788066	85753894	85788066	+	ENST00000306279.3@ATOH8	ENST00000306279.3	protein_coding	85753894,85763991,85786885	85754957,85764182,85788066	Gene ID= ENSG00000168874.12 TPM= 33.99 Transcript Type= protein_coding
chr2	85837120	85889055	85837120	85889055	-	ENST00000638572.1@ST3GAL5	ENST00000638572.1	protein_coding	85888824,85863362,85861181,85847861,85846377,85844396,85837120	85889055,85863485,85861292,85848204,85846563,85844554,85840392	Gene ID= ENSG00000115525.17 TPM= 2.12 Transcript Type= protein_coding
chr2	85839194	85889000	85839194	85889000	-	ENST00000638227.1@ST3GAL5	ENST00000638227.1	protein_coding	85888824,85870072,85863362,85861181,85847861,85846377,85844396,85839194	85889000,85870258,85863485,85861292,85848204,85846563,85844554,85840392	Gene ID= ENSG00000115525.17 TPM= 1.06 Transcript Type= nonsense_mediated_decay
chr2	85839196	85888939	85839196	85888939	-	ENST00000638885.1@ST3GAL5	ENST00000638885.1	protein_coding	85888824,85863362,85861181,85847861,85847382,85846377,85844396,85839196	85888939,85863485,85861292,85848381,85847562,85846563,85844554,85840392	Gene ID= ENSG00000115525.17 TPM= 1.06 Transcript Type= nonsense_mediated_decay
chr2	85839169	85888963	85839169	85888963	-	ENST00000639119.1@ST3GAL5	ENST00000639119.1	protein_coding	85888824,85863362,85861181,85847861,85846377,85839169	85888963,85863485,85861292,85848204,85846563,85840392	Gene ID= ENSG00000115525.17 TPM= 1.06 Transcript Type= protein_coding
chr2	86106182	86142157	86106182	86142157	+	ENST00000254630.11@PTCD3	ENST00000254630.11	protein_coding	86106182,86108350,86108500,86111113,86116530,86117055,86118921,86121479,86123701,86124995,86125455,86125795,86127161,86127941,86130648,86131078,86132318,86133178,86133346,86134292,86134839,86136521,86136982,86137469	86106351,86108402,86108536,86111158,86116598,86117159,86119044,86121594,86123762,86125082,86125515,86125880,86127305,86127991,86130737,86131106,86132424,86133256,86133436,86134377,86134987,86136562,86137140,86142157	Gene ID= ENSG00000132300.18 TPM= 10.62 Transcript Type= protein_coding
chr2	86106208	86136881	86106208	86136881	+	transcript3005.chr2.nic@PTCD3	transcript3005.chr2.nic	protein_coding	86106208,86108350,86108500,86111113,86116530,86117055,86118921,86121479,86123701,86124995,86125455,86125795,86127161,86127941,86130648,86131078,86132318,86133178,86133346,86134292,86134839,86136521	86106351,86108402,86108536,86111158,86116598,86117159,86119044,86121594,86123762,86125082,86125515,86125880,86127305,86127991,86130737,86131106,86132424,86133256,86133436,86134377,86134987,86136881	Gene ID= ENSG00000132300.18 TPM= 2.12 Transcript Type= NA
chr2	86106208	86138194	86106208	86138194	+	transcript3007.chr2.nnic@PTCD3	transcript3007.chr2.nnic	protein_coding	86106208,86108350,86108500,86111113,86116530,86117055,86118921,86121479,86123701,86124995,86127161,86127941,86130648,86131078,86132318,86133178,86133346,86134292,86134839,86136521,86136982,86137469	86106351,86108402,86108536,86111158,86116598,86117159,86119044,86121594,86123762,86125082,86127305,86127991,86130737,86131106,86132424,86133256,86133436,86134377,86134987,86136562,86137140,86138194	Gene ID= ENSG00000132300.18 TPM= 2.12 Transcript Type= NA
chr2	86143932	86195770	86143932	86195770	-	ENST00000410111.7@IMMT	ENST00000410111.7	protein_coding	86195338,86181299,86179433,86173650,86171208,86170749,86166508,86161976,86159536,86158592,86153560,86151297,86147702,86146068,86143932	86195770,86181372,86179622,86173761,86171345,86170844,86166644,86162079,86159671,86158721,86153574,86151520,86147833,86146197,86144881	Gene ID= ENSG00000132305.20 TPM= 13.75 Transcript Type= protein_coding
chr2	86143936	86195595	86143936	86195595	-	transcript3022.chr2.nic@IMMT	transcript3022.chr2.nic	protein_coding	86195338,86181299,86179433,86173650,86171208,86166508,86161976,86159536,86158592,86153560,86151297,86147702,86146068,86143936	86195595,86181372,86179622,86173761,86171345,86166644,86162079,86159671,86158721,86153574,86151520,86147833,86146197,86144881	Gene ID= ENSG00000132305.20 TPM= 125.81 Transcript Type= NA
chr2	86143932	86195472	86143932	86195472	-	ENST00000449247.6@IMMT	ENST00000449247.6	protein_coding	86195338,86181299,86179433,86173650,86171208,86170749,86166508,86161976,86159536,86158592,86153560,86151297,86147702,86146068,86143932	86195472,86181372,86179622,86173761,86171312,86170844,86166644,86162079,86159671,86158721,86153574,86151520,86147833,86146197,86144881	Gene ID= ENSG00000132305.20 TPM= 24.38 Transcript Type= protein_coding
chr2	86154364	86156612	86154364	86156612	+	transcript3034.chr2.nnic@NA	transcript3034.chr2.nnic	NA	86154364	86156612	Gene ID= novel_gene_chr2_3035 TPM= 3.19 Transcript Type= NA
chr2	86176044	86178329	86176044	86178329	+	transcript3036.chr2.nnic@NA	transcript3036.chr2.nnic	NA	86176044	86178329	Gene ID= novel_gene_chr2_3037 TPM= 2.12 Transcript Type= NA
chr2	86199355	86212838	86199355	86212838	+	ENST00000254644.12@MRPL35	ENST00000254644.12	protein_coding	86199355,86206106,86207183,86210480,86212426	86199533,86206295,86207327,86210613,86212838	Gene ID= ENSG00000132313.14 TPM= 2.12 Transcript Type= protein_coding
chr2	86199463	86213738	86199463	86213738	+	ENST00000409180.1@MRPL35	ENST00000409180.1	protein_coding	86199463,86206106,86207183,86210480,86213628	86199533,86206295,86207327,86210613,86213738	Gene ID= ENSG00000132313.14 TPM= 2.12 Transcript Type= protein_coding
chr2	86199457	86213794	86199457	86213794	+	ENST00000337109.8@MRPL35	ENST00000337109.8	protein_coding	86199457,86206106,86207183,86210480	86199533,86206295,86207327,86213794	Gene ID= ENSG00000132313.14 TPM= 28.68 Transcript Type= protein_coding
chr2	86210516	86337796	86210516	86337796	-	transcript3039.chr2.nnic@REEP1	transcript3039.chr2.nnic	protein_coding	86337479,86282170,86263965,86254694,86251957,86232625,86227363,86219970,86217043,86210516	86337796,86282242,86264041,86254814,86252070,86232802,86227398,86220121,86217110,86210656	Gene ID= ENSG00000068615.17 TPM= 2.12 Transcript Type= NA
chr2	86499591	86504027	86499591	86504027	-	transcript3108.chr2.nnic@NA	transcript3108.chr2.nnic	NA	86499591	86504027	Gene ID= novel_gene_chr2_3109 TPM= 6.37 Transcript Type= NA
chr2	86505444	86563479	86505444	86563479	-	ENST00000409225.2@CHMP3	ENST00000409225.2	protein_coding	86563304,86529218,86510358,86507479,86505444	86563479,86529397,86510479,86507593,86505949	Gene ID= ENSG00000115561.15 TPM= 3.19 Transcript Type= protein_coding
chr2	86542252	86563508	86542252	86563508	-	transcript3107.chr2.nic@CHMP3	transcript3107.chr2.nic	protein_coding	86563304,86542252	86563508,86542312	Gene ID= ENSG00000115561.15 TPM= 11.68 Transcript Type= NA
chr2	86603393	86623855	86603393	86623855	-	ENST00000237455.4@RNF103	ENST00000237455.4	protein_coding	86622661,86620330,86612159,86603393	86623855,86620469,86612274,86605418	Gene ID= ENSG00000239305.6 TPM= 158.26 Transcript Type= protein_coding
chr2	86720173	86778041	86720173	86778041	+	ENST00000283632.4@RMND5A	ENST00000283632.4	protein_coding	86720173,86740927,86751896,86753458,86765027,86765859,86770023,86771558,86773348	86720809,86741069,86752030,86753558,86765193,86766024,86770125,86771712,86778041	Gene ID= ENSG00000153561.12 TPM= 291.03 Transcript Type= protein_coding
chr2	86720314	86721594	86720314	86721594	+	transcript3117.chr2.nnic@NA	transcript3117.chr2.nnic	NA	86720314	86721594	Gene ID= novel_gene_chr2_3118 TPM= 2.12 Transcript Type= NA
chr2	87002552	87076432	87002552	87076432	-	transcript3122.chr2.nnic@AC125232.1	transcript3122.chr2.nnic	unprocessed_pseudogene	87075919,87055658,87052814,87049589,87047188,87043713,87037294,87034152,87032069,87031816,87023455,87022161,87017553,87016302,87002552	87076432,87055800,87052992,87049803,87047306,87043984,87037528,87034243,87032203,87031898,87023533,87022353,87017688,87016408,87003208	Gene ID= ENSG00000231259.4 TPM= 2.12 Transcript Type= NA
chr2	87030675	87076627	87030675	87076627	-	transcript3124.chr2.nnic@AC125232.1	transcript3124.chr2.nnic	unprocessed_pseudogene	87075919,87055658,87052814,87049589,87047188,87043713,87037294,87034152,87032069,87031816,87030675	87076627,87055800,87052992,87049778,87047306,87043984,87037528,87034243,87032203,87031898,87030907	Gene ID= ENSG00000231259.4 TPM= 5.31 Transcript Type= NA
chr2	87050830	87076435	87050830	87076435	-	transcript3128.chr2.nnic@AC125232.1	transcript3128.chr2.nnic	unprocessed_pseudogene	87075919,87055658,87050830	87076435,87055800,87052992	Gene ID= ENSG00000231259.4 TPM= 2.12 Transcript Type= NA
chr2	87344925	87349158	87344925	87349158	-	transcript3130.chr2.nnic@NA	transcript3130.chr2.nnic	NA	87348659,87344925	87349158,87345202	Gene ID= novel_gene_chr2_3131 TPM= 2.12 Transcript Type= NA
chr2	87344925	87349173	87344925	87349173	-	transcript3132.chr2.nnic@NA	transcript3132.chr2.nnic	NA	87348659,87344925	87349173,87345262	Gene ID= novel_gene_chr2_3133 TPM= 6.37 Transcript Type= NA
chr2	87455429	87521518	87455429	87521518	+	ENST00000331944.10@CYTOR	ENST00000331944.10	lincRNA	87455429,87521207	87455645,87521518	Gene ID= ENSG00000222041.10 TPM= 27.62 Transcript Type= lincRNA
chr2	87455429	87457129	87455429	87457129	+	transcript3147.chr2.nnic@NA	transcript3147.chr2.nnic	NA	87455429	87457129	Gene ID= novel_gene_chr2_3148 TPM= 5.31 Transcript Type= NA
chr2	87455476	87739243	87455476	87739243	+	transcript3136.chr2.nnic@AC093616.1	transcript3136.chr2.nnic	unprocessed_pseudogene	87455476,87583258,87606593,87700984,87704333,87707762,87713359,87714048,87714179,87716612,87719807,87722301,87725937,87732387,87735674,87737718,87738023,87739017	87455645,87583346,87606769,87701053,87704600,87707910,87713437,87714084,87714249,87716790,87720021,87722419,87726208,87732621,87735765,87737852,87738105,87739243	Gene ID= ENSG00000234231.3 TPM= 2.12 Transcript Type= NA
chr2	87706871	87717270	87706871	87717270	-	transcript3141.chr2.nnic@NA	transcript3141.chr2.nnic	NA	87716609,87714177,87714041,87713359,87706871	87717270,87714249,87714084,87713431,87707910	Gene ID= novel_gene_chr2_3142 TPM= 2.12 Transcript Type= NA
chr2	88027205	88055801	88027205	88055801	-	transcript3157.chr2.nnic@KRCC1	transcript3157.chr2.nnic	protein_coding	88055626,88036943,88034134,88027205	88055801,88037051,88034231,88028585	Gene ID= ENSG00000172086.7 TPM= 7.44 Transcript Type= NA
chr2	88027205	88055729	88027205	88055729	-	ENST00000347055.3@KRCC1	ENST00000347055.3	protein_coding	88055626,88036943,88034134,88027205	88055729,88037051,88034292,88028585	Gene ID= ENSG00000172086.7 TPM= 28.68 Transcript Type= protein_coding
chr2	88048088	88051179	88048088	88051179	-	transcript3162.chr2.nnic@NA	transcript3162.chr2.nnic	NA	88048088	88051179	Gene ID= novel_gene_chr2_3163 TPM= 2.12 Transcript Type= NA
chr2	88067794	88113384	88067794	88113384	+	transcript3165.chr2.nnic@SMYD1	transcript3165.chr2.nnic	protein_coding	88067794,88084316,88087862,88091012,88093517,88096595,88103058,88106325,88108371,88110354,88113321	88068001,88084492,88088075,88091142,88093555,88096784,88103150,88106488,88108539,88110963,88113384	Gene ID= ENSG00000115593.14 TPM= 10.27 Transcript Type= NA
chr2	88067780	88113387	88067780	88113387	+	ENST00000419482.6@SMYD1	ENST00000419482.6	protein_coding	88067780,88084316,88087862,88091012,88093517,88096595,88103058,88106325,88108371,88110354	88068001,88084492,88088075,88091142,88093555,88096784,88103150,88106488,88108539,88113387	Gene ID= ENSG00000115593.14 TPM= 190.31 Transcript Type= protein_coding
chr2	88067794	88085157	88067794	88085157	+	transcript3176.chr2.nic@SMYD1	transcript3176.chr2.nic	protein_coding	88067794,88084316	88068001,88085157	Gene ID= ENSG00000115593.14 TPM= 5.31 Transcript Type= NA
chr2	88067825	88110854	88067825	88110854	+	ENST00000444564.2@SMYD1	ENST00000444564.2	protein_coding	88067825,88084316,88087862,88091012,88096595,88103058,88106325,88108371,88110354	88068001,88084492,88088075,88091142,88096784,88103150,88106488,88108539,88110854	Gene ID= ENSG00000115593.14 TPM= 18.41 Transcript Type= protein_coding
chr2	88089587	88093865	88089587	88093865	-	transcript3179.chr2.nnic@NA	transcript3179.chr2.nnic	NA	88089587	88093865	Gene ID= novel_gene_chr2_3180 TPM= 81.79 Transcript Type= NA
chr2	88170323	88186626	88170323	88186626	+	transcript3181.chr2.nic@THNSL2	transcript3181.chr2.nic	protein_coding	88170323,88173139,88174639,88175249,88178783,88182699,88182948,88185328,88185898	88170456,88173373,88174833,88175401,88179013,88182847,88183073,88185479,88186626	Gene ID= ENSG00000144115.16 TPM= 10.62 Transcript Type= NA
chr2	88170323	88186636	88170323	88186636	+	transcript3183.chr2.nic@THNSL2	transcript3183.chr2.nic	protein_coding	88170323,88173139,88174639,88175249,88178783,88182699,88182948,88185898	88170456,88173373,88174833,88175401,88179013,88182847,88183073,88186636	Gene ID= ENSG00000144115.16 TPM= 6.37 Transcript Type= NA
chr2	88556743	88627576	88556743	88627576	-	ENST00000303236.7@EIF2AK3	ENST00000303236.7	protein_coding	88626967,88613724,88595469,88593272,88590818,88590443,88588761,88587982,88585841,88583430,88579518,88576554,88574666,88570874,88562289,88558917,88556743	88627576,88613853,88595663,88593405,88591052,88590605,88588901,88588104,88586061,88583542,88579640,88576703,88575446,88571041,88562390,88558979,88557936	Gene ID= ENSG00000172071.11 TPM= 9.56 Transcript Type= protein_coding
chr2	88623999	88627435	88623999	88627435	-	transcript3191.chr2.nnic@NA	transcript3191.chr2.nnic	NA	88623999	88627435	Gene ID= novel_gene_chr2_3192 TPM= 2.12 Transcript Type= NA
chr2	88691644	88750935	88691644	88750935	+	ENST00000283646.4@RPIA	ENST00000283646.4	protein_coding	88691644,88698484,88700009,88729278,88734552,88735669,88736535,88737977,88749981	88691983,88698544,88700064,88729337,88734616,88735737,88736676,88738076,88750935	Gene ID= ENSG00000153574.8 TPM= 13.81 Transcript Type= protein_coding
chr2	88857166	89320126	88857166	89320126	-	transcript3201.chr2.nnic@IGKV1-39	transcript3201.chr2.nnic	IG_V_gene	89320045,89319626,88861886,88857166	89320126,89319920,88861923,88857683	Gene ID= ENSG00000242371.1 TPM= 2.12 Transcript Type= NA
chr2	89542842	89585615	89542842	89585615	-	ENST00000636531.1@AC006453.2	ENST00000636531.1	lincRNA	89585550,89581006,89542842	89585615,89581140,89543836	Gene ID= ENSG00000283196.1 TPM= 5.31 Transcript Type= lincRNA
chr2	90219592	90223172	90219592	90223172	-	transcript3204.chr2.nnic@NA	transcript3204.chr2.nnic	NA	90222882,90219592	90223172,90220041	Gene ID= novel_gene_chr2_3205 TPM= 2.12 Transcript Type= NA
chr2	90241271	90245394	90241271	90245394	-	transcript3206.chr2.nnic@NA	transcript3206.chr2.nnic	NA	90245004,90241271	90245394,90241608	Gene ID= novel_gene_chr2_3207 TPM= 2.12 Transcript Type= NA
chr2	95025684	95053996	95025684	95053996	+	ENST00000309988.8@MAL	ENST00000309988.8	protein_coding	95025684,95047959,95049581,95053381	95025885,95048126,95049706,95053996	Gene ID= ENSG00000172005.10 TPM= 9.56 Transcript Type= protein_coding
chr2	95087207	95121821	95087207	95121821	-	transcript3217.chr2.nnic@MRPS5	transcript3217.chr2.nnic	protein_coding	95121734,95117865,95115066,95109916,95108254,95106423,95104640,95101677,95100837,95100474,95090386,95087207	95121821,95117945,95115203,95110041,95108408,95106457,95104730,95101723,95100894,95100536,95090522,95087581	Gene ID= ENSG00000144029.11 TPM= 3.93 Transcript Type= NA
chr2	95087207	95121822	95087207	95121822	-	transcript3220.chr2.nic@MRPS5	transcript3220.chr2.nic	protein_coding	95121734,95117865,95115066,95109916,95108175,95106423,95101677,95100837,95100474,95090386,95087207	95121822,95117945,95115203,95110041,95108408,95106457,95104730,95100894,95100536,95090522,95087581	Gene ID= ENSG00000144029.11 TPM= 9.77 Transcript Type= NA
chr2	95087207	95121810	95087207	95121810	-	transcript3221.chr2.nnic@MRPS5	transcript3221.chr2.nnic	protein_coding	95121734,95117865,95115066,95109916,95108254,95106423,95101677,95100837,95100474,95090386,95087207	95121810,95117945,95115203,95110041,95108408,95106457,95104730,95100894,95100536,95090522,95087581	Gene ID= ENSG00000144029.11 TPM= 5.52 Transcript Type= NA
chr2	95087207	95122000	95087207	95122000	-	ENST00000272418.6@MRPS5	ENST00000272418.6	protein_coding	95121734,95117865,95115066,95109916,95108175,95106423,95104640,95101677,95100837,95100474,95090386,95087207	95122000,95117945,95115203,95110041,95108408,95106457,95104730,95101723,95100894,95100536,95090522,95087581	Gene ID= ENSG00000144029.11 TPM= 104.84 Transcript Type= protein_coding
chr2	95164193	95165672	95164193	95165672	-	transcript3230.chr2.nnic@NA	transcript3230.chr2.nnic	NA	95164193	95165672	Gene ID= novel_gene_chr2_3231 TPM= 2.12 Transcript Type= NA
chr2	95165438	95182967	95165438	95182967	+	ENST00000614034.4@ZNF2	ENST00000614034.4	protein_coding	95165438,95176188,95177483,95180159,95181103	95165860,95176259,95177609,95180272,95182967	Gene ID= ENSG00000275111.4 TPM= 2.12 Transcript Type= protein_coding
chr2	95165432	95184317	95165432	95184317	+	ENST00000617923.4@ZNF2	ENST00000617923.4	protein_coding	95165432,95177483,95180159,95181103	95165860,95177609,95180272,95184317	Gene ID= ENSG00000275111.4 TPM= 2.12 Transcript Type= protein_coding
chr2	95402708	95413096	95402708	95413096	+	transcript3246.chr2.nic@FAHD2A	transcript3246.chr2.nic	protein_coding	95402708,95405553,95406941,95410527,95410864,95412434,95412677,95412895	95402992,95405803,95407157,95410586,95411026,95412542,95412764,95413096	Gene ID= ENSG00000115042.9 TPM= 7.97 Transcript Type= NA
chr2	95402723	95413096	95402723	95413096	+	ENST00000447036.5@FAHD2A	ENST00000447036.5	protein_coding	95402723,95405277,95405553,95406941,95410527,95410864,95412434,95412677,95412895	95402872,95405402,95405803,95407157,95410586,95411026,95412542,95412764,95413096	Gene ID= ENSG00000115042.9 TPM= 14.34 Transcript Type= protein_coding
chr2	95524974	95526758	95524974	95526758	-	transcript3258.chr2.nnic@NA	transcript3258.chr2.nnic	NA	95524974	95526758	Gene ID= novel_gene_chr2_3259 TPM= 5.31 Transcript Type= NA
chr2	95526822	95528002	95526822	95528002	+	transcript3256.chr2.nnic@NA	transcript3256.chr2.nnic	NA	95526822	95528002	Gene ID= novel_gene_chr2_3257 TPM= 2.12 Transcript Type= NA
chr2	96010546	96023380	96010546	96023380	+	transcript3283.chr2.nnic@FAHD2CP	transcript3283.chr2.nnic	transcribed_unprocessed_pseudogene	96010546,96019201,96019481,96021125,96021368,96022674,96022894	96010732,96019274,96019700,96021233,96021465,96022753,96023380	Gene ID= ENSG00000231584.8 TPM= 2.12 Transcript Type= NA
chr2	96010565	96023380	96010565	96023380	+	transcript3284.chr2.nnic@FAHD2CP	transcript3284.chr2.nnic	transcribed_unprocessed_pseudogene	96010565,96015109,96019201,96021125,96021368,96022674,96022894	96010732,96015325,96019700,96021233,96021465,96022753,96023380	Gene ID= ENSG00000231584.8 TPM= 3.72 Transcript Type= NA
chr2	96010546	96023380	96010546	96023380	+	transcript3293.chr2.nnic@FAHD2CP	transcript3293.chr2.nnic	transcribed_unprocessed_pseudogene	96010546,96019201,96019481,96021125,96021368,96022674	96010732,96019274,96019700,96021233,96021465,96023380	Gene ID= ENSG00000231584.8 TPM= 4.25 Transcript Type= NA
chr2	96010546	96023380	96010546	96023380	+	transcript3294.chr2.nnic@FAHD2CP	transcript3294.chr2.nnic	transcribed_unprocessed_pseudogene	96010546,96019201,96021125,96021368,96022674,96022894	96010732,96019274,96021233,96021465,96022753,96023380	Gene ID= ENSG00000231584.8 TPM= 3.19 Transcript Type= NA
chr2	96010565	96023380	96010565	96023380	+	transcript3296.chr2.nnic@FAHD2CP	transcript3296.chr2.nnic	transcribed_unprocessed_pseudogene	96010565,96015109,96019201,96021125,96021368,96022674	96010732,96015325,96019274,96021233,96021465,96023380	Gene ID= ENSG00000231584.8 TPM= 3.72 Transcript Type= NA
chr2	96010546	96023380	96010546	96023380	+	transcript3301.chr2.nnic@FAHD2CP	transcript3301.chr2.nnic	transcribed_unprocessed_pseudogene	96010546,96019201,96021125,96021368,96022674	96010732,96019700,96021233,96021465,96023380	Gene ID= ENSG00000231584.8 TPM= 10.62 Transcript Type= NA
chr2	96010614	96023380	96010614	96023380	+	ENST00000443258.7@FAHD2CP	ENST00000443258.7	transcribed_unprocessed_pseudogene	96010614,96021125,96021368,96022674,96022894	96010732,96021233,96021465,96022753,96023380	Gene ID= ENSG00000231584.8 TPM= 6.37 Transcript Type= processed_transcript
chr2	96010564	96011953	96010564	96011953	+	transcript3306.chr2.nnic@NA	transcript3306.chr2.nnic	NA	96010564	96011953	Gene ID= novel_gene_chr2_3307 TPM= 3.19 Transcript Type= NA
chr2	96021946	96034946	96021946	96034946	-	transcript3273.chr2.nic@GPAT2	transcript3273.chr2.nic	protein_coding	96034853,96032297,96032033,96031261,96030744,96030406,96027991,96027419,96027007,96026697,96026183,96025930,96025485,96024773,96024427,96024189,96023923,96023309,96023106,96022958,96022668,96021946	96034946,96032419,96032146,96031334,96030848,96030534,96028090,96027552,96027106,96026909,96026305,96026012,96025603,96024843,96024685,96024337,96024000,96023440,96023226,96023023,96022723,96022275	Gene ID= ENSG00000186281.12 TPM= 4.78 Transcript Type= NA
chr2	96021946	96035974	96021946	96035974	-	ENST00000434632.5@GPAT2	ENST00000434632.5	protein_coding	96035914,96034853,96032297,96032033,96031261,96030744,96030406,96027991,96027419,96027007,96026697,96026183,96025930,96025485,96024773,96024427,96024189,96023923,96023309,96023106,96022958,96022668,96021946	96035974,96035245,96032365,96032146,96031334,96030848,96030534,96028090,96027552,96027106,96026909,96026305,96026012,96025603,96024843,96024667,96024337,96024000,96023440,96023226,96023023,96022723,96022275	Gene ID= ENSG00000186281.12 TPM= 1.59 Transcript Type= protein_coding
chr2	96021946	96024785	96021946	96024785	-	transcript3286.chr2.nic@GPAT2	transcript3286.chr2.nic	protein_coding	96024427,96024189,96023309,96023106,96022958,96022668,96021946	96024785,96024337,96024000,96023226,96023023,96022723,96022275	Gene ID= ENSG00000186281.12 TPM= 2.12 Transcript Type= NA
chr2	96112876	96116554	96112876	96116554	-	transcript3308.chr2.nnic@NA	transcript3308.chr2.nnic	NA	96112876	96116554	Gene ID= novel_gene_chr2_3309 TPM= 15.93 Transcript Type= NA
chr2	96143166	96145440	96143166	96145440	-	ENST00000288943.4@DUSP2	ENST00000288943.4	protein_coding	96144967,96144761,96144154,96143166	96145440,96144882,96144373,96144037	Gene ID= ENSG00000158050.4 TPM= 6.37 Transcript Type= protein_coding
chr2	96184859	96208818	96184859	96208818	-	ENST00000337288.9@STARD7	ENST00000337288.9	protein_coding	96208145,96195341,96194958,96193242,96193078,96192369,96187217,96184859	96208818,96195549,96195007,96193352,96193160,96192468,96187301,96186914	Gene ID= ENSG00000084090.13 TPM= 309.89 Transcript Type= protein_coding
chr2	96250911	96266028	96250911	96266028	-	transcript3372.chr2.nnic@TMEM127	transcript3372.chr2.nnic	protein_coding	96265869,96254833,96250911	96266028,96254997,96254115	Gene ID= ENSG00000135956.8 TPM= 37.18 Transcript Type= NA
chr2	96248516	96265994	96248516	96265994	-	ENST00000258439.7@TMEM127	ENST00000258439.7	protein_coding	96265869,96265138,96254833,96248516	96265994,96265512,96254997,96254115	Gene ID= ENSG00000135956.8 TPM= 7.97 Transcript Type= protein_coding
chr2	96251660	96265994	96251660	96265994	-	ENST00000432959.1@TMEM127	ENST00000432959.1	protein_coding	96265869,96265138,96254833,96251660	96265994,96265489,96254997,96254115	Gene ID= ENSG00000135956.8 TPM= 84.44 Transcript Type= protein_coding
chr2	96266224	96273686	96266224	96273686	+	transcript3346.chr2.nic@CIAO1	transcript3346.chr2.nic	protein_coding	96266224,96267321,96267625,96267836,96268457,96271111	96266489,96267469,96267736,96267924,96269355,96273686	Gene ID= ENSG00000144021.2 TPM= 9.03 Transcript Type= NA
chr2	96268288	96268388	96268288	96268388	+	transcript3377.chr2.nnic@NA	transcript3377.chr2.nnic	NA	96268288	96268388	Gene ID= novel_gene_chr2_3378 TPM= 3.19 Transcript Type= NA
chr2	96274336	96305515	96274336	96305515	-	ENST00000323853.9@SNRNP200	ENST00000323853.9	protein_coding	96305393,96304705,96303159,96301524,96300998,96299329,96298815,96298603,96298284,96297637,96297363,96296933,96296536,96295488,96293316,96292972,96291751,96291392,96290684,96290326,96289799,96289227,96289037,96288663,96287863,96287439,96287006,96286688,96286311,96285180,96284358,96283813,96283535,96283201,96281814,96279451,96278809,96278547,96278237,96277807,96277539,96277081,96276904,96275257,96274336	96305515,96304868,96303330,96301716,96301053,96299427,96298967,96298702,96298420,96297720,96297536,96297070,96296691,96295658,96293509,96293095,96291900,96291502,96290815,96290514,96289996,96289379,96289117,96288746,96287969,96287557,96287160,96286877,96286484,96285340,96284585,96284004,96283713,96283352,96281922,96279559,96278998,96278711,96278358,96277950,96277715,96277241,96276985,96275349,96275155	Gene ID= ENSG00000144028.14 TPM= 23.37 Transcript Type= protein_coding
chr2	96527940	96532306	96527940	96532306	-	ENST00000425578.1@AC013270.1	ENST00000425578.1	antisense_RNA	96532227,96529734,96527940	96532306,96529849,96528183	Gene ID= ENSG00000235480.1 TPM= 1.06 Transcript Type= antisense_RNA
chr2	96536751	96552630	96536751	96552630	+	transcript3388.chr2.nnic@ARID5A	transcript3388.chr2.nnic	protein_coding	96536751,96547402,96549321,96549753,96550029,96550574,96551099	96536830,96547517,96549459,96549805,96550285,96550733,96552630	Gene ID= ENSG00000196843.15 TPM= 23.66 Transcript Type= NA
chr2	96536749	96552638	96536749	96552638	+	ENST00000357485.7@ARID5A	ENST00000357485.7	protein_coding	96536749,96547402,96549321,96549753,96550188,96550574,96551099	96536830,96547517,96549459,96549805,96550285,96550733,96552638	Gene ID= ENSG00000196843.15 TPM= 134.04 Transcript Type= protein_coding
chr2	96536752	96552630	96536752	96552630	+	ENST00000412735.5@ARID5A	ENST00000412735.5	protein_coding	96536752,96547402,96549753,96550188,96550574,96551099	96536830,96547517,96549805,96550285,96550733,96552630	Gene ID= ENSG00000196843.15 TPM= 91.29 Transcript Type= nonsense_mediated_decay
chr2	96541046	96544435	96541046	96544435	-	transcript3402.chr2.nnic@NA	transcript3402.chr2.nnic	NA	96541046	96544435	Gene ID= novel_gene_chr2_3403 TPM= 3.19 Transcript Type= NA
chr2	96547444	96552633	96547444	96552633	+	transcript3400.chr2.nnic@NA	transcript3400.chr2.nnic	NA	96547444	96552633	Gene ID= novel_gene_chr2_3401 TPM= 2.12 Transcript Type= NA
chr2	96605211	96609980	96605211	96609980	-	transcript3409.chr2.nic@KANSL3	transcript3409.chr2.nic	protein_coding	96609499,96608864,96605211	96609980,96609064,96608664	Gene ID= ENSG00000114982.17 TPM= 2.12 Transcript Type= NA
chr2	96705929	96740077	96705929	96740077	-	transcript3413.chr2.nic@LMAN2L	transcript3413.chr2.nic	protein_coding	96739854,96737949,96734409,96711864,96711656,96707714,96705929	96740077,96738067,96734526,96712025,96711770,96707833,96707398	Gene ID= ENSG00000114988.11 TPM= 2.12 Transcript Type= NA
chr2	96705929	96740063	96705929	96740063	-	ENST00000264963.8@LMAN2L	ENST00000264963.8	protein_coding	96739854,96737949,96734409,96733519,96711864,96711656,96707714,96705929	96740063,96738067,96734526,96733601,96712025,96711770,96707833,96707398	Gene ID= ENSG00000114988.11 TPM= 78.6 Transcript Type= protein_coding
chr2	96788575	96811891	96788575	96811891	+	transcript3416.chr2.nnic@CNNM4	transcript3416.chr2.nnic	protein_coding	96788575,96797012,96797513,96799057,96799552,96801072,96808561,96809320	96788665,96797155,96797647,96799226,96799648,96801134,96808742,96811891	Gene ID= ENSG00000158158.11 TPM= 9.51 Transcript Type= NA
chr2	96788556	96811891	96788556	96811891	+	transcript3419.chr2.nic@CNNM4	transcript3419.chr2.nic	protein_coding	96788556,96797012,96797513,96799057,96799552,96808561,96809320	96788800,96797155,96797647,96799226,96799648,96808742,96811891	Gene ID= ENSG00000158158.11 TPM= 8.44 Transcript Type= NA
chr2	96788575	96811891	96788575	96811891	+	transcript3420.chr2.nic@CNNM4	transcript3420.chr2.nic	protein_coding	96788575,96797012,96797513,96799057,96799552,96808561,96809320	96788665,96797155,96797647,96799226,96799648,96808742,96811891	Gene ID= ENSG00000158158.11 TPM= 7.38 Transcript Type= NA
chr2	96788606	96811872	96788606	96811872	+	transcript3421.chr2.nnic@CNNM4	transcript3421.chr2.nnic	protein_coding	96788606,96797012,96797513,96799057,96799552,96808561,96809232	96788894,96797155,96797647,96799226,96799648,96808742,96811872	Gene ID= ENSG00000158158.11 TPM= 5.52 Transcript Type= NA
chr2	96804227	96811891	96804227	96811891	+	transcript3423.chr2.nnic@CNNM4	transcript3423.chr2.nnic	protein_coding	96804227,96808559,96809320	96804965,96808742,96811891	Gene ID= ENSG00000158158.11 TPM= 6.32 Transcript Type= NA
chr2	96816234	96835193	96816234	96835193	+	transcript3432.chr2.nic@CNNM3	transcript3432.chr2.nic	protein_coding	96816234,96825058,96826833,96827731,96828099,96828567,96828996,96831969,96832552	96817502,96825201,96826982,96827900,96828195,96828700,96829134,96832068,96835193	Gene ID= ENSG00000168763.15 TPM= 5.31 Transcript Type= NA
chr2	96816245	96833911	96816245	96833911	+	ENST00000377060.7@CNNM3	ENST00000377060.7	protein_coding	96816245,96826833,96827731,96828099,96828567,96828996,96832552	96817502,96826982,96827900,96828195,96828700,96829134,96833911	Gene ID= ENSG00000168763.15 TPM= 1.06 Transcript Type= protein_coding
chr2	96837912	96842704	96837912	96842704	-	transcript3437.chr2.nnic@ANKRD23	transcript3437.chr2.nnic	protein_coding	96842584,96842365,96842060,96840787,96840416,96840232,96839997,96839727,96837912	96842704,96842511,96842185,96840912,96840514,96840330,96840095,96839825,96839644	Gene ID= ENSG00000163126.14 TPM= 4.78 Transcript Type= NA
chr2	96837914	96844019	96837914	96844019	-	transcript3445.chr2.nic@ANKRD23	transcript3445.chr2.nic	protein_coding	96843966,96842365,96842060,96840787,96840416,96840232,96839997,96837914	96844019,96842511,96842185,96840912,96840514,96840330,96840095,96839825	Gene ID= ENSG00000163126.14 TPM= 6.9 Transcript Type= NA
chr2	96837912	96844034	96837912	96844034	-	ENST00000318357.8@ANKRD23	ENST00000318357.8	protein_coding	96843966,96842365,96842060,96840787,96840416,96840232,96839997,96839727,96837912	96844034,96842511,96842185,96840912,96840514,96840330,96840095,96839825,96839644	Gene ID= ENSG00000163126.14 TPM= 16.99 Transcript Type= protein_coding
chr2	96837914	96844005	96837914	96844005	-	ENST00000418232.5@ANKRD23	ENST00000418232.5	protein_coding	96843966,96842365,96842060,96840787,96840416,96840232,96839997,96839727,96838499,96837914	96844005,96842511,96842185,96840912,96840514,96840330,96840095,96839825,96839644,96838088	Gene ID= ENSG00000163126.14 TPM= 4.25 Transcript Type= protein_coding
chr2	96834313	96836088	96834313	96836088	-	transcript3461.chr2.nnic@NA	transcript3461.chr2.nnic	NA	96834313	96836088	Gene ID= novel_gene_chr2_3462 TPM= 3.19 Transcript Type= NA
chr2	96842393	96858037	96842393	96858037	-	transcript3450.chr2.nic@ANKRD39	transcript3450.chr2.nic	protein_coding	96857888,96854338,96853401,96848269,96842393	96858037,96854441,96853604,96848444,96842511	Gene ID= ENSG00000213337.8 TPM= 5.84 Transcript Type= NA
chr2	96847985	96858095	96847985	96858095	-	ENST00000393537.4@ANKRD39	ENST00000393537.4	protein_coding	96857888,96854338,96853401,96847985	96858095,96854441,96853604,96848444	Gene ID= ENSG00000213337.8 TPM= 16.46 Transcript Type= protein_coding
chr2	96837914	96841625	96837914	96841625	-	transcript3456.chr2.nic@ANKRD39	transcript3456.chr2.nic	protein_coding	96840416,96840232,96837914	96841625,96840330,96840095	Gene ID= ENSG00000213337.8 TPM= 12.75 Transcript Type= NA
chr2	96859742	96869419	96859742	96869419	-	transcript3463.chr2.nnic@SEMA4C	transcript3463.chr2.nnic	protein_coding	96869187,96867778,96866283,96865867,96865666,96865441,96865204,96864964,96864705,96864238,96863926,96863682,96861737,96861579,96859742	96869419,96867923,96866431,96865929,96865764,96865537,96865320,96865115,96864880,96864382,96864148,96863794,96861894,96861649,96861455	Gene ID= ENSG00000168758.10 TPM= 28.68 Transcript Type= NA
chr2	96875885	96907194	96875885	96907194	-	transcript3469.chr2.nnic@FAM178B	transcript3469.chr2.nnic	protein_coding	96906946,96902620,96893926,96878416,96877890,96875885	96907194,96902707,96894051,96878493,96878042,96876308	Gene ID= ENSG00000168754.14 TPM= 3.19 Transcript Type= NA
chr2	97083583	97094839	97083583	97094839	-	ENST00000414820.5@FAHD2B	ENST00000414820.5	protein_coding	97094701,97091863,97091462,97090109,97086139,97085699,97084169,97083948,97083583	97094839,97091988,97091712,97090325,97086198,97085861,97084277,97084035,97083817	Gene ID= ENSG00000144199.11 TPM= 29.21 Transcript Type= protein_coding
chr2	97083583	97094882	97083583	97094882	-	ENST00000272610.3@FAHD2B	ENST00000272610.3	protein_coding	97094701,97091462,97090109,97086139,97085699,97084169,97083948,97083583	97094882,97091712,97090325,97086198,97085861,97084277,97084035,97083817	Gene ID= ENSG00000144199.11 TPM= 15.4 Transcript Type= protein_coding
chr2	97646097	97648191	97646097	97648191	+	ENST00000464949.5@COX5B	ENST00000464949.5	protein_coding	97646097,97646517,97647067,97647344,97647996	97646189,97646666,97647140,97647443,97648191	Gene ID= ENSG00000135940.6 TPM= 14.34 Transcript Type= processed_transcript
chr2	97655963	97664107	97655963	97664107	-	ENST00000289228.6@ACTR1B	ENST00000289228.6	protein_coding	97663843,97661882,97660571,97659352,97658879,97658427,97658224,97657943,97657448,97657152,97655963	97664107,97661946,97660646,97659477,97659003,97658643,97658316,97658117,97657509,97657192,97656960	Gene ID= ENSG00000115073.7 TPM= 62.85 Transcript Type= protein_coding
chr2	97655963	97663904	97655963	97663904	-	transcript3496.chr2.nnic@ACTR1B	transcript3496.chr2.nnic	protein_coding	97663843,97661882,97659352,97658879,97658427,97658224,97657943,97657448,97657152,97655963	97663904,97661946,97659477,97659003,97658643,97658316,97658117,97657509,97657192,97656960	Gene ID= ENSG00000115073.7 TPM= 16.11 Transcript Type= NA
chr2	97655963	97664085	97655963	97664085	-	transcript3500.chr2.nic@ACTR1B	transcript3500.chr2.nic	protein_coding	97663843,97661882,97660571,97659352,97658427,97657943,97657448,97657152,97655963	97664085,97661946,97660646,97659477,97659003,97658316,97657509,97657192,97656960	Gene ID= ENSG00000115073.7 TPM= 11.33 Transcript Type= NA
chr2	97662406	97664130	97662406	97664130	-	transcript3505.chr2.nnic@NA	transcript3505.chr2.nnic	NA	97662406	97664130	Gene ID= novel_gene_chr2_3506 TPM= 2.12 Transcript Type= NA
chr2	97671830	97703056	97671830	97703056	+	transcript3502.chr2.nic@LINC01125	transcript3502.chr2.nic	protein_coding	97671830,97675631,97675845,97690256,97699026,97701154,97702669	97674557,97675721,97675928,97690327,97699136,97701304,97703056	Gene ID= ENSG00000228486.10 TPM= 2.12 Transcript Type= NA
chr2	97732929	97739859	97732929	97739859	+	ENST00000487283.5@ZAP70	ENST00000487283.5	protein_coding	97732929,97733125,97733297,97737473,97737757,97737995,97739375	97733021,97733212,97735456,97737665,97737897,97738107,97739859	Gene ID= ENSG00000115085.13 TPM= 1.06 Transcript Type= retained_intron
chr2	97911408	97995923	97911408	97995923	-	transcript3511.chr2.nnic@TMEM131	transcript3511.chr2.nnic	protein_coding	97995476,97927426,97911408	97995923,97927487,97911671	Gene ID= ENSG00000075568.16 TPM= 2.12 Transcript Type= NA
chr2	97756340	97995891	97756340	97995891	-	ENST00000186436.9@TMEM131	ENST00000186436.9	protein_coding	97995476,97927426,97908658,97888052,97859304,97844145,97841815,97837077,97834775,97834621,97833365,97818613,97815199,97814235,97813971,97812639,97812421,97811128,97809688,97805551,97805376,97805088,97802652,97802428,97801895,97797365,97796844,97796218,97794930,97793395,97792386,97775843,97772297,97766478,97766114,97762035,97760793,97760593,97759652,97758893,97756340	97995891,97927487,97908698,97888120,97859427,97844261,97841937,97837157,97834925,97834677,97833426,97818721,97815307,97814388,97814141,97812749,97812555,97811232,97809774,97805703,97805451,97805205,97802790,97802537,97801961,97797516,97796986,97796404,97795115,97793553,97792984,97776018,97772424,97766602,97766263,97762200,97760914,97760689,97759749,97759053,97757383	Gene ID= ENSG00000075568.16 TPM= 11.68 Transcript Type= protein_coding
chr2	97817529	97820866	97817529	97820866	+	transcript3513.chr2.nnic@NA	transcript3513.chr2.nnic	NA	97817529	97820866	Gene ID= novel_gene_chr2_3514 TPM= 2.12 Transcript Type= NA
chr2	98596996	98598881	98596996	98598881	+	transcript3541.chr2.nnic@NA	transcript3541.chr2.nnic	NA	98596996	98598881	Gene ID= novel_gene_chr2_3542 TPM= 10.62 Transcript Type= NA
chr2	98600353	98608507	98600353	98608507	-	ENST00000483527.5@COA5	ENST00000483527.5	protein_coding	98608263,98604108,98600353	98608507,98604191,98600793	Gene ID= ENSG00000183513.8 TPM= 2.12 Transcript Type= processed_transcript
chr2	98608554	98618515	98608554	98618515	+	transcript3544.chr2.nnic@UNC50	transcript3544.chr2.nnic	protein_coding	98608554,98609643,98610775,98616207,98616432,98618168	98608726,98610039,98610895,98616346,98616533,98618515	Gene ID= ENSG00000115446.11 TPM= 18.06 Transcript Type= NA
chr2	98608579	98618515	98608579	98618515	+	ENST00000409975.5@UNC50	ENST00000409975.5	protein_coding	98608579,98610775,98616207,98616432,98618168	98610039,98610895,98616346,98616533,98618515	Gene ID= ENSG00000115446.11 TPM= 3.19 Transcript Type= protein_coding
chr2	98608579	98618515	98608579	98618515	+	ENST00000357765.6@UNC50	ENST00000357765.6	protein_coding	98608579,98609756,98610775,98616207,98616432,98618168	98608726,98610039,98610895,98616346,98616533,98618515	Gene ID= ENSG00000115446.11 TPM= 27.62 Transcript Type= protein_coding
chr2	98615584	98618508	98615584	98618508	+	transcript3553.chr2.nnic@NA	transcript3553.chr2.nnic	NA	98615584	98618508	Gene ID= novel_gene_chr2_3554 TPM= 2.12 Transcript Type= NA
chr2	98793846	98936259	98793846	98936259	-	ENST00000397899.6@KIAA1211L	ENST00000397899.6	protein_coding	98935938,98846731,98838119,98832862,98832348,98826975,98821857,98797350,98796120,98793846	98936259,98846810,98838287,98832997,98832512,98827169,98823537,98797537,98796264,98794671	Gene ID= ENSG00000196872.11 TPM= 12.75 Transcript Type= protein_coding
chr2	99148264	99154890	99148264	99154890	-	ENST00000465216.1@TSGA10	ENST00000465216.1	protein_coding	99154693,99148264	99154890,99148348	Gene ID= ENSG00000135951.14 TPM= 1.06 Transcript Type= processed_transcript
chr2	99154978	99197432	99154978	99197432	+	transcript3573.chr2.nnic@AC079447.1	transcript3573.chr2.nnic	protein_coding	99154978,99186177,99188177,99194751,99195116,99195573	99155051,99186254,99188257,99194897,99195189,99197432	Gene ID= ENSG00000241962.9 TPM= 3.19 Transcript Type= NA
chr2	99154955	99163157	99154955	99163157	+	ENST00000393473.6@LIPT1	ENST00000393473.6	protein_coding	99154955,99156301,99161957	99155051,99156426,99163157	Gene ID= ENSG00000144182.16 TPM= 2.12 Transcript Type= protein_coding
chr2	99154955	99163148	99154955	99163148	+	ENST00000393471.2@LIPT1	ENST00000393471.2	protein_coding	99154955,99161957	99155051,99163148	Gene ID= ENSG00000144182.16 TPM= 3.19 Transcript Type= protein_coding
chr2	99169263	99181058	99169263	99181058	-	ENST00000289359.6@MITD1	ENST00000289359.6	protein_coding	99180831,99173915,99171510,99171343,99170537,99169550,99169263	99181058,99174016,99171646,99171429,99170652,99169610,99169470	Gene ID= ENSG00000158411.11 TPM= 2.12 Transcript Type= protein_coding
chr2	99181079	99197626	99181079	99197626	+	ENST00000338148.7@MRPL30	ENST00000338148.7	protein_coding	99181079,99186177,99188177,99194751,99195116,99195573	99181249,99186254,99188257,99194897,99195189,99197626	Gene ID= ENSG00000185414.19 TPM= 9.56 Transcript Type= protein_coding
chr2	99318982	99336462	99318982	99336462	-	ENST00000264255.7@TXNDC9	ENST00000264255.7	protein_coding	99336239,99333022,99327535,99321955,99318982	99336462,99333242,99327653,99322209,99319799	Gene ID= ENSG00000115514.11 TPM= 36.11 Transcript Type= protein_coding
chr2	99321534	99336333	99321534	99336333	-	ENST00000409434.5@TXNDC9	ENST00000409434.5	protein_coding	99336239,99333022,99327535,99321534	99336333,99333242,99327653,99322209	Gene ID= ENSG00000115514.11 TPM= 2.12 Transcript Type= protein_coding
chr2	99337353	99401326	99337353	99401326	+	ENST00000289371.10@EIF5B	ENST00000289371.10	protein_coding	99337353,99360236,99360465,99361148,99363645,99364271,99368493,99369392,99371656,99376347,99379019,99379318,99382159,99382780,99389718,99390219,99390544,99392967,99394267,99394509,99394719,99396760,99398748,99399307	99337589,99360361,99360549,99361820,99363862,99364421,99368591,99369481,99371730,99376636,99379126,99379428,99382226,99382921,99389849,99390401,99390705,99393098,99394398,99394585,99394883,99396898,99398909,99401326	Gene ID= ENSG00000158417.10 TPM= 16.99 Transcript Type= protein_coding
chr2	99389608	99400065	99389608	99400065	+	transcript3619.chr2.nic@EIF5B	transcript3619.chr2.nic	protein_coding	99389608,99390219,99390544,99392967,99394267,99394509,99394719,99396760,99398748,99399307	99389849,99390401,99390705,99393098,99394398,99394585,99394883,99396898,99398909,99400065	Gene ID= ENSG00000158417.10 TPM= 6.37 Transcript Type= NA
chr2	99403056	99490017	99403056	99490017	-	transcript3608.chr2.nic@REV1	transcript3608.chr2.nic	protein_coding	99489817,99464922,99462496,99451345,99449336,99442317,99438601,99435834,99434332,99429840,99424152,99421499,99418828,99412731,99410695,99408029,99406325,99405910,99404444,99403695,99403056	99490017,99464985,99462622,99451501,99449504,99442469,99439310,99435941,99434448,99429948,99424280,99421653,99418947,99412951,99410867,99408131,99406490,99406106,99404677,99403815,99403106	Gene ID= ENSG00000135945.9 TPM= 3.9 Transcript Type= NA
chr2	99403056	99490032	99403056	99490032	-	transcript3610.chr2.nic@REV1	transcript3610.chr2.nic	protein_coding	99489817,99464922,99462496,99449336,99442317,99438601,99435834,99434332,99429840,99424152,99421499,99418828,99412731,99410695,99408029,99406325,99405910,99404444,99403695,99403056	99490032,99464985,99462622,99449504,99442469,99439310,99435941,99434448,99429945,99424280,99421653,99418947,99412951,99410867,99408131,99406490,99406106,99404677,99403815,99403106	Gene ID= ENSG00000135945.9 TPM= 16.64 Transcript Type= NA
chr2	99400475	99404879	99400475	99404879	-	transcript3626.chr2.nnic@REV1	transcript3626.chr2.nnic	protein_coding	99404801,99404444,99403695,99402889,99402644,99402244,99400475	99404879,99404677,99403815,99403106,99402800,99402346,99401352	Gene ID= ENSG00000135945.9 TPM= 3.19 Transcript Type= NA
chr2	99437525	99490017	99437525	99490017	-	transcript3631.chr2.nic@REV1	transcript3631.chr2.nic	protein_coding	99489817,99464922,99462496,99449336,99442317,99437525	99490017,99464985,99462622,99449504,99442469,99439310	Gene ID= ENSG00000135945.9 TPM= 2.12 Transcript Type= NA
chr2	99401606	99403648	99401606	99403648	+	transcript3648.chr2.nnic@NA	transcript3648.chr2.nnic	NA	99401606	99403648	Gene ID= novel_gene_chr2_3649 TPM= 3.19 Transcript Type= NA
chr2	99402634	99406627	99402634	99406627	+	transcript3650.chr2.nnic@NA	transcript3650.chr2.nnic	NA	99402634	99406627	Gene ID= novel_gene_chr2_3651 TPM= 2.12 Transcript Type= NA
chr2	100273448	100280503	100273448	100280503	-	transcript3652.chr2.nnic@NA	transcript3652.chr2.nnic	NA	100273448	100280503	Gene ID= novel_gene_chr2_3653 TPM= 24.43 Transcript Type= NA
chr2	100273291	100322733	100273291	100322733	-	ENST00000393437.7@LONRF2	ENST00000393437.7	protein_coding	100321415,100309107,100302921,100300644,100299717,100299226,100298836,100295432,100294229,100290258,100286914,100273291	100322733,100309225,100303043,100300787,100299918,100299319,100298950,100295553,100294387,100290420,100287063,100284492	Gene ID= ENSG00000170500.12 TPM= 9.56 Transcript Type= protein_coding
chr2	100391860	100417656	100391860	100417656	-	ENST00000264249.7@CHST10	ENST00000264249.7	protein_coding	100417374,100415041,100406576,100402564,100397908,100395509,100391860	100417656,100415111,100406707,100402655,100398142,100395614,100393782	Gene ID= ENSG00000115526.10 TPM= 38.24 Transcript Type= protein_coding
chr2	100562969	100577470	100562969	100577470	+	transcript3670.chr2.nnic@PDCL3	transcript3670.chr2.nnic	protein_coding	100562969,100564342,100566503,100568931,100569578,100571590,100576354	100563073,100564459,100566629,100569021,100569721,100571798,100577470	Gene ID= ENSG00000115539.13 TPM= 5.31 Transcript Type= NA
chr2	100562690	100576735	100562690	100576735	+	ENST00000264254.10@PDCL3	ENST00000264254.10	protein_coding	100562690,100566503,100568931,100569578,100571590,100576354	100563073,100566629,100569021,100569721,100571798,100576735	Gene ID= ENSG00000115539.13 TPM= 75.41 Transcript Type= protein_coding
chr2	100820113	100996055	100820113	100996055	+	transcript3675.chr2.nic@NPAS2	transcript3675.chr2.nic	protein_coding	100820113,100904733,100925146,100932910,100937753,100948235,100949367,100964058,100964861,100965660,100968281,100970990,100974803,100975458,100977710,100982231,100988079,100990256,100990780,100993347,100995796	100820414,100904786,100925294,100933001,100937842,100948355,100949480,100964176,100964943,100965766,100968428,100971074,100974944,100975567,100977799,100982377,100988276,100990446,100990872,100993527,100996055	Gene ID= ENSG00000170485.16 TPM= 9.56 Transcript Type= NA
chr2	100820152	100996829	100820152	100996829	+	ENST00000335681.9@NPAS2	ENST00000335681.9	protein_coding	100820152,100904733,100925146,100932910,100937753,100948235,100949367,100964058,100964861,100965660,100968281,100970990,100974803,100975458,100977710,100982231,100988079,100990256,100990780,100993347,100995400	100820414,100904786,100925294,100933001,100937842,100948355,100949480,100964176,100964943,100965766,100968428,100971074,100974944,100975567,100977799,100982377,100988276,100990446,100990872,100993527,100996829	Gene ID= ENSG00000170485.16 TPM= 26.55 Transcript Type= protein_coding
chr2	100969179	100971709	100969179	100971709	-	transcript3683.chr2.nnic@NA	transcript3683.chr2.nnic	NA	100969179	100971709	Gene ID= novel_gene_chr2_3684 TPM= 2.12 Transcript Type= NA
chr2	101001715	101007267	101001715	101007267	+	ENST00000264258.7@RPL31	ENST00000264258.7	protein_coding	101001715,101002702,101004158,101005959,101006350	101002315,101002808,101004283,101006071,101007267	Gene ID= ENSG00000071082.10 TPM= 134.89 Transcript Type= protein_coding
chr2	101002293	101006418	101002293	101006418	+	ENST00000409320.7@RPL31	ENST00000409320.7	protein_coding	101002293,101002702,101004158,101005959	101002315,101002808,101004283,101006418	Gene ID= ENSG00000071082.10 TPM= 2.12 Transcript Type= protein_coding
chr2	101002283	101019728	101002283	101019728	+	ENST00000409028.8@RPL31	ENST00000409028.8	protein_coding	101002283,101002702,101004158,101005959,101018998	101002315,101002808,101004283,101006071,101019728	Gene ID= ENSG00000071082.10 TPM= 1.06 Transcript Type= protein_coding
chr2	101007230	101110032	101007230	101110032	-	transcript3687.chr2.nic@TBC1D8	transcript3687.chr2.nic	protein_coding	101109835,101090254,101059421,101054108,101050401,101040178,101038461,101037532,101036018,101033544,101032268,101029491,101028303,101028048,101027383,101022281,101021681,101011451,101010929,101007230	101110032,101090364,101059539,101054336,101050641,101040385,101038655,101037708,101036168,101033758,101032385,101029776,101028432,101028146,101027451,101022521,101021746,101011540,101011026,101008273	Gene ID= ENSG00000204634.12 TPM= 18.06 Transcript Type= NA
chr2	101010975	101151450	101010975	101151450	-	transcript3694.chr2.nic@TBC1D8	transcript3694.chr2.nic	protein_coding	101151127,101090254,101059421,101054108,101050401,101040178,101038461,101037532,101036018,101033544,101032268,101029491,101028303,101028048,101027383,101022281,101021681,101011451,101010975	101151450,101090364,101059539,101054336,101050641,101040385,101038655,101037708,101036168,101033758,101032385,101029776,101028432,101028146,101027451,101022521,101021746,101011540,101011026	Gene ID= ENSG00000204634.12 TPM= 4.78 Transcript Type= NA
chr2	101007230	101033240	101007230	101033240	-	transcript3699.chr2.nic@TBC1D8	transcript3699.chr2.nic	protein_coding	101029491,101028303,101028048,101027383,101022281,101021681,101011451,101010929,101007230	101033240,101028432,101028146,101027451,101022521,101021746,101011540,101011026,101008273	Gene ID= ENSG00000204634.12 TPM= 9.03 Transcript Type= NA
chr2	101033124	101035240	101033124	101035240	-	transcript3712.chr2.nnic@NA	transcript3712.chr2.nnic	NA	101033124	101035240	Gene ID= novel_gene_chr2_3713 TPM= 3.19 Transcript Type= NA
chr2	101066451	101069016	101066451	101069016	+	transcript3708.chr2.nnic@NA	transcript3708.chr2.nnic	NA	101066451	101069016	Gene ID= novel_gene_chr2_3709 TPM= 3.19 Transcript Type= NA
chr2	101118820	101121814	101118820	101121814	+	transcript3710.chr2.nnic@NA	transcript3710.chr2.nnic	NA	101118820	101121814	Gene ID= novel_gene_chr2_3711 TPM= 4.25 Transcript Type= NA
chr2	101151660	101155412	101151660	101155412	+	ENST00000610202.2@TBC1D8-AS1	ENST00000610202.2	lincRNA	101151660,101154035	101152759,101155412	Gene ID= ENSG00000272902.2 TPM= 2.12 Transcript Type= lincRNA
chr2	101252802	101270316	101252802	101270316	+	ENST00000289382.7@CNOT11	ENST00000289382.7	protein_coding	101252802,101257791,101262539,101264845,101266677,101269040,101269216	101253478,101257955,101262691,101265047,101266879,101269136,101270316	Gene ID= ENSG00000158435.7 TPM= 104.97 Transcript Type= protein_coding
chr2	101252888	101270312	101252888	101270312	+	transcript3722.chr2.nic@CNOT11	transcript3722.chr2.nic	protein_coding	101252888,101257791,101262539,101264845,101266677,101269040	101253478,101257955,101262691,101265047,101266879,101270312	Gene ID= ENSG00000158435.7 TPM= 9.91 Transcript Type= NA
chr2	101252886	101270316	101252886	101270316	+	transcript3724.chr2.nnic@CNOT11	transcript3724.chr2.nnic	protein_coding	101252886,101262539,101264845,101266677,101269040,101269216	101253478,101262691,101265047,101266879,101269136,101270316	Gene ID= ENSG00000158435.7 TPM= 7.25 Transcript Type= NA
chr2	101288231	101308716	101288231	101308716	-	transcript3734.chr2.nic@RNF149	transcript3734.chr2.nic	protein_coding	101308129,101294931,101294014,101288231	101308716,101295181,101294082,101289055	Gene ID= ENSG00000163162.8 TPM= 3.19 Transcript Type= NA
chr2	101271222	101308701	101271222	101308701	-	ENST00000424632.5@RNF149	ENST00000424632.5	protein_coding	101308129,101294931,101294014,101288973,101286081,101281859,101273127,101271222	101308701,101295181,101294082,101289055,101286177,101282057,101273341,101271744	Gene ID= ENSG00000163162.8 TPM= 1.06 Transcript Type= nonsense_mediated_decay
chr2	101381560	101387471	101381560	101387471	-	transcript3737.chr2.nic@CREG2	transcript3737.chr2.nic	protein_coding	101387017,101381560	101387471,101383702	Gene ID= ENSG00000175874.9 TPM= 3.19 Transcript Type= NA
chr2	101697678	101891496	101697678	101891496	+	transcript3742.chr2.nic@MAP4K4	transcript3742.chr2.nic	protein_coding	101697678,101698473,101790720,101823928,101825319,101829504,101831721,101834409,101835900,101839819,101842609,101844101,101855977,101858996,101859643,101860825,101863821,101864930,101866428,101867212,101869622,101870295,101873647,101874082,101877003,101882551,101885187,101887088,101887778,101888796,101891166	101698137,101698538,101790776,101824053,101825429,101829594,101831851,101834463,101835978,101839994,101842681,101844311,101856138,101859082,101859864,101860986,101864051,101865036,101866579,101867309,101869797,101870415,101873764,101874252,101877146,101882685,101885287,101887237,101887937,101888935,101891496	Gene ID= ENSG00000071054.16 TPM= 4.77 Transcript Type= NA
chr2	101697717	101891496	101697717	101891496	+	transcript3745.chr2.nic@MAP4K4	transcript3745.chr2.nic	protein_coding	101697717,101698473,101790720,101823928,101825319,101829504,101831721,101834409,101835900,101839819,101842609,101844101,101855977,101858996,101859643,101863821,101864930,101866428,101867212,101869622,101870295,101871494,101873647,101874082,101877003,101882551,101885187,101887088,101887778,101888796,101891166	101698137,101698538,101790776,101824053,101825429,101829594,101831851,101834463,101835978,101839994,101842681,101844311,101856138,101859082,101859864,101864051,101865036,101866579,101867309,101869797,101870415,101871685,101873764,101874252,101877146,101882685,101885287,101887237,101887937,101888935,101891496	Gene ID= ENSG00000071054.16 TPM= 6.1 Transcript Type= NA
chr2	101697717	101891496	101697717	101891496	+	transcript3752.chr2.nic@MAP4K4	transcript3752.chr2.nic	protein_coding	101697717,101698473,101790720,101823928,101825319,101829504,101831721,101834409,101835900,101839819,101842609,101844101,101855977,101858996,101859643,101863821,101864930,101866428,101867212,101869622,101870295,101873647,101874082,101877003,101882551,101885187,101887088,101887778,101888796,101891166	101698137,101698538,101790776,101824053,101825429,101829594,101831851,101834463,101835978,101839994,101842681,101844311,101856138,101859082,101859864,101864051,101865036,101866579,101867309,101869797,101870415,101873764,101874252,101877146,101882685,101885287,101887237,101887937,101888935,101891496	Gene ID= ENSG00000071054.16 TPM= 5.3 Transcript Type= NA
chr2	101697574	101891496	101697574	101891496	+	transcript3754.chr2.nic@MAP4K4	transcript3754.chr2.nic	protein_coding	101697574,101698473,101790720,101823928,101825319,101829504,101831721,101834409,101835900,101839819,101842609,101844101,101855977,101858996,101859643,101864930,101866428,101867212,101869622,101870295,101871494,101873647,101874082,101877003,101882551,101885187,101887088,101887778,101888796,101891166	101698137,101698538,101790776,101824053,101825429,101829594,101831851,101834463,101835978,101839994,101842681,101844311,101856138,101859082,101859864,101865036,101866579,101867309,101869797,101870415,101871685,101873764,101874252,101877146,101882685,101885287,101887237,101887937,101888935,101891496	Gene ID= ENSG00000071054.16 TPM= 3.44 Transcript Type= NA
chr2	101697703	101891496	101697703	101891496	+	transcript3755.chr2.nic@MAP4K4	transcript3755.chr2.nic	protein_coding	101697703,101698473,101790720,101823928,101825319,101829504,101831721,101834409,101835900,101839819,101842609,101844101,101855977,101858996,101859736,101863821,101864930,101866428,101867212,101869622,101870295,101873647,101874082,101877003,101882551,101885187,101887088,101887778,101888796,101891166	101698137,101698538,101790776,101824053,101825429,101829594,101831851,101834463,101835978,101839994,101842681,101844311,101856138,101859082,101859864,101864051,101865036,101866579,101867309,101869797,101870415,101873764,101874252,101877146,101882685,101885287,101887237,101887937,101888935,101891496	Gene ID= ENSG00000071054.16 TPM= 9.02 Transcript Type= NA
chr2	101697706	101891496	101697706	101891496	+	transcript3759.chr2.nic@MAP4K4	transcript3759.chr2.nic	protein_coding	101697706,101698473,101790720,101823928,101825319,101829504,101831721,101834409,101835900,101839819,101842609,101844101,101855977,101858996,101859643,101864930,101866428,101867212,101869622,101870295,101873647,101874082,101877003,101882551,101885187,101887088,101887778,101888796,101891166	101698137,101698538,101790776,101824053,101825429,101829594,101831851,101834463,101835978,101839994,101842681,101844311,101856138,101859082,101859864,101865036,101866579,101867309,101869797,101870415,101873764,101874252,101877146,101882685,101885287,101887237,101887937,101888935,101891496	Gene ID= ENSG00000071054.16 TPM= 7.96 Transcript Type= NA
chr2	101697744	101891496	101697744	101891496	+	ENST00000425019.5@MAP4K4	ENST00000425019.5	protein_coding	101697744,101698473,101790720,101823928,101825319,101829504,101831721,101834409,101835900,101839819,101842609,101844101,101855977,101858996,101859736,101860825,101864930,101866431,101867212,101869622,101870295,101871494,101873647,101874082,101877003,101882551,101885187,101887088,101887778,101888796,101891166	101698137,101698538,101790776,101824053,101825429,101829594,101831851,101834463,101835978,101839994,101842681,101844311,101856138,101859082,101859864,101860986,101865036,101866579,101867309,101869797,101870415,101871685,101873764,101874252,101877146,101882685,101885287,101887237,101887937,101888935,101891496	Gene ID= ENSG00000071054.16 TPM= 5.43 Transcript Type= protein_coding
chr2	101707859	101709446	101707859	101709446	-	transcript3790.chr2.nnic@NA	transcript3790.chr2.nnic	NA	101707859	101709446	Gene ID= novel_gene_chr2_3791 TPM= 2.12 Transcript Type= NA
chr2	101746292	101747693	101746292	101747693	-	transcript3792.chr2.nnic@NA	transcript3792.chr2.nnic	NA	101746292	101747693	Gene ID= novel_gene_chr2_3793 TPM= 2.12 Transcript Type= NA
chr2	101837101	101839483	101837101	101839483	-	transcript3794.chr2.nnic@NA	transcript3794.chr2.nnic	NA	101837101	101839483	Gene ID= novel_gene_chr2_3795 TPM= 7.44 Transcript Type= NA
chr2	101891880	101892802	101891880	101892802	+	transcript3788.chr2.nnic@NA	transcript3788.chr2.nnic	NA	101891880	101892802	Gene ID= novel_gene_chr2_3789 TPM= 4.25 Transcript Type= NA
chr2	102142786	102179874	102142786	102179874	+	ENST00000410023.5@IL1R1	ENST00000410023.5	protein_coding	102142786,102153941,102157719,102164774,102165115,102166113,102168598,102171801,102172687,102174587,102175478,102176353	102143020,102154017,102157785,102165008,102165304,102166281,102168663,102171918,102172838,102174730,102175645,102179874	Gene ID= ENSG00000115594.11 TPM= 16.99 Transcript Type= protein_coding
chr2	102736908	102817416	102736908	102817416	+	ENST00000409528.5@TMEM182	ENST00000409528.5	protein_coding	102736908,102762587,102764329,102797863,102814748	102737013,102762686,102764427,102798000,102817416	Gene ID= ENSG00000170417.15 TPM= 2.66 Transcript Type= protein_coding
chr2	102761963	102843841	102761963	102843841	+	transcript3820.chr2.nic@TMEM182	transcript3820.chr2.nic	protein_coding	102761963,102762587,102764329,102797863,102843412	102762349,102762686,102764427,102798000,102843841	Gene ID= ENSG00000170417.15 TPM= 9.56 Transcript Type= NA
chr2	102761963	102776621	102761963	102776621	+	transcript3822.chr2.nic@TMEM182	transcript3822.chr2.nic	protein_coding	102761963,102762587,102764329,102775130	102762349,102762686,102764427,102776621	Gene ID= ENSG00000170417.15 TPM= 9.56 Transcript Type= NA
chr2	102762013	102817666	102762013	102817666	+	ENST00000412401.2@TMEM182	ENST00000412401.2	protein_coding	102762013,102762587,102764329,102797863,102814748	102762349,102762686,102764427,102798000,102817666	Gene ID= ENSG00000170417.15 TPM= 64.79 Transcript Type= protein_coding
chr2	105037983	105099960	105037983	105099960	+	ENST00000258455.7@MRPS9	ENST00000258455.7	protein_coding	105037983,105049171,105071313,105071459,105079983,105088984,105089920,105092401,105093530,105097155,105099670	105038227,105049350,105071375,105071489,105080062,105089069,105089995,105092569,105093638,105097324,105099960	Gene ID= ENSG00000135972.8 TPM= 103.03 Transcript Type= protein_coding
chr2	105264414	105329734	105264414	105329734	-	transcript3829.chr2.nnic@TGFBRAP1	transcript3829.chr2.nnic	protein_coding	105329625,105307614,105298511,105296356,105284316,105280382,105277614,105275560,105273544,105272855,105269272,105267217,105264414	105329734,105308318,105298705,105296510,105284398,105280723,105277671,105275703,105273690,105273014,105269705,105267559,105267188	Gene ID= ENSG00000135966.12 TPM= 5.58 Transcript Type= NA
chr2	105264414	105330034	105264414	105330034	-	ENST00000393359.6@TGFBRAP1	ENST00000393359.6	protein_coding	105329625,105307614,105298511,105296356,105284316,105280382,105277614,105275560,105273544,105272855,105269272,105264414	105330034,105308318,105298705,105296510,105284398,105280723,105277671,105275703,105273690,105273014,105269705,105267559	Gene ID= ENSG00000135966.12 TPM= 4.51 Transcript Type= protein_coding
chr2	105296757	105329734	105296757	105329734	-	transcript3837.chr2.nic@TGFBRAP1	transcript3837.chr2.nic	protein_coding	105329625,105307614,105296757	105329734,105308318,105298705	Gene ID= ENSG00000135966.12 TPM= 2.12 Transcript Type= NA
chr2	105337532	105345596	105337532	105345596	+	ENST00000410049.1@C2orf49	ENST00000410049.1	protein_coding	105337532,105339583,105342848,105343101,105345315	105337686,105339749,105342974,105343223,105345596	Gene ID= ENSG00000135974.9 TPM= 2.12 Transcript Type= protein_coding
chr2	105337359	105349211	105337359	105349211	+	ENST00000258457.6@C2orf49	ENST00000258457.6	protein_coding	105337359,105339583,105342848,105345315	105337686,105339749,105343223,105349211	Gene ID= ENSG00000135974.9 TPM= 1.06 Transcript Type= protein_coding
chr2	105360826	105438515	105360826	105438515	-	transcript3861.chr2.nnic@FHL2	transcript3861.chr2.nnic	protein_coding	105438399,105396647,105386361,105373559,105367570,105363285,105360826	105438515,105396697,105386540,105373733,105367739,105363471,105361434	Gene ID= ENSG00000115641.18 TPM= 32.2 Transcript Type= NA
chr2	105360826	105438503	105360826	105438503	-	ENST00000393352.7@FHL2	ENST00000393352.7	protein_coding	105438399,105386361,105373559,105367570,105363285,105360826	105438503,105386540,105373733,105367739,105363471,105361434	Gene ID= ENSG00000115641.18 TPM= 363.07 Transcript Type= protein_coding
chr2	105360826	105399051	105360826	105399051	-	ENST00000393353.7@FHL2	ENST00000393353.7	protein_coding	105398842,105386361,105373559,105367570,105363285,105360826	105399051,105386540,105373733,105367739,105363471,105361434	Gene ID= ENSG00000115641.18 TPM= 66.72 Transcript Type= protein_coding
chr2	105360828	105399061	105360828	105399061	-	ENST00000322142.12@FHL2	ENST00000322142.12	protein_coding	105398970,105396647,105386361,105373559,105367570,105363285,105360828	105399061,105396697,105386540,105373733,105367739,105363471,105361434	Gene ID= ENSG00000115641.18 TPM= 41.02 Transcript Type= protein_coding
chr2	105360861	105399050	105360861	105399050	-	ENST00000408995.5@FHL2	ENST00000408995.5	protein_coding	105398970,105386361,105373559,105367570,105363285,105360861	105399050,105386540,105373733,105367739,105363471,105361434	Gene ID= ENSG00000115641.18 TPM= 28.68 Transcript Type= protein_coding
chr2	105360857	105396957	105360857	105396957	-	ENST00000409807.5@FHL2	ENST00000409807.5	protein_coding	105396647,105386361,105373559,105367570,105363285,105360857	105396957,105386540,105373733,105367739,105363471,105361434	Gene ID= ENSG00000115641.18 TPM= 2.12 Transcript Type= protein_coding
chr2	105367646	105370385	105367646	105370385	+	transcript3888.chr2.nnic@NA	transcript3888.chr2.nnic	NA	105367646	105370385	Gene ID= novel_gene_chr2_3889 TPM= 9.56 Transcript Type= NA
chr2	105397012	105398419	105397012	105398419	-	transcript3900.chr2.nnic@NA	transcript3900.chr2.nnic	NA	105397012	105398419	Gene ID= novel_gene_chr2_3901 TPM= 23.37 Transcript Type= NA
chr2	105401840	105407407	105401840	105407407	+	transcript3892.chr2.nnic@NA	transcript3892.chr2.nnic	NA	105401840	105407407	Gene ID= novel_gene_chr2_3893 TPM= 8.5 Transcript Type= NA
chr2	105409215	105411831	105409215	105411831	+	transcript3890.chr2.nnic@NA	transcript3890.chr2.nnic	NA	105409215	105411831	Gene ID= novel_gene_chr2_3891 TPM= 5.31 Transcript Type= NA
chr2	105420593	105422663	105420593	105422663	+	transcript3894.chr2.nnic@NA	transcript3894.chr2.nnic	NA	105420593	105422663	Gene ID= novel_gene_chr2_3895 TPM= 22.31 Transcript Type= NA
chr2	105744897	105894274	105744897	105894274	+	ENST00000233154.8@NCK2	ENST00000233154.8	protein_coding	105744897,105816430,105855048,105881328,105892982	105745138,105816613,105855289,105882049,105894274	Gene ID= ENSG00000071051.13 TPM= 112.59 Transcript Type= protein_coding
chr2	105855834	105856821	105855834	105856821	-	transcript3921.chr2.nnic@NA	transcript3921.chr2.nnic	NA	105855834	105856821	Gene ID= novel_gene_chr2_3922 TPM= 3.19 Transcript Type= NA
chr2	106093305	106194335	106093305	106194335	-	transcript3926.chr2.nnic@UXS1	transcript3926.chr2.nnic	protein_coding	106194148,106166056,106164736,106163667,106158058,106145190,106129674,106125620,106122970,106112646,106104794,106101058,106098716,106093305	106194335,106166083,106164784,106163710,106158118,106145370,106129778,106125679,106123091,106112765,106104837,106101118,106098773,106094157	Gene ID= ENSG00000115652.14 TPM= 2.47 Transcript Type= NA
chr2	106093308	106194409	106093308	106194409	-	transcript3927.chr2.nnic@UXS1	transcript3927.chr2.nnic	protein_coding	106194148,106166056,106164736,106163667,106158058,106145190,106129674,106122970,106112646,106104794,106101058,106098716,106096718,106093308	106194409,106166083,106164784,106163710,106158118,106145370,106129778,106123091,106112765,106104837,106101118,106098773,106096821,106094157	Gene ID= ENSG00000115652.14 TPM= 2.47 Transcript Type= NA
chr2	106093303	106194339	106093303	106194339	-	ENST00000283148.11@UXS1	ENST00000283148.11	protein_coding	106194148,106166056,106164736,106163667,106158058,106145190,106129674,106125620,106122970,106112646,106104794,106101058,106098716,106096718,106093303	106194339,106166083,106164799,106163710,106158118,106145370,106129778,106125679,106123091,106112765,106104837,106101118,106098773,106096821,106094157	Gene ID= ENSG00000115652.14 TPM= 47.09 Transcript Type= protein_coding
chr2	108448561	108509398	108448561	108509398	+	ENST00000309863.10@GCC2	ENST00000309863.10	protein_coding	108448561,108449633,108451028,108452399,108468980,108469651,108472827,108475535,108475752,108481697,108482287,108483062,108484149,108485636,108485831,108486511,108487699,108489838,108492573,108495291,108496970,108499553,108507560	108449280,108449689,108451112,108452466,108469084,108472116,108472899,108475635,108475850,108481816,108482451,108483166,108484311,108485736,108485908,108486648,108487820,108490014,108492790,108495485,108497109,108499754,108509398	Gene ID= ENSG00000135968.20 TPM= 1.06 Transcript Type= protein_coding
chr2	108534388	108684445	108534388	108684445	+	transcript3949.chr2.nnic@LIMS1	transcript3949.chr2.nnic	protein_coding	108534388,108659605,108670781,108672325,108672880,108675878,108676606,108677979,108680695,108680969,108683885	108534594,108659764,108670847,108672445,108673029,108676028,108676698,108678027,108680770,108681160,108684445	Gene ID= ENSG00000169756.16 TPM= 4.4 Transcript Type= NA
chr2	108654984	108686624	108654984	108686624	+	transcript3955.chr2.nnic@LIMS1	transcript3955.chr2.nnic	protein_coding	108654984,108659605,108670781,108672325,108672880,108675878,108676606,108677979,108680695,108680969,108683885	108655256,108659764,108670847,108672445,108673029,108676028,108676698,108678027,108680770,108681160,108686624	Gene ID= ENSG00000169756.16 TPM= 4.93 Transcript Type= NA
chr2	108534355	108687238	108534355	108687238	+	ENST00000544547.5@LIMS1	ENST00000544547.5	protein_coding	108534355,108659605,108670781,108672325,108672880,108675878,108676606,108677979,108680695,108683885	108534594,108659764,108670847,108672445,108673029,108676028,108676698,108678027,108680770,108687238	Gene ID= ENSG00000169756.16 TPM= 22.99 Transcript Type= protein_coding
chr2	108654812	108684448	108654812	108684448	+	ENST00000338045.7@LIMS1	ENST00000338045.7	protein_coding	108654812,108659605,108670781,108672325,108672880,108675878,108676606,108677979,108680695,108683885	108655256,108659764,108670847,108672445,108673029,108676028,108676698,108678027,108680770,108684448	Gene ID= ENSG00000169756.16 TPM= 2.27 Transcript Type= protein_coding
chr2	108621266	108684448	108621266	108684448	+	ENST00000409441.5@LIMS1	ENST00000409441.5	protein_coding	108621266,108659605,108670781,108672325,108672880,108675878,108676606,108677979,108680695,108683885	108621461,108659764,108670847,108672445,108673029,108676028,108676698,108678027,108680770,108684448	Gene ID= ENSG00000169756.16 TPM= 1.21 Transcript Type= protein_coding
chr2	108663905	108667550	108663905	108667550	+	transcript3962.chr2.nnic@NA	transcript3962.chr2.nnic	NA	108663905	108667550	Gene ID= novel_gene_chr2_3963 TPM= 2.12 Transcript Type= NA
chr2	108764597	108784105	108764597	108784105	+	transcript3964.chr2.nnic@RANBP2	transcript3964.chr2.nnic	protein_coding	108764597,108769260,108771701,108772489,108772868,108775732,108777130,108781269,108782128,108782528,108783596	108768388,108769337,108771871,108772581,108773046,108775936,108777231,108781429,108782401,108782862,108784105	Gene ID= ENSG00000153201.15 TPM= 3.19 Transcript Type= NA
chr2	108719481	108785811	108719481	108785811	+	ENST00000283195.10@RANBP2	ENST00000283195.10	protein_coding	108719481,108729132,108730774,108731322,108735532,108736104,108740489,108746711,108748920,108751264,108751528,108751871,108752998,108753426,108753825,108754905,108755176,108758413,108762101,108763237,108771701,108772489,108772868,108775732,108777130,108781269,108782128,108782528,108783596	108719678,108729199,108730885,108731474,108735762,108736249,108740681,108746798,108749129,108751445,108751703,108751994,108753159,108753563,108753971,108755084,108755259,108758548,108762195,108768388,108771871,108772581,108773046,108775936,108777231,108781429,108782401,108782862,108785811	Gene ID= ENSG00000153201.15 TPM= 5.31 Transcript Type= protein_coding
chr2	109127332	109129617	109127332	109129617	-	transcript3980.chr2.nnic@NA	transcript3980.chr2.nnic	NA	109127332	109129617	Gene ID= novel_gene_chr2_3981 TPM= 4.25 Transcript Type= NA
chr2	109133724	109137737	109133724	109137737	-	transcript3976.chr2.nnic@NA	transcript3976.chr2.nnic	NA	109133724	109137737	Gene ID= novel_gene_chr2_3977 TPM= 4.25 Transcript Type= NA
chr2	109180120	109183640	109180120	109183640	-	transcript3974.chr2.nnic@NA	transcript3974.chr2.nnic	NA	109180120	109183640	Gene ID= novel_gene_chr2_3975 TPM= 3.19 Transcript Type= NA
chr2	109187363	109189662	109187363	109189662	-	transcript3978.chr2.nnic@NA	transcript3978.chr2.nnic	NA	109187363	109189662	Gene ID= novel_gene_chr2_3979 TPM= 2.12 Transcript Type= NA
chr2	109195526	109199333	109195526	109199333	+	transcript3972.chr2.nnic@NA	transcript3972.chr2.nnic	NA	109195526	109199333	Gene ID= novel_gene_chr2_3973 TPM= 3.19 Transcript Type= NA
chr2	109542982	109614206	109542982	109614206	-	ENST00000397712.6@SEPT10	ENST00000397712.6	protein_coding	109613798,109593051,109585721,109585126,109574581,109567815,109565763,109564366,109553087,109546050,109542982	109614206,109593119,109585838,109585321,109574767,109567976,109565859,109564534,109553219,109546237,109544324	Gene ID= ENSG00000186522.14 TPM= 40.36 Transcript Type= protein_coding
chr2	109542987	109614003	109542987	109614003	-	transcript3990.chr2.nnic@SEPT10	transcript3990.chr2.nnic	protein_coding	109613798,109593051,109585721,109585126,109574581,109567815,109565763,109564366,109553087,109542987	109614003,109593119,109585838,109585321,109574767,109567976,109565859,109564534,109553219,109544324	Gene ID= ENSG00000186522.14 TPM= 3.19 Transcript Type= NA
chr2	109544558	109544931	109544558	109544931	+	transcript4001.chr2.nnic@NA	transcript4001.chr2.nnic	NA	109544558	109544931	Gene ID= novel_gene_chr2_4002 TPM= 4.25 Transcript Type= NA
chr2	109614334	109618990	109614334	109618990	+	ENST00000356454.4@SOWAHC	ENST00000356454.4	protein_coding	109614334	109618990	Gene ID= ENSG00000198142.4 TPM= 3.19 Transcript Type= protein_coding
chr2	109794308	109857693	109794308	109857693	+	ENST00000016946.7@RGPD5	ENST00000016946.7	protein_coding	109794308,109801783,109803432,109803979,109808174,109808750,109813460,109819696,109821905,109824222,109824487,109824830,109825876,109826301,109826701,109827792,109828065,109831317,109834997,109835819,109845103,109847810,109855862	109794537,109801850,109803543,109804131,109808404,109808895,109813655,109819783,109822114,109824403,109824662,109824953,109826034,109826438,109826847,109827971,109828148,109831452,109835091,109838042,109845242,109848011,109857693	Gene ID= ENSG00000015568.12 TPM= 7.44 Transcript Type= protein_coding
chr2	110083870	110116566	110083870	110116566	-	ENST00000272462.2@MALL	ENST00000272462.2	protein_coding	110115688,110091603,110087572,110083870	110116566,110091770,110087697,110085757	Gene ID= ENSG00000144063.3 TPM= 33.99 Transcript Type= protein_coding
chr2	110123348	110205017	110123348	110205017	-	ENST00000496524.5@NPHP1	ENST00000496524.5	protein_coding	110204900,110201421,110179624,110178423,110169806,110168452,110165052,110163048,110161603,110160127,110150182,110147916,110146753,110143542,110131679,110123348	110205017,110201494,110179684,110178547,110169998,110168553,110165155,110164730,110161697,110160255,110150256,110148026,110146835,110144569,110131791,110129259	Gene ID= ENSG00000144061.12 TPM= 1.06 Transcript Type= retained_intron
chr2	110123336	110204992	110123336	110204992	-	ENST00000445609.6@NPHP1	ENST00000445609.6	protein_coding	110204900,110201421,110179624,110178423,110169806,110168452,110165052,110164688,110163048,110161603,110160127,110150182,110147916,110146753,110144493,110143542,110131679,110129186,110125637,110123336	110204992,110201494,110179684,110178547,110169998,110168553,110165155,110164730,110163135,110161697,110160255,110150256,110148026,110146835,110144569,110143641,110131791,110129259,110125681,110124063	Gene ID= ENSG00000144061.12 TPM= 2.12 Transcript Type= protein_coding
chr2	110178041	110204999	110178041	110204999	-	ENST00000418527.1@NPHP1	ENST00000418527.1	protein_coding	110204900,110201421,110179624,110178041	110204999,110201494,110179684,110178547	Gene ID= ENSG00000144061.12 TPM= 1.06 Transcript Type= protein_coding
chr2	110211527	110212545	110211527	110212545	-	transcript4016.chr2.nnic@NA	transcript4016.chr2.nnic	NA	110211527	110212545	Gene ID= novel_gene_chr2_4017 TPM= 5.31 Transcript Type= NA
chr2	110211529	110245420	110211529	110245420	-	ENST00000414416.2@LINC00116	ENST00000414416.2	protein_coding	110244988,110222737,110219651,110217659,110216664,110215677,110214786,110212215,110211529	110245420,110222939,110219777,110217788,110216763,110215807,110214957,110212875,110211622	Gene ID= ENSG00000175701.10 TPM= 221.99 Transcript Type= protein_coding
chr2	110386411	110433673	110386411	110433673	-	ENST00000488671.1@AC112229.4	ENST00000488671.1	processed_transcript	110433436,110424053,110423661,110386411	110433673,110424142,110423873,110387397	Gene ID= ENSG00000273471.1 TPM= 1.06 Transcript Type= processed_transcript
chr2	110513812	110531130	110513812	110531130	-	ENST00000463822.1@RGPD6	ENST00000463822.1	protein_coding	110526265,110523496,110513812	110531130,110523697,110515645	Gene ID= ENSG00000183054.11 TPM= 1.06 Transcript Type= retained_intron
chr2	110637698	110678107	110637698	110678107	-	ENST00000535254.5@BUB1	ENST00000535254.5	protein_coding	110677970,110674086,110672661,110670525,110669453,110667797,110667521,110666263,110661582,110659978,110658614,110658410,110657546,110657036,110655739,110653436,110650546,110649234,110642119,110641642,110641307,110641034,110639742,110637698	110678107,110674224,110672857,110670568,110669553,110667849,110667705,110666414,110661841,110660036,110658742,110658520,110657645,110657117,110655916,110653523,110650784,110649377,110642234,110641803,110641464,110641205,110639848,110638159	Gene ID= ENSG00000169679.14 TPM= 1.06 Transcript Type= protein_coding
chr2	111120119	111122481	111120119	111122481	-	transcript4023.chr2.nnic@NA	transcript4023.chr2.nnic	NA	111120119	111122481	Gene ID= novel_gene_chr2_4024 TPM= 14.87 Transcript Type= NA
chr2	111196368	111495054	111196368	111495054	-	transcript4033.chr2.nnic@MIR4435-2HG	transcript4033.chr2.nnic	lincRNA	111494885,111367487,111344061,111248148,111196368	111495054,111367575,111344237,111248241,111197194	Gene ID= ENSG00000172965.14 TPM= 4.25 Transcript Type= NA
chr2	111207776	111495054	111207776	111495054	-	transcript4038.chr2.nic@MIR4435-2HG	transcript4038.chr2.nic	lincRNA	111494885,111367487,111344061,111233628,111207776	111495054,111367575,111344237,111233739,111208661	Gene ID= ENSG00000172965.14 TPM= 3.19 Transcript Type= NA
chr2	111207776	111495054	111207776	111495054	-	transcript4042.chr2.nnic@MIR4435-2HG	transcript4042.chr2.nnic	lincRNA	111494885,111365561,111344061,111207776	111495054,111367575,111344237,111208661	Gene ID= ENSG00000172965.14 TPM= 2.12 Transcript Type= NA
chr2	111343571	111495054	111343571	111495054	-	transcript4043.chr2.nic@MIR4435-2HG	transcript4043.chr2.nic	lincRNA	111494885,111365561,111343571	111495054,111367575,111344237	Gene ID= ENSG00000172965.14 TPM= 5.31 Transcript Type= NA
chr2	111429309	111495086	111429309	111495086	-	ENST00000409569.2@MIR4435-2HG	ENST00000409569.2	lincRNA	111494885,111429309	111495086,111429620	Gene ID= ENSG00000172965.14 TPM= 16.99 Transcript Type= lincRNA
chr2	111297451	111299861	111297451	111299861	-	transcript4046.chr2.nnic@NA	transcript4046.chr2.nnic	NA	111297451	111299861	Gene ID= novel_gene_chr2_4047 TPM= 3.19 Transcript Type= NA
chr2	111493403	111495100	111493403	111495100	-	transcript4048.chr2.nnic@NA	transcript4048.chr2.nnic	NA	111493403	111495100	Gene ID= novel_gene_chr2_4049 TPM= 3.19 Transcript Type= NA
chr2	111767637	111884690	111767637	111884690	-	ENST00000341068.7@ANAPC1	ENST00000341068.7	protein_coding	111883942,111880613,111878810,111873613,111873308,111872630,111868023,111864806,111863675,111862389,111858306,111856796,111856614,111850776,111847725,111847138,111843412,111838438,111834604,111833220,111831286,111825777,111825131,111824966,111822422,111821239,111818840,111815370,111808947,111805802,111803705,111803448,111802428,111800797,111794818,111794233,111794078,111792362,111788234,111785360,111784323,111783897,111782369,111780299,111778675,111776859,111772341,111767637	111884690,111880849,111878971,111873664,111873408,111872712,111868096,111864951,111863895,111862598,111858401,111856886,111856679,111850910,111847865,111847198,111843599,111838512,111834872,111833311,111831434,111825855,111825167,111825036,111822600,111821453,111818958,111815641,111809181,111805893,111803839,111803530,111802506,111800871,111794894,111794323,111794131,111792555,111788320,111785477,111784400,111783964,111782507,111780385,111778770,111777057,111772475,111769406	Gene ID= ENSG00000153107.11 TPM= 5.31 Transcript Type= protein_coding
chr2	111964045	111967619	111964045	111967619	-	transcript4055.chr2.nnic@NA	transcript4055.chr2.nnic	NA	111964045	111967619	Gene ID= novel_gene_chr2_4056 TPM= 2.12 Transcript Type= NA
chr2	112055223	112119318	112055223	112119318	+	ENST00000283206.8@TMEM87B	ENST00000283206.8	protein_coding	112055223,112059977,112064162,112066936,112074912,112077192,112081057,112081335,112086005,112089625,112091712,112097044,112097233,112098595,112100622,112106002,112107788,112112899,112116084	112055756,112060037,112064253,112067067,112074962,112077282,112081118,112081518,112086104,112089718,112091783,112097152,112097291,112098698,112100695,112106075,112107840,112112929,112119318	Gene ID= ENSG00000153214.9 TPM= 2.12 Transcript Type= protein_coding
chr2	112233326	112255116	112233326	112255116	-	transcript4067.chr2.nic@ZC3H8	transcript4067.chr2.nic	protein_coding	112254908,112250191,112238315,112236562,112234120,112233326	112255116,112250272,112238528,112236695,112234236,112233371	Gene ID= ENSG00000144161.12 TPM= 3.19 Transcript Type= NA
chr2	112215865	112255087	112215865	112255087	-	ENST00000272570.9@ZC3H8	ENST00000272570.9	protein_coding	112254908,112250191,112238315,112236562,112234120,112233258,112231838,112230903,112215865	112255087,112250272,112238528,112236695,112234236,112233371,112231945,112230950,112216468	Gene ID= ENSG00000144161.12 TPM= 8.5 Transcript Type= protein_coding
chr2	112275572	112299955	112275572	112299955	+	transcript4071.chr2.nic@ZC3H6	transcript4071.chr2.nic	protein_coding	112275572,112299849	112276026,112299955	Gene ID= ENSG00000188177.13 TPM= 6.37 Transcript Type= NA
chr2	112370092	112433645	112370092	112433645	-	ENST00000302558.7@RGPD8	ENST00000302558.7	protein_coding	112433382,112424240,112422548,112421960,112417684,112417193,112412431,112406297,112403966,112401667,112401408,112401117,112400036,112399632,112399223,112398099,112397922,112394618,112390975,112388024,112380824,112378053,112370092	112433645,112424307,112422659,112422112,112417914,112417338,112412626,112406384,112404175,112401848,112401583,112401240,112400194,112399769,112399369,112398278,112398005,112394753,112391069,112390247,112380963,112378254,112370212	Gene ID= ENSG00000169629.11 TPM= 3.19 Transcript Type= protein_coding
chr2	112541915	112576299	112541915	112576299	+	ENST00000263331.9@POLR1B	ENST00000263331.9	protein_coding	112541915,112547012,112547421,112549267,112550866,112551775,112552645,112557910,112559293,112564366,112567967,112568746,112572562,112573562,112574847	112542671,112547179,112547567,112549399,112551002,112551998,112552816,112558081,112559574,112564499,112568137,112568902,112572758,112573815,112576299	Gene ID= ENSG00000125630.15 TPM= 8.5 Transcript Type= protein_coding
chr2	112584423	112589040	112584423	112589040	+	transcript4095.chr2.nic@CHCHD5	transcript4095.chr2.nic	protein_coding	112584423,112585974,112586200,112588866	112584486,112586114,112586365,112589040	Gene ID= ENSG00000125611.15 TPM= 3.72 Transcript Type= NA
chr2	112584441	112589040	112584441	112589040	+	ENST00000324913.9@CHCHD5	ENST00000324913.9	protein_coding	112584441,112585974,112586200,112588866	112584649,112586114,112586365,112589040	Gene ID= ENSG00000125611.15 TPM= 16.46 Transcript Type= protein_coding
chr2	112584469	112589040	112584469	112589040	+	ENST00000454841.5@CHCHD5	ENST00000454841.5	protein_coding	112584469,112585974,112588866	112584649,112586365,112589040	Gene ID= ENSG00000125611.15 TPM= 1.06 Transcript Type= nonsense_mediated_decay
chr2	112584467	112589040	112584467	112589040	+	transcript4100.chr2.nnic@CHCHD5	transcript4100.chr2.nnic	protein_coding	112584467,112588866	112584649,112589040	Gene ID= ENSG00000125611.15 TPM= 7.44 Transcript Type= NA
chr2	112645024	112645180	112645024	112645180	-	transcript4102.chr2.nnic@NA	transcript4102.chr2.nnic	NA	112645024	112645180	Gene ID= novel_gene_chr2_4103 TPM= 2.12 Transcript Type= NA
chr2	112645857	112663827	112645857	112663827	+	ENST00000272542.7@SLC20A1	ENST00000272542.7	protein_coding	112645857,112646563,112647324,112647653,112652702,112657122,112658825,112659204,112660387,112661142,112662864	112646129,112647162,112647464,112647738,112652798,112657241,112659094,112659762,112660572,112661226,112663827	Gene ID= ENSG00000144136.10 TPM= 15.93 Transcript Type= protein_coding
chr2	113437691	113496189	113437691	113496189	+	ENST00000259199.8@CBWD2	ENST00000259199.8	protein_coding	113437691,113441351,113443767,113444964,113453139,113454741,113460673,113462408,113465129,113471033,113482177,113493757,113493929,113495120,113495637	113438022,113441437,113443863,113445055,113453198,113454778,113460719,113462494,113465173,113471089,113482228,113493825,113493994,113495249,113496189	Gene ID= ENSG00000136682.14 TPM= 54.88 Transcript Type= protein_coding
chr2	113437758	113496171	113437758	113496171	+	transcript4118.chr2.nnic@CBWD2	transcript4118.chr2.nnic	protein_coding	113437758,113441351,113443767,113444964,113453139,113454741,113460673,113462408,113482177,113493757,113493929,113495120,113495637	113438022,113441437,113443863,113445055,113453198,113454778,113460719,113462494,113482228,113493825,113493994,113495249,113496171	Gene ID= ENSG00000136682.14 TPM= 2.84 Transcript Type= NA
chr2	113437791	113496119	113437791	113496119	+	ENST00000358604.7@CBWD2	ENST00000358604.7	protein_coding	113437791,113439020,113441351,113443767,113444964,113453139,113454741,113460673,113462408,113465129,113471033,113482177,113493757,113493929,113495120,113495637	113438022,113439117,113441437,113443863,113445055,113453198,113454778,113460719,113462494,113465173,113471089,113482228,113493825,113493994,113495249,113496119	Gene ID= ENSG00000136682.14 TPM= 6.37 Transcript Type= nonsense_mediated_decay
chr2	113437822	113495799	113437822	113495799	+	ENST00000456188.5@CBWD2	ENST00000456188.5	protein_coding	113437822,113441351,113443767,113444964,113453139,113454741,113457065,113460673,113462408,113465129,113471033,113482177,113493757,113493929,113495120,113495637	113438022,113441437,113443863,113445055,113453198,113454778,113457209,113460719,113462494,113465173,113471089,113482228,113493825,113493994,113495249,113495799	Gene ID= ENSG00000136682.14 TPM= 1.06 Transcript Type= nonsense_mediated_decay
chr2	113437763	113496171	113437763	113496171	+	ENST00000416503.6@CBWD2	ENST00000416503.6	protein_coding	113437763,113441351,113443767,113444964,113453139,113454741,113460673,113462408,113465129,113482177,113493757,113493929,113495120,113495637	113438022,113441437,113443863,113445055,113453198,113454778,113460719,113462494,113465173,113482228,113493825,113493994,113495249,113496171	Gene ID= ENSG00000136682.14 TPM= 2.84 Transcript Type= protein_coding
chr2	113541448	113570517	113541448	113570517	+	transcript4128.chr2.nnic@PGM5P4	transcript4128.chr2.nnic	unprocessed_pseudogene	113541448,113556491,113563136,113568640	113541678,113556580,113563298,113570517	Gene ID= ENSG00000225398.3 TPM= 8.5 Transcript Type= NA
chr2	113541823	113569287	113541823	113569287	+	transcript4130.chr2.nnic@PGM5P4	transcript4130.chr2.nnic	unprocessed_pseudogene	113541823,113556491,113563136,113568640	113542163,113556580,113563298,113569287	Gene ID= ENSG00000225398.3 TPM= 3.19 Transcript Type= NA
chr2	113541471	113543481	113541471	113543481	+	transcript4133.chr2.nnic@NA	transcript4133.chr2.nnic	NA	113541471	113543481	Gene ID= novel_gene_chr2_4134 TPM= 3.19 Transcript Type= NA
chr2	113588550	113599034	113588550	113599034	+	ENST00000453662.6@WASH2P	ENST00000453662.6	transcribed_unprocessed_pseudogene	113588550,113595063,113595369,113595693,113596068,113596381,113596671,113597486,113598398,113598607	113588703,113595161,113595515,113595829,113596203,113596582,113596829,113597638,113598466,113599034	Gene ID= ENSG00000146556.14 TPM= 9.56 Transcript Type= transcribed_unprocessed_pseudogene
chr2	113599028	113603817	113599028	113603817	-	transcript4139.chr2.nnic@DDX11L2	transcript4139.chr2.nnic	unprocessed_pseudogene	113603597,113601212,113599028	113603817,113601431,113600826	Gene ID= ENSG00000236397.3 TPM= 6.37 Transcript Type= NA
chr2	113605871	113627130	113605871	113627130	-	transcript4147.chr2.nnic@RPL23AP7	transcript4147.chr2.nnic	transcribed_processed_pseudogene	113626881,113625609,113605871	113627130,113625729,113612247	Gene ID= ENSG00000240356.6 TPM= 6.37 Transcript Type= NA
chr2	113611567	113627109	113611567	113627109	-	transcript4157.chr2.nnic@RPL23AP7	transcript4157.chr2.nnic	transcribed_processed_pseudogene	113626478,113625609,113611567	113627109,113625729,113612247	Gene ID= ENSG00000240356.6 TPM= 2.12 Transcript Type= NA
chr2	113611684	113627090	113611684	113627090	-	ENST00000391616.3@RPL23AP7	ENST00000391616.3	transcribed_processed_pseudogene	113627038,113625609,113611684	113627090,113625729,113612247	Gene ID= ENSG00000240356.6 TPM= 6.37 Transcript Type= processed_transcript
chr2	113627229	113643396	113627229	113643396	+	ENST00000393167.7@RABL2A	ENST00000393167.7	protein_coding	113627229,113628554,113632915,113634153,113635051,113640894,113641356,113641781,113642031	113627400,113628713,113632944,113634232,113635130,113641005,113641450,113641864,113643396	Gene ID= ENSG00000144134.18 TPM= 5.31 Transcript Type= protein_coding
chr2	113640408	113643389	113640408	113643389	+	ENST00000486403.1@RABL2A	ENST00000486403.1	protein_coding	113640408,113641781,113642031	113641450,113641864,113643389	Gene ID= ENSG00000144134.18 TPM= 1.06 Transcript Type= retained_intron
chr2	113712792	113756823	113712792	113756823	-	ENST00000245680.6@SLC35F5	ENST00000245680.6	protein_coding	113756370,113755454,113755165,113750425,113746277,113743713,113742692,113735777,113734586,113731584,113729401,113725378,113723104,113719154,113717753,113712792	113756823,113755544,113755306,113750568,113746339,113743794,113742879,113735858,113734673,113731648,113729505,113725537,113723194,113719308,113717850,113715195	Gene ID= ENSG00000115084.13 TPM= 9.03 Transcript Type= protein_coding
chr2	113713777	113756613	113713777	113756613	-	transcript4178.chr2.nnic@SLC35F5	transcript4178.chr2.nnic	protein_coding	113756370,113755454,113750425,113746277,113743713,113742692,113735777,113734586,113731584,113729401,113725378,113723104,113719154,113717753,113713777	113756613,113755544,113750568,113746339,113743794,113742879,113735858,113734673,113731648,113729505,113725537,113723194,113719308,113717850,113715195	Gene ID= ENSG00000115084.13 TPM= 2.66 Transcript Type= NA
chr2	113708898	113713768	113708898	113713768	+	transcript4188.chr2.nnic@NA	transcript4188.chr2.nnic	NA	113708898	113713768	Gene ID= novel_gene_chr2_4189 TPM= 86.04 Transcript Type= NA
chr2	117814650	117832379	117814650	117832379	+	ENST00000263239.6@DDX18	ENST00000263239.6	protein_coding	117814650,117817444,117819649,117821161,117821650,117821862,117822147,117824569,117824940,117825447,117826269,117828949,117829289,117830582	117814862,117817728,117819792,117821296,117821750,117822061,117822261,117824708,117825101,117825599,117826382,117829005,117829466,117832379	Gene ID= ENSG00000088205.12 TPM= 19.12 Transcript Type= protein_coding
chr2	117935498	118014143	117935498	118014143	-	transcript4209.chr2.nic@CCDC93	transcript4209.chr2.nic	protein_coding	118013954,118008545,118006722,118000821,117996264,117995446,117985969,117977994,117975188,117974850,117973908,117958365,117952373,117949322,117948105,117946811,117945529,117944024,117941189,117939029,117936702,117935498	118014143,118008658,118006816,118000932,117996362,117995502,117986069,117978030,117975280,117974900,117973994,117958481,117952435,117949395,117948186,117946882,117945582,117944086,117941297,117939111,117936739,117935579	Gene ID= ENSG00000125633.10 TPM= 6.37 Transcript Type= NA
chr2	117985543	118014143	117985543	118014143	-	transcript4213.chr2.nic@CCDC93	transcript4213.chr2.nic	protein_coding	118013954,118008545,118006722,118000821,117996264,117995446,117985543	118014143,118008658,118006816,118000932,117996362,117995502,117986069	Gene ID= ENSG00000125633.10 TPM= 3.19 Transcript Type= NA
chr2	117994320	118014143	117994320	118014143	-	transcript4214.chr2.nic@CCDC93	transcript4214.chr2.nic	protein_coding	118013954,118008545,118006722,118000821,117996264,117994320	118014143,118008658,118006816,118000932,117996362,117995502	Gene ID= ENSG00000125633.10 TPM= 2.12 Transcript Type= NA
chr2	117915478	118014133	117915478	118014133	-	ENST00000376300.6@CCDC93	ENST00000376300.6	protein_coding	118013954,118008545,118006722,118000821,117996264,117995446,117985969,117977994,117975188,117974850,117973908,117958365,117952373,117949322,117948105,117946811,117945529,117944024,117941189,117939029,117936702,117935495,117931037,117915478	118014133,118008658,118006816,118000932,117996362,117995502,117986069,117978030,117975280,117974900,117973994,117958481,117952435,117949395,117948186,117946882,117945582,117944086,117941297,117939111,117936739,117935579,117931150,117920396	Gene ID= ENSG00000125633.10 TPM= 4.25 Transcript Type= protein_coding
chr2	118088474	118110997	118088474	118110997	+	ENST00000485520.5@INSIG2	ENST00000485520.5	protein_coding	118088474,118096419,118103197,118106737,118107090,118108281	118088541,118096426,118103321,118106903,118107189,118110997	Gene ID= ENSG00000125629.14 TPM= 1.06 Transcript Type= processed_transcript
chr2	118088474	118110028	118088474	118110028	+	ENST00000245787.8@INSIG2	ENST00000245787.8	protein_coding	118088474,118096419,118103197,118106737,118107090,118108281	118088541,118096800,118103321,118106903,118107189,118110028	Gene ID= ENSG00000125629.14 TPM= 24.43 Transcript Type= protein_coding
chr2	119223831	119265652	119223831	119265652	+	ENST00000393106.6@STEAP3	ENST00000393106.6	protein_coding	119223831,119239363,119245489,119247679,119254684,119263057	119223888,119239430,119245988,119248206,119254848,119265652	Gene ID= ENSG00000115107.19 TPM= 6.37 Transcript Type= protein_coding
chr2	119260307	119266195	119260307	119266195	-	transcript4230.chr2.nnic@NA	transcript4230.chr2.nnic	NA	119260307	119266195	Gene ID= novel_gene_chr2_4231 TPM= 2.12 Transcript Type= NA
chr2	119302228	119366828	119302228	119366828	-	ENST00000334816.11@C2orf76	ENST00000334816.11	protein_coding	119366790,119339827,119321154,119317466,119311622,119302228	119366828,119339971,119321204,119317503,119311703,119302548	Gene ID= ENSG00000186132.14 TPM= 5.31 Transcript Type= protein_coding
chr2	119366977	119372546	119366977	119372546	+	transcript4238.chr2.nnic@DBI	transcript4238.chr2.nnic	protein_coding	119366977,119367564,119368188,119370740,119372245	119367060,119367644,119368305,119370802,119372546	Gene ID= ENSG00000155368.16 TPM= 9.56 Transcript Type= NA
chr2	119366921	119372560	119366921	119372560	+	ENST00000355857.7@DBI	ENST00000355857.7	protein_coding	119366921,119368188,119370740,119372245	119367060,119368305,119370802,119372560	Gene ID= ENSG00000155368.16 TPM= 301.65 Transcript Type= protein_coding
chr2	119679170	119682118	119679170	119682118	+	ENST00000272521.6@TMEM177	ENST00000272521.6	protein_coding	119679170,119680832	119679276,119682118	Gene ID= ENSG00000144120.12 TPM= 7.44 Transcript Type= protein_coding
chr2	119679167	119682118	119679167	119682118	+	ENST00000401466.5@TMEM177	ENST00000401466.5	protein_coding	119679167,119680832	119679225,119682118	Gene ID= ENSG00000144120.12 TPM= 3.19 Transcript Type= protein_coding
chr2	119679167	119682118	119679167	119682118	+	ENST00000424086.5@TMEM177	ENST00000424086.5	protein_coding	119679167,119680832	119679617,119682118	Gene ID= ENSG00000144120.12 TPM= 3.19 Transcript Type= protein_coding
chr2	119682128	119684368	119682128	119684368	-	transcript4249.chr2.nnic@NA	transcript4249.chr2.nnic	NA	119682128	119684368	Gene ID= novel_gene_chr2_4250 TPM= 4.25 Transcript Type= NA
chr2	119759631	119983818	119759631	119983818	+	ENST00000263708.6@PTPN4	ENST00000263708.6	protein_coding	119759631,119809837,119862536,119877323,119877464,119881786,119882097,119882503,119885795,119900718,119915179,119920069,119926598,119932424,119934800,119945081,119946341,119946518,119951973,119955157,119956844,119957016,119960807,119962616,119965497,119967837,119976984	119760384,119809991,119862643,119877365,119877542,119881830,119882149,119882623,119885882,119900806,119915242,119920241,119926666,119932549,119934958,119945240,119946424,119946574,119952129,119955323,119956934,119957077,119960953,119962744,119965645,119967972,119983818	Gene ID= ENSG00000088179.8 TPM= 2.12 Transcript Type= protein_coding
chr2	119759963	119977461	119759963	119977461	+	transcript4254.chr2.nic@PTPN4	transcript4254.chr2.nic	protein_coding	119759963,119809837,119862536,119877323,119877464,119881786,119882097,119882503,119900718,119915179,119920069,119926598,119932424,119934800,119945081,119946341,119946518,119951973,119955157,119956844,119957016,119960807,119962616,119965497,119967837,119976984	119760384,119809991,119862643,119877365,119877542,119881830,119882149,119882623,119900806,119915242,119920241,119926666,119932549,119934958,119945240,119946424,119946574,119952129,119955323,119956934,119957077,119960953,119962744,119965645,119967972,119977461	Gene ID= ENSG00000088179.8 TPM= 2.12 Transcript Type= NA
chr2	120013005	120179119	120013005	120179119	+	ENST00000263713.9@EPB41L5	ENST00000263713.9	protein_coding	120013005,120019077,120042006,120073178,120074100,120075476,120075701,120076971,120077229,120078493,120087171,120090347,120091555,120093249,120100244,120100699,120127688,120131618,120143003,120146225,120160881,120164836,120167466,120167877,120174841	120013210,120019264,120042110,120073220,120074178,120075520,120075753,120077091,120077316,120078581,120087240,120090516,120091661,120093276,120100286,120100814,120127851,120131715,120143131,120146289,120160974,120164910,120167507,120168007,120179119	Gene ID= ENSG00000115109.13 TPM= 5.31 Transcript Type= protein_coding
chr2	120013029	120105115	120013029	120105115	+	transcript4263.chr2.nnic@EPB41L5	transcript4263.chr2.nnic	protein_coding	120013029,120019077,120042006,120073178,120074100,120075476,120075701,120076971,120077229,120078493,120087171,120090347,120091555,120093249,120100244,120100699,120101635,120104060	120013210,120019264,120042110,120073220,120074178,120075520,120075753,120077091,120077316,120078581,120087240,120090516,120091661,120093276,120100286,120100814,120101719,120105115	Gene ID= ENSG00000115109.13 TPM= 4.25 Transcript Type= NA
chr2	120217478	120223386	120217478	120223386	-	transcript4273.chr2.nnic@NA	transcript4273.chr2.nnic	NA	120217478	120223386	Gene ID= novel_gene_chr2_4274 TPM= 7.44 Transcript Type= NA
chr2	120221278	120223408	120221278	120223408	-	ENST00000426077.2@TMEM185B	ENST00000426077.2	protein_coding	120221278	120223408	Gene ID= ENSG00000226479.3 TPM= 7.44 Transcript Type= protein_coding
chr2	120252758	120294713	120252758	120294713	+	ENST00000272519.9@RALB	ENST00000272519.9	protein_coding	120252758,120278618,120285874,120289580,120293141	120252980,120278778,120286082,120289757,120294713	Gene ID= ENSG00000144118.13 TPM= 244.12 Transcript Type= protein_coding
chr2	120253016	120294713	120253016	120294713	+	transcript4288.chr2.nic@RALB	transcript4288.chr2.nic	protein_coding	120253016,120278615,120285874,120289580,120293141	120253731,120278778,120286082,120289757,120294713	Gene ID= ENSG00000144118.13 TPM= 14.69 Transcript Type= NA
chr2	121337776	121649587	121337776	121649587	-	ENST00000409078.7@CLASP1	ENST00000409078.7	protein_coding	121649372,121605701,121530247,121528677,121527799,121525845,121515665,121503167,121469808,121462532,121461101,121459980,121458840,121457687,121451790,121450913,121448953,121448276,121447337,121430073,121427404,121425139,121410866,121409024,121407471,121404371,121401868,121401509,121398322,121397140,121387763,121387122,121377499,121367588,121365094,121363172,121348512,121347038,121337776	121649587,121606180,121530325,121528780,121527890,121525920,121515762,121503234,121469960,121462605,121461193,121460125,121458975,121457757,121451849,121450990,121449120,121448325,121447507,121430177,121427430,121425306,121410969,121409047,121407715,121404434,121401870,121401672,121398400,121397283,121387906,121387228,121377649,121367831,121365284,121363300,121348718,121347154,121340947	Gene ID= ENSG00000074054.17 TPM= 27.62 Transcript Type= protein_coding
chr2	121444435	121649493	121444435	121649493	-	transcript4297.chr2.nnic@CLASP1	transcript4297.chr2.nnic	protein_coding	121649374,121605701,121530247,121528677,121527799,121525845,121515665,121503167,121469808,121462532,121461101,121459980,121458840,121457687,121451790,121450913,121448953,121448282,121447337,121444435	121649493,121606187,121530327,121528780,121527892,121525920,121515762,121503236,121469960,121462607,121461195,121460125,121458975,121457759,121451849,121450990,121449120,121448325,121447512,121445496	Gene ID= ENSG00000074054.17 TPM= 85.5 Transcript Type= NA
chr2	121500173	121649493	121500173	121649493	-	transcript4298.chr2.nnic@CLASP1	transcript4298.chr2.nnic	protein_coding	121649374,121605701,121530247,121528677,121527799,121525845,121515665,121500173	121649493,121606187,121530327,121528780,121527892,121525920,121515762,121503236	Gene ID= ENSG00000074054.17 TPM= 48.33 Transcript Type= NA
chr2	121371406	121373733	121371406	121373733	-	transcript4301.chr2.nnic@NA	transcript4301.chr2.nnic	NA	121371406	121373733	Gene ID= novel_gene_chr2_4302 TPM= 2.12 Transcript Type= NA
chr2	121650082	121651535	121650082	121651535	+	ENST00000447668.2@NIFK-AS1	ENST00000447668.2	antisense_RNA	121650082,121650468	121650381,121651535	Gene ID= ENSG00000236859.6 TPM= 2.12 Transcript Type= antisense_RNA
chr2	121726945	121736923	121726945	121736923	-	ENST00000285814.8@NIFK	ENST00000285814.8	protein_coding	121736746,121735613,121732096,121730893,121728477,121728288,121726945	121736923,121735750,121732204,121731104,121728536,121728356,121727912	Gene ID= ENSG00000155438.11 TPM= 7.44 Transcript Type= protein_coding
chr2	121755533	121767853	121755533	121767853	+	ENST00000389682.7@TSN	ENST00000389682.7	protein_coding	121755533,121757240,121758710,121761409,121763005,121765134	121755845,121757333,121758806,121761524,121763084,121767853	Gene ID= ENSG00000211460.11 TPM= 29.74 Transcript Type= protein_coding
chr2	121755659	121767294	121755659	121767294	+	ENST00000467324.5@TSN	ENST00000467324.5	protein_coding	121755659,121757240,121758710,121761409,121763005,121765134	121755953,121757333,121758806,121761524,121763084,121767294	Gene ID= ENSG00000211460.11 TPM= 11.68 Transcript Type= nonsense_mediated_decay
chr2	126655844	126696667	126655844	126696667	+	transcript4322.chr2.nnic@GYPC	transcript4322.chr2.nnic	protein_coding	126655844,126675632,126690255,126693864,126695946	126656312,126675749,126690311,126693947,126696667	Gene ID= ENSG00000136732.14 TPM= 8.32 Transcript Type= NA
chr2	126655933	126696670	126655933	126696670	+	ENST00000259254.8@GYPC	ENST00000259254.8	protein_coding	126655933,126690255,126693864,126695946	126656312,126690311,126693947,126696670	Gene ID= ENSG00000136732.14 TPM= 134.18 Transcript Type= protein_coding
chr2	126656184	126696664	126656184	126696664	+	ENST00000409836.3@GYPC	ENST00000409836.3	protein_coding	126656184,126693864,126695946	126656312,126693947,126696664	Gene ID= ENSG00000136732.14 TPM= 29.56 Transcript Type= protein_coding
chr2	126678602	126681792	126678602	126681792	+	transcript4328.chr2.nnic@NA	transcript4328.chr2.nnic	NA	126678602	126681792	Gene ID= novel_gene_chr2_4329 TPM= 2.12 Transcript Type= NA
chr2	127048038	127107278	127048038	127107278	-	ENST00000409400.1@BIN1	ENST00000409400.1	protein_coding	127106860,127076626,127070762,127070553,127069995,127068924,127063933,127063571,127062115,127059011,127051154,127050802,127050421,127048038	127107278,127076706,127070816,127070647,127070090,127069031,127064018,127063646,127062197,127059155,127051243,127050912,127050522,127048633	Gene ID= ENSG00000136717.14 TPM= 12.21 Transcript Type= protein_coding
chr2	127048027	127107288	127048027	127107288	-	ENST00000348750.8@BIN1	ENST00000348750.8	protein_coding	127106860,127076626,127070762,127070553,127069995,127068924,127063933,127063571,127062115,127059011,127050802,127050421,127048027	127107288,127076706,127070816,127070647,127070090,127069031,127064018,127063646,127062197,127059155,127050912,127050522,127048633	Gene ID= ENSG00000136717.14 TPM= 18.59 Transcript Type= protein_coding
chr2	127257297	127294094	127257297	127294094	-	ENST00000445889.5@ERCC3	ENST00000445889.5	protein_coding	127293795,127293513,127292610,127290224,127289689,127289337,127288660,127286703,127280447,127279173,127272865,127271336,127261228,127259296,127257297	127294094,127293718,127292846,127290273,127289824,127289501,127288864,127287017,127280631,127279375,127272961,127271453,127261346,127259448,127257727	Gene ID= ENSG00000163161.12 TPM= 4.78 Transcript Type= nonsense_mediated_decay
chr2	127257290	127294176	127257290	127294176	-	ENST00000285398.6@ERCC3	ENST00000285398.6	protein_coding	127294054,127293513,127292610,127290224,127289689,127289337,127288660,127286703,127280447,127279173,127272865,127271336,127261228,127259296,127257290	127294176,127293718,127292846,127290273,127289824,127289501,127288864,127287017,127280631,127279375,127272961,127271453,127261346,127259448,127257727	Gene ID= ENSG00000163161.12 TPM= 39.83 Transcript Type= protein_coding
chr2	127298667	127303928	127298667	127303928	-	transcript4350.chr2.nnic@NA	transcript4350.chr2.nnic	NA	127298667	127303928	Gene ID= novel_gene_chr2_4351 TPM= 6.37 Transcript Type= NA
chr2	127305931	127387978	127305931	127387978	-	transcript4352.chr2.nnic@MAP3K2	transcript4352.chr2.nnic	protein_coding	127387452,127385505,127343126,127338932,127337738,127335870,127330392,127329921,127326687,127325728,127324174,127323902,127322046,127318169,127317629,127314754,127308585,127305931	127387978,127385573,127343194,127339050,127337778,127335969,127330505,127330008,127326817,127325807,127324241,127323994,127322252,127318317,127317760,127314883,127308762,127307804	Gene ID= ENSG00000169967.16 TPM= 2.66 Transcript Type= NA
chr2	127305931	127388106	127305931	127388106	-	transcript4354.chr2.nic@MAP3K2	transcript4354.chr2.nic	protein_coding	127387452,127343126,127338932,127337738,127335870,127330392,127329921,127326687,127325728,127324174,127323902,127322046,127318169,127317629,127314754,127308585,127305931	127388106,127343194,127339050,127337778,127335969,127330505,127330008,127326817,127325807,127324241,127323994,127322252,127318317,127317760,127314883,127308762,127307804	Gene ID= ENSG00000169967.16 TPM= 19.3 Transcript Type= NA
chr2	127334775	127387975	127334775	127387975	-	transcript4359.chr2.nic@MAP3K2	transcript4359.chr2.nic	protein_coding	127387452,127343126,127338932,127337738,127334775	127387975,127343194,127339050,127337778,127335969	Gene ID= ENSG00000169967.16 TPM= 2.12 Transcript Type= NA
chr2	127388179	127389407	127388179	127389407	+	transcript4361.chr2.nnic@AC068282.1	transcript4361.chr2.nnic	lincRNA	127388179,127388881,127389111	127388311,127388998,127389407	Gene ID= ENSG00000236682.1 TPM= 5.31 Transcript Type= NA
chr2	127387515	127389407	127387515	127389407	+	transcript4363.chr2.nnic@AC068282.1	transcript4363.chr2.nnic	lincRNA	127387515,127389111	127388998,127389407	Gene ID= ENSG00000236682.1 TPM= 2.12 Transcript Type= NA
chr2	127456319	127458287	127456319	127458287	+	transcript4365.chr2.nnic@NA	transcript4365.chr2.nnic	NA	127456319	127458287	Gene ID= novel_gene_chr2_4366 TPM= 2.12 Transcript Type= NA
chr2	127480810	127526512	127480810	127526512	-	transcript4369.chr2.nic@IWS1	transcript4369.chr2.nic	protein_coding	127526175,127523676,127504684,127503387,127502815,127498140,127495998,127494872,127493281,127491971,127489832,127489179,127486553,127485874,127480810	127526512,127523791,127505752,127503576,127502872,127498237,127496148,127494954,127493410,127492088,127489943,127489235,127486664,127486033,127481175	Gene ID= ENSG00000163166.14 TPM= 10.62 Transcript Type= NA
chr2	127498156	127526475	127498156	127526475	-	transcript4373.chr2.nic@IWS1	transcript4373.chr2.nic	protein_coding	127526175,127523676,127506692,127504684,127503387,127502815,127498156	127526475,127523791,127506719,127505752,127503576,127502872,127498237	Gene ID= ENSG00000163166.14 TPM= 2.12 Transcript Type= NA
chr2	127480806	127526468	127480806	127526468	-	ENST00000295321.8@IWS1	ENST00000295321.8	protein_coding	127526175,127523676,127504684,127503387,127502815,127498140,127495998,127494872,127493281,127491971,127489832,127489179,127486553,127480806	127526468,127523791,127505752,127503576,127502872,127498237,127496148,127494954,127493410,127492088,127489943,127489235,127486664,127481175	Gene ID= ENSG00000163166.14 TPM= 24.43 Transcript Type= protein_coding
chr2	127625997	127630467	127625997	127630467	-	transcript4411.chr2.nnic@NA	transcript4411.chr2.nnic	NA	127625997	127630467	Gene ID= novel_gene_chr2_4412 TPM= 11.68 Transcript Type= NA
chr2	127638426	127675116	127638426	127675116	-	transcript4382.chr2.nnic@LIMS2	transcript4382.chr2.nnic	protein_coding	127675014,127657403,127654830,127654424,127652965,127642923,127642049,127640896,127640270,127640070,127638426	127675116,127657562,127654896,127654544,127653225,127643072,127642199,127640988,127640318,127640145,127639428	Gene ID= ENSG00000072163.19 TPM= 7.51 Transcript Type= NA
chr2	127638428	127681786	127638428	127681786	-	ENST00000410011.5@LIMS2	ENST00000410011.5	protein_coding	127681320,127657403,127654830,127654424,127642923,127642049,127640896,127640270,127640070,127638428	127681786,127657562,127654896,127654544,127643072,127642199,127640988,127640318,127640145,127639428	Gene ID= ENSG00000072163.19 TPM= 12.09 Transcript Type= protein_coding
chr2	127638426	127675164	127638426	127675164	-	transcript4395.chr2.nnic@LIMS2	transcript4395.chr2.nnic	protein_coding	127675014,127642923,127642049,127640896,127640270,127640070,127638426	127675164,127643072,127642199,127640988,127640318,127640145,127639428	Gene ID= ENSG00000072163.19 TPM= 15.8 Transcript Type= NA
chr2	127656401	127675114	127656401	127675114	-	transcript4405.chr2.nic@LIMS2	transcript4405.chr2.nic	protein_coding	127675014,127656401	127675114,127657562	Gene ID= ENSG00000072163.19 TPM= 5.31 Transcript Type= NA
chr2	127638428	127675190	127638428	127675190	-	ENST00000355119.8@LIMS2	ENST00000355119.8	protein_coding	127675014,127657403,127654830,127654424,127642923,127642049,127640896,127640270,127640070,127638428	127675190,127657562,127654896,127654544,127643072,127642199,127640988,127640318,127640145,127639428	Gene ID= ENSG00000072163.19 TPM= 99.18 Transcript Type= protein_coding
chr2	127638426	127643228	127638426	127643228	-	ENST00000409286.5@LIMS2	ENST00000409286.5	protein_coding	127642923,127642049,127640896,127640270,127640070,127638426	127643228,127642199,127640988,127640318,127640145,127639428	Gene ID= ENSG00000072163.19 TPM= 12.62 Transcript Type= protein_coding
chr2	127638426	127664546	127638426	127664546	-	ENST00000324938.9@LIMS2	ENST00000324938.9	protein_coding	127664306,127657403,127654830,127654424,127642923,127642049,127640896,127640270,127640070,127638426	127664546,127657562,127654896,127654544,127643072,127642199,127640988,127640318,127640145,127639428	Gene ID= ENSG00000072163.19 TPM= 16.02 Transcript Type= protein_coding
chr2	127666727	127668709	127666727	127668709	+	transcript4409.chr2.nnic@NA	transcript4409.chr2.nnic	NA	127666727	127668709	Gene ID= novel_gene_chr2_4410 TPM= 74.35 Transcript Type= NA
chr2	127669098	127671444	127669098	127671444	+	transcript4407.chr2.nnic@NA	transcript4407.chr2.nnic	NA	127669098	127671444	Gene ID= novel_gene_chr2_4408 TPM= 20.18 Transcript Type= NA
chr2	127721911	127811157	127721911	127811157	-	transcript4415.chr2.nic@WDR33	transcript4415.chr2.nic	protein_coding	127811012,127770778,127768933,127768189,127765174,127764828,127763062,127726651,127725061,127724887,127724333,127723253,127722958,127722591,127721911	127811157,127771004,127769001,127768293,127765269,127764979,127763159,127726777,127725215,127724965,127724443,127723347,127723044,127722730,127721988	Gene ID= ENSG00000136709.11 TPM= 2.12 Transcript Type= NA
chr2	127701509	127703831	127701509	127703831	+	transcript4420.chr2.nnic@NA	transcript4420.chr2.nnic	NA	127701509	127703831	Gene ID= novel_gene_chr2_4421 TPM= 15.93 Transcript Type= NA
chr2	127843553	127858073	127843553	127858073	-	transcript4424.chr2.nnic@POLR2D	transcript4424.chr2.nnic	protein_coding	127858028,127852925,127850590,127846221,127843553	127858073,127853105,127850685,127848185,127844735	Gene ID= ENSG00000144231.10 TPM= 3.72 Transcript Type= NA
chr2	127843551	127858157	127843551	127858157	-	ENST00000272645.8@POLR2D	ENST00000272645.8	protein_coding	127858028,127852925,127850590,127843551	127858157,127853105,127850685,127848185	Gene ID= ENSG00000144231.10 TPM= 7.97 Transcript Type= protein_coding
chr2	127846266	127858136	127846266	127858136	-	transcript4434.chr2.nnic@POLR2D	transcript4434.chr2.nnic	protein_coding	127858028,127850590,127846266	127858136,127850685,127848185	Gene ID= ENSG00000144231.10 TPM= 3.19 Transcript Type= NA
chr2	127861932	127863498	127861932	127863498	-	transcript4443.chr2.nnic@NA	transcript4443.chr2.nnic	NA	127861932	127863498	Gene ID= novel_gene_chr2_4444 TPM= 2.12 Transcript Type= NA
chr2	127941217	128027295	127941217	128027295	-	ENST00000357702.9@SAP130	ENST00000357702.9	protein_coding	128027092,128026181,128017680,128016389,128014803,128013030,128010269,128000307,128000056,127999741,127996350,127993187,127989564,127986785,127977985,127954986,127950160,127949869,127945456,127942424,127941217	128027295,128026298,128017915,128016547,128014914,128013154,128010393,128000454,128000146,127999845,127996491,127993308,127989866,127986962,127978089,127955344,127950408,127949994,127945559,127942537,127942164	Gene ID= ENSG00000136715.17 TPM= 4.25 Transcript Type= protein_coding
chr2	128091311	128195677	128091311	128195677	+	ENST00000259253.10@UGGT1	ENST00000259253.10	protein_coding	128091311,128097429,128103932,128107938,128109634,128113084,128115124,128116265,128120356,128121199,128123186,128127361,128129029,128133141,128134876,128138717,128143094,128145803,128152784,128155489,128156392,128157252,128159514,128160460,128161138,128164730,128170288,128171205,128172573,128173781,128174773,128176814,128177832,128178468,128179786,128180890,128182130,128183675,128186683,128187449,128189717	128091415,128097564,128104014,128108068,128109746,128113258,128115220,128116343,128120456,128121298,128123246,128127452,128129179,128133260,128134961,128138852,128143225,128145967,128152904,128155587,128156415,128157346,128159720,128160591,128161268,128164825,128170390,128171284,128172762,128173939,128174858,128176898,128177920,128178569,128179870,128181072,128182290,128183789,128186799,128187614,128195677	Gene ID= ENSG00000136731.12 TPM= 3.19 Transcript Type= protein_coding
chr2	128231669	128233645	128231669	128233645	-	transcript4449.chr2.nnic@NA	transcript4449.chr2.nnic	NA	128231669	128233645	Gene ID= novel_gene_chr2_4450 TPM= 2.12 Transcript Type= NA
chr2	130139287	130145134	130139287	130145134	-	ENST00000310463.10@CCDC74B	ENST00000310463.10	protein_coding	130144747,130143269,130142133,130141158,130140179,130140023,130139891,130139287	130145134,130143313,130142381,130141296,130140371,130140096,130139947,130139690	Gene ID= ENSG00000152076.18 TPM= 1.06 Transcript Type= protein_coding
chr2	130151408	130181601	130151408	130181601	-	ENST00000351288.10@SMPD4	ENST00000351288.10	protein_coding	130181530,130176554,130174914,130173514,130173279,130172787,130172625,130172349,130167458,130164374,130157251,130156585,130156035,130155096,130154277,130153702,130153319,130153043,130151408	130181601,130176637,130175000,130173656,130173354,130172895,130172677,130172500,130167590,130164445,130157396,130156675,130156135,130155259,130154482,130153935,130153450,130153171,130152884	Gene ID= ENSG00000136699.19 TPM= 18.06 Transcript Type= protein_coding
chr2	130163936	130165135	130163936	130165135	+	transcript4468.chr2.nnic@NA	transcript4468.chr2.nnic	NA	130163936	130165135	Gene ID= novel_gene_chr2_4469 TPM= 5.31 Transcript Type= NA
chr2	130181737	130190713	130181737	130190713	+	ENST00000425361.5@MZT2B	ENST00000425361.5	protein_coding	130181737,130182627,130190469	130181797,130182775,130190713	Gene ID= ENSG00000152082.13 TPM= 11.68 Transcript Type= protein_coding
chr2	130182257	130190712	130182257	130190712	+	ENST00000409255.1@MZT2B	ENST00000409255.1	protein_coding	130182257,130182627,130183787,130190469	130182452,130182775,130183966,130190712	Gene ID= ENSG00000152082.13 TPM= 13.28 Transcript Type= protein_coding
chr2	130182313	130190729	130182313	130190729	+	ENST00000455239.1@MZT2B	ENST00000455239.1	protein_coding	130182313,130190469	130182452,130190729	Gene ID= ENSG00000152082.13 TPM= 15.4 Transcript Type= protein_coding
chr2	130182555	130190727	130182555	130190727	+	ENST00000480182.1@MZT2B	ENST00000480182.1	protein_coding	130182555,130190469	130182775,130190727	Gene ID= ENSG00000152082.13 TPM= 11.15 Transcript Type= retained_intron
chr2	130229342	130232121	130229342	130232121	+	transcript4471.chr2.nnic@NA	transcript4471.chr2.nnic	NA	130229342	130232121	Gene ID= novel_gene_chr2_4472 TPM= 13.81 Transcript Type= NA
chr2	130231355	130232106	130231355	130232106	+	ENST00000450578.1@NOC2LP1	ENST00000450578.1	transcribed_processed_pseudogene	130231355	130232106	Gene ID= ENSG00000213225.7 TPM= 3.19 Transcript Type= processed_transcript
chr2	130338243	130342349	130338243	130342349	-	ENST00000442217.5@CCDC115	ENST00000442217.5	protein_coding	130342015,130341841,130341667,130340908,130339560,130338243	130342349,130341944,130341749,130341039,130339762,130339232	Gene ID= ENSG00000136710.9 TPM= 9.56 Transcript Type= nonsense_mediated_decay
chr2	130338241	130342349	130338241	130342349	-	ENST00000259229.6@CCDC115	ENST00000259229.6	protein_coding	130342015,130341841,130341667,130340908,130338241	130342349,130341944,130341749,130341039,130339232	Gene ID= ENSG00000136710.9 TPM= 27.62 Transcript Type= protein_coding
chr2	130342225	130346624	130342225	130346624	+	ENST00000259239.7@IMP4	ENST00000259239.7	protein_coding	130342225,130343086,130344629,130345376,130345567,130345779,130346018,130346201,130346356	130342935,130343194,130344712,130345485,130345699,130345933,130346112,130346274,130346624	Gene ID= ENSG00000136718.9 TPM= 43.55 Transcript Type= protein_coding
chr2	130342922	130347810	130342922	130347810	+	ENST00000460766.5@IMP4	ENST00000460766.5	protein_coding	130342922,130344629,130345376,130345567,130345779,130346018,130346201,130346356	130343194,130344712,130345485,130345699,130345933,130346112,130346274,130347810	Gene ID= ENSG00000136718.9 TPM= 9.56 Transcript Type= retained_intron
chr2	131034811	131047253	131034811	131047253	+	transcript4498.chr2.nic@ARHGEF4	transcript4498.chr2.nic	protein_coding	131034811,131038853,131040016,131040261,131041230,131041815,131043452,131044299,131045369,131046038	131035288,131039032,131040192,131040440,131041462,131041944,131043583,131044542,131045446,131047253	Gene ID= ENSG00000136002.18 TPM= 15.93 Transcript Type= NA
chr2	131047876	131093457	131047876	131093457	-	transcript4503.chr2.nnic@FAM168B	transcript4503.chr2.nnic	protein_coding	131093214,131091809,131082577,131071855,131055553,131055272,131052891,131047876	131093457,131091963,131082657,131071938,131055695,131055449,131053015,131052452	Gene ID= ENSG00000152102.17 TPM= 4.25 Transcript Type= NA
chr2	131047876	131093428	131047876	131093428	-	ENST00000409185.5@FAM168B	ENST00000409185.5	protein_coding	131093332,131082577,131071855,131055553,131055272,131052891,131047876	131093428,131082657,131071938,131055695,131055449,131053015,131052452	Gene ID= ENSG00000152102.17 TPM= 78.6 Transcript Type= protein_coding
chr2	131072317	131075288	131072317	131075288	+	transcript4509.chr2.nnic@NA	transcript4509.chr2.nnic	NA	131072317	131075288	Gene ID= novel_gene_chr2_4510 TPM= 2.12 Transcript Type= NA
chr2	131483960	131492422	131483960	131492422	-	ENST00000309451.6@MZT2A	ENST00000309451.6	protein_coding	131492207,131491876,131483960	131492422,131492024,131484218	Gene ID= ENSG00000173272.15 TPM= 129.58 Transcript Type= protein_coding
chr2	131479295	131482934	131479295	131482934	+	transcript4520.chr2.nic@TUBA3D	transcript4520.chr2.nic	protein_coding	131479295,131480069,131482552	131479456,131480749,131482934	Gene ID= ENSG00000075886.10 TPM= 5.31 Transcript Type= NA
chr2	131527833	131533666	131527833	131533666	+	ENST00000295171.10@CCDC74A	ENST00000295171.10	protein_coding	131527833,131529647,131530579,131531664,131532589,131532864,131533013,131533269	131528220,131529691,131530827,131531802,131532781,131532937,131533069,131533666	Gene ID= ENSG00000163040.14 TPM= 3.19 Transcript Type= protein_coding
chr2	131682511	131722806	131682511	131722806	+	transcript4529.chr2.nnic@C2orf27A	transcript4529.chr2.nnic	transcribed_unprocessed_pseudogene	131682511,131684709,131686064,131686330,131688166,131722417	131682988,131684819,131686211,131686441,131688303,131722806	Gene ID= ENSG00000197927.12 TPM= 2.12 Transcript Type= NA
chr2	132644853	132670209	132644853	132670209	-	transcript4530.chr2.nic@LYPD1	transcript4530.chr2.nic	protein_coding	132669847,132668400,132644853	132670209,132668537,132646280	Gene ID= ENSG00000150551.10 TPM= 2.12 Transcript Type= NA
chr2	132644853	132670205	132644853	132670205	-	ENST00000397463.2@LYPD1	ENST00000397463.2	protein_coding	132669881,132668400,132644853	132670205,132668537,132646280	Gene ID= ENSG00000150551.10 TPM= 1.06 Transcript Type= protein_coding
chr2	132782153	132785111	132782153	132785111	-	transcript4532.chr2.nnic@NA	transcript4532.chr2.nnic	NA	132782153	132785111	Gene ID= novel_gene_chr2_4533 TPM= 3.19 Transcript Type= NA
chr2	133800099	133801898	133800099	133801898	+	transcript4543.chr2.nnic@NA	transcript4543.chr2.nnic	NA	133800099	133801898	Gene ID= novel_gene_chr2_4544 TPM= 10.62 Transcript Type= NA
chr2	133825690	133829830	133825690	133829830	+	transcript4539.chr2.nnic@NA	transcript4539.chr2.nnic	NA	133825690	133829830	Gene ID= novel_gene_chr2_4540 TPM= 4.25 Transcript Type= NA
chr2	133831124	133833735	133831124	133833735	+	transcript4545.chr2.nnic@NA	transcript4545.chr2.nnic	NA	133831124	133833735	Gene ID= novel_gene_chr2_4546 TPM= 11.68 Transcript Type= NA
chr2	133839396	133840661	133839396	133840661	+	transcript4541.chr2.nnic@NA	transcript4541.chr2.nnic	NA	133839396	133840661	Gene ID= novel_gene_chr2_4542 TPM= 4.25 Transcript Type= NA
chr2	133916352	133920968	133916352	133920968	+	transcript4547.chr2.nnic@NA	transcript4547.chr2.nnic	NA	133916352	133920968	Gene ID= novel_gene_chr2_4548 TPM= 8.5 Transcript Type= NA
chr2	133935717	133939514	133935717	133939514	-	transcript4549.chr2.nnic@NA	transcript4549.chr2.nnic	NA	133935717	133939514	Gene ID= novel_gene_chr2_4550 TPM= 2.12 Transcript Type= NA
chr2	133985523	133986311	133985523	133986311	-	transcript4551.chr2.nnic@NA	transcript4551.chr2.nnic	NA	133985523	133986311	Gene ID= novel_gene_chr2_4552 TPM= 2.12 Transcript Type= NA
chr2	134122111	134126158	134122111	134126158	-	transcript4558.chr2.nnic@NA	transcript4558.chr2.nnic	NA	134122111	134126158	Gene ID= novel_gene_chr2_4559 TPM= 2.12 Transcript Type= NA
chr2	134159558	134164849	134159558	134164849	+	transcript4556.chr2.nnic@NA	transcript4556.chr2.nnic	NA	134159558	134164849	Gene ID= novel_gene_chr2_4557 TPM= 3.19 Transcript Type= NA
chr2	134918825	134959342	134918825	134959342	+	ENST00000264157.9@CCNT2	ENST00000264157.9	protein_coding	134918825,134919810,134936841,134939002,134942612,134946101,134947736,134952641,134953230	134919012,134919891,134936969,134939062,134942674,134946146,134947899,134952711,134959342	Gene ID= ENSG00000082258.12 TPM= 2.12 Transcript Type= protein_coding
chr2	134918825	134957017	134918825	134957017	+	ENST00000295238.10@CCNT2	ENST00000295238.10	protein_coding	134918825,134919810,134936841,134939002,134942612,134946101,134947736,134952641,134953230,134954481	134919012,134919891,134936969,134939062,134942674,134946146,134947899,134952711,134954379,134957017	Gene ID= ENSG00000082258.12 TPM= 4.25 Transcript Type= protein_coding
chr2	135052265	135170706	135052265	135170706	+	ENST00000264158.12@RAB3GAP1	ENST00000264158.12	protein_coding	135052265,135052430,135058011,135090998,135093615,135113151,135115216,135120819,135124165,135126181,135126583,135129995,135130552,135132895,135133861,135135265,135135564,135150369,135153649,135162555,135162748,135162986,135164594,135168545	135052325,135052485,135058086,135091130,135093693,135113270,135115381,135120918,135124246,135126249,135126656,135130087,135130721,135132984,135134033,135135319,135135932,135150506,135153876,135162651,135162851,135163101,135164696,135170706	Gene ID= ENSG00000115839.17 TPM= 1.06 Transcript Type= protein_coding
chr2	135052298	135169989	135052298	135169989	+	ENST00000442034.5@RAB3GAP1	ENST00000442034.5	protein_coding	135052298,135052430,135058011,135090998,135093615,135113151,135115216,135120819,135124165,135126181,135126583,135129995,135130552,135132895,135133861,135135265,135135564,135150369,135153649,135162555,135162748,135162986,135164594,135167693,135168545	135052325,135052485,135058086,135091130,135093693,135113270,135115381,135120918,135124246,135126249,135126656,135130087,135130721,135132984,135134033,135135319,135135932,135150506,135153876,135162651,135162851,135163101,135164696,135167713,135169989	Gene ID= ENSG00000115839.17 TPM= 14.87 Transcript Type= protein_coding
chr2	135061005	135062204	135061005	135062204	-	transcript4593.chr2.nnic@NA	transcript4593.chr2.nnic	NA	135061005	135062204	Gene ID= novel_gene_chr2_4594 TPM= 14.87 Transcript Type= NA
chr2	135741660	135770625	135741660	135770625	+	transcript4609.chr2.nic@UBXN4	transcript4609.chr2.nic	protein_coding	135741660,135748267,135753539,135754159,135755517,135761818,135769769,135770571	135742011,135748369,135753567,135754277,135755691,135761911,135769823,135770625	Gene ID= ENSG00000144224.16 TPM= 15.93 Transcript Type= NA
chr2	135741619	135785055	135741619	135785055	+	ENST00000272638.13@UBXN4	ENST00000272638.13	protein_coding	135741619,135748267,135753539,135754159,135755517,135761818,135769769,135770571,135772420,135776249,135778948,135780183,135782749	135742011,135748369,135753567,135754277,135755691,135761911,135769823,135770735,135772547,135776351,135779079,135780385,135785055	Gene ID= ENSG00000144224.16 TPM= 63.73 Transcript Type= protein_coding
chr2	135840443	135876487	135840443	135876487	-	transcript4615.chr2.nnic@MCM6	transcript4615.chr2.nnic	protein_coding	135876259,135872697,135870251,135868611,135866563,135866132,135865013,135862607,135859301,135857897,135856728,135852787,135851402,135848053,135846237,135840443	135876487,135872843,135870361,135868860,135866728,135866277,135865163,135862748,135859442,135858004,135856883,135852915,135851563,135848188,135846392,135840951	Gene ID= ENSG00000076003.4 TPM= 2.12 Transcript Type= NA
chr2	135907244	135985689	135907244	135985689	-	transcript4622.chr2.nnic@DARS	transcript4622.chr2.nnic	protein_coding	135985403,135983397,135961396,135943378,135933910,135932783,135924387,135922784,135920453,135916226,135914469,135912486,135911382,135911139,135907244	135985689,135983454,135961498,135943480,135933990,135932842,135924498,135922918,135920600,135916372,135914511,135912566,135911493,135911210,135907407	Gene ID= ENSG00000115866.10 TPM= 3.19 Transcript Type= NA
chr2	135911382	135985525	135911382	135985525	-	transcript4623.chr2.nic@DARS	transcript4623.chr2.nic	protein_coding	135985403,135983397,135979274,135961396,135943378,135933910,135932783,135924387,135922784,135920453,135916226,135914469,135912486,135911382	135985525,135983454,135979366,135961498,135943480,135933990,135932842,135924498,135922918,135920600,135916372,135914511,135912566,135911493	Gene ID= ENSG00000115866.10 TPM= 4.25 Transcript Type= NA
chr2	135906677	135985684	135906677	135985684	-	ENST00000264161.8@DARS	ENST00000264161.8	protein_coding	135985403,135983397,135979274,135961396,135943378,135933910,135932783,135924387,135922784,135920453,135916226,135914469,135912486,135911382,135911139,135906677	135985684,135983454,135979366,135961498,135943480,135933990,135932842,135924498,135922918,135920600,135916372,135914511,135912566,135911493,135911210,135907407	Gene ID= ENSG00000115866.10 TPM= 33.99 Transcript Type= protein_coding
chr2	135917926	135919319	135917926	135919319	-	transcript4626.chr2.nnic@NA	transcript4626.chr2.nnic	NA	135917926	135919319	Gene ID= novel_gene_chr2_4627 TPM= 2.12 Transcript Type= NA
chr2	136114351	136118165	136114351	136118165	-	ENST00000241393.3@CXCR4	ENST00000241393.3	protein_coding	136118046,136114351	136118165,136115912	Gene ID= ENSG00000121966.6 TPM= 4.25 Transcript Type= protein_coding
chr2	137964310	138016364	137964310	138016364	+	ENST00000280097.4@HNMT	ENST00000280097.4	protein_coding	137964310,137970165,138000918,138002064,138005132,138013775	137964628,137970217,138001025,138002194,138005225,138016364	Gene ID= ENSG00000150540.13 TPM= 10.62 Transcript Type= protein_coding
chr2	137964473	137967444	137964473	137967444	+	ENST00000280096.5@HNMT	ENST00000280096.5	protein_coding	137964473,137967097	137964628,137967444	Gene ID= ENSG00000150540.13 TPM= 2.12 Transcript Type= protein_coding
chr2	140231423	142131701	140231423	142131701	-	ENST00000389484.7@LRP1B	ENST00000389484.7	protein_coding	142130648,141810279,141480396,141254522,141247226,141229183,141188421,141062051,141058883,141055116,141048986,141019922,141015696,141013556,141005335,140993995,140989532,140982160,140951860,140950235,140922965,140907877,140902920,140886138,140883817,140868099,140867590,140851652,140850102,140840918,140839991,140813657,140776098,140770881,140769213,140716682,140715973,140702427,140702141,140701721,140700250,140601450,140598631,140541779,140540973,140536581,140534021,140526237,140525844,140516889,140514653,140509928,140506796,140502963,140501687,140495565,140492608,140487617,140485343,140475138,140457463,140456455,140450568,140444563,140444330,140442504,140385893,140378180,140373008,140371179,140370710,140364661,140358821,140357979,140356342,140352953,140350797,140335615,140334453,140325762,140323893,140321963,140314935,140297808,140274424,140270242,140247086,140239442,140238152,140234786,140231423	142131701,141810401,141480533,141254641,141247354,141229440,141188583,141062273,141059054,141055259,141049222,141020102,141015915,141013745,141005457,140994135,140989657,140982276,140951940,140950402,140923147,140908077,140903165,140886335,140884021,140868263,140867834,140851783,140850329,140841092,140840085,140813806,140776238,140771006,140769344,140716816,140716102,140702553,140702292,140701845,140700621,140601639,140598835,140541971,140541098,140536709,140534140,140526350,140525993,140517011,140514772,140510056,140506918,140503103,140501874,140495748,140492693,140487739,140485524,140475337,140457651,140456603,140450661,140444679,140444449,140442623,140386009,140378286,140373137,140371285,140370842,140364783,140358946,140358116,140356476,140353072,140351038,140335838,140334559,140325878,140324066,140322088,140315099,140297969,140274598,140270346,140247162,140239532,140238296,140234884,140233326	Gene ID= ENSG00000168702.17 TPM= 1.06 Transcript Type= protein_coding
chr2	143946033	144332582	143946033	144332582	-	transcript4645.chr2.nic@GTDC1	transcript4645.chr2.nic	protein_coding	144332439,144235676,144211515,144208603,144145572,144141882,144007182,143970653,143957195,143952773,143951982,143946033	144332582,144235737,144211579,144208804,144145739,144142055,144007535,143970762,143957339,143952843,143952073,143947135	Gene ID= ENSG00000121964.14 TPM= 6.37 Transcript Type= NA
chr2	143946033	144332521	143946033	144332521	-	transcript4647.chr2.nic@GTDC1	transcript4647.chr2.nic	protein_coding	144332439,144235676,144211515,144208603,144145572,144141882,144007182,143970653,143952773,143951982,143946033	144332521,144235737,144211579,144208804,144145739,144142055,144007535,143970762,143952843,143952073,143947135	Gene ID= ENSG00000121964.14 TPM= 2.12 Transcript Type= NA
chr2	143946016	144332534	143946016	144332534	-	ENST00000542155.5@GTDC1	ENST00000542155.5	protein_coding	144332439,144235676,144211515,144208603,144145572,144141882,144007182,143970653,143957195,143952773,143951982,143946016	144332534,144235737,144211597,144208804,144145739,144142055,144007535,143970762,143957339,143952843,143952073,143947135	Gene ID= ENSG00000121964.14 TPM= 8.5 Transcript Type= protein_coding
chr2	144384839	144385932	144384839	144385932	-	transcript4652.chr2.nnic@NA	transcript4652.chr2.nnic	NA	144384839	144385932	Gene ID= novel_gene_chr2_4653 TPM= 2.12 Transcript Type= NA
chr2	144384081	144520395	144384081	144520395	-	ENST00000627532.2@ZEB2	ENST00000627532.2	protein_coding	144519939,144517278,144429769,144424796,144404836,144403916,144401199,144398301,144396412,144384081	144520395,144517419,144430026,144424867,144405024,144404130,144401307,144400270,144396592,144390028	Gene ID= ENSG00000169554.18 TPM= 14.87 Transcript Type= protein_coding
chr2	144511391	144514451	144511391	144514451	-	ENST00000625161.1@ZEB2	ENST00000625161.1	protein_coding	144511391	144514451	Gene ID= ENSG00000169554.18 TPM= 1.06 Transcript Type= retained_intron
chr2	147930397	148021604	147930397	148021604	-	ENST00000264169.6@ORC4	ENST00000264169.6	protein_coding	148021448,147975902,147973448,147972739,147958791,147958298,147955347,147952373,147948051,147943436,147939140,147938298,147938146,147930397	148021604,147975975,147973524,147972829,147958866,147958383,147955395,147952524,147948224,147943522,147939248,147938393,147938213,147935698	Gene ID= ENSG00000115947.13 TPM= 2.12 Transcript Type= protein_coding
chr2	147930397	148020737	147930397	148020737	-	ENST00000540442.5@ORC4	ENST00000540442.5	protein_coding	148020633,147973448,147972739,147958791,147958298,147955347,147952373,147948051,147943436,147939140,147938298,147938146,147930397	148020737,147973524,147972829,147958866,147958383,147955395,147952524,147948224,147943522,147939248,147938393,147938213,147935698	Gene ID= ENSG00000115947.13 TPM= 1.06 Transcript Type= protein_coding
chr2	148021156	148071225	148021156	148071225	+	transcript4677.chr2.nic@MBD5	transcript4677.chr2.nic	protein_coding	148021156,148054391,148070873	148021684,148054449,148071225	Gene ID= ENSG00000204406.12 TPM= 2.12 Transcript Type= NA
chr2	148021156	148025559	148021156	148025559	+	transcript4680.chr2.nnic@NA	transcript4680.chr2.nnic	NA	148021156	148025559	Gene ID= novel_gene_chr2_4681 TPM= 2.12 Transcript Type= NA
chr2	148061305	148063813	148061305	148063813	-	transcript4684.chr2.nnic@NA	transcript4684.chr2.nnic	NA	148061305	148063813	Gene ID= novel_gene_chr2_4685 TPM= 2.12 Transcript Type= NA
chr2	148296866	148299813	148296866	148299813	-	transcript4682.chr2.nnic@NA	transcript4682.chr2.nnic	NA	148296866	148299813	Gene ID= novel_gene_chr2_4683 TPM= 5.31 Transcript Type= NA
chr2	148021011	148516971	148021011	148516971	+	ENST00000407073.5@MBD5	ENST00000407073.5	protein_coding	148021011,148021648,148178700,148233245,148342214,148458203,148462582,148463739,148468341,148483110,148485742,148489386,148502436,148510060,148512870	148021046,148021684,148178793,148233395,148342336,148458871,148462684,148463919,148470461,148483436,148485950,148490594,148502509,148510135,148516971	Gene ID= ENSG00000204406.12 TPM= 1.06 Transcript Type= protein_coding
chr2	148458630	148513548	148458630	148513548	+	ENST00000404807.5@MBD5	ENST00000404807.5	protein_coding	148458630,148462582,148463739,148468341,148483110,148485742,148489386,148502436,148510060,148512870	148458871,148462684,148463919,148470461,148484135,148485950,148490594,148502509,148510135,148513548	Gene ID= ENSG00000204406.12 TPM= 1.06 Transcript Type= protein_coding
chr2	149569634	149587816	149569634	149587816	-	ENST00000303319.9@MMADHC	ENST00000303319.9	protein_coding	149587664,149587089,149582127,149579431,149576437,149575711,149571085,149569634	149587816,149587149,149582271,149579648,149576542,149575841,149571171,149570168	Gene ID= ENSG00000168288.12 TPM= 121.62 Transcript Type= protein_coding
chr2	149577403	149578928	149577403	149578928	+	transcript4699.chr2.nnic@NA	transcript4699.chr2.nnic	NA	149577403	149578928	Gene ID= novel_gene_chr2_4700 TPM= 2.12 Transcript Type= NA
chr2	150468195	150487667	150468195	150487667	-	ENST00000375734.6@RND3	ENST00000375734.6	protein_coding	150487268,150486694,150474875,150471627,150468195	150487667,150486781,150474984,150471761,150470238	Gene ID= ENSG00000115963.13 TPM= 46.92 Transcript Type= protein_coding
chr2	150468195	150487694	150468195	150487694	-	ENST00000263895.8@RND3	ENST00000263895.8	protein_coding	150487549,150487268,150486694,150474875,150471627,150468195	150487694,150487455,150486781,150474984,150471761,150470238	Gene ID= ENSG00000115963.13 TPM= 36.29 Transcript Type= protein_coding
chr2	150468209	150485382	150468209	150485382	-	ENST00000409557.5@RND3	ENST00000409557.5	protein_coding	150485286,150474875,150471627,150468209	150485382,150474984,150471761,150470238	Gene ID= ENSG00000115963.13 TPM= 6.02 Transcript Type= protein_coding
chr2	151270465	151289621	151270465	151289621	-	transcript4704.chr2.nic@NMI	transcript4704.chr2.nic	protein_coding	151289593,151288891,151282868,151281948,151278828,151275758,151275484,151271626,151270465	151289621,151289077,151282954,151282043,151278990,151275864,151275670,151271732,151270875	Gene ID= ENSG00000123609.10 TPM= 2.12 Transcript Type= NA
chr2	151270465	151290057	151270465	151290057	-	ENST00000243346.9@NMI	ENST00000243346.9	protein_coding	151289593,151282868,151281948,151278828,151275758,151275484,151271626,151270465	151290057,151282954,151282043,151278990,151275864,151275670,151271732,151270875	Gene ID= ENSG00000123609.10 TPM= 11.68 Transcript Type= protein_coding
chr2	151357592	151380048	151357592	151380048	+	ENST00000243347.4@TNFAIP6	ENST00000243347.4	protein_coding	151357592,151363943,151366056,151370020,151373549,151379364	151357760,151364080,151366217,151370248,151373589,151380048	Gene ID= ENSG00000123610.4 TPM= 4.25 Transcript Type= protein_coding
chr2	151409886	151475388	151409886	151475388	+	ENST00000428287.6@RIF1	ENST00000428287.6	protein_coding	151409886,151410414,151411260,151414823,151416561,151416807,151420190,151422950,151428784,151433077,151435463,151436827,151437241,151438684,151440027,151441905,151443259,151443529,151445338,151446426,151451606,151454895,151456578,151457761,151458811,151460000,151461138,151462242,151462412,151462884,151468000,151468641,151469711,151473964,151474857	151409939,151410527,151411338,151414919,151416688,151416901,151420379,151423042,151428922,151433228,151435580,151437003,151437351,151438746,151440127,151441991,151443329,151443709,151445445,151446575,151451705,151455159,151456620,151457963,151458910,151460119,151461289,151462322,151462466,151466120,151468146,151468756,151469864,151474072,151475388	Gene ID= ENSG00000080345.17 TPM= 1.06 Transcript Type= protein_coding
chr2	151409941	151482172	151409941	151482172	+	ENST00000243326.9@RIF1	ENST00000243326.9	protein_coding	151409941,151411260,151414823,151416561,151416807,151420190,151422950,151428784,151433077,151435463,151436827,151437241,151438684,151440027,151441905,151443259,151443529,151445338,151446426,151451606,151454895,151456578,151457761,151458811,151460000,151461138,151462242,151462412,151462884,151468000,151468474,151468641,151469711,151473964,151474857	151410527,151411338,151414919,151416688,151416901,151420379,151423042,151428922,151433228,151435580,151437003,151437351,151438746,151440127,151441991,151443329,151443709,151445445,151446575,151451705,151455159,151456620,151457963,151458910,151460119,151461289,151462322,151462466,151466120,151468146,151468551,151468756,151469864,151474072,151482172	Gene ID= ENSG00000080345.17 TPM= 1.06 Transcript Type= protein_coding
chr2	151485339	151490392	151485339	151490392	-	transcript4712.chr2.nic@NEB	transcript4712.chr2.nic	protein_coding	151490372,151489971,151485339	151490392,151490077,151485933	Gene ID= ENSG00000183091.19 TPM= 2.12 Transcript Type= NA
chr2	151826220	151828437	151826220	151828437	-	transcript4732.chr2.nnic@ARL5A	transcript4732.chr2.nnic	protein_coding	151828131,151826220	151828437,151827799	Gene ID= ENSG00000162980.16 TPM= 2.12 Transcript Type= NA
chr2	151796765	151797977	151796765	151797977	-	transcript4735.chr2.nnic@NA	transcript4735.chr2.nnic	NA	151796765	151797977	Gene ID= novel_gene_chr2_4736 TPM= 2.12 Transcript Type= NA
chr2	151797461	151798717	151797461	151798717	+	transcript4733.chr2.nnic@NA	transcript4733.chr2.nnic	NA	151797461	151798717	Gene ID= novel_gene_chr2_4734 TPM= 41.42 Transcript Type= NA
chr2	152672565	152718278	152672565	152718278	-	transcript4761.chr2.nic@PRPF40A	transcript4761.chr2.nic	protein_coding	152717356,152715995,152694542,152693038,152690962,152681226,152679352,152679056,152677451,152676405,152673598,152672978,152672565	152718278,152716126,152694622,152693068,152690978,152681336,152679472,152679109,152677475,152676779,152673706,152673042,152672623	Gene ID= ENSG00000196504.15 TPM= 10.62 Transcript Type= NA
chr2	152672565	152717407	152672565	152717407	-	ENST00000545856.5@PRPF40A	ENST00000545856.5	protein_coding	152717230,152715995,152694542,152693038,152690962,152681226,152679352,152679056,152677451,152676405,152673598,152672978,152672565	152717407,152716126,152694622,152693068,152690978,152681336,152679472,152679109,152677475,152676779,152673706,152673042,152672623	Gene ID= ENSG00000196504.15 TPM= 5.31 Transcript Type= protein_coding
chr2	152717893	152760764	152717893	152760764	+	ENST00000495469.5@ARL6IP6	ENST00000495469.5	protein_coding	152717893,152720533,152734994,152759747	152717995,152720586,152735126,152760764	Gene ID= ENSG00000177917.10 TPM= 4.25 Transcript Type= processed_transcript
chr2	156324432	156332716	156324432	156332716	-	ENST00000339562.8@NR4A2	ENST00000339562.8	protein_coding	156332480,156330668,156329323,156328404,156327851,156326718,156326150,156324432	156332716,156330791,156330188,156328533,156328014,156326920,156326328,156326000	Gene ID= ENSG00000153234.13 TPM= 1.06 Transcript Type= protein_coding
chr2	156340973	156342259	156340973	156342259	+	transcript4769.chr2.nnic@NA	transcript4769.chr2.nnic	NA	156340973	156342259	Gene ID= novel_gene_chr2_4770 TPM= 4.25 Transcript Type= NA
chr2	156435441	156586403	156435441	156586403	+	ENST00000310454.10@GPD2	ENST00000310454.10	protein_coding	156435441,156476098,156496044,156510796,156512220,156513333,156549608,156550602,156557389,156568825,156569363,156570087,156571134,156578889,156579086,156579690,156582793	156435804,156476207,156496215,156510920,156512317,156513496,156549772,156550746,156557582,156568959,156569538,156570218,156571292,156579001,156579164,156579788,156586403	Gene ID= ENSG00000115159.15 TPM= 4.25 Transcript Type= protein_coding
chr2	157736449	157876104	157736449	157876104	-	transcript4775.chr2.nic@ACVR1	transcript4775.chr2.nic	protein_coding	157875796,157826528,157818385,157799427,157780337,157778131,157774088,157770368,157765921,157760880,157738440,157736449	157876104,157826646,157818559,157799500,157780600,157778342,157774187,157770514,157766196,157761077,157738570,157737665	Gene ID= ENSG00000115170.13 TPM= 4.57 Transcript Type= NA
chr2	157736449	157876347	157736449	157876347	-	transcript4776.chr2.nnic@ACVR1	transcript4776.chr2.nnic	protein_coding	157875796,157860033,157818385,157799427,157780337,157778131,157774088,157770368,157765921,157760880,157738440,157736449	157876347,157860179,157818559,157799500,157780600,157778342,157774187,157770514,157766196,157761077,157738570,157737665	Gene ID= ENSG00000115170.13 TPM= 4.57 Transcript Type= NA
chr2	157736449	157876203	157736449	157876203	-	transcript4777.chr2.nnic@ACVR1	transcript4777.chr2.nnic	protein_coding	157875796,157818269,157799427,157780337,157778131,157774088,157770368,157765921,157760880,157738440,157736449	157876203,157818559,157799500,157780600,157778342,157774187,157770514,157766196,157761077,157738570,157737665	Gene ID= ENSG00000115170.13 TPM= 5.1 Transcript Type= NA
chr2	157736449	157875805	157736449	157875805	-	transcript4778.chr2.nnic@ACVR1	transcript4778.chr2.nnic	protein_coding	157875742,157818385,157799427,157780337,157778131,157774088,157770368,157765921,157760880,157738440,157736449	157875805,157818559,157799500,157780600,157778342,157774187,157770514,157766196,157761077,157738570,157737665	Gene ID= ENSG00000115170.13 TPM= 4.57 Transcript Type= NA
chr2	157736449	157875862	157736449	157875862	-	ENST00000434821.5@ACVR1	ENST00000434821.5	protein_coding	157875796,157818385,157799427,157780337,157778131,157774088,157770368,157765921,157760880,157738440,157736449	157875862,157818559,157799500,157780600,157778342,157774187,157770514,157766196,157761077,157738570,157737665	Gene ID= ENSG00000115170.13 TPM= 5.63 Transcript Type= protein_coding
chr2	157876452	157878564	157876452	157878564	+	transcript4782.chr2.nnic@NA	transcript4782.chr2.nnic	NA	157876452	157878564	Gene ID= novel_gene_chr2_4783 TPM= 4.25 Transcript Type= NA
chr2	158456845	158663003	158456845	158663003	+	transcript4786.chr2.nic@PKP4	transcript4786.chr2.nic	protein_coding	158456845,158533180,158577271,158603070,158620990,158621231,158624878,158631753,158634070,158640627,158642486,158658131,158661333,158662897	158457218,158533316,158577383,158603104,158621121,158621421,158625427,158631941,158634289,158640759,158642699,158658314,158661450,158663003	Gene ID= ENSG00000144283.21 TPM= 10.62 Transcript Type= NA
chr2	158458229	158459466	158458229	158459466	+	transcript4791.chr2.nnic@NA	transcript4791.chr2.nnic	NA	158458229	158459466	Gene ID= novel_gene_chr2_4792 TPM= 2.12 Transcript Type= NA
chr2	158795317	158815993	158795317	158815993	+	ENST00000309950.7@DAPL1	ENST00000309950.7	protein_coding	158795317,158804282,158807055,158815705	158795430,158804369,158807115,158815993	Gene ID= ENSG00000163331.11 TPM= 1.06 Transcript Type= protein_coding
chr2	158968610	159232659	158968610	159232659	+	transcript4800.chr2.nnic@TANC1	transcript4800.chr2.nnic	protein_coding	158968610,159001080,159065896,159097637,159136194,159163283,159169250,159170524,159172121,159174953,159176352,159178556,159185791,159186902,159194257,159196608,159198975,159217497,159219238,159219692,159224232,159225688,159227819,159228796,159229578	158968782,159001189,159065971,159097834,159136298,159163546,159169372,159170805,159172272,159175184,159176518,159179163,159185899,159187024,159194493,159196793,159199053,159217630,159219361,159219867,159224364,159225779,159227965,159228896,159232659	Gene ID= ENSG00000115183.14 TPM= 7.44 Transcript Type= NA
chr2	158968610	159091803	158968610	159091803	+	transcript4811.chr2.nnic@TANC1	transcript4811.chr2.nnic	protein_coding	158968610,159001080,159065896,159076475,159089584	158968782,159001189,159065971,159076528,159091803	Gene ID= ENSG00000115183.14 TPM= 7.79 Transcript Type= NA
chr2	158968610	159136807	158968610	159136807	+	transcript4813.chr2.nic@TANC1	transcript4813.chr2.nic	protein_coding	158968610,159001080,159065896,159097637,159136194	158968782,159001189,159065971,159097834,159136807	Gene ID= ENSG00000115183.14 TPM= 3.19 Transcript Type= NA
chr2	158968610	159091803	158968610	159091803	+	transcript4814.chr2.nnic@TANC1	transcript4814.chr2.nnic	protein_coding	158968610,159001080,159065896,159089584	158968782,159001189,159065971,159091803	Gene ID= ENSG00000115183.14 TPM= 43.37 Transcript Type= NA
chr2	158968610	159099508	158968610	159099508	+	transcript4816.chr2.nic@TANC1	transcript4816.chr2.nic	protein_coding	158968610,159001080,159065896,159097637	158968782,159001189,159065971,159099508	Gene ID= ENSG00000115183.14 TPM= 9.56 Transcript Type= NA
chr2	158968619	159091803	158968619	159091803	+	transcript4819.chr2.nnic@TANC1	transcript4819.chr2.nnic	protein_coding	158968619,159065896,159089584	158968782,159065971,159091803	Gene ID= ENSG00000115183.14 TPM= 6.19 Transcript Type= NA
chr2	158968669	159005786	158968669	159005786	+	transcript4821.chr2.nic@TANC1	transcript4821.chr2.nic	protein_coding	158968669,159001080	158968782,159005786	Gene ID= ENSG00000115183.14 TPM= 4.25 Transcript Type= NA
chr2	158968671	159232659	158968671	159232659	+	ENST00000263635.7@TANC1	ENST00000263635.7	protein_coding	158968671,159001080,159065896,159097637,159136194,159149142,159150370,159163283,159169250,159170524,159172121,159174953,159176352,159178556,159185791,159186902,159194257,159196608,159198975,159217497,159219238,159219692,159224232,159225688,159227819,159228796,159229578	158968782,159001189,159065971,159097834,159136298,159149272,159150556,159163546,159169372,159170805,159172272,159175184,159176518,159179163,159185899,159187024,159194493,159196793,159199053,159217630,159219361,159219867,159224364,159225779,159227965,159228896,159232659	Gene ID= ENSG00000115183.14 TPM= 23.37 Transcript Type= protein_coding
chr2	159133346	159135985	159133346	159135985	-	transcript4826.chr2.nnic@NA	transcript4826.chr2.nnic	NA	159133346	159135985	Gene ID= novel_gene_chr2_4827 TPM= 3.19 Transcript Type= NA
chr2	159235793	159286799	159235793	159286799	-	ENST00000359774.8@WDSUB1	ENST00000359774.8	protein_coding	159286583,159282672,159279761,159275546,159271702,159259810,159257945,159257758,159256196,159248372,159235793	159286799,159283093,159279945,159275638,159271795,159259843,159257985,159257864,159256375,159248512,159236190	Gene ID= ENSG00000196151.10 TPM= 9.56 Transcript Type= protein_coding
chr2	159235798	159286703	159235798	159286703	-	ENST00000358147.8@WDSUB1	ENST00000358147.8	protein_coding	159286583,159282672,159279761,159275546,159256196,159248372,159235798	159286703,159283093,159279945,159275638,159256375,159248512,159236190	Gene ID= ENSG00000196151.10 TPM= 1.06 Transcript Type= protein_coding
chr2	159382607	159615596	159382607	159615596	-	transcript4842.chr2.nic@BAZ2B	transcript4842.chr2.nic	protein_coding	159615394,159555823,159478575,159453613,159448242,159446782,159439009,159438303,159432757,159430863,159429200,159428311,159427941,159412335,159405022,159404849,159400599,159398829,159397345,159397074,159395769,159389345,159386353,159385155,159383606,159382607	159615596,159555865,159478721,159453801,159448409,159446975,159439212,159438695,159433363,159431156,159429260,159428419,159428042,159412545,159405114,159404910,159400664,159398894,159397389,159397100,159395834,159389485,159386607,159385369,159383680,159382802	Gene ID= ENSG00000123636.17 TPM= 2.47 Transcript Type= NA
chr2	159398843	159615596	159398843	159615596	-	transcript4846.chr2.nic@BAZ2B	transcript4846.chr2.nic	protein_coding	159615394,159555823,159478575,159453613,159448242,159446782,159439009,159438303,159432757,159430863,159429200,159428311,159427941,159412335,159405022,159404903,159404849,159400599,159398843	159615596,159555865,159478721,159453801,159448409,159446975,159439212,159438695,159433363,159431156,159429260,159428419,159428042,159412545,159405114,159404910,159404901,159400664,159398894	Gene ID= ENSG00000123636.17 TPM= 2.47 Transcript Type= NA
chr2	159400599	159615596	159400599	159615596	-	transcript4853.chr2.nic@BAZ2B	transcript4853.chr2.nic	protein_coding	159615394,159555823,159478575,159453613,159448242,159446782,159439009,159438303,159432757,159430863,159429200,159428311,159412335,159405022,159404903,159404849,159400599	159615596,159555865,159478721,159453801,159448409,159446975,159439212,159438695,159433363,159431156,159429260,159428419,159412545,159405114,159404910,159404901,159400664	Gene ID= ENSG00000123636.17 TPM= 2.47 Transcript Type= NA
chr2	159321740	159322031	159321740	159322031	+	transcript4899.chr2.nnic@NA	transcript4899.chr2.nnic	NA	159321740	159322031	Gene ID= novel_gene_chr2_4900 TPM= 2.12 Transcript Type= NA
chr2	159615296	159617082	159615296	159617082	+	ENST00000418474.1@AC009506.1	ENST00000418474.1	antisense_RNA	159615296,159615747	159615453,159617082	Gene ID= ENSG00000224152.1 TPM= 5.31 Transcript Type= antisense_RNA
chr2	159712508	159768573	159712508	159768573	+	transcript4867.chr2.nnic@MARCH7	transcript4867.chr2.nnic	protein_coding	159712508,159714557,159729009,159743061,159745770,159747805,159752402,159759226,159762880,159764626,159767284	159712606,159714598,159729175,159743253,159745937,159748903,159752571,159759335,159762993,159764674,159768573	Gene ID= ENSG00000136536.14 TPM= 7.01 Transcript Type= NA
chr2	159712251	159768573	159712251	159768573	+	transcript4868.chr2.nic@MARCH7	transcript4868.chr2.nic	protein_coding	159712251,159729009,159743061,159745770,159747805,159752402,159759226,159762880,159764626,159767284	159712661,159729175,159743253,159745937,159748903,159752571,159759335,159762993,159764674,159768573	Gene ID= ENSG00000136536.14 TPM= 78.18 Transcript Type= NA
chr2	159712506	159768583	159712506	159768583	+	transcript4876.chr2.nic@MARCH7	transcript4876.chr2.nic	protein_coding	159712506,159729009,159743061,159745770,159747805,159752402,159759226,159762880,159767284	159712661,159729175,159743253,159745937,159748903,159752571,159759335,159762993,159768583	Gene ID= ENSG00000136536.14 TPM= 9.13 Transcript Type= NA
chr2	159768853	159798242	159768853	159798242	-	ENST00000259053.5@CD302	ENST00000259053.5	protein_coding	159798132,159783359,159780882,159780005,159777938,159768853	159798242,159783469,159780998,159780178,159777964,159772053	Gene ID= ENSG00000241399.6 TPM= 4.25 Transcript Type= protein_coding
chr2	159945815	160062610	159945815	160062610	-	ENST00000392771.1@PLA2R1	ENST00000392771.1	protein_coding	160062295,160044774,160042025,160032959,160028850,160028218,160022665,160020106,160016614,160013263,160005652,159987156,159983928,159979830,159977284,159976685,159976068,159970148,159969256,159967539,159956510,159955698,159955199,159951340,159949608,159947419,159945815	160062610,160045157,160042198,160033132,160028963,160028361,160022859,160020263,160016712,160013375,160005821,159987358,159984073,159979914,159977416,159976720,159976225,159970212,159969359,159967678,159956627,159955828,159955346,159951578,159949776,159947559,159946917	Gene ID= ENSG00000153246.12 TPM= 1.06 Transcript Type= protein_coding
chr2	160257718	160270328	160257718	160270328	-	transcript4906.chr2.nnic@ITGB6	transcript4906.chr2.nnic	protein_coding	160270202,160257718	160270328,160258046	Gene ID= ENSG00000115221.10 TPM= 2.12 Transcript Type= NA
chr2	160274518	160407909	160274518	160407909	-	transcript4908.chr2.nic@RBMS1	transcript4908.chr2.nic	protein_coding	160407464,160367216,160318169,160313156,160303330,160300651,160286969,160284995,160284775,160281314,160278548,160277303,160275630,160274518	160407909,160367391,160318227,160313247,160303487,160300730,160287084,160285044,160284868,160281364,160278658,160277383,160275714,160274764	Gene ID= ENSG00000153250.19 TPM= 4.25 Transcript Type= NA
chr2	160274518	160493556	160274518	160493556	-	transcript4911.chr2.nic@RBMS1	transcript4911.chr2.nic	protein_coding	160493289,160367216,160318169,160313156,160303330,160300651,160286978,160284995,160284775,160281314,160278548,160277303,160275630,160274518	160493556,160367391,160318227,160313247,160303487,160300730,160287084,160285044,160284868,160281364,160278658,160277383,160275714,160274764	Gene ID= ENSG00000153250.19 TPM= 3.19 Transcript Type= NA
chr2	160302204	160407851	160302204	160407851	-	transcript4912.chr2.nic@RBMS1	transcript4912.chr2.nic	protein_coding	160407464,160367216,160318169,160313156,160302204	160407851,160367391,160318227,160313247,160303487	Gene ID= ENSG00000153250.19 TPM= 2.12 Transcript Type= NA
chr2	160274520	160407889	160274520	160407889	-	ENST00000409972.5@RBMS1	ENST00000409972.5	protein_coding	160407464,160367216,160318169,160313156,160303330,160300651,160286978,160284995,160284775,160281314,160278548,160277303,160275630,160274520	160407889,160367391,160318227,160313247,160303487,160300730,160287084,160285044,160284868,160281364,160278658,160277383,160275714,160274764	Gene ID= ENSG00000153250.19 TPM= 9.56 Transcript Type= protein_coding
chr2	161160297	161236172	161160297	161236172	+	ENST00000392749.6@TANK	ENST00000392749.6	protein_coding	161160297,161179614,161203487,161204675,161223915,161224631,161230971,161235342	161160486,161179761,161203595,161204793,161223991,161224746,161231551,161236172	Gene ID= ENSG00000136560.13 TPM= 30.8 Transcript Type= protein_coding
chr2	161308038	161411717	161308038	161411717	+	ENST00000409682.7@PSMD14	ENST00000409682.7	protein_coding	161308038,161316437,161318822,161367478,161367784,161370107,161371172,161385464,161391104,161395078,161408837,161411302	161308604,161316569,161318873,161367549,161367903,161370177,161371322,161385571,161391178,161395203,161408899,161411717	Gene ID= ENSG00000115233.11 TPM= 131.71 Transcript Type= protein_coding
chr2	161389891	161393123	161389891	161393123	-	transcript4937.chr2.nnic@NA	transcript4937.chr2.nnic	NA	161389891	161393123	Gene ID= novel_gene_chr2_4938 TPM= 5.31 Transcript Type= NA
chr2	161992241	162074542	161992241	162074542	-	ENST00000360534.7@DPP4	ENST00000360534.7	protein_coding	162073976,162073399,162047403,162046915,162045532,162039132,162038949,162038302,162035164,162033541,162024804,162022755,162020581,162020229,162019223,162018729,162017108,162016768,162014396,162011793,162009241,162008562,162005745,161995300,161994961,161992241	162074542,162073486,162047501,162047006,162045612,162039184,162039021,162038422,162035324,162033653,162024939,162022799,162020688,162020296,162019276,162018850,162017155,162016866,162014465,162011987,162009295,162008661,162005809,161995372,161995034,161993384	Gene ID= ENSG00000197635.9 TPM= 2.12 Transcript Type= protein_coding
chr2	162170690	162243535	162170690	162243535	-	ENST00000188790.8@FAP	ENST00000188790.8	protein_coding	162243322,162242908,162226523,162225483,162224466,162223608,162219853,162219063,162217986,162215898,162213938,162209952,162203041,162202872,162200566,162198757,162194701,162189656,162189103,162188169,162183414,162174867,162173723,162173149,162172811,162170690	162243535,162242992,162226621,162225577,162224540,162223660,162219925,162219183,162218140,162216001,162214073,162209996,162203145,162202942,162200619,162198881,162194748,162189754,162189172,162188363,162183468,162174966,162173787,162173221,162172884,162171080	Gene ID= ENSG00000078098.13 TPM= 3.19 Transcript Type= protein_coding
chr2	162268243	162318717	162268243	162318717	-	transcript4945.chr2.nic@IFIH1	transcript4945.chr2.nic	protein_coding	162317855,162310765,162306709,162293564,162288135,162282366,162281328,162279996,162278205,162277415,162276687,162273795,162272226,162268243	162318717,162310933,162306855,162293668,162288355,162282576,162281545,162280112,162278328,162277693,162276946,162273944,162272387,162268277	Gene ID= ENSG00000115267.5 TPM= 2.12 Transcript Type= NA
chr2	162267079	162318703	162267079	162318703	-	ENST00000263642.2@IFIH1	ENST00000263642.2	protein_coding	162317855,162310765,162306709,162293564,162288135,162282366,162281328,162279996,162278205,162277415,162276687,162273795,162272226,162268087,162267479,162267079	162318703,162310933,162306855,162293668,162288355,162282576,162281545,162280112,162278328,162277693,162276946,162273944,162272387,162268277,162267569,162267379	Gene ID= ENSG00000115267.5 TPM= 2.12 Transcript Type= protein_coding
chr2	162344088	162361420	162344088	162361420	+	ENST00000437150.6@GCA	ENST00000437150.6	protein_coding	162344088,162347578,162352338,162356438,162356758,162359044,162359494,162360217	162344275,162347742,162352407,162356481,162356905,162359157,162359552,162361420	Gene ID= ENSG00000115271.10 TPM= 1.06 Transcript Type= protein_coding
chr2	162344338	162361122	162344338	162361122	+	ENST00000233612.8@GCA	ENST00000233612.8	protein_coding	162344338,162347578,162352338,162356438,162356758,162359044,162359494,162360217	162344525,162347742,162352407,162356481,162356905,162359157,162359552,162361122	Gene ID= ENSG00000115271.10 TPM= 1.06 Transcript Type= protein_coding
chr2	163605899	163611032	163605899	163611032	-	transcript4953.chr2.nnic@NA	transcript4953.chr2.nnic	NA	163605899	163611032	Gene ID= novel_gene_chr2_4954 TPM= 3.19 Transcript Type= NA
chr2	164492816	164621848	164492816	164621848	-	ENST00000263915.7@GRB14	ENST00000263915.7	protein_coding	164621119,164619687,164547660,164527014,164525004,164521980,164508742,164508455,164502255,164497374,164497211,164497008,164494431,164492816	164621848,164619819,164547816,164527135,164525078,164522117,164508852,164508550,164502335,164497490,164497283,164497095,164494524,164493182	Gene ID= ENSG00000115290.9 TPM= 4.25 Transcript Type= protein_coding
chr2	165873362	165953843	165873362	165953843	-	ENST00000243344.7@TTC21B	ENST00000243344.7	protein_coding	165953685,165949595,165949394,165945524,165943219,165941027,165932973,165931758,165930172,165929650,165929135,165924549,165919276,165917257,165915201,165913574,165912514,165911327,165907678,165901722,165899770,165898686,165890838,165890479,165888279,165883794,165880679,165876165,165873362	165953843,165949724,165949504,165945690,165943341,165941184,165933057,165931856,165930364,165929747,165929335,165924678,165919433,165917481,165915439,165913646,165912624,165911465,165907784,165901910,165899880,165898767,165890988,165890640,165888474,165884018,165880799,165876232,165874832	Gene ID= ENSG00000123607.14 TPM= 2.12 Transcript Type= protein_coding
chr2	166456953	166494205	166456953	166494205	-	ENST00000441411.1@SCN7A	ENST00000441411.1	protein_coding	166493968,166477463,166474226,166473799,166472317,166470615,166465781,166465462,166462389,166456953	166494205,166477710,166474344,166473888,166472445,166470706,166465987,166465531,166462530,166457076	Gene ID= ENSG00000136546.13 TPM= 1.06 Transcript Type= protein_coding
chr2	167187283	167259749	167187283	167259749	+	ENST00000409605.1@XIRP2	ENST00000409605.1	protein_coding	167187283,167210735,167218166,167239855,167240664,167241777,167254032,167257857	167187531,167210895,167218300,167239965,167240736,167241910,167254165,167259749	Gene ID= ENSG00000163092.19 TPM= 46.2 Transcript Type= protein_coding
chr2	167187283	167259749	167187283	167259749	+	ENST00000409273.5@XIRP2	ENST00000409273.5	protein_coding	167187283,167210735,167218166,167239855,167240664,167241777,167242569,167254032,167257857	167187531,167210895,167218300,167239965,167240736,167241910,167251947,167254165,167259749	Gene ID= ENSG00000163092.19 TPM= 19.65 Transcript Type= protein_coding
chr2	166888487	167259753	166888487	167259753	+	ENST00000409195.5@XIRP2	ENST00000409195.5	protein_coding	166888487,166903465,167135909,167210735,167218166,167239855,167240664,167241777,167242569,167254032,167257857	166888557,166903890,167136062,167210895,167218300,167239965,167240736,167241910,167251947,167254165,167259753	Gene ID= ENSG00000163092.19 TPM= 23.37 Transcript Type= protein_coding
chr2	167954020	168248141	167954020	168248141	-	ENST00000355999.4@STK39	ENST00000355999.4	protein_coding	168247228,168181978,168167299,168163739,168161787,168140649,168140289,168138088,168129710,168129541,168075109,168074982,168065319,168063500,168017043,168012634,167964662,167954020	168248141,168182090,168167407,168163880,168161842,168140758,168140390,168138221,168129758,168129606,168075231,168075011,168065381,168063570,168017095,168012702,167964726,167955570	Gene ID= ENSG00000198648.10 TPM= 41.42 Transcript Type= protein_coding
chr2	167954020	168247575	167954020	168247575	-	transcript5002.chr2.nnic@STK39	transcript5002.chr2.nnic	protein_coding	168247228,168181978,168167299,168163739,168161787,168140649,168140289,168138088,168129710,168129541,168075109,168074982,168063500,168017043,168012634,167964662,167954020	168247575,168182090,168167407,168163880,168161842,168140758,168140390,168138221,168129758,168129606,168075231,168075011,168063570,168017095,168012702,167964726,167955570	Gene ID= ENSG00000198648.10 TPM= 10.62 Transcript Type= NA
chr2	168240457	168242559	168240457	168242559	+	transcript5008.chr2.nnic@NA	transcript5008.chr2.nnic	NA	168240457	168242559	Gene ID= novel_gene_chr2_5009 TPM= 13.81 Transcript Type= NA
chr2	168455862	168775137	168455862	168775137	+	ENST00000305747.10@CERS6	ENST00000305747.10	protein_coding	168455862,168547596,168561192,168630985,168691034,168694959,168715001,168717872,168765592,168769510	168456618,168547701,168561322,168631042,168691084,168695051,168715129,168717978,168765748,168775137	Gene ID= ENSG00000172292.14 TPM= 4.25 Transcript Type= protein_coding
chr2	168644212	168770261	168644212	168770261	+	transcript5021.chr2.nnic@CERS6	transcript5021.chr2.nnic	protein_coding	168644212,168691034,168694959,168715001,168717872,168765592,168766322,168769510	168644321,168691084,168695051,168715129,168717978,168765748,168766345,168770261	Gene ID= ENSG00000172292.14 TPM= 8.5 Transcript Type= NA
chr2	168456249	168775134	168456249	168775134	+	ENST00000392687.4@CERS6	ENST00000392687.4	protein_coding	168456249,168547596,168561192,168630985,168691034,168694959,168715001,168717872,168765592,168766322,168769510	168456618,168547701,168561322,168631042,168691084,168695051,168715129,168717978,168765748,168766345,168775134	Gene ID= ENSG00000172292.14 TPM= 7.44 Transcript Type= protein_coding
chr2	168592945	168596094	168592945	168596094	+	transcript5027.chr2.nnic@NA	transcript5027.chr2.nnic	NA	168592945	168596094	Gene ID= novel_gene_chr2_5028 TPM= 2.12 Transcript Type= NA
chr2	168662129	168664106	168662129	168664106	-	transcript5031.chr2.nnic@NA	transcript5031.chr2.nnic	NA	168662129	168664106	Gene ID= novel_gene_chr2_5032 TPM= 2.12 Transcript Type= NA
chr2	168802418	168865514	168802418	168865514	+	ENST00000317647.11@NOSTRIN	ENST00000317647.11	protein_coding	168802418,168811567,168824634,168828158,168828420,168831472,168834227,168842992,168851084,168851279,168855352,168856690,168859512,168860795,168861960,168864834	168802673,168811652,168824717,168828220,168828501,168831534,168834325,168843117,168851182,168851404,168855460,168856778,168859637,168860909,168862049,168865514	Gene ID= ENSG00000163072.15 TPM= 6.37 Transcript Type= protein_coding
chr2	169081758	169096167	169081758	169096167	+	transcript5035.chr2.nic@DHRS9	transcript5035.chr2.nic	protein_coding	169081758,169083329,169091790,169095544	169081894,169083587,169091953,169096167	Gene ID= ENSG00000073737.16 TPM= 10.62 Transcript Type= NA
chr2	169479178	169506655	169479178	169506655	+	ENST00000295240.7@BBS5	ENST00000295240.7	protein_coding	169479178,169482251,169487069,169487806,169487987,169492874,169493741,169497627,169499486,169503095,169504303,169504481	169479612,169482333,169487134,169487855,169488114,169493009,169493836,169497689,169499620,169503178,169504326,169506655	Gene ID= ENSG00000163093.11 TPM= 12.75 Transcript Type= protein_coding
chr2	169509702	169526262	169509702	169526262	+	ENST00000284669.1@KLHL41	ENST00000284669.1	protein_coding	169509702,169514574,169514854,169518190,169520861,169525585	169510888,169514731,169514961,169518375,169521007,169526262	Gene ID= ENSG00000239474.6 TPM= 19.12 Transcript Type= protein_coding
chr2	169529749	169573905	169529749	169573905	-	transcript5040.chr2.nic@FASTKD1	transcript5040.chr2.nic	protein_coding	169573669,169571653,169563225,169560387,169557187,169555124,169546218,169544721,169540051,169538013,169537227,169531352,169530587,169529749	169573905,169572171,169563350,169560785,169557297,169555255,169546704,169544835,169540179,169538141,169537340,169531490,169530701,169529926	Gene ID= ENSG00000138399.17 TPM= 11.15 Transcript Type= NA
chr2	169529749	169573905	169529749	169573905	-	transcript5044.chr2.nic@FASTKD1	transcript5044.chr2.nic	protein_coding	169573669,169571653,169563225,169560387,169557187,169555124,169546218,169544721,169540051,169537227,169531352,169530587,169529749	169573905,169572171,169563350,169560785,169557297,169555255,169546704,169544835,169540179,169537340,169531490,169530701,169529926	Gene ID= ENSG00000138399.17 TPM= 2.66 Transcript Type= NA
chr2	169529749	169573873	169529749	169573873	-	ENST00000453153.6@FASTKD1	ENST00000453153.6	protein_coding	169573669,169571653,169569184,169563225,169560387,169557187,169555124,169546218,169544721,169540051,169538013,169537227,169531352,169530587,169529749	169573873,169572171,169569252,169563350,169560785,169557297,169555255,169546704,169544835,169540179,169538141,169537340,169531490,169530701,169529926	Gene ID= ENSG00000138399.17 TPM= 39.83 Transcript Type= protein_coding
chr2	169529755	169573832	169529755	169573832	-	ENST00000453929.6@FASTKD1	ENST00000453929.6	protein_coding	169573669,169571653,169569184,169563225,169560387,169557187,169555124,169546218,169544721,169540051,169537227,169531352,169530587,169529755	169573832,169572171,169569252,169563350,169560785,169557297,169555255,169546704,169544835,169540179,169537340,169531490,169530701,169529926	Gene ID= ENSG00000138399.17 TPM= 6.9 Transcript Type= protein_coding
chr2	169584340	169641406	169584340	169641406	+	ENST00000260970.7@PPIG	ENST00000260970.7	protein_coding	169584340,169603642,169604026,169604187,169606039,169607104,169608671,169614464,169614585,169630774,169631766,169633160,169636092,169636413	169584490,169603694,169604102,169604261,169606146,169607148,169608758,169614493,169614724,169630987,169631933,169633247,169636228,169641406	Gene ID= ENSG00000138398.15 TPM= 13.81 Transcript Type= protein_coding
chr2	169584569	169637711	169584569	169637711	+	transcript5061.chr2.nic@PPIG	transcript5061.chr2.nic	protein_coding	169584569,169603642,169604026,169604187,169606039,169607104,169608671,169614464,169614585,169630774,169631766,169633160,169636092,169636413	169584899,169603694,169604102,169604261,169606146,169607148,169608758,169614493,169614724,169630987,169631933,169633247,169636228,169637711	Gene ID= ENSG00000138398.15 TPM= 2.12 Transcript Type= NA
chr2	169694465	169701708	169694465	169701708	+	ENST00000359744.7@PHOSPHO2	ENST00000359744.7	protein_coding	169694465,169695215,169697361,169700946	169694622,169695247,169697531,169701708	Gene ID= ENSG00000144362.11 TPM= 2.12 Transcript Type= protein_coding
chr2	169733846	169751888	169733846	169751888	+	ENST00000392647.6@KLHL23	ENST00000392647.6	protein_coding	169733846,169735013,169741385,169749422	169734087,169736227,169741537,169751888	Gene ID= ENSG00000213160.9 TPM= 6.37 Transcript Type= protein_coding
chr2	169798812	169812064	169798812	169812064	+	ENST00000260956.8@SSB	ENST00000260956.8	protein_coding	169798812,169800952,169805474,169805665,169806785,169806971,169808482,169808860,169810283,169810858,169811183,169811668	169798976,169801026,169805577,169805839,169806892,169807071,169808553,169808902,169810423,169811044,169811323,169812064	Gene ID= ENSG00000138385.15 TPM= 74.35 Transcript Type= protein_coding
chr2	169811757	169824925	169811757	169824925	-	ENST00000409965.5@METTL5	ENST00000409965.5	protein_coding	169824782,169824489,169821943,169821092,169819561,169815477,169812457,169811757	169824925,169824640,169822057,169821273,169819643,169815528,169812506,169811858	Gene ID= ENSG00000138382.14 TPM= 32.22 Transcript Type= protein_coding
chr2	169811757	169824931	169811757	169824931	-	ENST00000392640.6@METTL5	ENST00000392640.6	protein_coding	169824868,169824489,169821943,169821092,169819561,169815477,169812457,169811757	169824931,169824640,169822057,169821273,169819643,169815528,169812506,169811858	Gene ID= ENSG00000138382.14 TPM= 32.22 Transcript Type= protein_coding
chr2	169811757	169824914	169811757	169824914	-	ENST00000260953.9@METTL5	ENST00000260953.9	protein_coding	169824489,169821943,169821092,169819561,169815477,169812457,169811757	169824914,169822057,169821273,169819643,169815528,169812506,169811858	Gene ID= ENSG00000138382.14 TPM= 15.22 Transcript Type= protein_coding
chr2	169827428	169947812	169827428	169947812	+	transcript5084.chr2.nic@UBR3	transcript5084.chr2.nic	protein_coding	169827428,169872236,169875791,169877494,169878525,169891165,169895181,169896507,169905114,169906031,169914060,169923929,169924084,169925619,169926692,169926838,169927320,169928727,169932912,169942493,169946288,169947542	169828052,169872375,169875949,169877637,169878574,169891231,169895311,169896735,169905293,169906164,169914146,169923994,169924173,169925747,169926744,169926971,169927405,169928868,169933008,169942634,169946392,169947812	Gene ID= ENSG00000144357.16 TPM= 2.12 Transcript Type= NA
chr2	169827458	170084131	169827458	170084131	+	ENST00000272793.9@UBR3	ENST00000272793.9	protein_coding	169827458,169872236,169875791,169877494,169878525,169891165,169895181,169896507,169905114,169906031,169914060,169923929,169924084,169925619,169926692,169926838,169927320,169928729,169932912,169942493,169946288,169947542,169949605,169958438,169986645,169994323,170001304,170006990,170008804,170015281,170029346,170040882,170055460,170061079,170061318,170073428,170079814,170080545,170081726	169828052,169872375,169875949,169877637,169878574,169891231,169895311,169896735,169905293,169906164,169914146,169923994,169924173,169925747,169926744,169926971,169927407,169928868,169933008,169942634,169946392,169947715,169950065,169958526,169986794,169994456,170001414,170007190,170008940,170015366,170029448,170040985,170055584,170061186,170061443,170073607,170080023,170080684,170084131	Gene ID= ENSG00000144357.16 TPM= 16.99 Transcript Type= protein_coding
chr2	170715351	170718078	170715351	170718078	+	ENST00000375281.3@SP5	ENST00000375281.3	protein_coding	170715351,170716259	170715563,170718078	Gene ID= ENSG00000204335.3 TPM= 1.06 Transcript Type= protein_coding
chr2	170770931	170778148	170770931	170778148	+	transcript5108.chr2.nnic@AC007405.3	transcript5108.chr2.nnic	lincRNA	170770931,170777147,170777377,170777644	170771427,170777177,170777425,170778148	Gene ID= ENSG00000239467.5 TPM= 2.12 Transcript Type= NA
chr2	170928526	170967129	170928526	170967129	+	ENST00000234160.4@GORASP2	ENST00000234160.4	protein_coding	170928526,170948350,170949539,170950204,170951328,170954650,170956436,170961663,170962839,170965790	170929403,170948430,170949742,170950290,170951458,170954782,170956559,170961749,170962946,170967129	Gene ID= ENSG00000115806.12 TPM= 48.86 Transcript Type= protein_coding
chr2	171317405	171434802	171317405	171434802	-	ENST00000612742.4@METTL8	ENST00000612742.4	protein_coding	171434674,171392043,171360422,171339184,171337453,171331804,171330559,171326042,171325841,171317405	171434802,171392197,171360513,171339554,171337502,171331867,171330698,171326148,171325906,171324362	Gene ID= ENSG00000123600.19 TPM= 1.06 Transcript Type= protein_coding
chr2	171317409	171434086	171317409	171434086	-	ENST00000375258.8@METTL8	ENST00000375258.8	protein_coding	171433883,171392043,171360422,171339184,171337453,171331804,171330559,171326042,171325841,171317409	171434086,171392197,171360513,171339554,171337502,171331867,171330698,171326148,171325906,171324362	Gene ID= ENSG00000123600.19 TPM= 1.06 Transcript Type= protein_coding
chr2	171517270	171517716	171517270	171517716	-	ENST00000433675.1@AC007969.1	ENST00000433675.1	processed_pseudogene	171517270	171517716	Gene ID= ENSG00000233762.3 TPM= 40.36 Transcript Type= processed_pseudogene
chr2	171522348	171558133	171522348	171558133	+	ENST00000321348.8@CYBRD1	ENST00000321348.8	protein_coding	171522348,171541585,171553346,171554524	171522738,171541793,171553500,171558133	Gene ID= ENSG00000071967.11 TPM= 19.12 Transcript Type= protein_coding
chr2	171687409	171748411	171687409	171748411	+	ENST00000340296.8@DYNC1I2	ENST00000340296.8	protein_coding	171687409,171690147,171692777,171707287,171715328,171725618,171725919,171726194,171726791,171727821,171728305,171728717,171729709,171744049,171745802,171747776	171687627,171690263,171692894,171707377,171715443,171725713,171726081,171726293,171726916,171727967,171728418,171728850,171729853,171744189,171745927,171748411	Gene ID= ENSG00000077380.15 TPM= 21.24 Transcript Type= protein_coding
chr2	171687672	171748411	171687672	171748411	+	ENST00000409197.5@DYNC1I2	ENST00000409197.5	protein_coding	171687672,171690147,171692777,171707287,171715328,171725618,171725919,171726194,171726791,171727821,171728305,171728717,171729709,171744049,171745802,171747776	171687873,171690263,171692894,171707377,171715443,171725713,171726081,171726293,171726916,171727967,171728418,171728850,171729853,171744189,171745927,171748411	Gene ID= ENSG00000077380.15 TPM= 74.35 Transcript Type= protein_coding
chr2	171781400	171785401	171781400	171785401	-	transcript5174.chr2.nnic@NA	transcript5174.chr2.nnic	NA	171781400	171785401	Gene ID= novel_gene_chr2_5175 TPM= 2.12 Transcript Type= NA
chr2	171784370	171894252	171784370	171894252	-	ENST00000422440.6@SLC25A12	ENST00000422440.6	protein_coding	171894203,171893205,171868681,171855834,171844369,171837121,171834727,171833963,171826798,171815121,171813339,171810224,171809606,171793627,171791451,171787789,171787571,171784370	171894252,171893258,171868823,171855949,171844508,171837267,171834865,171834056,171826882,171815202,171813497,171810276,171809686,171793767,171791589,171787947,171787661,171785475	Gene ID= ENSG00000115840.13 TPM= 44.61 Transcript Type= protein_coding
chr2	171922465	171983682	171922465	171983682	+	ENST00000264108.4@HAT1	ENST00000264108.4	protein_coding	171922465,171925537,171946708,171952881,171965338,171965787,171966409,171966843,171976157,171979247,171983185	171922507,171925641,171946783,171953001,171965517,171965908,171966513,171966949,171976308,171979363,171983682	Gene ID= ENSG00000128708.12 TPM= 9.56 Transcript Type= protein_coding
chr2	172080669	172080855	172080669	172080855	+	transcript5184.chr2.nnic@NA	transcript5184.chr2.nnic	NA	172080669	172080855	Gene ID= novel_gene_chr2_5185 TPM= 2.12 Transcript Type= NA
chr2	172427555	172506230	172427555	172506230	+	ENST00000264107.11@ITGA6	ENST00000264107.11	protein_coding	172427555,172465539,172467481,172469125,172470974,172474055,172474929,172475597,172476395,172479641,172479990,172484782,172485121,172487023,172487264,172487547,172487728,172487961,172488126,172489485,172491024,172491221,172491425,172497975,172501772,172504091	172427970,172465663,172467560,172469380,172471105,172474265,172475122,172475685,172476513,172479739,172480051,172484942,172485264,172487138,172487453,172487630,172487807,172488038,172488228,172489658,172491122,172491331,172491523,172498100,172501901,172506230	Gene ID= ENSG00000091409.14 TPM= 14.87 Transcript Type= protein_coding
chr2	172555978	172628032	172555978	172628032	+	transcript5197.chr2.nnic@PDK1	transcript5197.chr2.nnic	protein_coding	172555978,172558708,172562220,172564503,172564978,172566856,172568741,172570726,172586278,172592935,172595829,172627829	172556346,172558849,172562291,172564687,172565073,172566933,172568817,172570824,172586388,172593048,172596023,172628032	Gene ID= ENSG00000152256.13 TPM= 2.12 Transcript Type= NA
chr2	172555969	172608669	172555969	172608669	+	ENST00000282077.7@PDK1	ENST00000282077.7	protein_coding	172555969,172558708,172562220,172564503,172564978,172566856,172568741,172570726,172586278,172592935,172595829	172556346,172558849,172562291,172564687,172565073,172566933,172568817,172570824,172586388,172593048,172608669	Gene ID= ENSG00000152256.13 TPM= 13.81 Transcript Type= protein_coding
chr2	172735164	172737894	172735164	172737894	+	transcript5221.chr2.nnic@NA	transcript5221.chr2.nnic	NA	172735164	172737894	Gene ID= novel_gene_chr2_5222 TPM= 2.12 Transcript Type= NA
chr2	172821575	173052893	172821575	173052893	+	ENST00000397087.7@RAPGEF4	ENST00000397087.7	protein_coding	172821575,172917802,172922281,172960760,172961122,172965562,172967261,172983496,172985433,172988196,172988693,172990810,172996466,173001266,173014464,173016349,173017174,173017426,173018656,173020618,173026572,173027081,173030164,173033914,173036125,173036628,173048600,173051640	172821976,172917874,172922300,172960813,172961228,172965683,172967444,172983580,172985493,172988272,172988839,172990925,172996554,173001344,173014614,173016437,173017204,173017504,173018802,173020715,173026697,173027259,173030254,173033964,173036212,173036692,173048654,173052893	Gene ID= ENSG00000091428.17 TPM= 1.06 Transcript Type= protein_coding
chr2	172735895	172928851	172735895	172928851	+	transcript5215.chr2.nnic@RAPGEF4	transcript5215.chr2.nnic	protein_coding	172735895,172795025,172797525,172814279,172917802,172922281,172928702	172736048,172795167,172797613,172814425,172917874,172922300,172928851	Gene ID= ENSG00000091428.17 TPM= 2.12 Transcript Type= NA
chr2	172735841	173052887	172735841	173052887	+	ENST00000397081.7@RAPGEF4	ENST00000397081.7	protein_coding	172735841,172795025,172797525,172814279,172917802,172922281,172960760,172961122,172965562,172967261,172983496,172985433,172988196,172988693,172990810,172996466,173001266,173014464,173016349,173017174,173017426,173018656,173020618,173026572,173027081,173030164,173033914,173036125,173036628,173048600,173051640	172736048,172795167,172797613,172814425,172917874,172922300,172960813,172961228,172965683,172967444,172983580,172985493,172988272,172988839,172990925,172996554,173001344,173014614,173016437,173017204,173017504,173018802,173020715,173026697,173027259,173030254,173033964,173036212,173036692,173048654,173052887	Gene ID= ENSG00000091428.17 TPM= 4.25 Transcript Type= protein_coding
chr2	173075435	173222204	173075435	173222204	+	ENST00000539448.5@MAP3K20	ENST00000539448.5	protein_coding	173075435,173090998,173169805,173182854,173187558,173190895,173191040,173198026,173203796,173209729,173217115,173221150	173075670,173091190,173169892,173182955,173187623,173190923,173191177,173198112,173203870,173209835,173217250,173222204	Gene ID= ENSG00000091436.16 TPM= 2.54 Transcript Type= protein_coding
chr2	173075842	173227146	173075842	173227146	+	ENST00000338983.7@MAP3K20	ENST00000338983.7	protein_coding	173075842,173090998,173169805,173182854,173187558,173190895,173191040,173198026,173203796,173209729,173217115,173221150	173076002,173091190,173169892,173182955,173187623,173190923,173191177,173198112,173203870,173209835,173217250,173227146	Gene ID= ENSG00000091436.16 TPM= 87.1 Transcript Type= protein_coding
chr2	173090615	173222204	173090615	173222204	+	transcript5240.chr2.nic@MAP3K20	transcript5240.chr2.nic	protein_coding	173090615,173090998,173169805,173182854,173187558,173190895,173191040,173198026,173203796,173209729,173217115,173221150	173090830,173091190,173169892,173182955,173187623,173190923,173191177,173198112,173203870,173209835,173217250,173222204	Gene ID= ENSG00000091436.16 TPM= 126.81 Transcript Type= NA
chr2	173110240	173113499	173110240	173113499	-	transcript5281.chr2.nnic@NA	transcript5281.chr2.nnic	NA	173110240	173113499	Gene ID= novel_gene_chr2_5282 TPM= 12.75 Transcript Type= NA
chr2	173120703	173122130	173120703	173122130	-	transcript5273.chr2.nnic@NA	transcript5273.chr2.nnic	NA	173120703	173122130	Gene ID= novel_gene_chr2_5274 TPM= 6.37 Transcript Type= NA
chr2	173199664	173202389	173199664	173202389	-	transcript5271.chr2.nnic@NA	transcript5271.chr2.nnic	NA	173199664	173202389	Gene ID= novel_gene_chr2_5272 TPM= 5.31 Transcript Type= NA
chr2	173354861	173368997	173354861	173368997	+	ENST00000306721.7@CDCA7	ENST00000306721.7	protein_coding	173354861,173358712,173359255,173363226,173363818,173364795,173365452,173366283,173367150,173367634	173354984,173358837,173359491,173363462,173363895,173364989,173365592,173366432,173367286,173368997	Gene ID= ENSG00000144354.13 TPM= 3.19 Transcript Type= protein_coding
chr2	173906459	173965702	173906459	173965702	-	ENST00000310015.10@SP3	ENST00000310015.10	protein_coding	173965165,173964405,173963761,173954873,173918593,173913070,173906459	173965702,173964553,173963883,173956232,173918785,173913266,173910257	Gene ID= ENSG00000172845.14 TPM= 15.93 Transcript Type= protein_coding
chr2	173908532	173964710	173908532	173964710	-	transcript5288.chr2.nic@SP3	transcript5288.chr2.nic	protein_coding	173964405,173963761,173954873,173918593,173913070,173908532	173964710,173963883,173956232,173918785,173913266,173910257	Gene ID= ENSG00000172845.14 TPM= 3.72 Transcript Type= NA
chr2	173908532	173965239	173908532	173965239	-	transcript5289.chr2.nic@SP3	transcript5289.chr2.nic	protein_coding	173965165,173964405,173954873,173918593,173913070,173908532	173965239,173964553,173956232,173918785,173913266,173910257	Gene ID= ENSG00000172845.14 TPM= 2.66 Transcript Type= NA
chr2	174072447	174248698	174072447	174248698	-	ENST00000284719.7@OLA1	ENST00000284719.7	protein_coding	174248452,174246715,174229308,174223033,174141825,174123595,174123180,174081924,174081152,174078968,174072447	174248698,174246815,174229451,174223160,174142000,174123675,174123277,174082064,174081248,174079090,174075527	Gene ID= ENSG00000138430.15 TPM= 55.23 Transcript Type= protein_coding
chr2	174075008	174248599	174075008	174248599	-	ENST00000344357.9@OLA1	ENST00000344357.9	protein_coding	174248452,174229308,174223033,174141825,174123595,174123180,174081924,174081152,174078968,174075008	174248599,174229451,174223160,174142000,174123675,174123277,174082064,174081248,174079090,174075527	Gene ID= ENSG00000138430.15 TPM= 5.31 Transcript Type= protein_coding
chr2	174348022	174395715	174348022	174395715	-	ENST00000342016.7@CIR1	ENST00000342016.7	protein_coding	174395551,174387685,174381704,174380804,174380651,174380202,174378923,174351619,174350660,174348022	174395715,174387779,174381777,174380814,174380715,174380250,174379040,174351725,174350745,174349172	Gene ID= ENSG00000138433.15 TPM= 4.25 Transcript Type= protein_coding
chr2	174395739	174428221	174395739	174428221	+	transcript5312.chr2.nic@SCRN3	transcript5312.chr2.nic	protein_coding	174395739,174398275,174399922,174400990,174404103,174422885,174424475,174427713	174396293,174398442,174400103,174401189,174404315,174423047,174424649,174428221	Gene ID= ENSG00000144306.14 TPM= 2.12 Transcript Type= NA
chr2	174434152	174487094	174434152	174487094	-	ENST00000392551.6@GPR155	ENST00000392551.6	protein_coding	174486873,174482873,174481497,174472965,174470390,174468912,174466544,174465785,174461588,174461402,174459878,174453737,174446611,174445081,174442119,174439898,174434152	174487094,174482918,174481987,174473364,174470555,174469067,174466627,174465902,174461672,174461492,174460088,174453841,174446747,174445176,174442183,174440035,174436416	Gene ID= ENSG00000163328.13 TPM= 1.06 Transcript Type= protein_coding
chr2	174432238	174487080	174432238	174487080	-	ENST00000392552.6@GPR155	ENST00000392552.6	protein_coding	174486873,174481497,174472965,174470390,174468912,174466544,174465785,174461588,174461402,174459878,174453737,174446611,174445081,174442119,174439898,174432238	174487080,174481987,174473364,174470555,174469067,174466627,174465902,174461672,174461492,174460088,174453841,174446747,174445176,174442183,174440035,174436416	Gene ID= ENSG00000163328.13 TPM= 3.19 Transcript Type= protein_coding
chr2	174483588	174487085	174483588	174487085	-	transcript5328.chr2.nnic@NA	transcript5328.chr2.nnic	NA	174483588	174487085	Gene ID= novel_gene_chr2_5329 TPM= 4.25 Transcript Type= NA
chr2	174799363	175005413	174799363	175005413	-	transcript5339.chr2.nic@CHN1	transcript5339.chr2.nic	protein_coding	175005206,175004894,174952164,174944888,174918534,174915058,174877840,174846880,174824434,174812309,174811511,174808905,174801707,174799363	175005413,175005080,174952202,174944943,174918565,174915171,174878128,174846957,174824518,174812482,174811588,174809042,174801812,174800287	Gene ID= ENSG00000128656.13 TPM= 3.72 Transcript Type= NA
chr2	174799363	175005226	174799363	175005226	-	ENST00000409900.7@CHN1	ENST00000409900.7	protein_coding	175004894,174952164,174944888,174918534,174915058,174877840,174846880,174824434,174812309,174811511,174808905,174801707,174799363	175005226,174952202,174944943,174918565,174915171,174878128,174846957,174824518,174812482,174811588,174809042,174801812,174800287	Gene ID= ENSG00000128656.13 TPM= 2.66 Transcript Type= protein_coding
chr2	174799492	174847549	174799492	174847549	-	ENST00000295497.11@CHN1	ENST00000295497.11	protein_coding	174846880,174824434,174812309,174811511,174808905,174801707,174799492	174847549,174824518,174812482,174811588,174809042,174801812,174800287	Gene ID= ENSG00000128656.13 TPM= 4.25 Transcript Type= protein_coding
chr2	174799495	175005364	174799495	175005364	-	ENST00000488080.5@CHN1	ENST00000488080.5	protein_coding	175005206,174952164,174944888,174918534,174915058,174846880,174824434,174812309,174811511,174808905,174801707,174799495	175005364,174952202,174944943,174918565,174915171,174846957,174824518,174812482,174811588,174809042,174801812,174800287	Gene ID= ENSG00000128656.13 TPM= 2.12 Transcript Type= processed_transcript
chr2	175111570	175168183	175111570	175168183	-	transcript5363.chr2.nic@ATF2	transcript5363.chr2.nic	protein_coding	175168050,175151060,175136412,175130138,175121444,175118251,175117990,175114690,175113994,175111570	175168183,175151158,175136486,175130207,175121540,175118369,175118118,175114868,175114108,175111654	Gene ID= ENSG00000115966.16 TPM= 2.66 Transcript Type= NA
chr2	175072250	175168206	175072250	175168206	-	ENST00000264110.6@ATF2	ENST00000264110.6	protein_coding	175168050,175151060,175136412,175130138,175121444,175118251,175117990,175114690,175113994,175111568,175097444,175093061,175080660,175072250	175168206,175151158,175136486,175130207,175121540,175118369,175118118,175114868,175114108,175111654,175097593,175093267,175080765,175074835	Gene ID= ENSG00000115966.16 TPM= 9.56 Transcript Type= protein_coding
chr2	175072250	175168206	175072250	175168206	-	ENST00000345739.9@ATF2	ENST00000345739.9	protein_coding	175168050,175151060,175136412,175130138,175118251,175117990,175114690,175113994,175111568,175097444,175093061,175080660,175072250	175168206,175151158,175136486,175130207,175118369,175118118,175114868,175114108,175111654,175097593,175093267,175080765,175074835	Gene ID= ENSG00000115966.16 TPM= 5.84 Transcript Type= protein_coding
chr2	175133953	175134554	175133953	175134554	+	transcript5367.chr2.nnic@NA	transcript5367.chr2.nnic	NA	175133953	175134554	Gene ID= novel_gene_chr2_5368 TPM= 3.19 Transcript Type= NA
chr2	175158588	175163930	175158588	175163930	+	transcript5365.chr2.nnic@NA	transcript5365.chr2.nnic	NA	175158588	175163930	Gene ID= novel_gene_chr2_5366 TPM= 3.19 Transcript Type= NA
chr2	175176258	175184607	175176258	175184607	-	ENST00000284727.8@ATP5G3	ENST00000284727.8	protein_coding	175181656,175181355,175180098,175179057,175176258	175184607,175181466,175180178,175179250,175178402	Gene ID= ENSG00000154518.9 TPM= 636.23 Transcript Type= protein_coding
chr2	175178067	175181710	175178067	175181710	-	ENST00000409194.5@ATP5G3	ENST00000409194.5	protein_coding	175181656,175181355,175180098,175179057,175178067	175181710,175181483,175180178,175179250,175178402	Gene ID= ENSG00000154518.9 TPM= 8.5 Transcript Type= protein_coding
chr2	175178145	175181663	175178145	175181663	-	ENST00000392541.3@ATP5G3	ENST00000392541.3	protein_coding	175181355,175180098,175179057,175178145	175181663,175180178,175179250,175178402	Gene ID= ENSG00000154518.9 TPM= 55.23 Transcript Type= protein_coding
chr2	175178186	175181710	175178186	175181710	-	ENST00000497075.5@ATP5G3	ENST00000497075.5	protein_coding	175181656,175181355,175180098,175178186	175181710,175181466,175180178,175179250	Gene ID= ENSG00000154518.9 TPM= 4.25 Transcript Type= retained_intron
chr2	175923892	176002345	175923892	176002345	-	ENST00000272748.8@LNPK	ENST00000272748.8	protein_coding	176002160,175995558,175993182,175992231,175979810,175970764,175964506,175964372,175947480,175939552,175938313,175937344,175923892	176002345,175995646,175993223,175992418,175979868,175970804,175964589,175964423,175947692,175939657,175938383,175937514,175930199	Gene ID= ENSG00000144320.13 TPM= 23.37 Transcript Type= protein_coding
chr2	176005060	176008569	176005060	176008569	+	transcript5406.chr2.nnic@NA	transcript5406.chr2.nnic	NA	176005060	176008569	Gene ID= novel_gene_chr2_5407 TPM= 4.25 Transcript Type= NA
chr2	176188579	176190907	176188579	176190907	+	ENST00000331462.5@HOXD1	ENST00000331462.5	protein_coding	176188579,176189808	176189453,176190907	Gene ID= ENSG00000128645.14 TPM= 2.12 Transcript Type= protein_coding
chr2	176269395	176338025	176269395	176338025	+	ENST00000420864.5@MTX2	ENST00000420864.5	protein_coding	176269395,176270216,176296860,176297849,176323392,176326825,176328293,176328874,176329301,176330584,176337493	176269669,176270419,176296907,176297895,176323464,176326901,176328385,176328912,176329426,176330660,176338025	Gene ID= ENSG00000128654.13 TPM= 8.5 Transcript Type= nonsense_mediated_decay
chr2	176269419	176338025	176269419	176338025	+	ENST00000249442.10@MTX2	ENST00000249442.10	protein_coding	176269419,176296860,176297849,176323392,176326825,176328293,176328874,176329301,176330584,176337493	176269669,176296907,176297895,176323464,176326901,176328385,176328912,176329426,176330660,176338025	Gene ID= ENSG00000128654.13 TPM= 5.31 Transcript Type= protein_coding
chr2	177212563	177220085	177212563	177220085	+	ENST00000392524.6@HNRNPA3	ENST00000392524.6	protein_coding	177212563,177215539,177215750,177215978,177216503,177216676,177216860,177217705,177219037,177219247,177219408	177212871,177215661,177215896,177216188,177216592,177216771,177216940,177217845,177219159,177219314,177220085	Gene ID= ENSG00000170144.20 TPM= 15.4 Transcript Type= protein_coding
chr2	177212749	177223958	177212749	177223958	+	ENST00000411529.6@HNRNPA3	ENST00000411529.6	protein_coding	177212749,177215539,177215750,177215978,177216503,177216676,177216860,177217705,177219037,177219247,177219408	177212805,177215661,177215896,177216188,177216592,177216771,177216940,177217845,177219159,177219314,177223958	Gene ID= ENSG00000170144.20 TPM= 3.19 Transcript Type= protein_coding
chr2	177212761	177219774	177212761	177219774	+	transcript5433.chr2.nic@HNRNPA3	transcript5433.chr2.nic	protein_coding	177212761,177215539,177215750,177215978,177216503,177216676,177216860,177219037,177219247,177219408	177212871,177215661,177215896,177216188,177216592,177216771,177216940,177219159,177219314,177219774	Gene ID= ENSG00000170144.20 TPM= 3.72 Transcript Type= NA
chr2	177230308	177392681	177230308	177392681	-	transcript5434.chr2.nic@NFE2L2	transcript5434.chr2.nic	protein_coding	177392573,177338598,177334393,177323085,177311233,177310964,177234005,177233250,177232392,177230308	177392681,177338699,177334529,177323396,177311328,177311035,177234271,177233339,177232583,177232008	Gene ID= ENSG00000116044.15 TPM= 6.72 Transcript Type= NA
chr2	177230309	177264770	177230309	177264770	-	transcript5438.chr2.nnic@NFE2L2	transcript5438.chr2.nnic	protein_coding	177264532,177234005,177233250,177232392,177230814,177230309	177264770,177234271,177233339,177232583,177232008,177230362	Gene ID= ENSG00000116044.15 TPM= 5.66 Transcript Type= NA
chr2	177230305	177265131	177230305	177265131	-	ENST00000397062.7@NFE2L2	ENST00000397062.7	protein_coding	177264532,177234005,177233250,177232392,177230305	177265131,177234271,177233339,177232583,177232008	Gene ID= ENSG00000116044.15 TPM= 106.57 Transcript Type= protein_coding
chr2	177375307	177376345	177375307	177376345	+	transcript5451.chr2.nnic@NA	transcript5451.chr2.nnic	NA	177375307	177376345	Gene ID= novel_gene_chr2_5452 TPM= 3.19 Transcript Type= NA
chr2	177392644	177543836	177392644	177543836	+	ENST00000264167.8@AGPS	ENST00000264167.8	protein_coding	177392644,177420269,177434327,177436764,177436980,177440965,177442407,177445546,177461893,177468416,177482059,177493148,177497689,177499618,177505506,177507970,177513819,177521269,177523748,177538074	177393049,177420358,177434417,177436884,177437054,177441036,177442486,177445626,177462018,177468524,177482186,177493199,177497765,177499730,177505575,177508031,177513908,177521368,177523805,177543836	Gene ID= ENSG00000018510.13 TPM= 2.12 Transcript Type= protein_coding
chr2	177614297	177618714	177614297	177618714	-	transcript5463.chr2.nnic@NA	transcript5463.chr2.nnic	NA	177614297	177618714	Gene ID= novel_gene_chr2_5464 TPM= 3.19 Transcript Type= NA
chr2	178112455	178129656	178112455	178129656	+	ENST00000286070.9@RBM45	ENST00000286070.9	protein_coding	178112455,178116262,178118055,178120287,178121180,178123522,178123828,178124127,178125984,178129397	178112846,178116384,178118181,178120409,178121359,178123651,178123912,178124290,178126184,178129656	Gene ID= ENSG00000155636.14 TPM= 2.12 Transcript Type= protein_coding
chr2	178194512	178395785	178194512	178395785	+	transcript5470.chr2.nic@OSBPL6	transcript5470.chr2.nic	protein_coding	178194512,178284927,178306030,178324177,178328256,178331552,178332641,178332871,178336301,178338991,178339672,178344286,178349224,178361682,178373890,178382420,178383024,178384039,178385458,178387061,178389009,178391073,178392412,178394313,178395451	178194674,178285121,178306286,178324269,178328378,178331605,178332754,178333041,178336433,178339094,178339764,178344360,178349389,178361815,178374027,178382507,178383277,178384176,178385521,178387139,178389153,178391217,178392538,178394435,178395785	Gene ID= ENSG00000079156.16 TPM= 2.12 Transcript Type= NA
chr2	178194458	178395785	178194458	178395785	+	transcript5474.chr2.nic@OSBPL6	transcript5474.chr2.nic	protein_coding	178194458,178284927,178306030,178324177,178328256,178331552,178332641,178332871,178336301,178338991,178349224,178361682,178373890,178382420,178383024,178384039,178385458,178387061,178389009,178391073,178392412,178394313,178395451	178194674,178285121,178306286,178324269,178328378,178331605,178332754,178333041,178336433,178339094,178349389,178361815,178374027,178382507,178383277,178384176,178385521,178387139,178389153,178391217,178392538,178394435,178395785	Gene ID= ENSG00000079156.16 TPM= 4.25 Transcript Type= NA
chr2	178194523	178395772	178194523	178395772	+	ENST00000409045.7@OSBPL6	ENST00000409045.7	protein_coding	178194523,178284927,178306030,178324177,178328256,178331552,178332641,178332871,178336301,178338991,178349224,178361682,178372126,178373890,178382420,178383024,178384039,178385458,178387061,178389009,178391073,178392412,178394313,178395451	178194674,178285121,178306286,178324269,178328378,178331605,178332754,178333041,178336433,178339094,178349389,178361815,178372233,178374027,178382507,178383277,178384176,178385521,178387139,178389153,178391217,178392538,178394435,178395772	Gene ID= ENSG00000079156.16 TPM= 1.06 Transcript Type= protein_coding
chr2	178431414	178451159	178431414	178451159	-	transcript5486.chr2.nnic@PRKRA	transcript5486.chr2.nnic	protein_coding	178450966,178447505,178444422,178443267,178441610,178436145,178431414	178451159,178447586,178444500,178443384,178441704,178436319,178432254	Gene ID= ENSG00000180228.12 TPM= 6.9 Transcript Type= NA
chr2	178431414	178451231	178431414	178451231	-	ENST00000325748.8@PRKRA	ENST00000325748.8	protein_coding	178450966,178450242,178447505,178444422,178443267,178441610,178436145,178431414	178451231,178450411,178447586,178444500,178443384,178441704,178436319,178432254	Gene ID= ENSG00000180228.12 TPM= 75.94 Transcript Type= protein_coding
chr2	178480477	178505056	178480477	178505056	+	transcript5498.chr2.nic@PLEKHA3	transcript5498.chr2.nic	protein_coding	178480477,178485641,178488968,178490659,178493853,178495496,178499211,178501061,178503760	178480909,178485757,178489014,178490814,178493989,178495660,178499254,178501176,178505056	Gene ID= ENSG00000116095.10 TPM= 3.19 Transcript Type= NA
chr2	178480489	178490813	178480489	178490813	+	transcript5503.chr2.nic@PLEKHA3	transcript5503.chr2.nic	protein_coding	178480489,178485641,178490659	178480909,178485757,178490813	Gene ID= ENSG00000116095.10 TPM= 4.25 Transcript Type= NA
chr2	178780081	178807504	178780081	178807504	-	transcript5515.chr2.nic@TTN	transcript5515.chr2.nic	protein_coding	178807212,178804552,178802138,178800395,178799825,178799487,178794922,178794399,178793404,178792072,178790708,178789978,178789360,178785848,178785620,178784070,178783720,178782806,178782539,178782212,178781121,178780081	178807504,178804655,178802341,178800682,178799910,178799731,178795252,178794551,178793541,178792197,178790845,178790115,178789497,178786141,178785742,178784351,178783785,178783064,178782602,178782427,178781263,178780205	Gene ID= ENSG00000155657.26 TPM= 171.24 Transcript Type= NA
chr2	178549359	178567257	178549359	178567257	-	transcript5523.chr2.nic@TTN	transcript5523.chr2.nic	protein_coding	178559311,178558341,178557648,178557253,178556848,178554865,178554453,178553914,178553502,178551630,178550967,178549986,178549570,178549359	178567257,178558637,178558235,178557555,178557144,178555152,178554752,178554216,178553807,178553396,178551260,178550273,178549869,178549473	Gene ID= ENSG00000155657.26 TPM= 180.57 Transcript Type= NA
chr2	178525989	178533612	178525989	178533612	-	transcript5570.chr2.nnic@TTN	transcript5570.chr2.nnic	protein_coding	178530241,178528528,178528274,178527446,178526539,178525989	178533612,178529219,178528427,178527748,178527307,178526469	Gene ID= ENSG00000155657.26 TPM= 48.86 Transcript Type= NA
chr2	178798495	178807408	178798495	178807408	-	ENST00000470257.1@TTN	ENST00000470257.1	protein_coding	178807212,178804552,178802138,178800395,178799825,178798495	178807408,178804655,178802341,178800682,178799910,178799731	Gene ID= ENSG00000155657.26 TPM= 9.93 Transcript Type= retained_intron
chr2	178533001	178535871	178533001	178535871	+	transcript5587.chr2.nnic@NA	transcript5587.chr2.nnic	NA	178533001	178535871	Gene ID= novel_gene_chr2_5588 TPM= 33.99 Transcript Type= NA
chr2	178568043	178575537	178568043	178575537	-	transcript5595.chr2.nnic@NA	transcript5595.chr2.nnic	NA	178568043	178575537	Gene ID= novel_gene_chr2_5596 TPM= 84.97 Transcript Type= NA
chr2	178649129	178654412	178649129	178654412	-	transcript5605.chr2.nnic@NA	transcript5605.chr2.nnic	NA	178649129	178654412	Gene ID= novel_gene_chr2_5606 TPM= 7.44 Transcript Type= NA
chr2	178664927	178668747	178664927	178668747	+	transcript5589.chr2.nnic@NA	transcript5589.chr2.nnic	NA	178664927	178668747	Gene ID= novel_gene_chr2_5590 TPM= 21.24 Transcript Type= NA
chr2	178686115	178688437	178686115	178688437	-	transcript5653.chr2.nnic@NA	transcript5653.chr2.nnic	NA	178686115	178688437	Gene ID= novel_gene_chr2_5654 TPM= 6.37 Transcript Type= NA
chr2	178724724	178729730	178724724	178729730	-	transcript5655.chr2.nnic@NA	transcript5655.chr2.nnic	NA	178724724	178729730	Gene ID= novel_gene_chr2_5656 TPM= 6.37 Transcript Type= NA
chr2	178742592	178747233	178742592	178747233	-	transcript5603.chr2.nnic@NA	transcript5603.chr2.nnic	NA	178742592	178747233	Gene ID= novel_gene_chr2_5604 TPM= 11.68 Transcript Type= NA
chr2	178835756	179050075	178835756	179050075	-	transcript5657.chr2.nic@CCDC141	transcript5657.chr2.nic	protein_coding	179049840,179047284,178978484,178975057,178961230,178944535,178918713,178905329,178888527,178886752,178884901,178877964,178872133,178871427,178869117,178868026,178865767,178856257,178855347,178853441,178850049,178845626,178835756	179050075,179047406,178978675,178975165,178961483,178944651,178918907,178905501,178888668,178886871,178885092,178878143,178872312,178871552,178869305,178868205,178865916,178856397,178855541,178853624,178850161,178845742,178837744	Gene ID= ENSG00000163492.14 TPM= 39.48 Transcript Type= NA
chr2	179047231	179049955	179047231	179049955	-	transcript5665.chr2.nic@CCDC141	transcript5665.chr2.nic	protein_coding	179049840,179047231	179049955,179047406	Gene ID= ENSG00000163492.14 TPM= 2.12 Transcript Type= NA
chr2	178872133	179050086	178872133	179050086	-	ENST00000446116.5@CCDC141	ENST00000446116.5	protein_coding	179049840,179047284,178978484,178975057,178961230,178944535,178905329,178888527,178886752,178884901,178877964,178872133	179050086,179047406,178978675,178975165,178961483,178944651,178905501,178888668,178886871,178885092,178878143,178872312	Gene ID= ENSG00000163492.14 TPM= 1.06 Transcript Type= protein_coding
chr2	178856257	179050063	178856257	179050063	-	ENST00000443758.5@CCDC141	ENST00000443758.5	protein_coding	179049840,179047284,178978484,178975057,178961230,178944535,178918713,178905329,178888527,178886752,178884901,178877964,178872133,178871427,178869117,178868026,178865767,178856257	179050063,179047406,178978675,178975165,178961483,178944651,178918907,178905501,178888668,178886871,178885092,178878143,178872312,178871552,178869305,178868205,178865916,178856397	Gene ID= ENSG00000163492.14 TPM= 26.2 Transcript Type= protein_coding
chr2	178830935	178832490	178830935	178832490	+	transcript5667.chr2.nnic@NA	transcript5667.chr2.nnic	NA	178830935	178832490	Gene ID= novel_gene_chr2_5668 TPM= 20.18 Transcript Type= NA
chr2	179482727	179594502	179482727	179594502	-	transcript5678.chr2.nnic@ZNF385B	transcript5678.chr2.nnic	protein_coding	179594426,179576116,179544827,179522882,179518528,179486791,179485973,179485441,179482727	179594502,179576267,179544969,179522920,179518638,179487907,179486004,179485572,179483434	Gene ID= ENSG00000144331.18 TPM= 2.12 Transcript Type= NA
chr2	179944879	180007108	179944879	180007108	-	transcript5686.chr2.nnic@CWC22	transcript5686.chr2.nnic	protein_coding	180007070,179993315,179988577,179986695,179981752,179978190,179973634,179973193,179970941,179970650,179970501,179965878,179964547,179959022,179954957,179954205,179952471,179944879	180007108,179993454,179988644,179986805,179981997,179978318,179973802,179973246,179971076,179970856,179970563,179965982,179964628,179959082,179955034,179954357,179952598,179945715	Gene ID= ENSG00000163510.13 TPM= 5.31 Transcript Type= NA
chr2	179945621	180007113	179945621	180007113	-	ENST00000404136.2@CWC22	ENST00000404136.2	protein_coding	180007070,179993315,179988577,179986695,179981752,179978190,179973634,179973193,179970941,179970650,179970501,179965878,179964547,179959022,179954957,179954205,179952471,179950825,179950512,179945621	180007113,179993454,179988644,179986805,179981997,179978318,179973802,179973246,179971076,179970856,179970563,179965982,179964628,179959082,179955034,179954357,179952598,179950926,179950732,179945715	Gene ID= ENSG00000163510.13 TPM= 11.68 Transcript Type= protein_coding
chr2	180980360	181063424	180980360	181063424	+	transcript5692.chr2.nic@UBE2E3	transcript5692.chr2.nic	protein_coding	180980360,180980942,180982018,180984043,181057693,181060665,181062791	180980546,180980973,180982236,180984093,181057825,181060812,181063424	Gene ID= ENSG00000170035.15 TPM= 14.69 Transcript Type= NA
chr2	180981058	181063424	180981058	181063424	+	transcript5695.chr2.nic@UBE2E3	transcript5695.chr2.nic	protein_coding	180981058,180982018,180984043,181057693,181060665,181062791	180981385,180982236,180984093,181057825,181060812,181063424	Gene ID= ENSG00000170035.15 TPM= 9.38 Transcript Type= NA
chr2	180980606	181063441	180980606	181063441	+	ENST00000410062.8@UBE2E3	ENST00000410062.8	protein_coding	180980606,180982018,180984043,181057693,181060665,181062791	180980973,180982236,180984093,181057825,181060812,181063441	Gene ID= ENSG00000170035.15 TPM= 56.65 Transcript Type= protein_coding
chr2	180996667	180999639	180996667	180999639	+	transcript5698.chr2.nnic@NA	transcript5698.chr2.nnic	NA	180996667	180999639	Gene ID= novel_gene_chr2_5699 TPM= 2.12 Transcript Type= NA
chr2	181891713	181930738	181891713	181930738	+	transcript5708.chr2.nnic@SSFA2	transcript5708.chr2.nnic	protein_coding	181891713,181892615,181896030,181896908,181898880,181899014,181900696,181901766,181909899,181913845,181915216,181916600,181918598,181918755,181919296,181920597,181921948,181928161,181929561	181892277,181892660,181896079,181896964,181898919,181899112,181900904,181902466,181909971,181913933,181916427,181917005,181918675,181918882,181919446,181920662,181922412,181928278,181930738	Gene ID= ENSG00000138434.16 TPM= 4.78 Transcript Type= NA
chr2	181891713	181930738	181891713	181930738	+	transcript5710.chr2.nnic@SSFA2	transcript5710.chr2.nnic	protein_coding	181891713,181892615,181896030,181896908,181898880,181899014,181900696,181901766,181909899,181913845,181915216,181916838,181918598,181918755,181919296,181920597,181921948,181928161,181929561	181892277,181892660,181896079,181896964,181898919,181899112,181900904,181902466,181909971,181913933,181916427,181917005,181918675,181918882,181919446,181920662,181922412,181928278,181930738	Gene ID= ENSG00000138434.16 TPM= 7.97 Transcript Type= NA
chr2	181891833	181894695	181891833	181894695	+	ENST00000480753.1@SSFA2	ENST00000480753.1	protein_coding	181891833,181892615	181892277,181894695	Gene ID= ENSG00000138434.16 TPM= 13.81 Transcript Type= retained_intron
chr2	181891985	181930738	181891985	181930738	+	ENST00000409001.5@SSFA2	ENST00000409001.5	protein_coding	181891985,181892615,181896030,181896908,181898880,181899014,181900696,181901766,181909899,181913845,181915216,181918598,181918755,181919296,181921948,181928161,181929561	181892277,181892660,181896079,181896964,181898919,181899112,181900904,181902466,181909971,181913933,181916427,181918675,181918882,181919446,181922412,181928278,181930738	Gene ID= ENSG00000138434.16 TPM= 2.12 Transcript Type= protein_coding
chr2	181985868	182131398	181985868	182131398	+	ENST00000409137.7@PPP1R1C	ENST00000409137.7	protein_coding	181985868,181987839,182061442,182063731,182117207,182128974	181986191,181987899,182061479,182063791,182117301,182131398	Gene ID= ENSG00000150722.10 TPM= 4.25 Transcript Type= protein_coding
chr2	181985877	182130018	181985877	182130018	+	ENST00000280295.7@PPP1R1C	ENST00000280295.7	protein_coding	181985877,181987818,182061442,182063731,182117207,182128974	181986191,181987899,182061479,182063791,182117301,182130018	Gene ID= ENSG00000150722.10 TPM= 4.25 Transcript Type= protein_coding
chr2	181985805	181987367	181985805	181987367	+	transcript5741.chr2.nnic@NA	transcript5741.chr2.nnic	NA	181985805	181987367	Gene ID= novel_gene_chr2_5742 TPM= 2.12 Transcript Type= NA
chr2	182142611	182427043	182142611	182427043	-	transcript5745.chr2.nic@PDE1A	transcript5745.chr2.nic	protein_coding	182426578,182264301,182240110,182234432,182231015,182230006,182223864,182205940,182201688,182201439,182188979,182186468,182185892,182147036,182142611	182427043,182264414,182240292,182234498,182231131,182230146,182223964,182206065,182201789,182201559,182189060,182186588,182186079,182147152,182143038	Gene ID= ENSG00000115252.18 TPM= 4.25 Transcript Type= NA
chr2	182167887	182427048	182167887	182427048	-	ENST00000351439.9@PDE1A	ENST00000351439.9	protein_coding	182426578,182264301,182240110,182234432,182231015,182230006,182223864,182205940,182201688,182201439,182188979,182186468,182185892,182167887	182427048,182264414,182240292,182234498,182231131,182230146,182223964,182206065,182201789,182201559,182189060,182186588,182186079,182168290	Gene ID= ENSG00000115252.18 TPM= 9.56 Transcript Type= protein_coding
chr2	182199887	182427043	182199887	182427043	-	transcript5749.chr2.nic@PDE1A	transcript5749.chr2.nic	protein_coding	182426578,182264301,182240110,182234432,182231015,182230006,182223864,182205940,182201688,182199887	182427043,182264414,182240292,182234498,182231131,182230146,182223964,182206065,182201789,182201559	Gene ID= ENSG00000115252.18 TPM= 5.31 Transcript Type= NA
chr2	182716041	182780025	182716041	182780025	+	ENST00000616986.4@DNAJC10	ENST00000616986.4	protein_coding	182716041,182717016,182717941,182720007,182722025,182728576,182728863,182729848,182731030,182732499,182740299,182741243,182743598,182751658,182752072,182755003,182756314,182757692,182758837,182759160,182762682,182775316,182777121	182716483,182717072,182718290,182720169,182722075,182728658,182728994,182729941,182731107,182732542,182740388,182741356,182743712,182751785,182752188,182755104,182756469,182757825,182758890,182759307,182762801,182775420,182780025	Gene ID= ENSG00000077232.17 TPM= 2.12 Transcript Type= protein_coding
chr2	182781295	182783992	182781295	182783992	+	transcript5777.chr2.nnic@NA	transcript5777.chr2.nnic	NA	182781295	182783992	Gene ID= novel_gene_chr2_5778 TPM= 2.12 Transcript Type= NA
chr2	182833275	182867162	182833275	182867162	-	ENST00000295113.4@FRZB	ENST00000295113.4	protein_coding	182866075,182858786,182842478,182838409,182837948,182833275	182867162,182858833,182842543,182838613,182838011,182834965	Gene ID= ENSG00000162998.4 TPM= 1.06 Transcript Type= protein_coding
chr2	182924877	183038858	182924877	183038858	-	ENST00000360982.2@NCKAP1	ENST00000360982.2	protein_coding	183037992,183024978,183023806,183003233,183002974,183002127,183001953,182995701,182994839,182989030,182986171,182983286,182982821,182981244,182978834,182976893,182967216,182964676,182962159,182957457,182956462,182953113,182952793,182952405,182942070,182935293,182934752,182930695,182928783,182928117,182926816,182924877	183038858,183024995,183023916,183003325,183003030,183002269,183002043,182995838,182994887,182989186,182986227,182983382,182982927,182981376,182978915,182976951,182967361,182964808,182962278,182957596,182956593,182953331,182952923,182952502,182942163,182935375,182934832,182930788,182928899,182928226,182926905,182925818	Gene ID= ENSG00000061676.14 TPM= 111 Transcript Type= protein_coding
chr2	182909115	183038472	182909115	183038472	-	ENST00000361354.8@NCKAP1	ENST00000361354.8	protein_coding	183037992,183023806,183003233,183002974,183002127,183001953,182995701,182994839,182989030,182986171,182983286,182982821,182981244,182978834,182976893,182967216,182964676,182962159,182957457,182956462,182953113,182952793,182952405,182942070,182935293,182934752,182930695,182928783,182928117,182926816,182909115	183038472,183023916,183003325,183003030,183002269,183002043,182995838,182994887,182989186,182986227,182983382,182982927,182981376,182978915,182976951,182967361,182964808,182962278,182957596,182956593,182953331,182952923,182952502,182942163,182935375,182934832,182930788,182928899,182928226,182926905,182925818	Gene ID= ENSG00000061676.14 TPM= 6.37 Transcript Type= protein_coding
chr2	183078759	183100005	183078759	183100005	+	ENST00000354221.4@DUSP19	ENST00000354221.4	protein_coding	183078759,183083508,183087040,183095431	183079159,183083554,183087192,183100005	Gene ID= ENSG00000162999.12 TPM= 6.37 Transcript Type= protein_coding
chr2	183124355	183161680	183124355	183161680	+	ENST00000295119.8@NUP35	ENST00000295119.8	protein_coding	183124355,183128287,183130418,183133566,183151508,183157444,183158283,183159488,183161054	183124497,183128457,183130545,183133623,183151649,183157513,183158411,183159652,183161680	Gene ID= ENSG00000163002.12 TPM= 4.25 Transcript Type= protein_coding
chr2	186486256	186509363	186486256	186509363	+	transcript5820.chr2.nic@ZC3H15	transcript5820.chr2.nic	protein_coding	186486256,186495233,186500182,186501273,186502496,186504032,186505451,186505740,186506713,186508543	186486457,186495334,186500293,186501425,186502552,186504214,186505597,186505841,186506836,186509363	Gene ID= ENSG00000065548.17 TPM= 3.37 Transcript Type= NA
chr2	186486156	186509363	186486156	186509363	+	ENST00000337859.10@ZC3H15	ENST00000337859.10	protein_coding	186486156,186495233,186500182,186501273,186502496,186504032,186505451,186505740,186506713,186508543	186486457,186495334,186500293,186501425,186502587,186504214,186505597,186505841,186506836,186509363	Gene ID= ENSG00000065548.17 TPM= 63.91 Transcript Type= protein_coding
chr2	186486256	186509363	186486256	186509363	+	transcript5822.chr2.nnic@ZC3H15	transcript5822.chr2.nnic	protein_coding	186486256,186495233,186500182,186501273,186502496,186504032,186505740,186506713,186508543	186486457,186495334,186500293,186501425,186502587,186504214,186505841,186506836,186509363	Gene ID= ENSG00000065548.17 TPM= 2.84 Transcript Type= NA
chr2	186486267	186495319	186486267	186495319	+	ENST00000477672.1@ZC3H15	ENST00000477672.1	protein_coding	186486267,186495207	186486457,186495319	Gene ID= ENSG00000065548.17 TPM= 1.06 Transcript Type= processed_transcript
chr2	186590014	186593072	186590014	186593072	+	transcript5844.chr2.nnic@NA	transcript5844.chr2.nnic	NA	186590014	186593072	Gene ID= novel_gene_chr2_5845 TPM= 2.12 Transcript Type= NA
chr2	186607925	186680901	186607925	186680901	+	transcript5836.chr2.nnic@ITGAV	transcript5836.chr2.nnic	protein_coding	186607925,186622339,186625473,186630797,186633329,186636082,186637065,186638277,186638409,186640915,186641386,186646686,186649840,186651982,186654650,186656247,186659038,186663768,186664494,186665126,186666704,186667150,186667671,186668762,186669701,186675604,186675820,186676813,186677197	186608168,186622430,186625587,186630858,186633374,186636207,186637109,186638320,186638465,186640967,186641588,186646877,186649885,186652089,186654708,186656401,186659175,186663835,186664641,186665218,186666783,186667230,186667776,186668920,186669814,186675717,186675927,186676935,186680901	Gene ID= ENSG00000138448.11 TPM= 15.93 Transcript Type= NA
chr2	186590056	186646726	186590056	186646726	+	transcript5842.chr2.nic@ITGAV	transcript5842.chr2.nic	protein_coding	186590056,186602021,186622339,186625473,186630797,186633329,186636082,186637065,186638277,186638409,186640915,186641386,186646686	186590523,186602151,186622430,186625587,186630858,186633374,186636207,186637109,186638320,186638465,186640967,186641588,186646726	Gene ID= ENSG00000138448.11 TPM= 3.19 Transcript Type= NA
chr2	186590065	186680901	186590065	186680901	+	ENST00000261023.7@ITGAV	ENST00000261023.7	protein_coding	186590065,186602021,186622339,186625473,186630797,186633329,186636082,186637065,186638277,186638409,186640915,186641386,186646686,186649840,186651982,186654650,186656247,186659038,186663768,186664494,186665126,186666704,186667150,186667671,186668762,186669701,186675604,186675820,186676813,186677197	186590523,186602151,186622430,186625587,186630858,186633374,186636207,186637109,186638320,186638465,186640967,186641588,186646877,186649885,186652089,186654708,186656401,186659175,186663835,186664641,186665218,186666783,186667230,186667776,186668920,186669814,186675717,186675927,186676935,186680901	Gene ID= ENSG00000138448.11 TPM= 81.79 Transcript Type= protein_coding
chr2	187343129	187448460	187343129	187448460	-	ENST00000409998.5@CALCRL	ENST00000409998.5	protein_coding	187448039,187431297,187387666,187387329,187385545,187383173,187380677,187380467,187378940,187363376,187360598,187359212,187359063,187352114,187351920,187343129	187448460,187431364,187387756,187387493,187385631,187383305,187380787,187380579,187379031,187363502,187360751,187359272,187359129,187352332,187351961,187346399	Gene ID= ENSG00000064989.12 TPM= 3.19 Transcript Type= protein_coding
chr2	187343129	187448460	187343129	187448460	-	ENST00000392370.7@CALCRL	ENST00000392370.7	protein_coding	187448039,187387666,187387329,187385545,187383173,187380677,187380467,187378940,187363376,187360598,187359212,187359063,187352114,187351920,187343129	187448460,187387756,187387493,187385631,187383305,187380787,187380579,187379031,187363502,187360751,187359272,187359129,187352332,187351961,187346399	Gene ID= ENSG00000064989.12 TPM= 2.12 Transcript Type= protein_coding
chr2	187461846	187526890	187461846	187526890	+	transcript5868.chr2.nnic@AC007319.1	transcript5868.chr2.nnic	antisense_RNA	187461846,187499506,187526822	187462016,187499605,187526890	Gene ID= ENSG00000224063.5 TPM= 2.12 Transcript Type= NA
chr2	187464261	187554492	187464261	187554492	-	ENST00000233156.8@TFPI	ENST00000233156.8	protein_coding	187554200,187503648,187496881,187488337,187484811,187484124,187467753,187464261	187554492,187503770,187497078,187488375,187484987,187484216,187467932,187467042	Gene ID= ENSG00000003436.15 TPM= 2.12 Transcript Type= protein_coding
chr2	187552153	187554436	187552153	187554436	-	transcript5870.chr2.nnic@NA	transcript5870.chr2.nnic	NA	187552153	187554436	Gene ID= novel_gene_chr2_5871 TPM= 2.12 Transcript Type= NA
chr2	188291669	188595059	188291669	188595059	+	ENST00000409843.5@GULP1	ENST00000409843.5	protein_coding	188291669,188383763,188477659,188483431,188522756,188529097,188541181,188569239,188570028,188584265,188587855,188589740,188593940	188292166,188383889,188477730,188483492,188522827,188529195,188541318,188569355,188570120,188584403,188587949,188589750,188595059	Gene ID= ENSG00000144366.15 TPM= 1.06 Transcript Type= protein_coding
chr2	188292772	188595931	188292772	188595931	+	ENST00000359135.7@GULP1	ENST00000359135.7	protein_coding	188292772,188383763,188477659,188483431,188522756,188529097,188541181,188569239,188570028,188584265,188587855,188593940	188293112,188383889,188477730,188483492,188522827,188529195,188541318,188569355,188570120,188584403,188587949,188595931	Gene ID= ENSG00000144366.15 TPM= 1.06 Transcript Type= protein_coding
chr2	188974320	189012746	188974320	189012746	+	ENST00000304636.7@COL3A1	ENST00000304636.7	protein_coding	188974320,188984760,188985197,188985665,188987059,188988081,188988590,188989396,188990096,188990307,188991004,188991487,188991669,188992184,188992887,188993361,188994038,188994234,188994541,188994724,188995046,188995692,188996125,188996398,188997165,188997336,188997700,188998266,188998674,188999285,188999470,188999842,189001397,189001536,189002298,189002955,189003411,189003734,189003982,189004257,189005350,189006206,189006345,189006937,189007500,189007885,189008035,189008924,189010178,189010648,189011628	188974568,188984962,188985247,188985778,188987139,188988134,188988643,188989449,188990149,188990360,188991057,188991531,188991722,188992228,188992940,188993459,188994082,188994332,188994594,188994831,188995099,188995790,188996178,188996496,188997218,188997389,188997753,188998319,188998718,188999383,188999577,188999895,189001450,189001589,189002351,189003062,189003464,189003787,189004143,189004364,189005457,189006259,189006452,189006990,189007607,189007938,189008142,189009221,189010365,189010890,189012746	Gene ID= ENSG00000168542.14 TPM= 113.65 Transcript Type= protein_coding
chr2	189031896	189179879	189031896	189179879	-	ENST00000374866.7@COL5A2	ENST00000374866.7	protein_coding	189179508,189110225,189104264,189100107,189098727,189097277,189092310,189088695,189086726,189085719,189085160,189083984,189080990,189079978,189079063,189078516,189075393,189072040,189068786,189068226,189068015,189066729,189066390,189065004,189064557,189063980,189063172,189063010,189062865,189061562,189060730,189058849,189058429,189057320,189056973,189054159,189053895,189053424,189052911,189052749,189052172,189051320,189050569,189049347,189048209,189045800,189045179,189043151,189042720,189041586,189039272,189036616,189034916,189031896	189179879,189110449,189104277,189100139,189098759,189097330,189092420,189088772,189086770,189085772,189085213,189084037,189081043,189080031,189079107,189078569,189075437,189072093,189068884,189068270,189068113,189066782,189066497,189065057,189064655,189064033,189063270,189063063,189062918,189061615,189060783,189058893,189058527,189057427,189057026,189054212,189053948,189053477,189053018,189052802,189052225,189051481,189050676,189049454,189048262,189045907,189045232,189043258,189042773,189041693,189039563,189036803,189035155,189034216	Gene ID= ENSG00000204262.11 TPM= 1.06 Transcript Type= protein_coding
chr2	189441433	189475565	189441433	189475565	+	ENST00000314761.8@WDR75	ENST00000314761.8	protein_coding	189441433,189448379,189450903,189451805,189455320,189457311,189458753,189459336,189462484,189463694,189463846,189465079,189466425,189467468,189468475,189469344,189470076,189470819,189474186,189474717,189475213	189441578,189448508,189450968,189451895,189455444,189457381,189458872,189459424,189462642,189463753,189463961,189465254,189466582,189467648,189468569,189469439,189470245,189470878,189474332,189474808,189475565	Gene ID= ENSG00000115368.9 TPM= 18.06 Transcript Type= protein_coding
chr2	189560579	189580887	189560579	189580887	-	ENST00000261024.6@SLC40A1	ENST00000261024.6	protein_coding	189580418,189579813,189575161,189572846,189571715,189565354,189563584,189560579	189580887,189579880,189575320,189572961,189571841,189565599,189564225,189562191	Gene ID= ENSG00000138449.10 TPM= 225.18 Transcript Type= protein_coding
chr2	189661420	189670831	189661420	189670831	+	ENST00000260952.8@ASNSD1	ENST00000260952.8	protein_coding	189661420,189663901,189665376,189666041,189667764,189670441	189661610,189663954,189665451,189667596,189667945,189670831	Gene ID= ENSG00000138381.9 TPM= 53.64 Transcript Type= protein_coding
chr2	189661420	189670831	189661420	189670831	+	transcript5920.chr2.nic@ASNSD1	transcript5920.chr2.nic	protein_coding	189661420,189663901,189665422,189666041,189667764,189670441	189661610,189663954,189665451,189667596,189667945,189670831	Gene ID= ENSG00000138381.9 TPM= 16.46 Transcript Type= NA
chr2	189661420	189670831	189661420	189670831	+	transcript5922.chr2.nic@ASNSD1	transcript5922.chr2.nic	protein_coding	189661420,189663901,189665376,189670441	189661610,189663954,189667945,189670831	Gene ID= ENSG00000138381.9 TPM= 2.12 Transcript Type= NA
chr2	189746660	189762770	189746660	189762770	-	transcript5930.chr2.nic@OSGEPL1	transcript5930.chr2.nic	protein_coding	189762567,189761420,189755173,189754141,189753916,189752849,189752653,189750550,189746660	189762770,189761660,189755560,189754345,189754064,189752979,189752724,189750656,189747331	Gene ID= ENSG00000128694.11 TPM= 2.66 Transcript Type= NA
chr2	189746660	189762778	189746660	189762778	-	transcript5931.chr2.nic@OSGEPL1	transcript5931.chr2.nic	protein_coding	189762685,189761420,189755173,189754141,189753916,189752849,189752653,189750550,189746660	189762778,189761660,189755560,189754345,189754064,189752979,189752724,189750656,189747331	Gene ID= ENSG00000128694.11 TPM= 4.78 Transcript Type= NA
chr2	189746660	189762767	189746660	189762767	-	ENST00000264151.9@OSGEPL1	ENST00000264151.9	protein_coding	189762685,189761420,189755173,189754141,189753916,189752849,189752653,189750550,189746660	189762767,189761660,189755560,189754345,189754064,189752979,189752724,189750656,189747168	Gene ID= ENSG00000128694.11 TPM= 5.31 Transcript Type= protein_coding
chr2	189769419	189773734	189769419	189773734	+	transcript5963.chr2.nnic@NA	transcript5963.chr2.nnic	NA	189769419	189773734	Gene ID= novel_gene_chr2_5964 TPM= 4.25 Transcript Type= NA
chr2	189771312	189784371	189771312	189784371	-	ENST00000392349.8@ORMDL1	ENST00000392349.8	protein_coding	189784269,189783014,189782422,189775565,189771312	189784371,189783123,189782602,189775716,189771902	Gene ID= ENSG00000128699.13 TPM= 7.44 Transcript Type= protein_coding
chr2	189770323	189784364	189770323	189784364	-	ENST00000392350.7@ORMDL1	ENST00000392350.7	protein_coding	189784269,189782422,189775565,189770323	189784364,189782602,189775716,189771902	Gene ID= ENSG00000128699.13 TPM= 5.31 Transcript Type= protein_coding
chr2	189771312	189784335	189771312	189784335	-	transcript5956.chr2.nic@ORMDL1	transcript5956.chr2.nic	protein_coding	189783014,189782422,189775565,189771312	189784335,189782602,189775716,189771902	Gene ID= ENSG00000128699.13 TPM= 4.25 Transcript Type= NA
chr2	189771312	189784347	189771312	189784347	-	transcript5958.chr2.nic@ORMDL1	transcript5958.chr2.nic	protein_coding	189784269,189782422,189775565,189771312	189784347,189783123,189775716,189771902	Gene ID= ENSG00000128699.13 TPM= 2.12 Transcript Type= NA
chr2	189784495	189877627	189784495	189877627	+	transcript5939.chr2.nnic@PMS1	transcript5939.chr2.nnic	protein_coding	189784495,189785346,189791790,189795769,189805652,189818017,189843964,189852655,189853939,189854239,189863743,189867799,189873496,189877272	189784593,189785471,189791941,189795951,189805754,189818180,189844080,189852777,189854082,189855128,189864228,189867929,189873656,189877627	Gene ID= ENSG00000064933.17 TPM= 2.12 Transcript Type= NA
chr2	189784381	189877629	189784381	189877629	+	ENST00000441310.6@PMS1	ENST00000441310.6	protein_coding	189784381,189791790,189795769,189805652,189818017,189843964,189852655,189853939,189854239,189863743,189867799,189873496,189877272	189784593,189791941,189795951,189805754,189818180,189844080,189852777,189854082,189855128,189864228,189867929,189873656,189877629	Gene ID= ENSG00000064933.17 TPM= 6.37 Transcript Type= protein_coding
chr2	190180366	190310360	190180366	190310360	+	transcript5992.chr2.nnic@C2orf88	transcript5992.chr2.nnic	protein_coding	190180366,190245309,190309926	190181109,190245395,190310360	Gene ID= ENSG00000187699.10 TPM= 2.12 Transcript Type= NA
chr2	190180863	190203484	190180863	190203484	+	ENST00000340623.4@C2orf88	ENST00000340623.4	protein_coding	190180863,190199697	190181109,190203484	Gene ID= ENSG00000187699.10 TPM= 10.62 Transcript Type= protein_coding
chr2	190180955	190200214	190180955	190200214	+	ENST00000443551.2@C2orf88	ENST00000443551.2	protein_coding	190180955,190199697	190181128,190200214	Gene ID= ENSG00000187699.10 TPM= 2.12 Transcript Type= protein_coding
chr2	190204635	190319879	190204635	190319879	-	transcript5966.chr2.nic@HIBCH	transcript5966.chr2.nic	protein_coding	190319716,190310754,190296813,190294546,190290405,190287586,190261156,190252162,190249640,190246154,190244887,190212956,190208880,190205100,190204635	190319879,190310796,190296953,190294630,190290485,190287638,190261234,190252307,190249726,190246212,190244968,190213075,190208913,190205232,190204802	Gene ID= ENSG00000198130.15 TPM= 5.74 Transcript Type= NA
chr2	190204634	190320045	190204634	190320045	-	ENST00000359678.9@HIBCH	ENST00000359678.9	protein_coding	190319716,190310754,190296813,190294546,190290405,190287586,190261156,190252162,190249640,190246154,190244887,190212956,190208880,190204634	190320045,190310796,190296953,190294630,190290485,190287638,190261234,190252307,190249726,190246212,190244968,190213075,190208913,190205232	Gene ID= ENSG00000198130.15 TPM= 29.1 Transcript Type= protein_coding
chr2	190204634	190319879	190204634	190319879	-	transcript5974.chr2.nnic@HIBCH	transcript5974.chr2.nnic	protein_coding	190319716,190310754,190296813,190294546,190290405,190287586,190261156,190252162,190249640,190246154,190244887,190208880,190204634	190319879,190310796,190296953,190294630,190290485,190287638,190261234,190252307,190249726,190246212,190244968,190208913,190205232	Gene ID= ENSG00000198130.15 TPM= 6.8 Transcript Type= NA
chr2	190203921	190319890	190203921	190319890	-	ENST00000392332.7@HIBCH	ENST00000392332.7	protein_coding	190319716,190310754,190296813,190294546,190290405,190287586,190261156,190252162,190249640,190246154,190244887,190212956,190203921	190319890,190310796,190296953,190294630,190290485,190287638,190261234,190252307,190249726,190246212,190244968,190213075,190205232	Gene ID= ENSG00000198130.15 TPM= 7.86 Transcript Type= protein_coding
chr2	190204910	190319879	190204910	190319879	-	transcript5981.chr2.nnic@HIBCH	transcript5981.chr2.nnic	protein_coding	190319716,190310754,190296813,190294546,190290405,190287586,190261156,190252162,190249640,190246154,190244887,190204910	190319879,190310796,190296953,190294630,190290485,190287638,190261234,190252307,190249726,190246212,190244968,190205232	Gene ID= ENSG00000198130.15 TPM= 2.55 Transcript Type= NA
chr2	190343470	190371664	190343470	190371664	+	ENST00000392329.6@INPP1	ENST00000392329.6	protein_coding	190343470,190348888,190360039,190362627,190366695,190369103,190370844	190343961,190349031,190360306,190362687,190366895,190369277,190371664	Gene ID= ENSG00000151689.12 TPM= 6.37 Transcript Type= protein_coding
chr2	190343570	190371665	190343570	190371665	+	ENST00000322522.8@INPP1	ENST00000322522.8	protein_coding	190343570,190360039,190362627,190366695,190369103,190370844	190343961,190360306,190362687,190366895,190369277,190371665	Gene ID= ENSG00000151689.12 TPM= 23.37 Transcript Type= protein_coding
chr2	190408124	190502074	190408124	190502074	+	transcript6006.chr2.nic@MFSD6	transcript6006.chr2.nic	protein_coding	190408124,190435977,190469758,190488657,190489768,190497439,190500015	190408503,190437561,190469855,190488818,190489866,190497719,190502074	Gene ID= ENSG00000151690.14 TPM= 7.44 Transcript Type= NA
chr2	190454092	190534778	190454092	190534778	-	transcript5999.chr2.nnic@NEMP2	transcript5999.chr2.nnic	protein_coding	190534559,190525263,190518952,190518736,190517520,190516270,190514453,190510361,190454092	190534778,190525378,190519183,190518808,190517613,190516384,190514678,190510537,190455571	Gene ID= ENSG00000189362.11 TPM= 3.19 Transcript Type= NA
chr2	190648791	190692766	190648791	190692766	+	transcript6011.chr2.nnic@NAB1	transcript6011.chr2.nnic	protein_coding	190648791,190659158,190670326,190673101,190683738,190685476,190687201,190690245	190648958,190659995,190670459,190673152,190683827,190685638,190687317,190692766	Gene ID= ENSG00000138386.16 TPM= 8.5 Transcript Type= NA
chr2	190880818	190913588	190880818	190913588	+	transcript6040.chr2.nic@GLS	transcript6040.chr2.nic	protein_coding	190880818,190895152,190895604,190900564,190901947,190905004,190910263,190913193	190881470,190895248,190895725,190900693,190902026,190905167,190910321,190913588	Gene ID= ENSG00000115419.12 TPM= 2.12 Transcript Type= NA
chr2	190880834	190935289	190880834	190935289	+	ENST00000338435.8@GLS	ENST00000338435.8	protein_coding	190880834,190895152,190895604,190900564,190901947,190905004,190910263,190921024,190921145,190923917,190924543,190927306,190930437,190931545,190932716	190881470,190895248,190895725,190900693,190902026,190905167,190910321,190921056,190921203,190923983,190924593,190927482,190930568,190931637,190935289	Gene ID= ENSG00000115419.12 TPM= 29.74 Transcript Type= protein_coding
chr2	190880827	190965552	190880827	190965552	+	ENST00000320717.7@GLS	ENST00000320717.7	protein_coding	190880827,190895152,190895604,190900564,190901947,190905004,190910263,190921024,190921145,190923917,190924543,190927306,190930437,190931545,190953565,190954584,190954755,190962830	190881470,190895248,190895725,190900693,190902026,190905167,190910321,190921056,190921203,190923983,190924593,190927482,190930568,190931637,190953626,190954660,190954818,190965552	Gene ID= ENSG00000115419.12 TPM= 8.5 Transcript Type= protein_coding
chr2	190894372	190896029	190894372	190896029	-	transcript6051.chr2.nnic@NA	transcript6051.chr2.nnic	NA	190894372	190896029	Gene ID= novel_gene_chr2_6052 TPM= 2.12 Transcript Type= NA
chr2	190912348	190915752	190912348	190915752	-	transcript6047.chr2.nnic@NA	transcript6047.chr2.nnic	NA	190912348	190915752	Gene ID= novel_gene_chr2_6048 TPM= 30.8 Transcript Type= NA
chr2	190969034	191014250	190969034	191014250	-	ENST00000361099.7@STAT1	ENST00000361099.7	protein_coding	191014018,191013525,191009876,191008963,191007563,191001074,190999626,190998217,190997856,190995061,190991228,190989615,190987039,190986854,190985619,190984310,190983642,190982383,190980620,190979772,190978856,190976840,190975812,190974830,190969034	191014250,191013678,191010004,191009107,191007661,191001163,190999704,190998308,190998007,190995219,190991320,190989674,190987068,190986947,190985660,190984393,190983740,190982518,190980669,190979866,190979001,190977025,190975887,190974932,190970717	Gene ID= ENSG00000115415.18 TPM= 16.46 Transcript Type= protein_coding
chr2	190969266	191014221	190969266	191014221	-	transcript6024.chr2.nic@STAT1	transcript6024.chr2.nic	protein_coding	191014018,191009876,191008963,191007563,191001074,190999626,190998217,190997856,190995061,190991228,190989615,190987039,190986854,190985619,190984310,190983642,190982383,190980620,190979772,190978856,190976840,190975812,190974830,190969266	191014221,191010004,191009107,191007661,191001163,190999704,190998308,190998007,190995219,190991320,190989674,190987068,190986947,190985660,190984393,190983740,190982518,190980669,190979866,190979001,190977025,190975887,190974932,190970717	Gene ID= ENSG00000115415.18 TPM= 3.19 Transcript Type= NA
chr2	190975537	191014168	190975537	191014168	-	ENST00000392322.7@STAT1	ENST00000392322.7	protein_coding	191014018,191013525,191009876,191008963,191007563,191001074,190999626,190998217,190997856,190995061,190991228,190989615,190987039,190986854,190985619,190984310,190983642,190982383,190980620,190979772,190978856,190976840,190975537	191014168,191013678,191010004,191009107,191007661,191001163,190999704,190998308,190998007,190995219,190991320,190989674,190987068,190986947,190985660,190984393,190983740,190982518,190980669,190979866,190979001,190977025,190975887	Gene ID= ENSG00000115415.18 TPM= 5.84 Transcript Type= protein_coding
chr2	191029580	191151260	191029580	191151260	-	ENST00000392320.6@STAT4	ENST00000392320.6	protein_coding	191150947,191148076,191146613,191076227,191073098,191069693,191066430,191064807,191062762,191061729,191058710,191058202,191058018,191054490,191041065,191039199,191036164,191034548,191033911,191033490,191032958,191031450,191030972,191029580	191151260,191148204,191146757,191076325,191073190,191069771,191066515,191064958,191062920,191061821,191058769,191058219,191058111,191054534,191041148,191039297,191036299,191034597,191034005,191033626,191033149,191031516,191031080,191029866	Gene ID= ENSG00000138378.17 TPM= 55.05 Transcript Type= protein_coding
chr2	191029576	191151590	191029576	191151590	-	ENST00000358470.8@STAT4	ENST00000358470.8	protein_coding	191151334,191148076,191146613,191076227,191073098,191069693,191066430,191064807,191062762,191061729,191058710,191058202,191058018,191054490,191041065,191039199,191036164,191034548,191033911,191033490,191032958,191031450,191030972,191029576	191151590,191148204,191146757,191076325,191073190,191069771,191066515,191064958,191062920,191061821,191058769,191058219,191058111,191054534,191041148,191039297,191036299,191034597,191034005,191033626,191033149,191031516,191031080,191029866	Gene ID= ENSG00000138378.17 TPM= 7.25 Transcript Type= protein_coding
chr2	191029576	191150994	191029576	191150994	-	transcript6059.chr2.nnic@STAT4	transcript6059.chr2.nnic	protein_coding	191150947,191148076,191146613,191076227,191073098,191069693,191066430,191064807,191062762,191061729,191058710,191058202,191058018,191041065,191039199,191036164,191034548,191033911,191033490,191032958,191031450,191030972,191029576	191150994,191148204,191146757,191076325,191073190,191069771,191066515,191064958,191062920,191061821,191058769,191058219,191058111,191041148,191039297,191036299,191034597,191034005,191033626,191033149,191031516,191031080,191029866	Gene ID= ENSG00000138378.17 TPM= 3.54 Transcript Type= NA
chr2	191245167	191425161	191245167	191425161	+	transcript6071.chr2.nic@MYO1B	transcript6071.chr2.nic	protein_coding	191245167,191276887,191296111,191329935,191341461,191346236,191350162,191360631,191362268,191363728,191364158,191369542,191370227,191381462,191383280,191385884,191387224,191390292,191392108,191393073,191396429,191400382,191402632,191408115,191409044,191411066,191414048,191414517,191416115,191423837	191245626,191277030,191296226,191330029,191341565,191346282,191350225,191360729,191362371,191363875,191364276,191369628,191370292,191381566,191383342,191386084,191387450,191390492,191392201,191393222,191396497,191400468,191402718,191408189,191409178,191411172,191414180,191414669,191416242,191425161	Gene ID= ENSG00000128641.18 TPM= 5.31 Transcript Type= NA
chr2	191260256	191262401	191260256	191262401	-	transcript6076.chr2.nnic@NA	transcript6076.chr2.nnic	NA	191260256	191262401	Gene ID= novel_gene_chr2_6077 TPM= 6.37 Transcript Type= NA
chr2	191300641	191302082	191300641	191302082	-	transcript6078.chr2.nnic@NA	transcript6078.chr2.nnic	NA	191300641	191302082	Gene ID= novel_gene_chr2_6079 TPM= 2.12 Transcript Type= NA
chr2	191366385	191369551	191366385	191369551	-	transcript6080.chr2.nnic@NA	transcript6080.chr2.nnic	NA	191366385	191369551	Gene ID= novel_gene_chr2_6081 TPM= 3.19 Transcript Type= NA
chr2	191834302	191847255	191834302	191847255	-	ENST00000304141.4@CAVIN2	ENST00000304141.4	protein_coding	191846443,191834302	191847255,191836717	Gene ID= ENSG00000168497.4 TPM= 311.21 Transcript Type= protein_coding
chr2	192051232	192053260	192051232	192053260	-	transcript6091.chr2.nnic@NA	transcript6091.chr2.nnic	NA	192051232	192053260	Gene ID= novel_gene_chr2_6092 TPM= 3.19 Transcript Type= NA
chr2	195657128	195737702	195657128	195737702	+	ENST00000359634.9@SLC39A10	ENST00000359634.9	protein_coding	195657128,195680032,195683699,195706616,195708656,195713433,195716637,195718252,195728159,195734883	195657281,195681050,195683906,195706785,195708844,195713553,195717005,195718332,195728349,195737702	Gene ID= ENSG00000196950.13 TPM= 4.25 Transcript Type= protein_coding
chr2	196581142	196586761	196581142	196586761	+	transcript6102.chr2.nnic@NA	transcript6102.chr2.nnic	NA	196581142	196586761	Gene ID= novel_gene_chr2_6103 TPM= 3.19 Transcript Type= NA
chr2	197197991	197199273	197197991	197199273	+	ENST00000449346.1@AC013264.1	ENST00000449346.1	antisense_RNA	197197991,197198918	197198089,197199273	Gene ID= ENSG00000231621.1 TPM= 1.06 Transcript Type= antisense_RNA
chr2	197391980	197435077	197391980	197435077	-	transcript6120.chr2.nic@SF3B1	transcript6120.chr2.nic	protein_coding	197434972,197423808,197421029,197420428,197418896,197418509,197416741,197409770,197408369,197407998,197405275,197405076,197403585,197402949,197402556,197401985,197401742,197401400,197400715,197400252,197400055,197398461,197397985,197396056,197392972,197391980	197435077,197423974,197421133,197420542,197418951,197418588,197416911,197410007,197408581,197408119,197405472,197405177,197403764,197403035,197402826,197402130,197401888,197401525,197400936,197400434,197400166,197398581,197398116,197396328,197393188,197392461	Gene ID= ENSG00000115524.15 TPM= 5.13 Transcript Type= NA
chr2	197389784	197435091	197389784	197435091	-	ENST00000335508.10@SF3B1	ENST00000335508.10	protein_coding	197434972,197423808,197421029,197420428,197418509,197416741,197409770,197408369,197407998,197405275,197405076,197403585,197402949,197402556,197401985,197401742,197401400,197400715,197400252,197400055,197398461,197397985,197396056,197392972,197389784	197435091,197423974,197421133,197420542,197418588,197416911,197410007,197408581,197408119,197405472,197405177,197403764,197403035,197402826,197402130,197401888,197401525,197400936,197400434,197400166,197398581,197398116,197396328,197393188,197392461	Gene ID= ENSG00000115524.15 TPM= 90.1 Transcript Type= protein_coding
chr2	197453423	197475308	197453423	197475308	+	ENST00000263960.6@COQ10B	ENST00000263960.6	protein_coding	197453423,197459932,197462539,197470070,197473757	197453664,197460081,197462731,197470171,197475308	Gene ID= ENSG00000115520.8 TPM= 137.02 Transcript Type= protein_coding
chr2	197486581	197500047	197486581	197500047	-	ENST00000388968.7@HSPD1	ENST00000388968.7	protein_coding	197499782,197498675,197497140,197495294,197494657,197494157,197493324,197490197,197489002,197488317,197487858,197486581	197500047,197498850,197497392,197495376,197494752,197494250,197493492,197490296,197489247,197488491,197488036,197487198	Gene ID= ENSG00000144381.16 TPM= 253.24 Transcript Type= protein_coding
chr2	197486586	197500274	197486586	197500274	-	ENST00000345042.6@HSPD1	ENST00000345042.6	protein_coding	197500160,197498675,197497140,197495294,197494657,197494157,197493324,197490197,197489002,197488317,197487858,197486586	197500274,197498850,197497392,197495376,197494752,197494250,197493492,197490296,197489247,197488491,197488036,197487198	Gene ID= ENSG00000144381.16 TPM= 9.47 Transcript Type= protein_coding
chr2	197499994	197503457	197499994	197503457	+	ENST00000233893.9@HSPE1	ENST00000233893.9	protein_coding	197499994,197501074,197503039,197503209	197500439,197501238,197503128,197503457	Gene ID= ENSG00000115541.10 TPM= 67.98 Transcript Type= protein_coding
chr2	197515832	197553699	197515832	197553699	+	ENST00000323303.8@MOB4	ENST00000323303.8	protein_coding	197515832,197523624,197535530,197540111,197540351,197548336,197550275,197550515	197516146,197523686,197535630,197540153,197540437,197548415,197550386,197553699	Gene ID= ENSG00000115540.14 TPM= 27.62 Transcript Type= protein_coding
chr2	197516047	197551012	197516047	197551012	+	ENST00000448447.6@MOB4	ENST00000448447.6	protein_coding	197516047,197535530,197540111,197540351,197548336,197550275,197550515	197516146,197535630,197540153,197540437,197548415,197550386,197551012	Gene ID= ENSG00000115540.14 TPM= 2.12 Transcript Type= protein_coding
chr2	197568224	197675995	197568224	197675995	-	ENST00000295049.8@RFTN2	ENST00000295049.8	protein_coding	197675320,197646483,197644158,197633718,197631011,197617800,197615876,197595991,197568224	197675995,197646666,197644272,197633997,197631220,197617921,197615979,197596069,197572280	Gene ID= ENSG00000162944.10 TPM= 9.56 Transcript Type= protein_coding
chr2	197705369	197708387	197705369	197708387	+	ENST00000282276.7@MARS2	ENST00000282276.7	protein_coding	197705369	197708387	Gene ID= ENSG00000247626.4 TPM= 20.18 Transcript Type= protein_coding
chr2	197899641	197903330	197899641	197903330	-	transcript6189.chr2.nnic@NA	transcript6189.chr2.nnic	NA	197899641	197903330	Gene ID= novel_gene_chr2_6190 TPM= 6.37 Transcript Type= NA
chr2	197910373	197911340	197910373	197911340	+	transcript6187.chr2.nnic@NA	transcript6187.chr2.nnic	NA	197910373	197911340	Gene ID= novel_gene_chr2_6188 TPM= 2.12 Transcript Type= NA
chr2	197955788	197955973	197955788	197955973	-	transcript6195.chr2.nnic@NA	transcript6195.chr2.nnic	NA	197955788	197955973	Gene ID= novel_gene_chr2_6196 TPM= 2.12 Transcript Type= NA
chr2	197966847	197970031	197966847	197970031	-	transcript6193.chr2.nnic@NA	transcript6193.chr2.nnic	NA	197966847	197970031	Gene ID= novel_gene_chr2_6194 TPM= 23.37 Transcript Type= NA
chr2	198031661	198034180	198031661	198034180	-	transcript6191.chr2.nnic@NA	transcript6191.chr2.nnic	NA	198031661	198034180	Gene ID= novel_gene_chr2_6192 TPM= 7.44 Transcript Type= NA
chr2	198083756	198085111	198083756	198085111	+	transcript6185.chr2.nnic@NA	transcript6185.chr2.nnic	NA	198083756	198085111	Gene ID= novel_gene_chr2_6186 TPM= 3.19 Transcript Type= NA
chr2	199760544	199851207	199760544	199851207	-	transcript6200.chr2.nic@FTCDNL1	transcript6200.chr2.nic	protein_coding	199850759,199848848,199846075,199760544	199851207,199848969,199846170,199760835	Gene ID= ENSG00000226124.6 TPM= 2.12 Transcript Type= NA
chr2	199760544	199851173	199760544	199851173	-	ENST00000416668.5@FTCDNL1	ENST00000416668.5	protein_coding	199850740,199848848,199846075,199760544	199851173,199848969,199846170,199760835	Gene ID= ENSG00000226124.6 TPM= 2.12 Transcript Type= protein_coding
chr2	199911256	199928273	199911256	199928273	+	ENST00000319974.5@C2orf69	ENST00000319974.5	protein_coding	199911256,199925062	199911771,199928273	Gene ID= ENSG00000178074.5 TPM= 30.8 Transcript Type= protein_coding
chr2	199929975	199955736	199929975	199955736	-	ENST00000483328.5@TYW5	ENST00000483328.5	protein_coding	199955393,199948337,199943765,199940089,199938933,199936405,199935931,199929975	199955736,199948472,199943834,199940133,199939070,199936492,199936047,199933323	Gene ID= ENSG00000162971.10 TPM= 1.06 Transcript Type= nonsense_mediated_decay
chr2	199929975	199955736	199929975	199955736	-	ENST00000354611.8@TYW5	ENST00000354611.8	protein_coding	199955393,199948318,199943765,199940089,199938933,199936405,199935931,199929975	199955736,199948472,199943834,199940133,199939070,199936492,199936047,199933323	Gene ID= ENSG00000162971.10 TPM= 2.12 Transcript Type= protein_coding
chr2	199955317	199964108	199955317	199964108	+	ENST00000295079.6@MAIP1	ENST00000295079.6	protein_coding	199955317,199955497,199959268,199959754,199961781,199963733	199955336,199956248,199959339,199959880,199961928,199964108	Gene ID= ENSG00000162972.10 TPM= 25.49 Transcript Type= protein_coding
chr2	199955790	199964114	199955790	199964114	+	transcript6214.chr2.nic@MAIP1	transcript6214.chr2.nic	protein_coding	199955790,199959268,199959754,199963733	199956248,199959339,199959880,199964114	Gene ID= ENSG00000162972.10 TPM= 5.31 Transcript Type= NA
chr2	200305986	200482263	200305986	200482263	+	ENST00000358677.9@SPATS2L	ENST00000358677.9	protein_coding	200305986,200329431,200389223,200412311,200416379,200419250,200439122,200440649,200459769,200467290,200469914,200472832,200477636	200306160,200329480,200389283,200412419,200416428,200419496,200439328,200440784,200459827,200467399,200470016,200473052,200482263	Gene ID= ENSG00000196141.13 TPM= 17.3 Transcript Type= protein_coding
chr2	200306151	200478529	200306151	200478529	+	ENST00000409988.7@SPATS2L	ENST00000409988.7	protein_coding	200306151,200329431,200389223,200412311,200416379,200419250,200439122,200440649,200459769,200467290,200469914,200472832,200477636	200306601,200329480,200389283,200412419,200416428,200419496,200439328,200440784,200459827,200467399,200470016,200473052,200478529	Gene ID= ENSG00000196141.13 TPM= 15.97 Transcript Type= protein_coding
chr2	200306616	200478530	200306616	200478530	+	transcript6240.chr2.nic@SPATS2L	transcript6240.chr2.nic	protein_coding	200306616,200329431,200389223,200412311,200416379,200419250,200440649,200459769,200467290,200469914,200472832,200477636	200306922,200329480,200389283,200412419,200416428,200419496,200440784,200459827,200467399,200470016,200473052,200478530	Gene ID= ENSG00000196141.13 TPM= 118.7 Transcript Type= NA
chr2	200305893	200478530	200305893	200478530	+	ENST00000409718.5@SPATS2L	ENST00000409718.5	protein_coding	200305893,200329431,200389223,200412311,200416379,200419250,200439122,200440649,200459769,200467290,200469914,200472832,200477636	200306292,200329480,200389283,200412419,200416428,200419496,200439328,200440784,200459827,200467399,200470016,200473052,200478530	Gene ID= ENSG00000196141.13 TPM= 2.17 Transcript Type= protein_coding
chr2	200306524	200478530	200306524	200478530	+	ENST00000360760.9@SPATS2L	ENST00000360760.9	protein_coding	200306524,200329431,200389223,200412311,200416379,200419250,200440649,200459769,200467290,200469914,200472832,200477636	200306601,200329480,200389283,200412419,200416428,200419496,200440784,200459827,200467399,200470016,200473052,200478530	Gene ID= ENSG00000196141.13 TPM= 24.16 Transcript Type= protein_coding
chr2	200306708	200478530	200306708	200478530	+	ENST00000409140.7@SPATS2L	ENST00000409140.7	protein_coding	200306708,200329431,200389223,200412311,200416379,200419250,200439122,200440649,200459769,200467290,200469914,200472832,200477636	200306922,200329480,200389283,200412419,200416428,200419496,200439328,200440784,200459827,200467399,200470016,200473052,200478530	Gene ID= ENSG00000196141.13 TPM= 91.39 Transcript Type= protein_coding
chr2	200306718	200390868	200306718	200390868	+	ENST00000459656.5@SPATS2L	ENST00000459656.5	protein_coding	200306718,200329431,200389223	200306922,200329480,200390868	Gene ID= ENSG00000196141.13 TPM= 2.12 Transcript Type= retained_intron
chr2	200419712	200421061	200419712	200421061	-	transcript6261.chr2.nnic@NA	transcript6261.chr2.nnic	NA	200419712	200421061	Gene ID= novel_gene_chr2_6262 TPM= 4.25 Transcript Type= NA
chr2	200488952	200510063	200488952	200510063	-	ENST00000359878.7@KCTD18	ENST00000359878.7	protein_coding	200509628,200506857,200504748,200498891,200497753,200493172,200488952	200510063,200507091,200504959,200499084,200497847,200493274,200490616	Gene ID= ENSG00000155729.12 TPM= 8.5 Transcript Type= protein_coding
chr2	200488958	200510068	200488958	200510068	-	ENST00000409157.5@KCTD18	ENST00000409157.5	protein_coding	200510011,200506857,200504748,200498891,200497753,200493172,200488958	200510068,200507091,200504959,200499084,200497847,200493274,200490616	Gene ID= ENSG00000155729.12 TPM= 15.93 Transcript Type= protein_coding
chr2	200811547	200823834	200811547	200823834	+	transcript6270.chr2.nic@BZW1	transcript6270.chr2.nic	protein_coding	200811547,200813208,200815341,200815667,200816325,200817106,200817974,200818223,200818755,200819982,200821183,200822147	200811727,200813281,200815517,200815761,200816390,200817241,200818083,200818393,200818901,200820120,200821305,200823834	Gene ID= ENSG00000082153.17 TPM= 9.38 Transcript Type= NA
chr2	200811546	200827338	200811546	200827338	+	ENST00000409600.5@BZW1	ENST00000409600.5	protein_coding	200811546,200813208,200815341,200815667,200816325,200817106,200817974,200818223,200818755,200819982,200821183,200822147	200811990,200813281,200815517,200815761,200816390,200817241,200818083,200818393,200818901,200820120,200821305,200827338	Gene ID= ENSG00000082153.17 TPM= 9.38 Transcript Type= protein_coding
chr2	200853009	200864744	200853009	200864744	-	ENST00000621181.4@CLK1	ENST00000621181.4	protein_coding	200864564,200861702,200861238,200859680,200857973,200857718,200856891,200856682,200855004,200854616,200853903,200853009	200864744,200861862,200861466,200859747,200858089,200857884,200856985,200856811,200855086,200854695,200853993,200853449	Gene ID= ENSG00000013441.15 TPM= 2.12 Transcript Type= protein_coding
chr2	200853081	200864685	200853081	200864685	-	transcript6287.chr2.nic@CLK1	transcript6287.chr2.nic	protein_coding	200864564,200861702,200859680,200857973,200857718,200856891,200856682,200854616,200853903,200853081	200864685,200861862,200861466,200858089,200857884,200856985,200856811,200855086,200853993,200853449	Gene ID= ENSG00000013441.15 TPM= 2.12 Transcript Type= NA
chr2	200853081	200864691	200853081	200864691	-	ENST00000473565.5@CLK1	ENST00000473565.5	protein_coding	200864564,200861702,200859680,200857973,200857718,200856891,200856682,200855004,200854616,200853903,200853081	200864691,200861862,200861466,200858089,200857884,200856985,200856811,200855086,200854695,200853993,200853449	Gene ID= ENSG00000013441.15 TPM= 11.68 Transcript Type= retained_intron
chr2	200871009	200889326	200871009	200889326	-	transcript6292.chr2.nic@PPIL3	transcript6292.chr2.nic	protein_coding	200889244,200887613,200885698,200882342,200881421,200876919,200871009	200889326,200887685,200885772,200882435,200881488,200877037,200871521	Gene ID= ENSG00000240344.8 TPM= 6.37 Transcript Type= NA
chr2	200889348	200903925	200889348	200903925	+	transcript6295.chr2.nnic@NIF3L1	transcript6295.chr2.nnic	protein_coding	200889348,200891918,200893246,200895264,200897076,200899385,200903494	200889391,200892379,200893408,200895390,200897214,200899468,200903925	Gene ID= ENSG00000196290.14 TPM= 9.82 Transcript Type= NA
chr2	200889357	200903925	200889357	200903925	+	transcript6296.chr2.nic@NIF3L1	transcript6296.chr2.nic	protein_coding	200889357,200891969,200893246,200895264,200897076,200899385,200903494	200889391,200892379,200893408,200895390,200897214,200899468,200903925	Gene ID= ENSG00000196290.14 TPM= 3.45 Transcript Type= NA
chr2	200889385	200903930	200889385	200903930	+	ENST00000409020.5@NIF3L1	ENST00000409020.5	protein_coding	200889385,200891918,200893246,200895264,200897076,200899385,200903494	200889652,200892379,200893408,200895390,200897214,200899468,200903930	Gene ID= ENSG00000196290.14 TPM= 4.51 Transcript Type= protein_coding
chr2	200891917	200903925	200891917	200903925	+	ENST00000409588.1@NIF3L1	ENST00000409588.1	protein_coding	200891917,200893246,200895264,200899385,200903494	200892379,200893408,200895390,200899468,200903925	Gene ID= ENSG00000196290.14 TPM= 1.33 Transcript Type= protein_coding
chr2	200910880	200963649	200910880	200963649	-	transcript6307.chr2.nic@ORC2	transcript6307.chr2.nic	protein_coding	200963490,200959392,200958030,200957401,200949554,200942685,200941248,200937906,200935699,200933876,200931339,200926768,200925836,200920993,200920222,200913295,200910880	200963649,200959440,200958133,200957544,200949643,200942777,200941279,200937966,200935892,200933974,200931448,200926900,200925932,200921139,200920393,200913992,200911387	Gene ID= ENSG00000115942.8 TPM= 2.12 Transcript Type= NA
chr2	201072030	201085750	201072030	201085750	+	ENST00000454214.1@NDUFB3	ENST00000454214.1	protein_coding	201072030,201072279,201078881,201085459	201072059,201072361,201079022,201085750	Gene ID= ENSG00000119013.8 TPM= 9.56 Transcript Type= protein_coding
chr2	201071739	201085750	201071739	201085750	+	ENST00000237889.8@NDUFB3	ENST00000237889.8	protein_coding	201071739,201078881,201085459	201072059,201079022,201085750	Gene ID= ENSG00000119013.8 TPM= 230.49 Transcript Type= protein_coding
chr2	201115958	201167542	201115958	201167542	+	transcript6341.chr2.nnic@CFLAR	transcript6341.chr2.nnic	protein_coding	201115958,201129729,201133029,201135972,201140357,201145378,201149003,201149754,201160432,201162996,201167154	201116481,201130146,201133134,201136107,201140439,201145432,201149052,201149835,201160942,201164084,201167542	Gene ID= ENSG00000003402.19 TPM= 6.05 Transcript Type= NA
chr2	201117751	201141598	201117751	201141598	+	transcript6371.chr2.nic@CFLAR	transcript6371.chr2.nic	protein_coding	201117751,201129729,201133029,201135972,201140357,201141374	201118901,201130146,201133134,201136107,201140439,201141598	Gene ID= ENSG00000003402.19 TPM= 14.52 Transcript Type= NA
chr2	201116301	201141598	201116301	201141598	+	transcript6374.chr2.nic@CFLAR	transcript6374.chr2.nic	protein_coding	201116301,201133029,201135972,201140357,201141374	201116481,201133134,201136107,201140439,201141598	Gene ID= ENSG00000003402.19 TPM= 4.96 Transcript Type= NA
chr2	201117751	201139877	201117751	201139877	+	transcript6376.chr2.nic@CFLAR	transcript6376.chr2.nic	protein_coding	201117751,201129729,201133029,201135972,201136198	201118901,201130146,201133134,201136107,201139877	Gene ID= ENSG00000003402.19 TPM= 7.44 Transcript Type= NA
chr2	201118523	201119177	201118523	201119177	+	ENST00000490965.1@CFLAR	ENST00000490965.1	protein_coding	201118523,201119028	201118901,201119177	Gene ID= ENSG00000003402.19 TPM= 1.06 Transcript Type= processed_transcript
chr2	201116167	201141598	201116167	201141598	+	ENST00000341222.10@CFLAR	ENST00000341222.10	protein_coding	201116167,201129729,201133029,201135972,201140357,201141374	201116481,201130146,201133134,201136107,201140439,201141598	Gene ID= ENSG00000003402.19 TPM= 38.1 Transcript Type= protein_coding
chr2	201116164	201119177	201116164	201119177	+	transcript6384.chr2.nnic@NA	transcript6384.chr2.nnic	NA	201116164	201119177	Gene ID= novel_gene_chr2_6385 TPM= 20.18 Transcript Type= NA
chr2	201120025	201122989	201120025	201122989	-	transcript6392.chr2.nnic@NA	transcript6392.chr2.nnic	NA	201120025	201122989	Gene ID= novel_gene_chr2_6393 TPM= 12.75 Transcript Type= NA
chr2	201141904	201141966	201141904	201141966	+	ENST00000459460.1@RNU7-45P	ENST00000459460.1	snRNA	201141904	201141966	Gene ID= ENSG00000238829.1 TPM= 1.06 Transcript Type= snRNA
chr2	201153905	201156676	201153905	201156676	-	transcript6394.chr2.nnic@NA	transcript6394.chr2.nnic	NA	201153905	201156676	Gene ID= novel_gene_chr2_6395 TPM= 22.31 Transcript Type= NA
chr2	201165892	201168272	201165892	201168272	+	transcript6386.chr2.nnic@NA	transcript6386.chr2.nnic	NA	201165892	201168272	Gene ID= novel_gene_chr2_6387 TPM= 5.31 Transcript Type= NA
chr2	201171164	201172663	201171164	201172663	+	transcript6388.chr2.nnic@NA	transcript6388.chr2.nnic	NA	201171164	201172663	Gene ID= novel_gene_chr2_6389 TPM= 3.19 Transcript Type= NA
chr2	201258036	201287709	201258036	201287709	+	transcript6396.chr2.nic@CASP8	transcript6396.chr2.nic	protein_coding	201258036,201266461,201271516,201272638,201272898,201274889,201276827,201284816,201286459	201258154,201266791,201271621,201272776,201272942,201274953,201276968,201285317,201287709	Gene ID= ENSG00000064012.21 TPM= 2.12 Transcript Type= NA
chr2	201260500	201287709	201260500	201287709	+	ENST00000323492.11@CASP8	ENST00000323492.11	protein_coding	201260500,201266461,201271516,201272638,201274889,201276827,201284816,201286459	201260613,201266791,201271621,201272776,201274953,201276968,201285317,201287709	Gene ID= ENSG00000064012.21 TPM= 1.06 Transcript Type= protein_coding
chr2	201322172	201323801	201322172	201323801	+	transcript6403.chr2.nnic@NA	transcript6403.chr2.nnic	NA	201322172	201323801	Gene ID= novel_gene_chr2_6404 TPM= 2.12 Transcript Type= NA
chr2	201379815	201451549	201379815	201451549	-	transcript6406.chr2.nnic@TRAK2	transcript6406.chr2.nnic	protein_coding	201451350,201420417,201407403,201401018,201399377,201398145,201397502,201395314,201394798,201392909,201389801,201389300,201387703,201386218,201384111,201381124,201379815	201451549,201420706,201407597,201401094,201399493,201398354,201397580,201395444,201394872,201393046,201389880,201389503,201388001,201386484,201384216,201381218,201380865	Gene ID= ENSG00000115993.12 TPM= 4.25 Transcript Type= NA
chr2	201379815	201451373	201379815	201451373	-	transcript6408.chr2.nnic@TRAK2	transcript6408.chr2.nnic	protein_coding	201451037,201420417,201407403,201401018,201399377,201398145,201397502,201395314,201394798,201392909,201389801,201389300,201387703,201386218,201384111,201379815	201451373,201420706,201407597,201401094,201399493,201398354,201397580,201395444,201394872,201393046,201389880,201389503,201388001,201386484,201384216,201381218	Gene ID= ENSG00000115993.12 TPM= 9.56 Transcript Type= NA
chr2	201379815	201451624	201379815	201451624	-	transcript6411.chr2.nnic@TRAK2	transcript6411.chr2.nnic	protein_coding	201451350,201420417,201407403,201399377,201398145,201397502,201395314,201394798,201392909,201389801,201389300,201387703,201386218,201384111,201379815	201451624,201420706,201407597,201399493,201398354,201397580,201395444,201394872,201393046,201389880,201389503,201388001,201386484,201384216,201381218	Gene ID= ENSG00000115993.12 TPM= 9.56 Transcript Type= NA
chr2	201377207	201451579	201377207	201451579	-	ENST00000332624.7@TRAK2	ENST00000332624.7	protein_coding	201451350,201420417,201407403,201401018,201399377,201398145,201397502,201395314,201394798,201392909,201389801,201389300,201387703,201386218,201384111,201377207	201451579,201420706,201407597,201401094,201399493,201398354,201397580,201395444,201394872,201393046,201389880,201389503,201388001,201386484,201384216,201381218	Gene ID= ENSG00000115993.12 TPM= 88.16 Transcript Type= protein_coding
chr2	201400153	201403758	201400153	201403758	+	transcript6418.chr2.nnic@NA	transcript6418.chr2.nnic	NA	201400153	201403758	Gene ID= novel_gene_chr2_6419 TPM= 4.25 Transcript Type= NA
chr2	201451669	201480846	201451669	201480846	+	ENST00000194530.7@STRADB	ENST00000194530.7	protein_coding	201451669,201454746,201458784,201469953,201472955,201474647,201475619,201477619,201478087,201478357,201479489,201480032	201451938,201454852,201458864,201470052,201473076,201474755,201475742,201477790,201478191,201478601,201479531,201480846	Gene ID= ENSG00000082146.12 TPM= 57.01 Transcript Type= protein_coding
chr2	201451684	201480846	201451684	201480846	+	transcript6427.chr2.nic@STRADB	transcript6427.chr2.nic	protein_coding	201451684,201454746,201458784,201469953,201472955,201474647,201475619,201477619,201478087,201478563,201479489,201480032	201451938,201454852,201458864,201470052,201473076,201474755,201475742,201477790,201478191,201478601,201479531,201480846	Gene ID= ENSG00000082146.12 TPM= 5.31 Transcript Type= NA
chr2	201451684	201480846	201451684	201480846	+	transcript6430.chr2.nic@STRADB	transcript6430.chr2.nic	protein_coding	201451684,201454746,201458784,201472955,201474647,201475619,201477619,201478087,201478357,201479489,201480032	201451938,201454852,201458864,201473076,201474755,201475742,201477790,201478191,201478601,201479531,201480846	Gene ID= ENSG00000082146.12 TPM= 2.84 Transcript Type= NA
chr2	201451684	201480846	201451684	201480846	+	transcript6432.chr2.nnic@STRADB	transcript6432.chr2.nnic	protein_coding	201451684,201454746,201472955,201474647,201475619,201477619,201478087,201478357,201479489,201480032	201451938,201454852,201473076,201474755,201475742,201477790,201478191,201478601,201479531,201480846	Gene ID= ENSG00000082146.12 TPM= 2.84 Transcript Type= NA
chr2	201620184	201642944	201620184	201642944	-	ENST00000409444.6@TMEM237	ENST00000409444.6	protein_coding	201642609,201640893,201640261,201638989,201636748,201633311,201632051,201629729,201629230,201628076,201627321,201626026,201620184	201642944,201640924,201640265,201639045,201636885,201633431,201632208,201629852,201629421,201628149,201627414,201626147,201624322	Gene ID= ENSG00000155755.18 TPM= 2.12 Transcript Type= protein_coding
chr2	201620184	201643517	201620184	201643517	-	ENST00000409883.6@TMEM237	ENST00000409883.6	protein_coding	201643359,201640893,201640261,201638989,201636748,201633311,201632051,201629729,201629230,201628076,201627321,201626026,201620184	201643517,201640924,201640265,201639045,201636885,201633431,201632208,201629852,201629421,201628149,201627414,201626147,201624322	Gene ID= ENSG00000155755.18 TPM= 2.12 Transcript Type= protein_coding
chr2	201623756	201643484	201623756	201643484	-	ENST00000286196.9@TMEM237	ENST00000286196.9	protein_coding	201643359,201640893,201638989,201636748,201633311,201632051,201629729,201629230,201628076,201627321,201626026,201623756	201643484,201640924,201639045,201636885,201633431,201632208,201629852,201629421,201628149,201627414,201626147,201624322	Gene ID= ENSG00000155755.18 TPM= 4.25 Transcript Type= nonsense_mediated_decay
chr2	201700554	201781189	201700554	201781189	-	ENST00000264276.10@ALS2	ENST00000264276.10	protein_coding	201780877,201768866,201767229,201760881,201757402,201754503,201753146,201749712,201746566,201744258,201741674,201738670,201733276,201729052,201728512,201727705,201727212,201726664,201726484,201725356,201724295,201723330,201723043,201718077,201715672,201710991,201709881,201707869,201706846,201705416,201705139,201704454,201704122,201700554	201781189,201768945,201767383,201761818,201757759,201754671,201753242,201749789,201746748,201744429,201741854,201738735,201733438,201729183,201728640,201727775,201727278,201726866,201726549,201725454,201724459,201723441,201723120,201718210,201715839,201711108,201710038,201707991,201707022,201705461,201705200,201704603,201704218,201701889	Gene ID= ENSG00000003393.14 TPM= 10.62 Transcript Type= protein_coding
chr2	201741184	201780956	201741184	201780956	-	ENST00000482789.5@ALS2	ENST00000482789.5	protein_coding	201780877,201768866,201767229,201760881,201757402,201754503,201753146,201749712,201746566,201744258,201741184	201780956,201768945,201767383,201761818,201757759,201754671,201753242,201749789,201746748,201744429,201741854	Gene ID= ENSG00000003393.14 TPM= 3.19 Transcript Type= retained_intron
chr2	201759457	201780956	201759457	201780956	-	ENST00000467448.5@ALS2	ENST00000467448.5	protein_coding	201780877,201768866,201767229,201759457	201780956,201768945,201767383,201761818	Gene ID= ENSG00000003393.14 TPM= 13.81 Transcript Type= protein_coding
chr2	202034587	202038445	202034587	202038445	+	ENST00000286201.2@FZD7	ENST00000286201.2	protein_coding	202034587	202038445	Gene ID= ENSG00000155760.2 TPM= 90.28 Transcript Type= protein_coding
chr2	202206180	202238608	202206180	202238608	-	ENST00000392246.6@SUMO1	ENST00000392246.6	protein_coding	202238440,202220032,202214357,202210735,202206180	202238608,202220106,202214434,202210806,202207321	Gene ID= ENSG00000116030.16 TPM= 13.81 Transcript Type= protein_coding
chr2	202265716	202303666	202265716	202303666	+	ENST00000264279.9@NOP58	ENST00000264279.9	protein_coding	202265716,202275113,202277950,202282351,202284345,202287660,202290323,202291125,202292777,202295674,202297379,202297845,202300234,202302921,202303386	202265986,202275189,202278002,202282472,202284481,202287724,202290457,202291270,202292903,202295837,202297513,202297906,202300367,202303057,202303666	Gene ID= ENSG00000055044.10 TPM= 11.68 Transcript Type= protein_coding
chr2	202374933	202376192	202374933	202376192	-	transcript6493.chr2.nnic@NA	transcript6493.chr2.nnic	NA	202374933	202376192	Gene ID= novel_gene_chr2_6494 TPM= 2.12 Transcript Type= NA
chr2	202464808	202560341	202464808	202560341	+	ENST00000638587.1@BMPR2	ENST00000638587.1	protein_coding	202464808,202467053,202467519,202513719,202514888,202518822,202520087,202530794,202532585,202542311,202552716,202555252,202559696	202464983,202467054,202467689,202513829,202514979,202519052,202520201,202530954,202532732,202542447,202552888,202556531,202560341	Gene ID= ENSG00000204217.13 TPM= 8.5 Transcript Type= protein_coding
chr2	202376327	202521577	202376327	202521577	+	transcript6480.chr2.nic@BMPR2	transcript6480.chr2.nic	protein_coding	202376327,202464809,202467519,202513719,202514888,202518822,202520087	202377550,202464979,202467689,202513829,202514979,202519052,202521577	Gene ID= ENSG00000204217.13 TPM= 5.31 Transcript Type= NA
chr2	202416978	202420191	202416978	202420191	+	transcript6491.chr2.nnic@NA	transcript6491.chr2.nnic	NA	202416978	202420191	Gene ID= novel_gene_chr2_6492 TPM= 4.25 Transcript Type= NA
chr2	202777899	202871655	202777899	202871655	-	transcript6495.chr2.nic@ICA1L	transcript6495.chr2.nic	protein_coding	202871619,202870530,202869536,202828848,202825695,202821358,202819701,202817418,202815911,202814702,202811746,202796890,202788830,202785918,202777899	202871655,202870656,202869605,202829016,202825767,202821481,202819899,202817543,202816009,202814784,202811789,202796964,202789087,202786007,202779648	Gene ID= ENSG00000163596.16 TPM= 2.12 Transcript Type= NA
chr2	202777899	202871985	202777899	202871985	-	ENST00000358299.6@ICA1L	ENST00000358299.6	protein_coding	202871619,202828848,202825695,202821358,202819701,202817418,202815911,202814702,202811746,202796890,202788830,202785918,202777899	202871985,202829016,202825767,202821481,202819899,202817543,202816009,202814784,202811789,202796964,202789087,202786007,202779648	Gene ID= ENSG00000163596.16 TPM= 1.06 Transcript Type= protein_coding
chr2	202874782	202912226	202874782	202912226	-	ENST00000261015.4@WDR12	ENST00000261015.4	protein_coding	202911436,202907865,202901025,202899531,202897300,202896065,202894581,202892617,202884395,202884198,202883609,202882711,202874782	202912226,202907959,202901119,202899637,202897415,202896219,202894626,202892702,202884535,202884303,202883741,202882783,202880937	Gene ID= ENSG00000138442.9 TPM= 2.12 Transcript Type= protein_coding
chr2	202912214	202987063	202912214	202987063	+	ENST00000402905.7@CARF	ENST00000402905.7	protein_coding	202912214,202917877,202941860,202942740,202952559,202954005,202955674,202961237,202966978,202969919,202971505,202974334,202977269,202981555,202982072,202983506	202912324,202918043,202941980,202942967,202952679,202954134,202955758,202961426,202967098,202970062,202971738,202974496,202977332,202981685,202982441,202987063	Gene ID= ENSG00000138380.17 TPM= 1.06 Transcript Type= protein_coding
chr2	202912255	202963168	202912255	202963168	+	ENST00000444724.5@CARF	ENST00000444724.5	protein_coding	202912255,202917877,202941860,202942740,202952559,202954005,202955674,202961237	202912324,202918043,202941980,202942967,202952679,202954134,202955758,202963168	Gene ID= ENSG00000138380.17 TPM= 1.06 Transcript Type= protein_coding
chr2	203014879	203219874	203014879	203219874	+	ENST00000449802.5@NBEAL1	ENST00000449802.5	protein_coding	203014879,203016156,203041765,203049814,203056427,203057326,203068393,203077752,203083219,203084463,203099629,203107420,203107608,203110150,203111979,203113015,203115985,203122254,203125352,203125960,203126557,203126824,203127781,203130318,203131973,203133058,203135677,203136599,203138162,203138620,203144600,203145011,203148991,203151465,203157699,203166149,203167227,203169747,203171928,203172729,203175147,203180382,203183279,203188472,203190292,203193795,203197302,203199338,203201543,203202687,203208637,203209161,203210958,203213518,203217253	203014982,203016435,203041856,203049975,203056508,203057453,203068475,203077837,203083525,203084569,203099712,203107518,203108188,203110282,203112098,203113318,203116070,203122343,203125520,203126093,203126716,203126926,203127937,203130476,203132132,203133146,203136252,203136774,203138315,203138748,203144905,203145160,203149148,203151589,203157825,203166297,203167360,203169851,203172023,203172853,203175287,203180512,203183388,203188589,203190389,203193911,203197391,203199447,203201715,203202781,203208753,203209322,203211106,203213653,203219874	Gene ID= ENSG00000144426.18 TPM= 1.06 Transcript Type= protein_coding
chr2	203204326	203207615	203204326	203207615	-	transcript6517.chr2.nnic@NA	transcript6517.chr2.nnic	NA	203204326	203207615	Gene ID= novel_gene_chr2_6518 TPM= 5.31 Transcript Type= NA
chr2	203219792	203225193	203219792	203225193	+	transcript6515.chr2.nnic@NA	transcript6515.chr2.nnic	NA	203219792	203225193	Gene ID= novel_gene_chr2_6516 TPM= 4.25 Transcript Type= NA
chr2	203238215	203239278	203238215	203239278	-	transcript6541.chr2.nnic@NA	transcript6541.chr2.nnic	NA	203238215	203239278	Gene ID= novel_gene_chr2_6542 TPM= 4.25 Transcript Type= NA
chr2	203238940	203297345	203238940	203297345	+	ENST00000356079.8@CYP20A1	ENST00000356079.8	protein_coding	203238940,203245846,203246755,203251967,203266514,203272670,203278573,203280059,203285612,203289765,203292262,203296474,203296758	203239134,203245895,203246921,203252109,203266681,203272748,203278688,203280113,203285732,203289876,203292326,203296563,203297345	Gene ID= ENSG00000119004.15 TPM= 1.06 Transcript Type= protein_coding
chr2	203238982	203297014	203238982	203297014	+	ENST00000461371.5@CYP20A1	ENST00000461371.5	protein_coding	203238982,203251967,203266514,203272670,203278573,203280059,203285612,203289765,203292262,203296474,203296758	203239134,203252109,203266681,203272748,203278688,203280113,203285732,203289876,203292326,203296563,203297014	Gene ID= ENSG00000119004.15 TPM= 1.06 Transcript Type= processed_transcript
chr2	203328263	203429770	203328263	203429770	+	transcript6548.chr2.nic@ABI2	transcript6548.chr2.nic	protein_coding	203328263,203366877,203376057,203380208,203391046,203394700,203395656,203402576,203411285,203416908,203427177	203328631,203367044,203376132,203380384,203391143,203394846,203395780,203402734,203411371,203417081,203429770	Gene ID= ENSG00000138443.15 TPM= 2.92 Transcript Type= NA
chr2	203328239	203432172	203328239	203432172	+	ENST00000261018.11@ABI2	ENST00000261018.11	protein_coding	203328239,203366877,203380208,203382189,203391046,203394700,203395656,203396785,203402576,203416908,203427177	203328631,203367044,203380384,203382206,203391143,203394846,203395780,203396967,203402734,203417081,203432172	Gene ID= ENSG00000138443.15 TPM= 7.44 Transcript Type= protein_coding
chr2	203328263	203427569	203328263	203427569	+	transcript6558.chr2.nic@ABI2	transcript6558.chr2.nic	protein_coding	203328263,203366877,203380208,203382189,203391046,203395656,203402576,203411285,203416908,203427177	203328631,203367044,203380384,203382206,203391143,203395780,203402734,203411371,203417081,203427569	Gene ID= ENSG00000138443.15 TPM= 5.31 Transcript Type= NA
chr2	203328263	203427569	203328263	203427569	+	transcript6563.chr2.nic@ABI2	transcript6563.chr2.nic	protein_coding	203328263,203366877,203380208,203391046,203395656,203396785,203402576,203411285,203416908,203427177	203328631,203367044,203380384,203391143,203395780,203396967,203402734,203411371,203417081,203427569	Gene ID= ENSG00000138443.15 TPM= 2.12 Transcript Type= NA
chr2	203328263	203429770	203328263	203429770	+	transcript6568.chr2.nic@ABI2	transcript6568.chr2.nic	protein_coding	203328263,203366877,203380208,203382189,203391046,203395656,203402576,203416908,203427177	203328631,203367044,203380384,203382206,203391143,203395780,203402734,203417081,203429770	Gene ID= ENSG00000138443.15 TPM= 2.92 Transcript Type= NA
chr2	203328263	203427569	203328263	203427569	+	transcript6569.chr2.nic@ABI2	transcript6569.chr2.nic	protein_coding	203328263,203366877,203380208,203391046,203394700,203395656,203402576,203416908,203427177	203328631,203367044,203380384,203391143,203394846,203395780,203402734,203417081,203427569	Gene ID= ENSG00000138443.15 TPM= 3.19 Transcript Type= NA
chr2	203328263	203429770	203328263	203429770	+	transcript6575.chr2.nic@ABI2	transcript6575.chr2.nic	protein_coding	203328263,203366877,203380208,203391046,203395656,203402576,203411285,203416908,203427177	203328631,203367044,203380384,203391143,203395780,203402734,203411371,203417081,203429770	Gene ID= ENSG00000138443.15 TPM= 9.29 Transcript Type= NA
chr2	203328280	203432173	203328280	203432173	+	ENST00000261017.9@ABI2	ENST00000261017.9	protein_coding	203328280,203366877,203380208,203391046,203394700,203395656,203402576,203411285,203416908,203427177	203328631,203367044,203380384,203391143,203394846,203395780,203402734,203411371,203417081,203432173	Gene ID= ENSG00000138443.15 TPM= 7.44 Transcript Type= protein_coding
chr2	203385141	203385901	203385141	203385901	-	transcript6589.chr2.nnic@NA	transcript6589.chr2.nnic	NA	203385141	203385901	Gene ID= novel_gene_chr2_6590 TPM= 3.19 Transcript Type= NA
chr2	203433816	203437061	203433816	203437061	-	transcript6587.chr2.nnic@NA	transcript6587.chr2.nnic	NA	203433816	203437061	Gene ID= novel_gene_chr2_6588 TPM= 5.31 Transcript Type= NA
chr2	204545404	204688597	204545404	204688597	+	transcript6592.chr2.nic@PARD3B	transcript6592.chr2.nic	protein_coding	204545404,204686181	204546119,204688597	Gene ID= ENSG00000116117.17 TPM= 2.12 Transcript Type= NA
chr2	206056898	206086283	206056898	206086283	-	transcript6595.chr2.nic@INO80D	transcript6595.chr2.nic	protein_coding	206085901,206063151,206062799,206056898	206086283,206063244,206063045,206056943	Gene ID= ENSG00000114933.15 TPM= 5.31 Transcript Type= NA
chr2	206085328	206086851	206085328	206086851	+	transcript6598.chr2.nnic@NA	transcript6598.chr2.nnic	NA	206085328	206086851	Gene ID= novel_gene_chr2_6599 TPM= 9.56 Transcript Type= NA
chr2	206114817	206159603	206114817	206159603	-	ENST00000233190.10@NDUFS1	ENST00000233190.10	protein_coding	206159341,206153618,206152419,206149818,206149020,206147753,206147531,206146903,206144892,206144018,206142686,206141941,206138485,206132945,206130088,206127797,206126710,206126539,206114817	206159603,206153682,206152510,206149925,206149096,206147834,206147661,206147088,206145026,206144132,206142831,206142069,206138614,206133105,206130242,206127972,206126844,206126611,206124276	Gene ID= ENSG00000023228.13 TPM= 117.19 Transcript Type= protein_coding
chr2	206123111	206159194	206123111	206159194	-	ENST00000455934.6@NDUFS1	ENST00000455934.6	protein_coding	206159096,206153618,206152419,206149818,206149020,206147753,206147531,206146903,206144892,206144018,206142686,206141941,206138485,206132945,206130088,206127797,206126710,206126539,206123111	206159194,206153682,206152510,206149925,206149096,206147834,206147661,206147088,206145026,206144132,206142831,206142069,206138614,206133105,206130242,206127972,206126844,206126611,206124276	Gene ID= ENSG00000023228.13 TPM= 1.41 Transcript Type= protein_coding
chr2	206159585	206162928	206159585	206162928	+	ENST00000236957.9@EEF1B2	ENST00000236957.9	protein_coding	206159585,206159959,206160588,206161346,206162038,206162489,206162729	206159684,206160059,206160710,206161472,206162104,206162614,206162928	Gene ID= ENSG00000114942.13 TPM= 59.75 Transcript Type= protein_coding
chr2	206159594	206162927	206159594	206162927	+	ENST00000392221.5@EEF1B2	ENST00000392221.5	protein_coding	206159594,206159913,206160588,206161346,206162038,206162489,206162729	206159684,206160059,206160710,206161472,206162104,206162614,206162927	Gene ID= ENSG00000114942.13 TPM= 32.93 Transcript Type= protein_coding
chr2	206159605	206162928	206159605	206162928	+	ENST00000392222.6@EEF1B2	ENST00000392222.6	protein_coding	206159605,206160588,206161346,206162038,206162489,206162729	206160059,206160710,206161472,206162104,206162614,206162928	Gene ID= ENSG00000114942.13 TPM= 125.6 Transcript Type= protein_coding
chr2	206443450	206617961	206443450	206617961	+	transcript6659.chr2.nic@ADAM23	transcript6659.chr2.nic	protein_coding	206443450,206445307,206481232,206530885,206542052,206543253,206547429,206548281,206550095,206557427,206559955,206561128,206562203,206565020,206567223,206570740,206571727,206573115,206587325,206588091,206589409,206592617,206594737,206596051,206617579	206444080,206445524,206481308,206530948,206542134,206543316,206547501,206548354,206550160,206557498,206560118,206561212,206562293,206565068,206567322,206570811,206571816,206573195,206587375,206588154,206589514,206592736,206594905,206596162,206617961	Gene ID= ENSG00000114948.12 TPM= 26.55 Transcript Type= NA
chr2	206443514	206597997	206443514	206597997	+	transcript6664.chr2.nic@ADAM23	transcript6664.chr2.nic	protein_coding	206443514,206445307,206481232,206530885,206542052,206543253,206547429,206548281,206550095,206557427,206559955,206561128,206562203,206565020,206567223,206570740,206571727,206573115,206587325,206588091,206589409,206592617,206594737,206596051	206444080,206445524,206481308,206530948,206542134,206543316,206547501,206548354,206550160,206557498,206560118,206561212,206562293,206565068,206567322,206570811,206571816,206573195,206587375,206588154,206589514,206592736,206594905,206597997	Gene ID= ENSG00000114948.12 TPM= 7.44 Transcript Type= NA
chr2	206443514	206573637	206443514	206573637	+	transcript6666.chr2.nic@ADAM23	transcript6666.chr2.nic	protein_coding	206443514,206445307,206481232,206530885,206542052,206543253,206547429,206548281,206550095,206557427,206559955,206561128,206562203,206565020,206567223,206570740,206571727,206573115	206444080,206445524,206481308,206530948,206542134,206543316,206547501,206548354,206550160,206557498,206560118,206561212,206562293,206565068,206567322,206570811,206571816,206573637	Gene ID= ENSG00000114948.12 TPM= 3.19 Transcript Type= NA
chr2	206443539	206621130	206443539	206621130	+	ENST00000264377.7@ADAM23	ENST00000264377.7	protein_coding	206443539,206445307,206481232,206530885,206542052,206543253,206547429,206548281,206550095,206557427,206559955,206561128,206562203,206565020,206567223,206570740,206571727,206573115,206587325,206588091,206589409,206592617,206594737,206596051,206609910,206617579	206444080,206445524,206481308,206530948,206542134,206543316,206547501,206548354,206550160,206557498,206560118,206561212,206562293,206565068,206567322,206570811,206571816,206573195,206587375,206588154,206589514,206592736,206594905,206596162,206610000,206621130	Gene ID= ENSG00000114948.12 TPM= 9.56 Transcript Type= protein_coding
chr2	206765357	206792509	206765357	206792509	+	ENST00000236980.10@FASTKD2	ENST00000236980.10	protein_coding	206765357,206766644,206770091,206771182,206771894,206772181,206774225,206786733,206787937,206788819,206790572,206791683	206765654,206767470,206770194,206771290,206772017,206772320,206774397,206786899,206788155,206788903,206790686,206792509	Gene ID= ENSG00000118246.13 TPM= 10.62 Transcript Type= protein_coding
chr2	206765432	206791889	206765432	206791889	+	ENST00000402774.7@FASTKD2	ENST00000402774.7	protein_coding	206765432,206766644,206770091,206771182,206771894,206772181,206774225,206786733,206787937,206788819,206790572,206791683	206765747,206767470,206770194,206771290,206772017,206772320,206774397,206786899,206788155,206788903,206790686,206791889	Gene ID= ENSG00000118246.13 TPM= 26.55 Transcript Type= protein_coding
chr2	206765606	206791806	206765606	206791806	+	ENST00000403094.3@FASTKD2	ENST00000403094.3	protein_coding	206765606,206766644,206770091,206771182,206771894,206772181,206774225,206786733,206787937,206788819,206790572,206791683	206765762,206767470,206770194,206771290,206772017,206772320,206774397,206786899,206788155,206788903,206790686,206791806	Gene ID= ENSG00000118246.13 TPM= 6.37 Transcript Type= protein_coding
chr2	207074137	207134137	207074137	207134137	-	ENST00000412414.6@KLF7	ENST00000412414.6	protein_coding	207134067,207123774,207088458,207074137	207134137,207124404,207088581,207081264	Gene ID= ENSG00000118263.14 TPM= 2.12 Transcript Type= protein_coding
chr2	207152901	207157239	207152901	207157239	+	transcript6689.chr2.nnic@NA	transcript6689.chr2.nnic	NA	207152901	207157239	Gene ID= novel_gene_chr2_6690 TPM= 24.43 Transcript Type= NA
chr2	207529892	207603431	207529892	207603431	+	ENST00000432329.6@CREB1	ENST00000432329.6	protein_coding	207529892,207555628,207560226,207561119,207567463,207570179,207575272,207577505,207596914	207530134,207555749,207560372,207561160,207567563,207570321,207575454,207577655,207603431	Gene ID= ENSG00000118260.14 TPM= 2.12 Transcript Type= protein_coding
chr2	207529912	207603431	207529912	207603431	+	ENST00000353267.7@CREB1	ENST00000353267.7	protein_coding	207529912,207555628,207560226,207567463,207570179,207575272,207577505,207596914	207530134,207555749,207560372,207567563,207570321,207575454,207577655,207603431	Gene ID= ENSG00000118260.14 TPM= 2.12 Transcript Type= protein_coding
chr2	207529962	207578310	207529962	207578310	+	transcript6708.chr2.nic@CREB1	transcript6708.chr2.nic	protein_coding	207529962,207555628,207560226,207567463,207570179,207575272,207577505	207530134,207555749,207560372,207567563,207570321,207575454,207578310	Gene ID= ENSG00000118260.14 TPM= 2.12 Transcript Type= NA
chr2	207530972	207532711	207530972	207532711	-	transcript6734.chr2.nnic@NA	transcript6734.chr2.nnic	NA	207530972	207532711	Gene ID= novel_gene_chr2_6735 TPM= 2.12 Transcript Type= NA
chr2	207571024	207575940	207571024	207575940	-	transcript6732.chr2.nnic@NA	transcript6732.chr2.nnic	NA	207571024	207575940	Gene ID= novel_gene_chr2_6733 TPM= 3.19 Transcript Type= NA
chr2	207581353	207625313	207581353	207625313	-	transcript6718.chr2.nic@METTL21A	transcript6718.chr2.nic	protein_coding	207625062,207624229,207621806,207581353	207625313,207624404,207621917,207581946	Gene ID= ENSG00000144401.14 TPM= 2.12 Transcript Type= NA
chr2	207581353	207625331	207581353	207625331	-	ENST00000458426.5@METTL21A	ENST00000458426.5	protein_coding	207625062,207624229,207621806,207581353	207625331,207624404,207621917,207582160	Gene ID= ENSG00000144401.14 TPM= 2.66 Transcript Type= protein_coding
chr2	207581353	207624604	207581353	207624604	-	transcript6727.chr2.nic@METTL21A	transcript6727.chr2.nic	protein_coding	207624229,207621806,207581353	207624604,207621917,207582160	Gene ID= ENSG00000144401.14 TPM= 2.66 Transcript Type= NA
chr2	207619174	207625233	207619174	207625233	-	transcript6731.chr2.nic@METTL21A	transcript6731.chr2.nic	protein_coding	207625062,207624229,207619174	207625233,207624404,207621917	Gene ID= ENSG00000144401.14 TPM= 3.19 Transcript Type= NA
chr2	207711686	207756174	207711686	207756174	+	ENST00000295414.7@CCNYL1	ENST00000295414.7	protein_coding	207711686,207724800,207726842,207733947,207737411,207740655,207742223,207747047,207750957,207753588	207712116,207724874,207726876,207734047,207737446,207740706,207742342,207747213,207751119,207756174	Gene ID= ENSG00000163249.11 TPM= 9.56 Transcript Type= protein_coding
chr2	207766619	207768768	207766619	207768768	-	transcript6744.chr2.nnic@NA	transcript6744.chr2.nnic	NA	207766619	207768768	Gene ID= novel_gene_chr2_6745 TPM= 7.44 Transcript Type= NA
chr2	207823606	207825390	207823606	207825390	-	transcript6746.chr2.nnic@NA	transcript6746.chr2.nnic	NA	207823606	207825390	Gene ID= novel_gene_chr2_6747 TPM= 3.19 Transcript Type= NA
chr2	207821288	208025560	207821288	208025560	-	ENST00000427836.7@PLEKHM3	ENST00000427836.7	protein_coding	208025389,208001030,207976651,207946367,207930926,207908514,207861105,207821288	208025560,208001957,207977586,207946512,207931119,207908577,207861262,207828496	Gene ID= ENSG00000178385.14 TPM= 4.25 Transcript Type= protein_coding
chr2	208236232	208254458	208236232	208254458	-	ENST00000446179.5@IDH1	ENST00000446179.5	protein_coding	208254343,208253886,208251430,208248369,208245319,208243427,208241994,208239863,208239071,208236232	208254458,208253959,208251567,208248660,208245424,208243604,208242145,208240003,208239233,208237169	Gene ID= ENSG00000138413.13 TPM= 12.75 Transcript Type= protein_coding
chr2	208236227	208255133	208236227	208255133	-	ENST00000345146.6@IDH1	ENST00000345146.6	protein_coding	208254939,208253886,208251430,208248369,208245319,208243427,208241994,208239863,208239071,208236227	208255133,208253959,208251567,208248660,208245424,208243604,208242145,208240003,208239233,208237169	Gene ID= ENSG00000138413.13 TPM= 26.55 Transcript Type= protein_coding
chr2	208254215	208256104	208254215	208256104	+	transcript6752.chr2.nnic@IDH1-AS1	transcript6752.chr2.nnic	antisense_RNA	208254215,208254815,208255903	208254294,208255082,208256104	Gene ID= ENSG00000231908.1 TPM= 2.12 Transcript Type= NA
chr2	208255247	208256181	208255247	208256181	+	ENST00000440574.1@IDH1-AS1	ENST00000440574.1	antisense_RNA	208255247,208255903	208255431,208256181	Gene ID= ENSG00000231908.1 TPM= 8.5 Transcript Type= antisense_RNA
chr2	209424047	209734118	209424047	209734118	+	transcript6757.chr2.nnic@MAP2	transcript6757.chr2.nnic	protein_coding	209424047,209495518,209507592,209580036,209625053,209653142,209678572,209680750,209700277,209705580,209709914,209723595,209725709,209729850,209730182	209424276,209495629,209507641,209580100,209625129,209653432,209678685,209680827,209700338,209705727,209710254,209723687,209725790,209729962,209734118	Gene ID= ENSG00000078018.19 TPM= 4.96 Transcript Type= NA
chr2	209424046	209734118	209424046	209734118	+	transcript6761.chr2.nic@MAP2	transcript6761.chr2.nic	protein_coding	209424046,209507592,209580036,209625053,209653142,209678572,209680750,209700277,209705580,209709914,209723595,209725709,209729850,209730182	209424276,209507641,209580100,209625129,209653432,209678685,209680827,209700338,209705727,209710254,209723687,209725790,209729962,209734118	Gene ID= ENSG00000078018.19 TPM= 7.08 Transcript Type= NA
chr2	209424057	209734118	209424057	209734118	+	transcript6762.chr2.nnic@MAP2	transcript6762.chr2.nnic	protein_coding	209424057,209580036,209625053,209653142,209678572,209680750,209700277,209705580,209709914,209723595,209725709,209729850,209730182	209424276,209580100,209625129,209653432,209678685,209680827,209700338,209705727,209710254,209723687,209725790,209729962,209734118	Gene ID= ENSG00000078018.19 TPM= 4.96 Transcript Type= NA
chr2	209468319	209471645	209468319	209471645	-	transcript6765.chr2.nnic@NA	transcript6765.chr2.nnic	NA	209468319	209471645	Gene ID= novel_gene_chr2_6766 TPM= 5.31 Transcript Type= NA
chr2	210002565	210021576	210002565	210021576	+	ENST00000359429.10@RPE	ENST00000359429.10	protein_coding	210002565,210009657,210015973,210016507,210017473,210019669	210002783,210009736,210016112,210016641,210017559,210021576	Gene ID= ENSG00000197713.14 TPM= 10.62 Transcript Type= protein_coding
chr2	210002657	210019961	210002657	210019961	+	ENST00000435437.2@RPE	ENST00000435437.2	protein_coding	210002657,210009657,210015973,210016507,210017473,210019673	210002783,210009736,210016112,210016641,210017559,210019961	Gene ID= ENSG00000197713.14 TPM= 2.12 Transcript Type= protein_coding
chr2	210002642	210019940	210002642	210019940	+	ENST00000429907.5@RPE	ENST00000429907.5	protein_coding	210002642,210009657,210015973,210016507,210017473,210018153,210019669	210002783,210009736,210016112,210016641,210017559,210018221,210019940	Gene ID= ENSG00000197713.14 TPM= 1.06 Transcript Type= protein_coding
chr2	210021423	210171383	210021423	210171383	-	ENST00000281772.13@KANSL1L	ENST00000281772.13	protein_coding	210171149,210153495,210129031,210104104,210098086,210075552,210043939,210040420,210031421,210029803,210028845,210027296,210025104,210024033,210021423	210171383,210154611,210129172,210104301,210098207,210075756,210044104,210040527,210031546,210029918,210028969,210027350,210025216,210024201,210023179	Gene ID= ENSG00000144445.16 TPM= 2.12 Transcript Type= protein_coding
chr2	210124509	210127819	210124509	210127819	+	transcript6787.chr2.nnic@NA	transcript6787.chr2.nnic	NA	210124509	210127819	Gene ID= novel_gene_chr2_6788 TPM= 7.44 Transcript Type= NA
chr2	210187939	210225491	210187939	210225491	-	ENST00000233710.3@ACADL	ENST00000233710.3	protein_coding	210225187,210220647,210217965,210216347,210210196,210205632,210204581,210203331,210195211,210192804,210187939	210225491,210220802,210218102,210216511,210210262,210205796,210204682,210203444,210195338,210192890,210189054	Gene ID= ENSG00000115361.7 TPM= 2.12 Transcript Type= protein_coding
chr2	210290150	210303629	210290150	210303629	-	ENST00000341685.8@MYL1	ENST00000341685.8	protein_coding	210303542,210302768,210298420,210294245,210293723,210291032,210290150	210303629,210302792,210298563,210294418,210293800,210291074,210290467	Gene ID= ENSG00000168530.15 TPM= 12.75 Transcript Type= protein_coding
chr2	210431249	210476767	210431249	210476767	-	ENST00000450366.6@LANCL1	ENST00000450366.6	protein_coding	210476620,210476316,210471959,210455107,210441308,210440598,210437690,210436216,210435387,210431249	210476767,210476412,210472076,210455314,210441443,210440744,210437872,210436392,210435459,210434563	Gene ID= ENSG00000115365.11 TPM= 33.99 Transcript Type= protein_coding
chr2	210431249	210476757	210431249	210476757	-	ENST00000441020.7@LANCL1	ENST00000441020.7	protein_coding	210476709,210476316,210471959,210455107,210441308,210440598,210437690,210436216,210435387,210431249	210476757,210476412,210472076,210455314,210441443,210440744,210437872,210436392,210435459,210434563	Gene ID= ENSG00000115365.11 TPM= 19.12 Transcript Type= protein_coding
chr2	210434115	210476705	210434115	210476705	-	ENST00000233714.8@LANCL1	ENST00000233714.8	protein_coding	210476647,210476316,210471959,210455107,210441308,210440598,210437690,210436216,210435387,210434115	210476705,210476412,210472076,210455314,210441443,210440744,210437872,210436392,210435459,210434563	Gene ID= ENSG00000115365.11 TPM= 2.12 Transcript Type= protein_coding
chr2	212325828	212328040	212325828	212328040	+	transcript6812.chr2.nnic@NA	transcript6812.chr2.nnic	NA	212325828	212328040	Gene ID= novel_gene_chr2_6813 TPM= 2.12 Transcript Type= NA
chr2	212344081	212345275	212344081	212345275	+	transcript6814.chr2.nnic@NA	transcript6814.chr2.nnic	NA	212344081	212345275	Gene ID= novel_gene_chr2_6815 TPM= 2.12 Transcript Type= NA
chr2	212536634	212539198	212536634	212539198	+	transcript6816.chr2.nnic@NA	transcript6816.chr2.nnic	NA	212536634	212539198	Gene ID= novel_gene_chr2_6817 TPM= 11.68 Transcript Type= NA
chr2	213005363	213151603	213005363	213151603	-	ENST00000434687.5@IKZF2	ENST00000434687.5	protein_coding	213151413,213150144,213148596,213147708,213056833,213049713,213021993,213013791,213005363	213151603,213150247,213148644,213147812,213057099,213049880,213022130,213013934,213008084	Gene ID= ENSG00000030419.16 TPM= 2.12 Transcript Type= protein_coding
chr2	213284392	213317978	213284392	213317978	+	transcript6819.chr2.nnic@SPAG16	transcript6819.chr2.nnic	protein_coding	213284392,213296064,213297262,213297499,213310059,213317219	213284619,213296110,213297357,213297511,213310177,213317978	Gene ID= ENSG00000144451.18 TPM= 2.84 Transcript Type= NA
chr2	213284392	213317978	213284392	213317978	+	ENST00000432529.6@SPAG16	ENST00000432529.6	protein_coding	213284392,213296064,213297262,213310059,213317219	213284619,213296110,213297357,213310177,213317978	Gene ID= ENSG00000144451.18 TPM= 40.01 Transcript Type= protein_coding
chr2	213284453	213317973	213284453	213317973	+	transcript6826.chr2.nic@SPAG16	transcript6826.chr2.nic	protein_coding	213284453,213296064,213297262,213317219	213284619,213296110,213297357,213317973	Gene ID= ENSG00000144451.18 TPM= 3.9 Transcript Type= NA
chr2	214725646	214809704	214725646	214809704	-	ENST00000260947.8@BARD1	ENST00000260947.8	protein_coding	214809412,214797061,214792297,214780560,214769232,214767482,214752447,214745722,214745067,214730411,214725646	214809704,214797117,214792445,214781509,214769312,214767654,214752555,214745854,214745159,214730508,214729008	Gene ID= ENSG00000138376.10 TPM= 3.19 Transcript Type= protein_coding
chr2	215311817	215349763	215311817	215349763	+	ENST00000236959.13@ATIC	ENST00000236959.13	protein_coding	215311817,215312498,215318157,215319665,215325241,215325987,215326822,215332382,215333350,215334919,215336035,215338779,215344779,215346759,215349094,215349536	215312161,215312624,215318233,215319731,215325329,215326138,215326978,215332507,215333457,215335004,215336124,215338907,215344871,215346941,215349249,215349763	Gene ID= ENSG00000138363.14 TPM= 35.4 Transcript Type= protein_coding
chr2	215312072	215349763	215312072	215349763	+	ENST00000443953.5@ATIC	ENST00000443953.5	protein_coding	215312072,215312498,215318157,215319665,215325241,215325987,215326822,215332382,215333350,215334919,215336035,215338779,215344779,215346759,215349094,215349536	215312390,215312624,215318233,215319731,215325329,215326138,215326978,215332507,215333457,215335004,215336124,215338907,215344871,215346941,215349249,215349763	Gene ID= ENSG00000138363.14 TPM= 4.6 Transcript Type= nonsense_mediated_decay
chr2	215312091	215349763	215312091	215349763	+	ENST00000435675.5@ATIC	ENST00000435675.5	protein_coding	215312091,215318157,215319665,215325241,215325987,215326822,215332382,215333350,215334919,215336035,215338779,215344779,215346759,215349094,215349536	215312624,215318233,215319731,215325329,215326138,215326978,215332507,215333457,215335004,215336124,215338907,215344871,215346941,215349249,215349763	Gene ID= ENSG00000138363.14 TPM= 7.79 Transcript Type= protein_coding
chr2	215360454	215436172	215360454	215436172	-	ENST00000354785.8@FN1	ENST00000354785.8	protein_coding	215435655,215434696,215433324,215431833,215430715,215428180,215425094,215424146,215423350,215422091,215420673,215419242,215414837,215409934,215409563,215408298,215408108,215407127,215406238,215404389,215399257,215397680,215397137,215394528,215392931,215391632,215388212,215386689,215384860,215384020,215383328,215382212,215380811,215379130,215378175,215376498,215375629,215375214,215373322,215371909,215370294,215367863,215365505,215364879,215361969,215360454	215436172,215434824,215433461,215431964,215430852,215428338,215425285,215424325,215423526,215422243,215420801,215419385,215414958,215410114,215409739,215408426,215408197,215407321,215406510,215404655,215399351,215397848,215397223,215394719,215393203,215391814,215388301,215386958,215384976,215384184,215383483,215382325,215381080,215379317,215378262,215376674,215375718,215375393,215373411,215372375,215370432,215368027,215365630,215364985,215362079,215361626	Gene ID= ENSG00000115414.18 TPM= 5.58 Transcript Type= protein_coding
chr2	215360440	215436067	215360440	215436067	-	ENST00000421182.5@FN1	ENST00000421182.5	protein_coding	215435655,215434696,215433324,215431833,215430715,215428180,215425094,215424146,215423350,215422091,215420673,215419242,215414837,215409934,215409563,215408298,215408108,215407127,215406238,215404389,215399257,215397680,215397137,215394528,215391632,215388212,215386689,215384860,215384020,215383328,215382212,215379130,215378175,215376498,215375629,215375214,215373322,215372109,215371909,215370294,215367863,215365505,215364879,215361969,215360440	215436067,215434824,215433461,215431964,215430852,215428338,215425285,215424325,215423526,215422243,215420801,215419385,215414958,215410114,215409739,215408426,215408197,215407321,215406510,215404655,215399351,215397848,215397223,215394719,215391814,215388301,215386958,215384976,215384184,215383483,215382325,215379317,215378262,215376674,215375718,215375393,215373411,215372300,215372015,215370432,215368027,215365630,215364985,215362079,215361626	Gene ID= ENSG00000115414.18 TPM= 4.89 Transcript Type= protein_coding
chr2	215360862	215436073	215360862	215436073	-	ENST00000443816.5@FN1	ENST00000443816.5	protein_coding	215435655,215434696,215433324,215431833,215430715,215428180,215425094,215424146,215423350,215422091,215420673,215419242,215414837,215409934,215409563,215408298,215408108,215407127,215406238,215404389,215399257,215397680,215397137,215394528,215391632,215388212,215386689,215384860,215384020,215383328,215382212,215379130,215378175,215376498,215375629,215375214,215373322,215372109,215371909,215370294,215367863,215365505,215364879,215361969,215360862	215436073,215434824,215433461,215431964,215430852,215428338,215425285,215424325,215423526,215422243,215420801,215419385,215414958,215410114,215409739,215408426,215408197,215407321,215406510,215404655,215399351,215397848,215397223,215394719,215391814,215388301,215386958,215384976,215384184,215383483,215382325,215379317,215378262,215376674,215375718,215375393,215373411,215372375,215372015,215370432,215368027,215365630,215364985,215362079,215361626	Gene ID= ENSG00000115414.18 TPM= 31.95 Transcript Type= protein_coding
chr2	215360454	215436068	215360454	215436068	-	ENST00000357867.8@FN1	ENST00000357867.8	protein_coding	215435655,215434696,215433324,215431833,215430715,215428180,215425094,215424146,215423350,215422091,215420673,215419242,215414837,215409934,215409563,215408298,215408108,215407127,215406238,215404389,215399257,215397680,215397137,215394528,215391632,215388212,215386689,215384860,215384020,215383328,215382212,215379130,215378175,215376498,215375629,215375214,215373322,215371909,215370294,215367863,215365505,215364879,215361969,215360454	215436068,215434824,215433461,215431964,215430852,215428338,215425285,215424325,215423526,215422243,215420801,215419385,215414958,215410114,215409739,215408426,215408197,215407321,215406510,215404655,215399351,215397848,215397223,215394719,215391814,215388301,215386958,215384976,215384184,215383483,215382325,215379317,215378262,215376674,215375718,215375393,215373411,215372015,215370432,215368027,215365630,215364985,215362079,215361626	Gene ID= ENSG00000115414.18 TPM= 9.64 Transcript Type= protein_coding
chr2	215360866	215436068	215360866	215436068	-	ENST00000356005.8@FN1	ENST00000356005.8	protein_coding	215435655,215434696,215433324,215431833,215430715,215428180,215425094,215424146,215423350,215422091,215420673,215419242,215414837,215409934,215409563,215408298,215408108,215407127,215406238,215404389,215399257,215397680,215397137,215394528,215391632,215388212,215386689,215384860,215384020,215383328,215382212,215379130,215378175,215376498,215375629,215375214,215373322,215371909,215370294,215367863,215365505,215364879,215361969,215360866	215436068,215434824,215433461,215431964,215430852,215428338,215425285,215424325,215423526,215422243,215420801,215419385,215414958,215410114,215409739,215408426,215408197,215407321,215406510,215404655,215399351,215397848,215397223,215394719,215391814,215388301,215386958,215384976,215384184,215383483,215382325,215379317,215378262,215376674,215375718,215375393,215373411,215372375,215370432,215368027,215365630,215364985,215362079,215361626	Gene ID= ENSG00000115414.18 TPM= 9.64 Transcript Type= protein_coding
chr2	215414661	215436073	215414661	215436073	-	ENST00000426059.1@FN1	ENST00000426059.1	protein_coding	215435655,215434696,215433324,215431833,215430715,215428180,215425094,215424146,215423350,215422091,215420673,215419242,215414661	215436073,215434824,215433461,215431964,215430852,215428338,215425285,215424325,215423526,215422243,215420801,215419385,215414958	Gene ID= ENSG00000115414.18 TPM= 11.58 Transcript Type= protein_coding
chr2	215431501	215436069	215431501	215436069	-	transcript6852.chr2.nic@FN1	transcript6852.chr2.nic	protein_coding	215435655,215434696,215431501	215436069,215434824,215433461	Gene ID= ENSG00000115414.18 TPM= 3.19 Transcript Type= NA
chr2	216038409	216081816	216038409	216081816	-	ENST00000265322.7@PECR	ENST00000265322.7	protein_coding	216081618,216066385,216065312,216058895,216051449,216049263,216043904,216038409	216081816,216066518,216065477,216058976,216051545,216049373,216044015,216039360	Gene ID= ENSG00000115425.13 TPM= 1.06 Transcript Type= protein_coding
chr2	216109297	216206291	216109297	216206291	+	ENST00000392132.6@XRCC5	ENST00000392132.6	protein_coding	216109297,216113016,216116659,216117746,216119043,216122062,216125917,216127536,216130875,216132325,216137088,216138089,216141186,216148083,216160068,216161979,216190225,216192639,216194919,216204322,216205188	216109457,216113129,216116842,216117794,216119165,216122253,216126031,216127674,216130987,216132387,216137225,216138179,216141319,216148276,216160161,216162048,216190334,216192735,216194986,216204396,216206291	Gene ID= ENSG00000079246.15 TPM= 75.41 Transcript Type= protein_coding
chr2	216172471	216175253	216172471	216175253	-	transcript6866.chr2.nnic@NA	transcript6866.chr2.nnic	NA	216172471	216175253	Gene ID= novel_gene_chr2_6867 TPM= 12.75 Transcript Type= NA
chr2	216412414	216483053	216412414	216483053	+	ENST00000357276.8@SMARCAL1	ENST00000357276.8	protein_coding	216412414,216413856,216414647,216416257,216420299,216423633,216428596,216432718,216435338,216438420,216447018,216450846,216464597,216467944,216475269,216477109,216478203,216482738	216412648,216413892,216415515,216416307,216420532,216423683,216428782,216432868,216435496,216438485,216447158,216451064,216464667,216468046,216475451,216477209,216478299,216483053	Gene ID= ENSG00000138375.12 TPM= 12.03 Transcript Type= protein_coding
chr2	216412444	216483017	216412444	216483017	+	transcript6872.chr2.nic@SMARCAL1	transcript6872.chr2.nic	protein_coding	216412444,216413856,216414647,216416257,216420299,216423633,216428596,216432718,216435338,216438420,216447018,216450846,216464597,216467944,216475269,216477109,216478203,216482738	216412603,216413892,216415515,216416307,216420532,216423683,216428782,216432868,216435496,216438485,216447158,216451064,216464667,216468046,216475451,216477209,216478299,216483017	Gene ID= ENSG00000138375.12 TPM= 2.47 Transcript Type= NA
chr2	216412743	216483017	216412743	216483017	+	ENST00000358207.9@SMARCAL1	ENST00000358207.9	protein_coding	216412743,216413856,216414647,216416257,216420299,216423633,216428596,216432718,216435338,216438420,216447018,216450846,216464597,216467944,216475269,216477109,216478203,216482738	216412798,216413892,216415515,216416307,216420532,216423683,216428782,216432868,216435496,216438485,216447158,216451064,216464667,216468046,216475451,216477209,216478299,216483017	Gene ID= ENSG00000138375.12 TPM= 1.41 Transcript Type= protein_coding
chr2	216497590	216498770	216497590	216498770	-	transcript6878.chr2.nnic@AC098820.1	transcript6878.chr2.nnic	processed_transcript	216498607,216497590	216498770,216497833	Gene ID= ENSG00000232485.2 TPM= 2.12 Transcript Type= NA
chr2	216498189	216504086	216498189	216504086	+	ENST00000491306.5@RPL37A	ENST00000491306.5	protein_coding	216498189,216499270,216499949,216501341	216498877,216499398,216500031,216504086	Gene ID= ENSG00000197756.9 TPM= 166.76 Transcript Type= protein_coding
chr2	216498825	216501467	216498825	216501467	+	ENST00000490649.1@RPL37A	ENST00000490649.1	protein_coding	216498825,216499270,216499949	216498877,216499398,216501467	Gene ID= ENSG00000197756.9 TPM= 2.12 Transcript Type= retained_intron
chr2	216498867	216501467	216498867	216501467	+	ENST00000359681.3@RPL37A	ENST00000359681.3	protein_coding	216498867,216499949,216501341	216499398,216500031,216501467	Gene ID= ENSG00000197756.9 TPM= 43.55 Transcript Type= retained_intron
chr2	216633395	216664436	216633395	216664436	+	ENST00000233809.8@IGFBP2	ENST00000233809.8	protein_coding	216633395,216660557,216661858,216663940	216633965,216660786,216661998,216664436	Gene ID= ENSG00000115457.9 TPM= 3904.14 Transcript Type= protein_coding
chr2	216672105	216695525	216672105	216695525	-	ENST00000233813.4@IGFBP5	ENST00000233813.4	protein_coding	216694439,216678850,216678112,216672105	216695525,216679079,216678231,216676882	Gene ID= ENSG00000115461.4 TPM= 238.99 Transcript Type= protein_coding
chr2	217799789	217944128	217799789	217944128	-	ENST00000171887.8@TNS1	ENST00000171887.8	protein_coding	217943865,217920195,217907210,217906335,217900463,217897798,217895006,217893439,217892948,217890962,217886534,217886044,217885744,217885035,217882346,217880898,217847510,217836015,217835091,217831455,217830367,217829844,217821740,217817690,217814912,217813685,217813215,217812368,217810248,217809823,217808603,217808075,217799789	217944128,217920236,217907251,217906385,217900512,217897969,217895056,217893561,217893012,217891045,217886646,217886104,217885819,217885164,217882411,217881014,217849087,217836211,217835166,217831547,217830390,217829882,217821938,217818759,217814998,217813816,217813307,217812445,217810319,217809991,217808671,217808107,217804603	Gene ID= ENSG00000079308.16 TPM= 1727.6 Transcript Type= protein_coding
chr2	217912963	217917846	217912963	217917846	+	transcript6928.chr2.nnic@NA	transcript6928.chr2.nnic	NA	217912963	217917846	Gene ID= novel_gene_chr2_6929 TPM= 12.75 Transcript Type= NA
chr2	217957930	217963759	217957930	217963759	+	transcript6937.chr2.nnic@NA	transcript6937.chr2.nnic	NA	217957930	217963759	Gene ID= novel_gene_chr2_6938 TPM= 3.19 Transcript Type= NA
chr2	217966556	217970918	217966556	217970918	+	transcript6939.chr2.nnic@NA	transcript6939.chr2.nnic	NA	217966556	217970918	Gene ID= novel_gene_chr2_6940 TPM= 2.12 Transcript Type= NA
chr2	218126004	218137253	218126004	218137253	+	ENST00000318507.6@CXCR2	ENST00000318507.6	protein_coding	218126004,218129314,218134777	218126353,218129365,218137253	Gene ID= ENSG00000180871.7 TPM= 1.06 Transcript Type= protein_coding
chr2	218217141	218249904	218217141	218249904	+	transcript6948.chr2.nic@ARPC2	transcript6948.chr2.nic	protein_coding	218217141,218217463,218225920,218228738,218234352,218238664,218239391,218245420,218249364,218249821	218217254,218217544,218225954,218228850,218234397,218238850,218239484,218245546,218249464,218249904	Gene ID= ENSG00000163466.15 TPM= 23.37 Transcript Type= NA
chr2	218217094	218254348	218217094	218254348	+	ENST00000315717.9@ARPC2	ENST00000315717.9	protein_coding	218217094,218217463,218225920,218228738,218234352,218238664,218239391,218245420,218249364,218249821,218253891	218217254,218217544,218225954,218228850,218234397,218238850,218239484,218245546,218249464,218249921,218254348	Gene ID= ENSG00000163466.15 TPM= 161.45 Transcript Type= protein_coding
chr2	218261015	218263859	218261015	218263859	+	ENST00000519574.1@GPBAR1	ENST00000519574.1	protein_coding	218261015,218262680	218261216,218263859	Gene ID= ENSG00000179921.14 TPM= 1.06 Transcript Type= protein_coding
chr2	218264123	218270257	218264123	218270257	-	ENST00000248450.8@AAMP	ENST00000248450.8	protein_coding	218269966,218269382,218267494,218266847,218266443,218266064,218265831,218265579,218265371,218265020,218264123	218270257,218269534,218267613,218266986,218266587,218266147,218265946,218265682,218265461,218265174,218264608	Gene ID= ENSG00000127837.9 TPM= 176.14 Transcript Type= protein_coding
chr2	218264129	218270178	218264129	218270178	-	ENST00000444053.5@AAMP	ENST00000444053.5	protein_coding	218269966,218269382,218267494,218266847,218266443,218266064,218265831,218265579,218265371,218265020,218264129	218270178,218269537,218267613,218266986,218266587,218266147,218265946,218265682,218265461,218265174,218264608	Gene ID= ENSG00000127837.9 TPM= 17.35 Transcript Type= protein_coding
chr2	218264162	218269740	218264162	218269740	-	ENST00000420660.5@AAMP	ENST00000420660.5	protein_coding	218269382,218267494,218266847,218266443,218266064,218265831,218265579,218265371,218265020,218264162	218269740,218267613,218266986,218266587,218266147,218265946,218265682,218265461,218265174,218264608	Gene ID= ENSG00000127837.9 TPM= 1.06 Transcript Type= protein_coding
chr2	218270392	218272947	218270392	218272947	+	ENST00000248451.7@PNKD	ENST00000248451.7	protein_coding	218270392,218271381,218272570	218270602,218271549,218272947	Gene ID= ENSG00000127838.13 TPM= 181.63 Transcript Type= protein_coding
chr2	218270519	218272939	218270519	218272939	+	transcript6990.chr2.nnic@NA	transcript6990.chr2.nnic	NA	218270519	218272939	Gene ID= novel_gene_chr2_6991 TPM= 2.12 Transcript Type= NA
chr2	218274201	218287300	218274201	218287300	-	transcript6972.chr2.nic@TMBIM1	transcript6972.chr2.nic	protein_coding	218287207,218281940,218280026,218279289,218279038,218278515,218277935,218277633,218277366,218277004,218276026,218274201	218287300,218282181,218280126,218279353,218279091,218278565,218277974,218277670,218277453,218277099,218276079,218275621	Gene ID= ENSG00000135926.14 TPM= 43.81 Transcript Type= NA
chr2	218274192	218292577	218274192	218292577	-	ENST00000258412.7@TMBIM1	ENST00000258412.7	protein_coding	218292466,218281940,218280026,218279289,218279038,218278515,218277935,218277633,218277366,218277004,218276026,218274192	218292577,218282181,218280126,218279353,218279091,218278565,218277974,218277670,218277453,218277099,218276079,218275621	Gene ID= ENSG00000135926.14 TPM= 186.94 Transcript Type= protein_coding
chr2	218323173	218346791	218323173	218346791	+	ENST00000258362.7@PNKD	ENST00000258362.7	protein_coding	218323173,218339783,218340029,218340728,218341534,218341981,218343500,218344455,218344808	218323431,218339898,218340141,218340786,218341626,218342144,218343586,218344570,218346791	Gene ID= ENSG00000127838.13 TPM= 5.31 Transcript Type= protein_coding
chr2	218366665	218367865	218366665	218367865	-	transcript6995.chr2.nnic@CATIP-AS1	transcript6995.chr2.nnic	processed_transcript	218367591,218366927,218366665	218367865,218367086,218366798	Gene ID= ENSG00000225062.1 TPM= 2.12 Transcript Type= NA
chr2	218382029	218396894	218382029	218396894	+	ENST00000233202.10@SLC11A1	ENST00000233202.10	protein_coding	218382029,218382960,218384243,218385147,218386635,218387160,218387565,218387800,218389870,218391198,218391376,218392981,218394120,218394632,218394925	218382375,218383102,218384365,218385266,218386741,218387230,218387632,218387955,218390028,218391287,218391495,218393130,218394193,218394785,218396894	Gene ID= ENSG00000018280.16 TPM= 1.06 Transcript Type= protein_coding
chr2	218395646	218395774	218395646	218395774	+	transcript6998.chr2.nnic@NA	transcript6998.chr2.nnic	NA	218395646	218395774	Gene ID= novel_gene_chr2_6999 TPM= 5.31 Transcript Type= NA
chr2	218399755	218405941	218399755	218405941	+	ENST00000273062.6@CTDSP1	ENST00000273062.6	protein_coding	218399755,218401564,218402111,218402349,218403035,218403232,218404297	218400157,218401712,218402215,218402405,218403127,218403417,218405941	Gene ID= ENSG00000144579.7 TPM= 108.34 Transcript Type= protein_coding
chr2	218403467	218404338	218403467	218404338	+	transcript7009.chr2.nnic@NA	transcript7009.chr2.nnic	NA	218403467	218404338	Gene ID= novel_gene_chr2_7010 TPM= 2.12 Transcript Type= NA
chr2	218564931	218566251	218564931	218566251	-	transcript7012.chr2.nnic@NA	transcript7012.chr2.nnic	NA	218564931	218566251	Gene ID= novel_gene_chr2_7013 TPM= 2.12 Transcript Type= NA
chr2	218568580	218597080	218568580	218597080	+	ENST00000273064.10@CNOT9	ENST00000273064.10	protein_coding	218568580,218580561,218582971,218584612,218587586,218592304,218592616,218594108	218568978,218580740,218583086,218584721,218587695,218592402,218592707,218597080	Gene ID= ENSG00000144580.13 TPM= 18.06 Transcript Type= protein_coding
chr2	218568875	218593842	218568875	218593842	+	ENST00000295701.9@CNOT9	ENST00000295701.9	protein_coding	218568875,218580561,218582971,218584612,218587586,218592304,218592616,218593528	218568978,218580740,218583086,218584721,218587695,218592402,218592707,218593842	Gene ID= ENSG00000144580.13 TPM= 10.62 Transcript Type= protein_coding
chr2	218607765	218637181	218607765	218637181	+	ENST00000450993.6@PLCD4	ENST00000450993.6	protein_coding	218607765,218615707,218615904,218618579,218621470,218622647,218628029,218629519,218630650,218632136,218633605,218634105,218634458,218635796,218636243,218636471	218608070,218615761,218616062,218618807,218621599,218622878,218628230,218629663,218630802,218632312,218633761,218634221,218634630,218635931,218636392,218637181	Gene ID= ENSG00000115556.13 TPM= 2.12 Transcript Type= protein_coding
chr2	218633338	218635628	218633338	218635628	-	transcript7044.chr2.nnic@NA	transcript7044.chr2.nnic	NA	218633338	218635628	Gene ID= novel_gene_chr2_7045 TPM= 3.19 Transcript Type= NA
chr2	218643018	218647433	218643018	218647433	+	transcript7040.chr2.nnic@NA	transcript7040.chr2.nnic	NA	218643018	218647433	Gene ID= novel_gene_chr2_7041 TPM= 2.12 Transcript Type= NA
chr2	218659714	218663443	218659714	218663443	+	transcript7025.chr2.nic@BCS1L	transcript7025.chr2.nic	protein_coding	218659714,218660307,218660939,218661406,218661759,218662197,218662510,218662883,218663134	218659743,218660421,218661307,218661545,218661953,218662260,218662679,218663000,218663443	Gene ID= ENSG00000074582.12 TPM= 4.2 Transcript Type= NA
chr2	218659656	218663443	218659656	218663443	+	ENST00000359273.7@BCS1L	ENST00000359273.7	protein_coding	218659656,218660939,218661406,218661759,218662197,218662510,218662883,218663134	218659743,218661307,218661545,218661953,218662260,218662679,218663000,218663443	Gene ID= ENSG00000074582.12 TPM= 30.75 Transcript Type= protein_coding
chr2	218659672	218663443	218659672	218663443	+	transcript7035.chr2.nic@BCS1L	transcript7035.chr2.nic	protein_coding	218659672,218661406,218661759,218662197,218662510,218662883,218663134	218659743,218661545,218661953,218662260,218662679,218663000,218663443	Gene ID= ENSG00000074582.12 TPM= 4.56 Transcript Type= NA
chr2	218659717	218663443	218659717	218663443	+	transcript7036.chr2.nic@BCS1L	transcript7036.chr2.nic	protein_coding	218659717,218661406,218661759,218662197,218662510,218662883,218663134	218661307,218661520,218661953,218662260,218662679,218663000,218663443	Gene ID= ENSG00000074582.12 TPM= 2.43 Transcript Type= NA
chr2	218659708	218663443	218659708	218663443	+	transcript7038.chr2.nnic@BCS1L	transcript7038.chr2.nnic	protein_coding	218659708,218661759,218662197,218662510,218662883,218663134	218659743,218661953,218662260,218662679,218663000,218663443	Gene ID= ENSG00000074582.12 TPM= 3.49 Transcript Type= NA
chr2	218659760	218663404	218659760	218663404	+	ENST00000439945.5@BCS1L	ENST00000439945.5	protein_coding	218659760,218660307,218660939,218661406,218661759,218662197,218662510,218662883,218663134	218659800,218660421,218661307,218661545,218661953,218662260,218662679,218663000,218663404	Gene ID= ENSG00000074582.12 TPM= 1.06 Transcript Type= protein_coding
chr2	218659737	218663443	218659737	218663443	+	ENST00000412366.5@BCS1L	ENST00000412366.5	protein_coding	218659737,218660939,218661406,218661759,218662197,218662510,218662883,218663134	218659800,218661307,218661545,218661953,218662260,218662679,218663000,218663443	Gene ID= ENSG00000074582.12 TPM= 5.26 Transcript Type= protein_coding
chr2	218663864	218672411	218663864	218672411	-	ENST00000295704.6@RNF25	ENST00000295704.6	protein_coding	218671930,218668605,218668239,218668079,218667912,218666159,218665916,218665155,218664739,218663864	218672411,218668679,218668341,218668146,218667981,218666230,218666059,218665247,218664873,218664535	Gene ID= ENSG00000163481.7 TPM= 37.71 Transcript Type= protein_coding
chr2	218663892	218670721	218663892	218670721	-	transcript7029.chr2.nic@RNF25	transcript7029.chr2.nic	protein_coding	218668605,218668239,218668079,218667912,218666159,218665916,218665155,218664739,218663892	218670721,218668341,218668146,218667981,218666230,218666059,218665247,218664873,218664535	Gene ID= ENSG00000163481.7 TPM= 4.78 Transcript Type= NA
chr2	218676621	218679330	218676621	218679330	-	transcript7042.chr2.nnic@NA	transcript7042.chr2.nnic	NA	218676621	218679330	Gene ID= novel_gene_chr2_7043 TPM= 4.25 Transcript Type= NA
chr2	218781756	218815293	218781756	218815293	+	ENST00000258415.8@CYP27A1	ENST00000258415.8	protein_coding	218781756,218809577,218812222,218812552,218812924,218814021,218814380,218814545,218814911	218782437,218809767,218812421,218812749,218813096,218814187,218814458,218814757,218815293	Gene ID= ENSG00000135929.8 TPM= 7.44 Transcript Type= protein_coding
chr2	218801981	218803715	218801981	218803715	-	transcript7050.chr2.nnic@NA	transcript7050.chr2.nnic	NA	218801981	218803715	Gene ID= novel_gene_chr2_7051 TPM= 3.19 Transcript Type= NA
chr2	219075321	219160853	219075321	219160853	-	ENST00000356853.9@NHEJ1	ENST00000356853.9	protein_coding	219160720,219158186,219157472,219147657,219146680,219078089,219077246,219075321	219160853,219158362,219157684,219147795,219146738,219078206,219077364,219076455	Gene ID= ENSG00000187736.12 TPM= 6.37 Transcript Type= protein_coding
chr2	219171897	219178180	219171897	219178180	-	transcript7057.chr2.nnic@CNPPD1	transcript7057.chr2.nnic	protein_coding	219178121,219176760,219176223,219175591,219174988,219174778,219174146,219173350,219171897	219178180,219176847,219176331,219175672,219175108,219174906,219174207,219173467,219173128	Gene ID= ENSG00000115649.15 TPM= 14.87 Transcript Type= NA
chr2	219171897	219176966	219171897	219176966	-	ENST00000360507.9@CNPPD1	ENST00000360507.9	protein_coding	219176760,219176223,219175591,219174988,219174778,219174146,219173350,219171897	219176966,219176331,219175672,219175108,219174906,219174207,219173467,219173128	Gene ID= ENSG00000115649.15 TPM= 225.18 Transcript Type= protein_coding
chr2	219178227	219183492	219178227	219183492	+	ENST00000273048.2@RETREG2	ENST00000273048.2	protein_coding	219178227,219178922,219179733,219180198,219180670,219181062,219181369,219181640,219182013	219178633,219179028,219179763,219180245,219180754,219181205,219181463,219181775,219183492	Gene ID= ENSG00000144567.10 TPM= 7.44 Transcript Type= nonsense_mediated_decay
chr2	219206793	219209651	219206793	219209651	+	ENST00000289528.9@ZFAND2B	ENST00000289528.9	protein_coding	219206793,219207327,219207648,219207887,219208256,219208426,219208572,219208977,219209262	219207042,219207421,219207779,219208038,219208348,219208486,219208639,219209049,219209651	Gene ID= ENSG00000158552.12 TPM= 20.71 Transcript Type= protein_coding
chr2	219206784	219209651	219206784	219209651	+	ENST00000444522.6@ZFAND2B	ENST00000444522.6	protein_coding	219206784,219206970,219207327,219207648,219207887,219208256,219208426,219208572,219208977,219209262	219206845,219207042,219207421,219207779,219208038,219208348,219208486,219208639,219209049,219209651	Gene ID= ENSG00000158552.12 TPM= 23.9 Transcript Type= protein_coding
chr2	219206807	219209606	219206807	219209606	+	ENST00000409097.5@ZFAND2B	ENST00000409097.5	protein_coding	219206807,219206970,219207327,219207648,219207887,219208256,219208426	219206845,219207042,219207421,219207779,219208038,219208348,219209606	Gene ID= ENSG00000158552.12 TPM= 2.12 Transcript Type= protein_coding
chr2	219209772	219218826	219209772	219218826	-	transcript7075.chr2.nic@ABCB6	transcript7075.chr2.nic	protein_coding	219218125,219217670,219216364,219215997,219214961,219214389,219214121,219213826,219213590,219213439,219213241,219213008,219212387,219210934,219210711,219210381,219210230,219209772	219218826,219217807,219216465,219216180,219215082,219214498,219214186,219213951,219213666,219213502,219213326,219213065,219212491,219211108,219210823,219210475,219210298,219210046	Gene ID= ENSG00000115657.12 TPM= 4.78 Transcript Type= NA
chr2	219209768	219218990	219209768	219218990	-	ENST00000265316.7@ABCB6	ENST00000265316.7	protein_coding	219218125,219217670,219216652,219216364,219215997,219214961,219214389,219214121,219213826,219213590,219213439,219213241,219213008,219212387,219210934,219210711,219210381,219210230,219209768	219218990,219217807,219216832,219216465,219216180,219215082,219214498,219214186,219213951,219213666,219213502,219213326,219213065,219212491,219211108,219210823,219210475,219210298,219210046	Gene ID= ENSG00000115657.12 TPM= 24.96 Transcript Type= protein_coding
chr2	219219382	219229368	219219382	219229368	-	ENST00000409618.5@ATG9A	ENST00000409618.5	protein_coding	219229010,219228434,219227922,219227770,219226869,219225411,219225071,219224106,219223869,219223585,219222645,219222272,219222050,219221080,219220747,219219382	219229368,219228485,219228053,219227813,219226933,219225572,219225212,219224854,219224022,219223764,219222893,219222450,219222167,219221302,219220892,219220452	Gene ID= ENSG00000198925.10 TPM= 35.05 Transcript Type= protein_coding
chr2	219219380	219229717	219219380	219229717	-	ENST00000396761.6@ATG9A	ENST00000396761.6	protein_coding	219229535,219227922,219227770,219226869,219225411,219225071,219224106,219223869,219223585,219222645,219222272,219222050,219221080,219220747,219219380	219229717,219228053,219227813,219226933,219225572,219225212,219224854,219224022,219223764,219222893,219222450,219222167,219221302,219220892,219220452	Gene ID= ENSG00000198925.10 TPM= 57.36 Transcript Type= protein_coding
chr2	219229757	219236669	219229757	219236669	+	ENST00000323348.9@ANKZF1	ENST00000323348.9	protein_coding	219229757,219230228,219231928,219232260,219232490,219233079,219233286,219233715,219234133,219234826,219235474,219235708,219236010,219236322	219229900,219230405,219232040,219232362,219232683,219233191,219233433,219233943,219234288,219235312,219235585,219235875,219236095,219236669	Gene ID= ENSG00000163516.13 TPM= 13.81 Transcript Type= protein_coding
chr2	219229816	219236651	219229816	219236651	+	transcript7099.chr2.nic@ANKZF1	transcript7099.chr2.nic	protein_coding	219229816,219230228,219231928,219232260,219232490,219233079,219233286,219233715,219234133,219236010,219236322	219229900,219230405,219232040,219232362,219232683,219233191,219233433,219233943,219235875,219236095,219236651	Gene ID= ENSG00000163516.13 TPM= 2.12 Transcript Type= NA
chr2	219229787	219236669	219229787	219236669	+	ENST00000409849.5@ANKZF1	ENST00000409849.5	protein_coding	219229787,219232490,219233079,219233286,219233715,219234133,219234826,219235474,219235708,219236010,219236322	219229900,219232683,219233191,219233433,219233943,219234288,219235312,219235585,219235875,219236095,219236669	Gene ID= ENSG00000163516.13 TPM= 2.12 Transcript Type= protein_coding
chr2	219236771	219245478	219236771	219245478	-	ENST00000392089.6@GLB1L	ENST00000392089.6	protein_coding	219245229,219243502,219243148,219242768,219242514,219240191,219239920,219239775,219239561,219239411,219239092,219238705,219238495,219238250,219237826,219237512,219236771	219245478,219243631,219243314,219242918,219242574,219240285,219240094,219239833,219239682,219239451,219239210,219238779,219238584,219238363,219237957,219237727,219237347	Gene ID= ENSG00000163521.15 TPM= 2.12 Transcript Type= protein_coding
chr2	219245455	219250337	219245455	219250337	+	ENST00000409638.7@STK16	ENST00000409638.7	protein_coding	219245455,219245896,219246657,219247113,219247415,219247662,219248193,219248421	219245522,219246085,219246876,219247246,219247535,219247757,219248314,219250337	Gene ID= ENSG00000115661.13 TPM= 1.06 Transcript Type= protein_coding
chr2	219249711	219254032	219249711	219254032	-	ENST00000248437.8@TUBA4A	ENST00000248437.8	protein_coding	219253856,219252008,219251565,219249711	219254032,219252230,219251713,219251323	Gene ID= ENSG00000127824.13 TPM= 10.62 Transcript Type= protein_coding
chr2	219250284	219254617	219250284	219254617	-	transcript7122.chr2.nnic@TUBA4A	transcript7122.chr2.nnic	protein_coding	219254220,219252008,219251565,219250284	219254617,219252230,219251713,219251323	Gene ID= ENSG00000127824.13 TPM= 7.44 Transcript Type= NA
chr2	219279344	219286898	219279344	219286898	+	ENST00000392086.8@DNAJB2	ENST00000392086.8	protein_coding	219279344,219279798,219280578,219281718,219281939,219282837,219283133,219283419,219284632,219285987	219279518,219279898,219280687,219281771,219282061,219282929,219283235,219283489,219284835,219286898	Gene ID= ENSG00000135924.15 TPM= 26.55 Transcript Type= protein_coding
chr2	219279267	219286900	219279267	219286900	+	ENST00000336576.9@DNAJB2	ENST00000336576.9	protein_coding	219279267,219279798,219280578,219281718,219281939,219282837,219283133,219283419,219284632	219279518,219279898,219280687,219281771,219282061,219282929,219283235,219283489,219286900	Gene ID= ENSG00000135924.15 TPM= 2.12 Transcript Type= protein_coding
chr2	219289623	219309573	219289623	219309573	-	ENST00000295718.6@PTPRN	ENST00000295718.6	protein_coding	219309218,219307792,219307444,219303735,219302576,219302137,219301588,219300943,219299985,219299700,219299305,219299047,219297885,219297233,219296985,219296749,219296439,219296226,219294975,219291470,219290826,219290538,219289623	219309573,219307842,219307557,219303831,219302837,219302491,219301719,219300977,219300259,219299786,219299384,219299111,219298103,219297433,219297132,219296822,219296516,219296345,219295141,219291523,219290890,219290611,219290297	Gene ID= ENSG00000054356.13 TPM= 2.12 Transcript Type= protein_coding
chr2	219372028	219373302	219372028	219373302	-	transcript7503.chr2.nnic@NA	transcript7503.chr2.nnic	NA	219372028	219373302	Gene ID= novel_gene_chr2_7504 TPM= 2.12 Transcript Type= NA
chr2	219373546	219388015	219373546	219388015	-	ENST00000273075.8@DNPEP	ENST00000273075.8	protein_coding	219387759,219387070,219386892,219386665,219386286,219385968,219385631,219385424,219384366,219383131,219381979,219381545,219381335,219374855,219373546	219388015,219387163,219386980,219386778,219386411,219386098,219385706,219385531,219384443,219383214,219382139,219381584,219381436,219375022,219374342	Gene ID= ENSG00000123992.18 TPM= 5.31 Transcript Type= protein_coding
chr2	219374196	219387932	219374196	219387932	-	ENST00000373966.5@DNPEP	ENST00000373966.5	protein_coding	219387576,219387070,219386892,219386665,219386286,219385968,219385631,219385424,219384366,219383131,219381979,219381545,219381335,219374855,219374196	219387932,219387163,219386980,219386778,219386411,219386098,219385706,219385531,219384443,219383214,219382139,219381584,219381436,219375022,219374342	Gene ID= ENSG00000123992.18 TPM= 3.19 Transcript Type= nonsense_mediated_decay
chr2	219374196	219387929	219374196	219387929	-	ENST00000373963.5@DNPEP	ENST00000373963.5	protein_coding	219387759,219387070,219386892,219386665,219386286,219385968,219385631,219385424,219384366,219383131,219381979,219381545,219381335,219374855,219374196	219387929,219387163,219386948,219386778,219386411,219386098,219385706,219385531,219384443,219383214,219382139,219381584,219381436,219375022,219374342	Gene ID= ENSG00000123992.18 TPM= 1.06 Transcript Type= nonsense_mediated_decay
chr2	219418377	219426739	219418377	219426739	+	ENST00000373960.3@DES	ENST00000373960.3	protein_coding	219418377,219420095,219420251,219420495,219420828,219421340,219423777,219425663,219425949	219419040,219420155,219420346,219420656,219420953,219421560,219423820,219425745,219426739	Gene ID= ENSG00000175084.11 TPM= 45087.56 Transcript Type= protein_coding
chr2	219426927	219427987	219426927	219427987	+	transcript7526.chr2.nnic@NA	transcript7526.chr2.nnic	NA	219426927	219427987	Gene ID= novel_gene_chr2_7527 TPM= 3.19 Transcript Type= NA
chr2	219427477	219429319	219427477	219429319	+	ENST00000623864.1@AC053503.6	ENST00000623864.1	TEC	219427477	219429319	Gene ID= ENSG00000280323.1 TPM= 19.12 Transcript Type= TEC
chr2	219434846	219493632	219434846	219493632	+	ENST00000312358.11@SPEG	ENST00000312358.11	protein_coding	219434846,219444653,219444825,219447974,219451136,219451625,219461882,219462298,219464433,219467174,219468578,219468859,219469156,219471868,219472227,219472890,219473504,219473728,219476870,219477277,219477689,219477905,219479144,219479783,219479962,219480671,219481304,219481638,219482784,219483098,219485346,219488194,219488498,219488778,219489054,219489336,219490409,219490733,219491794,219492111,219492594	219435365,219444742,219445161,219449271,219451279,219451807,219462057,219462386,219464608,219467434,219468736,219469048,219469379,219471987,219472331,219473096,219473627,219473903,219476982,219477445,219477785,219478105,219479201,219479860,219480140,219480697,219481456,219481680,219482852,219485072,219485477,219488310,219488665,219488900,219489221,219489939,219490648,219490956,219491869,219492260,219493632	Gene ID= ENSG00000072195.14 TPM= 169.95 Transcript Type= protein_coding
chr2	219434717	219466862	219434717	219466862	+	transcript7511.chr2.nic@SPEG	transcript7511.chr2.nic	protein_coding	219434717,219444653,219444825,219447974,219451136,219451625,219461882,219462298,219464433,219466057	219435365,219444742,219445161,219449271,219451279,219451807,219462057,219462386,219464608,219466862	Gene ID= ENSG00000072195.14 TPM= 72.94 Transcript Type= NA
chr2	219460766	219466841	219460766	219466841	+	ENST00000396688.5@SPEG	ENST00000396688.5	protein_coding	219460766,219461882,219462298,219464433,219466057	219460996,219462057,219462386,219464608,219466841	Gene ID= ENSG00000072195.14 TPM= 22.31 Transcript Type= protein_coding
chr2	219461385	219466862	219461385	219466862	+	ENST00000396689.2@SPEG	ENST00000396689.2	protein_coding	219461385,219461882,219462298,219464433,219466057	219461411,219462057,219462386,219464608,219466862	Gene ID= ENSG00000072195.14 TPM= 14.52 Transcript Type= protein_coding
chr2	219446977	219449944	219446977	219449944	-	transcript7530.chr2.nnic@NA	transcript7530.chr2.nnic	NA	219446977	219449944	Gene ID= novel_gene_chr2_7531 TPM= 13.81 Transcript Type= NA
chr2	219464072	219465490	219464072	219465490	-	transcript7534.chr2.nnic@NA	transcript7534.chr2.nnic	NA	219464072	219465490	Gene ID= novel_gene_chr2_7535 TPM= 2.12 Transcript Type= NA
chr2	219491450	219493628	219491450	219493628	+	transcript7524.chr2.nnic@NA	transcript7524.chr2.nnic	NA	219491450	219493628	Gene ID= novel_gene_chr2_7525 TPM= 74.35 Transcript Type= NA
chr2	219498863	219506987	219498863	219506987	+	transcript7536.chr2.nnic@GMPPA	transcript7536.chr2.nnic	protein_coding	219498863,219499961,219500121,219501476,219501851,219502382,219504083,219504854,219505228,219505458,219505715,219505980,219506254,219506698	219498938,219500015,219500218,219501579,219502037,219502441,219504213,219504868,219505362,219505555,219505761,219506072,219506422,219506987	Gene ID= ENSG00000144591.18 TPM= 7.79 Transcript Type= NA
chr2	219498889	219506987	219498889	219506987	+	transcript7539.chr2.nnic@GMPPA	transcript7539.chr2.nnic	protein_coding	219498889,219499956,219500121,219501476,219501851,219502382,219504083,219504854,219505228,219505458,219505715,219505980,219506254,219506698	219499254,219500015,219500218,219501579,219502037,219502441,219504213,219504868,219505362,219505555,219505761,219506072,219506422,219506987	Gene ID= ENSG00000144591.18 TPM= 9.38 Transcript Type= NA
chr2	219498867	219506987	219498867	219506987	+	ENST00000313597.9@GMPPA	ENST00000313597.9	protein_coding	219498867,219499956,219500121,219501476,219501851,219502382,219504083,219505228,219505458,219505715,219505980,219506254,219506698	219498938,219500015,219500218,219501579,219502037,219502441,219504213,219505362,219505555,219505761,219506072,219506422,219506987	Gene ID= ENSG00000144591.18 TPM= 5.31 Transcript Type= protein_coding
chr2	219538947	219543787	219538947	219543787	-	ENST00000243776.10@CHPF	ENST00000243776.10	protein_coding	219543225,219541616,219540946,219538947	219543787,219542189,219541125,219540642	Gene ID= ENSG00000123989.13 TPM= 458.85 Transcript Type= protein_coding
chr2	219541460	219543573	219541460	219543573	-	ENST00000373891.2@CHPF	ENST00000373891.2	protein_coding	219543225,219541460	219543573,219542189	Gene ID= ENSG00000123989.13 TPM= 5.31 Transcript Type= protein_coding
chr2	219550729	219571555	219550729	219571555	-	transcript7599.chr2.nic@OBSL1	transcript7599.chr2.nic	protein_coding	219570221,219568055,219567718,219567273,219566830,219565242,219563355,219562402,219559225,219558184,219557823,219557343,219556454,219556020,219554474,219553574,219552868,219552536,219552112,219551529,219550729	219571555,219568324,219567969,219567575,219567126,219565514,219563627,219562674,219559497,219558459,219558110,219557618,219556723,219556292,219554740,219553686,219553024,219552697,219552216,219551798,219550868	Gene ID= ENSG00000124006.14 TPM= 20.53 Transcript Type= NA
chr2	219550742	219571289	219550742	219571289	-	ENST00000404537.5@OBSL1	ENST00000404537.5	protein_coding	219570221,219568055,219567718,219567273,219566830,219565242,219563355,219562402,219559225,219558184,219557823,219557343,219556454,219556020,219554474,219553574,219552868,219552536,219552112,219551529,219550742	219571289,219568324,219567969,219567575,219567126,219565514,219563627,219562674,219559497,219558459,219558110,219557618,219556723,219556292,219554740,219553686,219553024,219552697,219552216,219551798,219550842	Gene ID= ENSG00000124006.14 TPM= 38.06 Transcript Type= protein_coding
chr2	219550756	219571241	219550756	219571241	-	ENST00000373876.5@OBSL1	ENST00000373876.5	protein_coding	219570221,219568055,219567718,219567273,219566830,219565242,219563355,219562402,219559225,219558184,219557823,219556454,219556020,219554474,219553574,219552868,219552536,219552112,219551529,219550756	219571241,219568324,219567969,219567575,219567126,219565514,219563627,219562674,219559497,219558459,219558110,219556723,219556292,219554740,219553686,219553024,219552697,219552216,219551798,219550842	Gene ID= ENSG00000124006.14 TPM= 29.56 Transcript Type= protein_coding
chr2	219561722	219571289	219561722	219571289	-	ENST00000373873.8@OBSL1	ENST00000373873.8	protein_coding	219570221,219568055,219567718,219567273,219566830,219565242,219563355,219562402,219561722	219571289,219568324,219567969,219567575,219567126,219565514,219563627,219562674,219562008	Gene ID= ENSG00000124006.14 TPM= 80.19 Transcript Type= protein_coding
chr2	219597860	219616451	219597860	219616451	+	ENST00000456909.5@STK11IP	ENST00000456909.5	protein_coding	219597860,219598094,219601235,219601641,219601988,219602468,219602705,219605608,219605956,219606195,219606476,219606712,219607053,219608047,219608583,219609097,219609363,219611604,219611955,219613128,219613752,219614161,219614476,219615094,219616044	219597923,219598180,219601440,219601715,219602083,219602575,219602776,219605734,219606059,219606290,219606517,219606858,219607137,219608430,219608788,219609213,219609540,219611834,219612058,219613225,219613930,219614242,219614546,219615341,219616451	Gene ID= ENSG00000144589.21 TPM= 15.93 Transcript Type= protein_coding
chr2	219627755	219641971	219627755	219641971	+	transcript7588.chr2.nic@SLC4A3	transcript7588.chr2.nic	protein_coding	219627755,219628405,219629144,219629580,219630153,219631968,219632262,219632874,219633274,219633880,219634420,219635271,219635673,219636302,219636680,219637581,219638164,219638703,219639482,219640430,219640789,219641651	219628043,219628570,219629421,219629695,219630352,219632116,219632442,219633009,219633457,219633979,219634604,219635496,219635891,219636450,219636874,219637811,219638253,219638869,219639735,219640599,219640962,219641971	Gene ID= ENSG00000114923.16 TPM= 76.21 Transcript Type= NA
chr2	219631040	219641971	219631040	219641971	+	transcript7611.chr2.nic@SLC4A3	transcript7611.chr2.nic	protein_coding	219631040,219631968,219632262,219632874,219633274,219633880,219634420,219635271,219635673,219636302,219636680,219637581,219638164,219638703,219639482,219640430,219640789,219641651	219631455,219632116,219632442,219633009,219633457,219633979,219634604,219635496,219635891,219636450,219636874,219637811,219638253,219638869,219639735,219640599,219640962,219641971	Gene ID= ENSG00000114923.16 TPM= 208.24 Transcript Type= NA
chr2	219631091	219641971	219631091	219641971	+	transcript7617.chr2.nic@SLC4A3	transcript7617.chr2.nic	protein_coding	219631091,219631968,219632262,219632874,219633274,219633866,219634420,219635271,219635673,219636302,219636680,219637581,219638164,219638703,219640430,219640789,219641651	219631455,219632116,219632442,219633009,219633457,219633979,219634604,219635496,219635891,219636450,219636874,219637811,219638253,219639735,219640599,219640962,219641971	Gene ID= ENSG00000114923.16 TPM= 55.95 Transcript Type= NA
chr2	219627565	219641980	219627565	219641980	+	ENST00000273063.10@SLC4A3	ENST00000273063.10	protein_coding	219627565,219627960,219628405,219629144,219629580,219630072,219631968,219632262,219632874,219633274,219633880,219634420,219635271,219635673,219636302,219636680,219637581,219638164,219638703,219639482,219640430,219640789,219641651	219627745,219628043,219628570,219629421,219629695,219630352,219632116,219632442,219633009,219633457,219633979,219634604,219635496,219635891,219636450,219636874,219637811,219638253,219638869,219639735,219640599,219640962,219641980	Gene ID= ENSG00000114923.16 TPM= 49.34 Transcript Type= protein_coding
chr2	219627661	219641980	219627661	219641980	+	ENST00000317151.7@SLC4A3	ENST00000317151.7	protein_coding	219627661,219627960,219628405,219629144,219629580,219630153,219631968,219632262,219632874,219633274,219633880,219634420,219635271,219635673,219636302,219636680,219637581,219638164,219638703,219639482,219640430,219640789,219641651	219627745,219628043,219628570,219629421,219629695,219630352,219632116,219632442,219633009,219633457,219633979,219634604,219635496,219635891,219636450,219636874,219637811,219638253,219638869,219639735,219640599,219640962,219641980	Gene ID= ENSG00000114923.16 TPM= 66.16 Transcript Type= protein_coding
chr2	219641810	219645636	219641810	219645636	+	transcript7658.chr2.nnic@NA	transcript7658.chr2.nnic	NA	219641810	219645636	Gene ID= novel_gene_chr2_7659 TPM= 6.37 Transcript Type= NA
chr2	221572506	221574454	221572506	221574454	+	ENST00000609776.1@AC079834.2	ENST00000609776.1	antisense_RNA	221572506	221574454	Gene ID= ENSG00000272944.1 TPM= 11.68 Transcript Type= antisense_RNA
chr2	222571745	222656097	222571745	222656097	-	transcript7666.chr2.nnic@FARSB	transcript7666.chr2.nnic	protein_coding	222656016,222648740,222646801,222642851,222640862,222639580,222634391,222633199,222631604,222630113,222628837,222624714,222624272,222623650,222619645,222613811,222599928,222571745	222656097,222648795,222646996,222643005,222640931,222639695,222634541,222633307,222631674,222630174,222628888,222624775,222624479,222623730,222619737,222613928,222600083,222572022	Gene ID= ENSG00000116120.9 TPM= 4.78 Transcript Type= NA
chr2	222570536	222656337	222570536	222656337	-	ENST00000281828.6@FARSB	ENST00000281828.6	protein_coding	222656016,222648740,222642851,222640862,222639580,222634391,222633199,222631604,222630113,222628837,222624714,222624272,222623650,222619645,222613811,222599928,222570536	222656337,222648795,222643005,222640931,222639695,222634541,222633307,222631674,222630174,222628888,222624775,222624479,222623730,222619737,222613928,222600083,222572022	Gene ID= ENSG00000116120.9 TPM= 1.59 Transcript Type= protein_coding
chr2	222860934	222944639	222860934	222944639	+	ENST00000357430.7@ACSL3	ENST00000357430.7	protein_coding	222860934,222887830,222900674,222908733,222916319,222918046,222919064,222921280,222922708,222923078,222924456,222927017,222928862,222930621,222933166,222934530,222941497	222861258,222887888,222900780,222909150,222916496,222918155,222919202,222921430,222922831,222923149,222924595,222927189,222928936,222930812,222933280,222934687,222944639	Gene ID= ENSG00000123983.13 TPM= 5.31 Transcript Type= protein_coding
chr2	222860942	222942222	222860942	222942222	+	ENST00000392066.7@ACSL3	ENST00000392066.7	protein_coding	222860942,222887830,222908733,222916319,222918046,222919064,222921280,222922708,222923078,222924456,222927017,222928862,222930621,222933166,222934530,222941497	222861258,222887888,222909150,222916496,222918155,222919202,222921430,222922831,222923149,222924595,222927189,222928936,222930812,222933280,222934687,222942222	Gene ID= ENSG00000123983.13 TPM= 12.75 Transcript Type= protein_coding
chr2	223051814	223055637	223051814	223055637	+	ENST00000281830.3@KCNE4	ENST00000281830.3	protein_coding	223051814,223052808	223052274,223055637	Gene ID= ENSG00000152049.6 TPM= 3.19 Transcript Type= protein_coding
chr2	223875347	223945387	223875347	223945387	-	ENST00000233055.8@WDFY1	ENST00000233055.8	protein_coding	223945148,223917943,223912253,223905947,223901183,223898958,223895504,223894234,223884648,223881942,223880124,223875347	223945387,223918010,223912326,223906001,223901333,223899070,223895630,223894339,223884749,223882072,223880232,223878730	Gene ID= ENSG00000085449.14 TPM= 14.87 Transcript Type= protein_coding
chr2	223957404	223967714	223957404	223967714	+	ENST00000258383.3@MRPL44	ENST00000258383.3	protein_coding	223957404,223959534,223963756,223966863	223957651,223960002,223963934,223967714	Gene ID= ENSG00000135900.3 TPM= 53.11 Transcript Type= protein_coding
chr2	223975153	224039289	223975153	224039289	-	transcript7699.chr2.nnic@SERPINE2	transcript7699.chr2.nnic	protein_coding	224039099,223998115,223991803,223984752,223982681,223980311,223977544,223975153	224039289,223998342,223992000,223984950,223982781,223980397,223977627,223975904	Gene ID= ENSG00000135919.12 TPM= 7.97 Transcript Type= NA
chr2	223975112	224039288	223975112	224039288	-	ENST00000409304.5@SERPINE2	ENST00000409304.5	protein_coding	224039099,224001642,223998115,223991803,223984752,223982681,223980311,223977544,223975112	224039288,224001922,223998342,223992000,223984950,223982781,223980397,223977627,223975904	Gene ID= ENSG00000135919.12 TPM= 72.76 Transcript Type= protein_coding
chr2	223985302	223987755	223985302	223987755	-	transcript7704.chr2.nnic@NA	transcript7704.chr2.nnic	NA	223985302	223987755	Gene ID= novel_gene_chr2_7705 TPM= 2.12 Transcript Type= NA
chr2	224034391	224036350	224034391	224036350	+	transcript7702.chr2.nnic@NA	transcript7702.chr2.nnic	NA	224034391	224036350	Gene ID= novel_gene_chr2_7703 TPM= 4.25 Transcript Type= NA
chr2	224378698	224402034	224378698	224402034	-	ENST00000409685.3@FAM124B	ENST00000409685.3	protein_coding	224401037,224378698	224402034,224380208	Gene ID= ENSG00000124019.9 TPM= 1.06 Transcript Type= protein_coding
chr2	226731317	226799759	226731317	226799759	-	ENST00000305123.5@IRS1	ENST00000305123.5	protein_coding	226794989,226731317	226799759,226736250	Gene ID= ENSG00000169047.5 TPM= 18.06 Transcript Type= protein_coding
chr2	226793168	226795884	226793168	226795884	-	transcript7728.chr2.nnic@NA	transcript7728.chr2.nnic	NA	226793168	226795884	Gene ID= novel_gene_chr2_7729 TPM= 2.12 Transcript Type= NA
chr2	226835936	226999215	226835936	226999215	+	ENST00000341329.7@RHBDD1	ENST00000341329.7	protein_coding	226835936,226864604,226867186,226906793,226908822,226914208,226995431	226836087,226865126,226867318,226906881,226908878,226914351,226999215	Gene ID= ENSG00000144468.16 TPM= 6.37 Transcript Type= protein_coding
chr2	227325268	227357831	227325268	227357831	+	transcript7744.chr2.nic@MFF	transcript7744.chr2.nic	protein_coding	227325268,227328678,227330626,227332419,227340292,227342745,227347226,227352514,227355677,227356986	227325427,227328789,227330846,227332588,227340380,227342819,227347384,227352573,227355761,227357831	Gene ID= ENSG00000168958.19 TPM= 12.13 Transcript Type= NA
chr2	227325169	227357834	227325169	227357834	+	ENST00000304593.13@MFF	ENST00000304593.13	protein_coding	227325169,227328678,227330626,227332419,227340292,227347226,227352514,227355677,227356986	227325427,227328789,227330846,227332588,227340380,227347384,227352573,227355761,227357834	Gene ID= ENSG00000168958.19 TPM= 13.19 Transcript Type= protein_coding
chr2	227325244	227357831	227325244	227357831	+	transcript7755.chr2.nic@MFF	transcript7755.chr2.nic	protein_coding	227325244,227330626,227332419,227340292,227342745,227347226,227352514,227355677,227356986	227325427,227330846,227332588,227340380,227342819,227347384,227352573,227355761,227357831	Gene ID= ENSG00000168958.19 TPM= 6.61 Transcript Type= NA
chr2	227325244	227357831	227325244	227357831	+	transcript7762.chr2.nic@MFF	transcript7762.chr2.nic	protein_coding	227325244,227330626,227332419,227340292,227347226,227352514,227355677,227356986	227325427,227330846,227332588,227340380,227347384,227352573,227355761,227357831	Gene ID= ENSG00000168958.19 TPM= 14.04 Transcript Type= NA
chr2	227325244	227357831	227325244	227357831	+	transcript7771.chr2.nic@MFF	transcript7771.chr2.nic	protein_coding	227325244,227330626,227332419,227340292,227352514,227355677,227356986	227325427,227330846,227332588,227340380,227352573,227355761,227357831	Gene ID= ENSG00000168958.19 TPM= 7.67 Transcript Type= NA
chr2	227325221	227357254	227325221	227357254	+	ENST00000476924.5@MFF	ENST00000476924.5	protein_coding	227325221,227332419,227340292,227355677,227356986	227325427,227332588,227340380,227355761,227357254	Gene ID= ENSG00000168958.19 TPM= 2.12 Transcript Type= processed_transcript
chr2	227325276	227357812	227325276	227357812	+	ENST00000349901.11@MFF	ENST00000349901.11	protein_coding	227325276,227328678,227330626,227332419,227340292,227352514,227355677,227356986	227325427,227328789,227330846,227332588,227340380,227352573,227355761,227357812	Gene ID= ENSG00000168958.19 TPM= 7.65 Transcript Type= protein_coding
chr2	227325259	227357799	227325259	227357799	+	ENST00000409565.5@MFF	ENST00000409565.5	protein_coding	227325259,227330626,227332419,227340292,227355677,227356986	227325427,227330846,227332588,227340380,227355761,227357799	Gene ID= ENSG00000168958.19 TPM= 2.12 Transcript Type= protein_coding
chr2	227325250	227357215	227325250	227357215	+	ENST00000354503.10@MFF	ENST00000354503.10	protein_coding	227325250,227328678,227330626,227332419,227340292,227355677,227356986	227325427,227328789,227330846,227332588,227340380,227355761,227357215	Gene ID= ENSG00000168958.19 TPM= 1.27 Transcript Type= protein_coding
chr2	227325271	227357131	227325271	227357131	+	ENST00000524634.5@MFF	ENST00000524634.5	protein_coding	227325271,227332419,227340292,227355677,227356986	227325427,227332588,227340380,227355761,227357131	Gene ID= ENSG00000168958.19 TPM= 2.12 Transcript Type= protein_coding
chr2	227325239	227357833	227325239	227357833	+	ENST00000353339.7@MFF	ENST00000353339.7	protein_coding	227325239,227328678,227329606,227330626,227332419,227340292,227342745,227347226,227352514,227355677,227356986	227325427,227328789,227329783,227330846,227332588,227340380,227342819,227347384,227352573,227355761,227357833	Gene ID= ENSG00000168958.19 TPM= 2.36 Transcript Type= protein_coding
chr2	227472126	227555122	227472126	227555122	+	transcript7782.chr2.nic@AGFG1	transcript7782.chr2.nic	protein_coding	227472126,227491547,227519948,227523763,227524762,227531091,227532138,227533549,227534845,227536625,227536901,227550059,227551959,227553704,227554436	227472588,227491640,227520063,227523925,227524915,227531210,227532209,227533758,227535025,227536704,227536993,227550106,227552117,227553795,227555122	Gene ID= ENSG00000173744.17 TPM= 8.5 Transcript Type= NA
chr2	227472126	227555122	227472126	227555122	+	transcript7785.chr2.nic@AGFG1	transcript7785.chr2.nic	protein_coding	227472126,227491547,227519948,227523763,227524762,227531091,227533549,227534845,227536625,227536901,227550059,227551959,227553704,227554436	227472588,227491640,227520063,227523925,227524915,227531210,227533758,227535025,227536704,227536993,227550106,227552117,227553795,227555122	Gene ID= ENSG00000173744.17 TPM= 2.12 Transcript Type= NA
chr2	227979950	228181645	227979950	228181645	-	ENST00000392056.7@SPHKAP	ENST00000392056.7	protein_coding	228181567,228131980,228108832,228027484,228025394,228021711,228016406,227995509,227993534,227991274,227991000,227979950	228181645,228132085,228108939,228027543,228025528,228021966,228020156,227995694,227993620,227991326,227991184,227981860	Gene ID= ENSG00000153820.12 TPM= 23.37 Transcript Type= protein_coding
chr2	228158328	228162163	228158328	228162163	-	transcript7797.chr2.nnic@NA	transcript7797.chr2.nnic	NA	228158328	228162163	Gene ID= novel_gene_chr2_7798 TPM= 2.12 Transcript Type= NA
chr2	229023995	229271285	229023995	229271285	-	ENST00000392055.7@PID1	ENST00000392055.7	protein_coding	229271014,229155818,229023995	229271285,229155964,229026108	Gene ID= ENSG00000153823.18 TPM= 1.06 Transcript Type= protein_coding
chr2	229357629	229714558	229357629	229714558	-	ENST00000341772.4@DNER	ENST00000341772.4	protein_coding	229714148,229591580,229588394,229585858,229546947,229512783,229477140,229447316,229418108,229407232,229388265,229366873,229357629	229714558,229591888,229588488,229586024,229547092,229512936,229477253,229447540,229418230,229407345,229388396,229367119,229358651	Gene ID= ENSG00000187957.7 TPM= 3.19 Transcript Type= protein_coding
chr2	229767212	229922054	229767212	229922054	-	transcript7812.chr2.nic@TRIP12	transcript7812.chr2.nic	protein_coding	229921880,229879982,229858919,229858772,229840822,229836848,229830756,229829193,229818364,229815273,229815099,229814233,229813870,229811136,229810880,229808252,229807708,229805730,229803999,229803571,229802252,229799283,229798875,229797690,229796591,229795179,229792973,229792153,229791866,229791124,229789611,229788798,229787505,229785757,229778876,229778433,229777315,229774097,229771519,229769231,229768616,229767212	229922054,229880128,229859574,229858831,229840927,229836984,229830839,229829288,229818512,229815308,229815194,229814325,229814031,229811204,229811045,229808369,229807864,229805883,229804227,229803689,229802459,229799383,229799049,229797831,229796782,229795330,229793145,229792226,229792065,229791251,229789762,229788940,229787661,229785855,229778990,229778587,229777479,229774261,229771632,229769325,229768719,229767750	Gene ID= ENSG00000153827.13 TPM= 10.97 Transcript Type= NA
chr2	229767212	229921740	229767212	229921740	-	transcript7813.chr2.nic@TRIP12	transcript7813.chr2.nic	protein_coding	229921564,229879982,229860406,229858772,229840822,229836848,229830756,229829193,229818364,229815273,229815099,229814233,229813870,229811136,229810880,229808252,229807708,229805730,229803999,229803571,229802252,229799283,229798875,229797690,229796591,229795179,229792973,229792153,229791866,229791124,229789611,229788798,229787505,229785757,229778876,229778433,229777315,229774097,229771519,229769231,229768616,229767212	229921740,229880128,229860531,229859574,229840927,229836984,229830839,229829288,229818512,229815308,229815194,229814325,229814031,229811204,229811045,229808369,229807864,229805883,229804227,229803689,229802459,229799383,229799049,229797831,229796782,229795330,229793145,229792226,229792065,229791251,229789762,229788940,229787661,229785855,229778990,229778587,229777479,229774261,229771632,229769325,229768719,229767750	Gene ID= ENSG00000153827.13 TPM= 10.97 Transcript Type= NA
chr2	229767212	229922054	229767212	229922054	-	transcript7818.chr2.nic@TRIP12	transcript7818.chr2.nic	protein_coding	229921880,229879982,229858772,229840822,229836848,229830756,229829193,229818364,229815273,229815099,229814233,229813870,229811136,229810880,229808252,229807708,229805730,229803999,229803571,229802252,229799283,229798875,229797690,229796591,229795179,229792973,229792153,229791866,229791124,229789611,229788798,229787505,229785757,229778876,229778433,229777315,229774097,229771519,229769231,229768616,229767212	229922054,229880128,229859574,229840927,229836984,229830839,229829288,229818512,229815308,229815194,229814325,229814031,229811204,229811045,229808369,229807864,229805883,229804227,229803689,229802459,229799383,229799049,229797831,229796782,229795330,229793145,229792226,229792065,229791251,229789762,229788940,229787661,229785855,229778990,229778587,229777479,229774261,229771632,229769325,229768719,229767750	Gene ID= ENSG00000153827.13 TPM= 13.1 Transcript Type= NA
chr2	229814996	229816339	229814996	229816339	+	transcript7825.chr2.nnic@NA	transcript7825.chr2.nnic	NA	229814996	229816339	Gene ID= novel_gene_chr2_7826 TPM= 3.19 Transcript Type= NA
chr2	229922496	230013109	229922496	230013109	+	ENST00000283946.7@FBXO36	ENST00000283946.7	protein_coding	229922496,229976241,229996751,230010696	229922609,229976349,229996923,230013109	Gene ID= ENSG00000153832.11 TPM= 2.12 Transcript Type= protein_coding
chr2	229922506	229923473	229922506	229923473	+	transcript7830.chr2.nnic@NA	transcript7830.chr2.nnic	NA	229922506	229923473	Gene ID= novel_gene_chr2_7831 TPM= 2.12 Transcript Type= NA
chr2	230168919	230173422	230168919	230173422	-	transcript7832.chr2.nnic@NA	transcript7832.chr2.nnic	NA	230168919	230173422	Gene ID= novel_gene_chr2_7833 TPM= 2.12 Transcript Type= NA
chr2	230176475	230220112	230176475	230220112	-	ENST00000258382.9@SP110	ENST00000258382.9	protein_coding	230219874,230216781,230214950,230212761,230212347,230211470,230209931,230207991,230202579,230200885,230185994,230183572,230178157,230177538,230176475	230220112,230216928,230215118,230213027,230212430,230211553,230210008,230208059,230202728,230200965,230186143,230183640,230178255,230177680,230176724	Gene ID= ENSG00000135899.17 TPM= 2.12 Transcript Type= protein_coding
chr2	230176475	230219981	230176475	230219981	-	transcript7835.chr2.nnic@SP110	transcript7835.chr2.nnic	protein_coding	230219874,230216781,230214950,230212761,230212347,230211470,230209931,230207991,230200885,230185994,230183572,230178157,230177538,230176475	230219981,230216928,230215118,230213027,230212430,230211553,230210008,230208059,230200965,230186143,230183640,230178255,230177680,230176724	Gene ID= ENSG00000135899.17 TPM= 2.12 Transcript Type= NA
chr2	230416185	230508146	230416185	230508146	+	transcript7850.chr2.nnic@SP100	transcript7850.chr2.nnic	protein_coding	230416185,230417591,230442937,230444178,230446819,230449088,230461262,230462435,230464067,230466301,230467120,230469043,230470015,230473324,230474394,230494416,230498461,230503066,230504186,230506303,230507993	230416328,230417665,230443099,230444346,230446902,230449150,230461414,230462518,230464150,230466354,230467215,230469096,230470098,230473440,230474447,230494460,230498535,230503110,230504290,230506445,230508146	Gene ID= ENSG00000067066.16 TPM= 3.19 Transcript Type= NA
chr2	230415942	230516527	230415942	230516527	+	ENST00000264052.9@SP100	ENST00000264052.9	protein_coding	230415942,230417591,230442937,230444178,230446819,230449088,230449561,230450172,230461262,230462435,230464067,230466301,230467120,230469043,230470015,230473324,230474394,230494416,230498461,230503066,230504186,230506303,230507993,230511125,230515095	230416328,230417665,230443099,230444346,230446902,230449150,230449710,230450255,230461414,230462518,230464150,230466354,230467215,230469096,230470098,230473440,230474447,230494460,230498535,230503110,230504290,230506445,230508031,230511166,230516527	Gene ID= ENSG00000067066.16 TPM= 2.12 Transcript Type= protein_coding
chr2	230416156	230470534	230416156	230470534	+	ENST00000427101.6@SP100	ENST00000427101.6	protein_coding	230416156,230442937,230444178,230446819,230449088,230449561,230450172,230461262,230462435,230464067,230466301,230467120,230469043,230470015	230416328,230443099,230444346,230446902,230449150,230449710,230450255,230461414,230462518,230464150,230466354,230467206,230469096,230470534	Gene ID= ENSG00000067066.16 TPM= 5.31 Transcript Type= protein_coding
chr2	230416177	230470530	230416177	230470530	+	transcript7873.chr2.nnic@SP100	transcript7873.chr2.nnic	protein_coding	230416177,230442937,230444178,230446819,230449088,230449561,230461262,230462435,230464067,230466301,230467120,230469043,230470015	230416328,230443099,230444346,230446902,230449150,230449710,230461414,230462518,230464150,230466354,230467215,230469096,230470530	Gene ID= ENSG00000067066.16 TPM= 6.02 Transcript Type= NA
chr2	230416247	230470517	230416247	230470517	+	ENST00000409341.5@SP100	ENST00000409341.5	protein_coding	230416247,230417591,230442937,230444178,230446819,230449088,230449561,230450172,230461262,230462435,230464067,230466301,230467120,230469043,230470015	230416328,230417665,230443099,230444346,230446902,230449150,230449710,230450255,230461414,230462518,230464150,230466354,230467215,230469096,230470517	Gene ID= ENSG00000067066.16 TPM= 26.55 Transcript Type= protein_coding
chr2	230712845	230821075	230712845	230821075	+	ENST00000258418.9@CAB39	ENST00000258418.9	protein_coding	230712845,230759959,230790872,230793213,230798729,230810263,230814049,230817754,230818516	230713230,230760115,230791036,230793331,230798897,230810322,230814114,230817897,230821075	Gene ID= ENSG00000135932.10 TPM= 147.64 Transcript Type= protein_coding
chr2	230864948	230879247	230864948	230879247	+	ENST00000335005.10@ITM2C	ENST00000335005.10	protein_coding	230864948,230875620,230876857,230877400,230878008	230865145,230875808,230876967,230877550,230879247	Gene ID= ENSG00000135916.15 TPM= 8.15 Transcript Type= protein_coding
chr2	230864900	230879247	230864900	230879247	+	ENST00000326427.10@ITM2C	ENST00000326427.10	protein_coding	230864900,230873417,230875620,230876857,230877400,230878008	230865145,230873557,230875808,230876967,230877550,230879247	Gene ID= ENSG00000135916.15 TPM= 51.7 Transcript Type= protein_coding
chr2	230864980	230879248	230864980	230879248	+	ENST00000326407.10@ITM2C	ENST00000326407.10	protein_coding	230864980,230873417,230875620,230877400,230878008	230865145,230873557,230875808,230877550,230879248	Gene ID= ENSG00000135916.15 TPM= 7.08 Transcript Type= protein_coding
chr2	231056867	231165235	231056867	231165235	+	ENST00000431051.5@PSMD1	ENST00000431051.5	protein_coding	231056867,231061267,231062248,231066906,231070025,231072189,231075511,231077034,231078659,231079536,231080141,231082883,231083567,231085019,231087117,231138736,231146240,231153564,231161340,231163635,231165200	231057041,231061310,231062321,231067111,231070168,231072415,231075571,231077162,231078747,231079614,231080314,231082994,231083763,231085114,231087181,231138850,231146356,231153666,231161509,231163727,231165235	Gene ID= ENSG00000173692.12 TPM= 4.25 Transcript Type= nonsense_mediated_decay
chr2	231056864	231172827	231056864	231172827	+	ENST00000308696.10@PSMD1	ENST00000308696.10	protein_coding	231056864,231061267,231062248,231062506,231066906,231070025,231072189,231075511,231077034,231078659,231079536,231080141,231082883,231083567,231085019,231087117,231138736,231146240,231153564,231161340,231163635,231165200,231165871,231170566,231172535	231057041,231061310,231062321,231062675,231067111,231070168,231072415,231075571,231077162,231078747,231079614,231080314,231082994,231083763,231085114,231087181,231138850,231146356,231153666,231161509,231163727,231165286,231166017,231170721,231172827	Gene ID= ENSG00000173692.12 TPM= 2.12 Transcript Type= protein_coding
chr2	231108230	231125118	231108230	231125118	-	ENST00000258400.3@HTR2B	ENST00000258400.3	protein_coding	231124972,231123413,231113729,231108230	231125118,231124130,231113929,231109409	Gene ID= ENSG00000135914.5 TPM= 2.12 Transcript Type= protein_coding
chr2	231198546	231345202	231198546	231345202	+	ENST00000349938.8@ARMC9	ENST00000349938.8	protein_coding	231198546,231206198,231208127,231214831,231216638,231222728,231226774,231235224,231239943,231256586,231258991,231262306,231270982,231272955,231276636,231278382,231282059,231291353,231296198,231331793,231344975	231198698,231206289,231208252,231215001,231216793,231222820,231226798,231235381,231240041,231256620,231259102,231262398,231271072,231273078,231276775,231278458,231282133,231291443,231296253,231331897,231345202	Gene ID= ENSG00000135931.17 TPM= 6.9 Transcript Type= protein_coding
chr2	231198696	231345202	231198696	231345202	+	transcript7912.chr2.nic@ARMC9	transcript7912.chr2.nic	protein_coding	231198696,231206198,231208127,231214831,231216638,231222728,231226774,231235224,231239943,231256586,231258991,231262306,231270982,231272955,231276636,231278382,231282059,231291353,231296198,231331793,231344975	231198941,231206289,231208252,231215001,231216793,231222820,231226798,231235381,231240041,231256620,231259102,231262398,231271072,231273078,231276775,231278458,231282133,231291443,231296253,231331897,231345202	Gene ID= ENSG00000135931.17 TPM= 2.66 Transcript Type= NA
chr2	231395543	231401164	231395543	231401164	+	ENST00000287590.5@B3GNT7	ENST00000287590.5	protein_coding	231395543,231397731	231395814,231401164	Gene ID= ENSG00000156966.6 TPM= 7.44 Transcript Type= protein_coding
chr2	231453531	231464594	231453531	231464594	-	ENST00000322723.8@NCL	ENST00000322723.8	protein_coding	231464336,231463200,231461540,231460669,231460478,231460152,231459001,231458266,231457643,231457001,231456631,231456010,231455401,231453531	231464594,231463316,231462017,231460866,231460564,231460293,231459125,231458389,231457800,231457124,231456764,231456136,231455624,231455267	Gene ID= ENSG00000115053.15 TPM= 189.06 Transcript Type= protein_coding
chr2	231603737	231604755	231603737	231604755	-	transcript7930.chr2.nnic@NA	transcript7930.chr2.nnic	NA	231603737	231604755	Gene ID= novel_gene_chr2_7931 TPM= 2.12 Transcript Type= NA
chr2	231710472	231713541	231710472	231713541	+	transcript7936.chr2.nic@PTMA	transcript7936.chr2.nic	protein_coding	231710472,231711348,231711890,231712443,231712804	231710676,231711419,231711983,231712516,231713541	Gene ID= ENSG00000187514.16 TPM= 15.22 Transcript Type= NA
chr2	231708536	231713289	231708536	231713289	+	ENST00000409683.5@PTMA	ENST00000409683.5	protein_coding	231708536,231711348,231711890,231712452,231712804	231708751,231711419,231711983,231712516,231713289	Gene ID= ENSG00000187514.16 TPM= 8.5 Transcript Type= protein_coding
chr2	231708516	231713536	231708516	231713536	+	ENST00000341369.11@PTMA	ENST00000341369.11	protein_coding	231708516,231711348,231711887,231712443,231712804	231708751,231711419,231711983,231712516,231713536	Gene ID= ENSG00000187514.16 TPM= 40.71 Transcript Type= protein_coding
chr2	231708530	231713506	231708530	231713506	+	ENST00000481928.1@PTMA	ENST00000481928.1	protein_coding	231708530,231711348,231712443,231712804	231708751,231711983,231712516,231713506	Gene ID= ENSG00000187514.16 TPM= 1.06 Transcript Type= retained_intron
chr2	231708527	231713539	231708527	231713539	+	transcript7940.chr2.nnic@NA	transcript7940.chr2.nnic	NA	231708527	231713539	Gene ID= novel_gene_chr2_7941 TPM= 3.19 Transcript Type= NA
chr2	231732425	231781309	231732425	231781309	-	ENST00000287600.8@PDE6D	ENST00000287600.8	protein_coding	231781065,231739100,231738013,231737187,231732425	231781309,231739188,231738138,231737292,231733033	Gene ID= ENSG00000156973.13 TPM= 37.18 Transcript Type= protein_coding
chr2	231786403	231808722	231786403	231808722	+	transcript7946.chr2.nnic@COPS7B	transcript7946.chr2.nnic	protein_coding	231786403,231788555,231791733,231794246,231796106,231798859,231807487	231786538,231788732,231791808,231794351,231796308,231798964,231808722	Gene ID= ENSG00000144524.17 TPM= 3.19 Transcript Type= NA
chr2	231786445	231808723	231786445	231808723	+	ENST00000410017.5@COPS7B	ENST00000410017.5	protein_coding	231786445,231788555,231791733,231794263,231796106,231798859,231801140,231807487	231786538,231788732,231791808,231794351,231796308,231798964,231801207,231808723	Gene ID= ENSG00000144524.17 TPM= 1.06 Transcript Type= protein_coding
chr2	231786414	231809253	231786414	231809253	+	ENST00000350033.7@COPS7B	ENST00000350033.7	protein_coding	231786414,231788555,231791733,231794263,231796106,231798859,231807487	231786538,231788732,231791808,231794351,231796308,231798964,231809253	Gene ID= ENSG00000144524.17 TPM= 1.06 Transcript Type= protein_coding
chr2	231961583	232337197	231961583	232337197	+	ENST00000325385.11@DIS3L2	ENST00000325385.11	protein_coding	231961583,232014835,232015514,232024277,232029979,232087487,232130619,232136472,232163459,232210326,232238533,232249239,232263207,232300040,232329813,232330690,232333840,232334369,232334631,232335773,232336469	231961765,232014979,232015671,232024330,232030080,232087721,232130719,232136719,232163632,232210405,232238645,232249346,232263440,232300119,232329996,232330776,232333987,232334499,232334735,232335874,232337197	Gene ID= ENSG00000144535.19 TPM= 2.12 Transcript Type= protein_coding
chr2	232338377	232340936	232338377	232340936	+	transcript7952.chr2.nnic@NA	transcript7952.chr2.nnic	NA	232338377	232340936	Gene ID= novel_gene_chr2_7953 TPM= 2.12 Transcript Type= NA
chr2	232479827	232487828	232479827	232487828	-	ENST00000304546.5@ECEL1	ENST00000304546.5	protein_coding	232487719,232485868,232485199,232484981,232484801,232484472,232484001,232483416,232483105,232482851,232482550,232482418,232481782,232481506,232481091,232480718,232480399,232479827	232487828,232486754,232485267,232485091,232484893,232484596,232484223,232483514,232483179,232482954,232482608,232482469,232481849,232481630,232481156,232480813,232480475,232480252	Gene ID= ENSG00000171551.11 TPM= 1.06 Transcript Type= protein_coding
chr2	232548072	232550553	232548072	232550553	-	transcript7956.chr2.nnic@NA	transcript7956.chr2.nnic	NA	232548072	232550553	Gene ID= novel_gene_chr2_7957 TPM= 3.19 Transcript Type= NA
chr2	232550673	232583642	232550673	232583642	+	transcript7959.chr2.nnic@EIF4E2	transcript7959.chr2.nnic	protein_coding	232550673,232556416,232557884,232558822,232564247,232566829,232567078,232574263,232580904	232550744,232556530,232558018,232558900,232564351,232566981,232567214,232574341,232583642	Gene ID= ENSG00000135930.13 TPM= 9.56 Transcript Type= NA
chr2	232550052	232569210	232550052	232569210	+	ENST00000258416.7@EIF4E2	ENST00000258416.7	protein_coding	232550052,232556416,232557884,232564247,232566829,232567078,232568945	232550744,232556530,232558018,232564351,232566981,232567214,232569210	Gene ID= ENSG00000135930.13 TPM= 10.62 Transcript Type= protein_coding
chr2	232550683	232583642	232550683	232583642	+	ENST00000409514.5@EIF4E2	ENST00000409514.5	protein_coding	232550683,232556416,232557884,232564247,232566829,232567078,232574263,232580904	232550744,232556530,232558018,232564351,232566981,232567214,232574341,232583642	Gene ID= ENSG00000135930.13 TPM= 22.31 Transcript Type= protein_coding
chr2	232550683	232583644	232550683	232583644	+	ENST00000409098.5@EIF4E2	ENST00000409098.5	protein_coding	232550683,232556416,232557884,232564247,232566829,232567078,232580904	232550744,232556530,232558018,232564351,232566981,232567214,232583644	Gene ID= ENSG00000135930.13 TPM= 11.68 Transcript Type= protein_coding
chr2	232697310	232858608	232697310	232858608	+	ENST00000409480.5@GIGYF2	ENST00000409480.5	protein_coding	232697310,232700585,232703424,232735155,232747615,232748987,232756223,232760480,232761396,232776412,232787150,232790698,232791008,232791258,232794748,232796062,232806491,232809720,232811244,232812391,232815637,232816871,232819827,232832857,232839849,232844046,232844369,232845732,232847348,232850262,232856793	232697392,232700654,232703489,232735238,232747744,232749082,232756334,232760591,232761436,232776477,232787329,232790915,232791170,232791446,232794944,232796221,232806657,232809811,232811351,232812491,232815737,232817032,232819985,232833093,232839971,232844255,232844574,232845886,232847571,232850409,232858608	Gene ID= ENSG00000204120.14 TPM= 2.04 Transcript Type= protein_coding
chr2	232697320	232858608	232697320	232858608	+	transcript7985.chr2.nic@GIGYF2	transcript7985.chr2.nic	protein_coding	232697320,232700585,232703424,232735155,232747615,232748987,232756223,232760480,232761396,232787150,232790698,232791008,232791258,232794748,232796062,232806491,232809720,232811244,232812391,232815637,232816871,232819827,232832857,232839849,232844046,232844369,232845732,232847348,232850262,232856793	232697392,232700654,232703489,232735238,232747744,232749082,232756334,232760591,232761436,232787329,232790915,232791170,232791446,232794944,232796221,232806657,232809811,232811351,232812491,232815737,232817032,232819985,232833093,232839971,232844255,232844574,232845886,232847571,232850409,232858608	Gene ID= ENSG00000204120.14 TPM= 3.1 Transcript Type= NA
chr2	232697307	232858612	232697307	232858612	+	ENST00000373563.8@GIGYF2	ENST00000373563.8	protein_coding	232697307,232703424,232735155,232747615,232748987,232756223,232760480,232761396,232787150,232790698,232791008,232791258,232794748,232796062,232806491,232809720,232811244,232812391,232815637,232816871,232819827,232832857,232839849,232844046,232844369,232845732,232847348,232850262,232856793	232697392,232703489,232735238,232747744,232749082,232756334,232760591,232761436,232787329,232790915,232791170,232791446,232794944,232796221,232806657,232809811,232811351,232812491,232815737,232817032,232819985,232833093,232839971,232844255,232844574,232845886,232847571,232850409,232858612	Gene ID= ENSG00000204120.14 TPM= 6.82 Transcript Type= protein_coding
chr2	232697317	232844544	232697317	232844544	+	transcript7991.chr2.nic@GIGYF2	transcript7991.chr2.nic	protein_coding	232697317,232703424,232734417,232735155,232747615,232748987,232756223,232760480,232761396,232787150,232790698,232791008,232791258,232794748,232796062,232806491,232809720,232811244,232812391,232815637,232816871,232819827,232832857,232839849,232844046,232844369	232697392,232703489,232734486,232735238,232747744,232749082,232756334,232760591,232761436,232787329,232790915,232791170,232791446,232794944,232796221,232806657,232809811,232811351,232812491,232815737,232817032,232819985,232833093,232839971,232844255,232844544	Gene ID= ENSG00000204120.14 TPM= 2.12 Transcript Type= NA
chr2	232697331	232858627	232697331	232858627	+	ENST00000409547.5@GIGYF2	ENST00000409547.5	protein_coding	232697331,232700585,232703424,232734417,232735155,232747615,232748987,232756223,232760480,232761396,232787150,232790698,232791008,232791258,232794748,232796062,232806491,232809720,232811244,232812391,232815637,232816871,232819827,232832857,232839849,232844046,232844369,232845732,232847348,232850262,232856793	232697392,232700654,232703489,232734486,232735238,232747744,232749082,232756334,232760591,232761436,232787329,232790915,232791170,232791446,232794944,232796221,232806657,232809811,232811351,232812491,232815737,232817032,232819985,232833093,232839971,232844255,232844574,232845886,232847571,232850409,232858627	Gene ID= ENSG00000204120.14 TPM= 3.98 Transcript Type= protein_coding
chr2	232697352	232819982	232697352	232819982	+	ENST00000440945.5@GIGYF2	ENST00000440945.5	protein_coding	232697352,232703424,232735155,232747615,232748987,232756223,232760480,232761396,232787150,232790716,232791008,232791258,232794748,232796062,232806491,232809720,232811244,232812391,232815637,232816871,232819827	232697392,232703489,232735238,232747744,232749082,232756334,232760591,232761436,232787329,232790915,232791170,232791446,232794944,232796221,232806657,232809811,232811351,232812491,232815737,232817032,232819982	Gene ID= ENSG00000204120.14 TPM= 2.12 Transcript Type= protein_coding
chr2	232762228	232766762	232762228	232766762	-	transcript8004.chr2.nnic@NA	transcript8004.chr2.nnic	NA	232762228	232766762	Gene ID= novel_gene_chr2_8005 TPM= 2.12 Transcript Type= NA
chr2	232878686	233013272	232878686	233013272	-	ENST00000264051.7@NGEF	ENST00000264051.7	protein_coding	233013068,232974623,232970214,232927044,232920284,232894756,232892898,232891358,232888033,232885280,232883981,232883311,232882186,232881146,232878686	233013272,232974964,232970328,232927186,232920585,232894916,232893050,232891487,232888107,232885369,232884144,232883466,232882265,232881250,232879679	Gene ID= ENSG00000066248.14 TPM= 2.12 Transcript Type= protein_coding
chr2	233204438	233207902	233204438	233207902	+	transcript8009.chr2.nic@INPP5D	transcript8009.chr2.nic	protein_coding	233204438,233206706	233204717,233207902	Gene ID= ENSG00000168918.13 TPM= 2.12 Transcript Type= NA
chr2	233251571	233295674	233251571	233295674	+	ENST00000392017.8@ATG16L1	ENST00000392017.8	protein_coding	233251571,233256102,233263130,233263992,233264892,233270002,233272966,233273721,233274676,233277568,233281105,233282682,233289854,233290248,233292128,233292387,233293256,233294257	233251942,233256195,233263235,233264065,233265143,233270067,233273052,233273777,233274778,233277673,233281175,233282753,233289974,233290353,233292277,233292434,233293357,233295674	Gene ID= ENSG00000085978.21 TPM= 6.37 Transcript Type= protein_coding
chr2	233251682	233295666	233251682	233295666	+	ENST00000479942.5@ATG16L1	ENST00000479942.5	protein_coding	233251682,233256102,233263130,233263992,233264892,233270002,233272966,233273721,233274676,233277568,233281105,233282682,233289854,233292128,233292387,233293256,233294257	233251942,233256195,233263235,233264065,233265143,233270067,233273052,233273777,233274778,233277673,233281175,233282753,233290353,233292277,233292434,233293357,233295666	Gene ID= ENSG00000085978.21 TPM= 3.19 Transcript Type= retained_intron
chr2	233251714	233295674	233251714	233295674	+	ENST00000392018.1@ATG16L1	ENST00000392018.1	protein_coding	233251714,233256102,233263130,233263992,233264892,233270002,233272966,233273721,233273991,233274676,233277568,233281105,233282682,233289854,233290248,233292128,233292387,233293256,233294257	233251942,233256195,233263235,233264065,233265143,233270067,233273052,233273777,233274041,233274778,233277673,233281175,233282753,233289974,233290353,233292277,233292434,233293357,233295674	Gene ID= ENSG00000085978.21 TPM= 8.5 Transcript Type= protein_coding
chr2	233251706	233295674	233251706	233295674	+	ENST00000392020.8@ATG16L1	ENST00000392020.8	protein_coding	233251706,233256102,233263130,233263992,233264892,233270002,233272966,233274676,233277568,233281105,233282682,233289854,233290248,233292128,233292387,233293256,233294257	233251942,233256195,233263235,233264065,233265143,233270067,233273052,233274778,233277673,233281175,233282753,233289974,233290353,233292277,233292434,233293357,233295674	Gene ID= ENSG00000085978.21 TPM= 2.12 Transcript Type= protein_coding
chr2	233354507	233472100	233354507	233472100	+	ENST00000264057.6@DGKD	ENST00000264057.6	protein_coding	233354507,233388257,233390403,233434380,233434769,233435818,233436316,233437377,233438217,233441887,233445623,233446712,233448087,233448276,233449103,233449982,233450922,233451964,233454763,233456899,233457221,233458284,233459757,233460194,233462348,233462643,233464164,233467086,233468423,233469371	233354674,233388367,233390483,233434484,233434901,233435924,233436441,233437479,233438379,233441995,233445762,233446796,233448181,233448375,233449376,233450131,233451050,233452060,233454873,233456995,233457328,233458397,233459891,233460345,233462459,233462735,233464283,233467203,233468553,233472100	Gene ID= ENSG00000077044.10 TPM= 57.8 Transcript Type= protein_coding
chr2	233419198	233472096	233419198	233472096	+	transcript8021.chr2.nic@DGKD	transcript8021.chr2.nic	protein_coding	233419198,233434380,233434769,233435818,233436316,233437377,233438217,233441887,233445623,233446712,233448087,233448276,233449103,233449982,233450922,233451964,233454763,233456899,233457221,233458284,233459757,233460194,233462348,233462643,233464164,233467086,233468423,233469371	233419421,233434484,233434901,233435924,233436441,233437479,233438379,233441995,233445762,233446796,233448181,233448375,233449376,233450131,233451050,233452060,233454873,233456995,233457328,233458397,233459891,233460345,233462459,233462735,233464283,233467203,233468553,233472096	Gene ID= ENSG00000077044.10 TPM= 53.55 Transcript Type= NA
chr2	233451572	233453380	233451572	233453380	-	transcript8036.chr2.nnic@NA	transcript8036.chr2.nnic	NA	233451572	233453380	Gene ID= novel_gene_chr2_8037 TPM= 3.19 Transcript Type= NA
chr2	233468248	233470053	233468248	233470053	+	transcript8034.chr2.nnic@NA	transcript8034.chr2.nnic	NA	233468248	233470053	Gene ID= novel_gene_chr2_8035 TPM= 5.31 Transcript Type= NA
chr2	233475526	233566782	233475526	233566782	-	ENST00000251722.10@USP40	ENST00000251722.10	protein_coding	233566684,233565356,233562736,233559811,233556855,233554380,233551376,233549101,233542268,233540662,233533479,233529431,233527407,233525478,233524492,233523170,233520991,233519614,233512569,233511709,233510049,233499879,233498548,233496758,233493425,233491167,233489365,233488239,233485767,233485531,233481203,233475526	233566782,233565573,233562803,233559924,233557019,233554526,233551519,233549229,233542363,233540766,233533779,233529512,233527578,233525562,233524562,233523489,233521114,233519671,233512622,233511797,233510135,233499915,233498612,233496832,233493551,233491261,233489483,233488304,233485977,233485626,233481297,233477503	Gene ID= ENSG00000085982.13 TPM= 2.12 Transcript Type= protein_coding
chr2	234495134	234497058	234495134	234497058	-	transcript8041.chr2.nnic@NA	transcript8041.chr2.nnic	NA	234495134	234497058	Gene ID= novel_gene_chr2_8042 TPM= 9.56 Transcript Type= NA
chr2	235591074	235593981	235591074	235593981	+	transcript8046.chr2.nnic@NA	transcript8046.chr2.nnic	NA	235591074	235593981	Gene ID= novel_gene_chr2_8047 TPM= 2.12 Transcript Type= NA
chr2	235669604	236126554	235669604	236126554	+	ENST00000409538.5@AGAP1	ENST00000409538.5	protein_coding	235669604,235709179,235717557,235740963,235744698,235750354,235797759,235799367,235807239,235883345,235908738,235968462,236036561,236040751,236049059,236120192,236123919	235671057,235709237,235717644,235741048,235744839,235750488,235797886,235799522,235807331,235883449,235908906,235968623,236036715,236040841,236049281,236120447,236126554	Gene ID= ENSG00000157985.18 TPM= 4.25 Transcript Type= protein_coding
chr2	236193464	236243047	236193464	236243047	-	transcript8053.chr2.nic@ASB18	transcript8053.chr2.nic	protein_coding	236241280,236237689,236214362,236196272,236193464	236243047,236237956,236214866,236196385,236195057	Gene ID= ENSG00000182177.13 TPM= 7.97 Transcript Type= NA
chr2	236193464	236264417	236193464	236264417	-	transcript8054.chr2.nic@ASB18	transcript8054.chr2.nic	protein_coding	236264141,236237689,236214362,236196272,236193464	236264417,236237956,236214866,236196385,236195057	Gene ID= ENSG00000182177.13 TPM= 14.34 Transcript Type= NA
chr2	236206192	236208246	236206192	236208246	-	transcript8066.chr2.nnic@NA	transcript8066.chr2.nnic	NA	236206192	236208246	Gene ID= novel_gene_chr2_8067 TPM= 4.25 Transcript Type= NA
chr2	236226989	236228460	236226989	236228460	-	transcript8070.chr2.nnic@NA	transcript8070.chr2.nnic	NA	236226989	236228460	Gene ID= novel_gene_chr2_8071 TPM= 2.12 Transcript Type= NA
chr2	236231990	236234912	236231990	236234912	-	transcript8074.chr2.nnic@NA	transcript8074.chr2.nnic	NA	236231990	236234912	Gene ID= novel_gene_chr2_8075 TPM= 3.19 Transcript Type= NA
chr2	236233472	236237241	236233472	236237241	-	transcript8072.chr2.nnic@NA	transcript8072.chr2.nnic	NA	236233472	236237241	Gene ID= novel_gene_chr2_8073 TPM= 9.56 Transcript Type= NA
chr2	236256028	236259565	236256028	236259565	-	transcript8076.chr2.nnic@NA	transcript8076.chr2.nnic	NA	236256028	236259565	Gene ID= novel_gene_chr2_8077 TPM= 2.12 Transcript Type= NA
chr2	236260150	236264417	236260150	236264417	-	transcript8064.chr2.nnic@NA	transcript8064.chr2.nnic	NA	236260150	236264417	Gene ID= novel_gene_chr2_8065 TPM= 11.68 Transcript Type= NA
chr2	236567798	236569251	236567798	236569251	+	transcript8079.chr2.nnic@ACKR3	transcript8079.chr2.nnic	protein_coding	236567798,236568106,236568686	236567841,236568601,236569251	Gene ID= ENSG00000144476.5 TPM= 2.66 Transcript Type= NA
chr2	236567703	236569261	236567703	236569261	+	transcript8083.chr2.nnic@ACKR3	transcript8083.chr2.nnic	protein_coding	236567703,236568106	236567841,236569261	Gene ID= ENSG00000144476.5 TPM= 12.21 Transcript Type= NA
chr2	236569641	236582358	236569641	236582358	+	ENST00000272928.3@ACKR3	ENST00000272928.3	protein_coding	236569641,236580440	236569924,236582358	Gene ID= ENSG00000144476.5 TPM= 28.68 Transcript Type= protein_coding
chr2	236578430	236582351	236578430	236582351	+	transcript8086.chr2.nnic@NA	transcript8086.chr2.nnic	NA	236578430	236582351	Gene ID= novel_gene_chr2_8087 TPM= 2.12 Transcript Type= NA
chr2	237085312	237100466	237085312	237100466	+	ENST00000354371.6@COPS8	ENST00000354371.6	protein_coding	237085312,237087127,237088605,237089862,237094090,237095822,237096822,237097663	237086042,237087197,237088653,237089994,237094197,237095884,237096869,237100466	Gene ID= ENSG00000198612.10 TPM= 13.81 Transcript Type= protein_coding
chr2	237085887	237087967	237085887	237087967	+	transcript8096.chr2.nnic@NA	transcript8096.chr2.nnic	NA	237085887	237087967	Gene ID= novel_gene_chr2_8097 TPM= 4.25 Transcript Type= NA
chr2	237102608	237104693	237102608	237104693	+	transcript8098.chr2.nnic@NA	transcript8098.chr2.nnic	NA	237102608	237104693	Gene ID= novel_gene_chr2_8099 TPM= 2.12 Transcript Type= NA
chr2	237487168	237555318	237487168	237555318	+	ENST00000264605.7@MLPH	ENST00000264605.7	protein_coding	237487168,237493403,237510574,237510989,237518539,237519910,237525601,237527377,237534564,237540348,237540802,237542567,237546606,237549221,237552337,237553566	237487437,237493536,237510795,237511101,237518648,237520029,237525805,237527516,237534647,237540533,237540957,237542659,237546683,237549278,237552437,237555318	Gene ID= ENSG00000115648.13 TPM= 1.06 Transcript Type= protein_coding
chr2	237487230	237553991	237487230	237553991	+	transcript8104.chr2.nic@MLPH	transcript8104.chr2.nic	protein_coding	237487230,237493403,237510574,237510989,237518539,237519910,237525601,237527377,237534564,237540348,237540802,237542567,237546606,237549221,237552337,237553689	237487437,237493536,237510795,237511101,237518648,237520029,237525805,237527516,237534647,237540533,237540957,237542659,237546683,237549278,237552437,237553991	Gene ID= ENSG00000115648.13 TPM= 2.12 Transcript Type= NA
chr2	237487230	237553994	237487230	237553994	+	transcript8107.chr2.nic@MLPH	transcript8107.chr2.nic	protein_coding	237487230,237493403,237510574,237510989,237518539,237525601,237527377,237534564,237540348,237540802,237542567,237546606,237549221,237552337,237553566	237487437,237493536,237510795,237511101,237518648,237525805,237527516,237534647,237540533,237540957,237542659,237546683,237549278,237552437,237553994	Gene ID= ENSG00000115648.13 TPM= 2.12 Transcript Type= NA
chr2	237487251	237553994	237487251	237553994	+	ENST00000338530.8@MLPH	ENST00000338530.8	protein_coding	237487251,237493403,237510574,237510989,237518539,237519910,237525601,237527377,237540348,237540802,237542567,237546606,237549221,237552337,237553566	237487437,237493536,237510795,237511101,237518648,237520029,237525805,237527516,237540533,237540957,237542659,237546683,237549278,237552437,237553994	Gene ID= ENSG00000115648.13 TPM= 2.12 Transcript Type= protein_coding
chr2	237692115	237780315	237692115	237780315	+	transcript8126.chr2.nic@LRRFIP1	transcript8126.chr2.nic	protein_coding	237692115,237708544,237714259,237717762,237719523,237720772,237723548,237727876,237733774,237735268,237739232,237748364,237749199,237751200,237753309,237756095,237757456,237758729,237760064,237769943,237772081,237772866,237774358,237779422	237692521,237708630,237714276,237717809,237719567,237720822,237723586,237727935,237733818,237735333,237739309,237748399,237749324,237751271,237753479,237756187,237757548,237758821,237760205,237769992,237772198,237772945,237774462,237780315	Gene ID= ENSG00000124831.18 TPM= 14.25 Transcript Type= NA
chr2	237627554	237780315	237627554	237780315	+	transcript8134.chr2.nic@LRRFIP1	transcript8134.chr2.nic	protein_coding	237627554,237708544,237714259,237717762,237719523,237720772,237727876,237733774,237735268,237739232,237748364,237749199,237751200,237753309,237756095,237757456,237758729,237760064,237769943,237772081,237772866,237774358,237779422	237627740,237708630,237714276,237717809,237719567,237720822,237727935,237733818,237735333,237739309,237748399,237749324,237751271,237753479,237756187,237757548,237758821,237760205,237769992,237772198,237772945,237774462,237780315	Gene ID= ENSG00000124831.18 TPM= 16.38 Transcript Type= NA
chr2	237627554	237780315	237627554	237780315	+	transcript8140.chr2.nic@LRRFIP1	transcript8140.chr2.nic	protein_coding	237627554,237708544,237714259,237717762,237719523,237720772,237733774,237735268,237739232,237748364,237749199,237751200,237753309,237756095,237757456,237758729,237760064,237769943,237772081,237772866,237774358,237779422	237627740,237708630,237714276,237717809,237719567,237720822,237733818,237735333,237739309,237748399,237749324,237751271,237753479,237756187,237757548,237758821,237760205,237769992,237772198,237772945,237774462,237780315	Gene ID= ENSG00000124831.18 TPM= 18.5 Transcript Type= NA
chr2	237627554	237763440	237627554	237763440	+	transcript8157.chr2.nic@LRRFIP1	transcript8157.chr2.nic	protein_coding	237627554,237708544,237714259,237717762,237719523,237720772,237723548,237727876,237733774,237735268,237739232,237748364,237749199,237751200,237753309,237756095,237757456,237758729,237760064,237762603	237627740,237708630,237714276,237717809,237719567,237720822,237723586,237727935,237733818,237735333,237739309,237748399,237749324,237751271,237753479,237756187,237757548,237758821,237760205,237763440	Gene ID= ENSG00000124831.18 TPM= 45.62 Transcript Type= NA
chr2	237627554	237763440	237627554	237763440	+	transcript8175.chr2.nic@LRRFIP1	transcript8175.chr2.nic	protein_coding	237627554,237708544,237714259,237717762,237719523,237720772,237733774,237735268,237739232,237748364,237749199,237751200,237753309,237756095,237757456,237758729,237760064,237762603	237627740,237708630,237714276,237717809,237719567,237720822,237733818,237735333,237739309,237748399,237749324,237751271,237753479,237756187,237757548,237758821,237760205,237763440	Gene ID= ENSG00000124831.18 TPM= 11.63 Transcript Type= NA
chr2	237692115	237780315	237692115	237780315	+	transcript8202.chr2.nic@LRRFIP1	transcript8202.chr2.nic	protein_coding	237692115,237708544,237748364,237749199,237753309,237756095,237760064,237769943,237772081,237772866,237774358,237779422	237692521,237708630,237748399,237749324,237753479,237756187,237760205,237769992,237772198,237772945,237774462,237780315	Gene ID= ENSG00000124831.18 TPM= 14.25 Transcript Type= NA
chr2	237627623	237646146	237627623	237646146	+	transcript8234.chr2.nnic@LRRFIP1	transcript8234.chr2.nnic	protein_coding	237627623,237645986	237627740,237646146	Gene ID= ENSG00000124831.18 TPM= 3.19 Transcript Type= NA
chr2	237627576	237780315	237627576	237780315	+	ENST00000308482.13@LRRFIP1	ENST00000308482.13	protein_coding	237627576,237708544,237714259,237717762,237719523,237720772,237723548,237727876,237733774,237735268,237739232,237748364,237749199,237751200,237753309,237756095,237757456,237758729,237760064,237769943,237772081,237772866,237774358,237779422	237627740,237708630,237714276,237717809,237719567,237720822,237723586,237727935,237733818,237735333,237739309,237748399,237749324,237751271,237753479,237756187,237757548,237758821,237760205,237769992,237772198,237772945,237774462,237780315	Gene ID= ENSG00000124831.18 TPM= 127.91 Transcript Type= protein_coding
chr2	237692145	237765279	237692145	237765279	+	ENST00000289175.10@LRRFIP1	ENST00000289175.10	protein_coding	237692145,237708544,237748364,237749199,237753309,237756095,237760064,237762603	237692521,237708630,237748399,237749324,237753479,237756187,237760205,237765279	Gene ID= ENSG00000124831.18 TPM= 7.44 Transcript Type= protein_coding
chr2	237785648	237785756	237785648	237785756	+	transcript8242.chr2.nnic@NA	transcript8242.chr2.nnic	NA	237785648	237785756	Gene ID= novel_gene_chr2_8243 TPM= 2.12 Transcript Type= NA
chr2	237786934	237790426	237786934	237790426	+	transcript8244.chr2.nnic@NA	transcript8244.chr2.nnic	NA	237786934	237790426	Gene ID= novel_gene_chr2_8245 TPM= 2.12 Transcript Type= NA
chr2	237859582	237912114	237859582	237912114	+	transcript8248.chr2.nnic@RAMP1	transcript8248.chr2.nnic	protein_coding	237859582,237860070,237877224,237911528	237859727,237860207,237877362,237912114	Gene ID= ENSG00000132329.10 TPM= 9.56 Transcript Type= NA
chr2	237859544	237912114	237859544	237912114	+	ENST00000254661.4@RAMP1	ENST00000254661.4	protein_coding	237859544,237877224,237911528	237859727,237877362,237912114	Gene ID= ENSG00000132329.10 TPM= 252.79 Transcript Type= protein_coding
chr2	237868048	237869787	237868048	237869787	-	transcript8262.chr2.nnic@NA	transcript8262.chr2.nnic	NA	237868048	237869787	Gene ID= novel_gene_chr2_8263 TPM= 10.62 Transcript Type= NA
chr2	237879933	237882207	237879933	237882207	-	transcript8266.chr2.nnic@NA	transcript8266.chr2.nnic	NA	237879933	237882207	Gene ID= novel_gene_chr2_8267 TPM= 2.12 Transcript Type= NA
chr2	237883914	237885864	237883914	237885864	-	transcript8264.chr2.nnic@NA	transcript8264.chr2.nnic	NA	237883914	237885864	Gene ID= novel_gene_chr2_8265 TPM= 39.3 Transcript Type= NA
chr2	237909027	237912103	237909027	237912103	+	transcript8260.chr2.nnic@NA	transcript8260.chr2.nnic	NA	237909027	237912103	Gene ID= novel_gene_chr2_8261 TPM= 2.12 Transcript Type= NA
chr2	237966955	238042595	237966955	238042595	+	ENST00000272930.8@UBE2F	ENST00000272930.8	protein_coding	237966955,237973092,237987963,237994744,238016566,238025342,238030556,238032222,238035878,238041288	237967132,237973225,237987992,237994809,238016633,238025412,238030613,238032254,238035940,238042595	Gene ID= ENSG00000184182.18 TPM= 36.11 Transcript Type= protein_coding
chr2	237967026	238051306	237967026	238051306	+	transcript8276.chr2.nnic@UBE2F	transcript8276.chr2.nnic	protein_coding	237967026,237973092,237987963,237994744,238016566,238025342,238030556,238032222,238035878,238050308	237967132,237973225,237987992,237994809,238016633,238025412,238030613,238032254,238035940,238051306	Gene ID= ENSG00000184182.18 TPM= 4.25 Transcript Type= NA
chr2	237966955	238042782	237966955	238042782	+	ENST00000414443.5@UBE2F	ENST00000414443.5	protein_coding	237966955,237973092,238016566,238025342,238030556,238032222,238035878,238041288	237967132,237973225,238016633,238025412,238030613,238032254,238035940,238042782	Gene ID= ENSG00000184182.18 TPM= 1.06 Transcript Type= protein_coding
chr2	238019656	238021437	238019656	238021437	-	transcript8288.chr2.nnic@NA	transcript8288.chr2.nnic	NA	238019656	238021437	Gene ID= novel_gene_chr2_8289 TPM= 4.25 Transcript Type= NA
chr2	238060889	238099413	238060889	238099413	+	ENST00000254663.10@SCLY	ENST00000254663.10	protein_coding	238060889,238064357,238068065,238069297,238081709,238082045,238083248,238091218,238093861,238094420,238096801,238098202	238061143,238064469,238068165,238069477,238081836,238082209,238083354,238091254,238093944,238094522,238096876,238099413	Gene ID= ENSG00000132330.16 TPM= 10.62 Transcript Type= protein_coding
chr2	238138722	238152947	238138722	238152947	+	ENST00000409223.1@KLHL30	ENST00000409223.1	protein_coding	238138722,238140685,238142799,238144902,238145677,238147834,238149007,238150814	238138758,238141528,238142931,238144988,238145832,238148022,238149152,238152947	Gene ID= ENSG00000168427.8 TPM= 25.49 Transcript Type= protein_coding
chr2	238170402	238203737	238170402	238203737	-	transcript8298.chr2.nic@ILKAP	transcript8298.chr2.nic	protein_coding	238203499,238194782,238194275,238189853,238188131,238185181,238184020,238183653,238182065,238173534,238170943,238170402	238203737,238194870,238194331,238189972,238188257,238185287,238184113,238183740,238182186,238173653,238171024,238170676	Gene ID= ENSG00000132323.8 TPM= 4.96 Transcript Type= NA
chr2	238170401	238203729	238170401	238203729	-	ENST00000254654.7@ILKAP	ENST00000254654.7	protein_coding	238203499,238194805,238194275,238189853,238188131,238185181,238184020,238183653,238182065,238173534,238170943,238170401	238203729,238194870,238194331,238189972,238188257,238185287,238184113,238183740,238182186,238173653,238171024,238170676	Gene ID= ENSG00000132323.8 TPM= 53.82 Transcript Type= protein_coding
chr2	238238267	238240124	238238267	238240124	-	ENST00000272937.9@HES6	ENST00000272937.9	protein_coding	238239825,238239661,238239487,238238267	238240124,238239747,238239568,238239251	Gene ID= ENSG00000144485.10 TPM= 2.12 Transcript Type= protein_coding
chr2	238238270	238240038	238238270	238240038	-	ENST00000409160.7@HES6	ENST00000409160.7	protein_coding	238239825,238239661,238238270	238240038,238239747,238239568	Gene ID= ENSG00000144485.10 TPM= 2.12 Transcript Type= protein_coding
chr2	238264636	238288816	238264636	238288816	-	transcript8313.chr2.nnic@PER2	transcript8313.chr2.nnic	protein_coding	238288644,238277707,238277131,238275743,238273070,238271312,238268923,238268056,238264636	238288816,238277955,238277193,238275897,238273191,238271513,238268974,238268198,238265590	Gene ID= ENSG00000132326.11 TPM= 3.19 Transcript Type= NA
chr2	238248658	238253102	238248658	238253102	-	transcript8314.chr2.nnic@NA	transcript8314.chr2.nnic	NA	238248658	238253102	Gene ID= novel_gene_chr2_8315 TPM= 3.19 Transcript Type= NA
chr2	238320441	238400822	238320441	238400822	+	ENST00000391993.7@TRAF3IP1	ENST00000391993.7	protein_coding	238320441,238325306,238325809,238328686,238328926,238332824,238333960,238347455,238348764,238349325,238352827,238353173,238356004,238397459,238398754	238320785,238325374,238325970,238328829,238329342,238332895,238334035,238347475,238348848,238349408,238352950,238353209,238356080,238397679,238400822	Gene ID= ENSG00000204104.11 TPM= 3.19 Transcript Type= protein_coding
chr2	238320508	238400900	238320508	238400900	+	transcript8326.chr2.nnic@TRAF3IP1	transcript8326.chr2.nnic	protein_coding	238320508,238325306,238325809,238328686,238328926,238347455,238348764,238349325,238352827,238353173,238356004,238397459,238398754	238320785,238325374,238325970,238328829,238329342,238347475,238348848,238349408,238352950,238353209,238356080,238397679,238400900	Gene ID= ENSG00000204104.11 TPM= 8.5 Transcript Type= NA
chr2	238450145	238452250	238450145	238452250	+	ENST00000473306.1@ASB1	ENST00000473306.1	protein_coding	238450145,238451785	238450259,238452250	Gene ID= ENSG00000065802.11 TPM= 3.19 Transcript Type= processed_transcript
chr2	238449821	238450488	238449821	238450488	-	transcript8338.chr2.nnic@NA	transcript8338.chr2.nnic	NA	238449821	238450488	Gene ID= novel_gene_chr2_8339 TPM= 2.12 Transcript Type= NA
chr2	238861029	238862895	238861029	238862895	+	transcript8340.chr2.nnic@NA	transcript8340.chr2.nnic	NA	238861029	238862895	Gene ID= novel_gene_chr2_8341 TPM= 2.12 Transcript Type= NA
chr2	239179757	239184094	239179757	239184094	+	transcript8346.chr2.nnic@NA	transcript8346.chr2.nnic	NA	239179757	239184094	Gene ID= novel_gene_chr2_8347 TPM= 14.87 Transcript Type= NA
chr2	239219464	239222552	239219464	239222552	+	transcript8348.chr2.nnic@NA	transcript8348.chr2.nnic	NA	239219464	239222552	Gene ID= novel_gene_chr2_8349 TPM= 8.5 Transcript Type= NA
chr2	239303598	239306647	239303598	239306647	-	transcript8352.chr2.nnic@NA	transcript8352.chr2.nnic	NA	239303598	239306647	Gene ID= novel_gene_chr2_8353 TPM= 4.25 Transcript Type= NA
chr2	239304294	239309403	239304294	239309403	-	transcript8354.chr2.nnic@NA	transcript8354.chr2.nnic	NA	239304294	239309403	Gene ID= novel_gene_chr2_8355 TPM= 2.12 Transcript Type= NA
chr2	239393811	239396228	239393811	239396228	+	transcript8350.chr2.nnic@NA	transcript8350.chr2.nnic	NA	239393811	239396228	Gene ID= novel_gene_chr2_8351 TPM= 2.12 Transcript Type= NA
chr2	239401748	239402355	239401748	239402355	+	ENST00000428471.1@AC062017.1	ENST00000428471.1	antisense_RNA	239401748,239402075	239401880,239402355	Gene ID= ENSG00000222020.2 TPM= 1.06 Transcript Type= antisense_RNA
chr2	239957372	240025402	239957372	240025402	-	ENST00000252711.6@NDUFA10	ENST00000252711.6	protein_coding	240025227,240022172,240021197,240018553,240014739,240011617,240007316,240005210,239990074,239957372	240025402,240022340,240021412,240018639,240014860,240011696,240007370,240005295,239990182,239961186	Gene ID= ENSG00000130414.11 TPM= 18.53 Transcript Type= protein_coding
chr2	239960739	240025403	239960739	240025403	-	transcript8370.chr2.nnic@NDUFA10	transcript8370.chr2.nnic	protein_coding	240025227,240022172,240021197,240018553,240014739,240011617,240007316,240005210,239960739	240025403,240022340,240021412,240018639,240014860,240011696,240007370,240005295,239961186	Gene ID= ENSG00000130414.11 TPM= 76.95 Transcript Type= NA
chr2	239960741	240025345	239960741	240025345	-	ENST00000620965.4@NDUFA10	ENST00000620965.4	protein_coding	240025245,240025227,240022172,240021197,240018553,240014739,240011617,240007316,240005210,239990074,239960741	240025345,240025243,240022341,240021412,240018639,240014860,240011696,240007370,240005295,239990182,239961186	Gene ID= ENSG00000130414.11 TPM= 569.53 Transcript Type= protein_coding
chr2	239960741	240025323	239960741	240025323	-	ENST00000485344.6@NDUFA10	ENST00000485344.6	protein_coding	240025227,240022172,240021197,240018553,240011617,240007316,240005210,239990074,239960741	240025323,240022340,240021412,240018639,240014860,240007370,240005295,239990182,239961186	Gene ID= ENSG00000130414.11 TPM= 8.98 Transcript Type= retained_intron
chr2	240130826	240136303	240130826	240136303	-	ENST00000607357.1@COPS9	ENST00000607357.1	protein_coding	240136222,240133933,240130826	240136303,240134005,240131088	Gene ID= ENSG00000172428.10 TPM= 72.76 Transcript Type= protein_coding
chr2	240130828	240136176	240130828	240136176	-	ENST00000489698.1@COPS9	ENST00000489698.1	protein_coding	240135871,240133933,240130828	240136176,240134005,240131088	Gene ID= ENSG00000172428.10 TPM= 10.09 Transcript Type= processed_transcript
chr2	240435671	240468078	240435671	240468078	+	ENST00000264039.6@GPC1	ENST00000264039.6	protein_coding	240435671,240459030,240462191,240463347,240464616,240464856,240465077,240465473,240466058	240436084,240459188,240462582,240463512,240464746,240464975,240465210,240465648,240468078	Gene ID= ENSG00000063660.8 TPM= 453.65 Transcript Type= protein_coding
chr2	240560054	240564014	240560054	240564014	+	ENST00000343217.6@DUSP28	ENST00000343217.6	protein_coding	240560054,240561330,240563674	240561077,240561519,240564014	Gene ID= ENSG00000188542.9 TPM= 10.62 Transcript Type= protein_coding
chr2	240560393	240564013	240560393	240564013	+	transcript8409.chr2.nic@DUSP28	transcript8409.chr2.nic	protein_coding	240560393,240561330,240563674	240561077,240562596,240564013	Gene ID= ENSG00000188542.9 TPM= 3.19 Transcript Type= NA
chr2	240560302	240564014	240560302	240564014	+	ENST00000405954.1@DUSP28	ENST00000405954.1	protein_coding	240560302,240561330	240561077,240564014	Gene ID= ENSG00000188542.9 TPM= 9.56 Transcript Type= protein_coding
chr2	240568419	240578727	240568419	240578727	+	transcript8427.chr2.nic@RNPEPL1	transcript8427.chr2.nic	protein_coding	240568419,240572423,240573110,240573775,240574113,240574515,240575030,240575502,240576568,240576848,240577599	240569114,240572563,240573261,240573891,240574348,240574628,240575142,240575610,240576765,240576990,240578727	Gene ID= ENSG00000142327.12 TPM= 35.19 Transcript Type= NA
chr2	240568419	240578727	240568419	240578727	+	transcript8429.chr2.nnic@RNPEPL1	transcript8429.chr2.nnic	protein_coding	240568419,240572423,240573128,240573775,240574113,240574515,240575030,240575502,240576535,240576848,240577599	240569114,240572563,240573261,240573891,240574348,240574628,240575142,240575610,240576765,240576990,240578727	Gene ID= ENSG00000142327.12 TPM= 31.65 Transcript Type= NA
chr2	240568485	240578727	240568485	240578727	+	transcript8432.chr2.nnic@RNPEPL1	transcript8432.chr2.nnic	protein_coding	240568485,240572423,240573110,240573775,240574113,240574515,240575030,240575502,240576535,240576848,240577599	240569078,240572563,240573261,240573891,240574348,240574628,240575142,240575610,240576765,240576990,240578727	Gene ID= ENSG00000142327.12 TPM= 32.53 Transcript Type= NA
chr2	240586716	240599109	240586716	240599109	+	ENST00000391984.6@CAPN10	ENST00000391984.6	protein_coding	240586716,240589343,240590815,240591933,240593906,240594543,240595024,240596319,240596681,240597888,240598352,240598651	240587052,240589474,240591011,240592150,240594047,240594709,240595304,240596521,240596942,240598087,240598397,240599109	Gene ID= ENSG00000142330.19 TPM= 45.67 Transcript Type= protein_coding
chr2	240593146	240599104	240593146	240599104	+	transcript8454.chr2.nnic@NA	transcript8454.chr2.nnic	NA	240593146	240599104	Gene ID= novel_gene_chr2_8455 TPM= 2.12 Transcript Type= NA
chr2	240713764	240820220	240713764	240820220	-	ENST00000320389.11@KIF1A	ENST00000320389.11	protein_coding	240820122,240797647,240789236,240788051,240787251,240786335,240784989,240783739,240783044,240782590,240775851,240774183,240773114,240770971,240769627,240769133,240767266,240766915,240765710,240763166,240763019,240762719,240761229,240760665,240758360,240750429,240747236,240746039,240745738,240745427,240743942,240742929,240741269,240740298,240740058,240737063,240726826,240725271,240723975,240723413,240722456,240721807,240720914,240719774,240719006,240718050,240713764	240820220,240797812,240789312,240788230,240787316,240786513,240785100,240783816,240783109,240782607,240775926,240774261,240773256,240771104,240769706,240769208,240767345,240767021,240765793,240763346,240763091,240762812,240761377,240760843,240758497,240750547,240747321,240746177,240745909,240745517,240744060,240742984,240741377,240740364,240740142,240737168,240726940,240725404,240724036,240723558,240722656,240721884,240721038,240719926,240719198,240718168,240717406	Gene ID= ENSG00000130294.15 TPM= 10.62 Transcript Type= protein_coding
chr2	241087225	241102331	241087225	241102331	-	ENST00000455202.6@MTERF4	ENST00000455202.6	protein_coding	241102253,241097243,241094277,241089980,241087225	241102331,241097427,241094432,241090044,241089365	Gene ID= ENSG00000122085.16 TPM= 4.25 Transcript Type= processed_transcript
chr2	241089041	241102320	241089041	241102320	-	ENST00000476564.5@MTERF4	ENST00000476564.5	protein_coding	241102253,241094277,241089980,241089041	241102320,241094432,241090044,241089365	Gene ID= ENSG00000122085.16 TPM= 1.06 Transcript Type= retained_intron
chr2	241095566	241102332	241095566	241102332	-	ENST00000391980.6@MTERF4	ENST00000391980.6	protein_coding	241102253,241099396,241097243,241095566	241102332,241099894,241097427,241096438	Gene ID= ENSG00000122085.16 TPM= 16.99 Transcript Type= protein_coding
chr2	241150455	241183024	241150455	241183024	+	transcript8468.chr2.nic@PPP1R7	transcript8468.chr2.nic	protein_coding	241150455,241153476,241157807,241158484,241159213,241160332,241163285,241166337,241169781,241182647	241150547,241153604,241157862,241158531,241159343,241160494,241163401,241166441,241169867,241183024	Gene ID= ENSG00000115685.14 TPM= 8.5 Transcript Type= NA
chr2	241150496	241167174	241150496	241167174	+	ENST00000401987.5@PPP1R7	ENST00000401987.5	protein_coding	241150496,241157807,241158484,241159213,241160332,241163285,241166337,241167045	241150547,241157862,241158549,241159343,241160494,241163401,241166441,241167174	Gene ID= ENSG00000115685.14 TPM= 3.72 Transcript Type= protein_coding
chr2	241150480	241167174	241150480	241167174	+	ENST00000406106.7@PPP1R7	ENST00000406106.7	protein_coding	241150480,241153476,241157807,241158484,241159213,241160332,241163285,241166337,241167045	241150547,241153604,241157862,241158549,241159343,241160494,241163401,241166441,241167174	Gene ID= ENSG00000115685.14 TPM= 19.65 Transcript Type= protein_coding
chr2	241229212	241315292	241229212	241315292	-	ENST00000391976.6@HDLBP	ENST00000391976.6	protein_coding	241315102,241268477,241266794,241264448,241262711,241256600,241256184,241255374,241255051,241253393,241252957,241249841,241248244,241248003,241247056,241246752,241242460,241239901,241239602,241238649,241236615,241235490,241235121,241233820,241230759,241230153,241229833,241229212	241315292,241268541,241266906,241264605,241262926,241256806,241256399,241255580,241255158,241253497,241253035,241249980,241248348,241248116,241247142,241246883,241242678,241240122,241239820,241238787,241236769,241235594,241235255,241233963,241230944,241230269,241229961,241229687	Gene ID= ENSG00000115677.16 TPM= 250.49 Transcript Type= protein_coding
chr2	241229212	241315842	241229212	241315842	-	ENST00000310931.8@HDLBP	ENST00000310931.8	protein_coding	241315570,241268477,241266794,241264448,241262711,241256600,241256184,241255374,241255051,241253393,241252957,241249841,241248244,241248003,241247056,241246752,241242460,241239901,241239602,241238649,241236615,241235490,241235121,241233820,241230759,241230153,241229833,241229212	241315842,241268541,241266906,241264605,241262926,241256806,241256399,241255580,241255158,241253497,241253035,241249980,241248348,241248116,241247142,241246883,241242678,241240122,241239820,241238787,241236769,241235594,241235255,241233963,241230944,241230269,241229961,241229687	Gene ID= ENSG00000115677.16 TPM= 59.13 Transcript Type= protein_coding
chr2	241227264	241272886	241227264	241272886	-	ENST00000391975.5@HDLBP	ENST00000391975.5	protein_coding	241272761,241268477,241266794,241264448,241262711,241256600,241256184,241255374,241255051,241253393,241252957,241249841,241248244,241248003,241247056,241246752,241242460,241239901,241239602,241238649,241236615,241235490,241235121,241233820,241230759,241230153,241229833,241227264	241272886,241268541,241266906,241264605,241262926,241256806,241256399,241255580,241255158,241253497,241253035,241249980,241248348,241248116,241247142,241246883,241242678,241240122,241239820,241238787,241236769,241235594,241235255,241233963,241230944,241230269,241229961,241229687	Gene ID= ENSG00000115677.16 TPM= 27.65 Transcript Type= protein_coding
chr2	241243269	241245026	241243269	241245026	+	transcript8565.chr2.nnic@NA	transcript8565.chr2.nnic	NA	241243269	241245026	Gene ID= novel_gene_chr2_8566 TPM= 4.25 Transcript Type= NA
chr2	241315877	241354024	241315877	241354024	+	transcript8519.chr2.nic@SEPT2	transcript8519.chr2.nic	protein_coding	241315877,241317499,241324216,241325993,241335126,241335975,241337382,241337673,241342992,241343752,241346166,241348134,241350073,241351967	241315982,241317599,241324241,241326113,241335212,241336098,241337516,241337790,241343093,241343897,241346249,241348191,241350203,241354024	Gene ID= ENSG00000168385.17 TPM= 29.83 Transcript Type= NA
chr2	241315861	241354024	241315861	241354024	+	ENST00000616972.4@SEPT2	ENST00000616972.4	protein_coding	241315861,241316422,241324216,241325993,241335126,241335975,241337382,241337673,241342992,241343752,241346166,241348134,241350073,241351967	241315982,241316555,241324241,241326113,241335212,241336098,241337516,241337790,241343093,241343897,241346249,241348191,241350203,241354024	Gene ID= ENSG00000168385.17 TPM= 6.82 Transcript Type= protein_coding
chr2	241315100	241354024	241315100	241354024	+	ENST00000391973.6@SEPT2	ENST00000391973.6	protein_coding	241315100,241324216,241325993,241335126,241335975,241337382,241337673,241342992,241343752,241346166,241348134,241350073,241351967	241315610,241324241,241326113,241335212,241336098,241337516,241337790,241343093,241343897,241346249,241348191,241350203,241354024	Gene ID= ENSG00000168385.17 TPM= 11.07 Transcript Type= protein_coding
chr2	241315861	241354027	241315861	241354027	+	ENST00000391971.6@SEPT2	ENST00000391971.6	protein_coding	241315861,241324216,241325993,241335126,241335975,241337382,241337673,241342992,241343752,241346166,241348134,241350073,241351967	241315982,241324241,241326113,241335212,241336098,241337516,241337790,241343093,241343897,241346249,241348191,241350203,241354027	Gene ID= ENSG00000168385.17 TPM= 232.26 Transcript Type= protein_coding
chr2	241315883	241354027	241315883	241354027	+	ENST00000407971.5@SEPT2	ENST00000407971.5	protein_coding	241315883,241325993,241335126,241335975,241337382,241337673,241342992,241343752,241346166,241348134,241350073,241351967	241315982,241326113,241335212,241336098,241337516,241337790,241343093,241343897,241346249,241348191,241350203,241354027	Gene ID= ENSG00000168385.17 TPM= 17.71 Transcript Type= protein_coding
chr2	241315875	241336381	241315875	241336381	+	ENST00000475474.5@SEPT2	ENST00000475474.5	protein_coding	241315875,241324216,241325993,241335126,241335975	241315982,241324241,241326113,241335212,241336381	Gene ID= ENSG00000168385.17 TPM= 2.12 Transcript Type= retained_intron
chr2	241315296	241318130	241315296	241318130	+	transcript8561.chr2.nnic@NA	transcript8561.chr2.nnic	NA	241315296	241318130	Gene ID= novel_gene_chr2_8562 TPM= 9.03 Transcript Type= NA
chr2	241317537	241321399	241317537	241321399	-	transcript8567.chr2.nnic@NA	transcript8567.chr2.nnic	NA	241317537	241321399	Gene ID= novel_gene_chr2_8568 TPM= 10.09 Transcript Type= NA
chr2	241356243	241494841	241356243	241494841	+	ENST00000264042.7@FARP2	ENST00000264042.7	protein_coding	241356243,241373084,241403828,241404799,241407537,241411033,241413307,241417962,241431679,241434158,241434962,241436481,241441304,241456747,241462523,241463335,241463899,241468140,241475857,241483465,241484242,241489962,241491061,241491516,241492929,241493293,241494008	241356388,241373290,241403932,241404841,241407615,241411130,241413421,241418109,241431774,241434321,241435030,241436538,241441556,241456922,241462612,241463468,241463980,241468377,241475987,241483533,241484331,241490044,241491179,241491679,241493036,241493444,241494841	Gene ID= ENSG00000006607.13 TPM= 7.44 Transcript Type= protein_coding
chr2	241356253	241445264	241356253	241445264	+	transcript8573.chr2.nic@FARP2	transcript8573.chr2.nic	protein_coding	241356253,241373084,241403828,241404799,241407537,241411033,241413307,241417962,241431679,241434158,241434962,241436481,241441304	241356388,241373290,241403932,241404841,241407615,241411130,241413421,241418109,241431774,241434321,241435030,241436538,241445264	Gene ID= ENSG00000006607.13 TPM= 4.25 Transcript Type= NA
chr2	241378418	241382061	241378418	241382061	-	transcript8613.chr2.nnic@NA	transcript8613.chr2.nnic	NA	241378418	241382061	Gene ID= novel_gene_chr2_8614 TPM= 4.25 Transcript Type= NA
chr2	241492674	241508692	241492674	241508692	-	ENST00000316586.8@STK25	ENST00000316586.8	protein_coding	241508443,241508006,241501478,241500740,241500173,241499257,241498989,241498639,241498235,241497616,241496398,241492674	241508692,241508135,241501708,241500796,241500281,241499414,241499174,241498784,241498349,241497687,241496534,241495701	Gene ID= ENSG00000115694.14 TPM= 5.84 Transcript Type= protein_coding
chr2	241495017	241508688	241495017	241508688	-	ENST00000403346.7@STK25	ENST00000403346.7	protein_coding	241508505,241508006,241501478,241500740,241500173,241499257,241498989,241498639,241498235,241497616,241496398,241495017	241508688,241508135,241501708,241500796,241500281,241499414,241499174,241498784,241498349,241497687,241496534,241495701	Gene ID= ENSG00000115694.14 TPM= 28.82 Transcript Type= protein_coding
chr2	241494707	241508695	241494707	241508695	-	ENST00000535007.5@STK25	ENST00000535007.5	protein_coding	241508443,241501478,241500740,241500173,241499257,241498989,241498639,241498235,241497616,241496398,241494707	241508695,241501708,241500796,241500281,241499414,241499174,241498784,241498349,241497687,241496534,241495701	Gene ID= ENSG00000115694.14 TPM= 11.68 Transcript Type= protein_coding
chr2	241495022	241508604	241495022	241508604	-	transcript8590.chr2.nic@STK25	transcript8590.chr2.nic	protein_coding	241508443,241508006,241501478,241500740,241499257,241498989,241498639,241498235,241497616,241496398,241495022	241508604,241508135,241501708,241500796,241500281,241499174,241498784,241498349,241497687,241496534,241495701	Gene ID= ENSG00000115694.14 TPM= 11.23 Transcript Type= NA
chr2	241495019	241508362	241495019	241508362	-	ENST00000401869.5@STK25	ENST00000401869.5	protein_coding	241508006,241501478,241500740,241500173,241499257,241498989,241498639,241498235,241497616,241496398,241495019	241508362,241501708,241500796,241500281,241499414,241499174,241498784,241498349,241497687,241496534,241495701	Gene ID= ENSG00000115694.14 TPM= 24.78 Transcript Type= protein_coding
chr2	241558721	241574138	241558721	241574138	+	ENST00000318407.4@BOK	ENST00000318407.4	protein_coding	241558721,241559455,241562348,241570125,241572297	241558993,241559703,241562476,241570288,241574138	Gene ID= ENSG00000176720.5 TPM= 14.87 Transcript Type= protein_coding
chr2	241584427	241637307	241584427	241637307	-	transcript8633.chr2.nic@THAP4	transcript8633.chr2.nic	protein_coding	241636941,241632917,241606314,241602970,241601815,241584427	241637307,241634079,241606473,241603079,241601999,241584725	Gene ID= ENSG00000176946.11 TPM= 8.5 Transcript Type= NA
chr2	241584405	241617501	241584405	241617501	-	ENST00000402136.5@THAP4	ENST00000402136.5	protein_coding	241617412,241606314,241602970,241601896,241584405	241617501,241606473,241603079,241601999,241584725	Gene ID= ENSG00000176946.11 TPM= 18.06 Transcript Type= protein_coding
chr2	241637689	241672631	241637689	241672631	+	transcript8625.chr2.nic@ATG4B	transcript8625.chr2.nic	protein_coding	241637689,241651010,241651264,241653512,241654546,241655271,241659108,241666645,241668143,241668540,241670726,241671312	241637724,241651111,241651335,241653610,241654647,241655343,241659187,241666838,241668221,241668685,241670782,241672631	Gene ID= ENSG00000168397.16 TPM= 5.66 Transcript Type= NA
chr2	241637688	241673857	241637688	241673857	+	transcript8627.chr2.nic@ATG4B	transcript8627.chr2.nic	protein_coding	241637688,241651010,241653512,241654546,241655271,241659108,241666645,241668143,241668540,241670726,241671312,241672191	241637724,241651111,241653610,241654647,241655343,241659187,241666838,241668221,241668685,241670782,241671405,241673857	Gene ID= ENSG00000168397.16 TPM= 18.94 Transcript Type= NA
chr2	241637650	241654011	241637650	241654011	+	transcript8638.chr2.nic@ATG4B	transcript8638.chr2.nic	protein_coding	241637650,241651010,241651264	241637724,241651111,241654011	Gene ID= ENSG00000168397.16 TPM= 2.12 Transcript Type= NA
chr2	241675742	241686991	241675742	241686991	-	ENST00000305784.6@DTYMK	ENST00000305784.6	protein_coding	241686654,241685769,241680229,241678452,241675742	241686991,241685877,241680319,241678649,241676237	Gene ID= ENSG00000168393.12 TPM= 20.71 Transcript Type= protein_coding
chr2	241675747	241686944	241675747	241686944	-	ENST00000400770.6@DTYMK	ENST00000400770.6	protein_coding	241686654,241685769,241678452,241675747	241686944,241685877,241678649,241676237	Gene ID= ENSG00000168393.12 TPM= 7.97 Transcript Type= nonsense_mediated_decay
chr2	241702040	241729478	241702040	241729478	+	ENST00000313552.10@ING5	ENST00000313552.10	protein_coding	241702040,241704653,241709216,241711377,241711978,241722939,241723210,241724989	241702102,241704724,241709382,241711488,241712071,241723074,241723271,241729478	Gene ID= ENSG00000168395.15 TPM= 3.19 Transcript Type= protein_coding
chr2	241687085	241721805	241687085	241721805	+	ENST00000636051.1@ING5	ENST00000636051.1	protein_coding	241687085,241689838,241704653,241709216,241711377,241711978,241719483,241719976	241688062,241690653,241704724,241709382,241711488,241712071,241719612,241721805	Gene ID= ENSG00000168395.15 TPM= 2.12 Transcript Type= protein_coding
chr2	241734605	241768809	241734605	241768809	+	transcript8653.chr2.nic@D2HGDH	transcript8653.chr2.nic	protein_coding	241734605,241735133,241741033,241742435,241743622,241744709,241748865,241749299,241750151,241751246,241755849,241767710	241734695,241735516,241741090,241742574,241743815,241744877,241748942,241749399,241750294,241751388,241756014,241768809	Gene ID= ENSG00000180902.17 TPM= 11.68 Transcript Type= NA
chr2	241734579	241768811	241734579	241768811	+	ENST00000321264.8@D2HGDH	ENST00000321264.8	protein_coding	241734579,241735133,241741033,241742435,241743622,241744709,241750151,241751246,241755849,241767710	241734695,241735516,241741090,241742574,241743815,241744877,241750294,241751388,241756014,241768811	Gene ID= ENSG00000180902.17 TPM= 27.62 Transcript Type= protein_coding
chr2	241747548	241749212	241747548	241749212	-	transcript8661.chr2.nnic@NA	transcript8661.chr2.nnic	NA	241747548	241749212	Gene ID= novel_gene_chr2_8662 TPM= 2.12 Transcript Type= NA
chr2	241849881	241858908	241849881	241858908	-	ENST00000334409.9@PDCD1	ENST00000334409.9	protein_coding	241858763,241852621,241852198,241851949,241849881	241858908,241852980,241852353,241851983,241851297	Gene ID= ENSG00000188389.10 TPM= 2.12 Transcript Type= protein_coding
chr2	241862660	241864041	241862660	241864041	+	transcript8665.chr2.nnic@NA	transcript8665.chr2.nnic	NA	241862660	241864041	Gene ID= novel_gene_chr2_8666 TPM= 3.19 Transcript Type= NA
chr3	3126916	3149023	3126916	3149023	+	ENST00000251607.10@TRNT1	ENST00000251607.10	protein_coding	3126916,3129014,3137260,3140510,3144584,3146430,3147450,3147906	3126990,3129188,3137453,3140648,3144710,3146623,3147703,3149023	Gene ID= ENSG00000072756.16 TPM= 7.44 Transcript Type= protein_coding
chr3	3126919	3145523	3126919	3145523	+	transcript17.chr3.nic@TRNT1	transcript17.chr3.nic	protein_coding	3126919,3129014,3137260,3140510,3144584	3126990,3129188,3137453,3140648,3145523	Gene ID= ENSG00000072756.16 TPM= 3.19 Transcript Type= NA
chr3	3126951	3130679	3126951	3130679	+	ENST00000339437.10@TRNT1	ENST00000339437.10	protein_coding	3126951,3129014,3129919	3126990,3129188,3130679	Gene ID= ENSG00000072756.16 TPM= 3.19 Transcript Type= protein_coding
chr3	3150519	3179707	3150519	3179707	-	transcript7.chr3.nic@CRBN	transcript7.chr3.nic	protein_coding	3179621,3174059,3172776,3167634,3156219,3154747,3153960,3153424,3152456,3150519	3179707,3174261,3172925,3167793,3156281,3154831,3154075,3153488,3152587,3151045	Gene ID= ENSG00000113851.14 TPM= 6.37 Transcript Type= NA
chr3	3144628	3179727	3144628	3179727	-	ENST00000639284.1@CRBN	ENST00000639284.1	protein_coding	3179621,3175163,3174059,3172776,3167634,3156219,3154747,3153960,3153424,3152456,3150883,3144628	3179727,3175269,3174261,3172925,3167793,3156281,3154831,3154075,3153488,3152587,3151045,3145499	Gene ID= ENSG00000113851.14 TPM= 2.12 Transcript Type= protein_coding
chr3	3150011	3179710	3150011	3179710	-	ENST00000432408.6@CRBN	ENST00000432408.6	protein_coding	3179621,3175163,3174059,3172776,3167634,3156219,3154747,3153960,3153424,3152456,3150011	3179710,3175266,3174261,3172925,3167793,3156281,3154831,3154075,3153488,3152587,3151045	Gene ID= ENSG00000113851.14 TPM= 2.12 Transcript Type= protein_coding
chr3	3152152	3155360	3152152	3155360	-	transcript20.chr3.nnic@NA	transcript20.chr3.nnic	NA	3152152	3155360	Gene ID= novel_gene_chr3_21 TPM= 2.12 Transcript Type= NA
chr3	4303337	4317265	4303337	4317265	+	ENST00000425046.1@SETMAR	ENST00000425046.1	protein_coding	4303337,4313647,4316212	4303526,4313761,4317265	Gene ID= ENSG00000170364.12 TPM= 3.19 Transcript Type= nonsense_mediated_decay
chr3	4303304	4317567	4303304	4317567	+	ENST00000358065.4@SETMAR	ENST00000358065.4	protein_coding	4303304,4312898,4316212	4303526,4313761,4317567	Gene ID= ENSG00000170364.12 TPM= 1.06 Transcript Type= protein_coding
chr3	4361146	4467288	4361146	4467288	-	transcript34.chr3.nnic@SUMF1	transcript34.chr3.nnic	protein_coding	4466976,4452876,4449266,4420064,4418010,4417128,4416576,4410865,4376330,4361146	4467288,4453049,4449340,4420146,4418132,4417242,4416659,4410978,4376389,4362254	Gene ID= ENSG00000144455.13 TPM= 2.12 Transcript Type= NA
chr3	4361146	4467281	4361146	4467281	-	ENST00000272902.9@SUMF1	ENST00000272902.9	protein_coding	4466976,4452876,4449266,4420064,4418010,4417128,4410865,4376330,4361146	4467281,4453049,4449340,4420146,4418132,4417242,4410978,4376389,4362254	Gene ID= ENSG00000144455.13 TPM= 38.24 Transcript Type= protein_coding
chr3	4729928	4732422	4729928	4732422	-	transcript45.chr3.nnic@NA	transcript45.chr3.nnic	NA	4729928	4732422	Gene ID= novel_gene_chr3_46 TPM= 3.19 Transcript Type= NA
chr3	4814301	4831390	4814301	4831390	-	ENST00000496600.5@AC018816.1	ENST00000496600.5	antisense_RNA	4831276,4830947,4825746,4814301	4831390,4831018,4825862,4814431	Gene ID= ENSG00000235978.6 TPM= 4.25 Transcript Type= antisense_RNA
chr3	4829955	4831390	4829955	4831390	-	transcript54.chr3.nic@AC018816.1	transcript54.chr3.nic	antisense_RNA	4831276,4829955	4831390,4831018	Gene ID= ENSG00000235978.6 TPM= 3.19 Transcript Type= NA
chr3	4976618	4978327	4976618	4978327	-	transcript55.chr3.nnic@NA	transcript55.chr3.nnic	NA	4976618	4978327	Gene ID= novel_gene_chr3_56 TPM= 2.12 Transcript Type= NA
chr3	4979116	4985323	4979116	4985323	+	ENST00000256495.3@BHLHE40	ENST00000256495.3	protein_coding	4979116,4979962,4980301,4981392,4982836	4979798,4980031,4980408,4981515,4985323	Gene ID= ENSG00000134107.4 TPM= 18.06 Transcript Type= protein_coding
chr3	5122245	5180912	5122245	5180912	+	ENST00000611208.4@ARL8B	ENST00000611208.4	protein_coding	5122245,5170503,5172150,5172647,5174017,5174344,5178664	5122588,5170583,5172223,5172740,5174084,5174414,5180912	Gene ID= ENSG00000134108.12 TPM= 70.1 Transcript Type= protein_coding
chr3	5122292	5179646	5122292	5179646	+	ENST00000455168.5@ARL8B	ENST00000455168.5	protein_coding	5122292,5170503,5172150,5172647,5174017,5174344,5178664	5122588,5170556,5172223,5172740,5174084,5174414,5179646	Gene ID= ENSG00000134108.12 TPM= 2.12 Transcript Type= nonsense_mediated_decay
chr3	5156905	5187329	5156905	5187329	-	ENST00000439325.1@AC026202.2	ENST00000439325.1	antisense_RNA	5186955,5186424,5157762,5156905	5187329,5186511,5157851,5157023	Gene ID= ENSG00000233912.1 TPM= 1.06 Transcript Type= antisense_RNA
chr3	5187673	5219957	5187673	5219957	+	ENST00000256497.8@EDEM1	ENST00000256497.8	protein_coding	5187673,5195209,5199592,5201753,5202966,5205067,5207153,5208093,5210175,5211120,5213319,5215829	5188314,5195281,5199695,5201924,5203149,5205241,5207273,5208263,5210248,5211216,5213522,5219957	Gene ID= ENSG00000134109.10 TPM= 7.44 Transcript Type= protein_coding
chr3	8501855	8568125	8501855	8568125	+	transcript71.chr3.nic@LMCD1	transcript71.chr3.nic	protein_coding	8501855,8514925,8532737,8537185,8548568,8565432,8567440	8501980,8514995,8532825,8537440,8548903,8565647,8568125	Gene ID= ENSG00000071282.11 TPM= 11.68 Transcript Type= NA
chr3	8733800	8746765	8733800	8746765	+	ENST00000343849.2@CAV3	ENST00000343849.2	protein_coding	8733800,8745526	8733990,8746765	Gene ID= ENSG00000182533.6 TPM= 41.42 Transcript Type= protein_coding
chr3	8877076	8963502	8877076	8963502	-	ENST00000264926.6@RAD18	ENST00000264926.6	protein_coding	8963335,8958920,8948509,8947220,8941467,8939554,8935871,8913644,8912312,8902380,8898894,8890389,8877076	8963502,8959001,8948570,8947290,8941804,8939653,8936055,8913720,8912372,8902520,8899047,8890451,8881459	Gene ID= ENSG00000070950.9 TPM= 1.06 Transcript Type= protein_coding
chr3	9058738	9248991	9058738	9248991	-	ENST00000470951.5@SRGAP3	ENST00000470951.5	protein_coding	9248885,9124725,9104680,9080025,9064396,9058738	9248991,9124917,9104842,9080087,9064581,9060359	Gene ID= ENSG00000196220.15 TPM= 1.06 Transcript Type= retained_intron
chr3	9363039	9385702	9363039	9385702	+	transcript92.chr3.nic@THUMPD3	transcript92.chr3.nic	protein_coding	9363039,9365016,9366908,9371060,9374516,9377819,9380503,9383199,9384212,9384524	9363525,9365320,9366985,9371536,9374646,9377888,9380618,9383309,9384335,9385702	Gene ID= ENSG00000134077.15 TPM= 4.25 Transcript Type= NA
chr3	9362842	9385702	9362842	9385702	+	ENST00000452837.6@THUMPD3	ENST00000452837.6	protein_coding	9362842,9365016,9366908,9371060,9374516,9377819,9380503,9383199,9384212,9384524	9363127,9365320,9366985,9371536,9374646,9377888,9380618,9383309,9384335,9385702	Gene ID= ENSG00000134077.15 TPM= 9.56 Transcript Type= protein_coding
chr3	9363052	9386791	9363052	9386791	+	ENST00000345094.7@THUMPD3	ENST00000345094.7	protein_coding	9363052,9365016,9366908,9371060,9374516,9377819,9380503,9383199,9384212,9384524	9363332,9365320,9366985,9371536,9374646,9377888,9380618,9383309,9384335,9386791	Gene ID= ENSG00000134077.15 TPM= 3.19 Transcript Type= protein_coding
chr3	9363056	9385702	9363056	9385702	+	transcript109.chr3.nnic@THUMPD3	transcript109.chr3.nnic	protein_coding	9363056,9365016,9366908,9371060,9374516,9377819,9380503,9383199,9384212,9384524	9363767,9365320,9366985,9371536,9374646,9377888,9380618,9383309,9384335,9385702	Gene ID= ENSG00000134077.15 TPM= 2.12 Transcript Type= NA
chr3	9363098	9384870	9363098	9384870	+	ENST00000515662.6@THUMPD3	ENST00000515662.6	protein_coding	9363098,9365016,9366908,9371060,9374516,9377819,9380503,9383199,9384212,9384524	9363728,9365320,9366985,9371536,9374646,9377888,9380618,9383309,9384335,9384870	Gene ID= ENSG00000134077.15 TPM= 1.06 Transcript Type= protein_coding
chr3	9388849	9397493	9388849	9397493	-	ENST00000522525.5@THUMPD3-AS1	ENST00000522525.5	antisense_RNA	9397424,9391679,9388849	9397493,9391826,9390497	Gene ID= ENSG00000206573.8 TPM= 2.12 Transcript Type= antisense_RNA
chr3	9391312	9397504	9391312	9397504	-	ENST00000469846.2@THUMPD3-AS1	ENST00000469846.2	antisense_RNA	9397424,9395506,9391312	9397504,9395579,9391826	Gene ID= ENSG00000206573.8 TPM= 1.06 Transcript Type= antisense_RNA
chr3	9391274	9396645	9391274	9396645	-	transcript123.chr3.nnic@NA	transcript123.chr3.nnic	NA	9391274	9396645	Gene ID= novel_gene_chr3_124 TPM= 2.12 Transcript Type= NA
chr3	9403072	9406619	9403072	9406619	+	transcript130.chr3.nnic@NA	transcript130.chr3.nnic	NA	9403072	9406619	Gene ID= novel_gene_chr3_131 TPM= 2.12 Transcript Type= NA
chr3	9649433	9702393	9649433	9702393	+	ENST00000353332.9@MTMR14	ENST00000353332.9	protein_coding	9649433,9653621,9662267,9668719,9669432,9671048,9672685,9677317,9677984,9683178,9684585,9684888,9685211,9687821,9688696,9688944,9689964,9701790	9649742,9653769,9662375,9668794,9669492,9671170,9672758,9677387,9678058,9683244,9684670,9684964,9685247,9687891,9688754,9689082,9690143,9702393	Gene ID= ENSG00000163719.19 TPM= 10.89 Transcript Type= protein_coding
chr3	9649444	9702392	9649444	9702392	+	transcript138.chr3.nic@MTMR14	transcript138.chr3.nic	protein_coding	9649444,9653621,9662267,9668719,9669432,9671048,9672685,9677317,9677984,9683178,9684585,9684888,9685211,9687821,9688696,9688944,9697711,9701790	9649742,9653769,9662375,9668794,9669492,9671170,9672758,9677387,9678058,9683244,9684670,9684964,9685247,9687891,9688754,9689082,9697866,9702392	Gene ID= ENSG00000163719.19 TPM= 4.51 Transcript Type= NA
chr3	9649462	9702392	9649462	9702392	+	ENST00000296003.8@MTMR14	ENST00000296003.8	protein_coding	9649462,9653621,9662267,9668719,9669432,9671048,9672685,9677317,9677984,9683178,9684585,9684888,9685211,9687821,9688696,9688944,9689964,9697711,9701790	9649742,9653769,9662375,9668794,9669492,9671170,9672758,9677387,9678058,9683244,9684670,9684964,9685247,9687891,9688754,9689082,9690143,9697866,9702392	Gene ID= ENSG00000163719.19 TPM= 57.62 Transcript Type= protein_coding
chr3	9649512	9702389	9649512	9702389	+	ENST00000351233.9@MTMR14	ENST00000351233.9	protein_coding	9649512,9653621,9662267,9668719,9669432,9671048,9672685,9677317,9677984,9683178,9684585,9684888,9685211,9687821,9688696,9688944,9701790	9649742,9653769,9662375,9668794,9669492,9671170,9672758,9677387,9678058,9683244,9684670,9684964,9685247,9687891,9688754,9689082,9702389	Gene ID= ENSG00000163719.19 TPM= 9.82 Transcript Type= protein_coding
chr3	9749944	9757513	9749944	9757513	+	ENST00000344629.11@OGG1	ENST00000344629.11	protein_coding	9749944,9750945,9751770,9754704,9756471,9756767,9757061	9750423,9751192,9751949,9754885,9756621,9756816,9757513	Gene ID= ENSG00000114026.21 TPM= 3.19 Transcript Type= protein_coding
chr3	9749944	9766737	9749944	9766737	+	ENST00000302036.11@OGG1	ENST00000302036.11	protein_coding	9749944,9750945,9751770,9754704,9756471,9756767,9765809	9750423,9751192,9751949,9754885,9756621,9756816,9766737	Gene ID= ENSG00000114026.21 TPM= 3.19 Transcript Type= protein_coding
chr3	9749944	9766668	9749944	9766668	+	ENST00000349503.9@OGG1	ENST00000349503.9	protein_coding	9749944,9750945,9751770,9754704,9765809	9750423,9751192,9751949,9754885,9766668	Gene ID= ENSG00000114026.21 TPM= 1.06 Transcript Type= protein_coding
chr3	9749944	9757407	9749944	9757407	+	ENST00000302003.11@OGG1	ENST00000302003.11	protein_coding	9749944,9750945,9751770,9754704,9756471,9756767,9757044	9750423,9751192,9751949,9754885,9756621,9756816,9757407	Gene ID= ENSG00000114026.21 TPM= 4.25 Transcript Type= protein_coding
chr3	9749981	9757377	9749981	9757377	+	ENST00000339511.9@OGG1	ENST00000339511.9	protein_coding	9749981,9750945,9751770,9754704,9756471,9756767	9750423,9751192,9751949,9754885,9756621,9757377	Gene ID= ENSG00000114026.21 TPM= 4.25 Transcript Type= protein_coding
chr3	9757342	9769977	9757342	9769977	-	ENST00000256460.7@CAMK1	ENST00000256460.7	protein_coding	9769832,9767667,9765759,9763139,9762914,9761631,9761461,9760656,9759672,9759488,9757729,9757342	9769977,9767781,9765890,9763213,9763052,9761757,9761536,9760768,9759750,9759575,9757846,9757621	Gene ID= ENSG00000134072.10 TPM= 12.75 Transcript Type= protein_coding
chr3	9779860	9792747	9779860	9792747	-	ENST00000301964.6@TADA3	ENST00000301964.6	protein_coding	9792216,9791260,9789713,9789509,9787199,9787006,9785316,9784028,9779860	9792747,9791493,9789963,9789614,9787340,9787109,9785425,9784213,9780549	Gene ID= ENSG00000171148.13 TPM= 58.42 Transcript Type= protein_coding
chr3	9783128	9792736	9783128	9792736	-	ENST00000343450.2@TADA3	ENST00000343450.2	protein_coding	9792216,9791260,9789713,9789509,9787199,9787006,9785316,9783128	9792736,9791493,9789963,9789614,9787340,9787109,9785425,9784213	Gene ID= ENSG00000171148.13 TPM= 2.12 Transcript Type= protein_coding
chr3	9837849	9844016	9837849	9844016	-	ENST00000383820.9@RPUSD3	ENST00000383820.9	protein_coding	9843890,9843465,9842199,9841983,9840698,9840532,9840184,9839032,9837849	9844016,9843601,9842243,9842082,9840805,9840616,9840307,9839171,9838207	Gene ID= ENSG00000156990.14 TPM= 56.29 Transcript Type= protein_coding
chr3	9839901	9844016	9839901	9844016	-	ENST00000484134.5@RPUSD3	ENST00000484134.5	protein_coding	9843890,9843465,9842199,9839901	9844016,9843601,9842243,9842082	Gene ID= ENSG00000156990.14 TPM= 1.06 Transcript Type= retained_intron
chr3	9841257	9844059	9841257	9844059	-	ENST00000433972.1@RPUSD3	ENST00000433972.1	protein_coding	9843890,9843465,9842199,9841257	9844059,9843601,9842243,9842082	Gene ID= ENSG00000156990.14 TPM= 11.68 Transcript Type= protein_coding
chr3	9890554	9894349	9890554	9894349	+	ENST00000307768.4@JAGN1	ENST00000307768.4	protein_coding	9890554,9892915	9890811,9894349	Gene ID= ENSG00000171135.13 TPM= 29.74 Transcript Type= protein_coding
chr3	9917074	9933617	9917074	9933617	+	ENST00000383812.8@IL17RC	ENST00000383812.8	protein_coding	9917074,9917713,9917923,9918335,9918500,9920491,9923881,9924232,9928166,9928305,9928580,9929852,9930028,9930400,9930895,9932608,9932820,9932953	9917420,9917734,9918075,9918409,9918609,9920602,9924020,9924291,9928220,9928486,9928630,9929897,9930149,9930459,9930943,9932703,9932858,9933617	Gene ID= ENSG00000163702.18 TPM= 6.72 Transcript Type= protein_coding
chr3	9917109	9933616	9917109	9933616	+	transcript212.chr3.nic@IL17RC	transcript212.chr3.nic	protein_coding	9917109,9917713,9917923,9918335,9918500,9920491,9923881,9924232,9928166,9928305,9928580,9929852,9930028,9930400,9930895,9932608,9932953	9917420,9917734,9918075,9918409,9918609,9920602,9924020,9924291,9928220,9928486,9928630,9929897,9930149,9930459,9930943,9932703,9933616	Gene ID= ENSG00000163702.18 TPM= 8.85 Transcript Type= NA
chr3	9931491	9933697	9931491	9933697	-	transcript241.chr3.nnic@NA	transcript241.chr3.nnic	NA	9931491	9933697	Gene ID= novel_gene_chr3_242 TPM= 8.85 Transcript Type= NA
chr3	9933798	9945014	9933798	9945014	+	transcript232.chr3.nnic@CRELD1	transcript232.chr3.nnic	protein_coding	9933798,9934420,9934835,9937562,9938015,9940850,9941111,9943077,9943381,9944365	9933920,9934612,9934917,9937672,9938106,9941026,9941206,9943172,9943515,9945014	Gene ID= ENSG00000163703.17 TPM= 4.25 Transcript Type= NA
chr3	9933822	9944994	9933822	9944994	+	ENST00000397170.7@CRELD1	ENST00000397170.7	protein_coding	9933822,9934420,9934835,9937562,9938015,9940850,9941111,9942813,9943077,9943381,9944365	9933852,9934612,9934917,9937672,9938106,9941026,9941206,9942896,9943172,9943515,9944994	Gene ID= ENSG00000163703.17 TPM= 47.8 Transcript Type= protein_coding
chr3	9933845	9944999	9933845	9944999	+	ENST00000452070.5@CRELD1	ENST00000452070.5	protein_coding	9933845,9934420,9934835,9937562,9938015,9940850,9941111,9942813,9943077,9943381,9944365	9933920,9934612,9934917,9937672,9938106,9941026,9941206,9942896,9943172,9943515,9944999	Gene ID= ENSG00000163703.17 TPM= 86.04 Transcript Type= protein_coding
chr3	9933856	9945032	9933856	9945032	+	ENST00000326434.9@CRELD1	ENST00000326434.9	protein_coding	9933856,9934420,9934835,9937562,9938015,9940850,9941111,9942813,9943077,9943381,9943902,9944365	9933920,9934612,9934917,9937672,9938106,9941026,9941206,9942896,9943172,9943515,9944095,9945032	Gene ID= ENSG00000163703.17 TPM= 3.19 Transcript Type= protein_coding
chr3	9933840	9945413	9933840	9945413	+	ENST00000383811.7@CRELD1	ENST00000383811.7	protein_coding	9933840,9934835,9937562,9938015,9940850,9941111,9942813,9943077,9943381,9944365	9934612,9934917,9937672,9938106,9941026,9941206,9942896,9943172,9943515,9945413	Gene ID= ENSG00000163703.17 TPM= 5.31 Transcript Type= protein_coding
chr3	9945542	9952394	9945542	9952394	-	ENST00000412055.5@PRRT3	ENST00000412055.5	protein_coding	9952322,9949101,9948758,9945542	9952394,9950172,9948913,9948001	Gene ID= ENSG00000163704.11 TPM= 2.12 Transcript Type= protein_coding
chr3	9963960	10011178	9963960	10011178	-	transcript245.chr3.nnic@EMC3	transcript245.chr3.nnic	protein_coding	10011023,9977389,9976957,9974384,9973628,9970582,9969719,9963960	10011178,9977446,9977050,9974488,9973709,9970661,9969801,9964197	Gene ID= ENSG00000125037.12 TPM= 5.31 Transcript Type= NA
chr3	9962682	9977137	9962682	9977137	-	transcript247.chr3.nic@EMC3	transcript247.chr3.nic	protein_coding	9976957,9974384,9973628,9970582,9969719,9962682	9977137,9974488,9973709,9970661,9969801,9964197	Gene ID= ENSG00000125037.12 TPM= 5.31 Transcript Type= NA
chr3	10014238	10026357	10014238	10026357	-	ENST00000432401.5@CIDECP	ENST00000432401.5	transcribed_unprocessed_pseudogene	10026041,10023560,10014238	10026357,10023747,10015526	Gene ID= ENSG00000186162.10 TPM= 2.12 Transcript Type= processed_transcript
chr3	10017497	10026365	10017497	10026365	-	ENST00000424691.1@CIDECP	ENST00000424691.1	transcribed_unprocessed_pseudogene	10026041,10023560,10017497	10026365,10023747,10018071	Gene ID= ENSG00000186162.10 TPM= 14.87 Transcript Type= processed_transcript
chr3	10017490	10023747	10017490	10023747	-	ENST00000433871.5@CIDECP	ENST00000433871.5	transcribed_unprocessed_pseudogene	10023560,10017490	10023747,10018071	Gene ID= ENSG00000186162.10 TPM= 10.62 Transcript Type= transcribed_unprocessed_pseudogene
chr3	10022927	10026326	10022927	10026326	-	ENST00000445082.1@CIDECP	ENST00000445082.1	transcribed_unprocessed_pseudogene	10026041,10022927	10026326,10023747	Gene ID= ENSG00000186162.10 TPM= 1.06 Transcript Type= processed_transcript
chr3	10115592	10127190	10115592	10127190	+	ENST00000530758.1@BRK1	ENST00000530758.1	protein_coding	10115592,10125626,10126269	10115819,10125708,10127190	Gene ID= ENSG00000254999.3 TPM= 131.18 Transcript Type= protein_coding
chr3	10141008	10152220	10141008	10152220	+	ENST00000256474.2@VHL	ENST00000256474.2	protein_coding	10141008,10146514,10149787	10142187,10146636,10152220	Gene ID= ENSG00000134086.7 TPM= 2.12 Transcript Type= protein_coding
chr3	10164865	10243743	10164865	10243743	+	ENST00000256458.4@IRAK2	ENST00000256458.4	protein_coding	10164865,10177838,10200369,10209589,10213207,10213484,10216934,10219680,10222636,10226371,10234459,10238748,10242116	10165048,10178020,10200515,10209692,10213401,10213548,10217048,10219789,10222831,10226433,10234659,10239039,10243743	Gene ID= ENSG00000134070.4 TPM= 3.19 Transcript Type= protein_coding
chr3	10248023	10281216	10248023	10281216	+	ENST00000287652.8@TATDN2	ENST00000287652.8	protein_coding	10248023,10249195,10260137,10270131,10276361,10278279,10278885,10279221	10249067,10249614,10260670,10271015,10276488,10278462,10279034,10281216	Gene ID= ENSG00000157014.10 TPM= 11.68 Transcript Type= protein_coding
chr3	10300931	10321082	10300931	10321082	-	ENST00000337354.8@SEC13	ENST00000337354.8	protein_coding	10321050,10319139,10318050,10315321,10312579,10311965,10305559,10305033,10304026,10300931	10321082,10319172,10318094,10315436,10312730,10312098,10305692,10305156,10304172,10301374	Gene ID= ENSG00000157020.17 TPM= 2.55 Transcript Type= protein_coding
chr3	10300931	10321072	10300931	10321072	-	transcript283.chr3.nic@SEC13	transcript283.chr3.nic	protein_coding	10320509,10318050,10315321,10312579,10311965,10305559,10305033,10304026,10300931	10321072,10318094,10315436,10312730,10312098,10305692,10305156,10304172,10301374	Gene ID= ENSG00000157020.17 TPM= 6.8 Transcript Type= NA
chr3	10300950	10321112	10300950	10321112	-	transcript289.chr3.nic@SEC13	transcript289.chr3.nic	protein_coding	10321050,10318050,10315321,10312579,10311965,10305559,10305033,10304026,10300950	10321112,10318094,10315436,10312730,10312098,10305692,10305156,10304172,10301147	Gene ID= ENSG00000157020.17 TPM= 11.68 Transcript Type= NA
chr3	10300931	10321178	10300931	10321178	-	ENST00000350697.7@SEC13	ENST00000350697.7	protein_coding	10321050,10318050,10315321,10312579,10311965,10305559,10305033,10304026,10300931	10321178,10318094,10315436,10312730,10312098,10305692,10305156,10304172,10301374	Gene ID= ENSG00000157020.17 TPM= 83.27 Transcript Type= protein_coding
chr3	10311573	10321093	10311573	10321093	-	ENST00000397105.7@SEC13	ENST00000397105.7	protein_coding	10321050,10318050,10315321,10312579,10311573	10321093,10318094,10315436,10312730,10312098	Gene ID= ENSG00000157020.17 TPM= 1.06 Transcript Type= retained_intron
chr3	11556070	11719529	11556070	11719529	-	transcript299.chr3.nic@VGLL4	transcript299.chr3.nic	protein_coding	11719417,11702971,11601833,11564797,11559332,11556070	11719529,11703047,11602022,11565019,11559455,11558827	Gene ID= ENSG00000144560.14 TPM= 2.12 Transcript Type= NA
chr3	11558476	11643924	11558476	11643924	-	ENST00000430365.6@VGLL4	ENST00000430365.6	protein_coding	11643437,11601833,11564797,11559332,11558476	11643924,11602022,11565019,11559455,11558827	Gene ID= ENSG00000144560.14 TPM= 5.31 Transcript Type= protein_coding
chr3	11556070	11720746	11556070	11720746	-	ENST00000273038.7@VGLL4	ENST00000273038.7	protein_coding	11720394,11702971,11601833,11564797,11559332,11556070	11720746,11703047,11602022,11565019,11559455,11558827	Gene ID= ENSG00000144560.14 TPM= 23.37 Transcript Type= protein_coding
chr3	11642786	11645616	11642786	11645616	+	transcript307.chr3.nnic@NA	transcript307.chr3.nnic	NA	11642786	11645616	Gene ID= novel_gene_chr3_308 TPM= 2.12 Transcript Type= NA
chr3	11690687	11695117	11690687	11695117	+	transcript309.chr3.nnic@NA	transcript309.chr3.nnic	NA	11690687	11695117	Gene ID= novel_gene_chr3_310 TPM= 2.12 Transcript Type= NA
chr3	11790442	11846919	11790442	11846919	-	ENST00000273037.9@TAMM41	ENST00000273037.9	protein_coding	11846502,11844029,11839222,11829714,11817192,11809517,11790442	11846919,11844211,11839314,11829864,11817337,11809682,11790581	Gene ID= ENSG00000144559.10 TPM= 1.06 Transcript Type= protein_coding
chr3	12153051	12159351	12153051	12159351	-	ENST00000287814.4@TIMP4	ENST00000287814.4	protein_coding	12158702,12157385,12156820,12154327,12153051	12159351,12157482,12156934,12154451,12153712	Gene ID= ENSG00000157150.4 TPM= 4.25 Transcript Type= protein_coding
chr3	12287860	12434344	12287860	12434344	+	ENST00000309576.10@PPARG	ENST00000309576.10	protein_coding	12287860,12312380,12379704,12381322,12392614,12405882,12416704,12433898	12288020,12312453,12379931,12381491,12392752,12406081,12417154,12434344	Gene ID= ENSG00000132170.19 TPM= 7.44 Transcript Type= protein_coding
chr3	12287901	12434311	12287901	12434311	+	ENST00000397015.6@PPARG	ENST00000397015.6	protein_coding	12287901,12379704,12381322,12392614,12405882,12416704,12433898	12288020,12379931,12381491,12392752,12406081,12417154,12434311	Gene ID= ENSG00000132170.19 TPM= 1.06 Transcript Type= protein_coding
chr3	12557014	12583713	12557014	12583713	+	ENST00000170447.11@MKRN2	ENST00000170447.11	protein_coding	12557014,12568875,12570071,12572069,12574792,12576631,12581808,12582116	12557176,12569003,12570252,12572373,12575006,12576741,12581952,12583713	Gene ID= ENSG00000075975.15 TPM= 57.36 Transcript Type= protein_coding
chr3	12557090	12582626	12557090	12582626	+	ENST00000448482.1@MKRN2	ENST00000448482.1	protein_coding	12557090,12568875,12570071,12572069,12574792,12576631,12581808,12582116	12557176,12568997,12570252,12572373,12575006,12576741,12581952,12582626	Gene ID= ENSG00000075975.15 TPM= 1.06 Transcript Type= protein_coding
chr3	12583601	12664226	12583601	12664226	-	ENST00000251849.8@RAF1	ENST00000251849.8	protein_coding	12663813,12618515,12611950,12609233,12608766,12606201,12604136,12600388,12600152,12599691,12591708,12590798,12587591,12585681,12585122,12584847,12583601	12664226,12618747,12612062,12609335,12608923,12606299,12604289,12600415,12600279,12599808,12591792,12590974,12587637,12585799,12585253,12584981,12584657	Gene ID= ENSG00000132155.11 TPM= 78.15 Transcript Type= protein_coding
chr3	12583601	12663534	12583601	12663534	-	transcript341.chr3.nnic@RAF1	transcript341.chr3.nnic	protein_coding	12663369,12618515,12611950,12609233,12608766,12606201,12604136,12600388,12600152,12599691,12591708,12590798,12587591,12585681,12585122,12584847,12583601	12663534,12618747,12612062,12609335,12608923,12606299,12604289,12600415,12600279,12599808,12591792,12590974,12587637,12585799,12585253,12584981,12584657	Gene ID= ENSG00000132155.11 TPM= 13.36 Transcript Type= NA
chr3	12583601	12664139	12583601	12664139	-	transcript345.chr3.nic@RAF1	transcript345.chr3.nic	protein_coding	12663813,12618515,12611950,12609233,12608766,12604136,12600388,12600152,12599691,12591708,12590798,12587591,12585681,12585122,12584847,12583601	12664139,12618747,12612062,12609335,12608923,12604289,12600415,12600279,12599808,12591792,12590974,12587637,12585799,12585253,12584981,12584657	Gene ID= ENSG00000132155.11 TPM= 14.07 Transcript Type= NA
chr3	12812391	12817611	12812391	12817611	+	transcript368.chr3.nnic@CAND2	transcript368.chr3.nnic	protein_coding	12812391,12813246,12815141,12815867,12816367	12813095,12813388,12815433,12815998,12817611	Gene ID= ENSG00000144712.11 TPM= 3.19 Transcript Type= NA
chr3	12796680	12834803	12796680	12834803	+	ENST00000456430.6@CAND2	ENST00000456430.6	protein_coding	12796680,12803488,12807306,12808210,12810059,12812990,12813246,12815141,12815867,12816374,12820086,12825470,12827440,12831465,12833755	12796788,12803631,12807460,12808333,12810324,12813095,12813388,12815433,12816008,12817876,12820181,12825639,12827604,12831572,12834803	Gene ID= ENSG00000144712.11 TPM= 120.02 Transcript Type= protein_coding
chr3	12834485	12841588	12834485	12841588	-	ENST00000429711.6@RPL32	ENST00000429711.6	protein_coding	12841494,12840142,12839349,12834485	12841588,12840242,12839530,12836223	Gene ID= ENSG00000144713.12 TPM= 377.07 Transcript Type= protein_coding
chr3	12834946	12841582	12834946	12841582	-	ENST00000396957.5@RPL32	ENST00000396957.5	protein_coding	12841494,12840142,12839349,12834946	12841582,12840341,12839530,12836223	Gene ID= ENSG00000144713.12 TPM= 3.19 Transcript Type= protein_coding
chr3	12836050	12841545	12836050	12841545	-	ENST00000435983.5@RPL32	ENST00000435983.5	protein_coding	12841494,12840142,12839349,12836050	12841545,12840353,12839530,12836223	Gene ID= ENSG00000144713.12 TPM= 9.56 Transcript Type= protein_coding
chr3	12897220	12967668	12897220	12967668	-	ENST00000273221.8@IQSEC1	ENST00000273221.8	protein_coding	12967387,12941571,12935448,12924581,12922120,12920430,12915594,12915104,12913428,12911629,12909273,12908349,12902773,12897220	12967668,12941865,12936697,12924742,12922242,12920596,12915733,12915133,12913553,12911728,12909434,12908525,12902822,12899434	Gene ID= ENSG00000144711.13 TPM= 30.8 Transcript Type= protein_coding
chr3	12897873	12901273	12897873	12901273	-	transcript382.chr3.nnic@NA	transcript382.chr3.nnic	NA	12897873	12901273	Gene ID= novel_gene_chr3_383 TPM= 35.05 Transcript Type= NA
chr3	12901903	12902692	12901903	12902692	+	transcript380.chr3.nnic@NA	transcript380.chr3.nnic	NA	12901903	12902692	Gene ID= novel_gene_chr3_381 TPM= 3.19 Transcript Type= NA
chr3	12972087	12974904	12972087	12974904	-	transcript384.chr3.nnic@NA	transcript384.chr3.nnic	NA	12972087	12974904	Gene ID= novel_gene_chr3_385 TPM= 2.12 Transcript Type= NA
chr3	12994171	12996832	12994171	12996832	+	transcript378.chr3.nnic@NA	transcript378.chr3.nnic	NA	12994171	12996832	Gene ID= novel_gene_chr3_379 TPM= 9.56 Transcript Type= NA
chr3	13351663	13420309	13351663	13420309	-	ENST00000420141.2@NUP210	ENST00000420141.2	protein_coding	13420060,13399725,13397357,13391211,13388303,13386275,13379563,13378912,13377456,13376291,13375504,13373718,13371834,13365946,13360270,13358222,13353915,13353554,13352080,13351663	13420309,13399861,13397488,13391307,13388453,13386407,13379721,13378980,13377562,13376431,13375641,13373873,13372032,13366091,13360491,13358395,13354107,13353660,13352184,13351980	Gene ID= ENSG00000132182.11 TPM= 1.06 Transcript Type= retained_intron
chr3	13413900	13420296	13413900	13420296	-	transcript387.chr3.nnic@NUP210	transcript387.chr3.nnic	protein_coding	13420060,13413900	13420296,13414112	Gene ID= ENSG00000132182.11 TPM= 5.31 Transcript Type= NA
chr3	13480273	13506416	13480273	13506416	+	transcript389.chr3.nic@HDAC11	transcript389.chr3.nic	protein_coding	13480273,13481246,13483464,13496736,13498513,13500713,13501871,13502884,13504094,13504468	13480446,13481394,13483564,13496852,13498555,13500789,13501933,13502980,13504272,13506416	Gene ID= ENSG00000163517.14 TPM= 31.37 Transcript Type= NA
chr3	13480165	13506416	13480165	13506416	+	ENST00000295757.7@HDAC11	ENST00000295757.7	protein_coding	13480165,13481246,13483464,13496736,13498513,13500713,13501871,13502884,13504094,13504468	13480349,13481394,13483564,13496852,13498555,13500789,13501933,13502980,13504272,13506416	Gene ID= ENSG00000163517.14 TPM= 87.66 Transcript Type= protein_coding
chr3	13480281	13506416	13480281	13506416	+	transcript395.chr3.nic@HDAC11	transcript395.chr3.nic	protein_coding	13480281,13481246,13483464,13500713,13501871,13502884,13504094,13504468	13480349,13481394,13483564,13500789,13501933,13502980,13504272,13506416	Gene ID= ENSG00000163517.14 TPM= 8.53 Transcript Type= NA
chr3	13480339	13506416	13480339	13506416	+	transcript397.chr3.nic@HDAC11	transcript397.chr3.nic	protein_coding	13480339,13481246,13483464,13501871,13502884,13504094,13504468	13480446,13481394,13483564,13501933,13502980,13504272,13506416	Gene ID= ENSG00000163517.14 TPM= 9.06 Transcript Type= NA
chr3	13549116	13638422	13549116	13638422	+	transcript402.chr3.nnic@FBLN2	transcript402.chr3.nnic	protein_coding	13549116,13570315,13571316,13608062,13609513,13613984,13618076,13618904,13619730,13626445,13627832,13628905,13629164,13629820,13630699,13631329,13636445,13637562	13549208,13570970,13571661,13608173,13609642,13614164,13618285,13619017,13619831,13626579,13627969,13629048,13629292,13629945,13630815,13631457,13636568,13638422	Gene ID= ENSG00000163520.13 TPM= 9.91 Transcript Type= NA
chr3	13549131	13638422	13549131	13638422	+	ENST00000404922.7@FBLN2	ENST00000404922.7	protein_coding	13549131,13570315,13608062,13609513,13613984,13618076,13618904,13619730,13621775,13626445,13627832,13628905,13629164,13629820,13630699,13631329,13636445,13637562	13549208,13571661,13608173,13609642,13614164,13618285,13619017,13619831,13621915,13626579,13627969,13629048,13629292,13629945,13630815,13631457,13636568,13638422	Gene ID= ENSG00000163520.13 TPM= 23.19 Transcript Type= protein_coding
chr3	13549181	13638422	13549181	13638422	+	ENST00000295760.11@FBLN2	ENST00000295760.11	protein_coding	13549181,13570315,13608062,13609513,13613984,13618076,13618904,13619730,13626445,13627832,13628905,13629164,13629820,13630699,13631329,13636445,13637562	13549208,13571661,13608173,13609642,13614164,13618285,13619017,13619831,13626579,13627969,13629048,13629292,13629945,13630815,13631457,13636568,13638422	Gene ID= ENSG00000163520.13 TPM= 72.05 Transcript Type= protein_coding
chr3	14038529	14041044	14038529	14041044	-	transcript411.chr3.nnic@NA	transcript411.chr3.nnic	NA	14038529	14041044	Gene ID= novel_gene_chr3_412 TPM= 2.12 Transcript Type= NA
chr3	14112093	14124858	14112093	14124858	-	ENST00000396914.3@CHCHD4	ENST00000396914.3	protein_coding	14124655,14116426,14112093	14124858,14116524,14113194	Gene ID= ENSG00000163528.12 TPM= 35.05 Transcript Type= protein_coding
chr3	14112077	14124870	14112077	14124870	-	ENST00000295767.9@CHCHD4	ENST00000295767.9	protein_coding	14124655,14121917,14116426,14112077	14124870,14122086,14116524,14113194	Gene ID= ENSG00000163528.12 TPM= 7.44 Transcript Type= protein_coding
chr3	14124940	14143679	14124940	14143679	+	ENST00000306077.4@TMEM43	ENST00000306077.4	protein_coding	14124940,14129412,14130822,14131580,14132546,14132866,14133739,14134770,14135158,14135807,14139180,14141593	14125205,14129561,14130956,14131674,14132595,14132935,14133809,14134891,14135232,14135908,14139297,14143679	Gene ID= ENSG00000170876.7 TPM= 111.53 Transcript Type= protein_coding
chr3	14145147	14178783	14145147	14178783	-	ENST00000285021.11@XPC	ENST00000285021.11	protein_coding	14178466,14172867,14170438,14168257,14167169,14165428,14164813,14159741,14158011,14156335,14152335,14148814,14148562,14147908,14147290,14145147	14178783,14173062,14170550,14168380,14167253,14165585,14164933,14159830,14158892,14156495,14152416,14148948,14148731,14148001,14147379,14146159	Gene ID= ENSG00000154767.14 TPM= 32.93 Transcript Type= protein_coding
chr3	14471131	14489347	14471131	14489347	+	transcript436.chr3.nic@SLC6A6	transcript436.chr3.nic	protein_coding	14471131,14477205,14478466,14481671,14484867	14472317,14477342,14479185,14481841,14489347	Gene ID= ENSG00000131389.16 TPM= 92.41 Transcript Type= NA
chr3	14459884	14471107	14459884	14471107	+	transcript439.chr3.nnic@SLC6A6	transcript439.chr3.nnic	protein_coding	14459884,14466514,14467853	14463274,14466650,14471107	Gene ID= ENSG00000131389.16 TPM= 50.98 Transcript Type= NA
chr3	14401945	14417582	14401945	14417582	+	transcript442.chr3.nic@SLC6A6	transcript442.chr3.nic	protein_coding	14401945,14416412	14402847,14417582	Gene ID= ENSG00000131389.16 TPM= 4.25 Transcript Type= NA
chr3	14402576	14489347	14402576	14489347	+	ENST00000622186.4@SLC6A6	ENST00000622186.4	protein_coding	14402576,14416412,14443624,14445717,14447582,14457950,14466516,14467853,14468088,14472205,14477205,14478466,14479085,14481671,14484867	14402847,14416453,14443863,14445851,14447816,14458082,14466650,14467956,14468212,14472317,14477342,14478568,14479185,14481841,14489347	Gene ID= ENSG00000131389.16 TPM= 100.91 Transcript Type= protein_coding
chr3	14420491	14422263	14420491	14422263	-	transcript451.chr3.nnic@NA	transcript451.chr3.nnic	NA	14420491	14422263	Gene ID= novel_gene_chr3_452 TPM= 14.87 Transcript Type= NA
chr3	14454276	14456579	14454276	14456579	+	transcript447.chr3.nnic@NA	transcript447.chr3.nnic	NA	14454276	14456579	Gene ID= novel_gene_chr3_448 TPM= 3.19 Transcript Type= NA
chr3	14471132	14474773	14471132	14474773	-	transcript449.chr3.nnic@NA	transcript449.chr3.nnic	NA	14471132	14474773	Gene ID= novel_gene_chr3_450 TPM= 69.04 Transcript Type= NA
chr3	14514822	14540377	14514822	14540377	-	transcript459.chr3.nic@GRIP2	transcript459.chr3.nic	protein_coding	14540269,14525851,14525437,14524393,14523612,14523000,14521642,14520390,14520110,14517772,14514822	14540377,14525931,14525572,14524538,14523698,14523075,14521787,14520537,14520279,14517897,14517213	Gene ID= ENSG00000144596.12 TPM= 4.25 Transcript Type= NA
chr3	14514822	14540377	14514822	14540377	-	transcript462.chr3.nnic@GRIP2	transcript462.chr3.nnic	protein_coding	14540269,14525851,14525437,14524393,14523612,14523000,14521642,14520390,14520110,14514822	14540377,14525931,14525572,14524538,14523698,14523075,14521787,14520537,14520279,14517213	Gene ID= ENSG00000144596.12 TPM= 5.31 Transcript Type= NA
chr3	14517495	14540377	14517495	14540377	-	transcript467.chr3.nic@GRIP2	transcript467.chr3.nic	protein_coding	14540269,14525851,14525437,14524393,14523612,14523000,14521642,14520390,14520110,14517495	14540377,14525931,14525572,14524538,14523698,14523075,14521787,14520537,14520279,14517897	Gene ID= ENSG00000144596.12 TPM= 12.21 Transcript Type= NA
chr3	14517495	14540377	14517495	14540377	-	transcript473.chr3.nic@GRIP2	transcript473.chr3.nic	protein_coding	14540269,14525851,14525437,14524393,14523612,14523000,14521642,14520390,14517495	14540377,14525931,14525572,14524538,14523698,14523075,14521787,14520537,14520279	Gene ID= ENSG00000144596.12 TPM= 4.25 Transcript Type= NA
chr3	14517495	14540377	14517495	14540377	-	transcript474.chr3.nnic@GRIP2	transcript474.chr3.nnic	protein_coding	14540269,14525851,14525437,14523000,14521667,14520390,14520110,14517495	14540377,14525931,14525572,14524538,14521787,14520537,14520279,14517897	Gene ID= ENSG00000144596.12 TPM= 2.12 Transcript Type= NA
chr3	14520685	14540377	14520685	14540377	-	transcript476.chr3.nic@GRIP2	transcript476.chr3.nic	protein_coding	14540269,14525851,14525437,14524393,14523612,14523000,14520685	14540377,14525931,14525572,14524538,14523698,14523075,14521787	Gene ID= ENSG00000144596.12 TPM= 3.19 Transcript Type= NA
chr3	14520685	14540377	14520685	14540377	-	transcript479.chr3.nic@GRIP2	transcript479.chr3.nic	protein_coding	14540269,14525851,14525437,14524393,14523000,14520685	14540377,14525931,14525572,14524538,14523698,14521787	Gene ID= ENSG00000144596.12 TPM= 3.19 Transcript Type= NA
chr3	14520692	14540377	14520692	14540377	-	transcript488.chr3.nic@GRIP2	transcript488.chr3.nic	protein_coding	14540269,14525851,14525437,14520692	14540377,14525931,14525572,14524538	Gene ID= ENSG00000144596.12 TPM= 4.78 Transcript Type= NA
chr3	14510259	14512525	14510259	14512525	-	transcript490.chr3.nic@GRIP2	transcript490.chr3.nic	protein_coding	14511413,14510259	14512525,14511310	Gene ID= ENSG00000144596.12 TPM= 3.19 Transcript Type= NA
chr3	14520692	14540343	14520692	14540343	-	ENST00000413414.1@GRIP2	ENST00000413414.1	protein_coding	14540269,14525851,14525437,14524393,14520692	14540343,14525931,14525572,14524538,14523698	Gene ID= ENSG00000144596.12 TPM= 2.66 Transcript Type= retained_intron
chr3	14530972	14535435	14530972	14535435	-	transcript497.chr3.nnic@NA	transcript497.chr3.nnic	NA	14530972	14535435	Gene ID= novel_gene_chr3_498 TPM= 3.19 Transcript Type= NA
chr3	14541863	14543084	14541863	14543084	+	transcript493.chr3.nnic@NA	transcript493.chr3.nnic	NA	14541863	14543084	Gene ID= novel_gene_chr3_494 TPM= 2.12 Transcript Type= NA
chr3	14542164	14546463	14542164	14546463	-	transcript495.chr3.nnic@NA	transcript495.chr3.nnic	NA	14542164	14546463	Gene ID= novel_gene_chr3_496 TPM= 4.25 Transcript Type= NA
chr3	14651680	14668137	14651680	14668137	+	transcript504.chr3.nic@CCDC174	transcript504.chr3.nic	protein_coding	14651680,14654426,14655529,14658871,14661530,14665028,14666805,14667424,14668049	14651878,14654530,14655629,14658929,14661707,14665123,14666947,14667518,14668137	Gene ID= ENSG00000154781.15 TPM= 13.81 Transcript Type= NA
chr3	14818962	14934388	14818962	14934388	+	ENST00000285046.9@FGD5	ENST00000285046.9	protein_coding	14818962,14864128,14880572,14880742,14897509,14897939,14898739,14900403,14901003,14907640,14910861,14917249,14918754,14921918,14922411,14923046,14924008,14926070,14932577,14933131	14821596,14864260,14880630,14880772,14897669,14898095,14898826,14900453,14901061,14907711,14910929,14917332,14918833,14922017,14922548,14923175,14924138,14926198,14932731,14934388	Gene ID= ENSG00000154783.11 TPM= 2.12 Transcript Type= protein_coding
chr3	14942784	14947507	14942784	14947507	-	ENST00000424349.1@FGD5-AS1	ENST00000424349.1	antisense_RNA	14947087,14942784	14947507,14946154	Gene ID= ENSG00000225733.5 TPM= 58.42 Transcript Type= antisense_RNA
chr3	14944693	14948424	14944693	14948424	-	ENST00000426200.1@FGD5-AS1	ENST00000426200.1	antisense_RNA	14948013,14944693	14948424,14946154	Gene ID= ENSG00000225733.5 TPM= 2.12 Transcript Type= antisense_RNA
chr3	14945024	14947505	14945024	14947505	-	ENST00000440079.1@FGD5-AS1	ENST00000440079.1	antisense_RNA	14947110,14945024	14947505,14946154	Gene ID= ENSG00000225733.5 TPM= 4.25 Transcript Type= antisense_RNA
chr3	15059020	15065344	15059020	15065344	-	transcript539.chr3.nic@MRPS25	transcript539.chr3.nic	protein_coding	15065061,15059020	15065344,15059475	Gene ID= ENSG00000131368.7 TPM= 3.19 Transcript Type= NA
chr3	15070073	15099148	15070073	15099148	-	ENST00000253699.7@RBSN	ENST00000253699.7	protein_coding	15099035,15098119,15096535,15095973,15090399,15085861,15085000,15084735,15082367,15080732,15078075,15077062,15075606,15070073	15099148,15098274,15096710,15096288,15090539,15085961,15085045,15084896,15082608,15080802,15078161,15077164,15075710,15074930	Gene ID= ENSG00000131381.12 TPM= 10.62 Transcript Type= protein_coding
chr3	15073605	15099163	15073605	15099163	-	ENST00000476527.6@RBSN	ENST00000476527.6	protein_coding	15099035,15096535,15095973,15090399,15085861,15085000,15084735,15082367,15080732,15078075,15077062,15075606,15073605	15099163,15096710,15096288,15090539,15085961,15085045,15084896,15082608,15080802,15078161,15077164,15075710,15074930	Gene ID= ENSG00000131381.12 TPM= 3.19 Transcript Type= protein_coding
chr3	15206226	15252918	15206226	15252918	+	transcript561.chr3.nnic@CAPN7	transcript561.chr3.nnic	protein_coding	15206226,15212104,15217425,15218473,15220781,15223475,15227839,15228974,15230442,15232519,15233867,15235025,15240473,15240754,15242178,15246732,15247327,15250931,15251116	15206597,15212212,15217582,15218540,15220981,15223561,15227965,15229059,15230535,15232665,15233973,15235145,15240617,15240853,15242253,15246794,15247457,15251023,15252918	Gene ID= ENSG00000131375.9 TPM= 2.12 Transcript Type= NA
chr3	15206243	15252918	15206243	15252918	+	ENST00000253693.6@CAPN7	ENST00000253693.6	protein_coding	15206243,15212104,15217425,15218473,15220781,15223475,15227839,15228974,15230442,15232519,15233867,15235025,15240473,15240754,15241453,15242178,15245526,15246732,15247327,15250931,15251116	15206597,15212212,15217582,15218540,15220981,15223561,15227965,15229059,15230535,15232665,15233973,15235145,15240617,15240853,15241588,15242253,15245671,15246794,15247457,15251023,15252918	Gene ID= ENSG00000131375.9 TPM= 3.19 Transcript Type= protein_coding
chr3	15254184	15264493	15254184	15264493	+	ENST00000420195.1@SH3BP5-AS1	ENST00000420195.1	antisense_RNA	15254184,15258634,15264296	15257606,15260582,15264493	Gene ID= ENSG00000224660.1 TPM= 4.25 Transcript Type= antisense_RNA
chr3	15254853	15332629	15254853	15332629	-	ENST00000383791.7@SH3BP5	ENST00000383791.7	protein_coding	15332271,15330504,15304103,15269713,15262159,15259761,15258831,15256853,15254853	15332629,15330566,15304231,15269877,15262289,15259803,15259050,15257113,15256303	Gene ID= ENSG00000131370.15 TPM= 3.19 Transcript Type= protein_coding
chr3	15413669	15427534	15413669	15427534	-	transcript579.chr3.nic@METTL6	transcript579.chr3.nic	protein_coding	15427402,15426287,15424955,15415772,15415498,15413669	15427534,15426635,15425089,15415942,15415583,15413945	Gene ID= ENSG00000206562.11 TPM= 3.19 Transcript Type= NA
chr3	15414374	15427532	15414374	15427532	-	ENST00000383789.9@METTL6	ENST00000383789.9	protein_coding	15427402,15426287,15424955,15415772,15415498,15414374	15427532,15426635,15425089,15415942,15415583,15414914	Gene ID= ENSG00000206562.11 TPM= 1.06 Transcript Type= protein_coding
chr3	15427355	15442613	15427355	15442613	+	ENST00000396842.6@EAF1	ENST00000396842.6	protein_coding	15427355,15429913,15432087,15434348,15436342,15439109	15427882,15430007,15432223,15434538,15436575,15442613	Gene ID= ENSG00000144597.13 TPM= 3.19 Transcript Type= protein_coding
chr3	15450133	15456861	15450133	15456861	-	transcript599.chr3.nic@EAF1-AS1	transcript599.chr3.nic	antisense_RNA	15455899,15453829,15450133	15456861,15453931,15451713	Gene ID= ENSG00000249786.7 TPM= 2.12 Transcript Type= NA
chr3	15450133	15457452	15450133	15457452	-	transcript595.chr3.nic@COLQ	transcript595.chr3.nic	protein_coding	15456460,15455899,15453829,15450133	15457452,15456019,15453931,15451713	Gene ID= ENSG00000206561.12 TPM= 4.25 Transcript Type= NA
chr3	15450133	15521751	15450133	15521751	-	ENST00000383788.9@COLQ	ENST00000383788.9	protein_coding	15521520,15489525,15488206,15479338,15478977,15477126,15475425,15474925,15474228,15474000,15470536,15466341,15458186,15456460,15455899,15453829,15450133	15521751,15489637,15488307,15479382,15479003,15477197,15475487,15474951,15474272,15474035,15470616,15466437,15458325,15456579,15456019,15453931,15451713	Gene ID= ENSG00000206561.12 TPM= 28.68 Transcript Type= protein_coding
chr3	15451473	15521751	15451473	15521751	-	ENST00000603808.5@COLQ	ENST00000603808.5	protein_coding	15521520,15489525,15488206,15479338,15478977,15477126,15475425,15474925,15474228,15474000,15470536,15466341,15458186,15456460,15455895,15453829,15451473	15521751,15489637,15488307,15479382,15479003,15477197,15475487,15474951,15474272,15474035,15470616,15466437,15458325,15456579,15456019,15453930,15451713	Gene ID= ENSG00000206561.12 TPM= 1.06 Transcript Type= protein_coding
chr3	15458848	15463566	15458848	15463566	-	transcript604.chr3.nnic@NA	transcript604.chr3.nnic	NA	15458848	15463566	Gene ID= novel_gene_chr3_605 TPM= 2.12 Transcript Type= NA
chr3	15464134	15465173	15464134	15465173	+	transcript600.chr3.nnic@NA	transcript600.chr3.nnic	NA	15464134	15465173	Gene ID= novel_gene_chr3_601 TPM= 2.12 Transcript Type= NA
chr3	15483113	15486571	15483113	15486571	-	transcript606.chr3.nnic@NA	transcript606.chr3.nnic	NA	15483113	15486571	Gene ID= novel_gene_chr3_607 TPM= 3.19 Transcript Type= NA
chr3	15560704	15601831	15560704	15601831	-	ENST00000321169.9@HACL1	ENST00000321169.9	protein_coding	15601383,15601090,15596384,15591600,15589540,15586525,15585248,15582877,15579910,15574977,15573159,15571668,15568432,15567844,15564551,15563358,15560704	15601831,15601194,15596424,15591680,15589612,15586602,15585342,15582989,15580045,15575082,15573242,15571769,15568586,15568002,15564658,15563544,15560897	Gene ID= ENSG00000131373.14 TPM= 15.4 Transcript Type= protein_coding
chr3	15560747	15601569	15560747	15601569	-	ENST00000456194.6@HACL1	ENST00000456194.6	protein_coding	15601383,15601090,15596384,15589540,15586525,15585248,15582877,15579910,15574977,15573159,15571668,15568432,15567844,15564551,15563358,15560747	15601569,15601194,15596424,15589612,15586602,15585342,15582989,15580045,15575082,15573242,15571769,15568586,15568002,15564658,15563544,15560897	Gene ID= ENSG00000131373.14 TPM= 1.59 Transcript Type= protein_coding
chr3	15601727	15642233	15601727	15642233	+	transcript627.chr3.nic@BTD	transcript627.chr3.nic	protein_coding	15601727,15635424,15641908	15601894,15635688,15642233	Gene ID= ENSG00000169814.12 TPM= 2.12 Transcript Type= NA
chr3	15601742	15645822	15601742	15645822	+	ENST00000303498.9@BTD	ENST00000303498.9	protein_coding	15601742,15635424,15641908,15644316	15601894,15635688,15642057,15645822	Gene ID= ENSG00000169814.12 TPM= 10.62 Transcript Type= protein_coding
chr3	15667241	15859634	15667241	15859634	-	transcript611.chr3.nnic@ANKRD28	transcript611.chr3.nnic	protein_coding	15859377,15814240,15795223,15766234,15751750,15737033,15735410,15724382,15720915,15714578,15713527,15712140,15711211,15709668,15707924,15696134,15695188,15694739,15690019,15686222,15686002,15685226,15679476,15679301,15678209,15677480,15676974,15675898,15667241	15859634,15814309,15795306,15766312,15751820,15737233,15735497,15724524,15721127,15714656,15713641,15712222,15711274,15709736,15708064,15696245,15695214,15694813,15690220,15686309,15686119,15685445,15679563,15679384,15678354,15677562,15677056,15675989,15668305	Gene ID= ENSG00000206560.11 TPM= 2.12 Transcript Type= NA
chr3	15668599	15859634	15668599	15859634	-	transcript612.chr3.nic@ANKRD28	transcript612.chr3.nic	protein_coding	15859377,15814240,15795223,15766234,15751750,15737033,15735410,15724382,15720915,15714578,15713527,15712140,15711211,15709668,15707924,15696134,15695188,15694739,15690019,15686222,15686002,15685226,15679476,15679301,15678209,15677480,15676974,15675898,15668599	15859634,15814309,15795306,15766312,15751820,15737233,15735497,15724524,15721127,15714656,15713641,15712222,15711274,15709736,15708064,15696245,15695214,15694813,15690220,15686309,15686119,15685445,15679563,15679384,15678354,15677562,15677056,15675989,15670556	Gene ID= ENSG00000206560.11 TPM= 3.19 Transcript Type= NA
chr3	16257979	16264969	16257979	16264969	-	ENST00000383775.4@DPH3	ENST00000383775.4	protein_coding	16264769,16257979	16264969,16260829	Gene ID= ENSG00000154813.9 TPM= 19.65 Transcript Type= protein_coding
chr3	16257978	16264972	16257978	16264972	-	ENST00000488423.1@DPH3	ENST00000488423.1	protein_coding	16264769,16264155,16257978	16264972,16264229,16260829	Gene ID= ENSG00000154813.9 TPM= 55.76 Transcript Type= protein_coding
chr3	16265199	16306087	16265199	16306087	+	ENST00000285083.9@OXNAD1	ENST00000285083.9	protein_coding	16265199,16269126,16270945,16271659,16286342,16294856,16301626,16302640,16303408	16265505,16269275,16271071,16271722,16286448,16294997,16301868,16302748,16306087	Gene ID= ENSG00000154814.13 TPM= 2.12 Transcript Type= protein_coding
chr3	16265202	16337361	16265202	16337361	+	ENST00000605932.5@OXNAD1	ENST00000605932.5	protein_coding	16265202,16269126,16270945,16271659,16286342,16294856,16301626,16302640,16303408,16337112	16265505,16269275,16271071,16271722,16286448,16294997,16301868,16302748,16303592,16337361	Gene ID= ENSG00000154814.13 TPM= 1.06 Transcript Type= protein_coding
chr3	16315856	16513706	16315856	16513706	-	ENST00000334133.8@RFTN1	ENST00000334133.8	protein_coding	16513442,16493725,16433851,16409375,16377718,16370076,16357932,16326773,16323376,16315856	16513706,16493877,16434037,16409483,16378102,16370279,16358047,16326876,16323457,16317232	Gene ID= ENSG00000131378.13 TPM= 14.87 Transcript Type= protein_coding
chr3	16509006	16513716	16509006	16513716	-	transcript663.chr3.nnic@NA	transcript663.chr3.nnic	NA	16509006	16513716	Gene ID= novel_gene_chr3_664 TPM= 3.19 Transcript Type= NA
chr3	16884232	17090594	16884232	17090594	+	transcript667.chr3.nnic@PLCL2	transcript667.chr3.nnic	protein_coding	16884232,16884822,17009674,17014708,17042874,17067956,17089733	16884536,16885366,17012160,17014911,17042949,17068065,17090594	Gene ID= ENSG00000154822.17 TPM= 4.25 Transcript Type= NA
chr3	16884959	17090594	16884959	17090594	+	ENST00000615277.4@PLCL2	ENST00000615277.4	protein_coding	16884959,17009674,17014708,17042874,17067956,17089733	16885366,17012160,17014911,17042949,17068065,17090594	Gene ID= ENSG00000154822.17 TPM= 18.06 Transcript Type= protein_coding
chr3	16884968	16887806	16884968	16887806	+	transcript675.chr3.nnic@NA	transcript675.chr3.nnic	NA	16884968	16887806	Gene ID= novel_gene_chr3_676 TPM= 7.44 Transcript Type= NA
chr3	17140867	17157731	17140867	17157731	+	transcript690.chr3.nnic@NA	transcript690.chr3.nnic	NA	17140867,17151448,17155320	17141091,17151895,17157731	Gene ID= novel_gene_chr3_691 TPM= 4.25 Transcript Type= NA
chr3	17157162	17742640	17157162	17742640	-	transcript680.chr3.nic@TBC1D5	transcript680.chr3.nic	protein_coding	17742481,17623849,17508474,17428450,17406418,17404872,17404694,17403181,17383913,17376525,17374629,17374471,17372075,17307992,17291895,17258506,17238163,17214207,17185109,17167749,17166767,17157162	17742640,17623913,17508605,17428519,17406526,17404961,17404768,17403248,17384015,17376613,17374679,17374540,17372247,17308134,17292001,17258591,17238419,17214370,17185208,17167828,17166928,17161256	Gene ID= ENSG00000131374.14 TPM= 14.34 Transcript Type= NA
chr3	18421031	18421855	18421031	18421855	+	transcript700.chr3.nnic@NA	transcript700.chr3.nnic	NA	18421031	18421855	Gene ID= novel_gene_chr3_701 TPM= 2.12 Transcript Type= NA
chr3	19945914	19947025	19945914	19947025	-	ENST00000474780.1@EFHB	ENST00000474780.1	protein_coding	19946919,19945914	19947025,19946254	Gene ID= ENSG00000163576.17 TPM= 1.06 Transcript Type= processed_transcript
chr3	19947107	19985175	19947107	19985175	+	transcript707.chr3.nnic@RAB5A	transcript707.chr3.nnic	protein_coding	19947107,19947418,19950806,19975601,19976047,19978310,19983708	19947264,19947521,19951061,19975752,19976169,19978403,19985175	Gene ID= ENSG00000144566.10 TPM= 3.19 Transcript Type= NA
chr3	19947079	19985175	19947079	19985175	+	ENST00000273047.8@RAB5A	ENST00000273047.8	protein_coding	19947079,19950806,19975601,19976047,19978310,19983708	19947521,19951061,19975752,19976169,19978403,19985175	Gene ID= ENSG00000144566.10 TPM= 111.53 Transcript Type= protein_coding
chr3	19951703	19955714	19951703	19955714	-	transcript711.chr3.nnic@NA	transcript711.chr3.nnic	NA	19951703	19955714	Gene ID= novel_gene_chr3_712 TPM= 22.31 Transcript Type= NA
chr3	20040023	20154404	20040023	20154404	+	ENST00000263754.4@KAT2B	ENST00000263754.4	protein_coding	20040023,20072333,20095263,20099862,20101287,20111596,20114882,20119598,20122668,20125905,20127423,20136942,20140221,20146316,20147963,20148243,20148403,20152332	20040780,20072459,20095408,20099954,20101468,20111787,20114988,20119723,20122804,20126113,20127549,20137052,20140364,20146430,20147999,20148306,20148487,20154404	Gene ID= ENSG00000114166.7 TPM= 29.74 Transcript Type= protein_coding
chr3	20040382	20080886	20040382	20080886	+	transcript717.chr3.nnic@KAT2B	transcript717.chr3.nnic	protein_coding	20040382,20072333,20078418	20040780,20072459,20080886	Gene ID= ENSG00000114166.7 TPM= 2.12 Transcript Type= NA
chr3	20112168	20114011	20112168	20114011	-	transcript718.chr3.nnic@NA	transcript718.chr3.nnic	NA	20112168	20114011	Gene ID= novel_gene_chr3_719 TPM= 2.12 Transcript Type= NA
chr3	21435256	21751210	21435256	21751210	-	transcript721.chr3.nic@ZNF385D	transcript721.chr3.nic	protein_coding	21750895,21664886,21564574,21510861,21435256	21751210,21665028,21564684,21511023,21437203	Gene ID= ENSG00000151789.10 TPM= 2.12 Transcript Type= NA
chr3	23310302	23312513	23310302	23312513	-	transcript729.chr3.nnic@NA	transcript729.chr3.nnic	NA	23310302	23312513	Gene ID= novel_gene_chr3_730 TPM= 2.12 Transcript Type= NA
chr3	23203293	23591793	23203293	23591793	+	ENST00000396703.5@UBE2E2	ENST00000396703.5	protein_coding	23203293,23208692,23217262,23499608,23532554,23589734	23203464,23208875,23217312,23499740,23532701,23591793	Gene ID= ENSG00000182247.9 TPM= 61.61 Transcript Type= protein_coding
chr3	23831889	23834057	23831889	23834057	+	transcript734.chr3.nnic@NA	transcript734.chr3.nnic	NA	23831889	23834057	Gene ID= novel_gene_chr3_735 TPM= 2.12 Transcript Type= NA
chr3	23892081	23917065	23892081	23917065	-	ENST00000425478.6@NKIRAS1	ENST00000425478.6	protein_coding	23916784,23911329,23910811,23900808,23892081	23917065,23911450,23910921,23901049,23893337	Gene ID= ENSG00000197885.10 TPM= 12.75 Transcript Type= protein_coding
chr3	23892288	23917054	23892288	23917054	-	transcript743.chr3.nnic@NKIRAS1	transcript743.chr3.nnic	protein_coding	23916933,23911329,23910811,23900808,23892288	23917054,23911450,23910921,23901049,23893337	Gene ID= ENSG00000197885.10 TPM= 2.12 Transcript Type= NA
chr3	23892310	23916924	23892310	23916924	-	ENST00000415901.6@NKIRAS1	ENST00000415901.6	protein_coding	23916784,23911329,23910811,23900804,23892310	23916924,23911450,23910921,23901049,23893333	Gene ID= ENSG00000197885.10 TPM= 9.56 Transcript Type= protein_coding
chr3	23892307	23916963	23892307	23916963	-	ENST00000412028.5@NKIRAS1	ENST00000412028.5	protein_coding	23916861,23911329,23910811,23900804,23892307	23916963,23911446,23910921,23901049,23893333	Gene ID= ENSG00000197885.10 TPM= 1.06 Transcript Type= protein_coding
chr3	23916545	23920977	23916545	23920977	+	ENST00000307839.9@RPL15	ENST00000307839.9	protein_coding	23916545,23917850,23918440,23919196	23917173,23918031,23918576,23920977	Gene ID= ENSG00000174748.18 TPM= 78.87 Transcript Type= protein_coding
chr3	23917131	23920820	23917131	23920820	+	ENST00000413699.5@RPL15	ENST00000413699.5	protein_coding	23917131,23917850,23918440,23919196	23917239,23918031,23918576,23920820	Gene ID= ENSG00000174748.18 TPM= 20.45 Transcript Type= protein_coding
chr3	23916804	23920856	23916804	23920856	+	ENST00000611050.4@RPL15	ENST00000611050.4	protein_coding	23916804,23917837,23918440,23919196	23917173,23918031,23918576,23920856	Gene ID= ENSG00000174748.18 TPM= 19.38 Transcript Type= protein_coding
chr3	23917148	23919791	23917148	23919791	+	ENST00000435882.5@RPL15	ENST00000435882.5	protein_coding	23917148,23917850,23918440,23919196	23917295,23918031,23918576,23919791	Gene ID= ENSG00000174748.18 TPM= 11.95 Transcript Type= protein_coding
chr3	23945260	23980618	23945260	23980618	+	ENST00000312521.8@NR1D2	ENST00000312521.8	protein_coding	23945260,23954537,23956037,23959671,23961977,23964977,23967813,23977223	23945594,23954803,23956125,23959815,23962605,23965162,23968023,23980618	Gene ID= ENSG00000174738.12 TPM= 15.93 Transcript Type= protein_coding
chr3	23945308	23948130	23945308	23948130	+	transcript774.chr3.nnic@NA	transcript774.chr3.nnic	NA	23945308	23948130	Gene ID= novel_gene_chr3_775 TPM= 2.12 Transcript Type= NA
chr3	24117160	24494822	24117160	24494822	-	ENST00000396671.6@THRB	ENST00000396671.6	protein_coding	24494687,24337300,24297226,24228938,24190074,24152390,24146675,24143501,24133316,24127499,24117160	24494822,24337371,24297371,24229001,24190334,24152490,24146822,24143706,24133462,24127757,24123125	Gene ID= ENSG00000151090.17 TPM= 1.06 Transcript Type= protein_coding
chr3	25428311	25597932	25428311	25597932	+	ENST00000330688.8@RARB	ENST00000330688.8	protein_coding	25428311,25461193,25501182,25569758,25580546,25593503,25594520,25596420	25428888,25461341,25501323,25569918,25580722,25593707,25594678,25597932	Gene ID= ENSG00000077092.18 TPM= 25.49 Transcript Type= protein_coding
chr3	25528353	25531707	25528353	25531707	+	transcript790.chr3.nnic@NA	transcript790.chr3.nnic	NA	25528353	25531707	Gene ID= novel_gene_chr3_791 TPM= 2.12 Transcript Type= NA
chr3	25539534	25541641	25539534	25541641	-	transcript792.chr3.nnic@NA	transcript792.chr3.nnic	NA	25539534	25541641	Gene ID= novel_gene_chr3_793 TPM= 3.19 Transcript Type= NA
chr3	25628890	25664945	25628890	25664945	-	transcript799.chr3.nic@TOP2B	transcript799.chr3.nic	protein_coding	25664229,25645300,25643694,25642322,25638165,25637215,25635936,25633841,25632693,25632446,25630801,25630312,25630029,25629035,25628890	25664945,25645455,25643784,25642385,25638310,25637312,25636148,25634014,25632794,25632583,25630939,25630469,25630154,25629145,25628952	Gene ID= ENSG00000077097.15 TPM= 7.44 Transcript Type= NA
chr3	25631893	25634795	25631893	25634795	+	transcript803.chr3.nnic@NA	transcript803.chr3.nnic	NA	25631893	25634795	Gene ID= novel_gene_chr3_804 TPM= 7.44 Transcript Type= NA
chr3	25661000	25664915	25661000	25664915	-	transcript805.chr3.nnic@NA	transcript805.chr3.nnic	NA	25661000	25664915	Gene ID= novel_gene_chr3_806 TPM= 7.44 Transcript Type= NA
chr3	25719113	25783551	25719113	25783551	-	ENST00000280700.9@NGLY1	ENST00000280700.9	protein_coding	25783260,25778574,25764066,25751098,25739577,25737334,25736004,25733872,25732319,25729133,25720014,25719113	25783551,25778688,25764311,25751263,25739799,25737455,25736149,25733982,25732483,25729318,25720191,25719635	Gene ID= ENSG00000151092.16 TPM= 63.73 Transcript Type= protein_coding
chr3	25718945	25783498	25718945	25783498	-	ENST00000428257.5@NGLY1	ENST00000428257.5	protein_coding	25783260,25778574,25764066,25751098,25739577,25737334,25736309,25733872,25732319,25729133,25720014,25718945	25783498,25778688,25764311,25751263,25739799,25737455,25736400,25733982,25732483,25729318,25720191,25719635	Gene ID= ENSG00000151092.16 TPM= 1.06 Transcript Type= protein_coding
chr3	25718945	25783414	25718945	25783414	-	transcript811.chr3.nic@NGLY1	transcript811.chr3.nic	protein_coding	25783260,25778574,25764066,25751098,25739577,25737334,25736004,25733872,25729133,25720014,25718945	25783414,25778688,25764311,25751263,25739799,25737455,25736149,25733982,25729318,25720191,25719635	Gene ID= ENSG00000151092.16 TPM= 5.31 Transcript Type= NA
chr3	25719271	25783438	25719271	25783438	-	ENST00000396649.7@NGLY1	ENST00000396649.7	protein_coding	25783260,25778574,25764066,25751098,25739577,25737334,25736004,25733872,25732319,25729133,25719271	25783438,25778688,25764311,25751263,25739799,25737455,25736149,25733982,25732483,25729318,25719635	Gene ID= ENSG00000151092.16 TPM= 1.06 Transcript Type= protein_coding
chr3	25790080	25794534	25790080	25794534	+	ENST00000280701.7@OXSM	ENST00000280701.7	protein_coding	25790080,25790990,25794092	25790147,25791997,25794534	Gene ID= ENSG00000151093.7 TPM= 15.93 Transcript Type= protein_coding
chr3	25790090	25794523	25790090	25794523	+	ENST00000448177.1@OXSM	ENST00000448177.1	protein_coding	25790090,25790990,25791770,25794092	25790147,25791315,25791997,25794523	Gene ID= ENSG00000151093.7 TPM= 1.06 Transcript Type= nonsense_mediated_decay
chr3	28241595	28325142	28241595	28325142	+	ENST00000466830.5@CMC1	ENST00000466830.5	protein_coding	28241595,28263291,28316333,28319509	28241812,28263380,28316423,28325142	Gene ID= ENSG00000187118.12 TPM= 22.31 Transcript Type= protein_coding
chr3	28241612	28319773	28241612	28319773	+	transcript832.chr3.nnic@CMC1	transcript832.chr3.nnic	protein_coding	28241612,28316333,28319509	28241901,28316423,28319773	Gene ID= ENSG00000187118.12 TPM= 2.12 Transcript Type= NA
chr3	28241618	28319771	28241618	28319771	+	ENST00000423894.5@CMC1	ENST00000423894.5	protein_coding	28241618,28316333,28319509	28241812,28316423,28319771	Gene ID= ENSG00000187118.12 TPM= 27.62 Transcript Type= protein_coding
chr3	28321047	28349127	28321047	28349127	-	ENST00000479665.5@AZI2	ENST00000479665.5	protein_coding	28348601,28340402,28338493,28337937,28336737,28332369,28326832,28321047	28349127,28340622,28338615,28338036,28336885,28332427,28326950,28324454	Gene ID= ENSG00000163512.13 TPM= 1.06 Transcript Type= protein_coding
chr3	28331691	28349050	28331691	28349050	-	ENST00000420543.6@AZI2	ENST00000420543.6	protein_coding	28348601,28340402,28338493,28337937,28336737,28332369,28331691	28349050,28340622,28338615,28338036,28336885,28332427,28331954	Gene ID= ENSG00000163512.13 TPM= 14.87 Transcript Type= protein_coding
chr3	29281116	29284794	29281116	29284794	-	transcript862.chr3.nnic@NA	transcript862.chr3.nnic	NA	29281116	29284794	Gene ID= novel_gene_chr3_863 TPM= 71.16 Transcript Type= NA
chr3	29288748	29294428	29288748	29294428	+	transcript858.chr3.nnic@NA	transcript858.chr3.nnic	NA	29288748	29294428	Gene ID= novel_gene_chr3_859 TPM= 2.12 Transcript Type= NA
chr3	29617913	29621774	29617913	29621774	+	transcript860.chr3.nnic@NA	transcript860.chr3.nnic	NA	29617913	29621774	Gene ID= novel_gene_chr3_861 TPM= 2.12 Transcript Type= NA
chr3	29798931	29802416	29798931	29802416	-	transcript864.chr3.nnic@NA	transcript864.chr3.nnic	NA	29798931	29802416	Gene ID= novel_gene_chr3_865 TPM= 6.37 Transcript Type= NA
chr3	30606502	30694134	30606502	30694134	+	ENST00000295754.9@TGFBR2	ENST00000295754.9	protein_coding	30606502,30644747,30650270,30671638,30674105,30688384,30691420	30606977,30644915,30650460,30672437,30674246,30688511,30694134	Gene ID= ENSG00000163513.17 TPM= 72.23 Transcript Type= protein_coding
chr3	30611584	30613077	30611584	30613077	-	transcript873.chr3.nnic@NA	transcript873.chr3.nnic	NA	30611584	30613077	Gene ID= novel_gene_chr3_874 TPM= 8.5 Transcript Type= NA
chr3	30613133	30616135	30613133	30616135	-	transcript877.chr3.nnic@NA	transcript877.chr3.nnic	NA	30613133	30616135	Gene ID= novel_gene_chr3_878 TPM= 3.19 Transcript Type= NA
chr3	30687396	30688204	30687396	30688204	-	transcript875.chr3.nnic@NA	transcript875.chr3.nnic	NA	30687396	30688204	Gene ID= novel_gene_chr3_876 TPM= 3.19 Transcript Type= NA
chr3	31530911	31532381	31530911	31532381	-	transcript879.chr3.nnic@NA	transcript879.chr3.nnic	NA	31530911	31532381	Gene ID= novel_gene_chr3_880 TPM= 3.19 Transcript Type= NA
chr3	31532754	31637617	31532754	31637617	+	transcript886.chr3.nic@STT3B	transcript886.chr3.nic	protein_coding	31532754,31576396,31579809,31596798,31600360,31615105,31616929,31617940,31619676,31622097,31623674,31624914,31625954,31629298,31632935,31635984	31533312,31576504,31580096,31596863,31600459,31615203,31617075,31617988,31619830,31622308,31623861,31625085,31626127,31629411,31633184,31637617	Gene ID= ENSG00000163527.9 TPM= 3.72 Transcript Type= NA
chr3	31580175	31637622	31580175	31637622	+	transcript892.chr3.nnic@STT3B	transcript892.chr3.nnic	protein_coding	31580175,31596798,31600360,31615105,31616929,31617940,31619676,31622097,31623674,31624914,31625954,31629298,31632935,31635984	31580375,31596863,31600459,31615203,31617075,31617988,31619830,31622308,31623861,31625085,31626127,31629411,31633147,31637622	Gene ID= ENSG00000163527.9 TPM= 3.19 Transcript Type= NA
chr3	31532790	31637622	31532790	31637622	+	ENST00000295770.3@STT3B	ENST00000295770.3	protein_coding	31532790,31576396,31579809,31596798,31600360,31615105,31616929,31617940,31619676,31622097,31623674,31624914,31625954,31629298,31632935,31635984	31533312,31576504,31580096,31596863,31600459,31615203,31617075,31617988,31619830,31622308,31623861,31625085,31626127,31629411,31633147,31637622	Gene ID= ENSG00000163527.9 TPM= 61.61 Transcript Type= protein_coding
chr3	31535309	31540644	31535309	31540644	-	transcript897.chr3.nnic@NA	transcript897.chr3.nnic	NA	31535309	31540644	Gene ID= novel_gene_chr3_898 TPM= 2.12 Transcript Type= NA
chr3	31540469	31540736	31540469	31540736	-	transcript895.chr3.nnic@NA	transcript895.chr3.nnic	NA	31540469	31540736	Gene ID= novel_gene_chr3_896 TPM= 2.12 Transcript Type= NA
chr3	31585558	31587307	31585558	31587307	-	transcript899.chr3.nnic@NA	transcript899.chr3.nnic	NA	31585558	31587307	Gene ID= novel_gene_chr3_900 TPM= 3.19 Transcript Type= NA
chr3	32106511	32168713	32106511	32168713	+	ENST00000282541.9@GPD1L	ENST00000282541.9	protein_coding	32106511,32128076,32138587,32140228,32146622,32158876,32159568,32165814	32106758,32128253,32138727,32140366,32146734,32159109,32159674,32168713	Gene ID= ENSG00000152642.10 TPM= 176.14 Transcript Type= protein_coding
chr3	32106630	32168706	32106630	32168706	+	transcript909.chr3.nnic@GPD1L	transcript909.chr3.nnic	protein_coding	32106630,32128076,32138587,32140228,32146622,32159568,32165814	32106758,32128253,32138727,32140366,32146734,32159674,32168706	Gene ID= ENSG00000152642.10 TPM= 24.78 Transcript Type= NA
chr3	32236688	32238578	32236688	32238578	-	ENST00000565519.1@AC097639.1	ENST00000565519.1	sense_intronic	32236688	32238578	Gene ID= ENSG00000261572.1 TPM= 1.06 Transcript Type= sense_intronic
chr3	32238188	32370321	32238188	32370321	+	transcript918.chr3.nnic@CMTM8	transcript918.chr3.nnic	protein_coding	32238188,32238742,32357373,32367872,32369884	32238269,32239119,32357546,32367988,32370321	Gene ID= ENSG00000170293.8 TPM= 2.12 Transcript Type= NA
chr3	32238679	32370321	32238679	32370321	+	ENST00000458535.6@CMTM8	ENST00000458535.6	protein_coding	32238679,32367872,32369884	32239119,32367988,32370321	Gene ID= ENSG00000170293.8 TPM= 1.06 Transcript Type= protein_coding
chr3	32238679	32370325	32238679	32370325	+	ENST00000307526.3@CMTM8	ENST00000307526.3	protein_coding	32238679,32357373,32367872,32369884	32239119,32357546,32367988,32370325	Gene ID= ENSG00000170293.8 TPM= 5.31 Transcript Type= protein_coding
chr3	32391671	32455528	32391671	32455528	+	ENST00000334983.9@CMTM7	ENST00000334983.9	protein_coding	32391671,32441840,32449454,32452392,32454241	32392065,32442013,32449552,32452473,32455528	Gene ID= ENSG00000153551.13 TPM= 4.25 Transcript Type= protein_coding
chr3	32391670	32442527	32391670	32442527	+	transcript924.chr3.nic@CMTM7	transcript924.chr3.nic	protein_coding	32391670,32441840	32392065,32442527	Gene ID= ENSG00000153551.13 TPM= 2.12 Transcript Type= NA
chr3	32481312	32503408	32481312	32503408	-	ENST00000205636.3@CMTM6	ENST00000205636.3	protein_coding	32502608,32491710,32487938,32481312	32503408,32491886,32488036,32484097	Gene ID= ENSG00000091317.7 TPM= 12.75 Transcript Type= protein_coding
chr3	32534604	32570891	32534604	32570891	-	transcript935.chr3.nic@DYNC1LI1	transcript935.chr3.nic	protein_coding	32570625,32570346,32545849,32544876,32541037,32537011,32534604	32570891,32570419,32545965,32545106,32541206,32537104,32534646	Gene ID= ENSG00000144635.8 TPM= 5.31 Transcript Type= NA
chr3	32525971	32570874	32525971	32570874	-	ENST00000273130.8@DYNC1LI1	ENST00000273130.8	protein_coding	32570625,32570346,32545849,32544876,32541037,32537011,32534511,32532986,32530461,32530284,32529540,32528446,32525971	32570874,32570419,32545965,32545106,32541206,32537104,32534646,32533097,32530520,32530328,32529660,32528601,32526908	Gene ID= ENSG00000144635.8 TPM= 99.84 Transcript Type= protein_coding
chr3	32570248	32572515	32570248	32572515	+	transcript938.chr3.nnic@NA	transcript938.chr3.nnic	NA	32570248	32572515	Gene ID= novel_gene_chr3_939 TPM= 7.44 Transcript Type= NA
chr3	32685145	32773875	32685145	32773875	+	ENST00000328834.9@CNOT10	ENST00000328834.9	protein_coding	32685145,32703868,32704811,32708670,32713227,32716225,32717154,32720114,32725450,32727668,32733423,32734800,32737410,32759458,32762733,32764455,32764682,32769887,32773457	32685482,32703962,32704972,32708820,32713369,32716311,32717237,32720231,32725599,32727870,32733544,32734976,32737490,32759571,32762863,32764490,32764809,32769962,32773875	Gene ID= ENSG00000182973.18 TPM= 13.81 Transcript Type= protein_coding
chr3	32996609	33096835	32996609	33096835	-	ENST00000399402.7@GLB1	ENST00000399402.7	protein_coding	33096719,33072544,33068820,33068230,33065463,33058089,33053491,33051883,33051758,33046120,33024251,33021566,33018448,33016709,33014056,32996609	33096835,33072713,33068970,33068290,33065557,33058269,33053549,33052004,33051798,33046232,33024325,33021655,33018561,33016840,33014310,32997344	Gene ID= ENSG00000170266.15 TPM= 1.06 Transcript Type= protein_coding
chr3	32996608	33097230	32996608	33097230	-	ENST00000307363.9@GLB1	ENST00000307363.9	protein_coding	33097011,33072544,33068820,33068230,33065463,33058089,33053491,33051883,33051758,33046120,33024251,33021566,33018448,33016709,33014056,32996608	33097230,33072713,33068970,33068290,33065557,33058269,33053549,33052004,33051798,33046232,33024325,33021655,33018561,33016840,33014310,32997344	Gene ID= ENSG00000170266.15 TPM= 7.44 Transcript Type= protein_coding
chr3	33083558	33083691	33083558	33083691	-	transcript953.chr3.nnic@NA	transcript953.chr3.nnic	NA	33083558	33083691	Gene ID= novel_gene_chr3_954 TPM= 2.12 Transcript Type= NA
chr3	33144802	33146828	33144802	33146828	+	transcript962.chr3.nnic@NA	transcript962.chr3.nnic	NA	33144802	33146828	Gene ID= novel_gene_chr3_963 TPM= 3.19 Transcript Type= NA
chr3	33277422	33388092	33277422	33388092	+	ENST00000484457.5@FBXL2	ENST00000484457.5	protein_coding	33277422,33297664,33358967,33359283,33364625,33373092,33373260,33373578,33373847,33375288,33377273,33378103,33378685,33383989,33385501	33277515,33297725,33359021,33359357,33364719,33373160,33373355,33373704,33373921,33375418,33377333,33378147,33378741,33384201,33388092	Gene ID= ENSG00000153558.13 TPM= 4.25 Transcript Type= protein_coding
chr3	33407519	33440409	33407519	33440409	-	transcript972.chr3.nic@UBP1	transcript972.chr3.nic	protein_coding	33439736,33425590,33416758,33412722,33411581,33409449,33409236,33407519	33440409,33425741,33416834,33412827,33411687,33409601,33409346,33408797	Gene ID= ENSG00000153560.11 TPM= 3.19 Transcript Type= NA
chr3	33388336	33440378	33388336	33440378	-	ENST00000283629.7@UBP1	ENST00000283629.7	protein_coding	33439736,33425590,33416758,33412722,33411581,33409449,33409236,33408690,33402801,33400962,33400189,33397045,33396162,33393312,33392563,33388336	33440378,33425741,33416834,33412827,33411687,33409601,33409346,33408797,33402904,33401016,33400282,33397135,33396280,33393454,33392614,33390368	Gene ID= ENSG00000153560.11 TPM= 29.74 Transcript Type= protein_coding
chr3	33496993	33718256	33496993	33718256	-	transcript980.chr3.nnic@CLASP2	transcript980.chr3.nnic	protein_coding	33717808,33696855,33689829,33688277,33687060,33684359,33663445,33644757,33632292,33626988,33622135,33619603,33612001,33608567,33607384,33606591,33604154,33602952,33592395,33584750,33581821,33576169,33574473,33573110,33570727,33560808,33559307,33559125,33551252,33544698,33543433,33538789,33535233,33516981,33516023,33510558,33501652,33496993	33718256,33696933,33689932,33688368,33687135,33684456,33663515,33644903,33632371,33627080,33622280,33619738,33612071,33608626,33607461,33606758,33604209,33603125,33592496,33584920,33581928,33576275,33574496,33573354,33570790,33560971,33559385,33559175,33551395,33544841,33543539,33538942,33535461,33517174,33516151,33510764,33501768,33498717	Gene ID= ENSG00000163539.16 TPM= 10.97 Transcript Type= NA
chr3	33496993	33659119	33496993	33659119	-	transcript985.chr3.nnic@CLASP2	transcript985.chr3.nnic	protein_coding	33658974,33644757,33632292,33626988,33622135,33619603,33612001,33608567,33607384,33606591,33604154,33602952,33592395,33584750,33581821,33576169,33573110,33570727,33563964,33560808,33559307,33559125,33551252,33544698,33543433,33538789,33535233,33516981,33516023,33510558,33501652,33496993	33659119,33644903,33632371,33627080,33622280,33619738,33612071,33608626,33607461,33606758,33604209,33603125,33592496,33584920,33581928,33576275,33573354,33570790,33563966,33560971,33559385,33559175,33551395,33544841,33543539,33538942,33535461,33517174,33516151,33510764,33501768,33498717	Gene ID= ENSG00000163539.16 TPM= 4.78 Transcript Type= NA
chr3	33602413	33718242	33602413	33718242	-	transcript986.chr3.nic@CLASP2	transcript986.chr3.nic	protein_coding	33717808,33696855,33689829,33688277,33687060,33684359,33663445,33644757,33632292,33626988,33622135,33619603,33612001,33608567,33607384,33606591,33604154,33602952,33602413	33718242,33696933,33689932,33688368,33687135,33684456,33663515,33644903,33632371,33627080,33622280,33619738,33612071,33608626,33607461,33606758,33604209,33603125,33602589	Gene ID= ENSG00000163539.16 TPM= 6.72 Transcript Type= NA
chr3	33602189	33659119	33602189	33659119	-	transcript991.chr3.nic@CLASP2	transcript991.chr3.nic	protein_coding	33658974,33644757,33632292,33626988,33622135,33619603,33612001,33608567,33607384,33606591,33604154,33602189	33659119,33644903,33632371,33627080,33622280,33619738,33612071,33608626,33607461,33606758,33604209,33603125	Gene ID= ENSG00000163539.16 TPM= 2.12 Transcript Type= NA
chr3	33614673	33617095	33614673	33617095	+	transcript995.chr3.nnic@NA	transcript995.chr3.nnic	NA	33614673	33617095	Gene ID= novel_gene_chr3_996 TPM= 5.31 Transcript Type= NA
chr3	33795669	33799057	33795669	33799057	-	transcript1006.chr3.nnic@NA	transcript1006.chr3.nnic	NA	33795669	33799057	Gene ID= novel_gene_chr3_1007 TPM= 3.19 Transcript Type= NA
chr3	33798352	33869702	33798352	33869702	+	ENST00000307296.7@PDCD6IP	ENST00000307296.7	protein_coding	33798352,33812072,33813559,33821955,33825187,33826480,33828853,33836044,33838204,33841897,33844112,33845419,33852488,33853879,33855166,33864006,33865243,33866351	33798937,33812126,33813628,33822082,33825340,33826580,33828969,33836266,33838327,33842074,33844223,33845588,33852736,33854013,33855260,33864129,33865430,33869702	Gene ID= ENSG00000170248.13 TPM= 30.8 Transcript Type= protein_coding
chr3	36380344	36548007	36380344	36548007	+	ENST00000273183.7@STAC	ENST00000273183.7	protein_coding	36380344,36443364,36482992,36484977,36486134,36493151,36504393,36505746,36528696,36528848,36546191	36380754,36443640,36483092,36485058,36486249,36493229,36504457,36505834,36528747,36528985,36548007	Gene ID= ENSG00000144681.10 TPM= 1.06 Transcript Type= protein_coding
chr3	36985865	36986544	36985865	36986544	-	transcript1010.chr3.nnic@NA	transcript1010.chr3.nnic	NA	36985865	36986544	Gene ID= novel_gene_chr3_1011 TPM= 2.12 Transcript Type= NA
chr3	36989291	36993195	36989291	36993195	-	transcript1015.chr3.nnic@NA	transcript1015.chr3.nnic	NA	36989291	36993195	Gene ID= novel_gene_chr3_1016 TPM= 9.56 Transcript Type= NA
chr3	36993487	37050846	36993487	37050846	+	transcript1019.chr3.nnic@MLH1	transcript1019.chr3.nnic	protein_coding	36993487,36994830,36996619,37000955,37004401,37006991,37008814,37011820,37012011,37014432,37017506,37020310,37025637,37028784,37040186,37042268,37047519,37048517,37048904,37050486	36993663,36994953,36996709,37001053,37004474,37007063,37008905,37011862,37012099,37014544,37017599,37020463,37026007,37028932,37040294,37042331,37047683,37048609,37049017,37050846	Gene ID= ENSG00000076242.14 TPM= 4.25 Transcript Type= NA
chr3	36993332	37050918	36993332	37050918	+	ENST00000231790.6@MLH1	ENST00000231790.6	protein_coding	36993332,36996619,37000955,37004401,37006991,37008814,37011820,37012011,37014432,37017506,37020310,37025637,37028784,37040186,37042268,37047519,37048517,37048904,37050486	36993663,36996709,37001053,37004474,37007063,37008905,37011862,37012099,37014544,37017599,37020463,37026007,37028932,37040294,37042331,37047683,37048609,37049017,37050918	Gene ID= ENSG00000076242.14 TPM= 60.54 Transcript Type= protein_coding
chr3	36993777	37050842	36993777	37050842	+	ENST00000539477.5@MLH1	ENST00000539477.5	protein_coding	36993777,36996619,37000955,37004401,37006991,37011820,37012011,37014432,37017506,37020310,37025637,37028784,37040186,37042268,37047519,37048517,37048904,37050486	36993890,36996709,37001053,37004474,37007063,37011862,37012099,37014544,37017599,37020463,37026007,37028932,37040294,37042331,37047683,37048609,37049017,37050842	Gene ID= ENSG00000076242.14 TPM= 2.12 Transcript Type= protein_coding
chr3	36993492	37050846	36993492	37050846	+	transcript1030.chr3.nnic@MLH1	transcript1030.chr3.nnic	protein_coding	36993492,36996619,37000955,37004401,37006991,37008814,37011820,37012011,37028784,37040186,37042268,37047519,37048517,37048904,37050486	36993663,36996709,37001053,37004474,37007063,37008905,37011862,37012099,37028932,37040294,37042331,37047683,37048609,37049017,37050846	Gene ID= ENSG00000076242.14 TPM= 2.12 Transcript Type= NA
chr3	36993804	37050844	36993804	37050844	+	ENST00000435176.5@MLH1	ENST00000435176.5	protein_coding	36993804,36996619,37000955,37004401,37006991,37008814,37011820,37012011,37014432,37017506,37020310,37025637,37028784,37040186,37042268,37047519,37048517,37048904,37050486	36993890,36996709,37001048,37004474,37007063,37008905,37011862,37012099,37014544,37017599,37020463,37026007,37028932,37040294,37042331,37047683,37048609,37049017,37050844	Gene ID= ENSG00000076242.14 TPM= 9.56 Transcript Type= protein_coding
chr3	37053004	37176347	37053004	37176347	-	transcript1038.chr3.nic@LRRFIP2	transcript1038.chr3.nic	protein_coding	37176060,37174539,37148894,37129063,37127630,37121635,37121492,37115054,37112915,37110991,37109653,37109527,37108637,37108073,37105455,37102924,37096616,37094792,37091467,37083636,37075024,37072790,37066224,37065810,37063742,37058790,37055086,37054411,37053004	37176347,37174605,37149038,37129149,37127680,37121691,37121536,37115095,37112980,37111065,37109703,37109571,37108684,37108129,37105523,37103013,37096660,37094908,37091538,37083806,37075116,37072882,37066325,37065942,37063791,37058910,37055165,37054515,37053961	Gene ID= ENSG00000093167.17 TPM= 10.28 Transcript Type= NA
chr3	37053004	37176346	37053004	37176346	-	transcript1046.chr3.nnic@LRRFIP2	transcript1046.chr3.nnic	protein_coding	37175818,37174539,37148894,37129063,37127630,37121635,37121492,37115054,37112915,37110991,37109653,37108637,37108073,37105455,37102924,37096616,37094792,37091467,37083636,37075024,37072790,37066224,37065810,37063742,37058790,37055086,37054411,37053004	37176346,37174605,37149038,37129149,37127680,37121691,37121536,37115095,37112980,37111065,37109703,37108684,37108129,37105523,37103013,37096660,37094908,37091538,37083806,37075116,37072882,37066325,37065942,37063791,37058910,37055165,37054515,37053961	Gene ID= ENSG00000093167.17 TPM= 8.69 Transcript Type= NA
chr3	37053004	37176346	37053004	37176346	-	transcript1047.chr3.nnic@LRRFIP2	transcript1047.chr3.nnic	protein_coding	37176060,37174539,37148894,37129063,37127630,37121635,37121492,37115054,37112915,37110991,37109653,37108637,37108073,37105455,37102924,37096616,37094792,37091467,37083636,37075024,37072790,37066224,37065810,37063742,37058790,37055086,37054411,37053004	37176346,37174605,37149038,37129149,37127680,37121691,37121536,37115095,37112980,37111065,37109703,37108684,37108129,37105523,37103013,37096660,37094908,37091538,37083806,37075116,37072882,37066325,37065942,37063791,37058910,37055165,37054515,37053961	Gene ID= ENSG00000093167.17 TPM= 15.59 Transcript Type= NA
chr3	37053004	37176346	37053004	37176346	-	transcript1048.chr3.nnic@LRRFIP2	transcript1048.chr3.nnic	protein_coding	37176060,37174539,37148894,37129063,37127630,37121635,37121492,37115054,37112915,37110991,37109653,37109527,37108637,37108073,37105455,37096616,37094792,37091467,37083636,37075024,37072790,37066224,37065810,37063742,37058790,37055086,37054411,37053004	37176346,37174605,37149038,37129149,37127680,37121691,37121536,37115095,37112980,37111065,37109703,37109571,37108684,37108129,37105523,37096660,37094908,37091538,37083806,37075116,37072882,37066325,37065942,37063791,37058910,37055165,37054515,37053961	Gene ID= ENSG00000093167.17 TPM= 7.63 Transcript Type= NA
chr3	37052656	37176346	37052656	37176346	-	transcript1054.chr3.nnic@LRRFIP2	transcript1054.chr3.nnic	protein_coding	37176060,37174539,37148894,37129063,37127630,37121635,37121492,37115054,37112915,37110991,37109653,37108637,37108073,37105455,37096616,37094792,37091467,37083636,37075024,37072790,37066224,37065810,37063742,37058790,37055086,37054411,37052656	37176346,37174605,37149038,37129149,37127680,37121691,37121536,37115095,37112980,37111065,37109703,37108684,37108129,37105523,37096660,37094908,37091538,37083806,37075116,37072882,37066325,37065942,37063791,37058910,37055165,37054515,37053961	Gene ID= ENSG00000093167.17 TPM= 4.25 Transcript Type= NA
chr3	37053004	37176345	37053004	37176345	-	transcript1097.chr3.nic@LRRFIP2	transcript1097.chr3.nic	protein_coding	37176060,37174539,37148894,37129063,37096616,37094792,37091467,37083636,37075024,37072790,37066224,37065810,37063742,37058790,37055086,37054411,37053004	37176345,37174605,37149038,37129149,37096660,37094908,37091538,37083806,37075116,37072882,37066325,37065942,37063791,37058910,37055165,37054515,37053961	Gene ID= ENSG00000093167.17 TPM= 4.44 Transcript Type= NA
chr3	37120106	37176346	37120106	37176346	-	transcript1110.chr3.nic@LRRFIP2	transcript1110.chr3.nic	protein_coding	37176060,37174539,37148894,37129063,37127630,37121635,37120106	37176346,37174605,37149038,37129149,37127680,37121691,37121536	Gene ID= ENSG00000093167.17 TPM= 8.5 Transcript Type= NA
chr3	37169949	37176336	37169949	37176336	-	transcript1126.chr3.nnic@LRRFIP2	transcript1126.chr3.nnic	protein_coding	37176060,37174539,37169949	37176336,37174605,37173194	Gene ID= ENSG00000093167.17 TPM= 5.31 Transcript Type= NA
chr3	37053004	37176337	37053004	37176337	-	ENST00000421276.6@LRRFIP2	ENST00000421276.6	protein_coding	37176060,37174539,37148894,37129063,37096616,37094792,37091467,37083636,37075024,37065810,37063742,37058790,37055086,37054411,37053004	37176337,37174605,37149038,37129149,37096660,37094908,37091538,37083806,37075116,37065942,37063791,37058910,37055165,37054515,37053961	Gene ID= ENSG00000093167.17 TPM= 5.5 Transcript Type= protein_coding
chr3	37241789	37244177	37241789	37244177	-	ENST00000604992.1@AC097359.2	ENST00000604992.1	antisense_RNA	37241789	37244177	Gene ID= ENSG00000270194.1 TPM= 2.27 Transcript Type= antisense_RNA
chr3	37243250	37324750	37243250	37324750	+	transcript1150.chr3.nic@GOLGA4	transcript1150.chr3.nic	protein_coding	37243250,37251395,37266842,37273536,37281958,37286014,37289235,37294979,37296087,37298833,37299288,37302185,37315420,37319063,37321731,37323588	37243622,37251484,37266940,37273601,37282272,37286061,37289291,37295077,37296219,37299020,37299371,37302332,37315598,37319194,37321886,37324750	Gene ID= ENSG00000144674.16 TPM= 24.08 Transcript Type= NA
chr3	37243250	37324750	37243250	37324750	+	transcript1157.chr3.nnic@GOLGA4	transcript1157.chr3.nnic	protein_coding	37243250,37251395,37273536,37281958,37286014,37289235,37291719,37294979,37296087,37298833,37299288,37302185,37315420,37319063,37321731,37323588	37243622,37251484,37273601,37282272,37286061,37289291,37291751,37295077,37296219,37299020,37299371,37302332,37315598,37319194,37321886,37324750	Gene ID= ENSG00000144674.16 TPM= 4.96 Transcript Type= NA
chr3	37243250	37324750	37243250	37324750	+	transcript1159.chr3.nic@GOLGA4	transcript1159.chr3.nic	protein_coding	37243250,37251395,37266842,37273536,37281958,37289235,37294979,37296087,37298833,37299288,37302185,37315420,37319063,37321731,37323588	37243622,37251484,37266940,37273601,37282272,37289291,37295077,37296219,37299020,37299371,37302332,37315598,37319194,37321886,37324750	Gene ID= ENSG00000144674.16 TPM= 8.15 Transcript Type= NA
chr3	37243252	37366745	37243252	37366745	+	ENST00000356847.8@GOLGA4	ENST00000356847.8	protein_coding	37243252,37251395,37273536,37281958,37286014,37289235,37294979,37296087,37298833,37299288,37302185,37315420,37319063,37321731,37323588,37328416,37328963,37335053,37337666,37340124,37347193,37355101,37366080	37243622,37251484,37273601,37282272,37286061,37289291,37295077,37296219,37299020,37299371,37302332,37315598,37319194,37321886,37327825,37328537,37329093,37335166,37337734,37340199,37347296,37355187,37366745	Gene ID= ENSG00000144674.16 TPM= 11.28 Transcript Type= protein_coding
chr3	37243250	37324750	37243250	37324750	+	transcript1167.chr3.nic@GOLGA4	transcript1167.chr3.nic	protein_coding	37243250,37251395,37273536,37281958,37289235,37294979,37296087,37298833,37299288,37302185,37315420,37319063,37321731,37323588	37243622,37251484,37273601,37282272,37289291,37295077,37296219,37299020,37299371,37302332,37315598,37319194,37321886,37324750	Gene ID= ENSG00000144674.16 TPM= 6.02 Transcript Type= NA
chr3	37243177	37366751	37243177	37366751	+	ENST00000361924.6@GOLGA4	ENST00000361924.6	protein_coding	37243177,37251395,37281958,37286014,37289235,37294979,37296087,37298833,37299288,37302185,37315420,37319063,37321731,37323588,37328416,37328963,37335053,37337143,37337666,37340124,37347193,37355101,37361243,37366080	37243622,37251484,37282272,37286061,37289291,37295077,37296219,37299020,37299371,37302332,37315598,37319194,37321886,37327825,37328537,37329093,37335166,37337163,37337734,37340199,37347296,37355187,37361305,37366751	Gene ID= ENSG00000144674.16 TPM= 4.91 Transcript Type= protein_coding
chr3	37282183	37366750	37282183	37366750	+	ENST00000437131.1@GOLGA4	ENST00000437131.1	protein_coding	37282183,37286014,37289235,37294979,37296087,37298833,37299288,37302185,37315420,37319063,37321731,37323588,37328416,37328963,37335053,37337143,37337666,37340124,37347193,37355101,37366080	37282272,37286061,37289291,37295077,37296219,37299020,37299371,37302332,37315598,37319194,37321886,37327825,37328537,37329093,37335166,37337163,37337734,37340199,37347296,37355187,37366750	Gene ID= ENSG00000144674.16 TPM= 21.37 Transcript Type= protein_coding
chr3	37270204	37271525	37270204	37271525	-	transcript1188.chr3.nnic@NA	transcript1188.chr3.nnic	NA	37270204	37271525	Gene ID= novel_gene_chr3_1189 TPM= 2.12 Transcript Type= NA
chr3	37364594	37368680	37364594	37368680	-	transcript1190.chr3.nnic@NA	transcript1190.chr3.nnic	NA	37364594	37368680	Gene ID= novel_gene_chr3_1191 TPM= 7.44 Transcript Type= NA
chr3	37452119	37823514	37452119	37823514	+	ENST00000264741.9@ITGA9	ENST00000264741.9	protein_coding	37452119,37471007,37473354,37481484,37494501,37503178,37506000,37508559,37513763,37517504,37519260,37523521,37526026,37533314,37542425,37629187,37653714,37683865,37732712,37736904,37741730,37743926,37750462,37777392,37779902,37784977,37803823,37818891	37452559,37471134,37473460,37481607,37494568,37503307,37506085,37508627,37513900,37517609,37519354,37523611,37526071,37533468,37542585,37629336,37653790,37684015,37732798,37736983,37741819,37744034,37750569,37777517,37780021,37785078,37803942,37823514	Gene ID= ENSG00000144668.11 TPM= 51.16 Transcript Type= protein_coding
chr3	37452127	37751963	37452127	37751963	+	transcript1201.chr3.nic@ITGA9	transcript1201.chr3.nic	protein_coding	37452127,37471007,37473354,37481484,37494501,37503178,37506000,37508559,37513763,37517504,37519260,37523521,37526026,37533314,37542425,37629187,37653714,37683865,37732712,37736904,37741730,37743926,37750462	37452559,37471134,37473460,37481607,37494568,37503307,37506085,37508627,37513900,37517609,37519354,37523611,37526071,37533468,37542585,37629336,37653790,37684015,37732798,37736983,37741819,37744034,37751963	Gene ID= ENSG00000144668.11 TPM= 19.3 Transcript Type= NA
chr3	37452127	37501472	37452127	37501472	+	transcript1208.chr3.nnic@ITGA9	transcript1208.chr3.nnic	protein_coding	37452127,37471007,37473354,37481484,37494501,37500599	37452559,37471134,37473460,37481607,37494568,37501472	Gene ID= ENSG00000144668.11 TPM= 11.33 Transcript Type= NA
chr3	37485092	37488809	37485092	37488809	+	transcript1214.chr3.nnic@NA	transcript1214.chr3.nnic	NA	37485092	37488809	Gene ID= novel_gene_chr3_1215 TPM= 2.12 Transcript Type= NA
chr3	37490977	37494480	37490977	37494480	-	transcript1218.chr3.nnic@NA	transcript1218.chr3.nnic	NA	37490977	37494480	Gene ID= novel_gene_chr3_1219 TPM= 7.44 Transcript Type= NA
chr3	37606972	37609185	37606972	37609185	-	transcript1220.chr3.nnic@NA	transcript1220.chr3.nnic	NA	37606972	37609185	Gene ID= novel_gene_chr3_1221 TPM= 9.56 Transcript Type= NA
chr3	37787869	37789617	37787869	37789617	+	transcript1216.chr3.nnic@NA	transcript1216.chr3.nnic	NA	37787869	37789617	Gene ID= novel_gene_chr3_1217 TPM= 2.12 Transcript Type= NA
chr3	37809090	37811560	37809090	37811560	-	transcript1222.chr3.nnic@NA	transcript1222.chr3.nnic	NA	37809090	37811560	Gene ID= novel_gene_chr3_1223 TPM= 2.12 Transcript Type= NA
chr3	37861906	37981125	37861906	37981125	+	transcript1238.chr3.nnic@CTDSPL	transcript1238.chr3.nnic	protein_coding	37861906,37964571,37967826,37971407,37975709,37980742	37862278,37964672,37967882,37971499,37975894,37981125	Gene ID= ENSG00000144677.14 TPM= 3.19 Transcript Type= NA
chr3	37861960	37984469	37861960	37984469	+	ENST00000443503.6@CTDSPL	ENST00000443503.6	protein_coding	37861960,37947057,37964571,37967826,37971407,37975709,37980742	37862278,37947211,37964672,37967882,37971499,37975894,37984469	Gene ID= ENSG00000144677.14 TPM= 8.5 Transcript Type= protein_coding
chr3	38001806	38007185	38001806	38007185	+	transcript1240.chr3.nic@VILL	transcript1240.chr3.nic	protein_coding	38001806,38002396,38003168,38004255,38005792,38006181,38006449,38006942	38001860,38002575,38003313,38004399,38005974,38006252,38006700,38007185	Gene ID= ENSG00000136059.14 TPM= 2.12 Transcript Type= NA
chr3	38007498	38024787	38007498	38024787	-	ENST00000463876.5@PLCD1	ENST00000463876.5	protein_coding	38024337,38020188,38016491,38011544,38011214,38010361,38010131,38009904,38009653,38009272,38009042,38008458,38008235,38008014,38007498	38024787,38020352,38016719,38011673,38011445,38010562,38010275,38010053,38009811,38009431,38009158,38008636,38008367,38008163,38007858	Gene ID= ENSG00000187091.13 TPM= 6.37 Transcript Type= protein_coding
chr3	38007498	38029762	38007498	38029762	-	ENST00000334661.4@PLCD1	ENST00000334661.4	protein_coding	38029506,38020188,38016491,38011544,38011214,38010361,38010131,38009904,38009653,38009272,38009042,38008458,38008235,38008014,38007498	38029762,38020352,38016719,38011673,38011445,38010562,38010275,38010053,38009811,38009431,38009158,38008636,38008367,38008163,38007858	Gene ID= ENSG00000187091.13 TPM= 7.44 Transcript Type= protein_coding
chr3	38119548	38137148	38119548	38137148	-	transcript1247.chr3.nnic@ACAA1	transcript1247.chr3.nnic	protein_coding	38136865,38136592,38133952,38131926,38131596,38129290,38127786,38126510,38126162,38125826,38125565,38122713,38119548	38137148,38136685,38134009,38132005,38131638,38129388,38127866,38126700,38126341,38125881,38125710,38123122,38119555	Gene ID= ENSG00000060971.17 TPM= 7.44 Transcript Type= NA
chr3	38122711	38137100	38122711	38137100	-	transcript1253.chr3.nic@ACAA1	transcript1253.chr3.nic	protein_coding	38136865,38136592,38133952,38131926,38131596,38129290,38127786,38126162,38125826,38125565,38122711	38137100,38136685,38134009,38132005,38131638,38129388,38127866,38126700,38125881,38125710,38123122	Gene ID= ENSG00000060971.17 TPM= 6.5 Transcript Type= NA
chr3	38122711	38137162	38122711	38137162	-	transcript1254.chr3.nic@ACAA1	transcript1254.chr3.nic	protein_coding	38136865,38136592,38133952,38131926,38131596,38129290,38127786,38126510,38125826,38125565,38122711	38137162,38136685,38134009,38132005,38131638,38129388,38127866,38126700,38125881,38125710,38123122	Gene ID= ENSG00000060971.17 TPM= 9.69 Transcript Type= NA
chr3	38122710	38137242	38122710	38137242	-	ENST00000411549.5@ACAA1	ENST00000411549.5	protein_coding	38136865,38136592,38133952,38131926,38129290,38127786,38126162,38125826,38125565,38122710	38137242,38136685,38134009,38132005,38129388,38127866,38126700,38125881,38125710,38123122	Gene ID= ENSG00000060971.17 TPM= 3.31 Transcript Type= nonsense_mediated_decay
chr3	38122711	38137120	38122711	38137120	-	transcript1261.chr3.nic@ACAA1	transcript1261.chr3.nic	protein_coding	38136865,38136592,38133952,38131926,38129290,38127786,38125826,38125565,38122711	38137120,38136685,38134009,38132005,38129388,38127866,38126700,38125710,38123122	Gene ID= ENSG00000060971.17 TPM= 5.44 Transcript Type= NA
chr3	38122710	38137208	38122710	38137208	-	ENST00000333167.12@ACAA1	ENST00000333167.12	protein_coding	38136865,38136592,38133952,38131926,38131596,38129290,38127786,38126510,38126162,38125826,38125565,38122710	38137208,38136685,38134009,38132005,38131638,38129388,38127866,38126700,38126341,38125881,38125710,38123122	Gene ID= ENSG00000060971.17 TPM= 196.99 Transcript Type= protein_coding
chr3	38138478	38143022	38138478	38143022	+	ENST00000396334.7@MYD88	ENST00000396334.7	protein_coding	38138478,38139864,38140388,38140757,38141132	38139028,38139998,38140568,38140848,38143022	Gene ID= ENSG00000172936.12 TPM= 12.75 Transcript Type= protein_coding
chr3	38165505	38255488	38165505	38255488	+	ENST00000311806.7@OXSR1	ENST00000311806.7	protein_coding	38165505,38183003,38190731,38198722,38216096,38221578,38223812,38224571,38229687,38230365,38236839,38242743,38246075,38247668,38249966,38251403,38252328,38252817	38165946,38183115,38190839,38198863,38216151,38221687,38223913,38224704,38229735,38230430,38236961,38242778,38246221,38247732,38250018,38251471,38252392,38255488	Gene ID= ENSG00000172939.8 TPM= 30.8 Transcript Type= protein_coding
chr3	38453851	38493142	38453851	38493142	+	ENST00000352511.4@ACVR2B	ENST00000352511.4	protein_coding	38453851,38477287,38477861,38478141,38478375,38479128,38479678,38481351,38482198,38482430,38483138	38454374,38477494,38477970,38478292,38478518,38479271,38479826,38481465,38482336,38482560,38493142	Gene ID= ENSG00000114739.13 TPM= 3.19 Transcript Type= protein_coding
chr3	38496423	38525121	38496423	38525121	+	transcript1291.chr3.nnic@EXOG	transcript1291.chr3.nnic	protein_coding	38496423,38497629,38500090,38501355,38503615,38506854,38523901	38496530,38497684,38500164,38501494,38503691,38506968,38525121	Gene ID= ENSG00000157036.12 TPM= 2.47 Transcript Type= NA
chr3	38496477	38525121	38496477	38525121	+	transcript1293.chr3.nic@EXOG	transcript1293.chr3.nic	protein_coding	38496477,38497629,38500090,38501355,38503615,38506854,38523901	38496530,38497778,38500164,38501494,38503691,38506968,38525121	Gene ID= ENSG00000157036.12 TPM= 2.47 Transcript Type= NA
chr3	38496455	38525121	38496455	38525121	+	transcript1295.chr3.nic@EXOG	transcript1295.chr3.nic	protein_coding	38496455,38497629,38501355,38503615,38506854,38523901	38496530,38497684,38501494,38503691,38506968,38525121	Gene ID= ENSG00000157036.12 TPM= 2.47 Transcript Type= NA
chr3	38496272	38525951	38496272	38525951	+	ENST00000287675.9@EXOG	ENST00000287675.9	protein_coding	38496272,38497629,38501355,38503615,38506854,38523901	38496530,38497778,38501494,38503691,38506968,38525951	Gene ID= ENSG00000157036.12 TPM= 4.25 Transcript Type= protein_coding
chr3	38526725	38528268	38526725	38528268	-	transcript1303.chr3.nnic@NA	transcript1303.chr3.nnic	NA	38526725	38528268	Gene ID= novel_gene_chr3_1304 TPM= 36.11 Transcript Type= NA
chr3	38537285	38541420	38537285	38541420	+	transcript1305.chr3.nnic@NA	transcript1305.chr3.nnic	NA	38537285	38541420	Gene ID= novel_gene_chr3_1306 TPM= 7.44 Transcript Type= NA
chr3	38548066	38649699	38548066	38649699	-	transcript1307.chr3.nnic@SCN5A	transcript1307.chr3.nnic	protein_coding	38649531,38633035,38630311,38622400,38620843,38613743,38609734,38608151,38606669,38605951,38604729,38603712,38598918,38597729,38587400,38585691,38580931,38579334,38576661,38575297,38566409,38562415,38560147,38557231,38556437,38555656,38554279,38548066	38649699,38633359,38630429,38622489,38620971,38613834,38609964,38608214,38606810,38606148,38604908,38604083,38599050,38597967,38587573,38586041,38581371,38579492,38576781,38575451,38566582,38562537,38560428,38557284,38556578,38555760,38554549,38551558	Gene ID= ENSG00000183873.15 TPM= 76.13 Transcript Type= NA
chr3	38603210	38649699	38603210	38649699	-	transcript1312.chr3.nic@SCN5A	transcript1312.chr3.nic	protein_coding	38649531,38633035,38630311,38622400,38620843,38613743,38609734,38608151,38606669,38605951,38604729,38603210	38649699,38633359,38630429,38622489,38620971,38613834,38609964,38608214,38606810,38606148,38604908,38604083	Gene ID= ENSG00000183873.15 TPM= 7.79 Transcript Type= NA
chr3	38603210	38610079	38603210	38610079	-	transcript1314.chr3.nic@SCN5A	transcript1314.chr3.nic	protein_coding	38609734,38608151,38606669,38605951,38604729,38603210	38610079,38608214,38606810,38606148,38604908,38604083	Gene ID= ENSG00000183873.15 TPM= 2.12 Transcript Type= NA
chr3	38619747	38649699	38619747	38649699	-	transcript1316.chr3.nic@SCN5A	transcript1316.chr3.nic	protein_coding	38649531,38633035,38630311,38622400,38619747	38649699,38633359,38630429,38622489,38620971	Gene ID= ENSG00000183873.15 TPM= 5.66 Transcript Type= NA
chr3	38632830	38649699	38632830	38649699	-	transcript1319.chr3.nic@SCN5A	transcript1319.chr3.nic	protein_coding	38649531,38632830	38649699,38633359	Gene ID= ENSG00000183873.15 TPM= 14.87 Transcript Type= NA
chr3	38548062	38633362	38548062	38633362	-	ENST00000423572.6@SCN5A	ENST00000423572.6	protein_coding	38633035,38630311,38622400,38620843,38613743,38609734,38608151,38606669,38605951,38604729,38603712,38598918,38597729,38587400,38585691,38580931,38579334,38576661,38575297,38566409,38562415,38560147,38557231,38556441,38555656,38554279,38548062	38633362,38630429,38622489,38620971,38613834,38609964,38608214,38606810,38606148,38604908,38604083,38599050,38597967,38587573,38586041,38581371,38579492,38576781,38575451,38566582,38562537,38560428,38557284,38556578,38555760,38554549,38551558	Gene ID= ENSG00000183873.15 TPM= 88.34 Transcript Type= protein_coding
chr3	38548066	38649628	38548066	38649628	-	ENST00000333535.8@SCN5A	ENST00000333535.8	protein_coding	38649531,38633035,38630311,38622400,38620843,38613743,38609734,38608151,38606669,38605951,38604729,38603712,38598918,38597729,38587400,38585691,38580931,38579334,38576661,38575297,38566409,38562415,38560147,38557231,38556441,38555656,38554279,38548066	38649628,38633359,38630429,38622489,38620971,38613834,38609964,38608214,38606810,38606148,38604908,38604083,38599050,38597967,38587573,38586041,38581371,38579495,38576781,38575451,38566582,38562537,38560428,38557284,38556578,38555760,38554549,38551558	Gene ID= ENSG00000183873.15 TPM= 78.78 Transcript Type= protein_coding
chr3	38581140	38584937	38581140	38584937	+	transcript1320.chr3.nnic@NA	transcript1320.chr3.nnic	NA	38581140	38584937	Gene ID= novel_gene_chr3_1321 TPM= 6.37 Transcript Type= NA
chr3	38646096	38649677	38646096	38649677	-	transcript1324.chr3.nnic@NA	transcript1324.chr3.nnic	NA	38646096	38649677	Gene ID= novel_gene_chr3_1325 TPM= 3.19 Transcript Type= NA
chr3	39051998	39096388	39051998	39096388	+	ENST00000302313.9@WDR48	ENST00000302313.9	protein_coding	39051998,39063050,39065811,39066548,39066746,39068771,39069643,39074726,39077139,39078137,39079711,39084155,39084645,39085515,39088128,39089231,39091625,39093874,39094648	39052073,39063190,39065889,39066630,39066875,39068859,39069744,39074950,39077213,39078239,39079808,39084262,39084741,39085610,39088233,39089318,39091701,39094066,39096388	Gene ID= ENSG00000114742.13 TPM= 2.12 Transcript Type= protein_coding
chr3	39051996	39096664	39051996	39096664	+	transcript1333.chr3.nic@WDR48	transcript1333.chr3.nic	protein_coding	39051996,39063050,39065811,39066548,39068771,39069643,39074726,39077139,39078137,39079711,39084155,39084645,39085515,39088128,39089231,39091625,39093874,39094648	39052073,39063190,39065889,39066630,39068859,39069744,39074950,39077213,39078239,39079808,39084262,39084741,39085610,39088233,39089318,39091701,39094066,39096664	Gene ID= ENSG00000114742.13 TPM= 6.37 Transcript Type= NA
chr3	39096659	39108363	39096659	39108363	-	ENST00000319283.7@GORASP1	ENST00000319283.7	protein_coding	39107479,39103473,39102678,39101016,39100747,39100305,39099353,39098741,39096659	39108363,39103553,39102881,39101102,39100877,39100503,39099503,39098893,39098489	Gene ID= ENSG00000114745.13 TPM= 48.33 Transcript Type= protein_coding
chr3	39096668	39107638	39096668	39107638	-	ENST00000422110.6@GORASP1	ENST00000422110.6	protein_coding	39107479,39101016,39100305,39099353,39098741,39096668	39107638,39101102,39100454,39099503,39098893,39098489	Gene ID= ENSG00000114745.13 TPM= 7.97 Transcript Type= protein_coding
chr3	39107717	39119657	39107717	39119657	+	ENST00000479954.5@TTC21A	ENST00000479954.5	protein_coding	39107717,39109085,39110029,39110851,39112458,39114585,39118069	39107864,39109214,39110139,39111017,39112580,39114742,39119657	Gene ID= ENSG00000168026.18 TPM= 1.06 Transcript Type= retained_intron
chr3	39135548	39138900	39135548	39138900	+	transcript1351.chr3.nic@TTC21A	transcript1351.chr3.nic	protein_coding	39135548,39137195,39137486,39138267,39138556,39138711	39137060,39137387,39137710,39138387,39138623,39138900	Gene ID= ENSG00000168026.18 TPM= 2.12 Transcript Type= NA
chr3	39141855	39153575	39141855	39153575	-	ENST00000273153.9@CSRNP1	ENST00000273153.9	protein_coding	39153438,39146478,39144997,39144137,39141855	39153575,39146722,39145256,39144451,39144044	Gene ID= ENSG00000144655.14 TPM= 31.86 Transcript Type= protein_coding
chr3	39183210	39192601	39183210	39192601	-	transcript1359.chr3.nnic@XIRP1	transcript1359.chr3.nnic	protein_coding	39192446,39186089,39183210	39192601,39189449,39185661	Gene ID= ENSG00000168334.8 TPM= 243.59 Transcript Type= NA
chr3	39183210	39192596	39183210	39192596	-	ENST00000396251.1@XIRP1	ENST00000396251.1	protein_coding	39192446,39186089,39183210	39192596,39189525,39185661	Gene ID= ENSG00000168334.8 TPM= 301.47 Transcript Type= protein_coding
chr3	39183216	39192595	39183216	39192595	-	ENST00000421646.1@XIRP1	ENST00000421646.1	protein_coding	39192446,39183216	39192595,39185661	Gene ID= ENSG00000168334.8 TPM= 1079.16 Transcript Type= protein_coding
chr3	39183215	39192594	39183215	39192594	-	ENST00000340369.3@XIRP1	ENST00000340369.3	protein_coding	39192446,39183215	39192594,39189525	Gene ID= ENSG00000168334.8 TPM= 381.85 Transcript Type= protein_coding
chr3	39263494	39280034	39263494	39280034	-	ENST00000399220.2@CX3CR1	ENST00000399220.2	protein_coding	39279954,39263494	39280034,39266518	Gene ID= ENSG00000168329.13 TPM= 1.06 Transcript Type= protein_coding
chr3	39383348	39397351	39383348	39397351	+	ENST00000273158.8@SLC25A38	ENST00000273158.8	protein_coding	39383348,39389495,39390423,39391441,39391853,39394410,39396398	39383793,39389616,39390507,39391620,39392021,39394576,39397351	Gene ID= ENSG00000144659.10 TPM= 8.5 Transcript Type= protein_coding
chr3	39406689	39412542	39406689	39412542	+	ENST00000301821.10@RPSA	ENST00000301821.10	protein_coding	39406689,39407621,39408606,39410754,39411649,39411896,39412274	39406764,39407786,39408724,39410999,39411777,39412061,39412542	Gene ID= ENSG00000168028.13 TPM= 151.01 Transcript Type= protein_coding
chr3	39406972	39412438	39406972	39412438	+	transcript1377.chr3.nic@RPSA	transcript1377.chr3.nic	protein_coding	39406972,39407621,39408606,39410754,39411649,39411896,39412274	39407082,39407786,39408724,39410999,39411777,39412061,39412438	Gene ID= ENSG00000168028.13 TPM= 11.86 Transcript Type= NA
chr3	39406735	39412434	39406735	39412434	+	ENST00000443003.2@RPSA	ENST00000443003.2	protein_coding	39406735,39407621,39408606,39410754,39411649,39411896,39412274	39406764,39407786,39408739,39410999,39411777,39412061,39412434	Gene ID= ENSG00000168028.13 TPM= 147.29 Transcript Type= protein_coding
chr3	40309684	40312424	40309684	40312424	+	ENST00000232905.3@EIF1B	ENST00000232905.3	protein_coding	40309684,40310893,40311470,40311970	40309972,40311056,40311571,40312424	Gene ID= ENSG00000114784.3 TPM= 221.99 Transcript Type= protein_coding
chr3	40309707	40312395	40309707	40312395	+	transcript1399.chr3.nnic@NA	transcript1399.chr3.nnic	NA	40309707	40312395	Gene ID= novel_gene_chr3_1400 TPM= 2.12 Transcript Type= NA
chr3	40387156	40428619	40387156	40428619	+	ENST00000301825.7@ENTPD3	ENST00000301825.7	protein_coding	40387156,40388046,40392023,40400894,40411812,40414681,40415840,40422850,40423291,40423826,40427272	40387261,40388097,40392150,40401011,40411962,40414840,40416073,40423122,40423401,40423963,40428619	Gene ID= ENSG00000168032.8 TPM= 1.06 Transcript Type= protein_coding
chr3	40457354	40462280	40457354	40462280	+	ENST00000416518.1@RPL14	ENST00000416518.1	protein_coding	40457354,40457890,40458642,40461407,40461608,40461941	40457474,40457991,40458736,40461506,40461661,40462280	Gene ID= ENSG00000188846.13 TPM= 124.27 Transcript Type= protein_coding
chr3	40465656	40467015	40465656	40467015	+	transcript1410.chr3.nnic@NA	transcript1410.chr3.nnic	NA	40465656	40467015	Gene ID= novel_gene_chr3_1411 TPM= 2.12 Transcript Type= NA
chr3	40524885	40537696	40524885	40537696	+	ENST00000339296.9@ZNF621	ENST00000339296.9	protein_coding	40524885,40525779,40529319,40530209,40532030	40525274,40525864,40529445,40530316,40537696	Gene ID= ENSG00000172888.11 TPM= 2.12 Transcript Type= protein_coding
chr3	40524881	40533941	40524881	40533941	+	transcript1417.chr3.nic@ZNF621	transcript1417.chr3.nic	protein_coding	40524881,40525779,40529495,40530209,40532030	40525274,40525864,40529575,40530316,40533941	Gene ID= ENSG00000172888.11 TPM= 4.25 Transcript Type= NA
chr3	40537997	40539555	40537997	40539555	+	transcript1421.chr3.nnic@NA	transcript1421.chr3.nnic	NA	40537997	40539555	Gene ID= novel_gene_chr3_1422 TPM= 3.19 Transcript Type= NA
chr3	41199434	41240443	41199434	41240443	+	ENST00000396183.7@CTNNB1	ENST00000396183.7	protein_coding	41199434,41224021,41224526,41224954,41225334,41225660,41227208,41233341,41233529,41234139,41235724,41236349,41236588,41238016,41239134,41239819	41199670,41224081,41224753,41225207,41225572,41225861,41227352,41233444,41233867,41234297,41235843,41236499,41236709,41238076,41239354,41240443	Gene ID= ENSG00000168036.16 TPM= 45.32 Transcript Type= protein_coding
chr3	41199439	41240453	41199439	41240453	+	ENST00000349496.9@CTNNB1	ENST00000349496.9	protein_coding	41199439,41224021,41224526,41224954,41225334,41225660,41227208,41233341,41233529,41234139,41235724,41236349,41236588,41238016,41239134	41199670,41224081,41224753,41225207,41225572,41225861,41227352,41233444,41233867,41234297,41235843,41236499,41236709,41238076,41240453	Gene ID= ENSG00000168036.16 TPM= 34.7 Transcript Type= protein_coding
chr3	41199505	41240443	41199505	41240443	+	ENST00000396185.7@CTNNB1	ENST00000396185.7	protein_coding	41199505,41224021,41224526,41224954,41225334,41225660,41227208,41233341,41233529,41234139,41235724,41236349,41236588,41238016,41239134,41239660	41199670,41224081,41224753,41225207,41225572,41225861,41227352,41233444,41233867,41234297,41235843,41236499,41236709,41238076,41239354,41240443	Gene ID= ENSG00000168036.16 TPM= 13.46 Transcript Type= protein_coding
chr3	42013609	42210425	42013609	42210425	+	transcript1443.chr3.nic@TRAK1	transcript1443.chr3.nic	protein_coding	42013609,42087104,42125420,42176814,42184685,42188045,42189016,42191558,42193075,42193824,42194804,42199177,42200818,42202436,42209767	42014117,42087400,42125614,42176890,42184801,42188145,42189124,42191636,42193205,42193898,42194941,42199253,42201054,42202752,42210425	Gene ID= ENSG00000182606.14 TPM= 16.46 Transcript Type= NA
chr3	42013609	42204189	42013609	42204189	+	transcript1447.chr3.nic@TRAK1	transcript1447.chr3.nic	protein_coding	42013609,42087104,42125420,42176814,42184685,42188045,42189016,42191558,42193075,42193824,42194804,42199177,42200818,42202436	42014117,42087400,42125614,42176890,42184801,42188145,42189124,42191636,42193205,42193898,42194941,42199253,42201054,42204189	Gene ID= ENSG00000182606.14 TPM= 266.07 Transcript Type= NA
chr3	42185975	42187784	42185975	42187784	-	transcript1455.chr3.nnic@NA	transcript1455.chr3.nnic	NA	42185975	42187784	Gene ID= novel_gene_chr3_1456 TPM= 14.87 Transcript Type= NA
chr3	42213056	42216814	42213056	42216814	-	transcript1457.chr3.nnic@NA	transcript1457.chr3.nnic	NA	42213056	42216814	Gene ID= novel_gene_chr3_1458 TPM= 19.12 Transcript Type= NA
chr3	42547971	42582028	42547971	42582028	-	ENST00000273156.11@SEC22C	ENST00000273156.11	protein_coding	42581846,42568865,42563523,42561117,42557578,42555930,42547971	42582028,42569073,42563686,42561296,42557696,42555995,42548657	Gene ID= ENSG00000093183.13 TPM= 14.34 Transcript Type= protein_coding
chr3	42547971	42582304	42547971	42582304	-	transcript1463.chr3.nic@SEC22C	transcript1463.chr3.nic	protein_coding	42582193,42568865,42563523,42561117,42557578,42555930,42547971	42582304,42569073,42563686,42561296,42557696,42555995,42548657	Gene ID= ENSG00000093183.13 TPM= 3.72 Transcript Type= NA
chr3	42552924	42581962	42552924	42581962	-	ENST00000264454.7@SEC22C	ENST00000264454.7	protein_coding	42581846,42568865,42563523,42561117,42557578,42555930,42552924	42581962,42569073,42563686,42561296,42557696,42555995,42553448	Gene ID= ENSG00000093183.13 TPM= 5.31 Transcript Type= protein_coding
chr3	42590838	42594996	42590838	42594996	+	ENST00000011691.5@SS18L2	ENST00000011691.5	protein_coding	42590838,42591525,42594422	42590966,42591601,42594996	Gene ID= ENSG00000008324.11 TPM= 12.75 Transcript Type= protein_coding
chr3	42600471	42638681	42600471	42638681	+	transcript1481.chr3.nnic@NKTR	transcript1481.chr3.nnic	protein_coding	42600471,42600984,42617570,42619020,42619664,42621429,42630546,42631171,42632601,42633580,42634613,42635221,42636868	42600624,42601064,42617644,42619127,42619708,42621516,42630575,42631316,42632823,42633735,42634700,42635366,42638681	Gene ID= ENSG00000114857.17 TPM= 2.66 Transcript Type= NA
chr3	42600475	42638681	42600475	42638681	+	transcript1484.chr3.nic@NKTR	transcript1484.chr3.nic	protein_coding	42600475,42600984,42617570,42619020,42619664,42621429,42630546,42631171,42632601,42633580,42634613,42635221,42636868	42600778,42601064,42617644,42619127,42619708,42621516,42630575,42631316,42632823,42633735,42634700,42635366,42638681	Gene ID= ENSG00000114857.17 TPM= 2.66 Transcript Type= NA
chr3	42600645	42634756	42600645	42634756	+	transcript1487.chr3.nic@NKTR	transcript1487.chr3.nic	protein_coding	42600645,42600984,42617570,42619020,42619664,42621429,42630546,42631171,42632601,42633580,42634613	42600778,42601064,42617644,42619127,42619708,42621516,42630575,42631316,42632823,42633735,42634756	Gene ID= ENSG00000114857.17 TPM= 2.12 Transcript Type= NA
chr3	42638701	42648735	42638701	42648735	+	transcript1503.chr3.nic@NKTR	transcript1503.chr3.nic	protein_coding	42638701,42642501,42643339,42643902,42645888	42639750,42642596,42643395,42644003,42648735	Gene ID= ENSG00000114857.17 TPM= 9.56 Transcript Type= NA
chr3	42602669	42654388	42602669	42654388	-	transcript1498.chr3.nnic@AC006059.1	transcript1498.chr3.nnic	antisense_RNA	42653994,42632629,42623764,42612292,42607110,42602669	42654388,42632695,42623812,42612367,42607242,42603358	Gene ID= ENSG00000230084.5 TPM= 2.12 Transcript Type= NA
chr3	42611839	42654389	42611839	42654389	-	transcript1501.chr3.nnic@AC006059.1	transcript1501.chr3.nnic	antisense_RNA	42653994,42635234,42632629,42623764,42612292,42611839	42654389,42635335,42632695,42623812,42612367,42612099	Gene ID= ENSG00000230084.5 TPM= 2.12 Transcript Type= NA
chr3	42602669	42654388	42602669	42654388	-	transcript1504.chr3.nnic@AC006059.1	transcript1504.chr3.nnic	antisense_RNA	42653994,42623764,42612292,42607110,42602669	42654388,42623812,42612367,42607242,42603358	Gene ID= ENSG00000230084.5 TPM= 3.19 Transcript Type= NA
chr3	42632435	42654388	42632435	42654388	-	transcript1509.chr3.nnic@AC006059.1	transcript1509.chr3.nnic	antisense_RNA	42653994,42637773,42637089,42635234,42632435	42654388,42639665,42637373,42635335,42632695	Gene ID= ENSG00000230084.5 TPM= 2.66 Transcript Type= NA
chr3	42632565	42654388	42632565	42654388	-	transcript1510.chr3.nnic@AC006059.1	transcript1510.chr3.nnic	antisense_RNA	42653994,42637773,42637089,42635234,42632565	42654388,42639665,42637373,42635294,42632695	Gene ID= ENSG00000230084.5 TPM= 2.12 Transcript Type= NA
chr3	42602669	42654388	42602669	42654388	-	transcript1511.chr3.nnic@AC006059.1	transcript1511.chr3.nnic	antisense_RNA	42653994,42623764,42612292,42602669	42654388,42623812,42612367,42603358	Gene ID= ENSG00000230084.5 TPM= 3.19 Transcript Type= NA
chr3	42621413	42654389	42621413	42654389	-	transcript1514.chr3.nnic@AC006059.1	transcript1514.chr3.nnic	antisense_RNA	42653994,42635234,42632629,42621413	42654389,42635335,42632695,42623812	Gene ID= ENSG00000230084.5 TPM= 7.44 Transcript Type= NA
chr3	42621413	42654009	42621413	42654009	-	transcript1515.chr3.nnic@AC006059.1	transcript1515.chr3.nnic	antisense_RNA	42653994,42635234,42632629,42621413	42654009,42635335,42632753,42623812	Gene ID= ENSG00000230084.5 TPM= 2.12 Transcript Type= NA
chr3	42621413	42654388	42621413	42654388	-	transcript1522.chr3.nic@AC006059.1	transcript1522.chr3.nic	antisense_RNA	42653994,42632629,42621413	42654388,42632695,42623812	Gene ID= ENSG00000230084.5 TPM= 3.19 Transcript Type= NA
chr3	42621415	42654389	42621415	42654389	-	transcript1523.chr3.nnic@AC006059.1	transcript1523.chr3.nnic	antisense_RNA	42653994,42635234,42621415	42654389,42635335,42623812	Gene ID= ENSG00000230084.5 TPM= 2.12 Transcript Type= NA
chr3	42632435	42654388	42632435	42654388	-	transcript1526.chr3.nnic@AC006059.1	transcript1526.chr3.nnic	antisense_RNA	42653994,42635234,42632435	42654388,42635294,42632695	Gene ID= ENSG00000230084.5 TPM= 7.44 Transcript Type= NA
chr3	42632435	42654389	42632435	42654389	-	transcript1527.chr3.nnic@AC006059.1	transcript1527.chr3.nnic	antisense_RNA	42653994,42635234,42632435	42654389,42635335,42632695	Gene ID= ENSG00000230084.5 TPM= 18.59 Transcript Type= NA
chr3	42632568	42654326	42632568	42654326	-	ENST00000434363.1@AC006059.1	ENST00000434363.1	antisense_RNA	42653994,42632568	42654326,42632695	Gene ID= ENSG00000230084.5 TPM= 2.12 Transcript Type= antisense_RNA
chr3	42654470	42667578	42654470	42667578	+	transcript1492.chr3.nnic@ZBTB47	transcript1492.chr3.nnic	protein_coding	42654470,42658275,42661485,42663012,42663797,42664237	42654695,42659828,42661632,42663127,42663941,42667578	Gene ID= ENSG00000114853.13 TPM= 171.89 Transcript Type= NA
chr3	42653684	42665854	42653684	42665854	+	ENST00000232974.10@ZBTB47	ENST00000232974.10	protein_coding	42653684,42658275,42661485,42663012,42663797,42664237	42653883,42659828,42661632,42663127,42663941,42665854	Gene ID= ENSG00000114853.13 TPM= 25.84 Transcript Type= protein_coding
chr3	42685519	42692544	42685519	42692544	+	ENST00000287777.4@KLHL40	ENST00000287777.4	protein_coding	42685519,42688142,42688610,42688869,42690859,42691882	42686770,42688302,42688717,42689054,42691005,42692544	Gene ID= ENSG00000157119.11 TPM= 1.06 Transcript Type= protein_coding
chr3	42687321	42692440	42687321	42692440	+	transcript1545.chr3.nnic@KLHL40	transcript1545.chr3.nnic	protein_coding	42687321,42688142,42688610,42688869,42690859,42691882	42687368,42688302,42688717,42689054,42691005,42692440	Gene ID= ENSG00000157119.11 TPM= 2.12 Transcript Type= NA
chr3	42692663	42701521	42692663	42701521	-	ENST00000310417.9@HHATL	ENST00000310417.9	protein_coding	42701467,42701112,42700721,42699758,42699032,42698708,42698142,42697508,42697001,42696842,42693617,42693077,42692663	42701521,42701190,42700839,42699825,42699145,42698902,42698351,42697679,42697145,42696877,42693818,42693218,42692875	Gene ID= ENSG00000010282.14 TPM= 23.9 Transcript Type= protein_coding
chr3	42692663	42702827	42692663	42702827	-	ENST00000441594.5@HHATL	ENST00000441594.5	protein_coding	42702579,42700721,42699758,42699032,42698708,42698142,42697508,42697001,42696842,42693617,42693077,42692663	42702827,42700839,42699825,42699145,42698902,42698351,42697679,42697145,42696877,42693818,42693218,42692875	Gene ID= ENSG00000010282.14 TPM= 357.63 Transcript Type= protein_coding
chr3	42692663	42697099	42692663	42697099	-	ENST00000426666.5@HHATL	ENST00000426666.5	protein_coding	42697001,42696842,42693077,42692663	42697099,42696877,42693189,42692875	Gene ID= ENSG00000010282.14 TPM= 31.19 Transcript Type= protein_coding
chr3	42719365	42723135	42719365	42723135	+	transcript1592.chr3.nnic@NA	transcript1592.chr3.nnic	NA	42719365,42721528,42722149	42719633,42721650,42723135	Gene ID= novel_gene_chr3_1593 TPM= 3.19 Transcript Type= NA
chr3	42784298	42804531	42784298	42804531	-	ENST00000321331.11@HIGD1A	ENST00000321331.11	protein_coding	42804436,42794157,42786028,42784298	42804531,42794275,42786162,42785320	Gene ID= ENSG00000181061.13 TPM= 716.96 Transcript Type= protein_coding
chr3	42784330	42804488	42784330	42804488	-	ENST00000418900.6@HIGD1A	ENST00000418900.6	protein_coding	42804436,42794157,42786028,42784330	42804488,42794299,42786162,42785320	Gene ID= ENSG00000181061.13 TPM= 5.84 Transcript Type= protein_coding
chr3	42936360	42942792	42936360	42942792	+	ENST00000383748.8@KRBOX1	ENST00000383748.8	protein_coding	42936360,42938850,42941226,42941958,42942538	42936455,42938931,42941352,42942071,42942792	Gene ID= ENSG00000240747.7 TPM= 1.06 Transcript Type= protein_coding
chr3	43079234	43106076	43079234	43106076	-	ENST00000344697.2@POMGNT2	ENST00000344697.2	protein_coding	43105836,43079234	43106076,43081536	Gene ID= ENSG00000144647.5 TPM= 25.49 Transcript Type= protein_coding
chr3	43286540	43351138	43286540	43351138	+	ENST00000296088.11@SNRK	ENST00000296088.11	protein_coding	43286540,43299754,43303098,43332169,43340287,43343344,43347339	43286675,43299815,43303792,43332310,43340499,43343478,43351138	Gene ID= ENSG00000163788.13 TPM= 8.5 Transcript Type= protein_coding
chr3	43286538	43351143	43286538	43351143	+	ENST00000429705.6@SNRK	ENST00000429705.6	protein_coding	43286538,43303098,43332169,43340287,43343344,43347339	43286675,43303792,43332310,43340499,43343478,43351143	Gene ID= ENSG00000163788.13 TPM= 9.56 Transcript Type= protein_coding
chr3	43365848	43622068	43365848	43622068	-	ENST00000292246.7@ANO10	ENST00000292246.7	protein_coding	43621909,43605714,43600384,43598532,43580353,43576692,43574809,43565653,43561220,43555278,43549720,43432611,43365848	43622068,43605863,43600581,43598666,43580472,43577261,43574864,43565727,43561402,43555469,43549848,43432727,43366974	Gene ID= ENSG00000160746.12 TPM= 13.81 Transcript Type= protein_coding
chr3	43366359	43621984	43366359	43621984	-	ENST00000396091.7@ANO10	ENST00000396091.7	protein_coding	43621909,43605714,43598532,43580353,43576692,43574809,43565653,43561220,43555278,43549720,43432611,43366359	43621984,43605863,43598666,43580472,43577261,43574864,43565727,43561402,43555469,43549848,43432727,43366974	Gene ID= ENSG00000160746.12 TPM= 3.19 Transcript Type= protein_coding
chr3	43690870	43719049	43690870	43719049	+	ENST00000458276.6@ABHD5	ENST00000458276.6	protein_coding	43690870,43699276,43702215,43711709,43714947,43717671,43718443	43691039,43699361,43702587,43711863,43715058,43717857,43719049	Gene ID= ENSG00000011198.7 TPM= 10.62 Transcript Type= protein_coding
chr3	44338129	44409451	44338129	44409451	+	transcript1640.chr3.nic@TCAIM	transcript1640.chr3.nic	protein_coding	44338129,44354739,44357741,44361365,44367532,44392855,44396400,44396743,44400355,44401203,44407442	44338319,44354811,44357876,44361518,44367708,44392977,44396497,44396834,44400587,44401334,44409451	Gene ID= ENSG00000179152.19 TPM= 3.19 Transcript Type= NA
chr3	44338119	44359804	44338119	44359804	+	ENST00000383746.7@TCAIM	ENST00000383746.7	protein_coding	44338119,44354739,44357741,44358217	44338319,44354811,44357876,44359804	Gene ID= ENSG00000179152.19 TPM= 3.72 Transcript Type= protein_coding
chr3	44338452	44359802	44338452	44359802	+	ENST00000396078.7@TCAIM	ENST00000396078.7	protein_coding	44338452,44354739,44357741,44358217	44338834,44354811,44357876,44359802	Gene ID= ENSG00000179152.19 TPM= 17.53 Transcript Type= protein_coding
chr3	44338452	44409451	44338452	44409451	+	ENST00000342649.8@TCAIM	ENST00000342649.8	protein_coding	44338452,44354739,44357741,44361365,44367456,44392855,44396400,44396743,44400355,44401203,44407442	44338834,44354811,44357876,44361518,44367708,44392977,44396497,44396834,44400587,44401334,44409451	Gene ID= ENSG00000179152.19 TPM= 14.87 Transcript Type= protein_coding
chr3	44338757	44409451	44338757	44409451	+	ENST00000412611.6@TCAIM	ENST00000412611.6	protein_coding	44338757,44354739,44357741,44361365,44367532,44392855,44396400,44396743,44400355,44401203,44407442	44338834,44354811,44357876,44361518,44367708,44392977,44396497,44396834,44400587,44401334,44409451	Gene ID= ENSG00000179152.19 TPM= 6.37 Transcript Type= nonsense_mediated_decay
chr3	44338752	44367879	44338752	44367879	+	ENST00000462230.5@TCAIM	ENST00000462230.5	protein_coding	44338752,44354739,44357741,44361365,44367532	44338834,44354811,44357876,44361518,44367879	Gene ID= ENSG00000179152.19 TPM= 1.06 Transcript Type= retained_intron
chr3	44392343	44392548	44392343	44392548	-	transcript1650.chr3.nnic@NA	transcript1650.chr3.nnic	NA	44392343	44392548	Gene ID= novel_gene_chr3_1651 TPM= 2.12 Transcript Type= NA
chr3	44431720	44477670	44431720	44477670	-	ENST00000396077.7@ZNF445	ENST00000396077.7	protein_coding	44477591,44458244,44455121,44451314,44450868,44450447,44449513,44431720	44477670,44458364,44455696,44451482,44450962,44450573,44449623,44448739	Gene ID= ENSG00000185219.16 TPM= 4.25 Transcript Type= protein_coding
chr3	44553112	44555439	44553112	44555439	-	transcript1659.chr3.nnic@NA	transcript1659.chr3.nnic	NA	44553112	44555439	Gene ID= novel_gene_chr3_1660 TPM= 3.19 Transcript Type= NA
chr3	44555193	44583445	44555193	44583445	+	ENST00000431636.5@ZKSCAN7	ENST00000431636.5	protein_coding	44555193,44556930,44565487,44567912,44568307,44582972	44555481,44557470,44565655,44568003,44568433,44583445	Gene ID= ENSG00000196345.12 TPM= 1.06 Transcript Type= protein_coding
chr3	44648727	44660789	44648727	44660789	+	ENST00000396056.6@ZNF35	ENST00000396056.6	protein_coding	44648727,44650941,44652557,44658701	44648834,44651259,44652701,44660789	Gene ID= ENSG00000169981.10 TPM= 5.31 Transcript Type= protein_coding
chr3	44648742	44660791	44648742	44660791	+	ENST00000296092.7@ZNF35	ENST00000296092.7	protein_coding	44648742,44650941,44658701	44648834,44651259,44660791	Gene ID= ENSG00000169981.10 TPM= 4.25 Transcript Type= protein_coding
chr3	44712646	44722977	44712646	44722977	+	ENST00000436624.6@ZNF502	ENST00000436624.6	protein_coding	44712646,44720203,44720873	44712740,44720316,44722977	Gene ID= ENSG00000196653.11 TPM= 1.06 Transcript Type= protein_coding
chr3	44729596	44737083	44729596	44737083	+	ENST00000396048.6@ZNF501	ENST00000396048.6	protein_coding	44729596,44731476,44734197	44729722,44731560,44737083	Gene ID= ENSG00000186446.11 TPM= 1.06 Transcript Type= protein_coding
chr3	44748744	44761662	44748744	44761662	-	ENST00000296121.5@KIAA1143	ENST00000296121.5	protein_coding	44761495,44754224,44748744	44761662,44754368,44753552	Gene ID= ENSG00000163807.5 TPM= 11.68 Transcript Type= protein_coding
chr3	44861869	44865670	44861869	44865670	+	ENST00000302392.4@TMEM42	ENST00000302392.4	protein_coding	44861869,44864197,44865040	44862116,44864343,44865670	Gene ID= ENSG00000169964.7 TPM= 10.62 Transcript Type= protein_coding
chr3	44925171	44930800	44925171	44930800	-	transcript1692.chr3.nic@ZDHHC3	transcript1692.chr3.nic	protein_coding	44929306,44925171	44930800,44926847	Gene ID= ENSG00000163812.13 TPM= 2.66 Transcript Type= NA
chr3	44925171	44976177	44925171	44976177	-	ENST00000424952.6@ZDHHC3	ENST00000424952.6	protein_coding	44975933,44959131,44945168,44933888,44933118,44929306,44925171	44976177,44959460,44945292,44933984,44933199,44929436,44926847	Gene ID= ENSG00000163812.13 TPM= 28.15 Transcript Type= protein_coding
chr3	44976230	45011470	44976230	45011470	+	ENST00000265564.7@EXOSC7	ENST00000265564.7	protein_coding	44976230,44989140,44989550,44997087,45001538,45005291,45007420,45011235	44976334,44989241,44989644,44997252,45001608,45005414,45007575,45011470	Gene ID= ENSG00000075914.12 TPM= 22.31 Transcript Type= protein_coding
chr3	44976264	45012633	44976264	45012633	+	ENST00000491476.5@EXOSC7	ENST00000491476.5	protein_coding	44976264,44989140,44989550,44997087,45001538,45005291,45007420,45011235,45012183	44976334,44989241,44989644,44997252,45001608,45005414,45007575,45011393,45012633	Gene ID= ENSG00000075914.12 TPM= 9.56 Transcript Type= processed_transcript
chr3	45026183	45036071	45026183	45036071	+	ENST00000296130.4@CLEC3B	ENST00000296130.4	protein_coding	45026183,45030827,45035524	45026471,45030925,45036071	Gene ID= ENSG00000163815.5 TPM= 110.46 Transcript Type= protein_coding
chr3	45224466	45226278	45224466	45226278	-	ENST00000503771.1@TMEM158	ENST00000503771.1	protein_coding	45224466	45226278	Gene ID= ENSG00000249992.1 TPM= 2.12 Transcript Type= protein_coding
chr3	45388506	45548837	45388506	45548837	+	ENST00000265537.7@LARS2	ENST00000265537.7	protein_coding	45388506,45391583,45394433,45400245,45417482,45419669,45446891,45458743,45474243,45476468,45485692,45488697,45491517,45496275,45500442,45513135,45516094,45517903,45520219,45523997,45541829,45547351	45388680,45391648,45394687,45400373,45417573,45419729,45446980,45458886,45474350,45476627,45485796,45488812,45491800,45496373,45500579,45513235,45516276,45518072,45520296,45524108,45541956,45548837	Gene ID= ENSG00000011376.9 TPM= 16.99 Transcript Type= protein_coding
chr3	45689262	45745424	45689262	45745424	+	ENST00000389061.9@SACM1L	ENST00000389061.9	protein_coding	45689262,45703438,45705135,45706780,45709498,45713137,45714046,45719500,45722000,45722869,45723475,45731301,45732053,45735235,45737583,45737772,45738578,45738781,45739587,45743533	45689497,45703535,45705209,45706907,45709647,45713196,45714079,45719601,45722085,45722955,45723543,45731380,45732151,45735373,45737652,45737844,45738671,45738873,45739644,45745424	Gene ID= ENSG00000211456.10 TPM= 30.8 Transcript Type= protein_coding
chr3	45823316	45842166	45823316	45842166	-	ENST00000296135.10@LZTFL1	ENST00000296135.10	protein_coding	45841989,45837927,45835590,45834238,45833050,45831073,45830913,45828439,45827356,45823316	45842166,45838051,45835784,45834298,45833121,45831138,45830990,45828615,45827459,45826332	Gene ID= ENSG00000163818.16 TPM= 1.06 Transcript Type= protein_coding
chr3	45917904	45958572	45917904	45958572	-	ENST00000433878.5@FYCO1	ENST00000433878.5	protein_coding	45958408,45955249,45936448,45931071,45923656,45919413,45917904	45958572,45955393,45936543,45931281,45923765,45921840,45919065	Gene ID= ENSG00000163820.14 TPM= 19.12 Transcript Type= protein_coding
chr3	45917904	45995815	45917904	45995815	-	ENST00000296137.6@FYCO1	ENST00000296137.6	protein_coding	45995722,45984856,45981570,45979705,45975239,45973088,45969675,45966277,45965033,45964336,45962225,45959393,45958408,45955249,45936448,45931071,45923656,45917904	45995815,45985022,45981676,45979830,45975345,45973231,45969765,45968703,45965125,45964454,45962392,45959542,45958619,45955393,45936543,45931281,45923765,45921840	Gene ID= ENSG00000163820.14 TPM= 123.21 Transcript Type= protein_coding
chr3	46436019	46463671	46436019	46463671	-	ENST00000426532.6@LTF	ENST00000426532.6	protein_coding	46463444,46459656,46456290,46455796,46455295,46454305,46450495,46449854,46448863,46447308,46446440,46445281,46443441,46441416,46439296,46437940,46436019	46463671,46459819,46456398,46455978,46455442,46454360,46450673,46450028,46449017,46447398,46446493,46445436,46443582,46441483,46439480,46438129,46436229	Gene ID= ENSG00000012223.12 TPM= 1.06 Transcript Type= protein_coding
chr3	46435645	46465163	46435645	46465163	-	ENST00000231751.8@LTF	ENST00000231751.8	protein_coding	46464825,46459656,46456290,46455796,46455295,46454305,46450495,46449854,46448863,46447308,46446440,46445281,46443441,46441416,46439296,46437940,46435645	46465163,46459819,46456398,46455978,46455442,46454360,46450673,46450028,46449017,46447398,46446493,46445436,46443582,46441483,46439480,46438129,46436229	Gene ID= ENSG00000012223.12 TPM= 1.06 Transcript Type= protein_coding
chr3	46515423	46566550	46515423	46566550	-	ENST00000395905.7@LRRC2	ENST00000395905.7	protein_coding	46566177,46551467,46545046,46539045,46532773,46529905,46527426,46521522,46515423	46566550,46551610,46545253,46539201,46532909,46530050,46527581,46521658,46519063	Gene ID= ENSG00000163827.12 TPM= 43.55 Transcript Type= protein_coding
chr3	46556135	46561047	46556135	46561047	-	transcript1752.chr3.nnic@NA	transcript1752.chr3.nnic	NA	46556135	46561047	Gene ID= novel_gene_chr3_1753 TPM= 2.12 Transcript Type= NA
chr3	46669189	46693701	46669189	46693701	-	ENST00000318962.8@ALS2CL	ENST00000318962.8	protein_coding	46693643,46689338,46688098,46687619,46686983,46686308,46685525,46683989,46683782,46683130,46682029,46681500,46681246,46680430,46679210,46678259,46676849,46676642,46676245,46675618,46674566,46673339,46672140,46671884,46671488,46669189	46693701,46689465,46688296,46687684,46687148,46686439,46685644,46684047,46683848,46683326,46682094,46681598,46681407,46680541,46679287,46678389,46677022,46676738,46676402,46675686,46674739,46673381,46672201,46672033,46671584,46671064	Gene ID= ENSG00000178038.16 TPM= 14.87 Transcript Type= protein_coding
chr3	46673694	46678013	46673694	46678013	+	transcript1771.chr3.nnic@NA	transcript1771.chr3.nnic	NA	46673694	46678013	Gene ID= novel_gene_chr3_1772 TPM= 7.44 Transcript Type= NA
chr3	46691724	46693698	46691724	46693698	-	transcript1773.chr3.nnic@NA	transcript1773.chr3.nnic	NA	46691724	46693698	Gene ID= novel_gene_chr3_1774 TPM= 7.44 Transcript Type= NA
chr3	46693782	46710886	46693782	46710886	+	transcript1768.chr3.nnic@TMIE	transcript1768.chr3.nnic	protein_coding	46693782,46705790,46709126,46709579	46694618,46705907,46709275,46710886	Gene ID= ENSG00000181585.3 TPM= 2.12 Transcript Type= NA
chr3	46805058	46808446	46805058	46808446	+	transcript1811.chr3.nnic@NA	transcript1811.chr3.nnic	NA	46805058	46808446	Gene ID= novel_gene_chr3_1812 TPM= 59.48 Transcript Type= NA
chr3	46808634	46814567	46808634	46814567	-	transcript1808.chr3.nic@PRSS44	transcript1808.chr3.nic	transcribed_unprocessed_pseudogene	46812222,46811106,46808634	46814567,46811873,46809589	Gene ID= ENSG00000226074.4 TPM= 3.19 Transcript Type= NA
chr3	46835111	46863507	46835111	46863507	-	transcript1785.chr3.nnic@MYL3	transcript1785.chr3.nnic	protein_coding	46863262,46860960,46860676,46859475,46858384,46858231,46835111	46863507,46860987,46860825,46859648,46858461,46858272,46836203	Gene ID= ENSG00000160808.9 TPM= 84.97 Transcript Type= NA
chr3	46857872	46863483	46857872	46863483	-	ENST00000292327.4@MYL3	ENST00000292327.4	protein_coding	46863262,46860960,46860676,46859475,46858384,46858231,46857872	46863483,46860987,46860825,46859648,46858461,46858272,46858101	Gene ID= ENSG00000160808.9 TPM= 1610.75 Transcript Type= protein_coding
chr3	46857872	46863442	46857872	46863442	-	ENST00000395869.5@MYL3	ENST00000395869.5	protein_coding	46863262,46860960,46860676,46859475,46858384,46857872	46863442,46860987,46860825,46859648,46858461,46858272	Gene ID= ENSG00000160808.9 TPM= 393.87 Transcript Type= protein_coding
chr3	46848012	46853633	46848012	46853633	-	transcript1815.chr3.nnic@NA	transcript1815.chr3.nnic	NA	46848012	46853633	Gene ID= novel_gene_chr3_1816 TPM= 39.3 Transcript Type= NA
chr3	46860079	46863459	46860079	46863459	-	transcript1817.chr3.nnic@NA	transcript1817.chr3.nnic	NA	46860079	46863459	Gene ID= novel_gene_chr3_1818 TPM= 47.8 Transcript Type= NA
chr3	46882216	46903794	46882216	46903794	+	transcript1837.chr3.nnic@PTH1R	transcript1837.chr3.nnic	protein_coding	46882216,46883512,46895735,46897855,46898074,46898378,46898662,46899303,46901025,46901414,46901766,46902526,46902749,46903270	46882464,46883634,46895869,46897965,46898192,46898472,46898857,46899456,46901085,46901480,46901860,46902667,46902790,46903794	Gene ID= ENSG00000160801.13 TPM= 2.47 Transcript Type= NA
chr3	46883357	46903794	46883357	46903794	+	ENST00000313049.9@PTH1R	ENST00000313049.9	protein_coding	46883357,46893907,46895735,46897855,46898074,46898378,46898662,46899303,46901025,46901414,46901766,46902526,46902749,46903270	46883634,46894009,46895869,46897965,46898192,46898472,46898857,46899456,46901085,46901480,46901860,46902667,46902790,46903794	Gene ID= ENSG00000160801.13 TPM= 1.41 Transcript Type= protein_coding
chr3	46892707	46903794	46892707	46903794	+	transcript1840.chr3.nic@PTH1R	transcript1840.chr3.nic	protein_coding	46892707,46893907,46895735,46897855,46898074,46898378,46898662,46899303,46901025,46901414,46901766,46902526,46902749,46903270	46892815,46894009,46895869,46897965,46898192,46898472,46898857,46899456,46901085,46901480,46901860,46902667,46902790,46903794	Gene ID= ENSG00000160801.13 TPM= 3.54 Transcript Type= NA
chr3	46894076	46894904	46894076	46894904	+	transcript1846.chr3.nnic@NA	transcript1846.chr3.nnic	NA	46894076	46894904	Gene ID= novel_gene_chr3_1847 TPM= 2.12 Transcript Type= NA
chr3	46921748	46924159	46921748	46924159	-	ENST00000604367.1@CCDC12	ENST00000604367.1	protein_coding	46921748	46924159	Gene ID= ENSG00000160799.11 TPM= 2.12 Transcript Type= retained_intron
chr3	46979683	47009703	46979683	47009703	+	ENST00000450053.7@NBEAL2	ENST00000450053.7	protein_coding	46979683,46988669,46988842,46989085,46989260,46989511,46991219,46991406,46991840,46992475,46993937,46994455,46995032,46995714,46995932,46996271,46996751,46996954,46997259,46997561,46998067,46998463,46998717,46998959,46999315,46999630,46999889,47001001,47001279,47001689,47001920,47002371,47002645,47002957,47003174,47003816,47004077,47004495,47004972,47005181,47005489,47005738,47005946,47006165,47006333,47007066,47007241,47007525,47007816,47008070,47008283,47008520,47008989,47009219	46979912,46988757,46988970,46989166,46989381,46989593,46991304,46991688,46991946,46992555,46994020,46994553,46995633,46995846,46996051,46996592,46996833,46997046,46997433,46997694,46998226,46998565,46998879,46999117,46999474,46999715,47000404,47001179,47001438,47001826,47002288,47002520,47002802,47003081,47003309,47003976,47004393,47004590,47005096,47005321,47005619,47005847,47006063,47006262,47006449,47007155,47007350,47007697,47007910,47008186,47008441,47008668,47009124,47009703	Gene ID= ENSG00000160796.16 TPM= 7.44 Transcript Type= protein_coding
chr3	47120183	47164080	47120183	47164080	-	transcript1859.chr3.nic@SETD2	transcript1859.chr3.nic	protein_coding	47163854,47126648,47120183	47164080,47126663,47124548	Gene ID= ENSG00000181555.20 TPM= 2.12 Transcript Type= NA
chr3	47133878	47137349	47133878	47137349	+	transcript1863.chr3.nnic@NA	transcript1863.chr3.nnic	NA	47133878	47137349	Gene ID= novel_gene_chr3_1864 TPM= 2.12 Transcript Type= NA
chr3	47275228	47282766	47275228	47282766	-	ENST00000432493.5@KIF9	ENST00000432493.5	protein_coding	47282495,47277282,47275228	47282766,47277379,47275490	Gene ID= ENSG00000088727.12 TPM= 14.87 Transcript Type= protein_coding
chr3	47282947	47344635	47282947	47344635	+	transcript1866.chr3.nnic@KLHL18	transcript1866.chr3.nnic	protein_coding	47282947,47319653,47322568,47329951,47333157,47334683,47336520,47340572,47342719,47343555	47283094,47319783,47322708,47330149,47333317,47334819,47336757,47340676,47342830,47344635	Gene ID= ENSG00000114648.11 TPM= 4.25 Transcript Type= NA
chr3	47282946	47346816	47282946	47346816	+	ENST00000232766.5@KLHL18	ENST00000232766.5	protein_coding	47282946,47319653,47322568,47329951,47333157,47334683,47336535,47340572,47342719,47343555	47283094,47319783,47322708,47330149,47333317,47334819,47336757,47340676,47342830,47346816	Gene ID= ENSG00000114648.11 TPM= 18.06 Transcript Type= protein_coding
chr3	47282959	47287458	47282959	47287458	+	ENST00000483201.1@KLHL18	ENST00000483201.1	protein_coding	47282959,47287220	47283094,47287458	Gene ID= ENSG00000114648.11 TPM= 20.18 Transcript Type= processed_transcript
chr3	47410814	47413435	47410814	47413435	+	transcript1888.chr3.nic@PTPN23	transcript1888.chr3.nic	protein_coding	47410814,47411783,47412094,47412283,47412514,47412706	47411686,47411967,47412198,47412421,47412627,47413435	Gene ID= ENSG00000076201.14 TPM= 12.21 Transcript Type= NA
chr3	47411026	47413435	47411026	47413435	+	transcript1889.chr3.nic@PTPN23	transcript1889.chr3.nic	protein_coding	47411026,47411783,47412094,47412283,47412514	47411686,47411967,47412198,47412421,47413435	Gene ID= ENSG00000076201.14 TPM= 3.72 Transcript Type= NA
chr3	47413713	47476113	47413713	47476113	-	ENST00000265565.9@SCAP	ENST00000265565.9	protein_coding	47475799,47442872,47435008,47428513,47427447,47427157,47425997,47425485,47423933,47422442,47420931,47420554,47419328,47418655,47418321,47418134,47417304,47417122,47415098,47414827,47414572,47414180,47413713	47476113,47443091,47435137,47428670,47427667,47427262,47426169,47425611,47424045,47422536,47421029,47420772,47419704,47418843,47418522,47418249,47417826,47417207,47415180,47414993,47414652,47414386,47414099	Gene ID= ENSG00000114650.18 TPM= 7.97 Transcript Type= protein_coding
chr3	47413713	47476003	47413713	47476003	-	transcript1884.chr3.nic@SCAP	transcript1884.chr3.nic	protein_coding	47475799,47442872,47435008,47422442,47420931,47420554,47419328,47418655,47418321,47418134,47417304,47417122,47415098,47414827,47414572,47414180,47413713	47476003,47443091,47435137,47422536,47421029,47420772,47419704,47418843,47418522,47418249,47417823,47417207,47415180,47414993,47414652,47414386,47414099	Gene ID= ENSG00000114650.18 TPM= 27.62 Transcript Type= NA
chr3	47413713	47475955	47413713	47475955	-	ENST00000441517.6@SCAP	ENST00000441517.6	protein_coding	47475799,47442872,47435008,47425997,47425485,47423933,47422442,47420931,47420554,47419328,47418655,47418321,47418134,47417304,47417122,47415098,47414827,47414572,47414180,47413713	47475955,47443091,47435137,47426169,47425611,47424045,47422536,47421029,47420772,47419704,47418843,47418522,47418249,47417823,47417207,47415180,47414993,47414652,47414386,47414099	Gene ID= ENSG00000114650.18 TPM= 32.4 Transcript Type= nonsense_mediated_decay
chr3	47495640	47513386	47495640	47513386	-	transcript1891.chr3.nic@ELP6	transcript1891.chr3.nic	protein_coding	47512992,47511148,47510184,47504330,47501650,47498286,47495640	47513386,47511226,47510254,47504448,47501851,47498432,47496197	Gene ID= ENSG00000163832.15 TPM= 4.6 Transcript Type= NA
chr3	47495640	47513347	47495640	47513347	-	transcript1892.chr3.nic@ELP6	transcript1892.chr3.nic	protein_coding	47513191,47511148,47510184,47504330,47501650,47498286,47495640	47513347,47511226,47510254,47504448,47501851,47498432,47496197	Gene ID= ENSG00000163832.15 TPM= 3.54 Transcript Type= NA
chr3	47495640	47513761	47495640	47513761	-	ENST00000296149.8@ELP6	ENST00000296149.8	protein_coding	47513537,47511148,47510184,47504330,47501650,47498286,47495640	47513761,47511226,47510254,47504448,47501851,47498432,47496197	Gene ID= ENSG00000163832.15 TPM= 22.66 Transcript Type= protein_coding
chr3	47636086	47781931	47636086	47781931	-	transcript1904.chr3.nic@SMARCC1	transcript1904.chr3.nic	protein_coding	47781603,47772817,47745908,47738029,47736034,47729025,47720666,47714415,47710683,47706409,47701278,47693241,47689387,47686049,47680437,47678198,47676629,47675475,47670658,47662334,47661294,47638725,47636086	47781931,47772936,47745993,47738110,47736126,47729094,47720735,47714490,47710808,47706530,47701402,47693300,47689424,47686170,47680508,47678311,47676782,47675588,47670717,47662592,47661455,47638780,47636136	Gene ID= ENSG00000173473.10 TPM= 6.37 Transcript Type= NA
chr3	47802928	47850193	47802928	47850193	+	ENST00000445061.5@DHX30	ENST00000445061.5	protein_coding	47802928,47805326,47810657,47818022,47827347,47829024,47840877,47841617,47843106,47845700,47846165,47847273,47847432,47847781,47848180,47848469,47848624,47848920,47849192,47849451,47849630,47849867	47803212,47805420,47810711,47818117,47827477,47829134,47841178,47841737,47843255,47845852,47847001,47847348,47847536,47847956,47848386,47848550,47848817,47849079,47849349,47849554,47849769,47850193	Gene ID= ENSG00000132153.14 TPM= 32.05 Transcript Type= protein_coding
chr3	47802994	47831128	47802994	47831128	+	transcript1984.chr3.nic@DHX30	transcript1984.chr3.nic	protein_coding	47802994,47805326,47810657,47818022,47819236,47827347,47829024,47830780	47803212,47805420,47810711,47818117,47819264,47827477,47829134,47831128	Gene ID= ENSG00000132153.14 TPM= 3.19 Transcript Type= NA
chr3	47802909	47816972	47802909	47816972	+	ENST00000472718.5@DHX30	ENST00000472718.5	protein_coding	47802909,47805326,47810657,47815963	47803212,47805420,47810711,47816972	Gene ID= ENSG00000132153.14 TPM= 3.19 Transcript Type= retained_intron
chr3	47803134	47850192	47803134	47850192	+	ENST00000395745.6@DHX30	ENST00000395745.6	protein_coding	47803134,47805326,47810657,47818022,47819236,47827347,47829024,47840877,47841617,47843106,47845700,47846165,47847273,47847432,47847781,47848180,47848469,47848624,47848920,47849192,47849451,47849630,47849867	47803212,47805420,47810711,47818117,47819264,47827477,47829134,47841178,47841737,47843255,47845852,47847001,47847348,47847536,47847956,47848386,47848550,47848817,47849079,47849349,47849554,47849769,47850192	Gene ID= ENSG00000132153.14 TPM= 17.71 Transcript Type= nonsense_mediated_decay
chr3	47825028	47850187	47825028	47850187	+	ENST00000457607.1@DHX30	ENST00000457607.1	protein_coding	47825028,47827347,47829024,47840877,47841617,47843106,47845700,47846165,47847273,47847432,47847781,47848180,47848469,47848624,47848920,47849192,47849451,47849630,47849867	47825247,47827477,47829134,47841178,47841737,47843255,47845852,47847001,47847348,47847536,47847956,47848386,47848550,47848817,47849079,47849349,47849554,47849769,47850187	Gene ID= ENSG00000132153.14 TPM= 63.02 Transcript Type= protein_coding
chr3	47850690	48016521	47850690	48016521	-	transcript1925.chr3.nic@MAP4	transcript1925.chr3.nic	protein_coding	48016334,47998638,47977865,47928228,47921765,47918719,47915951,47914817,47877417,47875685,47871917,47871227,47870813,47869214,47867246,47857431,47855248,47853163,47850690	48016521,47998879,47977933,47928350,47921878,47918841,47917174,47914939,47877523,47875900,47872100,47871286,47871105,47869327,47867338,47857512,47855360,47853352,47852938	Gene ID= ENSG00000047849.21 TPM= 743.09 Transcript Type= NA
chr3	47850690	48016438	47850690	48016438	-	transcript1943.chr3.nic@MAP4	transcript1943.chr3.nic	protein_coding	48016334,47998638,47977865,47928228,47921765,47918719,47915951,47914817,47877417,47875685,47871917,47871227,47870813,47857431,47855248,47853163,47850690	48016438,47998879,47977933,47928350,47921878,47918841,47917174,47914939,47877523,47875900,47872100,47871286,47871105,47857512,47855360,47853352,47852938	Gene ID= ENSG00000047849.21 TPM= 685.38 Transcript Type= NA
chr3	47912109	48016521	47912109	48016521	-	transcript1963.chr3.nic@MAP4	transcript1963.chr3.nic	protein_coding	48016334,47998638,47987383,47977865,47928228,47921765,47918719,47915951,47914817,47912109	48016521,47998879,47987433,47977933,47928350,47921878,47918841,47917174,47914939,47912421	Gene ID= ENSG00000047849.21 TPM= 109.05 Transcript Type= NA
chr3	47912109	48088931	47912109	48088931	-	transcript1965.chr3.nic@MAP4	transcript1965.chr3.nic	protein_coding	48088773,47998638,47987383,47977865,47928228,47921765,47918719,47915951,47914817,47912109	48088931,47998879,47987433,47977933,47928350,47921878,47918841,47917174,47914939,47912421	Gene ID= ENSG00000047849.21 TPM= 64.11 Transcript Type= NA
chr3	47912109	48016521	47912109	48016521	-	transcript1974.chr3.nic@MAP4	transcript1974.chr3.nic	protein_coding	48016334,47998638,47977865,47928228,47921765,47918719,47915951,47914817,47912109	48016521,47998879,47977933,47928350,47921878,47918841,47917174,47914939,47912421	Gene ID= ENSG00000047849.21 TPM= 256.45 Transcript Type= NA
chr3	47912109	48088986	47912109	48088986	-	transcript1976.chr3.nic@MAP4	transcript1976.chr3.nic	protein_coding	48088773,47998638,47977865,47928228,47921765,47918719,47915951,47914817,47912109	48088986,47998879,47977933,47928350,47921878,47918841,47917174,47914939,47912421	Gene ID= ENSG00000047849.21 TPM= 155.03 Transcript Type= NA
chr3	47851868	48089272	47851868	48089272	-	ENST00000360240.10@MAP4	ENST00000360240.10	protein_coding	48088773,47998638,47977865,47928228,47921765,47918719,47915951,47914817,47877417,47875685,47871917,47871227,47870813,47869214,47867246,47857431,47855248,47853163,47851868	48089272,47998879,47977933,47928350,47921878,47918841,47917174,47914939,47877523,47875900,47872100,47871286,47871105,47869327,47867338,47857512,47855360,47853352,47853039	Gene ID= ENSG00000047849.21 TPM= 34.83 Transcript Type= protein_coding
chr3	47851094	48088841	47851094	48088841	-	ENST00000426837.6@MAP4	ENST00000426837.6	protein_coding	48088773,47998638,47987383,47977865,47928228,47921765,47918719,47915951,47914817,47909038,47877417,47875685,47871917,47871227,47870813,47869214,47867246,47857431,47855248,47853163,47851094	48088841,47998879,47987433,47977933,47928350,47921878,47918841,47917174,47914939,47912421,47877523,47875900,47872100,47871286,47871105,47869327,47867338,47857512,47855360,47853352,47853039	Gene ID= ENSG00000047849.21 TPM= 150 Transcript Type= protein_coding
chr3	47973084	48016412	47973084	48016412	-	ENST00000434267.5@MAP4	ENST00000434267.5	protein_coding	48016334,47998638,47977865,47973084	48016412,47998879,47977933,47975465	Gene ID= ENSG00000047849.21 TPM= 4.25 Transcript Type= protein_coding
chr3	47889565	47895033	47889565	47895033	+	transcript2023.chr3.nnic@NA	transcript2023.chr3.nnic	NA	47889565	47895033	Gene ID= novel_gene_chr3_2024 TPM= 8.5 Transcript Type= NA
chr3	48223347	48225491	48223347	48225491	+	ENST00000296435.2@CAMP	ENST00000296435.2	protein_coding	48223347,48224354,48224603,48225293	48223712,48224461,48224674,48225491	Gene ID= ENSG00000164047.4 TPM= 1.06 Transcript Type= protein_coding
chr3	48241100	48270987	48241100	48270987	+	ENST00000354698.7@ZNF589	ENST00000354698.7	protein_coding	48241100,48247625,48260813,48267915	48241214,48247677,48260939,48270987	Gene ID= ENSG00000164048.13 TPM= 2.12 Transcript Type= protein_coding
chr3	48293997	48301378	48293997	48301378	-	transcript2058.chr3.nic@NME6	transcript2058.chr3.nic	protein_coding	48301279,48298427,48296727,48296119,48295075,48293997	48301378,48298523,48296829,48296158,48295235,48294803	Gene ID= ENSG00000172113.8 TPM= 2.12 Transcript Type= NA
chr3	48293997	48298524	48293997	48298524	-	ENST00000426689.6@NME6	ENST00000426689.6	protein_coding	48298427,48296727,48296119,48295075,48293997	48298524,48296829,48296158,48295235,48294803	Gene ID= ENSG00000172113.8 TPM= 2.12 Transcript Type= protein_coding
chr3	48403856	48429463	48403856	48429463	-	ENST00000358536.8@PLXNB1	ENST00000358536.8	protein_coding	48429253,48425281,48423505,48422765,48422331,48422105,48421674,48421228,48420848,48420665,48419577,48419244,48418917,48418449,48418191,48417911,48416346,48416031,48415583,48415176,48414799,48413895,48413670,48413069,48412742,48412442,48412238,48411863,48410868,48410455,48410296,48409905,48409571,48409329,48407027,48406823,48405724,48403856	48429463,48425333,48424617,48422947,48422459,48422205,48421806,48421384,48420956,48420773,48420257,48419366,48419039,48418542,48418363,48418062,48416451,48416167,48415759,48415347,48415041,48414071,48413818,48413169,48412959,48412620,48412304,48412009,48411036,48410558,48410380,48410077,48409731,48409476,48407091,48406898,48405798,48404590	Gene ID= ENSG00000164050.12 TPM= 44.61 Transcript Type= protein_coding
chr3	48432164	48440081	48432164	48440081	-	ENST00000447018.5@CCDC51	ENST00000447018.5	protein_coding	48439988,48434817,48433707,48432164	48440081,48435015,48433871,48433166	Gene ID= ENSG00000164051.13 TPM= 2.47 Transcript Type= protein_coding
chr3	48432170	48440142	48432170	48440142	-	transcript2086.chr3.nic@CCDC51	transcript2086.chr3.nic	protein_coding	48440096,48434817,48433707,48432170	48440142,48435136,48433871,48433166	Gene ID= ENSG00000164051.13 TPM= 12.03 Transcript Type= NA
chr3	48432170	48440065	48432170	48440065	-	ENST00000395694.6@CCDC51	ENST00000395694.6	protein_coding	48439988,48434817,48433707,48432170	48440065,48435136,48433871,48433166	Gene ID= ENSG00000164051.13 TPM= 5.66 Transcript Type= protein_coding
chr3	48440257	48444208	48440257	48444208	+	ENST00000438607.2@TMA7	ENST00000438607.2	protein_coding	48440257,48440403,48440541,48443848	48440312,48440458,48440628,48444208	Gene ID= ENSG00000232112.3 TPM= 97.72 Transcript Type= protein_coding
chr3	48446733	48465655	48446733	48465655	+	ENST00000320211.8@ATRIP	ENST00000320211.8	protein_coding	48446733,48450037,48451729,48454300,48457259,48459359,48459787,48460110,48463745,48464041,48464582,48464831,48465487	48447092,48450170,48451899,48454418,48457416,48459454,48459916,48460799,48463881,48464132,48464662,48465083,48465655	Gene ID= ENSG00000164053.19 TPM= 3.19 Transcript Type= protein_coding
chr3	48446733	48465655	48446733	48465655	+	ENST00000346691.9@ATRIP	ENST00000346691.9	protein_coding	48446733,48450037,48451729,48454300,48457259,48459359,48459787,48460110,48463745,48464041,48464831,48465487	48447092,48450170,48451899,48454418,48457416,48459454,48459916,48460799,48463881,48464132,48465083,48465655	Gene ID= ENSG00000164053.19 TPM= 2.12 Transcript Type= protein_coding
chr3	48465848	48467645	48465848	48467645	+	transcript2092.chr3.nic@AC134772.2	transcript2092.chr3.nic	protein_coding	48465848,48466630	48466309,48467645	Gene ID= ENSG00000282827.2 TPM= 4.78 Transcript Type= NA
chr3	48465811	48467645	48465811	48467645	+	ENST00000433541.1@TREX1	ENST00000433541.1	protein_coding	48465811,48466251,48466630,48466740	48465938,48466309,48466641,48467645	Gene ID= ENSG00000213689.11 TPM= 2.66 Transcript Type= protein_coding
chr3	48467798	48504431	48467798	48504431	-	ENST00000296444.6@SHISA5	ENST00000296444.6	protein_coding	48504019,48501137,48479177,48469728,48469361,48467798	48504431,48501293,48479257,48469843,48469573,48469186	Gene ID= ENSG00000164054.15 TPM= 39.51 Transcript Type= protein_coding
chr3	48467876	48473208	48467876	48473208	-	ENST00000426002.5@SHISA5	ENST00000426002.5	protein_coding	48473010,48469728,48469361,48467876	48473208,48469843,48469573,48469186	Gene ID= ENSG00000164054.15 TPM= 71.38 Transcript Type= protein_coding
chr3	48467877	48504795	48467877	48504795	-	ENST00000442747.5@SHISA5	ENST00000442747.5	protein_coding	48504423,48501137,48479177,48469728,48469361,48467877	48504795,48501293,48479257,48469843,48469573,48469186	Gene ID= ENSG00000164054.15 TPM= 3.4 Transcript Type= protein_coding
chr3	48467911	48504129	48467911	48504129	-	ENST00000443308.6@SHISA5	ENST00000443308.6	protein_coding	48504019,48501158,48479177,48469728,48469361,48467911	48504129,48501293,48479257,48469843,48469573,48469186	Gene ID= ENSG00000164054.15 TPM= 31.02 Transcript Type= protein_coding
chr3	48467876	48473103	48467876	48473103	-	ENST00000494854.5@SHISA5	ENST00000494854.5	protein_coding	48473010,48469728,48467876	48473103,48469843,48469573	Gene ID= ENSG00000164054.15 TPM= 1.27 Transcript Type= retained_intron
chr3	48599003	48610037	48599003	48610037	-	ENST00000203407.5@UQCRC1	ENST00000203407.5	protein_coding	48609552,48609162,48605770,48604651,48604233,48603564,48601352,48600975,48600680,48600482,48600063,48599635,48599003	48610037,48609302,48605856,48604780,48604431,48603643,48601467,48601118,48600840,48600567,48600151,48599710,48599192	Gene ID= ENSG00000010256.10 TPM= 2691.6 Transcript Type= protein_coding
chr3	48625723	48635483	48625723	48635483	-	ENST00000420764.6@SLC26A6	ENST00000420764.6	protein_coding	48635371,48633477,48633251,48632974,48632245,48631880,48631649,48631224,48630993,48630607,48630438,48630062,48629872,48629642,48628622,48628434,48627946,48626876,48626631,48626218,48625723	48635483,48633635,48633390,48633084,48632396,48632044,48631801,48631306,48631140,48630720,48630515,48630157,48629978,48629711,48628714,48628541,48628038,48627052,48626685,48626354,48626000	Gene ID= ENSG00000225697.12 TPM= 3.19 Transcript Type= protein_coding
chr3	48673844	48685884	48673844	48685884	-	ENST00000416649.6@NCKIPSD	ENST00000416649.6	protein_coding	48685637,48682903,48682348,48682045,48681287,48680059,48679801,48679575,48679377,48679055,48678877,48678564,48673844	48685884,48683012,48682552,48682135,48681780,48680229,48679887,48679713,48679457,48679183,48678969,48678736,48674747	Gene ID= ENSG00000213672.7 TPM= 20 Transcript Type= protein_coding
chr3	48673844	48685927	48673844	48685927	-	ENST00000294129.6@NCKIPSD	ENST00000294129.6	protein_coding	48685637,48682903,48682348,48682045,48681287,48680059,48679801,48679575,48679377,48679055,48678877,48678564,48673844	48685927,48683012,48682552,48682156,48681780,48680229,48679887,48679713,48679457,48679183,48678969,48678736,48674747	Gene ID= ENSG00000213672.7 TPM= 12.57 Transcript Type= protein_coding
chr3	48673845	48676862	48673845	48676862	-	transcript2178.chr3.nnic@NA	transcript2178.chr3.nnic	NA	48673845	48676862	Gene ID= novel_gene_chr3_2179 TPM= 3.54 Transcript Type= NA
chr3	48688003	48717220	48688003	48717220	-	transcript2181.chr3.nnic@IP6K2	transcript2181.chr3.nnic	protein_coding	48717157,48695090,48692954,48691307,48689538,48688003	48717220,48695421,48693179,48691482,48689647,48688773	Gene ID= ENSG00000068745.14 TPM= 2.66 Transcript Type= NA
chr3	48688003	48717250	48688003	48717250	-	ENST00000328631.9@IP6K2	ENST00000328631.9	protein_coding	48717157,48695090,48692954,48691307,48689538,48688003	48717250,48695421,48693179,48691482,48689713,48688773	Gene ID= ENSG00000068745.14 TPM= 18.06 Transcript Type= protein_coding
chr3	48688003	48695554	48688003	48695554	-	transcript2184.chr3.nic@IP6K2	transcript2184.chr3.nic	protein_coding	48695090,48692954,48691307,48689538,48688003	48695554,48693179,48691482,48689713,48688773	Gene ID= ENSG00000068745.14 TPM= 5.31 Transcript Type= NA
chr3	48688003	48694276	48688003	48694276	-	transcript2185.chr3.nic@IP6K2	transcript2185.chr3.nic	protein_coding	48692954,48691307,48689538,48688003	48694276,48691482,48689713,48688773	Gene ID= ENSG00000068745.14 TPM= 2.66 Transcript Type= NA
chr3	48693448	48717216	48693448	48717216	-	ENST00000340879.8@IP6K2	ENST00000340879.8	protein_coding	48717157,48695090,48693448	48717216,48695421,48694240	Gene ID= ENSG00000068745.14 TPM= 5.31 Transcript Type= protein_coding
chr3	48693488	48717203	48693488	48717203	-	ENST00000416707.1@IP6K2	ENST00000416707.1	protein_coding	48717157,48695090,48694694,48693488	48717203,48695418,48694824,48694240	Gene ID= ENSG00000068745.14 TPM= 1.06 Transcript Type= nonsense_mediated_decay
chr3	48693785	48717192	48693785	48717192	-	ENST00000449610.5@IP6K2	ENST00000449610.5	protein_coding	48717157,48693785	48717192,48695421	Gene ID= ENSG00000068745.14 TPM= 1.06 Transcript Type= protein_coding
chr3	48746579	48847846	48746579	48847846	-	ENST00000265563.12@PRKAR2A	ENST00000265563.12	protein_coding	48847335,48807649,48793997,48790544,48782986,48772955,48765248,48765004,48756379,48752176,48746579	48847846,48807684,48794049,48790627,48783092,48773108,48765349,48765078,48756444,48752317,48751718	Gene ID= ENSG00000114302.15 TPM= 6.37 Transcript Type= protein_coding
chr3	48856927	48898886	48856927	48898886	-	transcript2208.chr3.nnic@SLC25A20	transcript2208.chr3.nnic	protein_coding	48898690,48891980,48883997,48879358,48862542,48859555,48859092,48858507,48857649,48856927	48898886,48892072,48884124,48879448,48862659,48859627,48859201,48858631,48857772,48857489	Gene ID= ENSG00000178537.9 TPM= 4.6 Transcript Type= NA
chr3	48856928	48898906	48856928	48898906	-	transcript2213.chr3.nnic@SLC25A20	transcript2213.chr3.nnic	protein_coding	48898690,48891980,48883997,48879358,48862542,48856928	48898906,48892072,48884124,48879448,48862659,48857772	Gene ID= ENSG00000178537.9 TPM= 6.19 Transcript Type= NA
chr3	48856936	48898993	48856936	48898993	-	ENST00000319017.4@SLC25A20	ENST00000319017.4	protein_coding	48898690,48891980,48883997,48879358,48862542,48859555,48859092,48858507,48856936	48898993,48892072,48884124,48879448,48862659,48859627,48859201,48858631,48857772	Gene ID= ENSG00000178537.9 TPM= 114.53 Transcript Type= protein_coding
chr3	48918818	48983620	48918818	48983620	+	transcript2216.chr3.nic@ARIH2	transcript2216.chr3.nic	protein_coding	48918818,48922748,48924718,48927462,48945136,48961612,48964919,48967125,48968534,48970595,48973699,48974817,48974958,48979482,48980353,48981660,48982896,48983199	48918998,48922811,48924839,48927813,48945181,48961679,48964982,48967275,48968655,48970704,48973816,48974867,48974979,48979633,48980496,48981728,48982979,48983620	Gene ID= ENSG00000177479.19 TPM= 5.31 Transcript Type= NA
chr3	48918821	48986382	48918821	48986382	+	ENST00000356401.8@ARIH2	ENST00000356401.8	protein_coding	48918821,48922748,48927462,48961612,48964919,48967125,48968534,48970595,48973699,48974817,48974958,48979482,48980353,48981660,48982896,48983199	48918998,48922811,48927813,48961679,48964982,48967275,48968655,48970704,48973816,48974867,48974979,48979633,48980496,48981728,48982979,48986382	Gene ID= ENSG00000177479.19 TPM= 18.06 Transcript Type= protein_coding
chr3	48918842	48983620	48918842	48983620	+	transcript2246.chr3.nic@ARIH2	transcript2246.chr3.nic	protein_coding	48918842,48924718,48927462,48961612,48964919,48967125,48968534,48970595,48973699,48974817,48974958,48979482,48980353,48981660,48982896,48983199	48918998,48924839,48927813,48961679,48964982,48967275,48968655,48970704,48973816,48974867,48974979,48979633,48980496,48981728,48982979,48983620	Gene ID= ENSG00000177479.19 TPM= 13.81 Transcript Type= NA
chr3	48918818	48928666	48918818	48928666	+	transcript2317.chr3.nic@ARIH2	transcript2317.chr3.nic	protein_coding	48918818,48922748,48924718,48927462	48918998,48922811,48924839,48928666	Gene ID= ENSG00000177479.19 TPM= 5.31 Transcript Type= NA
chr3	48918836	48983620	48918836	48983620	+	ENST00000449376.5@ARIH2	ENST00000449376.5	protein_coding	48918836,48922748,48924718,48927462,48961612,48964919,48967125,48968534,48970595,48973699,48974817,48974958,48979482,48980353,48981660,48982896,48983199	48918998,48922811,48924839,48927813,48961679,48964982,48967275,48968655,48970704,48973816,48974867,48974979,48979633,48980496,48981728,48982979,48983620	Gene ID= ENSG00000177479.19 TPM= 95.59 Transcript Type= protein_coding
chr3	48990250	49007115	48990250	49007115	+	transcript2292.chr3.nic@P4HTM	transcript2292.chr3.nic	protein_coding	48990250,48990833,49001438,49002500,49004098,49004861,49006687	48990610,48990914,49001628,49002596,49004260,49006187,49007115	Gene ID= ENSG00000178467.17 TPM= 5.31 Transcript Type= NA
chr3	48990122	49004595	48990122	49004595	+	transcript2303.chr3.nic@P4HTM	transcript2303.chr3.nic	protein_coding	48990122,48990833,49001438,49002500,49004098	48990610,48990914,49001628,49002596,49004595	Gene ID= ENSG00000178467.17 TPM= 4.25 Transcript Type= NA
chr3	48989864	49007115	48989864	49007115	+	transcript2304.chr3.nic@P4HTM	transcript2304.chr3.nic	protein_coding	48989864,48990833,49001438,49002500,49006687	48990610,48990914,49001628,49002596,49007115	Gene ID= ENSG00000178467.17 TPM= 9.03 Transcript Type= NA
chr3	48989908	49007115	48989908	49007115	+	ENST00000472301.5@P4HTM	ENST00000472301.5	protein_coding	48989908,48990833,49001438,49002500,49004098,49004861,49006064,49006687	48990610,48990914,49001628,49002596,49004260,49005867,49006187,49007115	Gene ID= ENSG00000178467.17 TPM= 8.68 Transcript Type= retained_intron
chr3	48989886	49007154	48989886	49007154	+	ENST00000383729.8@P4HTM	ENST00000383729.8	protein_coding	48989886,48990833,49001438,49002500,49004098,49004861,49005777,49006064,49006687	48990610,48990914,49001628,49002596,49004260,49005046,49005867,49006187,49007154	Gene ID= ENSG00000178467.17 TPM= 135.07 Transcript Type= protein_coding
chr3	49015488	49018571	49015488	49018571	-	ENST00000341949.8@DALRD3	ENST00000341949.8	protein_coding	49018400,49018023,49017613,49017434,49017228,49016774,49016612,49016429,49016158,49015973,49015804,49015488	49018571,49018318,49017869,49017513,49017356,49016847,49016673,49016511,49016340,49016086,49015872,49015707	Gene ID= ENSG00000178149.16 TPM= 10.62 Transcript Type= protein_coding
chr3	49015488	49018564	49015488	49018564	-	ENST00000441576.6@DALRD3	ENST00000441576.6	protein_coding	49018400,49018023,49017613,49017434,49017228,49016774,49016612,49016429,49016158,49015973,49015804,49015488	49018564,49018318,49017869,49017513,49017356,49016847,49016673,49016511,49016340,49016060,49015872,49015707	Gene ID= ENSG00000178149.16 TPM= 2.12 Transcript Type= protein_coding
chr3	49021011	49023495	49021011	49023495	+	ENST00000326925.10@NDUFAF3	ENST00000326925.10	protein_coding	49021011,49022346,49022702,49022876,49023056	49022221,49022538,49022768,49022976,49023495	Gene ID= ENSG00000178057.14 TPM= 24.43 Transcript Type= protein_coding
chr3	49021605	49023288	49021605	49023288	+	ENST00000451378.2@NDUFAF3	ENST00000451378.2	protein_coding	49021605,49022346,49022702,49022876,49023056	49021784,49022538,49022768,49022976,49023288	Gene ID= ENSG00000178057.14 TPM= 4.78 Transcript Type= protein_coding
chr3	49022113	49023287	49022113	49023287	+	ENST00000496152.1@NDUFAF3	ENST00000496152.1	protein_coding	49022113,49022702,49022876,49023056	49022538,49022768,49022976,49023287	Gene ID= ENSG00000178057.14 TPM= 3.72 Transcript Type= retained_intron
chr3	49023664	49027150	49023664	49027150	-	transcript2343.chr3.nnic@NA	transcript2343.chr3.nnic	NA	49023664	49027150	Gene ID= novel_gene_chr3_2344 TPM= 21.24 Transcript Type= NA
chr3	49024325	49029444	49024325	49029444	-	transcript2254.chr3.nic@IMPDH2	transcript2254.chr3.nic	protein_coding	49029253,49028758,49028431,49028248,49027710,49026960,49026687,49026519,49026324,49025995,49025126,49024896,49024659,49024495,49024325	49029444,49028806,49028532,49028322,49027916,49027047,49026886,49026609,49026419,49026066,49025269,49025040,49024802,49024578,49024404	Gene ID= ENSG00000178035.11 TPM= 10.2 Transcript Type= NA
chr3	49024325	49029444	49024325	49029444	-	transcript2260.chr3.nic@IMPDH2	transcript2260.chr3.nic	protein_coding	49029253,49028758,49028431,49027710,49026960,49026687,49026519,49026324,49025995,49025126,49024896,49024659,49024495,49024325	49029444,49028806,49028532,49027916,49027047,49026886,49026609,49026419,49026066,49025269,49025040,49024802,49024578,49024404	Gene ID= ENSG00000178035.11 TPM= 4.89 Transcript Type= NA
chr3	49024325	49029444	49024325	49029444	-	transcript2262.chr3.nic@IMPDH2	transcript2262.chr3.nic	protein_coding	49029253,49028758,49028431,49027710,49026960,49026687,49026519,49026324,49025126,49024896,49024659,49024495,49024325	49029444,49028806,49028532,49027916,49027047,49026886,49026609,49026419,49025269,49025040,49024802,49024578,49024404	Gene ID= ENSG00000178035.11 TPM= 2.76 Transcript Type= NA
chr3	49024325	49029390	49024325	49029390	-	ENST00000326739.8@IMPDH2	ENST00000326739.8	protein_coding	49029253,49028758,49028431,49028248,49027710,49026960,49026687,49026519,49026324,49025126,49024896,49024659,49024495,49024325	49029390,49028806,49028532,49028322,49027916,49027047,49026886,49026609,49026419,49025269,49025040,49024802,49024578,49024404	Gene ID= ENSG00000178035.11 TPM= 46.31 Transcript Type= protein_coding
chr3	49024325	49028473	49024325	49028473	-	ENST00000429182.5@IMPDH2	ENST00000429182.5	protein_coding	49028431,49028248,49027710,49026960,49026687,49026519,49026324,49025995,49025126,49024896,49024659,49024495,49024325	49028473,49028322,49027916,49027047,49026886,49026609,49026419,49026066,49025269,49025040,49024802,49024578,49024404	Gene ID= ENSG00000178035.11 TPM= 8.07 Transcript Type= protein_coding
chr3	49024828	49025175	49024828	49025175	+	transcript2339.chr3.nnic@NA	transcript2339.chr3.nnic	NA	49024828	49025175	Gene ID= novel_gene_chr3_2340 TPM= 2.12 Transcript Type= NA
chr3	49027202	49029702	49027202	49029702	+	transcript2341.chr3.nnic@NA	transcript2341.chr3.nnic	NA	49027202	49029702	Gene ID= novel_gene_chr3_2342 TPM= 2.12 Transcript Type= NA
chr3	49029932	49094062	49029932	49094062	-	ENST00000357496.6@QRICH1	ENST00000357496.6	protein_coding	49093912,49092397,49076709,49056862,49047069,49046425,49044390,49033120,49032622,49032183,49029932	49094062,49092456,49077038,49057890,49047246,49046579,49044504,49033228,49032773,49032273,49030644	Gene ID= ENSG00000198218.10 TPM= 2.66 Transcript Type= protein_coding
chr3	49029707	49094363	49029707	49094363	-	ENST00000395443.6@QRICH1	ENST00000395443.6	protein_coding	49093912,49076709,49056862,49047069,49046425,49044390,49033120,49032622,49032183,49029707	49094363,49077038,49057890,49047246,49046579,49044504,49033228,49032773,49032273,49030644	Gene ID= ENSG00000198218.10 TPM= 17.53 Transcript Type= protein_coding
chr3	49095932	49105135	49095932	49105135	-	ENST00000306125.11@QARS	ENST00000306125.11	protein_coding	49104617,49104324,49103863,49103631,49103345,49102419,49102205,49101828,49101620,49101355,49100575,49100380,49100190,49099961,49099761,49099510,49099344,49099110,49098885,49098600,49098353,49098192,49097992,49095932	49105135,49104471,49103972,49103706,49103409,49102472,49102265,49101899,49101705,49101441,49100674,49100458,49100298,49100091,49099853,49099647,49099431,49099253,49098989,49098692,49098480,49098258,49098117,49096079	Gene ID= ENSG00000172053.17 TPM= 91.08 Transcript Type= protein_coding
chr3	49095939	49104532	49095939	49104532	-	ENST00000464962.6@QARS	ENST00000464962.6	protein_coding	49104324,49103863,49103631,49103345,49102419,49102205,49101828,49101620,49101355,49100575,49100380,49100190,49099961,49099761,49099510,49099344,49099110,49098885,49098600,49098353,49098192,49097992,49095939	49104532,49103972,49103706,49103409,49102472,49102265,49101899,49101705,49101441,49100674,49100458,49100298,49100091,49099853,49099647,49099431,49099253,49098989,49098692,49098480,49098258,49098117,49096079	Gene ID= ENSG00000172053.17 TPM= 10.54 Transcript Type= protein_coding
chr3	49095937	49104538	49095937	49104538	-	transcript2352.chr3.nic@QARS	transcript2352.chr3.nic	protein_coding	49104373,49103863,49103631,49103345,49102419,49102205,49101828,49101620,49101355,49100575,49100380,49100190,49099961,49099761,49099510,49099344,49099110,49098885,49098600,49098353,49098192,49097992,49095937	49104538,49103972,49103706,49103409,49102472,49102265,49101899,49101705,49101441,49100674,49100458,49100298,49100091,49099853,49099647,49099431,49099253,49098989,49098692,49098480,49098258,49098117,49096079	Gene ID= ENSG00000172053.17 TPM= 10.71 Transcript Type= NA
chr3	49095937	49104802	49095937	49104802	-	transcript2354.chr3.nic@QARS	transcript2354.chr3.nic	protein_coding	49104617,49104324,49103863,49103345,49102419,49102205,49101828,49101620,49101355,49100575,49100380,49100190,49099961,49099761,49099510,49099344,49099110,49098885,49098600,49098353,49098192,49097992,49095937	49104802,49104471,49103972,49103706,49102472,49102265,49101899,49101705,49101441,49100674,49100458,49100298,49100091,49099853,49099647,49099431,49099253,49098989,49098692,49098480,49098258,49098117,49096079	Gene ID= ENSG00000172053.17 TPM= 11.95 Transcript Type= NA
chr3	49108050	49120946	49108050	49120946	-	transcript2367.chr3.nic@USP19	transcript2367.chr3.nic	protein_coding	49120756,49119022,49117947,49117657,49117437,49117059,49116727,49116451,49116280,49116047,49115724,49115444,49115228,49114959,49114763,49114174,49113992,49112489,49112284,49111911,49111500,49111255,49110950,49110711,49110444,49110184,49108050	49120946,49119281,49118120,49117785,49117570,49117361,49116943,49116607,49116351,49116162,49115944,49115639,49115361,49115117,49114873,49114284,49114093,49112629,49112402,49112048,49111813,49111365,49111166,49110863,49110604,49110362,49108528	Gene ID= ENSG00000172046.18 TPM= 15.4 Transcript Type= NA
chr3	49108050	49120808	49108050	49120808	-	ENST00000417901.5@USP19	ENST00000417901.5	protein_coding	49120756,49119022,49117947,49117657,49117437,49117059,49116727,49116451,49116280,49116047,49115724,49115444,49115228,49114959,49114763,49114174,49113992,49112489,49112284,49111911,49111500,49111255,49110950,49110711,49110444,49110184,49108050	49120808,49119281,49118120,49117830,49117570,49117361,49116943,49116607,49116351,49116162,49115944,49115639,49115361,49115117,49114873,49114284,49114093,49112629,49112402,49112048,49111813,49111365,49111166,49110863,49110604,49110362,49108528	Gene ID= ENSG00000172046.18 TPM= 21.77 Transcript Type= protein_coding
chr3	49121114	49133118	49121114	49133118	-	ENST00000418109.5@LAMB2	ENST00000418109.5	protein_coding	49132955,49132792,49132491,49132270,49132116,49131535,49131379,49130950,49130740,49130231,49129839,49129604,49129245,49129020,49128661,49128458,49126365,49125967,49125747,49125253,49125006,49124701,49124395,49124190,49123728,49123447,49123132,49122704,49122163,49121944,49121684,49121433,49121114	49133118,49132868,49132663,49132405,49132189,49131723,49131442,49131152,49130860,49130419,49130018,49129716,49129324,49129152,49128819,49128585,49126497,49126159,49125890,49125484,49125169,49124925,49124612,49124286,49124100,49123631,49123373,49123052,49122370,49122085,49121860,49121592,49121362	Gene ID= ENSG00000172037.13 TPM= 313.63 Transcript Type= protein_coding
chr3	49121133	49133020	49121133	49133020	-	ENST00000305544.8@LAMB2	ENST00000305544.8	protein_coding	49132792,49132491,49132270,49132116,49131535,49131379,49130950,49130740,49130231,49129839,49129604,49129245,49129020,49128661,49128458,49126365,49125967,49125747,49125253,49125006,49124701,49124395,49124190,49123728,49123447,49123132,49122704,49122163,49121944,49121684,49121433,49121133	49133020,49132663,49132405,49132189,49131723,49131442,49131152,49130860,49130419,49130018,49129716,49129324,49129152,49128819,49128585,49126497,49126159,49125890,49125484,49125169,49124925,49124612,49124286,49124100,49123631,49123373,49123052,49122370,49122085,49121860,49121592,49121362	Gene ID= ENSG00000172037.13 TPM= 167.06 Transcript Type= protein_coding
chr3	49121114	49121976	49121114	49121976	-	ENST00000467506.5@LAMB2	ENST00000467506.5	protein_coding	49121944,49121684,49121114	49121976,49121860,49121592	Gene ID= ENSG00000172037.13 TPM= 8.5 Transcript Type= retained_intron
chr3	49165667	49166317	49165667	49166317	-	transcript2393.chr3.nnic@NA	transcript2393.chr3.nnic	NA	49165667	49166317	Gene ID= novel_gene_chr3_2394 TPM= 2.12 Transcript Type= NA
chr3	49171574	49176486	49171574	49176486	+	transcript2396.chr3.nic@KLHDC8B	transcript2396.chr3.nic	protein_coding	49171574,49172636,49174239,49174742,49175062,49175605	49171685,49172801,49174403,49174966,49175163,49176486	Gene ID= ENSG00000185909.14 TPM= 25.49 Transcript Type= NA
chr3	49171617	49176486	49171617	49176486	+	transcript2397.chr3.nnic@KLHDC8B	transcript2397.chr3.nnic	protein_coding	49171617,49172636,49174239,49174721,49175062,49175605	49171685,49173145,49174403,49174966,49175163,49176486	Gene ID= ENSG00000185909.14 TPM= 4.25 Transcript Type= NA
chr3	49171591	49176486	49171591	49176486	+	transcript2407.chr3.nic@KLHDC8B	transcript2407.chr3.nic	protein_coding	49171591,49172636,49174239,49174742	49171685,49173145,49174403,49176486	Gene ID= ENSG00000185909.14 TPM= 4.25 Transcript Type= NA
chr3	49171611	49176486	49171611	49176486	+	ENST00000332780.3@KLHDC8B	ENST00000332780.3	protein_coding	49171611,49172636,49174239,49174742,49175062,49175605	49171685,49173145,49174403,49174966,49175163,49176486	Gene ID= ENSG00000185909.14 TPM= 189.06 Transcript Type= protein_coding
chr3	49278170	49340098	49278170	49340098	-	transcript2435.chr3.nic@USP4	transcript2435.chr3.nic	protein_coding	49339924,49335469,49327686,49325719,49324894,49324702,49311514,49310620,49305715,49302384,49300467,49298552,49297870,49294407,49292510,49286098,49284849,49284466,49283987,49280744,49278170	49340098,49335596,49327816,49325845,49325039,49324763,49311654,49310737,49305888,49302542,49300691,49298635,49297964,49294598,49292598,49286325,49284919,49284584,49284136,49280847,49278451	Gene ID= ENSG00000114316.12 TPM= 11.68 Transcript Type= NA
chr3	49278170	49340098	49278170	49340098	-	transcript2438.chr3.nic@USP4	transcript2438.chr3.nic	protein_coding	49339924,49335469,49327686,49325719,49324894,49324702,49310620,49305715,49302384,49300467,49298552,49297870,49294407,49292510,49286098,49284849,49284466,49283987,49280744,49278170	49340098,49335596,49327816,49325845,49325039,49324763,49310737,49305888,49302542,49300691,49298635,49297964,49294598,49292598,49286325,49284919,49284584,49284136,49280847,49278451	Gene ID= ENSG00000114316.12 TPM= 5.31 Transcript Type= NA
chr3	49323993	49340098	49323993	49340098	-	transcript2451.chr3.nic@USP4	transcript2451.chr3.nic	protein_coding	49339924,49335469,49327686,49325719,49324894,49323993	49340098,49335596,49327816,49325845,49325039,49324763	Gene ID= ENSG00000114316.12 TPM= 5.31 Transcript Type= NA
chr3	49277831	49340033	49277831	49340033	-	ENST00000351842.8@USP4	ENST00000351842.8	protein_coding	49339924,49335469,49327686,49325719,49324894,49324702,49310620,49305715,49302384,49300467,49298552,49297870,49294407,49292510,49286098,49284849,49284466,49283987,49280744,49278814,49277831	49340033,49335596,49327816,49325845,49325039,49324763,49310737,49305888,49302542,49300691,49298635,49297964,49294598,49292598,49286325,49284919,49284584,49284136,49280847,49278902,49278451	Gene ID= ENSG00000114316.12 TPM= 3.19 Transcript Type= protein_coding
chr3	49278106	49340071	49278106	49340071	-	ENST00000265560.8@USP4	ENST00000265560.8	protein_coding	49339924,49335469,49327686,49325719,49324894,49324702,49311514,49310620,49305715,49302384,49300467,49298552,49297870,49294407,49292510,49286098,49284849,49284466,49283987,49280744,49278814,49278106	49340071,49335596,49327816,49325845,49325039,49324763,49311654,49310737,49305888,49302542,49300691,49298635,49297964,49294598,49292598,49286325,49284919,49284584,49284136,49280847,49278902,49278451	Gene ID= ENSG00000114316.12 TPM= 40.36 Transcript Type= protein_coding
chr3	49311785	49340036	49311785	49340036	-	ENST00000416417.5@USP4	ENST00000416417.5	protein_coding	49339924,49335469,49327686,49325719,49324894,49324702,49311785	49340036,49335596,49327816,49325845,49325039,49324763,49312613	Gene ID= ENSG00000114316.12 TPM= 2.12 Transcript Type= protein_coding
chr3	49319444	49322608	49319444	49322608	+	transcript2456.chr3.nnic@NA	transcript2456.chr3.nnic	NA	49319444	49322608	Gene ID= novel_gene_chr3_2457 TPM= 5.31 Transcript Type= NA
chr3	49359145	49412202	49359145	49412202	-	ENST00000418115.5@RHOA	ENST00000418115.5	protein_coding	49411820,49375434,49368428,49362496,49359145	49412202,49375591,49368548,49362626,49360382	Gene ID= ENSG00000067560.10 TPM= 281.47 Transcript Type= protein_coding
chr3	49412206	49416475	49412206	49416475	+	ENST00000273590.3@TCTA	ENST00000273590.3	protein_coding	49412206,49413056,49414820	49412640,49413110,49416475	Gene ID= ENSG00000145022.4 TPM= 42.49 Transcript Type= protein_coding
chr3	49416778	49422554	49416778	49422554	-	ENST00000395338.7@AMT	ENST00000395338.7	protein_coding	49422361,49422104,49421492,49420211,49419710,49419260,49418971,49417818,49417615,49416778	49422554,49422271,49421572,49420342,49419788,49419405,49419151,49417973,49417718,49417367	Gene ID= ENSG00000145020.15 TPM= 4.78 Transcript Type= protein_coding
chr3	49416779	49422529	49416779	49422529	-	ENST00000538581.6@AMT	ENST00000538581.6	protein_coding	49422361,49422104,49421492,49420211,49419710,49419260,49418971,49417818,49416779	49422529,49422257,49421572,49420342,49419788,49419405,49419151,49417973,49417718	Gene ID= ENSG00000145020.15 TPM= 3.9 Transcript Type= protein_coding
chr3	49416775	49422753	49416775	49422753	-	ENST00000273588.8@AMT	ENST00000273588.8	protein_coding	49422361,49422104,49421492,49420211,49419710,49419260,49418971,49417818,49416775	49422753,49422271,49421572,49420342,49419788,49419405,49419151,49417973,49417718	Gene ID= ENSG00000145020.15 TPM= 79.31 Transcript Type= protein_coding
chr3	49418693	49422472	49418693	49422472	-	ENST00000491800.3@AMT	ENST00000491800.3	protein_coding	49418693	49422472	Gene ID= ENSG00000145020.15 TPM= 1.06 Transcript Type= retained_intron
chr3	49416780	49422457	49416780	49422457	-	ENST00000637682.1@AMT	ENST00000637682.1	protein_coding	49422361,49422104,49421492,49420211,49419710,49419260,49418971,49416780	49422457,49422271,49421572,49420342,49419788,49419405,49419151,49417718	Gene ID= ENSG00000145020.15 TPM= 2.3 Transcript Type= protein_coding
chr3	49416794	49422463	49416794	49422463	-	ENST00000476226.6@AMT	ENST00000476226.6	protein_coding	49422361,49422104,49421492,49419710,49419260,49418971,49417818,49416794	49422463,49422257,49421572,49420342,49419405,49419151,49417973,49417718	Gene ID= ENSG00000145020.15 TPM= 1.06 Transcript Type= retained_intron
chr3	49416824	49422460	49416824	49422460	-	ENST00000637994.1@AMT	ENST00000637994.1	protein_coding	49422361,49422104,49421492,49419710,49418971,49417818,49416824	49422460,49422271,49421572,49420342,49419405,49417973,49417718	Gene ID= ENSG00000145020.15 TPM= 1.06 Transcript Type= retained_intron
chr3	49422946	49429314	49422946	49429314	-	transcript2479.chr3.nnic@AC104452.1	transcript2479.chr3.nnic	protein_coding	49429108,49426252,49425883,49425367,49424949,49424335,49422946	49429314,49426428,49425996,49425438,49425053,49424874,49423510	Gene ID= ENSG00000283189.2 TPM= 2.12 Transcript Type= NA
chr3	49422946	49429314	49422946	49429314	-	transcript2490.chr3.nnic@AC104452.1	transcript2490.chr3.nnic	protein_coding	49429108,49426339,49422946	49429314,49426428,49423538	Gene ID= ENSG00000283189.2 TPM= 4.25 Transcript Type= NA
chr3	49422946	49429326	49422946	49429326	-	ENST00000273598.7@NICN1	ENST00000273598.7	protein_coding	49429108,49426252,49425883,49425367,49424949,49422946	49429326,49426428,49425996,49425438,49425053,49424874	Gene ID= ENSG00000145029.13 TPM= 2.12 Transcript Type= protein_coding
chr3	49422947	49429288	49422947	49429288	-	ENST00000615713.4@NICN1	ENST00000615713.4	protein_coding	49429108,49426252,49425883,49425367,49424949,49424162,49422947	49429288,49426428,49425996,49425438,49425053,49424874,49423505	Gene ID= ENSG00000145029.13 TPM= 1.06 Transcript Type= protein_coding
chr3	49470132	49535615	49470132	49535615	+	ENST00000308775.6@DAG1	ENST00000308775.6	protein_coding	49470132,49510419,49530797	49470433,49510819,49535615	Gene ID= ENSG00000173402.11 TPM= 129.58 Transcript Type= protein_coding
chr3	49473885	49475104	49473885	49475104	-	transcript2495.chr3.nnic@NA	transcript2495.chr3.nnic	NA	49473885	49475104	Gene ID= novel_gene_chr3_2496 TPM= 3.19 Transcript Type= NA
chr3	49674339	49683503	49674339	49683503	+	transcript2507.chr3.nic@APEH	transcript2507.chr3.nic	protein_coding	49674339,49675694,49675891,49676056,49676378,49676609,49676777,49676903,49677573,49678852,49679593,49680541,49681101,49681722,49681887,49682348,49682546,49682843,49683040,49683237	49674413,49675787,49675966,49676219,49676515,49676700,49676817,49677024,49677633,49678949,49679644,49680629,49681239,49681805,49681967,49682436,49682736,49682945,49683146,49683503	Gene ID= ENSG00000164062.12 TPM= 8.5 Transcript Type= NA
chr3	49674002	49683963	49674002	49683963	+	ENST00000296456.9@APEH	ENST00000296456.9	protein_coding	49674002,49674489,49675183,49675694,49675891,49676056,49676378,49676609,49676777,49676903,49677573,49678852,49679593,49680541,49681101,49681722,49681887,49682348,49682546,49682843,49683040,49683237	49674413,49674621,49675309,49675787,49675966,49676219,49676515,49676700,49676817,49677024,49677633,49678949,49679644,49680629,49681239,49681805,49681967,49682436,49682736,49682945,49683146,49683963	Gene ID= ENSG00000164062.12 TPM= 7.97 Transcript Type= protein_coding
chr3	49689535	49721527	49689535	49721527	+	transcript2497.chr3.nnic@RNF123	transcript2497.chr3.nnic	protein_coding	49689535,49691130,49691425,49697143,49697363,49697885,49698052,49698440,49698755,49698980,49699468,49699668,49700227,49700472,49700636,49701491,49701811,49702083,49702334,49702633,49703427,49704650,49704984,49705534,49705982,49706791,49712479,49713513,49713738,49713910,49714090,49715575,49715822,49716102,49716393,49720511,49720800,49721020,49721185,49721457	49689606,49691247,49691509,49697222,49697457,49697939,49698137,49698526,49698822,49699105,49699582,49699772,49700352,49700564,49700709,49701608,49701910,49702144,49702405,49702753,49703528,49704756,49705182,49705679,49706065,49706898,49712656,49713587,49713825,49713997,49714174,49715714,49716010,49716177,49716477,49720653,49720894,49721105,49721352,49721527	Gene ID= ENSG00000164068.15 TPM= 4.25 Transcript Type= NA
chr3	49689499	49721527	49689499	49721527	+	ENST00000327697.10@RNF123	ENST00000327697.10	protein_coding	49689499,49691130,49691425,49697143,49697363,49697885,49698052,49698440,49698755,49698980,49699468,49699668,49700227,49700472,49700636,49701491,49701811,49702083,49702334,49702633,49703427,49704650,49704984,49705534,49705982,49706791,49712479,49713513,49713738,49713910,49714090,49715575,49715822,49716102,49716393,49720511,49720800,49721020,49721185	49689606,49691247,49691509,49697222,49697457,49697939,49698137,49698526,49698822,49699105,49699582,49699772,49700352,49700564,49700709,49701608,49701910,49702144,49702405,49702753,49703528,49704756,49705182,49705679,49706065,49706898,49712656,49713587,49713825,49713997,49714174,49715714,49716010,49716177,49716477,49720653,49720894,49721105,49721527	Gene ID= ENSG00000164068.15 TPM= 21.77 Transcript Type= protein_coding
chr3	49689600	49721529	49689600	49721529	+	transcript2501.chr3.nic@RNF123	transcript2501.chr3.nic	protein_coding	49689600,49691130,49691425,49697143,49697363,49697885,49698052,49698440,49698755,49698980,49699468,49699668,49700227,49700472,49700636,49701491,49701811,49702083,49702334,49702633,49703427,49704650,49704984,49705534,49705982,49706791,49712479,49713513,49713738,49713910,49714090,49715575,49715822,49716102,49716393,49720511,49720800,49721020,49721185	49689822,49691247,49691509,49697222,49697457,49697939,49698137,49698526,49698822,49699105,49699582,49699772,49700352,49700564,49700709,49701608,49701910,49702144,49702405,49702753,49703528,49704756,49705182,49705679,49706065,49706898,49712656,49713587,49713825,49713997,49714174,49715714,49716010,49716177,49716477,49720653,49720894,49721105,49721529	Gene ID= ENSG00000164068.15 TPM= 24.96 Transcript Type= NA
chr3	49716844	49723951	49716844	49723951	-	ENST00000480687.5@GMPPB	ENST00000480687.5	protein_coding	49723840,49723598,49723392,49723254,49722972,49722596,49722432,49722231,49721965,49716844	49723951,49723731,49723472,49723302,49723114,49722754,49722510,49722358,49722147,49721883	Gene ID= ENSG00000173540.12 TPM= 19.12 Transcript Type= protein_coding
chr3	49721476	49723941	49721476	49723941	-	transcript2524.chr3.nnic@GMPPB	transcript2524.chr3.nnic	protein_coding	49723598,49723392,49723254,49722972,49722596,49721965,49721476	49723941,49723472,49723302,49723114,49722754,49722147,49721883	Gene ID= ENSG00000173540.12 TPM= 2.12 Transcript Type= NA
chr3	49719912	49723999	49719912	49723999	-	transcript2525.chr3.nnic@GMPPB	transcript2525.chr3.nnic	protein_coding	49723598,49723392,49723254,49722972,49722596,49719912	49723999,49723472,49723302,49723114,49722754,49722147	Gene ID= ENSG00000173540.12 TPM= 2.12 Transcript Type= NA
chr3	49719924	49723951	49719924	49723951	-	ENST00000308375.10@GMPPB	ENST00000308375.10	protein_coding	49723598,49723392,49723254,49722972,49722596,49722432,49722231,49719924	49723951,49723472,49723302,49723114,49722754,49722510,49722358,49722147	Gene ID= ENSG00000173540.12 TPM= 5.31 Transcript Type= protein_coding
chr3	49721476	49723949	49721476	49723949	-	ENST00000308388.6@GMPPB	ENST00000308388.6	protein_coding	49723598,49723392,49723254,49722972,49722596,49722432,49722231,49721965,49721476	49723949,49723472,49723302,49723114,49722754,49722510,49722358,49722147,49721883	Gene ID= ENSG00000173540.12 TPM= 44.61 Transcript Type= protein_coding
chr3	49724294	49786527	49724294	49786527	-	ENST00000321599.8@IP6K1	ENST00000321599.8	protein_coding	49786354,49747818,49738212,49732791,49728103,49724294	49786527,49748168,49738422,49732972,49728278,49727655	Gene ID= ENSG00000176095.11 TPM= 15.4 Transcript Type= protein_coding
chr3	49724295	49786540	49724295	49786540	-	ENST00000395238.5@IP6K1	ENST00000395238.5	protein_coding	49786354,49738212,49732791,49728103,49724295	49786540,49738422,49732972,49728278,49727655	Gene ID= ENSG00000176095.11 TPM= 13.28 Transcript Type= protein_coding
chr3	49803240	49805032	49803240	49805032	+	transcript2536.chr3.nnic@FAM212A	transcript2536.chr3.nnic	protein_coding	49803240,49804181	49803363,49805032	Gene ID= ENSG00000185614.4 TPM= 2.12 Transcript Type= NA
chr3	49803254	49805030	49803254	49805030	+	ENST00000333323.4@FAM212A	ENST00000333323.4	protein_coding	49803254,49804181	49803443,49805030	Gene ID= ENSG00000185614.4 TPM= 6.37 Transcript Type= protein_coding
chr3	49805207	49813946	49805207	49813946	-	ENST00000333486.3@UBA7	ENST00000333486.3	protein_coding	49813732,49813479,49813249,49813062,49812648,49812408,49812109,49811870,49811273,49810984,49810752,49810517,49810263,49809978,49809815,49809542,49809390,49808976,49808386,49808020,49807736,49806073,49805897,49805207	49813946,49813647,49813383,49813168,49812738,49812543,49812206,49812016,49811455,49811091,49810832,49810672,49810428,49810183,49809879,49809725,49809464,49809159,49808468,49808112,49807927,49806165,49805997,49805437	Gene ID= ENSG00000182179.12 TPM= 1.59 Transcript Type= protein_coding
chr3	49805207	49813946	49805207	49813946	-	transcript2539.chr3.nnic@UBA7	transcript2539.chr3.nnic	protein_coding	49813732,49813479,49813249,49813062,49812648,49812408,49812109,49811870,49811273,49810984,49810752,49810517,49810263,49809978,49809815,49809542,49808976,49808386,49808020,49807736,49806073,49805897,49805207	49813946,49813647,49813383,49813168,49812738,49812543,49812206,49812016,49811455,49811091,49810832,49810672,49810428,49810183,49809879,49809725,49809159,49808468,49808112,49807927,49806165,49805997,49805437	Gene ID= ENSG00000182179.12 TPM= 4.78 Transcript Type= NA
chr3	49908862	49930145	49908862	49930145	-	ENST00000296473.7@MON1A	ENST00000296473.7	protein_coding	49929609,49913220,49911526,49910119,49909253,49908862	49930145,49913359,49912011,49910884,49909400,49909154	Gene ID= ENSG00000164077.13 TPM= 28.33 Transcript Type= protein_coding
chr3	49908873	49929889	49908873	49929889	-	ENST00000455683.6@MON1A	ENST00000455683.6	protein_coding	49929609,49913220,49910119,49909253,49908873	49929889,49913359,49910884,49909400,49909154	Gene ID= ENSG00000164077.13 TPM= 4.96 Transcript Type= protein_coding
chr3	49908873	49912004	49908873	49912004	-	transcript2551.chr3.nic@MON1A	transcript2551.chr3.nic	protein_coding	49910119,49909253,49908873	49912004,49909400,49909154	Gene ID= ENSG00000164077.13 TPM= 2.84 Transcript Type= NA
chr3	49940041	50077248	49940041	50077248	+	ENST00000443081.5@RBM6	ENST00000443081.5	protein_coding	49940041,49962576,49967198,49972059,49975323,49999440,50048245,50054335,50057728,50058402,50059649,50060956,50061140,50061462,50061962,50065031,50066242,50068690,50070455,50075201,50077008	49940225,49962685,49968748,49972148,49975392,49999513,50048319,50054395,50058003,50058562,50059746,50060998,50061221,50061547,50062108,50065126,50066502,50068764,50070552,50075330,50077248	Gene ID= ENSG00000004534.14 TPM= 2.66 Transcript Type= protein_coding
chr3	49940033	50077252	49940033	50077252	+	ENST00000266022.8@RBM6	ENST00000266022.8	protein_coding	49940033,49962576,49967470,49972059,49975323,49999440,50048245,50054335,50057728,50058402,50059649,50060956,50061140,50061462,50061962,50065031,50066242,50068690,50070455,50075201,50077008	49940225,49962685,49968748,49972148,49975392,49999513,50048319,50054395,50058003,50058562,50059746,50060998,50061221,50061547,50062108,50065126,50066502,50068764,50070552,50075330,50077252	Gene ID= ENSG00000004534.14 TPM= 7.97 Transcript Type= protein_coding
chr3	49940007	50077249	49940007	50077249	+	ENST00000442092.5@RBM6	ENST00000442092.5	protein_coding	49940007,49962576,50048245,50054335,50057728,50058402,50059649,50060956,50061140,50061462,50061962,50065031,50066242,50068690,50070455,50075201,50077008	49940225,49962685,50048319,50054395,50058003,50058562,50059746,50060998,50061221,50061547,50062108,50065126,50066502,50068764,50070552,50075330,50077249	Gene ID= ENSG00000004534.14 TPM= 13.28 Transcript Type= protein_coding
chr3	49940140	50077247	49940140	50077247	+	ENST00000454079.5@RBM6	ENST00000454079.5	protein_coding	49940140,49962576,49967198,49972059,49975323,49999440,50048245,50054335,50057728,50058402,50059649,50060956,50061140,50061462,50065031,50066242,50068690,50070455,50075201,50077008	49940225,49962685,49968748,49972148,49975392,49999513,50048319,50054395,50058003,50058562,50059746,50060998,50061221,50062108,50065126,50066502,50068764,50070552,50075330,50077247	Gene ID= ENSG00000004534.14 TPM= 3.72 Transcript Type= nonsense_mediated_decay
chr3	49969326	49969876	49969326	49969876	-	transcript2572.chr3.nnic@NA	transcript2572.chr3.nnic	NA	49969326	49969876	Gene ID= novel_gene_chr3_2573 TPM= 2.12 Transcript Type= NA
chr3	50088908	50119021	50088908	50119021	+	ENST00000347869.7@RBM5	ENST00000347869.7	protein_coding	50088908,50090382,50092043,50093720,50099982,50100532,50103083,50104248,50105077,50105549,50106767,50107482,50108070,50108232,50109603,50110379,50110679,50113383,50113950,50114180,50115428,50115906,50117074,50117250,50118331	50089029,50090451,50092208,50093875,50100051,50100605,50103166,50104308,50105142,50105709,50106864,50107569,50108147,50108304,50109688,50110463,50110770,50113544,50114099,50114251,50115607,50115980,50117171,50117379,50119021	Gene ID= ENSG00000003756.16 TPM= 29.74 Transcript Type= protein_coding
chr3	50101550	50118957	50101550	50118957	+	transcript2584.chr3.nic@RBM5	transcript2584.chr3.nic	protein_coding	50101550,50104248,50105077,50105549,50106767,50107482,50108070,50108232,50109603,50110379,50110679,50113383,50113950,50114180,50115428,50115906,50117074,50117250,50118331	50103166,50104308,50105142,50105709,50106864,50107569,50108147,50108304,50109688,50110463,50110770,50113544,50114099,50114251,50115607,50115980,50117171,50117379,50118957	Gene ID= ENSG00000003756.16 TPM= 4.25 Transcript Type= NA
chr3	50101825	50118957	50101825	50118957	+	transcript2585.chr3.nic@RBM5	transcript2585.chr3.nic	protein_coding	50101825,50104248,50105077,50105549,50106767,50107482,50108070,50108232,50109603,50110679,50113383,50113950,50114180,50115428,50115906,50117074,50117250,50118331	50103166,50104308,50105142,50105709,50106864,50107569,50108147,50108304,50109688,50110770,50113544,50114099,50114251,50115607,50115980,50117171,50117379,50118957	Gene ID= ENSG00000003756.16 TPM= 4.25 Transcript Type= NA
chr3	50088919	50102194	50088919	50102194	+	ENST00000469838.5@RBM5	ENST00000469838.5	protein_coding	50088919,50090382,50092043,50093720,50099982	50089029,50090451,50092208,50093875,50102194	Gene ID= ENSG00000003756.16 TPM= 11.68 Transcript Type= protein_coding
chr3	50088963	50118957	50088963	50118957	+	ENST00000464087.6@RBM5	ENST00000464087.6	protein_coding	50088963,50090382,50092043,50093720,50099982,50100532,50104248,50105077,50105549,50106767,50107018,50107482,50108070,50108232,50109603,50110379,50110679,50113383,50113950,50114180,50115428,50115906,50117074,50117250,50118331	50089029,50090451,50092208,50093875,50100051,50103166,50104308,50105142,50105709,50106864,50107087,50107569,50108147,50108304,50109688,50110463,50110770,50113544,50114099,50114251,50115607,50115980,50117171,50117379,50118957	Gene ID= ENSG00000003756.16 TPM= 20.18 Transcript Type= retained_intron
chr3	50154992	50189073	50154992	50189073	+	transcript2591.chr3.nic@SEMA3F	transcript2591.chr3.nic	protein_coding	50154992,50159575,50173793,50174052,50174231,50176768,50182284,50182644,50182904,50183186,50183420,50184592,50185443,50185666,50185889,50186281,50186613,50187705	50155564,50159734,50173953,50174114,50174350,50176861,50182403,50182783,50183018,50183255,50183564,50184814,50185531,50185707,50186046,50186348,50186746,50189073	Gene ID= ENSG00000001617.11 TPM= 10.62 Transcript Type= NA
chr3	50205246	50221486	50205246	50221486	+	ENST00000614032.4@SLC38A3	ENST00000614032.4	protein_coding	50205246,50214149,50214402,50214653,50215386,50215544,50215740,50217238,50217415,50217676,50217917,50218270,50218593,50218804,50219881,50220073	50205348,50214300,50214483,50214768,50215459,50215636,50215821,50217320,50217473,50217840,50217996,50218370,50218717,50218948,50219984,50221486	Gene ID= ENSG00000188338.14 TPM= 1.06 Transcript Type= protein_coding
chr3	50226292	50258898	50226292	50258898	+	ENST00000422163.5@GNAI2	ENST00000422163.5	protein_coding	50226292,50252100,50252397,50253024,50256192,50256723,50256937,50257500,50258368	50227193,50252142,50252538,50253184,50256320,50256852,50257090,50257714,50258898	Gene ID= ENSG00000114353.16 TPM= 8.32 Transcript Type= protein_coding
chr3	50235952	50259355	50235952	50259355	+	ENST00000313601.10@GNAI2	ENST00000313601.10	protein_coding	50235952,50252100,50252397,50253024,50256192,50256723,50256937,50257500,50258368	50236453,50252142,50252538,50253184,50256320,50256852,50257090,50257714,50259355	Gene ID= ENSG00000114353.16 TPM= 69.39 Transcript Type= protein_coding
chr3	50236156	50258910	50236156	50258910	+	transcript2604.chr3.nic@GNAI2	transcript2604.chr3.nic	protein_coding	50236156,50252100,50252397,50253024,50256192,50256723,50256937,50257500	50236453,50252142,50252538,50253184,50256320,50256852,50257090,50258910	Gene ID= ENSG00000114353.16 TPM= 6.19 Transcript Type= NA
chr3	50234358	50236643	50234358	50236643	-	transcript2609.chr3.nnic@NA	transcript2609.chr3.nnic	NA	50234358	50236643	Gene ID= novel_gene_chr3_2610 TPM= 2.12 Transcript Type= NA
chr3	50260244	50263357	50260244	50263357	+	transcript2673.chr3.nnic@NA	transcript2673.chr3.nnic	NA	50260244	50263357	Gene ID= novel_gene_chr3_2674 TPM= 3.19 Transcript Type= NA
chr3	50266641	50267371	50266641	50267371	-	ENST00000421735.1@SEMA3B-AS1	ENST00000421735.1	antisense_RNA	50267281,50266641	50267371,50266887	Gene ID= ENSG00000232352.1 TPM= 4.25 Transcript Type= antisense_RNA
chr3	50267599	50277165	50267599	50277165	+	transcript2612.chr3.nnic@SEMA3B	transcript2612.chr3.nnic	protein_coding	50267599,50268193,50269161,50270127,50270433,50270890,50271088,50271361,50273298,50273535,50273759,50273913,50274363,50274843,50275012,50275302,50275560,50275705,50276302	50267769,50268286,50269349,50270284,50270495,50271009,50271181,50271480,50273443,50273646,50273828,50274057,50274582,50274934,50275053,50275459,50275615,50275844,50277165	Gene ID= ENSG00000012171.19 TPM= 5.51 Transcript Type= NA
chr3	50267524	50277165	50267524	50277165	+	transcript2617.chr3.nic@SEMA3B	transcript2617.chr3.nic	protein_coding	50267524,50269161,50270127,50270433,50270890,50271088,50271361,50273298,50273535,50273759,50273916,50274363,50274843,50275012,50275302,50275560,50275705,50276302	50267769,50269349,50270284,50270495,50271009,50271181,50271480,50273443,50273646,50273828,50274057,50274582,50274934,50275053,50275459,50275615,50275844,50277165	Gene ID= ENSG00000012171.19 TPM= 31.54 Transcript Type= NA
chr3	50268948	50277165	50268948	50277165	+	transcript2620.chr3.nnic@SEMA3B	transcript2620.chr3.nnic	protein_coding	50268948,50269161,50270127,50270433,50270890,50271088,50271361,50273298,50273535,50273759,50273913,50274363,50274843,50275012,50275302,50275560,50275705,50276302	50269000,50269349,50270284,50270495,50271009,50271181,50271480,50273443,50273646,50273828,50274057,50274582,50274934,50275053,50275459,50275615,50275844,50277165	Gene ID= ENSG00000012171.19 TPM= 5.51 Transcript Type= NA
chr3	50267599	50277165	50267599	50277165	+	transcript2622.chr3.nic@SEMA3B	transcript2622.chr3.nic	protein_coding	50267599,50269161,50270127,50270433,50270890,50271088,50271361,50273298,50273535,50273916,50274363,50274843,50275012,50275302,50275560,50275705,50276302	50267769,50269349,50270284,50270495,50271009,50271181,50271480,50273443,50273828,50274057,50274582,50274934,50275053,50275459,50275615,50275844,50277165	Gene ID= ENSG00000012171.19 TPM= 7.11 Transcript Type= NA
chr3	50267524	50272726	50267524	50272726	+	transcript2654.chr3.nic@SEMA3B	transcript2654.chr3.nic	protein_coding	50267524,50269161,50270127,50270433,50271088,50271361	50267769,50269349,50270284,50271009,50271181,50272726	Gene ID= ENSG00000012171.19 TPM= 3.19 Transcript Type= NA
chr3	50267608	50277139	50267608	50277139	+	ENST00000618865.4@SEMA3B	ENST00000618865.4	protein_coding	50267608,50269161,50270127,50270433,50270890,50271088,50271361,50273298,50273535,50273759,50273913,50274363,50274843,50275012,50275302,50275560,50275705,50276302	50267769,50269349,50270284,50270495,50271009,50271181,50271480,50273443,50273646,50273828,50274057,50274582,50274934,50275053,50275459,50275615,50275844,50277139	Gene ID= ENSG00000012171.19 TPM= 58.57 Transcript Type= protein_coding
chr3	50269006	50277179	50269006	50277179	+	ENST00000616701.4@SEMA3B	ENST00000616701.4	protein_coding	50269006,50270127,50270433,50270890,50271088,50271361,50273298,50273535,50273759,50273913,50274363,50274843,50275012,50275302,50275560,50275705,50276302	50269349,50270284,50270495,50271009,50271181,50271480,50273443,50273646,50273828,50274057,50274582,50274934,50275053,50275459,50275615,50275844,50277179	Gene ID= ENSG00000012171.19 TPM= 9.5 Transcript Type= protein_coding
chr3	50269169	50277142	50269169	50277142	+	ENST00000433753.4@SEMA3B	ENST00000433753.4	protein_coding	50269169,50270127,50270433,50270890,50271088,50271361,50273298,50273535,50273759,50273916,50274363,50274843,50275012,50275302,50275560,50275705,50276302	50269349,50270284,50270495,50271009,50271181,50271480,50273443,50273646,50273828,50274057,50274582,50274934,50275053,50275459,50275615,50275844,50277142	Gene ID= ENSG00000012171.19 TPM= 2.27 Transcript Type= protein_coding
chr3	50279027	50288114	50279027	50288114	+	ENST00000316436.3@LSMEM2	ENST00000316436.3	protein_coding	50279027,50286471,50286674,50287069	50279171,50286584,50286862,50288114	Gene ID= ENSG00000179564.3 TPM= 45.67 Transcript Type= protein_coding
chr3	50287732	50292595	50287732	50292595	-	ENST00000417626.6@IFRD2	ENST00000417626.6	protein_coding	50292217,50290560,50290388,50290170,50289929,50289712,50289447,50289255,50288800,50288583,50288409,50287732	50292595,50290679,50290472,50290294,50290086,50289762,50289628,50289360,50288937,50288711,50288504,50288271	Gene ID= ENSG00000214706.10 TPM= 143.48 Transcript Type= protein_coding
chr3	50287743	50292433	50287743	50292433	-	transcript2634.chr3.nic@IFRD2	transcript2634.chr3.nic	protein_coding	50292217,50290560,50290170,50289929,50289712,50289447,50289255,50288800,50288583,50288409,50287743	50292433,50290679,50290294,50290086,50289762,50289628,50289360,50288937,50288711,50288504,50288271	Gene ID= ENSG00000214706.10 TPM= 12.48 Transcript Type= NA
chr3	50287743	50292433	50287743	50292433	-	transcript2637.chr3.nic@IFRD2	transcript2637.chr3.nic	protein_coding	50292217,50290560,50290388,50290170,50289929,50289712,50289447,50289255,50288800,50288583,50287743	50292433,50290679,50290472,50290294,50290086,50289762,50289628,50289360,50288937,50288711,50288504	Gene ID= ENSG00000214706.10 TPM= 10.18 Transcript Type= NA
chr3	50292831	50299468	50292831	50299468	-	ENST00000336307.5@HYAL3	ENST00000336307.5	protein_coding	50299213,50294709,50293632,50292831	50299468,50295619,50293721,50293515	Gene ID= ENSG00000186792.16 TPM= 4.25 Transcript Type= protein_coding
chr3	50296418	50299421	50296418	50299421	-	ENST00000443094.2@NAT6	ENST00000443094.2	protein_coding	50299213,50296418	50299421,50297672	Gene ID= ENSG00000243477.5 TPM= 7.44 Transcript Type= protein_coding
chr3	50299889	50303620	50299889	50303620	-	ENST00000395144.6@HYAL1	ENST00000395144.6	protein_coding	50303466,50302057,50300988,50299889	50303620,50302980,50301077,50300800	Gene ID= ENSG00000114378.16 TPM= 28.68 Transcript Type= protein_coding
chr3	50299895	50302766	50299895	50302766	-	transcript2693.chr3.nic@HYAL1	transcript2693.chr3.nic	protein_coding	50302057,50299895	50302766,50300800	Gene ID= ENSG00000114378.16 TPM= 5.84 Transcript Type= NA
chr3	50299890	50303572	50299890	50303572	-	ENST00000266031.8@HYAL1	ENST00000266031.8	protein_coding	50302057,50300988,50299890	50303572,50301077,50300800	Gene ID= ENSG00000114378.16 TPM= 31.33 Transcript Type= protein_coding
chr3	50317809	50322745	50317809	50322745	-	transcript2675.chr3.nic@HYAL2	transcript2675.chr3.nic	protein_coding	50322653,50320882,50319569,50318956,50317809	50322745,50321773,50320535,50319045,50318539	Gene ID= ENSG00000068001.13 TPM= 10.54 Transcript Type= NA
chr3	50317812	50322777	50317812	50322777	-	ENST00000442581.1@HYAL2	ENST00000442581.1	protein_coding	50322653,50321366,50319569,50318956,50317812	50322777,50321773,50320535,50319045,50318539	Gene ID= ENSG00000068001.13 TPM= 58.33 Transcript Type= protein_coding
chr3	50317796	50322906	50317796	50322906	-	ENST00000357750.8@HYAL2	ENST00000357750.8	protein_coding	50322653,50319569,50318956,50317796	50322906,50320535,50319045,50318539	Gene ID= ENSG00000068001.13 TPM= 77.09 Transcript Type= protein_coding
chr3	50317809	50322745	50317809	50322745	-	transcript2683.chr3.nic@HYAL2	transcript2683.chr3.nic	protein_coding	50322653,50319569,50318956,50317809	50322745,50321773,50319045,50318539	Gene ID= ENSG00000068001.13 TPM= 4.86 Transcript Type= NA
chr3	50317790	50322782	50317790	50322782	-	ENST00000447092.5@HYAL2	ENST00000447092.5	protein_coding	50319569,50318956,50317790	50322782,50319045,50318539	Gene ID= ENSG00000068001.13 TPM= 4.25 Transcript Type= protein_coding
chr3	50324907	50328243	50324907	50328243	-	ENST00000232496.4@TUSC2	ENST00000232496.4	protein_coding	50327954,50326357,50324907	50328243,50326477,50326186	Gene ID= ENSG00000114383.9 TPM= 29.74 Transcript Type= protein_coding
chr3	50329788	50340912	50329788	50340912	-	ENST00000359365.8@RASSF1	ENST00000359365.8	protein_coding	50340556,50337905,50332050,50331559,50331334,50329788	50340912,50338011,50332154,50331856,50331449,50330727	Gene ID= ENSG00000068028.17 TPM= 3.19 Transcript Type= protein_coding
chr3	50329782	50337464	50329782	50337464	-	ENST00000327761.7@RASSF1	ENST00000327761.7	protein_coding	50337173,50332050,50331559,50331334,50329782	50337464,50332154,50331856,50331449,50330727	Gene ID= ENSG00000068028.17 TPM= 36.11 Transcript Type= protein_coding
chr3	50347488	50351091	50347488	50351091	-	ENST00000232501.7@NPRL2	ENST00000232501.7	protein_coding	50350575,50349931,50349665,50349386,50348874,50348685,50348527,50348317,50348124,50347759,50347488	50351091,50350022,50349833,50349494,50349010,50348782,50348563,50348410,50348241,50347901,50347673	Gene ID= ENSG00000114388.12 TPM= 20.45 Transcript Type= protein_coding
chr3	50347488	50350761	50347488	50350761	-	transcript2697.chr3.nic@NPRL2	transcript2697.chr3.nic	protein_coding	50349931,50349665,50349386,50348874,50348685,50348527,50348317,50348124,50347759,50347488	50350761,50349833,50349494,50349010,50348782,50348563,50348410,50348241,50347901,50347673	Gene ID= ENSG00000114388.12 TPM= 2.39 Transcript Type= NA
chr3	50347488	50350767	50347488	50350767	-	ENST00000487632.5@NPRL2	ENST00000487632.5	protein_coding	50349931,50349665,50349386,50348685,50348527,50348317,50348124,50347759,50347488	50350767,50349833,50349490,50349010,50348563,50348410,50348241,50347901,50347673	Gene ID= ENSG00000114388.12 TPM= 1.33 Transcript Type= retained_intron
chr3	50347499	50350766	50347499	50350766	-	ENST00000479512.5@NPRL2	ENST00000479512.5	protein_coding	50349933,50349665,50349386,50348874,50348685,50348527,50348317,50348124,50347759,50347499	50350766,50349828,50349490,50349010,50348782,50348563,50348410,50348241,50347901,50347673	Gene ID= ENSG00000114388.12 TPM= 2.39 Transcript Type= retained_intron
chr3	50350695	50354079	50350695	50354079	+	ENST00000425346.5@CYB561D2	ENST00000425346.5	protein_coding	50350695,50351409,50352009,50353241	50350984,50351560,50352046,50354079	Gene ID= ENSG00000114395.10 TPM= 11.15 Transcript Type= protein_coding
chr3	50350845	50354069	50350845	50354069	+	ENST00000232508.9@CYB561D2	ENST00000232508.9	protein_coding	50350845,50351343,50352009,50353241	50350984,50351560,50352046,50354069	Gene ID= ENSG00000114395.10 TPM= 7.97 Transcript Type= protein_coding
chr3	50350858	50354032	50350858	50354032	+	ENST00000418577.1@CYB561D2	ENST00000418577.1	protein_coding	50350858,50352009,50353241	50351560,50352046,50354032	Gene ID= ENSG00000114395.10 TPM= 2.12 Transcript Type= protein_coding
chr3	50354749	50359610	50354749	50359610	-	ENST00000266025.3@TMEM115	ENST00000266025.3	protein_coding	50358213,50354749	50359610,50355547	Gene ID= ENSG00000126062.3 TPM= 98.78 Transcript Type= protein_coding
chr3	50558031	50567729	50558031	50567729	-	transcript2716.chr3.nnic@C3orf18	transcript2716.chr3.nnic	protein_coding	50567463,50565454,50561722,50560917,50558031	50567729,50565861,50561747,50561064,50559737	Gene ID= ENSG00000088543.14 TPM= 3.4 Transcript Type= NA
chr3	50558034	50567636	50558034	50567636	-	transcript2721.chr3.nnic@C3orf18	transcript2721.chr3.nnic	protein_coding	50567463,50565466,50561722,50558034	50567636,50565861,50561747,50559737	Gene ID= ENSG00000088543.14 TPM= 3.4 Transcript Type= NA
chr3	50558034	50567747	50558034	50567747	-	transcript2722.chr3.nnic@C3orf18	transcript2722.chr3.nnic	protein_coding	50567463,50561722,50558034	50567747,50561747,50559737	Gene ID= ENSG00000088543.14 TPM= 9.77 Transcript Type= NA
chr3	50558025	50567665	50558025	50567665	-	ENST00000426034.5@C3orf18	ENST00000426034.5	protein_coding	50567463,50565466,50561722,50560917,50558025	50567665,50565861,50561747,50561064,50559737	Gene ID= ENSG00000088543.14 TPM= 14.02 Transcript Type= protein_coding
chr3	50558031	50567751	50558031	50567751	-	ENST00000357203.7@C3orf18	ENST00000357203.7	protein_coding	50567463,50566006,50565466,50561722,50560917,50558031	50567751,50566094,50565861,50561747,50561064,50559737	Gene ID= ENSG00000088543.14 TPM= 9.77 Transcript Type= protein_coding
chr3	50569197	50584935	50569197	50584935	+	ENST00000232854.8@HEMK1	ENST00000232854.8	protein_coding	50569197,50570931,50571710,50572115,50577052,50577509,50577826,50578821,50579844,50580116,50580381	50569574,50571332,50571801,50572208,50577186,50577573,50577875,50578926,50579939,50580229,50584935	Gene ID= ENSG00000114735.9 TPM= 7.44 Transcript Type= protein_coding
chr3	50569493	50580672	50569493	50580672	+	ENST00000455834.5@HEMK1	ENST00000455834.5	protein_coding	50569493,50570931,50571710,50572115,50577052,50577509,50577826,50578821,50579844,50580116,50580381	50569545,50571332,50571801,50572208,50577186,50577573,50577875,50578926,50579939,50580229,50580672	Gene ID= ENSG00000114735.9 TPM= 9.56 Transcript Type= protein_coding
chr3	50606490	50611761	50606490	50611761	-	ENST00000491847.1@CISH	ENST00000491847.1	protein_coding	50608373,50606490	50611761,50608142	Gene ID= ENSG00000114737.15 TPM= 23.37 Transcript Type= retained_intron
chr3	50617371	50649289	50617371	50649289	+	transcript2748.chr3.nic@MAPKAPK3	transcript2748.chr3.nic	protein_coding	50617371,50640366,50641707,50642253,50644409,50645710,50646140,50646740,50647123,50647894	50617784,50640505,50641771,50642332,50644532,50645785,50646264,50646825,50647203,50649289	Gene ID= ENSG00000114738.10 TPM= 81.14 Transcript Type= NA
chr3	50617131	50649297	50617131	50649297	+	ENST00000621469.4@MAPKAPK3	ENST00000621469.4	protein_coding	50617131,50617514,50640366,50641707,50642253,50644409,50645710,50646140,50646740,50647123,50647894	50617241,50617784,50640505,50641771,50642332,50644532,50645785,50646264,50646825,50647203,50649297	Gene ID= ENSG00000114738.10 TPM= 187.09 Transcript Type= protein_coding
chr3	50617170	50649288	50617170	50649288	+	ENST00000357955.6@MAPKAPK3	ENST00000357955.6	protein_coding	50617170,50617514,50640366,50641707,50642253,50644409,50645710,50646140,50646740,50647123,50647894	50617226,50617784,50640505,50641771,50642332,50644532,50645785,50646264,50646825,50647203,50649288	Gene ID= ENSG00000114738.10 TPM= 102.56 Transcript Type= protein_coding
chr3	50648258	50651008	50648258	50651008	+	transcript2757.chr3.nnic@NA	transcript2757.chr3.nnic	NA	50648258	50651008	Gene ID= novel_gene_chr3_2758 TPM= 4.4 Transcript Type= NA
chr3	50649394	50653808	50649394	50653808	+	transcript2759.chr3.nnic@NA	transcript2759.chr3.nnic	NA	50649394	50653808	Gene ID= novel_gene_chr3_2760 TPM= 3.72 Transcript Type= NA
chr3	50651280	50657141	50651280	50657141	-	transcript2761.chr3.nnic@NA	transcript2761.chr3.nnic	NA	50651280	50657141	Gene ID= novel_gene_chr3_2762 TPM= 68.51 Transcript Type= NA
chr3	50651280	50657141	50651280	50657141	-	transcript2763.chr3.nnic@NA	transcript2763.chr3.nnic	NA	50651280	50657141	Gene ID= novel_gene_chr3_2764 TPM= 2.12 Transcript Type= NA
chr3	50661922	50663148	50661922	50663148	+	transcript2765.chr3.nnic@NA	transcript2765.chr3.nnic	NA	50661922	50663148	Gene ID= novel_gene_chr3_2766 TPM= 16.99 Transcript Type= NA
chr3	50662939	50663365	50662939	50663365	+	transcript2767.chr3.nnic@NA	transcript2767.chr3.nnic	NA	50662939	50663365	Gene ID= novel_gene_chr3_2766 TPM= 2.12 Transcript Type= NA
chr3	50674902	50934751	50674902	50934751	+	transcript2775.chr3.nic@DOCK3	transcript2775.chr3.nic	protein_coding	50674902,50778675,50841675,50890026,50933981	50675300,50778758,50841715,50890081,50934751	Gene ID= ENSG00000088538.12 TPM= 3.19 Transcript Type= NA
chr3	50675241	51384198	50675241	51384198	+	ENST00000266037.9@DOCK3	ENST00000266037.9	protein_coding	50675241,50778675,50841675,50890026,50933981,51064448,51075356,51089243,51090230,51146549,51159244,51160555,51208774,51214122,51225649,51227283,51227982,51228661,51229512,51236345,51237490,51246726,51260156,51270815,51275079,51277608,51280106,51310232,51312004,51312476,51312844,51314980,51330138,51333001,51333158,51338359,51338935,51341237,51348852,51350288,51354882,51356089,51356407,51356962,51357758,51357961,51360511,51361859,51362527,51374469,51375748,51380125,51381050	50675300,50778758,50841715,50890081,50934077,51064596,51075440,51089284,51090384,51146630,51159304,51160702,51208862,51214247,51225773,51227445,51228088,51228832,51229609,51236428,51237590,51246807,51260326,51271007,51275206,51277754,51280204,51310326,51312079,51312576,51312902,51315128,51330223,51333027,51333253,51338419,51339028,51341385,51348938,51350392,51355023,51356255,51356493,51357141,51357841,51358077,51360632,51361997,51362674,51374587,51375835,51380207,51384198	Gene ID= ENSG00000088538.12 TPM= 3.19 Transcript Type= protein_coding
chr3	51385047	51389397	51385047	51389397	+	ENST00000528157.5@MANF	ENST00000528157.5	protein_coding	51385047,51386208,51387737,51388905	51385436,51386335,51387878,51389397	Gene ID= ENSG00000145050.15 TPM= 2.12 Transcript Type= protein_coding
chr3	51391268	51397908	51391268	51397908	+	ENST00000563281.1@RBM15B	ENST00000563281.1	protein_coding	51391268	51397908	Gene ID= ENSG00000259956.1 TPM= 12.75 Transcript Type= protein_coding
chr3	51549726	51552183	51549726	51552183	-	transcript2801.chr3.nnic@NA	transcript2801.chr3.nnic	NA	51549726	51552183	Gene ID= novel_gene_chr3_2802 TPM= 3.19 Transcript Type= NA
chr3	51671175	51704322	51671175	51704322	+	ENST00000457573.5@TEX264	ENST00000457573.5	protein_coding	51671175,51672341,51674271,51684413,51699406,51703724	51671288,51672392,51674562,51684634,51699574,51704322	Gene ID= ENSG00000164081.12 TPM= 2.5 Transcript Type= protein_coding
chr3	51671175	51704322	51671175	51704322	+	ENST00000611400.4@TEX264	ENST00000611400.4	protein_coding	51671175,51672210,51674271,51684413,51699406,51703724	51671288,51672301,51674562,51684634,51699574,51704322	Gene ID= ENSG00000164081.12 TPM= 4.62 Transcript Type= protein_coding
chr3	51671274	51704321	51671274	51704321	+	ENST00000395057.5@TEX264	ENST00000395057.5	protein_coding	51671274,51674271,51684413,51699406,51703724	51671547,51674562,51684634,51699574,51704321	Gene ID= ENSG00000164081.12 TPM= 6.74 Transcript Type= protein_coding
chr3	51671175	51704322	51671175	51704322	+	ENST00000614067.4@TEX264	ENST00000614067.4	protein_coding	51671175,51674271,51699406,51703724	51671288,51674562,51699574,51704322	Gene ID= ENSG00000164081.12 TPM= 2.76 Transcript Type= protein_coding
chr3	51671232	51704323	51671232	51704323	+	ENST00000341333.9@TEX264	ENST00000341333.9	protein_coding	51671232,51674271,51684413,51699406,51703724	51671288,51674562,51684634,51699574,51704323	Gene ID= ENSG00000164081.12 TPM= 56.67 Transcript Type= protein_coding
chr3	51671255	51704283	51671255	51704283	+	ENST00000415259.5@TEX264	ENST00000415259.5	protein_coding	51671255,51674271,51684413,51699406,51703724	51672301,51674562,51684634,51699574,51704283	Gene ID= ENSG00000164081.12 TPM= 1.06 Transcript Type= protein_coding
chr3	51933430	51941941	51933430	51941941	-	ENST00000232888.6@RRP9	ENST00000232888.6	protein_coding	51941781,51941409,51938095,51937669,51937545,51937192,51936431,51936257,51935592,51935342,51935197,51934631,51934472,51933708,51933430	51941941,51941491,51938204,51937736,51937586,51937318,51936555,51936349,51935692,51935476,51935259,51934776,51934551,51933781,51933599	Gene ID= ENSG00000114767.6 TPM= 18.06 Transcript Type= protein_coding
chr3	51942345	51948862	51942345	51948862	+	ENST00000417220.6@PARP3	ENST00000417220.6	protein_coding	51942345,51942930,51943349,51944089,51944390,51944778,51944998,51945495,51945853,51946166,51947740,51948311	51942708,51943046,51943538,51944217,51944578,51944910,51945224,51945644,51945939,51946343,51947895,51948862	Gene ID= ENSG00000041880.14 TPM= 5.84 Transcript Type= protein_coding
chr3	51942759	51948862	51942759	51948862	+	transcript2817.chr3.nic@PARP3	transcript2817.chr3.nic	protein_coding	51942759,51943349,51944089,51944390,51944778,51944998,51945495,51945853,51946166,51947740,51948311	51943046,51943538,51944217,51944578,51944910,51945224,51945644,51945939,51946343,51947895,51948862	Gene ID= ENSG00000041880.14 TPM= 7.97 Transcript Type= NA
chr3	51942330	51948862	51942330	51948862	+	transcript2819.chr3.nic@PARP3	transcript2819.chr3.nic	protein_coding	51942330,51943354,51944089,51944390,51944778,51945495,51945853,51946166,51947740,51948311	51942708,51943538,51944217,51944578,51945224,51945644,51945939,51946343,51947895,51948862	Gene ID= ENSG00000041880.14 TPM= 3.19 Transcript Type= NA
chr3	51943286	51948862	51943286	51948862	+	transcript2822.chr3.nic@PARP3	transcript2822.chr3.nic	protein_coding	51943286,51944089,51944390,51944778,51944998,51945495,51945853,51946166,51947740,51948311	51943538,51944217,51944578,51944910,51945224,51945644,51945939,51946343,51947895,51948862	Gene ID= ENSG00000041880.14 TPM= 4.25 Transcript Type= NA
chr3	51942330	51948862	51942330	51948862	+	transcript2823.chr3.nic@PARP3	transcript2823.chr3.nic	protein_coding	51942330,51943354,51944089,51944390,51945495,51945853,51946166,51947740,51948311	51942708,51943538,51944217,51945224,51945644,51945939,51946343,51947895,51948862	Gene ID= ENSG00000041880.14 TPM= 3.19 Transcript Type= NA
chr3	51942371	51948603	51942371	51948603	+	ENST00000471971.5@PARP3	ENST00000471971.5	protein_coding	51942371,51943349,51944089,51944390,51944778,51944998,51945495,51945853,51946166,51947740,51948311	51942708,51943538,51944217,51944578,51944910,51945224,51945644,51945939,51946343,51947895,51948603	Gene ID= ENSG00000041880.14 TPM= 1.06 Transcript Type= nonsense_mediated_decay
chr3	51957458	51967511	51957458	51967511	-	transcript2834.chr3.nic@PCBP4	transcript2834.chr3.nic	protein_coding	51967326,51962810,51961160,51961010,51960866,51960526,51960189,51959895,51959577,51959367,51959229,51959047,51958790,51957458	51967511,51962892,51961304,51961033,51960898,51960642,51960320,51960023,51959651,51959411,51959292,51959099,51958959,51958349	Gene ID= ENSG00000090097.21 TPM= 13.34 Transcript Type= NA
chr3	51957495	51966266	51957495	51966266	-	transcript2843.chr3.nic@PCBP4	transcript2843.chr3.nic	protein_coding	51962810,51961160,51961010,51960866,51960526,51960189,51959895,51959577,51959367,51959229,51959047,51958790,51957495	51966266,51961304,51961033,51960898,51960642,51960320,51960023,51959651,51959411,51959292,51959099,51958959,51958152	Gene ID= ENSG00000090097.21 TPM= 3.19 Transcript Type= NA
chr3	51957495	51967505	51957495	51967505	-	transcript2844.chr3.nic@PCBP4	transcript2844.chr3.nic	protein_coding	51967326,51961160,51961010,51960866,51960526,51960189,51959895,51959577,51959367,51959229,51959047,51958790,51957495	51967505,51961304,51961033,51960898,51960642,51960320,51960023,51959651,51959411,51959292,51959099,51958959,51958152	Gene ID= ENSG00000090097.21 TPM= 6.49 Transcript Type= NA
chr3	51957458	51967505	51957458	51967505	-	transcript2849.chr3.nic@PCBP4	transcript2849.chr3.nic	protein_coding	51967326,51961160,51961010,51960866,51960526,51960189,51959577,51959367,51959229,51959047,51958790,51957458	51967505,51961304,51961033,51960898,51960642,51960320,51959651,51959411,51959292,51959099,51958959,51958349	Gene ID= ENSG00000090097.21 TPM= 11.8 Transcript Type= NA
chr3	51957454	51967457	51957454	51967457	-	ENST00000355852.6@PCBP4	ENST00000355852.6	protein_coding	51967326,51961160,51961010,51960866,51960526,51960189,51959895,51959577,51959367,51959229,51959047,51958790,51957454	51967457,51961304,51961033,51960898,51960642,51960320,51960023,51959651,51959411,51959292,51959099,51958959,51958349	Gene ID= ENSG00000090097.21 TPM= 67.51 Transcript Type= protein_coding
chr3	51957458	51967445	51957458	51967445	-	ENST00000461554.5@PCBP4	ENST00000461554.5	protein_coding	51967326,51961941,51961160,51961010,51960866,51960526,51960189,51959895,51959577,51959367,51959229,51959047,51958790,51957458	51967445,51962088,51961304,51961033,51960898,51960642,51960320,51960023,51959651,51959411,51959292,51959099,51958959,51958349	Gene ID= ENSG00000090097.21 TPM= 12.28 Transcript Type= protein_coding
chr3	51968510	51983409	51968510	51983409	-	ENST00000483233.5@ABHD14B	ENST00000483233.5	protein_coding	51983201,51973965,51971460,51969943,51968510	51983409,51974234,51971698,51970184,51969605	Gene ID= ENSG00000114779.19 TPM= 4.78 Transcript Type= protein_coding
chr3	51968516	51974630	51968516	51974630	-	ENST00000487005.1@ABHD14B	ENST00000487005.1	protein_coding	51973965,51969943,51968516	51974630,51970184,51969605	Gene ID= ENSG00000114779.19 TPM= 2.66 Transcript Type= processed_transcript
chr3	51973663	51981196	51973663	51981196	+	transcript2865.chr3.nic@ABHD14A	transcript2865.chr3.nic	protein_coding	51973663,51977871,51978259,51980393,51980836	51973905,51978082,51978374,51980628,51981196	Gene ID= ENSG00000248487.8 TPM= 2.66 Transcript Type= NA
chr3	51975068	51981196	51975068	51981196	+	ENST00000273596.7@ABHD14A	ENST00000273596.7	protein_coding	51975068,51977871,51978259,51980393,51980836	51975204,51978082,51978374,51980628,51981196	Gene ID= ENSG00000248487.8 TPM= 20.71 Transcript Type= protein_coding
chr3	51983435	51989197	51983435	51989197	+	ENST00000636880.1@ACY1	ENST00000636880.1	protein_coding	51983435,51984047,51985361,51985852,51986255,51986415,51986605,51986988,51987147,51987309,51987556,51988524,51988766,51988911	51983589,51984158,51985465,51985946,51986331,51986504,51986661,51987061,51987196,51987453,51987624,51988603,51988826,51989197	Gene ID= ENSG00000243989.8 TPM= 4.25 Transcript Type= nonsense_mediated_decay
chr3	51983443	51989197	51983443	51989197	+	ENST00000476854.5@ACY1	ENST00000476854.5	protein_coding	51983443,51984047,51985207,51985361,51985852,51986255,51986415,51986605,51986988,51987556,51988524,51988766,51988911	51983589,51984158,51985271,51985465,51985946,51986331,51986504,51986661,51987061,51987624,51988603,51988826,51989197	Gene ID= ENSG00000243989.8 TPM= 2.12 Transcript Type= protein_coding
chr3	51993600	51995942	51993600	51995942	-	ENST00000294189.10@RPL29	ENST00000294189.10	protein_coding	51995857,51995425,51995042,51993600	51995942,51995469,51995106,51994126	Gene ID= ENSG00000162244.10 TPM= 154.01 Transcript Type= protein_coding
chr3	51993629	51995830	51993629	51995830	-	ENST00000479017.5@RPL29	ENST00000479017.5	protein_coding	51995769,51995425,51995042,51993629	51995830,51995469,51995106,51994126	Gene ID= ENSG00000162244.10 TPM= 28.68 Transcript Type= protein_coding
chr3	52022638	52027236	52022638	52027236	+	transcript2881.chr3.nnic@NA	transcript2881.chr3.nnic	NA	52022638	52027236	Gene ID= novel_gene_chr3_2882 TPM= 2.12 Transcript Type= NA
chr3	52048919	52056550	52048919	52056550	-	ENST00000495880.1@DUSP7	ENST00000495880.1	protein_coding	52055850,52053940,52048919	52056550,52054374,52051122	Gene ID= ENSG00000164086.9 TPM= 74.35 Transcript Type= protein_coding
chr3	52198132	52214324	52198132	52214324	+	ENST00000310271.6@ALAS1	ENST00000310271.6	protein_coding	52198132,52199221,52202507,52203863,52204693,52205839,52206572,52208083,52211283,52212258,52214020	52198255,52199440,52202734,52204012,52204915,52206023,52206751,52208247,52211551,52212420,52214324	Gene ID= ENSG00000023330.14 TPM= 38.32 Transcript Type= protein_coding
chr3	52198086	52214180	52198086	52214180	+	ENST00000469224.5@ALAS1	ENST00000469224.5	protein_coding	52198086,52199210,52202507,52203863,52204693,52205839,52206572,52208083,52211283,52212258,52214020	52198255,52199440,52202734,52204012,52204915,52206023,52206751,52208247,52211551,52212420,52214180	Gene ID= ENSG00000023330.14 TPM= 7.7 Transcript Type= protein_coding
chr3	52198094	52214327	52198094	52214327	+	ENST00000394965.6@ALAS1	ENST00000394965.6	protein_coding	52198094,52198672,52199221,52202507,52203863,52204693,52205839,52206572,52208083,52211283,52212258,52214020	52198255,52198848,52199440,52202734,52204012,52204915,52206023,52206751,52208247,52211551,52212420,52214327	Gene ID= ENSG00000023330.14 TPM= 4.86 Transcript Type= protein_coding
chr3	52198144	52214292	52198144	52214292	+	ENST00000484952.5@ALAS1	ENST00000484952.5	protein_coding	52198144,52198672,52199210,52202507,52203863,52204693,52205839,52206572,52208083,52211283,52212258,52214020	52198255,52198848,52199440,52202734,52204012,52204915,52206023,52206751,52208247,52211551,52212420,52214292	Gene ID= ENSG00000023330.14 TPM= 24.51 Transcript Type= protein_coding
chr3	52228610	52239260	52228610	52239260	-	ENST00000305533.9@TWF2	ENST00000305533.9	protein_coding	52238992,52235029,52231944,52231444,52231127,52230870,52229920,52229661,52228610	52239260,52235106,52232122,52231539,52231231,52230995,52230070,52229782,52229201	Gene ID= ENSG00000247596.8 TPM= 118.43 Transcript Type= protein_coding
chr3	52228610	52235294	52228610	52235294	-	transcript2903.chr3.nic@TWF2	transcript2903.chr3.nic	protein_coding	52235029,52231944,52231444,52231127,52230870,52229920,52229661,52228610	52235294,52232122,52231539,52231231,52230995,52230070,52229782,52229201	Gene ID= ENSG00000247596.8 TPM= 89.75 Transcript Type= NA
chr3	52239205	52250595	52239205	52250595	+	transcript2896.chr3.nnic@PPM1M	transcript2896.chr3.nnic	protein_coding	52239205,52245129,52245393,52246695,52246974,52247682,52248153,52248335,52248637,52248956,52249174,52249670	52239246,52245240,52246048,52246812,52247228,52247794,52248237,52248453,52248700,52249063,52249322,52250595	Gene ID= ENSG00000164088.17 TPM= 4.6 Transcript Type= NA
chr3	52239220	52250595	52239220	52250595	+	transcript2897.chr3.nnic@PPM1M	transcript2897.chr3.nnic	protein_coding	52239220,52245129,52245393,52246695,52246974,52247682,52248153,52248335,52248637,52248956,52249174,52249670	52239435,52245240,52246048,52246812,52247228,52247794,52248237,52248453,52248700,52249063,52249322,52250595	Gene ID= ENSG00000164088.17 TPM= 4.6 Transcript Type= NA
chr3	52245793	52250595	52245793	52250595	+	ENST00000323588.8@PPM1M	ENST00000323588.8	protein_coding	52245793,52246695,52246974,52247682,52248153,52248335,52248637,52248956,52249174,52249670	52246048,52246812,52247228,52247794,52248237,52248453,52248700,52249063,52249322,52250595	Gene ID= ENSG00000164088.17 TPM= 14.16 Transcript Type= protein_coding
chr3	52254421	52278643	52254421	52278643	-	ENST00000296490.7@WDR82	ENST00000296490.7	protein_coding	52278201,52270712,52266952,52261380,52260385,52259717,52259197,52258536,52254421	52278643,52270809,52267018,52261479,52260501,52259872,52259266,52258678,52257519	Gene ID= ENSG00000164091.11 TPM= 8.5 Transcript Type= protein_coding
chr3	52287820	52293475	52287820	52293475	+	ENST00000486393.5@GLYCTK	ENST00000486393.5	protein_coding	52287820,52290304,52290960,52291745,52292260	52287876,52290719,52291111,52291922,52293475	Gene ID= ENSG00000168237.17 TPM= 1.41 Transcript Type= nonsense_mediated_decay
chr3	52291353	52293475	52291353	52293475	+	transcript2907.chr3.nic@GLYCTK	transcript2907.chr3.nic	protein_coding	52291353,52292260	52291922,52293475	Gene ID= ENSG00000168237.17 TPM= 3.54 Transcript Type= NA
chr3	52287856	52293476	52287856	52293476	+	ENST00000436784.6@GLYCTK	ENST00000436784.6	protein_coding	52287856,52290304,52290960,52291747,52292260	52287876,52290719,52291111,52291922,52293476	Gene ID= ENSG00000168237.17 TPM= 1.41 Transcript Type= protein_coding
chr3	52401013	52410350	52401013	52410350	-	ENST00000460680.5@BAP1	ENST00000460680.5	protein_coding	52409842,52409714,52409554,52408474,52407958,52407399,52407174,52406829,52406253,52405765,52405110,52404453,52403416,52403138,52402779,52402602,52401013	52410350,52409743,52409608,52408606,52408077,52407460,52407316,52406907,52406376,52405912,52405294,52404586,52403894,52403298,52402871,52402674,52402421	Gene ID= ENSG00000163930.9 TPM= 57.36 Transcript Type= protein_coding
chr3	52401013	52405521	52401013	52405521	-	transcript2918.chr3.nic@BAP1	transcript2918.chr3.nic	protein_coding	52405110,52404453,52403416,52403138,52402779,52402602,52401013	52405521,52404586,52403894,52403298,52402871,52402674,52402421	Gene ID= ENSG00000163930.9 TPM= 25.49 Transcript Type= NA
chr3	52410650	52414836	52410650	52414836	+	transcript2921.chr3.nic@PHF7	transcript2921.chr3.nic	protein_coding	52410650,52412811,52413996,52414496,52414728	52411339,52412920,52414048,52414587,52414836	Gene ID= ENSG00000010318.20 TPM= 2.12 Transcript Type= NA
chr3	52451102	52454070	52451102	52454070	-	ENST00000232975.7@TNNC1	ENST00000232975.7	protein_coding	52453992,52452483,52452106,52451744,52451391,52451102	52454070,52452513,52452252,52451858,52451527,52451306	Gene ID= ENSG00000114854.7 TPM= 6238.07 Transcript Type= protein_coding
chr3	52455508	52493071	52455508	52493071	+	ENST00000345716.8@NISCH	ENST00000345716.8	protein_coding	52455508,52457843,52458662,52470859,52471814,52472303,52473734,52476447,52477574,52478097,52478449,52479749,52480184,52484513,52485778,52487196,52489336,52490075,52490705,52491352,52491872	52455734,52457926,52458844,52470907,52471977,52472398,52473829,52476599,52477642,52478282,52478577,52479862,52480295,52484637,52485827,52488605,52489678,52490231,52490833,52491513,52493071	Gene ID= ENSG00000010322.15 TPM= 74.35 Transcript Type= protein_coding
chr3	52455617	52481914	52455617	52481914	+	ENST00000420808.2@NISCH	ENST00000420808.2	protein_coding	52455617,52457843,52458662,52470859,52471814,52472303,52473734,52476447,52477574,52478097,52478449,52479749,52480184,52480879	52455734,52457926,52458844,52470907,52471977,52472398,52473829,52476599,52477642,52478282,52478577,52479862,52480295,52481914	Gene ID= ENSG00000010322.15 TPM= 23.37 Transcript Type= protein_coding
chr3	52524387	52533845	52524387	52533845	-	transcript2958.chr3.nic@NT5DC2	transcript2958.chr3.nic	protein_coding	52533506,52529150,52528861,52528637,52528446,52528183,52528013,52527829,52527617,52527294,52525209,52524963,52524817,52524387	52533845,52529334,52528935,52528692,52528539,52528311,52528073,52527931,52527718,52527375,52525295,52525103,52524881,52524611	Gene ID= ENSG00000168268.10 TPM= 9.56 Transcript Type= NA
chr3	52524389	52533791	52524389	52533791	-	transcript2968.chr3.nnic@NT5DC2	transcript2968.chr3.nnic	protein_coding	52533506,52529150,52528861,52528637,52528446,52528183,52528013,52527829,52527617,52527294,52525209,52524963,52524389	52533791,52529334,52528935,52528692,52528539,52528311,52528073,52527931,52527718,52527375,52525295,52525103,52524611	Gene ID= ENSG00000168268.10 TPM= 5.31 Transcript Type= NA
chr3	52524389	52533777	52524389	52533777	-	ENST00000422318.6@NT5DC2	ENST00000422318.6	protein_coding	52533506,52529150,52528861,52528637,52528446,52528183,52528013,52527829,52527617,52527294,52525209,52524963,52524817,52524389	52533777,52529334,52528935,52528692,52528539,52528311,52528073,52527931,52527718,52527375,52525295,52525103,52524881,52524731	Gene ID= ENSG00000168268.10 TPM= 192.78 Transcript Type= protein_coding
chr3	52536605	52541891	52536605	52541891	+	ENST00000477703.5@SMIM4	ENST00000477703.5	protein_coding	52536605,52540424	52536906,52541891	Gene ID= ENSG00000168273.7 TPM= 92.41 Transcript Type= protein_coding
chr3	52536602	52540525	52536602	52540525	+	ENST00000307106.3@SMIM4	ENST00000307106.3	protein_coding	52536602,52540424	52536773,52540525	Gene ID= ENSG00000168273.7 TPM= 182.69 Transcript Type= protein_coding
chr3	52603537	52685951	52603537	52685951	-	transcript2977.chr3.nnic@PBRM1	transcript2977.chr3.nnic	protein_coding	52685749,52682092,52681695,52679574,52678500,52668498,52662133,52658199,52651742,52648344,52644704,52643248,52641954,52634602,52628894,52627273,52624897,52617262,52615351,52609313,52603537	52685951,52682233,52681820,52679726,52678597,52668645,52662276,52658315,52651810,52648442,52644789,52643343,52642045,52634815,52629035,52627370,52624941,52617538,52615456,52609955,52603732	Gene ID= ENSG00000163939.18 TPM= 3.98 Transcript Type= NA
chr3	52603537	52685940	52603537	52685940	-	transcript2978.chr3.nnic@PBRM1	transcript2978.chr3.nnic	protein_coding	52685749,52681695,52679574,52678500,52668498,52662133,52658199,52651742,52648344,52644704,52643248,52641954,52634602,52628894,52627273,52624897,52617262,52615351,52609313,52603537	52685940,52681820,52679726,52678597,52668645,52662276,52658315,52651810,52648442,52644789,52643343,52642045,52634815,52629035,52627370,52624941,52617538,52615456,52609955,52603732	Gene ID= ENSG00000163939.18 TPM= 4.51 Transcript Type= NA
chr3	52603537	52685940	52603537	52685940	-	transcript2983.chr3.nnic@PBRM1	transcript2983.chr3.nnic	protein_coding	52685749,52681695,52679574,52678500,52668498,52662133,52658199,52651742,52648344,52644704,52643248,52641954,52634602,52628894,52627273,52617262,52615351,52609313,52603537	52685940,52681820,52679726,52678597,52668645,52662276,52658315,52651810,52648442,52644789,52643343,52642045,52634815,52629035,52627370,52617538,52615456,52609955,52603732	Gene ID= ENSG00000163939.18 TPM= 8.23 Transcript Type= NA
chr3	52603537	52685916	52603537	52685916	-	transcript2986.chr3.nic@PBRM1	transcript2986.chr3.nic	protein_coding	52685749,52679574,52678500,52668498,52662133,52658199,52651742,52648344,52644704,52643248,52641954,52634602,52628894,52627273,52617262,52615351,52609313,52603537	52685916,52679726,52678597,52668645,52662276,52658315,52651810,52648442,52644789,52643343,52642045,52634815,52629035,52627370,52617538,52615456,52609955,52603732	Gene ID= ENSG00000163939.18 TPM= 6.64 Transcript Type= NA
chr3	52684814	52685913	52684814	52685913	-	transcript3025.chr3.nic@PBRM1	transcript3025.chr3.nic	protein_coding	52685749,52684814	52685913,52684914	Gene ID= ENSG00000163939.18 TPM= 2.12 Transcript Type= NA
chr3	52685647	52694459	52685647	52694459	+	transcript2992.chr3.nnic@GNL3	transcript2992.chr3.nnic	protein_coding	52685647,52686769,52687246,52687502,52688109,52689074,52690592,52690945,52691542,52692872,52693187,52693408,52693632,52694037,52694193	52686055,52686827,52687383,52687615,52688192,52689206,52690704,52691071,52691629,52693046,52693329,52693544,52693807,52694103,52694459	Gene ID= ENSG00000163938.16 TPM= 10.62 Transcript Type= NA
chr3	52692371	52693428	52692371	52693428	-	transcript3026.chr3.nnic@NA	transcript3026.chr3.nnic	NA	52692371	52693428	Gene ID= novel_gene_chr3_3027 TPM= 4.25 Transcript Type= NA
chr3	52694489	52705731	52694489	52705731	-	transcript3006.chr3.nnic@GLT8D1	transcript3006.chr3.nnic	protein_coding	52705447,52704724,52700445,52700262,52697721,52696542,52696234,52695928,52695421,52695190,52694489	52705731,52704952,52700496,52700360,52697934,52696659,52696318,52696040,52695587,52695229,52695035	Gene ID= ENSG00000016864.18 TPM= 2.12 Transcript Type= NA
chr3	52694489	52706034	52694489	52706034	-	transcript3009.chr3.nic@GLT8D1	transcript3009.chr3.nic	protein_coding	52705447,52704724,52700445,52700262,52697721,52696542,52696234,52695928,52695421,52695190,52694489	52706034,52704952,52700496,52700360,52697934,52696659,52696318,52696040,52695587,52695302,52695035	Gene ID= ENSG00000016864.18 TPM= 22.84 Transcript Type= NA
chr3	52694492	52705737	52694492	52705737	-	transcript3016.chr3.nic@GLT8D1	transcript3016.chr3.nic	protein_coding	52705447,52700445,52700262,52697721,52696542,52696234,52695928,52695421,52694492	52705737,52700496,52700360,52697934,52696659,52696318,52696040,52695587,52695302	Gene ID= ENSG00000016864.18 TPM= 2.12 Transcript Type= NA
chr3	52694488	52705786	52694488	52705786	-	ENST00000266014.10@GLT8D1	ENST00000266014.10	protein_coding	52705447,52700445,52700262,52697721,52696542,52696234,52695928,52695421,52695190,52694488	52705786,52700496,52700360,52697934,52696659,52696318,52696040,52695587,52695302,52695035	Gene ID= ENSG00000016864.18 TPM= 16.46 Transcript Type= protein_coding
chr3	52694503	52705781	52694503	52705781	-	ENST00000491606.5@GLT8D1	ENST00000491606.5	protein_coding	52705699,52700445,52700262,52697721,52696542,52696234,52695928,52695421,52695190,52694503	52705781,52700496,52700360,52697934,52696659,52696318,52696040,52695587,52695302,52695035	Gene ID= ENSG00000016864.18 TPM= 3.19 Transcript Type= protein_coding
chr3	52705841	52708179	52705841	52708179	+	ENST00000233025.11@SPCS1	ENST00000233025.11	protein_coding	52705841,52706644,52706793,52707687	52706282,52706703,52706879,52708179	Gene ID= ENSG00000114902.13 TPM= 132.77 Transcript Type= protein_coding
chr3	52708449	52770949	52708449	52770949	-	ENST00000233027.9@NEK4	ENST00000233027.9	protein_coding	52770654,52768338,52766178,52765887,52763470,52760795,52751932,52749692,52746734,52746061,52744239,52743352,52741411,52739429,52737586,52708449	52770949,52768604,52766375,52765994,52763624,52760936,52752336,52749829,52746904,52746210,52744305,52743461,52741499,52739634,52737719,52711869	Gene ID= ENSG00000114904.12 TPM= 18.06 Transcript Type= protein_coding
chr3	52847259	52897610	52847259	52897610	-	transcript3034.chr3.nnic@TMEM110-MUSTN1	transcript3034.chr3.nnic	protein_coding	52897291,52855396,52852603,52849792,52847259	52897610,52855444,52852698,52849913,52849214	Gene ID= ENSG00000248592.7 TPM= 2.12 Transcript Type= NA
chr3	52847257	52897610	52847257	52897610	-	transcript3033.chr3.nic@TMEM110	transcript3033.chr3.nic	protein_coding	52897291,52855396,52852603,52849792,52847257	52897610,52855444,52852698,52849913,52847551	Gene ID= ENSG00000213533.11 TPM= 7.44 Transcript Type= NA
chr3	52904611	53045266	52904611	53045266	-	transcript3037.chr3.nnic@SFMBT1	transcript3037.chr3.nnic	protein_coding	53044946,52969101,52954317,52943353,52934813,52932062,52930941,52930329,52928191,52926031,52921705,52920537,52918484,52916150,52913478,52912538,52911003,52907555,52907069,52906113,52904611	53045266,52969258,52954411,52943593,52934901,52932308,52931035,52930430,52928341,52926113,52921831,52920650,52918526,52916214,52913617,52912647,52911178,52907733,52907314,52906241,52905276	Gene ID= ENSG00000163935.13 TPM= 2.12 Transcript Type= NA
chr3	52903572	53046068	52903572	53046068	-	ENST00000394752.7@SFMBT1	ENST00000394752.7	protein_coding	53045816,52969101,52954317,52943353,52934813,52932062,52930941,52930329,52928191,52926031,52921705,52920537,52918484,52916150,52913478,52912538,52911003,52907555,52907069,52906113,52903572	53046068,52969258,52954411,52943593,52934901,52932308,52931035,52930430,52928341,52926113,52921831,52920650,52918526,52916214,52913617,52912647,52911178,52907733,52907314,52906241,52905276	Gene ID= ENSG00000163935.13 TPM= 1.06 Transcript Type= protein_coding
chr3	53088483	53130462	53088483	53130462	-	ENST00000296292.7@RFT1	ENST00000296292.7	protein_coding	53130338,53125909,53123724,53122374,53121699,53119884,53111830,53106819,53105673,53103953,53099381,53092369,53088483	53130462,53125994,53123840,53122563,53121800,53120021,53111908,53106869,53105803,53104097,53099486,53092618,53092070	Gene ID= ENSG00000163933.9 TPM= 2.12 Transcript Type= protein_coding
chr3	53091665	53130464	53091665	53130464	-	transcript3052.chr3.nnic@RFT1	transcript3052.chr3.nnic	protein_coding	53130338,53123724,53122374,53121699,53119884,53111830,53106819,53105673,53103953,53099381,53092369,53091665	53130464,53123840,53122563,53121800,53120021,53111908,53106869,53105803,53104097,53099486,53092618,53092070	Gene ID= ENSG00000163933.9 TPM= 2.12 Transcript Type= NA
chr3	53118533	53130465	53118533	53130465	-	transcript3054.chr3.nnic@RFT1	transcript3054.chr3.nnic	protein_coding	53130338,53125909,53123724,53122374,53121699,53119884,53118533	53130465,53125994,53123840,53122563,53121800,53120021,53118803	Gene ID= ENSG00000163933.9 TPM= 2.12 Transcript Type= NA
chr3	53161209	53192717	53161209	53192717	+	transcript3055.chr3.nnic@PRKCD	transcript3055.chr3.nnic	protein_coding	53161209,53165104,53173493,53178404,53179577,53181207,53181444,53181701,53183121,53183452,53184874,53185604,53185927,53186167,53186604,53187340,53188720,53189058,53189873,53192108	53161428,53165215,53173608,53178537,53179776,53181267,53181606,53181732,53183206,53183581,53184974,53185700,53186027,53186340,53186695,53187402,53188858,53189246,53190001,53192717	Gene ID= ENSG00000163932.13 TPM= 5.31 Transcript Type= NA
chr3	53161120	53192717	53161120	53192717	+	ENST00000394729.6@PRKCD	ENST00000394729.6	protein_coding	53161120,53178404,53179577,53181207,53181444,53181701,53183121,53183452,53184874,53185604,53185927,53186167,53186604,53187340,53188720,53189058,53189873,53192108	53161428,53178537,53179776,53181267,53181606,53181732,53183206,53183581,53184974,53185700,53186027,53186340,53186695,53187402,53188858,53189246,53190001,53192717	Gene ID= ENSG00000163932.13 TPM= 10.62 Transcript Type= protein_coding
chr3	53161199	53192554	53161199	53192554	+	ENST00000330452.7@PRKCD	ENST00000330452.7	protein_coding	53161199,53165104,53178404,53179577,53181207,53181444,53181701,53183121,53183452,53184874,53185604,53185927,53186167,53186604,53187340,53188720,53189058,53189873,53192108	53161428,53165215,53178537,53179776,53181267,53181606,53181732,53183206,53183581,53184974,53185700,53186027,53186340,53186695,53187402,53188858,53189246,53190001,53192554	Gene ID= ENSG00000163932.13 TPM= 3.19 Transcript Type= protein_coding
chr3	53225657	53255914	53225657	53255914	-	transcript3070.chr3.nic@TKT	transcript3070.chr3.nic	protein_coding	53255836,53243583,53242125,53241132,53240251,53234983,53233156,53231357,53230457,53229280,53229007,53228276,53228056,53226756,53225657	53255914,53243622,53242242,53241245,53240348,53235174,53233274,53231550,53230621,53229436,53229137,53228359,53228149,53226878,53225931	Gene ID= ENSG00000163931.15 TPM= 9.91 Transcript Type= NA
chr3	53225657	53240123	53225657	53240123	-	transcript3073.chr3.nic@TKT	transcript3073.chr3.nic	protein_coding	53237797,53234983,53233156,53231357,53230457,53229280,53229007,53228276,53228056,53226756,53225657	53240123,53235174,53233274,53231550,53230621,53229436,53229137,53228359,53228149,53226878,53225931	Gene ID= ENSG00000163931.15 TPM= 2.47 Transcript Type= NA
chr3	53225657	53256022	53225657	53256022	-	ENST00000423516.5@TKT	ENST00000423516.5	protein_coding	53255836,53242125,53241132,53240251,53237797,53234983,53233156,53231357,53230457,53229280,53229007,53228276,53228056,53226756,53225657	53256022,53242242,53241245,53240348,53237820,53235174,53233274,53231550,53230621,53229436,53229137,53228359,53228149,53226878,53225931	Gene ID= ENSG00000163931.15 TPM= 13.1 Transcript Type= protein_coding
chr3	53253323	53256022	53253323	53256022	-	transcript3074.chr3.nnic@NA	transcript3074.chr3.nnic	NA	53253323	53256022	Gene ID= novel_gene_chr3_3075 TPM= 2.12 Transcript Type= NA
chr3	53287370	53347525	53287370	53347525	-	ENST00000294241.10@DCP1A	ENST00000294241.10	protein_coding	53347383,53344902,53342144,53319407,53312241,53292069,53290791,53288065,53287370	53347525,53344942,53342271,53319473,53312379,53292827,53290856,53288283,53287660	Gene ID= ENSG00000272886.5 TPM= 2.12 Transcript Type= protein_coding
chr3	53816841	53846421	53816841	53846421	-	transcript3095.chr3.nnic@CHDH	transcript3095.chr3.nnic	protein_coding	53845822,53840929,53823306,53822491,53821647,53820474,53819532,53818938,53816841	53846421,53840999,53824067,53822642,53821776,53820608,53819674,53819040,53818195	Gene ID= ENSG00000016391.10 TPM= 2.12 Transcript Type= NA
chr3	53858994	53861576	53858994	53861576	-	ENST00000607783.1@AC012467.2	ENST00000607783.1	antisense_RNA	53858994	53861576	Gene ID= ENSG00000271976.1 TPM= 1.06 Transcript Type= antisense_RNA
chr3	53863822	53882126	53863822	53882126	-	transcript3082.chr3.nnic@ACTR8	transcript3082.chr3.nnic	protein_coding	53881979,53879939,53878357,53877647,53877214,53876620,53875948,53874211,53873032,53872384,53871232,53869982,53863822	53882126,53880109,53878467,53877751,53877387,53876713,53876080,53874364,53873127,53872524,53871496,53870145,53865019	Gene ID= ENSG00000113812.13 TPM= 3.19 Transcript Type= NA
chr3	53867066	53882202	53867066	53882202	-	ENST00000335754.7@ACTR8	ENST00000335754.7	protein_coding	53881979,53879939,53878357,53877647,53877214,53876620,53875948,53874211,53873032,53872384,53871232,53869982,53867066	53882202,53880109,53878467,53877751,53877387,53876713,53876080,53874364,53873127,53872524,53871496,53870145,53868862	Gene ID= ENSG00000113812.13 TPM= 3.19 Transcript Type= protein_coding
chr3	53868586	53882180	53868586	53882180	-	transcript3092.chr3.nic@ACTR8	transcript3092.chr3.nic	protein_coding	53881979,53879939,53878357,53877647,53876620,53875948,53874211,53873032,53872384,53871232,53869982,53868586	53882180,53880109,53878467,53877751,53877387,53876080,53874364,53873127,53872524,53871496,53870145,53868862	Gene ID= ENSG00000113812.13 TPM= 2.12 Transcript Type= NA
chr3	53885200	53891962	53885200	53891962	-	ENST00000541726.5@SELENOK	ENST00000541726.5	protein_coding	53891770,53888393,53886851,53885834,53885826,53885200	53891962,53888483,53886934,53885912,53885830,53885561	Gene ID= ENSG00000113811.10 TPM= 147.64 Transcript Type= protein_coding
chr3	53884410	53891988	53884410	53891988	-	ENST00000495461.5@SELENOK	ENST00000495461.5	protein_coding	53891770,53888393,53886851,53885826,53884410	53891988,53888483,53886934,53885912,53885561	Gene ID= ENSG00000113811.10 TPM= 41.42 Transcript Type= protein_coding
chr3	53885301	53891865	53885301	53891865	-	ENST00000488746.1@SELENOK	ENST00000488746.1	protein_coding	53891770,53888393,53886851,53885826,53885301	53891865,53888483,53886934,53885904,53885561	Gene ID= ENSG00000113811.10 TPM= 26.55 Transcript Type= nonsense_mediated_decay
chr3	54122552	54879184	54122552	54879184	+	transcript3110.chr3.nic@CACNA2D3	transcript3110.chr3.nic	protein_coding	54122552,54123513,54320442,54386715,54503492,54562800,54569795,54569954,54581803,54627787,54642128,54752599,54764218,54816853,54837159,54838568,54846393,54871539,54879018	54122835,54123594,54320558,54386774,54503654,54562931,54569855,54570104,54581877,54627876,54642241,54752677,54764351,54816870,54837230,54838648,54846467,54871622,54879184	Gene ID= ENSG00000157445.14 TPM= 33.99 Transcript Type= NA
chr3	54849773	54854257	54849773	54854257	+	transcript3114.chr3.nnic@NA	transcript3114.chr3.nnic	NA	54849773	54854257	Gene ID= novel_gene_chr3_3115 TPM= 2.12 Transcript Type= NA
chr3	56557173	56621797	56557173	56621797	+	ENST00000394672.7@CCDC66	ENST00000394672.7	protein_coding	56557173,56558846,56559569,56563684,56566594,56566950,56571181,56592970,56593491,56593944,56613589,56615128,56615922,56617112,56618172,56619271,56619777,56621532	56557253,56558910,56559594,56564125,56566759,56567053,56571302,56593101,56593741,56594028,56613750,56615272,56616053,56617605,56618212,56619527,56619901,56621797	Gene ID= ENSG00000180376.16 TPM= 3.19 Transcript Type= protein_coding
chr3	56728987	56916471	56728987	56916471	-	ENST00000496106.5@ARHGEF3	ENST00000496106.5	protein_coding	56916309,56882292,56773709,56754981,56753504,56751300,56751056,56745205,56737185,56732238,56728987	56916471,56882354,56773816,56755151,56753566,56751396,56751132,56745462,56737355,56732424,56729622	Gene ID= ENSG00000163947.11 TPM= 2.12 Transcript Type= protein_coding
chr3	56727418	56801967	56727418	56801967	-	ENST00000296315.7@ARHGEF3	ENST00000296315.7	protein_coding	56801703,56773709,56754981,56753504,56751300,56751056,56745205,56737185,56732238,56727418	56801967,56773816,56755151,56753566,56751396,56751132,56745462,56737355,56732424,56729622	Gene ID= ENSG00000163947.11 TPM= 10.62 Transcript Type= protein_coding
chr3	57227708	57288084	57227708	57288084	+	transcript3134.chr3.nnic@APPL1	transcript3134.chr3.nnic	protein_coding	57227708,57235566,57237492,57238045,57240465,57242101,57242856,57246076,57247395,57248193,57249360,57252269,57253682,57256957,57257246,57259028,57259845,57260117,57260628,57267742,57268398,57269541,57287597	57227937,57235664,57237551,57238116,57240552,57242142,57242914,57246222,57247477,57248351,57249548,57252311,57253738,57257051,57257428,57259080,57260019,57260153,57260774,57267792,57268487,57269700,57288084	Gene ID= ENSG00000157500.10 TPM= 3.54 Transcript Type= NA
chr3	57252626	57271371	57252626	57271371	+	transcript3155.chr3.nnic@APPL1	transcript3155.chr3.nnic	protein_coding	57252626,57253682,57256957,57257246,57259028,57259845,57260117,57260628,57267742,57268398,57269541	57252824,57253738,57257051,57257428,57259080,57260019,57260153,57260774,57267792,57268487,57271371	Gene ID= ENSG00000157500.10 TPM= 3.72 Transcript Type= NA
chr3	57252643	57272607	57252643	57272607	+	transcript3158.chr3.nnic@APPL1	transcript3158.chr3.nnic	protein_coding	57252643,57256957,57257246,57259028,57259845,57260117,57260628,57267742,57268398,57269541	57252824,57257051,57257428,57259080,57260019,57260153,57260774,57267792,57268487,57272607	Gene ID= ENSG00000157500.10 TPM= 2.12 Transcript Type= NA
chr3	57252626	57268490	57252626	57268490	+	transcript3161.chr3.nnic@APPL1	transcript3161.chr3.nnic	protein_coding	57252626,57253682,57256957,57257246,57259028,57259845,57260117,57260628,57267742	57252824,57253738,57257051,57257428,57259080,57260019,57260153,57260774,57268490	Gene ID= ENSG00000157500.10 TPM= 2.66 Transcript Type= NA
chr3	57227737	57273468	57227737	57273468	+	ENST00000288266.7@APPL1	ENST00000288266.7	protein_coding	57227737,57235566,57237492,57238045,57240465,57242101,57242856,57246076,57247395,57248193,57249360,57252269,57253682,57256957,57257246,57259028,57259845,57260117,57260628,57267742,57268398,57269541	57227937,57235664,57237551,57238116,57240552,57242142,57242914,57246222,57247477,57248351,57249548,57252311,57253738,57257051,57257428,57259080,57260019,57260153,57260774,57267792,57268487,57273468	Gene ID= ENSG00000157500.10 TPM= 6.72 Transcript Type= protein_coding
chr3	57276210	57292735	57276210	57292735	-	transcript3160.chr3.nnic@ASB14	transcript3160.chr3.nnic	protein_coding	57292633,57291912,57289064,57288155,57287901,57283194,57280302,57278377,57277767,57276210	57292735,57292104,57289123,57288286,57288059,57283439,57280473,57278920,57277920,57276728	Gene ID= ENSG00000239388.8 TPM= 4.25 Transcript Type= NA
chr3	57556254	57654975	57556254	57654975	+	transcript3182.chr3.nnic@PDE12	transcript3182.chr3.nnic	protein_coding	57556254,57559310,57654624	57557687,57559388,57654975	Gene ID= ENSG00000174840.8 TPM= 4.25 Transcript Type= NA
chr3	57571363	57597408	57571363	57597408	-	ENST00000303436.10@ARF4	ENST00000303436.10	protein_coding	57597074,57584384,57583898,57577316,57575548,57571363	57597408,57584464,57584007,57577387,57575673,57572298	Gene ID= ENSG00000168374.10 TPM= 73.29 Transcript Type= protein_coding
chr3	57597661	57600920	57597661	57600920	+	transcript3183.chr3.nnic@ARF4-AS1	transcript3183.chr3.nnic	antisense_RNA	57597661,57600059,57600743	57597780,57600169,57600920	Gene ID= ENSG00000272146.5 TPM= 2.12 Transcript Type= NA
chr3	57597715	57600920	57597715	57600920	+	ENST00000606192.5@ARF4-AS1	ENST00000606192.5	antisense_RNA	57597715,57600059,57600743	57597752,57600169,57600920	Gene ID= ENSG00000272146.5 TPM= 1.06 Transcript Type= antisense_RNA
chr3	57625457	57693096	57625457	57693096	-	transcript3168.chr3.nnic@DENND6A	transcript3168.chr3.nnic	protein_coding	57692782,57672400,57672256,57666123,57663636,57661446,57660760,57659118,57657680,57646316,57645661,57641653,57634704,57634558,57633265,57630925,57630715,57630421,57628811,57627940,57625457	57693096,57672438,57672298,57666235,57663716,57661551,57660839,57659180,57657735,57646438,57645756,57641747,57634769,57634622,57633354,57630978,57630824,57630523,57628885,57628345,57626449	Gene ID= ENSG00000174839.12 TPM= 4.25 Transcript Type= NA
chr3	57625457	57693089	57625457	57693089	-	ENST00000311128.9@DENND6A	ENST00000311128.9	protein_coding	57692782,57672400,57672256,57666123,57663636,57661446,57660760,57659118,57657680,57646316,57645661,57641653,57634704,57634558,57633265,57630925,57630715,57630421,57628811,57625457	57693089,57672438,57672298,57666235,57663716,57661551,57660839,57659180,57657735,57646438,57645756,57641747,57634769,57634622,57633354,57630978,57630824,57630523,57628885,57628345	Gene ID= ENSG00000174839.12 TPM= 4.25 Transcript Type= protein_coding
chr3	57889914	57930003	57889914	57930003	+	transcript3217.chr3.nic@SLMAP	transcript3217.chr3.nic	protein_coding	57889914,57896511,57896873,57909076,57912381,57913158,57916906,57922889,57925845,57927296	57890100,57896591,57896932,57909150,57912701,57913275,57917077,57923023,57925934,57930003	Gene ID= ENSG00000163681.14 TPM= 28.05 Transcript Type= NA
chr3	57889850	57929999	57889850	57929999	+	transcript3224.chr3.nic@SLMAP	transcript3224.chr3.nic	protein_coding	57889850,57896511,57896873,57909076,57912381,57913158,57916906,57922889,57927296	57890100,57896591,57896932,57909150,57912701,57913275,57917077,57923023,57929999	Gene ID= ENSG00000163681.14 TPM= 32.09 Transcript Type= NA
chr3	57889978	57913603	57889978	57913603	+	transcript3233.chr3.nic@SLMAP	transcript3233.chr3.nic	protein_coding	57889978,57896511,57896873,57909076,57912381,57913158	57890100,57896591,57896932,57909150,57912701,57913603	Gene ID= ENSG00000163681.14 TPM= 20.47 Transcript Type= NA
chr3	57890041	57929126	57890041	57929126	+	ENST00000417128.5@SLMAP	ENST00000417128.5	protein_coding	57890041,57896511,57896873,57907884,57909076,57912381,57913158,57916906,57922889,57925845,57927296	57890100,57896591,57896932,57908006,57909150,57912701,57913275,57917077,57923023,57925934,57929126	Gene ID= ENSG00000163681.14 TPM= 41.42 Transcript Type= protein_coding
chr3	57890057	57918480	57890057	57918480	+	ENST00000438794.5@SLMAP	ENST00000438794.5	protein_coding	57890057,57896511,57896873,57909076,57912381,57913158,57916906	57890100,57896591,57896932,57909150,57912701,57913275,57918480	Gene ID= ENSG00000163681.14 TPM= 9.56 Transcript Type= protein_coding
chr3	57891579	57893076	57891579	57893076	-	transcript3238.chr3.nnic@NA	transcript3238.chr3.nnic	NA	57891579	57893076	Gene ID= novel_gene_chr3_3239 TPM= 6.37 Transcript Type= NA
chr3	58008400	58172251	58008400	58172251	+	ENST00000429972.6@FLNB	ENST00000429972.6	protein_coding	58008400,58077046,58078717,58081629,58094836,58096141,58097815,58098711,58102203,58103959,58105080,58106680,58108458,58109179,58109576,58110010,58111791,58112149,58118872,58121241,58123093,58124332,58125581,58126602,58130741,58132808,58134616,58135979,58138282,58141858,58142650,58143473,58145921,58146820,58148206,58148649,58149850,58150105,58153375,58154791,58155960,58159554,58163154,58168440,58169590,58170575	58008856,58077294,58078814,58081776,58094954,58096218,58097977,58098908,58102340,58104085,58105216,58106873,58108571,58109322,58109699,58110170,58111881,58112318,58118989,58121503,58123690,58124505,58125743,58126762,58130908,58132931,58134772,58136168,58138529,58141896,58142752,58143613,58146049,58146993,58148364,58148852,58150002,58150227,58153641,58154928,58156075,58159686,58163330,58168658,58169793,58172251	Gene ID= ENSG00000136068.14 TPM= 15.4 Transcript Type= protein_coding
chr3	58008400	58172251	58008400	58172251	+	ENST00000295956.8@FLNB	ENST00000295956.8	protein_coding	58008400,58077046,58078717,58081629,58094836,58096141,58097815,58098711,58102203,58103959,58105080,58106680,58108458,58109179,58109576,58110010,58111791,58112149,58118872,58121241,58123093,58124332,58125581,58126602,58130741,58132808,58134616,58135979,58138282,58141858,58142650,58143473,58145921,58146820,58148206,58148649,58149850,58150105,58153375,58154791,58155960,58159554,58163154,58168440,58169590,58170575	58008856,58077294,58078814,58081776,58094954,58096218,58097977,58098908,58102340,58104085,58105216,58106873,58108571,58109322,58109699,58110170,58111881,58112318,58118989,58121503,58123690,58124505,58125743,58126762,58130908,58132931,58134772,58136168,58138529,58141929,58142752,58143613,58146049,58146993,58148364,58148852,58150002,58150227,58153641,58154928,58156075,58159686,58163330,58168658,58169793,58172251	Gene ID= ENSG00000136068.14 TPM= 17.53 Transcript Type= protein_coding
chr3	58163254	58166829	58163254	58166829	+	transcript3253.chr3.nnic@NA	transcript3253.chr3.nnic	NA	58163254	58166829	Gene ID= novel_gene_chr3_3254 TPM= 3.19 Transcript Type= NA
chr3	58237506	58294732	58237506	58294732	+	ENST00000478253.5@ABHD6	ENST00000478253.5	protein_coding	58237506,58249878,58256562,58267189,58269321,58270932,58274658,58285085,58285353,58293589	58237916,58249942,58256705,58267345,58269434,58271064,58274815,58285139,58285453,58294732	Gene ID= ENSG00000163686.14 TPM= 4.25 Transcript Type= protein_coding
chr3	58237532	58294734	58237532	58294734	+	ENST00000295962.8@ABHD6	ENST00000295962.8	protein_coding	58237532,58256562,58267189,58269321,58270932,58274658,58285085,58285353,58293589	58237916,58256705,58267345,58269434,58271064,58274815,58285139,58285453,58294734	Gene ID= ENSG00000163686.14 TPM= 4.25 Transcript Type= protein_coding
chr3	58306262	58324695	58306262	58324695	+	ENST00000445193.7@RPP14	ENST00000445193.7	protein_coding	58306262,58310309,58310507,58316515,58316915,58317440	58306651,58310406,58310591,58316591,58316993,58324695	Gene ID= ENSG00000163684.11 TPM= 2.12 Transcript Type= protein_coding
chr3	58332880	58425151	58332880	58425151	+	ENST00000302779.9@PXK	ENST00000302779.9	protein_coding	58332880,58365874,58369431,58382514,58390582,58391147,58391773,58394998,58395658,58397039,58397605,58399299,58403862,58408924,58409532,58410090,58424752	58333090,58365924,58369478,58382700,58390659,58391220,58391847,58395102,58395759,58397200,58397722,58399377,58403910,58409001,58409618,58410159,58425151	Gene ID= ENSG00000168297.15 TPM= 1.06 Transcript Type= protein_coding
chr3	58427630	58433857	58427630	58433857	-	ENST00000383714.8@PDHB	ENST00000383714.8	protein_coding	58433768,58431877,58431731,58431593,58430657,58430128,58429708,58428473,58427630	58433857,58431984,58431793,58431628,58430942,58430238,58429799,58428614,58428179	Gene ID= ENSG00000168291.12 TPM= 18.85 Transcript Type= protein_coding
chr3	58427630	58433852	58427630	58433852	-	ENST00000302746.10@PDHB	ENST00000302746.10	protein_coding	58433768,58433631,58431877,58431731,58431593,58430657,58430128,58429708,58428473,58427630	58433852,58433684,58431984,58431793,58431628,58430942,58430238,58429799,58428614,58428179	Gene ID= ENSG00000168291.12 TPM= 356.62 Transcript Type= protein_coding
chr3	58427651	58433820	58427651	58433820	-	ENST00000469364.5@PDHB	ENST00000469364.5	protein_coding	58433768,58433631,58431877,58431731,58431593,58430657,58430128,58429708,58428473,58427651	58433820,58433684,58431984,58431793,58431628,58430942,58430238,58429941,58428614,58428179	Gene ID= ENSG00000168291.12 TPM= 2.39 Transcript Type= nonsense_mediated_decay
chr3	58427692	58433839	58427692	58433839	-	ENST00000461692.5@PDHB	ENST00000461692.5	protein_coding	58433631,58431877,58431731,58431593,58430657,58430128,58429708,58428473,58427692	58433839,58431984,58431793,58431628,58430942,58430238,58429799,58428614,58428179	Gene ID= ENSG00000168291.12 TPM= 4.51 Transcript Type= retained_intron
chr3	58492114	58502352	58492114	58502352	+	ENST00000404589.7@KCTD6	ENST00000404589.7	protein_coding	58492114,58498713,58500946	58492169,58498782,58502352	Gene ID= ENSG00000168301.12 TPM= 14.87 Transcript Type= protein_coding
chr3	58565461	58627610	58565461	58627610	-	ENST00000474531.5@FAM107A	ENST00000474531.5	protein_coding	58626971,58589206,58569691,58567208,58565461	58627610,58589269,58569865,58567364,58566695	Gene ID= ENSG00000168309.16 TPM= 4.25 Transcript Type= protein_coding
chr3	58564117	58577764	58564117	58577764	-	ENST00000394481.5@FAM107A	ENST00000394481.5	protein_coding	58577309,58570326,58569691,58567208,58564117	58577764,58570423,58569865,58567364,58566695	Gene ID= ENSG00000168309.16 TPM= 18.06 Transcript Type= protein_coding
chr3	58564117	58577764	58564117	58577764	-	ENST00000360997.6@FAM107A	ENST00000360997.6	protein_coding	58577309,58569691,58567208,58564117	58577764,58569865,58567364,58566695	Gene ID= ENSG00000168309.16 TPM= 20.18 Transcript Type= protein_coding
chr3	59749310	61251413	59749310	61251413	-	ENST00000476844.5@FHIT	ENST00000476844.5	protein_coding	61251301,61200617,61042047,60821919,60536860,60014007,60011371,59922346,59752221,59749310	61251413,61200665,61042099,60822011,60536979,60014152,60011400,59922414,59752321,59749568	Gene ID= ENSG00000189283.9 TPM= 8.5 Transcript Type= protein_coding
chr3	59749310	61251450	59749310	61251450	-	ENST00000492590.5@FHIT	ENST00000492590.5	protein_coding	61251301,61200617,61042047,60821919,60536860,60014007,60011371,59922346,59752221,59749310	61251450,61200665,61042099,60822011,60536979,60014152,60011400,59922414,59752321,59749579	Gene ID= ENSG00000189283.9 TPM= 4.25 Transcript Type= protein_coding
chr3	59970840	59973488	59970840	59973488	-	transcript3325.chr3.nnic@NA	transcript3325.chr3.nnic	NA	59970840	59973488	Gene ID= novel_gene_chr3_3326 TPM= 2.12 Transcript Type= NA
chr3	61251586	61252858	61251586	61252858	+	transcript3327.chr3.nnic@NA	transcript3327.chr3.nnic	NA	61251586	61252858	Gene ID= novel_gene_chr3_3328 TPM= 2.12 Transcript Type= NA
chr3	61614420	61616759	61614420	61616759	-	transcript3333.chr3.nnic@NA	transcript3333.chr3.nnic	NA	61614420	61616759	Gene ID= novel_gene_chr3_3334 TPM= 5.31 Transcript Type= NA
chr3	61672785	61673172	61672785	61673172	+	transcript3331.chr3.nnic@NA	transcript3331.chr3.nnic	NA	61672785	61673172	Gene ID= novel_gene_chr3_3332 TPM= 2.12 Transcript Type= NA
chr3	61753587	61755163	61753587	61755163	-	transcript3335.chr3.nnic@NA	transcript3335.chr3.nnic	NA	61753587	61755163	Gene ID= novel_gene_chr3_3336 TPM= 5.31 Transcript Type= NA
chr3	61781892	61787607	61781892	61787607	-	transcript3337.chr3.nnic@NA	transcript3337.chr3.nnic	NA	61781892	61787607	Gene ID= novel_gene_chr3_3338 TPM= 4.25 Transcript Type= NA
chr3	61798621	61799743	61798621	61799743	-	transcript3340.chr3.nnic@NA	transcript3340.chr3.nnic	NA	61798621	61799743	Gene ID= novel_gene_chr3_3341 TPM= 3.19 Transcript Type= NA
chr3	61843966	61846736	61843966	61846736	-	transcript3342.chr3.nnic@NA	transcript3342.chr3.nnic	NA	61843966	61846736	Gene ID= novel_gene_chr3_3343 TPM= 2.12 Transcript Type= NA
chr3	61989624	62294296	61989624	62294296	+	transcript3345.chr3.nic@PTPRG	transcript3345.chr3.nic	protein_coding	61989624,62003349,62078163,62132602,62157067,62167971,62191469,62195062,62201505,62203173,62218851,62243807,62255124,62262798,62267410,62267685,62269035,62271383,62272946,62273698,62275873,62276972,62277551,62281563,62282727,62292421,62293161	61989804,62003497,62078258,62132668,62157224,62168163,62191653,62195170,62201554,62203950,62218983,62243898,62255215,62262894,62267492,62267819,62269169,62271555,62273081,62273844,62275966,62277048,62277679,62281709,62282869,62292556,62294296	Gene ID= ENSG00000144724.19 TPM= 4.25 Transcript Type= NA
chr3	62281539	62297613	62281539	62297613	+	transcript3347.chr3.nic@PTPRG	transcript3347.chr3.nic	protein_coding	62281539,62282727,62292421,62293161	62281709,62282869,62292556,62297613	Gene ID= ENSG00000144724.19 TPM= 4.25 Transcript Type= NA
chr3	62281540	62284885	62281540	62284885	-	transcript3349.chr3.nnic@NA	transcript3349.chr3.nnic	NA	62281540	62284885	Gene ID= novel_gene_chr3_3350 TPM= 2.12 Transcript Type= NA
chr3	62319721	62333646	62319721	62333646	+	ENST00000542214.2@C3orf14	ENST00000542214.2	protein_coding	62319721,62320460,62321930,62331325,62333255	62319832,62320524,62322053,62331399,62333646	Gene ID= ENSG00000114405.10 TPM= 1.06 Transcript Type= protein_coding
chr3	62398346	62875389	62398346	62875389	-	ENST00000612439.4@CADPS	ENST00000612439.4	protein_coding	62874589,62765871,62753441,62662314,62650847,62645722,62592637,62585185,62570872,62557405,62549903,62536445,62532871,62530654,62518149,62516580,62516059,62499162,62492290,62491339,62478261,62474173,62466339,62465367,62445765,62438104,62403081,62398346	62875389,62765984,62753773,62662394,62651080,62645843,62592748,62585324,62570938,62557513,62550115,62536581,62533058,62530812,62518250,62516643,62516182,62499268,62492446,62491480,62478416,62474320,62466413,62465450,62445797,62438211,62403185,62399585	Gene ID= ENSG00000163618.17 TPM= 6.37 Transcript Type= protein_coding
chr3	62637747	62642121	62637747	62642121	+	transcript3363.chr3.nnic@NA	transcript3363.chr3.nnic	NA	62637747	62642121	Gene ID= novel_gene_chr3_3364 TPM= 2.12 Transcript Type= NA
chr3	62873756	62875912	62873756	62875912	+	transcript3365.chr3.nnic@NA	transcript3365.chr3.nnic	NA	62873756	62875912	Gene ID= novel_gene_chr3_3366 TPM= 2.12 Transcript Type= NA
chr3	63146354	63148800	63146354	63148800	+	transcript3370.chr3.nnic@NA	transcript3370.chr3.nnic	NA	63146354,63146624,63148680	63146459,63146729,63148800	Gene ID= novel_gene_chr3_3371 TPM= 3.19 Transcript Type= NA
chr3	63838387	63864043	63838387	63864043	-	transcript3387.chr3.nic@THOC7	transcript3387.chr3.nic	protein_coding	63863772,63839656,63838387	63864043,63839773,63838499	Gene ID= ENSG00000163634.11 TPM= 5.31 Transcript Type= NA
chr3	63833870	63863903	63833870	63863903	-	ENST00000295899.9@THOC7	ENST00000295899.9	protein_coding	63863772,63839656,63838372,63837976,63836301,63835324,63835154,63833870	63863903,63839773,63838499,63838062,63836358,63835390,63835223,63834199	Gene ID= ENSG00000163634.11 TPM= 78.6 Transcript Type= protein_coding
chr3	63833871	63863868	63833871	63863868	-	ENST00000469584.5@THOC7	ENST00000469584.5	protein_coding	63863772,63838372,63837976,63836301,63835324,63835154,63833871	63863868,63838499,63838062,63836358,63835390,63835223,63834199	Gene ID= ENSG00000163634.11 TPM= 6.37 Transcript Type= protein_coding
chr3	64000287	64002016	64000287	64002016	+	transcript3397.chr3.nnic@NA	transcript3397.chr3.nnic	NA	64000287	64002016	Gene ID= novel_gene_chr3_3398 TPM= 5.31 Transcript Type= NA
chr3	64010555	64023472	64010555	64023472	-	ENST00000492933.5@PSMD6	ENST00000492933.5	protein_coding	64023275,64022643,64022318,64019296,64018818,64018599,64013439,64010878,64010555	64023472,64022801,64022523,64019441,64019037,64018707,64013607,64010955,64010764	Gene ID= ENSG00000163636.10 TPM= 3.9 Transcript Type= protein_coding
chr3	64010549	64023560	64010549	64023560	-	ENST00000295901.8@PSMD6	ENST00000295901.8	protein_coding	64023275,64022318,64019296,64018818,64018599,64013439,64010878,64010549	64023560,64022523,64019441,64019037,64018707,64013607,64010955,64010764	Gene ID= ENSG00000163636.10 TPM= 179.15 Transcript Type= protein_coding
chr3	64010555	64023437	64010555	64023437	-	ENST00000476464.5@PSMD6	ENST00000476464.5	protein_coding	64022318,64019296,64018818,64018599,64013439,64010878,64010555	64023437,64019441,64019037,64018707,64013607,64010955,64010764	Gene ID= ENSG00000163636.10 TPM= 1.77 Transcript Type= retained_intron
chr3	64095261	64098491	64095261	64098491	+	transcript3399.chr3.nnic@NA	transcript3399.chr3.nnic	NA	64095261	64098491	Gene ID= novel_gene_chr3_3400 TPM= 90.28 Transcript Type= NA
chr3	64515654	64688000	64515654	64688000	-	ENST00000498707.5@ADAMTS9	ENST00000498707.5	protein_coding	64687543,64686568,64681201,64658502,64655792,64655576,64654572,64654353,64651017,64649637,64647940,64641848,64633698,64633472,64631808,64631455,64622420,64622198,64621114,64615960,64615321,64613345,64606960,64604227,64603922,64601944,64596830,64594258,64568368,64561578,64550892,64546758,64541838,64541526,64541320,64541095,64539203,64533166,64522166,64515654	64688000,64686968,64681363,64658791,64655875,64655691,64654612,64654458,64651163,64649778,64648044,64641993,64633879,64633608,64631925,64631550,64622586,64622327,64621240,64616170,64615485,64613509,64607079,64604331,64604089,64602213,64596991,64594434,64568535,64561751,64551062,64546952,64541970,64541620,64541414,64541228,64539294,64533270,64522260,64517121	Gene ID= ENSG00000163638.13 TPM= 16.99 Transcript Type= protein_coding
chr3	64530841	64531483	64530841	64531483	+	transcript3402.chr3.nnic@NA	transcript3402.chr3.nnic	NA	64530841	64531483	Gene ID= novel_gene_chr3_3403 TPM= 5.31 Transcript Type= NA
chr3	64649942	64687990	64649942	64687990	-	ENST00000459780.1@ADAMTS9	ENST00000459780.1	protein_coding	64687543,64686568,64681201,64658502,64655792,64655576,64654572,64654353,64649942	64687990,64686968,64681363,64658791,64655875,64655691,64654612,64654458,64651163	Gene ID= ENSG00000163638.13 TPM= 1.06 Transcript Type= protein_coding
chr3	65354884	65622090	65354884	65622090	-	transcript3412.chr3.nnic@MAGI1	transcript3412.chr3.nnic	protein_coding	65621972,65493512,65478592,65470283,65453258,65448022,65442792,65439879,65437155,65430699,65429520,65401439,65391142,65383532,65381877,65379261,65375745,65364853,65364665,65363465,65361199,65359064,65354884	65622090,65493631,65478798,65470484,65453340,65448057,65442849,65440012,65437247,65430881,65430140,65401470,65391358,65383623,65382069,65379554,65375912,65364946,65364725,65363608,65361337,65359152,65357132	Gene ID= ENSG00000151276.23 TPM= 10.62 Transcript Type= NA
chr3	65354884	65622090	65354884	65622090	-	transcript3418.chr3.nic@MAGI1	transcript3418.chr3.nic	protein_coding	65621972,65493512,65478592,65470283,65453258,65448022,65442792,65439879,65437155,65430699,65429520,65401439,65391142,65383532,65381877,65379261,65364853,65364665,65363465,65361199,65359064,65354884	65622090,65493631,65478798,65470484,65453340,65448057,65442849,65440012,65437247,65430881,65430140,65401470,65391358,65383623,65382069,65379554,65364946,65364725,65363608,65361337,65359152,65357132	Gene ID= ENSG00000151276.23 TPM= 6.37 Transcript Type= NA
chr3	65452582	66038834	65452582	66038834	-	ENST00000464060.5@MAGI1	ENST00000464060.5	protein_coding	66037996,65621972,65493512,65478592,65470283,65452582	66038834,65622088,65493631,65478798,65470487,65453340	Gene ID= ENSG00000151276.23 TPM= 1.06 Transcript Type= retained_intron
chr3	65393524	65395655	65393524	65395655	+	transcript3431.chr3.nnic@NA	transcript3431.chr3.nnic	NA	65393524	65395655	Gene ID= novel_gene_chr3_3432 TPM= 5.31 Transcript Type= NA
chr3	65397531	65399659	65397531	65399659	-	transcript3433.chr3.nnic@NA	transcript3433.chr3.nnic	NA	65397531	65399659	Gene ID= novel_gene_chr3_3434 TPM= 2.12 Transcript Type= NA
chr3	65729129	65731503	65729129	65731503	+	transcript3435.chr3.nnic@NA	transcript3435.chr3.nnic	NA	65729129	65731503	Gene ID= novel_gene_chr3_3436 TPM= 8.5 Transcript Type= NA
chr3	65775709	65778442	65775709	65778442	+	transcript3437.chr3.nnic@NA	transcript3437.chr3.nnic	NA	65775709	65778442	Gene ID= novel_gene_chr3_3438 TPM= 6.37 Transcript Type= NA
chr3	65816940	65819895	65816940	65819895	+	transcript3439.chr3.nnic@NA	transcript3439.chr3.nnic	NA	65816940	65819895	Gene ID= novel_gene_chr3_3440 TPM= 13.81 Transcript Type= NA
chr3	65921485	65923384	65921485	65923384	-	transcript3441.chr3.nnic@NA	transcript3441.chr3.nnic	NA	65921485	65923384	Gene ID= novel_gene_chr3_3442 TPM= 2.12 Transcript Type= NA
chr3	65934770	65936935	65934770	65936935	-	transcript3445.chr3.nnic@NA	transcript3445.chr3.nnic	NA	65934770	65936935	Gene ID= novel_gene_chr3_3446 TPM= 2.12 Transcript Type= NA
chr3	65954365	65957368	65954365	65957368	+	transcript3443.chr3.nnic@NA	transcript3443.chr3.nnic	NA	65954365	65957368	Gene ID= novel_gene_chr3_3444 TPM= 29.74 Transcript Type= NA
chr3	65977571	65980577	65977571	65980577	+	transcript3449.chr3.nnic@NA	transcript3449.chr3.nnic	NA	65977571	65980577	Gene ID= novel_gene_chr3_3450 TPM= 2.12 Transcript Type= NA
chr3	65982916	65984626	65982916	65984626	-	transcript3451.chr3.nnic@NA	transcript3451.chr3.nnic	NA	65982916	65984626	Gene ID= novel_gene_chr3_3452 TPM= 3.19 Transcript Type= NA
chr3	65987065	65991321	65987065	65991321	+	transcript3447.chr3.nnic@NA	transcript3447.chr3.nnic	NA	65987065	65991321	Gene ID= novel_gene_chr3_3448 TPM= 5.31 Transcript Type= NA
chr3	66023106	66024336	66023106	66024336	+	transcript3453.chr3.nnic@NA	transcript3453.chr3.nnic	NA	66023106	66024336	Gene ID= novel_gene_chr3_3454 TPM= 9.56 Transcript Type= NA
chr3	66030553	66032753	66030553	66032753	+	transcript3455.chr3.nnic@NA	transcript3455.chr3.nnic	NA	66030553	66032753	Gene ID= novel_gene_chr3_3456 TPM= 8.5 Transcript Type= NA
chr3	66038645	66039307	66038645	66039307	-	transcript3457.chr3.nnic@NA	transcript3457.chr3.nnic	NA	66038645	66039307	Gene ID= novel_gene_chr3_3458 TPM= 10.62 Transcript Type= NA
chr3	66175208	66175430	66175208	66175430	-	transcript3459.chr3.nnic@NA	transcript3459.chr3.nnic	NA	66175208	66175430	Gene ID= novel_gene_chr3_3460 TPM= 2.12 Transcript Type= NA
chr3	66192443	66194682	66192443	66194682	+	transcript3462.chr3.nnic@NA	transcript3462.chr3.nnic	NA	66192443	66194682	Gene ID= novel_gene_chr3_3463 TPM= 2.12 Transcript Type= NA
chr3	66133610	66378927	66133610	66378927	+	ENST00000354883.10@SLC25A26	ENST00000354883.10	protein_coding	66133610,66220742,66236544,66243203,66262051,66263332,66346364,66362860,66369478,66370529,66377690	66133984,66221127,66236700,66243312,66262155,66263379,66346408,66362929,66369542,66370602,66378927	Gene ID= ENSG00000144741.17 TPM= 7.44 Transcript Type= protein_coding
chr3	66370455	66378079	66370455	66378079	+	transcript3481.chr3.nic@SLC25A26	transcript3481.chr3.nic	protein_coding	66370455,66377690	66370602,66378079	Gene ID= ENSG00000144741.17 TPM= 3.19 Transcript Type= NA
chr3	66221012	66378079	66221012	66378079	+	ENST00000336733.10@SLC25A26	ENST00000336733.10	protein_coding	66221012,66243203,66262051,66263332,66346364,66362860,66369478,66370529,66377690	66221127,66243312,66262155,66263379,66346408,66362929,66369542,66370602,66378079	Gene ID= ENSG00000144741.17 TPM= 7.44 Transcript Type= protein_coding
chr3	66378797	66501050	66378797	66501050	-	transcript3468.chr3.nnic@LRIG1	transcript3468.chr3.nnic	protein_coding	66500190,66462438,66417129,66414920,66412871,66410129,66407348,66405198,66398970,66398112,66394040,66385981,66383991,66382982,66382273,66381479,66380577,66378797	66501050,66462509,66417266,66415063,66413014,66410272,66407491,66405278,66399041,66398183,66394203,66386301,66384272,66383401,66382398,66381631,66380861,66380489	Gene ID= ENSG00000144749.13 TPM= 33.99 Transcript Type= NA
chr3	66378797	66500932	66378797	66500932	-	ENST00000273261.7@LRIG1	ENST00000273261.7	protein_coding	66500190,66462438,66451559,66417129,66414920,66412871,66410129,66407348,66405198,66398970,66398112,66394040,66385981,66383991,66382982,66382273,66381479,66380577,66378797	66500932,66462509,66451633,66417266,66415063,66413014,66410272,66407491,66405278,66399041,66398183,66394203,66386301,66384272,66383401,66382398,66381631,66380861,66380489	Gene ID= ENSG00000144749.13 TPM= 67.98 Transcript Type= protein_coding
chr3	66494353	66497726	66494353	66497726	+	transcript3482.chr3.nnic@NA	transcript3482.chr3.nnic	NA	66494353	66497726	Gene ID= novel_gene_chr3_3483 TPM= 9.56 Transcript Type= NA
chr3	66998307	67011210	66998307	67011210	+	ENST00000417314.2@KBTBD8	ENST00000417314.2	protein_coding	66998307,66998981,67003195,67007922	66998371,66999191,67004309,67011210	Gene ID= ENSG00000163376.11 TPM= 3.72 Transcript Type= protein_coding
chr3	66998308	67011210	66998308	67011210	+	transcript3485.chr3.nic@KBTBD8	transcript3485.chr3.nic	protein_coding	66998308,67003195,67007922	66998371,67004309,67011210	Gene ID= ENSG00000163376.11 TPM= 2.66 Transcript Type= NA
chr3	67374719	67654614	67374719	67654614	-	ENST00000307227.9@SUCLG2	ENST00000307227.9	protein_coding	67654503,67609455,67529087,67528132,67520482,67518247,67508807,67498134,67495798,67400731,67374719	67654614,67609596,67529186,67528222,67520634,67518336,67508903,67498295,67495940,67400851,67375859	Gene ID= ENSG00000172340.14 TPM= 138.61 Transcript Type= protein_coding
chr3	67752454	67755444	67752454	67755444	+	transcript3503.chr3.nnic@NA	transcript3503.chr3.nnic	NA	67752454	67755444	Gene ID= novel_gene_chr3_3504 TPM= 2.12 Transcript Type= NA
chr3	68975232	69013698	68975232	69013698	-	transcript3507.chr3.nnic@EOGT	transcript3507.chr3.nnic	protein_coding	69013574,69012515,69011936,69009637,69008428,69007713,69005140,69004378,69001608,68998011,68991822,68988925,68988506,68988295,68987445,68982811,68979668,68978333,68975232	69013698,69012799,69011991,69009860,69008528,69007821,69005234,69004482,69001714,68998114,68991872,68989017,68988577,68988381,68987513,68982872,68979787,68978435,68977764	Gene ID= ENSG00000163378.13 TPM= 4.25 Transcript Type= NA
chr3	68975214	69013961	68975214	69013961	-	ENST00000383701.7@EOGT	ENST00000383701.7	protein_coding	69013574,69012515,69011936,69009637,69008428,69007713,69005140,69004378,69001608,68998011,68988925,68988506,68988295,68987445,68982811,68979668,68978333,68975214	69013961,69012799,69011991,69009860,69008528,69007821,69005234,69004482,69001714,68998114,68989017,68988577,68988381,68987513,68982872,68979787,68978435,68977764	Gene ID= ENSG00000163378.13 TPM= 8.5 Transcript Type= protein_coding
chr3	68975227	68977157	68975227	68977157	-	ENST00000615922.1@EOGT	ENST00000615922.1	protein_coding	68975227	68977157	Gene ID= ENSG00000163378.13 TPM= 5.31 Transcript Type= protein_coding
chr3	69012693	69014489	69012693	69014489	+	transcript3522.chr3.nnic@NA	transcript3522.chr3.nnic	NA	69012693	69014489	Gene ID= novel_gene_chr3_3523 TPM= 5.31 Transcript Type= NA
chr3	69027940	69052296	69027940	69052296	-	transcript3529.chr3.nic@TMF1	transcript3529.chr3.nic	protein_coding	69051945,69047358,69044492,69043750,69042807,69039551,69038843,69038564,69035023,69033548,69029815,69028226,69027940	69052296,69048562,69044595,69043876,69042912,69039693,69039009,69038720,69035115,69033704,69030007,69028295,69027992	Gene ID= ENSG00000144747.15 TPM= 4.25 Transcript Type= NA
chr3	69054730	69080408	69054730	69080408	-	ENST00000361055.8@UBA3	ENST00000361055.8	protein_coding	69080334,69080112,69077798,69075430,69071535,69067928,69064068,69063439,69062982,69062077,69061814,69057256,69056779,69056612,69056183,69056000,69055851,69054730	69080408,69080153,69077918,69075510,69071617,69068008,69064111,69063503,69063137,69062179,69061927,69057309,69056815,69056693,69056283,69056063,69055905,69055525	Gene ID= ENSG00000144744.16 TPM= 99.05 Transcript Type= protein_coding
chr3	69054730	69080408	69054730	69080408	-	ENST00000349511.8@UBA3	ENST00000349511.8	protein_coding	69080334,69077798,69075430,69071535,69067928,69064068,69063439,69062982,69062077,69061814,69057256,69056779,69056612,69056183,69056000,69055851,69054730	69080408,69077918,69075510,69071617,69068008,69064111,69063503,69063137,69062179,69061927,69057309,69056815,69056693,69056283,69056063,69055905,69055525	Gene ID= ENSG00000144744.16 TPM= 33.19 Transcript Type= protein_coding
chr3	69054730	69080390	69054730	69080390	-	transcript3538.chr3.nic@UBA3	transcript3538.chr3.nic	protein_coding	69080334,69080112,69077798,69071535,69067928,69064068,69063439,69062982,69062077,69061814,69057256,69056779,69056612,69056183,69056000,69055851,69054730	69080390,69080153,69077918,69071617,69068008,69064111,69063503,69063137,69062179,69061927,69057309,69056815,69056693,69056283,69056063,69055905,69055525	Gene ID= ENSG00000144744.16 TPM= 7.17 Transcript Type= NA
chr3	69054730	69080381	69054730	69080381	-	ENST00000415609.6@UBA3	ENST00000415609.6	protein_coding	69080334,69077798,69071535,69067928,69064068,69063439,69062982,69062077,69061814,69057256,69056779,69056612,69056183,69056000,69055851,69054730	69080381,69077918,69071617,69068008,69064111,69063503,69063137,69062179,69061927,69057309,69056815,69056693,69056283,69056063,69055905,69055525	Gene ID= ENSG00000144744.16 TPM= 9.29 Transcript Type= protein_coding
chr3	69084944	69106066	69084944	69106066	+	ENST00000273258.3@ARL6IP5	ENST00000273258.3	protein_coding	69084944,69101839,69104464	69085223,69102056,69106066	Gene ID= ENSG00000144746.6 TPM= 267.66 Transcript Type= protein_coding
chr3	69085023	69087491	69085023	69087491	+	transcript3557.chr3.nnic@NA	transcript3557.chr3.nnic	NA	69085023	69087491	Gene ID= novel_gene_chr3_3558 TPM= 3.19 Transcript Type= NA
chr3	69091656	69092763	69091656	69092763	-	transcript3559.chr3.nnic@NA	transcript3559.chr3.nnic	NA	69091656	69092763	Gene ID= novel_gene_chr3_3560 TPM= 4.25 Transcript Type= NA
chr3	69108672	69122595	69108672	69122595	-	ENST00000489031.5@LMOD3	ENST00000489031.5	protein_coding	69122504,69122093,69118699,69108672	69122595,69122409,69120060,69109121	Gene ID= ENSG00000163380.15 TPM= 9.56 Transcript Type= protein_coding
chr3	69106872	69122566	69106872	69122566	-	ENST00000420581.6@LMOD3	ENST00000420581.6	protein_coding	69122093,69118699,69106872	69122566,69120060,69109121	Gene ID= ENSG00000163380.15 TPM= 14.87 Transcript Type= protein_coding
chr3	69170264	69353686	69170264	69353686	-	transcript3570.chr3.nic@FRMD4B	transcript3570.chr3.nic	protein_coding	69353544,69313452,69311263,69302343,69287752,69250043,69249226,69224607,69221858,69218322,69216263,69198698,69196900,69196255,69195231,69195022,69193648,69189896,69187770,69182598,69180899,69176524,69170264	69353686,69313517,69311357,69302435,69287836,69250099,69249248,69224690,69221923,69218379,69216349,69198774,69197038,69196396,69195364,69195141,69193873,69189952,69187917,69182717,69181710,69176656,69171981	Gene ID= ENSG00000114541.14 TPM= 2.12 Transcript Type= NA
chr3	69739457	69965668	69739457	69965668	+	transcript3573.chr3.nnic@MITF	transcript3573.chr3.nnic	protein_coding	69739457,69818334,69879134,69937822,69939098,69941236,69949051,69951830,69956455,69959273,69964847	69739701,69818464,69879383,69938049,69939181,69941331,69949168,69951886,69956530,69959420,69965668	Gene ID= ENSG00000187098.14 TPM= 12.82 Transcript Type= NA
chr3	69739435	69968336	69739435	69968336	+	ENST00000352241.8@MITF	ENST00000352241.8	protein_coding	69739435,69879134,69937822,69939098,69941236,69949051,69951830,69956455,69959273,69964847	69739701,69879383,69938049,69939181,69941331,69949168,69951886,69956530,69959420,69968336	Gene ID= ENSG00000187098.14 TPM= 48.33 Transcript Type= protein_coding
chr3	69866242	69965668	69866242	69965668	+	transcript3587.chr3.nic@MITF	transcript3587.chr3.nic	protein_coding	69866242,69879134,69937822,69939098,69941236,69949051,69951812,69956455,69959273,69964847	69866346,69879383,69938049,69939181,69941331,69949168,69951886,69956530,69959420,69965668	Gene ID= ENSG00000187098.14 TPM= 7.86 Transcript Type= NA
chr3	69866212	69965647	69866212	69965647	+	ENST00000314589.9@MITF	ENST00000314589.9	protein_coding	69866212,69879134,69937822,69939098,69941236,69949051,69951830,69956455,69959273,69964847	69866346,69879383,69938049,69939181,69941331,69949168,69951886,69956530,69959420,69965647	Gene ID= ENSG00000187098.14 TPM= 15.4 Transcript Type= protein_coding
chr3	69750385	69751963	69750385	69751963	-	transcript3594.chr3.nnic@NA	transcript3594.chr3.nnic	NA	69750385	69751963	Gene ID= novel_gene_chr3_3595 TPM= 8.5 Transcript Type= NA
chr3	70952820	70956672	70952820	70956672	-	transcript3598.chr3.nnic@NA	transcript3598.chr3.nnic	NA	70952820	70956672	Gene ID= novel_gene_chr3_3599 TPM= 2.12 Transcript Type= NA
chr3	70956123	70957208	70956123	70957208	-	transcript3596.chr3.nnic@NA	transcript3596.chr3.nnic	NA	70956123	70957208	Gene ID= novel_gene_chr3_3597 TPM= 2.12 Transcript Type= NA
chr3	70959191	71581926	70959191	71581926	-	transcript3604.chr3.nic@FOXP1	transcript3604.chr3.nic	protein_coding	71581549,71493426,71359150,71299820,71198202,71112536,71053636,71052537,71046942,71041328,71015549,71000972,70987994,70977828,70977643,70976941,70972555,70970736,70965890,70959191	71581926,71493555,71359244,71299880,71198392,71112637,71053773,71052626,71047095,71041532,71015653,71001059,70988077,70978029,70977722,70977042,70972676,70970805,70966056,70959391	Gene ID= ENSG00000114861.18 TPM= 4.25 Transcript Type= NA
chr3	70959191	71132295	70959191	71132295	-	transcript3607.chr3.nnic@FOXP1	transcript3607.chr3.nnic	protein_coding	71132091,71112536,71053636,71052537,71046942,71041328,71015549,71000972,70987994,70977828,70977643,70976941,70972555,70970736,70965890,70959191	71132295,71112637,71053773,71052626,71047095,71041532,71015653,71001059,70988077,70978029,70977722,70977042,70972676,70970805,70966056,70959391	Gene ID= ENSG00000114861.18 TPM= 4.25 Transcript Type= NA
chr3	71579617	71583722	71579617	71583722	-	transcript3614.chr3.nic@FOXP1	transcript3614.chr3.nic	protein_coding	71583571,71579617	71583722,71581697	Gene ID= ENSG00000114861.18 TPM= 5.31 Transcript Type= NA
chr3	70959204	71583753	70959204	71583753	-	ENST00000493089.5@FOXP1	ENST00000493089.5	protein_coding	71583571,71581549,71493426,71359150,71299820,71198202,71112536,71053636,71052537,71046942,71041328,71015549,71000972,70987994,70977828,70977643,70976941,70972555,70970736,70965890,70959204	71583753,71581697,71493555,71359244,71299880,71198392,71112637,71053773,71052626,71047095,71041532,71015653,71001059,70988077,70978029,70977719,70977042,70972676,70970805,70966056,70959391	Gene ID= ENSG00000114861.18 TPM= 12.75 Transcript Type= protein_coding
chr3	71090132	71093284	71090132	71093284	+	transcript3615.chr3.nnic@NA	transcript3615.chr3.nnic	NA	71090132	71093284	Gene ID= novel_gene_chr3_3616 TPM= 2.12 Transcript Type= NA
chr3	71498659	71501032	71498659	71501032	+	transcript3617.chr3.nnic@NA	transcript3617.chr3.nnic	NA	71498659	71501032	Gene ID= novel_gene_chr3_3618 TPM= 2.12 Transcript Type= NA
chr3	71681860	71725400	71681860	71725400	-	transcript3641.chr3.nic@EIF4E3	transcript3641.chr3.nic	protein_coding	71725192,71710412,71693875,71690010,71681860	71725400,71710484,71693941,71690165,71684728	Gene ID= ENSG00000163412.12 TPM= 12.75 Transcript Type= NA
chr3	71682727	71753624	71682727	71753624	-	ENST00000295612.7@EIF4E3	ENST00000295612.7	protein_coding	71753463,71728476,71710412,71699614,71696460,71693875,71690010,71682727	71753624,71728623,71710484,71699708,71696520,71693941,71690165,71684728	Gene ID= ENSG00000163412.12 TPM= 9.56 Transcript Type= protein_coding
chr3	71679122	71682698	71679122	71682698	-	transcript3649.chr3.nnic@NA	transcript3649.chr3.nnic	NA	71679122	71682698	Gene ID= novel_gene_chr3_3650 TPM= 2.12 Transcript Type= NA
chr3	71754050	71756496	71754050	71756496	+	ENST00000304411.2@GPR27	ENST00000304411.2	protein_coding	71754050	71756496	Gene ID= ENSG00000170837.2 TPM= 16.99 Transcript Type= protein_coding
chr3	72371825	72446621	72371825	72446621	-	ENST00000477973.3@RYBP	ENST00000477973.3	protein_coding	72446496,72379251,72379040,72371825	72446621,72379427,72379138,72378637	Gene ID= ENSG00000163602.10 TPM= 2.12 Transcript Type= protein_coding
chr3	72413703	72415595	72413703	72415595	+	transcript3658.chr3.nnic@NA	transcript3658.chr3.nnic	NA	72413703	72415595	Gene ID= novel_gene_chr3_3659 TPM= 2.12 Transcript Type= NA
chr3	72749279	72848480	72749279	72848480	-	ENST00000325599.12@SHQ1	ENST00000325599.12	protein_coding	72848198,72844359,72842280,72841045,72832369,72824424,72817230,72815350,72812671,72792916,72749279	72848480,72844423,72842402,72841199,72832481,72824551,72817384,72815403,72812794,72793036,72750836	Gene ID= ENSG00000144736.13 TPM= 9.56 Transcript Type= protein_coding
chr3	72813825	72848476	72813825	72848476	-	transcript3668.chr3.nic@SHQ1	transcript3668.chr3.nic	protein_coding	72848198,72844359,72842280,72841045,72832369,72824424,72813825	72848476,72844423,72842402,72841199,72832481,72824551,72817384	Gene ID= ENSG00000144736.13 TPM= 2.12 Transcript Type= NA
chr3	72888043	72976825	72888043	72976825	+	transcript3687.chr3.nnic@GXYLT2	transcript3687.chr3.nnic	protein_coding	72888043,72908367,72922204,72957234,72967547,72974977	72888508,72908559,72922335,72957352,72967719,72976825	Gene ID= ENSG00000172986.12 TPM= 2.12 Transcript Type= NA
chr3	72888073	72976926	72888073	72976926	+	ENST00000389617.8@GXYLT2	ENST00000389617.8	protein_coding	72888073,72908367,72922204,72955098,72957229,72967547,72974977	72888508,72908559,72922335,72955349,72957352,72967719,72976926	Gene ID= ENSG00000172986.12 TPM= 3.19 Transcript Type= protein_coding
chr3	72996780	73067189	72996780	73067189	+	transcript3678.chr3.nic@PPP4R2	transcript3678.chr3.nic	protein_coding	72996780,72998077,73047186,73059037,73061023,73063673,73064003,73064852	72997071,72998158,73047356,73059130,73061060,73063747,73064146,73067189	Gene ID= ENSG00000163605.14 TPM= 2.12 Transcript Type= NA
chr3	72996780	73067576	72996780	73067576	+	transcript3680.chr3.nic@PPP4R2	transcript3680.chr3.nic	protein_coding	72996780,72998077,73047186,73059037,73061023,73064003,73064852,73065397	72997071,72998158,73047356,73059130,73061060,73064146,73065141,73067576	Gene ID= ENSG00000163605.14 TPM= 2.12 Transcript Type= NA
chr3	72996780	73049094	72996780	73049094	+	transcript3692.chr3.nic@PPP4R2	transcript3692.chr3.nic	protein_coding	72996780,72998077,73047186	72997071,72998158,73049094	Gene ID= ENSG00000163605.14 TPM= 2.12 Transcript Type= NA
chr3	72996785	73069199	72996785	73069199	+	ENST00000356692.9@PPP4R2	ENST00000356692.9	protein_coding	72996785,72998077,73047186,73059037,73061023,73063673,73064003,73064852,73065397	72997071,72998158,73047356,73059130,73061060,73063747,73064146,73065141,73069199	Gene ID= ENSG00000163605.14 TPM= 14.87 Transcript Type= protein_coding
chr3	73387987	73624932	73387987	73624932	-	transcript3701.chr3.nic@PDZRN3	transcript3701.chr3.nic	protein_coding	73624103,73608598,73602354,73404148,73400922,73391018,73389816,73387987	73624932,73608684,73602461,73404395,73401009,73391116,73389878,73388069	Gene ID= ENSG00000121440.14 TPM= 4.25 Transcript Type= NA
chr3	73402942	73624932	73402942	73624932	-	transcript3702.chr3.nic@PDZRN3	transcript3702.chr3.nic	protein_coding	73624103,73608598,73602354,73402942	73624932,73608684,73602461,73404395	Gene ID= ENSG00000121440.14 TPM= 2.12 Transcript Type= NA
chr3	73382433	73624940	73382433	73624940	-	ENST00000263666.8@PDZRN3	ENST00000263666.8	protein_coding	73624103,73608598,73602354,73404148,73400922,73391018,73389816,73387968,73385669,73382433	73624940,73608684,73602461,73404395,73401009,73391116,73389878,73388069,73385785,73384930	Gene ID= ENSG00000121440.14 TPM= 71.16 Transcript Type= protein_coding
chr3	73413380	73416000	73413380	73416000	+	transcript3711.chr3.nnic@NA	transcript3711.chr3.nnic	NA	73413380	73416000	Gene ID= novel_gene_chr3_3712 TPM= 4.25 Transcript Type= NA
chr3	73419341	73424390	73419341	73424390	+	transcript3713.chr3.nnic@NA	transcript3713.chr3.nnic	NA	73419341	73424390	Gene ID= novel_gene_chr3_3714 TPM= 2.12 Transcript Type= NA
chr3	73489577	73490818	73489577	73490818	-	transcript3721.chr3.nnic@NA	transcript3721.chr3.nnic	NA	73489577	73490818	Gene ID= novel_gene_chr3_3722 TPM= 2.12 Transcript Type= NA
chr3	73498590	73501898	73498590	73501898	-	transcript3719.chr3.nnic@NA	transcript3719.chr3.nnic	NA	73498590	73501898	Gene ID= novel_gene_chr3_3720 TPM= 3.19 Transcript Type= NA
chr3	73544391	73548136	73544391	73548136	-	transcript3723.chr3.nnic@NA	transcript3723.chr3.nnic	NA	73544391	73548136	Gene ID= novel_gene_chr3_3724 TPM= 2.12 Transcript Type= NA
chr3	73555053	73558233	73555053	73558233	+	transcript3715.chr3.nnic@NA	transcript3715.chr3.nnic	NA	73555053	73558233	Gene ID= novel_gene_chr3_3716 TPM= 3.19 Transcript Type= NA
chr3	73624313	73627895	73624313	73627895	+	transcript3709.chr3.nnic@NA	transcript3709.chr3.nnic	NA	73624313	73627895	Gene ID= novel_gene_chr3_3710 TPM= 7.44 Transcript Type= NA
chr3	75422863	75435125	75422863	75435125	-	transcript3726.chr3.nnic@FAM86DP	transcript3726.chr3.nnic	transcribed_unprocessed_pseudogene	75434918,75432808,75430832,75429136,75426450,75422863	75435125,75432870,75430914,75429237,75426599,75423061	Gene ID= ENSG00000244026.6 TPM= 2.12 Transcript Type= NA
chr3	75415310	75435067	75415310	75435067	-	transcript3727.chr3.nnic@FAM86DP	transcript3727.chr3.nnic	transcribed_unprocessed_pseudogene	75434918,75432808,75430832,75426450,75415310	75435067,75432870,75430914,75426599,75416844	Gene ID= ENSG00000244026.6 TPM= 2.12 Transcript Type= NA
chr3	75421566	75435125	75421566	75435125	-	transcript3729.chr3.nic@FAM86DP	transcript3729.chr3.nic	transcribed_unprocessed_pseudogene	75434918,75432808,75430832,75426450,75421566	75435125,75432870,75430914,75426621,75423061	Gene ID= ENSG00000244026.6 TPM= 6.37 Transcript Type= NA
chr3	75672261	75679303	75672261	75679303	+	transcript3738.chr3.nnic@LINC00960	transcript3738.chr3.nnic	lincRNA	75672261,75675764,75675968,75678833	75672769,75675880,75676128,75679303	Gene ID= ENSG00000242516.1 TPM= 2.12 Transcript Type= NA
chr3	75672260	75679297	75672260	75679297	+	transcript3740.chr3.nnic@LINC00960	transcript3740.chr3.nnic	lincRNA	75672260,75673194,75678833	75672769,75675880,75679297	Gene ID= ENSG00000242516.1 TPM= 2.12 Transcript Type= NA
chr3	75735875	75785592	75735875	75785592	-	transcript3746.chr3.nic@ZNF717	transcript3746.chr3.nic	protein_coding	75785384,75783306,75741610,75741276,75735875	75785592,75783364,75741736,75741368,75739345	Gene ID= ENSG00000227124.8 TPM= 3.19 Transcript Type= NA
chr3	75740881	75785592	75740881	75785592	-	transcript3747.chr3.nic@ZNF717	transcript3747.chr3.nic	protein_coding	75785384,75783306,75741610,75740881	75785592,75783364,75741736,75741368	Gene ID= ENSG00000227124.8 TPM= 2.12 Transcript Type= NA
chr3	75729961	75785553	75729961	75785553	-	ENST00000477374.5@ZNF717	ENST00000477374.5	protein_coding	75785384,75783306,75741610,75741276,75732060,75729961	75785553,75783364,75741736,75741368,75732121,75730618	Gene ID= ENSG00000227124.8 TPM= 2.12 Transcript Type= protein_coding
chr3	78597240	79019459	78597240	79019459	-	ENST00000618833.4@ROBO1	ENST00000618833.4	protein_coding	79018407,78938601,78746743,78717763,78717275,78714397,78688648,78685746,78670096,78668484,78668134,78667883,78661993,78661030,78659686,78657098,78651732,78646148,78639744,78635773,78633935,78631161,78627321,78617635,78614648,78606733,78600113,78597240	79019459,78938927,78746900,78717883,78717413,78714524,78688781,78685917,78670301,78668565,78668302,78668049,78662114,78661261,78659807,78657269,78651929,78646190,78639898,78636108,78634042,78631305,78627569,78618041,78614800,78607041,78600309,78598927	Gene ID= ENSG00000169855.19 TPM= 6.37 Transcript Type= protein_coding
chr3	81489699	81762161	81489699	81762161	-	ENST00000429644.6@GBE1	ENST00000429644.6	protein_coding	81761375,81705444,81670838,81649796,81648856,81646392,81642781,81593908,81591037,81586092,81581165,81577925,81536911,81535195,81499110,81489699	81762161,81705613,81670953,81649921,81648991,81646482,81642990,81594023,81591164,81586190,81581275,81578096,81537095,81535325,81499227,81490463	Gene ID= ENSG00000114480.12 TPM= 354.5 Transcript Type= protein_coding
chr3	84050229	84051439	84050229	84051439	+	transcript3795.chr3.nnic@NA	transcript3795.chr3.nnic	NA	84050229	84051439	Gene ID= novel_gene_chr3_3796 TPM= 3.19 Transcript Type= NA
chr3	85244471	85246658	85244471	85246658	-	transcript3797.chr3.nnic@NA	transcript3797.chr3.nnic	NA	85244471	85246658	Gene ID= novel_gene_chr3_3798 TPM= 2.12 Transcript Type= NA
chr3	87227285	87255499	87227285	87255499	+	ENST00000263780.8@CHMP2B	ENST00000263780.8	protein_coding	87227285,87240699,87245714,87249875,87253404,87253712	87227556,87240790,87245908,87249977,87253510,87255499	Gene ID= ENSG00000083937.8 TPM= 20.18 Transcript Type= protein_coding
chr3	88055414	88059068	88055414	88059068	-	ENST00000482016.5@CGGBP1	ENST00000482016.5	protein_coding	88058815,88058019,88057191,88055414	88059068,88058223,88057292,88055999	Gene ID= ENSG00000163320.10 TPM= 1.06 Transcript Type= protein_coding
chr3	88051944	88059048	88051944	88059048	-	ENST00000309534.10@CGGBP1	ENST00000309534.10	protein_coding	88058815,88058019,88051944	88059048,88058223,88055999	Gene ID= ENSG00000163320.10 TPM= 5.31 Transcript Type= protein_coding
chr3	88057343	88058985	88057343	88058985	-	transcript3815.chr3.nnic@NA	transcript3815.chr3.nnic	NA	88057343	88058985	Gene ID= novel_gene_chr3_3816 TPM= 11.68 Transcript Type= NA
chr3	88059222	88126575	88059222	88126575	+	transcript3823.chr3.nic@ZNF654	transcript3823.chr3.nic	protein_coding	88059222,88086257,88113115,88126134	88059505,88086402,88113196,88126575	Gene ID= ENSG00000175105.6 TPM= 2.12 Transcript Type= NA
chr3	88059274	88144665	88059274	88144665	+	ENST00000636215.1@ZNF654	ENST00000636215.1	protein_coding	88059274,88086257,88113115,88126134,88128809,88129687,88135061,88138705,88141645	88059505,88086402,88113196,88126269,88129011,88129826,88135202,88141048,88144665	Gene ID= ENSG00000175105.6 TPM= 2.12 Transcript Type= protein_coding
chr3	88149743	88157968	88149743	88157968	+	ENST00000318887.7@C3orf38	ENST00000318887.7	protein_coding	88149743,88153230,88156021	88150185,88153471,88157968	Gene ID= ENSG00000179021.9 TPM= 12.75 Transcript Type= protein_coding
chr3	93873033	93974066	93873033	93974066	-	ENST00000394236.7@PROS1	ENST00000394236.7	protein_coding	93973674,93927250,93924240,93910619,93906021,93905784,93900804,93898448,93896576,93892933,93886336,93884728,93879163,93876966,93873033	93974066,93927407,93924264,93910705,93906143,93905915,93900929,93898569,93896691,93893122,93886503,93884896,93879314,93877191,93874405	Gene ID= ENSG00000184500.14 TPM= 92.67 Transcript Type= protein_coding
chr3	93980144	94039988	93980144	94039988	+	transcript3863.chr3.nic@ARL13B	transcript3863.chr3.nic	protein_coding	93980144,93995874,94003659,94035331,94036552,94039880	93980482,93995944,94003908,94035436,94036754,94039988	Gene ID= ENSG00000169379.15 TPM= 2.12 Transcript Type= NA
chr3	93980142	94055279	93980142	94055279	+	ENST00000303097.11@ARL13B	ENST00000303097.11	protein_coding	93980142,94035331,94036552,94039880,94043015,94049406,94050824,94053187	93980482,94035436,94036754,94039988,94043240,94049522,94050892,94055279	Gene ID= ENSG00000169379.15 TPM= 1.06 Transcript Type= protein_coding
chr3	94057922	94062987	94057922	94062987	-	ENST00000314636.2@DHFR2	ENST00000314636.2	protein_coding	94062746,94057922	94062987,94061606	Gene ID= ENSG00000178700.7 TPM= 3.19 Transcript Type= protein_coding
chr3	94062916	94128545	94062916	94128545	+	ENST00000314622.8@NSUN3	ENST00000314622.8	protein_coding	94062916,94064437,94084107,94094140,94095033,94126211	94063138,94064546,94084450,94094294,94095154,94128545	Gene ID= ENSG00000178694.9 TPM= 1.06 Transcript Type= protein_coding
chr3	97764528	97801242	97764528	97801242	+	ENST00000463745.5@ARL6	ENST00000463745.5	protein_coding	97764528,97768081,97780159,97780615,97784955,97787990,97791771,97798024	97764977,97768230,97780220,97780683,97785049,97788119,97791826,97801242	Gene ID= ENSG00000113966.9 TPM= 3.19 Transcript Type= protein_coding
chr3	97821980	97843221	97821980	97843221	+	transcript3885.chr3.nic@CRYBG3	transcript3885.chr3.nic	protein_coding	97821980,97843195	97822355,97843221	Gene ID= ENSG00000080200.9 TPM= 2.12 Transcript Type= NA
chr3	97822040	97944963	97822040	97944963	+	ENST00000389622.6@CRYBG3	ENST00000389622.6	protein_coding	97822040,97843195,97864217,97871842,97879704,97879985,97881072,97886631,97888341,97889355,97892860,97895959,97898883,97899137,97900453,97912167,97915610,97933694,97936785,97941148,97942284,97943226	97822355,97843261,97864647,97878037,97879748,97880100,97881219,97886767,97888455,97889390,97892993,97896085,97899025,97899263,97900485,97912276,97915736,97933833,97936908,97941306,97942443,97944963	Gene ID= ENSG00000080200.9 TPM= 7.44 Transcript Type= protein_coding
chr3	97944351	97972451	97944351	97972451	-	ENST00000394198.6@RIOX2	ENST00000394198.6	protein_coding	97972381,97967162,97961589,97959051,97954392,97950786,97949844,97947361,97945798,97944351	97972451,97967632,97961708,97959179,97954495,97950888,97950015,97947449,97945887,97945342	Gene ID= ENSG00000170854.17 TPM= 1.06 Transcript Type= protein_coding
chr3	97945338	97972441	97945338	97972441	-	transcript3894.chr3.nic@RIOX2	transcript3894.chr3.nic	protein_coding	97972381,97967162,97961589,97959051,97954392,97950786,97949844,97947361,97945338	97972441,97967632,97961708,97959179,97954495,97950888,97950015,97947449,97945887	Gene ID= ENSG00000170854.17 TPM= 2.12 Transcript Type= NA
chr3	98500787	98522911	98500787	98522911	-	transcript3896.chr3.nic@CLDND1	transcript3896.chr3.nic	protein_coding	98522849,98521133,98518885,98517052,98500787	98522911,98521442,98518995,98517189,98501520	Gene ID= ENSG00000080822.16 TPM= 6.37 Transcript Type= NA
chr3	98506474	98522910	98506474	98522910	-	transcript3897.chr3.nnic@CLDND1	transcript3897.chr3.nnic	protein_coding	98522849,98521133,98518885,98517052,98506474	98522910,98521442,98518995,98517189,98506747	Gene ID= ENSG00000080822.16 TPM= 4.25 Transcript Type= NA
chr3	98515483	98522927	98515483	98522927	-	transcript3898.chr3.nic@CLDND1	transcript3898.chr3.nic	protein_coding	98522849,98521133,98518885,98517052,98515483	98522927,98521442,98518995,98517189,98515832	Gene ID= ENSG00000080822.16 TPM= 12.75 Transcript Type= NA
chr3	98515473	98523043	98515473	98523043	-	ENST00000341181.10@CLDND1	ENST00000341181.10	protein_coding	98522849,98521133,98518885,98517052,98515473	98523043,98521442,98518995,98517189,98516879	Gene ID= ENSG00000080822.16 TPM= 55.23 Transcript Type= protein_coding
chr3	98515483	98523001	98515483	98523001	-	transcript3903.chr3.nic@CLDND1	transcript3903.chr3.nic	protein_coding	98522849,98518885,98517052,98515483	98523001,98518995,98517189,98515832	Gene ID= ENSG00000080822.16 TPM= 3.19 Transcript Type= NA
chr3	98579442	98593723	98579442	98593723	-	ENST00000264193.2@CPOX	ENST00000264193.2	protein_coding	98592949,98591012,98590632,98588713,98585441,98581407,98579442	98593723,98591155,98590742,98588854,98585659,98581511,98580770	Gene ID= ENSG00000080819.6 TPM= 9.56 Transcript Type= protein_coding
chr3	98706219	98733131	98706219	98733131	-	transcript3972.chr3.nnic@ST3GAL6-AS1	transcript3972.chr3.nnic	antisense_RNA	98732426,98718419,98715650,98715376,98706219	98733131,98718521,98715777,98715521,98708316	Gene ID= ENSG00000239445.5 TPM= 3.19 Transcript Type= NA
chr3	98713285	98733131	98713285	98733131	-	transcript3974.chr3.nnic@ST3GAL6-AS1	transcript3974.chr3.nnic	antisense_RNA	98732426,98718419,98715376,98713285	98733131,98718521,98715521,98714498	Gene ID= ENSG00000239445.5 TPM= 2.12 Transcript Type= NA
chr3	98715305	98732651	98715305	98732651	-	ENST00000461931.1@ST3GAL6-AS1	ENST00000461931.1	antisense_RNA	98732426,98718424,98715650,98715305	98732651,98718521,98715777,98715521	Gene ID= ENSG00000239445.5 TPM= 1.06 Transcript Type= antisense_RNA
chr3	98732246	98795254	98732246	98795254	+	transcript3935.chr3.nic@ST3GAL6	transcript3935.chr3.nic	protein_coding	98732246,98756369,98768430,98770879,98772813,98773920,98784945,98788036,98788326,98791841,98793675	98732532,98756540,98768529,98770956,98772916,98773983,98785040,98788222,98788463,98791993,98795254	Gene ID= ENSG00000064225.12 TPM= 7.97 Transcript Type= NA
chr3	98732255	98794362	98732255	98794362	+	ENST00000483910.5@ST3GAL6	ENST00000483910.5	protein_coding	98732255,98768430,98770879,98772813,98773920,98784945,98788036,98788326,98791841,98793675	98732532,98768529,98770956,98772916,98773983,98785040,98788222,98788463,98791993,98794362	Gene ID= ENSG00000064225.12 TPM= 7.44 Transcript Type= protein_coding
chr3	98740227	98742922	98740227	98742922	-	transcript3984.chr3.nnic@NA	transcript3984.chr3.nnic	NA	98740227	98742922	Gene ID= novel_gene_chr3_3985 TPM= 36.11 Transcript Type= NA
chr3	98743002	98747191	98743002	98747191	-	transcript3986.chr3.nnic@NA	transcript3986.chr3.nnic	NA	98743002	98747191	Gene ID= novel_gene_chr3_3987 TPM= 46.74 Transcript Type= NA
chr3	98759346	98761446	98759346	98761446	+	transcript3982.chr3.nnic@NA	transcript3982.chr3.nnic	NA	98759346	98761446	Gene ID= novel_gene_chr3_3983 TPM= 2.12 Transcript Type= NA
chr3	98766407	98768301	98766407	98768301	-	transcript3988.chr3.nnic@NA	transcript3988.chr3.nnic	NA	98766407	98768301	Gene ID= novel_gene_chr3_3989 TPM= 5.31 Transcript Type= NA
chr3	98807907	98901734	98807907	98901734	-	transcript3925.chr3.nic@DCBLD2	transcript3925.chr3.nic	protein_coding	98901122,98881540,98849461,98825315,98822669,98822228,98820248,98819202,98817769,98812332,98811468,98811194,98807907	98901734,98881767,98849598,98825366,98822741,98822361,98820288,98819417,98817893,98812482,98811554,98811319,98808174	Gene ID= ENSG00000057019.15 TPM= 2.12 Transcript Type= NA
chr3	98849388	98901734	98849388	98901734	-	transcript3979.chr3.nic@DCBLD2	transcript3979.chr3.nic	protein_coding	98901122,98881540,98849388	98901734,98881767,98849598	Gene ID= ENSG00000057019.15 TPM= 4.25 Transcript Type= NA
chr3	98795941	98901689	98795941	98901689	-	ENST00000326840.10@DCBLD2	ENST00000326840.10	protein_coding	98901122,98881540,98849461,98825315,98822669,98822228,98820248,98819202,98817769,98812332,98811468,98811194,98808081,98801600,98800579,98795941	98901689,98881767,98849598,98825366,98822741,98822361,98820288,98819417,98817893,98812482,98811554,98811319,98808174,98801649,98800716,98799841	Gene ID= ENSG00000057019.15 TPM= 72.23 Transcript Type= protein_coding
chr3	99638475	99799226	99638475	99799226	+	ENST00000261037.7@COL8A1	ENST00000261037.7	protein_coding	99638475,99675660,99744897,99790680,99794230	99638664,99675721,99745021,99791010,99799226	Gene ID= ENSG00000144810.15 TPM= 23.37 Transcript Type= protein_coding
chr3	99826453	99830342	99826453	99830342	-	transcript4023.chr3.nnic@NA	transcript4023.chr3.nnic	NA	99826453	99830342	Gene ID= novel_gene_chr3_4024 TPM= 5.31 Transcript Type= NA
chr3	99828451	99876197	99828451	99876197	-	transcript4012.chr3.nic@FILIP1L	transcript4012.chr3.nic	protein_coding	99876072,99848295,99828451	99876197,99851070,99830605	Gene ID= ENSG00000168386.18 TPM= 4.25 Transcript Type= NA
chr3	99847923	99876203	99847923	99876203	-	ENST00000383694.3@FILIP1L	ENST00000383694.3	protein_coding	99876072,99847923	99876203,99851070	Gene ID= ENSG00000168386.18 TPM= 64.26 Transcript Type= protein_coding
chr3	100114930	100178599	100114930	100178599	+	ENST00000489081.5@CMSS1	ENST00000489081.5	protein_coding	100114930,100146973,100160430,100162303,100166335,100167738,100171839,100172316,100176327,100178305	100114998,100147061,100160501,100162432,100166394,100167840,100171899,100172403,100176415,100178599	Gene ID= ENSG00000184220.11 TPM= 13.81 Transcript Type= protein_coding
chr3	100261012	100325238	100261012	100325238	+	ENST00000394144.8@TBC1D23	ENST00000394144.8	protein_coding	100261012,100279649,100281742,100283607,100290578,100295087,100295302,100296172,100297923,100299239,100302067,100304846,100306437,100310403,100311833,100316099,100319069,100320777,100323587	100261071,100279760,100281847,100283811,100290701,100295211,100295348,100296275,100298045,100299331,100302237,100304888,100306543,100310542,100311877,100316187,100319204,100320971,100325238	Gene ID= ENSG00000036054.12 TPM= 28.68 Transcript Type= protein_coding
chr3	100334788	100355351	100334788	100355351	+	transcript4038.chr3.nic@NIT2	transcript4038.chr3.nic	protein_coding	100334788,100339087,100339815,100341073,100345585,100346181,100348803,100352404,100354772,100355177	100335112,100339205,100339935,100341161,100345678,100346255,100348881,100352502,100354827,100355351	Gene ID= ENSG00000114021.11 TPM= 9.56 Transcript Type= NA
chr3	100334739	100355351	100334739	100355351	+	ENST00000465368.5@NIT2	ENST00000465368.5	protein_coding	100334739,100339087,100339815,100341073,100345585,100348803,100352404,100354772,100355177	100334798,100339205,100339935,100341161,100346255,100348881,100352502,100354827,100355351	Gene ID= ENSG00000114021.11 TPM= 7.44 Transcript Type= retained_intron
chr3	100384485	100401262	100384485	100401262	-	transcript4047.chr3.nic@TOMM70	transcript4047.chr3.nic	protein_coding	100400626,100386805,100386218,100384485	100401262,100386978,100386344,100384588	Gene ID= ENSG00000154174.7 TPM= 2.12 Transcript Type= NA
chr3	100363431	100401398	100363431	100401398	-	ENST00000284320.5@TOMM70	ENST00000284320.5	protein_coding	100400626,100386805,100386218,100384479,100381615,100377705,100375018,100373538,100372606,100369038,100368044,100363431	100401398,100386978,100386344,100384588,100381763,100377912,100375152,100373645,100372722,100369135,100368166,100365717	Gene ID= ENSG00000154174.7 TPM= 87.1 Transcript Type= protein_coding
chr3	100401180	100456319	100401180	100456319	+	transcript4048.chr3.nnic@LNP1	transcript4048.chr3.nnic	protein_coding	100401180,100451719,100455777	100402439,100451949,100456319	Gene ID= ENSG00000206535.7 TPM= 2.12 Transcript Type= NA
chr3	100401193	100456319	100401193	100456319	+	ENST00000383693.7@LNP1	ENST00000383693.7	protein_coding	100401193,100429697,100451719,100455777	100402439,100429885,100451949,100456319	Gene ID= ENSG00000206535.7 TPM= 5.31 Transcript Type= protein_coding
chr3	100401532	100456188	100401532	100456188	+	ENST00000466996.5@LNP1	ENST00000466996.5	protein_coding	100401532,100429697,100451736,100455777	100402439,100429885,100451949,100456188	Gene ID= ENSG00000206535.7 TPM= 2.12 Transcript Type= nonsense_mediated_decay
chr3	100709425	100748966	100709425	100748966	+	ENST00000240851.8@TFG	ENST00000240851.8	protein_coding	100709425,100713643,100719975,100728712,100732508,100736576,100744833,100748149	100709721,100713869,100720058,100728858,100732672,100736716,100744931,100748966	Gene ID= ENSG00000114354.13 TPM= 202.16 Transcript Type= protein_coding
chr3	100709378	100748927	100709378	100748927	+	ENST00000490574.5@TFG	ENST00000490574.5	protein_coding	100709378,100713643,100719975,100728712,100732508,100736576,100744833,100748149	100709431,100713869,100720058,100728858,100732672,100736716,100744931,100748927	Gene ID= ENSG00000114354.13 TPM= 4.25 Transcript Type= protein_coding
chr3	100709606	100748964	100709606	100748964	+	ENST00000476228.5@TFG	ENST00000476228.5	protein_coding	100709606,100713643,100719975,100728712,100732508,100736576,100744833,100748149	100709721,100713869,100720058,100728858,100732672,100736704,100744931,100748964	Gene ID= ENSG00000114354.13 TPM= 13.1 Transcript Type= protein_coding
chr3	100749156	100993515	100749156	100993515	-	ENST00000471714.5@ABI3BP	ENST00000471714.5	protein_coding	100993306,100926302,100902618,100898762,100886142,100885536,100876512,100875508,100874841,100866879,100864833,100864002,100862838,100862311,100851875,100850660,100850045,100848801,100847602,100846372,100841998,100840820,100840072,100839569,100838402,100838210,100837124,100835601,100834684,100833125,100832264,100830578,100829581,100828393,100825785,100824858,100823458,100822589,100821054,100820220,100818525,100817436,100816688,100815912,100813661,100812467,100811728,100811230,100810412,100808161,100804792,100796409,100794923,100792691,100789454,100787728,100780132,100778284,100775207,100774605,100770743,100765841,100754612,100753819,100752787,100751552,100749156	100993515,100926481,100902686,100898894,100886323,100885588,100876560,100875579,100874933,100866956,100864907,100864076,100862909,100862385,100851940,100850734,100850119,100848875,100847673,100846446,100842039,100840858,100840164,100839616,100838464,100838284,100837171,100835660,100834773,100833157,100832350,100830634,100829664,100828452,100825844,100824941,100823514,100822672,100821113,100820303,100818581,100817495,100816768,100815971,100813735,100812523,100811799,100811277,100810477,100808235,100804866,100796468,100795003,100792768,100789516,100787802,100780209,100778376,100775335,100774673,100770952,100765949,100754691,100753848,100752948,100751674,100750610	Gene ID= ENSG00000154175.16 TPM= 1.06 Transcript Type= protein_coding
chr3	101324273	101513241	101324273	101513241	-	ENST00000314261.11@SENP7	ENST00000314261.11	protein_coding	101513091,101501070,101493873,101458955,101398861,101372008,101367830,101366430,101364834,101361715,101351618,101347872,101343686,101341646,101340095,101337509,101332770,101331985,101330334,101328646,101328478,101327666,101324273	101513241,101501119,101493968,101459052,101399055,101372126,101368011,101366769,101364991,101361861,101351651,101348051,101343954,101341779,101340211,101337631,101332862,101332109,101330386,101328689,101328546,101327816,101326080	Gene ID= ENSG00000138468.15 TPM= 4.25 Transcript Type= protein_coding
chr3	101561862	101566446	101561862	101566446	+	ENST00000309922.6@TRMT10C	ENST00000309922.6	protein_coding	101561862,101564770	101562003,101566446	Gene ID= ENSG00000174173.6 TPM= 2.12 Transcript Type= protein_coding
chr3	101574095	101594437	101574095	101594437	+	ENST00000265260.7@PCNP	ENST00000265260.7	protein_coding	101574095,101579790,101585437,101590215,101592627	101574279,101580004,101585511,101590270,101594437	Gene ID= ENSG00000081154.11 TPM= 133.39 Transcript Type= protein_coding
chr3	101574190	101594407	101574190	101594407	+	ENST00000460231.5@PCNP	ENST00000460231.5	protein_coding	101574190,101579842,101585437,101590215,101592627	101574279,101580004,101585511,101590270,101594407	Gene ID= ENSG00000081154.11 TPM= 72.49 Transcript Type= nonsense_mediated_decay
chr3	101574194	101594437	101574194	101594437	+	ENST00000469941.5@PCNP	ENST00000469941.5	protein_coding	101574194,101585437,101590215,101592627	101574279,101585511,101590270,101594437	Gene ID= ENSG00000081154.11 TPM= 19.73 Transcript Type= protein_coding
chr3	101648889	101677495	101648889	101677495	-	ENST00000312938.4@ZBTB11	ENST00000312938.4	protein_coding	101676605,101671978,101671130,101664964,101664538,101659783,101656104,101654704,101652780,101652496,101648889	101677495,101672213,101671361,101665808,101664714,101660028,101656248,101654821,101652938,101652671,101651683	Gene ID= ENSG00000066422.4 TPM= 1.06 Transcript Type= protein_coding
chr3	101676475	101679217	101676475	101679217	+	ENST00000609682.1@ZBTB11-AS1	ENST00000609682.1	antisense_RNA	101676475	101679217	Gene ID= ENSG00000256628.3 TPM= 2.12 Transcript Type= antisense_RNA
chr3	101681092	101686782	101681092	101686782	-	ENST00000394077.7@RPL24	ENST00000394077.7	protein_coding	101686672,101686482,101685818,101682771,101682429,101681092	101686782,101686557,101685928,101682907,101682492,101681215	Gene ID= ENSG00000114391.12 TPM= 143.92 Transcript Type= protein_coding
chr3	101681091	101686712	101681091	101686712	-	ENST00000464595.1@RPL24	ENST00000464595.1	protein_coding	101686482,101685818,101682771,101682429,101681091	101686712,101685928,101682907,101682492,101681215	Gene ID= ENSG00000114391.12 TPM= 17.53 Transcript Type= retained_intron
chr3	101692847	101696461	101692847	101696461	+	transcript4105.chr3.nnic@NA	transcript4105.chr3.nnic	NA	101692847	101696461	Gene ID= novel_gene_chr3_4106 TPM= 4.25 Transcript Type= NA
chr3	101723925	101770562	101723925	101770562	+	ENST00000341893.7@CEP97	ENST00000341893.7	protein_coding	101723925,101726594,101727383,101728836,101731840,101732488,101755430,101757063,101757634,101762485,101764847	101724719,101726736,101727541,101728937,101731953,101732654,101755594,101757196,101758423,101762560,101770562	Gene ID= ENSG00000182504.10 TPM= 2.12 Transcript Type= protein_coding
chr3	101779442	101827392	101779442	101827392	+	ENST00000491511.6@NXPE3	ENST00000491511.6	protein_coding	101779442,101782110,101782660,101785402,101801235,101807053,101816795,101821404	101779900,101782290,101782780,101785689,101801989,101807126,101817001,101827392	Gene ID= ENSG00000144815.15 TPM= 2.12 Transcript Type= protein_coding
chr3	101779203	101824123	101779203	101824123	+	transcript4129.chr3.nnic@NXPE3	transcript4129.chr3.nnic	protein_coding	101779203,101782110,101782660,101785402,101801235,101807053,101821404	101779324,101782290,101782780,101785689,101801989,101807126,101824123	Gene ID= ENSG00000144815.15 TPM= 4.25 Transcript Type= NA
chr3	101779230	101823623	101779230	101823623	+	ENST00000273347.9@NXPE3	ENST00000273347.9	protein_coding	101779230,101782110,101782660,101785402,101801235,101807053,101816795,101821404	101779324,101782290,101782780,101785689,101801989,101807126,101817001,101823623	Gene ID= ENSG00000144815.15 TPM= 1.06 Transcript Type= protein_coding
chr3	101849514	101861022	101849514	101861022	+	ENST00000326172.9@NFKBIZ	ENST00000326172.9	protein_coding	101849514,101852085,101852738,101852886,101853091,101854578,101855062,101855395,101855733,101857073,101857292,101859318	101849917,101852224,101852768,101852989,101853863,101854683,101855208,101855458,101855902,101857183,101857459,101861022	Gene ID= ENSG00000144802.11 TPM= 3.19 Transcript Type= protein_coding
chr3	105534495	105576120	105534495	105576120	+	transcript4136.chr3.nic@ALCAM	transcript4136.chr3.nic	protein_coding	105534495,105539975,105541633,105545223,105547149,105547390,105550127,105552144,105552468,105571852,105574477	105534845,105540102,105541765,105545335,105547284,105547523,105550259,105552182,105552585,105571964,105576120	Gene ID= ENSG00000170017.12 TPM= 4.25 Transcript Type= NA
chr3	105658269	105868954	105658269	105868954	-	transcript4138.chr3.nnic@CBLB	transcript4138.chr3.nnic	protein_coding	105868736,105867410,105853414,105776396,105751462,105745917,105740494,105737171,105734009,105720047,105703988,105702094,105693494,105685320,105681724,105678431,105671024,105670233,105658269	105868954,105867591,105853664,105776542,105751618,105746038,105740631,105737258,105734140,105720250,105704173,105702459,105693588,105685466,105681818,105678571,105671046,105670352,105659229	Gene ID= ENSG00000114423.18 TPM= 3.19 Transcript Type= NA
chr3	105655461	105869043	105655461	105869043	-	ENST00000264122.8@CBLB	ENST00000264122.8	protein_coding	105868736,105867410,105853414,105776396,105751462,105745917,105740494,105737171,105734009,105720047,105703988,105702094,105693494,105685320,105681724,105681479,105678431,105670233,105655461	105869043,105867591,105853664,105776542,105751618,105746038,105740631,105737258,105734140,105720250,105704173,105702459,105693588,105685466,105681818,105681610,105678571,105670352,105659229	Gene ID= ENSG00000114423.18 TPM= 4.25 Transcript Type= protein_coding
chr3	105673388	105675847	105673388	105675847	-	transcript4147.chr3.nnic@NA	transcript4147.chr3.nnic	NA	105673388	105675847	Gene ID= novel_gene_chr3_4148 TPM= 3.19 Transcript Type= NA
chr3	105728027	105733370	105728027	105733370	+	transcript4145.chr3.nnic@NA	transcript4145.chr3.nnic	NA	105728027	105733370	Gene ID= novel_gene_chr3_4146 TPM= 11.68 Transcript Type= NA
chr3	107109790	107240638	107109790	107240638	-	ENST00000477210.6@LINC00882	ENST00000477210.6	lincRNA	107240443,107129888,107112060,107109790	107240638,107129992,107112146,107110004	Gene ID= ENSG00000242759.6 TPM= 2.12 Transcript Type= lincRNA
chr3	107109790	107240589	107109790	107240589	-	ENST00000607801.5@LINC00882	ENST00000607801.5	lincRNA	107240443,107129888,107109790	107240589,107129992,107110004	Gene ID= ENSG00000242759.6 TPM= 3.19 Transcript Type= lincRNA
chr3	107111485	107240627	107111485	107240627	-	ENST00000479612.6@LINC00882	ENST00000479612.6	lincRNA	107240443,107129888,107111485	107240627,107129992,107112146	Gene ID= ENSG00000242759.6 TPM= 5.31 Transcript Type= lincRNA
chr3	107240692	107248348	107240692	107248348	+	ENST00000466734.5@DUBR	ENST00000466734.5	lincRNA	107240692,107246008	107241087,107248348	Gene ID= ENSG00000243701.5 TPM= 1.06 Transcript Type= lincRNA
chr3	107243221	107245700	107243221	107245700	-	transcript4159.chr3.nnic@NA	transcript4159.chr3.nnic	NA	107243221	107245700	Gene ID= novel_gene_chr3_4160 TPM= 23.37 Transcript Type= NA
chr3	107255249	107258619	107255249	107258619	-	transcript4161.chr3.nnic@NA	transcript4161.chr3.nnic	NA	107255249	107258619	Gene ID= novel_gene_chr3_4162 TPM= 2.12 Transcript Type= NA
chr3	107522936	107811324	107522936	107811324	+	ENST00000415149.6@BBX	ENST00000415149.6	protein_coding	107522936,107526327,107645836,107710452,107716607,107728765,107732956,107744630,107747965,107755598,107772628,107774719,107778371,107791240,107798523,107801095,107805370	107523107,107526398,107645909,107710622,107716849,107728960,107733023,107744710,107748039,107755678,107773636,107774857,107778519,107791299,107798720,107801281,107811324	Gene ID= ENSG00000114439.18 TPM= 2.66 Transcript Type= protein_coding
chr3	107522961	107806342	107522961	107806342	+	ENST00000402543.5@BBX	ENST00000402543.5	protein_coding	107522961,107526327,107645836,107661828,107710452,107716607,107728765,107732956,107744630,107747965,107755598,107772628,107774719,107778371,107798523,107801095,107805370	107523107,107526398,107645909,107661944,107710622,107716849,107728960,107733023,107744710,107748039,107755678,107773636,107774857,107778519,107798720,107801281,107806342	Gene ID= ENSG00000114439.18 TPM= 5.84 Transcript Type= protein_coding
chr3	107807820	107811192	107807820	107811192	+	transcript4174.chr3.nnic@NA	transcript4174.chr3.nnic	NA	107807820	107811192	Gene ID= novel_gene_chr3_4175 TPM= 4.25 Transcript Type= NA
chr3	108047065	108091042	108047065	108091042	-	transcript4182.chr3.nnic@CD47	transcript4182.chr3.nnic	protein_coding	108090863,108079991,108071093,108060745,108059452,108058337,108057477,108047065	108091042,108080344,108071182,108060852,108059544,108058429,108057569,108047292	Gene ID= ENSG00000196776.14 TPM= 3.72 Transcript Type= NA
chr3	108043299	108091025	108043299	108091025	-	ENST00000355354.11@CD47	ENST00000355354.11	protein_coding	108090863,108079991,108071093,108060745,108059452,108058337,108057477,108051939,108043299	108091025,108080344,108071182,108060852,108059544,108058429,108057569,108051970,108047292	Gene ID= ENSG00000196776.14 TPM= 9.56 Transcript Type= protein_coding
chr3	108047081	108091014	108047081	108091014	-	ENST00000361309.5@CD47	ENST00000361309.5	protein_coding	108090863,108079991,108071093,108060745,108059452,108058337,108057477,108051939,108050578,108049619,108047081	108091014,108080344,108071182,108060852,108059544,108058429,108057569,108051970,108050602,108049651,108047292	Gene ID= ENSG00000196776.14 TPM= 4.78 Transcript Type= protein_coding
chr3	108160812	108222570	108160812	108222570	-	ENST00000264538.3@IFT57	ENST00000264538.3	protein_coding	108222111,108219410,108218535,108213931,108206628,108191521,108167793,108166854,108165431,108163663,108160812	108222570,108219572,108218653,108214021,108206696,108191643,108167864,108166985,108165493,108163729,108162655	Gene ID= ENSG00000114446.4 TPM= 5.31 Transcript Type= protein_coding
chr3	108589500	108648112	108589500	108648112	+	transcript4198.chr3.nic@DZIP3	transcript4198.chr3.nic	protein_coding	108589500,108605335,108608089,108611174,108616541,108624444,108625845,108629062,108632953,108634871,108636616,108637496,108642438,108644164,108646617,108647943	108589839,108605438,108608158,108611329,108616657,108624524,108625969,108629176,108633072,108634972,108636708,108637548,108642514,108644781,108646649,108648112	Gene ID= ENSG00000198919.12 TPM= 10.62 Transcript Type= NA
chr3	108589705	108648933	108589705	108648933	+	transcript4204.chr3.nnic@DZIP3	transcript4204.chr3.nnic	protein_coding	108589705,108605335,108608089,108611174,108616541,108624444,108625845,108629062,108632953,108634871,108636616,108637496,108642438,108646617,108647943	108589839,108605438,108608158,108611329,108616657,108624524,108625969,108629176,108633072,108634972,108636708,108637548,108642514,108646649,108648933	Gene ID= ENSG00000198919.12 TPM= 2.12 Transcript Type= NA
chr3	111071743	111135954	111071743	111135954	+	ENST00000485303.5@NECTIN3	ENST00000485303.5	protein_coding	111071743,111112030,111118656,111122121,111126184,111133635	111072177,111112371,111118952,111122238,111126335,111135954	Gene ID= ENSG00000177707.10 TPM= 2.12 Transcript Type= protein_coding
chr3	111199044	111201442	111199044	111201442	+	transcript4210.chr3.nnic@NA	transcript4210.chr3.nnic	NA	111199044	111201442	Gene ID= novel_gene_chr3_4211 TPM= 2.12 Transcript Type= NA
chr3	111859732	111976289	111859732	111976289	+	transcript4213.chr3.nnic@PHLDB2	transcript4213.chr3.nnic	protein_coding	111859732,111884064,111913319,111919072,111920282,111932269,111939475,111940535,111945268,111948932,111949702,111952572,111953930,111957236,111958275,111960145,111962108,111966613,111969690,111973732,111974423	111859878,111885412,111913702,111919215,111920419,111932397,111939630,111940645,111945357,111949075,111949890,111952712,111954029,111957250,111958295,111960180,111962312,111966703,111969909,111973817,111976289	Gene ID= ENSG00000144824.20 TPM= 6.03 Transcript Type= NA
chr3	111859732	111976289	111859732	111976289	+	transcript4214.chr3.nic@PHLDB2	transcript4214.chr3.nic	protein_coding	111859732,111884064,111913319,111919072,111920282,111932269,111939475,111940535,111945268,111948932,111949702,111952572,111953930,111958275,111960145,111962108,111966613,111967678,111969690,111973732,111974423	111859878,111885412,111913702,111919215,111920419,111932397,111939630,111940645,111945357,111949075,111949890,111952712,111954029,111958295,111960180,111962312,111966703,111967824,111969909,111973817,111976289	Gene ID= ENSG00000144824.20 TPM= 11.34 Transcript Type= NA
chr3	111859732	111976289	111859732	111976289	+	transcript4218.chr3.nic@PHLDB2	transcript4218.chr3.nic	protein_coding	111859732,111884064,111913319,111919072,111920282,111932269,111939475,111940535,111945268,111948932,111949702,111952572,111953930,111958275,111962108,111966613,111967678,111969690,111973732,111974423	111859878,111885412,111913702,111919215,111920419,111932397,111939630,111940645,111945357,111949075,111949890,111952712,111954029,111958295,111962312,111966703,111967824,111969909,111973817,111976289	Gene ID= ENSG00000144824.20 TPM= 5.5 Transcript Type= NA
chr3	111859809	111976289	111859809	111976289	+	transcript4220.chr3.nic@PHLDB2	transcript4220.chr3.nic	protein_coding	111859809,111884064,111913319,111919072,111920282,111939475,111940535,111945268,111948932,111949702,111952572,111953930,111958275,111960145,111962108,111966613,111967678,111969690,111973732,111974423	111859878,111885412,111913702,111919215,111920419,111939630,111940645,111945357,111949075,111949890,111952712,111954029,111958295,111960180,111962312,111966703,111967824,111969909,111973817,111976289	Gene ID= ENSG00000144824.20 TPM= 8.58 Transcript Type= NA
chr3	111859855	111869822	111859855	111869822	+	transcript4242.chr3.nnic@PHLDB2	transcript4242.chr3.nnic	protein_coding	111859855,111869425	111859878,111869822	Gene ID= ENSG00000144824.20 TPM= 2.12 Transcript Type= NA
chr3	111859750	111885795	111859750	111885795	+	ENST00000478922.1@PHLDB2	ENST00000478922.1	protein_coding	111859750,111884064	111859878,111885795	Gene ID= ENSG00000144824.20 TPM= 1.06 Transcript Type= protein_coding
chr3	111857984	111859644	111857984	111859644	-	transcript4247.chr3.nnic@NA	transcript4247.chr3.nnic	NA	111857984	111859644	Gene ID= novel_gene_chr3_4248 TPM= 2.12 Transcript Type= NA
chr3	111866016	111868451	111866016	111868451	-	transcript4243.chr3.nnic@NA	transcript4243.chr3.nnic	NA	111866016	111868451	Gene ID= novel_gene_chr3_4244 TPM= 19.12 Transcript Type= NA
chr3	111921606	111924087	111921606	111924087	-	transcript4245.chr3.nnic@NA	transcript4245.chr3.nnic	NA	111921606	111924087	Gene ID= novel_gene_chr3_4246 TPM= 5.31 Transcript Type= NA
chr3	111979035	111993363	111979035	111993363	+	ENST00000273359.7@ABHD10	ENST00000273359.7	protein_coding	111979035,111981784,111986264,111986914,111991377	111979203,111981967,111986375,111987051,111993363	Gene ID= ENSG00000144827.8 TPM= 48.86 Transcript Type= protein_coding
chr3	112086349	112118210	112086349	112118210	+	ENST00000264848.9@C3orf52	ENST00000264848.9	protein_coding	112086349,112093360,112102838,112109543,112112964,112116642	112086545,112093489,112102965,112109613,112113145,112118210	Gene ID= ENSG00000114529.12 TPM= 7.44 Transcript Type= protein_coding
chr3	112277130	112280892	112277130	112280892	-	transcript4253.chr3.nnic@NA	transcript4253.chr3.nnic	NA	112277130	112280892	Gene ID= novel_gene_chr3_4254 TPM= 2.12 Transcript Type= NA
chr3	112333156	112362812	112333156	112362812	+	ENST00000315711.12@CD200	ENST00000315711.12	protein_coding	112333156,112340902,112344962,112347558,112349712,112361543	112333224,112340983,112345288,112347830,112349819,112362812	Gene ID= ENSG00000091972.18 TPM= 1.06 Transcript Type= protein_coding
chr3	112346706	112362338	112346706	112362338	-	transcript4257.chr3.nnic@NA	transcript4257.chr3.nnic	NA	112362043,112346706	112362338,112347222	Gene ID= novel_gene_chr3_4258 TPM= 7.44 Transcript Type= NA
chr3	112532509	112561164	112532509	112561164	-	transcript4260.chr3.nnic@ATG3	transcript4260.chr3.nnic	protein_coding	112561047,112558376,112553280,112550192,112548533,112544057,112541803,112538146,112537735,112536475,112534269,112532509	112561164,112558417,112553329,112550262,112548640,112544106,112541884,112538180,112537890,112536602,112534337,112532780	Gene ID= ENSG00000144848.10 TPM= 2.12 Transcript Type= NA
chr3	112532509	112561963	112532509	112561963	-	ENST00000283290.9@ATG3	ENST00000283290.9	protein_coding	112561457,112558376,112553280,112550192,112548533,112544057,112541803,112538146,112537735,112536475,112534269,112532509	112561963,112558417,112553329,112550262,112548640,112544106,112541884,112538180,112537890,112536602,112534337,112532780	Gene ID= ENSG00000144848.10 TPM= 84.97 Transcript Type= protein_coding
chr3	112532510	112561916	112532510	112561916	-	ENST00000402314.6@ATG3	ENST00000402314.6	protein_coding	112561457,112558376,112553280,112550192,112548533,112544057,112541803,112538146,112537735,112536475,112532510	112561916,112558417,112553329,112550262,112548640,112544106,112541884,112538180,112537890,112536602,112534337	Gene ID= ENSG00000144848.10 TPM= 1.06 Transcript Type= protein_coding
chr3	112562010	112585577	112562010	112585577	+	ENST00000492406.5@SLC35A5	ENST00000492406.5	protein_coding	112562010,112563385,112569171,112570540,112573889,112580546,112582671	112562273,112563533,112569269,112570670,112573956,112581326,112585577	Gene ID= ENSG00000138459.8 TPM= 21.24 Transcript Type= protein_coding
chr3	112638174	112641141	112638174	112641141	-	transcript4269.chr3.nic@CCDC80	transcript4269.chr3.nic	protein_coding	112640327,112638174	112641141,112639916	Gene ID= ENSG00000091986.15 TPM= 22.31 Transcript Type= NA
chr3	112605101	112641300	112605101	112641300	-	ENST00000439685.6@CCDC80	ENST00000439685.6	protein_coding	112640924,112638028,112630113,112618968,112616710,112609978,112607176,112605101	112641300,112639916,112630269,112619104,112616858,112610081,112607256,112605763	Gene ID= ENSG00000091986.15 TPM= 4.25 Transcript Type= protein_coding
chr3	112638267	112641138	112638267	112641138	-	transcript4273.chr3.nic@CCDC80	transcript4273.chr3.nic	protein_coding	112640327,112638267	112641138,112639916	Gene ID= ENSG00000091986.15 TPM= 43.55 Transcript Type= NA
chr3	112990918	113001342	112990918	113001342	+	ENST00000383678.6@GTPBP8	ENST00000383678.6	protein_coding	112990918,112993026,112995135,112996892,112999446,113000850	112991335,112993124,112995265,112996991,112999564,113001342	Gene ID= ENSG00000163607.15 TPM= 3.19 Transcript Type= protein_coding
chr3	113002440	113019839	113002440	113019839	-	ENST00000314400.9@NEPRO	ENST00000314400.9	protein_coding	113019542,113017448,113013953,113013272,113012734,113011045,113010643,113008171,113002440	113019839,113017602,113014032,113013403,113012811,113011406,113010704,113008430,113006004	Gene ID= ENSG00000163608.14 TPM= 1.59 Transcript Type= protein_coding
chr3	113005243	113019861	113005243	113019861	-	ENST00000473284.5@NEPRO	ENST00000473284.5	protein_coding	113019542,113013953,113013272,113012734,113011045,113010643,113008171,113005243	113019861,113014032,113013403,113012811,113011406,113010704,113008430,113006004	Gene ID= ENSG00000163608.14 TPM= 1.06 Transcript Type= nonsense_mediated_decay
chr3	113002444	113019733	113002444	113019733	-	ENST00000383675.6@NEPRO	ENST00000383675.6	protein_coding	113019542,113017448,113013953,113011045,113010643,113008171,113002444	113019733,113017602,113014032,113011406,113010704,113008430,113006004	Gene ID= ENSG00000163608.14 TPM= 1.59 Transcript Type= protein_coding
chr3	113004917	113019654	113004917	113019654	-	ENST00000472637.5@NEPRO	ENST00000472637.5	protein_coding	113019542,113013949,113013272,113012734,113011045,113010643,113008171,113004917	113019654,113014032,113013403,113012811,113011406,113010704,113008430,113006004	Gene ID= ENSG00000163608.14 TPM= 4.25 Transcript Type= nonsense_mediated_decay
chr3	113211482	113287459	113211482	113287459	+	ENST00000495514.5@BOC	ENST00000495514.5	protein_coding	113211482,113216187,113249722,113250555,113268299,113270801,113272410,113273069,113274375,113278098,113278673,113279249,113279824,113280558,113281031,113283411,113284335,113284782,113285372,113286675	113212016,113216274,113249899,113250833,113268445,113270944,113272703,113273341,113274682,113278257,113278783,113279455,113280005,113280663,113281153,113283632,113284567,113284858,113285565,113287459	Gene ID= ENSG00000144857.14 TPM= 13.81 Transcript Type= protein_coding
chr3	113211565	113252005	113211565	113252005	+	ENST00000485230.5@BOC	ENST00000485230.5	protein_coding	113211565,113216187,113249722,113250555	113212016,113216278,113249899,113252005	Gene ID= ENSG00000144857.14 TPM= 2.12 Transcript Type= protein_coding
chr3	113290120	113441514	113290120	113441514	-	ENST00000393845.8@CFAP44	ENST00000393845.8	protein_coding	113441453,113433565,113427187,113426124,113420017,113416525,113409106,113406927,113403852,113401584,113401240,113400545,113399906,113396518,113395750,113380899,113379306,113373411,113366039,113363477,113363145,113358745,113344516,113341744,113333406,113330168,113327616,113326445,113308158,113306201,113305036,113303916,113296725,113294687,113290120	113441514,113433669,113427339,113426277,113420179,113416627,113409322,113407041,113404016,113401739,113401287,113400644,113400000,113396727,113395860,113381060,113379551,113373556,113366309,113363532,113363307,113358875,113344712,113341918,113333583,113330668,113327819,113326640,113308268,113306331,113305152,113304117,113296885,113294821,113291748	Gene ID= ENSG00000206530.10 TPM= 1.06 Transcript Type= protein_coding
chr3	113442718	113515156	113442718	113515156	-	ENST00000295872.8@SPICE1	ENST00000295872.8	protein_coding	113514897,113506507,113503180,113499439,113494049,113493206,113488945,113469099,113468762,113468139,113465653,113460617,113457136,113453466,113450336,113448038,113446589,113442718	113515156,113506605,113503227,113499582,113494142,113493312,113489063,113469238,113468899,113468404,113465784,113460764,113457357,113453950,113450516,113448140,113446676,113445360	Gene ID= ENSG00000163611.11 TPM= 1.06 Transcript Type= protein_coding
chr3	113444639	113515177	113444639	113515177	-	transcript4313.chr3.nic@SPICE1	transcript4313.chr3.nic	protein_coding	113515080,113506507,113503180,113499439,113494049,113493206,113488945,113469099,113468762,113468139,113465653,113460617,113457136,113453466,113450336,113448038,113446589,113444639	113515177,113506605,113503227,113499582,113494142,113493312,113489063,113469238,113468899,113468404,113465784,113460764,113457357,113453950,113450516,113448140,113446676,113445360	Gene ID= ENSG00000163611.11 TPM= 2.12 Transcript Type= NA
chr3	113632052	113696662	113632052	113696662	-	transcript4320.chr3.nnic@USF3	transcript4320.chr3.nnic	protein_coding	113696370,113677282,113674832,113673348,113670121,113632052	113696662,113677397,113674896,113673376,113670203,113632901	Gene ID= ENSG00000176542.9 TPM= 3.19 Transcript Type= NA
chr3	113716460	113746274	113716460	113746274	-	ENST00000240922.7@NAA50	ENST00000240922.7	protein_coding	113745942,113723959,113723422,113722906,113716460	113746274,113724095,113723541,113722972,113721937	Gene ID= ENSG00000121579.12 TPM= 38.24 Transcript Type= protein_coding
chr3	113721590	113746249	113721590	113746249	-	ENST00000481432.5@NAA50	ENST00000481432.5	protein_coding	113745942,113723981,113723422,113722906,113721590	113746249,113724095,113723541,113722972,113721937	Gene ID= ENSG00000121579.12 TPM= 2.12 Transcript Type= nonsense_mediated_decay
chr3	113721656	113746300	113721656	113746300	-	ENST00000493900.5@NAA50	ENST00000493900.5	protein_coding	113745942,113723959,113723422,113722906,113721656	113746300,113724092,113723541,113722972,113721937	Gene ID= ENSG00000121579.12 TPM= 2.12 Transcript Type= protein_coding
chr3	113747019	113812056	113747019	113812056	+	ENST00000273398.7@ATP6V1A	ENST00000273398.7	protein_coding	113747019,113778741,113781050,113784224,113784696,113786232,113788713,113789732,113794872,113795090,113795876,113798243,113803583,113805354,113809335	113747113,113778835,113781178,113784438,113784833,113786383,113788875,113789840,113794994,113795204,113795939,113798446,113803677,113805525,113812056	Gene ID= ENSG00000114573.9 TPM= 7.44 Transcript Type= protein_coding
chr3	114056735	114088349	114056735	114088349	+	ENST00000485050.5@QTRT2	ENST00000485050.5	protein_coding	114056735,114065237,114066228,114067987,114070626,114076743,114079906,114082677,114085673	114056864,114065457,114066283,114068063,114070838,114076942,114080057,114082794,114088349	Gene ID= ENSG00000151576.10 TPM= 2.12 Transcript Type= protein_coding
chr3	114056737	114088422	114056737	114088422	+	ENST00000281273.8@QTRT2	ENST00000281273.8	protein_coding	114056737,114056999,114065237,114066228,114067987,114070626,114076743,114079906,114082677,114085673	114056864,114057106,114065457,114066283,114068063,114070838,114076942,114080057,114082794,114088422	Gene ID= ENSG00000151576.10 TPM= 1.06 Transcript Type= protein_coding
chr3	114314501	114329714	114314501	114329714	-	ENST00000570269.2@AC093010.3	ENST00000570269.2	3prime_overlapping_ncRNA	114314501	114329714	Gene ID= ENSG00000259976.3 TPM= 31.86 Transcript Type= 3prime_overlapping_ncRNA
chr3	114338652	115147277	114338652	115147277	-	transcript4358.chr3.nic@ZBTB20	transcript4358.chr3.nic	protein_coding	115147219,114974366,114900304,114801101,114713976,114693528,114500352,114389005,114380217,114350274,114338652	115147277,114974416,114900342,114801174,114714015,114693575,114500391,114389105,114380404,114351878,114339426	Gene ID= ENSG00000181722.16 TPM= 9.26 Transcript Type= NA
chr3	114338652	114625034	114338652	114625034	-	transcript4372.chr3.nic@ZBTB20	transcript4372.chr3.nic	protein_coding	114624877,114500352,114389005,114380777,114380217,114350274,114338652	114625034,114500391,114389105,114380940,114380404,114351878,114339426	Gene ID= ENSG00000181722.16 TPM= 16.78 Transcript Type= NA
chr3	114338652	114625006	114338652	114625006	-	transcript4375.chr3.nnic@ZBTB20	transcript4375.chr3.nnic	protein_coding	114624877,114624116,114500352,114389005,114380217,114350274,114338652	114625006,114624243,114500391,114389105,114380404,114351878,114339426	Gene ID= ENSG00000181722.16 TPM= 10.32 Transcript Type= NA
chr3	114488887	115147277	114488887	115147277	-	transcript4377.chr3.nnic@ZBTB20	transcript4377.chr3.nnic	protein_coding	115147219,114974366,114900304,114801101,114693528,114500352,114488887	115147277,114974416,114900342,114801174,114693575,114500391,114488982	Gene ID= ENSG00000181722.16 TPM= 2.12 Transcript Type= NA
chr3	114338652	114455020	114338652	114455020	-	transcript4382.chr3.nic@ZBTB20	transcript4382.chr3.nic	protein_coding	114454579,114389005,114380217,114350274,114338652	114455020,114389105,114380404,114351878,114339426	Gene ID= ENSG00000181722.16 TPM= 9.61 Transcript Type= NA
chr3	114338652	114624206	114338652	114624206	-	ENST00000481632.5@ZBTB20	ENST00000481632.5	protein_coding	114624116,114500352,114389005,114380217,114350274,114338652	114624206,114500391,114389105,114380404,114351878,114339426	Gene ID= ENSG00000181722.16 TPM= 9.26 Transcript Type= protein_coding
chr3	114334890	114338422	114334890	114338422	-	transcript4392.chr3.nnic@NA	transcript4392.chr3.nnic	NA	114334890	114338422	Gene ID= novel_gene_chr3_4393 TPM= 6.37 Transcript Type= NA
chr3	114683818	114687624	114683818	114687624	+	transcript4388.chr3.nnic@NA	transcript4388.chr3.nnic	NA	114683818	114687624	Gene ID= novel_gene_chr3_4389 TPM= 2.12 Transcript Type= NA
chr3	119211742	119240946	119211742	119240946	-	ENST00000359213.7@B4GALT4	ENST00000359213.7	protein_coding	119240850,119236853,119235145,119229847,119226809,119224058,119218650,119216240,119211742	119240946,119237070,119235227,119230244,119227041,119224245,119218772,119216344,119212681	Gene ID= ENSG00000121578.12 TPM= 10.62 Transcript Type= protein_coding
chr3	119211732	119240639	119211732	119240639	-	ENST00000483209.5@B4GALT4	ENST00000483209.5	protein_coding	119240361,119236853,119229847,119226809,119224058,119218650,119216240,119211732	119240639,119237070,119230244,119227041,119224245,119218772,119216344,119212681	Gene ID= ENSG00000121578.12 TPM= 2.66 Transcript Type= protein_coding
chr3	119211742	119241103	119211742	119241103	-	ENST00000393765.6@B4GALT4	ENST00000393765.6	protein_coding	119240850,119236853,119229847,119226809,119224058,119218650,119216240,119211742	119241103,119237070,119230244,119227041,119224245,119218772,119216344,119212681	Gene ID= ENSG00000121578.12 TPM= 7.97 Transcript Type= protein_coding
chr3	119294193	119365941	119294193	119365941	+	transcript4409.chr3.nic@ARHGAP31	transcript4409.chr3.nic	protein_coding	119294193,119365316	119295004,119365941	Gene ID= ENSG00000031081.10 TPM= 2.12 Transcript Type= NA
chr3	119294373	119420714	119294373	119420714	+	ENST00000264245.8@ARHGAP31	ENST00000264245.8	protein_coding	119294373,119365316,119368372,119380904,119382292,119383084,119390785,119393467,119399199,119401822,119409496,119413856	119295004,119365418,119368516,119380986,119382399,119383226,119390983,119393591,119399261,119402397,119409776,119420714	Gene ID= ENSG00000031081.10 TPM= 5.31 Transcript Type= protein_coding
chr3	119296824	119299058	119296824	119299058	+	transcript4411.chr3.nnic@NA	transcript4411.chr3.nnic	NA	119296824	119299058	Gene ID= novel_gene_chr3_4412 TPM= 3.19 Transcript Type= NA
chr3	119309951	119312422	119309951	119312422	-	transcript4413.chr3.nnic@NA	transcript4413.chr3.nnic	NA	119309951	119312422	Gene ID= novel_gene_chr3_4414 TPM= 2.12 Transcript Type= NA
chr3	119429500	119463682	119429500	119463682	-	ENST00000319172.9@TMEM39A	ENST00000319172.9	protein_coding	119463336,119461962,119458018,119452447,119447018,119437755,119436791,119434762,119429500	119463682,119462148,119458240,119452530,119447172,119438103,119436978,119434882,119432214	Gene ID= ENSG00000176142.12 TPM= 1.06 Transcript Type= protein_coding
chr3	119468938	119494708	119468938	119494708	+	ENST00000295588.8@POGLUT1	ENST00000295588.8	protein_coding	119468938,119469820,119471309,119477313,119480051,119485328,119486833,119488929,119490551,119491518,119492282	119469106,119469910,119471452,119477448,119480172,119485387,119486932,119488987,119490718,119491574,119494708	Gene ID= ENSG00000163389.10 TPM= 1.06 Transcript Type= protein_coding
chr3	119498519	119524061	119498519	119524061	+	transcript4424.chr3.nnic@TIMMDC1	transcript4424.chr3.nnic	protein_coding	119498519,119500695,119503532,119503954,119513641,119517205,119523606	119498588,119500860,119503620,119504021,119513719,119517315,119524061	Gene ID= ENSG00000113845.9 TPM= 5.84 Transcript Type= NA
chr3	119498532	119525090	119498532	119525090	+	ENST00000494664.5@TIMMDC1	ENST00000494664.5	protein_coding	119498532,119500695,119503532,119503954,119513641,119517205,119523606	119498927,119500860,119503620,119504021,119513719,119517315,119525090	Gene ID= ENSG00000113845.9 TPM= 1.06 Transcript Type= protein_coding
chr3	119579419	119589945	119579419	119589945	+	transcript4442.chr3.nic@ADPRH	transcript4442.chr3.nic	protein_coding	119579419,119580485,119582134,119586285,119587464	119579851,119580636,119582467,119586645,119589945	Gene ID= ENSG00000144843.11 TPM= 6.37 Transcript Type= NA
chr3	119579676	119589945	119579676	119589945	+	ENST00000357003.7@ADPRH	ENST00000357003.7	protein_coding	119579676,119580551,119582134,119586285,119587464	119579851,119580636,119582467,119586645,119589945	Gene ID= ENSG00000144843.11 TPM= 8.5 Transcript Type= protein_coding
chr3	119597842	119629811	119597842	119629811	+	ENST00000273371.8@PLA1A	ENST00000273371.8	protein_coding	119597842,119606774,119608770,119609468,119613017,119616012,119618019,119619563,119625124,119628701,119629384	119597986,119606975,119608947,119609576,119613118,119616101,119618186,119619652,119625232,119628865,119629811	Gene ID= ENSG00000144837.8 TPM= 1.06 Transcript Type= protein_coding
chr3	119642059	119660894	119642059	119660894	-	transcript4436.chr3.nic@POPDC2	transcript4436.chr3.nic	protein_coding	119660520,119659933,119654505,119648260,119643367,119642059	119660894,119660063,119654613,119648668,119643449,119642561	Gene ID= ENSG00000121577.13 TPM= 15.42 Transcript Type= NA
chr3	119642059	119660894	119642059	119660894	-	transcript4451.chr3.nic@POPDC2	transcript4451.chr3.nic	protein_coding	119660520,119659933,119654505,119648119,119642059	119660894,119660063,119654613,119648668,119642561	Gene ID= ENSG00000121577.13 TPM= 53.31 Transcript Type= NA
chr3	119642059	119660894	119642059	119660894	-	transcript4454.chr3.nic@POPDC2	transcript4454.chr3.nic	protein_coding	119660520,119659933,119654505,119648260,119642059	119660894,119660063,119654613,119648668,119642561	Gene ID= ENSG00000121577.13 TPM= 74.9 Transcript Type= NA
chr3	119642058	119660653	119642058	119660653	-	transcript4468.chr3.nnic@POPDC2	transcript4468.chr3.nnic	protein_coding	119659933,119642058	119660653,119642561	Gene ID= ENSG00000121577.13 TPM= 5.86 Transcript Type= NA
chr3	119642059	119660590	119642059	119660590	-	ENST00000264231.7@POPDC2	ENST00000264231.7	protein_coding	119659933,119654505,119648260,119642059	119660590,119654613,119648668,119642561	Gene ID= ENSG00000121577.13 TPM= 91.63 Transcript Type= protein_coding
chr3	119642058	119660644	119642058	119660644	-	ENST00000341124.9@POPDC2	ENST00000341124.9	protein_coding	119659933,119654505,119648119,119643367,119642058	119660644,119654613,119648668,119643449,119642561	Gene ID= ENSG00000121577.13 TPM= 9.66 Transcript Type= nonsense_mediated_decay
chr3	119638507	119640987	119638507	119640987	+	transcript4472.chr3.nnic@NA	transcript4472.chr3.nnic	NA	119638507	119640987	Gene ID= novel_gene_chr3_4473 TPM= 38.24 Transcript Type= NA
chr3	119641357	119645581	119641357	119645581	+	transcript4470.chr3.nnic@NA	transcript4470.chr3.nnic	NA	119641357	119645581	Gene ID= novel_gene_chr3_4471 TPM= 14.87 Transcript Type= NA
chr3	119669532	119677346	119669532	119677346	-	ENST00000484810.5@COX17	ENST00000484810.5	protein_coding	119677204,119676862,119675145,119669532	119677346,119676966,119675233,119669665	Gene ID= ENSG00000138495.6 TPM= 3.19 Transcript Type= protein_coding
chr3	119674379	119677364	119674379	119677364	-	ENST00000497116.1@COX17	ENST00000497116.1	protein_coding	119677204,119675145,119674379	119677364,119675233,119674788	Gene ID= ENSG00000138495.6 TPM= 2.12 Transcript Type= protein_coding
chr3	119671873	119674400	119671873	119674400	+	transcript4489.chr3.nnic@NA	transcript4489.chr3.nnic	NA	119671873	119674400	Gene ID= novel_gene_chr3_4490 TPM= 3.19 Transcript Type= NA
chr3	119821948	119824120	119821948	119824120	-	transcript4496.chr3.nnic@NA	transcript4496.chr3.nnic	NA	119821948	119824120	Gene ID= novel_gene_chr3_4497 TPM= 7.44 Transcript Type= NA
chr3	119858021	119859196	119858021	119859196	+	transcript4494.chr3.nnic@NA	transcript4494.chr3.nnic	NA	119858021	119859196	Gene ID= novel_gene_chr3_4495 TPM= 2.12 Transcript Type= NA
chr3	120394279	120451052	120394279	120451052	-	transcript4504.chr3.nic@FSTL1	transcript4504.chr3.nic	protein_coding	120450684,120415923,120411854,120410952,120409532,120404853,120403242,120402808,120399883,120394279	120451052,120416027,120411983,120410984,120409662,120404971,120403354,120402918,120399959,120396996	Gene ID= ENSG00000163430.11 TPM= 27.62 Transcript Type= NA
chr3	120421172	120450992	120421172	120450992	-	ENST00000472536.5@FSTL1	ENST00000472536.5	protein_coding	120450897,120450684,120421172	120450992,120450746,120421552	Gene ID= ENSG00000163430.11 TPM= 1.06 Transcript Type= processed_transcript
chr3	120596357	120602328	120596357	120602328	+	ENST00000491335.1@NDUFB4	ENST00000491335.1	protein_coding	120596357,120601111,120602208	120596646,120601257,120602328	Gene ID= ENSG00000065518.7 TPM= 12.21 Transcript Type= nonsense_mediated_decay
chr3	120686681	120742537	120686681	120742537	-	ENST00000273375.7@RABL3	ENST00000273375.7	protein_coding	120742462,120730696,120709780,120706000,120698423,120694153,120690449,120686681	120742537,120730787,120709909,120706114,120698573,120694224,120690487,120689888	Gene ID= ENSG00000144840.8 TPM= 6.37 Transcript Type= protein_coding
chr3	120742732	120783069	120742732	120783069	+	ENST00000283875.5@GTF2E1	ENST00000283875.5	protein_coding	120742732,120750523,120770728,120776423,120781043	120742794,120751000,120770929,120776664,120783069	Gene ID= ENSG00000153767.9 TPM= 10.62 Transcript Type= protein_coding
chr3	121597661	121598876	121597661	121598876	-	transcript4540.chr3.nnic@NA	transcript4540.chr3.nnic	NA	121597661	121598876	Gene ID= novel_gene_chr3_4541 TPM= 4.25 Transcript Type= NA
chr3	121610665	121613089	121610665	121613089	-	transcript4542.chr3.nnic@NA	transcript4542.chr3.nnic	NA	121610665	121613089	Gene ID= novel_gene_chr3_4543 TPM= 2.12 Transcript Type= NA
chr3	121627891	121630101	121627891	121630101	+	transcript4536.chr3.nnic@NA	transcript4536.chr3.nnic	NA	121627891	121630101	Gene ID= novel_gene_chr3_4537 TPM= 7.44 Transcript Type= NA
chr3	121631399	121660911	121631399	121660911	-	ENST00000314583.7@HCLS1	ENST00000314583.7	protein_coding	121660820,121658264,121657279,121647319,121644818,121642927,121637146,121636434,121635735,121634207,121633067,121632332,121632101,121631399	121660911,121658347,121657352,121647448,121644928,121642981,121637256,121636489,121635804,121634418,121633171,121632563,121632184,121631982	Gene ID= ENSG00000180353.10 TPM= 21.24 Transcript Type= protein_coding
chr3	121663199	121749755	121663199	121749755	-	ENST00000340645.9@GOLGB1	ENST00000340645.9	protein_coding	121749632,121730876,121729865,121729188,121726913,121722262,121719646,121718388,121716737,121714861,121702481,121699812,121693741,121690670,121681687,121677285,121676893,121669212,121668061,121667476,121664926,121663199	121749755,121730973,121730017,121729340,121727041,121722378,121719753,121718501,121717139,121714976,121702595,121699885,121698929,121692581,121681865,121677450,121677030,121669355,121668158,121667610,121665031,121664614	Gene ID= ENSG00000173230.15 TPM= 5.84 Transcript Type= protein_coding
chr3	121663203	121749740	121663203	121749740	-	ENST00000393667.7@GOLGB1	ENST00000393667.7	protein_coding	121749632,121730876,121729865,121729188,121726913,121722262,121719646,121718388,121716737,121714861,121702481,121699812,121693741,121690670,121681687,121677285,121676893,121669197,121668061,121667476,121664926,121663203	121749740,121730973,121730017,121729340,121727041,121722378,121719768,121718501,121717139,121714976,121702595,121699885,121698929,121692581,121681865,121677450,121677030,121669355,121668158,121667610,121665031,121664614	Gene ID= ENSG00000173230.15 TPM= 3.19 Transcript Type= protein_coding
chr3	121697397	121749620	121697397	121749620	-	transcript4552.chr3.nic@GOLGB1	transcript4552.chr3.nic	protein_coding	121749010,121730876,121729865,121729188,121726913,121722262,121719646,121718388,121716737,121714861,121702481,121699812,121697397	121749620,121730973,121730017,121729340,121727041,121722378,121719753,121718501,121717139,121714976,121702595,121699885,121698929	Gene ID= ENSG00000173230.15 TPM= 4.78 Transcript Type= NA
chr3	121663203	121749767	121663203	121749767	-	ENST00000614479.4@GOLGB1	ENST00000614479.4	protein_coding	121749632,121730848,121729865,121729188,121726913,121722262,121718388,121716737,121714861,121702481,121699812,121693741,121690670,121681687,121677285,121676893,121669212,121668061,121667476,121664926,121663203	121749767,121730973,121730017,121729340,121727041,121722378,121718501,121717139,121714976,121702595,121699885,121698929,121692581,121681865,121677450,121677030,121669355,121668158,121667610,121665031,121664614	Gene ID= ENSG00000173230.15 TPM= 3.72 Transcript Type= protein_coding
chr3	121749269	121751183	121749269	121751183	+	transcript4569.chr3.nnic@NA	transcript4569.chr3.nnic	NA	121749269	121751183	Gene ID= novel_gene_chr3_4570 TPM= 3.19 Transcript Type= NA
chr3	121769763	121835079	121769763	121835079	-	ENST00000310864.10@IQCB1	ENST00000310864.10	protein_coding	121834966,121834391,121828861,121828470,121826051,121808916,121807344,121799196,121797118,121795457,121790073,121788284,121781743,121772557,121769763	121835079,121834479,121828972,121828632,121826180,121809009,121807443,121799374,121797227,121795566,121790215,121788432,121781874,121772713,121770574	Gene ID= ENSG00000173226.16 TPM= 4.25 Transcript Type= protein_coding
chr3	121769994	121835034	121769994	121835034	-	ENST00000349820.10@IQCB1	ENST00000349820.10	protein_coding	121834966,121834391,121828861,121828470,121826051,121808916,121807344,121790073,121788284,121781743,121772557,121769994	121835034,121834479,121828972,121828632,121826180,121809009,121807443,121790215,121788432,121781874,121772713,121770574	Gene ID= ENSG00000173226.16 TPM= 1.06 Transcript Type= protein_coding
chr3	121835215	121886526	121835215	121886526	+	ENST00000273668.6@EAF2	ENST00000273668.6	protein_coding	121835215,121844453,121854687,121857011,121872537,121886342	121835391,121844547,121854823,121857156,121872788,121886526	Gene ID= ENSG00000145088.8 TPM= 2.12 Transcript Type= protein_coding
chr3	122359591	122383231	122359591	122383231	-	ENST00000291458.9@CCDC58	ENST00000291458.9	protein_coding	122383174,122371675,122368176,122362968,122359591	122383231,122371800,122368322,122363027,122359919	Gene ID= ENSG00000160124.9 TPM= 13.81 Transcript Type= protein_coding
chr3	122384206	122409999	122384206	122409999	+	transcript4591.chr3.nnic@FAM162A	transcript4591.chr3.nnic	protein_coding	122384206,122387464,122402760,122404258,122407281,122409739	122384299,122387515,122402882,122404363,122407389,122409999	Gene ID= ENSG00000114023.15 TPM= 11.68 Transcript Type= NA
chr3	122384182	122412334	122384182	122412334	+	ENST00000477892.5@FAM162A	ENST00000477892.5	protein_coding	122384182,122402760,122404258,122407281,122409739	122384299,122402882,122404363,122407389,122412334	Gene ID= ENSG00000114023.15 TPM= 19.12 Transcript Type= protein_coding
chr3	122414026	122416110	122414026	122416110	-	transcript4597.chr3.nnic@NA	transcript4597.chr3.nnic	NA	122414026	122416110	Gene ID= novel_gene_chr3_4598 TPM= 10.62 Transcript Type= NA
chr3	122424827	122514934	122424827	122514934	-	transcript4608.chr3.nic@KPNA1	transcript4608.chr3.nic	protein_coding	122514875,122496437,122467322,122463942,122461224,122453870,122451976,122451534,122449574,122442038,122437170,122433661,122427538,122424827	122514934,122496570,122467429,122464041,122461318,122454001,122452064,122451633,122449737,122442116,122437295,122433788,122427716,122427172	Gene ID= ENSG00000114030.12 TPM= 4.25 Transcript Type= NA
chr3	122425680	122514438	122425680	122514438	-	transcript4609.chr3.nnic@KPNA1	transcript4609.chr3.nnic	protein_coding	122514415,122496437,122467322,122463942,122461224,122453870,122451976,122451534,122449574,122442038,122437170,122433661,122427538,122425680	122514438,122496570,122467429,122464041,122461318,122454001,122452064,122451633,122449737,122442116,122437295,122433788,122427716,122427172	Gene ID= ENSG00000114030.12 TPM= 2.12 Transcript Type= NA
chr3	122421949	122514928	122421949	122514928	-	ENST00000344337.10@KPNA1	ENST00000344337.10	protein_coding	122514757,122496437,122467322,122463942,122461224,122453870,122451976,122451534,122449574,122442038,122437170,122433661,122427538,122421949	122514928,122496570,122467429,122464041,122461318,122454001,122452064,122451633,122449737,122442116,122437295,122433788,122427716,122427172	Gene ID= ENSG00000114030.12 TPM= 11.68 Transcript Type= protein_coding
chr3	122428456	122429467	122428456	122429467	+	transcript4619.chr3.nnic@NA	transcript4619.chr3.nnic	NA	122428456	122429467	Gene ID= novel_gene_chr3_4620 TPM= 3.19 Transcript Type= NA
chr3	122527924	122564283	122527924	122564283	-	transcript4625.chr3.nnic@PARP9	transcript4625.chr3.nnic	protein_coding	122564245,122559606,122558329,122555286,122552418,122550584,122545432,122540472,122536934,122536168,122527924	122564283,122559709,122558467,122556121,122552639,122550802,122545489,122540852,122537073,122536342,122528743	Gene ID= ENSG00000138496.16 TPM= 3.72 Transcript Type= NA
chr3	122527924	122564283	122527924	122564283	-	transcript4628.chr3.nnic@PARP9	transcript4628.chr3.nnic	protein_coding	122564245,122559606,122558434,122555286,122552418,122550584,122545432,122540472,122536934,122536168,122527924	122564283,122559709,122558467,122556121,122552639,122550802,122545489,122540852,122537073,122536342,122528743	Gene ID= ENSG00000138496.16 TPM= 10.09 Transcript Type= NA
chr3	122527959	122564577	122527959	122564577	-	ENST00000360356.6@PARP9	ENST00000360356.6	protein_coding	122564439,122559606,122558329,122555286,122552418,122550584,122545432,122540472,122536934,122536168,122527959	122564577,122559709,122558467,122556121,122552639,122550802,122545489,122540852,122537073,122536342,122528743	Gene ID= ENSG00000138496.16 TPM= 2.12 Transcript Type= protein_coding
chr3	122564238	122575203	122564238	122575203	+	ENST00000296161.8@DTX3L	ENST00000296161.8	protein_coding	122564238,122565859,122568489,122570455,122571678	122564613,122566070,122570024,122570672,122575203	Gene ID= ENSG00000163840.9 TPM= 16.99 Transcript Type= protein_coding
chr3	122680618	122730840	122680618	122730840	+	ENST00000474629.6@PARP14	ENST00000474629.6	protein_coding	122680618,122685185,122687080,122692301,122695426,122699390,122703742,122704527,122708190,122713424,122713872,122714262,122718071,122718359,122720255,122727812,122728308	122681070,122685318,122687113,122692543,122695662,122701635,122703978,122704748,122708268,122713573,122713934,122714429,122718277,122718958,122720388,122727986,122730840	Gene ID= ENSG00000173193.13 TPM= 2.12 Transcript Type= protein_coding
chr3	122712241	122730840	122712241	122730840	+	transcript4641.chr3.nic@PARP14	transcript4641.chr3.nic	protein_coding	122712241,122713872,122714262,122718071,122718359,122720255,122727812,122728308	122713573,122713934,122714429,122718277,122718958,122720388,122727986,122730840	Gene ID= ENSG00000173193.13 TPM= 4.25 Transcript Type= NA
chr3	122724646	122730840	122724646	122730840	+	transcript4643.chr3.nic@PARP14	transcript4643.chr3.nic	protein_coding	122724646,122728308	122727986,122730840	Gene ID= ENSG00000173193.13 TPM= 4.25 Transcript Type= NA
chr3	122740003	122793824	122740003	122793824	-	ENST00000306103.2@HSPBAP1	ENST00000306103.2	protein_coding	122793617,122777721,122768701,122759224,122755260,122752591,122741003,122740003	122793824,122777906,122768882,122759360,122755431,122752674,122741113,122740875	Gene ID= ENSG00000169087.10 TPM= 2.12 Transcript Type= protein_coding
chr3	122794795	122881139	122794795	122881139	+	ENST00000261038.5@DIRC2	ENST00000261038.5	protein_coding	122794795,122806857,122826800,122833317,122845763,122856307,122860075,122872415,122879263	122795535,122806950,122827065,122833446,122845871,122856374,122860202,122872597,122881139	Gene ID= ENSG00000138463.8 TPM= 8.5 Transcript Type= protein_coding
chr3	122935687	123027688	122935687	123027688	-	transcript4656.chr3.nnic@SEMA5B	transcript4656.chr3.nnic	protein_coding	123027464,122961140,122948506,122943436,122939425,122935687	123027688,122961301,122948709,122943535,122939470,122936540	Gene ID= ENSG00000082684.14 TPM= 2.12 Transcript Type= NA
chr3	122956494	122959971	122956494	122959971	+	transcript4662.chr3.nnic@NA	transcript4662.chr3.nnic	NA	122956494,122957526	122956826,122959971	Gene ID= novel_gene_chr3_4663 TPM= 2.12 Transcript Type= NA
chr3	122987850	122991079	122987850	122991079	-	transcript4666.chr3.nnic@NA	transcript4666.chr3.nnic	NA	122987850	122991079	Gene ID= novel_gene_chr3_4667 TPM= 3.19 Transcript Type= NA
chr3	123008468	123010828	123008468	123010828	+	transcript4664.chr3.nnic@NA	transcript4664.chr3.nnic	NA	123008468	123010828	Gene ID= novel_gene_chr3_4665 TPM= 12.75 Transcript Type= NA
chr3	123067070	123162104	123067070	123162104	+	ENST00000316218.11@PDIA5	ENST00000316218.11	protein_coding	123067070,123089168,123092355,123102411,123102751,123106749,123110944,123116231,123124066,123124272,123130480,123145522,123146099,123150234,123154971,123161321,123161880	123067206,123089294,123092442,123102494,123102796,123106841,123111004,123116298,123124157,123124343,123130616,123145592,123146259,123150364,123155041,123161455,123162104	Gene ID= ENSG00000065485.19 TPM= 13.81 Transcript Type= protein_coding
chr3	123283944	123448927	123283944	123448927	-	transcript4683.chr3.nic@ADCY5	transcript4683.chr3.nic	protein_coding	123447412,123352432,123347782,123332564,123330889,123328644,123327618,123325322,123320749,123319674,123318020,123314235,123304067,123303055,123300120,123297353,123296980,123296084,123291113,123289750,123286685,123283944	123448927,123352581,123347903,123332675,123331016,123328802,123327759,123325462,123320771,123319818,123318117,123314322,123304183,123303219,123300295,123297382,123297054,123296216,123291376,123289954,123286809,123284736	Gene ID= ENSG00000173175.14 TPM= 19.07 Transcript Type= NA
chr3	123283944	123449771	123283944	123449771	-	transcript4689.chr3.nnic@ADCY5	transcript4689.chr3.nnic	protein_coding	123447412,123352432,123347782,123332564,123330889,123328644,123327618,123325322,123320749,123319674,123318020,123314235,123304067,123303055,123300120,123297353,123296084,123291113,123289750,123286685,123283944	123449771,123352581,123347903,123332675,123331016,123328802,123327759,123325462,123320771,123319818,123318117,123314322,123304183,123303219,123300241,123297382,123296216,123291376,123289954,123286809,123284736	Gene ID= ENSG00000173175.14 TPM= 9.33 Transcript Type= NA
chr3	123283944	123449091	123283944	123449091	-	transcript4695.chr3.nnic@ADCY5	transcript4695.chr3.nnic	protein_coding	123447412,123352432,123347782,123332564,123330889,123328644,123327618,123325322,123320749,123319674,123318020,123314235,123303055,123300120,123297353,123296084,123291113,123289750,123286685,123283944	123449091,123352581,123347903,123332675,123331016,123328802,123327759,123325462,123320771,123319818,123318117,123314322,123303219,123300295,123297382,123296216,123291376,123289954,123286809,123284736	Gene ID= ENSG00000173175.14 TPM= 15.53 Transcript Type= NA
chr3	123283944	123335276	123283944	123335276	-	transcript4697.chr3.nnic@ADCY5	transcript4697.chr3.nnic	protein_coding	123335158,123332564,123330889,123328644,123327618,123325322,123320749,123319674,123318020,123314235,123304067,123303055,123300120,123297353,123296084,123291113,123289750,123286685,123283944	123335276,123332675,123331016,123328802,123327759,123325462,123320771,123319818,123318117,123314322,123304183,123303219,123300295,123297382,123296216,123291376,123289954,123286809,123284736	Gene ID= ENSG00000173175.14 TPM= 27.21 Transcript Type= NA
chr3	123282296	123449758	123282296	123449758	-	ENST00000462833.5@ADCY5	ENST00000462833.5	protein_coding	123447412,123352432,123347782,123332564,123330889,123328644,123327618,123325322,123320749,123319674,123318020,123314235,123304067,123303055,123300120,123297353,123296084,123291113,123289750,123286685,123282296	123449758,123352581,123347903,123332675,123331016,123328802,123327759,123325462,123320771,123319818,123318117,123314322,123304183,123303219,123300295,123297382,123296216,123291376,123289954,123286809,123284736	Gene ID= ENSG00000173175.14 TPM= 143.42 Transcript Type= protein_coding
chr3	123283942	123287243	123283942	123287243	-	transcript4725.chr3.nnic@NA	transcript4725.chr3.nnic	NA	123283942	123287243	Gene ID= novel_gene_chr3_4726 TPM= 9.56 Transcript Type= NA
chr3	123298832	123304034	123298832	123304034	-	transcript4727.chr3.nnic@NA	transcript4727.chr3.nnic	NA	123298832	123304034	Gene ID= novel_gene_chr3_4728 TPM= 11.68 Transcript Type= NA
chr3	123316067	123317764	123316067	123317764	+	transcript4713.chr3.nnic@NA	transcript4713.chr3.nnic	NA	123316067	123317764	Gene ID= novel_gene_chr3_4714 TPM= 13.81 Transcript Type= NA
chr3	123365731	123368765	123365731	123368765	+	transcript4719.chr3.nnic@NA	transcript4719.chr3.nnic	NA	123365731	123368765	Gene ID= novel_gene_chr3_4720 TPM= 4.25 Transcript Type= NA
chr3	123408702	123412827	123408702	123412827	+	transcript4715.chr3.nnic@NA	transcript4715.chr3.nnic	NA	123408702	123412827	Gene ID= novel_gene_chr3_4716 TPM= 6.37 Transcript Type= NA
chr3	123449211	123451986	123449211	123451986	+	transcript4721.chr3.nnic@NA	transcript4721.chr3.nnic	NA	123449211	123451986	Gene ID= novel_gene_chr3_4722 TPM= 4.25 Transcript Type= NA
chr3	123449924	123452623	123449924	123452623	+	transcript4729.chr3.nnic@NA	transcript4729.chr3.nnic	NA	123449924	123452623	Gene ID= novel_gene_chr3_4730 TPM= 3.19 Transcript Type= NA
chr3	123491554	123585185	123491554	123585185	-	ENST00000383657.9@HACD2	ENST00000383657.9	protein_coding	123584873,123582212,123567762,123528386,123502560,123500515,123491554	123585185,123582329,123567780,123528474,123502681,123500693,123494970	Gene ID= ENSG00000206527.9 TPM= 14.87 Transcript Type= protein_coding
chr3	123585556	123630821	123585556	123630821	+	ENST00000470449.1@MYLK-AS1	ENST00000470449.1	antisense_RNA	123585556,123629494,123630496	123585801,123629681,123630821	Gene ID= ENSG00000239523.5 TPM= 1.06 Transcript Type= antisense_RNA
chr3	123614029	123701158	123614029	123701158	-	transcript4736.chr3.nic@MYLK	transcript4736.chr3.nic	protein_coding	123700020,123692735,123682224,123667137,123666219,123664105,123657126,123649162,123648971,123647224,123640287,123638071,123629474,123626818,123620207,123618639,123614029	123701158,123692851,123682310,123667187,123666346,123664258,123657428,123649194,123649064,123647427,123640504,123638194,123629626,123626941,123620336,123618770,123614349	Gene ID= ENSG00000065534.18 TPM= 9.56 Transcript Type= NA
chr3	123612310	123625316	123612310	123625316	-	ENST00000418370.6@MYLK	ENST00000418370.6	protein_coding	123620207,123618639,123612310	123625316,123618770,123614349	Gene ID= ENSG00000065534.18 TPM= 4.25 Transcript Type= protein_coding
chr3	124032458	124032592	124032458	124032592	+	transcript4746.chr3.nnic@NA	transcript4746.chr3.nnic	NA	124032458	124032592	Gene ID= novel_gene_chr3_4747 TPM= 3.19 Transcript Type= NA
chr3	124584667	124713014	124584667	124713014	+	transcript4749.chr3.nic@KALRN	transcript4749.chr3.nic	protein_coding	124584667,124632420,124633849,124637208,124650808,124655601,124657448,124657734,124658431,124659365,124660923,124661851,124666449,124667012,124671660,124674364,124678190,124679458,124693804,124694332,124696134,124697593,124699869,124702038,124712935	124584906,124632703,124633953,124637303,124650938,124655667,124657551,124657803,124658517,124659457,124660973,124661928,124666634,124667183,124671898,124674614,124678313,124679517,124693831,124694503,124696255,124697724,124700033,124702116,124713014	Gene ID= ENSG00000160145.15 TPM= 3.9 Transcript Type= NA
chr3	124584667	124682075	124584667	124682075	+	transcript4750.chr3.nnic@KALRN	transcript4750.chr3.nnic	protein_coding	124584667,124632420,124633849,124637208,124650808,124655601,124657448,124657734,124658431,124659365,124660923,124661851,124666449,124667012,124671660,124674364,124678190,124679458,124680931,124681675	124584906,124632703,124633953,124637303,124650938,124655667,124657551,124657803,124658517,124659457,124660973,124661928,124666634,124667183,124671898,124674614,124678313,124679517,124681078,124682075	Gene ID= ENSG00000160145.15 TPM= 2.84 Transcript Type= NA
chr3	124584628	124675427	124584628	124675427	+	transcript4754.chr3.nic@KALRN	transcript4754.chr3.nic	protein_coding	124584628,124632420,124633849,124637208,124650808,124655601,124657448,124657734,124658431,124659365,124660923,124661851,124666449,124667012,124671660,124674364	124584906,124632703,124633953,124637303,124650938,124655667,124657551,124657803,124658517,124659457,124660973,124661928,124666634,124667183,124671898,124675427	Gene ID= ENSG00000160145.15 TPM= 55.94 Transcript Type= NA
chr3	124584643	124675427	124584643	124675427	+	transcript4757.chr3.nic@KALRN	transcript4757.chr3.nic	protein_coding	124584643,124632420,124633849,124650808,124655601,124657448,124657734,124658431,124659365,124660923,124661851,124666449,124667012,124671660,124674364	124584906,124632703,124633953,124650938,124655667,124657551,124657803,124658517,124659457,124660973,124661928,124666634,124667183,124671898,124675427	Gene ID= ENSG00000160145.15 TPM= 15.93 Transcript Type= NA
chr3	124033328	124395560	124033328	124395560	+	transcript4758.chr3.nnic@KALRN	transcript4758.chr3.nnic	protein_coding	124033328,124227990,124234829,124264498,124268743,124298791,124325980,124329861,124334265,124347143,124384845,124395135	124033813,124228064,124234943,124264690,124269255,124298913,124326171,124329992,124334495,124347265,124385036,124395560	Gene ID= ENSG00000160145.15 TPM= 6.37 Transcript Type= NA
chr3	124051479	124054379	124051479	124054379	+	transcript4767.chr3.nnic@NA	transcript4767.chr3.nnic	NA	124051479	124054379	Gene ID= novel_gene_chr3_4768 TPM= 3.19 Transcript Type= NA
chr3	124090163	124093763	124090163	124093763	+	transcript4769.chr3.nnic@NA	transcript4769.chr3.nnic	NA	124090163	124093763	Gene ID= novel_gene_chr3_4770 TPM= 3.19 Transcript Type= NA
chr3	124153060	124154789	124153060	124154789	-	transcript4775.chr3.nnic@NA	transcript4775.chr3.nnic	NA	124153060	124154789	Gene ID= novel_gene_chr3_4776 TPM= 2.12 Transcript Type= NA
chr3	124669965	124671000	124669965	124671000	-	transcript4771.chr3.nnic@NA	transcript4771.chr3.nnic	NA	124669965	124671000	Gene ID= novel_gene_chr3_4772 TPM= 4.25 Transcript Type= NA
chr3	124675520	124679432	124675520	124679432	-	transcript4773.chr3.nnic@NA	transcript4773.chr3.nnic	NA	124675520	124679432	Gene ID= novel_gene_chr3_4774 TPM= 11.68 Transcript Type= NA
chr3	124730445	124744757	124730445	124744757	+	ENST00000467167.5@UMPS	ENST00000467167.5	protein_coding	124730445,124731506,124735093,124737568,124740024,124742152,124743915	124730627,124731604,124735246,124738239,124740199,124742266,124744757	Gene ID= ENSG00000114491.13 TPM= 1.06 Transcript Type= nonsense_mediated_decay
chr3	124730366	124749273	124730366	124749273	+	ENST00000232607.6@UMPS	ENST00000232607.6	protein_coding	124730366,124735093,124737568,124740024,124742152,124743915	124730627,124735246,124738239,124740199,124742266,124749273	Gene ID= ENSG00000114491.13 TPM= 1.06 Transcript Type= protein_coding
chr3	124762948	124887682	124762948	124887682	-	transcript4791.chr3.nic@ITGB5	transcript4791.chr3.nic	protein_coding	124886931,124873446,124859242,124848309,124841383,124821313,124819739,124809022,124796388,124773690,124769013,124766226,124764391,124762948	124887682,124873531,124859446,124848558,124841551,124821474,124819834,124809156,124796817,124773912,124769113,124766345,124764557,124763718	Gene ID= ENSG00000082781.11 TPM= 12.57 Transcript Type= NA
chr3	124761948	124887297	124761948	124887297	-	ENST00000296181.8@ITGB5	ENST00000296181.8	protein_coding	124886931,124873446,124859242,124848309,124841383,124821313,124819739,124817621,124809022,124796388,124773690,124769013,124766226,124764391,124761948	124887297,124873531,124859446,124848558,124841551,124821474,124819834,124817710,124809156,124796817,124773912,124769113,124766345,124764557,124763718	Gene ID= ENSG00000082781.11 TPM= 12.75 Transcript Type= protein_coding
chr3	124967477	125056080	124967477	125056080	-	transcript4808.chr3.nic@HEG1	transcript4808.chr3.nic	protein_coding	125055575,125029195,125027205,125020792,125019262,125014713,125012623,125010439,125009705,125005265,125002257,125001852,124997689,124990944,124990787,124977859,124973731,124967477	125056080,125029488,125027507,125021130,125019597,125015012,125013990,125010555,125009824,125005368,125002315,125002012,124997823,124990986,124990824,124977946,124973905,124970801	Gene ID= ENSG00000173706.12 TPM= 17.53 Transcript Type= NA
chr3	125018865	125056080	125018865	125056080	-	transcript4810.chr3.nic@HEG1	transcript4810.chr3.nic	protein_coding	125055575,125029195,125027205,125020792,125018865	125056080,125029488,125027507,125021130,125019597	Gene ID= ENSG00000173706.12 TPM= 3.19 Transcript Type= NA
chr3	124965710	125055958	124965710	125055958	-	ENST00000311127.8@HEG1	ENST00000311127.8	protein_coding	125055575,125029195,125027205,125020792,125019262,125012623,125010439,125009705,125005265,125002257,125001852,124997689,124990944,124990787,124977859,124973731,124965710	125055958,125029488,125027507,125021130,125019597,125013990,125010555,125009824,125005368,125002315,125002012,124997823,124990986,124990824,124977946,124973905,124970801	Gene ID= ENSG00000173706.12 TPM= 35.58 Transcript Type= protein_coding
chr3	125232076	125357278	125232076	125357278	-	transcript4815.chr3.nnic@ZNF148	transcript4815.chr3.nnic	protein_coding	125356969,125331158,125323309,125313308,125288103,125279124,125277726,125234211,125232076	125357278,125331238,125323444,125313656,125288228,125279247,125277809,125234329,125233939	Gene ID= ENSG00000163848.19 TPM= 3.19 Transcript Type= NA
chr3	125225561	125375354	125225561	125375354	-	ENST00000360647.8@ZNF148	ENST00000360647.8	protein_coding	125375102,125331158,125323309,125313308,125288103,125279124,125277726,125234211,125225561	125375354,125331238,125323444,125313656,125288228,125279247,125277809,125234329,125233939	Gene ID= ENSG00000163848.19 TPM= 16.99 Transcript Type= protein_coding
chr3	125232076	125357276	125232076	125357276	-	transcript4819.chr3.nnic@ZNF148	transcript4819.chr3.nnic	protein_coding	125356969,125323309,125313308,125288103,125279124,125277726,125234211,125232076	125357276,125323444,125313656,125288228,125279247,125277809,125234329,125233939	Gene ID= ENSG00000163848.19 TPM= 2.12 Transcript Type= NA
chr3	125232076	125375350	125232076	125375350	-	transcript4823.chr3.nnic@ZNF148	transcript4823.chr3.nnic	protein_coding	125375102,125331158,125323309,125313308,125288103,125234211,125232076	125375350,125331238,125323444,125313656,125288228,125234329,125233939	Gene ID= ENSG00000163848.19 TPM= 2.12 Transcript Type= NA
chr3	125232079	125375251	125232079	125375251	-	ENST00000492394.5@ZNF148	ENST00000492394.5	protein_coding	125375102,125323309,125313308,125288103,125279124,125277726,125234211,125232079	125375251,125323444,125313656,125288228,125279247,125277809,125234329,125233939	Gene ID= ENSG00000163848.19 TPM= 1.06 Transcript Type= protein_coding
chr3	125446644	125520212	125446644	125520212	-	transcript4827.chr3.nnic@SNX4	transcript4827.chr3.nnic	protein_coding	125520032,125504623,125498059,125497834,125497341,125489408,125480247,125476695,125469454,125468357,125460771,125457266,125453810,125451305,125446644	125520212,125504744,125498194,125497983,125497388,125489463,125480319,125476756,125469519,125468377,125460860,125457365,125453955,125451419,125447826	Gene ID= ENSG00000114520.10 TPM= 3.19 Transcript Type= NA
chr3	125446644	125520197	125446644	125520197	-	ENST00000251775.8@SNX4	ENST00000251775.8	protein_coding	125520032,125504623,125498059,125497834,125497341,125489408,125480247,125476695,125469454,125460771,125457266,125453810,125451305,125446644	125520197,125504744,125498194,125497983,125497388,125489463,125480319,125476756,125469519,125460860,125457365,125453955,125451419,125447826	Gene ID= ENSG00000114520.10 TPM= 38.24 Transcript Type= protein_coding
chr3	125594868	125595558	125594868	125595558	-	transcript4838.chr3.nnic@NA	transcript4838.chr3.nnic	NA	125594868	125595558	Gene ID= novel_gene_chr3_4839 TPM= 2.12 Transcript Type= NA
chr3	125916630	125930024	125916630	125930024	+	ENST00000485843.1@FAM86JP	ENST00000485843.1	transcribed_unprocessed_pseudogene	125916630,125918864,125920825,125924966,125928495	125916817,125918926,125920905,125925115,125930024	Gene ID= ENSG00000171084.15 TPM= 1.06 Transcript Type= processed_transcript
chr3	125958783	125960481	125958783	125960481	+	transcript4846.chr3.nnic@NA	transcript4846.chr3.nnic	NA	125958783	125960481	Gene ID= novel_gene_chr3_4847 TPM= 6.37 Transcript Type= NA
chr3	125959390	125961759	125959390	125961759	+	transcript4848.chr3.nnic@NA	transcript4848.chr3.nnic	NA	125959390	125961759	Gene ID= novel_gene_chr3_4849 TPM= 3.19 Transcript Type= NA
chr3	125969144	125983454	125969144	125983454	+	ENST00000514116.5@ROPN1B	ENST00000514116.5	protein_coding	125969144,125971117,125972043,125975563,125977004,125982270,125983254	125969400,125971162,125972170,125975680,125977165,125982445,125983454	Gene ID= ENSG00000114547.9 TPM= 2.12 Transcript Type= protein_coding
chr3	126006358	126056838	126006358	126056838	-	ENST00000383598.6@SLC41A3	ENST00000383598.6	protein_coding	126056358,126050943,126033607,126026335,126022786,126016731,126015494,126012615,126008732,126006358	126056838,126051050,126033678,126026479,126022932,126016875,126015573,126012749,126008880,126007225	Gene ID= ENSG00000114544.16 TPM= 3.9 Transcript Type= protein_coding
chr3	126006363	126084331	126006363	126084331	-	transcript4861.chr3.nic@SLC41A3	transcript4861.chr3.nic	protein_coding	126084093,126067947,126033607,126026335,126022786,126016731,126015494,126012615,126008732,126006363	126084331,126068246,126033678,126026479,126022932,126016875,126015573,126012749,126008880,126007225	Gene ID= ENSG00000114544.16 TPM= 4.96 Transcript Type= NA
chr3	126006355	126084109	126006355	126084109	-	ENST00000360370.8@SLC41A3	ENST00000360370.8	protein_coding	126084093,126067947,126050943,126033607,126026335,126022786,126016731,126015494,126012615,126008732,126006355	126084109,126068246,126051050,126033678,126026479,126022932,126016875,126015573,126012749,126008880,126007225	Gene ID= ENSG00000114544.16 TPM= 17.71 Transcript Type= protein_coding
chr3	126103573	126180802	126103573	126180802	-	ENST00000393434.6@ALDH1L1	ENST00000393434.6	protein_coding	126180476,126160853,126158405,126157343,126155402,126154554,126153444,126150406,126146835,126137813,126136764,126135535,126131384,126130223,126125616,126124364,126118005,126114557,126112782,126109944,126107141,126105726,126103573	126180802,126161002,126158639,126157508,126155503,126154643,126153581,126150531,126146926,126137960,126136883,126135662,126131534,126130293,126125721,126124451,126118098,126114656,126112880,126110109,126107246,126105925,126103846	Gene ID= ENSG00000144908.13 TPM= 39.3 Transcript Type= protein_coding
chr3	126103571	126180890	126103571	126180890	-	transcript4868.chr3.nic@ALDH1L1	transcript4868.chr3.nic	protein_coding	126180800,126160853,126158405,126157343,126155402,126154554,126153444,126150406,126146835,126137813,126136764,126135535,126131384,126130223,126125616,126124364,126118005,126114557,126112782,126109944,126107141,126105726,126103571	126180890,126161002,126158639,126157508,126155503,126154643,126153581,126150531,126146926,126137960,126136883,126135662,126131534,126130293,126125721,126124451,126118098,126114656,126112880,126110109,126107246,126105925,126103846	Gene ID= ENSG00000144908.13 TPM= 14.34 Transcript Type= NA
chr3	126103571	126180557	126103571	126180557	-	transcript4871.chr3.nnic@ALDH1L1	transcript4871.chr3.nnic	protein_coding	126180476,126160853,126158405,126157343,126155402,126154554,126153444,126150406,126146835,126137813,126136764,126135535,126131384,126130223,126125616,126124364,126118028,126112782,126109944,126107141,126105726,126103571	126180557,126161002,126158639,126157508,126155503,126154643,126153581,126150531,126146926,126137960,126136883,126135662,126131534,126130293,126125721,126124451,126118098,126112880,126110109,126107246,126105925,126103846	Gene ID= ENSG00000144908.13 TPM= 2.66 Transcript Type= NA
chr3	126180065	126210169	126180065	126210169	+	ENST00000500232.2@ALDH1L1-AS2	ENST00000500232.2	antisense_RNA	126180065,126208326	126180544,126210169	Gene ID= ENSG00000246022.2 TPM= 6.37 Transcript Type= antisense_RNA
chr3	126458904	126475877	126458904	126475877	-	transcript4880.chr3.nic@ZXDC	transcript4880.chr3.nic	protein_coding	126474959,126472153,126471973,126470895,126466155,126461535,126458904	126475877,126472305,126472051,126471025,126466325,126462220,126459737	Gene ID= ENSG00000070476.14 TPM= 2.12 Transcript Type= NA
chr3	126463079	126475874	126463079	126475874	-	transcript4885.chr3.nic@ZXDC	transcript4885.chr3.nic	protein_coding	126474959,126472153,126471973,126470895,126463079	126475874,126472305,126472051,126471025,126466325	Gene ID= ENSG00000070476.14 TPM= 2.12 Transcript Type= NA
chr3	126437601	126443409	126437601	126443409	-	ENST00000514463.1@ZXDC	ENST00000514463.1	protein_coding	126439632,126437601	126443409,126438461	Gene ID= ENSG00000070476.14 TPM= 9.03 Transcript Type= retained_intron
chr3	126437601	126475919	126437601	126475919	-	ENST00000389709.7@ZXDC	ENST00000389709.7	protein_coding	126474959,126472153,126471973,126470895,126466155,126461535,126459653,126441765,126439632,126437601	126475919,126472305,126472051,126471025,126466325,126462220,126459737,126441946,126439727,126438461	Gene ID= ENSG00000070476.14 TPM= 26.02 Transcript Type= protein_coding
chr3	126601420	126605938	126601420	126605938	-	transcript4887.chr3.nnic@NA	transcript4887.chr3.nnic	NA	126601420	126605938	Gene ID= novel_gene_chr3_4888 TPM= 3.19 Transcript Type= NA
chr3	126704220	126960406	126704220	126960406	+	ENST00000290913.7@CHCHD6	ENST00000290913.7	protein_coding	126704220,126727078,126730561,126733078,126852647,126914680,126957416,126960196	126704399,126727186,126730630,126733222,126852730,126914750,126957551,126960406	Gene ID= ENSG00000159685.10 TPM= 15.93 Transcript Type= protein_coding
chr3	127547184	127556873	127547184	127556873	+	transcript4899.chr3.nnic@NA	transcript4899.chr3.nnic	NA	127547184,127554901	127547289,127556873	Gene ID= novel_gene_chr3_4900 TPM= 3.19 Transcript Type= NA
chr3	127573069	127590721	127573069	127590721	-	transcript4902.chr3.nnic@TPRA1	transcript4902.chr3.nnic	protein_coding	127590410,127587984,127580022,127579740,127576990,127576821,127576617,127575940,127575749,127575403,127575185,127573069	127590721,127588160,127580163,127579872,127577076,127576893,127576696,127576050,127575809,127575505,127575265,127573788	Gene ID= ENSG00000163870.14 TPM= 6.9 Transcript Type= NA
chr3	127573069	127591106	127573069	127591106	-	transcript4907.chr3.nic@TPRA1	transcript4907.chr3.nic	protein_coding	127590883,127580022,127579740,127576990,127576821,127576617,127575940,127575749,127575403,127575185,127573069	127591106,127580163,127579872,127577076,127576893,127576696,127576050,127575809,127575505,127575265,127573788	Gene ID= ENSG00000163870.14 TPM= 5.84 Transcript Type= NA
chr3	127573087	127590769	127573087	127590769	-	ENST00000355552.7@TPRA1	ENST00000355552.7	protein_coding	127590410,127580022,127579740,127576990,127576821,127576617,127575940,127575749,127575403,127575185,127573087	127590769,127580163,127579872,127577076,127576893,127576696,127576050,127575809,127575505,127575265,127573788	Gene ID= ENSG00000163870.14 TPM= 29.74 Transcript Type= protein_coding
chr3	127588420	127590726	127588420	127590726	-	transcript4922.chr3.nnic@NA	transcript4922.chr3.nnic	NA	127588420	127590726	Gene ID= novel_gene_chr3_4923 TPM= 2.12 Transcript Type= NA
chr3	127598223	127622436	127598223	127622436	+	ENST00000265056.11@MCM2	ENST00000265056.11	protein_coding	127598223,127599318,127604608,127604896,127606118,127606610,127608382,127608832,127615862,127616868,127617279,127617969,127619027,127620698,127621073,127621663	127598472,127599547,127604783,127605156,127606337,127606817,127608516,127609023,127615955,127617118,127617405,127618081,127619278,127620880,127621228,127622436	Gene ID= ENSG00000073111.13 TPM= 15.93 Transcript Type= protein_coding
chr3	127629181	127672809	127629181	127672809	+	ENST00000342480.6@PODXL2	ENST00000342480.6	protein_coding	127629181,127639245,127660378,127662237,127668441,127669141,127671434,127672268	127629289,127639523,127661159,127662311,127668597,127669202,127671613,127672809	Gene ID= ENSG00000114631.10 TPM= 11.68 Transcript Type= protein_coding
chr3	127672940	127680917	127672940	127680917	+	ENST00000232744.12@ABTB1	ENST00000232744.12	protein_coding	127672940,127674391,127674545,127675970,127676272,127676536,127676967,127677168,127677465,127677676,127679985,127680269	127673081,127674453,127674600,127676114,127676431,127676581,127677083,127677286,127677563,127677843,127680185,127680917	Gene ID= ENSG00000114626.17 TPM= 16.28 Transcript Type= protein_coding
chr3	127672937	127680917	127672937	127680917	+	transcript4935.chr3.nic@ABTB1	transcript4935.chr3.nic	protein_coding	127672937,127674391,127674545,127675970,127676272,127676536,127676967,127677465,127677676,127679985,127680269	127673081,127674453,127674600,127676114,127676431,127676581,127677286,127677563,127677843,127680185,127680917	Gene ID= ENSG00000114626.17 TPM= 3.19 Transcript Type= NA
chr3	127672937	127680917	127672937	127680917	+	transcript4938.chr3.nic@ABTB1	transcript4938.chr3.nic	protein_coding	127672937,127674391,127674545,127675970,127676536,127676967,127677465,127677676,127679985,127680269	127673081,127674453,127674600,127676431,127676581,127677286,127677563,127677843,127680185,127680917	Gene ID= ENSG00000114626.17 TPM= 3.19 Transcript Type= NA
chr3	127672958	127680920	127672958	127680920	+	ENST00000453791.6@ABTB1	ENST00000453791.6	protein_coding	127672958,127674345,127674545,127675970,127676272,127676536,127676967,127677168,127677465,127677676,127679985,127680269	127673081,127674418,127674600,127676114,127676431,127676581,127677083,127677286,127677563,127677843,127680185,127680920	Gene ID= ENSG00000114626.17 TPM= 20.53 Transcript Type= protein_coding
chr3	127672958	127680920	127672958	127680920	+	ENST00000475042.5@ABTB1	ENST00000475042.5	protein_coding	127672958,127674391,127674545,127675970,127676272,127676536,127676967,127677168,127677465,127677676,127679985,127680269	127673081,127674418,127674600,127676114,127676431,127676581,127677083,127677286,127677563,127677843,127680185,127680920	Gene ID= ENSG00000114626.17 TPM= 5.66 Transcript Type= nonsense_mediated_decay
chr3	127682895	127683054	127682895	127683054	+	transcript4943.chr3.nnic@NA	transcript4943.chr3.nnic	NA	127682895	127683054	Gene ID= novel_gene_chr3_4944 TPM= 2.12 Transcript Type= NA
chr3	127689062	127822882	127689062	127822882	-	ENST00000453507.6@MGLL	ENST00000453507.6	protein_coding	127822309,127821694,127781789,127722430,127721053,127694975,127689062	127822882,127821838,127781895,127722566,127721163,127695190,127692323	Gene ID= ENSG00000074416.13 TPM= 52.05 Transcript Type= protein_coding
chr3	127692111	127823332	127692111	127823332	-	transcript4954.chr3.nic@MGLL	transcript4954.chr3.nic	protein_coding	127823084,127821694,127781789,127722430,127721053,127694975,127692111	127823332,127821838,127781895,127722566,127721163,127695190,127692323	Gene ID= ENSG00000074416.13 TPM= 3.19 Transcript Type= NA
chr3	127689062	127823250	127689062	127823250	-	ENST00000398104.5@MGLL	ENST00000398104.5	protein_coding	127823084,127821694,127781789,127722430,127721053,127710576,127694975,127689062	127823250,127821838,127781895,127722566,127721163,127710665,127695190,127692323	Gene ID= ENSG00000074416.13 TPM= 56.29 Transcript Type= protein_coding
chr3	127915232	127987666	127915232	127987666	+	ENST00000405109.5@KBTBD12	ENST00000405109.5	protein_coding	127915232,127922950,127927764,127930133,127963189,127984097	127915586,127924131,127928034,127930283,127963386,127987666	Gene ID= ENSG00000187715.13 TPM= 43.55 Transcript Type= protein_coding
chr3	127915223	127964484	127915223	127964484	+	transcript4964.chr3.nic@KBTBD12	transcript4964.chr3.nic	protein_coding	127915223,127927764,127930133,127963189	127915586,127928034,127930283,127964484	Gene ID= ENSG00000187715.13 TPM= 2.12 Transcript Type= NA
chr3	128052369	128071682	128052369	128071682	+	ENST00000243253.7@SEC61A1	ENST00000243253.7	protein_coding	128052369,128052835,128055516,128055673,128056709,128060102,128060508,128064877,128066954,128067421,128067983,128069476	128052559,128052902,128055581,128055751,128056840,128060211,128060661,128065037,128067151,128067612,128068059,128071682	Gene ID= ENSG00000058262.9 TPM= 155.61 Transcript Type= protein_coding
chr3	128052401	128071683	128052401	128071683	+	transcript4978.chr3.nic@SEC61A1	transcript4978.chr3.nic	protein_coding	128052401,128055516,128055673,128056709,128060102,128060508,128064877,128066954,128067421,128067983,128069476	128052559,128055581,128055751,128056840,128060211,128060661,128065037,128067151,128067612,128068059,128071683	Gene ID= ENSG00000058262.9 TPM= 58.95 Transcript Type= NA
chr3	128065733	128071683	128065733	128071683	+	transcript4980.chr3.nic@SEC61A1	transcript4980.chr3.nic	protein_coding	128065733,128067421,128067983,128069476	128067151,128067612,128068059,128071683	Gene ID= ENSG00000058262.9 TPM= 76.48 Transcript Type= NA
chr3	128080960	128123824	128080960	128123824	-	ENST00000322623.9@RUVBL1	ENST00000322623.9	protein_coding	128123584,128119328,128112888,128104773,128101559,128100595,128098882,128097300,128087706,128082483,128080960	128123824,128119414,128113020,128104924,128101648,128100744,128098945,128097498,128087808,128082574,128081409	Gene ID= ENSG00000175792.11 TPM= 33.99 Transcript Type= protein_coding
chr3	128153442	128408646	128153442	128408646	+	transcript4990.chr3.nic@EEFSEC	transcript4990.chr3.nic	protein_coding	128153442,128246836,128262128,128341233,128358217,128408069	128153823,128247043,128262224,128341889,128358373,128408646	Gene ID= ENSG00000132394.10 TPM= 14.87 Transcript Type= NA
chr3	128153454	128408646	128153454	128408646	+	ENST00000254730.10@EEFSEC	ENST00000254730.10	protein_coding	128153454,128246836,128262128,128264617,128341233,128358217,128408069	128153823,128247043,128262224,128264781,128341889,128358373,128408646	Gene ID= ENSG00000132394.10 TPM= 93.47 Transcript Type= protein_coding
chr3	128170148	128171844	128170148	128171844	+	transcript4995.chr3.nnic@NA	transcript4995.chr3.nnic	NA	128170148	128171844	Gene ID= novel_gene_chr3_4996 TPM= 2.12 Transcript Type= NA
chr3	128479427	128487931	128479427	128487931	-	transcript4997.chr3.nic@GATA2	transcript4997.chr3.nic	protein_coding	128487711,128486803,128485727,128483860,128481819,128479427	128487931,128487076,128486368,128484005,128481944,128481318	Gene ID= ENSG00000179348.11 TPM= 22.31 Transcript Type= NA
chr3	128489247	128516514	128489247	128516514	+	transcript5006.chr3.nnic@GATA2-AS1	transcript5006.chr3.nnic	antisense_RNA	128489247,128489779,128515806	128489415,128490069,128516514	Gene ID= ENSG00000244300.2 TPM= 3.19 Transcript Type= NA
chr3	128489232	128502348	128489232	128502348	+	ENST00000468377.1@GATA2-AS1	ENST00000468377.1	antisense_RNA	128489232,128501609	128490069,128502348	Gene ID= ENSG00000244300.2 TPM= 2.12 Transcript Type= antisense_RNA
chr3	128619970	128650849	128619970	128650849	-	ENST00000296255.7@RPN1	ENST00000296255.7	protein_coding	128650540,128644919,128637799,128631948,128629951,128626733,128625874,128625534,128622164,128619970	128650849,128644983,128638105,128632157,128630143,128626832,128626012,128625653,128622409,128620593	Gene ID= ENSG00000163902.11 TPM= 220.93 Transcript Type= protein_coding
chr3	128726122	128814796	128726122	128814796	+	ENST00000265062.7@RAB7A	ENST00000265062.7	protein_coding	128726122,128795360,128797943,128806372,128807543,128813327	128726359,128795420,128798069,128806590,128807671,128814796	Gene ID= ENSG00000075785.12 TPM= 276.16 Transcript Type= protein_coding
chr3	128743794	128746202	128743794	128746202	-	transcript5033.chr3.nnic@NA	transcript5033.chr3.nnic	NA	128743794	128746202	Gene ID= novel_gene_chr3_5034 TPM= 2.12 Transcript Type= NA
chr3	128879611	128913114	128879611	128913114	+	ENST00000308982.11@ACAD9	ENST00000308982.11	protein_coding	128879611,128884653,128893555,128895310,128896436,128897632,128899287,128901276,128902553,128904062,128904386,128906121,128908185,128908973,128909344,128910021,128910741,128912507	128879841,128884746,128893656,128895416,128896536,128897710,128899461,128901349,128902628,128904132,128904505,128906249,128908264,128909099,128909421,128910149,128910813,128913114	Gene ID= ENSG00000177646.18 TPM= 25.49 Transcript Type= protein_coding
chr3	128880550	128882459	128880550	128882459	-	transcript5043.chr3.nnic@NA	transcript5043.chr3.nnic	NA	128880550	128882459	Gene ID= novel_gene_chr3_5044 TPM= 5.31 Transcript Type= NA
chr3	129001582	129040116	129001582	129040116	+	transcript5046.chr3.nnic@EFCC1	transcript5046.chr3.nnic	protein_coding	129001582,129003794,129030703,129032819,129034164,129036977,129038831,129039712	129002324,129004077,129030860,129032966,129034329,129037117,129038900,129040116	Gene ID= ENSG00000114654.7 TPM= 2.12 Transcript Type= NA
chr3	129060767	129062406	129060767	129062406	+	ENST00000307395.4@GP9	ENST00000307395.4	protein_coding	129060767,129061494,129061728	129060850,129061619,129062406	Gene ID= ENSG00000169704.4 TPM= 1.06 Transcript Type= protein_coding
chr3	129087569	129121790	129087569	129121790	-	ENST00000315150.9@RAB43	ENST00000315150.9	protein_coding	129121286,129094986,129087569	129121790,129095169,129091346	Gene ID= ENSG00000172780.16 TPM= 15.93 Transcript Type= protein_coding
chr3	129164842	129165525	129164842	129165525	+	transcript5092.chr3.nnic@NA	transcript5092.chr3.nnic	NA	129164842	129165525	Gene ID= novel_gene_chr3_5093 TPM= 3.19 Transcript Type= NA
chr3	129167816	129170179	129167816	129170179	-	transcript5094.chr3.nnic@NA	transcript5094.chr3.nnic	NA	129167816	129170179	Gene ID= novel_gene_chr3_5095 TPM= 6.37 Transcript Type= NA
chr3	129168117	129168627	129168117	129168627	+	transcript5090.chr3.nnic@NA	transcript5090.chr3.nnic	NA	129168117	129168627	Gene ID= novel_gene_chr3_5091 TPM= 19.12 Transcript Type= NA
chr3	129169484	129183905	129169484	129183905	-	ENST00000502976.5@CNBP	ENST00000502976.5	protein_coding	129183776,129171655,129171446,129171079,129169484	129183905,129171771,129171538,129171277,129170570	Gene ID= ENSG00000169714.16 TPM= 138.08 Transcript Type= protein_coding
chr3	129169487	129183899	129169487	129183899	-	ENST00000446936.6@CNBP	ENST00000446936.6	protein_coding	129183776,129171655,129171446,129171079,129169487	129183899,129171771,129171538,129171283,129170570	Gene ID= ENSG00000169714.16 TPM= 10.62 Transcript Type= protein_coding
chr3	129169569	129183922	129169569	129183922	-	ENST00000504813.5@CNBP	ENST00000504813.5	protein_coding	129183776,129171634,129171446,129171079,129169569	129183922,129171771,129171508,129171277,129170570	Gene ID= ENSG00000169714.16 TPM= 313.34 Transcript Type= protein_coding
chr3	129200398	129202751	129200398	129202751	+	transcript5099.chr3.nnic@NA	transcript5099.chr3.nnic	NA	129200398	129202751	Gene ID= novel_gene_chr3_5100 TPM= 2.12 Transcript Type= NA
chr3	129249606	129277773	129249606	129277773	+	ENST00000314797.10@COPG1	ENST00000314797.10	protein_coding	129249606,129250682,129252281,129252623,129252876,129254668,129254985,129256068,129257470,129257727,129260333,129260619,129263904,129265549,129267024,129267937,129268495,129268932,129271767,129272244,129272807,129274838,129275194,129277294	129249746,129250734,129252361,129252694,129252955,129254743,129255077,129256154,129257627,129257860,129260400,129260807,129263999,129265792,129267099,129268040,129268620,129269000,129271909,129272415,129272904,129274976,129275292,129277773	Gene ID= ENSG00000181789.14 TPM= 238.37 Transcript Type= protein_coding
chr3	129278840	129306186	129278840	129306186	+	ENST00000383463.8@HMCES	ENST00000383463.8	protein_coding	129278840,129279710,129288854,129290679,129298354,129301950,129304589	129278905,129279915,129288997,129290804,129298535,129302142,129306186	Gene ID= ENSG00000183624.13 TPM= 30.8 Transcript Type= protein_coding
chr3	129278846	129305293	129278846	129305293	+	ENST00000417226.6@HMCES	ENST00000417226.6	protein_coding	129278846,129279710,129288854,129298354,129301950,129304589	129278905,129279915,129288997,129298535,129302142,129305293	Gene ID= ENSG00000183624.13 TPM= 3.72 Transcript Type= protein_coding
chr3	129278974	129305262	129278974	129305262	+	ENST00000389735.7@HMCES	ENST00000389735.7	protein_coding	129278974,129279710,129288854,129290679,129298354,129301950,129304589	129279211,129279915,129288997,129290804,129298535,129302142,129305262	Gene ID= ENSG00000183624.13 TPM= 16.46 Transcript Type= protein_coding
chr3	129314771	129316277	129314771	129316277	-	ENST00000333762.5@H1FX	ENST00000333762.5	protein_coding	129314771	129316277	Gene ID= ENSG00000184897.5 TPM= 50.98 Transcript Type= protein_coding
chr3	129316377	129318670	129316377	129318670	+	transcript5131.chr3.nnic@NA	transcript5131.chr3.nnic	NA	129316377	129318670	Gene ID= novel_gene_chr3_5132 TPM= 2.12 Transcript Type= NA
chr3	129361645	129363542	129361645	129363542	-	transcript5135.chr3.nnic@NA	transcript5135.chr3.nnic	NA	129361645	129363542	Gene ID= novel_gene_chr3_5136 TPM= 2.12 Transcript Type= NA
chr3	129370458	129371789	129370458	129371789	+	transcript5137.chr3.nnic@NA	transcript5137.chr3.nnic	NA	129370458	129371789	Gene ID= novel_gene_chr3_5138 TPM= 2.12 Transcript Type= NA
chr3	129401321	129428651	129401321	129428651	-	ENST00000505956.5@EFCAB12	ENST00000505956.5	protein_coding	129428440,129421367,129418254,129415245,129411158,129408645,129404250,129402523,129401321	129428651,129421803,129418448,129415401,129411354,129408858,129404403,129402579,129401851	Gene ID= ENSG00000172771.11 TPM= 1.06 Transcript Type= protein_coding
chr3	129430952	129440179	129430952	129440179	-	ENST00000393278.6@MBD4	ENST00000393278.6	protein_coding	129439730,129437808,129434062,129433850,129433098,129432503,129430952	129440179,129437950,129434136,129433984,129433247,129432606,129431578	Gene ID= ENSG00000129071.9 TPM= 1.41 Transcript Type= protein_coding
chr3	129432176	129440035	129432176	129440035	-	ENST00000507208.1@MBD4	ENST00000507208.1	protein_coding	129439730,129437720,129436443,129434062,129433850,129433098,129432176	129440035,129437950,129437308,129434136,129433984,129433247,129432606	Gene ID= ENSG00000129071.9 TPM= 5.31 Transcript Type= protein_coding
chr3	129430944	129440029	129430944	129440029	-	ENST00000429544.6@MBD4	ENST00000429544.6	protein_coding	129439730,129437720,129436461,129434062,129433850,129433098,129432503,129430944	129440029,129437950,129437308,129434136,129433984,129433247,129432606,129431578	Gene ID= ENSG00000129071.9 TPM= 4.6 Transcript Type= protein_coding
chr3	129430950	129440009	129430950	129440009	-	ENST00000249910.5@MBD4	ENST00000249910.5	protein_coding	129439730,129437720,129436443,129434062,129433850,129433098,129432503,129430950	129440009,129437950,129437308,129434136,129433984,129433247,129432606,129431578	Gene ID= ENSG00000129071.9 TPM= 1.41 Transcript Type= protein_coding
chr3	129440138	129520345	129440138	129520345	+	transcript5141.chr3.nic@IFT122	transcript5141.chr3.nic	protein_coding	129440138,129449871,129451914,129458599,129461228,129463560,129464635,129469342,129476315,129476663,129478016,129479785,129481530,129483485,129488257,129492141,129495446,129499902,129502711,129504319,129506409,129507665,129512312,129514389,129515488,129517469,129519107,129519568,129520176	129440371,129449937,129451998,129458677,129461304,129463626,129464781,129469417,129476506,129476801,129478218,129479922,129481694,129483682,129488397,129492194,129495607,129500068,129502882,129504421,129506549,129507762,129512412,129514554,129515599,129517594,129519186,129519732,129520345	Gene ID= ENSG00000163913.11 TPM= 2.12 Transcript Type= NA
chr3	129440125	129520351	129440125	129520351	+	ENST00000347300.6@IFT122	ENST00000347300.6	protein_coding	129440125,129449871,129451914,129458599,129461228,129463560,129464635,129469342,129476315,129476663,129478016,129479785,129481530,129483485,129488257,129492141,129495446,129499902,129502711,129504319,129506409,129507668,129512312,129514389,129515488,129517469,129519107,129519568,129520176	129440371,129449937,129451998,129458677,129461304,129463626,129464781,129469417,129476506,129476801,129478218,129479922,129481694,129483682,129488397,129492194,129495607,129500068,129502882,129504421,129506549,129507762,129512412,129514554,129515599,129517594,129519186,129519732,129520351	Gene ID= ENSG00000163913.11 TPM= 7.44 Transcript Type= protein_coding
chr3	129440244	129520351	129440244	129520351	+	ENST00000349441.6@IFT122	ENST00000349441.6	protein_coding	129440244,129449871,129451914,129463560,129464635,129469342,129476315,129476663,129478016,129479785,129481530,129483485,129488257,129492141,129495446,129499902,129502711,129504319,129506409,129507665,129512312,129514389,129515488,129517469,129519107,129519568,129520176	129440371,129449937,129451998,129463626,129464781,129469417,129476506,129476801,129478218,129479922,129481694,129483682,129488397,129492194,129495607,129500068,129502882,129504421,129506549,129507762,129512412,129514554,129515599,129517594,129519186,129519732,129520351	Gene ID= ENSG00000163913.11 TPM= 3.19 Transcript Type= protein_coding
chr3	129555214	129558697	129555214	129558697	-	ENST00000504524.5@PLXND1	ENST00000504524.5	protein_coding	129558428,129557083,129556617,129555214	129558697,129557223,129556691,129556428	Gene ID= ENSG00000004399.12 TPM= 18.06 Transcript Type= retained_intron
chr3	129650557	129893551	129650557	129893551	-	transcript5159.chr3.nnic@TMCC1	transcript5159.chr3.nnic	protein_coding	129893494,129880309,129838898,129832774,129827803,129670330,129654968,129650557	129893551,129880559,129839060,129832826,129828077,129671264,129655103,129651795	Gene ID= ENSG00000172765.16 TPM= 2.12 Transcript Type= NA
chr3	129647794	129893576	129647794	129893576	-	ENST00000426664.6@TMCC1	ENST00000426664.6	protein_coding	129893494,129832774,129827803,129670330,129654968,129647794	129893576,129832826,129828077,129671264,129655103,129651795	Gene ID= ENSG00000172765.16 TPM= 7.44 Transcript Type= protein_coding
chr3	129647792	129688732	129647792	129688732	-	ENST00000432054.6@TMCC1	ENST00000432054.6	protein_coding	129688177,129670330,129654968,129647792	129688732,129671264,129655103,129651795	Gene ID= ENSG00000172765.16 TPM= 7.44 Transcript Type= protein_coding
chr3	129873392	129875514	129873392	129875514	+	transcript5170.chr3.nnic@NA	transcript5170.chr3.nnic	NA	129873392	129875514	Gene ID= novel_gene_chr3_5171 TPM= 6.37 Transcript Type= NA
chr3	129893871	129908911	129893871	129908911	+	ENST00000605830.5@TMCC1-AS1	ENST00000605830.5	antisense_RNA	129893871,129901707,129905627	129893927,129901860,129908911	Gene ID= ENSG00000271270.5 TPM= 1.06 Transcript Type= antisense_RNA
chr3	130678935	130746829	130678935	130746829	-	ENST00000356763.7@PIK3R4	ENST00000356763.7	protein_coding	130746318,130744486,130735869,130733548,130730308,130728463,130723414,130718389,130716396,130708291,130706948,130705561,130703723,130690490,130686211,130684250,130681491,130680977,130680613,130678935	130746829,130745264,130736002,130734130,130730442,130728684,130723587,130718534,130716599,130708492,130707135,130705771,130703888,130690654,130686422,130684381,130681591,130681065,130680721,130679485	Gene ID= ENSG00000196455.7 TPM= 7.44 Transcript Type= protein_coding
chr3	130893962	131016684	130893962	131016684	+	transcript5176.chr3.nic@ATP2C1	transcript5176.chr3.nic	protein_coding	130893962,130894590,130930416,130932022,130934622,130937428,130940630,130941591,130953821,130955012,130956104,130959275,130963971,130964948,130967145,130967330,130969292,130975332,130979249,130980582,130992951,130993932,130996043,130996680,130997606,130998294,130999518,131001220,131016152	130894337,130894775,130930526,130932138,130934711,130937463,130940691,130941699,130953976,130955080,130956179,130959341,130964095,130965045,130967240,130967419,130969396,130975488,130979419,130980679,130993001,130994098,130996111,130996796,130997753,130998389,130999659,131001344,131016684	Gene ID= ENSG00000017260.19 TPM= 3.72 Transcript Type= NA
chr3	130850592	131016684	130850592	131016684	+	transcript5179.chr3.nic@ATP2C1	transcript5179.chr3.nic	protein_coding	130850592,130930416,130932022,130934622,130937428,130940630,130941591,130953821,130955012,130956104,130959275,130963971,130964948,130967145,130967330,130969292,130975332,130979249,130980582,130992951,130993932,130996043,130996680,130997606,130998294,130999518,131001220,131016152	130850928,130930526,130932138,130934711,130937463,130940691,130941699,130953976,130955080,130956179,130959341,130964095,130965045,130967240,130967419,130969396,130975488,130979419,130980679,130993001,130994098,130996111,130996796,130997753,130998389,130999659,131001344,131016684	Gene ID= ENSG00000017260.19 TPM= 5.84 Transcript Type= NA
chr3	130893991	131003150	130893991	131003150	+	ENST00000508532.5@ATP2C1	ENST00000508532.5	protein_coding	130893991,130894708,130930416,130932022,130934622,130937428,130940630,130941591,130953821,130955012,130956104,130959275,130963971,130964948,130967145,130967330,130969292,130975332,130979249,130980582,130992951,130993932,130996043,130996680,130997606,130998294,130999518,131001220	130894337,130894775,130930526,130932138,130934711,130937463,130940691,130941699,130953976,130955080,130956179,130959341,130964095,130965045,130967240,130967419,130969396,130975488,130979419,130980679,130993001,130994098,130996111,130996796,130997753,130998389,130999659,131003150	Gene ID= ENSG00000017260.19 TPM= 2.66 Transcript Type= protein_coding
chr3	130850610	130962744	130850610	130962744	+	transcript5197.chr3.nic@ATP2C1	transcript5197.chr3.nic	protein_coding	130850610,130930416,130932022,130934622,130937428,130940630,130941591,130953821,130955012,130956104,130959275	130850928,130930526,130932138,130934711,130937463,130940691,130941699,130953976,130955080,130956179,130962744	Gene ID= ENSG00000017260.19 TPM= 2.12 Transcript Type= NA
chr3	130850601	131016684	130850601	131016684	+	ENST00000507488.6@ATP2C1	ENST00000507488.6	protein_coding	130850601,130930416,130932022,130934622,130937428,130940630,130941591,130953821,130955012,130956104,130959275,130963971,130964948,130967145,130967330,130969292,130975332,130979249,130980582,130992951,130993932,130996043,130996680,130997606,130998294,130999518,131001220,131016152	130850928,130930526,130932138,130934711,130937463,130940691,130941699,130953976,130955080,130956179,130959341,130964095,130965045,130967240,130967419,130969396,130975488,130979419,130980679,130993001,130994098,130996111,130996796,130997753,130998389,130999659,131001314,131016684	Gene ID= ENSG00000017260.19 TPM= 11.68 Transcript Type= protein_coding
chr3	130850595	131003150	130850595	131003150	+	ENST00000505330.5@ATP2C1	ENST00000505330.5	protein_coding	130850595,130930416,130932022,130934622,130937428,130940630,130941591,130953821,130955012,130956104,130959275,130963971,130964948,130967145,130967330,130969292,130975332,130979249,130980582,130992951,130993932,130996043,130996680,130997606,130998294,130999518,131001220	130850928,130930526,130932138,130934711,130937463,130940691,130941699,130953976,130955080,130956179,130959341,130964095,130965045,130967240,130967419,130969396,130975488,130979419,130980679,130993001,130994098,130996111,130996796,130997753,130998389,130999659,131003150	Gene ID= ENSG00000017260.19 TPM= 1.59 Transcript Type= protein_coding
chr3	130893968	131003107	130893968	131003107	+	ENST00000510168.5@ATP2C1	ENST00000510168.5	protein_coding	130893968,130894590,130930416,130932022,130934622,130937428,130940630,130941591,130953821,130955012,130956104,130959275,130963971,130964948,130967145,130967330,130969292,130975332,130979249,130980582,130992951,130993932,130996043,130996680,130997606,130998294,130999518,131001220	130894337,130894775,130930526,130932138,130934711,130937463,130940691,130941699,130953976,130955080,130956179,130959341,130964095,130965045,130967240,130967419,130969396,130975488,130979419,130980679,130993001,130994098,130996111,130996796,130997753,130998389,130999659,131003107	Gene ID= ENSG00000017260.19 TPM= 1.06 Transcript Type= protein_coding
chr3	130894641	131016669	130894641	131016669	+	ENST00000359644.7@ATP2C1	ENST00000359644.7	protein_coding	130894641,130930416,130932022,130934622,130937428,130940630,130941591,130953821,130955012,130956104,130959275,130963971,130964948,130967145,130967330,130969292,130975332,130979249,130980582,130992951,130993932,130996043,130996680,130997606,130998294,130999518,131001220,131016152	130894775,130930526,130932138,130934711,130937463,130940691,130941699,130953976,130955080,130956179,130959341,130964095,130965045,130967240,130967419,130969396,130975488,130979419,130980679,130993001,130994098,130996111,130996796,130997753,130998389,130999659,131001344,131016669	Gene ID= ENSG00000017260.19 TPM= 1.06 Transcript Type= protein_coding
chr3	131010189	131011744	131010189	131011744	-	transcript5203.chr3.nnic@NA	transcript5203.chr3.nnic	NA	131010189	131011744	Gene ID= novel_gene_chr3_5204 TPM= 2.12 Transcript Type= NA
chr3	131013875	131026802	131013875	131026802	-	ENST00000264992.7@ASTE1	ENST00000264992.7	protein_coding	131026507,131025474,131024005,131018506,131016144,131013875	131026802,131025594,131025331,131018716,131016339,131014387	Gene ID= ENSG00000034533.11 TPM= 5.31 Transcript Type= protein_coding
chr3	131324220	131327756	131324220	131327756	+	transcript5209.chr3.nnic@NA	transcript5209.chr3.nnic	NA	131324220	131327756	Gene ID= novel_gene_chr3_5210 TPM= 8.5 Transcript Type= NA
chr3	131327558	131361653	131327558	131361653	-	transcript5208.chr3.nnic@AC010210.1	transcript5208.chr3.nnic	processed_transcript	131361566,131327558	131361653,131327730	Gene ID= ENSG00000250608.1 TPM= 2.12 Transcript Type= NA
chr3	131361898	131365122	131361898	131365122	+	ENST00000499077.2@NUDT16P1	ENST00000499077.2	transcribed_unitary_pseudogene	131361898,131362172,131363356	131362068,131362441,131365122	Gene ID= ENSG00000246082.2 TPM= 3.19 Transcript Type= processed_transcript
chr3	131361912	131364531	131361912	131364531	+	ENST00000498923.2@NUDT16P1	ENST00000498923.2	transcribed_unitary_pseudogene	131361912,131363356	131362441,131364531	Gene ID= ENSG00000246082.2 TPM= 4.25 Transcript Type= retained_intron
chr3	131381774	131388830	131381774	131388830	+	ENST00000521288.1@NUDT16	ENST00000521288.1	protein_coding	131381774,131382046,131383162	131381942,131382315,131388830	Gene ID= ENSG00000198585.11 TPM= 24.43 Transcript Type= protein_coding
chr3	131462212	131502969	131462212	131502969	-	ENST00000264995.7@MRPL3	ENST00000264995.7	protein_coding	131502730,131501531,131500430,131498179,131489981,131487680,131471171,131469696,131468091,131462212	131502969,131501715,131500521,131498277,131490080,131487740,131471279,131469773,131468168,131462875	Gene ID= ENSG00000114686.8 TPM= 23.37 Transcript Type= protein_coding
chr3	131484673	131486389	131484673	131486389	+	transcript5236.chr3.nnic@NA	transcript5236.chr3.nnic	NA	131484673	131486389	Gene ID= novel_gene_chr3_5237 TPM= 8.5 Transcript Type= NA
chr3	131534737	131804628	131534737	131804628	-	transcript5241.chr3.nnic@CPNE4	transcript5241.chr3.nnic	protein_coding	131804558,131723446,131699909,131696542,131685875,131669675,131587484,131581579,131575071,131564216,131555497,131552440,131549947,131542557,131534737	131804628,131723625,131699980,131696616,131685958,131669764,131587582,131581665,131575130,131564349,131555551,131552491,131550080,131542793,131535329	Gene ID= ENSG00000196353.11 TPM= 2.12 Transcript Type= NA
chr3	132506543	132508797	132506543	132508797	-	transcript5244.chr3.nnic@NA	transcript5244.chr3.nnic	NA	132506543	132508797	Gene ID= novel_gene_chr3_5245 TPM= 9.56 Transcript Type= NA
chr3	132417526	132539032	132417526	132539032	+	ENST00000260818.10@DNAJC13	ENST00000260818.10	protein_coding	132417526,132434538,132446475,132447321,132447898,132450647,132453298,132453599,132454066,132456235,132456501,132456663,132457269,132460250,132461050,132462467,132463696,132465995,132466299,132467170,132473145,132474932,132477789,132477981,132479227,132480369,132482226,132483375,132484588,132488298,132488976,132490897,132492414,132494144,132495088,132496528,132499126,132499734,132500794,132502289,132503214,132505302,132507237,132511067,132513008,132514571,132516422,132516704,132522828,132523157,132523540,132525610,132526141,132528189,132530998,132538176	132417760,132434618,132446550,132447470,132447939,132450847,132453504,132453694,132454157,132456401,132456580,132456832,132457368,132460357,132461205,132462523,132463817,132466070,132466394,132467313,132473227,132475085,132477892,132478140,132479289,132480470,132482330,132483577,132484672,132488452,132489021,132491051,132492615,132494259,132495166,132496663,132499310,132499808,132500913,132502468,132503381,132505415,132507353,132511244,132513099,132514670,132516496,132516816,132522997,132523199,132523713,132525789,132526281,132528332,132531097,132539032	Gene ID= ENSG00000138246.15 TPM= 4.25 Transcript Type= protein_coding
chr3	132558144	132660723	132558144	132660723	-	ENST00000264990.10@ACAD11	ENST00000264990.10	protein_coding	132659603,132644797,132642677,132641972,132639492,132631341,132630437,132628340,132626691,132619468,132618634,132605098,132603229,132579492,132578796,132576944,132575772,132561101,132559833,132558144	132660723,132644896,132642802,132642133,132639656,132631479,132630558,132628446,132626817,132619545,132618772,132605205,132603327,132579558,132578881,132577015,132575926,132561217,132559942,132559085	Gene ID= ENSG00000240303.7 TPM= 41.42 Transcript Type= protein_coding
chr3	132597237	132602215	132597237	132602215	+	ENST00000249887.2@ACKR4	ENST00000249887.2	protein_coding	132597237,132600389	132597323,132602215	Gene ID= ENSG00000129048.6 TPM= 4.25 Transcript Type= protein_coding
chr3	132659466	132677944	132659466	132677944	+	ENST00000356232.8@UBA5	ENST00000356232.8	protein_coding	132659466,132665823,132665984,132668818,132670198,132670965,132671777,132672050,132675248,132675605,132675817,132676443	132660698,132665868,132666073,132668927,132670284,132671049,132671881,132672177,132675383,132675680,132675923,132677944	Gene ID= ENSG00000081307.12 TPM= 11.68 Transcript Type= protein_coding
chr3	132660334	132678041	132660334	132678041	+	transcript5269.chr3.nic@UBA5	transcript5269.chr3.nic	protein_coding	132660334,132668818,132670198,132670965,132671777,132672050,132675248,132675605,132675817,132676443	132660698,132668927,132670284,132671049,132671881,132672177,132675383,132675680,132675923,132678041	Gene ID= ENSG00000081307.12 TPM= 2.12 Transcript Type= NA
chr3	132670169	132674532	132670169	132674532	+	transcript5273.chr3.nnic@NA	transcript5273.chr3.nnic	NA	132670169	132674532	Gene ID= novel_gene_chr3_5274 TPM= 2.12 Transcript Type= NA
chr3	132717753	132722514	132717753	132722514	-	transcript5282.chr3.nic@NPHP3-ACAD11	transcript5282.chr3.nic	protein_coding	132721963,132719705,132717753	132722514,132719830,132719144	Gene ID= ENSG00000274810.4 TPM= 2.12 Transcript Type= NA
chr3	132721445	132722414	132721445	132722414	-	ENST00000383282.3@NPHP3	ENST00000383282.3	protein_coding	132721963,132721445	132722414,132721774	Gene ID= ENSG00000113971.19 TPM= 1.06 Transcript Type= protein_coding
chr3	133573551	133590258	133573551	133590258	+	transcript5290.chr3.nic@CDV3	transcript5290.chr3.nic	protein_coding	133573551,133575039,133584002,133586563,133588353	133574284,133575115,133584150,133586722,133590258	Gene ID= ENSG00000091527.15 TPM= 42.14 Transcript Type= NA
chr3	133573730	133590261	133573730	133590261	+	ENST00000264993.7@CDV3	ENST00000264993.7	protein_coding	133573730,133575039,133584002,133586563,133587896	133574284,133575115,133584150,133586722,133590261	Gene ID= ENSG00000091527.15 TPM= 37.36 Transcript Type= protein_coding
chr3	133574457	133590260	133574457	133590260	+	ENST00000420115.6@CDV3	ENST00000420115.6	protein_coding	133574457,133575039,133584002,133586563,133587162	133574592,133575115,133584150,133586722,133590260	Gene ID= ENSG00000091527.15 TPM= 12.93 Transcript Type= protein_coding
chr3	133784033	133821492	133784033	133821492	+	ENST00000466490.6@SRPRB	ENST00000466490.6	protein_coding	133784033,133805676,133806609,133807746,133811117,133815590,133816878,133819553	133784144,133806002,133806703,133807823,133811199,133815726,133816932,133821492	Gene ID= ENSG00000144867.11 TPM= 7.44 Transcript Type= protein_coding
chr3	133826715	133828643	133826715	133828643	-	transcript5308.chr3.nnic@NA	transcript5308.chr3.nnic	NA	133826715	133828643	Gene ID= novel_gene_chr3_5309 TPM= 5.31 Transcript Type= NA
chr3	133925025	133927774	133925025	133927774	-	transcript5310.chr3.nnic@NA	transcript5310.chr3.nnic	NA	133925025	133927774	Gene ID= novel_gene_chr3_5311 TPM= 2.12 Transcript Type= NA
chr3	133928145	133929812	133928145	133929812	-	ENST00000408895.3@C3orf36	ENST00000408895.3	protein_coding	133928145	133929812	Gene ID= ENSG00000221972.3 TPM= 1.06 Transcript Type= protein_coding
chr3	133932696	134030076	133932696	134030076	-	ENST00000310926.8@SLCO2A1	ENST00000310926.8	protein_coding	134029707,133979481,133973663,133954966,133953663,133951208,133948893,133948536,133947256,133945095,133942605,133938429,133935774,133932696	134030076,133979618,133973825,133955193,133953761,133951344,133948971,133948700,133947445,133945260,133942768,133938493,133935897,133934830	Gene ID= ENSG00000174640.12 TPM= 96.13 Transcript Type= protein_coding
chr3	133949818	134029929	133949818	134029929	-	transcript5316.chr3.nic@SLCO2A1	transcript5316.chr3.nic	protein_coding	134029707,133979481,133973663,133954966,133953663,133949818	134029929,133979618,133973825,133955193,133953761,133951344	Gene ID= ENSG00000174640.12 TPM= 2.66 Transcript Type= NA
chr3	134157133	134250884	134157133	134250884	-	transcript5321.chr3.nnic@RYK	transcript5321.chr3.nnic	protein_coding	134250693,134250423,134222418,134211508,134209695,134207472,134202730,134195082,134191849,134188837,134183002,134177941,134175930,134175609,134159237,134157133	134250884,134250583,134222539,134211607,134209829,134207525,134202874,134195182,134191983,134188923,134183071,134178073,134176039,134175768,134159373,134158264	Gene ID= ENSG00000163785.12 TPM= 4.49 Transcript Type= NA
chr3	134157136	134250842	134157136	134250842	-	transcript5326.chr3.nnic@RYK	transcript5326.chr3.nnic	protein_coding	134250423,134222418,134211508,134209695,134207472,134202730,134195082,134191849,134188837,134183002,134177941,134175930,134175609,134159237,134157136	134250842,134222539,134211607,134209829,134207525,134202874,134195182,134191983,134188923,134183071,134178073,134176039,134175768,134159373,134158275	Gene ID= ENSG00000163785.12 TPM= 2.47 Transcript Type= NA
chr3	134157133	134211934	134157133	134211934	-	transcript5331.chr3.nnic@RYK	transcript5331.chr3.nnic	protein_coding	134211854,134211508,134209695,134207472,134202730,134195082,134191849,134188837,134183002,134177941,134175930,134175609,134159237,134157133	134211934,134211607,134209829,134207525,134202874,134195182,134191974,134188923,134183071,134178073,134176039,134175768,134159373,134158264	Gene ID= ENSG00000163785.12 TPM= 3.96 Transcript Type= NA
chr3	134157133	134250903	134157133	134250903	-	transcript5336.chr3.nnic@RYK	transcript5336.chr3.nnic	protein_coding	134250423,134222418,134211508,134202730,134195082,134191849,134188837,134183002,134177941,134175930,134175609,134159237,134157133	134250903,134222539,134211607,134202874,134195182,134191983,134188923,134183071,134178073,134176039,134175768,134159373,134158264	Gene ID= ENSG00000163785.12 TPM= 2.9 Transcript Type= NA
chr3	134157133	134250744	134157133	134250744	-	ENST00000623711.3@RYK	ENST00000623711.3	protein_coding	134250423,134222418,134211508,134209695,134207472,134202730,134195082,134191849,134188837,134183002,134177941,134175930,134175609,134159237,134157133	134250744,134222539,134211607,134209829,134207525,134202874,134195182,134191974,134188923,134183071,134178073,134176039,134175768,134159373,134158264	Gene ID= ENSG00000163785.12 TPM= 2.9 Transcript Type= protein_coding
chr3	134347412	134349951	134347412	134349951	-	transcript5346.chr3.nnic@NA	transcript5346.chr3.nnic	NA	134347412	134349951	Gene ID= novel_gene_chr3_5347 TPM= 2.12 Transcript Type= NA
chr3	134355874	134374594	134355874	134374594	-	ENST00000249883.9@AMOTL2	ENST00000249883.9	protein_coding	134374342,134370700,134367497,134366283,134365817,134361512,134360106,134359283,134358540,134355874	134374594,134371494,134367803,134366427,134365909,134361807,134360413,134359503,134358719,134357763	Gene ID= ENSG00000114019.14 TPM= 48.86 Transcript Type= protein_coding
chr3	134355877	134374447	134355877	134374447	-	ENST00000422605.6@AMOTL2	ENST00000422605.6	protein_coding	134374342,134370700,134367497,134366283,134365817,134361512,134360106,134359283,134358540,134355877	134374447,134371494,134367803,134366427,134365909,134361807,134360413,134359503,134358716,134357763	Gene ID= ENSG00000114019.14 TPM= 18.06 Transcript Type= protein_coding
chr3	134477706	134486023	134477706	134486023	-	ENST00000510994.5@ANAPC13	ENST00000510994.5	protein_coding	134485320,134482806,134477706	134486023,134482931,134478715	Gene ID= ENSG00000129055.12 TPM= 28.5 Transcript Type= protein_coding
chr3	134477708	134486026	134477708	134486026	-	ENST00000354910.9@ANAPC13	ENST00000354910.9	protein_coding	134485952,134482806,134477708	134486026,134482931,134478715	Gene ID= ENSG00000129055.12 TPM= 112.94 Transcript Type= protein_coding
chr3	134477711	134485989	134477711	134485989	-	ENST00000514612.5@ANAPC13	ENST00000514612.5	protein_coding	134485701,134482806,134477711	134485989,134482931,134478715	Gene ID= ENSG00000129055.12 TPM= 6.19 Transcript Type= protein_coding
chr3	134485716	134561766	134485716	134561766	+	transcript5360.chr3.nic@CEP63	transcript5360.chr3.nic	protein_coding	134485716,134495296,134507109,134531845,134532778,134537155,134545586,134546149,134547335,134549062,134550063,134551926,134561377	134486052,134495364,134507286,134531940,134532900,134537268,134545819,134546288,134547472,134549176,134550260,134552012,134561766	Gene ID= ENSG00000182923.16 TPM= 8.5 Transcript Type= NA
chr3	134486045	134561766	134486045	134561766	+	transcript5366.chr3.nic@CEP63	transcript5366.chr3.nic	protein_coding	134486045,134495296,134507109,134531845,134532778,134537155,134545586,134546149,134549062,134550063,134551926,134561377	134486202,134495364,134507286,134531940,134532900,134537268,134545819,134546288,134549176,134550260,134552012,134561766	Gene ID= ENSG00000182923.16 TPM= 6.37 Transcript Type= NA
chr3	134486045	134561766	134486045	134561766	+	transcript5367.chr3.nic@CEP63	transcript5367.chr3.nic	protein_coding	134486045,134495296,134507109,134531845,134532778,134537155,134545586,134546149,134549062,134550063,134551926,134561377	134486556,134495364,134507286,134531940,134532900,134537268,134545819,134546288,134549176,134550260,134552012,134561766	Gene ID= ENSG00000182923.16 TPM= 8.5 Transcript Type= NA
chr3	134485743	134561768	134485743	134561768	+	ENST00000332047.9@CEP63	ENST00000332047.9	protein_coding	134485743,134495296,134507109,134531845,134532778,134537155,134545586,134546149,134549062,134550063,134551926,134561377	134486052,134495364,134507286,134531940,134532900,134537268,134545819,134546288,134549176,134550260,134552012,134561768	Gene ID= ENSG00000182923.16 TPM= 15.93 Transcript Type= protein_coding
chr3	134485791	134575011	134485791	134575011	+	ENST00000354446.7@CEP63	ENST00000354446.7	protein_coding	134485791,134495296,134507109,134531845,134532778,134537155,134545586,134546149,134549062,134550063,134551926,134574793	134486052,134495364,134507286,134531940,134532900,134537268,134545819,134546288,134549176,134550260,134552012,134575011	Gene ID= ENSG00000182923.16 TPM= 4.25 Transcript Type= protein_coding
chr3	134538200	134542711	134538200	134542711	-	transcript5388.chr3.nnic@NA	transcript5388.chr3.nnic	NA	134538200	134542711	Gene ID= novel_gene_chr3_5389 TPM= 9.56 Transcript Type= NA
chr3	134599923	134602637	134599923	134602637	-	transcript5390.chr3.nnic@NA	transcript5390.chr3.nnic	NA	134599923	134602637	Gene ID= novel_gene_chr3_5391 TPM= 2.12 Transcript Type= NA
chr3	135965673	136147891	135965673	136147891	+	ENST00000264977.7@PPP2R3A	ENST00000264977.7	protein_coding	135965673,136001059,136026832,136040859,136049259,136070478,136078367,136082265,136087883,136090578,136102007,136103258,136106216,136145043	135965849,136003493,136027098,136040962,136049361,136070552,136078453,136082421,136087931,136090667,136102182,136103376,136106322,136147891	Gene ID= ENSG00000073711.10 TPM= 18.06 Transcript Type= protein_coding
chr3	136043250	136046466	136043250	136046466	+	transcript5405.chr3.nnic@NA	transcript5405.chr3.nnic	NA	136043250	136046466	Gene ID= novel_gene_chr3_5406 TPM= 2.12 Transcript Type= NA
chr3	136250339	136332589	136250339	136332589	+	transcript5412.chr3.nnic@PCCB	transcript5412.chr3.nnic	protein_coding	136250339,136255856,136256555,136260479,136261952,136283837,136293756,136297952,136301030,136316941,136326803,136327155,136327634,136328758,136329905,136332040	136250558,136255975,136256623,136260535,136262065,136283947,136293864,136298072,136301111,136317064,136326910,136327255,136327732,136328857,136331336,136332589	Gene ID= ENSG00000114054.13 TPM= 8.03 Transcript Type= NA
chr3	136250306	136330169	136250306	136330169	+	ENST00000251654.8@PCCB	ENST00000251654.8	protein_coding	136250306,136255856,136256555,136260479,136261952,136283837,136293756,136297952,136301030,136316941,136326803,136327155,136327634,136328758,136329905	136250558,136255975,136256623,136260535,136262065,136283947,136293864,136298072,136301111,136317064,136326910,136327255,136327732,136328857,136330169	Gene ID= ENSG00000114054.13 TPM= 181.03 Transcript Type= protein_coding
chr3	136250355	136330169	136250355	136330169	+	ENST00000466072.5@PCCB	ENST00000466072.5	protein_coding	136250355,136255856,136256555,136260479,136261952,136283837,136293756,136297952,136301030,136316941,136326326,136326803,136327155,136327634,136328758,136329905	136250558,136255975,136256623,136260535,136262065,136283947,136293864,136298072,136301111,136317064,136326385,136326910,136327255,136327732,136328857,136330169	Gene ID= ENSG00000114054.13 TPM= 5.39 Transcript Type= protein_coding
chr3	136250355	136330169	136250355	136330169	+	ENST00000484181.5@PCCB	ENST00000484181.5	protein_coding	136250355,136255856,136256555,136260479,136261952,136283837,136293756,136297952,136301030,136316941,136326803,136327634,136328758,136329905	136250558,136255975,136256623,136260535,136262065,136283947,136293864,136298072,136301111,136317064,136326910,136327732,136328857,136330169	Gene ID= ENSG00000114054.13 TPM= 2.98 Transcript Type= nonsense_mediated_decay
chr3	136250355	136330169	136250355	136330169	+	ENST00000462637.5@PCCB	ENST00000462637.5	protein_coding	136250355,136255856,136260479,136261952,136283837,136293756,136297952,136301030,136316941,136326803,136327155,136327634,136328758,136329905	136250558,136255975,136260535,136262065,136283947,136293864,136298072,136301111,136317064,136326910,136327255,136327732,136328857,136330169	Gene ID= ENSG00000114054.13 TPM= 7.31 Transcript Type= protein_coding
chr3	136250355	136330169	136250355	136330169	+	ENST00000490504.5@PCCB	ENST00000490504.5	protein_coding	136250355,136255856,136256555,136283837,136293756,136297952,136301030,136316941,136326803,136327155,136327634,136328758,136329905	136250558,136255975,136256623,136283947,136293864,136298072,136301111,136317064,136326910,136327255,136327732,136328857,136330169	Gene ID= ENSG00000114054.13 TPM= 6.51 Transcript Type= protein_coding
chr3	136250359	136330170	136250359	136330170	+	ENST00000469217.5@PCCB	ENST00000469217.5	protein_coding	136250359,136255856,136256555,136259176,136260479,136261952,136283837,136293756,136297952,136301030,136316941,136326803,136327155,136327634,136328758,136329905	136250558,136255975,136256623,136259235,136260535,136262065,136283947,136293864,136298072,136301111,136317064,136326910,136327255,136327732,136328857,136330170	Gene ID= ENSG00000114054.13 TPM= 11.74 Transcript Type= protein_coding
chr3	136336233	136752368	136336233	136752368	-	ENST00000383202.6@STAG1	ENST00000383202.6	protein_coding	136752195,136630870,136623146,136604309,136568765,136542119,136521213,136502628,136500223,136477289,136473539,136472413,136464881,136452033,136443287,136433556,136422952,136422768,136422410,136421093,136417885,136398749,136377660,136369108,136366943,136363366,136359148,136357720,136349158,136343832,136341441,136340491,136338370,136336233	136752368,136630981,136623248,136604473,136568861,136542195,136521417,136502779,136500296,136477412,136473637,136472492,136464988,136452147,136443404,136433659,136423044,136422857,136422613,136421163,136417972,136398829,136377752,136369282,136367082,136363467,136359296,136357848,136349363,136344006,136341551,136340605,136338450,136338277	Gene ID= ENSG00000118007.12 TPM= 10.62 Transcript Type= protein_coding
chr3	136819022	136855885	136819022	136855885	+	transcript5441.chr3.nnic@SLC35G2	transcript5441.chr3.nnic	protein_coding	136819022,136854443	136819363,136855885	Gene ID= ENSG00000168917.8 TPM= 2.12 Transcript Type= NA
chr3	136819019	136855892	136819019	136855892	+	ENST00000446465.2@SLC35G2	ENST00000446465.2	protein_coding	136819019,136854443	136819628,136855892	Gene ID= ENSG00000168917.8 TPM= 4.25 Transcript Type= protein_coding
chr3	136841726	136862037	136841726	136862037	-	ENST00000461864.5@NCK1-AS1	ENST00000461864.5	antisense_RNA	136861747,136846528,136841726	136862037,136846586,136842569	Gene ID= ENSG00000239213.5 TPM= 1.06 Transcript Type= antisense_RNA
chr3	136862211	136950193	136862211	136950193	+	transcript5444.chr3.nic@NCK1	transcript5444.chr3.nic	protein_coding	136862211,136867431,136927984,136945583,136948259	136862319,136867525,136928227,136946295,136950193	Gene ID= ENSG00000158092.6 TPM= 2.12 Transcript Type= NA
chr3	136862208	136949126	136862208	136949126	+	ENST00000288986.6@NCK1	ENST00000288986.6	protein_coding	136862208,136927984,136945583,136948259	136862319,136928227,136946295,136949126	Gene ID= ENSG00000158092.6 TPM= 9.56 Transcript Type= protein_coding
chr3	136862208	136949126	136862208	136949126	+	ENST00000481752.5@NCK1	ENST00000481752.5	protein_coding	136862208,136927984,136945583,136948259	136862353,136928227,136946295,136949126	Gene ID= ENSG00000158092.6 TPM= 2.12 Transcript Type= protein_coding
chr3	136930470	136949823	136930470	136949823	+	ENST00000469404.1@NCK1	ENST00000469404.1	protein_coding	136930470,136945583,136948259	136930594,136946295,136949823	Gene ID= ENSG00000158092.6 TPM= 1.06 Transcript Type= protein_coding
chr3	136874188	136876535	136874188	136876535	-	transcript5451.chr3.nnic@NA	transcript5451.chr3.nnic	NA	136874188	136876535	Gene ID= novel_gene_chr3_5452 TPM= 2.12 Transcript Type= NA
chr3	138161012	138174949	138161012	138174949	-	ENST00000260803.8@DBR1	ENST00000260803.8	protein_coding	138174599,138173502,138171633,138170107,138167081,138163778,138163349,138161012	138174949,138173626,138171713,138170192,138167305,138163858,138163494,138162582	Gene ID= ENSG00000138231.12 TPM= 3.19 Transcript Type= protein_coding
chr3	138187267	138296549	138187267	138296549	+	ENST00000481646.5@ARMC8	ENST00000481646.5	protein_coding	138187267,138188455,138209817,138221926,138223389,138223636,138228918,138235034,138237309,138237482,138239468,138241783,138245088,138263739,138264131,138267155,138270040,138272967,138274449,138284431,138289048,138290546,138295859	138187599,138188530,138209893,138221997,138223531,138223733,138229010,138235114,138237384,138237572,138239528,138241983,138245183,138263821,138264212,138267241,138270132,138273116,138274544,138284526,138289120,138290639,138296549	Gene ID= ENSG00000114098.17 TPM= 1.06 Transcript Type= protein_coding
chr3	138187284	138298389	138187284	138298389	+	ENST00000469044.5@ARMC8	ENST00000469044.5	protein_coding	138187284,138209817,138221926,138223389,138223636,138228918,138235034,138237309,138237482,138239468,138241783,138245088,138263739,138264131,138267155,138270040,138272967,138274449,138284431,138289048,138290546,138295859	138187599,138209893,138221997,138223531,138223733,138229010,138235114,138237384,138237572,138239528,138241983,138245183,138263821,138264212,138267241,138270132,138273116,138274544,138284526,138289120,138290639,138298389	Gene ID= ENSG00000114098.17 TPM= 14.87 Transcript Type= protein_coding
chr3	138187327	138296549	138187327	138296549	+	transcript5466.chr3.nic@ARMC8	transcript5466.chr3.nic	protein_coding	138187327,138221926,138223389,138223636,138228918,138235034,138237309,138237482,138239468,138241783,138245088,138263739,138264131,138267155,138270040,138272967,138274449,138284431,138289048,138290546,138295859	138187599,138221997,138223531,138223733,138229010,138235114,138237384,138237572,138239528,138241983,138245183,138263821,138264212,138267241,138270132,138273116,138274544,138284526,138289120,138290639,138296549	Gene ID= ENSG00000114098.17 TPM= 3.19 Transcript Type= NA
chr3	138187531	138245681	138187531	138245681	+	ENST00000470821.5@ARMC8	ENST00000470821.5	protein_coding	138187531,138209817,138221926,138223389,138223636,138228918,138235034,138237309,138237482,138239468,138241783,138245088	138187599,138209893,138221997,138223531,138223733,138229010,138235114,138237384,138237572,138239528,138241983,138245681	Gene ID= ENSG00000114098.17 TPM= 4.25 Transcript Type= protein_coding
chr3	138347697	138405533	138347697	138405533	+	ENST00000289104.8@MRAS	ENST00000289104.8	protein_coding	138347697,138372866,138397324,138398469,138400534,138402170	138348325,138373076,138397477,138398568,138400613,138405533	Gene ID= ENSG00000158186.12 TPM= 33.11 Transcript Type= protein_coding
chr3	138348579	138405533	138348579	138405533	+	transcript5492.chr3.nic@MRAS	transcript5492.chr3.nic	protein_coding	138348579,138372866,138397324,138398469,138400534,138402170	138349032,138373076,138397477,138398568,138400613,138405533	Gene ID= ENSG00000158186.12 TPM= 45.85 Transcript Type= NA
chr3	138348579	138400614	138348579	138400614	+	transcript5495.chr3.nic@MRAS	transcript5495.chr3.nic	protein_coding	138348579,138372866,138397324,138398469,138400534	138348767,138373076,138397477,138398568,138400614	Gene ID= ENSG00000158186.12 TPM= 27.62 Transcript Type= NA
chr3	138348581	138350964	138348581	138350964	+	transcript5507.chr3.nnic@MRAS	transcript5507.chr3.nnic	protein_coding	138348581,138349684	138348767,138350964	Gene ID= ENSG00000158186.12 TPM= 4.25 Transcript Type= NA
chr3	138348472	138403131	138348472	138403131	+	ENST00000423968.6@MRAS	ENST00000423968.6	protein_coding	138348472,138372866,138397324,138398469,138400534,138402170	138348767,138373076,138397477,138398568,138400613,138403131	Gene ID= ENSG00000158186.12 TPM= 50.8 Transcript Type= protein_coding
chr3	138494344	138594356	138494344	138594356	-	ENST00000264982.7@CEP70	ENST00000264982.7	protein_coding	138594198,138591854,138572859,138571266,138571034,138570318,138537178,138532514,138529375,138529199,138525490,138508439,138505295,138500735,138500399,138500110,138498031,138494344	138594356,138591956,138572932,138571356,138571157,138570498,138537347,138532570,138529462,138529287,138525564,138508544,138505465,138500881,138500567,138500224,138498110,138495076	Gene ID= ENSG00000114107.8 TPM= 6.37 Transcript Type= protein_coding
chr3	138499884	138594248	138499884	138594248	-	ENST00000481834.5@CEP70	ENST00000481834.5	protein_coding	138594198,138591854,138572859,138571266,138571034,138570318,138537178,138532514,138529375,138529199,138525490,138508439,138505295,138500735,138500399,138499884	138594248,138591956,138572932,138571356,138571157,138570498,138537347,138532570,138529462,138529287,138525564,138508544,138505465,138500881,138500567,138500224	Gene ID= ENSG00000114107.8 TPM= 5.31 Transcript Type= protein_coding
chr3	138608851	138633376	138608851	138633376	+	ENST00000393035.6@FAIM	ENST00000393035.6	protein_coding	138608851,138621407,138622188,138629107,138632930	138608937,138621539,138622416,138629156,138633376	Gene ID= ENSG00000158234.12 TPM= 1.06 Transcript Type= protein_coding
chr3	138609072	138633369	138609072	138633369	+	ENST00000393034.6@FAIM	ENST00000393034.6	protein_coding	138609072,138621407,138622188,138629107,138632930	138609146,138621539,138622416,138629156,138633369	Gene ID= ENSG00000158234.12 TPM= 1.06 Transcript Type= protein_coding
chr3	138654020	138834957	138654020	138834957	-	transcript5531.chr3.nic@PIK3CB	transcript5531.chr3.nic	protein_coding	138834695,138796463,138759173,138755754,138742558,138737707,138734634,138733361,138714468,138712208,138707159,138704443,138698907,138694786,138691000,138688875,138684625,138683678,138681967,138665036,138663906,138657690,138656142,138654020	138834957,138796567,138759359,138755979,138742781,138737886,138734804,138733438,138714719,138712304,138707289,138704493,138699095,138694907,138691143,138688974,138684803,138683787,138682045,138665203,138664029,138657835,138656274,138655526	Gene ID= ENSG00000051382.8 TPM= 14.87 Transcript Type= NA
chr3	138654068	138834917	138654068	138834917	-	ENST00000462898.5@PIK3CB	ENST00000462898.5	protein_coding	138834695,138759173,138755754,138742558,138737707,138734634,138733361,138714468,138712208,138707159,138704443,138698907,138694786,138691000,138688875,138684625,138683678,138681967,138665036,138663906,138657690,138656142,138654068	138834917,138759359,138755979,138742755,138737886,138734804,138733438,138714719,138712304,138707289,138704493,138699095,138694907,138691143,138688974,138684803,138683787,138682045,138665203,138664029,138657835,138656274,138655526	Gene ID= ENSG00000051382.8 TPM= 3.19 Transcript Type= nonsense_mediated_decay
chr3	138739785	138741841	138739785	138741841	+	transcript5536.chr3.nnic@NA	transcript5536.chr3.nnic	NA	138739785	138741841	Gene ID= novel_gene_chr3_5537 TPM= 2.12 Transcript Type= NA
chr3	139005806	139357046	139005806	139357046	+	ENST00000495075.5@MRPS22	ENST00000495075.5	protein_coding	139005806,139180290,139343956,139346878,139348160,139350179,139350977,139352647,139355682,139356919	139006095,139180360,139344198,139347044,139348324,139350322,139351060,139352792,139355790,139357046	Gene ID= ENSG00000175110.11 TPM= 91.35 Transcript Type= protein_coding
chr3	139343994	139357046	139343994	139357046	+	transcript5558.chr3.nic@MRPS22	transcript5558.chr3.nic	protein_coding	139343994,139346878,139348160,139350179,139351031,139352647,139355682,139356919	139344198,139347044,139348324,139350322,139351060,139352792,139355790,139357046	Gene ID= ENSG00000175110.11 TPM= 4.78 Transcript Type= NA
chr3	139344027	139357051	139344027	139357051	+	ENST00000480938.5@MRPS22	ENST00000480938.5	protein_coding	139344027,139346878,139348160,139350179,139352647,139355682,139356919	139344198,139347044,139348324,139351060,139352792,139355790,139357051	Gene ID= ENSG00000175110.11 TPM= 2.66 Transcript Type= retained_intron
chr3	139344027	139357033	139344027	139357033	+	ENST00000465056.5@MRPS22	ENST00000465056.5	protein_coding	139344027,139346881,139348160,139350179,139350977,139352647,139355682,139356919	139344198,139347044,139348324,139350322,139351060,139352792,139355790,139357033	Gene ID= ENSG00000175110.11 TPM= 2.12 Transcript Type= protein_coding
chr3	139344565	139357014	139344565	139357014	+	ENST00000478464.5@MRPS22	ENST00000478464.5	protein_coding	139344565,139346878,139348160,139350179,139350977,139352647,139355682,139356919	139344718,139347044,139348324,139350322,139351060,139352792,139355790,139357014	Gene ID= ENSG00000175110.11 TPM= 1.06 Transcript Type= protein_coding
chr3	139357593	139389693	139357593	139389693	-	transcript5540.chr3.nic@COPB2	transcript5540.chr3.nic	protein_coding	139389548,139385004,139383298,139379380,139379047,139378041,139375468,139374489,139373666,139373213,139371723,139369456,139369261,139368145,139367015,139366568,139362407,139361081,139359270,139358998,139358744,139358200,139357593	139389693,139385200,139383435,139379466,139379173,139378189,139375614,139374588,139373808,139373412,139371833,139369544,139369367,139368288,139367145,139366775,139362517,139361295,139359362,139359178,139358812,139358271,139357958	Gene ID= ENSG00000184432.9 TPM= 4.51 Transcript Type= NA
chr3	139357406	139389732	139357406	139389732	-	ENST00000333188.9@COPB2	ENST00000333188.9	protein_coding	139389548,139383298,139379380,139379047,139378041,139375468,139374489,139373666,139373213,139371723,139369456,139369261,139368145,139367015,139366568,139362407,139361081,139359270,139358998,139358744,139358200,139357406	139389732,139383435,139379466,139379173,139378189,139375614,139374588,139373808,139373412,139371833,139369544,139369367,139368288,139367145,139366775,139362517,139361295,139359362,139359178,139358812,139358271,139357958	Gene ID= ENSG00000184432.9 TPM= 6.64 Transcript Type= protein_coding
chr3	139357593	139389676	139357593	139389676	-	ENST00000507777.5@COPB2	ENST00000507777.5	protein_coding	139389631,139383298,139379380,139379047,139378041,139375468,139374489,139373666,139373213,139371723,139369456,139369261,139368145,139367015,139366568,139362407,139361081,139359270,139358998,139358744,139358200,139357593	139389676,139383435,139379466,139379173,139378189,139375614,139374588,139373808,139373412,139371833,139369544,139369367,139368288,139367145,139366775,139362517,139361295,139359362,139359178,139358812,139358271,139357958	Gene ID= ENSG00000184432.9 TPM= 31.07 Transcript Type= protein_coding
chr3	139389800	139444604	139389800	139444604	+	transcript5571.chr3.nic@AC097103.2	transcript5571.chr3.nic	antisense_RNA	139389800,139419557,139423016,139444294	139389933,139419680,139423114,139444604	Gene ID= ENSG00000248932.5 TPM= 2.12 Transcript Type= NA
chr3	139458310	139459633	139458310	139459633	+	transcript5578.chr3.nnic@NA	transcript5578.chr3.nnic	NA	139458310	139459633	Gene ID= novel_gene_chr3_5579 TPM= 2.12 Transcript Type= NA
chr3	139517434	139539829	139517434	139539829	-	ENST00000232219.6@RBP1	ENST00000232219.6	protein_coding	139539460,139538781,139518421,139517434	139539829,139538959,139518522,139517680	Gene ID= ENSG00000114115.9 TPM= 2.12 Transcript Type= protein_coding
chr3	139525699	139539688	139525699	139539688	-	ENST00000487424.2@RBP1	ENST00000487424.2	protein_coding	139539460,139538321,139525699	139539688,139538959,139525902	Gene ID= ENSG00000114115.9 TPM= 1.06 Transcript Type= nonsense_mediated_decay
chr3	140941813	140979939	140941813	140979939	+	transcript5586.chr3.nnic@SLC25A36	transcript5586.chr3.nnic	protein_coding	140941813,140954988,140956527,140959463,140963127,140966934,140970927,140973716,140976260	140942095,140955029,140956691,140959540,140963227,140967036,140970993,140974005,140979939	Gene ID= ENSG00000114120.11 TPM= 14.34 Transcript Type= NA
chr3	140941813	140979939	140941813	140979939	+	transcript5592.chr3.nnic@SLC25A36	transcript5592.chr3.nnic	protein_coding	140941813,140954988,140956527,140959463,140963127,140970927,140973716,140976260	140942095,140955029,140956691,140959540,140963227,140970993,140974005,140979939	Gene ID= ENSG00000114120.11 TPM= 15.4 Transcript Type= NA
chr3	140941887	140976650	140941887	140976650	+	ENST00000324194.10@SLC25A36	ENST00000324194.10	protein_coding	140941887,140956527,140959463,140963127,140970927,140973716,140976260	140942095,140956691,140959540,140963227,140970993,140974005,140976650	Gene ID= ENSG00000114120.11 TPM= 5.66 Transcript Type= protein_coding
chr3	140941895	140976483	140941895	140976483	+	ENST00000502594.5@SLC25A36	ENST00000502594.5	protein_coding	140941895,140956527,140959463,140963127,140967000,140970927,140973716,140976260	140942095,140956691,140959540,140963227,140967036,140970993,140974005,140976483	Gene ID= ENSG00000114120.11 TPM= 1.41 Transcript Type= nonsense_mediated_decay
chr3	141051402	141148611	141051402	141148611	+	ENST00000310546.2@SPSB4	ENST00000310546.2	protein_coding	141051402,141065952,141147142	141051992,141066798,141148611	Gene ID= ENSG00000175093.4 TPM= 21.24 Transcript Type= protein_coding
chr3	141242194	141294323	141242194	141294323	+	transcript5623.chr3.nnic@PXYLP1	transcript5623.chr3.nnic	protein_coding	141242194,141260123,141278342,141279378,141287314,141292268	141242416,141260254,141278500,141279504,141287453,141294323	Gene ID= ENSG00000155893.12 TPM= 3.19 Transcript Type= NA
chr3	141231828	141294906	141231828	141294906	+	ENST00000286353.8@PXYLP1	ENST00000286353.8	protein_coding	141231828,141260123,141278342,141279378,141287314,141292268	141231911,141260254,141278500,141279504,141287453,141294906	Gene ID= ENSG00000155893.12 TPM= 1.06 Transcript Type= protein_coding
chr3	141249472	141252704	141249472	141252704	-	transcript5633.chr3.nnic@NA	transcript5633.chr3.nnic	NA	141249472	141252704	Gene ID= novel_gene_chr3_5634 TPM= 3.19 Transcript Type= NA
chr3	141309933	141312920	141309933	141312920	-	transcript5635.chr3.nnic@NA	transcript5635.chr3.nnic	NA	141309933	141312920	Gene ID= novel_gene_chr3_5636 TPM= 2.12 Transcript Type= NA
chr3	141402359	141446097	141402359	141446097	+	transcript5650.chr3.nic@ZBTB38	transcript5650.chr3.nic	protein_coding	141402359,141403927,141438268,141442389	141402449,141404031,141438365,141446097	Gene ID= ENSG00000177311.11 TPM= 9.56 Transcript Type= NA
chr3	141446828	141448623	141446828	141448623	+	transcript5666.chr3.nnic@NA	transcript5666.chr3.nnic	NA	141446828	141448623	Gene ID= novel_gene_chr3_5667 TPM= 3.19 Transcript Type= NA
chr3	141553429	141554663	141553429	141554663	-	transcript5674.chr3.nnic@NA	transcript5674.chr3.nnic	NA	141553429	141554663	Gene ID= novel_gene_chr3_5675 TPM= 2.12 Transcript Type= NA
chr3	141738204	141747560	141738204	141747560	+	ENST00000273480.3@RNF7	ENST00000273480.3	protein_coding	141738204,141743509,141745159	141738516,141743556,141747560	Gene ID= ENSG00000114125.13 TPM= 130.65 Transcript Type= protein_coding
chr3	141738297	141745702	141738297	141745702	+	ENST00000393000.3@RNF7	ENST00000393000.3	protein_coding	141738297,141743509,141745159	141738509,141743556,141745702	Gene ID= ENSG00000114125.13 TPM= 124.8 Transcript Type= protein_coding
chr3	141738277	141745700	141738277	141745700	+	ENST00000480908.1@RNF7	ENST00000480908.1	protein_coding	141738277,141745159	141738516,141745700	Gene ID= ENSG00000114125.13 TPM= 3.72 Transcript Type= protein_coding
chr3	141876616	141926514	141876616	141926514	+	ENST00000465172.5@ATP1B3	ENST00000465172.5	protein_coding	141876616,141902136,141903620,141907167,141913652,141915970,141916555,141921977,141925531	141876910,141902227,141903748,141907274,141913836,141916020,141916574,141922063,141926514	Gene ID= ENSG00000069849.10 TPM= 2.47 Transcript Type= nonsense_mediated_decay
chr3	141876614	141926484	141876614	141926484	+	ENST00000286371.7@ATP1B3	ENST00000286371.7	protein_coding	141876614,141903620,141907167,141913652,141915970,141921977,141925531	141876910,141903748,141907274,141913836,141916020,141922063,141926484	Gene ID= ENSG00000069849.10 TPM= 4.6 Transcript Type= protein_coding
chr3	141923797	141926193	141923797	141926193	+	transcript5693.chr3.nnic@NA	transcript5693.chr3.nnic	NA	141923797	141926193	Gene ID= novel_gene_chr3_5694 TPM= 2.47 Transcript Type= NA
chr3	141951502	142149544	141951502	142149544	-	transcript5703.chr3.nic@TFDP2	transcript5703.chr3.nic	protein_coding	142149183,142101735,142005441,141995020,141993538,141978520,141974048,141970073,141963812,141959674,141952911,141951502	142149544,142101841,142005544,141995141,141993585,141978682,141974191,141970141,141963963,141959840,141953016,141952696	Gene ID= ENSG00000114126.17 TPM= 2.12 Transcript Type= NA
chr3	141951502	142028665	141951502	142028665	-	ENST00000486111.5@TFDP2	ENST00000486111.5	protein_coding	142028579,142005441,141995020,141993538,141978520,141974048,141970073,141963812,141959674,141952911,141951502	142028665,142005544,141995141,141993585,141978682,141974194,141970141,141963963,141959840,141953016,141952696	Gene ID= ENSG00000114126.17 TPM= 10.62 Transcript Type= protein_coding
chr3	141974105	142149524	141974105	142149524	-	transcript5719.chr3.nic@TFDP2	transcript5719.chr3.nic	protein_coding	142149183,142101735,142093061,142005441,141995020,141993538,141978520,141974105	142149524,142101841,142093127,142005544,141995141,141993585,141978682,141974191	Gene ID= ENSG00000114126.17 TPM= 2.12 Transcript Type= NA
chr3	142201177	142225620	142201177	142225620	-	transcript5731.chr3.nnic@GK5	transcript5731.chr3.nnic	protein_coding	142225309,142215599,142213526,142204695,142201177	142225620,142215692,142213601,142204788,142201599	Gene ID= ENSG00000175066.15 TPM= 3.19 Transcript Type= NA
chr3	142163909	142225548	142163909	142225548	-	ENST00000480757.5@GK5	ENST00000480757.5	protein_coding	142225309,142215599,142213526,142204695,142198802,142187704,142186452,142186194,142185929,142184711,142182923,142181461,142177482,142172353,142171419,142170325,142163909	142225548,142215692,142213601,142204788,142198933,142187779,142186513,142186267,142185989,142185793,142183049,142181565,142177576,142172456,142171478,142170458,142165770	Gene ID= ENSG00000175066.15 TPM= 1.06 Transcript Type= nonsense_mediated_decay
chr3	142306607	142448062	142306607	142448062	-	ENST00000264951.8@XRN1	ENST00000264951.8	protein_coding	142447870,142432661,142426744,142425429,142425222,142423560,142422835,142422582,142421476,142421016,142418815,142418504,142417140,142414135,142412544,142404907,142403869,142403674,142400444,142397329,142384523,142383300,142380082,142376479,142375798,142371239,142370485,142365310,142365047,142359862,142356912,142355401,142347234,142335448,142332967,142332375,142329434,142318790,142318592,142313136,142312598,142306607	142448062,142432893,142426841,142425538,142425332,142423642,142422922,142422750,142421543,142421153,142418881,142418609,142417229,142414291,142412663,142405076,142403989,142403772,142400547,142397460,142384685,142383413,142380180,142376594,142375944,142371328,142370620,142365366,142365179,142359931,142357119,142355496,142347342,142335509,142333089,142332531,142329615,142318903,142318694,142313174,142312758,142311813	Gene ID= ENSG00000114127.10 TPM= 1.06 Transcript Type= protein_coding
chr3	142449237	142578826	142449237	142578826	-	ENST00000350721.8@ATR	ENST00000350721.8	protein_coding	142578646,142568063,142566121,142562232,142561243,142560263,142559251,142558624,142556383,142555877,142553825,142553640,142553227,142550132,142549479,142547725,142542665,142540904,142538482,142536108,142535080,142523993,142522728,142519669,142515395,142513501,142512260,142507931,142505139,142503362,142499627,142498597,142497013,142496361,142493132,142485140,142470086,142469337,142467934,142466324,142465097,142461940,142459227,142458958,142457604,142453128,142449237	142578826,142568154,142566261,142563109,142561421,142560454,142559441,142558776,142556575,142556139,142554015,142553740,142553398,142550302,142549673,142547910,142542757,142541034,142538625,142536201,142535205,142524199,142522841,142519784,142515515,142513638,142512470,142508109,142505303,142503453,142499718,142498774,142497192,142496520,142493311,142485282,142470183,142469569,142468068,142466533,142465240,142462090,142459383,142459111,142457755,142453233,142449602	Gene ID= ENSG00000175054.14 TPM= 5.31 Transcript Type= protein_coding
chr3	142596387	142713664	142596387	142713664	+	ENST00000457734.6@PLS1	ENST00000457734.6	protein_coding	142596387,142664202,142669390,142670993,142676157,142678032,142684006,142684253,142686284,142689618,142694469,142697953,142703868,142704463,142711501,142711872	142596509,142664307,142669553,142671122,142676289,142678113,142684171,142684395,142686376,142689813,142694547,142698067,142704001,142704586,142711625,142713664	Gene ID= ENSG00000120756.12 TPM= 1.06 Transcript Type= protein_coding
chr3	142724038	142727453	142724038	142727453	+	transcript5752.chr3.nnic@NA	transcript5752.chr3.nnic	NA	142724038	142727453	Gene ID= novel_gene_chr3_5753 TPM= 2.12 Transcript Type= NA
chr3	142817869	142889203	142817869	142889203	-	ENST00000295992.7@PCOLCE2	ENST00000295992.7	protein_coding	142888814,142887669,142848217,142842924,142838770,142829692,142823532,142820878,142817869	142889203,142887777,142848472,142843048,142838906,142829846,142823615,142821045,142818465	Gene ID= ENSG00000163710.7 TPM= 76.48 Transcript Type= protein_coding
chr3	142961231	142963682	142961231	142963682	-	ENST00000340634.4@PAQR9	ENST00000340634.4	protein_coding	142961231	142963682	Gene ID= ENSG00000188582.8 TPM= 16.99 Transcript Type= protein_coding
chr3	143000907	143001467	143000907	143001467	-	ENST00000597953.1@AC026304.1	ENST00000597953.1	lincRNA	143000907	143001467	Gene ID= ENSG00000268129.1 TPM= 2.12 Transcript Type= lincRNA
chr3	143001539	143060546	143001539	143060546	+	ENST00000473835.6@U2SURP	ENST00000473835.6	protein_coding	143001539,143010815,143012222,143014311,143016257,143016842,143019969,143020599,143021350,143021473,143022497,143022853,143023975,143027149,143028340,143028483,143032784,143033271,143034888,143035982,143037179,143038108,143038894,143043117,143050939,143053676,143054943,143056312	143001673,143010859,143012353,143014409,143016371,143016975,143020036,143020693,143021385,143021555,143022662,143023064,143024018,143027253,143028406,143028646,143032946,143033350,143034975,143036104,143037335,143038203,143038960,143043276,143051049,143053794,143055119,143060546	Gene ID= ENSG00000163714.17 TPM= 2.66 Transcript Type= protein_coding
chr3	143001168	143056500	143001168	143056500	+	ENST00000488497.7@U2SURP	ENST00000488497.7	protein_coding	143001168,143010815,143012222,143014311,143016257,143016842,143019969,143020599,143021350,143021473,143022497,143022853,143027149,143028340,143028483,143032784,143033271,143034888,143035982,143037179,143038108,143038894,143043117,143050939,143053676,143054943,143056312	143001673,143010859,143012353,143014409,143016371,143016975,143020036,143020693,143021385,143021555,143022662,143023064,143027253,143028406,143028646,143032946,143033350,143034975,143036104,143037335,143038203,143038960,143043276,143051049,143053794,143055119,143056500	Gene ID= ENSG00000163714.17 TPM= 1.59 Transcript Type= nonsense_mediated_decay
chr3	143119331	143124014	143119331	143124014	+	ENST00000309575.4@CHST2	ENST00000309575.4	protein_coding	143119331,143120644	143120541,143124014	Gene ID= ENSG00000175040.5 TPM= 4.25 Transcript Type= protein_coding
chr3	143971798	143992359	143971798	143992359	+	ENST00000315691.7@C3orf58	ENST00000315691.7	protein_coding	143971798,143985543,143989510	143972989,143985846,143992359	Gene ID= ENSG00000181744.8 TPM= 18.06 Transcript Type= protein_coding
chr3	146069440	146161167	146069440	146161167	-	ENST00000282903.9@PLOD2	ENST00000282903.9	protein_coding	146160881,146124138,146121112,146110285,146106532,146104279,146102755,146091800,146088586,146086787,146085169,146081738,146079116,146077862,146076782,146073287,146072561,146071277,146071042,146069440	146161167,146124229,146121248,146110448,146106644,146104342,146102852,146091901,146088711,146086908,146085273,146081863,146079257,146077924,146076895,146073352,146072665,146071423,146071167,146070872	Gene ID= ENSG00000152952.11 TPM= 11.68 Transcript Type= protein_coding
chr3	146069444	146161167	146069444	146161167	-	ENST00000360060.7@PLOD2	ENST00000360060.7	protein_coding	146160881,146124138,146121112,146110285,146106532,146104279,146102755,146091800,146088586,146086787,146085169,146081738,146079116,146076782,146073287,146072561,146071277,146071042,146069444	146161167,146124229,146121248,146110448,146106644,146104342,146102852,146091901,146088711,146086908,146085273,146081863,146079257,146076895,146073352,146072665,146071423,146071167,146070872	Gene ID= ENSG00000152952.11 TPM= 4.25 Transcript Type= protein_coding
chr3	146092702	146095372	146092702	146095372	+	transcript5806.chr3.nnic@NA	transcript5806.chr3.nnic	NA	146092702	146095372	Gene ID= novel_gene_chr3_5807 TPM= 4.25 Transcript Type= NA
chr3	146158666	146161415	146158666	146161415	-	transcript5808.chr3.nnic@NA	transcript5808.chr3.nnic	NA	146158666	146161415	Gene ID= novel_gene_chr3_5809 TPM= 5.31 Transcript Type= NA
chr3	146192339	146251179	146192339	146251179	-	ENST00000354952.6@PLSCR4	ENST00000354952.6	protein_coding	146250960,146222065,146220815,146206526,146201035,146199813,146196632,146195124,146192339	146251179,146222092,146220925,146206761,146201077,146200039,146196793,146195282,146194455	Gene ID= ENSG00000114698.14 TPM= 4.78 Transcript Type= protein_coding
chr3	146192339	146251179	146192339	146251179	-	ENST00000383083.6@PLSCR4	ENST00000383083.6	protein_coding	146250960,146222065,146220815,146206526,146196632,146195124,146192339	146251179,146222092,146220925,146206761,146196793,146195282,146194455	Gene ID= ENSG00000114698.14 TPM= 2.66 Transcript Type= protein_coding
chr3	146515180	146544864	146515180	146544864	-	ENST00000342435.8@PLSCR1	ENST00000342435.8	protein_coding	146544467,146536540,146533470,146528614,146525605,146521833,146521544,146517006,146515180	146544864,146536565,146533550,146528831,146525647,146522053,146521705,146517167,146516101	Gene ID= ENSG00000188313.12 TPM= 22.31 Transcript Type= protein_coding
chr3	148697871	148743003	148697871	148743003	+	ENST00000349243.7@AGTR1	ENST00000349243.7	protein_coding	148697871,148707944,148740989	148698127,148708027,148743003	Gene ID= ENSG00000144891.17 TPM= 2.12 Transcript Type= protein_coding
chr3	148991452	149027632	148991452	149027632	+	ENST00000296048.10@GYG1	ENST00000296048.10	protein_coding	148991452,148994142,148996302,148996742,149009276,149024053,149026760	148991647,148994277,148996476,148996904,149009402,149024272,149027632	Gene ID= ENSG00000163754.17 TPM= 146.58 Transcript Type= protein_coding
chr3	149030127	149086544	149030127	149086544	-	transcript5832.chr3.nic@HLTF	transcript5832.chr3.nic	protein_coding	149086317,149084682,149075881,149074215,149073225,149071583,149071252,149068240,149064791,149063431,149060779,149060643,149059718,149055303,149050232,149048863,149048028,149046080,149042166,149041490,149040031,149039581,149039049,149034918,149030127	149086544,149084889,149076047,149074348,149073322,149071657,149071443,149068335,149064866,149063524,149060858,149060687,149059807,149055400,149050375,149049001,149048163,149046259,149042290,149041680,149040156,149039693,149039229,149034998,149032372	Gene ID= ENSG00000071794.15 TPM= 4.78 Transcript Type= NA
chr3	149030995	149086554	149030995	149086554	-	ENST00000494055.5@HLTF	ENST00000494055.5	protein_coding	149086317,149084682,149075881,149074215,149073225,149071583,149071252,149068240,149064791,149063431,149060779,149060643,149059718,149055303,149050232,149048863,149048028,149046080,149042166,149041490,149040031,149039581,149039049,149034918,149032201,149030995	149086554,149084889,149076047,149074348,149073322,149071657,149071443,149068335,149064866,149063524,149060858,149060687,149059807,149055400,149050375,149049001,149048163,149046259,149042290,149041668,149040156,149039693,149039229,149034998,149032372,149031360	Gene ID= ENSG00000071794.15 TPM= 1.06 Transcript Type= protein_coding
chr3	149030127	149086522	149030127	149086522	-	ENST00000465259.5@HLTF	ENST00000465259.5	protein_coding	149086317,149084682,149075881,149074215,149073225,149071583,149071252,149068240,149064791,149063431,149060779,149060643,149059718,149055303,149050232,149048863,149048028,149046080,149042166,149041490,149040031,149039581,149039049,149034918,149030127	149086522,149084889,149076047,149074348,149073322,149071657,149071443,149068335,149064866,149063524,149060858,149060687,149059804,149055400,149050375,149049001,149048163,149046259,149042290,149041668,149040156,149039693,149039229,149034998,149032372	Gene ID= ENSG00000071794.15 TPM= 3.72 Transcript Type= protein_coding
chr3	149129584	149173732	149129584	149173732	+	ENST00000296051.6@HPS3	ENST00000296051.6	protein_coding	149129584,149140004,149141017,149141295,149145354,149150599,149153494,149155107,149157350,149158666,149160046,149162148,149162690,149163842,149167034,149167893,149172095	149129940,149140498,149141188,149141380,149145546,149150680,149153648,149155215,149157531,149158846,149160279,149162333,149162878,149163949,149167240,149167983,149173732	Gene ID= ENSG00000163755.8 TPM= 10.62 Transcript Type= protein_coding
chr3	149318498	149333761	149318498	149333761	-	ENST00000296059.6@TM4SF18	ENST00000296059.6	protein_coding	149333513,149333206,149330330,149324880,149322256,149318498	149333761,149333399,149330419,149325022,149322436,149321492	Gene ID= ENSG00000163762.6 TPM= 2.12 Transcript Type= protein_coding
chr3	149369022	149377865	149369022	149377865	-	ENST00000305366.7@TM4SF1	ENST00000305366.7	protein_coding	149377371,149375680,149375443,149371687,149369022	149377865,149375769,149375588,149371867,149369880	Gene ID= ENSG00000169908.11 TPM= 145.52 Transcript Type= protein_coding
chr3	149520245	149658101	149520245	149658101	-	ENST00000360632.7@WWTR1	ENST00000360632.7	protein_coding	149657765,149656876,149572864,149542335,149527836,149526013,149520245	149658101,149657309,149573000,149542537,149527969,149526125,149520989	Gene ID= ENSG00000018408.14 TPM= 9.56 Transcript Type= protein_coding
chr3	149534816	149536480	149534816	149536480	+	transcript5861.chr3.nnic@NA	transcript5861.chr3.nnic	NA	149534816	149536480	Gene ID= novel_gene_chr3_5862 TPM= 2.12 Transcript Type= NA
chr3	149738470	149752499	149738470	149752499	-	ENST00000473414.5@COMMD2	ENST00000473414.5	protein_coding	149752378,149752210,149751403,149750678,149738470	149752499,149752287,149751485,149750851,149741718	Gene ID= ENSG00000114744.8 TPM= 9.56 Transcript Type= protein_coding
chr3	149812708	149962139	149812708	149962139	+	ENST00000392894.7@RNF13	ENST00000392894.7	protein_coding	149812708,149846011,149852516,149872029,149895473,149902072,149911978,149921134,149960056,149960740	149813353,149846140,149852596,149872154,149895560,149902162,149912083,149921227,149960136,149962139	Gene ID= ENSG00000082996.19 TPM= 65.85 Transcript Type= protein_coding
chr3	149813197	149873954	149813197	149873954	+	transcript5887.chr3.nnic@RNF13	transcript5887.chr3.nnic	protein_coding	149813197,149846011,149852516,149872029,149873549	149813353,149846140,149852596,149872154,149873954	Gene ID= ENSG00000082996.19 TPM= 4.25 Transcript Type= NA
chr3	149813197	149873958	149813197	149873958	+	transcript5888.chr3.nnic@RNF13	transcript5888.chr3.nnic	protein_coding	149813197,149846011,149852516,149872029,149873752	149813353,149846140,149852596,149872154,149873958	Gene ID= ENSG00000082996.19 TPM= 3.19 Transcript Type= NA
chr3	149812770	149962122	149812770	149962122	+	ENST00000344229.7@RNF13	ENST00000344229.7	protein_coding	149812770,149813925,149846011,149852516,149872029,149895473,149902072,149911978,149921134,149960056,149960740	149813353,149814026,149846140,149852596,149872154,149895560,149902162,149912083,149921227,149960136,149962122	Gene ID= ENSG00000082996.19 TPM= 5.31 Transcript Type= protein_coding
chr3	149964904	149970950	149964904	149970950	-	ENST00000452853.6@PFN2	ENST00000452853.6	protein_coding	149970725,149968358,149964904	149970950,149968550,149966264	Gene ID= ENSG00000070087.13 TPM= 109.4 Transcript Type= protein_coding
chr3	149964909	149970887	149964909	149970887	-	transcript5899.chr3.nnic@NA	transcript5899.chr3.nnic	NA	149964909	149970887	Gene ID= novel_gene_chr3_5900 TPM= 9.56 Transcript Type= NA
chr3	149971016	149973240	149971016	149973240	+	transcript5897.chr3.nnic@NA	transcript5897.chr3.nnic	NA	149971016	149973240	Gene ID= novel_gene_chr3_5898 TPM= 4.25 Transcript Type= NA
chr3	150408335	150466431	150408335	150466431	+	ENST00000361875.7@TSC22D2	ENST00000361875.7	protein_coding	150408335,150423049,150457076,150458376	150411308,150423120,150457127,150466431	Gene ID= ENSG00000196428.12 TPM= 70.1 Transcript Type= protein_coding
chr3	150409192	150415827	150409192	150415827	+	transcript5919.chr3.nnic@NA	transcript5919.chr3.nnic	NA	150409192	150415827	Gene ID= novel_gene_chr3_5920 TPM= 8.5 Transcript Type= NA
chr3	150542177	150546539	150542177	150546539	-	transcript5930.chr3.nnic@NA	transcript5930.chr3.nnic	NA	150542177	150546539	Gene ID= novel_gene_chr3_5931 TPM= 3.19 Transcript Type= NA
chr3	150546786	150564899	150546786	150564899	+	ENST00000474505.5@EIF2A	ENST00000474505.5	protein_coding	150546786,150552356,150558388,150562542,150563515,150564299	150546830,150552425,150558462,150562660,150563614,150564899	Gene ID= ENSG00000144895.11 TPM= 3.19 Transcript Type= retained_intron
chr3	150603288	150630435	150603288	150630435	+	ENST00000471696.5@SELENOT	ENST00000471696.5	protein_coding	150603288,150622385,150623043,150624812,150627010,150627659	150603499,150622495,150623169,150624899,150627163,150630435	Gene ID= ENSG00000198843.12 TPM= 39.3 Transcript Type= protein_coding
chr3	150741129	150763165	150741129	150763165	-	transcript5955.chr3.nnic@SIAH2	transcript5955.chr3.nnic	protein_coding	150762433,150745696,150741129	150763165,150745860,150742698	Gene ID= ENSG00000181788.3 TPM= 2.12 Transcript Type= NA
chr3	150741127	150763377	150741127	150763377	-	ENST00000312960.3@SIAH2	ENST00000312960.3	protein_coding	150762433,150741127	150763377,150742698	Gene ID= ENSG00000181788.3 TPM= 127.46 Transcript Type= protein_coding
chr3	150752470	150755365	150752470	150755365	+	transcript5958.chr3.nnic@NA	transcript5958.chr3.nnic	NA	150752470	150755365	Gene ID= novel_gene_chr3_5959 TPM= 2.12 Transcript Type= NA
chr3	151326312	151329548	151326312	151329548	-	ENST00000325602.5@P2RY13	ENST00000325602.5	protein_coding	151329481,151326312	151329548,151329007	Gene ID= ENSG00000181631.6 TPM= 1.06 Transcript Type= protein_coding
chr3	152268468	152465780	152268468	152465780	+	ENST00000355460.6@MBNL1	ENST00000355460.6	protein_coding	152268468,152299405,152414941,152432717,152445282,152447620,152456267,152459271,152462385	152269092,152300367,152415111,152432920,152445539,152447773,152456361,152459345,152465780	Gene ID= ENSG00000152601.17 TPM= 17.1 Transcript Type= protein_coding
chr3	152298836	152465780	152298836	152465780	+	transcript5974.chr3.nic@MBNL1	transcript5974.chr3.nic	protein_coding	152298836,152299405,152414941,152432717,152445282,152447620,152456267,152459271,152462385	152299254,152300367,152415111,152432920,152445539,152447773,152456361,152459345,152465780	Gene ID= ENSG00000152601.17 TPM= 10.73 Transcript Type= NA
chr3	152268861	152465780	152268861	152465780	+	transcript5975.chr3.nic@MBNL1	transcript5975.chr3.nic	protein_coding	152268861,152299405,152414941,152432717,152445282,152447620,152459271,152462385	152269092,152300367,152415111,152432920,152445539,152447773,152459345,152465780	Gene ID= ENSG00000152601.17 TPM= 10.73 Transcript Type= NA
chr3	152269649	152465780	152269649	152465780	+	transcript5977.chr3.nnic@MBNL1	transcript5977.chr3.nnic	protein_coding	152269649,152299405,152414941,152432717,152445282,152447620,152459271,152462385	152269778,152300367,152415111,152432920,152445539,152447773,152459345,152465780	Gene ID= ENSG00000152601.17 TPM= 6.48 Transcript Type= NA
chr3	152262616	152269555	152262616	152269555	-	ENST00000608395.1@MBNL1-AS1	ENST00000608395.1	antisense_RNA	152269428,152262616	152269555,152269072	Gene ID= ENSG00000229619.3 TPM= 1.06 Transcript Type= antisense_RNA
chr3	152299401	152303535	152299401	152303535	+	transcript5998.chr3.nnic@NA	transcript5998.chr3.nnic	NA	152299401	152303535	Gene ID= novel_gene_chr3_5999 TPM= 4.25 Transcript Type= NA
chr3	152313028	152314531	152313028	152314531	-	transcript6006.chr3.nnic@NA	transcript6006.chr3.nnic	NA	152313028	152314531	Gene ID= novel_gene_chr3_6007 TPM= 3.19 Transcript Type= NA
chr3	152314378	152318890	152314378	152318890	-	transcript6000.chr3.nnic@NA	transcript6000.chr3.nnic	NA	152314378	152318890	Gene ID= novel_gene_chr3_6001 TPM= 16.99 Transcript Type= NA
chr3	152370835	152373619	152370835	152373619	-	transcript6002.chr3.nnic@NA	transcript6002.chr3.nnic	NA	152370835	152373619	Gene ID= novel_gene_chr3_6003 TPM= 5.31 Transcript Type= NA
chr3	152447445	152449118	152447445	152449118	-	transcript6004.chr3.nnic@NA	transcript6004.chr3.nnic	NA	152447445	152449118	Gene ID= novel_gene_chr3_6005 TPM= 4.25 Transcript Type= NA
chr3	152835111	152838054	152835111	152838054	+	transcript6008.chr3.nnic@NA	transcript6008.chr3.nnic	NA	152835111	152838054	Gene ID= novel_gene_chr3_6009 TPM= 2.12 Transcript Type= NA
chr3	153162167	153164724	153162167	153164724	+	transcript6012.chr3.nnic@NA	transcript6012.chr3.nnic	NA	153162167	153164724	Gene ID= novel_gene_chr3_6013 TPM= 23.37 Transcript Type= NA
chr3	154272546	154324497	154272546	154324497	-	ENST00000496811.5@DHX36	ENST00000496811.5	protein_coding	154324174,154316039,154315046,154311636,154309653,154306216,154305094,154304806,154303329,154300987,154300594,154299838,154295284,154293748,154292551,154289709,154288866,154284814,154284583,154283188,154280763,154280579,154277598,154276747,154272546	154324497,154316163,154315280,154311674,154309823,154306295,154305168,154304972,154303410,154301127,154300696,154299925,154295339,154293812,154292694,154289826,154288964,154284987,154284669,154283271,154280862,154280669,154277718,154276899,154276356	Gene ID= ENSG00000174953.13 TPM= 7.44 Transcript Type= protein_coding
chr3	155290229	155293775	155290229	155293775	-	ENST00000489090.1@DWORF	ENST00000489090.1	protein_coding	155293620,155290940,155290229	155293775,155291038,155290846	Gene ID= ENSG00000240045.1 TPM= 2.12 Transcript Type= protein_coding
chr3	155762617	155806351	155762617	155806351	-	ENST00000340171.6@C3orf33	ENST00000340171.6	protein_coding	155806139,155802532,155775701,155767509,155762617	155806351,155802591,155775848,155767669,155763918	Gene ID= ENSG00000174928.15 TPM= 20.18 Transcript Type= protein_coding
chr3	155762617	155806266	155762617	155806266	-	ENST00000482061.6@C3orf33	ENST00000482061.6	protein_coding	155806139,155805597,155802532,155775701,155767509,155762617	155806266,155805723,155802591,155775848,155767669,155763918	Gene ID= ENSG00000174928.15 TPM= 1.06 Transcript Type= nonsense_mediated_decay
chr3	155826526	155854429	155826526	155854429	-	ENST00000359479.7@SLC33A1	ENST00000359479.7	protein_coding	155853223,155842432,155833857,155833468,155829688,155828182,155826526	155854429,155842619,155834041,155833585,155829903,155828377,155826819	Gene ID= ENSG00000169359.13 TPM= 6.37 Transcript Type= protein_coding
chr3	155873640	155877391	155873640	155877391	-	transcript6050.chr3.nnic@NA	transcript6050.chr3.nnic	NA	155873640	155877391	Gene ID= novel_gene_chr3_6051 TPM= 4.25 Transcript Type= NA
chr3	156421614	156538604	156421614	156538604	+	transcript6055.chr3.nic@KCNAB1	transcript6055.chr3.nic	protein_coding	156421614,156452899,156457453,156459827,156463702,156465643,156474734,156514364,156515100,156516270,156523827,156531409,156536658	156421659,156452936,156457532,156459871,156463746,156465686,156474820,156514449,156515220,156516364,156523947,156531497,156538604	Gene ID= ENSG00000169282.17 TPM= 2.12 Transcript Type= NA
chr3	156526721	156529502	156526721	156529502	+	transcript6059.chr3.nnic@NA	transcript6059.chr3.nnic	NA	156526721	156529502	Gene ID= novel_gene_chr3_6060 TPM= 3.19 Transcript Type= NA
chr3	156538149	156541213	156538149	156541213	-	transcript6061.chr3.nnic@NA	transcript6061.chr3.nnic	NA	156538149	156541213	Gene ID= novel_gene_chr3_6062 TPM= 5.31 Transcript Type= NA
chr3	156540140	156555184	156540140	156555184	-	ENST00000265044.6@SSR3	ENST00000265044.6	protein_coding	156554957,156553655,156548905,156544308,156540140	156555184,156553781,156549003,156544439,156543269	Gene ID= ENSG00000114850.6 TPM= 110.46 Transcript Type= protein_coding
chr3	156543004	156555125	156543004	156555125	-	ENST00000476217.5@SSR3	ENST00000476217.5	protein_coding	156554957,156553655,156548905,156544294,156543004	156555125,156553781,156549003,156544439,156543269	Gene ID= ENSG00000114850.6 TPM= 72.23 Transcript Type= protein_coding
chr3	156671862	156674378	156671862	156674378	-	ENST00000492937.1@TIPARP-AS1	ENST00000492937.1	antisense_RNA	156674207,156671862	156674378,156672130	Gene ID= ENSG00000243926.1 TPM= 1.06 Transcript Type= antisense_RNA
chr3	156674342	156706770	156674342	156706770	+	ENST00000295924.11@TIPARP	ENST00000295924.11	protein_coding	156674342,156677657,156694020,156695865,156703424,156704684	156674796,156678614,156694188,156696025,156703702,156706770	Gene ID= ENSG00000163659.12 TPM= 4.25 Transcript Type= protein_coding
chr3	156747346	156817034	156747346	156817034	-	ENST00000472943.5@LINC00886	ENST00000472943.5	lincRNA	156816887,156751095,156747346	156817034,156751183,156750414	Gene ID= ENSG00000240875.5 TPM= 3.19 Transcript Type= lincRNA
chr3	157089881	157101135	157089881	157101135	+	ENST00000471719.1@LINC00881	ENST00000471719.1	lincRNA	157089881,157099483,157100686	157090122,157099581,157101135	Gene ID= ENSG00000241135.5 TPM= 14.87 Transcript Type= lincRNA
chr3	157143873	157145462	157143873	157145462	+	transcript6079.chr3.nnic@NA	transcript6079.chr3.nnic	NA	157143873	157145462	Gene ID= novel_gene_chr3_6080 TPM= 7.44 Transcript Type= NA
chr3	157147796	157160363	157147796	157160363	-	ENST00000631619.1@CCNL1	ENST00000631619.1	protein_coding	157159792,157159405,157158866,157156936,157153036,157152177,157151917,157150282,157150065,157149836,157149485,157149287,157147796	157160363,157159479,157158975,157157083,157153156,157152241,157151930,157150381,157150169,157149977,157149596,157149385,157148589	Gene ID= ENSG00000163660.11 TPM= 2.12 Transcript Type= nonsense_mediated_decay
chr3	157146508	157160760	157146508	157160760	-	ENST00000461804.5@CCNL1	ENST00000461804.5	protein_coding	157159792,157159405,157158866,157153036,157152177,157150282,157150065,157149836,157149485,157149287,157146508	157160760,157159479,157158975,157153156,157152241,157150381,157150169,157149977,157149596,157149385,157146607	Gene ID= ENSG00000163660.11 TPM= 1.06 Transcript Type= protein_coding
chr3	157436789	157443628	157436789	157443628	+	ENST00000295927.3@PTX3	ENST00000295927.3	protein_coding	157436789,157437513,157442366	157437063,157437914,157443628	Gene ID= ENSG00000163661.3 TPM= 1.06 Transcript Type= protein_coding
chr3	158110052	158544834	158110052	158544834	+	ENST00000611884.4@RSRC1	ENST00000611884.4	protein_coding	158110052,158122103,158123866,158203072,158298039,158354857,158460935,158537092,158543335,158544183	158110223,158122298,158123991,158203245,158298075,158354908,158461003,158537198,158543487,158544834	Gene ID= ENSG00000174891.12 TPM= 3.19 Transcript Type= protein_coding
chr3	158110052	158544835	158110052	158544835	+	ENST00000295930.7@RSRC1	ENST00000295930.7	protein_coding	158110052,158122103,158123866,158203072,158298039,158354857,158460935,158537092,158543335,158544183	158110211,158122298,158123991,158203245,158298075,158354908,158461003,158537198,158543487,158544835	Gene ID= ENSG00000174891.12 TPM= 3.19 Transcript Type= protein_coding
chr3	158110068	158460962	158110068	158460962	+	ENST00000471994.5@RSRC1	ENST00000471994.5	protein_coding	158110068,158122103,158123866,158203072,158298039,158354857,158460935	158110223,158122298,158123991,158203245,158298075,158354908,158460962	Gene ID= ENSG00000174891.12 TPM= 1.06 Transcript Type= protein_coding
chr3	158571189	158605397	158571189	158605397	+	transcript6095.chr3.nic@MLF1	transcript6095.chr3.nic	protein_coding	158571189,158588852,158592434,158593382,158596862,158598080,158600014,158602807,158605097	158571347,158588924,158592581,158593426,158596945,158598208,158600173,158602939,158605397	Gene ID= ENSG00000178053.17 TPM= 9.74 Transcript Type= NA
chr3	158571149	158606456	158571149	158606456	+	transcript6098.chr3.nic@MLF1	transcript6098.chr3.nic	protein_coding	158571149,158592434,158593382,158596862,158598080,158600014,158602807,158605097	158571347,158592581,158593426,158596945,158598208,158600173,158602939,158606456	Gene ID= ENSG00000178053.17 TPM= 16.2 Transcript Type= NA
chr3	158571173	158605397	158571173	158605397	+	ENST00000484955.5@MLF1	ENST00000484955.5	protein_coding	158571173,158588852,158592434,158596862,158598080,158600014,158602807,158605097	158571391,158588924,158592581,158596945,158598208,158600173,158602939,158605397	Gene ID= ENSG00000178053.17 TPM= 2.84 Transcript Type= protein_coding
chr3	158571164	158606459	158571164	158606459	+	ENST00000619577.4@MLF1	ENST00000619577.4	protein_coding	158571164,158592434,158593382,158596862,158598080,158600014,158602807,158605097	158571391,158592581,158593426,158596945,158598208,158600173,158602939,158606459	Gene ID= ENSG00000178053.17 TPM= 18.32 Transcript Type= protein_coding
chr3	158571184	158606456	158571184	158606456	+	ENST00000359117.9@MLF1	ENST00000359117.9	protein_coding	158571184,158592434,158596862,158598080,158600014,158602807,158605097	158571391,158592581,158596945,158598208,158600173,158602939,158606456	Gene ID= ENSG00000178053.17 TPM= 9.82 Transcript Type= protein_coding
chr3	158571186	158605397	158571186	158605397	+	transcript6112.chr3.nic@MLF1	transcript6112.chr3.nic	protein_coding	158571186,158596862,158598080,158600014,158602807,158605097	158571391,158596945,158598208,158600173,158602939,158605397	Gene ID= ENSG00000178053.17 TPM= 3.37 Transcript Type= NA
chr3	158571194	158605392	158571194	158605392	+	ENST00000471745.5@MLF1	ENST00000471745.5	protein_coding	158571194,158588852,158592434,158593382,158596862,158598080,158600014,158602807,158605097	158571391,158588924,158592581,158593426,158596945,158598208,158600173,158602939,158605392	Gene ID= ENSG00000178053.17 TPM= 12.93 Transcript Type= protein_coding
chr3	158571163	158606460	158571163	158606460	+	ENST00000355893.9@MLF1	ENST00000355893.9	protein_coding	158571163,158592434,158596862,158598080,158600014,158602807,158605097	158571347,158592581,158596945,158598208,158600173,158602939,158606460	Gene ID= ENSG00000178053.17 TPM= 7.7 Transcript Type= protein_coding
chr3	158573976	158575481	158573976	158575481	-	transcript6116.chr3.nnic@NA	transcript6116.chr3.nnic	NA	158573976	158575481	Gene ID= novel_gene_chr3_6117 TPM= 3.19 Transcript Type= NA
chr3	158644278	158692575	158644278	158692575	+	ENST00000486715.5@GFM1	ENST00000486715.5	protein_coding	158644278,158645629,158646165,158646743,158649041,158652096,158653310,158654547,158658922,158660874,158662628,158665337,158666304,158681995,158684524,158690163,158691139,158691336	158644715,158645781,158646297,158646947,158649157,158652246,158653467,158654631,158659059,158660975,158662684,158665474,158666386,158682157,158684668,158690323,158691192,158692575	Gene ID= ENSG00000168827.14 TPM= 83.91 Transcript Type= protein_coding
chr3	158644528	158682433	158644528	158682433	+	ENST00000478576.5@GFM1	ENST00000478576.5	protein_coding	158644528,158645629,158646165,158646743,158649041,158652096,158653310,158654547,158658922,158660874,158662628,158665337,158666304,158681995	158644715,158645781,158646297,158646947,158649157,158652246,158653467,158654631,158659059,158660975,158662684,158665474,158666386,158682433	Gene ID= ENSG00000168827.14 TPM= 1.06 Transcript Type= protein_coding
chr3	158666414	158672693	158666414	158672693	-	ENST00000264265.3@LXN	ENST00000264265.3	protein_coding	158672350,158670957,158669433,158668996,158667012,158666414	158672693,158671019,158669610,158669132,158667074,158666744	Gene ID= ENSG00000079257.7 TPM= 7.44 Transcript Type= protein_coding
chr3	158730767	158732457	158730767	158732457	-	transcript6141.chr3.nnic@NA	transcript6141.chr3.nnic	NA	158730767	158732457	Gene ID= novel_gene_chr3_6142 TPM= 2.12 Transcript Type= NA
chr3	158802057	158829716	158802057	158829716	+	ENST00000480292.5@MFSD1	ENST00000480292.5	protein_coding	158802057,158804319,158807040,158807396,158809179,158813965,158819649,158820215,158821597,158821984,158823428,158824124,158825178,158826015,158827280,158828979	158802315,158804371,158807082,158807463,158809287,158814067,158819747,158820326,158821653,158822140,158823525,158824236,158825301,158826062,158827337,158829716	Gene ID= ENSG00000118855.18 TPM= 1.06 Transcript Type= nonsense_mediated_decay
chr3	158802051	158829716	158802051	158829716	+	ENST00000484166.5@MFSD1	ENST00000484166.5	protein_coding	158802051,158804319,158807040,158807396,158809179,158813965,158819649,158820215,158821597,158821984,158823428,158824124,158826015,158827280,158828979	158802315,158804371,158807082,158807463,158809287,158814067,158819747,158820326,158821653,158822140,158823525,158824236,158826062,158827337,158829716	Gene ID= ENSG00000118855.18 TPM= 7.44 Transcript Type= nonsense_mediated_decay
chr3	158802091	158829116	158802091	158829116	+	ENST00000264266.12@MFSD1	ENST00000264266.12	protein_coding	158802091,158804319,158805362,158807040,158807396,158809179,158813965,158819649,158820215,158821597,158821984,158823428,158824124,158826015,158827280,158828979	158802315,158804371,158805474,158807082,158807463,158809287,158814067,158819747,158820326,158821653,158822140,158823525,158824236,158826062,158827337,158829116	Gene ID= ENSG00000118855.18 TPM= 1.06 Transcript Type= protein_coding
chr3	159763701	159897358	159763701	159897358	+	transcript6150.chr3.nic@IQCJ-SCHIP1	transcript6150.chr3.nic	protein_coding	159763701,159764443,159866163,159886207,159887708,159888820,159892097,159896723	159763890,159765138,159866281,159886324,159887905,159888943,159892190,159897358	Gene ID= ENSG00000283154.2 TPM= 16.08 Transcript Type= NA
chr3	159763946	159897358	159763946	159897358	+	transcript6152.chr3.nic@IQCJ-SCHIP1	transcript6152.chr3.nic	protein_coding	159763946,159764443,159866163,159886207,159887708,159888820,159892097,159896723	159764224,159765138,159866281,159886324,159887905,159888943,159892190,159897358	Gene ID= ENSG00000283154.2 TPM= 36.26 Transcript Type= NA
chr3	159763981	159897358	159763981	159897358	+	transcript6154.chr3.nic@IQCJ-SCHIP1	transcript6154.chr3.nic	protein_coding	159763981,159764443,159866163,159886207,159887708,159888820,159892097,159896723	159764350,159765138,159866281,159886324,159887905,159888943,159892190,159897358	Gene ID= ENSG00000283154.2 TPM= 21.39 Transcript Type= NA
chr3	159764205	159897358	159764205	159897358	+	transcript6159.chr3.nic@IQCJ-SCHIP1	transcript6159.chr3.nic	protein_coding	159764205,159866163,159886207,159887708,159888820,159892097,159896723	159765138,159866281,159886324,159887905,159888943,159892190,159897358	Gene ID= ENSG00000283154.2 TPM= 27.76 Transcript Type= NA
chr3	159771694	159773031	159771694	159773031	-	transcript6174.chr3.nnic@NA	transcript6174.chr3.nnic	NA	159771694	159773031	Gene ID= novel_gene_chr3_6175 TPM= 4.25 Transcript Type= NA
chr3	159852939	159897349	159852939	159897349	+	ENST00000482804.1@SCHIP1	ENST00000482804.1	protein_coding	159852939,159866163,159886207,159887708,159888820,159892097,159896723	159853457,159866281,159886324,159887905,159888943,159892190,159897349	Gene ID= ENSG00000151967.18 TPM= 103.47 Transcript Type= protein_coding
chr3	159988750	159996012	159988750	159996012	+	ENST00000305579.6@IL12A	ENST00000305579.6	protein_coding	159988750,159990167,159993012,159993451,159993568,159993701,159995404	159989174,159990312,159993125,159993492,159993609,159993844,159996012	Gene ID= ENSG00000168811.6 TPM= 2.12 Transcript Type= protein_coding
chr3	160225496	160228213	160225496	160228213	+	ENST00000326474.4@C3orf80	ENST00000326474.4	protein_coding	160225496	160228213	Gene ID= ENSG00000180044.5 TPM= 5.31 Transcript Type= protein_coding
chr3	160399288	160416337	160399288	160416337	+	transcript6177.chr3.nic@SMC4	transcript6177.chr3.nic	protein_coding	160399288,160400822,160401915,160402676,160404328,160411920,160412326,160413473,160414367,160416251	160399749,160400965,160402093,160402867,160404504,160412084,160412453,160413613,160414517,160416337	Gene ID= ENSG00000113810.15 TPM= 10.62 Transcript Type= NA
chr3	160515467	160565606	160515467	160565606	-	transcript6189.chr3.nic@KPNA4	transcript6189.chr3.nic	protein_coding	160565214,160536796,160535808,160535661,160535513,160531462,160530855,160527953,160525938,160525800,160521779,160515467	160565606,160536840,160535897,160535690,160535565,160531557,160530940,160528039,160526107,160525844,160521910,160515580	Gene ID= ENSG00000186432.8 TPM= 5.31 Transcript Type= NA
chr3	160494995	160565588	160494995	160565588	-	ENST00000334256.8@KPNA4	ENST00000334256.8	protein_coding	160565214,160536796,160535808,160535661,160535513,160531462,160530855,160527953,160525938,160525800,160521779,160515452,160514077,160509800,160508107,160504958,160494995	160565588,160536840,160535897,160535690,160535565,160531557,160530940,160528039,160526107,160525844,160521910,160515580,160514181,160509871,160508269,160505052,160502202	Gene ID= ENSG00000186432.8 TPM= 13.81 Transcript Type= protein_coding
chr3	160565776	160569490	160565776	160569490	+	transcript6192.chr3.nnic@KRT8P12	transcript6192.chr3.nnic	transcribed_processed_pseudogene	160565776,160568178	160566153,160569490	Gene ID= ENSG00000229320.3 TPM= 6.37 Transcript Type= NA
chr3	160565734	160569488	160565734	160569488	+	transcript6193.chr3.nnic@NA	transcript6193.chr3.nnic	NA	160565734	160569488	Gene ID= novel_gene_chr3_6194 TPM= 5.31 Transcript Type= NA
chr3	160753427	160755366	160753427	160755366	-	transcript6195.chr3.nnic@NA	transcript6195.chr3.nnic	NA	160753427	160755366	Gene ID= novel_gene_chr3_6196 TPM= 2.12 Transcript Type= NA
chr3	160961734	161071028	160961734	161071028	+	transcript6197.chr3.nic@PPM1L	transcript6197.chr3.nic	protein_coding	160961734,161065403,161068811	160961910,161065564,161071028	Gene ID= ENSG00000163590.13 TPM= 7.44 Transcript Type= NA
chr3	161073710	161076474	161073710	161076474	+	transcript6198.chr3.nnic@NA	transcript6198.chr3.nnic	NA	161073710	161076474	Gene ID= novel_gene_chr3_6199 TPM= 2.12 Transcript Type= NA
chr3	161083897	161105146	161083897	161105146	-	transcript6204.chr3.nic@B3GALNT1	transcript6204.chr3.nic	protein_coding	161104785,161104319,161103427,161101139,161089944,161083897	161105146,161104406,161103517,161101233,161090062,161086788	Gene ID= ENSG00000169255.13 TPM= 4.25 Transcript Type= NA
chr3	161083883	161105324	161083883	161105324	-	ENST00000320474.8@B3GALNT1	ENST00000320474.8	protein_coding	161105235,161104319,161103427,161101139,161083883	161105324,161104406,161103517,161101233,161086788	Gene ID= ENSG00000169255.13 TPM= 13.81 Transcript Type= protein_coding
chr3	161083883	161105370	161083883	161105370	-	ENST00000392779.6@B3GALNT1	ENST00000392779.6	protein_coding	161105235,161104319,161103427,161083883	161105370,161104406,161103517,161086788	Gene ID= ENSG00000169255.13 TPM= 5.31 Transcript Type= protein_coding
chr3	161221264	161252307	161221264	161252307	+	transcript6238.chr3.nic@NMD3	transcript6238.chr3.nic	protein_coding	161221264,161221994,161224930,161227247,161233399,161234727,161235122,161238113,161238730,161241046,161242508,161246336,161247258,161249454,161250256,161250780	161221331,161222057,161225064,161227343,161233479,161234855,161235212,161238191,161238826,161241163,161242653,161246448,161247330,161249560,161250326,161252307	Gene ID= ENSG00000169251.12 TPM= 18.06 Transcript Type= NA
chr3	161221290	161252307	161221290	161252307	+	ENST00000351193.6@NMD3	ENST00000351193.6	protein_coding	161221290,161221994,161224930,161227247,161233399,161234727,161235122,161238113,161238730,161241046,161242508,161246336,161247258,161249454,161250256,161250780	161221409,161222057,161225064,161227343,161233479,161234855,161235212,161238191,161238826,161241163,161242653,161246448,161247330,161249560,161250326,161252307	Gene ID= ENSG00000169251.12 TPM= 91.35 Transcript Type= protein_coding
chr3	161221516	161252004	161221516	161252004	+	transcript6241.chr3.nic@NMD3	transcript6241.chr3.nic	protein_coding	161221516,161221994,161224930,161227247,161233399,161234727,161235122,161238113,161238730,161241046,161242508,161246336,161247258,161249454,161250256,161250780	161221724,161222057,161225064,161227343,161233479,161234855,161235212,161238191,161238826,161241163,161242653,161246448,161247330,161249560,161250326,161252004	Gene ID= ENSG00000169251.12 TPM= 3.19 Transcript Type= NA
chr3	167683912	167734930	167683912	167734930	-	ENST00000497056.6@PDCD10	ENST00000497056.6	protein_coding	167734806,167720062,167704842,167697009,167695596,167687615,167687234,167683912	167734930,167720273,167704895,167697126,167695722,167687693,167687316,167684389	Gene ID= ENSG00000114209.14 TPM= 32.93 Transcript Type= protein_coding
chr3	167683910	167734939	167683910	167734939	-	ENST00000473645.6@PDCD10	ENST00000473645.6	protein_coding	167734806,167725401,167720062,167704842,167697009,167695596,167687615,167687234,167683910	167734939,167725473,167720273,167704895,167697126,167695722,167687693,167687316,167684389	Gene ID= ENSG00000114209.14 TPM= 37.18 Transcript Type= protein_coding
chr3	167703657	167708280	167703657	167708280	+	transcript6258.chr3.nnic@NA	transcript6258.chr3.nnic	NA	167703657	167708280	Gene ID= novel_gene_chr3_6259 TPM= 2.12 Transcript Type= NA
chr3	168008677	168094984	168008677	168094984	-	transcript6271.chr3.nnic@GOLIM4	transcript6271.chr3.nnic	protein_coding	168094712,168048291,168046950,168044828,168043379,168041392,168040786,168036836,168032520,168029780,168029223,168027728,168024928,168024526,168010743,168008677	168094984,168048365,168046999,168044881,168043529,168041474,168040869,168036994,168032852,168030036,168029302,168027837,168025095,168024594,168010823,168010418	Gene ID= ENSG00000173905.8 TPM= 8.15 Transcript Type= NA
chr3	168008677	168095975	168008677	168095975	-	ENST00000470487.5@GOLIM4	ENST00000470487.5	protein_coding	168095099,168048291,168046950,168044828,168043379,168041392,168040786,168036836,168032520,168029780,168029223,168027728,168024928,168024526,168010743,168008677	168095975,168048365,168046999,168044881,168043529,168041474,168040869,168036994,168032852,168030036,168029302,168027837,168025095,168024594,168010823,168010418	Gene ID= ENSG00000173905.8 TPM= 19.83 Transcript Type= protein_coding
chr3	168008677	168094984	168008677	168094984	-	transcript6277.chr3.nnic@GOLIM4	transcript6277.chr3.nnic	protein_coding	168094712,168048291,168046950,168044828,168043379,168041392,168036836,168032520,168029780,168029223,168027728,168024928,168024526,168010743,168008677	168094984,168048365,168046999,168044881,168043529,168041474,168036994,168032852,168030036,168029302,168027837,168025095,168024594,168010823,168010418	Gene ID= ENSG00000173905.8 TPM= 12.4 Transcript Type= NA
chr3	168010743	168095810	168010743	168095810	-	transcript6286.chr3.nic@GOLIM4	transcript6286.chr3.nic	protein_coding	168095099,168048291,168046950,168044828,168043379,168041392,168036836,168032520,168029780,168029223,168027728,168024928,168024526,168010743	168095810,168048365,168046999,168044881,168043529,168041474,168036994,168032852,168030036,168029302,168027837,168025095,168024594,168010823	Gene ID= ENSG00000173905.8 TPM= 3.19 Transcript Type= NA
chr3	168028522	168030527	168028522	168030527	+	transcript6297.chr3.nnic@NA	transcript6297.chr3.nnic	NA	168028522	168030527	Gene ID= novel_gene_chr3_6298 TPM= 4.25 Transcript Type= NA
chr3	169084744	169147671	169084744	169147671	-	transcript6301.chr3.nic@MECOM	transcript6301.chr3.nic	protein_coding	169146723,169143698,169131429,169127844,169122580,169121056,169115383,169112787,169107926,169102060,169100885,169095076,169092958,169090000,169089000,169084744	169147671,169143832,169131531,169128060,169122727,169121212,169116739,169112874,169107952,169102226,169100962,169095245,169093102,169090236,169089183,169085043	Gene ID= ENSG00000085276.17 TPM= 2.12 Transcript Type= NA
chr3	169083507	169147734	169083507	169147734	-	ENST00000464456.5@MECOM	ENST00000464456.5	protein_coding	169146723,169143698,169131429,169127844,169122580,169121056,169115383,169112787,169102060,169100885,169095076,169092958,169090000,169089000,169083507	169147734,169143832,169131531,169128060,169122727,169121209,169116739,169112874,169102226,169100962,169095245,169093102,169090236,169089183,169085043	Gene ID= ENSG00000085276.17 TPM= 3.19 Transcript Type= protein_coding
chr3	169084762	169146675	169084762	169146675	-	ENST00000468789.5@MECOM	ENST00000468789.5	protein_coding	169146477,169143698,169131429,169127844,169122580,169121056,169115383,169112787,169107926,169102060,169100885,169095076,169092958,169090000,169089000,169084762	169146675,169143832,169131531,169128060,169122727,169121209,169116739,169112874,169107952,169102226,169100962,169095245,169093102,169090236,169089183,169085043	Gene ID= ENSG00000085276.17 TPM= 1.06 Transcript Type= protein_coding
chr3	169105592	169107973	169105592	169107973	+	transcript6305.chr3.nnic@NA	transcript6305.chr3.nnic	NA	169105592	169107973	Gene ID= novel_gene_chr3_6306 TPM= 2.12 Transcript Type= NA
chr3	169560890	169562502	169560890	169562502	-	transcript6307.chr3.nnic@NA	transcript6307.chr3.nnic	NA	169560890	169562502	Gene ID= novel_gene_chr3_6308 TPM= 2.12 Transcript Type= NA
chr3	169772831	169789181	169772831	169789181	+	ENST00000349841.9@MYNN	ENST00000349841.9	protein_coding	169772831,169774265,169778768,169780590,169782465,169783477,169784622,169786416	169773462,169774561,169779561,169780749,169782643,169783560,169784708,169789181	Gene ID= ENSG00000085274.15 TPM= 7.44 Transcript Type= protein_coding
chr3	169793473	169812690	169793473	169812690	-	ENST00000522596.6@LRRC34	ENST00000522596.6	protein_coding	169812570,169808628,169807588,169807426,169806848,169804053,169800659,169796745,169793473	169812690,169808745,169807709,169807490,169806931,169804181,169800754,169796899,169796369	Gene ID= ENSG00000171757.15 TPM= 1.06 Transcript Type= retained_intron
chr3	169966765	169998373	169966765	169998373	+	ENST00000337002.8@SEC62	ENST00000337002.8	protein_coding	169966765,169975608,169976946,169982707,169983161,169985805,169988240,169992594	169966858,169975716,169977051,169982911,169983253,169985865,169988359,169998373	Gene ID= ENSG00000008952.16 TPM= 15.93 Transcript Type= protein_coding
chr3	169966814	169982857	169966814	169982857	+	ENST00000487736.5@SEC62	ENST00000487736.5	protein_coding	169966814,169969287,169975608,169976946,169982707	169966858,169969383,169975716,169977051,169982857	Gene ID= ENSG00000008952.16 TPM= 2.12 Transcript Type= nonsense_mediated_decay
chr3	169971070	169972268	169971070	169972268	-	transcript6340.chr3.nnic@NA	transcript6340.chr3.nnic	NA	169971070	169972268	Gene ID= novel_gene_chr3_6341 TPM= 2.12 Transcript Type= NA
chr3	170097279	170098407	170097279	170098407	+	transcript6347.chr3.nnic@NA	transcript6347.chr3.nnic	NA	170097279	170098407	Gene ID= novel_gene_chr3_6348 TPM= 2.12 Transcript Type= NA
chr3	170156790	170159272	170156790	170159272	+	transcript6345.chr3.nnic@NA	transcript6345.chr3.nnic	NA	170156790	170159272	Gene ID= novel_gene_chr3_6346 TPM= 6.37 Transcript Type= NA
chr3	170222487	170303421	170222487	170303421	+	transcript6350.chr3.nnic@PRKCI	transcript6350.chr3.nnic	protein_coding	170222487,170235230,170259969,170263379,170267915,170270421,170273286,170275229,170280227,170281166,170281882,170284461,170285770,170291854,170293383,170295911,170297304,170298995,170303040	170222770,170235351,170260058,170263429,170268000,170270561,170273340,170275287,170280403,170281263,170281968,170284596,170285886,170291941,170293508,170295990,170297393,170299110,170303421	Gene ID= ENSG00000163558.12 TPM= 2.12 Transcript Type= NA
chr3	170222365	170305981	170222365	170305981	+	ENST00000295797.4@PRKCI	ENST00000295797.4	protein_coding	170222365,170235230,170259969,170263379,170267915,170270421,170273286,170275229,170280227,170281166,170281882,170284461,170291854,170293383,170295911,170297304,170298995,170303040	170222770,170235351,170260058,170263429,170268000,170270561,170273340,170275287,170280403,170281263,170281968,170284596,170291941,170293508,170295990,170297393,170299110,170305981	Gene ID= ENSG00000163558.12 TPM= 6.37 Transcript Type= protein_coding
chr3	170366057	170369624	170366057	170369624	-	transcript6366.chr3.nnic@NA	transcript6366.chr3.nnic	NA	170366057	170369624	Gene ID= novel_gene_chr3_6367 TPM= 2.12 Transcript Type= NA
chr3	170864875	170870483	170864875	170870483	-	ENST00000295830.12@RPL22L1	ENST00000295830.12	protein_coding	170870159,170868298,170868013,170864875	170870483,170868390,170868134,170866524	Gene ID= ENSG00000163584.17 TPM= 7.44 Transcript Type= protein_coding
chr3	170866268	170870195	170866268	170870195	-	ENST00000463836.1@RPL22L1	ENST00000463836.1	protein_coding	170870159,170868298,170868013,170866268	170870195,170868387,170868134,170866524	Gene ID= ENSG00000163584.17 TPM= 11.68 Transcript Type= protein_coding
chr3	170888415	170908693	170888415	170908693	-	ENST00000295822.6@EIF5A2	ENST00000295822.6	protein_coding	170908543,170907642,170906989,170894292,170888415	170908693,170907841,170907093,170894423,170893419	Gene ID= ENSG00000163577.7 TPM= 5.31 Transcript Type= protein_coding
chr3	171058410	171061283	171058410	171061283	-	transcript6377.chr3.nnic@NA	transcript6377.chr3.nnic	NA	171058410	171061283	Gene ID= novel_gene_chr3_6378 TPM= 2.12 Transcript Type= NA
chr3	171061339	171460408	171061339	171460408	-	ENST00000436636.6@TNIK	ENST00000436636.6	protein_coding	171460007,171369620,171228165,171211116,171194525,171190697,171188702,171177326,171175252,171167095,171161270,171157460,171140399,171139470,171138191,171128714,171125912,171123596,171110714,171108065,171107183,171101449,171093839,171087342,171085118,171084155,171082251,171079518,171071223,171068848,171066576,171066187,171061339	171460408,171369685,171228221,171211241,171194635,171190787,171188832,171177380,171175330,171167270,171161336,171157664,171140509,171139556,171138379,171128878,171126151,171123702,171110877,171108162,171107206,171101633,171093968,171087506,171085229,171084325,171082394,171079652,171071323,171068997,171066735,171066326,171063964	Gene ID= ENSG00000154310.16 TPM= 3.19 Transcript Type= protein_coding
chr3	171346934	171460405	171346934	171460405	-	ENST00000465393.1@TNIK	ENST00000465393.1	protein_coding	171460007,171369620,171346934	171460405,171369685,171347218	Gene ID= ENSG00000154310.16 TPM= 1.06 Transcript Type= protein_coding
chr3	171598545	171599754	171598545	171599754	-	transcript6383.chr3.nnic@NA	transcript6383.chr3.nnic	NA	171598545	171599754	Gene ID= novel_gene_chr3_6384 TPM= 2.12 Transcript Type= NA
chr3	171602804	171771348	171602804	171771348	-	transcript6385.chr3.nic@PLD1	transcript6385.chr3.nic	protein_coding	171771195,171737892,171737532,171735492,171734865,171733444,171726018,171724696,171713893,171709560,171708755,171699745,171692332,171688676,171687371,171686685,171677566,171676715,171674500,171662060,171659213,171644910,171642840,171620386,171612279,171605299,171602804	171771348,171738082,171737659,171735637,171734970,171733509,171726076,171724788,171714045,171709709,171708838,171699826,171692442,171688876,171687584,171686798,171677694,171676833,171674613,171662170,171659301,171645023,171642889,171620520,171612432,171605416,171603302	Gene ID= ENSG00000075651.15 TPM= 2.12 Transcript Type= NA
chr3	171600826	171810494	171600826	171810494	-	ENST00000351298.8@PLD1	ENST00000351298.8	protein_coding	171810399,171737892,171737532,171735492,171734865,171733444,171726018,171724696,171713893,171709560,171708755,171699745,171692332,171688676,171687371,171686685,171677566,171676715,171674500,171662060,171659213,171644910,171642840,171620386,171612279,171605299,171600826	171810494,171738082,171737659,171735637,171734970,171733509,171726076,171724788,171714045,171709709,171708838,171699826,171692442,171688876,171687584,171686798,171677694,171676833,171674613,171662170,171659301,171645023,171642889,171620520,171612432,171605416,171603302	Gene ID= ENSG00000075651.15 TPM= 8.5 Transcript Type= protein_coding
chr3	171767277	171770909	171767277	171770909	+	transcript6388.chr3.nnic@NA	transcript6388.chr3.nnic	NA	171767277	171770909	Gene ID= novel_gene_chr3_6389 TPM= 18.06 Transcript Type= NA
chr3	172039647	172135004	172039647	172135004	+	transcript6413.chr3.nic@FNDC3B	transcript6413.chr3.nic	protein_coding	172039647,172112452,172133471	172039771,172112590,172135004	Gene ID= ENSG00000075420.12 TPM= 2.12 Transcript Type= NA
chr3	172040531	172135004	172040531	172135004	+	transcript6414.chr3.nic@FNDC3B	transcript6414.chr3.nic	protein_coding	172040531,172112452,172133471	172040624,172112590,172135004	Gene ID= ENSG00000075420.12 TPM= 5.31 Transcript Type= NA
chr3	172039628	172398771	172039628	172398771	+	ENST00000415807.6@FNDC3B	ENST00000415807.6	protein_coding	172039628,172112452,172133471,172226871,172247533,172251260,172285926,172295363,172298728,172307363,172310828,172328952,172330541,172333089,172334944,172337330,172341113,172343011,172344086,172346327,172347212,172352803,172362633,172378270,172380966,172397164	172039771,172112590,172133546,172226947,172247776,172251541,172285984,172295514,172298787,172307501,172310881,172329076,172330715,172333175,172335082,172337401,172341231,172343116,172344258,172346440,172347361,172353083,172362845,172378436,172381093,172398771	Gene ID= ENSG00000075420.12 TPM= 11.15 Transcript Type= protein_coding
chr3	172039628	172187298	172039628	172187298	+	ENST00000421757.5@FNDC3B	ENST00000421757.5	protein_coding	172039628,172112452,172133471,172186712	172039771,172112590,172133546,172187298	Gene ID= ENSG00000075420.12 TPM= 3.19 Transcript Type= protein_coding
chr3	172039659	172338324	172039659	172338324	+	ENST00000469491.5@FNDC3B	ENST00000469491.5	protein_coding	172039659,172112452,172133471,172226871,172247533,172251260,172285926,172295363,172298728,172307363,172310828,172328952,172330541,172333089,172334944,172337330	172039771,172112590,172133546,172226947,172247776,172251541,172285984,172295514,172298787,172307501,172310881,172329076,172330715,172333175,172335082,172338324	Gene ID= ENSG00000075420.12 TPM= 3.72 Transcript Type= retained_intron
chr3	172068425	172070770	172068425	172070770	-	transcript6416.chr3.nnic@NA	transcript6416.chr3.nnic	NA	172068425	172070770	Gene ID= novel_gene_chr3_6417 TPM= 11.68 Transcript Type= NA
chr3	172152580	172157567	172152580	172157567	-	transcript6418.chr3.nnic@NA	transcript6418.chr3.nnic	NA	172152580	172157567	Gene ID= novel_gene_chr3_6419 TPM= 5.31 Transcript Type= NA
chr3	172177628	172179038	172177628	172179038	-	transcript6420.chr3.nnic@NA	transcript6420.chr3.nnic	NA	172177628	172179038	Gene ID= novel_gene_chr3_6421 TPM= 5.31 Transcript Type= NA
chr3	172505508	172523507	172505508	172523507	-	ENST00000241261.6@TNFSF10	ENST00000241261.6	protein_coding	172523253,172514861,172511617,172509217,172505508	172523507,172514998,172511659,172509321,172506919	Gene ID= ENSG00000121858.10 TPM= 1.06 Transcript Type= protein_coding
chr3	172522045	172523477	172522045	172523477	+	transcript6425.chr3.nnic@NA	transcript6425.chr3.nnic	NA	172522045	172523477	Gene ID= novel_gene_chr3_6426 TPM= 2.12 Transcript Type= NA
chr3	172630249	172711218	172630249	172711218	-	ENST00000475381.5@NCEH1	ENST00000475381.5	protein_coding	172710847,172647886,172645623,172635916,172630249	172711218,172648114,172645692,172636087,172634092	Gene ID= ENSG00000144959.9 TPM= 6.37 Transcript Type= protein_coding
chr3	173818897	173822632	173818897	173822632	-	transcript6432.chr3.nnic@NA	transcript6432.chr3.nnic	NA	173818897	173822632	Gene ID= novel_gene_chr3_6433 TPM= 5.31 Transcript Type= NA
chr3	173881091	173883703	173881091	173883703	-	transcript6434.chr3.nnic@NA	transcript6434.chr3.nnic	NA	173881091	173883703	Gene ID= novel_gene_chr3_6435 TPM= 5.31 Transcript Type= NA
chr3	173892178	173894353	173892178	173894353	-	transcript6436.chr3.nnic@NA	transcript6436.chr3.nnic	NA	173892178	173894353	Gene ID= novel_gene_chr3_6437 TPM= 4.25 Transcript Type= NA
chr3	173965483	173967697	173965483	173967697	-	transcript6438.chr3.nnic@NA	transcript6438.chr3.nnic	NA	173965483	173967697	Gene ID= novel_gene_chr3_6439 TPM= 5.31 Transcript Type= NA
chr3	175096788	175256448	175096788	175256448	+	transcript6446.chr3.nic@NAALADL2	transcript6446.chr3.nic	protein_coding	175096788,175233931,175256411	175097291,175234204,175256448	Gene ID= ENSG00000177694.15 TPM= 2.12 Transcript Type= NA
chr3	177023339	177197351	177023339	177197351	-	transcript6448.chr3.nic@TBL1XR1	transcript6448.chr3.nic	protein_coding	177197121,177098466,177079827,177064920,177053773,177051504,177050478,177049997,177047486,177047300,177046129,177038313,177038098,177034198,177032971,177026373,177023339	177197351,177098541,177079945,177065022,177053918,177051726,177050610,177050138,177047549,177047397,177046189,177038434,177038172,177034325,177033136,177026474,177025524	Gene ID= ENSG00000177565.16 TPM= 6.02 Transcript Type= NA
chr3	177023339	177196483	177023339	177196483	-	transcript6450.chr3.nnic@TBL1XR1	transcript6450.chr3.nnic	protein_coding	177196340,177163978,177098466,177064920,177053773,177051504,177050478,177049997,177047486,177047300,177046129,177038313,177038098,177034198,177032971,177026373,177023339	177196483,177164001,177098541,177065022,177053918,177051726,177050610,177050138,177047549,177047397,177046189,177038434,177038172,177034325,177033136,177026474,177025524	Gene ID= ENSG00000177565.16 TPM= 10.27 Transcript Type= NA
chr3	177023339	177196607	177023339	177196607	-	transcript6459.chr3.nic@TBL1XR1	transcript6459.chr3.nic	protein_coding	177196340,177064920,177053773,177051504,177050478,177049997,177047486,177047300,177046129,177038313,177038098,177034198,177032971,177026373,177023339	177196607,177065022,177053918,177051726,177050610,177050138,177047549,177047397,177046189,177038434,177038172,177034325,177033136,177026474,177025524	Gene ID= ENSG00000177565.16 TPM= 7.08 Transcript Type= NA
chr3	177023339	177197471	177023339	177197471	-	transcript6461.chr3.nic@TBL1XR1	transcript6461.chr3.nic	protein_coding	177197121,177098466,177053773,177051504,177050478,177049997,177047486,177047300,177046129,177038313,177038098,177034198,177032971,177026373,177023339	177197471,177098541,177053918,177051726,177050610,177050138,177047549,177047397,177046189,177038434,177038172,177034325,177033136,177026474,177025524	Gene ID= ENSG00000177565.16 TPM= 7.44 Transcript Type= NA
chr3	177126001	177130156	177126001	177130156	+	transcript6468.chr3.nnic@NA	transcript6468.chr3.nnic	NA	177126001	177130156	Gene ID= novel_gene_chr3_6469 TPM= 4.25 Transcript Type= NA
chr3	177178069	177180255	177178069	177180255	+	transcript6470.chr3.nnic@NA	transcript6470.chr3.nnic	NA	177178069	177180255	Gene ID= novel_gene_chr3_6471 TPM= 10.62 Transcript Type= NA
chr3	178357019	178359834	178357019	178359834	+	transcript6477.chr3.nnic@NA	transcript6477.chr3.nnic	NA	178357019	178359834	Gene ID= novel_gene_chr3_6478 TPM= 3.19 Transcript Type= NA
chr3	178536205	178843141	178536205	178843141	+	ENST00000420517.6@KCNMB2	ENST00000420517.6	protein_coding	178536205,178795142,178807343,178825588,178828178,178842653	178536711,178795218,178807465,178825758,178828373,178843141	Gene ID= ENSG00000197584.11 TPM= 2.12 Transcript Type= protein_coding
chr3	179023739	179072215	179023739	179072215	-	ENST00000432729.5@ZMAT3	ENST00000432729.5	protein_coding	179071595,179071327,179067483,179030880,179027646,179027423,179023739	179072215,179071447,179067809,179030999,179027812,179027523,179025225	Gene ID= ENSG00000172667.10 TPM= 1.06 Transcript Type= protein_coding
chr3	179017223	179072279	179017223	179072279	-	ENST00000311417.6@ZMAT3	ENST00000311417.6	protein_coding	179071595,179067483,179030880,179027646,179027423,179017223	179072279,179067809,179030999,179027812,179027523,179025228	Gene ID= ENSG00000172667.10 TPM= 2.12 Transcript Type= protein_coding
chr3	179148348	179221156	179148348	179221156	+	transcript6494.chr3.nic@PIK3CA	transcript6494.chr3.nic	protein_coding	179148348,179198750,179199690,179201290,179203544,179204503,179209595,179210186,179210431,179218210,179219196,179219571,179219949,179220986	179148603,179199177,179199899,179201540,179203789,179204588,179209700,179210338,179210565,179218334,179219277,179219735,179220052,179221156	Gene ID= ENSG00000121879.3 TPM= 3.19 Transcript Type= NA
chr3	179148144	179148272	179148144	179148272	+	transcript6497.chr3.nnic@NA	transcript6497.chr3.nnic	NA	179148144	179148272	Gene ID= novel_gene_chr3_6498 TPM= 4.25 Transcript Type= NA
chr3	179259720	179261442	179259720	179261442	-	transcript6499.chr3.nnic@NA	transcript6499.chr3.nnic	NA	179259720	179261442	Gene ID= novel_gene_chr3_6500 TPM= 4.25 Transcript Type= NA
chr3	179322325	179323336	179322325	179323336	-	transcript6522.chr3.nnic@NA	transcript6522.chr3.nnic	NA	179322325	179323336	Gene ID= novel_gene_chr3_6523 TPM= 2.12 Transcript Type= NA
chr3	179322873	179327631	179322873	179327631	+	transcript6519.chr3.nic@ZNF639	transcript6519.chr3.nic	protein_coding	179322873,179325042,179327561	179323291,179325322,179327631	Gene ID= ENSG00000121864.9 TPM= 2.12 Transcript Type= NA
chr3	179347692	179394931	179347692	179394931	+	ENST00000471841.5@MFN1	ENST00000471841.5	protein_coding	179347692,179348845,179351900,179358840,179362358,179364297,179365118,179367439,179368036,179375220,179377042,179377344,179378341,179378585,179385569,179386433,179390004,179391981	179347810,179348963,179352035,179359002,179362482,179364405,179365225,179367592,179368103,179375341,179377168,179377448,179378443,179378814,179385721,179386629,179390138,179394931	Gene ID= ENSG00000171109.18 TPM= 15.93 Transcript Type= protein_coding
chr3	179396089	179451590	179396089	179451590	-	ENST00000232564.7@GNB4	ENST00000232564.7	protein_coding	179451346,179426144,179420889,179419399,179416493,179414885,179413715,179413412,179405190,179396089	179451590,179426242,179420927,179419505,179416556,179415047,179413781,179413613,179405406,179401319	Gene ID= ENSG00000114450.9 TPM= 8.5 Transcript Type= protein_coding
chr3	179448476	179451768	179448476	179451768	-	transcript6542.chr3.nnic@NA	transcript6542.chr3.nnic	NA	179448476	179451768	Gene ID= novel_gene_chr3_6543 TPM= 2.12 Transcript Type= NA
chr3	179562880	179588408	179562880	179588408	+	ENST00000429709.6@ACTL6A	ENST00000429709.6	protein_coding	179562880,179569824,179570067,179573369,179574370,179576217,179576620,179576824,179580640,179580894,179581140,179583353,179586546,179587930	179563117,179569900,179570241,179573469,179574467,179576311,179576726,179576913,179580701,179581008,179581220,179583448,179586632,179588408	Gene ID= ENSG00000136518.16 TPM= 28.15 Transcript Type= protein_coding
chr3	179562886	179588407	179562886	179588407	+	ENST00000450518.6@ACTL6A	ENST00000450518.6	protein_coding	179562886,179569824,179570067,179573369,179574370,179576217,179576620,179576824,179580640,179580894,179581140,179583353,179586546,179587930	179562973,179569900,179570241,179573469,179574467,179576311,179576726,179576913,179580701,179581008,179581220,179583448,179586632,179588407	Gene ID= ENSG00000136518.16 TPM= 4.78 Transcript Type= protein_coding
chr3	179582416	179604657	179582416	179604657	-	transcript6552.chr3.nnic@MRPL47	transcript6552.chr3.nnic	protein_coding	179604527,179602652,179601730,179598675,179593765,179592644,179582416	179604657,179602797,179601790,179598771,179593895,179592739,179582499	Gene ID= ENSG00000136522.13 TPM= 2.12 Transcript Type= NA
chr3	179588285	179604654	179588285	179604654	-	ENST00000476781.5@MRPL47	ENST00000476781.5	protein_coding	179604527,179602652,179601730,179598675,179593765,179592644,179588285	179604654,179602797,179601790,179598771,179593895,179592739,179588995	Gene ID= ENSG00000136522.13 TPM= 7.44 Transcript Type= protein_coding
chr3	179588831	179604649	179588831	179604649	-	ENST00000392659.2@MRPL47	ENST00000392659.2	protein_coding	179604527,179601730,179598675,179593765,179592644,179588831	179604649,179601790,179598771,179593895,179592739,179588995	Gene ID= ENSG00000136522.13 TPM= 3.19 Transcript Type= protein_coding
chr3	179604702	179624497	179604702	179624497	+	ENST00000259037.7@NDUFB5	ENST00000259037.7	protein_coding	179604702,179614971,179615983,179616983,179618415,179623920	179604939,179615059,179616049,179617044,179618521,179624497	Gene ID= ENSG00000136521.12 TPM= 120.02 Transcript Type= protein_coding
chr3	179604791	179627647	179604791	179627647	+	ENST00000493866.5@NDUFB5	ENST00000493866.5	protein_coding	179604791,179616983,179618415,179623920	179604939,179617044,179618521,179627647	Gene ID= ENSG00000136521.12 TPM= 18.06 Transcript Type= protein_coding
chr3	179652755	179789401	179652755	179789401	+	ENST00000263966.7@USP13	ENST00000263966.7	protein_coding	179652755,179681878,179690241,179701008,179706934,179708773,179719940,179721402,179730189,179730616,179740247,179742197,179745043,179752285,179754732,179757052,179761112,179764002,179765695,179781739,179784048	179653393,179682003,179690301,179701129,179707076,179708957,179720034,179721589,179730260,179730709,179740372,179742350,179745217,179752373,179754854,179757078,179761255,179764168,179765848,179781823,179789401	Gene ID= ENSG00000058056.8 TPM= 50.63 Transcript Type= protein_coding
chr3	180602130	180610978	180602130	180610978	+	ENST00000296015.8@TTC14	ENST00000296015.8	protein_coding	180602130,180602891,180603124,180604225,180604478,180604852,180605766,180606253,180606481,180607648,180608701,180609630	180602422,180603015,180603323,180604309,180604607,180605007,180605837,180606372,180606603,180607765,180608810,180610978	Gene ID= ENSG00000163728.10 TPM= 2.12 Transcript Type= protein_coding
chr3	180912463	180976579	180912463	180976579	+	transcript6609.chr3.nic@FXR1	transcript6609.chr3.nic	protein_coding	180912463,180933334,180935138,180947865,180948347,180948721,180949227,180951298,180953762,180957819,180961468,180962883,180963028,180968051,180970158,180971075,180975313,180976122	180912736,180933386,180935231,180947936,180948495,180948814,180949343,180951468,180953840,180957928,180961554,180962940,180963090,180968254,180970358,180971155,180975404,180976579	Gene ID= ENSG00000114416.17 TPM= 20.53 Transcript Type= NA
chr3	180912302	180982753	180912302	180982753	+	ENST00000357559.8@FXR1	ENST00000357559.8	protein_coding	180912302,180933334,180935138,180947865,180948347,180948721,180949227,180951298,180953762,180957819,180961468,180962883,180963028,180968051,180970158,180975313,180976122	180912736,180933386,180935231,180947936,180948495,180948814,180949343,180951468,180953840,180957928,180961554,180962940,180963090,180968254,180970358,180975404,180982753	Gene ID= ENSG00000114416.17 TPM= 5.31 Transcript Type= protein_coding
chr3	180912463	180976579	180912463	180976579	+	transcript6613.chr3.nic@FXR1	transcript6613.chr3.nic	protein_coding	180912463,180933334,180935138,180947865,180948347,180948721,180949227,180951298,180953762,180957819,180961468,180962883,180968051,180970158,180971075,180975313,180976122	180912736,180933386,180935231,180947936,180948495,180948814,180949343,180951468,180953840,180957928,180961554,180963090,180968254,180970358,180971155,180975404,180976579	Gene ID= ENSG00000114416.17 TPM= 30.09 Transcript Type= NA
chr3	180912678	180976553	180912678	180976553	+	ENST00000472339.5@FXR1	ENST00000472339.5	protein_coding	180912678,180933334,180935138,180947865,180948347,180948721,180949227,180951298,180953762,180957819,180961468,180962883,180968051,180970158,180976122	180912736,180933386,180935231,180947936,180948495,180948814,180949343,180951468,180953840,180957928,180961554,180963090,180968254,180970358,180976553	Gene ID= ENSG00000114416.17 TPM= 1.41 Transcript Type= retained_intron
chr3	180944328	180947206	180944328	180947206	-	transcript6642.chr3.nnic@NA	transcript6642.chr3.nnic	NA	180944328	180947206	Gene ID= novel_gene_chr3_6643 TPM= 2.12 Transcript Type= NA
chr3	180983709	180989773	180983709	180989773	-	ENST00000382564.6@DNAJC19	ENST00000382564.6	protein_coding	180989600,180988178,180988023,180986943,180985926,180983709	180989773,180988229,180988096,180987022,180985996,180984710	Gene ID= ENSG00000205981.6 TPM= 18.06 Transcript Type= protein_coding
chr3	180984275	180989769	180984275	180989769	-	ENST00000486355.1@DNAJC19	ENST00000486355.1	protein_coding	180989600,180988178,180988023,180986998,180985926,180984275	180989769,180988229,180988096,180987022,180985996,180984710	Gene ID= ENSG00000205981.6 TPM= 3.19 Transcript Type= protein_coding
chr3	182793500	182921635	182793500	182921635	+	ENST00000323116.9@ATP11B	ENST00000323116.9	protein_coding	182793500,182820260,182828120,182829672,182836035,182836342,182837071,182842075,182845458,182848476,182857878,182859162,182865456,182866268,182867376,182869078,182869228,182872356,182873812,182879496,182880879,182884753,182885951,182887586,182889410,182896700,182897303,182898607,182913861,182918023	182793786,182820376,182828209,182829752,182836142,182836470,182837174,182842122,182845522,182848557,182858028,182859359,182865698,182866443,182867444,182869151,182869331,182872537,182874015,182879649,182880981,182884898,182886010,182887713,182889548,182896765,182897406,182898772,182913994,182921635	Gene ID= ENSG00000058063.15 TPM= 3.19 Transcript Type= protein_coding
chr3	182938074	182980643	182938074	182980643	-	ENST00000292782.8@DCUN1D1	ENST00000292782.8	protein_coding	182980487,182965537,182963881,182961226,182947550,182947238,182938074	182980643,182965753,182964049,182961356,182947632,182947334,182945173	Gene ID= ENSG00000043093.13 TPM= 22.84 Transcript Type= protein_coding
chr3	182942776	182980538	182942776	182980538	-	ENST00000632685.1@DCUN1D1	ENST00000632685.1	protein_coding	182980487,182965537,182963881,182961226,182947550,182947238,182942776	182980538,182965753,182964049,182961356,182947632,182947334,182945173	Gene ID= ENSG00000043093.13 TPM= 4.78 Transcript Type= protein_coding
chr3	183015218	183099587	183015218	183099587	-	ENST00000265594.8@MCCC1	ENST00000265594.8	protein_coding	183099352,183094559,183092409,183086693,183072366,183071210,183070999,183057311,183052159,183045413,183041567,183039026,183037218,183033991,183025755,183022417,183020130,183017266,183015218	183099587,183094605,183092545,183086788,183072487,183071357,183071120,183057422,183052240,183045540,183041750,183039135,183037434,183034077,183025804,183022554,183020237,183017337,183015566	Gene ID= ENSG00000078070.12 TPM= 98.25 Transcript Type= protein_coding
chr3	183015218	183099554	183015218	183099554	-	transcript6662.chr3.nnic@MCCC1	transcript6662.chr3.nnic	protein_coding	183099352,183094559,183092409,183072366,183071210,183070999,183057311,183052159,183045413,183041567,183039026,183037218,183033991,183025755,183022417,183020130,183017266,183015218	183099554,183094605,183092545,183072487,183071357,183071120,183057422,183052240,183045540,183041750,183039135,183037434,183034077,183025804,183022554,183020237,183017337,183015566	Gene ID= ENSG00000078070.12 TPM= 4.78 Transcript Type= NA
chr3	183287480	183298504	183287480	183298504	+	ENST00000462559.1@B3GNT5	ENST00000462559.1	protein_coding	183287480,183296146	183287868,183298504	Gene ID= ENSG00000176597.11 TPM= 1.06 Transcript Type= processed_transcript
chr3	183447608	183456013	183447608	183456013	+	ENST00000471496.5@LINC00888	ENST00000471496.5	transcribed_unprocessed_pseudogene	183447608,183452078,183454012,183455199	183447765,183452512,183454093,183456013	Gene ID= ENSG00000240024.5 TPM= 4.25 Transcript Type= processed_transcript
chr3	183447651	183455625	183447651	183455625	+	ENST00000468380.1@LINC00888	ENST00000468380.1	transcribed_unprocessed_pseudogene	183447651,183452078,183454012,183455199	183447947,183452512,183454093,183455625	Gene ID= ENSG00000240024.5 TPM= 11.68 Transcript Type= processed_transcript
chr3	183487531	183555689	183487531	183555689	-	ENST00000341319.7@KLHL6	ENST00000341319.7	protein_coding	183555361,183527845,183508059,183499590,183494079,183492494,183487531	183555689,183528010,183508508,183499827,183494281,183492707,183492228	Gene ID= ENSG00000172578.11 TPM= 2.12 Transcript Type= protein_coding
chr3	183635623	183680937	183635623	183680937	+	transcript6684.chr3.nic@KLHL24	transcript6684.chr3.nic	protein_coding	183635623,183636221,183643480,183650296,183663458,183664921,183671034,183672296,183679086	183635747,183636311,183643542,183651276,183663642,183665039,183671222,183672484,183680937	Gene ID= ENSG00000114796.15 TPM= 3.61 Transcript Type= NA
chr3	183635623	183684477	183635623	183684477	+	ENST00000454652.6@KLHL24	ENST00000454652.6	protein_coding	183635623,183636221,183643480,183650296,183663458,183664921,183671034,183672296,183679086	183635793,183636311,183643542,183651276,183663642,183665039,183671222,183672484,183684477	Gene ID= ENSG00000114796.15 TPM= 6.8 Transcript Type= protein_coding
chr3	183635623	183679478	183635623	183679478	+	transcript6695.chr3.nic@KLHL24	transcript6695.chr3.nic	protein_coding	183635623,183643480,183650296,183663458,183664921,183671034,183672296,183679086	183635747,183643542,183651276,183663642,183665039,183671222,183672484,183679478	Gene ID= ENSG00000114796.15 TPM= 2.55 Transcript Type= NA
chr3	183635568	183679478	183635568	183679478	+	ENST00000242810.10@KLHL24	ENST00000242810.10	protein_coding	183635568,183643480,183650296,183663458,183664921,183671034,183672296,183679086	183635793,183643542,183651276,183663642,183665039,183671222,183672484,183679478	Gene ID= ENSG00000114796.15 TPM= 9.98 Transcript Type= protein_coding
chr3	183635623	183637522	183635623	183637522	+	transcript6713.chr3.nnic@KLHL24	transcript6713.chr3.nnic	protein_coding	183635623,183636221,183636543	183635793,183636311,183637522	Gene ID= ENSG00000114796.15 TPM= 3.19 Transcript Type= NA
chr3	183697818	183812625	183697818	183812625	+	ENST00000305135.9@YEATS2	ENST00000305135.9	protein_coding	183697818,183715144,183717651,183718500,183721891,183724419,183728690,183736718,183747672,183752073,183754126,183756528,183758862,183761507,183762097,183772305,183773633,183775915,183777542,183786125,183790797,183797923,183798891,183800466,183801455,183803256,183803987,183806866,183808030,183809097,183810475	183697993,183715262,183717748,183718592,183722136,183724531,183728851,183736829,183747716,183752253,183754365,183756689,183758965,183761614,183762279,183772563,183773794,183776123,183777700,183786301,183790980,183798051,183798989,183800568,183801528,183803335,183804188,183807092,183808104,183809170,183812625	Gene ID= ENSG00000163872.15 TPM= 12.75 Transcript Type= protein_coding
chr3	183824335	183884897	183824335	183884897	-	transcript6729.chr3.nnic@AC131160.1	transcript6729.chr3.nnic	protein_coding	183884722,183867865,183866625,183862753,183844231,183842298,183840570,183833724,183833492,183824335	183884897,183868060,183866765,183862801,183844326,183842447,183840640,183833825,183833589,183826732	Gene ID= ENSG00000283765.1 TPM= 5.31 Transcript Type= NA
chr3	183860815	183884897	183860815	183884897	-	transcript6740.chr3.nic@AC131160.1	transcript6740.chr3.nic	protein_coding	183884722,183867865,183866625,183860815	183884897,183868060,183866765,183862801	Gene ID= ENSG00000283765.1 TPM= 3.19 Transcript Type= NA
chr3	183815876	183825578	183815876	183825578	-	ENST00000318631.7@MAP6D1	ENST00000318631.7	protein_coding	183825147,183817994,183815876	183825578,183818111,183817436	Gene ID= ENSG00000180834.7 TPM= 6.37 Transcript Type= protein_coding
chr3	183829385	183884907	183829385	183884907	-	ENST00000317096.8@PARL	ENST00000317096.8	protein_coding	183884722,183867865,183866625,183862753,183844231,183842298,183840570,183833724,183833492,183829385	183884907,183868060,183866765,183862801,183844326,183842447,183840640,183833825,183833589,183829709	Gene ID= ENSG00000175193.13 TPM= 74.35 Transcript Type= protein_coding
chr3	183829390	183884897	183829390	183884897	-	transcript6735.chr3.nic@PARL	transcript6735.chr3.nic	protein_coding	183884722,183867865,183866625,183862753,183844231,183842298,183840570,183833492,183829390	183884897,183868060,183866765,183862801,183844326,183842447,183840640,183833589,183829709	Gene ID= ENSG00000175193.13 TPM= 3.19 Transcript Type= NA
chr3	183829390	183884888	183829390	183884888	-	ENST00000311101.9@PARL	ENST00000311101.9	protein_coding	183884722,183867865,183866625,183862753,183844231,183840570,183833724,183833492,183829390	183884888,183868060,183866765,183862801,183844326,183840640,183833825,183833589,183829709	Gene ID= ENSG00000175193.13 TPM= 6.37 Transcript Type= protein_coding
chr3	183919934	184018015	183919934	184018015	-	ENST00000334444.10@ABCC5	ENST00000334444.10	protein_coding	184017830,184014264,183989226,183988572,183987770,183982774,183982451,183981727,183978503,183977517,183971563,183967695,183965377,183965185,183963385,183961511,183959733,183953086,183951857,183951441,183949972,183949753,183947324,183945850,183942727,183937901,183928747,183927330,183925555,183919934	184018015,184014447,183989383,183988727,183987917,183983007,183982624,183981874,183978651,183977624,183971919,183967766,183965501,183965257,183963588,183961654,183959835,183953270,183952003,183951570,183950125,183949881,183947510,183945939,183942916,183938060,183928825,183927443,183925719,183921401	Gene ID= ENSG00000114770.16 TPM= 14.87 Transcript Type= protein_coding
chr3	183919934	184017934	183919934	184017934	-	transcript6746.chr3.nnic@ABCC5	transcript6746.chr3.nnic	protein_coding	184017830,184014264,183989226,183988572,183987770,183982774,183982451,183981727,183978503,183977517,183971563,183967695,183965377,183965185,183963385,183961511,183959733,183953086,183951857,183951441,183949972,183949753,183947324,183945850,183942727,183937901,183928747,183927330,183925555,183919934	184017934,184014447,183989383,183988727,183987917,183983007,183982624,183981874,183978651,183977624,183971919,183967766,183965501,183965257,183963588,183961654,183959835,183953270,183952003,183951570,183950125,183949881,183947510,183945939,183942916,183938060,183928825,183927872,183925719,183921401	Gene ID= ENSG00000114770.16 TPM= 5.31 Transcript Type= NA
chr3	183983753	184017934	183983753	184017934	-	transcript6755.chr3.nic@ABCC5	transcript6755.chr3.nic	protein_coding	184017830,184014264,183989226,183988572,183987770,183983753	184017934,184014447,183989383,183988727,183987917,183985378	Gene ID= ENSG00000114770.16 TPM= 2.92 Transcript Type= NA
chr3	183983753	184015703	183983753	184015703	-	transcript6757.chr3.nnic@ABCC5	transcript6757.chr3.nnic	protein_coding	184015559,184014264,183989226,183988572,183983753	184015703,184014447,183989383,183988727,183987917	Gene ID= ENSG00000114770.16 TPM= 5.31 Transcript Type= NA
chr3	183983753	184017863	183983753	184017863	-	ENST00000427120.6@ABCC5	ENST00000427120.6	protein_coding	184017830,184014264,183989226,183988572,183983753	184017863,184014447,183989383,183988727,183987917	Gene ID= ENSG00000114770.16 TPM= 11.68 Transcript Type= protein_coding
chr3	183983753	184017889	183983753	184017889	-	ENST00000382494.6@ABCC5	ENST00000382494.6	protein_coding	184017830,184014264,183989226,183988572,183987770,183985304,183983753	184017889,184014447,183989383,183988727,183987917,183985378,183984894	Gene ID= ENSG00000114770.16 TPM= 5.05 Transcript Type= protein_coding
chr3	183983753	184017889	183983753	184017889	-	ENST00000443376.5@ABCC5	ENST00000443376.5	protein_coding	184017830,184014264,183989226,183988572,183987770,183985304,183983753	184017889,184014447,183989383,183988727,183987917,183985455,183984894	Gene ID= ENSG00000114770.16 TPM= 5.05 Transcript Type= nonsense_mediated_decay
chr3	183983753	184017889	183983753	184017889	-	ENST00000392579.6@ABCC5	ENST00000392579.6	protein_coding	184017830,184014264,183989226,183988572,183987770,183983753	184017889,184014447,183989383,183988727,183987917,183984894	Gene ID= ENSG00000114770.16 TPM= 1.86 Transcript Type= protein_coding
chr3	184000272	184004226	184000272	184004226	+	transcript6763.chr3.nnic@NA	transcript6763.chr3.nnic	NA	184000272	184004226	Gene ID= novel_gene_chr3_6764 TPM= 2.12 Transcript Type= NA
chr3	184134019	184135238	184134019	184135238	-	ENST00000608135.1@AC131235.3	ENST00000608135.1	antisense_RNA	184135195,184134536,184134019	184135238,184134593,184134278	Gene ID= ENSG00000272721.5 TPM= 1.06 Transcript Type= antisense_RNA
chr3	184135264	184145310	184135264	184145310	+	ENST00000273783.7@EIF2B5	ENST00000273783.7	protein_coding	184135264,184136612,184137620,184137898,184138166,184140080,184140418,184141925,184142237,184142502,184142779,184143052,184143442,184144099,184144597,184144884	184135580,184136736,184137805,184138075,184138246,184140157,184140730,184142070,184142378,184142603,184142886,184143142,184143565,184144224,184144707,184145310	Gene ID= ENSG00000145191.12 TPM= 73.29 Transcript Type= protein_coding
chr3	184155304	184170876	184155304	184170876	+	transcript6790.chr3.nnic@DVL3	transcript6790.chr3.nnic	protein_coding	184155304,184163657,184164267,184164492,184164796,184165113,184165422,184166126,184166446,184166606,184167580,184167898,184170006,184170319	184155796,184163726,184164388,184164601,184164931,184165206,184165491,184166265,184166522,184166673,184167711,184168065,184170221,184170876	Gene ID= ENSG00000161202.17 TPM= 23.9 Transcript Type= NA
chr3	184155388	184173610	184155388	184173610	+	ENST00000313143.7@DVL3	ENST00000313143.7	protein_coding	184155388,184163657,184164267,184164492,184164796,184165113,184165422,184166126,184166446,184166606,184166826,184167580,184167898,184170006,184170319	184155796,184163726,184164388,184164601,184164931,184165206,184165491,184166265,184166522,184166673,184166975,184167711,184168065,184170221,184173610	Gene ID= ENSG00000161202.17 TPM= 49.39 Transcript Type= protein_coding
chr3	184174689	184184091	184174689	184184091	+	ENST00000382456.7@AP2M1	ENST00000382456.7	protein_coding	184174689,184176951,184178857,184180169,184180849,184181085,184181696,184181912,184182151,184182757,184183482	184174959,184177067,184179122,184180251,184180984,184181226,184181815,184182047,184182248,184182868,184184091	Gene ID= ENSG00000161203.13 TPM= 836.45 Transcript Type= protein_coding
chr3	184174797	184184091	184174797	184184091	+	transcript6826.chr3.nic@AP2M1	transcript6826.chr3.nic	protein_coding	184174797,184176951,184178857,184180169,184180849,184181085,184181696,184181912,184182151,184182757	184174959,184177067,184179122,184180251,184180984,184181226,184181815,184182047,184182248,184184091	Gene ID= ENSG00000161203.13 TPM= 24.43 Transcript Type= NA
chr3	184186023	184194007	184186023	184194007	+	ENST00000429586.6@ABCF3	ENST00000429586.6	protein_coding	184186023,184186507,184186796,184187397,184187664,184187861,184188141,184188761,184188929,184189088,184189255,184189388,184189557,184189855,184190999,184191123,184192601,184192805,184193102,184193365,184193540	184186280,184186654,184186875,184187443,184187761,184187983,184188407,184188841,184188988,184189144,184189277,184189443,184189757,184189931,184191043,184191255,184192689,184192896,184193234,184193452,184194007	Gene ID= ENSG00000161204.11 TPM= 132.27 Transcript Type= protein_coding
chr3	184186174	184194005	184186174	184194005	+	ENST00000292808.5@ABCF3	ENST00000292808.5	protein_coding	184186174,184186507,184186796,184187397,184187664,184187861,184188141,184188761,184188929,184189088,184189255,184189388,184189557,184189855,184190999,184191123,184192601,184192805,184193102,184193365,184193540	184186280,184186636,184186875,184187443,184187761,184187983,184188407,184188841,184188988,184189144,184189277,184189443,184189757,184189931,184191043,184191255,184192689,184192896,184193234,184193452,184194005	Gene ID= ENSG00000161204.11 TPM= 2.69 Transcript Type= protein_coding
chr3	184242425	184248963	184242425	184248963	-	transcript6843.chr3.nic@ALG3	transcript6843.chr3.nic	protein_coding	184248782,184245713,184245468,184245198,184244601,184243791,184243554,184242813,184242425	184248963,184245812,184245615,184245358,184244721,184243996,184243630,184242957,184242676	Gene ID= ENSG00000214160.9 TPM= 7.44 Transcript Type= NA
chr3	184242425	184249548	184242425	184249548	-	ENST00000445626.6@ALG3	ENST00000445626.6	protein_coding	184249226,184245713,184245468,184245198,184244601,184243791,184243554,184242813,184242425	184249548,184245812,184245615,184245358,184244721,184243996,184243630,184242957,184242676	Gene ID= ENSG00000214160.9 TPM= 1.06 Transcript Type= protein_coding
chr3	184242334	184248971	184242334	184248971	-	ENST00000397676.7@ALG3	ENST00000397676.7	protein_coding	184248745,184245713,184245468,184245198,184244601,184243791,184243554,184242813,184242334	184248971,184245812,184245615,184245358,184244721,184243996,184243630,184242957,184242676	Gene ID= ENSG00000214160.9 TPM= 2.12 Transcript Type= protein_coding
chr3	184249650	184259585	184249650	184259585	+	ENST00000324557.8@ECE2	ENST00000324557.8	protein_coding	184249650,184257473,184258288	184249890,184257756,184259585	Gene ID= ENSG00000145194.17 TPM= 5.31 Transcript Type= protein_coding
chr3	184298709	184309054	184298709	184309054	+	ENST00000310118.8@PSMD2	ENST00000310118.8	protein_coding	184298709,184299851,184300280,184301537,184301847,184302370,184302679,184303002,184303320,184303643,184303947,184304304,184305768,184306054,184306350,184306751,184307357,184307614,184307890,184308449,184308708	184299401,184299907,184300444,184301658,184302071,184302528,184302823,184303062,184303466,184303749,184304074,184304391,184305930,184306155,184306495,184306834,184307525,184307708,184308016,184308567,184309054	Gene ID= ENSG00000175166.16 TPM= 530.37 Transcript Type= protein_coding
chr3	184314495	184335353	184314495	184335353	+	ENST00000346169.6@EIF4G1	ENST00000346169.6	protein_coding	184314495,184315489,184315763,184316132,184317321,184317717,184319689,184320630,184320927,184321282,184322362,184322544,184322821,184323083,184323408,184323780,184324201,184324878,184325269,184325480,184325851,184326527,184326881,184327216,184327586,184327830,184328631,184328909,184331266,184331472,184331728,184331946,184334727	184314674,184315545,184315856,184316218,184317497,184317816,184319801,184320722,184320993,184322103,184322450,184322730,184322954,184323241,184323593,184323977,184324347,184325114,184325373,184325639,184325951,184326629,184326983,184327448,184327704,184328002,184328756,184328990,184331364,184331606,184331809,184332086,184335353	Gene ID= ENSG00000114867.20 TPM= 46.78 Transcript Type= protein_coding
chr3	184314495	184335357	184314495	184335357	+	ENST00000352767.7@EIF4G1	ENST00000352767.7	protein_coding	184314495,184315763,184316132,184316713,184317321,184317717,184319689,184320630,184320927,184321282,184322362,184322544,184322821,184323083,184323408,184323780,184324201,184324878,184325269,184325480,184325851,184326527,184326881,184327216,184327586,184327830,184328631,184328909,184331266,184331472,184331728,184331946,184334727	184314674,184315856,184316218,184316733,184317497,184317816,184319801,184320722,184320993,184322103,184322450,184322730,184322954,184323241,184323593,184323977,184324347,184325114,184325373,184325639,184325951,184326629,184326983,184327448,184327704,184328002,184328756,184328990,184331364,184331606,184331809,184332086,184335357	Gene ID= ENSG00000114867.20 TPM= 24.51 Transcript Type= protein_coding
chr3	184314542	184335351	184314542	184335351	+	ENST00000392537.6@EIF4G1	ENST00000392537.6	protein_coding	184314542,184317321,184317717,184319689,184320630,184320927,184321282,184322362,184322544,184322821,184323083,184323408,184323780,184324201,184324878,184325269,184325480,184325851,184326527,184326881,184327216,184327586,184327830,184328631,184328909,184331266,184331472,184331728,184331946,184334727	184314674,184317497,184317816,184319801,184320722,184320993,184322103,184322450,184322730,184322954,184323241,184323593,184323977,184324347,184325114,184325373,184325639,184325951,184326629,184326983,184327448,184327704,184328002,184328756,184328990,184331364,184331606,184331809,184332086,184335351	Gene ID= ENSG00000114867.20 TPM= 46.25 Transcript Type= protein_coding
chr3	184314544	184325299	184314544	184325299	+	transcript6894.chr3.nic@EIF4G1	transcript6894.chr3.nic	protein_coding	184314544,184315763,184316132,184317321,184317717,184319689,184320630,184320927,184321282,184322362,184322544,184322821,184323083,184323408,184323780,184324201,184324878,184325269	184314674,184315856,184316218,184317497,184317816,184319801,184320722,184320993,184322103,184322450,184322730,184322954,184323241,184323593,184323977,184324347,184325114,184325299	Gene ID= ENSG00000114867.20 TPM= 24.36 Transcript Type= NA
chr3	184314502	184335353	184314502	184335353	+	ENST00000414031.5@EIF4G1	ENST00000414031.5	protein_coding	184314502,184315489,184315763,184316072,184317321,184317717,184319689,184320630,184320927,184321282,184322362,184322544,184322821,184323083,184323408,184323780,184324201,184324878,184325269,184325480,184325851,184326527,184326881,184327216,184327586,184327830,184328631,184328909,184331266,184331472,184331728,184331946,184334727	184314674,184315545,184315856,184316218,184317497,184317816,184319801,184320722,184320993,184322103,184322450,184322730,184322954,184323241,184323593,184323977,184324347,184325114,184325373,184325639,184325951,184326629,184326983,184327448,184327704,184328002,184328756,184328990,184331364,184331606,184331809,184332086,184335353	Gene ID= ENSG00000114867.20 TPM= 21.82 Transcript Type= protein_coding
chr3	184314606	184335353	184314606	184335353	+	ENST00000350481.9@EIF4G1	ENST00000350481.9	protein_coding	184314606,184317717,184319689,184320630,184320927,184321282,184322362,184322544,184322821,184323083,184323408,184323780,184324201,184324878,184325269,184325480,184325851,184326527,184326881,184327216,184327586,184327830,184328631,184328909,184331266,184331472,184331728,184331946,184334727	184314674,184317816,184319801,184320722,184320993,184322103,184322450,184322730,184322954,184323241,184323593,184323977,184324347,184325114,184325373,184325639,184325951,184326629,184326983,184327448,184327704,184328002,184328756,184328990,184331364,184331606,184331809,184332086,184335353	Gene ID= ENSG00000114867.20 TPM= 21.67 Transcript Type= protein_coding
chr3	184314567	184335017	184314567	184335017	+	ENST00000382330.7@EIF4G1	ENST00000382330.7	protein_coding	184314567,184315489,184315763,184316132,184316713,184317321,184317717,184319689,184320630,184320927,184321282,184322362,184322544,184322821,184323083,184323408,184323780,184324201,184324878,184325269,184325480,184325851,184326527,184326881,184327216,184327586,184327830,184328631,184328909,184331266,184331472,184331728,184331946,184334727	184314674,184315545,184315856,184316218,184316733,184317497,184317816,184319801,184320722,184320993,184322103,184322450,184322730,184322954,184323241,184323593,184323977,184324347,184325114,184325373,184325639,184325951,184326629,184326983,184327448,184327704,184328002,184328756,184328990,184331364,184331606,184331809,184332086,184335017	Gene ID= ENSG00000114867.20 TPM= 16.9 Transcript Type= protein_coding
chr3	184335918	184346273	184335918	184346273	+	transcript6902.chr3.nic@FAM131A	transcript6902.chr3.nic	protein_coding	184335918,184337311,184338387,184341724,184342066,184342744,184344495	184336123,184337718,184338529,184341817,184342248,184342860,184346273	Gene ID= ENSG00000175182.14 TPM= 30.27 Transcript Type= NA
chr3	184335937	184346273	184335937	184346273	+	ENST00000340957.9@FAM131A	ENST00000340957.9	protein_coding	184335937,184337311,184341724,184342066,184342744,184344495	184336123,184337371,184341817,184342248,184342860,184346273	Gene ID= ENSG00000175182.14 TPM= 48.33 Transcript Type= protein_coding
chr3	184346185	184361651	184346185	184361651	-	ENST00000265593.8@CLCN2	ENST00000265593.8	protein_coding	184361417,184358975,184358682,184358182,184357962,184357779,184357620,184357362,184357182,184356993,184355694,184355374,184354904,184354548,184354101,184353662,184353250,184353033,184352737,184352443,184352293,184352013,184346935,184346185	184361651,184359131,184358813,184358310,184358095,184357856,184357698,184357487,184357266,184357094,184355778,184355529,184354973,184354658,184354314,184353795,184353422,184353147,184352810,184352496,184352331,184352117,184347021,184346800	Gene ID= ENSG00000114859.15 TPM= 2.12 Transcript Type= protein_coding
chr3	184361718	184368594	184361718	184368594	+	ENST00000456318.5@POLR2H	ENST00000456318.5	protein_coding	184361718,184362873,184364966,184365133,184366717,184368177	184362146,184363565,184365049,184365226,184366800,184368594	Gene ID= ENSG00000163882.9 TPM= 9.56 Transcript Type= protein_coding
chr3	184361789	184368550	184361789	184368550	+	ENST00000438240.5@POLR2H	ENST00000438240.5	protein_coding	184361789,184364966,184365133,184366717,184368177	184362146,184365049,184365226,184366800,184368550	Gene ID= ENSG00000163882.9 TPM= 1.06 Transcript Type= protein_coding
chr3	184363403	184368533	184363403	184368533	+	ENST00000452961.5@POLR2H	ENST00000452961.5	protein_coding	184363403,184364966,184365133,184366717,184368177	184363574,184365049,184365226,184366800,184368533	Gene ID= ENSG00000163882.9 TPM= 7.44 Transcript Type= protein_coding
chr3	184363434	184368596	184363434	184368596	+	ENST00000429568.1@POLR2H	ENST00000429568.1	protein_coding	184363434,184364966,184365133,184366717,184368113	184363565,184365049,184365226,184366800,184368596	Gene ID= ENSG00000163882.9 TPM= 1.06 Transcript Type= protein_coding
chr3	184380321	184390736	184380321	184390736	+	ENST00000470150.5@CHRD	ENST00000470150.5	protein_coding	184380321,184380692,184381235,184381496,184381716,184381933,184382389,184382634,184383312,184383523,184384537,184385018,184386046,184386492,184386845,184387051,184387931,184388587,184388893,184389367	184380466,184380795,184381364,184381624,184381815,184382020,184382530,184383163,184383418,184383642,184384693,184385238,184386159,184386755,184386938,184387107,184388033,184388741,184388995,184390736	Gene ID= ENSG00000090539.15 TPM= 1.06 Transcript Type= retained_intron
chr3	184561784	184582409	184561784	184582409	+	ENST00000330394.2@EPHB3	ENST00000330394.2	protein_coding	184561784,184571318,184572504,184575830,184576842,184577343,184577658,184577898,184578414,184579477,184579687,184580402,184580729,184580972,184581253,184581514	184562353,184571382,184573176,184575985,184577183,184577467,184577817,184578006,184578466,184579599,184579934,184580617,184580878,184581165,184581408,184582409	Gene ID= ENSG00000182580.2 TPM= 5.31 Transcript Type= protein_coding
chr3	184599556	184601485	184599556	184601485	+	transcript6922.chr3.nnic@NA	transcript6922.chr3.nnic	NA	184599556	184601485	Gene ID= novel_gene_chr3_6923 TPM= 2.12 Transcript Type= NA
chr3	184710367	184712002	184710367	184712002	-	ENST00000317897.4@MAGEF1	ENST00000317897.4	protein_coding	184710367	184712002	Gene ID= ENSG00000177383.4 TPM= 72.23 Transcript Type= protein_coding
chr3	184812171	185052612	184812171	185052612	+	ENST00000436792.6@VPS8	ENST00000436792.6	protein_coding	184812171,184824545,184826163,184832689,184834649,184838714,184839698,184849071,184849936,184852500,184853857,184854114,184855711,184859985,184862897,184866876,184868024,184868946,184869482,184870716,184886110,184894703,184898565,184900921,184913519,184914981,184915355,184920127,184924862,184926594,184928451,184929580,184930470,184936246,184940197,184957374,184964468,184966671,184971649,184982566,184983012,184993983,184996332,184999696,185024336,185048479,185051876	184812225,184824785,184826231,184832819,184834742,184838746,184839752,184849195,184850022,184852567,184854010,184854173,184855818,184860065,184863067,184866950,184868059,184869036,184869528,184870805,184886156,184894925,184898654,184900972,184913561,184915053,184915474,184920198,184924981,184926650,184928533,184929664,184930568,184936335,184940243,184957521,184964557,184966713,184971752,184982647,184983094,184994063,184996501,184999861,185024389,185048559,185052612	Gene ID= ENSG00000156931.15 TPM= 37.18 Transcript Type= protein_coding
chr3	184824545	184840537	184824545	184840537	+	ENST00000424463.4@VPS8	ENST00000424463.4	protein_coding	184824545,184826163,184832689,184834649,184838714	184824785,184826231,184832819,184834742,184840537	Gene ID= ENSG00000156931.15 TPM= 1.06 Transcript Type= protein_coding
chr3	185190624	185254098	185190624	185254098	-	ENST00000231887.7@EHHADH	ENST00000231887.7	protein_coding	185253949,185248414,185235290,185229432,185218136,185204416,185190624	185254098,185248517,185235462,185229543,185218240,185204757,185193487	Gene ID= ENSG00000113790.10 TPM= 13.81 Transcript Type= protein_coding
chr3	185282941	185293079	185282941	185293079	+	ENST00000448876.5@MAP3K13	ENST00000448876.5	protein_coding	185282941,185285517,185291613	185283027,185285643,185293079	Gene ID= ENSG00000073803.13 TPM= 10.62 Transcript Type= protein_coding
chr3	185489601	185499057	185489601	185499057	-	ENST00000421852.5@TMEM41A	ENST00000421852.5	protein_coding	185498843,185496828,185495154,185494623,185489601	185499057,185496981,185495315,185494761,185491757	Gene ID= ENSG00000163900.10 TPM= 5.31 Transcript Type= protein_coding
chr3	185586314	185631101	185586314	185631101	+	transcript6956.chr3.nnic@SENP2	transcript6956.chr3.nnic	protein_coding	185586314,185590114,185598412,185598958,185600765,185606330,185609247,185611651,185612607,185613345,185614564,185617480,185619299,185621826,185623998,185626298,185629782,185630436	185586514,185590169,185598545,185599024,185600855,185606498,185609350,185611745,185612658,185613408,185614740,185617611,185619502,185621905,185624082,185626393,185629952,185631101	Gene ID= ENSG00000163904.12 TPM= 3.19 Transcript Type= NA
chr3	185586214	185631101	185586214	185631101	+	transcript6958.chr3.nnic@SENP2	transcript6958.chr3.nnic	protein_coding	185586214,185590114,185598412,185598958,185600765,185606330,185609247,185611651,185612607,185613345,185614564,185617480,185619299,185621826,185623998,185626298,185629782	185586514,185590169,185598497,185599024,185600855,185606498,185609350,185611745,185612658,185613408,185614740,185617611,185619502,185621905,185624082,185626393,185631101	Gene ID= ENSG00000163904.12 TPM= 3.19 Transcript Type= NA
chr3	185586174	185633551	185586174	185633551	+	ENST00000296257.9@SENP2	ENST00000296257.9	protein_coding	185586174,185590114,185598412,185598958,185600765,185606330,185609247,185611651,185612607,185613345,185614564,185617480,185619299,185621826,185623998,185626298,185629782	185586514,185590169,185598545,185599024,185600855,185606498,185609350,185611745,185612658,185613408,185614740,185617611,185619502,185621905,185624082,185626393,185633551	Gene ID= ENSG00000163904.12 TPM= 1.06 Transcript Type= protein_coding
chr3	185586214	185631101	185586214	185631101	+	transcript6963.chr3.nic@SENP2	transcript6963.chr3.nic	protein_coding	185586214,185590114,185598412,185598992,185600765,185606330,185609247,185611651,185612607,185613345,185614564,185617480,185619299,185621826,185623998,185626298,185629782	185586514,185590169,185598545,185599024,185600855,185606498,185609350,185611745,185612658,185613408,185614740,185617611,185619502,185621905,185624082,185626393,185631101	Gene ID= ENSG00000163904.12 TPM= 4.25 Transcript Type= NA
chr3	185595799	185596818	185595799	185596818	-	transcript6967.chr3.nnic@NA	transcript6967.chr3.nnic	NA	185595799	185596818	Gene ID= novel_gene_chr3_6968 TPM= 4.25 Transcript Type= NA
chr3	185643739	185825056	185643739	185825056	-	ENST00000382199.6@IGF2BP2	ENST00000382199.6	protein_coding	185824783,185823153,185698299,185696612,185692699,185689355,185687057,185675791,185675296,185672541,185658341,185657286,185652094,185649403,185647025,185643739	185825056,185823213,185698347,185696663,185692762,185689627,185687191,185675913,185675431,185672669,185658409,185657402,185652168,185649534,185647138,185645623	Gene ID= ENSG00000073792.15 TPM= 7.44 Transcript Type= protein_coding
chr3	185643975	185825024	185643975	185825024	-	ENST00000346192.7@IGF2BP2	ENST00000346192.7	protein_coding	185824783,185823153,185698299,185696612,185692699,185689355,185687057,185675791,185675296,185658341,185657286,185652094,185649403,185647025,185643975	185825024,185823213,185698347,185696663,185692762,185689627,185687191,185675913,185675431,185658409,185657402,185652168,185649534,185647138,185645623	Gene ID= ENSG00000073792.15 TPM= 3.19 Transcript Type= protein_coding
chr3	185915906	185938136	185915906	185938136	-	ENST00000453386.6@TRA2B	ENST00000453386.6	protein_coding	185937825,185926601,185925464,185923796,185922011,185921104,185919437,185918365,185915906	185938136,185926734,185925626,185923984,185922126,185921187,185919496,185918438,185917725	Gene ID= ENSG00000136527.17 TPM= 10.62 Transcript Type= protein_coding
chr3	185917330	185938029	185917330	185938029	-	ENST00000456380.5@TRA2B	ENST00000456380.5	protein_coding	185937825,185931577,185926601,185925464,185923796,185922011,185921104,185919437,185918365,185917330	185938029,185931852,185926734,185925626,185923984,185922126,185921187,185919496,185918438,185917725	Gene ID= ENSG00000136527.17 TPM= 1.06 Transcript Type= nonsense_mediated_decay
chr3	186046308	186109112	186046308	186109112	-	ENST00000306376.9@ETV5	ENST00000306376.9	protein_coding	186108940,186105824,186105625,186105449,186105305,186081046,186079817,186065813,186064417,186057423,186057075,186052030,186046308	186109112,186105942,186105712,186105496,186105355,186081175,186080104,186066072,186064476,186057491,186057244,186052131,186048860	Gene ID= ENSG00000244405.7 TPM= 5.31 Transcript Type= protein_coding
chr3	186095120	186109081	186095120	186109081	-	ENST00000476890.1@ETV5	ENST00000476890.1	protein_coding	186108940,186105824,186105625,186105449,186105305,186095120	186109081,186105942,186105712,186105496,186105355,186095313	Gene ID= ENSG00000244405.7 TPM= 1.06 Transcript Type= processed_transcript
chr3	186277144	186362070	186277144	186362070	-	transcript6999.chr3.nic@DGKG	transcript6999.chr3.nic	protein_coding	186361946,186320393,186306901,186298064,186297421,186288710,186284660,186280670,186277144	186362070,186320707,186306977,186298229,186297483,186288880,186284709,186280744,186279973	Gene ID= ENSG00000058866.14 TPM= 4.25 Transcript Type= NA
chr3	186147201	186362237	186147201	186362237	-	ENST00000265022.7@DGKG	ENST00000265022.7	protein_coding	186361946,186320393,186306901,186298064,186297421,186288710,186284660,186280670,186279851,186275547,186272255,186268801,186267685,186265247,186261699,186260439,186257854,186253093,186251759,186242504,186211795,186188202,186164898,186161603,186147201	186362237,186320707,186306977,186298229,186297483,186288880,186284709,186280744,186279973,186275664,186272343,186268917,186267777,186265306,186261778,186260513,186257939,186253182,186251919,186242568,186211885,186188379,186165018,186161663,186150188	Gene ID= ENSG00000058866.14 TPM= 9.56 Transcript Type= protein_coding
chr3	186358661	186362234	186358661	186362234	-	transcript7004.chr3.nnic@NA	transcript7004.chr3.nnic	NA	186358661	186362234	Gene ID= novel_gene_chr3_7005 TPM= 3.19 Transcript Type= NA
chr3	186546339	186567352	186546339	186567352	-	ENST00000338733.9@TBCCD1	ENST00000338733.9	protein_coding	186567267,186563994,186558417,186556409,186554898,186554254,186551129,186546339	186567352,186564372,186558572,186556775,186555084,186554751,186551279,186546955	Gene ID= ENSG00000113838.12 TPM= 11.68 Transcript Type= protein_coding
chr3	186567403	186585800	186567403	186585800	+	ENST00000439351.5@DNAJB11	ENST00000439351.5	protein_coding	186567403,186570163,186572095,186575840,186577668,186581371,186581995,186582716,186583865,186584430,186585344	186567596,186570965,186572251,186575937,186577800,186581513,186582077,186582773,186583976,186584589,186585800	Gene ID= ENSG00000090520.11 TPM= 32.4 Transcript Type= protein_coding
chr3	186570678	186585799	186570678	186585799	+	ENST00000265028.7@DNAJB11	ENST00000265028.7	protein_coding	186570678,186572095,186575840,186577668,186581371,186581995,186582716,186583865,186584430,186585344	186570965,186572251,186575937,186577800,186581513,186582077,186582773,186583976,186584589,186585799	Gene ID= ENSG00000090520.11 TPM= 47.27 Transcript Type= protein_coding
chr3	186783577	186789893	186783577	186789893	+	transcript7027.chr3.nic@EIF4A2	transcript7027.chr3.nic	protein_coding	186783577,186784432,186784564,186784962,186785883,186786164,186786502,186787127,186787495,186787803	186783639,186784477,186784696,186785101,186786051,186786273,186786645,186787264,186787584,186789893	Gene ID= ENSG00000156976.16 TPM= 11.68 Transcript Type= NA
chr3	186783577	186789897	186783577	186789897	+	ENST00000440191.6@EIF4A2	ENST00000440191.6	protein_coding	186783577,186784429,186784564,186784962,186785883,186786164,186786502,186787127,186787495,186787803,186789125	186783639,186784477,186784696,186785101,186786051,186786273,186786645,186787264,186787584,186787882,186789897	Gene ID= ENSG00000156976.16 TPM= 108.85 Transcript Type= protein_coding
chr3	186783577	186789881	186783577	186789881	+	ENST00000425053.5@EIF4A2	ENST00000425053.5	protein_coding	186783577,186784432,186784564,186784962,186785883,186786164,186786502,186787127,186787495,186787803,186788310,186789125	186783639,186784477,186784696,186785101,186786051,186786273,186786645,186787264,186787584,186787882,186788416,186789881	Gene ID= ENSG00000156976.16 TPM= 6.8 Transcript Type= nonsense_mediated_decay
chr3	186789900	186806501	186789900	186806501	-	ENST00000296273.6@RFC4	ENST00000296273.6	protein_coding	186806290,186804583,186801117,186797535,186794658,186792804,186792490,186791725,186790326,186790142,186789900	186806501,186804724,186801195,186797614,186794777,186792947,186792610,186791850,186790406,186790255,186790064	Gene ID= ENSG00000163918.10 TPM= 5.31 Transcript Type= protein_coding
chr3	186930485	187078553	186930485	187078553	+	ENST00000169298.7@ST6GAL1	ENST00000169298.7	protein_coding	186930485,186963785,187038742,187042654,187051249,187072849,187074159,187075562	186930834,186963926,187038873,187043310,187051346,187072947,187074333,187078553	Gene ID= ENSG00000073849.14 TPM= 33.99 Transcript Type= protein_coding
chr3	186931316	187078553	186931316	187078553	+	transcript7044.chr3.nic@ST6GAL1	transcript7044.chr3.nic	protein_coding	186931316,186963785,187038742,187042654,187051249,187072849,187074159,187075562	186931394,186963926,187038873,187043310,187051346,187072947,187074333,187078553	Gene ID= ENSG00000073849.14 TPM= 22.31 Transcript Type= NA
chr3	187120948	187139523	187120948	187139523	-	ENST00000296277.8@RPL39L	ENST00000296277.8	protein_coding	187139213,187127999,187120948	187139523,187128062,187121328	Gene ID= ENSG00000163923.9 TPM= 3.19 Transcript Type= protein_coding
chr3	187246361	187291957	187246361	187291957	-	ENST00000169293.10@MASP1	ENST00000169293.10	protein_coding	187291628,187285825,187262543,187260741,187256664,187253168,187251634,187250251,187246361	187291957,187286056,187262720,187260872,187256860,187253315,187251752,187250329,187247385	Gene ID= ENSG00000127241.16 TPM= 10.09 Transcript Type= protein_coding
chr3	187246361	187291852	187246361	187291852	-	transcript7065.chr3.nic@MASP1	transcript7065.chr3.nic	protein_coding	187291628,187262543,187260741,187256664,187253168,187251634,187250251,187246361	187291852,187262720,187260872,187256860,187253315,187251752,187250329,187247385	Gene ID= ENSG00000127241.16 TPM= 3.72 Transcript Type= NA
chr3	187721377	187745727	187721377	187745727	-	ENST00000406870.6@BCL6	ENST00000406870.6	protein_coding	187745410,187734869,187733533,187731709,187729050,187728360,187726731,187725499,187724941,187721377	187745727,187734907,187733703,187731930,187730021,187728544,187726898,187725629,187725078,187722601	Gene ID= ENSG00000113916.17 TPM= 40.36 Transcript Type= protein_coding
chr3	187737913	187738942	187737913	187738942	-	transcript7076.chr3.nnic@NA	transcript7076.chr3.nnic	NA	187737913	187738942	Gene ID= novel_gene_chr3_7077 TPM= 2.12 Transcript Type= NA
chr3	188151206	188154057	188151206	188154057	-	ENST00000605573.1@LPP-AS2	ENST00000605573.1	antisense_RNA	188151206	188154057	Gene ID= ENSG00000270959.1 TPM= 3.19 Transcript Type= antisense_RNA
chr3	188154203	188877704	188154203	188877704	+	transcript7081.chr3.nnic@LPP	transcript7081.chr3.nnic	protein_coding	188154203,188335114,188341663,188406112,188484592,188524665,188609161,188708267,188760113,188866200,188872643,188874351	188154252,188335197,188341719,188406313,188484704,188524787,188609844,188708393,188760282,188866378,188872763,188877704	Gene ID= ENSG00000145012.13 TPM= 2.66 Transcript Type= NA
chr3	188153945	188878775	188153945	188878775	+	transcript7084.chr3.nic@LPP	transcript7084.chr3.nic	protein_coding	188153945,188225405,188406112,188484592,188524665,188609161,188708267,188760113,188866200,188872643,188874351	188154021,188225527,188406313,188484704,188524787,188609844,188708393,188760282,188866378,188872763,188878775	Gene ID= ENSG00000145012.13 TPM= 19.65 Transcript Type= NA
chr3	188167592	188168968	188167592	188168968	-	transcript7098.chr3.nnic@NA	transcript7098.chr3.nnic	NA	188167592	188168968	Gene ID= novel_gene_chr3_7099 TPM= 2.12 Transcript Type= NA
chr3	188174222	188177631	188174222	188177631	-	transcript7102.chr3.nnic@NA	transcript7102.chr3.nnic	NA	188174222	188177631	Gene ID= novel_gene_chr3_7103 TPM= 4.25 Transcript Type= NA
chr3	188407790	188409251	188407790	188409251	-	transcript7100.chr3.nnic@NA	transcript7100.chr3.nnic	NA	188407790	188409251	Gene ID= novel_gene_chr3_7101 TPM= 13.81 Transcript Type= NA
chr3	188623260	188628449	188623260	188628449	-	transcript7096.chr3.nnic@NA	transcript7096.chr3.nnic	NA	188623260	188628449	Gene ID= novel_gene_chr3_7097 TPM= 3.19 Transcript Type= NA
chr3	188634525	188637635	188634525	188637635	+	transcript7094.chr3.nnic@NA	transcript7094.chr3.nnic	NA	188634525	188637635	Gene ID= novel_gene_chr3_7095 TPM= 3.19 Transcript Type= NA
chr3	189956728	190120929	189956728	190120929	-	ENST00000319332.9@P3H2	ENST00000319332.9	protein_coding	190120252,189995290,189994094,189988907,189987527,189986788,189984550,189983046,189974558,189973909,189972874,189971890,189970816,189963958,189956728	190120929,189995442,189994283,189989038,189987669,189986877,189984590,189983140,189974685,189974004,189973024,189972007,189970891,189964098,189958004	Gene ID= ENSG00000090530.9 TPM= 14.87 Transcript Type= protein_coding
chr3	190305701	190322475	190305701	190322475	-	ENST00000295522.3@CLDN1	ENST00000295522.3	protein_coding	190321984,190312872,190310169,190305701	190322475,190313036,190310253,190308439	Gene ID= ENSG00000163347.5 TPM= 1.06 Transcript Type= protein_coding
chr3	190514051	190651519	190514051	190651519	+	ENST00000072516.7@IL1RAP	ENST00000072516.7	protein_coding	190514051,190564289,190604128,190608995,190620275,190623344,190627323,190629350,190644248,190645699,190648338	190514219,190564353,190604413,190609181,190620440,190623415,190627449,190629498,190644397,190645842,190651519	Gene ID= ENSG00000196083.9 TPM= 5.31 Transcript Type= protein_coding
chr3	190514102	190630285	190514102	190630285	+	ENST00000422940.5@IL1RAP	ENST00000422940.5	protein_coding	190514102,190564289,190604128,190608995,190620275,190623344,190627323,190629350	190514219,190564353,190604413,190609181,190620440,190623415,190627449,190630285	Gene ID= ENSG00000196083.9 TPM= 3.19 Transcript Type= protein_coding
chr3	190514098	190630285	190514098	190630285	+	ENST00000422485.5@IL1RAP	ENST00000422485.5	protein_coding	190514098,190556130,190564289,190604128,190608995,190620275,190623344,190627323,190629350	190514219,190556216,190564353,190604413,190609181,190620440,190623415,190627449,190630285	Gene ID= ENSG00000196083.9 TPM= 1.06 Transcript Type= protein_coding
chr3	190514537	190517967	190514537	190517967	+	transcript7115.chr3.nnic@NA	transcript7115.chr3.nnic	NA	190514537	190517967	Gene ID= novel_gene_chr3_7116 TPM= 2.12 Transcript Type= NA
chr3	190862826	190863570	190862826	190863570	+	transcript7117.chr3.nnic@NA	transcript7117.chr3.nnic	NA	190862826	190863570	Gene ID= novel_gene_chr3_7118 TPM= 2.12 Transcript Type= NA
chr3	191329085	191392175	191329085	191392175	+	ENST00000392456.3@CCDC50	ENST00000392456.3	protein_coding	191329085,191357088,191357998,191361069,191369919,191375062,191380159,191380687,191380828,191382746,191389496,191391741	191329723,191357150,191358124,191361159,191370036,191375589,191380274,191380731,191380932,191382825,191389602,191392175	Gene ID= ENSG00000152492.13 TPM= 1.59 Transcript Type= protein_coding
chr3	191329077	191398670	191329077	191398670	+	ENST00000392455.7@CCDC50	ENST00000392455.7	protein_coding	191329077,191357088,191357998,191361069,191369919,191380159,191380687,191380828,191382746,191389496,191391741	191329723,191357150,191358124,191361159,191370036,191380274,191380731,191380932,191382825,191389602,191398670	Gene ID= ENSG00000152492.13 TPM= 71.7 Transcript Type= protein_coding
chr3	192238344	192243546	192238344	192243546	+	transcript7136.chr3.nnic@NA	transcript7136.chr3.nnic	NA	192238344	192243546	Gene ID= novel_gene_chr3_7137 TPM= 2.12 Transcript Type= NA
chr3	192657490	192660520	192657490	192660520	+	transcript7139.chr3.nnic@NA	transcript7139.chr3.nnic	NA	192657490	192660520	Gene ID= novel_gene_chr3_7140 TPM= 3.19 Transcript Type= NA
chr3	192796815	192918161	192796815	192918161	-	ENST00000392452.2@MB21D2	ENST00000392452.2	protein_coding	192917630,192796815	192918161,192799650	Gene ID= ENSG00000180611.6 TPM= 8.5 Transcript Type= protein_coding
chr3	193240655	193270855	193240655	193270855	+	transcript7143.chr3.nnic@HRASLS	transcript7143.chr3.nnic	protein_coding	193240655,193251367,193255651,193262970,193270604	193240821,193251500,193255789,193263235,193270855	Gene ID= ENSG00000127252.5 TPM= 2.12 Transcript Type= NA
chr3	193241125	193270855	193241125	193270855	+	ENST00000264735.2@HRASLS	ENST00000264735.2	protein_coding	193241125,193255651,193262970,193270604	193241533,193255789,193263235,193270855	Gene ID= ENSG00000127252.5 TPM= 13.81 Transcript Type= protein_coding
chr3	193241202	193315418	193241202	193315418	+	transcript7150.chr3.nnic@HRASLS	transcript7150.chr3.nnic	protein_coding	193241202,193314044	193241533,193315418	Gene ID= ENSG00000127252.5 TPM= 2.12 Transcript Type= NA
chr3	193593144	193697810	193593144	193697810	+	ENST00000361510.6@OPA1	ENST00000361510.6	protein_coding	193593144,193614723,193615674,193617178,193617784,193618869,193626092,193631612,193635418,193637195,193637952,193642765,193642975,193643373,193643528,193643975,193645553,193645728,193647065,193648070,193648795,193654862,193657080,193658887,193659482,193662822,193664880,193666296,193667170,193692063,193694606	193593409,193615041,193615770,193617285,193617837,193618936,193626202,193631665,193635522,193637281,193638065,193642845,193643049,193643444,193643627,193644105,193645625,193645800,193647180,193648134,193648871,193655027,193657232,193658995,193659561,193662962,193664996,193666389,193667280,193692132,193697810	Gene ID= ENSG00000198836.8 TPM= 3.19 Transcript Type= protein_coding
chr3	193593144	193697810	193593144	193697810	+	ENST00000361828.6@OPA1	ENST00000361828.6	protein_coding	193593144,193614723,193615674,193617178,193617784,193618869,193631612,193635418,193637195,193637952,193642765,193642975,193643373,193643528,193643975,193645553,193645728,193647065,193648070,193648795,193654862,193657080,193658887,193659482,193662822,193664880,193666296,193667170,193692063,193694606	193593409,193615041,193615770,193617285,193617837,193618936,193631665,193635522,193637281,193638065,193642845,193643049,193643444,193643627,193644105,193645625,193645800,193647180,193648134,193648871,193655027,193657232,193658995,193659561,193662962,193664996,193666389,193667280,193692132,193697810	Gene ID= ENSG00000198836.8 TPM= 5.31 Transcript Type= protein_coding
chr3	193593144	193697811	193593144	193697811	+	ENST00000361908.7@OPA1	ENST00000361908.7	protein_coding	193593144,193614723,193615674,193617178,193618869,193626092,193631612,193635418,193637195,193637952,193642765,193642975,193643373,193643528,193643975,193645553,193645728,193647065,193648070,193648795,193654862,193657080,193658887,193659482,193662822,193664880,193666296,193667170,193692063,193694606	193593409,193615041,193615770,193617285,193618936,193626202,193631665,193635522,193637281,193638065,193642845,193643049,193643444,193643627,193644105,193645625,193645800,193647180,193648134,193648871,193655027,193657232,193658995,193659561,193662962,193664996,193666389,193667280,193692132,193697811	Gene ID= ENSG00000198836.8 TPM= 6.9 Transcript Type= protein_coding
chr3	193593144	193697823	193593144	193697823	+	ENST00000392438.7@OPA1	ENST00000392438.7	protein_coding	193593144,193614723,193615674,193617178,193618869,193631612,193635418,193637195,193637952,193642765,193642975,193643373,193643528,193643975,193645553,193645728,193647065,193648070,193648795,193654862,193657080,193658887,193659482,193662822,193664880,193666296,193667170,193692063,193694606	193593409,193615041,193615770,193617285,193618936,193631665,193635522,193637281,193638065,193642845,193643049,193643444,193643627,193644105,193645625,193645800,193647180,193648134,193648871,193655027,193657232,193658995,193659561,193662962,193664996,193666389,193667280,193692132,193697823	Gene ID= ENSG00000198836.8 TPM= 5.84 Transcript Type= protein_coding
chr3	194009458	194070952	194009458	194070952	-	ENST00000449350.6@LINC02028	ENST00000449350.6	processed_transcript	194070822,194052360,194015551,194009458	194070952,194052442,194015635,194010577	Gene ID= ENSG00000230102.7 TPM= 1.06 Transcript Type= lincRNA
chr3	194136145	194138732	194136145	194138732	+	ENST00000232424.3@HES1	ENST00000232424.3	protein_coding	194136145,194136617,194136961,194137683	194136488,194136712,194137048,194138732	Gene ID= ENSG00000114315.3 TPM= 11.68 Transcript Type= protein_coding
chr3	194136144	194138604	194136144	194138604	+	transcript7188.chr3.nic@HES1	transcript7188.chr3.nic	protein_coding	194136144,194136617,194136961	194136488,194136712,194138604	Gene ID= ENSG00000114315.3 TPM= 2.12 Transcript Type= NA
chr3	194402677	194486845	194402677	194486845	-	transcript7190.chr3.nnic@ATP13A3	transcript7190.chr3.nnic	protein_coding	194486566,194485794,194482982,194462140,194460658,194459789,194459471,194457094,194455893,194454258,194453706,194450145,194448457,194447852,194446927,194444725,194441311,194438856,194437556,194437311,194437095,194433772,194431717,194431104,194430943,194430273,194430072,194429678,194428845,194427075,194425342,194419879,194413759,194412199,194402677	194486845,194485835,194483103,194462236,194460831,194459971,194459541,194457174,194455962,194454392,194453778,194450276,194448636,194448009,194447115,194444786,194441461,194438972,194437573,194437464,194437215,194433896,194431892,194431226,194431022,194430315,194430181,194429774,194428917,194427252,194425529,194419967,194413839,194412288,194406116	Gene ID= ENSG00000133657.14 TPM= 12.21 Transcript Type= NA
chr3	194402677	194487022	194402677	194487022	-	transcript7191.chr3.nic@ATP13A3	transcript7191.chr3.nic	protein_coding	194486566,194485794,194462140,194460658,194459789,194459471,194457094,194455893,194454258,194453706,194450145,194448457,194447852,194446927,194444725,194441311,194438856,194437556,194437311,194437095,194433772,194431717,194431104,194430943,194430273,194430072,194429678,194428845,194427075,194425342,194419879,194413759,194412199,194402677	194487022,194485835,194462236,194460831,194459971,194459541,194457174,194455962,194454392,194453778,194450276,194448636,194448009,194447115,194444786,194441461,194438972,194437573,194437464,194437215,194433896,194431892,194431226,194431022,194430315,194430181,194429774,194428917,194427252,194425529,194419967,194413839,194412288,194406116	Gene ID= ENSG00000133657.14 TPM= 30.27 Transcript Type= NA
chr3	194402677	194486807	194402677	194486807	-	transcript7197.chr3.nnic@ATP13A3	transcript7197.chr3.nnic	protein_coding	194486566,194485794,194462140,194460658,194459789,194459471,194455893,194454258,194453706,194450145,194448457,194447852,194446927,194444725,194441311,194438856,194437556,194437311,194437095,194433772,194431717,194431104,194430943,194430273,194430072,194429678,194428845,194427075,194425342,194419879,194413759,194412199,194402677	194486807,194485835,194462236,194460831,194459971,194459541,194455962,194454392,194453778,194450276,194448636,194448009,194447115,194444786,194441461,194438972,194437573,194437464,194437215,194433896,194431892,194431226,194431022,194430315,194430181,194429774,194428917,194427252,194425529,194419967,194413839,194412288,194406116	Gene ID= ENSG00000133657.14 TPM= 15.4 Transcript Type= NA
chr3	194419073	194486826	194419073	194486826	-	transcript7201.chr3.nnic@ATP13A3	transcript7201.chr3.nnic	protein_coding	194486566,194485794,194462140,194460658,194459789,194459471,194455893,194454258,194453706,194450145,194448457,194447852,194446927,194444725,194441311,194438856,194437556,194437311,194437095,194433772,194431717,194431104,194430943,194430273,194430072,194429678,194428845,194427075,194425342,194419073	194486826,194485835,194462236,194460831,194459971,194459541,194455962,194454392,194453778,194450276,194448636,194448009,194447115,194444786,194441461,194438972,194437573,194437464,194437215,194433896,194431892,194431226,194431022,194430315,194430181,194429774,194428917,194427252,194425529,194419812	Gene ID= ENSG00000133657.14 TPM= 3.72 Transcript Type= NA
chr3	194433233	194487022	194433233	194487022	-	transcript7203.chr3.nic@ATP13A3	transcript7203.chr3.nic	protein_coding	194486566,194485794,194462140,194460658,194459789,194459471,194457094,194455893,194454258,194453706,194450145,194448457,194447852,194446927,194444725,194441311,194438856,194437556,194437311,194437095,194433233	194487022,194485835,194462236,194460831,194459971,194459541,194457174,194455962,194454392,194453778,194450276,194448636,194448009,194447115,194444786,194441461,194438972,194437573,194437464,194437215,194433896	Gene ID= ENSG00000133657.14 TPM= 4.25 Transcript Type= NA
chr3	194481250	194483438	194481250	194483438	+	transcript7208.chr3.nnic@NA	transcript7208.chr3.nnic	NA	194481250	194483438	Gene ID= novel_gene_chr3_7209 TPM= 5.31 Transcript Type= NA
chr3	194583992	194584909	194583992	194584909	+	transcript7225.chr3.nnic@NA	transcript7225.chr3.nnic	NA	194583992	194584909	Gene ID= novel_gene_chr3_7226 TPM= 2.12 Transcript Type= NA
chr3	194587678	194633431	194587678	194633431	-	transcript7213.chr3.nnic@TMEM44	transcript7213.chr3.nnic	protein_coding	194633079,194628383,194625897,194623529,194623224,194617099,194615569,194610916,194604287,194593041,194589768,194587678	194633431,194628509,194625990,194623695,194623310,194617269,194615697,194611020,194604445,194593073,194589962,194588639	Gene ID= ENSG00000145014.17 TPM= 2.12 Transcript Type= NA
chr3	194587678	194633532	194587678	194633532	-	transcript7214.chr3.nic@TMEM44	transcript7214.chr3.nic	protein_coding	194633079,194628383,194625897,194623529,194623224,194617099,194615569,194610916,194604287,194593041,194587678	194633532,194628509,194625990,194623695,194623310,194617269,194615697,194611020,194604445,194593073,194588639	Gene ID= ENSG00000145014.17 TPM= 2.12 Transcript Type= NA
chr3	194587681	194633348	194587681	194633348	-	transcript7217.chr3.nic@TMEM44	transcript7217.chr3.nic	protein_coding	194633079,194628383,194623529,194623224,194617099,194615569,194610916,194604287,194587681	194633348,194628509,194623695,194623310,194617269,194615697,194611020,194604445,194588639	Gene ID= ENSG00000145014.17 TPM= 3.19 Transcript Type= NA
chr3	194644601	194672513	194644601	194672513	-	transcript7231.chr3.nic@LSG1	transcript7231.chr3.nic	protein_coding	194672064,194670009,194666452,194666203,194665557,194660073,194658957,194652729,194651115,194650881,194648681,194646164,194644601	194672513,194670135,194666572,194666289,194665643,194660133,194659133,194653142,194651216,194651024,194648804,194646243,194644746	Gene ID= ENSG00000041802.10 TPM= 21.24 Transcript Type= NA
chr3	194686544	194689037	194686544	194689037	+	ENST00000329759.5@FAM43A	ENST00000329759.5	protein_coding	194686544	194689037	Gene ID= ENSG00000185112.5 TPM= 13.81 Transcript Type= protein_coding
chr3	194832319	194834361	194832319	194834361	-	transcript7240.chr3.nnic@NA	transcript7240.chr3.nnic	NA	194832319	194834361	Gene ID= novel_gene_chr3_7241 TPM= 2.12 Transcript Type= NA
chr3	195068279	195271167	195068279	195271167	-	ENST00000310380.10@XXYLT1	ENST00000310380.10	protein_coding	195270555,195226709,195156449,195068279	195271167,195226856,195156581,195070111	Gene ID= ENSG00000173950.15 TPM= 3.19 Transcript Type= protein_coding
chr3	195342606	195443091	195342606	195443091	-	transcript7251.chr3.nic@ACAP2	transcript7251.chr3.nic	protein_coding	195442795,195392090,195381903,195381009,195345259,195342606	195443091,195392147,195382022,195381062,195345317,195342654	Gene ID= ENSG00000114331.13 TPM= 4.25 Transcript Type= NA
chr3	195335899	195443043	195335899	195443043	-	ENST00000480906.5@ACAP2	ENST00000480906.5	protein_coding	195442795,195392090,195381903,195381009,195345259,195342471,195335899	195443043,195392147,195382022,195381062,195345317,195342654,195336976	Gene ID= ENSG00000114331.13 TPM= 1.06 Transcript Type= retained_intron
chr3	195514425	195543386	195514425	195543386	-	ENST00000618156.4@PPP1R2	ENST00000618156.4	protein_coding	195542904,195529794,195524819,195523692,195519018,195514425	195543386,195529901,195524896,195523786,195519185,195516942	Gene ID= ENSG00000184203.7 TPM= 82.85 Transcript Type= protein_coding
chr3	195528717	195543386	195528717	195543386	-	ENST00000462906.1@PPP1R2	ENST00000462906.1	protein_coding	195542904,195528717	195543386,195529901	Gene ID= ENSG00000184203.7 TPM= 1.06 Transcript Type= retained_intron
chr3	195568702	195584205	195568702	195584205	-	ENST00000343267.7@APOD	ENST00000343267.7	protein_coding	195583878,195579339,195573850,195571277,195568702	195584205,195579495,195573971,195571365,195569135	Gene ID= ENSG00000189058.8 TPM= 498.15 Transcript Type= protein_coding
chr3	195619426	195621929	195619426	195621929	+	transcript7263.chr3.nnic@NA	transcript7263.chr3.nnic	NA	195619426	195621929	Gene ID= novel_gene_chr3_7264 TPM= 2.12 Transcript Type= NA
chr3	195658065	195688862	195658065	195688862	+	ENST00000429897.5@LINC00969	ENST00000429897.5	lincRNA	195658065,195661756,195662571,195664086,195666066,195668519,195671132,195672484,195673818,195677727,195681190,195681536,195683752,195688533	195658165,195661841,195662733,195664250,195666214,195668641,195671300,195672679,195673987,195677848,195681301,195681666,195683865,195688862	Gene ID= ENSG00000242086.8 TPM= 2.12 Transcript Type= lincRNA
chr3	195686271	195687226	195686271	195687226	-	transcript7347.chr3.nnic@NA	transcript7347.chr3.nnic	NA	195687184,195686271	195687226,195686902	Gene ID= novel_gene_chr3_7348 TPM= 16.64 Transcript Type= NA
chr3	195686271	195687350	195686271	195687350	-	transcript7320.chr3.nnic@NA	transcript7320.chr3.nnic	NA	195687324,195686968,195686271	195687350,195687296,195686871	Gene ID= novel_gene_chr3_7321 TPM= 15.58 Transcript Type= NA
chr3	195686271	195687381	195686271	195687381	-	transcript7339.chr3.nnic@NA	transcript7339.chr3.nnic	NA	195687184,195686271	195687381,195686807	Gene ID= novel_gene_chr3_7340 TPM= 12.4 Transcript Type= NA
chr3	195686271	195687504	195686271	195687504	-	transcript7349.chr3.nnic@NA	transcript7349.chr3.nnic	NA	195687184,195686271	195687504,195687029	Gene ID= novel_gene_chr3_7350 TPM= 4.25 Transcript Type= NA
chr3	195686271	195687833	195686271	195687833	-	transcript7344.chr3.nnic@NA	transcript7344.chr3.nnic	NA	195686968,195686271	195687833,195686871	Gene ID= novel_gene_chr3_7345 TPM= 8.5 Transcript Type= NA
chr3	195686271	195689199	195686271	195689199	-	transcript7292.chr3.nnic@NA	transcript7292.chr3.nnic	NA	195687461,195687184,195686999,195686271	195689199,195687401,195687061,195686839	Gene ID= novel_gene_chr3_7293 TPM= 13.28 Transcript Type= NA
chr3	195686271	195689672	195686271	195689672	-	transcript7323.chr3.nnic@NA	transcript7323.chr3.nnic	NA	195687466,195687247,195686271	195689672,195687343,195687214	Gene ID= novel_gene_chr3_7324 TPM= 9.03 Transcript Type= NA
chr3	195686271	195690863	195686271	195690863	-	transcript7314.chr3.nnic@NA	transcript7314.chr3.nnic	NA	195687582,195687018,195686271	195690863,195687278,195686793	Gene ID= novel_gene_chr3_7315 TPM= 6.37 Transcript Type= NA
chr3	195695794	195697888	195695794	195697888	-	transcript7359.chr3.nnic@NA	transcript7359.chr3.nnic	NA	195695794	195697888	Gene ID= novel_gene_chr3_7360 TPM= 3.19 Transcript Type= NA
chr3	195712524	195713604	195712524	195713604	-	transcript7331.chr3.nnic@NA	transcript7331.chr3.nnic	NA	195713567,195713418,195712524	195713604,195713537,195712918	Gene ID= novel_gene_chr3_7332 TPM= 3.19 Transcript Type= NA
chr3	195863364	195895561	195863364	195895561	-	ENST00000381916.6@TNK2	ENST00000381916.6	protein_coding	195895246,195888426,195886977,195884812,195883157,195882051,195879049,195878446,195878253,195872276,195870114,195869497,195867361,195866889,195863364	195895561,195888606,195887047,195885033,195883309,195882328,195879175,195878592,195878347,195872470,195870205,195869541,195868709,195867016,195864187	Gene ID= ENSG00000061938.17 TPM= 5.31 Transcript Type= protein_coding
chr3	195959748	195990332	195959748	195990332	-	transcript7366.chr3.nic@SDHAP1	transcript7366.chr3.nic	transcribed_unprocessed_pseudogene	195990190,195986519,195985627,195984112,195982162,195979744,195977083,195975705,195974397,195971323,195967879,195967514,195965429,195963300,195959748	195990332,195986604,195985789,195984276,195982310,195979866,195977251,195975900,195974566,195971444,195967990,195967644,195965542,195963421,195960086	Gene ID= ENSG00000185485.14 TPM= 7.44 Transcript Type= NA
chr3	195963104	195990322	195963104	195990322	-	transcript7375.chr3.nnic@SDHAP1	transcript7375.chr3.nnic	transcribed_unprocessed_pseudogene	195990190,195984112,195982162,195979744,195977083,195975705,195974397,195971323,195967879,195967514,195965429,195963104	195990322,195984276,195982310,195979866,195977251,195975900,195974566,195971444,195967990,195967644,195965542,195963421	Gene ID= ENSG00000185485.14 TPM= 4.78 Transcript Type= NA
chr3	195963104	195971203	195963104	195971203	-	transcript7381.chr3.nic@SDHAP1	transcript7381.chr3.nic	transcribed_unprocessed_pseudogene	195967879,195967514,195965429,195963104	195971203,195967644,195965542,195963421	Gene ID= ENSG00000185485.14 TPM= 3.72 Transcript Type= NA
chr3	195981584	195990332	195981584	195990332	-	transcript7383.chr3.nic@SDHAP1	transcript7383.chr3.nic	transcribed_unprocessed_pseudogene	195990190,195986519,195984112,195981584	195990332,195986604,195985789,195982310	Gene ID= ENSG00000185485.14 TPM= 3.19 Transcript Type= NA
chr3	195981584	195990322	195981584	195990322	-	transcript7390.chr3.nnic@SDHAP1	transcript7390.chr3.nnic	transcribed_unprocessed_pseudogene	195990190,195984112,195981584	195990322,195984276,195982310	Gene ID= ENSG00000185485.14 TPM= 2.12 Transcript Type= NA
chr3	195961123	195962971	195961123	195962971	+	transcript7385.chr3.nnic@NA	transcript7385.chr3.nnic	NA	195961123,195962056,195962236	195961960,195962206,195962971	Gene ID= novel_gene_chr3_7386 TPM= 2.12 Transcript Type= NA
chr3	196049284	196081561	196049284	196081561	-	transcript7396.chr3.nnic@TFRC	transcript7396.chr3.nnic	protein_coding	196081089,196077064,196075159,196073930,196072003,196071396,196069455,196068032,196067518,196065443,196064309,196062854,196062582,196060180,196058574,196058284,196055080,196053418,196049284	196081561,196077122,196075360,196074125,196072152,196071498,196069568,196068130,196067657,196065600,196064428,196062939,196062645,196060247,196058632,196058365,196055301,196053558,196052184	Gene ID= ENSG00000072274.12 TPM= 20.18 Transcript Type= NA
chr3	196049284	196082189	196049284	196082189	-	ENST00000360110.8@TFRC	ENST00000360110.8	protein_coding	196082043,196077064,196075159,196073930,196072003,196071396,196069455,196068032,196067518,196065443,196064309,196062854,196062582,196060180,196058574,196058284,196055080,196053418,196049284	196082189,196077122,196075360,196074125,196072152,196071498,196069568,196068130,196067657,196065600,196064428,196062939,196062645,196060247,196058632,196058365,196055301,196053558,196052184	Gene ID= ENSG00000072274.12 TPM= 65.85 Transcript Type= protein_coding
chr3	196234371	196287748	196234371	196287748	-	transcript7400.chr3.nnic@PCYT1A	transcript7400.chr3.nnic	protein_coding	196287615,196270415,196257788,196248207,196247367,196242562,196241948,196239547,196237792,196234371	196287748,196270541,196257887,196248323,196247518,196242640,196242090,196239735,196238894,196234864	Gene ID= ENSG00000161217.11 TPM= 11.68 Transcript Type= NA
chr3	196234368	196287713	196234368	196287713	-	ENST00000292823.6@PCYT1A	ENST00000292823.6	protein_coding	196287615,196283475,196270415,196257788,196248207,196247367,196242562,196241948,196239547,196234368	196287713,196283538,196270541,196257887,196248323,196247518,196242640,196242090,196239735,196238894	Gene ID= ENSG00000161217.11 TPM= 181.63 Transcript Type= protein_coding
chr3	196231814	196235915	196231814	196235915	-	transcript7414.chr3.nnic@NA	transcript7414.chr3.nnic	NA	196231814	196235915	Gene ID= novel_gene_chr3_7415 TPM= 2.12 Transcript Type= NA
chr3	196286444	196288095	196286444	196288095	-	transcript7416.chr3.nnic@NA	transcript7416.chr3.nnic	NA	196286444	196288095	Gene ID= novel_gene_chr3_7417 TPM= 2.12 Transcript Type= NA
chr3	196318330	196323673	196318330	196323673	+	ENST00000420226.1@TM4SF19-AS1	ENST00000420226.1	antisense_RNA	196318330,196323460	196318437,196323673	Gene ID= ENSG00000235897.1 TPM= 1.06 Transcript Type= antisense_RNA
chr3	196347662	196432474	196347662	196432474	-	ENST00000296328.8@UBXN7	ENST00000296328.8	protein_coding	196432327,196407246,196402952,196393554,196391813,196371896,196369421,196368028,196362294,196361844,196347662	196432474,196407393,196403019,196393619,196391925,196372042,196369511,196368155,196362687,196361923,196356846	Gene ID= ENSG00000163960.11 TPM= 9.56 Transcript Type= protein_coding
chr3	196469229	196470441	196469229	196470441	-	transcript7436.chr3.nnic@NA	transcript7436.chr3.nnic	NA	196469229	196470441	Gene ID= novel_gene_chr3_7437 TPM= 2.12 Transcript Type= NA
chr3	196506877	196515366	196506877	196515366	-	ENST00000397537.2@SMCO1	ENST00000397537.2	protein_coding	196515160,196509520,196506877	196515366,196509669,196508331	Gene ID= ENSG00000214097.4 TPM= 109.4 Transcript Type= protein_coding
chr3	196506879	196515346	196506879	196515346	-	ENST00000452776.1@SMCO1	ENST00000452776.1	protein_coding	196515104,196509520,196506879	196515346,196509669,196508331	Gene ID= ENSG00000214097.4 TPM= 11.68 Transcript Type= nonsense_mediated_decay
chr3	196554177	196568560	196554177	196568560	-	transcript7448.chr3.nnic@WDR53	transcript7448.chr3.nnic	protein_coding	196568519,196560996,196554177	196568560,196561491,196554807	Gene ID= ENSG00000185798.7 TPM= 2.12 Transcript Type= NA
chr3	196554188	196568581	196554188	196568581	-	ENST00000429115.1@WDR53	ENST00000429115.1	protein_coding	196568519,196554188	196568581,196554807	Gene ID= ENSG00000185798.7 TPM= 2.12 Transcript Type= protein_coding
chr3	196631498	196632587	196631498	196632587	-	ENST00000441644.1@LINC01063	ENST00000441644.1	antisense_RNA	196632388,196631498	196632587,196631645	Gene ID= ENSG00000232065.1 TPM= 1.06 Transcript Type= antisense_RNA
chr3	196639686	196662004	196639686	196662004	+	ENST00000328557.4@NRROS	ENST00000328557.4	protein_coding	196639686,196654527,196659752	196639875,196654647,196662004	Gene ID= ENSG00000174004.5 TPM= 1.06 Transcript Type= protein_coding
chr3	196712316	196734901	196712316	196734901	+	transcript7454.chr3.nic@PIGX	transcript7454.chr3.nic	protein_coding	196712316,196716858,196722415,196726655,196727923,196728702,196730992,196733759	196712644,196716921,196722556,196726771,196728136,196728755,196731092,196734901	Gene ID= ENSG00000163964.14 TPM= 3.19 Transcript Type= NA
chr3	196706277	196712293	196706277	196712293	-	ENST00000409690.3@CEP19	ENST00000409690.3	protein_coding	196711929,196708528,196706277	196712293,196708727,196707912	Gene ID= ENSG00000174007.7 TPM= 1.06 Transcript Type= protein_coding
chr3	196867856	196934714	196867856	196934714	+	ENST00000323460.9@SENP5	ENST00000323460.9	protein_coding	196867856,196885151,196899666,196899924,196900365,196903533,196923414,196927796,196929633,196930813	196868073,196886694,196899771,196900062,196900412,196903610,196923551,196927879,196929683,196934714	Gene ID= ENSG00000119231.10 TPM= 60.54 Transcript Type= protein_coding
chr3	196867882	196931285	196867882	196931285	+	transcript7495.chr3.nic@SENP5	transcript7495.chr3.nic	protein_coding	196867882,196885151,196899666,196899924,196900365,196903533,196923414,196929633,196930813	196868073,196886694,196899771,196900062,196900412,196903610,196923551,196929683,196931285	Gene ID= ENSG00000119231.10 TPM= 4.25 Transcript Type= NA
chr3	196935409	196942594	196935409	196942594	-	ENST00000428425.1@NCBP2	ENST00000428425.1	protein_coding	196942370,196939251,196937510,196935409	196942594,196939432,196937648,196937082	Gene ID= ENSG00000114503.10 TPM= 21.77 Transcript Type= nonsense_mediated_decay
chr3	196935407	196942597	196935407	196942597	-	ENST00000321256.9@NCBP2	ENST00000321256.9	protein_coding	196942426,196939251,196937510,196935407	196942597,196939432,196937648,196937082	Gene ID= ENSG00000114503.10 TPM= 50.45 Transcript Type= protein_coding
chr3	196942623	196943540	196942623	196943540	+	ENST00000602845.1@NCBP2-AS2	ENST00000602845.1	protein_coding	196942623	196943540	Gene ID= ENSG00000270170.1 TPM= 84.97 Transcript Type= protein_coding
chr3	196946356	196968862	196946356	196968862	-	transcript7507.chr3.nnic@PIGZ	transcript7507.chr3.nnic	protein_coding	196968687,196951821,196950334,196946356	196968862,196952031,196950492,196948685	Gene ID= ENSG00000119227.7 TPM= 2.12 Transcript Type= NA
chr3	196951538	196969060	196951538	196969060	-	ENST00000238138.2@PIGZ	ENST00000238138.2	protein_coding	196968687,196951538	196969060,196952031	Gene ID= ENSG00000119227.7 TPM= 1.06 Transcript Type= retained_intron
chr3	196946343	196968833	196946343	196968833	-	ENST00000412723.5@PIGZ	ENST00000412723.5	protein_coding	196968687,196951821,196946343	196968833,196952031,196948685	Gene ID= ENSG00000119227.7 TPM= 11.68 Transcript Type= protein_coding
chr3	197018953	197029830	197018953	197029830	-	transcript7514.chr3.nnic@MELTF	transcript7514.chr3.nnic	protein_coding	197029654,197027756,197026660,197024303,197022957,197021404,197018953	197029830,197027910,197026759,197024485,197023031,197021471,197019801	Gene ID= ENSG00000163975.11 TPM= 3.19 Transcript Type= NA
chr3	197001740	197029816	197001740	197029816	-	ENST00000296350.9@MELTF	ENST00000296350.9	protein_coding	197029654,197027756,197026660,197024303,197022957,197021404,197017103,197016189,197015365,197010698,197009618,197008809,197008657,197006549,197003901,197001740	197029816,197027910,197026759,197024485,197023113,197021471,197017290,197016369,197015516,197010794,197009812,197008965,197008724,197006736,197004099,197003451	Gene ID= ENSG00000163975.11 TPM= 19.12 Transcript Type= protein_coding
chr3	197018953	197029791	197018953	197029791	-	ENST00000296351.8@MELTF	ENST00000296351.8	protein_coding	197029654,197027756,197026660,197024303,197022957,197021404,197018953	197029791,197027910,197026759,197024485,197023113,197021471,197019801	Gene ID= ENSG00000163975.11 TPM= 3.19 Transcript Type= protein_coding
chr3	197002952	197004740	197002952	197004740	+	transcript7519.chr3.nic@MELTF-AS1	transcript7519.chr3.nic	antisense_RNA	197002952,197003602,197004494	197003206,197003970,197004740	Gene ID= ENSG00000228109.1 TPM= 2.12 Transcript Type= NA
chr3	197003795	197004742	197003795	197004742	+	transcript7520.chr3.nnic@NA	transcript7520.chr3.nnic	NA	197003795	197004742	Gene ID= novel_gene_chr3_7521 TPM= 5.31 Transcript Type= NA
chr3	197042927	197298149	197042927	197298149	-	transcript7532.chr3.nic@DLG1	transcript7532.chr3.nic	protein_coding	197297673,197297186,197296346,197282679,197194425,197161640,197149743,197142718,197140140,197138222,197136542,197130527,197119410,197115927,197104903,197090912,197085580,197081051,197076586,197069219,197066704,197065708,197065276,197059889,197051577,197042927	197298149,197297235,197296477,197282845,197194589,197161738,197149796,197142768,197140264,197138391,197136678,197130671,197119530,197116083,197105005,197091026,197085756,197081117,197076685,197069260,197066754,197065809,197065448,197059998,197051668,197044729	Gene ID= ENSG00000075711.20 TPM= 11.99 Transcript Type= NA
chr3	197044073	197298091	197044073	197298091	-	transcript7542.chr3.nic@DLG1	transcript7542.chr3.nic	protein_coding	197297544,197297186,197296346,197282679,197194425,197161640,197149743,197142718,197140140,197138222,197136542,197130527,197119410,197115927,197104903,197090912,197085580,197081051,197076586,197069219,197066704,197065708,197065276,197059889,197051577,197044073	197298091,197297235,197296477,197282845,197194589,197161738,197149796,197142768,197140264,197138391,197136678,197130671,197119530,197116083,197105005,197091026,197085756,197081117,197076685,197069260,197066754,197065809,197065448,197059998,197051668,197044729	Gene ID= ENSG00000075711.20 TPM= 2.96 Transcript Type= NA
chr3	197042561	197298150	197042561	197298150	-	transcript7543.chr3.nic@DLG1	transcript7543.chr3.nic	protein_coding	197297544,197297186,197296346,197282679,197194425,197149743,197142718,197140140,197138222,197136542,197130527,197119410,197115927,197104903,197090912,197085580,197081051,197076586,197069219,197066704,197065708,197065276,197059889,197051577,197042561	197298150,197297235,197296477,197282845,197194589,197149796,197142768,197140264,197138391,197136678,197130671,197119530,197116083,197105005,197091026,197085756,197081117,197076685,197069260,197066754,197065809,197065448,197059998,197051668,197044729	Gene ID= ENSG00000075711.20 TPM= 3.49 Transcript Type= NA
chr3	197042927	197298149	197042927	197298149	-	transcript7545.chr3.nic@DLG1	transcript7545.chr3.nic	protein_coding	197297673,197297186,197296346,197282679,197194425,197149743,197142718,197140140,197138222,197136542,197130527,197119410,197115927,197104903,197090912,197085580,197081051,197076586,197069219,197066704,197065708,197065276,197059889,197051577,197042927	197298149,197297235,197296477,197282845,197194589,197149796,197142768,197140264,197138391,197136678,197130671,197119530,197116083,197105005,197091026,197085756,197081117,197076685,197069260,197066754,197065809,197065448,197059998,197051668,197044729	Gene ID= ENSG00000075711.20 TPM= 5.62 Transcript Type= NA
chr3	197042561	197297986	197042561	197297986	-	transcript7551.chr3.nic@DLG1	transcript7551.chr3.nic	protein_coding	197297673,197297186,197296346,197282679,197194425,197142718,197140140,197138222,197136542,197130527,197119410,197115927,197104903,197090912,197085580,197081051,197076586,197069219,197066704,197065708,197065276,197059889,197051577,197042561	197297986,197297235,197296477,197282845,197194589,197142768,197140264,197138391,197136678,197130671,197119530,197116083,197105005,197091026,197085756,197081117,197076685,197069260,197066754,197065809,197065448,197059998,197051668,197044729	Gene ID= ENSG00000075711.20 TPM= 2.96 Transcript Type= NA
chr3	197125398	197126477	197125398	197126477	+	transcript7567.chr3.nnic@NA	transcript7567.chr3.nnic	NA	197125398	197126477	Gene ID= novel_gene_chr3_7568 TPM= 3.19 Transcript Type= NA
chr3	197236763	197239855	197236763	197239855	+	transcript7569.chr3.nnic@NA	transcript7569.chr3.nnic	NA	197236763	197239855	Gene ID= novel_gene_chr3_7570 TPM= 2.12 Transcript Type= NA
chr3	197505262	197506986	197505262	197506986	-	ENST00000608206.1@LINC02012	ENST00000608206.1	lincRNA	197505262	197506986	Gene ID= ENSG00000272989.1 TPM= 1.06 Transcript Type= lincRNA
chr3	197509783	197555987	197509783	197555987	-	ENST00000392379.5@BDH1	ENST00000392379.5	protein_coding	197555781,197554562,197546361,197533489,197532412,197522640,197514264,197509783	197555987,197554713,197546486,197533561,197532522,197522781,197514416,197512364	Gene ID= ENSG00000161267.11 TPM= 5.31 Transcript Type= protein_coding
chr3	197509783	197556048	197509783	197556048	-	ENST00000392378.6@BDH1	ENST00000392378.6	protein_coding	197555781,197546361,197533489,197532412,197522640,197514264,197509783	197556048,197546486,197533561,197532522,197522781,197514416,197512364	Gene ID= ENSG00000161267.11 TPM= 64.79 Transcript Type= protein_coding
chr3	197554380	197555972	197554380	197555972	-	transcript7579.chr3.nic@BDH1	transcript7579.chr3.nic	protein_coding	197555781,197554380	197555972,197554713	Gene ID= ENSG00000161267.11 TPM= 2.12 Transcript Type= NA
chr3	197516359	197516771	197516359	197516771	-	transcript7580.chr3.nnic@NA	transcript7580.chr3.nnic	NA	197516359	197516771	Gene ID= novel_gene_chr3_7581 TPM= 2.12 Transcript Type= NA
chr3	197601725	197627905	197601725	197627905	-	transcript7583.chr3.nnic@AC132008.2	transcript7583.chr3.nnic	transcribed_unprocessed_pseudogene	197627780,197624112,197623220,197621704,197619740,197615564,197613225,197601725	197627905,197624197,197623382,197621868,197619888,197615685,197613318,197603717	Gene ID= ENSG00000214135.8 TPM= 10.62 Transcript Type= NA
chr3	197614027	197627906	197614027	197627906	-	ENST00000418868.5@AC132008.2	ENST00000418868.5	transcribed_unprocessed_pseudogene	197627780,197624112,197623220,197622187,197621704,197619740,197615564,197614027	197627906,197624197,197623382,197622330,197621868,197619888,197615685,197614622	Gene ID= ENSG00000214135.8 TPM= 2.12 Transcript Type= processed_transcript
chr3	197612601	197627905	197612601	197627905	-	transcript7590.chr3.nic@AC132008.2	transcript7590.chr3.nic	transcribed_unprocessed_pseudogene	197627780,197624112,197623220,197621704,197619740,197615564,197612601	197627905,197624197,197623382,197621868,197619888,197615685,197613318	Gene ID= ENSG00000214135.8 TPM= 2.12 Transcript Type= NA
chr3	197611538	197614032	197611538	197614032	-	transcript7599.chr3.nnic@NA	transcript7599.chr3.nnic	NA	197611538	197614032	Gene ID= novel_gene_chr3_7600 TPM= 5.31 Transcript Type= NA
chr3	197611642	197612797	197611642	197612797	+	transcript7597.chr3.nnic@NA	transcript7597.chr3.nnic	NA	197611642	197612797	Gene ID= novel_gene_chr3_7598 TPM= 2.12 Transcript Type= NA
chr3	197676217	197736914	197676217	197736914	-	transcript7608.chr3.nic@RUBCN	transcript7608.chr3.nic	protein_coding	197736655,197705092,197704542,197703548,197701708,197700613,197696954,197695866,197694375,197693715,197691074,197684157,197683307,197682470,197681835,197681129,197676217	197736914,197705175,197704701,197703654,197701864,197701146,197697049,197695981,197694585,197693816,197691148,197684217,197683439,197682615,197681899,197681367,197677541	Gene ID= ENSG00000145016.15 TPM= 3.19 Transcript Type= NA
chr3	197671983	197673337	197671983	197673337	-	transcript7613.chr3.nnic@NA	transcript7613.chr3.nnic	NA	197671983	197673337	Gene ID= novel_gene_chr3_7614 TPM= 6.37 Transcript Type= NA
chr3	197696807	197698877	197696807	197698877	+	transcript7611.chr3.nnic@NA	transcript7611.chr3.nnic	NA	197696807	197698877	Gene ID= novel_gene_chr3_7612 TPM= 21.24 Transcript Type= NA
chr3	197744062	197745847	197744062	197745847	-	transcript7618.chr3.nnic@NA	transcript7618.chr3.nnic	NA	197744062	197745847	Gene ID= novel_gene_chr3_7619 TPM= 4.25 Transcript Type= NA
chr3	197749750	197787596	197749750	197787596	+	ENST00000241502.8@FYTTD1	ENST00000241502.8	protein_coding	197749750,197756426,197768439,197770132,197773403,197774149,197776927,197778338,197781811	197750074,197756557,197768587,197770244,197773499,197774210,197777001,197778464,197787596	Gene ID= ENSG00000122068.12 TPM= 35.05 Transcript Type= protein_coding
chr3	197749842	197782993	197749842	197782993	+	transcript7630.chr3.nnic@FYTTD1	transcript7630.chr3.nnic	protein_coding	197749842,197756426,197768439,197770132,197773403,197774149,197776927,197778390,197781811	197750074,197756557,197768587,197770244,197773499,197774210,197777001,197778464,197782993	Gene ID= ENSG00000122068.12 TPM= 8.5 Transcript Type= NA
chr3	197791237	197882543	197791237	197882543	+	transcript7642.chr3.nic@LRCH3	transcript7642.chr3.nic	protein_coding	197791237,197814908,197817176,197820325,197826878,197829564,197830770,197832197,197835674,197839321,197847409,197847872,197852561,197854392,197858834,197865423,197866112,197870160,197871325,197875698,197880512	197791540,197815052,197817302,197820430,197827014,197829673,197830863,197832317,197835822,197839397,197847460,197848021,197852620,197854445,197858905,197865471,197866219,197870278,197871462,197875775,197882543	Gene ID= ENSG00000186001.12 TPM= 3.19 Transcript Type= NA
chr3	197791237	197833391	197791237	197833391	+	transcript7647.chr3.nic@LRCH3	transcript7647.chr3.nic	protein_coding	197791237,197814908,197817176,197820325,197826878,197829564,197830770,197832197	197791540,197815052,197817302,197820430,197827014,197829673,197830863,197833391	Gene ID= ENSG00000186001.12 TPM= 3.19 Transcript Type= NA
chr3	197861732	197862784	197861732	197862784	-	transcript7654.chr3.nnic@NA	transcript7654.chr3.nnic	NA	197861732	197862784	Gene ID= novel_gene_chr3_7655 TPM= 2.12 Transcript Type= NA
chr3	197889077	197949925	197889077	197949925	-	ENST00000455191.5@IQCG	ENST00000455191.5	protein_coding	197949839,197945620,197943778,197938548,197932174,197926024,197913881,197912675,197892628,197891446,197889077	197949925,197945686,197944051,197938780,197932302,197926105,197914042,197912749,197892759,197891547,197889714	Gene ID= ENSG00000114473.13 TPM= 1.59 Transcript Type= protein_coding
chr3	197889078	197913284	197889078	197913284	-	ENST00000478903.5@IQCG	ENST00000478903.5	protein_coding	197912675,197892628,197891446,197889078	197913284,197892759,197891547,197889714	Gene ID= ENSG00000114473.13 TPM= 1.06 Transcript Type= retained_intron
chr3	197889075	197960019	197889075	197960019	-	ENST00000265239.10@IQCG	ENST00000265239.10	protein_coding	197959845,197959529,197945620,197943778,197938548,197932174,197926024,197913881,197912675,197892628,197891446,197889075	197960019,197959719,197945686,197944051,197938780,197932302,197926105,197914042,197912749,197892759,197891547,197889714	Gene ID= ENSG00000114473.13 TPM= 2.66 Transcript Type= protein_coding
chr3	197949987	197956610	197949987	197956610	+	ENST00000464167.5@RPL35A	ENST00000464167.5	protein_coding	197949987,197950936,197951159,197954003,197955750	197950221,197950978,197951311,197954147,197956610	Gene ID= ENSG00000182899.14 TPM= 267.13 Transcript Type= protein_coding
chr3	197950194	197955851	197950194	197955851	+	ENST00000448864.5@RPL35A	ENST00000448864.5	protein_coding	197950194,197950936,197951159,197954003,197955750	197950299,197950978,197951311,197954147,197955851	Gene ID= ENSG00000182899.14 TPM= 37.18 Transcript Type= protein_coding
chr3	197950206	197955817	197950206	197955817	+	ENST00000429437.5@RPL35A	ENST00000429437.5	protein_coding	197950206,197950936,197951159,197954003,197955750	197950221,197950978,197951328,197954147,197955817	Gene ID= ENSG00000182899.14 TPM= 263.95 Transcript Type= nonsense_mediated_decay
chr3	197952897	197955809	197952897	197955809	+	transcript7674.chr3.nnic@NA	transcript7674.chr3.nnic	NA	197952897	197955809	Gene ID= novel_gene_chr3_7675 TPM= 3.19 Transcript Type= NA
chr3	197960200	198043720	197960200	198043720	+	ENST00000330198.8@LMLN	ENST00000330198.8	protein_coding	197960200,197974377,197975042,197976029,197976598,197980326,197983943,197985796,197990559,197996175,197999266,198019253,198021446,198024658,198035833,198038567	197960440,197974474,197975072,197976111,197976715,197980504,197984048,197985890,197990676,197996282,197999342,198019385,198021605,198024788,198036043,198043720	Gene ID= ENSG00000185621.11 TPM= 1.06 Transcript Type= protein_coding
chr4	53285	88211	53285	88211	+	ENST00000610261.5@ZNF595	ENST00000610261.5	protein_coding	53285,59430,60058,85731	53491,59556,60153,88211	Gene ID= ENSG00000272602.5 TPM= 4.25 Transcript Type= protein_coding
chr4	53331	55782	53331	55782	+	transcript4.chr4.nnic@NA	transcript4.chr4.nnic	NA	53331	55782	Gene ID= novel_gene_chr4_5 TPM= 2.12 Transcript Type= NA
chr4	124457	134711	124457	134711	+	transcript11.chr4.nnic@ZNF718	transcript11.chr4.nnic	protein_coding	124457,126848,127008,134170	124673,126921,127127,134711	Gene ID= ENSG00000250312.6 TPM= 3.19 Transcript Type= NA
chr4	124482	133825	124482	133825	+	transcript17.chr4.nnic@ZNF718	transcript17.chr4.nnic	protein_coding	124482,126848,133270	125296,127127,133825	Gene ID= ENSG00000250312.6 TPM= 3.19 Transcript Type= NA
chr4	361389	365401	361389	365401	-	transcript26.chr4.nnic@NA	transcript26.chr4.nnic	NA	361389	365401	Gene ID= novel_gene_chr4_27 TPM= 2.12 Transcript Type= NA
chr4	367521	369266	367521	369266	-	transcript28.chr4.nnic@NA	transcript28.chr4.nnic	NA	367521	369266	Gene ID= novel_gene_chr4_29 TPM= 2.12 Transcript Type= NA
chr4	425410	474153	425410	474153	-	transcript32.chr4.nnic@ZNF721	transcript32.chr4.nnic	protein_coding	473981,472575,437446,435770,425410	474153,472701,437511,435879,426973	Gene ID= ENSG00000182903.15 TPM= 2.12 Transcript Type= NA
chr4	444083	474167	444083	474167	-	ENST00000505900.1@ZNF721	ENST00000505900.1	protein_coding	473981,472575,444083	474167,472701,444432	Gene ID= ENSG00000182903.15 TPM= 1.06 Transcript Type= protein_coding
chr4	499221	539529	499221	539529	+	ENST00000310340.9@PIGG	ENST00000310340.9	protein_coding	499221,500396,505718,507405,508829,515973,521056,521660,523459,527039,530436,533818,539153	499489,500601,505927,507593,508970,516185,521249,521941,523913,527230,530745,533981,539529	Gene ID= ENSG00000174227.15 TPM= 1.06 Transcript Type= protein_coding
chr4	499230	539529	499230	539529	+	ENST00000453061.6@PIGG	ENST00000453061.6	protein_coding	499230,500396,505718,507405,508829,515973,521056,521660,523459,527039,530436,533818,539153	499489,500601,505927,507593,508970,516185,521273,521941,523913,527230,530745,533981,539529	Gene ID= ENSG00000174227.15 TPM= 2.12 Transcript Type= protein_coding
chr4	663705	670753	663705	670753	+	transcript60.chr4.nic@PDE6B	transcript60.chr4.nic	protein_coding	663705,664114,664881,665255,666531,667856,670046	663870,664221,664944,665329,666614,668006,670753	Gene ID= ENSG00000133256.12 TPM= 2.12 Transcript Type= NA
chr4	672438	673821	672438	673821	-	ENST00000506525.5@ATP5I	ENST00000506525.5	protein_coding	673507,673303,672438	673821,673401,672519	Gene ID= ENSG00000169020.9 TPM= 4.46 Transcript Type= processed_transcript
chr4	672438	674330	672438	674330	-	ENST00000505852.1@ATP5I	ENST00000505852.1	protein_coding	674212,673303,672438	674330,673401,672519	Gene ID= ENSG00000169020.9 TPM= 74.56 Transcript Type= processed_transcript
chr4	672436	674338	672436	674338	-	ENST00000304312.4@ATP5I	ENST00000304312.4	protein_coding	674212,673912,673303,672436	674338,673966,673401,672519	Gene ID= ENSG00000169020.9 TPM= 797.36 Transcript Type= protein_coding
chr4	672436	674121	672436	674121	-	ENST00000515202.5@ATP5I	ENST00000515202.5	protein_coding	673912,673303,672436	674121,673401,672519	Gene ID= ENSG00000169020.9 TPM= 13.49 Transcript Type= retained_intron
chr4	681829	689441	681829	689441	-	ENST00000322224.8@MFSD7	ENST00000322224.8	protein_coding	688993,686532,686089,685835,684719,684483,683609,683210,682781,681829	689441,686690,686302,685911,684856,684599,683761,683367,682890,682376	Gene ID= ENSG00000169026.12 TPM= 3.72 Transcript Type= protein_coding
chr4	681858	689191	681858	689191	-	ENST00000515118.5@MFSD7	ENST00000515118.5	protein_coding	688993,686532,684719,684483,683609,683210,682781,681858	689191,686690,684856,684602,683761,683367,682890,682376	Gene ID= ENSG00000169026.12 TPM= 7.44 Transcript Type= protein_coding
chr4	705765	770640	705765	770640	+	ENST00000362003.9@PCGF3	ENST00000362003.9	protein_coding	705765,730630,730970,733672,734931,737466,743474,744600,761279,764984,766032	705970,730668,731110,733789,735027,737521,743584,744688,761416,765064,770640	Gene ID= ENSG00000185619.18 TPM= 3.19 Transcript Type= protein_coding
chr4	768189	770087	768189	770087	+	ENST00000620529.1@PCGF3	ENST00000620529.1	protein_coding	768189	770087	Gene ID= ENSG00000185619.18 TPM= 5.31 Transcript Type= protein_coding
chr4	705784	766608	705784	766608	+	ENST00000470161.6@PCGF3	ENST00000470161.6	protein_coding	705784,730630,730952,733672,734931,737466,743474,744600,761279,764984,766032	705970,730668,731110,733789,735027,737521,743584,744688,761416,765064,766608	Gene ID= ENSG00000185619.18 TPM= 14.87 Transcript Type= protein_coding
chr4	743986	744356	743986	744356	-	transcript92.chr4.nnic@NA	transcript92.chr4.nnic	NA	743986	744356	Gene ID= novel_gene_chr4_93 TPM= 2.12 Transcript Type= NA
chr4	756218	757173	756218	757173	-	transcript94.chr4.nnic@NA	transcript94.chr4.nnic	NA	756218	757173	Gene ID= novel_gene_chr4_95 TPM= 3.19 Transcript Type= NA
chr4	778601	781819	778601	781819	-	transcript90.chr4.nnic@NA	transcript90.chr4.nnic	NA	778601	781819	Gene ID= novel_gene_chr4_91 TPM= 4.25 Transcript Type= NA
chr4	784957	826198	784957	826198	-	ENST00000304062.10@CPLX1	ENST00000304062.10	protein_coding	826046,824492,792433,784957	826198,824601,792608,786698	Gene ID= ENSG00000168993.14 TPM= 15.93 Transcript Type= protein_coding
chr4	830942	836688	830942	836688	+	transcript100.chr4.nnic@NA	transcript100.chr4.nnic	NA	830942	836688	Gene ID= novel_gene_chr4_101 TPM= 6.37 Transcript Type= NA
chr4	836802	841320	836802	841320	+	transcript104.chr4.nnic@NA	transcript104.chr4.nnic	NA	836802	841320	Gene ID= novel_gene_chr4_105 TPM= 5.31 Transcript Type= NA
chr4	885783	894827	885783	894827	-	ENST00000504435.1@GAK	ENST00000504435.1	protein_coding	893874,893377,890532,885783	894827,893489,890622,888970	Gene ID= ENSG00000178950.16 TPM= 1.06 Transcript Type= retained_intron
chr4	849278	932298	849278	932298	-	ENST00000314167.8@GAK	ENST00000314167.8	protein_coding	932043,913607,912735,911673,904637,898033,896460,893874,893377,890532,888847,884037,883315,882697,881907,877615,877090,876530,870711,868539,866956,866364,865122,859606,851750,850936,849892,849278	932298,913668,912794,911787,904779,898158,896549,894009,893489,890622,888970,884086,883463,882819,882040,877809,877207,876609,870904,868685,867432,866534,865244,859722,851974,851084,850068,849774	Gene ID= ENSG00000178950.16 TPM= 29.74 Transcript Type= protein_coding
chr4	849308	867162	849308	867162	-	ENST00000511980.5@GAK	ENST00000511980.5	protein_coding	866956,866364,865122,859606,859362,851750,850936,849892,849308	867162,866534,865244,859722,859493,851974,851084,850068,849774	Gene ID= ENSG00000178950.16 TPM= 1.06 Transcript Type= protein_coding
chr4	899862	902612	899862	902612	+	transcript117.chr4.nnic@NA	transcript117.chr4.nnic	NA	899862	902612	Gene ID= novel_gene_chr4_118 TPM= 10.62 Transcript Type= NA
chr4	932394	958656	932394	958656	+	transcript123.chr4.nic@TMEM175	transcript123.chr4.nic	protein_coding	932394,947709,948116,948411,950421,951207,951682,952367,953190,955405,955755,957824	932540,947892,948154,948615,950518,951258,951717,952450,953354,955483,955890,958656	Gene ID= ENSG00000127419.16 TPM= 3.82 Transcript Type= NA
chr4	932460	958656	932460	958656	+	transcript124.chr4.nic@TMEM175	transcript124.chr4.nic	protein_coding	932460,947709,948116,950421,951207,951646,952367,953190,955405,955755,957824	932540,947892,948154,950518,951258,951717,952450,953354,955483,955890,958656	Gene ID= ENSG00000127419.16 TPM= 3.82 Transcript Type= NA
chr4	932387	958656	932387	958656	+	ENST00000264771.8@TMEM175	ENST00000264771.8	protein_coding	932387,947709,948116,950421,951207,951682,952367,953190,955405,955755,957824	932540,947892,948154,950518,951258,951717,952450,953354,955483,955890,958656	Gene ID= ENSG00000127419.16 TPM= 19.76 Transcript Type= protein_coding
chr4	932461	958656	932461	958656	+	transcript126.chr4.nic@TMEM175	transcript126.chr4.nic	protein_coding	932461,947709,948116,950421,951207,951646,952367,953190,955405,955755,957824	932540,947892,948615,950518,951258,951717,952450,953354,955483,955890,958656	Gene ID= ENSG00000127419.16 TPM= 3.82 Transcript Type= NA
chr4	932472	958656	932472	958656	+	ENST00000438836.6@TMEM175	ENST00000438836.6	protein_coding	932472,947709,948116,950421,951207,951682,952367,953190,955405,955755,957824	932540,947892,948615,950518,951258,951717,952450,953354,955483,955890,958656	Gene ID= ENSG00000127419.16 TPM= 7.01 Transcript Type= retained_intron
chr4	956445	958339	956445	958339	-	transcript139.chr4.nnic@NA	transcript139.chr4.nnic	NA	956445	958339	Gene ID= novel_gene_chr4_140 TPM= 7.44 Transcript Type= NA
chr4	958887	973556	958887	973556	-	ENST00000273814.7@DGKQ	ENST00000273814.7	protein_coding	973212,970993,968811,968479,968282,967880,967728,967549,967129,966964,966748,966466,965928,965491,965176,963139,962772,962435,961982,961688,961467,961049,958887	973556,971072,968910,968564,968407,968027,967802,967649,967361,967054,966802,966527,966078,965529,965291,963290,962920,962613,962082,961834,961578,961201,960721	Gene ID= ENSG00000145214.13 TPM= 11.68 Transcript Type= protein_coding
chr4	986997	1004506	986997	1004506	+	ENST00000247933.8@IDUA	ENST00000247933.8	protein_coding	986997,987809,1000612,1000882,1001468,1001679,1001982,1002269,1002732,1003036,1003345,1003549,1004012,1004260	987242,987949,1000697,1000989,1001563,1001881,1002161,1002485,1002944,1003157,1003470,1003625,1004112,1004506	Gene ID= ENSG00000127415.12 TPM= 8.5 Transcript Type= protein_coding
chr4	995048	998777	995048	998777	-	transcript145.chr4.nnic@NA	transcript145.chr4.nnic	NA	995048	998777	Gene ID= novel_gene_chr4_146 TPM= 3.19 Transcript Type= NA
chr4	1011625	1026891	1011625	1026891	+	transcript148.chr4.nnic@FGFRL1	transcript148.chr4.nnic	protein_coding	1011625,1012470,1022203,1023641,1023817,1024311,1024905	1011987,1012564,1022475,1023721,1024101,1024664,1026891	Gene ID= ENSG00000127418.14 TPM= 19.65 Transcript Type= NA
chr4	1012451	1026897	1012451	1026897	+	ENST00000264748.6@FGFRL1	ENST00000264748.6	protein_coding	1012451,1022203,1023641,1023817,1024311,1024905	1012564,1022475,1023721,1024101,1024664,1026897	Gene ID= ENSG00000127418.14 TPM= 19.65 Transcript Type= protein_coding
chr4	1166932	1172873	1166932	1172873	-	ENST00000290902.9@SPON2	ENST00000290902.9	protein_coding	1172544,1171852,1171263,1170999,1170402,1166932	1172873,1172074,1171486,1171190,1170576,1167656	Gene ID= ENSG00000159674.11 TPM= 33.99 Transcript Type= protein_coding
chr4	1211448	1248728	1211448	1248728	-	transcript158.chr4.nic@CTBP1	transcript158.chr4.nic	protein_coding	1248661,1241325,1238183,1228199,1225360,1215991,1214343,1213478,1212913,1211448	1248728,1241519,1238337,1228343,1225566,1216205,1214473,1213605,1213030,1212423	Gene ID= ENSG00000159692.15 TPM= 48.51 Transcript Type= NA
chr4	1211448	1249137	1211448	1249137	-	ENST00000290921.10@CTBP1	ENST00000290921.10	protein_coding	1248916,1238183,1228199,1225360,1215991,1214343,1213478,1212913,1211448	1249137,1238337,1228343,1225566,1216205,1214473,1213605,1213030,1212423	Gene ID= ENSG00000159692.15 TPM= 104.8 Transcript Type= protein_coding
chr4	1211448	1249112	1211448	1249112	-	ENST00000382952.7@CTBP1	ENST00000382952.7	protein_coding	1248916,1241325,1238183,1228199,1225360,1215991,1214343,1213478,1212913,1211448	1249112,1241519,1238337,1228343,1225566,1216205,1214473,1213605,1213030,1212423	Gene ID= ENSG00000159692.15 TPM= 231.2 Transcript Type= protein_coding
chr4	1232317	1235598	1232317	1235598	-	transcript179.chr4.nnic@NA	transcript179.chr4.nnic	NA	1232317	1235598	Gene ID= novel_gene_chr4_180 TPM= 4.25 Transcript Type= NA
chr4	1248935	1252608	1248935	1252608	+	transcript177.chr4.nnic@NA	transcript177.chr4.nnic	NA	1248935	1252608	Gene ID= novel_gene_chr4_178 TPM= 22.31 Transcript Type= NA
chr4	1289839	1340137	1289839	1340137	+	transcript192.chr4.nic@MAEA	transcript192.chr4.nic	protein_coding	1289839,1311979,1315397,1322381,1332757,1336861,1338422,1339074	1289982,1312161,1315600,1322503,1332865,1336994,1338617,1340137	Gene ID= ENSG00000090316.15 TPM= 10.89 Transcript Type= NA
chr4	1289851	1340137	1289851	1340137	+	ENST00000303400.8@MAEA	ENST00000303400.8	protein_coding	1289851,1311979,1315397,1322381,1327627,1332757,1336861,1338422,1339074	1289982,1312161,1315600,1322503,1327703,1332865,1336994,1338617,1340137	Gene ID= ENSG00000090316.15 TPM= 163.13 Transcript Type= protein_coding
chr4	1317101	1319750	1317101	1319750	+	transcript204.chr4.nnic@NA	transcript204.chr4.nnic	NA	1317101	1319750	Gene ID= novel_gene_chr4_205 TPM= 2.12 Transcript Type= NA
chr4	1692800	1712555	1692800	1712555	-	ENST00000489418.5@SLBP	ENST00000489418.5	protein_coding	1712130,1711874,1703596,1700011,1699564,1696202,1694774,1692800	1712555,1711990,1703700,1700070,1699701,1696351,1694840,1693713	Gene ID= ENSG00000163950.12 TPM= 32.93 Transcript Type= protein_coding
chr4	1712821	1713622	1712821	1713622	+	ENST00000605571.1@AC016773.1	ENST00000605571.1	lincRNA	1712821	1713622	Gene ID= ENSG00000270195.1 TPM= 1.06 Transcript Type= lincRNA
chr4	1715953	1721352	1715953	1721352	-	transcript217.chr4.nnic@TMEM129	transcript217.chr4.nnic	protein_coding	1720977,1720633,1718152,1717516,1715953	1721352,1720934,1718626,1717675,1717428	Gene ID= ENSG00000168936.10 TPM= 45.9 Transcript Type= NA
chr4	1715953	1721368	1715953	1721368	-	transcript218.chr4.nnic@TMEM129	transcript218.chr4.nnic	protein_coding	1721019,1720633,1718152,1717516,1715953	1721368,1720934,1718626,1717675,1717428	Gene ID= ENSG00000168936.10 TPM= 46.96 Transcript Type= NA
chr4	1715952	1721352	1715952	1721352	-	transcript228.chr4.nnic@TMEM129	transcript228.chr4.nnic	protein_coding	1720977,1720633,1718152,1715952	1721352,1720934,1718626,1717428	Gene ID= ENSG00000168936.10 TPM= 10.84 Transcript Type= NA
chr4	1715952	1721368	1715952	1721368	-	transcript229.chr4.nnic@TMEM129	transcript229.chr4.nnic	protein_coding	1721019,1720633,1718152,1715952	1721368,1720934,1718626,1717428	Gene ID= ENSG00000168936.10 TPM= 10.84 Transcript Type= NA
chr4	1715953	1721331	1715953	1721331	-	ENST00000382936.7@TMEM129	ENST00000382936.7	protein_coding	1720633,1718152,1717516,1715953	1721331,1718626,1717675,1717428	Gene ID= ENSG00000168936.10 TPM= 38.46 Transcript Type= protein_coding
chr4	1715952	1721313	1715952	1721313	-	transcript239.chr4.nnic@TMEM129	transcript239.chr4.nnic	protein_coding	1721041,1715952	1721313,1720957	Gene ID= ENSG00000168936.10 TPM= 6.37 Transcript Type= NA
chr4	1811479	1856247	1811479	1856247	-	ENST00000302787.2@LETM1	ENST00000302787.2	protein_coding	1855869,1849149,1841347,1836429,1834845,1832744,1825564,1823644,1822988,1822181,1819338,1816727,1815664,1811479	1856247,1849209,1841797,1836572,1834982,1832947,1825683,1823775,1823131,1822312,1819472,1816914,1815802,1814573	Gene ID= ENSG00000168924.14 TPM= 31.86 Transcript Type= protein_coding
chr4	1871382	1943544	1871382	1943544	+	transcript264.chr4.nic@NSD2	transcript264.chr4.nic	protein_coding	1871382,1892166,1893730,1900626,1904216,1916871,1918141,1930626,1935144,1938451,1939654,1942339	1871542,1892263,1893909,1901251,1904378,1917037,1918623,1930770,1935262,1938532,1939778,1943544	Gene ID= ENSG00000109685.17 TPM= 3.35 Transcript Type= NA
chr4	1871289	1943437	1871289	1943437	+	transcript266.chr4.nnic@NSD2	transcript266.chr4.nnic	protein_coding	1871289,1871437,1900626,1904216,1916871,1918141,1930626,1935144,1938451,1939654,1942339	1871344,1871542,1901251,1904378,1917037,1918623,1930770,1935262,1938532,1939778,1943437	Gene ID= ENSG00000109685.17 TPM= 2.81 Transcript Type= NA
chr4	1871285	1943544	1871285	1943544	+	transcript273.chr4.nic@NSD2	transcript273.chr4.nic	protein_coding	1871285,1900626,1904216,1916871,1918141,1930626,1935144,1938451,1939654,1942339	1871542,1901251,1904378,1917037,1918623,1930770,1935262,1938532,1939778,1943544	Gene ID= ENSG00000109685.17 TPM= 4.41 Transcript Type= NA
chr4	1871461	1941750	1871461	1941750	+	ENST00000514045.5@NSD2	ENST00000514045.5	protein_coding	1871461,1900626,1904216,1916871,1918141,1930626,1935144,1938451,1939654	1871542,1901251,1904378,1917037,1918623,1930770,1935262,1938532,1941750	Gene ID= ENSG00000109685.17 TPM= 2.55 Transcript Type= protein_coding
chr4	1982714	2010110	1982714	2010110	-	ENST00000382882.7@NELFA	ENST00000382882.7	protein_coding	2008750,1991544,1989708,1987918,1986272,1986114,1985776,1984808,1983848,1983596,1982714	2010110,1991715,1989869,1988007,1986402,1986183,1985864,1984919,1984113,1983695,1983503	Gene ID= ENSG00000185049.14 TPM= 30.8 Transcript Type= protein_coding
chr4	1982723	2008975	1982723	2008975	-	ENST00000411638.6@NELFA	ENST00000411638.6	protein_coding	2008750,1991544,1989708,1987918,1986272,1986114,1985776,1984808,1983848,1983596,1982723	2008975,1991715,1989869,1988007,1986402,1986183,1985864,1984919,1984113,1983695,1983503	Gene ID= ENSG00000185049.14 TPM= 20.18 Transcript Type= protein_coding
chr4	1988948	1990255	1988948	1990255	-	transcript286.chr4.nnic@NA	transcript286.chr4.nnic	NA	1988948	1990255	Gene ID= novel_gene_chr4_287 TPM= 2.12 Transcript Type= NA
chr4	2041993	2043970	2041993	2043970	+	ENST00000409248.8@C4orf48	ENST00000409248.8	protein_coding	2041993,2042327,2042736,2043861	2042068,2042484,2042824,2043970	Gene ID= ENSG00000243449.6 TPM= 18.59 Transcript Type= protein_coding
chr4	2042050	2043964	2042050	2043964	+	ENST00000409860.1@C4orf48	ENST00000409860.1	protein_coding	2042050,2042327,2042736,2043861	2042175,2042484,2042824,2043964	Gene ID= ENSG00000243449.6 TPM= 1.59 Transcript Type= protein_coding
chr4	2231841	2242164	2231841	2242164	-	ENST00000443786.2@HAUS3	ENST00000443786.2	protein_coding	2242051,2241520,2240038,2238604,2236228,2231841	2242164,2241790,2241093,2239043,2236456,2232160	Gene ID= ENSG00000214367.7 TPM= 2.66 Transcript Type= protein_coding
chr4	2231841	2242124	2231841	2242124	-	transcript295.chr4.nic@HAUS3	transcript295.chr4.nic	protein_coding	2241520,2240038,2238604,2236228,2231841	2242124,2241093,2239043,2236456,2232160	Gene ID= ENSG00000214367.7 TPM= 5.84 Transcript Type= NA
chr4	2228349	2242133	2228349	2242133	-	ENST00000243706.8@HAUS3	ENST00000243706.8	protein_coding	2242051,2240038,2238604,2236228,2228349	2242133,2241093,2239043,2236456,2232160	Gene ID= ENSG00000214367.7 TPM= 1.06 Transcript Type= protein_coding
chr4	2247432	2262294	2247432	2262294	-	ENST00000337190.6@MXD4	ENST00000337190.6	protein_coding	2261917,2261725,2257982,2252408,2251084,2247432	2262294,2261824,2258011,2252522,2251246,2250701	Gene ID= ENSG00000123933.16 TPM= 47.8 Transcript Type= protein_coding
chr4	2371477	2418764	2371477	2418764	-	transcript310.chr4.nnic@ZFYVE28	transcript310.chr4.nnic	protein_coding	2418285,2374352,2371477	2418764,2374444,2373165	Gene ID= ENSG00000159733.13 TPM= 5.31 Transcript Type= NA
chr4	2392993	2397493	2392993	2397493	+	transcript311.chr4.nnic@NA	transcript311.chr4.nnic	NA	2392993,2396780	2396125,2397493	Gene ID= novel_gene_chr4_312 TPM= 3.19 Transcript Type= NA
chr4	2468937	2515855	2468937	2515855	+	ENST00000314289.12@RNF4	ENST00000314289.12	protein_coding	2468937,2490337,2497007,2500659,2511956,2512438,2513083,2513670	2469258,2490502,2497121,2500738,2511965,2512597,2513131,2515855	Gene ID= ENSG00000063978.15 TPM= 53.11 Transcript Type= protein_coding
chr4	2469107	2502686	2469107	2502686	+	transcript317.chr4.nic@RNF4	transcript317.chr4.nic	protein_coding	2469107,2490337,2497007,2500659	2469258,2490502,2497121,2502686	Gene ID= ENSG00000063978.15 TPM= 2.12 Transcript Type= NA
chr4	2654421	2700501	2654421	2700501	+	ENST00000513350.2@FAM193A	ENST00000513350.2	protein_coding	2654421,2657803,2659558,2659812,2662838,2663109,2672121,2689506,2690698,2693586,2694946,2696363,2699680	2655129,2657880,2659670,2660054,2662991,2663288,2672372,2689704,2690970,2693874,2695129,2696593,2700501	Gene ID= ENSG00000125386.15 TPM= 7.44 Transcript Type= protein_coding
chr4	2741660	2756376	2741660	2756376	-	ENST00000315423.11@TNIP2	ENST00000315423.11	protein_coding	2756014,2747655,2745446,2744697,2744387,2741660	2756376,2747945,2745535,2744945,2744506,2742520	Gene ID= ENSG00000168884.14 TPM= 78.6 Transcript Type= protein_coding
chr4	2741698	2756342	2741698	2756342	-	ENST00000503235.1@TNIP2	ENST00000503235.1	protein_coding	2756014,2747655,2745446,2744387,2741698	2756342,2747945,2745535,2744506,2742520	Gene ID= ENSG00000168884.14 TPM= 1.06 Transcript Type= protein_coding
chr4	2829601	2837044	2829601	2837044	+	transcript337.chr4.nic@SH3BP2	transcript337.chr4.nic	protein_coding	2829601,2831571,2831923,2832331,2832990,2833697	2830147,2831679,2831978,2832412,2833049,2837044	Gene ID= ENSG00000087266.15 TPM= 11.68 Transcript Type= NA
chr4	2843837	2930062	2843837	2930062	+	transcript340.chr4.nic@ADD1	transcript340.chr4.nic	protein_coding	2843837,2875896,2881898,2884515,2894013,2894582,2898184,2898433,2899259,2904764,2907743,2908515,2909339,2914884,2926014,2926642,2928171	2844024,2876110,2882060,2884666,2894093,2894731,2898327,2898531,2899435,2905015,2907844,2908604,2909431,2915040,2926112,2926675,2930062	Gene ID= ENSG00000087274.16 TPM= 22.86 Transcript Type= NA
chr4	2843898	2930073	2843898	2930073	+	transcript343.chr4.nic@ADD1	transcript343.chr4.nic	protein_coding	2843898,2875896,2881898,2884515,2894013,2894582,2898184,2898433,2899259,2904764,2907743,2908515,2909339,2914884,2926014,2928171	2844024,2876110,2882060,2884666,2894093,2894731,2898327,2898531,2899435,2905015,2907844,2908604,2909431,2915040,2926112,2930073	Gene ID= ENSG00000087274.16 TPM= 29.23 Transcript Type= NA
chr4	2843837	2930073	2843837	2930073	+	transcript347.chr4.nic@ADD1	transcript347.chr4.nic	protein_coding	2843837,2875896,2881898,2884515,2894013,2894582,2898184,2898433,2899259,2904764,2907743,2908515,2909339,2914884,2926014,2928171	2844024,2876110,2882060,2884666,2894093,2894731,2898327,2898531,2899435,2905108,2907844,2908604,2909431,2915040,2926112,2930073	Gene ID= ENSG00000087274.16 TPM= 29.23 Transcript Type= NA
chr4	2843837	2930073	2843837	2930073	+	transcript349.chr4.nic@ADD1	transcript349.chr4.nic	protein_coding	2843837,2875896,2881898,2884515,2894013,2894582,2898184,2898433,2899259,2904764,2907743,2908515,2914884,2926014,2928171	2844024,2876110,2882060,2884666,2894093,2894731,2898327,2898531,2899435,2905015,2907844,2908604,2915040,2926112,2930073	Gene ID= ENSG00000087274.16 TPM= 55.26 Transcript Type= NA
chr4	2843837	2906405	2843837	2906405	+	transcript354.chr4.nnic@ADD1	transcript354.chr4.nnic	protein_coding	2843837,2875896,2881898,2884515,2894013,2894582,2898184,2898433,2899160,2904764	2844024,2876110,2882060,2884666,2894093,2894731,2898327,2898531,2899435,2906405	Gene ID= ENSG00000087274.16 TPM= 2.25 Transcript Type= NA
chr4	2843837	2906405	2843837	2906405	+	transcript355.chr4.nic@ADD1	transcript355.chr4.nic	protein_coding	2843837,2875896,2881898,2884515,2894013,2894582,2898184,2898433,2899259,2904764	2844024,2876110,2882060,2884666,2894093,2894731,2898327,2898531,2899435,2906405	Gene ID= ENSG00000087274.16 TPM= 3.31 Transcript Type= NA
chr4	2843837	2903037	2843837	2903037	+	transcript356.chr4.nnic@ADD1	transcript356.chr4.nnic	protein_coding	2843837,2875896,2881898,2884515,2894013,2894582,2898184,2898433,2899259,2902009	2844024,2876110,2882060,2884666,2894093,2894731,2898327,2898531,2901699,2903037	Gene ID= ENSG00000087274.16 TPM= 3.31 Transcript Type= NA
chr4	2843857	2930073	2843857	2930073	+	ENST00000264758.11@ADD1	ENST00000264758.11	protein_coding	2843857,2875896,2881898,2884515,2894013,2894582,2898184,2898433,2899259,2904764,2907743,2908515,2914884,2926014,2928171	2844024,2876110,2882060,2884666,2894093,2894731,2898327,2898531,2899435,2905108,2907844,2908604,2915040,2926112,2930073	Gene ID= ENSG00000087274.16 TPM= 39.33 Transcript Type= protein_coding
chr4	2920659	2921371	2920659	2921371	-	transcript362.chr4.nnic@NA	transcript362.chr4.nnic	NA	2920659	2921371	Gene ID= novel_gene_chr4_363 TPM= 3.19 Transcript Type= NA
chr4	2930565	2934859	2930565	2934859	-	ENST00000355443.8@MFSD10	ENST00000355443.8	protein_coding	2934769,2933753,2933567,2933106,2932600,2932351,2932045,2931825,2931555,2931375,2931227,2931061,2930565	2934859,2933944,2933663,2933209,2932758,2932512,2932153,2931936,2931663,2931465,2931274,2931150,2930953	Gene ID= ENSG00000109736.14 TPM= 35.32 Transcript Type= protein_coding
chr4	2930561	2934859	2930561	2934859	-	transcript365.chr4.nic@MFSD10	transcript365.chr4.nic	protein_coding	2934769,2933753,2933567,2933106,2932600,2932351,2932045,2931825,2931555,2931375,2931227,2930561	2934859,2933944,2933663,2933209,2932758,2932512,2932153,2931936,2931663,2931465,2931274,2931150	Gene ID= ENSG00000109736.14 TPM= 4.51 Transcript Type= NA
chr4	2930568	2934859	2930568	2934859	-	transcript366.chr4.nic@MFSD10	transcript366.chr4.nic	protein_coding	2934769,2933753,2933567,2932600,2932351,2932045,2931825,2931555,2931375,2931227,2931061,2930568	2934859,2933944,2933663,2933209,2932512,2932153,2931936,2931663,2931465,2931274,2931150,2930953	Gene ID= ENSG00000109736.14 TPM= 5.58 Transcript Type= NA
chr4	2930561	2934859	2930561	2934859	-	transcript371.chr4.nic@MFSD10	transcript371.chr4.nic	protein_coding	2934769,2933753,2933567,2933106,2932600,2932351,2932045,2931825,2931375,2931227,2930561	2934859,2933944,2933663,2933209,2932758,2932512,2932153,2931936,2931465,2931274,2931150	Gene ID= ENSG00000109736.14 TPM= 3.45 Transcript Type= NA
chr4	2930611	2934834	2930611	2934834	-	ENST00000507555.1@MFSD10	ENST00000507555.1	protein_coding	2934769,2933753,2933567,2933106,2932600,2932351,2932045,2931825,2931375,2931227,2931061,2930611	2934834,2933944,2933663,2933209,2932758,2932512,2932153,2931936,2931465,2931274,2931150,2930953	Gene ID= ENSG00000109736.14 TPM= 9.56 Transcript Type= protein_coding
chr4	2934892	2936371	2934892	2936371	+	transcript400.chr4.nnic@NA	transcript400.chr4.nnic	NA	2934892	2936371	Gene ID= novel_gene_chr4_401 TPM= 5.31 Transcript Type= NA
chr4	2938114	2963468	2938114	2963468	-	transcript379.chr4.nnic@NOP14	transcript379.chr4.nnic	protein_coding	2963125,2957606,2956670,2954424,2953511,2952275,2951114,2949934,2948278,2947526,2946412,2945128,2944073,2942192,2941582,2939527,2939188,2938805,2938114	2963468,2957740,2956811,2954563,2953645,2952397,2951245,2950213,2948408,2947611,2946547,2945229,2944226,2942351,2941729,2939645,2939343,2938930,2938327	Gene ID= ENSG00000087269.15 TPM= 4.25 Transcript Type= NA
chr4	2937942	2963368	2937942	2963368	-	ENST00000314262.10@NOP14	ENST00000314262.10	protein_coding	2963125,2957606,2956670,2954424,2953511,2952275,2951114,2949934,2948278,2947526,2946412,2945128,2944073,2942192,2941582,2939527,2939188,2938812,2937942	2963368,2957740,2956811,2954563,2953645,2952397,2951245,2950213,2948408,2947611,2946547,2945229,2944226,2942351,2941729,2939645,2939343,2938930,2938188	Gene ID= ENSG00000087269.15 TPM= 3.19 Transcript Type= protein_coding
chr4	2963634	2966889	2963634	2966889	+	ENST00000503518.2@GRK4	ENST00000503518.2	protein_coding	2963634,2965243	2964122,2966889	Gene ID= ENSG00000125388.19 TPM= 1.06 Transcript Type= protein_coding
chr4	2976633	2978917	2976633	2978917	-	transcript402.chr4.nnic@NA	transcript402.chr4.nnic	NA	2976633	2978917	Gene ID= novel_gene_chr4_403 TPM= 5.31 Transcript Type= NA
chr4	3291350	3292784	3291350	3292784	-	transcript406.chr4.nnic@NA	transcript406.chr4.nnic	NA	3291350	3292784	Gene ID= novel_gene_chr4_407 TPM= 7.44 Transcript Type= NA
chr4	3375118	3379509	3375118	3379509	+	transcript417.chr4.nnic@NA	transcript417.chr4.nnic	NA	3375118	3379509	Gene ID= novel_gene_chr4_418 TPM= 3.19 Transcript Type= NA
chr4	3463287	3501503	3463287	3501503	+	transcript422.chr4.nnic@DOK7	transcript422.chr4.nnic	protein_coding	3463287,3463506,3473406,3476342,3485539,3489677,3492759,3496820,3500251,3500692	3463429,3463551,3473636,3476542,3485658,3489796,3493483,3496862,3500403,3501503	Gene ID= ENSG00000175920.16 TPM= 8.5 Transcript Type= NA
chr4	3463341	3494481	3463341	3494481	+	transcript435.chr4.nic@DOK7	transcript435.chr4.nic	protein_coding	3463341,3473406,3476342,3485539,3489677,3492759	3463551,3473636,3476542,3485658,3489796,3494481	Gene ID= ENSG00000175920.16 TPM= 18.59 Transcript Type= NA
chr4	3463311	3494483	3463311	3494483	+	ENST00000340083.5@DOK7	ENST00000340083.5	protein_coding	3463311,3463506,3473406,3476342,3485539,3489677,3492759	3463429,3463551,3473636,3476542,3485658,3489796,3494483	Gene ID= ENSG00000175920.16 TPM= 133.3 Transcript Type= protein_coding
chr4	3463311	3494483	3463311	3494483	+	ENST00000507039.5@DOK7	ENST00000507039.5	protein_coding	3463311,3463506,3473406,3476342,3485539,3489677,3492759	3463429,3463551,3473636,3476531,3485658,3489796,3494483	Gene ID= ENSG00000175920.16 TPM= 27.09 Transcript Type= protein_coding
chr4	3506376	3532559	3506376	3532559	-	ENST00000500728.2@LRPAP1	ENST00000500728.2	protein_coding	3532209,3524907,3520072,3518871,3518034,3516116,3514752,3506376	3532559,3525051,3520193,3518991,3518192,3516198,3514928,3513036	Gene ID= ENSG00000163956.10 TPM= 2.12 Transcript Type= protein_coding
chr4	3512567	3532422	3512567	3532422	-	transcript449.chr4.nnic@LRPAP1	transcript449.chr4.nnic	protein_coding	3532209,3524907,3520072,3518871,3518034,3514752,3512567	3532422,3525051,3520193,3518991,3518192,3514928,3513036	Gene ID= ENSG00000163956.10 TPM= 32.93 Transcript Type= NA
chr4	3766398	3768526	3766398	3768526	+	ENST00000330055.6@ADRA2C	ENST00000330055.6	protein_coding	3766398	3768526	Gene ID= ENSG00000184160.7 TPM= 8.5 Transcript Type= protein_coding
chr4	3941934	3942761	3941934	3942761	-	transcript456.chr4.nnic@NA	transcript456.chr4.nnic	NA	3941934	3942761	Gene ID= novel_gene_chr4_457 TPM= 3.19 Transcript Type= NA
chr4	4235553	4248212	4235553	4248212	-	ENST00000382753.4@TMEM128	ENST00000382753.4	protein_coding	4248106,4246202,4240321,4237827,4235553	4248212,4246343,4240479,4237935,4236256	Gene ID= ENSG00000132406.11 TPM= 12.75 Transcript Type= protein_coding
chr4	4274615	4290196	4274615	4290196	-	transcript464.chr4.nic@LYAR	transcript464.chr4.nic	protein_coding	4290036,4286519,4283621,4281783,4279642,4279447,4274615	4290196,4286572,4283795,4281897,4279749,4279530,4274769	Gene ID= ENSG00000145220.13 TPM= 10.62 Transcript Type= NA
chr4	4267701	4290169	4267701	4290169	-	ENST00000343470.8@LYAR	ENST00000343470.8	protein_coding	4290036,4286519,4283621,4281783,4279642,4279447,4274367,4273583,4268530,4267701	4290169,4286572,4283795,4281897,4279749,4279530,4274769,4273669,4268615,4268023	Gene ID= ENSG00000145220.13 TPM= 19.12 Transcript Type= protein_coding
chr4	4290251	4321786	4290251	4321786	+	ENST00000337872.8@ZBTB49	ENST00000337872.8	protein_coding	4290251,4299927,4301989,4306138,4313041,4315636,4315809,4320640	4290352,4300097,4303091,4306184,4313114,4315718,4315970,4321786	Gene ID= ENSG00000168826.15 TPM= 15.93 Transcript Type= protein_coding
chr4	4348140	4419058	4348140	4419058	+	ENST00000421177.6@HGNC:18790	ENST00000421177.6	protein_coding	4348140,4380983,4385060,4385473,4385857,4387604,4391475,4409573,4417235	4348471,4381073,4385201,4385555,4387173,4387758,4391591,4409683,4419058	Gene ID= ENSG00000168824.14 TPM= 3.19 Transcript Type= protein_coding
chr4	4418968	4542028	4418968	4542028	-	ENST00000306200.6@STX18	ENST00000306200.6	protein_coding	4541797,4471639,4459372,4457423,4457191,4438394,4434770,4425164,4423518,4420864,4418968	4542028,4471706,4459487,4457500,4457257,4438509,4434858,4425222,4423587,4420944,4420129	Gene ID= ENSG00000168818.9 TPM= 4.25 Transcript Type= protein_coding
chr4	4859666	4863936	4859666	4863936	+	ENST00000382723.4@MSX1	ENST00000382723.4	protein_coding	4859666,4862701	4860368,4863936	Gene ID= ENSG00000163132.6 TPM= 7.44 Transcript Type= protein_coding
chr4	5562439	5708567	5562439	5708567	-	ENST00000344408.9@EVC2	ENST00000344408.9	protein_coding	5708286,5697593,5694335,5691265,5689157,5685370,5681260,5665515,5663107,5640514,5631793,5628559,5625749,5622537,5618478,5615422,5584623,5576240,5574685,5568444,5565258,5562439	5708567,5697647,5694501,5691333,5689343,5685479,5681313,5665649,5663246,5640838,5632032,5628734,5625908,5622991,5618682,5615544,5584850,5576454,5574772,5568640,5565359,5563115	Gene ID= ENSG00000173040.12 TPM= 2.12 Transcript Type= protein_coding
chr4	5812395	5829036	5812395	5829036	+	transcript486.chr4.nnic@EVC	transcript486.chr4.nnic	protein_coding	5812395,5818211,5823617,5828519	5814162,5818254,5823820,5829036	Gene ID= ENSG00000072840.12 TPM= 3.72 Transcript Type= NA
chr4	5820783	5888481	5820783	5888481	-	ENST00000397890.6@CRMP1	ENST00000397890.6	protein_coding	5888228,5866668,5861026,5856143,5851408,5849392,5843093,5841308,5839522,5836765,5835915,5828489,5825494,5820783	5888481,5866756,5861210,5856307,5851469,5849472,5843161,5841428,5839678,5836906,5836085,5828668,5825659,5821851	Gene ID= ENSG00000072832.14 TPM= 4.25 Transcript Type= protein_coding
chr4	5819923	5823023	5819923	5823023	+	transcript490.chr4.nnic@NA	transcript490.chr4.nnic	NA	5819923	5823023	Gene ID= novel_gene_chr4_491 TPM= 2.12 Transcript Type= NA
chr4	5826316	5829050	5826316	5829050	+	transcript492.chr4.nnic@NA	transcript492.chr4.nnic	NA	5826316	5829050	Gene ID= novel_gene_chr4_493 TPM= 2.66 Transcript Type= NA
chr4	6277262	6303265	6277262	6303265	+	transcript498.chr4.nic@WFS1	transcript498.chr4.nic	protein_coding	6277262,6287093,6288987,6291197,6291917,6295041,6300657	6277687,6287175,6289131,6291367,6291997,6295189,6303265	Gene ID= ENSG00000109501.13 TPM= 35.58 Transcript Type= NA
chr4	6269850	6303265	6269850	6303265	+	ENST00000226760.5@WFS1	ENST00000226760.5	protein_coding	6269850,6277451,6287093,6288987,6291197,6291917,6295041,6300657	6270014,6277687,6287175,6289131,6291367,6291997,6295189,6303265	Gene ID= ENSG00000109501.13 TPM= 86.57 Transcript Type= protein_coding
chr4	6575175	6623362	6575175	6623362	+	ENST00000285599.7@MAN2B2	ENST00000285599.7	protein_coding	6575175,6576578,6578393,6586996,6589045,6593173,6594534,6597113,6598198,6600623,6605055,6609107,6609798,6610880,6611086,6614218,6617380,6619927,6621188	6575348,6576724,6578498,6587168,6589160,6593350,6594732,6597303,6598354,6600756,6605329,6609298,6610050,6610990,6611278,6614355,6617492,6620044,6623362	Gene ID= ENSG00000013288.8 TPM= 5.31 Transcript Type= protein_coding
chr4	6640091	6642729	6640091	6642729	+	ENST00000320912.8@MRFAP1	ENST00000320912.8	protein_coding	6640091,6640828,6641730	6640708,6641258,6642729	Gene ID= ENSG00000179010.14 TPM= 116.31 Transcript Type= protein_coding
chr4	6640691	6642745	6640691	6642745	+	ENST00000382581.4@MRFAP1	ENST00000382581.4	protein_coding	6640691,6641730	6641258,6642745	Gene ID= ENSG00000179010.14 TPM= 171.54 Transcript Type= protein_coding
chr4	6644207	6646327	6644207	6646327	-	transcript516.chr4.nnic@NA	transcript516.chr4.nnic	NA	6644207	6646327	Gene ID= novel_gene_chr4_517 TPM= 4.25 Transcript Type= NA
chr4	6673451	6676047	6673451	6676047	+	ENST00000307533.10@AC093323.1	ENST00000307533.10	lincRNA	6673451,6674993	6674706,6676047	Gene ID= ENSG00000170846.16 TPM= 2.12 Transcript Type= lincRNA
chr4	6674088	6676047	6674088	6676047	+	ENST00000444232.3@AC093323.1	ENST00000444232.3	lincRNA	6674088,6674993	6674637,6676047	Gene ID= ENSG00000170846.16 TPM= 4.25 Transcript Type= lincRNA
chr4	6707701	6709880	6707701	6709880	-	ENST00000320848.6@MRFAP1L1	ENST00000320848.6	protein_coding	6709231,6707701	6709880,6708643	Gene ID= ENSG00000178988.10 TPM= 87.63 Transcript Type= protein_coding
chr4	6707701	6709827	6707701	6709827	-	ENST00000500563.2@MRFAP1L1	ENST00000500563.2	protein_coding	6707701	6709827	Gene ID= ENSG00000178988.10 TPM= 10.09 Transcript Type= retained_intron
chr4	6716055	6717671	6716055	6717671	+	ENST00000320776.4@BLOC1S4	ENST00000320776.4	protein_coding	6716055	6717671	Gene ID= ENSG00000186222.4 TPM= 3.19 Transcript Type= protein_coding
chr4	6782714	6864759	6782714	6864759	+	transcript532.chr4.nic@KIAA0232	transcript532.chr4.nic	protein_coding	6782714,6824185,6842067,6857164,6858425,6860901	6782841,6824684,6842204,6857230,6858506,6864759	Gene ID= ENSG00000170871.11 TPM= 7.44 Transcript Type= NA
chr4	6782642	6824684	6782642	6824684	+	ENST00000508423.1@KIAA0232	ENST00000508423.1	protein_coding	6782642,6824185	6782841,6824684	Gene ID= ENSG00000170871.11 TPM= 1.06 Transcript Type= protein_coding
chr4	6909444	7033118	6909444	7033118	+	ENST00000448507.5@TBC1D14	ENST00000448507.5	protein_coding	6909444,6923373,6967304,6994184,6996325,6999085,7001145,7004844,7006632,7009877,7010653,7014448,7025004,7030327	6909505,6924111,6967424,6994302,6996407,6999202,7001251,7004924,7006726,7009948,7010781,7014557,7025262,7033118	Gene ID= ENSG00000132405.18 TPM= 7.22 Transcript Type= protein_coding
chr4	6909765	7033111	6909765	7033111	+	transcript540.chr4.nnic@TBC1D14	transcript540.chr4.nnic	protein_coding	6909765,6923373,6967304,6994184,6996325,6999085,7001145,7004844,7006632,7010653,7014448,7025004,7030327	6909951,6924111,6967424,6994302,6996407,6999202,7001251,7004924,7006726,7010781,7014557,7025262,7033111	Gene ID= ENSG00000132405.18 TPM= 7.22 Transcript Type= NA
chr4	6987162	7033114	6987162	7033114	+	ENST00000451522.6@TBC1D14	ENST00000451522.6	protein_coding	6987162,6994184,6996325,6999085,7001145,7004844,7006632,7009877,7010653,7014448,7025004,7030327	6987349,6994302,6996407,6999202,7001251,7004924,7006726,7009948,7010781,7014557,7025262,7033114	Gene ID= ENSG00000132405.18 TPM= 8.28 Transcript Type= protein_coding
chr4	6987187	7033111	6987187	7033111	+	transcript543.chr4.nnic@TBC1D14	transcript543.chr4.nnic	protein_coding	6987187,6994184,6996325,6999085,7001145,7004844,7006632,7010653,7014448,7025004,7030327	6987349,6994302,6996407,6999202,7001251,7004924,7006726,7010781,7014557,7025262,7033111	Gene ID= ENSG00000132405.18 TPM= 9.35 Transcript Type= NA
chr4	6909845	7033111	6909845	7033111	+	ENST00000409757.8@TBC1D14	ENST00000409757.8	protein_coding	6909845,6923373,6967304,6994184,6996325,6999085,7001145,7004844,7006632,7009877,7010653,7014448,7025004,7030327	6909951,6924111,6967424,6994302,6996407,6999202,7001251,7004924,7006726,7009948,7010781,7014557,7025262,7033111	Gene ID= ENSG00000132405.18 TPM= 8.28 Transcript Type= protein_coding
chr4	6985921	6987034	6985921	6987034	-	transcript547.chr4.nnic@NA	transcript547.chr4.nnic	NA	6985921	6987034	Gene ID= novel_gene_chr4_548 TPM= 3.19 Transcript Type= NA
chr4	7040849	7042939	7040849	7042939	-	ENST00000310085.5@CCDC96	ENST00000310085.5	protein_coding	7040849	7042939	Gene ID= ENSG00000173013.5 TPM= 4.25 Transcript Type= protein_coding
chr4	7043391	7057952	7043391	7057952	+	ENST00000310074.7@TADA2B	ENST00000310074.7	protein_coding	7043391,7054062	7043849,7057952	Gene ID= ENSG00000173011.11 TPM= 41.42 Transcript Type= protein_coding
chr4	7058641	7060736	7058641	7060736	-	transcript563.chr4.nnic@NA	transcript563.chr4.nnic	NA	7058641	7060736	Gene ID= novel_gene_chr4_564 TPM= 3.19 Transcript Type= NA
chr4	7257206	7263224	7257206	7263224	+	transcript568.chr4.nnic@SORCS2	transcript568.chr4.nnic	protein_coding	7257206,7257556,7262837	7257248,7257790,7263224	Gene ID= ENSG00000184985.16 TPM= 2.12 Transcript Type= NA
chr4	7328020	7330655	7328020	7330655	-	transcript569.chr4.nnic@NA	transcript569.chr4.nnic	NA	7328020	7330655	Gene ID= novel_gene_chr4_570 TPM= 7.44 Transcript Type= NA
chr4	7396330	7399406	7396330	7399406	+	transcript574.chr4.nnic@SORCS2	transcript574.chr4.nnic	protein_coding	7396330,7399186	7396355,7399406	Gene ID= ENSG00000184985.16 TPM= 2.12 Transcript Type= NA
chr4	7758715	7939926	7758715	7939926	-	ENST00000358461.6@AFAP1	ENST00000358461.6	protein_coding	7939656,7871952,7868622,7855466,7843139,7838524,7819076,7816018,7809614,7800442,7793681,7786194,7778762,7774739,7772820,7768844,7758715	7939926,7872080,7868719,7855574,7843350,7838703,7819171,7816099,7809763,7800653,7793826,7786311,7778876,7774903,7773010,7769008,7763791	Gene ID= ENSG00000196526.10 TPM= 2.12 Transcript Type= protein_coding
chr4	8181985	8241091	8181985	8241091	+	transcript586.chr4.nic@SH3TC1	transcript586.chr4.nic	protein_coding	8181985,8205167,8209748,8212701,8214475,8216111,8216957,8218271,8219335,8222840,8225175,8226980,8231976,8233363,8235433,8236278,8237474,8240698	8182210,8205366,8209822,8212828,8214580,8216257,8217167,8218347,8219449,8222970,8225216,8228644,8232156,8233513,8235555,8236428,8237670,8241091	Gene ID= ENSG00000125089.16 TPM= 4.6 Transcript Type= NA
chr4	8181985	8241091	8181985	8241091	+	transcript587.chr4.nic@SH3TC1	transcript587.chr4.nic	protein_coding	8181985,8205167,8209748,8212701,8214475,8216111,8216957,8218271,8219335,8222840,8225175,8226980,8231976,8233363,8235433,8236278,8237474,8240698	8182210,8205366,8209822,8212828,8214580,8216257,8217167,8218347,8219530,8222970,8225216,8228644,8232156,8233513,8235555,8236428,8237670,8241091	Gene ID= ENSG00000125089.16 TPM= 4.07 Transcript Type= NA
chr4	8199367	8241103	8199367	8241103	+	ENST00000245105.7@SH3TC1	ENST00000245105.7	protein_coding	8199367,8205167,8209748,8212701,8214475,8216111,8216957,8218271,8219335,8222840,8225175,8226980,8231976,8233363,8235433,8236278,8237474,8240698	8199405,8205366,8209822,8212828,8214580,8216257,8217167,8218347,8219530,8222970,8225216,8228644,8232156,8233513,8235555,8236428,8237670,8241103	Gene ID= ENSG00000125089.16 TPM= 4.07 Transcript Type= protein_coding
chr4	8268605	8269641	8268605	8269641	-	transcript604.chr4.nnic@NA	transcript604.chr4.nnic	NA	8268605	8269641	Gene ID= novel_gene_chr4_605 TPM= 2.12 Transcript Type= NA
chr4	8269757	8296474	8269757	8296474	+	transcript598.chr4.nnic@HTRA3	transcript598.chr4.nnic	protein_coding	8269757,8282437,8286561,8291370,8292321,8294087,8295765	8270353,8282536,8286783,8291564,8292353,8294201,8296474	Gene ID= ENSG00000170801.9 TPM= 6.72 Transcript Type= NA
chr4	8269765	8307111	8269765	8307111	+	ENST00000307358.6@HTRA3	ENST00000307358.6	protein_coding	8269765,8282437,8286561,8291370,8292321,8294087,8302463,8304184,8305971	8270353,8282536,8286783,8291564,8292353,8294201,8302511,8304279,8307111	Gene ID= ENSG00000170801.9 TPM= 169.23 Transcript Type= protein_coding
chr4	8269777	8296474	8269777	8296474	+	ENST00000382512.3@HTRA3	ENST00000382512.3	protein_coding	8269777,8282437,8286561,8291370,8292321,8294087,8295695	8270353,8282536,8286783,8291564,8292353,8294201,8296474	Gene ID= ENSG00000170801.9 TPM= 25.84 Transcript Type= protein_coding
chr4	8320117	8323965	8320117	8323965	+	transcript601.chr4.nnic@AC104825.1	transcript601.chr4.nnic	lincRNA	8320117,8322126,8323719	8320522,8322243,8323965	Gene ID= ENSG00000248986.1 TPM= 9.56 Transcript Type= NA
chr4	8320161	8323965	8320161	8323965	+	transcript602.chr4.nic@AC104825.1	transcript602.chr4.nic	lincRNA	8320161,8321957,8323719	8320522,8322243,8323965	Gene ID= ENSG00000248986.1 TPM= 6.37 Transcript Type= NA
chr4	8357294	8360539	8357294	8360539	+	transcript633.chr4.nnic@NA	transcript633.chr4.nnic	NA	8357294	8360539	Gene ID= novel_gene_chr4_634 TPM= 7.44 Transcript Type= NA
chr4	8372125	8383006	8372125	8383006	-	transcript625.chr4.nic@ACOX3	transcript625.chr4.nic	protein_coding	8381492,8374978,8372125	8383006,8375152,8373628	Gene ID= ENSG00000087008.15 TPM= 5.66 Transcript Type= NA
chr4	8374027	8383006	8374027	8383006	-	transcript628.chr4.nic@ACOX3	transcript628.chr4.nic	protein_coding	8381492,8374027	8383006,8375152	Gene ID= ENSG00000087008.15 TPM= 5.66 Transcript Type= NA
chr4	8368859	8370419	8368859	8370419	-	transcript637.chr4.nnic@NA	transcript637.chr4.nnic	NA	8368859	8370419	Gene ID= novel_gene_chr4_638 TPM= 2.12 Transcript Type= NA
chr4	8379650	8383004	8379650	8383004	+	transcript629.chr4.nnic@NA	transcript629.chr4.nnic	NA	8379650	8383004	Gene ID= novel_gene_chr4_630 TPM= 6.72 Transcript Type= NA
chr4	8413948	8415467	8413948	8415467	+	transcript631.chr4.nnic@NA	transcript631.chr4.nnic	NA	8413948	8415467	Gene ID= novel_gene_chr4_632 TPM= 2.12 Transcript Type= NA
chr4	8440823	8476526	8440823	8476526	+	ENST00000389737.4@TRMT44	ENST00000389737.4	protein_coding	8440823,8446476,8449669,8451960,8452882,8454742,8463985,8465378,8467914,8471084,8475772	8441441,8446590,8449888,8452028,8452989,8454813,8464091,8465561,8468346,8471200,8476526	Gene ID= ENSG00000155275.18 TPM= 3.19 Transcript Type= protein_coding
chr4	8489881	8493516	8489881	8493516	+	transcript643.chr4.nnic@NA	transcript643.chr4.nnic	NA	8489881	8493516	Gene ID= novel_gene_chr4_644 TPM= 2.12 Transcript Type= NA
chr4	10075149	10116524	10075149	10116524	-	transcript661.chr4.nic@WDR1	transcript661.chr4.nic	protein_coding	10116331,10116113,10103896,10098992,10097711,10088664,10088293,10087707,10084443,10083022,10081357,10078891,10077753,10077304,10075149	10116524,10116234,10103986,10099139,10097891,10088741,10088373,10087940,10084530,10083178,10081444,10079001,10077926,10077448,10075484	Gene ID= ENSG00000071127.16 TPM= 12.75 Transcript Type= NA
chr4	10074339	10116860	10074339	10116860	-	ENST00000499869.6@WDR1	ENST00000499869.6	protein_coding	10116651,10116113,10103896,10098992,10097711,10088664,10088293,10087707,10084443,10083022,10081357,10078891,10077753,10077304,10074339	10116860,10116234,10103986,10099139,10097891,10088741,10088373,10087940,10084530,10083178,10081444,10079001,10077926,10077448,10075484	Gene ID= ENSG00000071127.16 TPM= 127.46 Transcript Type= protein_coding
chr4	10074340	10116949	10074340	10116949	-	ENST00000382452.6@WDR1	ENST00000382452.6	protein_coding	10116651,10116113,10103896,10098992,10097711,10088664,10088293,10087707,10084441,10083022,10081357,10078891,10077753,10077304,10074340	10116949,10116234,10103986,10099139,10097891,10088741,10088373,10087940,10084530,10083176,10081444,10079001,10077926,10077448,10075484	Gene ID= ENSG00000071127.16 TPM= 27.62 Transcript Type= protein_coding
chr4	10075149	10116727	10075149	10116727	-	ENST00000502702.5@WDR1	ENST00000502702.5	protein_coding	10116651,10116113,10088664,10088293,10087707,10084443,10083022,10081357,10078891,10077753,10077304,10075149	10116727,10116234,10088741,10088373,10087940,10084530,10083178,10081444,10079001,10077926,10077448,10075484	Gene ID= ENSG00000071127.16 TPM= 46.74 Transcript Type= protein_coding
chr4	10439874	10457360	10439874	10457360	-	ENST00000326756.3@ZNF518B	ENST00000326756.3	protein_coding	10457317,10454805,10439874	10457360,10454988,10446539	Gene ID= ENSG00000178163.7 TPM= 3.19 Transcript Type= protein_coding
chr4	10450887	10457410	10450887	10457410	-	ENST00000503068.1@ZNF518B	ENST00000503068.1	protein_coding	10457317,10450887	10457410,10454988	Gene ID= ENSG00000178163.7 TPM= 2.12 Transcript Type= retained_intron
chr4	11393150	11429765	11393150	11429765	-	ENST00000002596.5@HS3ST1	ENST00000002596.5	protein_coding	11428699,11393150	11429765,11400113	Gene ID= ENSG00000002587.9 TPM= 2.12 Transcript Type= protein_coding
chr4	13367724	13484365	13367724	13484365	-	ENST00000288723.8@RAB28	ENST00000288723.8	protein_coding	13484076,13479430,13474318,13460699,13381491,13376545,13369871,13367724	13484365,13479526,13474406,13460828,13381594,13376622,13369965,13368650	Gene ID= ENSG00000157869.14 TPM= 19.12 Transcript Type= protein_coding
chr4	13367724	13484365	13367724	13484365	-	ENST00000330852.9@RAB28	ENST00000330852.9	protein_coding	13484076,13479430,13474318,13460699,13381491,13376545,13367724	13484365,13479526,13474406,13460828,13381594,13376622,13368650	Gene ID= ENSG00000157869.14 TPM= 23.37 Transcript Type= protein_coding
chr4	13375683	13484355	13375683	13484355	-	transcript699.chr4.nnic@RAB28	transcript699.chr4.nnic	protein_coding	13484076,13479430,13474318,13460699,13381491,13376545,13375683	13484355,13479526,13474406,13460828,13381594,13376622,13375752	Gene ID= ENSG00000157869.14 TPM= 9.56 Transcript Type= NA
chr4	13375683	13484355	13375683	13484355	-	transcript701.chr4.nic@RAB28	transcript701.chr4.nic	protein_coding	13484076,13479430,13474318,13460699,13381491,13375683	13484355,13479526,13474406,13460828,13381594,13376622	Gene ID= ENSG00000157869.14 TPM= 14.87 Transcript Type= NA
chr4	13375683	13484355	13375683	13484355	-	transcript703.chr4.nic@RAB28	transcript703.chr4.nic	protein_coding	13484076,13479430,13474318,13381491,13375683	13484355,13479526,13474406,13381594,13376622	Gene ID= ENSG00000157869.14 TPM= 2.12 Transcript Type= NA
chr4	13367724	13484331	13367724	13484331	-	ENST00000508274.5@RAB28	ENST00000508274.5	protein_coding	13484076,13479430,13474318,13381491,13376545,13367724	13484331,13479526,13474406,13381594,13376622,13368650	Gene ID= ENSG00000157869.14 TPM= 1.06 Transcript Type= nonsense_mediated_decay
chr4	13367723	13371336	13367723	13371336	-	transcript704.chr4.nnic@NA	transcript704.chr4.nnic	NA	13367723	13371336	Gene ID= novel_gene_chr4_705 TPM= 2.12 Transcript Type= NA
chr4	13568738	13627723	13568738	13627723	-	ENST00000040738.9@BOD1L1	ENST00000040738.9	protein_coding	13627345,13619943,13615312,13614196,13613512,13610934,13609295,13608530,13607117,13598946,13597104,13595860,13591923,13590386,13588722,13587699,13586396,13582652,13582237,13581132,13581020,13579928,13577582,13577403,13576838,13568738	13627723,13620067,13615502,13614810,13613661,13611100,13609406,13608668,13607189,13605084,13597168,13595944,13591966,13590446,13588792,13587771,13586475,13582736,13582310,13581207,13581054,13579973,13577631,13577487,13576991,13570128	Gene ID= ENSG00000038219.12 TPM= 5.31 Transcript Type= protein_coding
chr4	13608548	13627741	13608548	13627741	-	transcript710.chr4.nic@BOD1L1	transcript710.chr4.nic	protein_coding	13627345,13619943,13615312,13614196,13613512,13610934,13609295,13608548	13627741,13620067,13615502,13614810,13613661,13611100,13609406,13608668	Gene ID= ENSG00000038219.12 TPM= 4.25 Transcript Type= NA
chr4	15002674	15070153	15002674	15070153	+	ENST00000538197.5@CPEB2	ENST00000538197.5	protein_coding	15002674,15007305,15008338,15017188,15033161,15040464,15052414,15054128,15058421,15059187,15062079,15066153	15004335,15007586,15008427,15017278,15033211,15040487,15052584,15054217,15058539,15059301,15062260,15070153	Gene ID= ENSG00000137449.15 TPM= 9.03 Transcript Type= protein_coding
chr4	15002674	15070153	15002674	15070153	+	ENST00000442003.6@CPEB2	ENST00000442003.6	protein_coding	15002674,15007305,15017188,15033161,15040464,15052414,15054128,15058421,15059187,15062079,15066153	15004335,15007595,15017278,15033211,15040487,15052584,15054217,15058539,15059301,15062260,15070153	Gene ID= ENSG00000137449.15 TPM= 3.72 Transcript Type= protein_coding
chr4	15605006	15655382	15605006	15655382	-	ENST00000412094.6@FBXL5	ENST00000412094.6	protein_coding	15655204,15644493,15640788,15638508,15636494,15630666,15627885,15626873,15625252,15612266,15605006	15655382,15644657,15640883,15638694,15636676,15630791,15628033,15626955,15625977,15612414,15605799	Gene ID= ENSG00000118564.14 TPM= 19.12 Transcript Type= protein_coding
chr4	15604539	15655412	15604539	15655412	-	ENST00000341285.7@FBXL5	ENST00000341285.7	protein_coding	15655204,15644493,15640788,15638508,15636494,15630666,15627885,15626873,15625252,15612266,15604539	15655412,15644708,15640883,15638694,15636676,15630791,15628033,15626955,15625977,15612414,15605799	Gene ID= ENSG00000118564.14 TPM= 23.37 Transcript Type= protein_coding
chr4	15681806	15687305	15681806	15687305	+	ENST00000513053.5@FAM200B	ENST00000513053.5	protein_coding	15681806,15686236,15687001	15682021,15686462,15687305	Gene ID= ENSG00000237765.6 TPM= 1.06 Transcript Type= processed_transcript
chr4	15681712	15686603	15681712	15686603	+	transcript755.chr4.nic@FAM200B	transcript755.chr4.nic	protein_coding	15681712,15686236	15681784,15686603	Gene ID= ENSG00000237765.6 TPM= 4.25 Transcript Type= NA
chr4	15681806	15689101	15681806	15689101	+	ENST00000422728.2@FAM200B	ENST00000422728.2	protein_coding	15681806,15686236	15681901,15689101	Gene ID= ENSG00000237765.6 TPM= 1.06 Transcript Type= protein_coding
chr4	15702950	15732173	15702950	15732173	+	ENST00000265016.8@BST1	ENST00000265016.8	protein_coding	15702950,15705515,15707511,15711807,15715285,15715707,15718907,15722875,15731740	15703332,15705641,15707646,15711889,15715361,15715799,15718993,15722934,15732173	Gene ID= ENSG00000109743.10 TPM= 4.25 Transcript Type= protein_coding
chr4	15960243	15963236	15960243	15963236	-	ENST00000259989.6@FGFBP2	ENST00000259989.6	protein_coding	15962438,15960243	15963236,15960611	Gene ID= ENSG00000137441.7 TPM= 3.19 Transcript Type= protein_coding
chr4	15968234	16083701	15968234	16083701	-	ENST00000510224.5@PROM1	ENST00000510224.5	protein_coding	16083665,16075687,16038946,16035735,16033304,16025192,16024295,16023326,16018323,16016166,16013275,16008949,16006538,16000496,15998385,15993987,15992248,15991222,15989732,15987663,15985957,15985760,15984263,15980422,15979881,15979395,15971043,15968234	16083701,16076118,16039001,16035761,16033509,16025312,16024358,16023415,16018540,16016240,16013338,16009108,16006690,16000619,15998488,15994071,15992391,15991293,15989824,15987716,15986037,15985828,15984355,15980537,15979904,15979463,15971082,15969368	Gene ID= ENSG00000007062.11 TPM= 2.12 Transcript Type= protein_coding
chr4	16161291	16226471	16161291	16226471	-	transcript764.chr4.nic@TAPT1	transcript764.chr4.nic	protein_coding	16226259,16213768,16202462,16196658,16191361,16188220,16186781,16186535,16179577,16176119,16174670,16174204,16170653,16166633,16161291	16226471,16213898,16202580,16196723,16191523,16188355,16186878,16186604,16179657,16176228,16174729,16174272,16170729,16166793,16163537	Gene ID= ENSG00000169762.16 TPM= 7.44 Transcript Type= NA
chr4	16256238	16259559	16256238	16259559	-	transcript783.chr4.nnic@NA	transcript783.chr4.nnic	NA	16256238	16259559	Gene ID= novel_gene_chr4_784 TPM= 5.31 Transcript Type= NA
chr4	16501541	16898584	16501541	16898584	-	transcript786.chr4.nnic@LDB2	transcript786.chr4.nnic	protein_coding	16898354,16759158,16595703,16588710,16585922,16511981,16508541,16505840,16501541	16898584,16759260,16595875,16588832,16586005,16512104,16508686,16505982,16502873	Gene ID= ENSG00000169744.12 TPM= 2.92 Transcript Type= NA
chr4	16501541	16898809	16501541	16898809	-	ENST00000304523.9@LDB2	ENST00000304523.9	protein_coding	16898354,16759158,16595703,16588710,16585922,16511981,16508535,16501541	16898809,16759260,16595875,16588832,16586005,16512104,16508686,16502873	Gene ID= ENSG00000169744.12 TPM= 2.92 Transcript Type= protein_coding
chr4	16501541	16898594	16501541	16898594	-	ENST00000441778.6@LDB2	ENST00000441778.6	protein_coding	16898354,16759158,16595703,16588710,16585922,16511981,16508535,16505840,16501541	16898594,16759260,16595875,16588832,16586005,16512104,16508686,16505982,16502873	Gene ID= ENSG00000169744.12 TPM= 8.23 Transcript Type= protein_coding
chr4	16501541	16898562	16501541	16898562	-	ENST00000515064.5@LDB2	ENST00000515064.5	protein_coding	16898354,16759158,16595703,16588710,16585922,16511981,16508541,16501541	16898562,16759260,16595875,16588832,16586005,16512104,16508686,16502873	Gene ID= ENSG00000169744.12 TPM= 3.98 Transcript Type= protein_coding
chr4	16750009	16754260	16750009	16754260	-	transcript800.chr4.nnic@NA	transcript800.chr4.nnic	NA	16750009	16754260	Gene ID= novel_gene_chr4_801 TPM= 2.12 Transcript Type= NA
chr4	16875178	16875477	16875178	16875477	+	transcript794.chr4.nnic@NA	transcript794.chr4.nnic	NA	16875178	16875477	Gene ID= novel_gene_chr4_795 TPM= 2.12 Transcript Type= NA
chr4	16890358	16891226	16890358	16891226	+	transcript796.chr4.nnic@NA	transcript796.chr4.nnic	NA	16890358	16891226	Gene ID= novel_gene_chr4_797 TPM= 2.12 Transcript Type= NA
chr4	16894620	16895135	16894620	16895135	+	transcript798.chr4.nnic@NA	transcript798.chr4.nnic	NA	16894620	16895135	Gene ID= novel_gene_chr4_799 TPM= 6.37 Transcript Type= NA
chr4	17486398	17512234	17486398	17512234	-	ENST00000281243.9@QDPR	ENST00000281243.9	protein_coding	17511950,17509271,17504379,17501719,17492232,17490662,17486398	17512234,17509363,17504475,17501859,17492340,17490745,17487236	Gene ID= ENSG00000151552.11 TPM= 61.07 Transcript Type= protein_coding
chr4	17486527	17512086	17486527	17512086	-	ENST00000428702.6@QDPR	ENST00000428702.6	protein_coding	17511950,17504379,17501719,17492232,17490662,17486527	17512086,17504475,17501859,17492340,17490745,17487236	Gene ID= ENSG00000151552.11 TPM= 1.06 Transcript Type= protein_coding
chr4	17486398	17512069	17486398	17512069	-	ENST00000507439.5@QDPR	ENST00000507439.5	protein_coding	17511950,17509271,17504379,17501719,17490662,17486398	17512069,17509363,17504475,17501859,17490745,17487236	Gene ID= ENSG00000151552.11 TPM= 3.72 Transcript Type= nonsense_mediated_decay
chr4	17577192	17607968	17577192	17607968	+	ENST00000226299.8@LAP3	ENST00000226299.8	protein_coding	17577192,17579824,17581760,17582288,17583483,17584972,17588819,17595410,17597046,17598456,17604588,17606829,17607400	17577567,17579939,17581814,17582393,17583642,17585136,17588977,17595534,17597134,17598558,17604667,17606938,17607968	Gene ID= ENSG00000002549.12 TPM= 155.08 Transcript Type= protein_coding
chr4	17614631	17634105	17614631	17634105	+	ENST00000237380.11@MED28	ENST00000237380.11	protein_coding	17614631,17619901,17621587,17623601	17614813,17619967,17621699,17634105	Gene ID= ENSG00000118579.12 TPM= 10.62 Transcript Type= protein_coding
chr4	17800655	17810758	17800655	17810758	-	ENST00000382247.5@DCAF16	ENST00000382247.5	protein_coding	17810447,17805107,17800655	17810758,17805225,17804771	Gene ID= ENSG00000163257.10 TPM= 2.12 Transcript Type= protein_coding
chr4	17809425	17810711	17809425	17810711	-	ENST00000507731.1@DCAF16	ENST00000507731.1	protein_coding	17810447,17809425	17810711,17809692	Gene ID= ENSG00000163257.10 TPM= 1.06 Transcript Type= processed_transcript
chr4	20251904	20282707	20251904	20282707	+	transcript843.chr4.nnic@SLIT2	transcript843.chr4.nnic	protein_coding	20251904,20256672,20257868,20268810,20281429	20253994,20256743,20257939,20268881,20282707	Gene ID= ENSG00000145147.19 TPM= 3.19 Transcript Type= NA
chr4	20700413	20728357	20700413	20728357	+	ENST00000360916.9@PACRGL	ENST00000360916.9	protein_coding	20700413,20704466,20704660,20707803,20709683,20712788,20713432,20727285	20700787,20704533,20704814,20707870,20709773,20712922,20713539,20728357	Gene ID= ENSG00000163138.18 TPM= 1.06 Transcript Type= protein_coding
chr4	22397860	22516097	22397860	22516097	-	transcript852.chr4.nnic@ADGRA3	transcript852.chr4.nnic	protein_coding	22515528,22473772,22461737,22454866,22447440,22444973,22442650,22438256,22436440,22435311,22424191,22420886,22413601,22413182,22402675,22401431,22397860	22516097,22473843,22461808,22454937,22447511,22445133,22442863,22438420,22436641,22435466,22424352,22421089,22413814,22413390,22402799,22401554,22398138	Gene ID= ENSG00000152990.13 TPM= 4.25 Transcript Type= NA
chr4	22400682	22516097	22400682	22516097	-	transcript854.chr4.nic@ADGRA3	transcript854.chr4.nic	protein_coding	22515528,22473772,22461737,22454866,22447440,22444973,22442650,22438256,22436440,22435311,22424191,22420886,22413601,22413182,22402675,22400682	22516097,22473843,22461808,22454937,22447511,22445133,22442863,22438420,22436641,22435466,22424352,22421089,22413814,22413390,22402799,22401554	Gene ID= ENSG00000152990.13 TPM= 3.19 Transcript Type= NA
chr4	22387375	22516054	22387375	22516054	-	ENST00000334304.9@ADGRA3	ENST00000334304.9	protein_coding	22515528,22473772,22461737,22454866,22447440,22444973,22442650,22438256,22436440,22435311,22424191,22420886,22413601,22413182,22402675,22401431,22392545,22389088,22387375	22516054,22473843,22461808,22454937,22447511,22445133,22442863,22438420,22436641,22435466,22424352,22421089,22413814,22413390,22402799,22401554,22392690,22389183,22388947	Gene ID= ENSG00000152990.13 TPM= 18.06 Transcript Type= protein_coding
chr4	22516021	22516946	22516021	22516946	+	transcript859.chr4.nnic@NA	transcript859.chr4.nnic	NA	22516021	22516946	Gene ID= novel_gene_chr4_860 TPM= 2.12 Transcript Type= NA
chr4	23792021	23890077	23792021	23890077	-	ENST00000264867.6@PPARGC1A	ENST00000264867.6	protein_coding	23889904,23884752,23831557,23829463,23828400,23824463,23824280,23813690,23813021,23812747,23802224,23801730,23792021	23890077,23884931,23831751,23829585,23828604,23824508,23824353,23814605,23813125,23812867,23802345,23801881,23795925	Gene ID= ENSG00000109819.8 TPM= 36.11 Transcript Type= protein_coding
chr4	24465058	24466898	24465058	24466898	+	transcript876.chr4.nnic@NA	transcript876.chr4.nnic	NA	24465058	24466898	Gene ID= novel_gene_chr4_877 TPM= 3.19 Transcript Type= NA
chr4	24527475	24584255	24527475	24584255	-	transcript879.chr4.nnic@DHX15	transcript879.chr4.nnic	protein_coding	24584184,24576243,24570654,24556251,24554725,24548855,24542940,24541873,24540840,24540108,24537051,24532864,24529601,24527475	24584255,24576678,24570847,24556410,24554943,24549022,24543026,24542022,24540948,24540299,24537173,24533054,24529770,24528041	Gene ID= ENSG00000109606.12 TPM= 2.66 Transcript Type= NA
chr4	24539851	24584576	24539851	24584576	-	transcript883.chr4.nic@DHX15	transcript883.chr4.nic	protein_coding	24584323,24576243,24570654,24556251,24554725,24548855,24542940,24541873,24540840,24539851	24584576,24576678,24570847,24556410,24554943,24549022,24543026,24542022,24540948,24540299	Gene ID= ENSG00000109606.12 TPM= 3.19 Transcript Type= NA
chr4	24527475	24584550	24527475	24584550	-	ENST00000336812.4@DHX15	ENST00000336812.4	protein_coding	24584323,24576243,24570654,24556251,24554725,24548855,24542940,24541873,24540840,24540108,24537051,24532864,24529601,24527475	24584550,24576678,24570847,24556410,24554943,24549022,24543026,24542022,24540948,24540299,24537173,24533054,24529770,24528041	Gene ID= ENSG00000109606.12 TPM= 58.95 Transcript Type= protein_coding
chr4	24795566	24800842	24795566	24800842	+	transcript887.chr4.nnic@SOD3	transcript887.chr4.nnic	protein_coding	24795566,24799506,24800619	24795651,24800528,24800842	Gene ID= ENSG00000109610.5 TPM= 30.27 Transcript Type= NA
chr4	24795463	24800842	24795463	24800842	+	ENST00000382120.3@SOD3	ENST00000382120.3	protein_coding	24795463,24799506	24795651,24800842	Gene ID= ENSG00000109610.5 TPM= 182.16 Transcript Type= protein_coding
chr4	24796624	24798517	24796624	24798517	-	transcript890.chr4.nnic@NA	transcript890.chr4.nnic	NA	24796624	24798517	Gene ID= novel_gene_chr4_891 TPM= 14.87 Transcript Type= NA
chr4	24851272	24913039	24851272	24913039	-	transcript899.chr4.nic@CCDC149	transcript899.chr4.nic	protein_coding	24912817,24876536,24873681,24851272	24913039,24876697,24873719,24853179	Gene ID= ENSG00000181982.18 TPM= 3.19 Transcript Type= NA
chr4	24806117	24912886	24806117	24912886	-	ENST00000504487.5@CCDC149	ENST00000504487.5	protein_coding	24912817,24876536,24873681,24853072,24838156,24837228,24836436,24834948,24831506,24822497,24819859,24806117	24912886,24876697,24873719,24853179,24838272,24837400,24836508,24835032,24831650,24822573,24819975,24808819	Gene ID= ENSG00000181982.18 TPM= 1.06 Transcript Type= protein_coding
chr4	25120014	25160442	25120014	25160442	-	ENST00000382103.6@SEPSECS	ENST00000382103.6	protein_coding	25160256,25158953,25156856,25156037,25154998,25151960,25145004,25144774,25127264,25125694,25120014	25160442,25159107,25156974,25156195,25155151,25152062,25145133,25144865,25127357,25125784,25124225	Gene ID= ENSG00000109618.11 TPM= 1.06 Transcript Type= protein_coding
chr4	25160641	25161687	25160641	25161687	+	ENST00000510415.1@AC104662.3	ENST00000510415.1	antisense_RNA	25160641,25161418	25160753,25161687	Gene ID= ENSG00000281501.1 TPM= 4.25 Transcript Type= antisense_RNA
chr4	25233975	25279092	25233975	25279092	+	ENST00000264864.7@PI4K2B	ENST00000264864.7	protein_coding	25233975,25252321,25255065,25256543,25259037,25260524,25263750,25268443,25269144,25277014	25234431,25252475,25255265,25256674,25259190,25260591,25263849,25268576,25269203,25279092	Gene ID= ENSG00000038210.12 TPM= 3.19 Transcript Type= protein_coding
chr4	25377213	25418498	25377213	25418498	+	ENST00000315368.7@ANAPC4	ENST00000315368.7	protein_coding	25377213,25377418,25380374,25383261,25388500,25388717,25388838,25390136,25390911,25392338,25393805,25394310,25394671,25394829,25396664,25396848,25402971,25405573,25406829,25407197,25409698,25413645,25414324,25414466,25414599,25415466,25416425,25417616,25418155	25377344,25377556,25380479,25383393,25388574,25388743,25388882,25390220,25391015,25392421,25393891,25394374,25394713,25394905,25396764,25396899,25403026,25405619,25406885,25407253,25409791,25413742,25414385,25414504,25414700,25415540,25416598,25417739,25418498	Gene ID= ENSG00000053900.10 TPM= 15.93 Transcript Type= protein_coding
chr4	25377211	25418489	25377211	25418489	+	transcript927.chr4.nnic@ANAPC4	transcript927.chr4.nnic	protein_coding	25377211,25377418,25380374,25383261,25388500,25388717,25388838,25390136,25390911,25392338,25394310,25394671,25394829,25396664,25396848,25402971,25405573,25406829,25407197,25409698,25413645,25414324,25414466,25414599,25415466,25416425,25417616,25418155	25377344,25377556,25380479,25383393,25388574,25388743,25388882,25390220,25391015,25392421,25394374,25394713,25394905,25396764,25396899,25403026,25405619,25406885,25407253,25409791,25413742,25414385,25414504,25414700,25415540,25416598,25417739,25418489	Gene ID= ENSG00000053900.10 TPM= 10.62 Transcript Type= NA
chr4	25747427	25862959	25747427	25862959	-	ENST00000399878.7@SEL1L3	ENST00000399878.7	protein_coding	25862675,25847294,25835197,25833448,25832995,25830098,25821996,25819808,25818138,25804541,25802283,25790455,25788224,25784228,25782242,25779076,25776277,25767740,25767525,25765326,25758941,25757688,25757534,25747427	25862959,25847864,25835323,25833569,25833110,25830156,25822128,25819940,25818278,25804752,25802462,25790574,25788364,25784290,25782418,25779203,25776360,25767830,25767609,25765435,25759068,25757790,25757606,25748564	Gene ID= ENSG00000091490.10 TPM= 3.19 Transcript Type= protein_coding
chr4	25914204	25929812	25914204	25929812	+	ENST00000506197.2@SMIM20	ENST00000506197.2	protein_coding	25914204,25928313,25929154	25914422,25928369,25929812	Gene ID= ENSG00000250317.8 TPM= 66.92 Transcript Type= protein_coding
chr4	26320807	26435128	26320807	26435128	+	ENST00000355476.7@RBPJ	ENST00000355476.7	protein_coding	26320807,26362446,26386353,26406175,26415475,26420551,26424342,26424631,26428720,26429898,26430419,26430692	26321048,26362628,26386391,26406270,26415640,26420725,26424479,26424743,26428860,26430053,26430522,26435128	Gene ID= ENSG00000168214.20 TPM= 4.25 Transcript Type= protein_coding
chr4	26320800	26431066	26320800	26431066	+	ENST00000348160.8@RBPJ	ENST00000348160.8	protein_coding	26320800,26386353,26406175,26415475,26420551,26424342,26424631,26428720,26429898,26430419,26430692	26321048,26386391,26406270,26415640,26420725,26424479,26424743,26428860,26430053,26430522,26431066	Gene ID= ENSG00000168214.20 TPM= 2.12 Transcript Type= protein_coding
chr4	26320807	26431183	26320807	26431183	+	transcript944.chr4.nic@RBPJ	transcript944.chr4.nic	protein_coding	26320807,26386353,26406175,26415475,26420551,26424342,26424631,26428720,26429898,26430692	26321048,26386391,26406270,26415640,26420725,26424479,26424743,26428860,26430522,26431183	Gene ID= ENSG00000168214.20 TPM= 2.12 Transcript Type= NA
chr4	26320807	26406265	26320807	26406265	+	ENST00000509158.5@RBPJ	ENST00000509158.5	protein_coding	26320807,26362446,26386353,26406175	26321048,26362628,26386391,26406265	Gene ID= ENSG00000168214.20 TPM= 3.19 Transcript Type= protein_coding
chr4	26583916	26755351	26583916	26755351	+	ENST00000264866.8@TBC1D19	ENST00000264866.8	protein_coding	26583916,26613169,26614408,26620613,26637211,26638771,26640141,26659597,26666333,26672149,26673776,26683675,26688345,26717933,26720081,26735455,26739864,26742508,26748411,26753820,26754873	26584292,26613241,26614453,26620688,26637285,26638834,26640187,26659707,26666405,26672187,26673888,26683749,26688407,26718017,26720125,26735487,26739973,26742599,26748526,26753890,26755351	Gene ID= ENSG00000109680.10 TPM= 5.31 Transcript Type= protein_coding
chr4	26859806	26860581	26859806	26860581	-	ENST00000489096.5@AC106047.1	ENST00000489096.5	antisense_RNA	26860510,26859806	26860581,26860028	Gene ID= ENSG00000240005.5 TPM= 1.06 Transcript Type= antisense_RNA
chr4	26859806	26860599	26859806	26860599	-	ENST00000467484.1@AC106047.1	ENST00000467484.1	antisense_RNA	26860341,26859806	26860599,26860028	Gene ID= ENSG00000240005.5 TPM= 1.06 Transcript Type= antisense_RNA
chr4	26860691	27025381	26860691	27025381	+	ENST00000467087.5@STIM2	ENST00000467087.5	protein_coding	26860691,26919504,26957612,26995379,26999232,27002217,27002927,27007533,27008428,27008764,27017711,27022519	26861369,26919634,26957726,26995490,26999347,27002394,27003104,27007700,27008528,27009002,27017984,27025381	Gene ID= ENSG00000109689.15 TPM= 18.06 Transcript Type= protein_coding
chr4	30720333	30724227	30720333	30724227	+	transcript970.chr4.nnic@NA	transcript970.chr4.nnic	NA	30720333	30724227	Gene ID= novel_gene_chr4_971 TPM= 13.81 Transcript Type= NA
chr4	30765127	30767476	30765127	30767476	-	transcript980.chr4.nnic@NA	transcript980.chr4.nnic	NA	30765127	30767476	Gene ID= novel_gene_chr4_981 TPM= 12.75 Transcript Type= NA
chr4	30846487	30850336	30846487	30850336	-	transcript982.chr4.nnic@NA	transcript982.chr4.nnic	NA	30846487	30850336	Gene ID= novel_gene_chr4_983 TPM= 2.12 Transcript Type= NA
chr4	30943726	30946654	30943726	30946654	-	transcript984.chr4.nnic@NA	transcript984.chr4.nnic	NA	30943726	30946654	Gene ID= novel_gene_chr4_985 TPM= 2.12 Transcript Type= NA
chr4	31085855	31089722	31085855	31089722	-	transcript978.chr4.nnic@NA	transcript978.chr4.nnic	NA	31085855	31089722	Gene ID= novel_gene_chr4_979 TPM= 4.25 Transcript Type= NA
chr4	31142631	31145459	31142631	31145459	+	transcript974.chr4.nnic@NA	transcript974.chr4.nnic	NA	31142631	31145459	Gene ID= novel_gene_chr4_975 TPM= 4.25 Transcript Type= NA
chr4	37611902	37612199	37611902	37612199	+	transcript991.chr4.nnic@NA	transcript991.chr4.nnic	NA	37611902	37612199	Gene ID= novel_gene_chr4_992 TPM= 31.86 Transcript Type= NA
chr4	37826633	37862937	37826633	37862937	+	ENST00000381967.8@PGM2	ENST00000381967.8	protein_coding	37826633,37829964,37834618,37837529,37839848,37840066,37844364,37845633,37846931,37847202,37848522,37850184,37855608,37861510	37826813,37830131,37834724,37837613,37839931,37840259,37844553,37845730,37847111,37847295,37848651,37850373,37855741,37862937	Gene ID= ENSG00000169299.13 TPM= 6.37 Transcript Type= protein_coding
chr4	37891087	38137619	37891087	38137619	+	transcript998.chr4.nic@TBC1D1	transcript998.chr4.nic	protein_coding	37891087,37902003,38014509,38018354,38020591,38021586,38027788,38035588,38044362,38045817,38049618,38051899,38053106,38054199,38089932,38095929,38102999,38115710,38118033,38124962,38133084,38137135	37891348,37902512,38014973,38018443,38020695,38021718,38027879,38035698,38044490,38045903,38049898,38052060,38053225,38054338,38090117,38096090,38103157,38115954,38118192,38125131,38133257,38137619	Gene ID= ENSG00000065882.15 TPM= 19.12 Transcript Type= NA
chr4	37977292	38137619	37977292	38137619	+	transcript1007.chr4.nic@TBC1D1	transcript1007.chr4.nic	protein_coding	37977292,38014509,38018354,38020591,38021586,38027788,38035588,38044362,38045817,38049618,38051899,38053106,38054199,38089932,38095929,38102999,38115710,38118033,38124962,38133084,38137135	37977529,38014973,38018443,38020695,38021718,38027879,38035698,38044490,38045903,38049898,38052060,38053225,38054338,38090117,38096090,38103157,38115954,38118192,38125131,38133257,38137619	Gene ID= ENSG00000065882.15 TPM= 32.4 Transcript Type= NA
chr4	37977358	38137619	37977358	38137619	+	transcript1011.chr4.nic@TBC1D1	transcript1011.chr4.nic	protein_coding	37977358,38014509,38018354,38020591,38021586,38027788,38035588,38044362,38045817,38049618,38053106,38054199,38089932,38095929,38102999,38115710,38118033,38124962,38133084,38137135	37977529,38014973,38018443,38020695,38021718,38027879,38035698,38044490,38045903,38049898,38053225,38054338,38090117,38096090,38103157,38115954,38118192,38125131,38133257,38137619	Gene ID= ENSG00000065882.15 TPM= 16.99 Transcript Type= NA
chr4	37977292	38137619	37977292	38137619	+	transcript1016.chr4.nic@TBC1D1	transcript1016.chr4.nic	protein_coding	37977292,38014509,38018354,38020591,38021586,38027788,38035588,38044362,38045817,38049618,38054199,38089932,38095929,38102999,38115710,38118033,38124962,38133084,38137135	37977529,38014973,38018443,38020695,38021718,38027879,38035698,38044490,38045903,38049898,38054338,38090117,38096090,38103157,38115954,38118192,38125131,38133257,38137619	Gene ID= ENSG00000065882.15 TPM= 15.93 Transcript Type= NA
chr4	37891099	37952812	37891099	37952812	+	ENST00000402522.1@TBC1D1	ENST00000402522.1	protein_coding	37891099,37902003,37952006	37891348,37902512,37952812	Gene ID= ENSG00000065882.15 TPM= 2.66 Transcript Type= protein_coding
chr4	37977310	38090065	37977310	38090065	+	ENST00000446803.6@TBC1D1	ENST00000446803.6	protein_coding	37977310,38014509,38018354,38020591,38021586,38027788,38035588,38044362,38045817,38049618,38054199,38089932	37977529,38014973,38018443,38020695,38021718,38027879,38035698,38044490,38045903,38049898,38054338,38090065	Gene ID= ENSG00000065882.15 TPM= 3.19 Transcript Type= protein_coding
chr4	37911133	37914631	37911133	37914631	-	transcript1030.chr4.nnic@NA	transcript1030.chr4.nnic	NA	37911133	37914631	Gene ID= novel_gene_chr4_1031 TPM= 16.99 Transcript Type= NA
chr4	38048543	38051870	38048543	38051870	-	transcript1034.chr4.nnic@NA	transcript1034.chr4.nnic	NA	38048543	38051870	Gene ID= novel_gene_chr4_1035 TPM= 3.19 Transcript Type= NA
chr4	38066267	38069347	38066267	38069347	-	transcript1032.chr4.nnic@NA	transcript1032.chr4.nnic	NA	38066267	38069347	Gene ID= novel_gene_chr4_1033 TPM= 3.19 Transcript Type= NA
chr4	38662509	38663756	38662509	38663756	-	transcript1042.chr4.nnic@NA	transcript1042.chr4.nnic	NA	38662509	38663756	Gene ID= novel_gene_chr4_1043 TPM= 3.19 Transcript Type= NA
chr4	38867711	38944938	38867711	38944938	+	transcript1047.chr4.nic@FAM114A1	transcript1047.chr4.nic	protein_coding	38867711,38878071,38891743,38905522,38905755,38908592,38914921,38922770,38929242,38931451,38932235,38935718,38940968,38943456	38867834,38878426,38891830,38905635,38905861,38908726,38915073,38922893,38929333,38931612,38932374,38935790,38941021,38944938	Gene ID= ENSG00000197712.11 TPM= 16.99 Transcript Type= NA
chr4	38867770	38931522	38867770	38931522	+	transcript1050.chr4.nic@FAM114A1	transcript1050.chr4.nic	protein_coding	38867770,38868398,38878071,38891743,38905522,38905755,38908592,38914921,38922770,38929242,38931451	38867834,38868546,38878426,38891830,38905635,38905861,38908726,38915073,38922893,38929333,38931522	Gene ID= ENSG00000197712.11 TPM= 2.12 Transcript Type= NA
chr4	39270053	39285809	39270053	39285809	+	ENST00000512534.5@WDR19	ENST00000512534.5	protein_coding	39270053,39272980,39277020,39278131,39278539,39285487	39270100,39274958,39277143,39278207,39278663,39285809	Gene ID= ENSG00000157796.17 TPM= 3.19 Transcript Type= retained_intron
chr4	39320460	39366389	39320460	39366389	-	transcript1077.chr4.nic@RFC1	transcript1077.chr4.nic	protein_coding	39366239,39351348,39345401,39342345,39327524,39326563,39323340,39321287,39320460	39366389,39351476,39345476,39342467,39327756,39326640,39323417,39321374,39320669	Gene ID= ENSG00000035928.15 TPM= 10.62 Transcript Type= NA
chr4	39287456	39366375	39287456	39366375	-	ENST00000381897.5@RFC1	ENST00000381897.5	protein_coding	39366239,39351348,39345401,39342345,39327524,39326563,39323340,39321287,39320383,39316915,39312752,39311445,39308636,39306592,39304814,39303060,39302737,39302500,39302278,39300260,39300021,39295614,39291639,39289848,39287456	39366375,39351476,39345476,39342467,39327756,39326640,39323417,39321374,39320669,39317022,39312931,39311549,39309032,39306704,39304928,39303151,39302874,39302595,39302376,39300414,39300138,39295759,39291852,39290039,39288844	Gene ID= ENSG00000035928.15 TPM= 8.5 Transcript Type= protein_coding
chr4	39454124	39458948	39454124	39458948	-	ENST00000295955.13@RPL9	ENST00000295955.13	protein_coding	39458891,39458394,39458194,39457586,39456406,39454864,39454533,39454124	39458948,39458440,39458309,39457681,39456538,39454944,39454649,39454225	Gene ID= ENSG00000163682.15 TPM= 170.66 Transcript Type= protein_coding
chr4	39454139	39458925	39454139	39458925	-	transcript1083.chr4.nic@RPL9	transcript1083.chr4.nic	protein_coding	39458891,39458394,39458194,39457586,39456406,39454864,39454533,39454139	39458925,39458598,39458309,39457681,39456538,39454944,39454649,39454225	Gene ID= ENSG00000163682.15 TPM= 12.93 Transcript Type= NA
chr4	39454137	39458888	39454137	39458888	-	ENST00000449470.6@RPL9	ENST00000449470.6	protein_coding	39458394,39458194,39457586,39456406,39454864,39454533,39454137	39458888,39458309,39457681,39456538,39454944,39454649,39454225	Gene ID= ENSG00000163682.15 TPM= 32.05 Transcript Type= protein_coding
chr4	39455700	39457365	39455700	39457365	+	transcript1085.chr4.nnic@NA	transcript1085.chr4.nnic	NA	39455700	39457365	Gene ID= novel_gene_chr4_1086 TPM= 2.12 Transcript Type= NA
chr4	39458587	39479506	39458587	39479506	+	ENST00000640888.1@LIAS	ENST00000640888.1	protein_coding	39458587,39460790,39462196,39463525,39465046,39465285,39467518,39470019,39471236,39473100,39477063	39459162,39460962,39462289,39463605,39465202,39465342,39467646,39470164,39471306,39473211,39479506	Gene ID= ENSG00000121897.14 TPM= 6.37 Transcript Type= protein_coding
chr4	39498755	39527618	39498755	39527618	-	ENST00000316423.10@UGDH	ENST00000316423.10	protein_coding	39527283,39521351,39514083,39510661,39510353,39509760,39508566,39505618,39505237,39504417,39503875,39498755	39527618,39521519,39514184,39510861,39510550,39509907,39508660,39505748,39505370,39504508,39503985,39500253	Gene ID= ENSG00000109814.11 TPM= 12.75 Transcript Type= protein_coding
chr4	39527734	39532526	39527734	39532526	+	transcript1104.chr4.nic@UGDH-AS1	transcript1104.chr4.nic	antisense_RNA	39527734,39531969	39528338,39532526	Gene ID= ENSG00000249348.1 TPM= 4.25 Transcript Type= NA
chr4	39527734	39533501	39527734	39533501	+	transcript1105.chr4.nic@UGDH-AS1	transcript1105.chr4.nic	antisense_RNA	39527734,39531969	39528338,39533501	Gene ID= ENSG00000249348.1 TPM= 3.19 Transcript Type= NA
chr4	39546330	39639090	39546330	39639090	-	ENST00000295958.9@SMIM14	ENST00000295958.9	protein_coding	39638739,39605071,39572415,39556428,39546330	39639090,39605180,39572463,39556570,39552158	Gene ID= ENSG00000163683.11 TPM= 20.18 Transcript Type= protein_coding
chr4	39639140	39653397	39639140	39653397	+	ENST00000529094.5@AC108471.2	ENST00000529094.5	lincRNA	39639140,39641694,39650377,39651266,39653373	39639294,39641792,39650454,39651406,39653397	Gene ID= ENSG00000255458.5 TPM= 2.12 Transcript Type= lincRNA
chr4	39698044	39782792	39698044	39782792	+	ENST00000261427.9@UBE2K	ENST00000261427.9	protein_coding	39698044,39737420,39745752,39755657,39774834,39777682,39778360	39698390,39737513,39745810,39755739,39774933,39777810,39782792	Gene ID= ENSG00000078140.13 TPM= 32.93 Transcript Type= protein_coding
chr4	39698139	39779992	39698139	39779992	+	ENST00000438068.6@UBE2K	ENST00000438068.6	protein_coding	39698139,39737420,39745752,39755657,39774834,39777682,39778360	39698302,39737513,39745810,39755739,39774933,39777810,39779992	Gene ID= ENSG00000078140.13 TPM= 2.12 Transcript Type= processed_transcript
chr4	39698163	39778710	39698163	39778710	+	ENST00000503368.5@UBE2K	ENST00000503368.5	protein_coding	39698163,39755657,39774834,39777682,39778360	39698390,39755739,39774933,39777810,39778710	Gene ID= ENSG00000078140.13 TPM= 1.06 Transcript Type= protein_coding
chr4	39733334	39735609	39733334	39735609	-	transcript1125.chr4.nnic@NA	transcript1125.chr4.nnic	NA	39733334	39735609	Gene ID= novel_gene_chr4_1126 TPM= 2.12 Transcript Type= NA
chr4	39822863	39977956	39822863	39977956	-	ENST00000303538.12@PDS5A	ENST00000303538.12	protein_coding	39977457,39976440,39927961,39926775,39925836,39922622,39920319,39917048,39913611,39910244,39908395,39904040,39902347,39900426,39898777,39898389,39890249,39879728,39876993,39874289,39872986,39869394,39866861,39863336,39862869,39862219,39849520,39848851,39845818,39844656,39841948,39837856,39822863	39977956,39976617,39928164,39926861,39925933,39922748,39920399,39917188,39913726,39910338,39908540,39904191,39902460,39900507,39898825,39898528,39890364,39879833,39877153,39874412,39873144,39869462,39866997,39863459,39863073,39862333,39849652,39848970,39845880,39844801,39842056,39838208,39825488	Gene ID= ENSG00000121892.14 TPM= 5.66 Transcript Type= protein_coding
chr4	39898014	39977956	39898014	39977956	-	ENST00000503396.5@PDS5A	ENST00000503396.5	protein_coding	39977457,39976440,39927961,39926775,39925836,39922622,39920319,39917048,39913611,39910244,39908395,39904040,39902347,39900426,39898777,39898014	39977956,39976617,39928164,39926861,39925933,39922748,39920399,39917188,39913726,39910338,39908540,39904191,39902460,39900507,39898825,39898528	Gene ID= ENSG00000121892.14 TPM= 15.22 Transcript Type= protein_coding
chr4	39908196	39977637	39908196	39977637	-	transcript1139.chr4.nic@PDS5A	transcript1139.chr4.nic	protein_coding	39977457,39976440,39927961,39926775,39925836,39922622,39920319,39917048,39913611,39910244,39908196	39977637,39976617,39928164,39926861,39925933,39922748,39920399,39917188,39913726,39910338,39908540	Gene ID= ENSG00000121892.14 TPM= 2.47 Transcript Type= NA
chr4	39918615	39923340	39918615	39923340	+	transcript1145.chr4.nnic@NA	transcript1145.chr4.nnic	NA	39918615	39923340	Gene ID= novel_gene_chr4_1146 TPM= 2.12 Transcript Type= NA
chr4	40056806	40120092	40056806	40120092	+	transcript1150.chr4.nic@N4BP2	transcript1150.chr4.nic	protein_coding	40056806,40073455,40102075,40106900,40112084,40113432,40117869,40119932	40057030,40073551,40103218,40107024,40112172,40113508,40118024,40120092	Gene ID= ENSG00000078177.13 TPM= 3.19 Transcript Type= NA
chr4	40810027	41214618	40810027	41214618	-	ENST00000295974.12@APBB2	ENST00000295974.12	protein_coding	41214405,41142987,41100639,41065576,41033236,41013583,40944865,40935077,40934614,40934456,40893265,40890364,40830463,40827132,40825887,40823644,40821871,40810027	41214618,41143142,41100750,41065673,41033304,41014398,40945070,40935139,40934699,40934516,40893411,40890491,40830577,40827219,40825970,40823759,40822050,40816259	Gene ID= ENSG00000163697.16 TPM= 1.06 Transcript Type= protein_coding
chr4	40810028	40857155	40810028	40857155	-	ENST00000543538.5@APBB2	ENST00000543538.5	protein_coding	40856985,40830463,40827132,40825887,40823644,40821871,40810028	40857155,40830583,40827219,40825970,40823759,40822050,40816259	Gene ID= ENSG00000163697.16 TPM= 1.06 Transcript Type= protein_coding
chr4	40812783	40842509	40812783	40842509	-	transcript1156.chr4.nic@APBB2	transcript1156.chr4.nic	protein_coding	40842370,40830463,40827132,40825887,40823644,40821871,40812783	40842509,40830577,40827219,40825970,40823759,40822050,40816259	Gene ID= ENSG00000163697.16 TPM= 3.19 Transcript Type= NA
chr4	41048774	41050142	41048774	41050142	+	transcript1169.chr4.nnic@NA	transcript1169.chr4.nnic	NA	41048774	41050142	Gene ID= novel_gene_chr4_1170 TPM= 3.19 Transcript Type= NA
chr4	41256833	41268429	41256833	41268429	+	ENST00000284440.8@UCHL1	ENST00000284440.8	protein_coding	41256833,41257115,41257609,41260647,41261715,41261876,41263225,41264103,41267987	41257009,41257126,41257737,41260797,41261800,41261923,41263291,41264161,41268429	Gene ID= ENSG00000154277.12 TPM= 44.61 Transcript Type= protein_coding
chr4	41256908	41268428	41256908	41268428	+	ENST00000381760.8@UCHL1	ENST00000381760.8	protein_coding	41256908,41257115,41260647,41261715,41261876,41263225,41264103,41267987	41257009,41257737,41260797,41261800,41261923,41263291,41264161,41268428	Gene ID= ENSG00000154277.12 TPM= 13.81 Transcript Type= retained_intron
chr4	41538150	41699000	41538150	41699000	+	transcript1196.chr4.nic@LIMCH1	transcript1196.chr4.nic	protein_coding	41538150,41598920,41603875,41605894,41613466,41619188,41638932,41644500,41646123,41646485,41650393,41661420,41662821,41666561,41671554,41676382,41680006,41680955,41682333,41684397,41685710,41687840,41689527,41692282,41697160	41538350,41599026,41603905,41606004,41613661,41619440,41638967,41644626,41646280,41646893,41650608,41661510,41662984,41666666,41671594,41676462,41680098,41681059,41682460,41684518,41685830,41687917,41689635,41692384,41699000	Gene ID= ENSG00000064042.17 TPM= 36.61 Transcript Type= NA
chr4	41612902	41700043	41612902	41700043	+	ENST00000396595.7@LIMCH1	ENST00000396595.7	protein_coding	41612902,41613466,41619188,41638932,41644500,41646123,41646485,41650393,41661420,41662821,41666561,41671554,41676382,41680006,41680955,41682333,41684397,41685710,41689527,41692282,41697160	41613098,41613661,41619440,41638967,41644626,41646280,41646893,41650608,41661510,41662984,41666666,41671594,41676462,41680098,41681059,41682460,41684518,41685830,41689635,41692384,41700043	Gene ID= ENSG00000064042.17 TPM= 35.28 Transcript Type= protein_coding
chr4	41635238	41639591	41635238	41639591	-	transcript1231.chr4.nnic@NA	transcript1231.chr4.nnic	NA	41635238	41639591	Gene ID= novel_gene_chr4_1232 TPM= 3.19 Transcript Type= NA
chr4	41935120	41960572	41935120	41960572	+	ENST00000504986.5@TMEM33	ENST00000504986.5	protein_coding	41935120,41938602,41939196,41943747,41944793,41949302,41954070	41935529,41938696,41939383,41943814,41944926,41949385,41960572	Gene ID= ENSG00000109133.12 TPM= 1.06 Transcript Type= protein_coding
chr4	41958930	41960800	41958930	41960800	+	transcript1239.chr4.nnic@NA	transcript1239.chr4.nnic	NA	41958930	41960800	Gene ID= novel_gene_chr4_1240 TPM= 2.12 Transcript Type= NA
chr4	41990516	42087521	41990516	42087521	+	transcript1245.chr4.nnic@SLC30A9	transcript1245.chr4.nnic	protein_coding	41990516,41990734,42001616,42018111,42020416,42022838,42023302,42035275,42038986,42049377,42060191,42062986,42065310,42066550,42067085,42070526,42075657,42078212,42086082	41990658,41990760,42001780,42018170,42020515,42022930,42023384,42035333,42039053,42049479,42060246,42063121,42065349,42066621,42067192,42070691,42075786,42078325,42087521	Gene ID= ENSG00000014824.13 TPM= 7.44 Transcript Type= NA
chr4	41990467	42098393	41990467	42098393	+	transcript1250.chr4.nnic@SLC30A9	transcript1250.chr4.nnic	protein_coding	41990467,42001616,42018111,42020416,42022838,42023302,42035275,42038986,42049377,42060191,42062986,42065310,42066550,42067085,42070526,42075657,42078212,42098042	41990760,42001780,42018170,42020515,42022930,42023384,42035333,42039053,42049479,42060246,42063121,42065349,42066621,42067192,42070691,42075786,42078325,42098393	Gene ID= ENSG00000014824.13 TPM= 3.19 Transcript Type= NA
chr4	41990467	42060526	41990467	42060526	+	transcript1258.chr4.nic@SLC30A9	transcript1258.chr4.nic	protein_coding	41990467,42001616,42018111,42020416,42022838,42023302,42035275,42038986,42049377,42060191	41990760,42001780,42018170,42020515,42022930,42023384,42035333,42039053,42049479,42060526	Gene ID= ENSG00000014824.13 TPM= 5.31 Transcript Type= NA
chr4	42408373	42657105	42408373	42657105	-	ENST00000381668.9@ATP8A1	ENST00000381668.9	protein_coding	42656825,42626995,42625614,42624536,42616033,42600478,42590811,42588260,42586349,42581621,42579813,42578260,42575622,42574619,42569161,42555968,42552505,42551198,42549013,42543917,42524763,42522160,42507016,42503450,42485496,42464893,42464690,42455525,42455297,42451981,42446583,42444578,42443565,42423617,42422807,42414627,42408373	42657105,42627109,42625713,42624634,42616078,42600518,42590884,42588329,42586476,42581732,42579978,42578387,42575699,42574707,42569205,42556040,42552610,42551280,42549062,42543986,42524847,42522299,42507154,42503514,42485668,42465076,42464800,42455599,42455419,42452059,42446644,42444634,42443672,42423705,42422899,42414718,42413013	Gene ID= ENSG00000124406.16 TPM= 6.37 Transcript Type= protein_coding
chr4	44656943	44660134	44656943	44660134	+	transcript1302.chr4.nnic@NA	transcript1302.chr4.nnic	NA	44656943	44660134	Gene ID= novel_gene_chr4_1303 TPM= 2.12 Transcript Type= NA
chr4	44678398	44697686	44678398	44697686	+	transcript1275.chr4.nic@GUF1	transcript1275.chr4.nic	protein_coding	44678398,44680441,44680694,44681123,44682334,44683235,44685959,44686510,44688007,44689286,44689843,44690717,44691666,44694412,44695615,44697408	44678787,44680552,44680842,44681203,44682411,44683318,44686023,44686713,44688146,44689409,44689975,44690860,44691799,44694513,44695734,44697686	Gene ID= ENSG00000151806.13 TPM= 3.19 Transcript Type= NA
chr4	44678429	44700926	44678429	44700926	+	ENST00000281543.5@GUF1	ENST00000281543.5	protein_coding	44678429,44680441,44680694,44681123,44682334,44683235,44685959,44686510,44688007,44689286,44689843,44690717,44691666,44694412,44695615,44697408,44698544	44678787,44680552,44680842,44681203,44682411,44683318,44686023,44686713,44688146,44689409,44689975,44690860,44691799,44694513,44695734,44697444,44700926	Gene ID= ENSG00000151806.13 TPM= 4.25 Transcript Type= protein_coding
chr4	44702139	44726595	44702139	44726595	-	ENST00000295448.7@GNPDA2	ENST00000295448.7	protein_coding	44726474,44722084,44718309,44717113,44710953,44707752,44702139	44726595,44722242,44718410,44717295,44711137,44707926,44703142	Gene ID= ENSG00000163281.11 TPM= 12.75 Transcript Type= protein_coding
chr4	44703246	44726545	44703246	44726545	-	ENST00000509756.1@GNPDA2	ENST00000509756.1	protein_coding	44726474,44722084,44718309,44717113,44710953,44703246	44726545,44722242,44718410,44717295,44711137,44707926	Gene ID= ENSG00000163281.11 TPM= 1.06 Transcript Type= protein_coding
chr4	46918900	46994407	46918900	46994407	-	ENST00000264318.3@GABRA4	ENST00000264318.3	protein_coding	46993339,46992828,46979031,46977410,46977061,46974232,46971083,46964970,46918900	46994407,46992946,46979098,46977630,46977143,46974375,46971235,46965229,46928755	Gene ID= ENSG00000109158.10 TPM= 5.31 Transcript Type= protein_coding
chr4	46928127	46994298	46928127	46994298	-	transcript1320.chr4.nic@GABRA4	transcript1320.chr4.nic	protein_coding	46993339,46992828,46979031,46977410,46977061,46974232,46964970,46928127	46994298,46992946,46979098,46977630,46977143,46974375,46965229,46928755	Gene ID= ENSG00000109158.10 TPM= 2.12 Transcript Type= NA
chr4	47031360	47426444	47031360	47426444	+	ENST00000295454.7@GABRB1	ENST00000295454.7	protein_coding	47031360,47031914,47032417,47161249,47320127,47403318,47403559,47406682,47425674	47031731,47032005,47032484,47161469,47320209,47403455,47403711,47406926,47426444	Gene ID= ENSG00000163288.13 TPM= 2.12 Transcript Type= protein_coding
chr4	47031571	47282073	47031571	47282073	+	transcript1327.chr4.nnic@GABRB1	transcript1327.chr4.nnic	protein_coding	47031571,47031914,47032417,47161249,47281025	47031731,47032005,47032484,47161469,47282073	Gene ID= ENSG00000163288.13 TPM= 2.12 Transcript Type= NA
chr4	47450796	47463719	47450796	47463719	-	ENST00000381571.5@COMMD8	ENST00000381571.5	protein_coding	47463586,47460144,47456577,47453059,47450796	47463719,47460299,47456729,47453214,47451665	Gene ID= ENSG00000169019.10 TPM= 12.75 Transcript Type= protein_coding
chr4	47485282	47547101	47485282	47547101	+	transcript1342.chr4.nic@ATP10D	transcript1342.chr4.nic	protein_coding	47485282,47512504,47515476,47523012,47525557,47535509,47535902,47536437,47536686,47546624	47485519,47512830,47515670,47523216,47525642,47535615,47536033,47536564,47536938,47547101	Gene ID= ENSG00000145246.13 TPM= 2.12 Transcript Type= NA
chr4	47847240	47914616	47847240	47914616	-	ENST00000381538.7@NFXL1	ENST00000381538.7	protein_coding	47914550,47913969,47910824,47905237,47903193,47899370,47898959,47898757,47897967,47896523,47894180,47890613,47885879,47885498,47884346,47879096,47878525,47875127,47862846,47855059,47851856,47851095,47847240	47914616,47914205,47910994,47905346,47903323,47899548,47899120,47898857,47898081,47896647,47894302,47890703,47885999,47885657,47884437,47879117,47878665,47875293,47862915,47855163,47851942,47851148,47848336	Gene ID= ENSG00000170448.11 TPM= 3.19 Transcript Type= protein_coding
chr4	48016774	48040173	48016774	48040173	+	ENST00000295461.9@NIPAL1	ENST00000295461.9	protein_coding	48016774,48025068,48030120,48032993,48034881,48035562	48016885,48025334,48030176,48033083,48035041,48040173	Gene ID= ENSG00000163293.11 TPM= 1.06 Transcript Type= protein_coding
chr4	48135783	48269864	48135783	48269864	-	ENST00000381501.7@TEC	ENST00000381501.7	protein_coding	48269752,48228477,48176082,48171368,48170248,48168586,48167778,48163702,48156680,48150863,48149557,48146325,48145408,48145079,48141355,48138904,48138665,48135783	48269864,48228659,48176186,48171449,48170376,48168626,48167953,48163767,48156734,48150942,48149690,48146399,48145579,48145295,48141419,48139022,48138822,48137499	Gene ID= ENSG00000135605.12 TPM= 1.06 Transcript Type= protein_coding
chr4	48293671	48297735	48293671	48297735	+	transcript1368.chr4.nnic@NA	transcript1368.chr4.nnic	NA	48293671	48297735	Gene ID= novel_gene_chr4_1369 TPM= 3.19 Transcript Type= NA
chr4	48341452	48425015	48341452	48425015	+	transcript1375.chr4.nic@SLAIN2	transcript1375.chr4.nic	protein_coding	48341452,48369849,48377896,48379690,48382568,48383647,48394576,48420125,48422011	48342128,48369997,48378060,48379848,48382927,48383784,48394653,48420443,48425015	Gene ID= ENSG00000109171.14 TPM= 16.11 Transcript Type= NA
chr4	48341322	48426212	48341322	48426212	+	ENST00000264313.10@SLAIN2	ENST00000264313.10	protein_coding	48341322,48369849,48377896,48379690,48382568,48383647,48420125,48422011	48342128,48369997,48378060,48379848,48382927,48383784,48420443,48426212	Gene ID= ENSG00000109171.14 TPM= 11.68 Transcript Type= protein_coding
chr4	48342713	48346292	48342713	48346292	-	transcript1381.chr4.nnic@NA	transcript1381.chr4.nnic	NA	48342713	48346292	Gene ID= novel_gene_chr4_1382 TPM= 35.05 Transcript Type= NA
chr4	48680349	48780312	48680349	48780312	-	transcript1388.chr4.nic@FRYL	transcript1388.chr4.nic	protein_coding	48780078,48710519,48680349	48780312,48710698,48684795	Gene ID= ENSG00000075539.14 TPM= 2.12 Transcript Type= NA
chr4	48779012	48780149	48779012	48780149	-	transcript1391.chr4.nnic@NA	transcript1391.chr4.nnic	NA	48779012	48780149	Gene ID= novel_gene_chr4_1392 TPM= 2.12 Transcript Type= NA
chr4	48831027	48861248	48831027	48861248	+	transcript1394.chr4.nic@OCIAD1	transcript1394.chr4.nic	protein_coding	48831027,48832620,48833401,48842636,48848399,48849947,48851806,48857213,48860725	48831052,48832682,48833481,48842689,48848446,48850082,48851975,48857365,48861248	Gene ID= ENSG00000109180.14 TPM= 10.62 Transcript Type= NA
chr4	48831084	48861200	48831084	48861200	+	ENST00000381473.7@OCIAD1	ENST00000381473.7	protein_coding	48831084,48832620,48833401,48842636,48848399,48849947,48851806,48857213,48860725	48831496,48832682,48833481,48842689,48848446,48850082,48851975,48857365,48861200	Gene ID= ENSG00000109180.14 TPM= 2.12 Transcript Type= protein_coding
chr4	48831065	48861248	48831065	48861248	+	ENST00000264312.11@OCIAD1	ENST00000264312.11	protein_coding	48831065,48832620,48833401,48842636,48848399,48849947,48851806,48857213,48860725	48831249,48832682,48833481,48842689,48848446,48850082,48851975,48857365,48861248	Gene ID= ENSG00000109180.14 TPM= 50.98 Transcript Type= protein_coding
chr4	48831342	48861250	48831342	48861250	+	ENST00000513391.2@OCIAD1	ENST00000513391.2	protein_coding	48831342,48832620,48833401,48842636,48848399,48849947,48851806,48857213,48860725	48831398,48832682,48833481,48842689,48848446,48850082,48851975,48857365,48861250	Gene ID= ENSG00000109180.14 TPM= 7.44 Transcript Type= protein_coding
chr4	48852867	48855967	48852867	48855967	-	transcript1407.chr4.nnic@NA	transcript1407.chr4.nnic	NA	48852867	48855967	Gene ID= novel_gene_chr4_1408 TPM= 6.37 Transcript Type= NA
chr4	48858082	48861247	48858082	48861247	+	transcript1405.chr4.nnic@NA	transcript1405.chr4.nnic	NA	48858082	48861247	Gene ID= novel_gene_chr4_1406 TPM= 2.12 Transcript Type= NA
chr4	48885019	48906828	48885019	48906828	-	ENST00000508632.5@OCIAD2	ENST00000508632.5	protein_coding	48906658,48904484,48899829,48897804,48894006,48892772,48885019	48906828,48904611,48899925,48897857,48894053,48892889,48885565	Gene ID= ENSG00000145247.11 TPM= 14.87 Transcript Type= protein_coding
chr4	48885382	48906937	48885382	48906937	-	ENST00000508069.6@OCIAD2	ENST00000508069.6	protein_coding	48906658,48904484,48897804,48894006,48892772,48885382	48906937,48904611,48897857,48894053,48892889,48885565	Gene ID= ENSG00000145247.11 TPM= 3.19 Transcript Type= processed_transcript
chr4	48885388	48906788	48885388	48906788	-	ENST00000273860.8@OCIAD2	ENST00000273860.8	protein_coding	48906658,48904484,48899829,48897804,48894006,48885388	48906788,48904611,48899925,48897857,48894053,48885565	Gene ID= ENSG00000145247.11 TPM= 1.06 Transcript Type= protein_coding
chr4	51843579	51916835	51843579	51916835	+	ENST00000451288.6@DCUN1D4	ENST00000451288.6	protein_coding	51843579,51863437,51863670,51874271,51877763,51886568,51891760,51899270,51911070,51913290,51913529	51843742,51863507,51863709,51874385,51877854,51886638,51891851,51899378,51911174,51913392,51916835	Gene ID= ENSG00000109184.14 TPM= 2.12 Transcript Type= protein_coding
chr4	51843125	51874367	51843125	51874367	+	transcript1438.chr4.nic@DCUN1D4	transcript1438.chr4.nic	protein_coding	51843125,51863437,51863670,51874271	51843267,51863507,51863709,51874367	Gene ID= ENSG00000109184.14 TPM= 2.12 Transcript Type= NA
chr4	52020706	52038482	52020706	52038482	-	ENST00000381431.9@SGCB	ENST00000381431.9	protein_coding	52038227,52033431,52029678,52028730,52027968,52020706	52038482,52033640,52029863,52028921,52028099,52024160	Gene ID= ENSG00000163069.12 TPM= 164.85 Transcript Type= protein_coding
chr4	52510926	52513023	52510926	52513023	-	transcript1477.chr4.nnic@NA	transcript1477.chr4.nnic	NA	52510926	52513023	Gene ID= novel_gene_chr4_1478 TPM= 2.12 Transcript Type= NA
chr4	52517339	52551597	52517339	52551597	-	transcript1473.chr4.nnic@NA	transcript1473.chr4.nnic	NA	52551473,52521233,52517339	52551597,52521383,52519462	Gene ID= novel_gene_chr4_1474 TPM= 4.25 Transcript Type= NA
chr4	52626128	52659304	52626128	52659304	-	transcript1491.chr4.nic@USP46	transcript1491.chr4.nic	protein_coding	52659115,52631064,52627950,52626128	52659304,52631144,52628163,52626247	Gene ID= ENSG00000109189.12 TPM= 9.56 Transcript Type= NA
chr4	52590972	52659335	52590972	52659335	-	ENST00000441222.7@USP46	ENST00000441222.7	protein_coding	52659115,52631064,52627950,52626018,52610541,52604501,52601857,52598628,52590972	52659335,52631144,52628163,52626247,52610617,52604584,52602054,52598706,52597741	Gene ID= ENSG00000109189.12 TPM= 6.37 Transcript Type= protein_coding
chr4	52640596	52645241	52640596	52645241	+	transcript1497.chr4.nnic@NA	transcript1497.chr4.nnic	NA	52640596	52645241	Gene ID= novel_gene_chr4_1498 TPM= 4.25 Transcript Type= NA
chr4	52712404	52714137	52712404	52714137	+	ENST00000411630.6@DANCR	ENST00000411630.6	processed_transcript	52712404,52712824,52713494	52712527,52712959,52714137	Gene ID= ENSG00000226950.6 TPM= 242.17 Transcript Type= lincRNA
chr4	52742552	52751640	52742552	52751640	-	ENST00000443173.5@ERVMER34-1	ENST00000443173.5	protein_coding	52751343,52750930,52742552	52751640,52751069,52745943	Gene ID= ENSG00000226887.7 TPM= 1.06 Transcript Type= protein_coding
chr4	52862315	52866832	52862315	52866832	+	transcript1508.chr4.nnic@RASL11B	transcript1508.chr4.nnic	protein_coding	52862315,52863268,52864478,52865335,52865677	52862649,52863324,52864554,52865564,52866832	Gene ID= ENSG00000128045.6 TPM= 4.78 Transcript Type= NA
chr4	52862290	52866835	52862290	52866835	+	ENST00000248706.4@RASL11B	ENST00000248706.4	protein_coding	52862290,52863268,52864478,52865335	52862649,52863324,52864554,52866835	Gene ID= ENSG00000128045.6 TPM= 11.15 Transcript Type= protein_coding
chr4	52872634	52920871	52872634	52920871	-	transcript1512.chr4.nic@SCFD2	transcript1512.chr4.nic	protein_coding	52920725,52907457,52885747,52872634	52920871,52907591,52885866,52874061	Gene ID= ENSG00000184178.15 TPM= 2.12 Transcript Type= NA
chr4	52940410	52942956	52940410	52942956	+	transcript1514.chr4.nnic@NA	transcript1514.chr4.nnic	NA	52940410	52942956	Gene ID= novel_gene_chr4_1515 TPM= 2.12 Transcript Type= NA
chr4	53377579	53459621	53377579	53459621	+	transcript1520.chr4.nic@FIP1L1	transcript1520.chr4.nic	protein_coding	53377579,53379073,53379225,53382278,53383773,53389809,53390521,53391009,53391430,53399730,53414615,53425872,53428027,53440582,53442653,53444048,53452920,53458653,53459302	53377923,53379117,53379264,53382335,53383876,53389873,53390628,53391139,53391498,53399839,53414722,53425965,53428183,53440608,53442707,53444103,53453133,53458790,53459621	Gene ID= ENSG00000145216.15 TPM= 5.31 Transcript Type= NA
chr4	53377651	53459621	53377651	53459621	+	transcript1527.chr4.nic@FIP1L1	transcript1527.chr4.nic	protein_coding	53377651,53379073,53379225,53382278,53383773,53389809,53390521,53391009,53399730,53414615,53425872,53428027,53440582,53442653,53444048,53452920,53458653,53459302	53377923,53379117,53379264,53382335,53383876,53389873,53390628,53391139,53399839,53414722,53425965,53428183,53440608,53442707,53444103,53453133,53458790,53459621	Gene ID= ENSG00000145216.15 TPM= 2.12 Transcript Type= NA
chr4	53377579	53459621	53377579	53459621	+	transcript1531.chr4.nic@FIP1L1	transcript1531.chr4.nic	protein_coding	53377579,53379073,53379225,53382278,53383773,53389809,53390521,53391009,53391430,53399730,53425872,53428027,53442653,53444048,53452920,53458653,53459302	53377923,53379117,53379264,53382335,53383876,53389873,53390628,53391139,53391498,53399839,53425965,53428183,53442707,53444103,53453133,53458790,53459621	Gene ID= ENSG00000145216.15 TPM= 4.46 Transcript Type= NA
chr4	53377663	53459668	53377663	53459668	+	transcript1537.chr4.nic@FIP1L1	transcript1537.chr4.nic	protein_coding	53377663,53379073,53379225,53382278,53383773,53389809,53390521,53391009,53399730,53425872,53428027,53440582,53442653,53444048,53452920,53458653,53459302	53377923,53379117,53379264,53382335,53383876,53389873,53390628,53391139,53399839,53425965,53428183,53440608,53442707,53444103,53453133,53458790,53459668	Gene ID= ENSG00000145216.15 TPM= 2.12 Transcript Type= NA
chr4	53377663	53459668	53377663	53459668	+	transcript1541.chr4.nic@FIP1L1	transcript1541.chr4.nic	protein_coding	53377663,53379225,53382278,53383773,53389809,53390521,53391009,53399730,53414615,53425872,53428027,53440582,53442653,53444048,53452920,53458653,53459302	53377923,53379264,53382335,53383876,53389873,53390628,53391139,53399839,53414722,53425965,53428183,53440608,53442707,53444103,53453133,53458790,53459668	Gene ID= ENSG00000145216.15 TPM= 3.19 Transcript Type= NA
chr4	53414521	53459621	53414521	53459621	+	transcript1551.chr4.nic@FIP1L1	transcript1551.chr4.nic	protein_coding	53414521,53425872,53428027,53440582,53442653,53444048,53452920,53458653,53459302	53414722,53425965,53428183,53440608,53442707,53444103,53453133,53458790,53459621	Gene ID= ENSG00000145216.15 TPM= 2.12 Transcript Type= NA
chr4	53377645	53459668	53377645	53459668	+	ENST00000337488.10@FIP1L1	ENST00000337488.10	protein_coding	53377645,53379073,53379225,53382278,53383773,53389809,53390521,53391009,53391430,53399730,53414615,53425872,53428027,53442653,53444048,53452920,53458653,53459302	53377923,53379117,53379264,53382335,53383876,53389873,53390628,53391139,53391498,53399839,53414722,53425965,53428183,53442707,53444103,53453133,53458790,53459668	Gene ID= ENSG00000145216.15 TPM= 2.34 Transcript Type= protein_coding
chr4	53377645	53378376	53377645	53378376	+	transcript1554.chr4.nnic@NA	transcript1554.chr4.nnic	NA	53377645	53378376	Gene ID= novel_gene_chr4_1555 TPM= 2.12 Transcript Type= NA
chr4	54009789	54064690	54009789	54064690	-	ENST00000263921.7@CHIC2	ENST00000263921.7	protein_coding	54064182,54049251,54048955,54014063,54013837,54009789	54064690,54049305,54049110,54014119,54013896,54010145	Gene ID= ENSG00000109220.10 TPM= 15.93 Transcript Type= protein_coding
chr4	54284880	54287439	54284880	54287439	+	transcript1566.chr4.nic@AC058822.1	transcript1566.chr4.nic	protein_coding	54284880,54285841	54285486,54287439	Gene ID= ENSG00000282278.1 TPM= 2.12 Transcript Type= NA
chr4	54229097	54298247	54229097	54298247	+	ENST00000257290.9@PDGFRA	ENST00000257290.9	protein_coding	54229097,54258757,54261095,54263667,54264919,54267289,54267552,54270633,54272394,54273537,54274531,54274841,54277388,54277896,54278362,54280316,54285371,54285841,54287430,54288799,54289009,54290313,54295125	54229415,54258817,54261412,54263927,54265049,54267460,54267741,54270748,54272520,54273730,54274625,54274973,54277492,54278006,54278515,54280482,54285486,54285963,54287541,54288898,54289114,54290554,54298247	Gene ID= ENSG00000134853.11 TPM= 9.56 Transcript Type= protein_coding
chr4	55075322	55077965	55075322	55077965	-	transcript1569.chr4.nnic@NA	transcript1569.chr4.nnic	NA	55075322	55077965	Gene ID= novel_gene_chr4_1570 TPM= 2.12 Transcript Type= NA
chr4	55078477	55125589	55078477	55125589	-	ENST00000263923.4@KDR	ENST00000263923.4	protein_coding	55125227,55121097,55118604,55115281,55114874,55114126,55113304,55110654,55110403,55107737,55106687,55105832,55104643,55102362,55101897,55098697,55098137,55097662,55096229,55095577,55094802,55092617,55089956,55089691,55089374,55088868,55087607,55082536,55081956,55078477	55125589,55121190,55118800,55115411,55115042,55114265,55113481,55110768,55110566,55107893,55106810,55105940,55104984,55102508,55102028,55098803,55098272,55097766,55096342,55095665,55094955,55092714,55090078,55089802,55089473,55088973,55087758,55082635,55082041,55080163	Gene ID= ENSG00000128052.8 TPM= 10.62 Transcript Type= protein_coding
chr4	55346109	55373096	55346109	55373096	+	ENST00000264228.8@SRD5A3	ENST00000264228.8	protein_coding	55346109,55359346,55364074,55367588,55369832	55346557,55359488,55364271,55367722,55373096	Gene ID= ENSG00000128039.10 TPM= 12.75 Transcript Type= protein_coding
chr4	55385616	55388527	55385616	55388527	+	transcript1599.chr4.nnic@NA	transcript1599.chr4.nnic	NA	55385616	55388527	Gene ID= novel_gene_chr4_1600 TPM= 2.12 Transcript Type= NA
chr4	55395653	55397505	55395653	55397505	+	transcript1597.chr4.nnic@NA	transcript1597.chr4.nnic	NA	55395653	55397505	Gene ID= novel_gene_chr4_1598 TPM= 8.5 Transcript Type= NA
chr4	55395923	55453397	55395923	55453397	+	transcript1585.chr4.nic@TMEM165	transcript1585.chr4.nic	protein_coding	55395923,55411614,55417072,55417803,55424538,55452239	55396396,55411839,55417247,55417985,55424643,55453397	Gene ID= ENSG00000134851.12 TPM= 6.37 Transcript Type= NA
chr4	55395957	55426172	55395957	55426172	+	ENST00000381334.9@TMEM165	ENST00000381334.9	protein_coding	55395957,55411614,55417072,55417803,55424538,55425376	55396396,55411839,55417247,55417985,55424643,55426172	Gene ID= ENSG00000134851.12 TPM= 92.41 Transcript Type= protein_coding
chr4	55402797	55405840	55402797	55405840	-	transcript1601.chr4.nnic@NA	transcript1601.chr4.nnic	NA	55402797	55405840	Gene ID= novel_gene_chr4_1602 TPM= 11.68 Transcript Type= NA
chr4	55408924	55410017	55408924	55410017	-	transcript1603.chr4.nnic@NA	transcript1603.chr4.nnic	NA	55408924	55410017	Gene ID= novel_gene_chr4_1604 TPM= 2.12 Transcript Type= NA
chr4	55421299	55422883	55421299	55422883	-	transcript1605.chr4.nnic@NA	transcript1605.chr4.nnic	NA	55421299	55422883	Gene ID= novel_gene_chr4_1606 TPM= 4.25 Transcript Type= NA
chr4	55428024	55429880	55428024	55429880	-	transcript1607.chr4.nnic@NA	transcript1607.chr4.nnic	NA	55428024	55429880	Gene ID= novel_gene_chr4_1608 TPM= 2.12 Transcript Type= NA
chr4	55853646	55905013	55853646	55905013	+	transcript1610.chr4.nnic@EXOC1	transcript1610.chr4.nnic	protein_coding	55853646,55858314,55860411,55864227,55868336,55870678,55871101,55871849,55872755,55877917,55883823,55890223,55891315,55892635,55893552,55896717,55899685,55902344,55904343	55853797,55858447,55860541,55864386,55868523,55870905,55871233,55871958,55872808,55878066,55883928,55890386,55891422,55892711,55893780,55896900,55899884,55902538,55905013	Gene ID= ENSG00000090989.17 TPM= 8.5 Transcript Type= NA
chr4	55853654	55905013	55853654	55905013	+	transcript1611.chr4.nnic@EXOC1	transcript1611.chr4.nnic	protein_coding	55853654,55858314,55860411,55864227,55868336,55870678,55871101,55871849,55872755,55877917,55883823,55890223,55891315,55892635,55893552,55896717,55899685,55902344,55904343	55853953,55858447,55860541,55864386,55868523,55870905,55871233,55871958,55872808,55878066,55883928,55890386,55891422,55892711,55893780,55896900,55899884,55902538,55905013	Gene ID= ENSG00000090989.17 TPM= 6.37 Transcript Type= NA
chr4	55853616	55905013	55853616	55905013	+	ENST00000381295.6@EXOC1	ENST00000381295.6	protein_coding	55853616,55858314,55860411,55864227,55868336,55870678,55871101,55871849,55877917,55883823,55888888,55890223,55891315,55892635,55893552,55896717,55899685,55902344,55904343	55853953,55858447,55860541,55864386,55868523,55870905,55871233,55871958,55878066,55883928,55888932,55890386,55891422,55892711,55893780,55896900,55899884,55902538,55905013	Gene ID= ENSG00000090989.17 TPM= 2.12 Transcript Type= protein_coding
chr4	55853654	55905013	55853654	55905013	+	transcript1618.chr4.nic@EXOC1	transcript1618.chr4.nic	protein_coding	55853654,55858314,55860411,55864227,55868336,55870678,55871101,55871849,55877917,55883823,55890223,55891315,55892635,55893552,55896717,55899685,55902344,55904343	55853953,55858447,55860541,55864386,55868523,55870905,55871233,55871958,55878066,55883928,55890386,55891422,55892711,55893780,55896900,55899884,55902538,55905013	Gene ID= ENSG00000090989.17 TPM= 10.62 Transcript Type= NA
chr4	56338290	56387500	56338290	56387500	-	ENST00000205214.10@AASDH	ENST00000205214.10	protein_coding	56387362,56384070,56382477,56378148,56371451,56355182,56354705,56354039,56353404,56351342,56349263,56345127,56343562,56342835,56338290	56387500,56384341,56382597,56378464,56371643,56355423,56354811,56354211,56353596,56351457,56350058,56345290,56343684,56342966,56338791	Gene ID= ENSG00000157426.13 TPM= 1.06 Transcript Type= protein_coding
chr4	56348928	56387500	56348928	56387500	-	ENST00000502617.1@AASDH	ENST00000502617.1	protein_coding	56387362,56384070,56382477,56378148,56371451,56355182,56354705,56354039,56353404,56351342,56348928	56387500,56384341,56382597,56378464,56371643,56355423,56354811,56354211,56353596,56351457,56350058	Gene ID= ENSG00000157426.13 TPM= 1.06 Transcript Type= protein_coding
chr4	56393362	56435615	56393362	56435615	-	ENST00000264220.6@PPAT	ENST00000264220.6	protein_coding	56435350,56407650,56406495,56403289,56403040,56402109,56401330,56400784,56399179,56396619,56393362	56435615,56407716,56406701,56403401,56403185,56402181,56401481,56400911,56399400,56396739,56395548	Gene ID= ENSG00000128059.8 TPM= 1.06 Transcript Type= protein_coding
chr4	56436138	56461361	56436138	56461361	+	ENST00000399688.7@PAICS	ENST00000399688.7	protein_coding	56436138,56441663,56446357,56446695,56448418,56448710,56450619,56451872,56453603,56459372	56436328,56441860,56446377,56446873,56448597,56448823,56450702,56452052,56453761,56461361	Gene ID= ENSG00000128050.8 TPM= 14.87 Transcript Type= protein_coding
chr4	56452373	56453541	56452373	56453541	+	transcript1644.chr4.nnic@NA	transcript1644.chr4.nnic	NA	56452373	56453541	Gene ID= novel_gene_chr4_1645 TPM= 2.12 Transcript Type= NA
chr4	56464700	56466507	56464700	56466507	+	transcript1646.chr4.nnic@NA	transcript1646.chr4.nnic	NA	56464700	56466507	Gene ID= novel_gene_chr4_1647 TPM= 9.56 Transcript Type= NA
chr4	56466915	56503107	56466915	56503107	+	ENST00000342756.9@SRP72	ENST00000342756.9	protein_coding	56466915,56469653,56471720,56474054,56474280,56476671,56478379,56478592,56483139,56484736,56486325,56487949,56489388,56490333,56490568,56491431,56495357,56500536,56501684	56467744,56469773,56471843,56474197,56474391,56476702,56478503,56478649,56483270,56484864,56486397,56488013,56489483,56490436,56490645,56491568,56495394,56500695,56503107	Gene ID= ENSG00000174780.15 TPM= 9.56 Transcript Type= protein_coding
chr4	56482366	56485421	56482366	56485421	+	transcript1658.chr4.nic@SRP72	transcript1658.chr4.nic	protein_coding	56482366,56484736	56483270,56485421	Gene ID= ENSG00000174780.15 TPM= 2.12 Transcript Type= NA
chr4	56477302	56479403	56477302	56479403	+	transcript1660.chr4.nic@SRP72	transcript1660.chr4.nic	protein_coding	56477302,56478592	56478503,56479403	Gene ID= ENSG00000174780.15 TPM= 3.19 Transcript Type= NA
chr4	56467618	56474508	56467618	56474508	+	ENST00000504757.2@SRP72	ENST00000504757.2	protein_coding	56467618,56469653,56471720,56474054,56474280	56467744,56469773,56471843,56474197,56474508	Gene ID= ENSG00000174780.15 TPM= 2.12 Transcript Type= protein_coding
chr4	56647998	56656525	56647998	56656525	-	ENST00000556614.6@HOPX	ENST00000556614.6	protein_coding	56656344,56655857,56647998	56656525,56656012,56648797	Gene ID= ENSG00000171476.21 TPM= 2.47 Transcript Type= protein_coding
chr4	56647988	56681899	56647988	56681899	-	ENST00000337881.11@HOPX	ENST00000337881.11	protein_coding	56681255,56655857,56647988	56681899,56656012,56648797	Gene ID= ENSG00000171476.21 TPM= 4.6 Transcript Type= protein_coding
chr4	56647998	56656304	56647998	56656304	-	ENST00000503639.7@HOPX	ENST00000503639.7	protein_coding	56655857,56647998	56656304,56648797	Gene ID= ENSG00000171476.21 TPM= 1.41 Transcript Type= protein_coding
chr4	56907909	56935844	56907909	56935844	+	ENST00000309042.11@REST	ENST00000309042.11	protein_coding	56907909,56910630,56919787,56929841	56908213,56911536,56919870,56935844	Gene ID= ENSG00000084093.16 TPM= 13.81 Transcript Type= protein_coding
chr4	56963370	56978823	56963370	56978823	-	ENST00000264230.4@NOA1	ENST00000264230.4	protein_coding	56976442,56973858,56973148,56968384,56966620,56964406,56963370	56978823,56974022,56973353,56968515,56966736,56964526,56963661	Gene ID= ENSG00000084092.6 TPM= 41.42 Transcript Type= protein_coding
chr4	56977650	57031158	56977650	57031158	+	transcript1684.chr4.nic@POLR2B	transcript1684.chr4.nic	protein_coding	56977650,56978640,56986354,56990748,56994404,56994647,56995251,56999617,57005246,57005600,57006816,57010361,57010748,57010989,57015502,57017043,57017560,57020899,57022152,57023330,57023662,57024005,57024886,57025377,57030204,57030899	56977791,56979004,56986426,56990898,56994516,56994866,56995409,56999781,57005442,57005719,57007002,57010504,57010887,57011100,57015656,57017241,57017728,57020995,57022246,57023580,57023751,57024112,57024999,57025537,57030399,57031158	Gene ID= ENSG00000047315.15 TPM= 35.58 Transcript Type= NA
chr4	56977742	57031158	56977742	57031158	+	ENST00000381227.5@POLR2B	ENST00000381227.5	protein_coding	56977742,56978640,56986354,56990748,56994404,56994647,56995251,56999617,57005246,57005600,57006816,57010361,57010748,57010989,57015502,57017043,57017560,57020899,57022152,57023330,57023662,57024005,57024886,57025377,57030204,57030899	56977808,56979004,56986426,56990898,56994516,56994866,56995409,56999781,57005442,57005719,57007002,57010504,57010887,57011100,57015656,57017241,57017728,57020995,57022246,57023580,57023751,57024112,57024999,57025537,57030399,57031158	Gene ID= ENSG00000047315.15 TPM= 35.58 Transcript Type= protein_coding
chr4	56978864	57031158	56978864	57031158	+	ENST00000431623.6@POLR2B	ENST00000431623.6	protein_coding	56978864,56986354,56994404,56994647,56995251,56999617,57005246,57005600,57006816,57010361,57010748,57010989,57015502,57017043,57017560,57020899,57022152,57023330,57023662,57024005,57024886,57025377,57030204,57030899	56979004,56986426,56994516,56994866,56995409,56999781,57005442,57005719,57007002,57010504,57010887,57011100,57015656,57017241,57017728,57020995,57022246,57023580,57023751,57024112,57024999,57025537,57030399,57031158	Gene ID= ENSG00000047315.15 TPM= 6.37 Transcript Type= protein_coding
chr4	57030773	57110385	57030773	57110385	-	ENST00000295666.6@IGFBP7	ENST00000295666.6	protein_coding	57109877,57040824,57033195,57032426,57030773	57110385,57040933,57033311,57032552,57031336	Gene ID= ENSG00000163453.11 TPM= 12.21 Transcript Type= protein_coding
chr4	62133742	62148189	62133742	62148189	+	transcript1711.chr4.nnic@NA	transcript1711.chr4.nnic	NA	62133742,62137737,62145134	62134051,62137823,62148189	Gene ID= novel_gene_chr4_1712 TPM= 5.31 Transcript Type= NA
chr4	62133852	62140664	62133852	62140664	+	transcript1719.chr4.nnic@NA	transcript1719.chr4.nnic	NA	62133852	62140664	Gene ID= novel_gene_chr4_1720 TPM= 2.12 Transcript Type= NA
chr4	62149933	62152663	62149933	62152663	+	transcript1721.chr4.nnic@NA	transcript1721.chr4.nnic	NA	62149933	62152663	Gene ID= novel_gene_chr4_1722 TPM= 2.12 Transcript Type= NA
chr4	64228230	64234535	64228230	64234535	+	transcript1733.chr4.nnic@NA	transcript1733.chr4.nnic	NA	64228230	64234535	Gene ID= novel_gene_chr4_1734 TPM= 3.19 Transcript Type= NA
chr4	64277702	64409462	64277702	64409462	-	ENST00000381210.7@TECRL	ENST00000381210.7	protein_coding	64409118,64375172,64328512,64322689,64314648,64309826,64305166,64299974,64289710,64281474,64281041,64277702	64409462,64375223,64328556,64322792,64314763,64309931,64305238,64300017,64289767,64281559,64281086,64280199	Gene ID= ENSG00000205678.7 TPM= 8.72 Transcript Type= protein_coding
chr4	64311156	64312778	64311156	64312778	+	transcript1794.chr4.nnic@NA	transcript1794.chr4.nnic	NA	64311156	64312778	Gene ID= novel_gene_chr4_1795 TPM= 10.62 Transcript Type= NA
chr4	64315169	64317151	64315169	64317151	-	transcript1822.chr4.nnic@NA	transcript1822.chr4.nnic	NA	64315169	64317151	Gene ID= novel_gene_chr4_1823 TPM= 3.19 Transcript Type= NA
chr4	64317437	64322473	64317437	64322473	+	transcript1798.chr4.nnic@NA	transcript1798.chr4.nnic	NA	64317437	64322473	Gene ID= novel_gene_chr4_1799 TPM= 164.63 Transcript Type= NA
chr4	64347074	64349077	64347074	64349077	+	transcript1808.chr4.nnic@NA	transcript1808.chr4.nnic	NA	64347074	64349077	Gene ID= novel_gene_chr4_1809 TPM= 3.19 Transcript Type= NA
chr4	64353558	64355804	64353558	64355804	+	transcript1804.chr4.nnic@NA	transcript1804.chr4.nnic	NA	64353558	64355804	Gene ID= novel_gene_chr4_1805 TPM= 4.25 Transcript Type= NA
chr4	64362457	64365218	64362457	64365218	+	transcript1802.chr4.nnic@NA	transcript1802.chr4.nnic	NA	64362457	64365218	Gene ID= novel_gene_chr4_1803 TPM= 4.25 Transcript Type= NA
chr4	64368302	64374567	64368302	64374567	-	transcript1824.chr4.nnic@NA	transcript1824.chr4.nnic	NA	64368302	64374567	Gene ID= novel_gene_chr4_1825 TPM= 4.25 Transcript Type= NA
chr4	64383467	64386088	64383467	64386088	-	transcript1818.chr4.nnic@NA	transcript1818.chr4.nnic	NA	64383467	64386088	Gene ID= novel_gene_chr4_1819 TPM= 4.25 Transcript Type= NA
chr4	64388222	64392634	64388222	64392634	-	transcript1814.chr4.nnic@NA	transcript1814.chr4.nnic	NA	64388222	64392634	Gene ID= novel_gene_chr4_1815 TPM= 4.25 Transcript Type= NA
chr4	64395721	64404234	64395721	64404234	+	transcript1800.chr4.nnic@NA	transcript1800.chr4.nnic	NA	64395721	64404234	Gene ID= novel_gene_chr4_1801 TPM= 13.81 Transcript Type= NA
chr4	64405274	64407023	64405274	64407023	+	transcript1796.chr4.nnic@NA	transcript1796.chr4.nnic	NA	64405274	64407023	Gene ID= novel_gene_chr4_1797 TPM= 7.44 Transcript Type= NA
chr4	64407774	64409398	64407774	64409398	-	transcript1816.chr4.nnic@NA	transcript1816.chr4.nnic	NA	64407774	64409398	Gene ID= novel_gene_chr4_1817 TPM= 5.31 Transcript Type= NA
chr4	67468411	67470600	67468411	67470600	+	transcript1829.chr4.nnic@NA	transcript1829.chr4.nnic	NA	67468411	67470600	Gene ID= novel_gene_chr4_1830 TPM= 6.37 Transcript Type= NA
chr4	67468748	67545606	67468748	67545606	-	ENST00000273853.10@CENPC	ENST00000273853.10	protein_coding	67545338,67544149,67540980,67539840,67530815,67519217,67518156,67514074,67512402,67508814,67506788,67505205,67495159,67493884,67492869,67492180,67489967,67474888,67468748	67545606,67544195,67541050,67539934,67530914,67519502,67518368,67514687,67512569,67509105,67506934,67505284,67495212,67493988,67492997,67492275,67490121,67474978,67472675	Gene ID= ENSG00000145241.10 TPM= 3.19 Transcript Type= protein_coding
chr4	67612652	67701179	67612652	67701179	-	ENST00000322244.9@UBA6	ENST00000322244.9	protein_coding	67701049,67696645,67682119,67681563,67678439,67677611,67673697,67670470,67668551,67665189,67663885,67663139,67662189,67649068,67646724,67645938,67644698,67641151,67638943,67635453,67634429,67634242,67633345,67631857,67631708,67630466,67629071,67626360,67624994,67624126,67623135,67622831,67612652	67701179,67696707,67682213,67681591,67678533,67677722,67673777,67670592,67668674,67665292,67663947,67663215,67662255,67649211,67646791,67646016,67644778,67641228,67639124,67635558,67634518,67634322,67633473,67631908,67631771,67630535,67629142,67626477,67625187,67624253,67623222,67622925,67619132	Gene ID= ENSG00000033178.12 TPM= 2.12 Transcript Type= protein_coding
chr4	67661663	67701153	67661663	67701153	-	ENST00000420827.2@UBA6	ENST00000420827.2	protein_coding	67701049,67696645,67682119,67681563,67678439,67677611,67673697,67670470,67668551,67665189,67663885,67663139,67661663	67701153,67696707,67682213,67681591,67678533,67677722,67673777,67670592,67668674,67665292,67663947,67663215,67662255	Gene ID= ENSG00000033178.12 TPM= 1.06 Transcript Type= protein_coding
chr4	67662487	67701148	67662487	67701148	-	ENST00000429659.7@UBA6	ENST00000429659.7	protein_coding	67701049,67696645,67682119,67681563,67678439,67677611,67673697,67670470,67668551,67665189,67662487	67701148,67696707,67682213,67681591,67678533,67677722,67673777,67670592,67668674,67665292,67663947	Gene ID= ENSG00000033178.12 TPM= 4.25 Transcript Type= retained_intron
chr4	67701333	67722502	67701333	67722502	+	ENST00000506606.1@UBA6-AS1	ENST00000506606.1	antisense_RNA	67701333,67720422	67701484,67722502	Gene ID= ENSG00000248049.6 TPM= 2.12 Transcript Type= antisense_RNA
chr4	68310387	68350089	68310387	68350089	-	ENST00000344157.8@YTHDC1	ENST00000344157.8	protein_coding	68349726,68338283,68337572,68337027,68333308,68332794,68332103,68330202,68330002,68324139,68322749,68320123,68318826,68318690,68318519,68316314,68310387	68350089,68338384,68337900,68337450,68333397,68332847,68332197,68330310,68330119,68324223,68322915,68320205,68318862,68318729,68318581,68316448,68314323	Gene ID= ENSG00000083896.12 TPM= 1.06 Transcript Type= protein_coding
chr4	68313321	68350089	68313321	68350089	-	ENST00000355665.7@YTHDC1	ENST00000355665.7	protein_coding	68349726,68338283,68337572,68337027,68333308,68332103,68330202,68330002,68324139,68322749,68320123,68318826,68318690,68318519,68316314,68313321	68350089,68338384,68337900,68337450,68333397,68332197,68330310,68330119,68324223,68322915,68320205,68318862,68318729,68318581,68316448,68314323	Gene ID= ENSG00000083896.12 TPM= 5.31 Transcript Type= protein_coding
chr4	70688479	70690551	70688479	70690551	+	ENST00000254803.3@UTP3	ENST00000254803.3	protein_coding	70688479	70690551	Gene ID= ENSG00000132467.3 TPM= 3.19 Transcript Type= protein_coding
chr4	70703760	70705661	70703760	70705661	-	transcript1871.chr4.nnic@NA	transcript1871.chr4.nnic	NA	70703760	70705661	Gene ID= novel_gene_chr4_1872 TPM= 2.39 Transcript Type= NA
chr4	70704759	70806871	70704759	70806871	+	transcript1857.chr4.nic@RUFY3	transcript1857.chr4.nic	protein_coding	70704759,70762519,70763552,70764475,70768538,70773511,70775168,70778369,70783091,70784796,70788806,70789495,70793785,70794795,70800141,70802956,70804348,70806516	70705294,70762692,70763669,70764576,70768661,70773572,70775233,70778438,70783183,70784879,70788973,70789592,70793904,70794894,70800205,70802983,70804416,70806871	Gene ID= ENSG00000018189.12 TPM= 3.45 Transcript Type= NA
chr4	70704804	70806871	70704804	70806871	+	transcript1860.chr4.nic@RUFY3	transcript1860.chr4.nic	protein_coding	70704804,70762519,70763552,70764475,70768538,70773511,70775168,70778369,70783091,70784796,70788806,70789495,70800141,70802956,70804348,70806516	70705294,70762692,70763669,70764576,70768661,70773572,70775233,70778438,70783183,70784879,70788973,70789592,70800205,70802983,70804416,70806871	Gene ID= ENSG00000018189.12 TPM= 3.45 Transcript Type= NA
chr4	70721995	70807315	70721995	70807315	+	ENST00000381006.7@RUFY3	ENST00000381006.7	protein_coding	70721995,70762519,70763552,70764475,70768538,70773511,70775168,70778369,70783091,70784796,70788806,70789495,70793785,70794795,70800141,70802956,70804348,70806516	70722751,70762692,70763669,70764576,70768661,70773572,70775233,70778438,70783183,70784879,70788973,70789592,70793904,70794894,70800205,70802983,70804416,70807315	Gene ID= ENSG00000018189.12 TPM= 1.06 Transcript Type= protein_coding
chr4	70819758	70839503	70819758	70839503	-	ENST00000499044.6@GRSF1	ENST00000499044.6	protein_coding	70839228,70836158,70833118,70832307,70831539,70827852,70826124,70825296,70824294,70819758	70839503,70836314,70833273,70832450,70831674,70828036,70826245,70825431,70824368,70820861	Gene ID= ENSG00000132463.13 TPM= 5.84 Transcript Type= protein_coding
chr4	70820375	70839343	70820375	70839343	-	ENST00000514161.5@GRSF1	ENST00000514161.5	protein_coding	70839177,70836158,70833118,70832307,70831539,70827852,70826124,70825296,70824294,70820375	70839343,70836314,70833273,70832450,70831674,70828036,70826245,70825431,70824368,70820861	Gene ID= ENSG00000132463.13 TPM= 5.31 Transcript Type= protein_coding
chr4	70902347	70976743	70902347	70976743	+	ENST00000509041.5@MOB1B	ENST00000509041.5	protein_coding	70902347,70958874,70969931,70975153	70902550,70959040,70970024,70976743	Gene ID= ENSG00000173542.8 TPM= 3.19 Transcript Type= retained_intron
chr4	70993439	71030914	70993439	71030914	+	ENST00000286648.9@DCK	ENST00000286648.9	protein_coding	70993439,70998067,71022367,71023559,71025816,71026665,71029352	70993926,70998182,71022560,71023706,71025931,71026755,71030914	Gene ID= ENSG00000156136.9 TPM= 30.8 Transcript Type= protein_coding
chr4	70993563	71030914	70993563	71030914	+	ENST00000503359.5@DCK	ENST00000503359.5	protein_coding	70993563,70998067,71022367,71023559,71025816,71026665,71029352	70994017,70998182,71022560,71023706,71025931,71026755,71030914	Gene ID= ENSG00000156136.9 TPM= 1.06 Transcript Type= nonsense_mediated_decay
chr4	71186757	71569717	71186757	71569717	+	ENST00000264485.10@SLC4A4	ENST00000264485.10	protein_coding	71186757,71236576,71255220,71339370,71349912,71357008,71397577,71440616,71447646,71450389,71451188,71453495,71466444,71472699,71486948,71497501,71532062,71534227,71546350,71547648,71555140,71557712,71560093,71563793,71567004,71567788	71187401,71236649,71255399,71339505,71350072,71357187,71397653,71440773,71447733,71450543,71451301,71453669,71466577,71472970,71487018,71497692,71532175,71534388,71546528,71547720,71555208,71557885,71560254,71563889,71567083,71569717	Gene ID= ENSG00000080493.15 TPM= 4.25 Transcript Type= protein_coding
chr4	71186765	71473319	71186765	71473319	+	transcript1904.chr4.nic@SLC4A4	transcript1904.chr4.nic	protein_coding	71186765,71236576,71255220,71339370,71349912,71357008,71397577,71440616,71447646,71450389,71451188,71453495,71466444,71472699	71187401,71236649,71255399,71339505,71350072,71357187,71397653,71440773,71447733,71450543,71451301,71453669,71466577,71473319	Gene ID= ENSG00000080493.15 TPM= 2.12 Transcript Type= NA
chr4	71186765	71358329	71186765	71358329	+	transcript1909.chr4.nic@SLC4A4	transcript1909.chr4.nic	protein_coding	71186765,71236576,71255220,71339370,71349912,71357008	71187401,71236649,71255399,71339505,71350072,71358329	Gene ID= ENSG00000080493.15 TPM= 3.19 Transcript Type= NA
chr4	71339053	71572087	71339053	71572087	+	ENST00000340595.3@SLC4A4	ENST00000340595.3	protein_coding	71339053,71349912,71357008,71397577,71440616,71447646,71450389,71451188,71453495,71466444,71472699,71486948,71497501,71532062,71534227,71546350,71547648,71555140,71557712,71560093,71563793,71567004,71567788	71339505,71350072,71357187,71397653,71440773,71447733,71450543,71451301,71453669,71466577,71472970,71487018,71497692,71532175,71534388,71546528,71547720,71555208,71557885,71560254,71563889,71567083,71572087	Gene ID= ENSG00000080493.15 TPM= 6.37 Transcript Type= protein_coding
chr4	73056080	73069744	73056080	73069744	-	transcript1913.chr4.nnic@COX18	transcript1913.chr4.nnic	protein_coding	73069317,73068029,73065250,73064778,73061813,73057975,73056080	73069744,73068129,73065413,73064899,73061920,73058287,73057166	Gene ID= ENSG00000163626.16 TPM= 4.07 Transcript Type= NA
chr4	73102463	73223102	73102463	73223102	-	transcript1926.chr4.nnic@ANKRD17	transcript1926.chr4.nnic	protein_coding	73222974,73177380,73163302,73161192,73156019,73155631,73153880,73151430,73148813,73147241,73146764,73144745,73142640,73142242,73141741,73139531,73135117,73125201,73124913,73121617,73120881,73120162,73118688,73115821,73113792,73102463	73223102,73177533,73163432,73161348,73156166,73155778,73154113,73151524,73149050,73147432,73146873,73144832,73142767,73142385,73141843,73140283,73135265,73125312,73125058,73121759,73121094,73120337,73118850,73115916,73113908,73102547	Gene ID= ENSG00000132466.18 TPM= 6.99 Transcript Type= NA
chr4	73075686	73223114	73075686	73223114	-	ENST00000509867.6@ANKRD17	ENST00000509867.6	protein_coding	73222974,73177380,73161192,73156019,73155631,73153880,73151430,73148813,73147241,73146764,73144745,73142640,73142242,73141741,73139531,73135117,73125201,73124913,73121617,73120881,73120162,73118688,73115821,73113792,73102376,73098073,73097117,73094079,73090667,73085249,73078642,73077355,73076940,73075686	73223114,73177533,73161348,73156166,73155778,73154113,73151524,73149050,73147432,73146873,73144832,73142767,73142385,73141843,73140283,73135265,73125312,73125058,73121759,73121094,73120337,73118850,73115916,73113908,73102547,73098520,73097272,73094228,73092300,73085446,73078890,73077533,73077104,73076290	Gene ID= ENSG00000132466.18 TPM= 14.16 Transcript Type= protein_coding
chr4	73102463	73259106	73102463	73259106	-	transcript1929.chr4.nic@ANKRD17	transcript1929.chr4.nic	protein_coding	73258276,73177380,73161192,73156019,73155631,73153880,73151430,73148813,73147241,73146764,73144745,73142640,73142242,73141741,73139531,73135117,73125201,73124913,73121617,73120881,73120162,73118688,73115821,73113792,73102463	73259106,73177533,73161348,73156166,73155778,73154113,73151524,73149050,73147432,73146873,73144832,73142767,73142385,73141843,73140283,73135265,73125312,73125058,73121759,73121094,73120337,73118850,73115916,73113908,73102547	Gene ID= ENSG00000132466.18 TPM= 14.42 Transcript Type= NA
chr4	73102463	73223102	73102463	73223102	-	transcript1932.chr4.nic@ANKRD17	transcript1932.chr4.nic	protein_coding	73222974,73177380,73161192,73156019,73155631,73153880,73151430,73148813,73147241,73146764,73144745,73142640,73142242,73141741,73135117,73125201,73124913,73121617,73120881,73120162,73118688,73115821,73113792,73102463	73223102,73177533,73161348,73156166,73155778,73154113,73151524,73149050,73147432,73146873,73144832,73142767,73142385,73141843,73135265,73125312,73125058,73121759,73121094,73120337,73118850,73115916,73113908,73102547	Gene ID= ENSG00000132466.18 TPM= 4.51 Transcript Type= NA
chr4	73102463	73259106	73102463	73259106	-	transcript1933.chr4.nic@ANKRD17	transcript1933.chr4.nic	protein_coding	73258276,73177380,73161192,73156019,73155631,73153880,73151430,73148813,73147241,73146764,73144745,73142640,73142242,73141741,73135117,73125201,73124913,73121617,73120881,73120162,73118688,73115821,73113792,73102463	73259106,73177533,73161348,73156166,73155778,73154113,73151524,73149050,73147432,73146873,73144832,73142767,73142385,73141843,73135265,73125312,73125058,73121759,73121094,73120337,73118850,73115916,73113908,73102547	Gene ID= ENSG00000132466.18 TPM= 4.51 Transcript Type= NA
chr4	73102499	73258798	73102499	73258798	-	transcript1934.chr4.nnic@ANKRD17	transcript1934.chr4.nnic	protein_coding	73258276,73177380,73161192,73156019,73155631,73153880,73151430,73148813,73147241,73146764,73144745,73142640,73142242,73141741,73135117,73125201,73124913,73121617,73120881,73120162,73118688,73115821,73102499	73258798,73177533,73161348,73156166,73155778,73154113,73151524,73149050,73147432,73146873,73144832,73142767,73142385,73141843,73135265,73125312,73125058,73121759,73121094,73120337,73118850,73115916,73102547	Gene ID= ENSG00000132466.18 TPM= 2.12 Transcript Type= NA
chr4	73107337	73109312	73107337	73109312	+	transcript1940.chr4.nnic@NA	transcript1940.chr4.nnic	NA	73107337	73109312	Gene ID= novel_gene_chr4_1941 TPM= 5.31 Transcript Type= NA
chr4	73119461	73124299	73119461	73124299	+	transcript1942.chr4.nnic@NA	transcript1942.chr4.nnic	NA	73119461	73124299	Gene ID= novel_gene_chr4_1943 TPM= 3.19 Transcript Type= NA
chr4	73169115	73171372	73169115	73171372	-	transcript1944.chr4.nnic@NA	transcript1944.chr4.nnic	NA	73169115	73171372	Gene ID= novel_gene_chr4_1945 TPM= 3.19 Transcript Type= NA
chr4	73212464	73214866	73212464	73214866	+	transcript1938.chr4.nnic@NA	transcript1938.chr4.nnic	NA	73212464	73214866	Gene ID= novel_gene_chr4_1939 TPM= 8.5 Transcript Type= NA
chr4	73740506	73743716	73740506	73743716	+	ENST00000307407.7@CXCL8	ENST00000307407.7	protein_coding	73740506,73741542,73741949,73742449	73740722,73741677,73742032,73743716	Gene ID= ENSG00000169429.10 TPM= 2.12 Transcript Type= protein_coding
chr4	74097035	74099293	74097035	74099293	-	ENST00000508487.2@CXCL2	ENST00000508487.2	protein_coding	74099021,74098799,74098601,74097035	74099293,74098922,74098684,74097771	Gene ID= ENSG00000081041.8 TPM= 2.12 Transcript Type= protein_coding
chr4	74158136	74303092	74158136	74303092	+	transcript1948.chr4.nic@MTHFD2L	transcript1948.chr4.nic	protein_coding	74158136,74160055,74174506,74175281,74199794,74201263,74225302,74281425,74301697	74158281,74160088,74174690,74175403,74199946,74201370,74225394,74281550,74303092	Gene ID= ENSG00000163738.18 TPM= 3.19 Transcript Type= NA
chr4	74158112	74303092	74158112	74303092	+	ENST00000395759.6@MTHFD2L	ENST00000395759.6	protein_coding	74158112,74174506,74175281,74199794,74201263,74225302,74281425,74301697	74158281,74174690,74175403,74199946,74201370,74225394,74281550,74303092	Gene ID= ENSG00000163738.18 TPM= 5.31 Transcript Type= protein_coding
chr4	74158118	74162253	74158118	74162253	+	ENST00000461101.1@MTHFD2L	ENST00000461101.1	protein_coding	74158118,74160055	74158281,74162253	Gene ID= ENSG00000163738.18 TPM= 4.25 Transcript Type= processed_transcript
chr4	74158175	74162106	74158175	74162106	+	ENST00000484725.1@MTHFD2L	ENST00000484725.1	protein_coding	74158175,74160055,74161780	74158281,74160088,74162106	Gene ID= ENSG00000163738.18 TPM= 1.06 Transcript Type= processed_transcript
chr4	74445095	74449143	74445095	74449143	+	transcript1958.chr4.nic@AREG	transcript1958.chr4.nic	protein_coding	74445095,74446534,74449047	74445406,74446782,74449143	Gene ID= ENSG00000109321.10 TPM= 3.19 Transcript Type= NA
chr4	74445134	74455009	74445134	74455009	+	ENST00000395748.7@AREG	ENST00000395748.7	protein_coding	74445134,74446534,74449047,74450380,74452544,74454759	74445406,74446782,74449248,74450532,74452655,74455009	Gene ID= ENSG00000109321.10 TPM= 2.12 Transcript Type= protein_coding
chr4	74933060	75047464	74933060	75047464	+	transcript1960.chr4.nnic@PARM1	transcript1960.chr4.nnic	protein_coding	74933060,74940394,75012425,75033883,75046163	74933370,74940498,75013150,75033961,75047464	Gene ID= ENSG00000169116.11 TPM= 9.91 Transcript Type= NA
chr4	74933116	75050113	74933116	75050113	+	ENST00000307428.7@PARM1	ENST00000307428.7	protein_coding	74933116,75012425,75033883,75046163	74933370,75013150,75033961,75050113	Gene ID= ENSG00000169116.11 TPM= 67.27 Transcript Type= protein_coding
chr4	74933095	75050115	74933095	75050115	+	ENST00000513238.5@PARM1	ENST00000513238.5	protein_coding	74933095,75033883,75046163	74933370,75033961,75050115	Gene ID= ENSG00000169116.11 TPM= 18.41 Transcript Type= protein_coding
chr4	75479037	75514685	75479037	75514685	-	ENST00000324439.9@RCHY1	ENST00000324439.9	protein_coding	75514197,75509177,75508820,75494101,75491889,75491724,75491611,75490581,75479037	75514685,75509296,75508935,75494179,75491933,75491782,75491637,75490701,75482666	Gene ID= ENSG00000163743.13 TPM= 7.44 Transcript Type= protein_coding
chr4	75482008	75514312	75482008	75514312	-	ENST00000505105.5@RCHY1	ENST00000505105.5	protein_coding	75514197,75509177,75508820,75494101,75491889,75491724,75491611,75490581,75482008	75514312,75509296,75508935,75494179,75491933,75491782,75491637,75490663,75482666	Gene ID= ENSG00000163743.13 TPM= 1.06 Transcript Type= nonsense_mediated_decay
chr4	75514473	75530026	75514473	75530026	+	ENST00000311638.7@THAP6	ENST00000311638.7	protein_coding	75514473,75515433,75516772,75521736,75526960	75514520,75515532,75516979,75521861,75530026	Gene ID= ENSG00000174796.12 TPM= 9.56 Transcript Type= protein_coding
chr4	75644389	75724438	75644389	75724438	-	transcript2019.chr4.nic@G3BP2	transcript2019.chr4.nic	protein_coding	75724276,75724056,75661931,75658843,75657557,75656924,75655768,75655066,75653983,75648639,75647029,75646338,75644389	75724438,75724176,75662049,75658924,75657730,75657014,75655870,75655246,75654081,75648741,75647157,75646456,75645702	Gene ID= ENSG00000138757.14 TPM= 2.12 Transcript Type= NA
chr4	75642782	75673969	75642782	75673969	-	ENST00000359707.8@G3BP2	ENST00000359707.8	protein_coding	75673208,75661931,75658843,75657557,75656924,75655768,75655066,75653983,75648639,75647029,75646338,75642782	75673969,75662049,75658924,75657730,75657014,75655870,75655246,75654081,75648741,75647157,75646456,75645702	Gene ID= ENSG00000138757.14 TPM= 18.59 Transcript Type= protein_coding
chr4	75642782	75673118	75642782	75673118	-	transcript2024.chr4.nic@G3BP2	transcript2024.chr4.nic	protein_coding	75673019,75661931,75658843,75657557,75656924,75655768,75655066,75648639,75647029,75646338,75642782	75673118,75662049,75658924,75657730,75657014,75655870,75655246,75648741,75647157,75646456,75645702	Gene ID= ENSG00000138757.14 TPM= 4.25 Transcript Type= NA
chr4	75642782	75724437	75642782	75724437	-	transcript2026.chr4.nic@G3BP2	transcript2026.chr4.nic	protein_coding	75724276,75661931,75658843,75657557,75656924,75655768,75655066,75648639,75647029,75646338,75642782	75724437,75662049,75658924,75657730,75657014,75655870,75655246,75648741,75647157,75646456,75645702	Gene ID= ENSG00000138757.14 TPM= 6.37 Transcript Type= NA
chr4	75644389	75673401	75644389	75673401	-	ENST00000357854.7@G3BP2	ENST00000357854.7	protein_coding	75673208,75661931,75658843,75657557,75656924,75655768,75655066,75648639,75647029,75646338,75644389	75673401,75662049,75658924,75657730,75657014,75655870,75655246,75648741,75647157,75646456,75645702	Gene ID= ENSG00000138757.14 TPM= 5.84 Transcript Type= protein_coding
chr4	75724514	75801125	75724514	75801125	+	transcript2015.chr4.nic@USO1	transcript2015.chr4.nic	protein_coding	75724514,75752373,75752540,75757497,75760594,75770439,75770822,75771082,75774676,75782680,75787062,75790150,75790643,75793690,75795336,75799622,75800351,75800618,75801079	75724885,75752459,75752604,75757573,75760605,75770539,75770924,75771137,75774796,75782858,75787202,75790238,75790797,75793901,75795356,75799732,75800469,75800799,75801125	Gene ID= ENSG00000138768.14 TPM= 22.31 Transcript Type= NA
chr4	75724593	75814213	75724593	75814213	+	ENST00000514213.6@USO1	ENST00000514213.6	protein_coding	75724593,75752373,75752540,75757497,75770439,75770822,75771082,75774676,75782680,75787062,75790150,75790643,75793690,75799622,75800351,75800618,75801079,75804134,75805140,75806486,75808953,75810432,75812160,75813206	75724885,75752459,75752604,75757573,75770539,75770924,75771137,75774796,75782858,75787202,75790238,75790797,75793901,75799732,75800469,75800799,75801200,75804272,75805303,75806572,75809051,75810539,75812375,75814213	Gene ID= ENSG00000138768.14 TPM= 33.99 Transcript Type= protein_coding
chr4	75913657	75941051	75913657	75941051	-	ENST00000286733.8@NAAA	ENST00000286733.8	protein_coding	75940744,75940001,75936109,75931214,75925735,75920951,75920738,75919909,75918761,75914868,75913657	75941051,75940165,75936235,75931304,75925811,75921123,75920800,75919975,75918789,75914985,75914338	Gene ID= ENSG00000138744.14 TPM= 9.56 Transcript Type= protein_coding
chr4	75913660	75941011	75913660	75941011	-	transcript2038.chr4.nnic@NAAA	transcript2038.chr4.nnic	protein_coding	75940744,75940001,75936109,75931214,75925735,75920951,75920738,75919909,75918761,75913660	75941011,75940165,75936235,75931304,75925811,75921123,75920800,75919975,75918789,75914338	Gene ID= ENSG00000138744.14 TPM= 4.25 Transcript Type= NA
chr4	75917467	75940973	75917467	75940973	-	ENST00000507956.5@NAAA	ENST00000507956.5	protein_coding	75940744,75940001,75936109,75931214,75925735,75920951,75920738,75919909,75917467	75940973,75940165,75936235,75931304,75925811,75921123,75920800,75919975,75917773	Gene ID= ENSG00000138744.14 TPM= 3.19 Transcript Type= protein_coding
chr4	75934891	75940983	75934891	75940983	-	ENST00000507187.2@NAAA	ENST00000507187.2	protein_coding	75940744,75940001,75934891	75940983,75940165,75936235	Gene ID= ENSG00000138744.14 TPM= 6.37 Transcript Type= protein_coding
chr4	75956070	75990939	75956070	75990939	-	transcript2051.chr4.nic@SDAD1	transcript2051.chr4.nic	protein_coding	75990752,75981933,75981372,75977646,75975924,75975744,75974076,75973317,75971357,75970309,75969296,75967277,75965764,75964135,75961211,75961028,75960066,75957847,75957518,75957325,75956070	75990939,75982037,75981470,75977756,75975995,75975844,75974133,75973391,75971458,75970378,75969399,75967334,75965822,75964211,75961308,75961104,75960192,75957941,75957708,75957409,75956136	Gene ID= ENSG00000198301.11 TPM= 4.25 Transcript Type= NA
chr4	75971385	75990944	75971385	75990944	-	transcript2053.chr4.nic@SDAD1	transcript2053.chr4.nic	protein_coding	75990752,75981933,75981372,75977646,75975924,75975744,75974076,75973317,75971385	75990944,75982037,75981545,75977756,75975995,75975844,75974133,75973391,75971458	Gene ID= ENSG00000198301.11 TPM= 2.12 Transcript Type= NA
chr4	75949916	75990960	75949916	75990960	-	ENST00000356260.9@SDAD1	ENST00000356260.9	protein_coding	75990752,75981933,75981372,75977646,75975924,75975744,75974076,75973317,75971357,75970309,75969296,75967277,75965764,75964135,75961211,75961028,75960066,75957847,75957518,75957325,75955975,75949916	75990960,75982037,75981470,75977756,75975995,75975844,75974133,75973391,75971458,75970378,75969399,75967334,75965822,75964211,75961308,75961104,75960192,75957941,75957708,75957409,75956136,75950797	Gene ID= ENSG00000198301.11 TPM= 11.68 Transcript Type= protein_coding
chr4	75988815	75990940	75988815	75990940	-	transcript2056.chr4.nnic@NA	transcript2056.chr4.nnic	NA	75988815	75990940	Gene ID= novel_gene_chr4_2057 TPM= 2.12 Transcript Type= NA
chr4	76021117	76023497	76021117	76023497	-	ENST00000306602.2@CXCL10	ENST00000306602.2	protein_coding	76023371,76022691,76022366,76021117	76023497,76022817,76022455,76021948	Gene ID= ENSG00000169245.5 TPM= 3.19 Transcript Type= protein_coding
chr4	76074649	76112786	76074649	76112786	+	transcript2059.chr4.nnic@ART3	transcript2059.chr4.nnic	protein_coding	76074649,76075881,76081824,76097644,76098955,76100291,76100795,76100990,76103937,76104597,76112386	76074819,76075958,76082535,76097676,76098987,76100320,76100824,76101019,76103969,76104629,76112786	Gene ID= ENSG00000156219.16 TPM= 5.66 Transcript Type= NA
chr4	76074710	76112802	76074710	76112802	+	transcript2060.chr4.nic@ART3	transcript2060.chr4.nic	protein_coding	76074710,76075881,76081824,76097644,76098955,76100291,76100795,76100990,76103937,76112386	76074819,76075958,76082535,76097676,76098987,76100320,76100824,76101019,76103969,76112802	Gene ID= ENSG00000156219.16 TPM= 21.59 Transcript Type= NA
chr4	76074649	76112786	76074649	76112786	+	transcript2063.chr4.nnic@ART3	transcript2063.chr4.nnic	protein_coding	76074649,76075881,76081824,76097644,76098955,76100291,76100795,76100990,76112386	76074819,76075958,76082535,76097676,76098987,76100320,76100824,76101019,76112786	Gene ID= ENSG00000156219.16 TPM= 5.66 Transcript Type= NA
chr4	76114664	76148515	76114664	76148515	-	ENST00000264883.7@NUP54	ENST00000264883.7	protein_coding	76148308,76144390,76144149,76136186,76134175,76132523,76131230,76130656,76124649,76118075,76117664,76114664	76148515,76144473,76144292,76136412,76134362,76132719,76131284,76130749,76124756,76118194,76117774,76115494	Gene ID= ENSG00000138750.14 TPM= 7.44 Transcript Type= protein_coding
chr4	76158733	76213918	76158733	76213918	-	ENST00000264896.7@SCARB2	ENST00000264896.7	protein_coding	76213427,76195707,76180954,76179517,76176437,76175791,76174144,76169867,76168403,76166250,76163225,76158733	76213918,76195864,76181101,76179705,76176528,76175910,76174313,76169985,76168476,76166301,76163383,76161751	Gene ID= ENSG00000138760.9 TPM= 24.43 Transcript Type= protein_coding
chr4	76251724	76283780	76251724	76283780	+	transcript2082.chr4.nic@FAM47E	transcript2082.chr4.nic	protein_coding	76251724,76256178,76263704,76268660,76271568,76278069,76280264,76283381	76251820,76256523,76263843,76268813,76271768,76278224,76280341,76283780	Gene ID= ENSG00000189157.13 TPM= 2.12 Transcript Type= NA
chr4	76251741	76283754	76251741	76283754	+	ENST00000424749.6@FAM47E	ENST00000424749.6	protein_coding	76251741,76256178,76263704,76268660,76271568,76278069,76280264,76283381	76251820,76256523,76263843,76268768,76271768,76278224,76280341,76283754	Gene ID= ENSG00000189157.13 TPM= 1.06 Transcript Type= protein_coding
chr4	76306026	76311599	76306026	76311599	+	ENST00000237642.6@STBD1	ENST00000237642.6	protein_coding	76306026,76309144	76306989,76311599	Gene ID= ENSG00000118804.8 TPM= 225.18 Transcript Type= protein_coding
chr4	76313002	76407305	76313002	76407305	-	ENST00000388914.7@CCDC158	ENST00000388914.7	protein_coding	76407222,76403138,76396269,76384556,76384088,76383662,76382610,76379290,76371417,76369426,76367294,76362126,76357374,76355324,76353123,76351720,76350996,76334022,76332432,76331344,76328900,76325857,76323302,76313002	76407305,76403276,76396486,76384665,76384415,76383738,76382720,76379404,76371536,76369623,76367776,76362315,76357526,76355436,76353281,76351812,76351121,76334167,76332491,76331403,76328967,76326015,76323409,76313246	Gene ID= ENSG00000163749.17 TPM= 1.06 Transcript Type= protein_coding
chr4	76946421	76949638	76946421	76949638	-	transcript2113.chr4.nnic@NA	transcript2113.chr4.nnic	NA	76946421	76949638	Gene ID= novel_gene_chr4_2114 TPM= 5.31 Transcript Type= NA
chr4	76949703	77038614	76949703	77038614	+	ENST00000264893.10@SEPT11	ENST00000264893.10	protein_coding	76949703,76996425,77005601,77011735,77014856,77019165,77020502,77028629,77030783,77034497	76949930,76996539,77005796,77011921,77015017,77019261,77020670,77028761,77030970,77038614	Gene ID= ENSG00000138758.11 TPM= 22.31 Transcript Type= protein_coding
chr4	76949791	77040166	76949791	77040166	+	transcript2100.chr4.nic@SEPT11	transcript2100.chr4.nic	protein_coding	76949791,76996425,77005601,77011735,77014856,77019165,77020502,77028629,77030783,77039073	76949930,76996539,77005796,77011921,77015017,77019261,77020670,77028761,77030970,77040166	Gene ID= ENSG00000138758.11 TPM= 2.12 Transcript Type= NA
chr4	76949702	77040151	76949702	77040151	+	transcript2101.chr4.nic@SEPT11	transcript2101.chr4.nic	protein_coding	76949702,76996425,77005601,77011735,77014856,77019165,77020502,77028629,77030783,77039743	76949930,76996539,77005796,77011921,77015017,77019261,77020670,77028761,77030970,77040151	Gene ID= ENSG00000138758.11 TPM= 2.12 Transcript Type= NA
chr4	76949751	77032158	76949751	77032158	+	ENST00000502584.5@SEPT11	ENST00000502584.5	protein_coding	76949751,76996425,77005601,77011735,77014856,77019165,77020502,77028629,77030783	76949930,76996539,77005796,77011921,77015017,77019261,77020670,77028761,77032158	Gene ID= ENSG00000138758.11 TPM= 2.12 Transcript Type= protein_coding
chr4	76959255	76962237	76959255	76962237	-	transcript2115.chr4.nnic@NA	transcript2115.chr4.nnic	NA	76959255	76962237	Gene ID= novel_gene_chr4_2116 TPM= 2.12 Transcript Type= NA
chr4	77047158	77076005	77047158	77076005	-	ENST00000237654.8@CCNI	ENST00000237654.8	protein_coding	77075472,77066249,77058507,77056249,77055962,77055150,77047158	77076005,77066405,77058635,77056323,77056102,77055380,77048662	Gene ID= ENSG00000118816.9 TPM= 535.33 Transcript Type= protein_coding
chr4	77157151	77170059	77157151	77170059	+	ENST00000316355.9@CCNG2	ENST00000316355.9	protein_coding	77157151,77158533,77159367,77160721,77161480,77161649,77164274,77165801	77157506,77158670,77159504,77160971,77161558,77161747,77164479,77170059	Gene ID= ENSG00000138764.14 TPM= 2.12 Transcript Type= protein_coding
chr4	77742203	77819366	77742203	77819366	-	ENST00000506166.1@CNOT6L	ENST00000506166.1	protein_coding	77819233,77776271,77774530,77773081,77756862,77748316,77742203	77819366,77776392,77774716,77773166,77756951,77748384,77742295	Gene ID= ENSG00000138767.12 TPM= 1.06 Transcript Type= processed_transcript
chr4	77862837	77883296	77862837	77883296	+	transcript2150.chr4.nic@MRPL1	transcript2150.chr4.nic	protein_coding	77862837,77871744,77883242	77862879,77871855,77883296	Gene ID= ENSG00000169288.17 TPM= 2.12 Transcript Type= NA
chr4	77896151	77899353	77896151	77899353	-	transcript2152.chr4.nnic@NA	transcript2152.chr4.nnic	NA	77896151	77899353	Gene ID= novel_gene_chr4_2153 TPM= 2.12 Transcript Type= NA
chr4	78057570	78544269	78057570	78544269	+	ENST00000512123.3@FRAS1	ENST00000512123.3	protein_coding	78057570,78065985,78237510,78245233,78252392,78255242,78265025,78266834,78267241,78278655,78281398,78282820,78284405,78286405,78308066,78315594,78317368,78318810,78333272,78337674,78363513,78363908,78369838,78372718,78374111,78375739,78379726,78384059,78387375,78400734,78407663,78412969,78418949,78421863,78424388,78429095,78430292,78432357,78438570,78438902,78441162,78445522,78446727,78448053,78450151,78451772,78452175,78464021,78464443,78466208,78469978,78472180,78473438,78475438,78477815,78479374,78481804,78482388,78488875,78496805,78499721,78507421,78508731,78511274,78513392,78515799,78519331,78521523,78522649,78526541,78534449,78536995,78539294,78540531	78058085,78066016,78237617,78245325,78252551,78255375,78265108,78266935,78267432,78278744,78281433,78282967,78284548,78286539,78308209,78315734,78317508,78318986,78333412,78337817,78363665,78364054,78369984,78372858,78374251,78375879,78379996,78384143,78387701,78400887,78407841,78413085,78419063,78422000,78424420,78429226,78430417,78432604,78438718,78439064,78441297,78445712,78446880,78448316,78450339,78451891,78452354,78464145,78464583,78466435,78470091,78472330,78473597,78475606,78478061,78479718,78481964,78482535,78489080,78496961,78499921,78507608,78509006,78511506,78513552,78516013,78519481,78521630,78522808,78526657,78534615,78537200,78539440,78544269	Gene ID= ENSG00000138759.18 TPM= 4.25 Transcript Type= protein_coding
chr4	78551519	78610421	78551519	78610421	+	ENST00000264908.10@ANXA3	ENST00000264908.10	protein_coding	78551519,78554436,78573180,78579027,78582177,78586260,78591544,78595381,78595794,78597319,78601510,78604277,78610056	78551859,78554488,78573267,78579121,78582290,78586350,78591623,78595437,78595887,78597414,78601568,78604399,78610421	Gene ID= ENSG00000138772.12 TPM= 5.31 Transcript Type= protein_coding
chr4	78809688	78813526	78809688	78813526	-	transcript2180.chr4.nnic@NA	transcript2180.chr4.nnic	NA	78809688	78813526	Gene ID= novel_gene_chr4_2181 TPM= 3.19 Transcript Type= NA
chr4	78911878	78939438	78911878	78939438	-	ENST00000512733.5@PAQR3	ENST00000512733.5	protein_coding	78939040,78935121,78930170,78926521,78923857,78911878	78939438,78935283,78930325,78926718,78923947,78920681	Gene ID= ENSG00000163291.14 TPM= 7.44 Transcript Type= protein_coding
chr4	78917940	78939403	78917940	78939403	-	ENST00000395594.2@PAQR3	ENST00000395594.2	protein_coding	78939040,78935121,78930170,78926521,78923857,78922141,78917940	78939403,78935283,78930325,78926718,78923947,78922421,78920681	Gene ID= ENSG00000163291.14 TPM= 2.12 Transcript Type= nonsense_mediated_decay
chr4	78901232	78906416	78901232	78906416	-	transcript2184.chr4.nnic@NA	transcript2184.chr4.nnic	NA	78901232	78906416	Gene ID= novel_gene_chr4_2185 TPM= 2.12 Transcript Type= NA
chr4	79905571	80073242	79905571	80073242	-	transcript2189.chr4.nic@ANTXR2	transcript2189.chr4.nic	protein_coding	80072409,80071583,80069436,80055932,80055360,80055150,80054272,80035972,80033472,80031623,80018898,80008521,79984819,79983878,79978007,79977621,79907405,79905571	80073242,80071654,80069507,80056013,80055467,80055218,80054352,80036032,80033570,80031692,80018976,80008616,79984863,79983970,79978174,79977701,79907467,79906172	Gene ID= ENSG00000163297.16 TPM= 6.37 Transcript Type= NA
chr4	82353829	82373990	82353829	82373990	-	transcript2216.chr4.nic@HNRNPD	transcript2216.chr4.nic	protein_coding	82373446,82371528,82359471,82358659,82357313,82356796,82356537,82353829	82373990,82371584,82359639,82358820,82357444,82356895,82356683,82355401	Gene ID= ENSG00000138668.18 TPM= 6.37 Transcript Type= NA
chr4	82353829	82374002	82353829	82374002	-	transcript2221.chr4.nic@HNRNPD	transcript2221.chr4.nic	protein_coding	82373446,82359471,82358659,82357313,82356796,82355304,82353829	82374002,82359639,82358820,82357444,82356895,82355401,82354154	Gene ID= ENSG00000138668.18 TPM= 15.93 Transcript Type= NA
chr4	82352498	82373956	82352498	82373956	-	ENST00000313899.11@HNRNPD	ENST00000313899.11	protein_coding	82373446,82371528,82359471,82358659,82357313,82356796,82356537,82355304,82352498	82373956,82371584,82359639,82358820,82357444,82356895,82356683,82355401,82354154	Gene ID= ENSG00000138668.18 TPM= 3.19 Transcript Type= protein_coding
chr4	82353829	82373986	82353829	82373986	-	ENST00000353341.8@HNRNPD	ENST00000353341.8	protein_coding	82373446,82371528,82359471,82358659,82357313,82356796,82355304,82353829	82373986,82371584,82359639,82358820,82357444,82356895,82355401,82354154	Gene ID= ENSG00000138668.18 TPM= 87.1 Transcript Type= protein_coding
chr4	82353834	82373983	82353834	82373983	-	ENST00000352301.8@HNRNPD	ENST00000352301.8	protein_coding	82373446,82359471,82358659,82357313,82356796,82356537,82355304,82353834	82373983,82359639,82358820,82357444,82356895,82356683,82355401,82354154	Gene ID= ENSG00000138668.18 TPM= 32.93 Transcript Type= protein_coding
chr4	82374402	82384027	82374402	82384027	+	ENST00000609575.1@AC124016.1	ENST00000609575.1	antisense_RNA	82374402,82383734	82374726,82384027	Gene ID= ENSG00000272677.1 TPM= 1.06 Transcript Type= antisense_RNA
chr4	82374301	82374912	82374301	82374912	+	ENST00000609552.1@AC124016.1	ENST00000609552.1	antisense_RNA	82374301	82374912	Gene ID= ENSG00000272677.1 TPM= 1.06 Transcript Type= antisense_RNA
chr4	82424629	82429441	82424629	82429441	-	ENST00000602300.5@HNRNPDL	ENST00000602300.5	protein_coding	82429248,82428278,82428018,82427433,82427190,82426463,82426037,82424629	82429441,82428446,82428179,82427564,82427304,82426633,82426129,82424883	Gene ID= ENSG00000152795.17 TPM= 109.4 Transcript Type= protein_coding
chr4	82424625	82429397	82424625	82429397	-	ENST00000507721.5@HNRNPDL	ENST00000507721.5	protein_coding	82429248,82428278,82428018,82427433,82427190,82426463,82424625	82429397,82428446,82428179,82427564,82427304,82426633,82426129	Gene ID= ENSG00000152795.17 TPM= 35.05 Transcript Type= protein_coding
chr4	82430562	82461091	82430562	82461091	+	ENST00000273920.7@ENOPH1	ENST00000273920.7	protein_coding	82430562,82447920,82451043,82454722,82456915,82459981	82430913,82448021,82451245,82454854,82457038,82461091	Gene ID= ENSG00000145293.15 TPM= 83.91 Transcript Type= protein_coding
chr4	82430662	82461087	82430662	82461087	+	ENST00000505846.5@ENOPH1	ENST00000505846.5	protein_coding	82430662,82447920,82454722,82456915,82459981	82430884,82448021,82454854,82457038,82461087	Gene ID= ENSG00000145293.15 TPM= 1.06 Transcript Type= protein_coding
chr4	82483170	82562357	82483170	82562357	-	ENST00000515780.6@TMEM150C	ENST00000515780.6	protein_coding	82562163,82504578,82503059,82502895,82502727,82496068,82490061,82483170	82562357,82504667,82503112,82502927,82502794,82496195,82490238,82485719	Gene ID= ENSG00000249242.7 TPM= 3.19 Transcript Type= protein_coding
chr4	82818661	82891248	82818661	82891248	-	transcript2262.chr4.nic@SEC31A	transcript2262.chr4.nic	protein_coding	82891088,82881858,82880799,82878730,82875727,82874611,82871944,82870325,82867155,82866808,82864362,82863318,82862534,82857689,82856952,82854903,82853570,82851431,82848804,82844386,82842185,82829000,82827369,82824555,82821037,82818661	82891248,82881940,82880922,82878928,82875822,82874751,82872086,82870424,82867316,82866960,82864598,82863392,82862572,82857764,82857130,82855029,82853715,82851604,82848977,82844509,82842481,82829058,82827632,82824674,82821108,82819253	Gene ID= ENSG00000138674.16 TPM= 18.53 Transcript Type= NA
chr4	82818662	82891259	82818662	82891259	-	ENST00000311785.11@SEC31A	ENST00000311785.11	protein_coding	82891088,82881858,82880799,82878730,82875727,82874611,82871944,82870325,82867155,82866808,82864362,82863318,82862534,82861631,82857689,82856952,82854903,82853570,82851431,82848804,82844386,82829000,82827369,82824555,82821037,82818662	82891259,82881940,82880922,82878928,82875822,82874751,82872086,82870424,82867316,82866960,82864598,82863392,82862572,82861708,82857764,82857130,82855029,82853715,82851604,82848977,82844509,82829058,82827632,82824674,82821108,82819253	Gene ID= ENSG00000138674.16 TPM= 10.83 Transcript Type= protein_coding
chr4	82818661	82891248	82818661	82891248	-	transcript2267.chr4.nic@SEC31A	transcript2267.chr4.nic	protein_coding	82891088,82881858,82880799,82878730,82875727,82874611,82871944,82870325,82867155,82866808,82864362,82863318,82862534,82857689,82856952,82854903,82853570,82851431,82848804,82844386,82829000,82827369,82824555,82821037,82818661	82891248,82881940,82880922,82878928,82875822,82874751,82872086,82870424,82867316,82866960,82864598,82863392,82862572,82857764,82857130,82855029,82853715,82851604,82848977,82844509,82829058,82827632,82824674,82821108,82819253	Gene ID= ENSG00000138674.16 TPM= 5.79 Transcript Type= NA
chr4	82818661	82891153	82818661	82891153	-	ENST00000513858.5@SEC31A	ENST00000513858.5	protein_coding	82891088,82881858,82880799,82878730,82875727,82874611,82871944,82870325,82867155,82866808,82864362,82863318,82857689,82856952,82854903,82853570,82851431,82848804,82844386,82829000,82827369,82824555,82821037,82818661	82891153,82881940,82880922,82878928,82875822,82874751,82872086,82870424,82867316,82866960,82864598,82863392,82857764,82857130,82855029,82853715,82851604,82848977,82844509,82829058,82827632,82824674,82821108,82819253	Gene ID= ENSG00000138674.16 TPM= 3.88 Transcript Type= protein_coding
chr4	82818661	82891136	82818661	82891136	-	ENST00000348405.8@SEC31A	ENST00000348405.8	protein_coding	82891088,82881858,82880799,82878730,82875727,82874611,82871944,82870325,82867155,82866808,82864362,82863318,82857689,82856952,82854903,82853570,82851431,82848804,82844386,82842140,82829000,82827369,82824555,82821037,82818661	82891136,82881940,82880922,82878928,82875822,82874751,82872086,82870424,82867316,82866960,82864598,82863392,82857764,82857130,82855029,82853715,82851604,82848977,82844509,82842481,82829058,82827632,82824674,82821108,82819253	Gene ID= ENSG00000138674.16 TPM= 12.37 Transcript Type= protein_coding
chr4	82863211	82891184	82863211	82891184	-	ENST00000436790.6@SEC31A	ENST00000436790.6	protein_coding	82891088,82881858,82880799,82878730,82875727,82874611,82871944,82870325,82867155,82866808,82864362,82863211	82891184,82881940,82880922,82878928,82875822,82874751,82872086,82870424,82867316,82866960,82864598,82863392	Gene ID= ENSG00000138674.16 TPM= 7.44 Transcript Type= processed_transcript
chr4	82822330	82824273	82822330	82824273	+	transcript2290.chr4.nnic@NA	transcript2290.chr4.nnic	NA	82822330	82824273	Gene ID= novel_gene_chr4_2291 TPM= 2.12 Transcript Type= NA
chr4	82843835	82844893	82843835	82844893	+	transcript2288.chr4.nnic@NA	transcript2288.chr4.nnic	NA	82843835	82844893	Gene ID= novel_gene_chr4_2289 TPM= 2.12 Transcript Type= NA
chr4	82893009	82900960	82893009	82900960	-	ENST00000504520.6@THAP9-AS1	ENST00000504520.6	antisense_RNA	82900334,82900077,82897989,82895692,82893009	82900960,82900223,82898062,82895774,82894847	Gene ID= ENSG00000251022.6 TPM= 9.56 Transcript Type= antisense_RNA
chr4	82893537	82900545	82893537	82900545	-	transcript2300.chr4.nnic@THAP9-AS1	transcript2300.chr4.nnic	antisense_RNA	82900334,82900077,82897989,82893537	82900545,82900223,82898062,82894847	Gene ID= ENSG00000251022.6 TPM= 2.12 Transcript Type= NA
chr4	82900752	82919969	82900752	82919969	+	ENST00000302236.9@THAP9	ENST00000302236.9	protein_coding	82900752,82904736,82906324,82907785,82916944	82900882,82904931,82906627,82907935,82919969	Gene ID= ENSG00000168152.12 TPM= 4.25 Transcript Type= protein_coding
chr4	83034447	83075789	83034447	83075789	+	ENST00000509093.5@COPS4	ENST00000509093.5	protein_coding	83034447,83045626,83049166,83049881,83056926,83057258,83063076,83066438,83075297	83035298,83045705,83049317,83049984,83057079,83057408,83063246,83066553,83075789	Gene ID= ENSG00000138663.8 TPM= 5.31 Transcript Type= protein_coding
chr4	83035090	83075818	83035090	83075818	+	ENST00000264389.6@COPS4	ENST00000264389.6	protein_coding	83035090,83045626,83049166,83049881,83056926,83057258,83063076,83066438,83068438,83075297	83035298,83045705,83049317,83049984,83057079,83057408,83063246,83066553,83068522,83075818	Gene ID= ENSG00000138663.8 TPM= 120.02 Transcript Type= protein_coding
chr4	83035225	83075756	83035225	83075756	+	ENST00000511653.1@COPS4	ENST00000511653.1	protein_coding	83035225,83045626,83049166,83049881,83056926,83057258,83063076,83066438,83068438,83073206,83075297	83035298,83045705,83049317,83049984,83057079,83057408,83063246,83066553,83068522,83073353,83075756	Gene ID= ENSG00000138663.8 TPM= 13.81 Transcript Type= protein_coding
chr4	83263824	83284914	83263824	83284914	-	ENST00000311469.8@COQ2	ENST00000311469.8	protein_coding	83284512,83278948,83273496,83272087,83269860,83267586,83263824	83284914,83279114,83273617,83272172,83269993,83267774,83264363	Gene ID= ENSG00000173085.13 TPM= 22.31 Transcript Type= protein_coding
chr4	83407343	83455856	83407343	83455856	-	ENST00000295488.7@HELQ	ENST00000295488.7	protein_coding	83455397,83453231,83448783,83446835,83446014,83443517,83441305,83439863,83436858,83432126,83431664,83429524,83427563,83425994,83421563,83418093,83416731,83407343	83455856,83453945,83448961,83447035,83446086,83443614,83441403,83440008,83437097,83432267,83431768,83429746,83427720,83426092,83421736,83418206,83416865,83407560	Gene ID= ENSG00000163312.10 TPM= 2.12 Transcript Type= protein_coding
chr4	83455965	83462298	83455965	83462298	+	ENST00000295491.8@MRPS18C	ENST00000295491.8	protein_coding	83455965,83456909,83458346,83459740,83460973,83461121	83456177,83456958,83458429,83459797,83461032,83462298	Gene ID= ENSG00000163319.10 TPM= 28.68 Transcript Type= protein_coding
chr4	83455983	83461423	83455983	83461423	+	ENST00000507019.5@MRPS18C	ENST00000507019.5	protein_coding	83455983,83456909,83459740,83460973,83461121	83456177,83456958,83459797,83461032,83461423	Gene ID= ENSG00000163319.10 TPM= 2.12 Transcript Type= protein_coding
chr4	83456055	83461237	83456055	83461237	+	ENST00000507349.5@MRPS18C	ENST00000507349.5	protein_coding	83456055,83456909,83460973,83461121	83456177,83456958,83461032,83461237	Gene ID= ENSG00000163319.10 TPM= 1.06 Transcript Type= protein_coding
chr4	83455932	83459144	83455932	83459144	+	ENST00000512375.1@MRPS18C	ENST00000512375.1	protein_coding	83455932,83456909	83456177,83459144	Gene ID= ENSG00000163319.10 TPM= 1.06 Transcript Type= retained_intron
chr4	83459517	83485181	83459517	83485181	-	ENST00000321945.11@ABRAXAS1	ENST00000321945.11	protein_coding	83484986,83482154,83476643,83472222,83470203,83469032,83467454,83463494,83459517	83485181,83482244,83476679,83472288,83470396,83469151,83467538,83463608,83462902	Gene ID= ENSG00000163322.13 TPM= 1.06 Transcript Type= protein_coding
chr4	83460945	83485086	83460945	83485086	-	transcript2329.chr4.nnic@ABRAXAS1	transcript2329.chr4.nnic	protein_coding	83484986,83482154,83476643,83469032,83467454,83463494,83460945	83485086,83482244,83476679,83469151,83467538,83463608,83462902	Gene ID= ENSG00000163322.13 TPM= 3.19 Transcript Type= NA
chr4	83536042	83605875	83536042	83605875	+	transcript2346.chr4.nic@GPAT3	transcript2346.chr4.nic	protein_coding	83536042,83536504,83544536,83581562,83587255,83588210,83590199,83594845,83596858,83597430,83598051,83598644,83604668	83536355,83536763,83544602,83581832,83587329,83588299,83590292,83594960,83596913,83597515,83598179,83598723,83605875	Gene ID= ENSG00000138678.10 TPM= 11.15 Transcript Type= NA
chr4	83536108	83605875	83536108	83605875	+	ENST00000395226.6@GPAT3	ENST00000395226.6	protein_coding	83536108,83536504,83544536,83581562,83587255,83588210,83590199,83594845,83596858,83597430,83598051,83598644,83604668	83536206,83536763,83544602,83581832,83587329,83588299,83590292,83594960,83596913,83597515,83598179,83598723,83605875	Gene ID= ENSG00000138678.10 TPM= 24.96 Transcript Type= protein_coding
chr4	84953448	84956993	84953448	84956993	+	transcript2364.chr4.nnic@NA	transcript2364.chr4.nnic	NA	84953448	84956993	Gene ID= novel_gene_chr4_2365 TPM= 3.19 Transcript Type= NA
chr4	84956757	84961229	84956757	84961229	+	transcript2366.chr4.nnic@NA	transcript2366.chr4.nnic	NA	84956757	84961229	Gene ID= novel_gene_chr4_2367 TPM= 4.25 Transcript Type= NA
chr4	84964690	84966730	84964690	84966730	-	transcript2368.chr4.nnic@NA	transcript2368.chr4.nnic	NA	84964690	84966730	Gene ID= novel_gene_chr4_2369 TPM= 2.12 Transcript Type= NA
chr4	84966264	84987169	84966264	84987169	+	transcript2360.chr4.nnic@WDFY3-AS2	transcript2360.chr4.nnic	processed_transcript	84966264,84967610,84969725,84986106	84967127,84967640,84969876,84987169	Gene ID= ENSG00000180769.8 TPM= 3.19 Transcript Type= NA
chr4	85591033	85592641	85591033	85592641	-	transcript2372.chr4.nnic@NA	transcript2372.chr4.nnic	NA	85591033	85592641	Gene ID= novel_gene_chr4_2373 TPM= 19.12 Transcript Type= NA
chr4	85755648	85757368	85755648	85757368	-	transcript2374.chr4.nnic@NA	transcript2374.chr4.nnic	NA	85755648	85757368	Gene ID= novel_gene_chr4_2375 TPM= 11.68 Transcript Type= NA
chr4	85778706	86001223	85778706	86001223	+	ENST00000395183.6@ARHGAP24	ENST00000395183.6	protein_coding	85778706,85923648,85942066,85972036,85974888,85977570,85994583,86000479	85778965,85923770,85942273,85972168,85974961,85977691,85995657,86001223	Gene ID= ENSG00000138639.17 TPM= 9.56 Transcript Type= protein_coding
chr4	86922122	86923582	86922122	86923582	-	transcript2398.chr4.nnic@NA	transcript2398.chr4.nnic	NA	86922122	86923582	Gene ID= novel_gene_chr4_2399 TPM= 5.31 Transcript Type= NA
chr4	87006988	87141038	87006988	87141038	+	ENST00000307808.10@AFF1	ENST00000307808.10	protein_coding	87006988,87046166,87046695,87084120,87089984,87091793,87094915,87105628,87105808,87108159,87114367,87125037,87126099,87127026,87127643,87131083,87131793,87132271,87134474,87135580	87007424,87046286,87047594,87084164,87090070,87091829,87094969,87105682,87105845,87108315,87115299,87125143,87126336,87127117,87127703,87131219,87131864,87132408,87134694,87141038	Gene ID= ENSG00000172493.20 TPM= 11.68 Transcript Type= protein_coding
chr4	86934968	86990339	86934968	86990339	+	transcript2390.chr4.nnic@AFF1	transcript2390.chr4.nnic	protein_coding	86934968,86948498,86988438	86935240,86948571,86990339	Gene ID= ENSG00000172493.20 TPM= 2.12 Transcript Type= NA
chr4	86935074	86974068	86935074	86974068	+	ENST00000511996.5@AFF1	ENST00000511996.5	protein_coding	86935074,86948498,86973830	86935240,86948571,86974068	Gene ID= ENSG00000172493.20 TPM= 11.68 Transcript Type= processed_transcript
chr4	87115611	87118627	87115611	87118627	-	transcript2396.chr4.nnic@NA	transcript2396.chr4.nnic	NA	87115611	87118627	Gene ID= novel_gene_chr4_2397 TPM= 14.87 Transcript Type= NA
chr4	87303789	87322906	87303789	87322906	-	ENST00000328546.4@HSD17B13	ENST00000328546.4	protein_coding	87322632,87318329,87317092,87315493,87313823,87310243,87303789	87322906,87318436,87317223,87315599,87313960,87310359,87305308	Gene ID= ENSG00000170509.11 TPM= 1.06 Transcript Type= protein_coding
chr4	87336610	87391386	87336610	87391386	-	ENST00000358290.8@HSD17B11	ENST00000358290.8	protein_coding	87390861,87382255,87374699,87372709,87357279,87340490,87336610	87391386,87382362,87374830,87372815,87357416,87340606,87337366	Gene ID= ENSG00000198189.10 TPM= 8.5 Transcript Type= protein_coding
chr4	87422553	87458345	87422553	87458345	+	transcript2411.chr4.nic@NUDT9	transcript2411.chr4.nic	protein_coding	87422553,87434981,87438277,87441829,87449142,87451589,87454371,87457843	87422617,87435220,87438372,87441915,87449253,87451735,87454455,87458345	Gene ID= ENSG00000170502.12 TPM= 2.12 Transcript Type= NA
chr4	87422573	87451714	87422573	87451714	+	transcript2416.chr4.nic@NUDT9	transcript2416.chr4.nic	protein_coding	87422573,87434981,87438277,87441829,87449142,87451589	87423012,87435220,87438372,87441915,87449253,87451714	Gene ID= ENSG00000170502.12 TPM= 2.12 Transcript Type= NA
chr4	87422582	87458345	87422582	87458345	+	ENST00000302174.8@NUDT9	ENST00000302174.8	protein_coding	87422582,87434981,87438277,87441829,87449142,87451589,87454371,87457843	87423012,87435220,87438372,87441915,87449253,87451735,87454455,87458345	Gene ID= ENSG00000170502.12 TPM= 44.61 Transcript Type= protein_coding
chr4	87473335	87529504	87473335	87529504	-	ENST00000282470.10@SPARCL1	ENST00000282470.10	protein_coding	87529045,87499521,87494981,87493582,87491618,87490760,87490273,87482424,87480372,87479430,87473335	87529504,87499585,87495127,87494598,87491690,87490878,87490393,87482560,87480520,87479578,87473803	Gene ID= ENSG00000152583.12 TPM= 201.81 Transcript Type= protein_coding
chr4	87494369	87529404	87494369	87529404	-	ENST00000541496.1@SPARCL1	ENST00000541496.1	protein_coding	87529045,87499521,87494981,87494369	87529404,87499585,87495143,87494598	Gene ID= ENSG00000152583.12 TPM= 3.19 Transcript Type= protein_coding
chr4	87975688	87983297	87975688	87983297	+	ENST00000395080.7@SPP1	ENST00000395080.7	protein_coding	87975688,87976882,87977059,87980046,87980393,87981475,87982492	87975800,87976949,87977097,87980126,87980434,87981798,87983297	Gene ID= ENSG00000118785.13 TPM= 1.06 Transcript Type= protein_coding
chr4	87975667	87983426	87975667	87983426	+	ENST00000237623.11@SPP1	ENST00000237623.11	protein_coding	87975667,87976882,87977059,87980046,87981475,87982492	87975800,87976949,87977097,87980126,87981798,87983426	Gene ID= ENSG00000118785.13 TPM= 1.06 Transcript Type= protein_coding
chr4	88007581	88044896	88007581	88044896	+	transcript2451.chr4.nic@PKD2	transcript2451.chr4.nic	protein_coding	88007581,88019458,88036220,88038251,88043233	88008328,88019571,88036353,88038501,88044896	Gene ID= ENSG00000118762.7 TPM= 4.25 Transcript Type= NA
chr4	88007668	88077777	88007668	88077777	+	ENST00000237596.6@PKD2	ENST00000237596.6	protein_coding	88007668,88019458,88036220,88038251,88043233,88046642,88051991,88056086,88057983,88061906,88065374,88065762,88067898,88074812,88075458	88008328,88019571,88036353,88038501,88043457,88046870,88052158,88056267,88058103,88062004,88065495,88065879,88068061,88074959,88077777	Gene ID= ENSG00000118762.7 TPM= 15.93 Transcript Type= protein_coding
chr4	88257620	88284561	88257620	88284561	-	transcript2455.chr4.nnic@PPM1K	transcript2455.chr4.nnic	protein_coding	88284406,88278144,88277143,88268741,88268190,88265001,88262020,88257620	88284561,88278642,88277243,88268906,88268334,88265135,88262726,88258824	Gene ID= ENSG00000163644.14 TPM= 27.88 Transcript Type= NA
chr4	88274930	88284576	88274930	88284576	-	transcript2477.chr4.nnic@PPM1K	transcript2477.chr4.nnic	protein_coding	88284406,88278144,88277143,88274930	88284576,88278642,88277243,88276777	Gene ID= ENSG00000163644.14 TPM= 7.44 Transcript Type= NA
chr4	88283117	88284561	88283117	88284561	-	transcript2482.chr4.nnic@NA	transcript2482.chr4.nnic	NA	88283117	88284561	Gene ID= novel_gene_chr4_2483 TPM= 2.66 Transcript Type= NA
chr4	88378863	88443111	88378863	88443111	+	ENST00000264346.11@HERC6	ENST00000264346.11	protein_coding	88378863,88383221,88385499,88390652,88393488,88396015,88396851,88398142,88404876,88405554,88408524,88413077,88417425,88423860,88424595,88428580,88431162,88435725,88436905,88437711,88439874,88440148,88442234	88379120,88383380,88385575,88390879,88393582,88396142,88396987,88398209,88404997,88405613,88408617,88413266,88417579,88423973,88424702,88428750,88431305,88435891,88436971,88437781,88440057,88440250,88443111	Gene ID= ENSG00000138642.14 TPM= 11.68 Transcript Type= protein_coding
chr4	88520985	88523813	88520985	88523813	-	ENST00000273968.4@PYURF	ENST00000273968.4	protein_coding	88523498,88520985	88523813,88522029	Gene ID= ENSG00000145337.4 TPM= 275.1 Transcript Type= protein_coding
chr4	88521008	88523782	88521008	88523782	-	transcript2494.chr4.nnic@NA	transcript2494.chr4.nnic	NA	88521008	88523782	Gene ID= novel_gene_chr4_2495 TPM= 6.37 Transcript Type= NA
chr4	88592423	88708542	88592423	88708542	+	ENST00000402738.5@HERC3	ENST00000402738.5	protein_coding	88592423,88595557,88605795,88649840,88652012,88652869,88654042,88655174,88655875,88658415,88662431,88664153,88667377,88667892,88669860,88670139,88676218,88676334,88677964,88680093,88681159,88686736,88687217,88704098,88704508,88706752	88592574,88595614,88606049,88649999,88652088,88653090,88654133,88655304,88656035,88658491,88662555,88664212,88667488,88668081,88670023,88670252,88676241,88676423,88678134,88680236,88681325,88686802,88687299,88704281,88704610,88708542	Gene ID= ENSG00000138641.15 TPM= 14.87 Transcript Type= protein_coding
chr4	88695915	88698235	88695915	88698235	-	ENST00000323061.5@NAP1L5	ENST00000323061.5	protein_coding	88695915	88698235	Gene ID= ENSG00000177432.6 TPM= 11.68 Transcript Type= protein_coding
chr4	88727426	88823231	88727426	88823231	-	ENST00000503556.5@FAM13A	ENST00000503556.5	protein_coding	88822976,88790586,88787753,88781165,88767983,88767553,88758754,88750424,88749771,88748952,88747631,88746932,88739030,88737472,88732002,88731327,88727426	88823231,88790627,88787932,88781351,88768059,88767595,88758901,88750637,88749909,88749033,88747851,88747015,88739125,88737555,88732198,88731428,88728659	Gene ID= ENSG00000138640.14 TPM= 1.06 Transcript Type= protein_coding
chr4	89726053	89837228	89726053	89837228	-	ENST00000394991.7@SNCA	ENST00000394991.7	protein_coding	89836962,89835547,89828143,89822246,89729194,89726053	89837228,89835692,89828184,89822388,89729277,89726660	Gene ID= ENSG00000145335.15 TPM= 63.2 Transcript Type= protein_coding
chr4	89726053	89837139	89726053	89837139	-	ENST00000394986.5@SNCA	ENST00000394986.5	protein_coding	89836743,89835547,89828143,89822246,89729194,89726053	89837139,89835692,89828184,89822388,89729277,89726660	Gene ID= ENSG00000145335.15 TPM= 13.28 Transcript Type= protein_coding
chr4	89791390	89796099	89791390	89796099	-	transcript2522.chr4.nnic@NA	transcript2522.chr4.nnic	NA	89791390	89796099	Gene ID= novel_gene_chr4_2523 TPM= 2.12 Transcript Type= NA
chr4	89879532	89954629	89879532	89954629	+	ENST00000394980.5@MMRN1	ENST00000394980.5	protein_coding	89879532,89894724,89909276,89911944,89923168,89927795,89934810,89951605,89952997	89879602,89895594,89909395,89912050,89923272,89927968,89936798,89951751,89954629	Gene ID= ENSG00000138722.9 TPM= 2.12 Transcript Type= protein_coding
chr4	90900096	90904887	90900096	90904887	-	transcript2527.chr4.nnic@NA	transcript2527.chr4.nnic	NA	90900096	90904887	Gene ID= novel_gene_chr4_2528 TPM= 2.12 Transcript Type= NA
chr4	91358396	91360537	91358396	91360537	-	transcript2529.chr4.nnic@NA	transcript2529.chr4.nnic	NA	91358396	91360537	Gene ID= novel_gene_chr4_2530 TPM= 2.12 Transcript Type= NA
chr4	94207611	94291290	94207611	94291290	+	ENST00000359052.8@SMARCAD1	ENST00000359052.8	protein_coding	94207611,94208346,94226119,94233954,94236952,94240906,94249654,94250752,94252616,94264707,94270728,94273617,94274738,94274890,94276339,94277022,94278422,94278616,94278923,94280592,94281472,94283121,94284960,94289473	94207735,94208584,94226296,94234122,94237018,94241006,94249755,94250833,94253007,94264906,94270818,94273716,94274797,94274965,94276474,94277159,94278517,94278733,94279050,94280780,94281590,94283303,94285069,94291290	Gene ID= ENSG00000163104.17 TPM= 3.19 Transcript Type= protein_coding
chr4	94207845	94290821	94207845	94290821	+	ENST00000457823.6@SMARCAD1	ENST00000457823.6	protein_coding	94207845,94208346,94226119,94233954,94236952,94240906,94249654,94250752,94252616,94264707,94270728,94273617,94274738,94274890,94276339,94277022,94278422,94278616,94278923,94280592,94281472,94283121,94284960,94289473	94208070,94208584,94226296,94234122,94237018,94241006,94249755,94250833,94253007,94264906,94270818,94273716,94274797,94274965,94276474,94277159,94278517,94278733,94279050,94280780,94281590,94283303,94285069,94290821	Gene ID= ENSG00000163104.17 TPM= 1.06 Transcript Type= protein_coding
chr4	94451875	94610637	94451875	94610637	+	transcript2580.chr4.nic@PDLIM5	transcript2580.chr4.nic	protein_coding	94451875,94455247,94523724,94573351,94575943,94584986,94585565,94586408,94608059,94610161	94451995,94455384,94523875,94573393,94576034,94585003,94585737,94586444,94608178,94610637	Gene ID= ENSG00000163110.14 TPM= 28.12 Transcript Type= NA
chr4	94451918	94549986	94451918	94549986	+	transcript2608.chr4.nic@PDLIM5	transcript2608.chr4.nic	protein_coding	94451918,94455247,94523724,94549794	94451995,94455384,94523875,94549986	Gene ID= ENSG00000163110.14 TPM= 25.19 Transcript Type= NA
chr4	94451857	94588216	94451857	94588216	+	ENST00000380180.7@PDLIM5	ENST00000380180.7	protein_coding	94451857,94455247,94523724,94573351,94575943,94584986,94585565,94586408,94586989	94451995,94455384,94523875,94573393,94576034,94585003,94585737,94586444,94588216	Gene ID= ENSG00000163110.14 TPM= 21.03 Transcript Type= protein_coding
chr4	94451857	94668227	94451857	94668227	+	ENST00000615540.4@PDLIM5	ENST00000615540.4	protein_coding	94451857,94455247,94523724,94573351,94575943,94584986,94585565,94586408,94608059,94610161,94611069,94618004,94640276,94654460,94657427,94662422,94663978	94451995,94455384,94523875,94573393,94576034,94585003,94585737,94586444,94608178,94610304,94611200,94618191,94640450,94654640,94657547,94662537,94668227	Gene ID= ENSG00000163110.14 TPM= 129.11 Transcript Type= protein_coding
chr4	94451956	94665500	94451956	94665500	+	ENST00000542407.5@PDLIM5	ENST00000542407.5	protein_coding	94451956,94455247,94523724,94573351,94575943,94585565,94586408,94618004,94640276,94654460,94657427,94662422,94663978	94451995,94455384,94523875,94573393,94576034,94585737,94586444,94618191,94640450,94654640,94657547,94662537,94665500	Gene ID= ENSG00000163110.14 TPM= 5.91 Transcript Type= protein_coding
chr4	94451886	94457184	94451886	94457184	+	ENST00000359265.8@PDLIM5	ENST00000359265.8	protein_coding	94451886,94455247,94456244	94451995,94455384,94457184	Gene ID= ENSG00000163110.14 TPM= 12.8 Transcript Type= protein_coding
chr4	94451928	94573735	94451928	94573735	+	ENST00000509333.5@PDLIM5	ENST00000509333.5	protein_coding	94451928,94455247,94523724,94573351	94451995,94455384,94523875,94573735	Gene ID= ENSG00000163110.14 TPM= 1.83 Transcript Type= retained_intron
chr4	94455245	94665501	94455245	94665501	+	ENST00000514743.5@PDLIM5	ENST00000514743.5	protein_coding	94455245,94523724,94573351,94575943,94584986,94585565,94586408,94608059,94610161,94611069,94618004,94640276,94654460,94657427,94662422,94663978	94455384,94523875,94573393,94576034,94585003,94585737,94586444,94608178,94610304,94611200,94618191,94640450,94654640,94657547,94662537,94665501	Gene ID= ENSG00000163110.14 TPM= 43.58 Transcript Type= protein_coding
chr4	94455245	94588127	94455245	94588127	+	ENST00000508216.5@PDLIM5	ENST00000508216.5	protein_coding	94455245,94523724,94573351,94575943,94584986,94585565,94586408,94586989	94455384,94523875,94573393,94576034,94585003,94585737,94586444,94588127	Gene ID= ENSG00000163110.14 TPM= 74.8 Transcript Type= protein_coding
chr4	94454327	94457785	94454327	94457785	-	transcript2652.chr4.nnic@NA	transcript2652.chr4.nnic	NA	94454327	94457785	Gene ID= novel_gene_chr4_2653 TPM= 12.75 Transcript Type= NA
chr4	94469962	94476181	94469962	94476181	-	transcript2664.chr4.nnic@NA	transcript2664.chr4.nnic	NA	94469962	94476181	Gene ID= novel_gene_chr4_2665 TPM= 22.31 Transcript Type= NA
chr4	94479332	94483960	94479332	94483960	-	transcript2646.chr4.nnic@NA	transcript2646.chr4.nnic	NA	94479332	94483960	Gene ID= novel_gene_chr4_2647 TPM= 27.62 Transcript Type= NA
chr4	94494420	94496887	94494420	94496887	-	transcript2650.chr4.nnic@NA	transcript2650.chr4.nnic	NA	94494420	94496887	Gene ID= novel_gene_chr4_2651 TPM= 45.67 Transcript Type= NA
chr4	94501083	94504582	94501083	94504582	-	transcript2654.chr4.nnic@NA	transcript2654.chr4.nnic	NA	94501083	94504582	Gene ID= novel_gene_chr4_2655 TPM= 7.44 Transcript Type= NA
chr4	94535837	94539293	94535837	94539293	-	transcript2666.chr4.nnic@NA	transcript2666.chr4.nnic	NA	94535837	94539293	Gene ID= novel_gene_chr4_2667 TPM= 22.31 Transcript Type= NA
chr4	94563960	94567247	94563960	94567247	-	transcript2656.chr4.nnic@NA	transcript2656.chr4.nnic	NA	94563960	94567247	Gene ID= novel_gene_chr4_2657 TPM= 6.37 Transcript Type= NA
chr4	94577582	94585001	94577582	94585001	-	transcript2624.chr4.nnic@NA	transcript2624.chr4.nnic	NA	94578133,94577582	94585001,94577817	Gene ID= novel_gene_chr4_2625 TPM= 96.66 Transcript Type= NA
chr4	94590262	94596269	94590262	94596269	+	transcript2626.chr4.nnic@NA	transcript2626.chr4.nnic	NA	94590262	94596269	Gene ID= novel_gene_chr4_2627 TPM= 11.68 Transcript Type= NA
chr4	94607267	94610955	94607267	94610955	-	transcript2648.chr4.nnic@NA	transcript2648.chr4.nnic	NA	94607267	94610955	Gene ID= novel_gene_chr4_2649 TPM= 8.5 Transcript Type= NA
chr4	94683426	94685795	94683426	94685795	-	transcript2670.chr4.nnic@NA	transcript2670.chr4.nnic	NA	94683426	94685795	Gene ID= novel_gene_chr4_2671 TPM= 2.12 Transcript Type= NA
chr4	98261375	98393185	98261375	98393185	+	transcript2685.chr4.nic@RAP1GDS1	transcript2685.chr4.nic	protein_coding	98261375,98293408,98343139,98352476,98379017,98387436,98391952	98261569,98293515,98343261,98352601,98379163,98387503,98393185	Gene ID= ENSG00000138698.14 TPM= 5.31 Transcript Type= NA
chr4	98371117	98373572	98371117	98373572	-	transcript2688.chr4.nnic@NA	transcript2688.chr4.nnic	NA	98371117	98373572	Gene ID= novel_gene_chr4_2689 TPM= 2.12 Transcript Type= NA
chr4	98470367	98658675	98470367	98658675	-	transcript2698.chr4.nnic@TSPAN5	transcript2698.chr4.nnic	protein_coding	98658146,98507678,98482005,98478685,98476413,98476189,98470367	98658675,98507728,98482175,98478810,98476460,98476305,98472587	Gene ID= ENSG00000168785.7 TPM= 4.25 Transcript Type= NA
chr4	98470367	98658629	98470367	98658629	-	ENST00000305798.7@TSPAN5	ENST00000305798.7	protein_coding	98658146,98507678,98486738,98482005,98478685,98476413,98476189,98470367	98658629,98507728,98486884,98482175,98478810,98476460,98476305,98472587	Gene ID= ENSG00000168785.7 TPM= 9.56 Transcript Type= protein_coding
chr4	98871684	98930637	98871684	98930637	-	ENST00000450253.6@EIF4E	ENST00000450253.6	protein_coding	98929095,98901876,98891237,98887889,98887079,98884922,98871684	98930637,98901982,98891332,98887952,98887192,98885061,98881142	Gene ID= ENSG00000151247.12 TPM= 10.62 Transcript Type= protein_coding
chr4	98894103	98896508	98894103	98896508	+	transcript2710.chr4.nnic@NA	transcript2710.chr4.nnic	NA	98894103	98896508	Gene ID= novel_gene_chr4_2711 TPM= 6.37 Transcript Type= NA
chr4	98995620	99062813	98995620	99062813	+	ENST00000296411.10@METAP1	ENST00000296411.10	protein_coding	98995620,99028867,99034230,99035400,99039374,99041043,99043249,99045179,99048733,99057753,99061154	98995867,99028918,99034342,99035460,99039465,99041126,99043387,99045310,99048876,99057818,99062813	Gene ID= ENSG00000164024.11 TPM= 84.97 Transcript Type= protein_coding
chr4	99070978	99088751	99070978	99088751	-	ENST00000296412.12@ADH5	ENST00000296412.12	protein_coding	99088689,99085115,99081975,99081365,99076704,99076292,99074914,99072573,99070978	99088751,99085216,99082116,99081452,99076923,99076552,99075049,99072711,99072441	Gene ID= ENSG00000197894.10 TPM= 50.98 Transcript Type= protein_coding
chr4	99075225	99088717	99075225	99088717	-	ENST00000508511.5@ADH5	ENST00000508511.5	protein_coding	99088689,99085115,99081975,99081365,99076704,99075225	99088717,99085216,99082116,99081452,99076923,99076552	Gene ID= ENSG00000197894.10 TPM= 1.06 Transcript Type= retained_intron
chr4	99546709	99564017	99546709	99564017	-	ENST00000394877.7@TRMT10A	ENST00000394877.7	protein_coding	99563913,99559154,99558049,99557345,99556146,99553785,99550885,99546709	99564017,99559350,99558211,99557416,99556220,99553934,99550990,99549356	Gene ID= ENSG00000145331.13 TPM= 1.06 Transcript Type= protein_coding
chr4	99564083	99623999	99564083	99623999	+	ENST00000457717.5@MTTP	ENST00000457717.5	protein_coding	99564083,99574809,99581905,99583374,99589643,99591235,99591651,99594733,99597067,99600565,99601607,99606748,99608766,99611143,99611332,99612913,99618974,99621061,99622677	99564237,99574970,99582092,99583517,99589750,99591351,99591790,99594883,99597224,99600733,99601714,99606960,99608977,99611240,99611453,99613140,99619098,99621231,99623999	Gene ID= ENSG00000138823.13 TPM= 4.25 Transcript Type= protein_coding
chr4	99878336	99894490	99878336	99894490	-	ENST00000499666.6@LAMTOR3	ENST00000499666.6	protein_coding	99894335,99893955,99892000,99887296,99885542,99884062,99878336	99894490,99894000,99892034,99887354,99885675,99884125,99882067	Gene ID= ENSG00000109270.12 TPM= 2.12 Transcript Type= protein_coding
chr4	99881207	99894376	99881207	99894376	-	ENST00000226522.8@LAMTOR3	ENST00000226522.8	protein_coding	99894335,99893955,99892000,99887296,99885542,99884062,99881207	99894376,99894000,99892034,99887354,99885654,99884125,99882067	Gene ID= ENSG00000109270.12 TPM= 14.87 Transcript Type= protein_coding
chr4	99899396	99946588	99899396	99946588	-	ENST00000334223.6@DNAJB14	ENST00000334223.6	protein_coding	99946439,99923040,99908711,99906517,99905597,99903726,99899396	99946588,99923185,99908896,99906611,99905706,99903898,99901152	Gene ID= ENSG00000164031.16 TPM= 1.06 Transcript Type= nonsense_mediated_decay
chr4	99948088	99950388	99948088	99950388	-	ENST00000296417.5@H2AFZ	ENST00000296417.5	protein_coding	99950168,99949663,99949273,99948811,99948088	99950388,99949740,99949386,99948940,99948523	Gene ID= ENSG00000164032.11 TPM= 43.55 Transcript Type= protein_coding
chr4	99948086	99950355	99948086	99950355	-	ENST00000511348.1@H2AFZ	ENST00000511348.1	protein_coding	99950168,99948086	99950355,99949740	Gene ID= ENSG00000164032.11 TPM= 1.06 Transcript Type= retained_intron
chr4	100185870	100190468	100185870	100190468	-	ENST00000273990.6@DDIT4L	ENST00000273990.6	protein_coding	100190303,100189893,100185870	100190468,100190032,100188167	Gene ID= ENSG00000145358.6 TPM= 4.25 Transcript Type= protein_coding
chr4	100395341	100518093	100395341	100518093	-	ENST00000296420.8@EMCN	ENST00000296420.8	protein_coding	100517851,100479917,100475038,100465423,100447533,100423312,100423021,100421282,100417117,100415898,100410282,100395341	100518093,100480039,100475109,100465539,100447571,100423404,100423080,100421377,100417141,100415959,100410355,100398373	Gene ID= ENSG00000164035.9 TPM= 7.44 Transcript Type= protein_coding
chr4	101023430	101347480	101023430	101347480	-	ENST00000394854.7@PPP3CA	ENST00000394854.7	protein_coding	101346739,101195916,101108954,101099611,101098367,101093776,101083186,101080532,101063232,101061087,101040482,101032267,101029166,101023430	101347480,101196116,101109078,101099722,101098512,101093915,101083263,101080626,101063357,101061161,101040566,101032364,101029195,101026061	Gene ID= ENSG00000138814.16 TPM= 11.68 Transcript Type= protein_coding
chr4	101168420	101171363	101168420	101171363	+	transcript2781.chr4.nnic@NA	transcript2781.chr4.nnic	NA	101168420	101171363	Gene ID= novel_gene_chr4_2782 TPM= 2.12 Transcript Type= NA
chr4	102261666	102345474	102261666	102345474	-	ENST00000356736.4@SLC39A8	ENST00000356736.4	protein_coding	102345345,102344444,102315668,102307436,102304989,102304317,102267872,102267490,102261666	102345474,102344915,102315830,102307605,102305111,102304481,102268079,102267674,102263193	Gene ID= ENSG00000138821.12 TPM= 3.19 Transcript Type= protein_coding
chr4	102418602	102431249	102418602	102431249	-	ENST00000502883.5@AC098487.1	ENST00000502883.5	lincRNA	102431062,102419697,102418602	102431249,102419794,102418988	Gene ID= ENSG00000248161.5 TPM= 1.06 Transcript Type= lincRNA
chr4	102501898	102617117	102501898	102617117	+	ENST00000505458.5@NFKB1	ENST00000505458.5	protein_coding	102501898,102525512,102529836,102533848,102537858,102566987,102576876,102578881,102580535,102582866,102584682,102593425,102594892,102596138,102597520,102600895,102606496,102607150,102607649,102610575,102612044,102612434,102613425,102616434	102502167,102525557,102529914,102533885,102537956,102567135,102577039,102579039,102580639,102582957,102584820,102593568,102594981,102596332,102597661,102601009,102606697,102607319,102607751,102610699,102612110,102612606,102613581,102617117	Gene ID= ENSG00000109320.11 TPM= 9.56 Transcript Type= protein_coding
chr4	102631488	102760951	102631488	102760951	-	transcript2802.chr4.nnic@MANBA	transcript2802.chr4.nnic	protein_coding	102760718,102714438,102690596,102689574,102673919,102671281,102668963,102664685,102657682,102650537,102639713,102635865,102634788,102631488	102760951,102714561,102690771,102689684,102674070,102671398,102669049,102664852,102657900,102650701,102639857,102636007,102635045,102632281	Gene ID= ENSG00000109323.8 TPM= 7.44 Transcript Type= NA
chr4	102678604	102680592	102678604	102680592	+	transcript2806.chr4.nnic@NA	transcript2806.chr4.nnic	NA	102678604	102680592	Gene ID= novel_gene_chr4_2807 TPM= 2.12 Transcript Type= NA
chr4	102795973	102827552	102795973	102827552	-	transcript2813.chr4.nic@UBE2D3	transcript2813.chr4.nic	protein_coding	102827427,102826485,102809792,102809672,102802561,102801454,102799407,102798928,102795973	102827552,102826636,102809855,102809703,102802638,102801559,102799500,102798977,102797460	Gene ID= ENSG00000109332.19 TPM= 11.33 Transcript Type= NA
chr4	102794383	102827812	102794383	102827812	-	ENST00000453744.6@UBE2D3	ENST00000453744.6	protein_coding	102827427,102826485,102809792,102809672,102802561,102801454,102799407,102794383	102827812,102826636,102809855,102809703,102802638,102801559,102799500,102797460	Gene ID= ENSG00000109332.19 TPM= 27.62 Transcript Type= protein_coding
chr4	102795976	102827948	102795976	102827948	-	ENST00000394801.8@UBE2D3	ENST00000394801.8	protein_coding	102827592,102826485,102809792,102809672,102802561,102801454,102799407,102795976	102827948,102826636,102809855,102809703,102802638,102801559,102799500,102797460	Gene ID= ENSG00000109332.19 TPM= 23.02 Transcript Type= protein_coding
chr4	102795976	102828159	102795976	102828159	-	ENST00000394803.9@UBE2D3	ENST00000394803.9	protein_coding	102827944,102826485,102809792,102809672,102802561,102801454,102799407,102795976	102828159,102826636,102809855,102809703,102802638,102801559,102799500,102797460	Gene ID= ENSG00000109332.19 TPM= 10.27 Transcript Type= protein_coding
chr4	102796134	102827122	102796134	102827122	-	ENST00000343106.9@UBE2D3	ENST00000343106.9	protein_coding	102826485,102809792,102809672,102802561,102801454,102799407,102798928,102796134	102827122,102809855,102809703,102802638,102801559,102799500,102798977,102797460	Gene ID= ENSG00000109332.19 TPM= 2.12 Transcript Type= protein_coding
chr4	103020225	103076685	103020225	103076685	-	transcript2865.chr4.nic@SLC9B2	transcript2865.chr4.nic	protein_coding	103076184,103067461,103066327,103050240,103048893,103047051,103044890,103043296,103031700,103028747,103026368,103020225	103076685,103067592,103066507,103050382,103049020,103047226,103044996,103043445,103031808,103028883,103026591,103020389	Gene ID= ENSG00000164038.14 TPM= 2.12 Transcript Type= NA
chr4	103079435	103099883	103079435	103099883	-	ENST00000296424.8@BDH2	ENST00000296424.8	protein_coding	103099783,103096183,103095203,103092600,103091177,103086480,103085349,103082871,103082081,103079435	103099883,103096274,103095281,103092696,103091285,103086540,103085462,103082929,103082173,103079755	Gene ID= ENSG00000164039.14 TPM= 10.62 Transcript Type= protein_coding
chr4	103079477	103099828	103079477	103099828	-	ENST00000492366.5@BDH2	ENST00000492366.5	protein_coding	103099783,103096183,103095203,103092600,103091177,103085349,103082871,103082081,103079477	103099828,103096274,103095281,103092696,103091285,103086540,103082929,103082173,103079755	Gene ID= ENSG00000164039.14 TPM= 4.25 Transcript Type= retained_intron
chr4	104468312	104494894	104468312	104494894	-	ENST00000394767.2@CXXC4	ENST00000394767.2	protein_coding	104494701,104490744,104468312	104494894,104492059,104472366	Gene ID= ENSG00000168772.10 TPM= 2.12 Transcript Type= protein_coding
chr4	105369565	105474041	105369565	105474041	-	transcript2880.chr4.nic@PPA2	transcript2880.chr4.nic	protein_coding	105473894,105453598,105449350,105446383,105437950,105424196,105399037,105396249,105386567,105370837,105369565	105474041,105453642,105449403,105446502,105438036,105424322,105399164,105396334,105386636,105370873,105369753	Gene ID= ENSG00000138777.19 TPM= 4.78 Transcript Type= NA
chr4	105369565	105474089	105369565	105474089	-	transcript2883.chr4.nic@PPA2	transcript2883.chr4.nic	protein_coding	105473894,105456681,105453598,105449350,105446383,105399037,105396249,105386567,105370837,105369565	105474089,105456745,105453642,105449403,105446502,105399164,105396334,105386636,105370873,105369753	Gene ID= ENSG00000138777.19 TPM= 3.72 Transcript Type= NA
chr4	105369077	105474081	105369077	105474081	-	ENST00000341695.9@PPA2	ENST00000341695.9	protein_coding	105473894,105456681,105453598,105449350,105446383,105437950,105424196,105399037,105396249,105386567,105370837,105369077	105474081,105456745,105453642,105449403,105446502,105438036,105424322,105399164,105396334,105386636,105370873,105369753	Gene ID= ENSG00000138777.19 TPM= 5.31 Transcript Type= protein_coding
chr4	105369565	105474050	105369565	105474050	-	ENST00000354147.7@PPA2	ENST00000354147.7	protein_coding	105473894,105399037,105396249,105386567,105370837,105369565	105474050,105399164,105396334,105386636,105370873,105369753	Gene ID= ENSG00000138777.19 TPM= 3.72 Transcript Type= protein_coding
chr4	105369561	105474014	105369561	105474014	-	ENST00000509031.5@PPA2	ENST00000509031.5	protein_coding	105473894,105456681,105456248,105453598,105449350,105446383,105437950,105424196,105399037,105396249,105386567,105370837,105369561	105474014,105456745,105456291,105453642,105449403,105446502,105438036,105424322,105399164,105396334,105386636,105370873,105369753	Gene ID= ENSG00000138777.19 TPM= 1.59 Transcript Type= nonsense_mediated_decay
chr4	105419957	105424115	105419957	105424115	-	transcript2890.chr4.nnic@NA	transcript2890.chr4.nnic	NA	105419957	105424115	Gene ID= novel_gene_chr4_2891 TPM= 2.12 Transcript Type= NA
chr4	105459695	105461584	105459695	105461584	-	transcript2894.chr4.nnic@NA	transcript2894.chr4.nnic	NA	105459695	105461584	Gene ID= novel_gene_chr4_2895 TPM= 2.12 Transcript Type= NA
chr4	105471363	105474077	105471363	105474077	-	transcript2892.chr4.nnic@NA	transcript2892.chr4.nnic	NA	105471363	105474077	Gene ID= novel_gene_chr4_2893 TPM= 5.31 Transcript Type= NA
chr4	105682627	105708651	105682627	105708651	-	transcript2898.chr4.nic@INTS12	transcript2898.chr4.nic	protein_coding	105707919,105699850,105695516,105693299,105691976,105686692,105682627	105708651,105700014,105695668,105693486,105692135,105686838,105683317	Gene ID= ENSG00000138785.14 TPM= 4.96 Transcript Type= NA
chr4	105682627	105709108	105682627	105709108	-	ENST00000451321.6@INTS12	ENST00000451321.6	protein_coding	105708638,105699850,105695516,105693299,105691976,105686692,105682627	105709108,105700014,105695668,105693486,105692135,105686838,105683317	Gene ID= ENSG00000138785.14 TPM= 27.27 Transcript Type= protein_coding
chr4	105682627	105708681	105682627	105708681	-	ENST00000340139.9@INTS12	ENST00000340139.9	protein_coding	105708638,105703648,105699850,105695516,105693299,105691976,105686692,105682627	105708681,105703809,105700014,105695668,105693486,105692135,105686838,105683317	Gene ID= ENSG00000138785.14 TPM= 8.15 Transcript Type= protein_coding
chr4	105708818	105847728	105708818	105847728	+	ENST00000515279.5@GSTCD	ENST00000515279.5	protein_coding	105708818,105717593,105719060,105726579,105729406,105822954,105823231,105825672,105834461,105837859,105842065,105845441	105709016,105718039,105719527,105726830,105729499,105823069,105823275,105825800,105834594,105837889,105842134,105847728	Gene ID= ENSG00000138780.14 TPM= 4.78 Transcript Type= protein_coding
chr4	105708784	105847725	105708784	105847725	+	ENST00000394730.7@GSTCD	ENST00000394730.7	protein_coding	105708784,105717593,105719060,105726579,105729406,105822954,105823231,105825672,105834461,105837859,105842065,105845441	105709016,105717778,105719527,105726830,105729499,105823069,105823275,105825800,105834594,105837889,105842134,105847725	Gene ID= ENSG00000138780.14 TPM= 1.59 Transcript Type= protein_coding
chr4	105895437	105971674	105895437	105971674	+	ENST00000379987.6@NPNT	ENST00000379987.6	protein_coding	105895437,105897901,105927336,105937009,105938301,105940075,105940514,105942307,105958471,105959028,105967188,105968895	105895723,105898001,105927428,105937128,105938420,105940209,105940636,105942702,105958557,105959126,105967444,105971674	Gene ID= ENSG00000168743.12 TPM= 8.5 Transcript Type= protein_coding
chr4	106046080	106316230	106046080	106316230	-	ENST00000361687.8@TBCK	ENST00000361687.8	protein_coding	106315931,106308768,106295094,106251866,106250418,106248921,106248245,106247139,106244626,106242470,106236759,106236390,106235269,106233588,106232938,106231729,106230363,106212750,106194718,106193609,106171095,106116203,106095482,106046080	106316230,106308989,106295166,106252007,106250478,106248982,106248306,106247287,106244764,106242569,106236808,106236519,106235367,106233650,106233064,106231779,106230446,106212835,106194754,106193770,106171270,106116378,106095641,106046680	Gene ID= ENSG00000145348.16 TPM= 1.06 Transcript Type= protein_coding
chr4	106316507	106349226	106316507	106349226	+	ENST00000394701.4@AIMP1	ENST00000394701.4	protein_coding	106316507,106324985,106327451,106328076,106331672,106336869,106347526	106316594,106325118,106327564,106328243,106331883,106337037,106349226	Gene ID= ENSG00000164022.16 TPM= 18.06 Transcript Type= protein_coding
chr4	107613666	107719951	107613666	107719951	-	transcript2918.chr4.nic@PAPSS1	transcript2918.chr4.nic	protein_coding	107719843,107701171,107693771,107687039,107682015,107659959,107656896,107654695,107653491,107644802,107631631,107613666	107719951,107701285,107694006,107687177,107682133,107660072,107657007,107654900,107653626,107645070,107631860,107614387	Gene ID= ENSG00000138801.8 TPM= 3.19 Transcript Type= NA
chr4	107613666	107720452	107613666	107720452	-	ENST00000265174.4@PAPSS1	ENST00000265174.4	protein_coding	107720120,107701171,107693771,107687039,107682015,107659959,107656896,107654695,107653491,107644802,107631631,107613666	107720452,107701285,107694006,107687177,107682133,107660072,107657007,107654900,107653626,107645070,107631860,107614387	Gene ID= ENSG00000138801.8 TPM= 12.75 Transcript Type= protein_coding
chr4	107909110	107989693	107909110	107989693	-	transcript2950.chr4.nnic@AC096564.1	transcript2950.chr4.nnic	antisense_RNA	107989568,107909110	107989693,107910549	Gene ID= ENSG00000245293.2 TPM= 5.31 Transcript Type= NA
chr4	107910376	107989693	107910376	107989693	-	transcript2951.chr4.nnic@AC096564.1	transcript2951.chr4.nnic	antisense_RNA	107989568,107910376	107989693,107910549	Gene ID= ENSG00000245293.2 TPM= 2.12 Transcript Type= NA
chr4	107931369	107953457	107931369	107953457	+	ENST00000332884.10@CYP2U1	ENST00000332884.10	protein_coding	107931369,107944970,107947376,107949350,107950245	107932133,107945605,107947537,107949517,107953457	Gene ID= ENSG00000155016.17 TPM= 14.87 Transcript Type= protein_coding
chr4	107931574	107953457	107931574	107953457	+	transcript2945.chr4.nnic@CYP2U1	transcript2945.chr4.nnic	protein_coding	107931574,107947376,107949350,107950245	107932133,107947537,107949517,107953457	Gene ID= ENSG00000155016.17 TPM= 3.19 Transcript Type= NA
chr4	107989784	108035175	107989784	108035175	+	ENST00000309522.7@HADH	ENST00000309522.7	protein_coding	107989784,108009759,108014431,108019540,108023474,108027688,108033176,108034239	107990064,108009887,108014588,108019666,108023563,108027760,108033292,108035175	Gene ID= ENSG00000138796.16 TPM= 249.61 Transcript Type= protein_coding
chr4	107989896	108035118	107989896	108035118	+	ENST00000403312.6@HADH	ENST00000403312.6	protein_coding	107989896,108009759,108014431,108019540,108023474,108027688,108028861,108033176,108034239	107990064,108009887,108014588,108019666,108023563,108027760,108028869,108033292,108035118	Gene ID= ENSG00000138796.16 TPM= 1.06 Transcript Type= protein_coding
chr4	108047545	108168422	108047545	108168422	-	ENST00000265165.5@LEF1	ENST00000265165.5	protein_coding	108167555,108165097,108163568,108089125,108083356,108081586,108079492,108078220,108070663,108064336,108063623,108047545	108168422,108165163,108163701,108089257,108083446,108081669,108079614,108078382,108070770,108064384,108063663,108048751	Gene ID= ENSG00000138795.9 TPM= 3.19 Transcript Type= protein_coding
chr4	108620566	108625255	108620566	108625255	+	ENST00000394667.7@RPL34	ENST00000394667.7	protein_coding	108620566,108621951,108622105,108622515,108625128	108620600,108622024,108622204,108622618,108625255	Gene ID= ENSG00000109475.16 TPM= 460.18 Transcript Type= protein_coding
chr4	108620590	108625255	108620590	108625255	+	ENST00000394665.5@RPL34	ENST00000394665.5	protein_coding	108620590,108621951,108622105,108622515,108625128	108620712,108622024,108622204,108622618,108625255	Gene ID= ENSG00000109475.16 TPM= 79.93 Transcript Type= protein_coding
chr4	108650584	108667820	108650584	108667820	+	ENST00000361564.8@OSTC	ENST00000361564.8	protein_coding	108650584,108655564,108657450,108667247	108650794,108655657,108657647,108667820	Gene ID= ENSG00000198856.12 TPM= 81.79 Transcript Type= protein_coding
chr4	108650585	108667818	108650585	108667818	+	ENST00000613215.4@OSTC	ENST00000613215.4	protein_coding	108650585,108655564,108667247	108650794,108655657,108667818	Gene ID= ENSG00000198856.12 TPM= 2.12 Transcript Type= protein_coding
chr4	109429963	109433817	109429963	109433817	-	ENST00000499359.2@SEC24B-AS1	ENST00000499359.2	antisense_RNA	109433734,109431692,109429963	109433817,109431746,109430780	Gene ID= ENSG00000247950.6 TPM= 1.06 Transcript Type= antisense_RNA
chr4	109433815	109540454	109433815	109540454	+	transcript2984.chr4.nic@SEC24B	transcript2984.chr4.nic	protein_coding	109433815,109462901,109473004,109491327,109494615,109506331,109510009,109511957,109513747,109516528,109520366,109521117,109521420,109524818,109525346,109526226,109527322,109530289,109531385,109532639,109533593,109538493,109539561	109434002,109463644,109473186,109491407,109494856,109506512,109510111,109512083,109513856,109516640,109520484,109521172,109521626,109524941,109525504,109526399,109527432,109530464,109531522,109532743,109533685,109538596,109540454	Gene ID= ENSG00000138802.11 TPM= 12.75 Transcript Type= NA
chr4	109560205	109688726	109560205	109688726	+	ENST00000394650.6@MCUB	ENST00000394650.6	protein_coding	109560205,109659011,109660195,109664290,109682582,109684443,109685251,109687515	109560436,109659086,109660365,109664394,109682742,109684646,109685367,109688726	Gene ID= ENSG00000005059.15 TPM= 4.25 Transcript Type= protein_coding
chr4	109688742	109703473	109688742	109703473	-	ENST00000265164.6@CASP6	ENST00000265164.6	protein_coding	109703356,109698300,109697622,109696410,109694525,109690850,109688742	109703473,109698342,109697768,109696486,109694700,109691009,109689568	Gene ID= ENSG00000138794.9 TPM= 2.12 Transcript Type= protein_coding
chr4	109726933	109730070	109726933	109730070	-	transcript3009.chr4.nnic@NA	transcript3009.chr4.nnic	NA	109726933	109730070	Gene ID= novel_gene_chr4_3010 TPM= 2.12 Transcript Type= NA
chr4	109730976	109802132	109730976	109802132	-	transcript3011.chr4.nnic@CFI	transcript3011.chr4.nnic	protein_coding	109801915,109766554,109764537,109761517,109760523,109760270,109757763,109752468,109749499,109749218,109746222,109742491,109734659,109730976	109802132,109766824,109764690,109761692,109760636,109760380,109757783,109752503,109749602,109749321,109746502,109742595,109734800,109731342	Gene ID= ENSG00000205403.12 TPM= 3.19 Transcript Type= NA
chr4	109740694	109802179	109740694	109802179	-	ENST00000394634.6@CFI	ENST00000394634.6	protein_coding	109801915,109766554,109764537,109761517,109760523,109760270,109757763,109752468,109749499,109749218,109746222,109742491,109740694	109802179,109766824,109764690,109761692,109760636,109760380,109757783,109752503,109749602,109749321,109746502,109742595,109741110	Gene ID= ENSG00000205403.12 TPM= 7.44 Transcript Type= protein_coding
chr4	109815510	109824740	109815510	109824740	+	ENST00000394631.7@GAR1	ENST00000394631.7	protein_coding	109815510,109816153,109817936,109819001,109822347,109823965,109824418	109815545,109816378,109818090,109819060,109822488,109824033,109824740	Gene ID= ENSG00000109534.16 TPM= 2.12 Transcript Type= protein_coding
chr4	109815553	109824737	109815553	109824737	+	ENST00000226796.6@GAR1	ENST00000226796.6	protein_coding	109815553,109816153,109817936,109819001,109822347,109823965,109824418	109815804,109816378,109818090,109819060,109822488,109824033,109824737	Gene ID= ENSG00000109534.16 TPM= 8.5 Transcript Type= protein_coding
chr4	110476073	110565285	110476073	110565285	+	ENST00000265162.9@ENPEP	ENST00000265162.9	protein_coding	110476073,110488541,110491033,110506637,110509653,110510245,110513415,110515377,110520008,110520215,110531198,110542751,110543015,110548176,110549346,110549528,110549716,110553315,110559647,110561406	110477058,110488682,110491164,110506757,110509807,110510358,110513549,110515442,110520073,110520366,110531277,110542887,110543070,110548326,110549419,110549632,110549886,110553455,110559725,110565285	Gene ID= ENSG00000138792.9 TPM= 2.12 Transcript Type= protein_coding
chr4	110617423	110637020	110617423	110637020	-	ENST00000394598.6@PITX2	ENST00000394598.6	protein_coding	110636781,110632953,110632343,110621164,110617423	110637020,110633008,110632480,110621369,110618688	Gene ID= ENSG00000164093.15 TPM= 2.12 Transcript Type= protein_coding
chr4	110617423	110623103	110617423	110623103	-	ENST00000306732.7@PITX2	ENST00000306732.7	protein_coding	110622256,110621164,110617423	110623103,110621369,110618688	Gene ID= ENSG00000164093.15 TPM= 1.06 Transcript Type= protein_coding
chr4	112229561	112231596	112229561	112231596	-	ENST00000562919.1@AC109347.1	ENST00000562919.1	antisense_RNA	112229561	112231596	Gene ID= ENSG00000260526.1 TPM= 1.06 Transcript Type= antisense_RNA
chr4	112231737	112270047	112231737	112270047	+	ENST00000274000.9@AP1AR	ENST00000274000.9	protein_coding	112231737,112253208,112254747,112257772,112260766,112262988,112265009,112265734,112266588,112268144	112232174,112253256,112254773,112257797,112260862,112263086,112265067,112265807,112266716,112270047	Gene ID= ENSG00000138660.11 TPM= 27.62 Transcript Type= protein_coding
chr4	112274542	112285903	112274542	112285903	-	ENST00000361717.3@TIFA	ENST00000361717.3	protein_coding	112285640,112274542	112285903,112278434	Gene ID= ENSG00000145365.10 TPM= 5.31 Transcript Type= protein_coding
chr4	112637167	112657586	112637167	112657586	+	transcript3043.chr4.nic@LARP7	transcript3043.chr4.nic	protein_coding	112637167,112644668,112646351,112646588,112646791,112647034,112647199,112647651,112649535,112650461,112653077,112654068,112657247	112637239,112644871,112646451,112646671,112646955,112647127,112647549,112647834,112649686,112650582,112653236,112654159,112657586	Gene ID= ENSG00000174720.15 TPM= 6.85 Transcript Type= NA
chr4	112636964	112657586	112636964	112657586	+	ENST00000344442.9@LARP7	ENST00000344442.9	protein_coding	112636964,112644668,112646351,112646588,112646791,112647034,112647199,112647690,112649535,112650461,112653077,112654068,112657247	112637239,112644871,112646451,112646671,112646955,112647127,112647549,112647834,112649686,112650582,112653236,112654159,112657586	Gene ID= ENSG00000174720.15 TPM= 15.88 Transcript Type= protein_coding
chr4	112637470	112657586	112637470	112657586	+	transcript3046.chr4.nic@LARP7	transcript3046.chr4.nic	protein_coding	112637470,112644668,112646351,112646588,112646791,112647034,112647199,112647651,112649535,112650461,112653077,112654068,112657247	112637603,112644871,112646451,112646671,112646955,112647127,112647549,112647834,112649686,112650582,112653236,112654159,112657586	Gene ID= ENSG00000174720.15 TPM= 4.73 Transcript Type= NA
chr4	112637456	112657592	112637456	112657592	+	ENST00000324052.10@LARP7	ENST00000324052.10	protein_coding	112637456,112644668,112646351,112646588,112646791,112647034,112647199,112647690,112649535,112650461,112653077,112654068,112657247	112637603,112644871,112646451,112646671,112646955,112647127,112647549,112647834,112649686,112650582,112653236,112654159,112657592	Gene ID= ENSG00000174720.15 TPM= 21.99 Transcript Type= protein_coding
chr4	112637456	112647449	112637456	112647449	+	ENST00000505034.5@LARP7	ENST00000505034.5	protein_coding	112637456,112644668,112646351,112646588,112646791,112647034,112647199	112637603,112644871,112646451,112646671,112646955,112647127,112647449	Gene ID= ENSG00000174720.15 TPM= 1.06 Transcript Type= protein_coding
chr4	112637127	112657586	112637127	112657586	+	ENST00000509622.5@LARP7	ENST00000509622.5	protein_coding	112637127,112644668,112646351,112646588,112646791,112647034,112647199,112647690,112649535,112650461,112653077,112654068,112657247	112637239,112644768,112646451,112646671,112646955,112647127,112647549,112647834,112649686,112650582,112653236,112654159,112657586	Gene ID= ENSG00000174720.15 TPM= 1.54 Transcript Type= nonsense_mediated_decay
chr4	113214046	113214393	113214046	113214393	-	ENST00000485827.1@AC004057.1	ENST00000485827.1	transcribed_processed_pseudogene	113214046	113214393	Gene ID= ENSG00000196656.7 TPM= 408.93 Transcript Type= transcribed_processed_pseudogene
chr4	113452419	113761798	113452419	113761798	-	transcript3068.chr4.nic@CAMK2D	transcript3068.chr4.nic	protein_coding	113761004,113759320,113661713,113609152,113552031,113548657,113537341,113531216,113517563,113515069,113513830,113513328,113509638,113502936,113500463,113465529,113460147,113457335,113455726,113452419	113761798,113759414,113661772,113609206,113552096,113548729,113537443,113531299,113517657,113515191,113513913,113513370,113509675,113502977,113500511,113465604,113460241,113457563,113455821,113454515	Gene ID= ENSG00000145349.16 TPM= 36.36 Transcript Type= NA
chr4	113452419	113761810	113452419	113761810	-	transcript3071.chr4.nic@CAMK2D	transcript3071.chr4.nic	protein_coding	113761004,113759320,113661713,113609152,113552031,113548657,113537341,113531216,113517563,113515069,113513830,113513328,113509638,113508236,113500463,113465529,113460147,113457335,113455726,113452419	113761810,113759414,113661772,113609206,113552096,113548729,113537443,113531299,113517657,113515191,113513913,113513370,113509675,113508268,113500511,113465604,113460241,113457563,113455821,113454515	Gene ID= ENSG00000145349.16 TPM= 93.71 Transcript Type= NA
chr4	113452419	113761774	113452419	113761774	-	transcript3082.chr4.nic@CAMK2D	transcript3082.chr4.nic	protein_coding	113761004,113759320,113661713,113609152,113552031,113548657,113537341,113531216,113517563,113515069,113513830,113513328,113509638,113508236,113500463,113465529,113460147,113457335,113452419	113761774,113759414,113661772,113609206,113552096,113548729,113537443,113531299,113517657,113515191,113513913,113513370,113509675,113508268,113500511,113465604,113460241,113457563,113454515	Gene ID= ENSG00000145349.16 TPM= 14.05 Transcript Type= NA
chr4	113507252	113761774	113507252	113761774	-	transcript3114.chr4.nic@CAMK2D	transcript3114.chr4.nic	protein_coding	113761004,113759320,113661713,113609152,113552031,113548657,113537341,113531216,113517563,113515069,113513830,113513328,113507252	113761774,113759414,113661772,113609206,113552096,113548729,113537443,113531299,113517657,113515191,113513913,113513370,113509675	Gene ID= ENSG00000145349.16 TPM= 7.44 Transcript Type= NA
chr4	113452419	113505241	113452419	113505241	-	transcript3118.chr4.nic@CAMK2D	transcript3118.chr4.nic	protein_coding	113500463,113465529,113460147,113457335,113452419	113505241,113465604,113460241,113457563,113454515	Gene ID= ENSG00000145349.16 TPM= 11.33 Transcript Type= NA
chr4	113493860	113498491	113493860	113498491	-	transcript3139.chr4.nnic@NA	transcript3139.chr4.nnic	NA	113493860	113498491	Gene ID= novel_gene_chr4_3140 TPM= 3.19 Transcript Type= NA
chr4	113606601	113606866	113606601	113606866	+	transcript3137.chr4.nnic@NA	transcript3137.chr4.nnic	NA	113606601	113606866	Gene ID= novel_gene_chr4_3138 TPM= 2.12 Transcript Type= NA
chr4	113732979	113735323	113732979	113735323	+	transcript3133.chr4.nnic@NA	transcript3133.chr4.nnic	NA	113732979	113735323	Gene ID= novel_gene_chr4_3134 TPM= 13.81 Transcript Type= NA
chr4	113737485	113738220	113737485	113738220	+	transcript3135.chr4.nnic@NA	transcript3135.chr4.nnic	NA	113737485	113738220	Gene ID= novel_gene_chr4_3136 TPM= 3.19 Transcript Type= NA
chr4	113970100	113972318	113970100	113972318	-	transcript3151.chr4.nic@ARSJ	transcript3151.chr4.nic	protein_coding	113970830,113970100	113972318,113970510	Gene ID= ENSG00000180801.13 TPM= 2.12 Transcript Type= NA
chr4	113972835	113974302	113972835	113974302	+	transcript3153.chr4.nnic@NA	transcript3153.chr4.nnic	NA	113972835	113974302	Gene ID= novel_gene_chr4_3154 TPM= 2.12 Transcript Type= NA
chr4	114334801	114364991	114334801	114364991	-	transcript3158.chr4.nnic@NA	transcript3158.chr4.nnic	NA	114364808,114335129,114334801	114364991,114335244,114335026	Gene ID= novel_gene_chr4_3159 TPM= 4.25 Transcript Type= NA
chr4	114598890	114676873	114598890	114676873	+	transcript3160.chr4.nic@UGT8	transcript3160.chr4.nic	protein_coding	114598890,114619423,114622879,114663995,114665680,114668085,114675925	114598974,114619525,114623702,114664137,114665756,114668304,114676873	Gene ID= ENSG00000174607.10 TPM= 2.12 Transcript Type= NA
chr4	116344041	116355077	116344041	116355077	+	transcript3162.chr4.nnic@NA	transcript3162.chr4.nnic	NA	116344041,116352977,116353880	116344137,116353055,116355077	Gene ID= novel_gene_chr4_3163 TPM= 4.25 Transcript Type= NA
chr4	117083844	117085547	117083844	117085547	-	transcript3166.chr4.nnic@NA	transcript3166.chr4.nnic	NA	117083844	117085547	Gene ID= novel_gene_chr4_3167 TPM= 2.12 Transcript Type= NA
chr4	118278709	118279823	118278709	118279823	+	ENST00000602520.5@SNHG8	ENST00000602520.5	lincRNA	118278709,118279389,118279624	118278792,118279431,118279823	Gene ID= ENSG00000269893.6 TPM= 7.97 Transcript Type= lincRNA
chr4	118278709	118279823	118278709	118279823	+	ENST00000602414.5@SNHG8	ENST00000602414.5	lincRNA	118278709,118279389,118279624	118279137,118279431,118279823	Gene ID= ENSG00000269893.6 TPM= 4.78 Transcript Type= lincRNA
chr4	118278709	118279823	118278709	118279823	+	transcript3171.chr4.nic@SNHG8	transcript3171.chr4.nic	lincRNA	118278709,118279389	118279137,118279823	Gene ID= ENSG00000269893.6 TPM= 2.12 Transcript Type= NA
chr4	118278758	118279821	118278758	118279821	+	ENST00000602819.5@SNHG8	ENST00000602819.5	lincRNA	118278758,118278944,118279389,118279624	118278792,118279137,118279431,118279821	Gene ID= ENSG00000269893.6 TPM= 4.25 Transcript Type= lincRNA
chr4	118631255	118634979	118631255	118634979	+	transcript3173.chr4.nnic@NA	transcript3173.chr4.nnic	NA	118631255	118634979	Gene ID= novel_gene_chr4_3174 TPM= 8.5 Transcript Type= NA
chr4	118685368	118715433	118685368	118715433	+	ENST00000388822.9@METTL14	ENST00000388822.9	protein_coding	118685368,118687923,118689370,118691532,118691981,118694436,118697182,118700550,118703935,118705611,118709998	118685600,118688011,118689457,118691612,118692068,118694526,118697323,118700642,118704051,118705821,118715433	Gene ID= ENSG00000145388.14 TPM= 3.19 Transcript Type= protein_coding
chr4	118722823	118836138	118722823	118836138	-	ENST00000280551.10@SEC24D	ENST00000280551.10	protein_coding	118835941,118833579,118824620,118817264,118815451,118815028,118805843,118797683,118768173,118764802,118757721,118752697,118751996,118744944,118743988,118740941,118740663,118739149,118738261,118732733,118731316,118728561,118722823	118836138,118833737,118824749,118817412,118815726,118815155,118805954,118797810,118768311,118764917,118757845,118752888,118752089,118745060,118744158,118741037,118740808,118739287,118738379,118732912,118731507,118728650,118723655	Gene ID= ENSG00000150961.14 TPM= 15.93 Transcript Type= protein_coding
chr4	118888841	119061247	118888841	119061247	+	ENST00000307142.8@SYNPO2	ENST00000307142.8	protein_coding	118888841,119023430,119026627,119029845,119057401	118889141,119023581,119027438,119032027,119061247	Gene ID= ENSG00000172403.10 TPM= 30.27 Transcript Type= protein_coding
chr4	118888841	119061245	118888841	119061245	+	ENST00000448416.6@SYNPO2	ENST00000448416.6	protein_coding	118888841,119023430,119057401	118889141,119023581,119061245	Gene ID= ENSG00000172403.10 TPM= 50.98 Transcript Type= protein_coding
chr4	118888844	118894834	118888844	118894834	+	transcript3204.chr4.nnic@NA	transcript3204.chr4.nnic	NA	118888844	118894834	Gene ID= novel_gene_chr4_3205 TPM= 6.37 Transcript Type= NA
chr4	119028224	119030731	119028224	119030731	-	transcript3214.chr4.nnic@NA	transcript3214.chr4.nnic	NA	119028224	119030731	Gene ID= novel_gene_chr4_3215 TPM= 3.19 Transcript Type= NA
chr4	119030043	119035833	119030043	119035833	+	transcript3202.chr4.nnic@NA	transcript3202.chr4.nnic	NA	119030043	119035833	Gene ID= novel_gene_chr4_3203 TPM= 9.03 Transcript Type= NA
chr4	119035858	119036852	119035858	119036852	+	transcript3200.chr4.nnic@NA	transcript3200.chr4.nnic	NA	119035858	119036852	Gene ID= novel_gene_chr4_3201 TPM= 4.25 Transcript Type= NA
chr4	119117456	119128295	119117456	119128295	-	transcript3220.chr4.nnic@NA	transcript3220.chr4.nnic	NA	119128198,119122207,119117456	119128295,119122273,119120101	Gene ID= novel_gene_chr4_3221 TPM= 2.12 Transcript Type= NA
chr4	119118784	119128293	119118784	119128293	-	transcript3227.chr4.nnic@NA	transcript3227.chr4.nnic	NA	119128198,119122207,119118784	119128293,119122358,119120101	Gene ID= novel_gene_chr4_3221 TPM= 2.12 Transcript Type= NA
chr4	119135810	119186391	119135810	119186391	+	transcript3236.chr4.nnic@MYOZ2	transcript3236.chr4.nnic	protein_coding	119135810,119136512,119150872,119158022,119164211,119172810,119185966	119135982,119136601,119151041,119158151,119164394,119172855,119186391	Gene ID= ENSG00000172399.5 TPM= 20.18 Transcript Type= NA
chr4	119135801	119169292	119135801	119169292	+	transcript3243.chr4.nnic@MYOZ2	transcript3243.chr4.nnic	protein_coding	119135801,119136512,119150872,119158022,119164211,119168562	119135982,119136601,119151041,119158151,119164394,119169292	Gene ID= ENSG00000172399.5 TPM= 53.64 Transcript Type= NA
chr4	119135784	119187789	119135784	119187789	+	ENST00000307128.5@MYOZ2	ENST00000307128.5	protein_coding	119135784,119136512,119150872,119158022,119164211,119185966	119135982,119136601,119151041,119158151,119164394,119187789	Gene ID= ENSG00000172399.5 TPM= 252.79 Transcript Type= protein_coding
chr4	119153064	119157590	119153064	119157590	-	transcript3269.chr4.nnic@NA	transcript3269.chr4.nnic	NA	119153064	119157590	Gene ID= novel_gene_chr4_3270 TPM= 20.18 Transcript Type= NA
chr4	119165243	119169290	119165243	119169290	+	transcript3261.chr4.nnic@NA	transcript3261.chr4.nnic	NA	119165243	119169290	Gene ID= novel_gene_chr4_3262 TPM= 9.56 Transcript Type= NA
chr4	119182560	119186380	119182560	119186380	+	transcript3267.chr4.nnic@NA	transcript3267.chr4.nnic	NA	119182560	119186380	Gene ID= novel_gene_chr4_3268 TPM= 6.37 Transcript Type= NA
chr4	119212562	119214138	119212562	119214138	+	transcript3278.chr4.nic@USP53	transcript3278.chr4.nic	protein_coding	119212562,119214070	119212873,119214138	Gene ID= ENSG00000145390.11 TPM= 6.37 Transcript Type= NA
chr4	119296419	119304445	119296419	119304445	-	ENST00000399075.6@C4orf3	ENST00000399075.6	protein_coding	119304245,119300336,119296419	119304445,119300733,119298779	Gene ID= ENSG00000164096.12 TPM= 63.73 Transcript Type= protein_coding
chr4	119454801	119499966	119454801	119499966	+	transcript3296.chr4.nic@AC093752.1	transcript3296.chr4.nic	transcribed_unprocessed_pseudogene	119454801,119460183,119460731,119461717,119462896,119493333,119494433,119497811,119499561	119455133,119460242,119460827,119461851,119462979,119493437,119494523,119497903,119499966	Gene ID= ENSG00000245958.6 TPM= 4.25 Transcript Type= NA
chr4	119454801	119480927	119454801	119480927	+	transcript3301.chr4.nnic@AC093752.1	transcript3301.chr4.nnic	transcribed_unprocessed_pseudogene	119454801,119460183,119460731,119461717,119462896,119479826	119455133,119460242,119460827,119461851,119462979,119480927	Gene ID= ENSG00000245958.6 TPM= 3.19 Transcript Type= NA
chr4	119521373	119525264	119521373	119525264	-	transcript3304.chr4.nnic@NA	transcript3304.chr4.nnic	NA	119521373	119525264	Gene ID= novel_gene_chr4_3305 TPM= 2.12 Transcript Type= NA
chr4	119939540	119964293	119939540	119964293	+	ENST00000505122.2@LINC02502	ENST00000505122.2	lincRNA	119939540,119963788	119939675,119964293	Gene ID= ENSG00000250392.2 TPM= 22.31 Transcript Type= lincRNA
chr4	120066962	120070206	120066962	120070206	+	transcript3310.chr4.nnic@NA	transcript3310.chr4.nnic	NA	120066962	120070206	Gene ID= novel_gene_chr4_3311 TPM= 4.25 Transcript Type= NA
chr4	120815909	120922837	120815909	120922837	-	transcript3321.chr4.nic@PRDM5	transcript3321.chr4.nic	protein_coding	120922516,120907474,120853418,120821171,120818353,120815909	120922837,120907557,120853540,120821345,120818527,120816924	Gene ID= ENSG00000138738.10 TPM= 3.19 Transcript Type= NA
chr4	121035613	121072518	121035613	121072518	-	ENST00000379692.8@NDNF	ENST00000379692.8	protein_coding	121071993,121045650,121039930,121035613	121072518,121045838,121040054,121037657	Gene ID= ENSG00000173376.13 TPM= 5.31 Transcript Type= protein_coding
chr4	121067874	121071780	121067874	121071780	+	transcript3328.chr4.nnic@NA	transcript3328.chr4.nnic	NA	121067874	121071780	Gene ID= novel_gene_chr4_3329 TPM= 2.12 Transcript Type= NA
chr4	121329314	121381059	121329314	121381059	-	ENST00000394427.2@QRFPR	ENST00000394427.2	protein_coding	121380308,121340452,121336807,121332821,121330426,121329314	121381059,121340610,121336868,121333056,121330523,121329714	Gene ID= ENSG00000186867.10 TPM= 1.06 Transcript Type= protein_coding
chr4	121381142	121515972	121381142	121515972	+	transcript3334.chr4.nnic@TUBB4BP5	transcript3334.chr4.nnic	processed_pseudogene	121381142,121489991,121514428	121381204,121490045,121515972	Gene ID= ENSG00000224062.4 TPM= 2.12 Transcript Type= NA
chr4	121667955	121697113	121667955	121697113	-	ENST00000296511.9@ANXA5	ENST00000296511.9	protein_coding	121696863,121696581,121686288,121684677,121683364,121681671,121678415,121677894,121672533,121671547,121669954,121669602,121667955	121697113,121696624,121686372,121684771,121683477,121681761,121678494,121677950,121672626,121671642,121670012,121669724,121668527	Gene ID= ENSG00000164111.14 TPM= 352.99 Transcript Type= protein_coding
chr4	121758933	121765185	121758933	121765185	-	ENST00000337677.9@TMEM155	ENST00000337677.9	protein_coding	121764817,121763764,121762727,121761830,121761538,121758933	121765185,121763872,121762798,121761892,121761695,121760474	Gene ID= ENSG00000164112.12 TPM= 2.12 Transcript Type= protein_coding
chr4	121801317	121816909	121801317	121816909	+	ENST00000243498.9@EXOSC9	ENST00000243498.9	protein_coding	121801317,121801827,121802674,121802915,121804622,121807540,121809967,121811583,121813234,121813866,121816369,121816772	121801490,121801921,121802793,121803017,121804759,121807622,121810099,121811671,121813380,121814047,121816447,121816909	Gene ID= ENSG00000123737.12 TPM= 13.81 Transcript Type= protein_coding
chr4	121801323	121817021	121801323	121817021	+	ENST00000513654.5@EXOSC9	ENST00000513654.5	protein_coding	121801323,121801827,121802674,121802915,121804622,121807540,121809967,121811583,121813234,121813866,121816772	121801490,121801921,121802793,121803017,121804759,121807622,121810073,121811671,121813380,121816447,121817021	Gene ID= ENSG00000123737.12 TPM= 1.06 Transcript Type= nonsense_mediated_decay
chr4	121824440	121870497	121824440	121870497	-	ENST00000264499.8@BBS7	ENST00000264499.8	protein_coding	121870278,121867981,121863217,121861504,121858992,121855489,121854704,121852956,121848844,121847404,121845504,121843927,121839631,121835144,121833231,121828619,121828402,121828146,121824440	121870497,121868046,121863279,121861679,121859178,121855561,121854820,121853086,121848928,121847506,121845696,121844001,121839696,121835283,121833395,121828728,121828505,121828269,121825993	Gene ID= ENSG00000138686.9 TPM= 1.06 Transcript Type= protein_coding
chr4	121827727	121870450	121827727	121870450	-	ENST00000506636.1@BBS7	ENST00000506636.1	protein_coding	121870278,121867981,121863217,121861504,121858992,121855489,121854704,121852956,121848844,121847404,121845504,121843927,121839631,121835144,121833231,121828619,121828402,121827727	121870450,121868046,121863279,121861679,121859178,121855561,121854820,121853086,121848928,121847506,121845696,121844001,121839696,121835283,121833395,121828728,121828505,121828269	Gene ID= ENSG00000138686.9 TPM= 1.06 Transcript Type= protein_coding
chr4	122152333	122362752	122152333	122362752	+	ENST00000264501.8@KIAA1109	ENST00000264501.8	protein_coding	122152333,122154025,122170615,122173036,122174574,122175850,122186036,122187431,122187895,122190000,122192229,122196635,122197196,122199359,122201009,122207110,122207541,122209159,122209818,122210887,122219340,122220333,122224498,122226707,122229121,122229931,122234773,122238092,122239516,122242998,122243854,122245020,122246152,122246683,122247158,122249485,122250362,122254195,122254805,122255131,122257255,122258701,122262764,122263442,122264252,122266783,122271018,122272160,122274343,122275972,122279775,122281536,122286541,122289087,122301300,122304798,122305877,122307949,122309266,122313628,122315462,122316732,122318147,122324427,122325230,122328104,122331326,122333629,122334344,122336192,122336881,122339207,122343410,122344382,122346623,122347522,122348567,122349158,122349450,122349857,122352904,122353814,122355796,122356621,122359557,122362031	122152584,122154112,122170744,122173152,122174652,122175914,122186222,122187512,122188088,122190079,122192379,122196791,122197274,122199450,122201126,122207265,122207638,122209337,122209924,122211095,122219567,122220470,122224677,122226835,122229240,122230211,122235023,122238350,122240353,122243068,122244027,122245140,122246298,122246810,122247357,122249682,122250573,122254346,122254955,122255283,122257495,122258843,122262983,122263600,122264427,122266958,122271724,122272405,122274436,122276022,122279981,122281774,122286785,122289192,122301397,122304983,122306045,122308160,122309464,122313687,122315688,122316862,122318270,122324536,122325320,122328357,122331541,122333809,122334545,122336353,122337020,122339408,122343610,122344561,122346760,122347779,122348717,122349315,122349642,122350074,122353155,122354017,122355990,122356755,122359722,122362752	Gene ID= ENSG00000138688.15 TPM= 4.25 Transcript Type= protein_coding
chr4	122321981	122327447	122321981	122327447	-	transcript3364.chr4.nnic@NA	transcript3364.chr4.nnic	NA	122321981	122327447	Gene ID= novel_gene_chr4_3365 TPM= 14.87 Transcript Type= NA
chr4	122324464	122362752	122324464	122362752	+	ENST00000306802.8@KIAA1109	ENST00000306802.8	protein_coding	122324464,122325230,122325855,122328104,122331326,122333629,122334344,122336192,122336881,122339207,122343410,122344382,122346623,122347522,122348567,122349158,122349450,122349857,122352904,122353814,122355796,122356621,122359557,122362031	122324536,122325320,122325917,122328357,122331541,122333809,122334440,122336353,122337020,122339408,122343610,122344561,122346760,122347779,122348717,122349315,122349642,122350074,122353155,122354017,122355990,122356755,122359722,122362752	Gene ID= ENSG00000138688.15 TPM= 7.44 Transcript Type= protein_coding
chr4	122700444	122703542	122700444	122703542	+	transcript3374.chr4.nnic@NA	transcript3374.chr4.nnic	NA	122700444	122703542	Gene ID= novel_gene_chr4_3375 TPM= 2.12 Transcript Type= NA
chr4	122892644	122922606	122892644	122922606	-	ENST00000304430.9@NUDT6	ENST00000304430.9	protein_coding	122922335,122917501,122912568,122897624,122892644	122922606,122917704,122912623,122897678,122893225	Gene ID= ENSG00000170917.13 TPM= 6.37 Transcript Type= protein_coding
chr4	123396732	123403760	123396732	123403760	+	transcript3389.chr4.nic@SPRY1	transcript3389.chr4.nic	protein_coding	123396732,123397611,123401537	123396932,123398513,123403760	Gene ID= ENSG00000164056.10 TPM= 30.8 Transcript Type= NA
chr4	123398386	123403760	123398386	123403760	+	ENST00000622283.1@SPRY1	ENST00000622283.1	protein_coding	123398386,123401537	123398513,123403760	Gene ID= ENSG00000164056.10 TPM= 8.5 Transcript Type= protein_coding
chr4	124664052	124712732	124664052	124712732	-	ENST00000504087.5@ANKRD50	ENST00000504087.5	protein_coding	124712458,124710000,124678676,124668984,124664052	124712732,124711274,124678905,124672534,124667514	Gene ID= ENSG00000151458.11 TPM= 6.37 Transcript Type= protein_coding
chr4	125316399	125492932	125316399	125492932	+	ENST00000394329.7@FAT4	ENST00000394329.7	protein_coding	125316399,125398784,125406880,125408444,125414884,125416448,125434245,125446299,125448461,125463563,125468512,125476171,125477155,125479741,125481521,125487345,125489901	125321586,125398915,125407141,125408794,125415806,125416622,125434425,125446543,125452810,125463667,125468819,125476256,125477334,125479865,125481738,125487606,125492932	Gene ID= ENSG00000196159.11 TPM= 11.68 Transcript Type= protein_coding
chr4	127632957	127716775	127632957	127716775	+	ENST00000503626.5@INTU	ENST00000503626.5	protein_coding	127632957,127643521,127656636,127663381,127669036,127674124,127675905,127683804,127684409,127685442,127700010,127704228,127705591,127706487,127708571,127710913,127713936,127716325	127633180,127644056,127656721,127663584,127669154,127674213,127676065,127683900,127684486,127687867,127700063,127704290,127705812,127706969,127708668,127711102,127714093,127716775	Gene ID= ENSG00000164066.12 TPM= 2.12 Transcript Type= nonsense_mediated_decay
chr4	127782140	127840733	127782140	127840733	+	ENST00000296464.8@HSPA4L	ENST00000296464.8	protein_coding	127782140,127794077,127795768,127798587,127801138,127801785,127803629,127804011,127805073,127805687,127807996,127811437,127818325,127820428,127822769,127823517,127827305,127830638,127832683	127782657,127794134,127795908,127798709,127801237,127801918,127803873,127804087,127805224,127805793,127808129,127811636,127818420,127820565,127822894,127823624,127827424,127830799,127840733	Gene ID= ENSG00000164070.11 TPM= 4.25 Transcript Type= protein_coding
chr4	127917732	127965669	127917732	127965669	-	ENST00000641686.1@MFSD8	ENST00000641686.1	protein_coding	127965072,127957501,127949804,127943752,127942045,127939853,127938783,127932985,127930683,127921860,127921524,127917732	127965669,127957592,127949847,127943992,127942158,127939997,127938838,127933093,127930817,127921963,127921771,127920836	Gene ID= ENSG00000164073.10 TPM= 3.19 Transcript Type= protein_coding
chr4	127965274	128036286	127965274	128036286	+	transcript3423.chr4.nnic@ABHD18	transcript3423.chr4.nnic	protein_coding	127965274,127982939,127984339,127989721,128001716,128008920,128009107,128011673,128017363,128020080,128021137,128028475,128030510,128035762	127965606,127983047,127984423,127989821,128001760,128008998,128009191,128011700,128017501,128020169,128021238,128028853,128030672,128036286	Gene ID= ENSG00000164074.14 TPM= 3.19 Transcript Type= NA
chr4	127965274	128037145	127965274	128037145	+	transcript3427.chr4.nic@ABHD18	transcript3427.chr4.nic	protein_coding	127965274,127982939,127984339,127989721,128008920,128009107,128011673,128017363,128020080,128021137,128028475,128030510,128035762	127965606,127983047,127984423,127989821,128008998,128009191,128011700,128017501,128020169,128021238,128028853,128030672,128037145	Gene ID= ENSG00000164074.14 TPM= 18.32 Transcript Type= NA
chr4	127965274	128011067	127965274	128011067	+	transcript3437.chr4.nnic@ABHD18	transcript3437.chr4.nnic	protein_coding	127965274,127982939,127984339,127989721,128008920,128009107,128009549	127965606,127983047,127984423,127989821,128008998,128009191,128011067	Gene ID= ENSG00000164074.14 TPM= 2.39 Transcript Type= NA
chr4	127965315	128036286	127965315	128036286	+	ENST00000473040.6@ABHD18	ENST00000473040.6	protein_coding	127965315,127982939,127984339,128008920,128009107,128009560,128017358,128020080,128021137,128028475,128030510,128035762	127965606,127983047,127984423,128008998,128009201,128009635,128017501,128020169,128021238,128028853,128030672,128036286	Gene ID= ENSG00000164074.14 TPM= 2.12 Transcript Type= nonsense_mediated_decay
chr4	127994894	127997862	127994894	127997862	-	transcript3444.chr4.nnic@NA	transcript3444.chr4.nnic	NA	127994894	127997862	Gene ID= novel_gene_chr4_3445 TPM= 2.12 Transcript Type= NA
chr4	128061293	128108901	128061293	128108901	+	transcript3449.chr4.nnic@LARP1B	transcript3449.chr4.nnic	protein_coding	128061293,128074460,128074934,128077788,128082165,128091001,128091347,128098186,128107139,128107883	128062219,128074518,128074993,128077962,128082305,128091144,128091512,128098330,128107313,128108901	Gene ID= ENSG00000138709.17 TPM= 7.38 Transcript Type= NA
chr4	128061268	128211988	128061268	128211988	+	ENST00000326639.10@LARP1B	ENST00000326639.10	protein_coding	128061268,128074460,128074934,128077788,128082165,128091001,128091347,128098186,128107139,128114570,128121826,128162194,128176872,128178431,128179406,128199439,128200521,128206428,128207256,128209856	128061401,128074518,128074993,128077962,128082305,128091144,128091512,128098330,128107313,128114742,128122188,128162317,128176907,128178642,128179512,128199599,128200665,128206537,128207383,128211988	Gene ID= ENSG00000138709.17 TPM= 1.54 Transcript Type= protein_coding
chr4	128061335	128108901	128061335	128108901	+	ENST00000394288.7@LARP1B	ENST00000394288.7	protein_coding	128061335,128074460,128074934,128077788,128082165,128091001,128091347,128098186,128107139,128107883	128061401,128074518,128074993,128077962,128082305,128091144,128091512,128098330,128107313,128108901	Gene ID= ENSG00000138709.17 TPM= 1.54 Transcript Type= protein_coding
chr4	128061348	128108901	128061348	128108901	+	ENST00000432347.6@LARP1B	ENST00000432347.6	protein_coding	128061348,128074460,128074934,128077788,128082165,128091001,128091347,128098186,128107139	128061401,128074518,128074993,128077962,128082305,128091144,128091512,128098330,128108901	Gene ID= ENSG00000138709.17 TPM= 1.54 Transcript Type= protein_coding
chr4	128269237	128288822	128269237	128288822	-	ENST00000613358.4@PGRMC2	ENST00000613358.4	protein_coding	128287373,128272362,128269237	128288822,128272517,128271413	Gene ID= ENSG00000164040.16 TPM= 11.68 Transcript Type= protein_coding
chr4	128809623	128875224	128809623	128875224	+	ENST00000226319.10@JADE1	ENST00000226319.10	protein_coding	128809623,128831733,128842953,128846375,128848980,128852057,128855630,128857338,128861704,128867856,128871355	128809877,128831810,128843038,128846532,128849167,128852268,128855797,128857454,128862225,128867973,128875224	Gene ID= ENSG00000077684.15 TPM= 20.18 Transcript Type= protein_coding
chr4	128809703	128864081	128809703	128864081	+	ENST00000511647.5@JADE1	ENST00000511647.5	protein_coding	128809703,128831733,128842953,128846375,128848980,128852057,128855630,128857338,128861704	128809877,128831810,128843038,128846532,128849167,128852268,128855797,128857454,128864081	Gene ID= ENSG00000077684.15 TPM= 3.19 Transcript Type= protein_coding
chr4	128883993	129093607	128883993	129093607	-	ENST00000281142.9@SCLT1	ENST00000281142.9	protein_coding	129093070,129082306,129043993,129043395,129039041,129003741,128999672,128997874,128992167,128970378,128965227,128959600,128957026,128952769,128948496,128946007,128942996,128936655,128891059,128888679,128883993	129093607,129082373,129044051,129043467,129039096,129003876,128999794,128997939,128992237,128970468,128965318,128959777,128957124,128952840,128948570,128946152,128943188,128936851,128891137,128888774,128884539	Gene ID= ENSG00000151466.11 TPM= 1.06 Transcript Type= protein_coding
chr4	129039193	129093545	129039193	129093545	-	ENST00000511426.5@SCLT1	ENST00000511426.5	protein_coding	129093070,129082306,129043993,129043395,129039193	129093545,129082373,129044051,129043467,129040212	Gene ID= ENSG00000151466.11 TPM= 1.06 Transcript Type= protein_coding
chr4	129093317	129116640	129093317	129116640	+	ENST00000281146.9@C4orf33	ENST00000281146.9	protein_coding	129093317,129102602,129106587,129109307,129109473,129111686	129094028,129102791,129106647,129109358,129109672,129116640	Gene ID= ENSG00000151470.12 TPM= 5.31 Transcript Type= protein_coding
chr4	129096127	129112687	129096127	129112687	+	ENST00000425929.5@C4orf33	ENST00000425929.5	protein_coding	129096127,129102602,129106587,129109307,129109473,129111686	129096209,129102791,129106647,129109358,129109672,129112687	Gene ID= ENSG00000151470.12 TPM= 6.37 Transcript Type= protein_coding
chr4	139057855	139084496	139057855	139084496	-	ENST00000358635.7@ELF2	ENST00000358635.7	protein_coding	139084133,139073454,139071866,139067684,139061865,139060324,139057855	139084496,139073567,139072039,139067770,139062057,139060674,139059607	Gene ID= ENSG00000109381.19 TPM= 1.06 Transcript Type= protein_coding
chr4	139289917	139301210	139289917	139301210	-	ENST00000539002.5@NDUFC1	ENST00000539002.5	protein_coding	139300602,139295732,139295043,139292530,139289917	139301210,139295960,139295146,139292609,139290092	Gene ID= ENSG00000109390.11 TPM= 67.98 Transcript Type= protein_coding
chr4	139289938	139301204	139289938	139301204	-	ENST00000505036.5@NDUFC1	ENST00000505036.5	protein_coding	139300964,139295732,139295043,139292530,139289938	139301204,139295960,139295146,139292609,139290092	Gene ID= ENSG00000109390.11 TPM= 334.58 Transcript Type= protein_coding
chr4	139289917	139301210	139289917	139301210	-	ENST00000544855.5@NDUFC1	ENST00000544855.5	protein_coding	139300602,139297385,139295732,139295043,139292530,139289917	139301210,139297443,139295960,139295146,139292609,139290092	Gene ID= ENSG00000109390.11 TPM= 35.05 Transcript Type= protein_coding
chr4	139301455	139391382	139301455	139391382	+	ENST00000296543.9@NAA15	ENST00000296543.9	protein_coding	139301455,139334174,139336848,139340912,139342826,139344186,139349462,139351191,139351505,139354026,139357386,139359743,139360500,139361724,139370211,139376365,139378756,139384832,139386133,139387884	139301831,139334258,139336952,139341069,139342960,139344339,139349581,139351286,139351611,139354098,139357555,139359895,139360628,139361937,139370404,139376473,139378854,139384978,139386230,139391382	Gene ID= ENSG00000164134.12 TPM= 11.68 Transcript Type= protein_coding
chr4	139495941	139556238	139495941	139556238	-	ENST00000506866.6@SETD7	ENST00000506866.6	protein_coding	139556098,139546920,139533165,139529031,139523354,139520277,139517885,139495941	139556238,139547049,139533366,139529220,139523435,139520394,139518042,139496521	Gene ID= ENSG00000145391.13 TPM= 1.06 Transcript Type= protein_coding
chr4	139506036	139556774	139506036	139556774	-	ENST00000274031.7@SETD7	ENST00000274031.7	protein_coding	139556098,139546920,139533165,139529031,139523354,139520277,139517885,139506036	139556774,139547049,139533366,139529220,139523435,139520394,139518042,139511843	Gene ID= ENSG00000145391.13 TPM= 41.42 Transcript Type= protein_coding
chr4	139665768	139704253	139665768	139704253	+	ENST00000265498.5@MGST2	ENST00000265498.5	protein_coding	139665768,139678543,139695197,139703455,139704016	139666077,139678642,139695267,139703536,139704253	Gene ID= ENSG00000085871.8 TPM= 36.11 Transcript Type= protein_coding
chr4	139665835	139704224	139665835	139704224	+	ENST00000506797.5@MGST2	ENST00000506797.5	protein_coding	139665835,139678543,139703455,139704016	139666077,139678642,139703536,139704224	Gene ID= ENSG00000085871.8 TPM= 7.44 Transcript Type= protein_coding
chr4	139716753	140154184	139716753	140154184	-	ENST00000509479.6@MAML3	ENST00000509479.6	protein_coding	140152860,139889357,139730416,139725751,139716753	140154184,139890967,139730667,139725835,139720323	Gene ID= ENSG00000196782.12 TPM= 2.12 Transcript Type= protein_coding
chr4	139974865	139978618	139974865	139978618	+	transcript3554.chr4.nnic@NA	transcript3554.chr4.nnic	NA	139974865	139978618	Gene ID= novel_gene_chr4_3555 TPM= 3.19 Transcript Type= NA
chr4	140373510	140382556	140373510	140382556	+	ENST00000614192.4@SCOC	ENST00000614192.4	protein_coding	140373510,140379121,140379569,140380962	140373717,140379192,140379652,140382556	Gene ID= ENSG00000153130.17 TPM= 179.51 Transcript Type= protein_coding
chr4	140373536	140382545	140373536	140382545	+	ENST00000506597.1@SCOC	ENST00000506597.1	protein_coding	140373536,140379121,140380962	140373717,140379192,140382545	Gene ID= ENSG00000153130.17 TPM= 11.68 Transcript Type= protein_coding
chr4	140388455	140427968	140388455	140427968	-	ENST00000325617.9@CLGN	ENST00000325617.9	protein_coding	140427537,140412935,140410553,140409837,140405942,140401985,140400357,140398851,140396092,140395819,140393826,140392586,140392219,140390628,140388455	140427968,140413087,140410626,140409895,140406083,140402066,140400549,140399040,140396205,140395969,140394041,140392711,140392378,140390728,140389304	Gene ID= ENSG00000153132.12 TPM= 15.93 Transcript Type= protein_coding
chr4	140524158	140553770	140524158	140553770	+	ENST00000323570.7@ELMOD2	ENST00000323570.7	protein_coding	140524158,140525420,140527466,140535733,140537412,140540168,140542574,140543453,140550230	140524280,140525570,140527494,140535830,140537541,140540301,140542642,140543586,140553770	Gene ID= ENSG00000179387.9 TPM= 7.44 Transcript Type= protein_coding
chr4	140524231	140550341	140524231	140550341	+	transcript3578.chr4.nic@ELMOD2	transcript3578.chr4.nic	protein_coding	140524231,140525420,140527466,140535733,140537412,140540168,140542574,140543453,140550230	140524661,140525570,140527494,140535830,140537541,140540301,140542642,140543586,140550341	Gene ID= ENSG00000179387.9 TPM= 2.12 Transcript Type= NA
chr4	140663894	140666744	140663894	140666744	+	transcript3583.chr4.nnic@NA	transcript3583.chr4.nnic	NA	140663894	140666744	Gene ID= novel_gene_chr4_3584 TPM= 2.12 Transcript Type= NA
chr4	140944549	141133338	140944549	141133338	-	transcript3594.chr4.nic@RNF150	transcript3594.chr4.nic	protein_coding	141132325,140967623,140949301,140947654,140944549	141133338,140967873,140949372,140947736,140944810	Gene ID= ENSG00000170153.10 TPM= 3.19 Transcript Type= NA
chr4	140861174	140865347	140861174	140865347	-	transcript3601.chr4.nnic@NA	transcript3601.chr4.nnic	NA	140861174	140865347	Gene ID= novel_gene_chr4_3602 TPM= 13.81 Transcript Type= NA
chr4	141129464	141129769	141129464	141129769	+	transcript3599.chr4.nnic@NA	transcript3599.chr4.nnic	NA	141129464	141129769	Gene ID= novel_gene_chr4_3600 TPM= 2.12 Transcript Type= NA
chr4	141130416	141133390	141130416	141133390	-	transcript3603.chr4.nnic@NA	transcript3603.chr4.nnic	NA	141130416	141133390	Gene ID= novel_gene_chr4_3604 TPM= 3.19 Transcript Type= NA
chr4	141220898	141234697	141220898	141234697	+	transcript3614.chr4.nic@ZNF330	transcript3614.chr4.nic	protein_coding	141220898,141222366,141224487,141224607,141226767,141229571,141230166,141231439,141232525,141233715	141221077,141222491,141224506,141224677,141226846,141229697,141230270,141231485,141232642,141234697	Gene ID= ENSG00000109445.10 TPM= 3.19 Transcript Type= NA
chr4	141220898	141222581	141220898	141222581	+	transcript3629.chr4.nic@ZNF330	transcript3629.chr4.nic	protein_coding	141220898,141222366	141221077,141222581	Gene ID= ENSG00000109445.10 TPM= 5.31 Transcript Type= NA
chr4	141220887	141234697	141220887	141234697	+	ENST00000262990.8@ZNF330	ENST00000262990.8	protein_coding	141220887,141222366,141224487,141224607,141226767,141229571,141230166,141231439,141232525,141233715	141221108,141222491,141224506,141224677,141226846,141229697,141230270,141231485,141232642,141234697	Gene ID= ENSG00000109445.10 TPM= 38.24 Transcript Type= protein_coding
chr4	141636599	141733435	141636599	141733435	+	ENST00000320650.8@IL15	ENST00000320650.8	protein_coding	141636599,141656186,141719366,141720469,141721924,141727940,141729847,141732738	141636748,141656307,141719476,141720566,141722008,141727984,141729984,141733435	Gene ID= ENSG00000164136.16 TPM= 1.06 Transcript Type= protein_coding
chr4	142028033	142462753	142028033	142462753	-	ENST00000262992.8@INPP4B	ENST00000262992.8	protein_coding	142462663,142431169,142429173,142405206,142402938,142314712,142305458,142270663,142260492,142237864,142208896,142208425,142193087,142173632,142160358,142145840,142124588,142123292,142122128,142112542,142108093,142086144,142082031,142028033	142462753,142431385,142429217,142405324,142403054,142314762,142305537,142270774,142260564,142238011,142209026,142208529,142193195,142173809,142160561,142145996,142124760,142123415,142122245,142112682,142108190,142086256,142082185,142028914	Gene ID= ENSG00000109452.12 TPM= 5.31 Transcript Type= protein_coding
chr4	142028745	142305954	142028745	142305954	-	transcript3644.chr4.nic@INPP4B	transcript3644.chr4.nic	protein_coding	142305877,142305458,142270663,142260492,142237864,142208896,142208425,142193087,142173632,142160358,142145840,142124588,142123292,142122128,142112542,142108093,142086144,142082031,142028745	142305954,142305537,142270774,142260564,142238011,142209026,142208529,142193195,142173809,142160561,142145996,142124760,142123415,142122245,142112682,142108190,142086256,142082185,142028914	Gene ID= ENSG00000109452.12 TPM= 4.25 Transcript Type= NA
chr4	142265864	142268344	142265864	142268344	+	transcript3649.chr4.nnic@NA	transcript3649.chr4.nnic	NA	142265864	142268344	Gene ID= novel_gene_chr4_3650 TPM= 10.62 Transcript Type= NA
chr4	142545941	142547571	142545941	142547571	-	transcript3651.chr4.nnic@NA	transcript3651.chr4.nnic	NA	142545941	142547571	Gene ID= novel_gene_chr4_3652 TPM= 2.12 Transcript Type= NA
chr4	142597361	142601595	142597361	142601595	+	transcript3653.chr4.nnic@NA	transcript3653.chr4.nnic	NA	142597361	142601595	Gene ID= novel_gene_chr4_3654 TPM= 7.44 Transcript Type= NA
chr4	142650561	142654387	142650561	142654387	+	transcript3658.chr4.nnic@NA	transcript3658.chr4.nnic	NA	142650561	142654387	Gene ID= novel_gene_chr4_3659 TPM= 7.44 Transcript Type= NA
chr4	143336762	143474568	143336762	143474568	+	ENST00000262995.8@GAB1	ENST00000262995.8	protein_coding	143336762,143415477,143433491,143437999,143439802,143440079,143457680,143459385,143460364,143466103,143469031	143337260,143415771,143433716,143438600,143439887,143440382,143457769,143459478,143460487,143466225,143474568	Gene ID= ENSG00000109458.8 TPM= 4.25 Transcript Type= protein_coding
chr4	143336879	143339052	143336879	143339052	+	transcript3680.chr4.nnic@NA	transcript3680.chr4.nnic	NA	143336879	143339052	Gene ID= novel_gene_chr4_3681 TPM= 2.12 Transcript Type= NA
chr4	143349275	143350117	143349275	143350117	-	ENST00000475555.1@AC097658.1	ENST00000475555.1	processed_pseudogene	143349275	143350117	Gene ID= ENSG00000228981.3 TPM= 2.12 Transcript Type= processed_pseudogene
chr4	143351244	143351614	143351244	143351614	-	transcript3684.chr4.nnic@NA	transcript3684.chr4.nnic	NA	143351244	143351614	Gene ID= novel_gene_chr4_3685 TPM= 3.19 Transcript Type= NA
chr4	143365260	143368189	143365260	143368189	+	transcript3674.chr4.nnic@NA	transcript3674.chr4.nnic	NA	143365260	143368189	Gene ID= novel_gene_chr4_3675 TPM= 5.31 Transcript Type= NA
chr4	143410051	143411672	143410051	143411672	-	transcript3682.chr4.nnic@NA	transcript3682.chr4.nnic	NA	143410051	143411672	Gene ID= novel_gene_chr4_3683 TPM= 2.12 Transcript Type= NA
chr4	143421771	143425991	143421771	143425991	+	transcript3676.chr4.nnic@NA	transcript3676.chr4.nnic	NA	143421771	143425991	Gene ID= novel_gene_chr4_3677 TPM= 3.19 Transcript Type= NA
chr4	143513439	143550057	143513439	143550057	+	transcript3691.chr4.nic@SMARCA5	transcript3691.chr4.nic	protein_coding	143513439,143517355,143521429,143524367,143525451,143526281,143527868,143528583,143530458,143534855,143536452,143538590,143538786,143540363,143543509,143543853,143544737,143545470,143545925,143546776,143547385,143547928,143549997	143514101,143517429,143521595,143524467,143525551,143526460,143528023,143528714,143530526,143534964,143536678,143538711,143538938,143540495,143543657,143543972,143544847,143545583,143546047,143546908,143547503,143548140,143550057	Gene ID= ENSG00000153147.5 TPM= 6.99 Transcript Type= NA
chr4	143559472	143561460	143559472	143561460	+	ENST00000510805.1@GUSBP5	ENST00000510805.1	transcribed_processed_pseudogene	143559472	143561460	Gene ID= ENSG00000236296.8 TPM= 1.06 Transcript Type= processed_transcript
chr4	144109304	144140751	144109304	144140751	-	ENST00000360771.8@GYPA	ENST00000360771.8	protein_coding	144140599,144120490,144119686,144118714,144116854,144114689,144109304	144140751,144120588,144119781,144118752,144116939,144114767,144111410	Gene ID= ENSG00000170180.20 TPM= 1.06 Transcript Type= protein_coding
chr4	144642922	144645987	144642922	144645987	-	ENST00000508269.1@HHIP-AS1	ENST00000508269.1	antisense_RNA	144645707,144642922	144645987,144643734	Gene ID= ENSG00000248890.1 TPM= 1.06 Transcript Type= antisense_RNA
chr4	144995161	145098219	144995161	145098219	-	transcript3710.chr4.nic@ANAPC10	transcript3710.chr4.nic	protein_coding	145098120,145095985,145081660,145064572,144999257,144995161	145098219,145096111,145081750,145064692,144999294,144995603	Gene ID= ENSG00000164162.13 TPM= 3.72 Transcript Type= NA
chr4	144995196	145098219	144995196	145098219	-	transcript3721.chr4.nic@ANAPC10	transcript3721.chr4.nic	protein_coding	145098120,145095985,145081660,144995196	145098219,145096111,145081750,144995603	Gene ID= ENSG00000164162.13 TPM= 6.9 Transcript Type= NA
chr4	144995158	145098213	144995158	145098213	-	ENST00000309439.9@ANAPC10	ENST00000309439.9	protein_coding	145098131,145095985,145081660,145064572,144995158	145098213,145096111,145081750,145064692,144995603	Gene ID= ENSG00000164162.13 TPM= 11.68 Transcript Type= protein_coding
chr4	144995196	145098191	144995196	145098191	-	ENST00000511466.5@ANAPC10	ENST00000511466.5	protein_coding	145098131,145095985,145081660,144995196	145098191,145096111,145081750,144995603	Gene ID= ENSG00000164162.13 TPM= 6.37 Transcript Type= processed_transcript
chr4	145097932	145129179	145097932	145129179	+	ENST00000296577.8@ABCE1	ENST00000296577.8	protein_coding	145097932,145104386,145105605,145108015,145109132,145110103,145110375,145110968,145112239,145117293,145119932,145121174,145121333,145123021,145123215,145123478,145124990,145127526	145098419,145104515,145105690,145108112,145109249,145110240,145110444,145111064,145112328,145117414,145120153,145121233,145121391,145123131,145123357,145123600,145125101,145129179	Gene ID= ENSG00000164163.10 TPM= 30.8 Transcript Type= protein_coding
chr4	145098273	145128047	145098273	145128047	+	transcript3727.chr4.nnic@ABCE1	transcript3727.chr4.nnic	protein_coding	145098273,145104386,145105605,145108015,145109132,145110103,145110375,145110968,145112239,145117293,145119968,145121174,145121333,145123021,145123215,145123478,145124990,145127526	145098419,145104515,145105690,145108112,145109249,145110240,145110444,145111064,145112328,145117414,145120153,145121233,145121391,145123131,145123357,145123600,145125101,145128047	Gene ID= ENSG00000164163.10 TPM= 2.12 Transcript Type= NA
chr4	145481650	145558079	145481650	145558079	+	transcript3736.chr4.nnic@SMAD1	transcript3736.chr4.nnic	protein_coding	145481650,145514438,145539804,145542582,145546703,145553784,145557791	145481744,145515013,145540061,145542698,145546924,145554040,145558079	Gene ID= ENSG00000170365.9 TPM= 2.12 Transcript Type= NA
chr4	145481792	145558079	145481792	145558079	+	ENST00000302085.8@SMAD1	ENST00000302085.8	protein_coding	145481792,145514438,145539804,145542582,145546703,145553784,145557791	145482038,145515013,145540061,145542698,145546924,145554040,145558079	Gene ID= ENSG00000170365.9 TPM= 13.81 Transcript Type= protein_coding
chr4	145618263	145660035	145618263	145660035	+	ENST00000281317.9@MMAA	ENST00000281317.9	protein_coding	145618263,145639075,145642363,145645986,145651062,145653994,145655147	145619407,145639578,145642485,145646156,145651147,145654143,145660035	Gene ID= ENSG00000151611.13 TPM= 2.12 Transcript Type= protein_coding
chr4	145757627	145938635	145757627	145938635	-	ENST00000508784.5@ZNF827	ENST00000508784.5	protein_coding	145938365,145902166,145892243,145885678,145870245,145849322,145845956,145823422,145779374,145775789,145774506,145765547,145764988,145763090,145757627	145938635,145903215,145892415,145886158,145870478,145849561,145846013,145823525,145779511,145775960,145774672,145765738,145765165,145763122,145761598	Gene ID= ENSG00000151612.15 TPM= 4.25 Transcript Type= protein_coding
chr4	145908801	145913445	145908801	145913445	+	transcript3746.chr4.nnic@NA	transcript3746.chr4.nnic	NA	145908801	145913445	Gene ID= novel_gene_chr4_3747 TPM= 4.25 Transcript Type= NA
chr4	145938624	145938906	145938624	145938906	-	transcript3748.chr4.nnic@NA	transcript3748.chr4.nnic	NA	145938624	145938906	Gene ID= novel_gene_chr4_3749 TPM= 4.25 Transcript Type= NA
chr4	146175685	146191535	146175685	146191535	+	ENST00000296581.10@LSM6	ENST00000296581.10	protein_coding	146175685,146182912,146187274,146189622	146175811,146183015,146187387,146191535	Gene ID= ENSG00000164167.10 TPM= 8.5 Transcript Type= protein_coding
chr4	146175729	146190046	146175729	146190046	+	ENST00000502781.5@LSM6	ENST00000502781.5	protein_coding	146175729,146182912,146187274,146189622	146176437,146183015,146187387,146190046	Gene ID= ENSG00000164167.10 TPM= 1.06 Transcript Type= protein_coding
chr4	147480932	147544954	147480932	147544954	+	ENST00000324300.9@EDNRA	ENST00000324300.9	protein_coding	147480932,147485612,147519851,147532506,147535877,147539817,147540377,147542478	147481376,147486101,147519978,147532704,147536029,147539950,147540485,147544954	Gene ID= ENSG00000151617.15 TPM= 16.99 Transcript Type= protein_coding
chr4	147480932	147486917	147480932	147486917	+	transcript3762.chr4.nic@EDNRA	transcript3762.chr4.nic	protein_coding	147480932,147485612	147481376,147486917	Gene ID= ENSG00000151617.15 TPM= 3.19 Transcript Type= NA
chr4	147617383	147636721	147617383	147636721	+	ENST00000296582.7@TMEM184C	ENST00000296582.7	protein_coding	147617383,147623834,147624062,147624804,147628361,147629599,147631393,147632903,147633765,147634169	147618079,147623964,147624098,147625009,147628435,147629692,147631505,147633002,147633936,147636721	Gene ID= ENSG00000164168.7 TPM= 2.12 Transcript Type= protein_coding
chr4	147637785	147684230	147637785	147684230	-	ENST00000322396.6@PRMT9	ENST00000322396.6	protein_coding	147683799,147680323,147673638,147672959,147670641,147668539,147660846,147657792,147653852,147642787,147638960,147637785	147684230,147680471,147673874,147673126,147670743,147668645,147661038,147657975,147654566,147642940,147639082,147638747	Gene ID= ENSG00000164169.12 TPM= 1.06 Transcript Type= protein_coding
chr4	147638385	147684125	147638385	147684125	-	ENST00000514886.1@PRMT9	ENST00000514886.1	protein_coding	147683799,147673638,147672959,147670641,147668539,147660846,147657792,147653852,147642787,147638960,147638385	147684125,147673874,147673126,147670743,147668645,147661038,147657975,147654566,147642940,147639082,147638747	Gene ID= ENSG00000164169.12 TPM= 2.12 Transcript Type= nonsense_mediated_decay
chr4	147732089	148072776	147732089	148072776	+	transcript3775.chr4.nic@ARHGAP10	transcript3775.chr4.nic	protein_coding	147732089,147822727,147822896,147847151,147857553,147864846,147866712,147875021,147879232,147881838,147906638,147909732,147913074,147939825,147946617,147955316,147965024,147966680,148023263,148046892,148064416,148071993	147732455,147822822,147822957,147847222,147857654,147864956,147866816,147875150,147879338,147881932,147906719,147909777,147913139,147939899,147946704,147955374,147965129,147966839,148023413,148047051,148064507,148072776	Gene ID= ENSG00000071205.11 TPM= 5.84 Transcript Type= NA
chr4	147732063	148072780	147732063	148072780	+	ENST00000336498.7@ARHGAP10	ENST00000336498.7	protein_coding	147732063,147822727,147822896,147847151,147857553,147864846,147866712,147875021,147879232,147881838,147906638,147909732,147913074,147939825,147946617,147955316,147965024,147966680,148023263,148046892,148063148,148064416,148071993	147732455,147822822,147822957,147847222,147857654,147864956,147866816,147875150,147879338,147881932,147906719,147909777,147913139,147939899,147946704,147955374,147965129,147966839,148023413,148047051,148063300,148064507,148072780	Gene ID= ENSG00000071205.11 TPM= 20.71 Transcript Type= protein_coding
chr4	148191056	148193063	148191056	148193063	-	transcript3784.chr4.nnic@NA	transcript3784.chr4.nnic	NA	148191056	148193063	Gene ID= novel_gene_chr4_3785 TPM= 2.12 Transcript Type= NA
chr4	148455235	148458401	148455235	148458401	-	transcript3788.chr4.nnic@NA	transcript3788.chr4.nnic	NA	148455235	148458401	Gene ID= novel_gene_chr4_3789 TPM= 3.19 Transcript Type= NA
chr4	148670686	148674706	148670686	148674706	-	transcript3790.chr4.nnic@NA	transcript3790.chr4.nnic	NA	148670686	148674706	Gene ID= novel_gene_chr4_3791 TPM= 2.12 Transcript Type= NA
chr4	150078274	150257457	150078274	150257457	+	ENST00000296550.11@DCLK2	ENST00000296550.11	protein_coding	150078274,150102478,150193138,150198002,150203795,150220703,150221677,150224501,150232337,150232682,150239742,150240399,150247603,150248305,150249568,150256020	150079448,150102812,150193240,150198103,150203889,150220778,150221785,150224558,150232456,150232828,150239875,150240476,150247699,150248385,150249684,150257457	Gene ID= ENSG00000170390.15 TPM= 21.59 Transcript Type= protein_coding
chr4	150078272	150240778	150078272	150240778	+	transcript3799.chr4.nic@DCLK2	transcript3799.chr4.nic	protein_coding	150078272,150102478,150193138,150198002,150203795,150220703,150221677,150224501,150232337,150232682,150239742	150079448,150102812,150193240,150198103,150203889,150220778,150221785,150224558,150232456,150232828,150240778	Gene ID= ENSG00000170390.15 TPM= 3.54 Transcript Type= NA
chr4	150078326	150104423	150078326	150104423	+	transcript3802.chr4.nic@DCLK2	transcript3802.chr4.nic	protein_coding	150078326,150102478	150079448,150104423	Gene ID= ENSG00000170390.15 TPM= 5.66 Transcript Type= NA
chr4	150264661	150343997	150264661	150343997	-	transcript3804.chr4.nnic@LRBA	transcript3804.chr4.nnic	protein_coding	150343934,150325809,150321191,150315561,150310229,150302625,150285933,150282450,150277853,150264661	150343997,150325898,150321368,150315623,150310384,150302792,150286034,150282646,150278004,150265812	Gene ID= ENSG00000198589.10 TPM= 6.37 Transcript Type= NA
chr4	150693694	150694474	150693694	150694474	+	transcript3805.chr4.nnic@NA	transcript3805.chr4.nnic	NA	150693694	150694474	Gene ID= novel_gene_chr4_3806 TPM= 2.12 Transcript Type= NA
chr4	151012829	151015727	151012829	151015727	-	ENST00000510841.1@LRBA	ENST00000510841.1	protein_coding	151015473,151012829	151015727,151014861	Gene ID= ENSG00000198589.10 TPM= 1.06 Transcript Type= retained_intron
chr4	151099573	151104652	151099573	151104652	+	ENST00000274065.8@RPS3A	ENST00000274065.8	protein_coding	151099573,151100485,151100975,151102871,151104177,151104472	151099714,151100588,151101162,151103079,151104286,151104652	Gene ID= ENSG00000145425.9 TPM= 784.41 Transcript Type= protein_coding
chr4	151099629	151104637	151099629	151104637	+	ENST00000514682.5@RPS3A	ENST00000514682.5	protein_coding	151099629,151100485,151100975,151102871,151104177,151104472	151099836,151100588,151101162,151103079,151104286,151104637	Gene ID= ENSG00000145425.9 TPM= 2.66 Transcript Type= protein_coding
chr4	151099624	151104637	151099624	151104637	+	ENST00000509736.5@RPS3A	ENST00000509736.5	protein_coding	151099624,151102871,151104177,151104472	151099714,151103079,151104286,151104637	Gene ID= ENSG00000145425.9 TPM= 3.19 Transcript Type= protein_coding
chr4	151120284	151325909	151120284	151325909	-	transcript3811.chr4.nic@SH3D19	transcript3811.chr4.nic	protein_coding	151325241,151226047,151187423,151179355,151176817,151176534,151174670,151165589,151159240,151149500,151147922,151144220,151143910,151139775,151137732,151135074,151133034,151132331,151128170,151127618,151120284	151325909,151226086,151187463,151179397,151176955,151176687,151175674,151165696,151159352,151149561,151148186,151144288,151144050,151139847,151137862,151135132,151133236,151132383,151128356,151127715,151122207	Gene ID= ENSG00000109686.17 TPM= 13.1 Transcript Type= NA
chr4	151120284	151325654	151120284	151325654	-	transcript3812.chr4.nic@SH3D19	transcript3812.chr4.nic	protein_coding	151325241,151226047,151187423,151181689,151179355,151176817,151176534,151174670,151165589,151159240,151149500,151147922,151143910,151139775,151137732,151135074,151133034,151132331,151128170,151127618,151120284	151325654,151226086,151187463,151181729,151179397,151176955,151176687,151175674,151165696,151159352,151149561,151148186,151144050,151139847,151137862,151135132,151133236,151132383,151128356,151127715,151122207	Gene ID= ENSG00000109686.17 TPM= 13.34 Transcript Type= NA
chr4	151120284	151325530	151120284	151325530	-	transcript3814.chr4.nnic@SH3D19	transcript3814.chr4.nnic	protein_coding	151325241,151324833,151226047,151187423,151179355,151176817,151176534,151174670,151165589,151159240,151149500,151147922,151143910,151139775,151137732,151135074,151133034,151132331,151128170,151127618,151120284	151325530,151324979,151226086,151187463,151179397,151176955,151176687,151175674,151165696,151159352,151149561,151148186,151144050,151139847,151137862,151135132,151133236,151132383,151128356,151127715,151122207	Gene ID= ENSG00000109686.17 TPM= 10.32 Transcript Type= NA
chr4	151120287	151228030	151120287	151228030	-	ENST00000514152.5@SH3D19	ENST00000514152.5	protein_coding	151227760,151226047,151187423,151179355,151176817,151176534,151174670,151165589,151159240,151149500,151147922,151143910,151139775,151137732,151135074,151133034,151132331,151128170,151127618,151120287	151228030,151226086,151187463,151179397,151176955,151176687,151175674,151165696,151159352,151149561,151148186,151144050,151139847,151137862,151135132,151133236,151132383,151128356,151127715,151122207	Gene ID= ENSG00000109686.17 TPM= 6.02 Transcript Type= protein_coding
chr4	151120284	151325625	151120284	151325625	-	transcript3826.chr4.nnic@SH3D19	transcript3826.chr4.nnic	protein_coding	151325241,151187423,151179355,151176817,151176534,151174670,151165589,151159240,151149500,151147922,151143910,151139775,151137732,151135074,151133034,151132331,151128170,151127618,151120284	151325625,151187463,151179397,151176955,151176687,151175674,151165696,151159352,151149561,151148186,151144050,151139847,151137862,151135132,151133236,151132383,151128356,151127715,151122207	Gene ID= ENSG00000109686.17 TPM= 11.39 Transcript Type= NA
chr4	151120284	151325572	151120284	151325572	-	transcript3827.chr4.nnic@SH3D19	transcript3827.chr4.nnic	protein_coding	151325241,151226047,151179355,151176817,151176534,151174670,151165589,151159240,151149500,151147922,151143910,151139775,151137732,151135074,151133034,151132331,151128170,151127618,151120284	151325572,151226086,151179397,151176955,151176687,151175674,151165696,151159352,151149561,151148186,151144050,151139847,151137862,151135132,151133236,151132383,151128356,151127715,151122207	Gene ID= ENSG00000109686.17 TPM= 10.15 Transcript Type= NA
chr4	151168400	151325909	151168400	151325909	-	transcript3840.chr4.nic@SH3D19	transcript3840.chr4.nic	protein_coding	151325241,151226047,151187423,151179355,151176817,151176534,151174670,151168400	151325909,151226086,151187463,151179397,151176955,151176687,151175674,151170791	Gene ID= ENSG00000109686.17 TPM= 3.37 Transcript Type= NA
chr4	151254282	151325620	151254282	151325620	-	transcript3851.chr4.nnic@SH3D19	transcript3851.chr4.nnic	protein_coding	151325241,151254282	151325620,151256368	Gene ID= ENSG00000109686.17 TPM= 10.62 Transcript Type= NA
chr4	151120287	151325632	151120287	151325632	-	ENST00000604030.6@SH3D19	ENST00000604030.6	protein_coding	151325241,151226047,151187423,151179355,151176817,151176534,151174670,151165589,151159240,151149500,151147922,151143910,151139775,151137732,151135074,151133034,151132331,151128170,151127618,151120287	151325632,151226086,151187463,151179397,151176955,151176687,151175674,151165696,151159352,151149561,151148186,151144050,151139847,151137862,151135132,151133236,151132383,151128356,151127715,151122207	Gene ID= ENSG00000109686.17 TPM= 25.14 Transcript Type= protein_coding
chr4	151251200	151255446	151251200	151255446	-	transcript3855.chr4.nnic@NA	transcript3855.chr4.nnic	NA	151251200	151255446	Gene ID= novel_gene_chr4_3856 TPM= 4.25 Transcript Type= NA
chr4	151315600	151318319	151315600	151318319	+	transcript3853.chr4.nnic@NA	transcript3853.chr4.nnic	NA	151315600	151318319	Gene ID= novel_gene_chr4_3854 TPM= 4.25 Transcript Type= NA
chr4	151664226	151670501	151664226	151670501	+	transcript3872.chr4.nnic@NA	transcript3872.chr4.nnic	NA	151664226	151670501	Gene ID= novel_gene_chr4_3873 TPM= 3.19 Transcript Type= NA
chr4	151670504	151761023	151670504	151761023	-	ENST00000263985.10@GATB	ENST00000263985.10	protein_coding	151760807,151758772,151719425,151716876,151716009,151707988,151705185,151703851,151701329,151688630,151679813,151672762,151670504	151761023,151758922,151719538,151717074,151716131,151708101,151705269,151703895,151701518,151688763,151679891,151672896,151671302	Gene ID= ENSG00000059691.11 TPM= 22.31 Transcript Type= protein_coding
chr4	151721946	151760990	151721946	151760990	-	ENST00000508611.1@GATB	ENST00000508611.1	protein_coding	151760807,151758772,151721946	151760990,151758922,151722215	Gene ID= ENSG00000059691.11 TPM= 3.19 Transcript Type= protein_coding
chr4	152322819	152536092	152322819	152536092	-	transcript3876.chr4.nnic@FBXW7	transcript3876.chr4.nnic	protein_coding	152535373,152535127,152534941,152412480,152411303,152350042,152346930,152337802,152332596,152330732,152329672,152328208,152326006,152324184,152322819	152536092,152535264,152535033,152412529,152411872,152350124,152347071,152337936,152332719,152330868,152329785,152328389,152326231,152324394,152323149	Gene ID= ENSG00000109670.13 TPM= 2.12 Transcript Type= NA
chr4	152321259	152536101	152321259	152536101	-	ENST00000281708.8@FBXW7	ENST00000281708.8	protein_coding	152534941,152411303,152350042,152346930,152337802,152332596,152330732,152329672,152328208,152326006,152324184,152321259	152536101,152411872,152350124,152347071,152337936,152332719,152330868,152329785,152328389,152326231,152324394,152323149	Gene ID= ENSG00000109670.13 TPM= 5.49 Transcript Type= protein_coding
chr4	152321263	152352971	152321263	152352971	-	ENST00000263981.9@FBXW7	ENST00000263981.9	protein_coding	152352470,152350042,152346930,152337802,152332596,152330732,152329672,152328208,152326006,152324184,152321263	152352971,152350124,152347071,152337936,152332719,152330868,152329785,152328389,152326231,152324394,152323149	Gene ID= ENSG00000109670.13 TPM= 2.84 Transcript Type= protein_coding
chr4	152322819	152382529	152322819	152382529	-	transcript3890.chr4.nic@FBXW7	transcript3890.chr4.nic	protein_coding	152382189,152350042,152346930,152337802,152332596,152330732,152329672,152328208,152324184,152322819	152382529,152350124,152347071,152337936,152332719,152330868,152329785,152328389,152326231,152323149	Gene ID= ENSG00000109670.13 TPM= 2.12 Transcript Type= NA
chr4	152343824	152382512	152343824	152382512	-	transcript3894.chr4.nic@FBXW7	transcript3894.chr4.nic	protein_coding	152382189,152350042,152343824	152382512,152350124,152347071	Gene ID= ENSG00000109670.13 TPM= 3.19 Transcript Type= NA
chr4	152321259	152382515	152321259	152382515	-	ENST00000296555.9@FBXW7	ENST00000296555.9	protein_coding	152382189,152350042,152346930,152337802,152332596,152330732,152329672,152328208,152326006,152324184,152321259	152382515,152350124,152347071,152337936,152332719,152330868,152329785,152328389,152326231,152324394,152323149	Gene ID= ENSG00000109670.13 TPM= 12.93 Transcript Type= protein_coding
chr4	152368365	152369077	152368365	152369077	+	transcript3900.chr4.nnic@NA	transcript3900.chr4.nnic	NA	152368365	152369077	Gene ID= novel_gene_chr4_3901 TPM= 2.12 Transcript Type= NA
chr4	152373823	152374140	152373823	152374140	+	transcript3896.chr4.nnic@NA	transcript3896.chr4.nnic	NA	152373823	152374140	Gene ID= novel_gene_chr4_3897 TPM= 3.19 Transcript Type= NA
chr4	152375117	152377612	152375117	152377612	+	transcript3898.chr4.nnic@NA	transcript3898.chr4.nnic	NA	152375117	152377612	Gene ID= novel_gene_chr4_3899 TPM= 4.25 Transcript Type= NA
chr4	152536264	152539263	152536264	152539263	+	ENST00000604157.1@LINC02486	ENST00000604157.1	lincRNA	152536264	152539263	Gene ID= ENSG00000268471.6 TPM= 3.19 Transcript Type= lincRNA
chr4	152618632	152680165	152618632	152680165	-	ENST00000304385.7@TMEM154	ENST00000304385.7	protein_coding	152679870,152652667,152652538,152644415,152643088,152640928,152618632	152680165,152652927,152652576,152644442,152643173,152640985,152628561	Gene ID= ENSG00000170006.11 TPM= 1.06 Transcript Type= protein_coding
chr4	152779937	152911909	152779937	152911909	+	ENST00000353617.6@ARFIP1	ENST00000353617.6	protein_coding	152779937,152829625,152863606,152870753,152872452,152880963,152882723,152888133,152910064	152780226,152829726,152863714,152870848,152872564,152881184,152882880,152888307,152911909	Gene ID= ENSG00000164144.15 TPM= 14.87 Transcript Type= protein_coding
chr4	152779937	152912357	152779937	152912357	+	ENST00000451320.6@ARFIP1	ENST00000451320.6	protein_coding	152779937,152829625,152863606,152870753,152872452,152880963,152882723,152888133,152910064	152780091,152829726,152863714,152870848,152872564,152881184,152882880,152888307,152912357	Gene ID= ENSG00000164144.15 TPM= 1.06 Transcript Type= protein_coding
chr4	153222484	153336362	153222484	153336362	+	transcript3917.chr4.nic@TRIM2	transcript3917.chr4.nic	protein_coding	153222484,153270335,153275893,153292982,153294305,153295313,153315485,153315832,153322648,153324078,153328530,153334814	153223039,153270519,153276130,153293133,153294485,153296036,153315588,153315999,153322816,153324148,153328670,153336362	Gene ID= ENSG00000109654.14 TPM= 7.44 Transcript Type= NA
chr4	153230020	153232536	153230020	153232536	+	transcript3923.chr4.nnic@NA	transcript3923.chr4.nnic	NA	153230020	153232536	Gene ID= novel_gene_chr4_3924 TPM= 4.25 Transcript Type= NA
chr4	153466349	153636711	153466349	153636711	+	ENST00000409959.7@TMEM131L	ENST00000409959.7	protein_coding	153466349,153467211,153473845,153550073,153555787,153556966,153558258,153580826,153581407,153583190,153583564,153584835,153585458,153586209,153587742,153588890,153591053,153592475,153593799,153596258,153598590,153602152,153602542,153603303,153603802,153612252,153620756,153621683,153622898,153626147,153627605,153632718,153634192,153635432,153636301	153466521,153467281,153473888,153550141,153555910,153557082,153558368,153580903,153581560,153583248,153583672,153584931,153585611,153586379,153587811,153589007,153591194,153592584,153593871,153596385,153598732,153602338,153602727,153603452,153604430,153612400,153620880,153621849,153623083,153626225,153627687,153632838,153634280,153635571,153636711	Gene ID= ENSG00000121210.15 TPM= 11.68 Transcript Type= protein_coding
chr4	153466349	153561955	153466349	153561955	+	transcript3935.chr4.nic@TMEM131L	transcript3935.chr4.nic	protein_coding	153466349,153467211,153473845,153550073,153555787,153556966,153558258	153466521,153467281,153473888,153550141,153555910,153557082,153561955	Gene ID= ENSG00000121210.15 TPM= 2.12 Transcript Type= NA
chr4	153780592	153789120	153780592	153789120	-	ENST00000274063.4@SFRP2	ENST00000274063.4	protein_coding	153788334,153785864,153780592	153789120,153785944,153781755	Gene ID= ENSG00000145423.4 TPM= 4.25 Transcript Type= protein_coding
chr4	154535006	154550435	154535006	154550435	-	ENST00000499023.6@PLRG1	ENST00000499023.6	protein_coding	154550300,154548829,154547711,154547011,154546123,154545836,154544445,154542187,154540785,154540594,154539951,154539105,154537969,154537286,154535006	154550435,154548935,154547853,154547064,154546213,154545923,154544546,154542279,154540934,154540695,154540053,154539213,154538108,154537479,154536744	Gene ID= ENSG00000171566.11 TPM= 3.19 Transcript Type= protein_coding
chr4	154536619	154550397	154536619	154550397	-	ENST00000302078.9@PLRG1	ENST00000302078.9	protein_coding	154550300,154548829,154547711,154547038,154546123,154545836,154544445,154542187,154540785,154540594,154539951,154539105,154537969,154537286,154536619	154550397,154548935,154547853,154547064,154546213,154545923,154544546,154542279,154540934,154540695,154540053,154539213,154538108,154537479,154536744	Gene ID= ENSG00000171566.11 TPM= 3.19 Transcript Type= protein_coding
chr4	154585260	154590766	154585260	154590766	-	ENST00000403106.7@FGA	ENST00000403106.7	protein_coding	154590634,154589437,154588793,154587512,154585260	154590766,154589562,154588976,154587657,154586918	Gene ID= ENSG00000171560.14 TPM= 1.06 Transcript Type= protein_coding
chr4	155342658	155376970	155342658	155376970	-	ENST00000311277.8@MAP9	ENST00000311277.8	protein_coding	155376771,155375776,155374937,155373136,155368586,155362048,155360168,155357449,155355716,155355071,155353179,155352912,155352596,155342658	155376970,155375914,155375021,155373456,155368812,155362141,155360415,155357519,155355884,155355160,155353340,155353057,155352728,155347905	Gene ID= ENSG00000164114.18 TPM= 2.12 Transcript Type= protein_coding
chr4	155495875	155565813	155495875	155565813	+	transcript3960.chr4.nnic@AC107208.1	transcript3960.chr4.nnic	lincRNA	155495875,155564221,155564923	155496474,155564334,155565813	Gene ID= ENSG00000251244.1 TPM= 2.12 Transcript Type= NA
chr4	155514100	155516627	155514100	155516627	-	transcript3961.chr4.nnic@NA	transcript3961.chr4.nnic	NA	155514100	155516627	Gene ID= novel_gene_chr4_3962 TPM= 4.25 Transcript Type= NA
chr4	155666711	155730432	155666711	155730432	+	ENST00000506455.5@GUCY1A3	ENST00000506455.5	protein_coding	155666711,155667346,155696756,155703932,155708236,155710542,155713098,155717159,155722038,155730030	155666965,155667419,155697122,155703993,155708294,155711251,155713583,155717302,155722192,155730432	Gene ID= ENSG00000164116.16 TPM= 7.22 Transcript Type= protein_coding
chr4	155666711	155730432	155666711	155730432	+	transcript3965.chr4.nic@GUCY1A3	transcript3965.chr4.nic	protein_coding	155666711,155667346,155696806,155703932,155708236,155710542,155713098,155717159,155722038,155730030	155666965,155667419,155697122,155703993,155708294,155711251,155713583,155717302,155722192,155730432	Gene ID= ENSG00000164116.16 TPM= 8.28 Transcript Type= NA
chr4	155667129	155732345	155667129	155732345	+	ENST00000393832.7@GUCY1A3	ENST00000393832.7	protein_coding	155667129,155667346,155696935,155703932,155708236,155710542,155713098,155717159,155722038,155730030	155667220,155667419,155697122,155703993,155708294,155711251,155713583,155717302,155722192,155732345	Gene ID= ENSG00000164116.16 TPM= 8.5 Transcript Type= protein_coding
chr4	155667662	155730432	155667662	155730432	+	transcript3974.chr4.nnic@GUCY1A3	transcript3974.chr4.nnic	protein_coding	155667662,155696806,155703932,155708236,155710542,155713098,155717159,155722038,155730030	155667932,155697122,155703993,155708294,155711251,155713583,155717302,155722192,155730432	Gene ID= ENSG00000164116.16 TPM= 4.04 Transcript Type= NA
chr4	155667663	155730432	155667663	155730432	+	ENST00000513574.1@GUCY1A3	ENST00000513574.1	protein_coding	155667663,155696756,155703932,155708236,155710542,155713098,155717159,155722038,155730030	155667932,155697122,155703993,155708294,155711251,155713583,155717302,155722192,155730432	Gene ID= ENSG00000164116.16 TPM= 8.28 Transcript Type= protein_coding
chr4	155667628	155730432	155667628	155730432	+	transcript3977.chr4.nnic@GUCY1A3	transcript3977.chr4.nnic	protein_coding	155667628,155703932,155708236,155710542,155713098,155717159,155722038,155730030	155667932,155703993,155708294,155711251,155713583,155717302,155722192,155730432	Gene ID= ENSG00000164116.16 TPM= 2.97 Transcript Type= NA
chr4	155676302	155679924	155676302	155679924	-	transcript3987.chr4.nnic@NA	transcript3987.chr4.nnic	NA	155676302	155679924	Gene ID= novel_gene_chr4_3988 TPM= 8.5 Transcript Type= NA
chr4	155733823	155737057	155733823	155737057	+	transcript3985.chr4.nnic@NA	transcript3985.chr4.nnic	NA	155733823	155737057	Gene ID= novel_gene_chr4_3986 TPM= 3.19 Transcript Type= NA
chr4	155759059	155807591	155759059	155807591	+	ENST00000264424.12@GUCY1B3	ENST00000264424.12	protein_coding	155759059,155759787,155774968,155777524,155789714,155793856,155795341,155796377,155799877,155802342,155803624,155804593,155805103,155806386	155759143,155759860,155775068,155777642,155789911,155794086,155795457,155796510,155800074,155802579,155803764,155804747,155805229,155807591	Gene ID= ENSG00000061918.12 TPM= 33.99 Transcript Type= protein_coding
chr4	155903695	155920406	155903695	155920406	+	ENST00000536354.2@TDO2	ENST00000536354.2	protein_coding	155903695,155904018,155905067,155907722,155908887,155910025,155911497,155914323,155915855,155917395,155918149,155919837	155903793,155904123,155905157,155907792,155909014,155910211,155911604,155914434,155915912,155917474,155918239,155920406	Gene ID= ENSG00000151790.8 TPM= 1.06 Transcript Type= protein_coding
chr4	155924118	155953917	155924118	155953917	-	ENST00000433477.3@CTSO	ENST00000433477.3	protein_coding	155953713,155943156,155942317,155939371,155937362,155929542,155928336,155924118	155953917,155943264,155942456,155939538,155937483,155929705,155928428,155926070	Gene ID= ENSG00000256043.2 TPM= 10.62 Transcript Type= protein_coding
chr4	155937610	155953861	155937610	155953861	-	transcript4001.chr4.nic@CTSO	transcript4001.chr4.nic	protein_coding	155953713,155943156,155942317,155937610	155953861,155943264,155942456,155939538	Gene ID= ENSG00000256043.2 TPM= 2.12 Transcript Type= NA
chr4	156874723	156877841	156874723	156877841	-	transcript4006.chr4.nnic@NA	transcript4006.chr4.nnic	NA	156874723	156877841	Gene ID= novel_gene_chr4_4007 TPM= 2.12 Transcript Type= NA
chr4	157076057	157172090	157076057	157172090	+	ENST00000264428.8@GLRB	ENST00000264428.8	protein_coding	157076057,157077996,157120556,157122330,157136469,157136804,157138809,157143807,157152718,157170432	157076297,157078146,157120662,157122397,157136698,157136886,157138949,157143959,157153010,157172090	Gene ID= ENSG00000109738.10 TPM= 66.92 Transcript Type= protein_coding
chr4	157076125	157172090	157076125	157172090	+	ENST00000541722.5@GLRB	ENST00000541722.5	protein_coding	157076125,157077996,157120556,157122330,157136469,157136804,157138809,157143807,157170432	157076297,157078146,157120662,157122397,157136698,157136886,157138949,157143959,157172090	Gene ID= ENSG00000109738.10 TPM= 1.06 Transcript Type= protein_coding
chr4	158124604	158172736	158124604	158172736	-	ENST00000296530.12@FAM198B	ENST00000296530.12	protein_coding	158172339,158170466,158155611,158130786,158124604	158172736,158171599,158155825,158131012,158127614	Gene ID= ENSG00000164125.15 TPM= 19.12 Transcript Type= protein_coding
chr4	158169913	158172695	158169913	158172695	-	transcript4033.chr4.nic@FAM198B	transcript4033.chr4.nic	protein_coding	158172339,158169913	158172695,158171599	Gene ID= ENSG00000164125.15 TPM= 2.12 Transcript Type= NA
chr4	158258769	158259609	158258769	158259609	+	transcript4046.chr4.nnic@NA	transcript4046.chr4.nnic	NA	158258769	158259609	Gene ID= novel_gene_chr4_4047 TPM= 2.12 Transcript Type= NA
chr4	158666679	158672046	158666679	158672046	-	ENST00000379205.4@C4orf46	ENST00000379205.4	protein_coding	158671616,158666679	158672046,158669768	Gene ID= ENSG00000205208.4 TPM= 6.37 Transcript Type= protein_coding
chr4	158672125	158709623	158672125	158709623	+	ENST00000511912.5@ETFDH	ENST00000511912.5	protein_coding	158672125,158680467,158682195,158684592,158685101,158690348,158695497,158697559,158698987,158703423,158706189,158706629,158708364	158672490,158680607,158682424,158684673,158685219,158690425,158695643,158697699,158699130,158703591,158706371,158706850,158709623	Gene ID= ENSG00000171503.11 TPM= 208.18 Transcript Type= protein_coding
chr4	158672318	158672844	158672318	158672844	+	transcript4076.chr4.nnic@NA	transcript4076.chr4.nnic	NA	158672318	158672844	Gene ID= novel_gene_chr4_4077 TPM= 2.12 Transcript Type= NA
chr4	158709048	158710759	158709048	158710759	+	transcript4074.chr4.nnic@NA	transcript4074.chr4.nnic	NA	158709048	158710759	Gene ID= novel_gene_chr4_4075 TPM= 2.12 Transcript Type= NA
chr4	158709134	158723396	158709134	158723396	-	ENST00000307720.3@PPID	ENST00000307720.3	protein_coding	158723204,158721343,158719180,158717012,158715562,158715297,158713119,158710762,158710628,158709134	158723396,158721483,158719286,158717200,158715684,158715403,158713260,158710848,158710670,158709824	Gene ID= ENSG00000171497.4 TPM= 98.78 Transcript Type= protein_coding
chr4	158768915	158905710	158768915	158905710	+	transcript4079.chr4.nic@FNIP2	transcript4079.chr4.nic	protein_coding	158768915,158825916,158829079,158831861,158832067,158833528,158833801,158835405,158851321,158859057,158859578,158861342,158861607,158868102,158870313,158891446,158895750,158904466	158769319,158826042,158829225,158831961,158832138,158833628,158833890,158835476,158851450,158859258,158859666,158861488,158861776,158869428,158870469,158891646,158895865,158905710	Gene ID= ENSG00000052795.12 TPM= 10.09 Transcript Type= NA
chr4	158841768	158905710	158841768	158905710	+	transcript4083.chr4.nnic@FNIP2	transcript4083.chr4.nnic	protein_coding	158841768,158851321,158859057,158859578,158861342,158861607,158868102,158870313,158891446,158895750,158904466	158841952,158851450,158859258,158859666,158861488,158861776,158869428,158870469,158891646,158895865,158905710	Gene ID= ENSG00000052795.12 TPM= 6.9 Transcript Type= NA
chr4	158866223	158869297	158866223	158869297	-	transcript4091.chr4.nnic@NA	transcript4091.chr4.nnic	NA	158866223	158869297	Gene ID= novel_gene_chr4_4092 TPM= 4.25 Transcript Type= NA
chr4	159267737	159360169	159267737	159360169	+	ENST00000264431.8@RAPGEF2	ENST00000264431.8	protein_coding	159267737,159304342,159314591,159322347,159323459,159329858,159330334,159331431,159331630,159331926,159332451,159338311,159339114,159341564,159342979,159343281,159344036,159345106,159346789,159350137,159352685,159353487,159355853,159358114	159268215,159304473,159314768,159322483,159323617,159330010,159330498,159331538,159331833,159332034,159332697,159338468,159339354,159341947,159343190,159343404,159344059,159345329,159346998,159350289,159352910,159354046,159356158,159360169	Gene ID= ENSG00000109756.8 TPM= 18.06 Transcript Type= protein_coding
chr4	163124576	163129033	163124576	163129033	-	transcript4107.chr4.nnic@NA	transcript4107.chr4.nnic	NA	163124576	163129033	Gene ID= novel_gene_chr4_4108 TPM= 3.19 Transcript Type= NA
chr4	163494461	163520539	163494461	163520539	+	ENST00000358572.9@TMA16	ENST00000358572.9	protein_coding	163494461,163507033,163512822,163514074,163515313,163517434,163519334	163494804,163507145,163512859,163514158,163515461,163517476,163520539	Gene ID= ENSG00000198498.9 TPM= 14.87 Transcript Type= protein_coding
chr4	164956948	164959122	164956948	164959122	+	ENST00000513876.3@FAM218A	ENST00000513876.3	protein_coding	164956948	164959122	Gene ID= ENSG00000250486.3 TPM= 1.06 Transcript Type= protein_coding
chr4	164968284	164977615	164968284	164977615	-	transcript4115.chr4.nic@TRIM61	transcript4115.chr4.nic	protein_coding	164977531,164976688,164968284	164977615,164976825,164970339	Gene ID= ENSG00000183439.7 TPM= 2.12 Transcript Type= NA
chr4	165070608	165112919	165070608	165112919	-	ENST00000306480.10@TMEM192	ENST00000306480.10	protein_coding	165112747,165102950,165100628,165088468,165085586,165070608	165112919,165103096,165100892,165088602,165085688,165079796	Gene ID= ENSG00000170088.13 TPM= 2.12 Transcript Type= protein_coding
chr4	165207754	165323153	165207754	165323153	+	transcript4126.chr4.nic@KLHL2	transcript4126.chr4.nic	protein_coding	165207754,165219934,165228807,165263197,165294359,165297609,165299507,165305608,165310553,165311464,165313238,165314026,165317826,165322032	165207902,165220059,165228913,165263359,165294468,165297725,165299656,165305725,165310750,165311565,165313366,165314166,165317969,165323153	Gene ID= ENSG00000109466.13 TPM= 2.12 Transcript Type= NA
chr4	165207618	165323153	165207618	165323153	+	ENST00000226725.10@KLHL2	ENST00000226725.10	protein_coding	165207618,165219934,165228807,165238778,165263197,165294359,165297609,165299507,165305608,165310553,165311464,165313238,165314026,165317826,165322032	165207902,165220059,165228913,165238899,165263359,165294468,165297725,165299656,165305725,165310750,165311565,165313366,165314166,165317969,165323153	Gene ID= ENSG00000109466.13 TPM= 13.81 Transcript Type= protein_coding
chr4	165327623	165343160	165327623	165343160	+	ENST00000261507.10@MSMO1	ENST00000261507.10	protein_coding	165327623,165333340,165337789,165338652,165340221,165341751	165327764,165333625,165337937,165338778,165340375,165343160	Gene ID= ENSG00000052802.12 TPM= 57.89 Transcript Type= protein_coding
chr4	165327686	165343029	165327686	165343029	+	ENST00000393766.6@MSMO1	ENST00000393766.6	protein_coding	165327686,165337789,165338652,165340221,165341751	165327764,165337937,165338778,165340375,165343029	Gene ID= ENSG00000052802.12 TPM= 5.84 Transcript Type= protein_coding
chr4	165378942	165498320	165378942	165498320	+	ENST00000402744.8@CPE	ENST00000402744.8	protein_coding	165378942,165464390,165467688,165482242,165484422,165487438,165493171,165495559,165497512	165379528,165464586,165467855,165482359,165484604,165487577,165493270,165495677,165498320	Gene ID= ENSG00000109472.13 TPM= 66.92 Transcript Type= protein_coding
chr4	168470327	168480491	168470327	168480491	-	transcript4146.chr4.nic@DDX60L	transcript4146.chr4.nic	protein_coding	168480195,168472696,168472455,168471747,168470327	168480491,168472809,168472524,168471936,168470837	Gene ID= ENSG00000181381.13 TPM= 2.12 Transcript Type= NA
chr4	168832008	168928457	168832008	168928457	+	transcript4165.chr4.nic@PALLD	transcript4165.chr4.nic	protein_coding	168832008,168877723,168890922,168894579,168896549,168898493,168903757,168913927,168915895,168921534,168924255,168924945,168925233,168926213	168832171,168878394,168891057,168894677,168896599,168898714,168903906,168914021,168916027,168921741,168924420,168925078,168925278,168928457	Gene ID= ENSG00000129116.17 TPM= 107.27 Transcript Type= NA
chr4	168497066	168928457	168497066	168928457	+	ENST00000261509.10@PALLD	ENST00000261509.10	protein_coding	168497066,168511423,168668190,168681332,168682998,168685485,168690603,168691269,168709028,168711581,168890922,168894579,168898493,168903757,168913927,168915895,168921534,168924255,168924945,168925233,168926213	168497194,168512412,168668368,168681398,168683103,168685559,168690744,168691292,168709147,168711923,168891057,168894677,168898714,168903906,168914021,168916027,168921741,168924420,168925078,168925278,168928457	Gene ID= ENSG00000129116.17 TPM= 43.55 Transcript Type= protein_coding
chr4	168832041	168928445	168832041	168928445	+	ENST00000507735.5@PALLD	ENST00000507735.5	protein_coding	168832041,168877723,168890922,168894579,168898493,168903757,168913927,168915895,168921534,168924255,168924945,168926213	168832171,168878394,168891057,168894677,168898714,168903906,168914021,168916027,168921741,168924420,168925078,168928445	Gene ID= ENSG00000129116.17 TPM= 32.1 Transcript Type= protein_coding
chr4	168584217	168589540	168584217	168589540	-	transcript4214.chr4.nnic@NA	transcript4214.chr4.nnic	NA	168584217	168589540	Gene ID= novel_gene_chr4_4215 TPM= 3.19 Transcript Type= NA
chr4	168713944	168716582	168713944	168716582	-	transcript4208.chr4.nnic@NA	transcript4208.chr4.nnic	NA	168713944	168716582	Gene ID= novel_gene_chr4_4209 TPM= 35.05 Transcript Type= NA
chr4	168738447	168742985	168738447	168742985	-	transcript4210.chr4.nnic@NA	transcript4210.chr4.nnic	NA	168738447	168742985	Gene ID= novel_gene_chr4_4211 TPM= 6.37 Transcript Type= NA
chr4	168770804	168772827	168770804	168772827	+	transcript4206.chr4.nnic@NA	transcript4206.chr4.nnic	NA	168770804	168772827	Gene ID= novel_gene_chr4_4207 TPM= 3.19 Transcript Type= NA
chr4	168795712	168798030	168795712	168798030	-	transcript4212.chr4.nnic@NA	transcript4212.chr4.nnic	NA	168795712	168798030	Gene ID= novel_gene_chr4_4213 TPM= 3.19 Transcript Type= NA
chr4	168987593	169010199	168987593	169010199	-	transcript4217.chr4.nnic@CBR4	transcript4217.chr4.nnic	protein_coding	169009948,169007636,169006755,169002071,168998202,168987593	169010199,169007756,169006891,169002205,168998285,168990328	Gene ID= ENSG00000145439.11 TPM= 2.12 Transcript Type= NA
chr4	168987590	169010258	168987590	169010258	-	ENST00000306193.7@CBR4	ENST00000306193.7	protein_coding	169009948,169007636,169006755,169002071,168987590	169010258,169007756,169006891,169002205,168990328	Gene ID= ENSG00000145439.11 TPM= 19.12 Transcript Type= protein_coding
chr4	169001169	169010254	169001169	169010254	-	ENST00000504480.5@CBR4	ENST00000504480.5	protein_coding	169009948,169007636,169006755,169001169	169010254,169007756,169006891,169002205	Gene ID= ENSG00000145439.11 TPM= 3.19 Transcript Type= protein_coding
chr4	169094256	169271105	169094256	169271105	-	ENST00000284637.13@SH3RF1	ENST00000284637.13	protein_coding	169270859,169268820,169156404,169155480,169136318,169130046,169122100,169120819,169117523,169116269,169106847,169094256	169271105,169269307,169156679,169155575,169136620,169130156,169122266,169120989,169117782,169116630,169107205,169096687	Gene ID= ENSG00000154447.14 TPM= 9.56 Transcript Type= protein_coding
chr4	169393395	169612629	169393395	169612629	-	ENST00000507142.5@NEK1	ENST00000507142.5	protein_coding	169612222,169612020,169602514,169602008,169599100,169590726,169589447,169588649,169587559,169585349,169580842,169576928,169562137,169561832,169561687,169561480,169555932,169555720,169537809,169508769,169508248,169507715,169507037,169479403,169477432,169477124,169463243,169438083,169433545,169426146,169424553,169406596,169401652,169400521,169400225,169393395	169612629,169612143,169602678,169602104,169599197,169590809,169589514,169588735,169587613,169585549,169580902,169577079,169562196,169561891,169561737,169561554,169556095,169555851,169537911,169508852,169508331,169507792,169507132,169479534,169477497,169477352,169463395,169438259,169433665,169426234,169424800,169406747,169401860,169400651,169400357,169394523	Gene ID= ENSG00000137601.16 TPM= 3.19 Transcript Type= protein_coding
chr4	169620526	169720545	169620526	169720545	+	ENST00000347613.8@CLCN3	ENST00000347613.8	protein_coding	169620526,169635913,169680050,169687658,169689043,169690530,169692114,169695612,169697189,169703998,169706868,169713079,169717792,169719907	169621063,169636088,169680207,169687757,169689230,169690652,169692320,169695692,169697734,169704184,169707266,169713295,169717867,169720545	Gene ID= ENSG00000109572.13 TPM= 1.06 Transcript Type= protein_coding
chr4	169620521	169723673	169620521	169723673	+	ENST00000513761.5@CLCN3	ENST00000513761.5	protein_coding	169620521,169635913,169680050,169687658,169689043,169690530,169692114,169695612,169697189,169703998,169706868,169713079,169719907	169621063,169636088,169680207,169687757,169689230,169690652,169692320,169695692,169697734,169704184,169707266,169713295,169723673	Gene ID= ENSG00000109572.13 TPM= 3.19 Transcript Type= protein_coding
chr4	169660062	169723187	169660062	169723187	+	ENST00000613795.4@CLCN3	ENST00000613795.4	protein_coding	169660062,169680050,169687658,169689043,169690530,169692114,169695612,169697189,169703998,169706868,169713079,169719907	169660448,169680207,169687757,169689230,169690652,169692320,169695692,169697734,169704184,169707266,169713295,169723187	Gene ID= ENSG00000109572.13 TPM= 10.62 Transcript Type= protein_coding
chr4	169729465	169757953	169729465	169757953	-	ENST00000393381.2@HPF1	ENST00000393381.2	protein_coding	169757830,169753676,169750536,169748744,169741957,169737660,169731704,169729465	169757953,169753835,169750725,169748842,169742107,169737747,169731876,169729709	Gene ID= ENSG00000056050.6 TPM= 28.68 Transcript Type= protein_coding
chr4	173164331	173169658	173164331	173169658	-	transcript4258.chr4.nnic@AC105285.1	transcript4258.chr4.nnic	antisense_RNA	173168864,173167962,173166645,173166124,173165992,173164978,173164331	173169658,173168113,173166790,173166299,173166043,173165132,173164707	Gene ID= ENSG00000245213.6 TPM= 2.12 Transcript Type= NA
chr4	173168768	173321718	173168768	173321718	+	transcript4256.chr4.nic@GALNT7	transcript4256.chr4.nic	protein_coding	173168768,173247980,173292108,173295396,173295764,173297795,173302047,173303996,173313958,173317634,173318431,173321580	173168961,173248440,173292274,173295526,173295843,173297977,173302164,173304118,173314176,173317732,173318559,173321718	Gene ID= ENSG00000109586.11 TPM= 3.19 Transcript Type= NA
chr4	173168753	173323967	173168753	173323967	+	ENST00000265000.8@GALNT7	ENST00000265000.8	protein_coding	173168753,173247980,173292108,173295396,173295764,173298115,173302047,173303996,173313958,173317634,173318431,173321580	173168961,173248440,173292274,173295526,173295843,173298297,173302164,173304118,173314176,173317732,173318559,173323967	Gene ID= ENSG00000109586.11 TPM= 2.12 Transcript Type= protein_coding
chr4	173331701	173334066	173331701	173334066	-	transcript4262.chr4.nnic@HMGB2	transcript4262.chr4.nnic	protein_coding	173333857,173333500,173333069,173332821,173331701	173334066,173333669,173333214,173332995,173332238	Gene ID= ENSG00000164104.11 TPM= 5.31 Transcript Type= NA
chr4	173331701	173334391	173331701	173334391	-	ENST00000446922.6@HMGB2	ENST00000446922.6	protein_coding	173334246,173333500,173333069,173332821,173331701	173334391,173333669,173333214,173332995,173332238	Gene ID= ENSG00000164104.11 TPM= 4.25 Transcript Type= protein_coding
chr4	173331695	173335125	173331695	173335125	-	ENST00000296503.9@HMGB2	ENST00000296503.9	protein_coding	173334272,173333500,173333069,173332821,173331695	173335125,173333669,173333214,173332995,173332238	Gene ID= ENSG00000164104.11 TPM= 30.8 Transcript Type= protein_coding
chr4	173370943	173377532	173370943	173377532	+	ENST00000296504.3@SAP30	ENST00000296504.3	protein_coding	173370943,173373390,173373939,173377205	173371497,173373515,173374037,173377532	Gene ID= ENSG00000164105.3 TPM= 44.61 Transcript Type= protein_coding
chr4	173384701	173399536	173384701	173399536	-	ENST00000296506.7@SCRG1	ENST00000296506.7	protein_coding	173399068,173391173,173384701	173399536,173391428,173388395	Gene ID= ENSG00000164106.7 TPM= 4.25 Transcript Type= protein_coding
chr4	173508683	173510957	173508683	173510957	+	transcript4279.chr4.nnic@NA	transcript4279.chr4.nnic	NA	173508683,173510332	173509842,173510957	Gene ID= novel_gene_chr4_4280 TPM= 10.62 Transcript Type= NA
chr4	173509629	173511790	173509629	173511790	+	transcript4281.chr4.nnic@NA	transcript4281.chr4.nnic	NA	173509629,173510332	173509842,173511790	Gene ID= novel_gene_chr4_4280 TPM= 18.06 Transcript Type= NA
chr4	173508620	173511801	173508620	173511801	+	transcript4283.chr4.nnic@NA	transcript4283.chr4.nnic	NA	173508620	173511801	Gene ID= novel_gene_chr4_4280 TPM= 4.25 Transcript Type= NA
chr4	173519612	173523810	173519612	173523810	-	transcript4363.chr4.nnic@NA	transcript4363.chr4.nnic	NA	173519612	173523810	Gene ID= novel_gene_chr4_4364 TPM= 4.25 Transcript Type= NA
chr4	173524294	173525308	173524294	173525308	-	transcript4375.chr4.nnic@NA	transcript4375.chr4.nnic	NA	173524294	173525308	Gene ID= novel_gene_chr4_4376 TPM= 2.12 Transcript Type= NA
chr4	173526501	173530229	173526501	173530229	-	transcript4324.chr4.nnic@HAND2	transcript4324.chr4.nnic	protein_coding	173529903,173528735,173526501	173530229,173529202,173527375	Gene ID= ENSG00000164107.8 TPM= 31.9 Transcript Type= NA
chr4	173526091	173530229	173526091	173530229	-	ENST00000359562.4@HAND2	ENST00000359562.4	protein_coding	173528735,173526091	173530229,173527375	Gene ID= ENSG00000164107.8 TPM= 19.65 Transcript Type= protein_coding
chr4	173526608	173529354	173526608	173529354	-	transcript4371.chr4.nnic@NA	transcript4371.chr4.nnic	NA	173526608	173529354	Gene ID= novel_gene_chr4_4372 TPM= 5.84 Transcript Type= NA
chr4	173530471	173583375	173530471	173583375	+	transcript4294.chr4.nic@HAND2-AS1	transcript4294.chr4.nic	antisense_RNA	173530471,173530967,173536848,173582705	173530539,173531078,173536970,173583375	Gene ID= ENSG00000237125.8 TPM= 3.19 Transcript Type= NA
chr4	173530547	173539485	173530547	173539485	+	transcript4299.chr4.nic@HAND2-AS1	transcript4299.chr4.nic	antisense_RNA	173530547,173530967,173536848,173538063	173530632,173531078,173536970,173539485	Gene ID= ENSG00000237125.8 TPM= 6.37 Transcript Type= NA
chr4	173530460	173539485	173530460	173539485	+	transcript4310.chr4.nic@HAND2-AS1	transcript4310.chr4.nic	antisense_RNA	173530460,173536848,173538063	173530539,173536970,173539485	Gene ID= ENSG00000237125.8 TPM= 6.37 Transcript Type= NA
chr4	173531503	173538973	173531503	173538973	+	transcript4317.chr4.nic@HAND2-AS1	transcript4317.chr4.nic	antisense_RNA	173531503,173536848,173538063	173531781,173536970,173538973	Gene ID= ENSG00000237125.8 TPM= 2.12 Transcript Type= NA
chr4	173530737	173583394	173530737	173583394	+	transcript4344.chr4.nic@HAND2-AS1	transcript4344.chr4.nic	antisense_RNA	173530737,173582705	173531078,173583394	Gene ID= ENSG00000237125.8 TPM= 2.12 Transcript Type= NA
chr4	173530737	173583569	173530737	173583569	+	transcript4345.chr4.nic@HAND2-AS1	transcript4345.chr4.nic	antisense_RNA	173530737,173582705	173531078,173583569	Gene ID= ENSG00000237125.8 TPM= 4.25 Transcript Type= NA
chr4	173530371	173538973	173530371	173538973	+	ENST00000514673.5@HAND2-AS1	ENST00000514673.5	antisense_RNA	173530371,173530967,173536848,173538063	173530539,173531078,173536970,173538973	Gene ID= ENSG00000237125.8 TPM= 9.56 Transcript Type= antisense_RNA
chr4	173530425	173532671	173530425	173532671	+	transcript4355.chr4.nnic@NA	transcript4355.chr4.nnic	NA	173530425	173532671	Gene ID= novel_gene_chr4_4356 TPM= 3.19 Transcript Type= NA
chr4	173538860	173541829	173538860	173541829	+	transcript4351.chr4.nnic@NA	transcript4351.chr4.nnic	NA	173538860	173541829	Gene ID= novel_gene_chr4_4352 TPM= 5.31 Transcript Type= NA
chr4	173543235	173547741	173543235	173547741	+	transcript4357.chr4.nnic@NA	transcript4357.chr4.nnic	NA	173543235	173547741	Gene ID= novel_gene_chr4_4358 TPM= 3.19 Transcript Type= NA
chr4	173549445	173554830	173549445	173554830	-	transcript4361.chr4.nnic@NA	transcript4361.chr4.nnic	NA	173549445	173554830	Gene ID= novel_gene_chr4_4362 TPM= 7.44 Transcript Type= NA
chr4	173584505	173584601	173584505	173584601	-	transcript4365.chr4.nnic@NA	transcript4365.chr4.nnic	NA	173584505	173584601	Gene ID= novel_gene_chr4_4366 TPM= 4.25 Transcript Type= NA
chr4	173585234	173589249	173585234	173589249	+	transcript4353.chr4.nnic@NA	transcript4353.chr4.nnic	NA	173585234	173589249	Gene ID= novel_gene_chr4_4354 TPM= 32.93 Transcript Type= NA
chr4	173694264	173699017	173694264	173699017	-	transcript4395.chr4.nnic@NA	transcript4395.chr4.nnic	NA	173698715,173694264	173699017,173697514	Gene ID= novel_gene_chr4_4396 TPM= 2.12 Transcript Type= NA
chr4	173697128	173699017	173697128	173699017	-	transcript4399.chr4.nnic@NA	transcript4399.chr4.nnic	NA	173698715,173697128	173699017,173697514	Gene ID= novel_gene_chr4_4400 TPM= 5.31 Transcript Type= NA
chr4	173702480	173703057	173702480	173703057	+	transcript4403.chr4.nnic@NA	transcript4403.chr4.nnic	NA	173702480	173703057	Gene ID= novel_gene_chr4_4404 TPM= 2.12 Transcript Type= NA
chr4	174102703	174107398	174102703	174107398	+	transcript4401.chr4.nnic@NA	transcript4401.chr4.nnic	NA	174102703	174107398	Gene ID= novel_gene_chr4_4402 TPM= 3.19 Transcript Type= NA
chr4	174149557	174154659	174149557	174154659	-	transcript4405.chr4.nnic@NA	transcript4405.chr4.nnic	NA	174149557	174154659	Gene ID= novel_gene_chr4_4406 TPM= 2.12 Transcript Type= NA
chr4	174236658	174284264	174236658	174284264	-	ENST00000393674.6@FBXO8	ENST00000393674.6	protein_coding	174283410,174262764,174259699,174241100,174238994,174236658	174284264,174263100,174259825,174241218,174239190,174237599	Gene ID= ENSG00000164117.13 TPM= 8.5 Transcript Type= protein_coding
chr4	176184638	176195671	176184638	176195671	-	ENST00000280191.6@SPATA4	ENST00000280191.6	protein_coding	176195345,176193453,176192958,176192627,176188119,176184638	176195671,176193582,176193076,176192847,176188235,176184892	Gene ID= ENSG00000150628.6 TPM= 1.06 Transcript Type= protein_coding
chr4	176319877	176332243	176319877	176332243	+	transcript4439.chr4.nnic@SPCS3	transcript4439.chr4.nnic	protein_coding	176319877,176322170,176324181,176327162,176328198,176331193	176320219,176322243,176324257,176327277,176331072,176332243	Gene ID= ENSG00000129128.12 TPM= 19.12 Transcript Type= NA
chr4	176319964	176332245	176319964	176332245	+	ENST00000503362.1@SPCS3	ENST00000503362.1	protein_coding	176319964,176322170,176324181,176327162,176328198	176320219,176322243,176324257,176327277,176332245	Gene ID= ENSG00000129128.12 TPM= 87.1 Transcript Type= protein_coding
chr4	176319991	176328406	176319991	176328406	+	ENST00000507678.5@SPCS3	ENST00000507678.5	protein_coding	176319991,176324181,176327162,176328198	176322243,176324257,176327277,176328406	Gene ID= ENSG00000129128.12 TPM= 2.12 Transcript Type= retained_intron
chr4	176681712	176683837	176681712	176683837	-	transcript4461.chr4.nnic@NA	transcript4461.chr4.nnic	NA	176681712	176683837	Gene ID= novel_gene_chr4_4462 TPM= 2.12 Transcript Type= NA
chr4	176683538	176792727	176683538	176792727	-	ENST00000618562.1@VEGFC	ENST00000618562.1	protein_coding	176792165,176729533,176727778,176711499,176687821,176687187,176683538	176792727,176729746,176727968,176711650,176687927,176687520,176684040	Gene ID= ENSG00000150630.3 TPM= 7.44 Transcript Type= protein_coding
chr4	177430770	177442503	177430770	177442503	-	ENST00000264595.6@AGA	ENST00000264595.6	protein_coding	177442249,177440273,177439576,177438745,177437405,177436276,177434382,177433214,177430770	177442503,177440426,177439688,177438857,177437519,177436351,177434489,177433347,177431808	Gene ID= ENSG00000038002.8 TPM= 1.06 Transcript Type= protein_coding
chr4	181257726	181265047	181257726	181265047	-	transcript4470.chr4.nnic@LINC02500	transcript4470.chr4.nnic	lincRNA	181264945,181263821,181257726	181265047,181263916,181261568	Gene ID= ENSG00000249460.1 TPM= 4.25 Transcript Type= NA
chr4	182440823	182444963	182440823	182444963	-	transcript4477.chr4.nnic@NA	transcript4477.chr4.nnic	NA	182440823	182444963	Gene ID= novel_gene_chr4_4478 TPM= 2.12 Transcript Type= NA
chr4	182457560	182462711	182457560	182462711	-	transcript4479.chr4.nnic@NA	transcript4479.chr4.nnic	NA	182457560	182462711	Gene ID= novel_gene_chr4_4480 TPM= 2.12 Transcript Type= NA
chr4	182243429	182803024	182243429	182803024	+	ENST00000511685.5@TENM3	ENST00000511685.5	protein_coding	182243429,182323946,182346651,182600924,182628651,182653771,182673005,182679666,182680248,182680543,182681814,182688166,182714087,182728965,182730200,182730878,182736808,182738401,182743170,182751800,182753450,182754385,182773472,182774918,182789093,182792274,182796637,182799596	182243476,182324252,182346929,182601161,182628889,182653893,182673219,182679876,182680349,182680737,182682014,182688351,182714233,182729181,182730319,182731139,182737075,182738544,182743419,182752032,182753604,182755259,182773647,182775153,182789389,182793885,182796767,182803024	Gene ID= ENSG00000218336.8 TPM= 2.12 Transcript Type= protein_coding
chr4	182890060	182917348	182890060	182917348	-	transcript4485.chr4.nic@DCTD	transcript4485.chr4.nic	protein_coding	182916673,182916419,182915461,182914923,182894489,182893031,182890060	182917348,182916539,182915575,182915058,182894605,182893127,182891477	Gene ID= ENSG00000129187.14 TPM= 3.54 Transcript Type= NA
chr4	182890255	182917594	182890255	182917594	-	ENST00000438320.6@DCTD	ENST00000438320.6	protein_coding	182917311,182915461,182914923,182894489,182893031,182890255	182917594,182915575,182915058,182894605,182893127,182891477	Gene ID= ENSG00000129187.14 TPM= 1.06 Transcript Type= protein_coding
chr4	182890060	182917369	182890060	182917369	-	ENST00000500813.6@DCTD	ENST00000500813.6	protein_coding	182917288,182915461,182894489,182893031,182890060	182917369,182915575,182894605,182893127,182891477	Gene ID= ENSG00000129187.14 TPM= 3.54 Transcript Type= nonsense_mediated_decay
chr4	182890104	182917379	182890104	182917379	-	ENST00000357067.7@DCTD	ENST00000357067.7	protein_coding	182917288,182915461,182914923,182894489,182893031,182890104	182917379,182915575,182915058,182894605,182893127,182891477	Gene ID= ENSG00000129187.14 TPM= 16.28 Transcript Type= protein_coding
chr4	183097017	183099199	183097017	183099199	-	ENST00000578387.1@WWC2-AS2	ENST00000578387.1	lincRNA	183097017	183099199	Gene ID= ENSG00000251359.4 TPM= 3.19 Transcript Type= lincRNA
chr4	183099240	183317184	183099240	183317184	+	transcript4501.chr4.nnic@WWC2	transcript4501.chr4.nnic	protein_coding	183099240,183207953,183208949,183240183,183245416,183248714,183249920,183253757,183259639,183260910,183264978,183265688,183265865,183268971,183271080,183280776,183282708,183284226,183285967,183289393,183312341,183315663	183099622,183208156,183209025,183240262,183245545,183248860,183249993,183253999,183259728,183261532,183265107,183265768,183265951,183269163,183271241,183280897,183282906,183284390,183286059,183289635,183312468,183317184	Gene ID= ENSG00000151718.15 TPM= 4.25 Transcript Type= NA
chr4	183099107	183280844	183099107	183280844	+	transcript4503.chr4.nic@WWC2	transcript4503.chr4.nic	protein_coding	183099107,183193599,183207953,183208949,183240183,183245416,183248714,183249920,183253757,183259639,183260910,183264978,183265688,183265865,183268971,183271080,183280776	183099622,183193708,183208156,183209025,183240262,183245545,183248860,183249993,183253999,183259728,183261532,183265107,183265768,183265951,183269163,183271241,183280844	Gene ID= ENSG00000151718.15 TPM= 5.31 Transcript Type= NA
chr4	183444591	183448198	183444591	183448198	+	ENST00000504169.1@CDKN2AIP	ENST00000504169.1	protein_coding	183444591,183445535,183446088	183445069,183445665,183448198	Gene ID= ENSG00000168564.5 TPM= 13.28 Transcript Type= protein_coding
chr4	183444635	183448198	183444635	183448198	+	ENST00000302350.4@CDKN2AIP	ENST00000302350.4	protein_coding	183444635,183445535,183446088	183445069,183445634,183448198	Gene ID= ENSG00000168564.5 TPM= 3.72 Transcript Type= protein_coding
chr4	183639635	183659225	183639635	183659225	-	ENST00000326397.9@RWDD4	ENST00000326397.9	protein_coding	183658929,183655881,183651218,183650984,183649451,183646488,183646351,183639635	183659225,183655961,183651327,183651131,183649568,183646537,183646353,183641468	Gene ID= ENSG00000182552.14 TPM= 6.37 Transcript Type= protein_coding
chr4	183639635	183659213	183639635	183659213	-	transcript4515.chr4.nic@RWDD4	transcript4515.chr4.nic	protein_coding	183658929,183655881,183651218,183650984,183649451,183646351,183639635	183659213,183655961,183651327,183651131,183649568,183646537,183641468	Gene ID= ENSG00000182552.14 TPM= 2.12 Transcript Type= NA
chr4	183639636	183659178	183639636	183659178	-	ENST00000327570.13@RWDD4	ENST00000327570.13	protein_coding	183658929,183655881,183651218,183650984,183649451,183646488,183639636	183659178,183655961,183651327,183651131,183649568,183646537,183641468	Gene ID= ENSG00000182552.14 TPM= 14.87 Transcript Type= protein_coding
chr4	183645252	183659155	183645252	183659155	-	transcript4525.chr4.nnic@RWDD4	transcript4525.chr4.nnic	protein_coding	183658929,183655881,183651218,183650984,183649451,183646488,183645252	183659155,183655961,183651327,183651131,183649568,183646537,183645595	Gene ID= ENSG00000182552.14 TPM= 2.12 Transcript Type= NA
chr4	183640628	183659201	183640628	183659201	-	ENST00000510702.5@RWDD4	ENST00000510702.5	protein_coding	183658929,183655881,183651218,183650984,183649451,183646488,183646351,183640628	183659201,183655961,183651323,183651131,183649568,183646537,183646353,183641468	Gene ID= ENSG00000182552.14 TPM= 2.12 Transcript Type= nonsense_mediated_decay
chr4	183659267	183713592	183659267	183713592	+	ENST00000334690.10@TRAPPC11	ENST00000334690.10	protein_coding	183659267,183663847,183666257,183667060,183668003,183674713,183675164,183677458,183679353,183680120,183682732,183683975,183684145,183684305,183684696,183685084,183685271,183686618,183691316,183692960,183693589,183693917,183694604,183697503,183697679,183701697,183704979,183706807,183708407,183712600	183659447,183664071,183666426,183667130,183668117,183674812,183675237,183677554,183679486,183680267,183682825,183684054,183684223,183684359,183684841,183685145,183685403,183686748,183691471,183693147,183693737,183694038,183694723,183697568,183697835,183701808,183705070,183706940,183708574,183713592	Gene ID= ENSG00000168538.15 TPM= 18.59 Transcript Type= protein_coding
chr4	183659279	183709044	183659279	183709044	+	transcript4529.chr4.nic@TRAPPC11	transcript4529.chr4.nic	protein_coding	183659279,183663847,183666257,183667060,183668003,183674713,183675164,183677458,183679353,183680120,183682732,183683975,183684145,183684305,183684696,183685084,183685271,183686618,183691316,183692960,183693589,183693917,183694604,183697503,183697679,183701697,183704979,183706807,183708407	183659447,183664071,183666426,183667130,183668117,183674812,183675237,183677554,183679486,183680267,183682825,183684054,183684223,183684359,183684841,183685145,183685403,183686748,183691471,183693147,183693737,183694038,183694723,183697568,183697835,183701808,183705070,183706940,183709044	Gene ID= ENSG00000168538.15 TPM= 2.66 Transcript Type= NA
chr4	183665930	183678368	183665930	183678368	+	transcript4532.chr4.nic@TRAPPC11	transcript4532.chr4.nic	protein_coding	183665930,183667060,183668003,183674713	183666426,183667130,183668117,183678368	Gene ID= ENSG00000168538.15 TPM= 2.12 Transcript Type= NA
chr4	183905356	184023526	183905356	184023526	+	ENST00000308497.8@STOX2	ENST00000308497.8	protein_coding	183905356,184001325,184009158,184017089	183906956,184001477,184011423,184023526	Gene ID= ENSG00000173320.11 TPM= 4.25 Transcript Type= protein_coding
chr4	183908594	183910396	183908594	183910396	-	transcript4537.chr4.nnic@NA	transcript4537.chr4.nnic	NA	183908594	183910396	Gene ID= novel_gene_chr4_4538 TPM= 7.44 Transcript Type= NA
chr4	184088706	184217961	184088706	184217961	-	ENST00000296741.6@ENPP6	ENST00000296741.6	protein_coding	184217579,184153554,184124161,184117759,184116856,184112672,184097245,184088706	184217961,184153733,184124272,184117900,184117035,184112809,184097368,184091382	Gene ID= ENSG00000164303.10 TPM= 1.06 Transcript Type= protein_coding
chr4	184387713	184474580	184387713	184474580	-	ENST00000393593.7@IRF2	ENST00000393593.7	protein_coding	184474379,184428978,184419469,184418532,184418167,184408158,184398915,184390703,184387713	184474580,184429070,184419568,184418708,184418213,184408275,184399079,184390749,184389066	Gene ID= ENSG00000168310.10 TPM= 21.24 Transcript Type= protein_coding
chr4	184389601	184391544	184389601	184391544	-	transcript4548.chr4.nnic@NA	transcript4548.chr4.nnic	NA	184389601	184391544	Gene ID= novel_gene_chr4_4549 TPM= 3.19 Transcript Type= NA
chr4	184398935	184400922	184398935	184400922	+	transcript4546.chr4.nnic@NA	transcript4546.chr4.nnic	NA	184398935	184400922	Gene ID= novel_gene_chr4_4547 TPM= 2.12 Transcript Type= NA
chr4	184474802	184477304	184474802	184477304	+	ENST00000605834.1@AC099343.3	ENST00000605834.1	lincRNA	184474802	184477304	Gene ID= ENSG00000271646.1 TPM= 4.25 Transcript Type= lincRNA
chr4	184506460	184537554	184506460	184537554	-	ENST00000605270.5@LINC02427	ENST00000605270.5	lincRNA	184537502,184509237,184506460	184537554,184509325,184507376	Gene ID= ENSG00000271538.5 TPM= 1.06 Transcript Type= lincRNA
chr4	184534314	184537534	184534314	184537534	-	transcript4553.chr4.nnic@NA	transcript4553.chr4.nnic	NA	184534314	184537534	Gene ID= novel_gene_chr4_4554 TPM= 2.12 Transcript Type= NA
chr4	184627696	184649210	184627696	184649210	-	transcript4565.chr4.nnic@CASP3	transcript4565.chr4.nnic	protein_coding	184649108,184648465,184638401,184635294,184632268,184631765,184631037,184627696	184649210,184648631,184638468,184635418,184632396,184631940,184631157,184629501	Gene ID= ENSG00000164305.18 TPM= 3.9 Transcript Type= NA
chr4	184627696	184649475	184627696	184649475	-	ENST00000308394.8@CASP3	ENST00000308394.8	protein_coding	184649395,184648465,184638401,184635294,184632268,184631765,184631037,184627696	184649475,184648631,184638468,184635418,184632396,184631940,184631157,184629501	Gene ID= ENSG00000164305.18 TPM= 14.52 Transcript Type= protein_coding
chr4	184627696	184649509	184627696	184649509	-	ENST00000523916.5@CASP3	ENST00000523916.5	protein_coding	184649395,184638401,184635294,184632268,184631765,184631037,184627696	184649509,184638468,184635418,184632396,184631940,184631157,184629501	Gene ID= ENSG00000164305.18 TPM= 17.71 Transcript Type= protein_coding
chr4	184649613	184694952	184649613	184694952	+	ENST00000314970.10@PRIMPOL	ENST00000314970.10	protein_coding	184649613,184652023,184657082,184659340,184661774,184665917,184672173,184678232,184682248,184685409,184685576,184691499,184691666,184694522	184649908,184652100,184657320,184659437,184661903,184666064,184672460,184678394,184682336,184685498,184685684,184691581,184691712,184694952	Gene ID= ENSG00000164306.10 TPM= 1.06 Transcript Type= protein_coding
chr4	184649724	184694952	184649724	184694952	+	transcript4561.chr4.nic@PRIMPOL	transcript4561.chr4.nic	protein_coding	184649724,184652023,184659340,184665917,184672173,184678232,184682248,184685409,184685576,184691499,184691666,184694522	184649908,184652100,184659437,184666064,184672460,184678394,184682336,184685498,184685684,184691581,184691712,184694952	Gene ID= ENSG00000164306.10 TPM= 2.12 Transcript Type= NA
chr4	184649643	184694952	184649643	184694952	+	transcript4563.chr4.nic@PRIMPOL	transcript4563.chr4.nic	protein_coding	184649643,184652023,184659340,184665917,184672173,184678232,184685409,184685576,184691499,184691666,184694522	184649908,184652100,184659437,184666064,184672460,184678394,184685498,184685684,184691581,184691712,184694952	Gene ID= ENSG00000164306.10 TPM= 2.12 Transcript Type= NA
chr4	184649643	184694952	184649643	184694952	+	transcript4564.chr4.nic@PRIMPOL	transcript4564.chr4.nic	protein_coding	184649643,184652023,184659340,184672173,184678232,184682248,184685409,184685576,184691499,184691666,184694522	184649908,184652100,184659437,184672460,184678394,184682336,184685498,184685684,184691581,184691712,184694952	Gene ID= ENSG00000164306.10 TPM= 2.12 Transcript Type= NA
chr4	184649667	184694963	184649667	184694963	+	ENST00000515774.5@PRIMPOL	ENST00000515774.5	protein_coding	184649667,184652023,184659340,184661774,184665917,184672173,184678232,184682248,184685409,184685576,184691499,184691666,184694522	184649908,184652100,184659437,184661903,184666064,184672460,184678394,184682336,184685498,184685684,184691581,184691712,184694963	Gene ID= ENSG00000164306.10 TPM= 5.31 Transcript Type= protein_coding
chr4	184654455	184656462	184654455	184656462	-	transcript4570.chr4.nnic@NA	transcript4570.chr4.nnic	NA	184654455	184656462	Gene ID= novel_gene_chr4_4571 TPM= 2.12 Transcript Type= NA
chr4	184694618	184734133	184694618	184734133	-	ENST00000281453.9@CENPU	ENST00000281453.9	protein_coding	184734016,184730920,184728918,184724957,184717136,184716397,184712944,184710072,184702363,184702089,184700820,184697647,184694618	184734133,184730968,184729035,184725062,184717196,184716633,184713013,184710180,184702441,184702136,184700881,184697803,184695401	Gene ID= ENSG00000151725.11 TPM= 2.12 Transcript Type= protein_coding
chr4	184695002	184734130	184695002	184734130	-	ENST00000510146.5@CENPU	ENST00000510146.5	protein_coding	184734016,184730920,184728918,184724957,184717136,184716397,184712944,184710072,184702363,184702089,184697647,184695002	184734130,184730968,184729035,184725062,184717196,184716633,184713013,184710180,184702441,184702136,184697803,184695401	Gene ID= ENSG00000151725.11 TPM= 1.06 Transcript Type= nonsense_mediated_decay
chr4	184755600	184805723	184755600	184805723	-	transcript4575.chr4.nic@ACSL1	transcript4575.chr4.nic	protein_coding	184805527,184803320,184788617,184783927,184780332,184776884,184776484,184773843,184773663,184773081,184770399,184768316,184766622,184765891,184764853,184763167,184762407,184760357,184757819,184757635,184755600	184805723,184803546,184788731,184783991,184780433,184776983,184776662,184773875,184773714,184773154,184770476,184768450,184766756,184765986,184764925,184763255,184762523,184760500,184757920,184757706,184757265	Gene ID= ENSG00000151726.13 TPM= 15.67 Transcript Type= NA
chr4	184755600	184808545	184755600	184808545	-	transcript4576.chr4.nic@ACSL1	transcript4576.chr4.nic	protein_coding	184808292,184803320,184788617,184783927,184780332,184776884,184776484,184773843,184773663,184773081,184770399,184768316,184766622,184765891,184764853,184763167,184762407,184760357,184757819,184757635,184755600	184808545,184803546,184788731,184783991,184780433,184776983,184776662,184773875,184773714,184773154,184770476,184768450,184766756,184765986,184764925,184763255,184762523,184760500,184757920,184757706,184757265	Gene ID= ENSG00000151726.13 TPM= 10.36 Transcript Type= NA
chr4	184755595	184826119	184755595	184826119	-	ENST00000454703.6@ACSL1	ENST00000454703.6	protein_coding	184825916,184788617,184783927,184780332,184776884,184776484,184773843,184773663,184773081,184770399,184768316,184766622,184765891,184764853,184763167,184762407,184760357,184757819,184757635,184755595	184826119,184788731,184783991,184780433,184776983,184776662,184773875,184773714,184773154,184770476,184768450,184766756,184765986,184764925,184763255,184762523,184760500,184757920,184757706,184757265	Gene ID= ENSG00000151726.13 TPM= 5.63 Transcript Type= protein_coding
chr4	184755601	184826094	184755601	184826094	-	ENST00000281455.6@ACSL1	ENST00000281455.6	protein_coding	184825916,184803320,184788617,184783927,184780332,184776884,184776484,184773843,184773663,184773081,184770399,184768316,184766622,184765891,184764853,184763167,184762407,184760357,184757819,184757635,184755601	184826094,184803546,184788731,184783991,184780433,184776983,184776662,184773875,184773714,184773154,184770476,184768450,184766756,184765986,184764925,184763255,184762523,184760500,184757920,184757706,184757265	Gene ID= ENSG00000151726.13 TPM= 106.96 Transcript Type= protein_coding
chr4	184801366	184804600	184801366	184804600	+	transcript4585.chr4.nnic@NA	transcript4585.chr4.nnic	NA	184801366	184804600	Gene ID= novel_gene_chr4_4586 TPM= 4.25 Transcript Type= NA
chr4	184811685	184814311	184811685	184814311	+	transcript4587.chr4.nnic@NA	transcript4587.chr4.nnic	NA	184811685	184814311	Gene ID= novel_gene_chr4_4588 TPM= 8.5 Transcript Type= NA
chr4	185143241	185150382	185143241	185150382	+	ENST00000281456.10@SLC25A4	ENST00000281456.10	protein_coding	185143241,185144764,185145759,185146814	185143483,185145250,185145899,185150382	Gene ID= ENSG00000151729.10 TPM= 78.07 Transcript Type= protein_coding
chr4	185143278	185147241	185143278	185147241	+	ENST00000491736.1@SLC25A4	ENST00000491736.1	protein_coding	185143278,185144764,185145355,185146814	185143483,185145250,185145899,185147241	Gene ID= ENSG00000151729.10 TPM= 182.69 Transcript Type= nonsense_mediated_decay
chr4	185160098	185162928	185160098	185162928	-	transcript4667.chr4.nnic@NA	transcript4667.chr4.nnic	NA	185160098	185162928	Gene ID= novel_gene_chr4_4668 TPM= 4.25 Transcript Type= NA
chr4	185159665	185204001	185159665	185204001	-	ENST00000458385.6@CFAP97	ENST00000458385.6	protein_coding	185203898,185190143,185175786,185164029,185159665	185204001,185191212,185176051,185164179,185162925	Gene ID= ENSG00000164323.12 TPM= 7.44 Transcript Type= protein_coding
chr4	185190376	185203965	185190376	185203965	-	ENST00000296775.7@CFAP97	ENST00000296775.7	protein_coding	185203898,185191050,185190376	185203965,185191212,185191047	Gene ID= ENSG00000164323.12 TPM= 2.12 Transcript Type= protein_coding
chr4	185209582	185311980	185209582	185311980	+	transcript4674.chr4.nnic@SNX25	transcript4674.chr4.nnic	protein_coding	185209582,185247294,185258848,185264438,185266969,185288012,185310635,185311714	185210255,185247378,185259064,185264610,185267155,185288082,185310816,185311980	Gene ID= ENSG00000109762.15 TPM= 5.31 Transcript Type= NA
chr4	185210079	185363966	185210079	185363966	+	ENST00000264694.12@SNX25	ENST00000264694.12	protein_coding	185210079,185247294,185258848,185264438,185266969,185288012,185310635,185320733,185323528,185332595,185339379,185341976,185346537,185351445,185353485,185357671,185361924,185362611,185363385	185210255,185247378,185259064,185264610,185267155,185288082,185310816,185320864,185323800,185332759,185339510,185342116,185346650,185351609,185353602,185357737,185362105,185362711,185363966	Gene ID= ENSG00000109762.15 TPM= 7.44 Transcript Type= protein_coding
chr4	185212493	185214114	185212493	185214114	-	transcript4677.chr4.nnic@NA	transcript4677.chr4.nnic	NA	185212493	185214114	Gene ID= novel_gene_chr4_4678 TPM= 3.19 Transcript Type= NA
chr4	185396006	185400241	185396006	185400241	+	transcript4691.chr4.nic@ANKRD37	transcript4691.chr4.nic	protein_coding	185396006,185396832,185397150,185398937,185399570,185400017	185396424,185396950,185397302,185399028,185399773,185400241	Gene ID= ENSG00000186352.8 TPM= 3.19 Transcript Type= NA
chr4	185396011	185400241	185396011	185400241	+	transcript4696.chr4.nic@ANKRD37	transcript4696.chr4.nic	protein_coding	185396011,185397150,185398937,185399570,185400017	185396424,185397302,185399028,185399773,185400241	Gene ID= ENSG00000186352.8 TPM= 6.37 Transcript Type= NA
chr4	185396484	185400241	185396484	185400241	+	ENST00000335174.5@ANKRD37	ENST00000335174.5	protein_coding	185396484,185397150,185398937,185399570,185400017	185396950,185397302,185399028,185399773,185400241	Gene ID= ENSG00000186352.8 TPM= 4.25 Transcript Type= protein_coding
chr4	185400289	185425985	185400289	185425985	-	ENST00000264689.10@UFSP2	ENST00000264689.10	protein_coding	185425866,185422485,185418587,185418441,185415710,185415155,185413726,185408271,185407936,185405780,185403494,185400289	185425985,185422563,185418770,185418507,185415867,185415347,185413872,185408435,185408060,185405856,185403618,185400478	Gene ID= ENSG00000109775.10 TPM= 33.99 Transcript Type= protein_coding
chr4	185402262	185425975	185402262	185425975	-	transcript4685.chr4.nic@UFSP2	transcript4685.chr4.nic	protein_coding	185425866,185422485,185418587,185418441,185415710,185415155,185413726,185408271,185407936,185405780,185403494,185402262	185425975,185422563,185418770,185418507,185415867,185415347,185413872,185408435,185408060,185405856,185403618,185402344	Gene ID= ENSG00000109775.10 TPM= 2.12 Transcript Type= NA
chr4	185399540	185425975	185399540	185425975	-	transcript4686.chr4.nnic@UFSP2	transcript4686.chr4.nnic	protein_coding	185425866,185422485,185418587,185418441,185415155,185413726,185408271,185407936,185405780,185403494,185399540	185425975,185422563,185418770,185418507,185415347,185413872,185408435,185408060,185405856,185403618,185400478	Gene ID= ENSG00000109775.10 TPM= 3.19 Transcript Type= NA
chr4	185501751	185535522	185501751	185535522	-	transcript4702.chr4.nic@PDLIM3	transcript4702.chr4.nic	protein_coding	185535342,185525020,185523362,185513557,185506522,185504475,185501751	185535522,185525171,185523446,185514337,185506652,185504586,185502483	Gene ID= ENSG00000154553.13 TPM= 14.52 Transcript Type= NA
chr4	185501751	185535518	185501751	185535518	-	transcript4709.chr4.nnic@PDLIM3	transcript4709.chr4.nnic	protein_coding	185535342,185525020,185523362,185506522,185504475,185501751	185535518,185525171,185523446,185506652,185504586,185502483	Gene ID= ENSG00000154553.13 TPM= 16.11 Transcript Type= NA
chr4	185501751	185535612	185501751	185535612	-	ENST00000284771.6@PDLIM3	ENST00000284771.6	protein_coding	185535342,185525020,185523362,185514703,185506522,185504475,185501751	185535612,185525171,185523446,185514890,185506652,185504586,185502483	Gene ID= ENSG00000154553.13 TPM= 120.2 Transcript Type= protein_coding
chr4	185504826	185506460	185504826	185506460	-	transcript4721.chr4.nnic@NA	transcript4721.chr4.nnic	NA	185504826	185506460	Gene ID= novel_gene_chr4_4722 TPM= 2.12 Transcript Type= NA
chr4	185508707	185510333	185508707	185510333	-	transcript4723.chr4.nnic@NA	transcript4723.chr4.nnic	NA	185508707	185510333	Gene ID= novel_gene_chr4_4724 TPM= 3.19 Transcript Type= NA
chr4	185509920	185511821	185509920	185511821	-	transcript4719.chr4.nnic@NA	transcript4719.chr4.nnic	NA	185509920	185511821	Gene ID= novel_gene_chr4_4720 TPM= 3.19 Transcript Type= NA
chr4	185587305	185812194	185587305	185812194	-	transcript4732.chr4.nnic@SORBS2	transcript4732.chr4.nnic	protein_coding	185811664,185775227,185678796,185678423,185676997,185662104,185657424,185652662,185651784,185649467,185646668,185638877,185638079,185635355,185630549,185626832,185620063,185618585,185615045,185614831,185611780,185593886,185589679,185587305	185812194,185775366,185678822,185678547,185677638,185662242,185657596,185652728,185651828,185649656,185646782,185639035,185638162,185635411,185630598,185627019,185620151,185618631,185615159,185614959,185611980,185593935,185589785,185587688	Gene ID= ENSG00000154556.17 TPM= 58.93 Transcript Type= NA
chr4	185585523	185812194	185585523	185812194	-	transcript4736.chr4.nic@SORBS2	transcript4736.chr4.nic	protein_coding	185811664,185775227,185678796,185678423,185676997,185662104,185657424,185652662,185651784,185649467,185646668,185638877,185635355,185630549,185626832,185620063,185618585,185615045,185614831,185611780,185593886,185589679,185585523	185812194,185775366,185678822,185678547,185677638,185662242,185657596,185652728,185651828,185649656,185646782,185639035,185635411,185630598,185627019,185620151,185618631,185615159,185614959,185611980,185593935,185589785,185587688	Gene ID= ENSG00000154556.17 TPM= 725.28 Transcript Type= NA
chr4	185587305	185812224	185587305	185812224	-	transcript4751.chr4.nic@SORBS2	transcript4751.chr4.nic	protein_coding	185811664,185775227,185678796,185678423,185662104,185657424,185652662,185651784,185649467,185646668,185638877,185635355,185630549,185626832,185620063,185618585,185615045,185614831,185611780,185593886,185589679,185587305	185812224,185775366,185678822,185678547,185662242,185657596,185652728,185651828,185649656,185646782,185639035,185635411,185630598,185627019,185620151,185618631,185615159,185614959,185611980,185593935,185589785,185587688	Gene ID= ENSG00000154556.17 TPM= 70 Transcript Type= NA
chr4	185638761	185641773	185638761	185641773	+	transcript4787.chr4.nnic@NA	transcript4787.chr4.nnic	NA	185638761	185641773	Gene ID= novel_gene_chr4_4788 TPM= 16.99 Transcript Type= NA
chr4	185640408	185644184	185640408	185644184	-	transcript4803.chr4.nnic@NA	transcript4803.chr4.nnic	NA	185640408	185644184	Gene ID= novel_gene_chr4_4804 TPM= 14.87 Transcript Type= NA
chr4	185666003	185670218	185666003	185670218	+	transcript4793.chr4.nnic@NA	transcript4793.chr4.nnic	NA	185666003	185670218	Gene ID= novel_gene_chr4_4794 TPM= 8.5 Transcript Type= NA
chr4	185709306	185712818	185709306	185712818	-	transcript4805.chr4.nnic@NA	transcript4805.chr4.nnic	NA	185709306	185712818	Gene ID= novel_gene_chr4_4806 TPM= 8.5 Transcript Type= NA
chr4	185735378	185738720	185735378	185738720	-	transcript4807.chr4.nnic@NA	transcript4807.chr4.nnic	NA	185735378	185738720	Gene ID= novel_gene_chr4_4808 TPM= 10.62 Transcript Type= NA
chr4	185747774	185751189	185747774	185751189	+	transcript4785.chr4.nnic@NA	transcript4785.chr4.nnic	NA	185747774	185751189	Gene ID= novel_gene_chr4_4786 TPM= 75.41 Transcript Type= NA
chr4	185807989	185809480	185807989	185809480	+	transcript4789.chr4.nnic@NA	transcript4789.chr4.nnic	NA	185807989	185809480	Gene ID= novel_gene_chr4_4790 TPM= 260.23 Transcript Type= NA
chr4	185874426	185877884	185874426	185877884	+	transcript4827.chr4.nnic@NA	transcript4827.chr4.nnic	NA	185874426	185877884	Gene ID= novel_gene_chr4_4828 TPM= 8.5 Transcript Type= NA
chr4	186144810	186158921	186144810	186158921	+	transcript4842.chr4.nic@FAM149A	transcript4842.chr4.nic	protein_coding	186144810,186149173,186149593,186151903,186153645,186154468,186156000,186157565,186157889	186145112,186149283,186149704,186152045,186153770,186154638,186156190,186157719,186158921	Gene ID= ENSG00000109794.13 TPM= 3.19 Transcript Type= NA
chr4	186191286	186193339	186191286	186193339	+	transcript4851.chr4.nnic@NA	transcript4851.chr4.nnic	NA	186191286	186193339	Gene ID= novel_gene_chr4_4852 TPM= 5.31 Transcript Type= NA
chr4	186191520	186210801	186191520	186210801	+	ENST00000378802.4@CYP4V2	ENST00000378802.4	protein_coding	186191520,186194500,186196003,186196940,186197533,186198957,186201157,186205200,186208865,186209093,186210469	186192037,186194612,186196088,186197130,186197602,186199083,186201342,186205302,186208999,186209272,186210801	Gene ID= ENSG00000145476.15 TPM= 1.06 Transcript Type= protein_coding
chr4	189940788	189963204	189940788	189963204	+	ENST00000226798.8@FRG1	ENST00000226798.8	protein_coding	189940788,189943202,189952162,189953068,189955037,189957398,189960748,189961822,189963093	189941071,189943272,189952287,189953125,189955151,189957502,189960839,189961932,189963204	Gene ID= ENSG00000109536.11 TPM= 16.99 Transcript Type= protein_coding
chr5	195778	196341	195778	196341	+	ENST00000563761.1@AC021087.4	ENST00000563761.1	sense_overlapping	195778	196341	Gene ID= ENSG00000261434.1 TPM= 2.12 Transcript Type= sense_overlapping
chr5	218241	256700	218241	256700	+	ENST00000264932.10@SDHA	ENST00000264932.10	protein_coding	218241,223482,224360,225419,225883,228185,230876,233477,235144,236428,240358,250992,251338,254393,256334	218418,223568,224521,225562,226047,228333,231000,233645,235339,236599,240476,251103,251468,254506,256700	Gene ID= ENSG00000073578.16 TPM= 1424.28 Transcript Type= protein_coding
chr5	218303	256682	218303	256682	+	ENST00000504309.5@SDHA	ENST00000504309.5	protein_coding	218303,223482,224360,225419,225883,228185,230876,233477,235144,236428,240358,254393,256334	218418,223568,224521,225562,226047,228333,231000,233645,235339,236599,240476,254506,256682	Gene ID= ENSG00000073578.16 TPM= 19.94 Transcript Type= protein_coding
chr5	218318	256679	218318	256679	+	ENST00000510361.5@SDHA	ENST00000510361.5	protein_coding	218318,223482,224360,225883,228185,230876,233477,235144,236428,240358,250992,251338,254393,256334	218418,223568,224521,226047,228333,231000,233645,235339,236599,240476,251103,251468,254506,256679	Gene ID= ENSG00000073578.16 TPM= 84.97 Transcript Type= protein_coding
chr5	256811	258926	256811	258926	-	transcript31.chr5.nnic@NA	transcript31.chr5.nnic	NA	258896,258669,258001,256811	258926,258771,258636,257782	Gene ID= novel_gene_chr5_32 TPM= 8.85 Transcript Type= NA
chr5	256811	258983	256811	258983	-	transcript42.chr5.nnic@NA	transcript42.chr5.nnic	NA	258894,257970,256811	258983,258737,257750	Gene ID= novel_gene_chr5_43 TPM= 12.75 Transcript Type= NA
chr5	256811	259017	256811	259017	-	transcript47.chr5.nnic@NA	transcript47.chr5.nnic	NA	258939,258001,256811	259017,258906,257782	Gene ID= novel_gene_chr5_48 TPM= 17.35 Transcript Type= NA
chr5	256811	259145	256811	259145	-	transcript33.chr5.nnic@NA	transcript33.chr5.nnic	NA	258974,258939,258001,256811	259145,258941,258906,257782	Gene ID= novel_gene_chr5_34 TPM= 18.41 Transcript Type= NA
chr5	256811	260295	256811	260295	-	transcript65.chr5.nnic@NA	transcript65.chr5.nnic	NA	258001,256811	260295,257782	Gene ID= novel_gene_chr5_66 TPM= 57.97 Transcript Type= NA
chr5	256811	260935	256811	260935	-	transcript28.chr5.nnic@NA	transcript28.chr5.nnic	NA	259721,257952,257879,256811	260935,259048,257920,257690	Gene ID= novel_gene_chr5_29 TPM= 9.11 Transcript Type= NA
chr5	256811	260936	256811	260936	-	transcript19.chr5.nnic@NA	transcript19.chr5.nnic	NA	260073,259369,258985,257952,257879,256811	260936,260008,259144,258636,257920,257690	Gene ID= novel_gene_chr5_20 TPM= 8.76 Transcript Type= NA
chr5	256812	260169	256812	260169	-	transcript68.chr5.nnic@NA	transcript68.chr5.nnic	NA	258033,256812	260169,257813	Gene ID= novel_gene_chr5_69 TPM= 6.99 Transcript Type= NA
chr5	262354	265235	262354	265235	+	transcript70.chr5.nnic@NA	transcript70.chr5.nnic	NA	262354	265235	Gene ID= novel_gene_chr5_71 TPM= 3.19 Transcript Type= NA
chr5	262354	265235	262354	265235	+	transcript76.chr5.nnic@NA	transcript76.chr5.nnic	NA	262354	265235	Gene ID= novel_gene_chr5_77 TPM= 3.19 Transcript Type= NA
chr5	271621	314974	271621	314974	+	ENST00000264933.8@PDCD6	ENST00000264933.8	protein_coding	271621,272711,304177,306602,311293,314417	271821,272772,304221,306760,311402,314974	Gene ID= ENSG00000249915.7 TPM= 58.6 Transcript Type= protein_coding
chr5	271621	314974	271621	314974	+	ENST00000618970.4@PDCD6	ENST00000618970.4	protein_coding	271621,272711,311293,314417	271821,272772,311402,314974	Gene ID= ENSG00000249915.7 TPM= 5.49 Transcript Type= protein_coding
chr5	271657	276940	271657	276940	+	ENST00000509581.5@PDCD6	ENST00000509581.5	protein_coding	271657,272711,276012	271821,272772,276940	Gene ID= ENSG00000249915.7 TPM= 7.44 Transcript Type= protein_coding
chr5	271657	314969	271657	314969	+	ENST00000507528.5@PDCD6	ENST00000507528.5	protein_coding	271657,272711,304177,306602,311293,314417	271821,272772,304221,306754,311402,314969	Gene ID= ENSG00000249915.7 TPM= 14.52 Transcript Type= protein_coding
chr5	441498	443160	441498	443160	-	ENST00000623673.1@EXOC3-AS1	ENST00000623673.1	antisense_RNA	441498	443160	Gene ID= ENSG00000221990.4 TPM= 2.12 Transcript Type= antisense_RNA
chr5	443158	467296	443158	467296	+	ENST00000512944.5@EXOC3	ENST00000512944.5	protein_coding	443158,446150,447533,453370,456889,457900,459359,461960,462157,464290,465111,465718,466727	443290,446349,447752,454051,457006,458025,459459,462070,462307,464412,465272,465845,467296	Gene ID= ENSG00000180104.15 TPM= 50.1 Transcript Type= protein_coding
chr5	443157	467285	443157	467285	+	transcript95.chr5.nic@EXOC3	transcript95.chr5.nic	protein_coding	443157,446150,447533,453370,461960,462157,464290,465111,465718,466727	443290,446349,447752,454051,462070,462307,464412,465272,465845,467285	Gene ID= ENSG00000180104.15 TPM= 5.49 Transcript Type= NA
chr5	446149	467285	446149	467285	+	ENST00000315013.9@EXOC3	ENST00000315013.9	protein_coding	446149,447533,453370,456889,457900,459359,461960,462157,464290,465111,465718,466727	446349,447752,454051,457006,458025,459459,462070,462307,464412,465272,465845,467285	Gene ID= ENSG00000180104.15 TPM= 3.9 Transcript Type= protein_coding
chr5	462833	467285	462833	467285	+	transcript109.chr5.nnic@NA	transcript109.chr5.nnic	NA	462833	467285	Gene ID= novel_gene_chr5_110 TPM= 3.19 Transcript Type= NA
chr5	470510	473098	470510	473098	-	ENST00000342584.3@PP7080	ENST00000342584.3	antisense_RNA	472679,470510	473098,471965	Gene ID= ENSG00000188242.4 TPM= 5.31 Transcript Type= antisense_RNA
chr5	478123	480884	478123	480884	+	ENST00000534918.1@SLC9A3-AS1	ENST00000534918.1	processed_transcript	478123	480884	Gene ID= ENSG00000225138.7 TPM= 3.19 Transcript Type= retained_intron
chr5	612272	653553	612272	653553	+	ENST00000264935.5@CEP72	ENST00000264935.5	protein_coding	612272,618990,620069,624471,633769,635372,637517,639089,640408,644299,647805,652988	612443,619117,620261,624579,633947,635584,637818,639224,640604,644425,647916,653553	Gene ID= ENSG00000112877.7 TPM= 1.06 Transcript Type= protein_coding
chr5	659862	693395	659862	693395	-	ENST00000360578.6@TPPP	ENST00000360578.6	protein_coding	693278,677750,665970,659862	693395,678064,666123,665296	Gene ID= ENSG00000171368.11 TPM= 22.31 Transcript Type= protein_coding
chr5	693524	694830	693524	694830	+	transcript138.chr5.nnic@NA	transcript138.chr5.nnic	NA	693524,694081	693722,694830	Gene ID= novel_gene_chr5_139 TPM= 5.31 Transcript Type= NA
chr5	693540	786154	693540	786154	+	transcript140.chr5.nnic@NA	transcript140.chr5.nnic	NA	693540,785413	693722,786154	Gene ID= novel_gene_chr5_141 TPM= 2.12 Transcript Type= NA
chr5	782953	784758	782953	784758	-	transcript135.chr5.nnic@NA	transcript135.chr5.nnic	NA	784668,783942,782953	784758,784124,783140	Gene ID= novel_gene_chr5_136 TPM= 2.12 Transcript Type= NA
chr5	795607	850986	795607	850986	-	ENST00000283441.12@ZDHHC11	ENST00000283441.12	protein_coding	850381,848482,847514,843600,840495,837365,833773,825164,821861,819525,814761,801100,795607	850986,848660,847615,843724,840650,837480,833807,825251,821895,819612,814795,801164,796580	Gene ID= ENSG00000188818.12 TPM= 1.06 Transcript Type= protein_coding
chr5	863741	892817	863741	892817	-	transcript144.chr5.nic@BRD9	transcript144.chr5.nic	protein_coding	892606,891640,891155,889587,889021,887361,886592,883938,881107,879794,878355,876101,871526,870473,865414,863741	892817,891854,891287,889647,889165,887471,886767,884070,881182,879889,878487,876212,871564,870575,865581,864568	Gene ID= ENSG00000028310.17 TPM= 9.03 Transcript Type= NA
chr5	864273	892824	864273	892824	-	ENST00000467963.5@BRD9	ENST00000467963.5	protein_coding	892606,891640,891155,889587,889021,887361,886592,883938,881107,879794,878355,876101,871526,870473,865414,864273	892824,891854,891287,889647,889165,887471,886707,884070,881182,879889,878487,876212,871564,870575,865581,864568	Gene ID= ENSG00000028310.17 TPM= 5.31 Transcript Type= protein_coding
chr5	863741	892800	863741	892800	-	ENST00000495265.5@BRD9	ENST00000495265.5	protein_coding	892606,891640,891155,889587,889021,887361,886592,883938,881107,879794,878355,876101,871526,870473,865414,863741	892800,891854,891287,889766,889165,887471,886767,884070,881182,879889,878487,876212,871564,870575,865581,864568	Gene ID= ENSG00000028310.17 TPM= 4.78 Transcript Type= nonsense_mediated_decay
chr5	1030576	1032107	1030576	1032107	-	transcript157.chr5.nnic@NA	transcript157.chr5.nnic	NA	1030576	1032107	Gene ID= novel_gene_chr5_158 TPM= 2.12 Transcript Type= NA
chr5	1050376	1112068	1050376	1112068	-	transcript160.chr5.nic@SLC12A7	transcript160.chr5.nic	protein_coding	1111868,1094154,1093533,1088982,1088306,1086903,1085232,1083745,1081577,1079398,1078701,1077833,1076694,1076138,1075371,1074567,1073633,1065283,1064083,1063844,1060344,1057471,1056582,1053349,1050376	1112068,1094248,1093655,1089128,1088360,1087033,1085473,1083956,1081744,1079496,1078758,1078007,1076812,1076236,1075490,1074671,1073801,1065478,1064252,1063975,1060451,1057649,1056596,1053482,1052451	Gene ID= ENSG00000113504.20 TPM= 63.73 Transcript Type= NA
chr5	1050376	1068548	1050376	1068548	-	transcript169.chr5.nnic@SLC12A7	transcript169.chr5.nnic	protein_coding	1066199,1065283,1064083,1063844,1060344,1057471,1056582,1053349,1050376	1068548,1065478,1064252,1063975,1060451,1057649,1056596,1053482,1052451	Gene ID= ENSG00000113504.20 TPM= 8.5 Transcript Type= NA
chr5	1084631	1089591	1084631	1089591	-	transcript176.chr5.nic@SLC12A7	transcript176.chr5.nic	protein_coding	1088306,1086903,1084631	1089591,1087033,1085473	Gene ID= ENSG00000113504.20 TPM= 7.44 Transcript Type= NA
chr5	1050376	1112035	1050376	1112035	-	ENST00000264930.9@SLC12A7	ENST00000264930.9	protein_coding	1111868,1094154,1093533,1088982,1088306,1086903,1085232,1083745,1081577,1079398,1078701,1077833,1076694,1076138,1075371,1074567,1073633,1065283,1064083,1063844,1060344,1057471,1053349,1050376	1112035,1094248,1093655,1089128,1088360,1087033,1085473,1083956,1081744,1079496,1078758,1078007,1076812,1076236,1075490,1074671,1073801,1065478,1064252,1063975,1060451,1057649,1053482,1052451	Gene ID= ENSG00000113504.20 TPM= 130.65 Transcript Type= protein_coding
chr5	1050383	1055559	1050383	1055559	-	transcript183.chr5.nnic@NA	transcript183.chr5.nnic	NA	1050383	1055559	Gene ID= novel_gene_chr5_184 TPM= 3.19 Transcript Type= NA
chr5	1317744	1345099	1317744	1345099	-	ENST00000320895.9@CLPTM1L	ENST00000320895.9	protein_coding	1344680,1344351,1341671,1338860,1337904,1335057,1334289,1331799,1330280,1325751,1324763,1323787,1322877,1321764,1321635,1320616,1317744	1345099,1344451,1341860,1339005,1337982,1335174,1334383,1331883,1330383,1325816,1324813,1323869,1322911,1321819,1321679,1320731,1318453	Gene ID= ENSG00000049656.13 TPM= 64.79 Transcript Type= protein_coding
chr5	1317848	1319644	1317848	1319644	-	transcript197.chr5.nnic@NA	transcript197.chr5.nnic	NA	1317848	1319644	Gene ID= novel_gene_chr5_198 TPM= 2.12 Transcript Type= NA
chr5	1345194	1350799	1345194	1350799	+	transcript200.chr5.nnic@NA	transcript200.chr5.nnic	NA	1345194	1350799	Gene ID= novel_gene_chr5_201 TPM= 55.23 Transcript Type= NA
chr5	1461429	1523995	1461429	1523995	-	transcript209.chr5.nnic@LPCAT1	transcript209.chr5.nnic	protein_coding	1523710,1501461,1489746,1488391,1483428,1480942,1479621,1477404,1474560,1473957,1470826,1466749,1461429	1523995,1501603,1489858,1488451,1483486,1480976,1479675,1477486,1474685,1474110,1470924,1466890,1463835	Gene ID= ENSG00000153395.9 TPM= 3.72 Transcript Type= NA
chr5	1461423	1523977	1461423	1523977	-	ENST00000283415.3@LPCAT1	ENST00000283415.3	protein_coding	1523710,1501461,1494700,1489746,1488391,1483428,1480942,1479621,1477404,1474560,1473957,1470826,1466749,1461423	1523977,1501603,1494914,1489858,1488451,1483486,1480976,1479675,1477486,1474685,1474110,1470924,1466890,1463835	Gene ID= ENSG00000153395.9 TPM= 9.03 Transcript Type= protein_coding
chr5	1516634	1520351	1516634	1520351	-	transcript213.chr5.nnic@NA	transcript213.chr5.nnic	NA	1516634	1520351	Gene ID= novel_gene_chr5_214 TPM= 2.12 Transcript Type= NA
chr5	1567483	1569841	1567483	1569841	-	transcript227.chr5.nnic@NA	transcript227.chr5.nnic	NA	1567483	1569841	Gene ID= novel_gene_chr5_228 TPM= 2.12 Transcript Type= NA
chr5	1569894	1571821	1569894	1571821	+	transcript215.chr5.nnic@NA	transcript215.chr5.nnic	NA	1569894,1570118,1570222	1570021,1570189,1571821	Gene ID= novel_gene_chr5_216 TPM= 9.56 Transcript Type= NA
chr5	1569893	1571824	1569893	1571824	+	transcript221.chr5.nnic@NA	transcript221.chr5.nnic	NA	1569893,1570054	1569957,1571824	Gene ID= novel_gene_chr5_216 TPM= 5.84 Transcript Type= NA
chr5	1570117	1571823	1570117	1571823	+	transcript224.chr5.nnic@NA	transcript224.chr5.nnic	NA	1570117,1570182	1570149,1571823	Gene ID= novel_gene_chr5_216 TPM= 7.97 Transcript Type= NA
chr5	1598920	1634008	1598920	1634008	-	transcript236.chr5.nic@AC026412.1	transcript236.chr5.nic	transcribed_unprocessed_pseudogene	1633808,1632845,1602691,1599627,1598920	1634008,1632906,1602735,1599827,1599269	Gene ID= ENSG00000188002.10 TPM= 3.19 Transcript Type= NA
chr5	1628522	1634008	1628522	1634008	-	transcript240.chr5.nnic@AC026412.1	transcript240.chr5.nnic	transcribed_unprocessed_pseudogene	1633808,1632845,1628522	1634008,1632906,1629630	Gene ID= ENSG00000188002.10 TPM= 2.12 Transcript Type= NA
chr5	1628698	1634008	1628698	1634008	-	transcript241.chr5.nic@AC026412.1	transcript241.chr5.nic	transcribed_unprocessed_pseudogene	1633808,1632644,1628698	1634008,1632906,1629630	Gene ID= ENSG00000188002.10 TPM= 3.19 Transcript Type= NA
chr5	1798387	1799895	1798387	1799895	-	ENST00000508987.1@MRPL36	ENST00000508987.1	protein_coding	1799771,1798387	1799895,1798947	Gene ID= ENSG00000171421.12 TPM= 23.02 Transcript Type= protein_coding
chr5	1798387	1799837	1798387	1799837	-	transcript245.chr5.nnic@MRPL36	transcript245.chr5.nnic	protein_coding	1799781,1798387	1799837,1798947	Gene ID= ENSG00000171421.12 TPM= 19.83 Transcript Type= NA
chr5	1798386	1799839	1798386	1799839	-	ENST00000505059.6@MRPL36	ENST00000505059.6	protein_coding	1799792,1798386	1799839,1798947	Gene ID= ENSG00000171421.12 TPM= 38.95 Transcript Type= protein_coding
chr5	1801400	1816605	1801400	1816605	+	ENST00000274137.9@NDUFS6	ENST00000274137.9	protein_coding	1801400,1802321,1814339,1815851	1801549,1802374,1814461,1816605	Gene ID= ENSG00000145494.11 TPM= 1.06 Transcript Type= protein_coding
chr5	1877427	1887179	1877427	1887179	-	ENST00000622814.4@IRX4	ENST00000622814.4	protein_coding	1887062,1882603,1881808,1880725,1880066,1879504,1877427	1887179,1882747,1882059,1880834,1880143,1879832,1878792	Gene ID= ENSG00000113430.9 TPM= 7.29 Transcript Type= protein_coding
chr5	1877448	1883198	1877448	1883198	-	transcript260.chr5.nic@IRX4	transcript260.chr5.nic	protein_coding	1882603,1881808,1880725,1880066,1879504,1877448	1883198,1882059,1880834,1880143,1879832,1878792	Gene ID= ENSG00000113430.9 TPM= 3.21 Transcript Type= NA
chr5	1877448	1887218	1877448	1887218	-	ENST00000505790.5@IRX4	ENST00000505790.5	protein_coding	1886862,1882603,1881808,1880725,1879504,1877448	1887218,1882747,1882059,1880834,1879832,1878792	Gene ID= ENSG00000113430.9 TPM= 25.51 Transcript Type= protein_coding
chr5	1877448	1887401	1877448	1887401	-	transcript265.chr5.nnic@IRX4	transcript265.chr5.nnic	protein_coding	1887062,1882603,1881808,1880725,1879504,1877448	1887401,1882747,1882059,1880834,1879868,1878792	Gene ID= ENSG00000113430.9 TPM= 3.21 Transcript Type= NA
chr5	1877413	1887236	1877413	1887236	-	ENST00000513692.5@IRX4	ENST00000513692.5	protein_coding	1887062,1882603,1881808,1880725,1879504,1877413	1887236,1882747,1882059,1880834,1879832,1878792	Gene ID= ENSG00000113430.9 TPM= 16.85 Transcript Type= protein_coding
chr5	1877427	1886984	1877427	1886984	-	ENST00000613726.4@IRX4	ENST00000613726.4	protein_coding	1886862,1882603,1881808,1880725,1880066,1879504,1877427	1886984,1882747,1882059,1880834,1880143,1879832,1878792	Gene ID= ENSG00000113430.9 TPM= 13.66 Transcript Type= protein_coding
chr5	1877427	1882766	1877427	1882766	-	ENST00000231357.6@IRX4	ENST00000231357.6	protein_coding	1882603,1881808,1880725,1879504,1877427	1882766,1882059,1880834,1879832,1878792	Gene ID= ENSG00000113430.9 TPM= 4.63 Transcript Type= protein_coding
chr5	1883115	1884649	1883115	1884649	+	transcript268.chr5.nnic@AC025183.1	transcript268.chr5.nnic	antisense_RNA	1883115,1884480	1883546,1884649	Gene ID= ENSG00000249116.1 TPM= 35.05 Transcript Type= NA
chr5	2745845	2751662	2745845	2751662	-	ENST00000382611.10@IRX2	ENST00000382611.10	protein_coding	2751165,2749382,2748345,2747541,2745845	2751662,2749787,2749052,2747616,2746786	Gene ID= ENSG00000170561.12 TPM= 1.06 Transcript Type= protein_coding
chr5	2746766	2751655	2746766	2751655	-	ENST00000302057.5@IRX2	ENST00000302057.5	protein_coding	2751165,2749382,2748345,2746766	2751655,2749787,2749052,2747616	Gene ID= ENSG00000170561.12 TPM= 2.12 Transcript Type= protein_coding
chr5	5422668	5462938	5422668	5462938	+	transcript288.chr5.nic@ICE1	transcript288.chr5.nic	protein_coding	5422668,5436418,5437080,5439895,5441112,5443168,5444289,5447427,5447721,5447841,5454552,5457332,5460436	5422999,5436476,5437114,5439913,5441223,5443244,5444326,5447509,5447760,5447897,5454638,5457741,5462938	Gene ID= ENSG00000164151.11 TPM= 2.12 Transcript Type= NA
chr5	5422694	5490234	5422694	5490234	+	ENST00000296564.8@ICE1	ENST00000296564.8	protein_coding	5422694,5436418,5437080,5439895,5441112,5443168,5444289,5447427,5447721,5447841,5454552,5457332,5460436,5466334,5468828,5473558,5475973,5486721,5489149	5422999,5436476,5437114,5439913,5441223,5443244,5444326,5447509,5447760,5447897,5454638,5457741,5465226,5466502,5468988,5473748,5476079,5486819,5490234	Gene ID= ENSG00000164151.11 TPM= 11.68 Transcript Type= protein_coding
chr5	6371881	6378594	6371881	6378594	-	ENST00000255764.3@MED10	ENST00000255764.3	protein_coding	6378362,6377166,6374324,6371881	6378594,6377249,6374426,6372601	Gene ID= ENSG00000133398.3 TPM= 50.98 Transcript Type= protein_coding
chr5	6376961	6378549	6376961	6378549	-	transcript297.chr5.nnic@NA	transcript297.chr5.nnic	NA	6376961	6378549	Gene ID= novel_gene_chr5_298 TPM= 2.12 Transcript Type= NA
chr5	6448623	6494909	6448623	6494909	+	ENST00000399816.3@UBE2QL1	ENST00000399816.3	protein_coding	6448623,6491218	6449247,6494909	Gene ID= ENSG00000215218.3 TPM= 105.15 Transcript Type= protein_coding
chr5	6599239	6633063	6599239	6633063	-	transcript303.chr5.nnic@NSUN2	transcript303.chr5.nnic	protein_coding	6632884,6632599,6631873,6625564,6623214,6622016,6620106,6619316,6617950,6616727,6611725,6610955,6609826,6607200,6606820,6605273,6604605,6604138,6602461,6599239	6633063,6632756,6631977,6625669,6623285,6622100,6620298,6619467,6618024,6616857,6611798,6611085,6609922,6607384,6606912,6605408,6604685,6604276,6602500,6600232	Gene ID= ENSG00000037474.14 TPM= 3.01 Transcript Type= NA
chr5	6599239	6633086	6599239	6633086	-	transcript305.chr5.nnic@NSUN2	transcript305.chr5.nnic	protein_coding	6632884,6632599,6631873,6625564,6623214,6622016,6620106,6617950,6616727,6611725,6610955,6609826,6607200,6606820,6605273,6604605,6604138,6602461,6599239	6633086,6632756,6631977,6625669,6623285,6622100,6620298,6618024,6616857,6611798,6611085,6609922,6607384,6606912,6605375,6604685,6604276,6602500,6600232	Gene ID= ENSG00000037474.14 TPM= 4.6 Transcript Type= NA
chr5	6599239	6633291	6599239	6633291	-	ENST00000264670.10@NSUN2	ENST00000264670.10	protein_coding	6632884,6632599,6631873,6625564,6623214,6622016,6620106,6617950,6616727,6611725,6610955,6609826,6607200,6606820,6605273,6604605,6604138,6602461,6599239	6633291,6632756,6631977,6625669,6623285,6622100,6620298,6618024,6616857,6611798,6611085,6609922,6607384,6606912,6605408,6604685,6604276,6602500,6600232	Gene ID= ENSG00000037474.14 TPM= 63.55 Transcript Type= protein_coding
chr5	6713007	6757048	6713007	6757048	+	ENST00000230859.7@PAPD7	ENST00000230859.7	protein_coding	6713007,6737510,6738683,6739732,6742490,6743712,6746214,6748464,6749557,6750331,6751039,6752873,6754751	6714699,6737633,6738729,6739852,6742597,6743840,6746427,6748590,6749657,6750503,6751197,6753037,6757048	Gene ID= ENSG00000112941.13 TPM= 18.06 Transcript Type= protein_coding
chr5	6716720	6718980	6716720	6718980	+	transcript330.chr5.nnic@NA	transcript330.chr5.nnic	NA	6716720	6718980	Gene ID= novel_gene_chr5_331 TPM= 2.12 Transcript Type= NA
chr5	7859159	7869026	7859159	7869026	-	transcript334.chr5.nic@FASTKD3	transcript334.chr5.nic	protein_coding	7868979,7866646,7865898,7862823,7861583,7861149,7859159	7869026,7868107,7865983,7862997,7861652,7861263,7859539	Gene ID= ENSG00000124279.11 TPM= 5.31 Transcript Type= NA
chr5	7869143	7901116	7869143	7901116	+	transcript338.chr5.nic@MTRR	transcript338.chr5.nic	protein_coding	7869143,7870770,7875258,7877944,7883155,7885701,7886615,7889095,7891372,7892727,7895734,7896864,7897065,7899914	7869215,7870923,7875375,7878322,7883277,7885854,7886703,7889275,7891414,7892913,7895852,7896956,7897247,7901116	Gene ID= ENSG00000124275.14 TPM= 4.25 Transcript Type= NA
chr5	7869148	7901124	7869148	7901124	+	ENST00000511461.5@MTRR	ENST00000511461.5	protein_coding	7869148,7870770,7875258,7877944,7883155,7885701,7886615,7889095,7891372,7892727,7895734,7896864,7897065,7899914	7869189,7870923,7875375,7878322,7883277,7885854,7886703,7889275,7891414,7892913,7895852,7896956,7897247,7901124	Gene ID= ENSG00000124275.14 TPM= 3.72 Transcript Type= nonsense_mediated_decay
chr5	7869189	7901124	7869189	7901124	+	ENST00000440940.6@MTRR	ENST00000440940.6	protein_coding	7869189,7870770,7873373,7875258,7877944,7883155,7885701,7886615,7889095,7891372,7892727,7895734,7896864,7897065,7899914	7869215,7870923,7873526,7875375,7878322,7883277,7885854,7886703,7889275,7891414,7892913,7895852,7896956,7897247,7901124	Gene ID= ENSG00000124275.14 TPM= 10.09 Transcript Type= protein_coding
chr5	8457493	8460663	8457493	8460663	+	ENST00000502001.2@MIR4458HG	ENST00000502001.2	lincRNA	8457493,8459933	8457766,8460663	Gene ID= ENSG00000247516.6 TPM= 45.67 Transcript Type= lincRNA
chr5	8457691	8463095	8457691	8463095	+	ENST00000606459.1@MIR4458HG	ENST00000606459.1	lincRNA	8457691,8459933	8457766,8463095	Gene ID= ENSG00000247516.6 TPM= 4.25 Transcript Type= lincRNA
chr5	9035026	9546075	9035026	9546075	-	ENST00000382496.9@SEMA5A	ENST00000382496.9	protein_coding	9545584,9437756,9379823,9337713,9318372,9237828,9226869,9224674,9201955,9197168,9190267,9154488,9136504,9122656,9118998,9108140,9066421,9062887,9054087,9051873,9050410,9044373,9035026	9546075,9437852,9380023,9337812,9318417,9237890,9226967,9224887,9202240,9197303,9190471,9154695,9136621,9122837,9119141,9108287,9066646,9063105,9054257,9052028,9050457,9044584,9043016	Gene ID= ENSG00000112902.11 TPM= 42.49 Transcript Type= protein_coding
chr5	9366394	9367884	9366394	9367884	-	transcript357.chr5.nnic@NA	transcript357.chr5.nnic	NA	9366394	9367884	Gene ID= novel_gene_chr5_358 TPM= 2.12 Transcript Type= NA
chr5	9535844	9536630	9535844	9536630	+	transcript355.chr5.nnic@NA	transcript355.chr5.nnic	NA	9535844	9536630	Gene ID= novel_gene_chr5_356 TPM= 3.19 Transcript Type= NA
chr5	9546200	9550609	9546200	9550609	+	ENST00000508179.1@SNHG18	ENST00000508179.1	lincRNA	9546200,9548990,9549302	9546530,9549149,9550609	Gene ID= ENSG00000250786.1 TPM= 7.44 Transcript Type= lincRNA
chr5	10221682	10249897	10221682	10249897	-	transcript367.chr5.nnic@FAM173B	transcript367.chr5.nnic	protein_coding	10249858,10239067,10236478,10221682	10249897,10239356,10236617,10227649	Gene ID= ENSG00000150756.13 TPM= 2.12 Transcript Type= NA
chr5	10232744	10249897	10232744	10249897	-	transcript369.chr5.nnic@FAM173B	transcript369.chr5.nnic	protein_coding	10249858,10239067,10232744	10249897,10239356,10236617	Gene ID= ENSG00000150756.13 TPM= 4.25 Transcript Type= NA
chr5	10249921	10266412	10249921	10266412	+	ENST00000280326.8@CCT5	ENST00000280326.8	protein_coding	10249921,10254145,10254674,10255955,10258111,10258386,10260792,10261560,10262481,10263134,10264656	10250445,10254205,10254838,10256153,10258303,10258535,10260911,10261745,10262618,10263314,10266412	Gene ID= ENSG00000150753.11 TPM= 56.29 Transcript Type= protein_coding
chr5	10250313	10252455	10250313	10252455	+	transcript385.chr5.nnic@NA	transcript385.chr5.nnic	NA	10250313	10252455	Gene ID= novel_gene_chr5_386 TPM= 2.12 Transcript Type= NA
chr5	10279277	10308026	10279277	10308026	-	ENST00000296658.3@CMBL	ENST00000296658.3	protein_coding	10307625,10290548,10288422,10286354,10282197,10279277	10308026,10290781,10288529,10286496,10282288,10280632	Gene ID= ENSG00000164237.8 TPM= 15.93 Transcript Type= protein_coding
chr5	10352701	10353601	10352701	10353601	-	ENST00000561606.1@AC012640.2	ENST00000561606.1	antisense_RNA	10352701	10353601	Gene ID= ENSG00000259802.1 TPM= 1.06 Transcript Type= antisense_RNA
chr5	10353703	10433961	10353703	10433961	+	ENST00000449913.6@MARCH6	ENST00000449913.6	protein_coding	10353703,10377798,10378759,10386994,10390332,10391542,10394082,10394753,10397293,10400784,10402059,10402384,10402533,10403407,10405558,10407102,10410139,10411333,10414433,10415488,10417270,10423735,10426390,10429893,10433594	10353917,10377894,10378832,10387066,10390500,10391731,10394143,10394785,10397344,10400842,10402139,10402452,10402607,10403541,10405677,10407202,10410276,10411537,10414502,10415669,10417404,10423824,10426522,10430028,10433961	Gene ID= ENSG00000145495.15 TPM= 4.25 Transcript Type= protein_coding
chr5	10435699	10439323	10435699	10439323	-	transcript403.chr5.nnic@NA	transcript403.chr5.nnic	NA	10435699	10439323	Gene ID= novel_gene_chr5_404 TPM= 78.6 Transcript Type= NA
chr5	10441524	10465024	10441524	10465024	+	ENST00000503804.5@ROPN1L	ENST00000503804.5	protein_coding	10441524,10442127,10448260,10449952,10461184,10464848	10442003,10442298,10448383,10450113,10461359,10465024	Gene ID= ENSG00000145491.11 TPM= 1.06 Transcript Type= protein_coding
chr5	10441876	10465028	10441876	10465028	+	ENST00000274134.4@ROPN1L	ENST00000274134.4	protein_coding	10441876,10448260,10449952,10461184,10464848	10442298,10448383,10450113,10461359,10465028	Gene ID= ENSG00000145491.11 TPM= 2.12 Transcript Type= protein_coding
chr5	10562086	10564112	10562086	10564112	-	transcript407.chr5.nnic@NA	transcript407.chr5.nnic	NA	10562086	10564112	Gene ID= novel_gene_chr5_408 TPM= 2.12 Transcript Type= NA
chr5	10564287	10622064	10564287	10622064	+	transcript411.chr5.nnic@ANKRD33B	transcript411.chr5.nnic	protein_coding	10564287,10618333,10619202	10564833,10618462,10622064	Gene ID= ENSG00000164236.11 TPM= 2.66 Transcript Type= NA
chr5	10564287	10622060	10564287	10622060	+	transcript412.chr5.nic@ANKRD33B	transcript412.chr5.nic	protein_coding	10564287,10618333	10564833,10622060	Gene ID= ENSG00000164236.11 TPM= 2.66 Transcript Type= NA
chr5	10653169	10656988	10653169	10656988	+	transcript413.chr5.nnic@NA	transcript413.chr5.nnic	NA	10653169	10656988	Gene ID= novel_gene_chr5_414 TPM= 4.25 Transcript Type= NA
chr5	10679230	10761272	10679230	10761272	-	ENST00000230895.10@DAP	ENST00000230895.10	protein_coding	10761014,10748175,10683529,10679230	10761272,10748271,10683571,10681169	Gene ID= ENSG00000112977.15 TPM= 169.95 Transcript Type= protein_coding
chr5	10971840	11904504	10971840	11904504	-	transcript419.chr5.nic@CTNND2	transcript419.chr5.nic	protein_coding	11903817,11732136,11564944,11412035,11411536,11397031,11384665,11364696,11346372,11236691,11199448,11159576,11117450,11110858,11098575,11083881,11082696,11022769,11017974,10992551,10988111,10981773,10971840	11904504,11732272,11565056,11412069,11411652,11397203,11385229,11364890,11346627,11236823,11199661,11159759,11117567,11111043,11098748,11083955,11082846,11022979,11018058,10992677,10988242,10981846,10973713	Gene ID= ENSG00000169862.18 TPM= 19.12 Transcript Type= NA
chr5	11519509	11524560	11519509	11524560	-	transcript434.chr5.nnic@NA	transcript434.chr5.nnic	NA	11519509	11524560	Gene ID= novel_gene_chr5_435 TPM= 2.12 Transcript Type= NA
chr5	11862945	11865913	11862945	11865913	+	transcript432.chr5.nnic@NA	transcript432.chr5.nnic	NA	11862945	11865913	Gene ID= novel_gene_chr5_433 TPM= 4.25 Transcript Type= NA
chr5	14143249	14144273	14143249	14144273	-	transcript439.chr5.nnic@NA	transcript439.chr5.nnic	NA	14143249	14144273	Gene ID= novel_gene_chr5_440 TPM= 2.12 Transcript Type= NA
chr5	14421193	14423850	14421193	14423850	-	transcript441.chr5.nnic@NA	transcript441.chr5.nnic	NA	14421193	14423850	Gene ID= novel_gene_chr5_442 TPM= 2.12 Transcript Type= NA
chr5	14430188	14432374	14430188	14432374	-	transcript443.chr5.nnic@NA	transcript443.chr5.nnic	NA	14430188	14432374	Gene ID= novel_gene_chr5_444 TPM= 2.12 Transcript Type= NA
chr5	14440757	14478805	14440757	14478805	+	transcript445.chr5.nic@TRIO	transcript445.chr5.nic	protein_coding	14440757,14461019,14462755,14465545,14471318,14472592,14473994,14476894	14441360,14461311,14462925,14465640,14471466,14472658,14474097,14478805	Gene ID= ENSG00000038382.18 TPM= 4.25 Transcript Type= NA
chr5	14463676	14465217	14463676	14465217	-	transcript447.chr5.nnic@NA	transcript447.chr5.nnic	NA	14463676	14465217	Gene ID= novel_gene_chr5_448 TPM= 6.37 Transcript Type= NA
chr5	14488448	14510203	14488448	14510203	+	ENST00000344135.5@TRIO	ENST00000344135.5	protein_coding	14488448,14492567,14496879,14497847,14498089,14498519,14502579,14504393,14507122,14507880	14489069,14492814,14497017,14497874,14498251,14498640,14502657,14504593,14507260,14510203	Gene ID= ENSG00000038382.18 TPM= 3.19 Transcript Type= protein_coding
chr5	14581775	14612720	14581775	14612720	+	ENST00000274217.3@FAM105A	ENST00000274217.3	protein_coding	14581775,14600965,14601213,14601351,14602183,14607330,14608748,14610141	14581958,14601124,14601244,14601442,14602332,14607458,14609017,14612720	Gene ID= ENSG00000145569.5 TPM= 1.06 Transcript Type= protein_coding
chr5	14663101	14664573	14663101	14664573	-	ENST00000567048.1@AC010491.1	ENST00000567048.1	antisense_RNA	14664434,14663879,14663101	14664573,14664051,14663315	Gene ID= ENSG00000261360.1 TPM= 1.06 Transcript Type= antisense_RNA
chr5	14664660	14688011	14664660	14688011	+	transcript458.chr5.nic@OTULIN	transcript458.chr5.nic	protein_coding	14664660,14673642,14678681,14681464,14687521	14664977,14673718,14678775,14681607,14688011	Gene ID= ENSG00000154124.4 TPM= 4.25 Transcript Type= NA
chr5	14709817	14871962	14709817	14871962	-	transcript465.chr5.nnic@ANKH	transcript465.chr5.nnic	protein_coding	14871855,14871352,14768975,14758480,14755861,14751069,14749172,14745870,14741827,14716706,14713544,14712874,14709817	14871962,14871730,14769191,14758598,14755944,14751239,14749306,14745962,14741922,14716835,14713667,14712973,14711310	Gene ID= ENSG00000154122.12 TPM= 59.48 Transcript Type= NA
chr5	14704804	14871778	14704804	14871778	-	ENST00000284268.6@ANKH	ENST00000284268.6	protein_coding	14871352,14768975,14758480,14755861,14751069,14749172,14745870,14741827,14716706,14713544,14712874,14704804	14871778,14769191,14758598,14755944,14751239,14749306,14745962,14741922,14716835,14713667,14712973,14711310	Gene ID= ENSG00000154122.12 TPM= 22.31 Transcript Type= protein_coding
chr5	15624871	15627089	15624871	15627089	-	transcript496.chr5.nnic@NA	transcript496.chr5.nnic	NA	15624871	15627089	Gene ID= novel_gene_chr5_497 TPM= 3.19 Transcript Type= NA
chr5	15641504	15643003	15641504	15643003	-	transcript498.chr5.nnic@NA	transcript498.chr5.nnic	NA	15641504	15643003	Gene ID= novel_gene_chr5_499 TPM= 2.12 Transcript Type= NA
chr5	15689269	15694126	15689269	15694126	-	transcript500.chr5.nnic@NA	transcript500.chr5.nnic	NA	15689269	15694126	Gene ID= novel_gene_chr5_501 TPM= 4.25 Transcript Type= NA
chr5	15802658	15804834	15802658	15804834	-	transcript502.chr5.nnic@NA	transcript502.chr5.nnic	NA	15802658	15804834	Gene ID= novel_gene_chr5_503 TPM= 2.12 Transcript Type= NA
chr5	15869318	15871740	15869318	15871740	+	transcript504.chr5.nnic@NA	transcript504.chr5.nnic	NA	15869318	15871740	Gene ID= novel_gene_chr5_505 TPM= 2.12 Transcript Type= NA
chr5	15927888	15939795	15927888	15939795	+	ENST00000329673.8@FBXL7	ENST00000329673.8	protein_coding	15927888,15936450	15928501,15939795	Gene ID= ENSG00000183580.9 TPM= 23.37 Transcript Type= protein_coding
chr5	16451519	16465792	16451519	16465792	-	ENST00000308683.2@ZNF622	ENST00000308683.2	protein_coding	16465041,16463482,16463108,16458517,16453013,16451519	16465792,16463742,16463270,16458629,16453156,16451784	Gene ID= ENSG00000173545.4 TPM= 122.15 Transcript Type= protein_coding
chr5	16473053	16508998	16473053	16508998	-	ENST00000399793.6@RETREG1	ENST00000399793.6	protein_coding	16508578,16483346,16481009,16478850,16478034,16477662,16473053	16508998,16483472,16481093,16478987,16478098,16477788,16475234	Gene ID= ENSG00000154153.13 TPM= 13.81 Transcript Type= protein_coding
chr5	16665286	16936263	16665286	16936263	-	ENST00000513610.5@MYO10	ENST00000513610.5	protein_coding	16935788,16877609,16818009,16794646,16783335,16781705,16780728,16780524,16779545,16769074,16766080,16764250,16763655,16763481,16762545,16762045,16761464,16758118,16754828,16711121,16710908,16704579,16702925,16702543,16700963,16699450,16694371,16689824,16685738,16683880,16681871,16681309,16679947,16676031,16674853,16673682,16672689,16671422,16670526,16668277,16665286	16936263,16877707,16818167,16794833,16783469,16781829,16780741,16780608,16779648,16769203,16766198,16764396,16763755,16763547,16762637,16762113,16761546,16758226,16754908,16711245,16711022,16704685,16703158,16702588,16701838,16699573,16694614,16689919,16685831,16683935,16682013,16681503,16680104,16676154,16675150,16673889,16672825,16671542,16670978,16668468,16666793	Gene ID= ENSG00000145555.14 TPM= 2.12 Transcript Type= protein_coding
chr5	17353695	17354624	17353695	17354624	-	ENST00000401830.3@FTH1P10	ENST00000401830.3	transcribed_processed_pseudogene	17353695	17354624	Gene ID= ENSG00000223361.5 TPM= 417.43 Transcript Type= processed_transcript
chr5	21459452	21589372	21459452	21589372	+	transcript535.chr5.nnic@GUSBP1	transcript535.chr5.nnic	transcribed_unprocessed_pseudogene	21459452,21459678,21461783,21501692,21502111,21585530	21459584,21459743,21461866,21501826,21502203,21589372	Gene ID= ENSG00000183666.16 TPM= 2.84 Transcript Type= NA
chr5	21459452	21474452	21459452	21474452	+	transcript537.chr5.nnic@GUSBP1	transcript537.chr5.nnic	transcribed_unprocessed_pseudogene	21459452,21459678,21461783,21471462,21473357	21459584,21459743,21461866,21471646,21474452	Gene ID= ENSG00000183666.16 TPM= 8.15 Transcript Type= NA
chr5	21459513	21474439	21459513	21474439	+	ENST00000508973.5@GUSBP1	ENST00000508973.5	transcribed_unprocessed_pseudogene	21459513,21459678,21461783,21473357	21459584,21459743,21461866,21474439	Gene ID= ENSG00000183666.16 TPM= 4.96 Transcript Type= processed_transcript
chr5	24200193	24202648	24200193	24202648	+	transcript541.chr5.nnic@NA	transcript541.chr5.nnic	NA	24200193	24202648	Gene ID= novel_gene_chr5_542 TPM= 2.12 Transcript Type= NA
chr5	25101018	25190657	25101018	25190657	-	ENST00000641261.1@LINC02228	ENST00000641261.1	lincRNA	25190447,25167162,25162230,25136342,25101018	25190657,25167191,25162269,25136445,25103121	Gene ID= ENSG00000251273.2 TPM= 3.19 Transcript Type= lincRNA
chr5	25216215	25219381	25216215	25219381	-	transcript547.chr5.nnic@NA	transcript547.chr5.nnic	NA	25216215	25219381	Gene ID= novel_gene_chr5_548 TPM= 3.19 Transcript Type= NA
chr5	31401134	31532109	31401134	31532109	-	ENST00000513349.5@DROSHA	ENST00000513349.5	protein_coding	31531990,31531450,31530798,31529040,31526079,31521123,31514988,31511035,31508621,31504555,31495286,31493207,31486491,31484881,31483554,31472063,31467939,31466182,31464236,31451533,31449281,31448547,31437239,31435765,31431576,31429475,31424427,31422787,31421272,31410746,31409250,31409056,31406853,31405677,31401134	31532109,31531525,31530924,31529105,31526912,31521215,31515219,31511176,31508775,31504635,31495372,31493293,31486562,31484962,31483628,31472232,31468063,31466281,31464343,31451640,31449419,31448607,31437298,31435864,31431678,31429545,31424471,31422944,31421377,31410887,31409332,31409159,31406945,31405723,31401562	Gene ID= ENSG00000113360.16 TPM= 5.31 Transcript Type= protein_coding
chr5	31532277	31554808	31532277	31554808	+	transcript554.chr5.nic@C5orf22	transcript554.chr5.nic	protein_coding	31532277,31534272,31535744,31538260,31540949,31541281,31545646,31551293,31552773	31532473,31534325,31535893,31538689,31541011,31541402,31545712,31551432,31554808	Gene ID= ENSG00000082213.17 TPM= 2.84 Transcript Type= NA
chr5	31532266	31555058	31532266	31555058	+	ENST00000325366.13@C5orf22	ENST00000325366.13	protein_coding	31532266,31534272,31535744,31538260,31540949,31541281,31545646,31551293,31552773	31532473,31534417,31535893,31538689,31541011,31541402,31545712,31551432,31555058	Gene ID= ENSG00000082213.17 TPM= 2.84 Transcript Type= protein_coding
chr5	31532287	31554808	31532287	31554808	+	ENST00000510659.5@C5orf22	ENST00000510659.5	protein_coding	31532287,31534272,31535744,31538484,31540949,31541281,31545646,31551293,31552773	31532473,31534417,31535893,31538689,31541011,31541402,31545712,31551432,31554808	Gene ID= ENSG00000082213.17 TPM= 3.9 Transcript Type= nonsense_mediated_decay
chr5	31639410	32110931	31639410	32110931	+	ENST00000438447.1@PDZD2	ENST00000438447.1	protein_coding	31639410,31798889,31983155,31995576,32000139,32010330,32037231,32048539,32052611,32053769,32057655,32057878,32059239,32061002,32069569,32071384,32072161,32073832,32077462,32087131,32092907,32097279,32098364,32101105,32107969	31639437,31799724,31983656,31995718,32000271,32010482,32037342,32048684,32052730,32053883,32057728,32058103,32059356,32061134,32069650,32071418,32072317,32074643,32077606,32091175,32093024,32097380,32098634,32101239,32110931	Gene ID= ENSG00000133401.15 TPM= 30.8 Transcript Type= protein_coding
chr5	31639134	31646525	31639134	31646525	+	transcript563.chr5.nnic@PDZD2	transcript563.chr5.nnic	protein_coding	31639134,31646141,31646438	31639437,31646255,31646525	Gene ID= ENSG00000133401.15 TPM= 4.25 Transcript Type= NA
chr5	31689355	31692569	31689355	31692569	-	transcript569.chr5.nnic@NA	transcript569.chr5.nnic	NA	31689355	31692569	Gene ID= novel_gene_chr5_570 TPM= 7.44 Transcript Type= NA
chr5	32102233	32104410	32102233	32104410	+	transcript567.chr5.nnic@NA	transcript567.chr5.nnic	NA	32102233	32104410	Gene ID= novel_gene_chr5_568 TPM= 2.12 Transcript Type= NA
chr5	32124704	32174350	32124704	32174350	-	ENST00000265070.6@GOLPH3	ENST00000265070.6	protein_coding	32173810,32143749,32135572,32124704	32174350,32143880,32135686,32126636	Gene ID= ENSG00000113384.13 TPM= 138.08 Transcript Type= protein_coding
chr5	32152510	32155111	32152510	32155111	+	transcript576.chr5.nnic@NA	transcript576.chr5.nnic	NA	32152510	32155111	Gene ID= novel_gene_chr5_577 TPM= 5.31 Transcript Type= NA
chr5	32174080	32175271	32174080	32175271	+	transcript578.chr5.nnic@NA	transcript578.chr5.nnic	NA	32174080	32175271	Gene ID= novel_gene_chr5_579 TPM= 2.12 Transcript Type= NA
chr5	32229639	32313008	32229639	32313008	-	transcript580.chr5.nic@MTMR12	transcript580.chr5.nic	protein_coding	32312758,32276682,32273980,32271833,32270817,32268701,32263113,32255693,32248772,32248002,32243521,32242057,32239001,32234962,32233773,32232961,32229639	32313008,32276742,32274122,32271905,32270947,32268794,32263242,32255768,32248878,32248126,32243599,32242127,32239173,32235129,32233934,32233020,32230347	Gene ID= ENSG00000150712.10 TPM= 3.19 Transcript Type= NA
chr5	32227006	32313009	32227006	32313009	-	ENST00000382142.7@MTMR12	ENST00000382142.7	protein_coding	32312758,32276682,32273980,32271833,32270817,32268701,32263113,32255693,32248772,32248002,32243521,32242057,32239001,32234962,32233773,32227006	32313009,32276742,32274122,32271905,32270947,32268794,32263242,32255768,32248878,32248126,32243599,32242127,32239173,32235129,32233934,32230347	Gene ID= ENSG00000150712.10 TPM= 64.79 Transcript Type= protein_coding
chr5	32233698	32312949	32233698	32312949	-	transcript588.chr5.nnic@MTMR12	transcript588.chr5.nnic	protein_coding	32312758,32276682,32273980,32271833,32270817,32268701,32263113,32255693,32248772,32248002,32243521,32242057,32239001,32233698	32312949,32276742,32274122,32271905,32270947,32268794,32263242,32255768,32248878,32248126,32243599,32242127,32239173,32233934	Gene ID= ENSG00000150712.10 TPM= 2.12 Transcript Type= NA
chr5	32310879	32312949	32310879	32312949	-	transcript590.chr5.nnic@NA	transcript590.chr5.nnic	NA	32310879	32312949	Gene ID= novel_gene_chr5_591 TPM= 3.19 Transcript Type= NA
chr5	32354350	32444532	32354350	32444532	-	transcript597.chr5.nic@ZFR	transcript597.chr5.nic	protein_coding	32444229,32419821,32417648,32414969,32406774,32403906,32403106,32400007,32397219,32395159,32390275,32388469,32387549,32385508,32380075,32379115,32364164,32363948,32354350	32444532,32420103,32417792,32415187,32407021,32404097,32403397,32400203,32397338,32395304,32390437,32388674,32387699,32385649,32380172,32379210,32364275,32364045,32355939	Gene ID= ENSG00000056097.15 TPM= 4.25 Transcript Type= NA
chr5	32404056	32444757	32404056	32444757	-	transcript607.chr5.nic@ZFR	transcript607.chr5.nic	protein_coding	32444622,32444229,32419821,32417648,32414969,32406774,32404056	32444757,32444328,32420103,32417792,32415187,32407021,32404097	Gene ID= ENSG00000056097.15 TPM= 23.58 Transcript Type= NA
chr5	32354350	32444761	32354350	32444761	-	ENST00000265069.12@ZFR	ENST00000265069.12	protein_coding	32444622,32444229,32419821,32417648,32414969,32406774,32403906,32403106,32400007,32397219,32395159,32390275,32388469,32387549,32385508,32380075,32379115,32364164,32363948,32354350	32444761,32444328,32420103,32417792,32415187,32407021,32404097,32403397,32400203,32397338,32395304,32390437,32388674,32387699,32385649,32380172,32379210,32364275,32364045,32355939	Gene ID= ENSG00000056097.15 TPM= 87.31 Transcript Type= protein_coding
chr5	32406727	32444738	32406727	32444738	-	ENST00000505366.1@ZFR	ENST00000505366.1	protein_coding	32444622,32444229,32419821,32417648,32414969,32406727	32444738,32444328,32420103,32417792,32415187,32407021	Gene ID= ENSG00000056097.15 TPM= 3.4 Transcript Type= retained_intron
chr5	32400753	32402626	32400753	32402626	+	transcript614.chr5.nnic@NA	transcript614.chr5.nnic	NA	32400753	32402626	Gene ID= novel_gene_chr5_615 TPM= 5.31 Transcript Type= NA
chr5	32419531	32422820	32419531	32422820	+	transcript616.chr5.nnic@NA	transcript616.chr5.nnic	NA	32419531	32422820	Gene ID= novel_gene_chr5_617 TPM= 5.31 Transcript Type= NA
chr5	32585499	32604079	32585499	32604079	+	ENST00000265073.8@SUB1	ENST00000265073.8	protein_coding	32585499,32588512,32591563,32598961,32601005	32585625,32588584,32591685,32599069,32604079	Gene ID= ENSG00000113387.11 TPM= 37.18 Transcript Type= protein_coding
chr5	32709407	32786826	32709407	32786826	+	ENST00000434067.6@NPR3	ENST00000434067.6	protein_coding	32709407,32724698,32738864,32774708,32780722,32782893,32784796,32786234	32710783,32724820,32739030,32774843,32780816,32783028,32784883,32786826	Gene ID= ENSG00000113389.15 TPM= 1.06 Transcript Type= protein_coding
chr5	32710637	32791724	32710637	32791724	+	ENST00000326958.5@NPR3	ENST00000326958.5	protein_coding	32710637,32724698,32738864,32774708,32780722,32782893,32784799,32786234	32710783,32724820,32739030,32774843,32780816,32783028,32784883,32791724	Gene ID= ENSG00000113389.15 TPM= 31.86 Transcript Type= protein_coding
chr5	33440776	33469539	33440776	33469539	+	ENST00000265112.7@TARS	ENST00000265112.7	protein_coding	33440776,33445324,33448541,33453289,33454945,33455587,33456002,33456149,33457257,33458566,33459695,33460902,33461158,33461667,33461906,33462099,33463753,33466871,33467560	33441143,33445404,33448731,33453412,33455066,33455704,33456066,33456227,33457403,33458664,33459861,33461064,33461295,33461744,33462006,33462203,33463825,33466985,33469539	Gene ID= ENSG00000113407.13 TPM= 7.44 Transcript Type= protein_coding
chr5	33440964	33468085	33440964	33468085	+	ENST00000508361.5@TARS	ENST00000508361.5	protein_coding	33440964,33445324,33453289,33454945,33455587,33456002,33456149,33457257,33458566,33459695,33460902,33461158,33461667,33461906,33462099,33463753,33466871,33467560	33441143,33445404,33453412,33455066,33455704,33456066,33456227,33457403,33458664,33459861,33461064,33461295,33461744,33462006,33462203,33463825,33466985,33468085	Gene ID= ENSG00000113407.13 TPM= 8.5 Transcript Type= nonsense_mediated_decay
chr5	34019448	34043832	34019448	34043832	-	ENST00000382065.7@C1QTNF3	ENST00000382065.7	protein_coding	34042823,34035647,34033304,34028754,34023909,34019448	34043832,34035758,34033458,34028883,34024008,34020742	Gene ID= ENSG00000082196.20 TPM= 1.06 Transcript Type= protein_coding
chr5	34019453	34043213	34019453	34043213	-	ENST00000231338.7@C1QTNF3	ENST00000231338.7	protein_coding	34043042,34035647,34033304,34028754,34023909,34019453	34043213,34035758,34033458,34028883,34024008,34020742	Gene ID= ENSG00000082196.20 TPM= 3.19 Transcript Type= protein_coding
chr5	34656237	34832627	34656237	34832627	+	ENST00000265109.7@RAI14	ENST00000265109.7	protein_coding	34656237,34686872,34757468,34795939,34803712,34807800,34808584,34811012,34811767,34812180,34813574,34814583,34818797,34821732,34822956,34826330,34829732,34830688	34656475,34686955,34757598,34796027,34803776,34807857,34808654,34811118,34811945,34812208,34813660,34814669,34818851,34821850,34824491,34826479,34829797,34832627	Gene ID= ENSG00000039560.13 TPM= 4.25 Transcript Type= protein_coding
chr5	34656527	34832611	34656527	34832611	+	transcript661.chr5.nic@RAI14	transcript661.chr5.nic	protein_coding	34656527,34686872,34757468,34795939,34803712,34807800,34808584,34811012,34811767,34812180,34814583,34818797,34821732,34822956,34826330,34829732,34830688	34656696,34686955,34757598,34796027,34803776,34807857,34808654,34811118,34811945,34812208,34814669,34818851,34821850,34824491,34826479,34829797,34832611	Gene ID= ENSG00000039560.13 TPM= 3.19 Transcript Type= NA
chr5	34656411	34757868	34656411	34757868	+	ENST00000514931.5@RAI14	ENST00000514931.5	protein_coding	34656411,34686872,34757468	34656475,34686955,34757868	Gene ID= ENSG00000039560.13 TPM= 1.06 Transcript Type= retained_intron
chr5	34908554	34929810	34908554	34929810	-	transcript702.chr5.nnic@RAD1	transcript702.chr5.nnic	protein_coding	34929649,34914695,34913470,34911554,34909258,34908554	34929810,34914961,34913578,34911812,34909356,34908948	Gene ID= ENSG00000113456.18 TPM= 2.12 Transcript Type= NA
chr5	34908341	34915995	34908341	34915995	-	transcript704.chr5.nic@RAD1	transcript704.chr5.nic	protein_coding	34914695,34913470,34911554,34909258,34908341	34915995,34913578,34911812,34909356,34908948	Gene ID= ENSG00000113456.18 TPM= 2.12 Transcript Type= NA
chr5	34908554	34915548	34908554	34915548	-	ENST00000325577.8@RAD1	ENST00000325577.8	protein_coding	34915416,34914695,34911554,34909258,34908554	34915548,34914961,34911812,34909356,34908948	Gene ID= ENSG00000113456.18 TPM= 7.44 Transcript Type= nonsense_mediated_decay
chr5	34907265	34908462	34907265	34908462	-	transcript708.chr5.nnic@NA	transcript708.chr5.nnic	NA	34907265	34908462	Gene ID= novel_gene_chr5_709 TPM= 4.25 Transcript Type= NA
chr5	34915376	34925996	34915376	34925996	+	ENST00000336767.5@BRIX1	ENST00000336767.5	protein_coding	34915376,34918364,34919840,34922217,34922539,34922695,34923001,34923133,34924847,34925226	34915897,34918475,34919883,34922287,34922588,34922768,34923051,34923234,34924975,34925996	Gene ID= ENSG00000113460.12 TPM= 28.68 Transcript Type= protein_coding
chr5	34915716	34921925	34915716	34921925	+	ENST00000510834.1@BRIX1	ENST00000510834.1	protein_coding	34915716,34918364,34919840	34915897,34918475,34921925	Gene ID= ENSG00000113460.12 TPM= 1.06 Transcript Type= retained_intron
chr5	34929539	34953941	34929539	34953941	+	transcript689.chr5.nic@DNAJC21	transcript689.chr5.nic	protein_coding	34929539,34933815,34935710,34936144,34937326,34938858,34941096,34944867,34945761,34950170,34953926	34929916,34933908,34935833,34936266,34937630,34939009,34941183,34945025,34945803,34950342,34953941	Gene ID= ENSG00000168724.14 TPM= 6.37 Transcript Type= NA
chr5	34929593	34955200	34929593	34955200	+	ENST00000342382.8@DNAJC21	ENST00000342382.8	protein_coding	34929593,34933815,34935710,34936144,34937326,34938858,34941096,34944867,34945761,34950170,34953926,34954553	34929916,34933908,34935833,34936266,34937630,34939009,34941183,34945025,34945803,34950342,34954001,34955200	Gene ID= ENSG00000168724.14 TPM= 27.62 Transcript Type= protein_coding
chr5	35617844	35671575	35617844	35671575	+	ENST00000282469.10@SPEF2	ENST00000282469.10	protein_coding	35617844,35628460,35641431,35644355,35646667,35649361,35654540,35659019,35667072,35670059	35618055,35628562,35641683,35644525,35646807,35649425,35654726,35659207,35667259,35671575	Gene ID= ENSG00000152582.13 TPM= 1.06 Transcript Type= protein_coding
chr5	36098412	36151961	36098412	36151961	-	ENST00000296603.4@LMBRD2	ENST00000296603.4	protein_coding	36151556,36143176,36142502,36141107,36137274,36136309,36124191,36122848,36122280,36117735,36116460,36115015,36114424,36111155,36109945,36108534,36105068,36098412	36151961,36143406,36142599,36141202,36137441,36136519,36124265,36122961,36122463,36117916,36116593,36115120,36114521,36111258,36109991,36108639,36105197,36104106	Gene ID= ENSG00000164187.6 TPM= 3.19 Transcript Type= protein_coding
chr5	36152067	36184319	36152067	36184319	+	ENST00000274255.10@SKP2	ENST00000274255.10	protein_coding	36152067,36152771,36163645,36166519,36168313,36170344,36171603,36176965,36177185,36181818	36152270,36153042,36163756,36166662,36168447,36170442,36171733,36177016,36177292,36184319	Gene ID= ENSG00000145604.15 TPM= 2.12 Transcript Type= protein_coding
chr5	36192885	36241925	36192885	36241925	-	transcript721.chr5.nic@NADK2	transcript721.chr5.nic	protein_coding	36241499,36227477,36226475,36225542,36219596,36217748,36211844,36208625,36207170,36201106,36200227,36197541,36192885	36241925,36227565,36226563,36225623,36219679,36217884,36211922,36208690,36207265,36201161,36200280,36197664,36195282	Gene ID= ENSG00000152620.12 TPM= 13.81 Transcript Type= NA
chr5	36193713	36242142	36193713	36242142	-	ENST00000282512.7@NADK2	ENST00000282512.7	protein_coding	36242096,36227477,36226475,36225542,36219596,36217748,36211844,36207170,36201106,36200227,36197541,36193713	36242142,36227565,36226563,36225623,36219679,36217884,36211922,36207265,36201161,36200280,36197664,36195282	Gene ID= ENSG00000152620.12 TPM= 1.06 Transcript Type= protein_coding
chr5	36234639	36236885	36234639	36236885	+	transcript728.chr5.nnic@NA	transcript728.chr5.nnic	NA	36234639	36236885	Gene ID= novel_gene_chr5_729 TPM= 4.25 Transcript Type= NA
chr5	36606355	36688334	36606355	36688334	+	ENST00000265113.8@SLC1A3	ENST00000265113.8	protein_coding	36606355,36608329,36629450,36671029,36674049,36676892,36679627,36680395,36683864,36686065	36606735,36608604,36629587,36671233,36674091,36677184,36679860,36680589,36683998,36688334	Gene ID= ENSG00000079215.13 TPM= 19.12 Transcript Type= protein_coding
chr5	36630184	36635185	36630184	36635185	+	transcript736.chr5.nnic@NA	transcript736.chr5.nnic	NA	36630184	36635185	Gene ID= novel_gene_chr5_737 TPM= 3.19 Transcript Type= NA
chr5	36871365	36876421	36871365	36876421	-	transcript738.chr5.nnic@NA	transcript738.chr5.nnic	NA	36871365	36876421	Gene ID= novel_gene_chr5_739 TPM= 16.99 Transcript Type= NA
chr5	36876759	37066413	36876759	37066413	+	ENST00000282516.12@NIPBL	ENST00000282516.12	protein_coding	36876759,36953618,36955472,36958104,36961484,36962123,36970876,36971945,36975776,36984676,36995622,37000373,37000817,37000989,37002662,37003261,37006357,37007323,37008008,37008623,37010087,37014683,37016038,37017019,37019311,37020459,37020775,37022051,37022244,37024585,37026229,37027359,37036379,37038602,37044347,37044636,37045443,37046109,37048502,37049111,37051779,37052366,37057186,37058891,37060844,37063790,37064527	36877178,36953760,36955637,36958231,36961583,36962274,36971036,36972041,36976402,36986301,36995804,37000570,37000888,37001078,37002765,37003347,37006588,37007474,37008088,37008723,37010225,37014765,37016170,37017162,37019400,37020673,37020877,37022149,37022390,37024719,37026327,37027412,37036487,37038738,37044487,37044729,37045597,37046199,37048675,37049301,37051886,37052566,37057332,37059165,37061018,37063978,37066413	Gene ID= ENSG00000164190.17 TPM= 12.75 Transcript Type= protein_coding
chr5	37247800	37249379	37247800	37249379	-	transcript751.chr5.nnic@NA	transcript751.chr5.nnic	NA	37247800	37249379	Gene ID= novel_gene_chr5_752 TPM= 2.12 Transcript Type= NA
chr5	37289841	37371113	37289841	37371113	-	transcript753.chr5.nnic@NUP155	transcript753.chr5.nnic	protein_coding	37370666,37364247,37363888,37358081,37352737,37351190,37350160,37349172,37348505,37342549,37341090,37337818,37333463,37331685,37330038,37329190,37328358,37327629,37325901,37323992,37317988,37314198,37310552,37309129,37307297,37305057,37304739,37303260,37302779,37301437,37299448,37298868,37294329,37292879,37291537,37289841	37371113,37364384,37363984,37358151,37352829,37351356,37350265,37349245,37348596,37342646,37341242,37337918,37333633,37331795,37330132,37329278,37328420,37327776,37325967,37324107,37318085,37314328,37310743,37309267,37307432,37305210,37304843,37303414,37302908,37301550,37299568,37298978,37294465,37292985,37292038,37290284	Gene ID= ENSG00000113569.15 TPM= 2.12 Transcript Type= NA
chr5	37288137	37371181	37288137	37371181	-	ENST00000231498.7@NUP155	ENST00000231498.7	protein_coding	37370821,37364247,37363888,37358081,37352737,37351190,37350160,37349172,37348505,37342549,37341090,37337818,37333463,37331685,37330038,37329190,37328358,37327629,37325901,37323992,37317988,37314198,37310552,37309129,37307297,37305057,37304739,37303260,37302779,37301437,37299448,37298868,37294329,37292879,37288137	37371181,37364384,37363984,37358151,37352829,37351356,37350265,37349245,37348596,37342646,37341242,37337918,37333633,37331795,37330132,37329278,37328420,37327776,37325967,37324107,37318085,37314328,37310743,37309267,37307432,37305210,37304843,37303414,37302908,37301550,37299568,37298978,37294465,37292985,37292038	Gene ID= ENSG00000113569.15 TPM= 4.25 Transcript Type= protein_coding
chr5	37379212	37753435	37379212	37753435	+	ENST00000265107.8@WDR70	ENST00000265107.8	protein_coding	37379212,37379489,37381602,37392000,37396375,37437922,37443239,37479834,37516514,37605064,37697655,37701058,37702949,37721115,37722855,37724934,37726883,37752486	37379392,37379554,37381685,37392120,37396570,37437981,37443372,37479987,37516590,37605238,37697754,37701142,37703087,37721215,37722934,37725050,37727045,37753435	Gene ID= ENSG00000082068.8 TPM= 6.37 Transcript Type= protein_coding
chr5	38445540	38464556	38445540	38464556	+	ENST00000397210.7@EGFLAM	ENST00000397210.7	protein_coding	38445540,38448301,38451315,38458311,38462908,38463832	38445702,38448379,38451458,38458394,38463011,38464556	Gene ID= ENSG00000164318.17 TPM= 4.25 Transcript Type= protein_coding
chr5	38556773	38558181	38556773	38558181	+	transcript768.chr5.nnic@NA	transcript768.chr5.nnic	NA	38556773	38558181	Gene ID= novel_gene_chr5_769 TPM= 2.12 Transcript Type= NA
chr5	38845858	38886657	38845858	38886657	+	ENST00000502536.5@OSMR	ENST00000502536.5	protein_coding	38845858,38869032,38876201,38881593,38883827,38885349,38886039	38846126,38869117,38876373,38881764,38884111,38885484,38886657	Gene ID= ENSG00000145623.12 TPM= 1.06 Transcript Type= protein_coding
chr5	38864542	38867080	38864542	38867080	-	transcript773.chr5.nnic@NA	transcript773.chr5.nnic	NA	38864542	38867080	Gene ID= novel_gene_chr5_774 TPM= 2.12 Transcript Type= NA
chr5	38937919	39074408	38937919	39074408	-	ENST00000357387.7@RICTOR	ENST00000357387.7	protein_coding	39074329,39074111,39021039,39003558,39002535,38996819,38990949,38981867,38978583,38975537,38971877,38967943,38967337,38967161,38966641,38964792,38962876,38962485,38962315,38960398,38959779,38959195,38958667,38958443,38957652,38955595,38954774,38953461,38952985,38952196,38949712,38947264,38946468,38945491,38944913,38944446,38942833,38937919	39074408,39074158,39021136,39003622,39002666,38996882,38991075,38982036,38978650,38975604,38971959,38968030,38967427,38967227,38966721,38964892,38963041,38962586,38962361,38960533,38959978,38959321,38958831,38958519,38957730,38955704,38954861,38953553,38953091,38952425,38950720,38947441,38946552,38945724,38945068,38944569,38942971,38942378	Gene ID= ENSG00000164327.12 TPM= 14.87 Transcript Type= protein_coding
chr5	38940015	39074389	38940015	39074389	-	ENST00000511516.5@RICTOR	ENST00000511516.5	protein_coding	39074329,39074111,39021039,39003558,39002535,38996819,38990949,38981867,38978583,38975537,38971877,38967943,38967337,38967161,38966641,38964792,38962876,38962485,38962315,38960398,38959779,38959195,38958667,38958443,38957652,38955595,38954774,38953461,38952985,38952196,38949712,38947264,38946468,38945491,38944913,38944446,38942833,38940015	39074389,39074158,39021136,39003622,39002666,38996882,38991075,38982036,38978648,38975604,38971959,38968030,38967427,38967227,38966721,38964892,38963041,38962586,38962361,38960533,38959978,38959321,38958831,38958519,38957730,38955704,38954861,38953553,38953091,38952425,38950720,38947441,38946552,38945610,38945068,38944569,38942971,38942378	Gene ID= ENSG00000164327.12 TPM= 1.59 Transcript Type= nonsense_mediated_decay
chr5	38940020	39074399	38940020	39074399	-	ENST00000296782.9@RICTOR	ENST00000296782.9	protein_coding	39074329,39074111,39021039,39003558,39002535,38996819,38990949,38981867,38978583,38975537,38971877,38967943,38967337,38967161,38966641,38964792,38962876,38962485,38962315,38960398,38959779,38959195,38958667,38958443,38957652,38955595,38954774,38953461,38952985,38952196,38949712,38949356,38947264,38946468,38945491,38944913,38944446,38942833,38940020	39074399,39074158,39021136,39003622,39002666,38996882,38991075,38982036,38978650,38975604,38971959,38968030,38967427,38967227,38966721,38964892,38963041,38962586,38962361,38960533,38959978,38959321,38958831,38958519,38957730,38955704,38954861,38953553,38953091,38952425,38950720,38949427,38947441,38946552,38945724,38945068,38944569,38942971,38942378	Gene ID= ENSG00000164327.12 TPM= 2.66 Transcript Type= protein_coding
chr5	39016455	39017554	39016455	39017554	+	transcript781.chr5.nnic@NA	transcript781.chr5.nnic	NA	39016455	39017554	Gene ID= novel_gene_chr5_782 TPM= 2.12 Transcript Type= NA
chr5	39074464	39075567	39074464	39075567	+	transcript783.chr5.nnic@NA	transcript783.chr5.nnic	NA	39074464	39075567	Gene ID= novel_gene_chr5_784 TPM= 2.12 Transcript Type= NA
chr5	39371675	39425233	39371675	39425233	-	ENST00000545653.5@DAB2	ENST00000545653.5	protein_coding	39424804,39394230,39393254,39392365,39390444,39389852,39389097,39388799,39382618,39381454,39376650,39375997,39375014,39371675	39425233,39394421,39393393,39392463,39390575,39389932,39389123,39388852,39383271,39381616,39377282,39376106,39375084,39373425	Gene ID= ENSG00000153071.14 TPM= 2.12 Transcript Type= protein_coding
chr5	39520431	39524708	39520431	39524708	+	ENST00000604954.5@LINC02104	ENST00000604954.5	lincRNA	39520431,39521519,39524251	39520462,39521627,39524708	Gene ID= ENSG00000271334.5 TPM= 1.06 Transcript Type= lincRNA
chr5	40714475	40755975	40714475	40755975	-	ENST00000337702.4@TTC33	ENST00000337702.4	protein_coding	40755824,40746798,40730262,40728345,40714475	40755975,40747019,40730343,40728476,40716498	Gene ID= ENSG00000113638.13 TPM= 24.43 Transcript Type= protein_coding
chr5	40679498	40693735	40679498	40693735	+	ENST00000302472.3@PTGER4	ENST00000302472.3	protein_coding	40679498,40680951,40691779	40680478,40681860,40693735	Gene ID= ENSG00000171522.5 TPM= 5.31 Transcript Type= protein_coding
chr5	40827733	40835259	40827733	40835259	-	transcript810.chr5.nnic@RPL37	transcript810.chr5.nnic	protein_coding	40835183,40834471,40834181,40832442,40827733	40835259,40834606,40834265,40832573,40827951	Gene ID= ENSG00000145592.13 TPM= 3.19 Transcript Type= NA
chr5	40825262	40835335	40825262	40835335	-	ENST00000274242.9@RPL37	ENST00000274242.9	protein_coding	40835183,40834471,40834181,40825262	40835335,40834606,40834265,40832573	Gene ID= ENSG00000145592.13 TPM= 61.61 Transcript Type= protein_coding
chr5	40841184	40855354	40841184	40855354	+	ENST00000254691.9@CARD6	ENST00000254691.9	protein_coding	40841184,40843152,40852174	40841665,40843709,40855354	Gene ID= ENSG00000132357.13 TPM= 2.12 Transcript Type= protein_coding
chr5	40909252	40982939	40909252	40982939	+	ENST00000313164.9@C7	ENST00000313164.9	protein_coding	40909252,40928580,40931064,40934325,40936338,40937552,40945198,40947602,40949904,40955387,40958033,40959449,40962085,40964741,40972403,40976750,40979725,40981392	40909616,40928635,40931139,40934466,40936485,40937690,40945368,40947845,40950014,40955553,40958261,40959620,40962172,40964873,40972594,40976840,40979909,40982939	Gene ID= ENSG00000112936.18 TPM= 70.1 Transcript Type= protein_coding
chr5	41509172	41510633	41509172	41510633	-	transcript828.chr5.nnic@NA	transcript828.chr5.nnic	NA	41509172	41510633	Gene ID= novel_gene_chr5_829 TPM= 9.56 Transcript Type= NA
chr5	41730065	41870519	41730065	41870519	-	ENST00000196371.9@OXCT1	ENST00000196371.9	protein_coding	41870281,41862642,41861314,41853419,41850030,41842675,41840451,41807331,41805567,41803069,41801022,41794677,41794003,41762111,41749527,41739390,41730065	41870519,41862750,41861404,41853554,41850179,41842781,41840511,41807438,41805681,41803163,41801070,41794749,41794078,41762200,41749607,41739491,41731770	Gene ID= ENSG00000083720.12 TPM= 804.06 Transcript Type= protein_coding
chr5	41904349	41921636	41904349	41921636	+	ENST00000381647.6@C5orf51	ENST00000381647.6	protein_coding	41904349,41907736,41909746,41911048,41912069,41917016	41904467,41907842,41909892,41911179,41912183,41921636	Gene ID= ENSG00000205765.8 TPM= 10.62 Transcript Type= protein_coding
chr5	41925234	42040400	41925234	42040400	+	transcript880.chr5.nnic@FBXO4	transcript880.chr5.nnic	protein_coding	41925234,41927013,41929697,41933946,41934133,42039916	41925498,41927248,41929917,41934021,41934308,42040400	Gene ID= ENSG00000151876.12 TPM= 2.12 Transcript Type= NA
chr5	41925301	41941568	41925301	41941568	+	ENST00000509134.1@FBXO4	ENST00000509134.1	protein_coding	41925301,41927013,41929697,41933946,41934133,41941192	41925498,41927248,41929917,41934021,41934308,41941568	Gene ID= ENSG00000151876.12 TPM= 1.06 Transcript Type= protein_coding
chr5	42473748	42474258	42473748	42474258	+	transcript883.chr5.nnic@NA	transcript883.chr5.nnic	NA	42473748	42474258	Gene ID= novel_gene_chr5_884 TPM= 2.12 Transcript Type= NA
chr5	42719958	42721822	42719958	42721822	+	transcript885.chr5.nnic@NA	transcript885.chr5.nnic	NA	42719958	42721822	Gene ID= novel_gene_chr5_886 TPM= 5.31 Transcript Type= NA
chr5	42756801	42802360	42756801	42802360	+	ENST00000361970.9@CCDC152	ENST00000361970.9	protein_coding	42756801,42759120,42762443,42769597,42779458,42783474,42796829,42799375,42799659	42756885,42759208,42762548,42769665,42779522,42783576,42796956,42799458,42802360	Gene ID= ENSG00000198865.9 TPM= 1.06 Transcript Type= protein_coding
chr5	42800112	42811892	42800112	42811892	-	ENST00000511224.5@SELENOP	ENST00000511224.5	protein_coding	42811836,42809760,42808151,42806896,42804656,42800112	42811892,42809788,42808366,42807108,42804773,42801331	Gene ID= ENSG00000250722.5 TPM= 14.87 Transcript Type= protein_coding
chr5	42799880	42812079	42799880	42812079	-	ENST00000514985.5@SELENOP	ENST00000514985.5	protein_coding	42811836,42808151,42806896,42804656,42799880	42812079,42808366,42807108,42804773,42801331	Gene ID= ENSG00000250722.5 TPM= 141.27 Transcript Type= protein_coding
chr5	43120918	43175734	43120918	43175734	+	ENST00000510026.5@ZNF131	ENST00000510026.5	protein_coding	43120918,43122039,43123209,43139165,43161249,43161709,43173318,43174447	43121123,43122177,43123310,43139309,43161613,43161931,43173448,43175734	Gene ID= ENSG00000172262.11 TPM= 1.06 Transcript Type= nonsense_mediated_decay
chr5	43121540	43175719	43121540	43175719	+	ENST00000306938.8@ZNF131	ENST00000306938.8	protein_coding	43121540,43122039,43123209,43139165,43161249,43161709,43173318,43174447	43121568,43122177,43123310,43139309,43161606,43161931,43173448,43175719	Gene ID= ENSG00000172262.11 TPM= 2.12 Transcript Type= protein_coding
chr5	43310636	43313468	43310636	43313468	-	transcript913.chr5.nnic@NA	transcript913.chr5.nnic	NA	43310636	43313468	Gene ID= novel_gene_chr5_914 TPM= 2.12 Transcript Type= NA
chr5	43444670	43483885	43444670	43483885	-	ENST00000397080.7@TMEM267	ENST00000397080.7	protein_coding	43483822,43453658,43444670	43483885,43454043,43446557	Gene ID= ENSG00000151881.14 TPM= 9.56 Transcript Type= protein_coding
chr5	43486701	43515145	43486701	43515145	-	ENST00000306862.6@C5orf34	ENST00000306862.6	protein_coding	43514806,43509145,43508577,43505748,43503665,43502372,43494510,43493543,43492720,43492215,43490631,43487909,43486701	43515145,43509375,43508666,43506394,43503760,43502495,43494601,43493612,43492890,43492309,43490729,43487949,43487111	Gene ID= ENSG00000172244.8 TPM= 2.12 Transcript Type= protein_coding
chr5	43527093	43557695	43527093	43557695	-	ENST00000338972.8@PAIP1	ENST00000338972.8	protein_coding	43557340,43555830,43547728,43543004,43538924,43536819,43535534,43534853,43533738,43529786,43527093	43557695,43555999,43547913,43543116,43539035,43536944,43535640,43534970,43533792,43529879,43527469	Gene ID= ENSG00000172239.13 TPM= 9.4 Transcript Type= protein_coding
chr5	43526267	43557079	43526267	43557079	-	ENST00000306846.7@PAIP1	ENST00000306846.7	protein_coding	43556582,43555830,43547728,43543004,43538924,43536819,43535534,43534853,43533738,43529786,43526267	43557079,43555999,43547913,43543116,43539035,43536944,43535640,43534970,43533792,43529879,43527469	Gene ID= ENSG00000172239.13 TPM= 1.67 Transcript Type= protein_coding
chr5	43527092	43557093	43527092	43557093	-	ENST00000436644.6@PAIP1	ENST00000436644.6	protein_coding	43556819,43555830,43547728,43543004,43538924,43536819,43535534,43534853,43533738,43529786,43527092	43557093,43555999,43547913,43543116,43539035,43536944,43535640,43534970,43533792,43529879,43527469	Gene ID= ENSG00000172239.13 TPM= 87.29 Transcript Type= protein_coding
chr5	43538214	43541197	43538214	43541197	+	transcript947.chr5.nnic@NA	transcript947.chr5.nnic	NA	43538214	43541197	Gene ID= novel_gene_chr5_948 TPM= 2.12 Transcript Type= NA
chr5	43571685	43575065	43571685	43575065	-	transcript995.chr5.nnic@NA	transcript995.chr5.nnic	NA	43571685	43575065	Gene ID= novel_gene_chr5_996 TPM= 4.25 Transcript Type= NA
chr5	43573168	43577031	43573168	43577031	-	transcript997.chr5.nnic@NA	transcript997.chr5.nnic	NA	43573168	43577031	Gene ID= novel_gene_chr5_998 TPM= 5.31 Transcript Type= NA
chr5	43600033	43603070	43600033	43603070	-	transcript1003.chr5.nnic@NA	transcript1003.chr5.nnic	NA	43600033	43603070	Gene ID= novel_gene_chr5_1004 TPM= 2.12 Transcript Type= NA
chr5	43602933	43653580	43602933	43653580	+	transcript972.chr5.nic@NNT	transcript972.chr5.nic	protein_coding	43602933,43609143,43612908,43615848,43619032,43624032,43628200,43644192,43644611,43645357,43649147,43650477,43651739,43653018	43603294,43609346,43613137,43616065,43619119,43624120,43628387,43644325,43644802,43645510,43649308,43650587,43651884,43653580	Gene ID= ENSG00000112992.16 TPM= 15.58 Transcript Type= NA
chr5	43602692	43616063	43602692	43616063	+	ENST00000505678.6@NNT	ENST00000505678.6	protein_coding	43602692,43609143,43612908,43615848	43602749,43609346,43613137,43616063	Gene ID= ENSG00000112992.16 TPM= 1.06 Transcript Type= protein_coding
chr5	43603127	43705232	43603127	43705232	+	ENST00000344920.8@NNT	ENST00000344920.8	protein_coding	43603127,43609143,43612908,43615848,43619032,43624032,43628200,43644192,43644611,43645357,43649147,43650477,43651739,43653018,43655840,43656653,43659171,43675511,43677725,43700119,43702621,43704255	43603294,43609346,43613137,43616065,43619119,43624120,43628387,43644325,43644802,43645510,43649308,43650587,43651884,43653213,43656073,43656813,43659350,43675670,43677806,43700237,43702736,43705232	Gene ID= ENSG00000112992.16 TPM= 70.1 Transcript Type= protein_coding
chr5	44777204	44808736	44777204	44808736	-	ENST00000505637.1@AC093297.2	ENST00000505637.1	antisense_RNA	44808642,44777204	44808736,44777328	Gene ID= ENSG00000251141.5 TPM= 1.06 Transcript Type= antisense_RNA
chr5	44808925	44815522	44808925	44815522	+	ENST00000507110.5@MRPS30	ENST00000507110.5	protein_coding	44808925,44811009,44811915,44813106,44814913	44809563,44811154,44812020,44813282,44815522	Gene ID= ENSG00000112996.10 TPM= 8.5 Transcript Type= protein_coding
chr5	44815785	44818559	44815785	44818559	+	transcript1022.chr5.nnic@NA	transcript1022.chr5.nnic	NA	44815785	44818559	Gene ID= novel_gene_chr5_1023 TPM= 8.5 Transcript Type= NA
chr5	52787940	52804046	52787940	52804046	+	ENST00000274311.2@PELO	ENST00000274311.2	protein_coding	52787940,52799885,52801409	52788414,52801120,52804046	Gene ID= ENSG00000152684.10 TPM= 4.25 Transcript Type= protein_coding
chr5	53098068	53109778	53098068	53109778	-	ENST00000450852.7@MOCS2	ENST00000450852.7	protein_coding	53109712,53108522,53107077,53102097,53101359,53100411,53098068	53109778,53108643,53107221,53102224,53101509,53100534,53098667	Gene ID= ENSG00000164172.18 TPM= 111 Transcript Type= protein_coding
chr5	53098062	53109759	53098062	53109759	-	ENST00000396954.7@MOCS2	ENST00000396954.7	protein_coding	53109251,53108522,53107077,53102097,53101359,53100411,53098062	53109759,53108643,53107221,53102224,53101509,53100534,53098667	Gene ID= ENSG00000164172.18 TPM= 11.15 Transcript Type= protein_coding
chr5	53109842	53115123	53109842	53115123	+	ENST00000502171.2@AC008966.1	ENST00000502171.2	antisense_RNA	53109842,53112240,53113859	53110148,53113034,53115123	Gene ID= ENSG00000247796.2 TPM= 1.06 Transcript Type= antisense_RNA
chr5	53109899	53115126	53109899	53115126	+	ENST00000499459.2@AC008966.1	ENST00000499459.2	antisense_RNA	53109899,53112240	53110148,53115126	Gene ID= ENSG00000247796.2 TPM= 2.12 Transcript Type= antisense_RNA
chr5	53480409	53487134	53480409	53487134	+	ENST00000256759.7@FST	ENST00000256759.7	protein_coding	53480409,53482880,53483504,53484069,53484997,53485951	53480876,53483071,53483722,53484293,53485227,53487134	Gene ID= ENSG00000134363.11 TPM= 2.12 Transcript Type= protein_coding
chr5	53560635	53683340	53560635	53683340	+	ENST00000296684.9@NDUFS4	ENST00000296684.9	protein_coding	53560635,53603452,53646233,53658551,53683118	53560760,53603530,53646405,53658624,53683340	Gene ID= ENSG00000164258.11 TPM= 62.67 Transcript Type= protein_coding
chr5	53560647	53683338	53560647	53683338	+	ENST00000506974.5@NDUFS4	ENST00000506974.5	protein_coding	53560647,53603452,53604724,53646233,53658551,53683118	53560760,53603530,53604895,53646405,53658624,53683338	Gene ID= ENSG00000164258.11 TPM= 9.56 Transcript Type= nonsense_mediated_decay
chr5	53973826	53978634	53973826	53978634	+	transcript1071.chr5.nnic@NA	transcript1071.chr5.nnic	NA	53973826	53978634	Gene ID= novel_gene_chr5_1072 TPM= 2.12 Transcript Type= NA
chr5	54455601	54456384	54455601	54456384	+	ENST00000302005.2@HSPB3	ENST00000302005.2	protein_coding	54455601	54456384	Gene ID= ENSG00000169271.2 TPM= 122.15 Transcript Type= protein_coding
chr5	54455698	54459145	54455698	54459145	+	transcript1075.chr5.nnic@NA	transcript1075.chr5.nnic	NA	54455698	54459145	Gene ID= novel_gene_chr5_1076 TPM= 8.5 Transcript Type= NA
chr5	54517731	54607427	54517731	54607427	+	transcript1078.chr5.nnic@SNX18	transcript1078.chr5.nnic	protein_coding	54517731,54606403	54519573,54607427	Gene ID= ENSG00000178996.13 TPM= 5.31 Transcript Type= NA
chr5	54544030	54545865	54544030	54545865	+	transcript1082.chr5.nnic@NA	transcript1082.chr5.nnic	NA	54544030	54545865	Gene ID= novel_gene_chr5_1083 TPM= 9.56 Transcript Type= NA
chr5	54977864	54985663	54977864	54985663	-	ENST00000381405.4@ESM1	ENST00000381405.4	protein_coding	54985217,54981997,54977864	54985663,54982146,54979435	Gene ID= ENSG00000164283.12 TPM= 1.06 Transcript Type= protein_coding
chr5	55160118	55164924	55160118	55164924	+	ENST00000503787.5@GPX8	ENST00000503787.5	protein_coding	55160118,55160994,55164055	55160396,55161255,55164924	Gene ID= ENSG00000164294.13 TPM= 4.25 Transcript Type= protein_coding
chr5	55231152	55233680	55231152	55233680	-	ENST00000282572.4@CCNO	ENST00000282572.4	protein_coding	55233143,55232361,55231152	55233680,55232546,55231860	Gene ID= ENSG00000152669.8 TPM= 1.06 Transcript Type= protein_coding
chr5	55256245	55307722	55256245	55307722	-	ENST00000251636.9@DHX29	ENST00000251636.9	protein_coding	55307387,55298591,55297285,55296220,55295379,55294017,55290218,55289270,55285696,55285293,55283203,55281372,55277106,55276266,55274866,55274614,55273293,55272087,55270578,55270412,55269413,55267686,55267138,55262630,55261368,55259848,55256245	55307722,55298664,55297398,55296349,55295524,55294145,55290344,55289428,55285861,55285416,55283811,55281515,55277282,55276406,55275010,55274731,55273377,55272175,55270706,55270487,55269637,55267822,55267231,55262932,55261499,55259944,55256540	Gene ID= ENSG00000067248.9 TPM= 15.93 Transcript Type= protein_coding
chr5	55307760	55425581	55307760	55425581	+	ENST00000230640.9@SKIV2L2	ENST00000230640.9	protein_coding	55307760,55322327,55324132,55327716,55328699,55340010,55341681,55343331,55344522,55345094,55347013,55349573,55350919,55353168,55358573,55366725,55378314,55379127,55387974,55397416,55400233,55405425,55410524,55414182,55415970,55422878,55424720	55308147,55322464,55324198,55327778,55328811,55340184,55341771,55343455,55344620,55345196,55347144,55349652,55351029,55353269,55358698,55366875,55378486,55379195,55388102,55397526,55400421,55405588,55410629,55414238,55416132,55422982,55425581	Gene ID= ENSG00000039123.15 TPM= 7.44 Transcript Type= protein_coding
chr5	55420606	55423598	55420606	55423598	-	transcript1129.chr5.nnic@NA	transcript1129.chr5.nnic	NA	55420606	55423598	Gene ID= novel_gene_chr5_1130 TPM= 2.12 Transcript Type= NA
chr5	55424854	55534964	55424854	55534964	-	transcript1121.chr5.nic@PLPP1	transcript1121.chr5.nic	protein_coding	55534572,55467869,55441851,55425863,55424854	55534964,55468149,55441908,55426039,55425334	Gene ID= ENSG00000067113.16 TPM= 12.75 Transcript Type= NA
chr5	55424854	55534969	55424854	55534969	-	ENST00000264775.9@PLPP1	ENST00000264775.9	protein_coding	55534572,55490960,55467869,55441851,55425863,55424854	55534969,55491114,55468149,55441908,55426039,55425334	Gene ID= ENSG00000067113.16 TPM= 100.91 Transcript Type= protein_coding
chr5	55424885	55535050	55424885	55535050	-	ENST00000307259.8@PLPP1	ENST00000307259.8	protein_coding	55534572,55475299,55467869,55441851,55425863,55424885	55535050,55475450,55468149,55441908,55426039,55425334	Gene ID= ENSG00000067113.16 TPM= 223.05 Transcript Type= protein_coding
chr5	55492324	55494980	55492324	55494980	+	transcript1125.chr5.nnic@NA	transcript1125.chr5.nnic	NA	55492324	55494980	Gene ID= novel_gene_chr5_1126 TPM= 18.06 Transcript Type= NA
chr5	55530813	55533395	55530813	55533395	+	transcript1127.chr5.nnic@NA	transcript1127.chr5.nnic	NA	55530813	55533395	Gene ID= novel_gene_chr5_1128 TPM= 3.19 Transcript Type= NA
chr5	55625845	55712726	55625845	55712726	-	ENST00000396865.6@SLC38A9	ENST00000396865.6	protein_coding	55712217,55711452,55697846,55672563,55669758,55669557,55669228,55664693,55656715,55652529,55649207,55645789,55635544,55633754,55627891,55625845	55712726,55711499,55697992,55672695,55669879,55669620,55669321,55664863,55656774,55652723,55649314,55645895,55635657,55633902,55627980,55626659	Gene ID= ENSG00000177058.11 TPM= 3.19 Transcript Type= protein_coding
chr5	56909260	56917235	56909260	56917235	+	ENST00000285947.4@SETD9	ENST00000285947.4	protein_coding	56909260,56911169,56913011,56913874,56914861,56916815	56909743,56911536,56913134,56913989,56914966,56917235	Gene ID= ENSG00000155542.11 TPM= 12.75 Transcript Type= protein_coding
chr5	56909615	56917348	56909615	56917348	+	ENST00000418299.5@SETD9	ENST00000418299.5	protein_coding	56909615,56913011,56913874,56914861,56916815	56909743,56913134,56913989,56914966,56917348	Gene ID= ENSG00000155542.11 TPM= 1.06 Transcript Type= nonsense_mediated_decay
chr5	56952201	56954234	56952201	56954234	+	transcript1152.chr5.nnic@NA	transcript1152.chr5.nnic	NA	56952201	56954234	Gene ID= novel_gene_chr5_1153 TPM= 2.12 Transcript Type= NA
chr5	57174070	57263082	57174070	57263082	+	transcript1163.chr5.nic@GPBP1	transcript1163.chr5.nic	protein_coding	57174070,57175448,57214074,57221376,57230846,57231098,57235966,57246300,57247075,57249409,57250954,57261180,57262594	57174211,57176400,57214193,57221396,57230969,57231321,57236032,57246484,57247215,57249576,57251141,57261282,57263082	Gene ID= ENSG00000062194.15 TPM= 5.31 Transcript Type= NA
chr5	57173829	57263587	57173829	57263587	+	transcript1167.chr5.nnic@GPBP1	transcript1167.chr5.nnic	protein_coding	57173829,57175448,57214074,57230846,57231098,57235966,57246300,57247075,57249409,57250954,57261180,57262594	57173926,57176400,57214193,57230969,57231321,57236032,57246484,57247215,57249576,57251141,57261282,57263587	Gene ID= ENSG00000062194.15 TPM= 6.37 Transcript Type= NA
chr5	57174117	57263082	57174117	57263082	+	ENST00000506184.6@GPBP1	ENST00000506184.6	protein_coding	57174117,57175448,57214074,57230846,57231098,57235966,57246300,57247075,57249409,57250954,57261180,57262594	57174211,57176400,57214193,57230969,57231321,57236032,57246484,57247215,57249576,57251141,57261282,57263082	Gene ID= ENSG00000062194.15 TPM= 16.99 Transcript Type= protein_coding
chr5	58453982	58460260	58453982	58460260	-	ENST00000274289.7@PLK2	ENST00000274289.7	protein_coding	58459690,58458985,58458725,58458399,58458084,58457488,58457181,58456945,58456492,58456026,58455539,58455285,58454911,58453982	58460260,58459092,58458841,58458528,58458171,58457583,58457379,58457092,58456589,58456155,58455779,58455414,58455021,58454774	Gene ID= ENSG00000145632.14 TPM= 166.23 Transcript Type= protein_coding
chr5	58970021	58972531	58970021	58972531	-	transcript1192.chr5.nnic@NA	transcript1192.chr5.nnic	NA	58970021	58972531	Gene ID= novel_gene_chr5_1193 TPM= 2.12 Transcript Type= NA
chr5	59124078	59126106	59124078	59126106	+	transcript1194.chr5.nnic@NA	transcript1194.chr5.nnic	NA	59124078	59126106	Gene ID= novel_gene_chr5_1195 TPM= 2.12 Transcript Type= NA
chr5	59154503	59157025	59154503	59157025	+	transcript1200.chr5.nnic@NA	transcript1200.chr5.nnic	NA	59154503	59157025	Gene ID= novel_gene_chr5_1201 TPM= 4.25 Transcript Type= NA
chr5	60890551	60945064	60890551	60945064	-	transcript1211.chr5.nic@ERCC8	transcript1211.chr5.nic	protein_coding	60944932,60928864,60922054,60918265,60904792,60903648,60902442,60899627,60898276,60890551	60945064,60928959,60922155,60918388,60904873,60903716,60902508,60899727,60898400,60891086	Gene ID= ENSG00000049167.13 TPM= 2.12 Transcript Type= NA
chr5	60873832	60945051	60873832	60945051	-	ENST00000265038.9@ERCC8	ENST00000265038.9	protein_coding	60944932,60928864,60922054,60918265,60904792,60903648,60902442,60899627,60898276,60890889,60887440,60873832	60945051,60928959,60922155,60918388,60904873,60903716,60902508,60899727,60898400,60891086,60887520,60874683	Gene ID= ENSG00000049167.13 TPM= 3.19 Transcript Type= protein_coding
chr5	60945129	61153037	60945129	61153037	+	ENST00000296597.9@NDUFAF2	ENST00000296597.9	protein_coding	60945129,61073125,61098992,61152704	60945382,61073214,61099032,61153037	Gene ID= ENSG00000164182.10 TPM= 38.77 Transcript Type= protein_coding
chr5	60945207	61153026	60945207	61153026	+	ENST00000511107.1@NDUFAF2	ENST00000511107.1	protein_coding	60945207,61098992,61152704	60945428,61099032,61153026	Gene ID= ENSG00000164182.10 TPM= 3.19 Transcript Type= protein_coding
chr5	60945335	61153026	60945335	61153026	+	ENST00000502658.1@NDUFAF2	ENST00000502658.1	protein_coding	60945335,61073125,61152704	60945382,61073214,61153026	Gene ID= ENSG00000164182.10 TPM= 1.59 Transcript Type= protein_coding
chr5	61157709	61162474	61157709	61162474	-	ENST00000339020.7@SMIM15	ENST00000339020.7	protein_coding	61162217,61161088,61157709	61162474,61161227,61160199	Gene ID= ENSG00000188725.7 TPM= 3.19 Transcript Type= protein_coding
chr5	62306162	62385676	62306162	62385676	+	ENST00000401507.7@KIF2A	ENST00000401507.7	protein_coding	62306162,62347130,62348048,62350066,62352588,62353275,62355159,62357691,62358137,62361242,62361466,62362450,62363178,62363695,62365243,62366414,62373687,62377661,62381118,62385484	62306536,62347224,62348167,62350120,62352710,62353375,62355254,62357745,62358299,62361332,62361529,62362541,62363320,62363899,62365353,62366481,62373837,62377762,62381253,62385676	Gene ID= ENSG00000068796.16 TPM= 1.06 Transcript Type= protein_coding
chr5	62578821	62628582	62578821	62628582	+	ENST00000409534.1@IPO11	ENST00000409534.1	protein_coding	62578821,62591577,62601764,62627154	62578935,62591672,62601848,62628582	Gene ID= ENSG00000086200.16 TPM= 5.31 Transcript Type= protein_coding
chr5	62412767	62628577	62412767	62628577	+	ENST00000325324.10@IPO11	ENST00000325324.10	protein_coding	62412767,62437274,62442983,62449927,62451730,62467131,62470250,62474416,62476683,62483101,62484010,62485419,62487771,62489302,62490115,62493998,62504667,62504858,62506241,62515388,62526142,62530709,62536702,62537209,62550367,62551223,62561136,62591577,62601764,62627154	62412929,62437417,62443083,62449999,62451933,62467263,62470308,62474464,62476753,62483293,62484162,62485462,62487861,62489349,62490220,62494124,62504700,62504898,62506357,62515501,62526257,62530785,62536781,62537289,62550462,62551336,62561257,62591672,62601848,62628577	Gene ID= ENSG00000086200.16 TPM= 11.68 Transcript Type= protein_coding
chr5	62578735	62581448	62578735	62581448	+	ENST00000334994.5@LRRC70	ENST00000334994.5	protein_coding	62578735,62579401	62578935,62581448	Gene ID= ENSG00000186105.7 TPM= 2.12 Transcript Type= protein_coding
chr5	64718144	64768685	64718144	64768685	-	ENST00000513458.8@SREK1IP1	ENST00000513458.8	protein_coding	64768505,64754315,64741057,64728107,64718144	64768685,64754362,64741200,64728179,64724573	Gene ID= ENSG00000153006.15 TPM= 2.12 Transcript Type= protein_coding
chr5	64768930	65018763	64768930	65018763	+	ENST00000381070.7@CWC27	ENST00000381070.7	protein_coding	64768930,64774691,64781921,64783836,64785481,64786524,64788951,64800248,64801302,64804229,64885443,64971703,64977135,65018159	64769188,64774787,64782033,64783979,64785579,64786627,64789020,64800327,64801332,64804386,64885546,64971812,64977238,65018763	Gene ID= ENSG00000153015.15 TPM= 10.62 Transcript Type= protein_coding
chr5	64768946	64808562	64768946	64808562	+	ENST00000508024.1@CWC27	ENST00000508024.1	protein_coding	64768946,64774691,64781921,64783836,64785481,64786524,64788951,64800248,64801302,64804229,64807599	64769188,64774787,64782033,64783979,64785579,64786627,64789020,64800327,64801332,64804386,64808562	Gene ID= ENSG00000153015.15 TPM= 3.19 Transcript Type= protein_coding
chr5	65563239	65587549	65563239	65587549	+	ENST00000261308.9@PPWD1	ENST00000261308.9	protein_coding	65563239,65567513,65569632,65569878,65571839,65576879,65579424,65583038,65585014,65585999,65587253	65563506,65567615,65569732,65569998,65572286,65577069,65579613,65583219,65585095,65586181,65587549	Gene ID= ENSG00000113593.11 TPM= 24.96 Transcript Type= protein_coding
chr5	65563273	65587549	65563273	65587549	+	transcript1273.chr5.nic@PPWD1	transcript1273.chr5.nic	protein_coding	65563273,65567513,65569878,65571839,65576879,65579424,65583038,65585014,65585999,65587253	65563506,65569732,65569998,65572286,65577069,65579613,65583219,65585095,65586181,65587549	Gene ID= ENSG00000113593.11 TPM= 7.97 Transcript Type= NA
chr5	65563236	65568079	65563236	65568079	+	ENST00000508982.1@PPWD1	ENST00000508982.1	protein_coding	65563236,65567513	65563506,65568079	Gene ID= ENSG00000113593.11 TPM= 1.06 Transcript Type= retained_intron
chr5	65624716	65666233	65624716	65666233	+	ENST00000399438.7@TRAPPC13	ENST00000399438.7	protein_coding	65624716,65635301,65635944,65637696,65647055,65650810,65652501,65655636,65658368,65660699,65662050,65664237,65664504	65625106,65635369,65636043,65637780,65647182,65650882,65652545,65655653,65658501,65660897,65662150,65664384,65666233	Gene ID= ENSG00000113597.17 TPM= 4.25 Transcript Type= protein_coding
chr5	65625034	65664764	65625034	65664764	+	ENST00000438419.6@TRAPPC13	ENST00000438419.6	protein_coding	65625034,65635301,65635944,65637696,65647055,65650810,65652501,65655636,65658368,65660699,65662050,65664234,65664504	65625106,65635369,65636043,65637780,65647182,65650882,65652545,65655653,65658501,65660897,65662150,65664384,65664764	Gene ID= ENSG00000113597.17 TPM= 1.06 Transcript Type= protein_coding
chr5	65625040	65666069	65625040	65666069	+	ENST00000231526.8@TRAPPC13	ENST00000231526.8	protein_coding	65625040,65635301,65635944,65637696,65647055,65650810,65652501,65658368,65660699,65662050,65664237,65664504	65625106,65635369,65636043,65637780,65647182,65650882,65652545,65658501,65660897,65662150,65664384,65666069	Gene ID= ENSG00000113597.17 TPM= 2.12 Transcript Type= protein_coding
chr5	65624765	65630891	65624765	65630891	+	ENST00000510585.2@AC008560.1	ENST00000510585.2	protein_coding	65624765,65629468	65625106,65630891	Gene ID= ENSG00000253251.2 TPM= 3.19 Transcript Type= protein_coding
chr5	65722196	65829283	65722196	65829283	+	ENST00000380985.9@NLN	ENST00000380985.9	protein_coding	65722196,65758567,65762960,65777427,65780179,65781261,65785775,65788118,65792454,65809515,65810037,65812255,65822781	65722414,65758826,65763108,65777534,65780281,65781421,65785910,65788484,65792655,65809701,65810165,65812391,65829283	Gene ID= ENSG00000123213.22 TPM= 3.19 Transcript Type= protein_coding
chr5	65925775	66046385	65925775	66046385	+	transcript1302.chr5.nic@ERBIN	transcript1302.chr5.nic	protein_coding	65925775,65988635,65992710,65994747,66012049,66013549,66014669,66021322,66023290,66024306,66025480,66025848,66026302,66028274,66038383,66043077,66044137,66046353	65926806,65988682,65992907,65994864,66012127,66013638,66014725,66021385,66023364,66024450,66025552,66025977,66026417,66028343,66038482,66043198,66044310,66046385	Gene ID= ENSG00000112851.14 TPM= 11.68 Transcript Type= NA
chr5	66144193	66175041	66144193	66175041	+	transcript1311.chr5.nic@SREK1	transcript1311.chr5.nic	protein_coding	66144193,66153463,66158809,66159219,66162109,66162414,66163792,66164783,66170051,66170585,66174946	66144537,66153596,66158932,66159334,66162273,66162592,66163922,66164897,66170170,66170947,66175041	Gene ID= ENSG00000153914.15 TPM= 4.25 Transcript Type= NA
chr5	66144193	66175041	66144193	66175041	+	transcript1316.chr5.nic@SREK1	transcript1316.chr5.nic	protein_coding	66144193,66153463,66159219,66162109,66162414,66163792,66164783,66170051,66170585,66174946	66144537,66153596,66159334,66162273,66162592,66163922,66164897,66170170,66170947,66175041	Gene ID= ENSG00000153914.15 TPM= 10.62 Transcript Type= NA
chr5	66158112	66164299	66158112	66164299	+	transcript1323.chr5.nic@SREK1	transcript1323.chr5.nic	protein_coding	66158112,66162109,66162414	66159334,66162273,66164299	Gene ID= ENSG00000153914.15 TPM= 6.37 Transcript Type= NA
chr5	66181910	66182489	66181910	66182489	+	transcript1325.chr5.nnic@NA	transcript1325.chr5.nnic	NA	66181910	66182489	Gene ID= novel_gene_chr5_1326 TPM= 2.12 Transcript Type= NA
chr5	66334973	66338648	66334973	66338648	+	transcript1328.chr5.nnic@NA	transcript1328.chr5.nnic	NA	66334973	66338648	Gene ID= novel_gene_chr5_1329 TPM= 5.31 Transcript Type= NA
chr5	66378736	66382442	66378736	66382442	+	transcript1346.chr5.nnic@NA	transcript1346.chr5.nnic	NA	66378736	66382442	Gene ID= novel_gene_chr5_1347 TPM= 65.85 Transcript Type= NA
chr5	66399240	66401797	66399240	66401797	-	transcript1356.chr5.nnic@NA	transcript1356.chr5.nnic	NA	66399240	66401797	Gene ID= novel_gene_chr5_1357 TPM= 2.12 Transcript Type= NA
chr5	66402423	66403855	66402423	66403855	-	transcript1362.chr5.nnic@NA	transcript1362.chr5.nnic	NA	66402423	66403855	Gene ID= novel_gene_chr5_1363 TPM= 2.12 Transcript Type= NA
chr5	66404257	66407404	66404257	66407404	-	transcript1358.chr5.nnic@NA	transcript1358.chr5.nnic	NA	66404257	66407404	Gene ID= novel_gene_chr5_1359 TPM= 6.37 Transcript Type= NA
chr5	66419825	66422300	66419825	66422300	-	transcript1360.chr5.nnic@NA	transcript1360.chr5.nnic	NA	66419825	66422300	Gene ID= novel_gene_chr5_1361 TPM= 3.19 Transcript Type= NA
chr5	66430408	66434835	66430408	66434835	-	transcript1366.chr5.nnic@NA	transcript1366.chr5.nnic	NA	66430408	66434835	Gene ID= novel_gene_chr5_1367 TPM= 2.12 Transcript Type= NA
chr5	66434286	66439288	66434286	66439288	+	transcript1350.chr5.nnic@NA	transcript1350.chr5.nnic	NA	66434286	66439288	Gene ID= novel_gene_chr5_1351 TPM= 14.87 Transcript Type= NA
chr5	66439057	66440450	66439057	66440450	-	transcript1354.chr5.nnic@NA	transcript1354.chr5.nnic	NA	66439057	66440450	Gene ID= novel_gene_chr5_1355 TPM= 14.87 Transcript Type= NA
chr5	66596347	67149524	66596347	67149524	+	transcript1370.chr5.nic@MAST4	transcript1370.chr5.nic	protein_coding	66596347,66759709,66788670,66899951,67054404,67090162,67095597,67100435,67102536,67104366,67110098,67114087,67118682,67121017,67130210,67131813,67133514,67134523,67136563,67142115,67142421,67144669,67145144,67149389	66597018,66759862,66788794,66899982,67054492,67090231,67095675,67100592,67102611,67104575,67110199,67114219,67118749,67121102,67130418,67131951,67133646,67134688,67136664,67142237,67142533,67144796,67145379,67149524	Gene ID= ENSG00000069020.18 TPM= 4.46 Transcript Type= NA
chr5	67004620	67167051	67004620	67167051	+	ENST00000261569.11@MAST4	ENST00000261569.11	protein_coding	67004620,67054404,67090162,67095597,67100435,67102536,67104366,67110098,67114087,67118682,67121017,67130210,67131813,67133514,67134523,67136563,67142115,67142421,67144669,67145144,67149389,67152637,67153458,67160456,67162607,67163147	67005085,67054492,67090231,67095675,67100592,67102611,67104575,67110199,67114219,67118749,67121102,67130418,67131951,67133646,67134688,67136664,67142237,67142533,67144796,67145379,67149589,67152866,67153580,67160592,67162788,67167051	Gene ID= ENSG00000069020.18 TPM= 23.37 Transcript Type= protein_coding
chr5	66596347	66918791	66596347	66918791	+	transcript1380.chr5.nnic@MAST4	transcript1380.chr5.nnic	protein_coding	66596347,66759709,66788670,66899951,66916983,66917614	66597018,66759862,66788794,66899982,66917018,66918791	Gene ID= ENSG00000069020.18 TPM= 2.34 Transcript Type= NA
chr5	66596347	66930961	66596347	66930961	+	transcript1386.chr5.nic@MAST4	transcript1386.chr5.nic	protein_coding	66596347,66759709,66788670,66899951,66930747	66597018,66759862,66788794,66899982,66930961	Gene ID= ENSG00000069020.18 TPM= 7.65 Transcript Type= NA
chr5	66596347	67057605	66596347	67057605	+	transcript1390.chr5.nic@MAST4	transcript1390.chr5.nic	protein_coding	66596347,66759709,66788670,66899951,67054404	66597018,66759862,66788794,66899982,67057605	Gene ID= ENSG00000069020.18 TPM= 3.4 Transcript Type= NA
chr5	66596347	66905328	66596347	66905328	+	transcript1392.chr5.nic@MAST4	transcript1392.chr5.nic	protein_coding	66596347,66759709,66788670,66899951	66597018,66759862,66788794,66905328	Gene ID= ENSG00000069020.18 TPM= 3.4 Transcript Type= NA
chr5	66958897	66986523	66958897	66986523	+	ENST00000407621.1@MAST4	ENST00000407621.1	protein_coding	66958897,66963707,66986444	66959294,66963787,66986523	Gene ID= ENSG00000069020.18 TPM= 1.06 Transcript Type= protein_coding
chr5	66828862	66986523	66828862	66986523	+	ENST00000450827.5@MAST4	ENST00000450827.5	protein_coding	66828862,66899951,66916983,66963707,66964040,66986444	66828882,66899982,66917018,66963787,66964061,66986523	Gene ID= ENSG00000069020.18 TPM= 1.06 Transcript Type= protein_coding
chr5	66947144	66947675	66947144	66947675	-	transcript1405.chr5.nnic@NA	transcript1405.chr5.nnic	NA	66947144	66947675	Gene ID= novel_gene_chr5_1406 TPM= 2.12 Transcript Type= NA
chr5	67062373	67064528	67062373	67064528	-	transcript1403.chr5.nnic@NA	transcript1403.chr5.nnic	NA	67062373	67064528	Gene ID= novel_gene_chr5_1404 TPM= 4.25 Transcript Type= NA
chr5	67157416	67159968	67157416	67159968	+	transcript1399.chr5.nnic@NA	transcript1399.chr5.nnic	NA	67157416	67159968	Gene ID= novel_gene_chr5_1400 TPM= 3.19 Transcript Type= NA
chr5	67167165	67168889	67167165	67168889	+	transcript1401.chr5.nnic@NA	transcript1401.chr5.nnic	NA	67167165	67168889	Gene ID= novel_gene_chr5_1402 TPM= 4.25 Transcript Type= NA
chr5	68215310	68294658	68215310	68294658	+	transcript1417.chr5.nic@PIK3R1	transcript1417.chr5.nic	protein_coding	68215310,68226290,68273390,68273939,68279602,68280528,68280927,68292259,68293101,68293303,68293709,68294536	68215949,68227009,68273482,68274013,68279733,68280729,68281006,68292361,68293199,68293483,68293834,68294658	Gene ID= ENSG00000145675.14 TPM= 10.97 Transcript Type= NA
chr5	68290637	68298583	68290637	68298583	+	ENST00000336483.9@PIK3R1	ENST00000336483.9	protein_coding	68290637,68292259,68293101,68293303,68293709,68294536,68295148,68295420,68296171,68297412	68290834,68292361,68293199,68293483,68293834,68294678,68295324,68295488,68296341,68298583	Gene ID= ENSG00000145675.14 TPM= 4.25 Transcript Type= protein_coding
chr5	68292568	68298756	68292568	68298756	+	ENST00000523872.1@PIK3R1	ENST00000523872.1	protein_coding	68292568,68293101,68293303,68293709,68294536,68295148,68295420,68296171,68297412	68292729,68293199,68293483,68293834,68294678,68295324,68295488,68296341,68298756	Gene ID= ENSG00000145675.14 TPM= 3.19 Transcript Type= protein_coding
chr5	68215776	68298753	68215776	68298753	+	ENST00000521657.5@PIK3R1	ENST00000521657.5	protein_coding	68215776,68226290,68273390,68273939,68279602,68280528,68280927,68292259,68293101,68293303,68293709,68294536,68295148,68295420,68296171,68297412	68215953,68227009,68273482,68274013,68279733,68280729,68281006,68292361,68293199,68293483,68293834,68294678,68295324,68295488,68296341,68298753	Gene ID= ENSG00000145675.14 TPM= 53.46 Transcript Type= protein_coding
chr5	68252391	68256195	68252391	68256195	+	transcript1426.chr5.nnic@NA	transcript1426.chr5.nnic	NA	68252391	68256195	Gene ID= novel_gene_chr5_1427 TPM= 2.12 Transcript Type= NA
chr5	68253985	68258864	68253985	68258864	-	transcript1432.chr5.nnic@NA	transcript1432.chr5.nnic	NA	68253985	68258864	Gene ID= novel_gene_chr5_1433 TPM= 2.12 Transcript Type= NA
chr5	68298918	68301534	68298918	68301534	+	transcript1430.chr5.nnic@NA	transcript1430.chr5.nnic	NA	68298918	68301534	Gene ID= novel_gene_chr5_1431 TPM= 3.19 Transcript Type= NA
chr5	69093646	69131069	69093646	69131069	+	ENST00000396591.7@SLC30A5	ENST00000396591.7	protein_coding	69093646,69100807,69103062,69104631,69108349,69113140,69114420,69115237,69115926,69116394,69117239,69118499,69121694,69123199,69128004,69129447	69094338,69100929,69103128,69104716,69108436,69113227,69114496,69115407,69116214,69116602,69117396,69118628,69121895,69123425,69128132,69131069	Gene ID= ENSG00000145740.18 TPM= 11.15 Transcript Type= protein_coding
chr5	69093981	69131069	69093981	69131069	+	transcript1444.chr5.nic@SLC30A5	transcript1444.chr5.nic	protein_coding	69093981,69103062,69104631,69108349,69113140,69114420,69115237,69115926,69116394,69117239,69118499,69121694,69123199,69128004,69129447	69094338,69103128,69104716,69108436,69113227,69114496,69115407,69116214,69116602,69117396,69118628,69121895,69123425,69128132,69131069	Gene ID= ENSG00000145740.18 TPM= 2.66 Transcript Type= NA
chr5	69093991	69104740	69093991	69104740	+	ENST00000380860.8@SLC30A5	ENST00000380860.8	protein_coding	69093991,69100807,69103062,69103962	69094338,69100929,69103128,69104740	Gene ID= ENSG00000145740.18 TPM= 21.24 Transcript Type= protein_coding
chr5	69189548	69210357	69189548	69210357	+	ENST00000283006.6@CENPH	ENST00000283006.6	protein_coding	69189548,69191795,69194647,69195717,69197053,69202506,69202919,69208196,69209707	69189768,69191850,69194695,69195791,69197109,69202569,69202970,69208359,69210357	Gene ID= ENSG00000153044.9 TPM= 10.62 Transcript Type= protein_coding
chr5	69217760	69230129	69217760	69230129	+	ENST00000256441.4@MRPS36	ENST00000256441.4	protein_coding	69217760,69226338,69228200,69229208	69217871,69226401,69228387,69230129	Gene ID= ENSG00000134056.11 TPM= 22.31 Transcript Type= protein_coding
chr5	69234873	69277430	69234873	69277430	+	ENST00000256443.7@CDK7	ENST00000256443.7	protein_coding	69234873,69235394,69252418,69254602,69255460,69258043,69259818,69262205,69269207,69272892,69276543,69277107	69235041,69235453,69252451,69254669,69255528,69258153,69259936,69262304,69269293,69273041,69276690,69277430	Gene ID= ENSG00000134058.11 TPM= 1.06 Transcript Type= protein_coding
chr5	69364743	69369245	69364743	69369245	-	transcript1488.chr5.nnic@TAF9	transcript1488.chr5.nnic	protein_coding	69368977,69366503,69364743	69369245,69366595,69365754	Gene ID= ENSG00000273841.4 TPM= 9.38 Transcript Type= NA
chr5	69364745	69369642	69364745	69369642	-	ENST00000217893.9@TAF9	ENST00000217893.9	protein_coding	69369463,69366503,69364745	69369642,69366595,69365754	Gene ID= ENSG00000273841.4 TPM= 91.7 Transcript Type= protein_coding
chr5	69364744	69370013	69364744	69370013	-	ENST00000328663.8@TAF9	ENST00000328663.8	protein_coding	69369657,69366503,69364744	69370013,69366595,69365754	Gene ID= ENSG00000273841.4 TPM= 3.01 Transcript Type= protein_coding
chr5	69369812	69414801	69369812	69414801	+	ENST00000354868.9@RAD17	ENST00000354868.9	protein_coding	69369812,69371035,69371454,69372034,69373830,69374628,69381901,69384797,69386043,69386180,69386396,69389034,69391831,69393155,69393354,69396397,69400049,69410493,69414031	69369933,69371171,69371557,69372217,69374087,69374711,69382057,69384933,69386095,69386305,69386465,69389145,69392013,69393240,69393500,69396546,69400169,69410550,69414801	Gene ID= ENSG00000152942.18 TPM= 4.96 Transcript Type= protein_coding
chr5	69369825	69414801	69369825	69414801	+	ENST00000354312.7@RAD17	ENST00000354312.7	protein_coding	69369825,69371035,69372034,69373830,69374628,69381901,69384797,69386043,69386180,69386396,69389034,69391831,69393155,69393354,69396397,69400049,69410493,69414031	69369933,69371171,69372217,69374087,69374711,69382057,69384933,69386095,69386305,69386465,69389145,69392013,69393240,69393500,69396546,69400169,69410550,69414801	Gene ID= ENSG00000152942.18 TPM= 10.27 Transcript Type= protein_coding
chr5	69370060	69414799	69370060	69414799	+	ENST00000616683.4@RAD17	ENST00000616683.4	protein_coding	69370060,69371035,69372034,69373830,69374628,69381901,69384797,69386043,69386180,69386396,69389034,69391831,69393155,69393354,69396397,69400049,69410493,69414031	69370284,69371171,69372217,69374087,69374711,69382057,69384933,69386095,69386305,69386465,69389145,69392013,69393240,69393500,69396546,69400169,69410550,69414799	Gene ID= ENSG00000152942.18 TPM= 1.77 Transcript Type= protein_coding
chr5	70025247	70032696	70025247	70032696	+	ENST00000380751.9@SERF1B	ENST00000380751.9	protein_coding	70025247,70026407,70032315	70025458,70026515,70032696	Gene ID= ENSG00000205572.9 TPM= 37.18 Transcript Type= protein_coding
chr5	70900665	70908375	70900665	70908375	+	ENST00000317633.13@SERF1A	ENST00000317633.13	protein_coding	70900665,70901825,70907734	70900876,70901933,70908375	Gene ID= ENSG00000172058.15 TPM= 10.09 Transcript Type= protein_coding
chr5	70900978	70908115	70900978	70908115	+	ENST00000507348.5@SERF1A	ENST00000507348.5	protein_coding	70900978,70901825,70907734	70901149,70901933,70908115	Gene ID= ENSG00000172058.15 TPM= 3.72 Transcript Type= protein_coding
chr5	70925030	70953012	70925030	70953012	+	ENST00000380707.8@SMN1	ENST00000380707.8	protein_coding	70925030,70938839,70941389,70942358,70942718,70944658,70946066,70951941,70952439	70925184,70938910,70941508,70942558,70942870,70944753,70946176,70951994,70953012	Gene ID= ENSG00000172062.16 TPM= 11.68 Transcript Type= protein_coding
chr5	71035329	71067688	71035329	71067688	-	transcript1514.chr5.nic@GTF2H2	transcript1514.chr5.nic	protein_coding	71067655,71062708,71061688,71061272,71060844,71060120,71059690,71055352,71049068,71048762,71048006,71045444,71042181,71041522,71037507,71035329	71067688,71062796,71061765,71061308,71060930,71060170,71059744,71055457,71049158,71048849,71048113,71045507,71042284,71041624,71037546,71035796	Gene ID= ENSG00000145736.14 TPM= 4.25 Transcript Type= NA
chr5	71055030	71067688	71055030	71067688	-	transcript1518.chr5.nnic@GTF2H2	transcript1518.chr5.nnic	protein_coding	71067655,71065125,71062708,71061688,71061272,71060844,71060120,71059690,71055030	71067688,71065222,71062796,71061765,71061308,71060930,71060170,71059744,71055457	Gene ID= ENSG00000145736.14 TPM= 3.19 Transcript Type= NA
chr5	71055030	71067674	71055030	71067674	-	transcript1520.chr5.nic@GTF2H2	transcript1520.chr5.nic	protein_coding	71067494,71062708,71061688,71061272,71060844,71060120,71059690,71055030	71067674,71062796,71061765,71061308,71060930,71060170,71059744,71055457	Gene ID= ENSG00000145736.14 TPM= 3.19 Transcript Type= NA
chr5	71455615	71567820	71455615	71567820	+	ENST00000358731.8@BDP1	ENST00000358731.8	protein_coding	71455615,71458579,71461817,71464058,71466096,71467354,71470395,71483842,71486484,71489404,71490984,71495250,71497270,71501562,71502599,71504621,71509465,71512241,71513185,71514944,71516061,71517322,71522289,71522756,71523939,71532308,71539042,71539557,71541454,71542105,71544357,71545039,71548682,71549420,71553116,71556886,71559982,71562274,71564754	71456089,71458855,71461926,71464117,71466221,71467487,71470489,71483896,71486627,71489682,71491131,71495408,71497426,71501653,71502791,71504751,71511151,71512428,71513407,71515122,71516271,71517452,71522490,71522949,71524323,71532427,71539078,71539649,71541682,71542265,71544507,71545219,71548745,71549606,71553320,71556925,71560237,71562520,71567820	Gene ID= ENSG00000145734.18 TPM= 14.87 Transcript Type= protein_coding
chr5	71587262	71658704	71587262	71658704	+	transcript1542.chr5.nic@MCCC2	transcript1542.chr5.nic	protein_coding	71587262,71592926,71596280,71599659,71602506,71604356,71632121,71634943,71635151,71641003,71643819,71646211,71649097,71650069,71652669,71656743	71587554,71592992,71596364,71599760,71602633,71604468,71632185,71635042,71635246,71641075,71643895,71646277,71649253,71650183,71652754,71658704	Gene ID= ENSG00000131844.15 TPM= 10.62 Transcript Type= NA
chr5	71631341	71658704	71631341	71658704	+	transcript1546.chr5.nnic@MCCC2	transcript1546.chr5.nnic	protein_coding	71631341,71632121,71634943,71635151,71641003,71643819,71646211,71649097,71650069,71652669,71656743	71631398,71632185,71635042,71635246,71641075,71643895,71646277,71649253,71650183,71652754,71658704	Gene ID= ENSG00000131844.15 TPM= 2.12 Transcript Type= NA
chr5	71587262	71641368	71587262	71641368	+	transcript1547.chr5.nic@MCCC2	transcript1547.chr5.nic	protein_coding	71587262,71592926,71596280,71599659,71602506,71604356,71632121,71634943,71635151,71641003	71587554,71592992,71596364,71599760,71602633,71604468,71632185,71635042,71635246,71641368	Gene ID= ENSG00000131844.15 TPM= 4.25 Transcript Type= NA
chr5	71587297	71658704	71587297	71658704	+	ENST00000340941.10@MCCC2	ENST00000340941.10	protein_coding	71587297,71592926,71596280,71599659,71602506,71604356,71626640,71632121,71634943,71635151,71641003,71643819,71646211,71649097,71650069,71652669,71656743	71587554,71592992,71596364,71599760,71602633,71604468,71626753,71632185,71635042,71635246,71641075,71643895,71646277,71649253,71650183,71652754,71658704	Gene ID= ENSG00000131844.15 TPM= 52.05 Transcript Type= protein_coding
chr5	71587330	71641121	71587330	71641121	+	ENST00000509358.6@MCCC2	ENST00000509358.6	protein_coding	71587330,71592926,71596280,71599659,71602506,71604356,71626640,71632121,71634943,71635151,71641003	71587554,71592992,71596364,71599760,71602633,71604468,71626753,71632185,71635042,71635246,71641121	Gene ID= ENSG00000131844.15 TPM= 1.06 Transcript Type= protein_coding
chr5	71633133	71634267	71633133	71634267	-	transcript1548.chr5.nnic@NA	transcript1548.chr5.nnic	NA	71633133	71634267	Gene ID= novel_gene_chr5_1549 TPM= 4.25 Transcript Type= NA
chr5	72107160	72195523	72107160	72195523	+	transcript1554.chr5.nic@MAP1B	transcript1554.chr5.nic	protein_coding	72107160,72115698,72183743,72186614,72193866	72107715,72115799,72183825,72186754,72195523	Gene ID= ENSG00000131711.14 TPM= 127.81 Transcript Type= NA
chr5	72107234	72209570	72107234	72209570	+	ENST00000296755.11@MAP1B	ENST00000296755.11	protein_coding	72107234,72115698,72183743,72186614,72193866,72203563,72205084	72107715,72115799,72183825,72186754,72200367,72203801,72209570	Gene ID= ENSG00000131711.14 TPM= 262.35 Transcript Type= protein_coding
chr5	72122643	72128615	72122643	72128615	-	transcript1561.chr5.nnic@NA	transcript1561.chr5.nnic	NA	72122643	72128615	Gene ID= novel_gene_chr5_1562 TPM= 2.12 Transcript Type= NA
chr5	72219409	72320261	72219409	72320261	-	ENST00000261413.9@MRPS27	ENST00000261413.9	protein_coding	72320149,72314081,72297632,72295531,72238014,72234119,72232443,72228266,72226057,72223683,72219409	72320261,72314158,72297702,72295589,72238128,72234197,72232558,72228368,72226199,72223850,72221148	Gene ID= ENSG00000113048.16 TPM= 114.71 Transcript Type= protein_coding
chr5	72219528	72320255	72219528	72320255	-	ENST00000457646.8@MRPS27	ENST00000457646.8	protein_coding	72320181,72314081,72297632,72295531,72238014,72234119,72232443,72228266,72226057,72223683,72219528	72320255,72314158,72297702,72295589,72238128,72234197,72232558,72228368,72226199,72223850,72221148	Gene ID= ENSG00000113048.16 TPM= 4.25 Transcript Type= protein_coding
chr5	72320367	72368395	72320367	72368395	+	ENST00000380639.9@PTCD2	ENST00000380639.9	protein_coding	72320367,72322172,72326612,72331258,72335018,72335794,72338622,72342962,72352641,72358203	72320509,72322264,72326741,72331375,72335096,72335885,72338735,72343036,72352754,72368395	Gene ID= ENSG00000049883.14 TPM= 21.24 Transcript Type= protein_coding
chr5	72320366	72359230	72320366	72359230	+	transcript1578.chr5.nnic@PTCD2	transcript1578.chr5.nnic	protein_coding	72320366,72322172,72326612,72331258,72335018,72335794,72338622,72342962,72358203	72320509,72322264,72326741,72331375,72335096,72335885,72338735,72343036,72359230	Gene ID= ENSG00000049883.14 TPM= 3.19 Transcript Type= NA
chr5	72442652	72507727	72442652	72507727	-	ENST00000318442.5@ZNF366	ENST00000318442.5	protein_coding	72507251,72460165,72456404,72447243,72442652	72507727,72461510,72456595,72447417,72444291	Gene ID= ENSG00000178175.11 TPM= 4.25 Transcript Type= protein_coding
chr5	72816014	72817239	72816014	72817239	-	transcript1598.chr5.nnic@NA	transcript1598.chr5.nnic	NA	72816014	72817239	Gene ID= novel_gene_chr5_1599 TPM= 2.12 Transcript Type= NA
chr5	72816312	72916733	72816312	72916733	+	ENST00000337273.9@TNPO1	ENST00000337273.9	protein_coding	72816312,72848385,72851244,72855774,72861808,72865596,72872639,72875615,72877228,72882467,72883064,72887070,72888078,72889786,72891810,72893139,72893377,72893616,72896458,72897056,72900006,72900974,72903709,72905303,72908709	72816752,72848498,72851319,72855923,72861914,72865729,72872720,72875737,72877346,72882527,72883232,72887222,72888303,72889957,72891896,72893246,72893535,72893703,72896556,72897151,72900081,72901073,72903783,72905445,72916733	Gene ID= ENSG00000083312.17 TPM= 3.19 Transcript Type= protein_coding
chr5	72816620	72905580	72816620	72905580	+	transcript1590.chr5.nic@TNPO1	transcript1590.chr5.nic	protein_coding	72816620,72848385,72851244,72855774,72861808,72865596,72872639,72875615,72877228,72882467,72883064,72887070,72888078,72889786,72891810,72893139,72893377,72893616,72896458,72897056,72900006,72900974,72903709,72905303	72816752,72848498,72851319,72855923,72861914,72865729,72872720,72875737,72877346,72882527,72883232,72887222,72888303,72889957,72891896,72893246,72893535,72893703,72896556,72897151,72900081,72901073,72903783,72905580	Gene ID= ENSG00000083312.17 TPM= 3.19 Transcript Type= NA
chr5	72848184	72908951	72848184	72908951	+	ENST00000506351.6@TNPO1	ENST00000506351.6	protein_coding	72848184,72848385,72851244,72855774,72861808,72865596,72872639,72875615,72877228,72882467,72883064,72887070,72888078,72889786,72891810,72893139,72893377,72893616,72896458,72897056,72900006,72900974,72903709,72905303,72908709	72848251,72848498,72851319,72855923,72861914,72865729,72872720,72875737,72877346,72882527,72883232,72887222,72888303,72889957,72891896,72893246,72893535,72893703,72896556,72897151,72900081,72901073,72903783,72905445,72908951	Gene ID= ENSG00000083312.17 TPM= 12.75 Transcript Type= protein_coding
chr5	72955981	73090522	72955981	73090522	+	ENST00000430046.6@FCHO2	ENST00000430046.6	protein_coding	72955981,72968498,72989427,72990478,72990712,73006445,73015626,73017212,73034657,73037143,73041291,73051349,73052332,73054160,73054525,73056065,73058433,73063841,73068650,73074742,73077338,73078180,73081783,73082761,73087589,73088068	72956129,72968589,72989501,72990619,72990864,73006549,73015724,73017308,73034701,73037215,73041315,73051406,73052507,73054171,73054549,73056107,73058524,73063944,73068779,73074853,73077493,73078312,73081982,73082825,73087753,73090522	Gene ID= ENSG00000157107.13 TPM= 7.44 Transcript Type= protein_coding
chr5	73498408	73505495	73498408	73505495	+	ENST00000335895.12@BTF3	ENST00000335895.12	protein_coding	73498408,73499134,73502488,73502916,73504347,73505192	73498558,73499202,73502601,73503117,73504403,73505495	Gene ID= ENSG00000145741.15 TPM= 236.86 Transcript Type= protein_coding
chr5	73498449	73505635	73498449	73505635	+	ENST00000380591.7@BTF3	ENST00000380591.7	protein_coding	73498449,73499134,73502488,73502916,73504347,73505192	73498799,73499202,73502601,73503117,73504403,73505635	Gene ID= ENSG00000145741.15 TPM= 2.12 Transcript Type= protein_coding
chr5	73552335	73565659	73552335	73565659	-	transcript1611.chr5.nnic@ANKRA2	transcript1611.chr5.nnic	protein_coding	73564964,73562593,73561130,73557575,73555488,73554861,73554322,73553406,73552335	73565659,73562985,73561288,73557640,73555585,73554986,73554388,73553486,73552852	Gene ID= ENSG00000164331.9 TPM= 2.12 Transcript Type= NA
chr5	73552335	73565686	73552335	73565686	-	ENST00000296785.7@ANKRA2	ENST00000296785.7	protein_coding	73565132,73562593,73561130,73557575,73555488,73554861,73554322,73553406,73552335	73565686,73562985,73561288,73557640,73555585,73554986,73554388,73553486,73552852	Gene ID= ENSG00000164331.9 TPM= 10.62 Transcript Type= protein_coding
chr5	73559623	73561477	73559623	73561477	+	transcript1617.chr5.nnic@NA	transcript1617.chr5.nnic	NA	73559623	73561477	Gene ID= novel_gene_chr5_1618 TPM= 3.19 Transcript Type= NA
chr5	73565741	73581969	73565741	73581969	+	ENST00000296792.8@UTP15	ENST00000296792.8	protein_coding	73565741,73567262,73568235,73568420,73569497,73570586,73572489,73576952,73577856,73578751,73579017,73579317,73579877	73565912,73567434,73568327,73568604,73569675,73570711,73572624,73577036,73578005,73578852,73579150,73579375,73581969	Gene ID= ENSG00000164338.9 TPM= 5.31 Transcript Type= protein_coding
chr5	74627406	74641424	74627406	74641424	-	ENST00000302351.8@ENC1	ENST00000302351.8	protein_coding	74640307,74634684,74627406	74641424,74636498,74629992	Gene ID= ENSG00000171617.13 TPM= 1.06 Transcript Type= protein_coding
chr5	74685134	74719955	74685134	74719955	+	transcript1645.chr5.nic@HEXB	transcript1645.chr5.nic	protein_coding	74685134,74689328,74693639,74696693,74696996,74705219,74713506,74715510,74716587,74718291,74718797	74685559,74689473,74693704,74696739,74697106,74705320,74713635,74715690,74716673,74718363,74719955	Gene ID= ENSG00000049860.13 TPM= 4.25 Transcript Type= NA
chr5	74685144	74721288	74685144	74721288	+	ENST00000261416.11@HEXB	ENST00000261416.11	protein_coding	74685144,74689328,74693639,74696693,74696996,74705219,74713506,74715510,74716587,74718291,74718797,74720428,74720643,74721118	74685559,74689473,74693704,74696739,74697106,74705320,74713635,74715690,74716673,74718363,74718971,74720518,74720747,74721288	Gene ID= ENSG00000049860.13 TPM= 172.07 Transcript Type= protein_coding
chr5	74721204	74767371	74721204	74767371	-	ENST00000296805.7@GFM2	ENST00000296805.7	protein_coding	74766938,74763680,74760902,74759369,74758849,74751368,74750579,74747692,74746105,74745678,74741529,74739989,74738502,74738318,74736796,74733022,74730260,74725941,74725640,74722379,74721204	74767371,74763766,74760986,74759426,74758946,74751493,74750667,74747780,74746165,74745857,74741609,74740137,74738642,74738417,74736985,74733098,74730398,74726126,74725755,74722561,74721783	Gene ID= ENSG00000164347.17 TPM= 9.56 Transcript Type= protein_coding
chr5	74721258	74767149	74721258	74767149	-	transcript1634.chr5.nnic@GFM2	transcript1634.chr5.nnic	protein_coding	74766938,74763680,74760902,74759369,74758849,74751368,74750579,74747692,74746105,74745678,74741529,74739989,74738502,74738318,74736796,74733018,74725941,74725640,74722379,74721258	74767149,74763766,74760986,74759426,74758946,74751493,74750667,74747780,74746165,74745857,74741609,74740137,74738642,74738417,74736985,74733098,74726126,74725755,74722561,74721783	Gene ID= ENSG00000164347.17 TPM= 3.19 Transcript Type= NA
chr5	74736669	74767146	74736669	74767146	-	ENST00000427854.6@GFM2	ENST00000427854.6	protein_coding	74766938,74763680,74760902,74759369,74758849,74751368,74750579,74747692,74746105,74745678,74741529,74739989,74738502,74738318,74736669	74767146,74763766,74760986,74759426,74758946,74751493,74750667,74747780,74746165,74745857,74741609,74740137,74738642,74738417,74736985	Gene ID= ENSG00000164347.17 TPM= 2.12 Transcript Type= protein_coding
chr5	74721206	74767121	74721206	74767121	-	ENST00000345239.6@GFM2	ENST00000345239.6	protein_coding	74766938,74763680,74760902,74759369,74758849,74751368,74750579,74747692,74746105,74745678,74741529,74739989,74738318,74736796,74733022,74730260,74725941,74725640,74722379,74721206	74767121,74763766,74760986,74759426,74758946,74751493,74750667,74747780,74746165,74745857,74741609,74740137,74738417,74736985,74733098,74730398,74726126,74725755,74722561,74721783	Gene ID= ENSG00000164347.17 TPM= 1.06 Transcript Type= protein_coding
chr5	74766992	74780113	74766992	74780113	+	ENST00000610426.4@NSA2	ENST00000610426.4	protein_coding	74766992,74768931,74769214,74770631,74773868,74776604	74767363,74769118,74769364,74770810,74774060,74780113	Gene ID= ENSG00000164346.9 TPM= 2.12 Transcript Type= protein_coding
chr5	75337168	75362104	75337168	75362104	+	ENST00000287936.8@HMGCR	ENST00000287936.8	protein_coding	75337168,75342583,75343853,75344245,75345574,75347204,75350042,75350258,75350789,75351068,75351424,75354503,75355056,75355365,75356343,75358657,75359170,75359398,75359985,75360288	75337300,75342770,75343964,75344332,75345658,75347309,75350148,75350374,75350949,75351315,75351602,75354697,75355214,75355522,75356448,75358827,75359310,75359556,75360139,75362104	Gene ID= ENSG00000113161.15 TPM= 4.25 Transcript Type= protein_coding
chr5	75368486	75511633	75368486	75511633	-	transcript1661.chr5.nic@COL4A3BP	transcript1661.chr5.nic	protein_coding	75511112,75505982,75459065,75426371,75425361,75419341,75416876,75411011,75402972,75400205,75399310,75389592,75385902,75384642,75381949,75381072,75379337,75368486	75511633,75506116,75459181,75426478,75425499,75419424,75417033,75411103,75403058,75400297,75399387,75389687,75386034,75384712,75382077,75381201,75379473,75368658	Gene ID= ENSG00000113163.15 TPM= 3.01 Transcript Type= NA
chr5	75373655	75511629	75373655	75511629	-	ENST00000405807.8@COL4A3BP	ENST00000405807.8	protein_coding	75511112,75505982,75459065,75426371,75425361,75419341,75416876,75411011,75402972,75400205,75399310,75389592,75385902,75384642,75381949,75381072,75379337,75373655	75511629,75506116,75459181,75426478,75425499,75419424,75417033,75411103,75403058,75400297,75399387,75389687,75386034,75384712,75382077,75381201,75379473,75374191	Gene ID= ENSG00000113163.15 TPM= 7.25 Transcript Type= protein_coding
chr5	75374158	75511629	75374158	75511629	-	ENST00000261415.11@COL4A3BP	ENST00000261415.11	protein_coding	75511112,75505982,75459065,75426371,75425361,75419341,75416876,75411011,75402972,75400205,75389592,75385902,75384642,75381949,75381072,75379337,75374158	75511629,75506116,75459181,75426478,75425499,75419424,75417033,75411103,75403058,75400297,75389687,75386034,75384712,75382077,75381201,75379473,75374191	Gene ID= ENSG00000113163.15 TPM= 2.47 Transcript Type= protein_coding
chr5	75511756	75601144	75511756	75601144	+	ENST00000241436.8@POLK	ENST00000241436.8	protein_coding	75511756,75547010,75552472,75569340,75573738,75576780,75581209,75583293,75584760,75587026,75590344,75593878,75596222,75597747,75597934	75511914,75547157,75552591,75569492,75573869,75576933,75581448,75583417,75584926,75587058,75590440,75594049,75597178,75597789,75601144	Gene ID= ENSG00000122008.15 TPM= 2.12 Transcript Type= protein_coding
chr5	76615482	76623434	76615482	76623434	-	ENST00000296641.4@F2RL2	ENST00000296641.4	protein_coding	76623167,76615482	76623434,76618642	Gene ID= ENSG00000164220.6 TPM= 2.12 Transcript Type= protein_coding
chr5	76674522	76708096	76674522	76708096	+	ENST00000504477.5@IQGAP2	ENST00000504477.5	protein_coding	76674522,76683115,76683776,76693355,76695454,76697987,76701076,76702482,76707200	76674709,76683217,76683917,76693442,76695666,76698147,76701213,76702590,76708096	Gene ID= ENSG00000145703.15 TPM= 1.06 Transcript Type= nonsense_mediated_decay
chr5	76716043	76735781	76716043	76735781	+	ENST00000319211.4@F2R	ENST00000319211.4	protein_coding	76716043,76732314	76716395,76735781	Gene ID= ENSG00000181104.6 TPM= 9.56 Transcript Type= protein_coding
chr5	76816767	76819627	76816767	76819627	-	transcript1682.chr5.nnic@NA	transcript1682.chr5.nnic	NA	76816767	76819627	Gene ID= novel_gene_chr5_1683 TPM= 2.12 Transcript Type= NA
chr5	76818977	76835315	76818977	76835315	+	ENST00000296677.4@F2RL1	ENST00000296677.4	protein_coding	76818977,76832690	76819264,76835315	Gene ID= ENSG00000164251.4 TPM= 2.12 Transcript Type= protein_coding
chr5	76952713	76969474	76952713	76969474	+	ENST00000274368.8@CRHBP	ENST00000274368.8	protein_coding	76952713,76953601,76954029,76955653,76958741,76963343,76968728	76953215,76953694,76954186,76955863,76958889,76963460,76969474	Gene ID= ENSG00000145708.10 TPM= 2.12 Transcript Type= protein_coding
chr5	77030385	77065234	77030385	77065234	+	ENST00000312916.11@AGGF1	ENST00000312916.11	protein_coding	77030385,77034418,77035541,77036556,77039531,77046347,77048161,77048936,77052706,77053965,77055514,77059616,77061703,77063052	77030976,77034520,77035743,77036720,77039719,77046677,77048272,77048987,77052807,77054130,77055596,77059743,77061802,77065234	Gene ID= ENSG00000164252.12 TPM= 7.44 Transcript Type= protein_coding
chr5	77030380	77055555	77030380	77055555	+	transcript1694.chr5.nic@AGGF1	transcript1694.chr5.nic	protein_coding	77030380,77034418,77035541,77036556,77039531,77046347,77048161,77048936,77052706,77053965,77055514	77030976,77034520,77035743,77036720,77039719,77046677,77048272,77048987,77052807,77054130,77055555	Gene ID= ENSG00000164252.12 TPM= 10.62 Transcript Type= NA
chr5	77072072	77087323	77072072	77087323	-	ENST00000255198.2@ZBED3	ENST00000255198.2	protein_coding	77087111,77078594,77072072	77087323,77078728,77077895	Gene ID= ENSG00000132846.5 TPM= 30.8 Transcript Type= protein_coding
chr5	77079041	77087200	77079041	77087200	-	ENST00000505685.1@ZBED3	ENST00000505685.1	protein_coding	77087111,77079041	77087200,77079382	Gene ID= ENSG00000132846.5 TPM= 1.06 Transcript Type= processed_transcript
chr5	77430933	77492596	77430933	77492596	-	ENST00000296679.8@WDR41	ENST00000296679.8	protein_coding	77492170,77489457,77464761,77463095,77459062,77453817,77451291,77449760,77440813,77438240,77437336,77436261,77430933	77492596,77489572,77464809,77463226,77459124,77453928,77451353,77449870,77440997,77438361,77437424,77436394,77433287	Gene ID= ENSG00000164253.13 TPM= 4.25 Transcript Type= protein_coding
chr5	77708299	77776372	77708299	77776372	-	transcript1728.chr5.nic@TBCA	transcript1728.chr5.nic	protein_coding	77776205,77708299	77776372,77708347	Gene ID= ENSG00000171530.13 TPM= 4.25 Transcript Type= NA
chr5	78000525	78294755	78000525	78294755	-	ENST00000255194.10@AP3B1	ENST00000255194.10	protein_coding	78294452,78267520,78240862,78228144,78227372,78225542,78216055,78181507,78177339,78175784,78175626,78165610,78162819,78156258,78141143,78129121,78128030,78116126,78113752,78110207,78100953,78089393,78039043,78034361,78020692,78015410,78000525	78294755,78267595,78240936,78228239,78227532,78225608,78216237,78181662,78177436,78175838,78175697,78165672,78162951,78156367,78141319,78129307,78128160,78116234,78113923,78110354,78101025,78089499,78039274,78034445,78020789,78015548,78003055	Gene ID= ENSG00000132842.13 TPM= 5.31 Transcript Type= protein_coding
chr5	78002326	78294692	78002326	78294692	-	ENST00000519295.5@AP3B1	ENST00000519295.5	protein_coding	78294440,78267520,78240862,78228144,78227372,78225542,78216055,78181507,78177339,78175784,78175626,78165610,78162819,78156258,78141143,78129121,78128030,78116126,78113752,78110207,78100953,78089393,78039043,78034361,78020692,78015410,78002326	78294692,78267595,78240936,78228239,78227532,78225608,78216237,78181662,78177436,78175838,78175697,78165672,78162951,78156367,78141319,78129307,78128160,78116234,78113923,78110354,78101025,78089499,78039274,78034445,78020789,78015548,78003055	Gene ID= ENSG00000132842.13 TPM= 14.87 Transcript Type= protein_coding
chr5	78358801	78360507	78358801	78360507	-	ENST00000421004.3@SCAMP1-AS1	ENST00000421004.3	lincRNA	78360214,78358801	78360507,78359985	Gene ID= ENSG00000245556.2 TPM= 3.19 Transcript Type= lincRNA
chr5	78360583	78479071	78360583	78479071	+	ENST00000621999.4@SCAMP1	ENST00000621999.4	protein_coding	78360583,78388837,78415520,78416541,78418775,78421801,78449933,78459245,78475504	78360728,78388914,78415618,78416649,78418903,78421960,78450034,78459362,78479071	Gene ID= ENSG00000085365.17 TPM= 1.06 Transcript Type= protein_coding
chr5	78485217	78648862	78485217	78648862	-	transcript1742.chr5.nic@LHFPL2	transcript1742.chr5.nic	protein_coding	78648499,78564813,78509784,78485217	78648862,78564871,78510398,78489153	Gene ID= ENSG00000145685.13 TPM= 9.56 Transcript Type= NA
chr5	78777209	78985785	78777209	78985785	-	ENST00000264914.8@ARSB	ENST00000264914.8	protein_coding	78984937,78969006,78964416,78955295,78885584,78839356,78781852,78777209	78985785,78969192,78964606,78955502,78885827,78839426,78781974,78780662	Gene ID= ENSG00000113273.15 TPM= 27.62 Transcript Type= protein_coding
chr5	78815511	78986087	78815511	78986087	-	ENST00000396151.7@ARSB	ENST00000396151.7	protein_coding	78985899,78984937,78969006,78964416,78955295,78885584,78839356,78815511	78986087,78985558,78969192,78964606,78955502,78885827,78839426,78816114	Gene ID= ENSG00000113273.15 TPM= 1.06 Transcript Type= protein_coding
chr5	79069717	79089466	79069717	79089466	+	ENST00000255192.7@BHMT2	ENST00000255192.7	protein_coding	79069717,79077480,79079369,79080687,79082809,79083192,79083628,79088493	79069815,79077612,79079460,79080878,79082956,79083374,79083856,79089466	Gene ID= ENSG00000132840.9 TPM= 5.31 Transcript Type= protein_coding
chr5	79236102	79306461	79236102	79306461	+	transcript1761.chr5.nic@JMY	transcript1761.chr5.nic	protein_coding	79236102,79277910,79290121,79291130,79300153,79300676,79306375	79237682,79278083,79290271,79291299,79300318,79300863,79306461	Gene ID= ENSG00000152409.8 TPM= 21.24 Transcript Type= NA
chr5	79236102	79278187	79236102	79278187	+	transcript1765.chr5.nic@JMY	transcript1765.chr5.nic	protein_coding	79236102,79277910	79237682,79278187	Gene ID= ENSG00000152409.8 TPM= 2.12 Transcript Type= NA
chr5	79373303	79481791	79373303	79481791	-	transcript1773.chr5.nnic@HOMER1	transcript1773.chr5.nnic	protein_coding	79481632,79456862,79450990,79447053,79439010,79401899,79397527,79396823,79373303	79481791,79457018,79451121,79447145,79439149,79402055,79397637,79396903,79376197	Gene ID= ENSG00000152413.14 TPM= 6.52 Transcript Type= NA
chr5	79400356	79481791	79400356	79481791	-	transcript1779.chr5.nnic@HOMER1	transcript1779.chr5.nnic	protein_coding	79481632,79456862,79450990,79447053,79439010,79400356	79481791,79457018,79451121,79447145,79439149,79402055	Gene ID= ENSG00000152413.14 TPM= 3.34 Transcript Type= NA
chr5	79400356	79514554	79400356	79514554	-	transcript1780.chr5.nic@HOMER1	transcript1780.chr5.nic	protein_coding	79512770,79456862,79450990,79447053,79439010,79400356	79514554,79457018,79451121,79447145,79439149,79402055	Gene ID= ENSG00000152413.14 TPM= 3.7 Transcript Type= NA
chr5	79453847	79456161	79453847	79456161	+	transcript1787.chr5.nnic@NA	transcript1787.chr5.nnic	NA	79453847	79456161	Gene ID= novel_gene_chr5_1788 TPM= 8.5 Transcript Type= NA
chr5	79612441	79686266	79612441	79686266	+	transcript1789.chr5.nnic@PAPD4	transcript1789.chr5.nnic	protein_coding	79612441,79619612,79619994,79623252,79640851,79641105,79642832,79645123,79648617,79649062,79656958,79668892,79679579,79680919,79681982,79685199	79613075,79619785,79620083,79623489,79640965,79641196,79642910,79645192,79648693,79649190,79657001,79669028,79679670,79680984,79682061,79686266	Gene ID= ENSG00000164329.13 TPM= 2.12 Transcript Type= NA
chr5	79612433	79686648	79612433	79686648	+	ENST00000423041.6@PAPD4	ENST00000423041.6	protein_coding	79612433,79613011,79619612,79619994,79623252,79640851,79641105,79642844,79645123,79648617,79649062,79656958,79668892,79679579,79681982,79685199	79612735,79613075,79619785,79620083,79623489,79640965,79641196,79642910,79645192,79648693,79649190,79657001,79669028,79679670,79682061,79686648	Gene ID= ENSG00000164329.13 TPM= 2.66 Transcript Type= protein_coding
chr5	79612420	79686648	79612420	79686648	+	ENST00000453514.5@PAPD4	ENST00000453514.5	protein_coding	79612420,79619612,79619994,79623252,79640851,79641105,79642832,79645123,79648617,79649062,79656958,79668892,79679579,79681982,79685199	79613075,79619785,79620083,79623489,79640965,79641196,79642910,79645192,79648693,79649190,79657001,79669028,79679670,79682061,79686648	Gene ID= ENSG00000164329.13 TPM= 15.4 Transcript Type= protein_coding
chr5	79614093	79615926	79614093	79615926	-	transcript1807.chr5.nnic@NA	transcript1807.chr5.nnic	NA	79614093	79615926	Gene ID= novel_gene_chr5_1808 TPM= 4.25 Transcript Type= NA
chr5	79689776	79800222	79689776	79800222	+	transcript1814.chr5.nnic@CMYA5	transcript1814.chr5.nnic	protein_coding	79689776,79743827,79745222,79747091,79752676,79758753,79761811,79763062,79788971,79790970,79793437,79799370	79690056,79743922,79745455,79747113,79752794,79758902,79761957,79763209,79789104,79791069,79793610,79800222	Gene ID= ENSG00000164309.14 TPM= 159.14 Transcript Type= NA
chr5	79689877	79800222	79689877	79800222	+	ENST00000446378.2@CMYA5	ENST00000446378.2	protein_coding	79689877,79728915,79743827,79745222,79747091,79752676,79758753,79761811,79763062,79788971,79790970,79793437,79799370	79690056,79739403,79743922,79745455,79747113,79752794,79758902,79761957,79763209,79789104,79791069,79793610,79800222	Gene ID= ENSG00000164309.14 TPM= 281.29 Transcript Type= protein_coding
chr5	79689836	79800222	79689836	79800222	+	transcript1820.chr5.nnic@CMYA5	transcript1820.chr5.nnic	protein_coding	79689836,79743827,79745222,79747091,79752676,79758753,79761811,79788971,79790970,79793437,79799370	79690056,79743922,79745455,79747113,79752794,79758902,79763209,79789104,79791069,79793610,79800222	Gene ID= ENSG00000164309.14 TPM= 70.1 Transcript Type= NA
chr5	79689715	79729263	79689715	79729263	+	transcript1830.chr5.nic@CMYA5	transcript1830.chr5.nic	protein_coding	79689715,79728915	79690056,79729263	Gene ID= ENSG00000164309.14 TPM= 19.47 Transcript Type= NA
chr5	79689354	79729349	79689354	79729349	+	transcript1831.chr5.nic@CMYA5	transcript1831.chr5.nic	protein_coding	79689354,79728915	79690056,79729349	Gene ID= ENSG00000164309.14 TPM= 83.2 Transcript Type= NA
chr5	79689354	79729736	79689354	79729736	+	transcript1832.chr5.nic@CMYA5	transcript1832.chr5.nic	protein_coding	79689354,79728915	79690056,79729736	Gene ID= ENSG00000164309.14 TPM= 23.72 Transcript Type= NA
chr5	79689673	79730276	79689673	79730276	+	transcript1833.chr5.nic@CMYA5	transcript1833.chr5.nic	protein_coding	79689673,79728915	79690056,79730276	Gene ID= ENSG00000164309.14 TPM= 39.3 Transcript Type= NA
chr5	79689354	79732788	79689354	79732788	+	transcript1834.chr5.nic@CMYA5	transcript1834.chr5.nic	protein_coding	79689354,79728915	79690056,79732788	Gene ID= ENSG00000164309.14 TPM= 265.54 Transcript Type= NA
chr5	79693337	79696517	79693337	79696517	-	transcript1861.chr5.nnic@NA	transcript1861.chr5.nnic	NA	79693337	79696517	Gene ID= novel_gene_chr5_1862 TPM= 4.25 Transcript Type= NA
chr5	79750012	79751614	79750012	79751614	-	transcript1857.chr5.nnic@NA	transcript1857.chr5.nnic	NA	79750012	79751614	Gene ID= novel_gene_chr5_1858 TPM= 3.19 Transcript Type= NA
chr5	79785020	79787220	79785020	79787220	-	transcript1859.chr5.nnic@NA	transcript1859.chr5.nnic	NA	79785020	79787220	Gene ID= novel_gene_chr5_1860 TPM= 6.37 Transcript Type= NA
chr5	80035348	80083287	80035348	80083287	+	ENST00000350881.6@THBS4	ENST00000350881.6	protein_coding	80035348,80040077,80055785,80058206,80058708,80059440,80059703,80061695,80065409,80067973,80070306,80070643,80071021,80072278,80073275,80076855,80078049,80078921,80079062,80079905,80082406,80083080	80035625,80040280,80056032,80058314,80058790,80059491,80059905,80061832,80065477,80068125,80070410,80070750,80071180,80072396,80073327,80077048,80078227,80078969,80079258,80080077,80082545,80083287	Gene ID= ENSG00000113296.14 TPM= 277.49 Transcript Type= protein_coding
chr5	80080581	80082627	80080581	80082627	-	transcript1886.chr5.nnic@NA	transcript1886.chr5.nnic	NA	80080581	80082627	Gene ID= novel_gene_chr5_1887 TPM= 21.24 Transcript Type= NA
chr5	80085844	80087188	80085844	80087188	-	transcript1890.chr5.nnic@NA	transcript1890.chr5.nnic	NA	80085844	80087188	Gene ID= novel_gene_chr5_1891 TPM= 2.12 Transcript Type= NA
chr5	80408026	80479135	80408026	80479135	+	ENST00000505560.4@ZFYVE16	ENST00000505560.4	protein_coding	80408026,80427492,80434109,80436756,80439936,80443123,80445263,80448026,80449591,80450431,80451485,80455692,80456461,80456945,80459414,80472761,80473754,80474663,80477219	80408153,80427545,80434217,80439007,80440032,80443284,80445405,80448404,80449713,80450586,80451709,80455774,80456565,80457092,80459494,80472923,80473859,80474830,80479135	Gene ID= ENSG00000039319.16 TPM= 1.59 Transcript Type= protein_coding
chr5	80408013	80479350	80408013	80479350	+	ENST00000338008.9@ZFYVE16	ENST00000338008.9	protein_coding	80408013,80434109,80436756,80439936,80443123,80445263,80448026,80449591,80450431,80451485,80455692,80456461,80456945,80459414,80472761,80473754,80474663,80477219	80408153,80434217,80439007,80440032,80443284,80445405,80448404,80449713,80450586,80451709,80455774,80456565,80457092,80459494,80472923,80473859,80474830,80479350	Gene ID= ENSG00000039319.16 TPM= 1.59 Transcript Type= protein_coding
chr5	80411135	80441189	80411135	80441189	+	transcript1904.chr5.nic@ZFYVE16	transcript1904.chr5.nic	protein_coding	80411135,80434109,80436756,80439936	80411773,80434217,80439007,80441189	Gene ID= ENSG00000039319.16 TPM= 2.12 Transcript Type= NA
chr5	80654648	80876460	80654648	80876460	+	ENST00000265081.6@MSH3	ENST00000265081.6	protein_coding	80654648,80656411,80665143,80670097,80672244,80672741,80674983,80678927,80725453,80728851,80741464,80744506,80761546,80767933,80768835,80775694,80778720,80787565,80792733,80813584,80854130,80864813,80873116,80875751	80654964,80656531,80665363,80670309,80672360,80672858,80675128,80679093,80725565,80728965,80741548,80744615,80761678,80768120,80769003,80775758,80778836,80787672,80792844,80813741,80854316,80864942,80873287,80876460	Gene ID= ENSG00000113318.9 TPM= 4.25 Transcript Type= protein_coding
chr5	80960739	81088579	80960739	81088579	+	ENST00000638442.1@RASGRF2	ENST00000638442.1	protein_coding	80960739,81042877,81068032,81070492,81073199,81080121,81080596,81085802,81086835,81087128	80961026,81042983,81068179,81070581,81073452,81080200,81080789,81085911,81086953,81088579	Gene ID= ENSG00000113319.12 TPM= 2.12 Transcript Type= protein_coding
chr5	80960672	81230156	80960672	81230156	+	ENST00000265080.8@RASGRF2	ENST00000265080.8	protein_coding	80960672,81042877,81068032,81070492,81073199,81080121,81080596,81085802,81086835,81092801,81094296,81094856,81108996,81112610,81113538,81123642,81127074,81180175,81201330,81206845,81207246,81208354,81212366,81215876,81217356,81219710,81225678	80961026,81042983,81068179,81070581,81073452,81080200,81080789,81085911,81086953,81092961,81094362,81094992,81109078,81112858,81113920,81123767,81127163,81180281,81201442,81206905,81207349,81208438,81212563,81215955,81217473,81219778,81230156	Gene ID= ENSG00000113319.12 TPM= 2.12 Transcript Type= protein_coding
chr5	81233324	81266397	81233324	81266397	+	ENST00000424301.6@CKMT2	ENST00000424301.6	protein_coding	81233324,81244042,81251113,81252695,81254396,81254993,81256915,81257733,81259120,81263491,81266139	81233377,81244205,81251284,81252893,81254491,81255214,81257000,81257856,81259254,81263616,81266397	Gene ID= ENSG00000131730.15 TPM= 280.22 Transcript Type= protein_coding
chr5	81233320	81266395	81233320	81266395	+	ENST00000437669.5@CKMT2	ENST00000437669.5	protein_coding	81233320,81251113,81252695,81254396,81254993,81256915,81257733,81259120,81263491,81266139	81233381,81251284,81252893,81254491,81255214,81257000,81257856,81259254,81263616,81266395	Gene ID= ENSG00000131730.15 TPM= 633.82 Transcript Type= protein_coding
chr5	81301612	81313297	81301612	81313297	+	ENST00000407610.7@ZCCHC9	ENST00000407610.7	protein_coding	81301612,81304741,81308561,81308946,81311211,81312544	81301698,81305141,81308711,81309038,81311279,81313297	Gene ID= ENSG00000131732.11 TPM= 1.06 Transcript Type= protein_coding
chr5	81301624	81313154	81301624	81313154	+	ENST00000380199.9@ZCCHC9	ENST00000380199.9	protein_coding	81301624,81304741,81308561,81308946,81311211,81312544	81301670,81305141,81308711,81309038,81311279,81313154	Gene ID= ENSG00000131732.11 TPM= 3.19 Transcript Type= protein_coding
chr5	81419936	81751051	81419936	81751051	-	transcript1973.chr5.nnic@SSBP2	transcript1973.chr5.nnic	protein_coding	81750981,81650267,81615473,81513628,81489250,81474496,81473700,81466974,81461055,81448790,81446868,81442653,81440558,81437430,81428585,81419936	81751051,81650339,81615557,81513717,81489309,81474562,81473770,81467041,81461103,81448825,81446922,81442723,81440636,81437458,81428683,81420533	Gene ID= ENSG00000145687.16 TPM= 11.68 Transcript Type= NA
chr5	81646689	81751057	81646689	81751057	-	transcript1981.chr5.nic@SSBP2	transcript1981.chr5.nic	protein_coding	81750981,81646689	81751057,81650339	Gene ID= ENSG00000145687.16 TPM= 3.19 Transcript Type= NA
chr5	81419936	81513717	81419936	81513717	-	ENST00000504985.5@SSBP2	ENST00000504985.5	protein_coding	81513628,81489250,81474496,81473700,81466974,81461055,81448790,81446868,81442653,81440558,81437430,81428585,81419936	81513717,81489309,81474562,81473770,81467065,81461103,81448825,81446922,81442723,81440636,81437458,81428683,81420533	Gene ID= ENSG00000145687.16 TPM= 4.25 Transcript Type= protein_coding
chr5	81972025	82256139	81972025	82256139	+	ENST00000282185.7@ATG10	ENST00000282185.7	protein_coding	81972025,81987559,82058495,82164399,82178490,82252562,82253314,82254068	81972306,81987678,82058602,82164537,82178587,82252659,82253429,82256139	Gene ID= ENSG00000152348.15 TPM= 2.12 Transcript Type= protein_coding
chr5	81972051	82254792	81972051	82254792	+	ENST00000458350.7@ATG10	ENST00000458350.7	protein_coding	81972051,81976193,81987559,82058495,82164399,82178490,82252562,82253314,82254068	81972306,81976327,81987678,82058602,82164537,82178587,82252659,82253429,82254792	Gene ID= ENSG00000152348.15 TPM= 3.19 Transcript Type= protein_coding
chr5	82273358	82278577	82273358	82278577	-	ENST00000296674.12@RPS23	ENST00000296674.12	protein_coding	82278320,82277693,82276398,82273358	82278577,82277852,82276518,82276255	Gene ID= ENSG00000186468.12 TPM= 18.06 Transcript Type= protein_coding
chr5	83052846	83077496	83052846	83077496	-	ENST00000502346.1@TMEM167A	ENST00000502346.1	protein_coding	83077321,83065008,83061877,83052846	83077496,83065117,83061911,83057154	Gene ID= ENSG00000174695.9 TPM= 30.8 Transcript Type= protein_coding
chr5	83096032	83353787	83096032	83353787	+	transcript2011.chr5.nnic@XRCC4	transcript2011.chr5.nnic	protein_coding	83096032,83104910,83111028,83195770,83203552,83204815,83258530,83353125	83096263,83105058,83111203,83195936,83203707,83204921,83258677,83353787	Gene ID= ENSG00000152422.15 TPM= 16.99 Transcript Type= NA
chr5	83077557	83311069	83077557	83311069	+	ENST00000542685.5@XRCC4	ENST00000542685.5	protein_coding	83077557,83104910,83111028,83195770,83203552,83204815,83258530,83310789	83077615,83105058,83111203,83195936,83203707,83204921,83258677,83311069	Gene ID= ENSG00000152422.15 TPM= 1.06 Transcript Type= processed_transcript
chr5	83541387	83581342	83541387	83581342	+	transcript2020.chr5.nic@VCAN	transcript2020.chr5.nic	protein_coding	83541387,83545537,83547971,83553364,83554956,83572416,83579980	83542268,83545650,83548084,83553522,83555038,83572560,83581342	Gene ID= ENSG00000038427.15 TPM= 6.37 Transcript Type= NA
chr5	83525048	83527067	83525048	83527067	-	transcript2022.chr5.nnic@NA	transcript2022.chr5.nnic	NA	83525048	83527067	Gene ID= novel_gene_chr5_2023 TPM= 2.12 Transcript Type= NA
chr5	83637805	83721613	83637805	83721613	-	ENST00000274341.8@HAPLN1	ENST00000274341.8	protein_coding	83720789,83673424,83652453,83644363,83637805	83721613,83673549,83652824,83644665,83641785	Gene ID= ENSG00000145681.10 TPM= 1.06 Transcript Type= protein_coding
chr5	83940554	84384793	83940554	84384793	-	ENST00000296591.9@EDIL3	ENST00000296591.9	protein_coding	84384308,84254084,84229855,84180393,84137241,84106649,84066451,84064700,84060300,83963205,83940554	84384793,84254212,84229884,84180521,84137354,84106830,84066606,84064844,84060484,83963360,83943568	Gene ID= ENSG00000164176.12 TPM= 13.81 Transcript Type= protein_coding
chr5	84383488	84384621	84383488	84384621	-	transcript2035.chr5.nnic@NA	transcript2035.chr5.nnic	NA	84383488	84384621	Gene ID= novel_gene_chr5_2036 TPM= 4.25 Transcript Type= NA
chr5	86617904	86620962	86617904	86620962	+	ENST00000247655.3@COX7C	ENST00000247655.3	protein_coding	86617904,86619353,86620668	86618130,86619496,86620962	Gene ID= ENSG00000127184.12 TPM= 1031.36 Transcript Type= protein_coding
chr5	86617928	86620766	86617928	86620766	+	ENST00000511472.5@COX7C	ENST00000511472.5	protein_coding	86617928,86619353,86620668	86618053,86619496,86620766	Gene ID= ENSG00000127184.12 TPM= 59.48 Transcript Type= processed_transcript
chr5	86617956	86620761	86617956	86620761	+	ENST00000509578.1@COX7C	ENST00000509578.1	protein_coding	86617956,86619353	86618130,86620761	Gene ID= ENSG00000127184.12 TPM= 1.06 Transcript Type= protein_coding
chr5	87394265	87413019	87394265	87413019	-	ENST00000256897.8@CCNH	ENST00000256897.8	protein_coding	87412678,87411224,87409290,87407976,87404844,87401702,87399394,87395044,87394265	87413019,87411346,87409363,87408186,87405007,87401772,87399505,87395104,87394484	Gene ID= ENSG00000134480.13 TPM= 32.93 Transcript Type= protein_coding
chr5	87394274	87412958	87394274	87412958	-	transcript2053.chr5.nic@CCNH	transcript2053.chr5.nic	protein_coding	87412678,87411224,87409290,87407976,87401702,87399394,87395044,87394274	87412958,87411346,87409363,87408186,87401772,87399505,87395104,87394484	Gene ID= ENSG00000134480.13 TPM= 2.12 Transcript Type= NA
chr5	87394274	87412904	87394274	87412904	-	ENST00000504878.1@CCNH	ENST00000504878.1	protein_coding	87412435,87411224,87409290,87407976,87404844,87401702,87399394,87395044,87394274	87412904,87411346,87409363,87408186,87405007,87401772,87399505,87395104,87394484	Gene ID= ENSG00000134480.13 TPM= 4.25 Transcript Type= protein_coding
chr5	88195206	88268848	88195206	88268848	-	ENST00000296595.10@TMEM161B	ENST00000296595.10	protein_coding	88268721,88240813,88228445,88225769,88220563,88207029,88206439,88205814,88202962,88198976,88197669,88195206	88268848,88240916,88228528,88225866,88220719,88207180,88206499,88205954,88203075,88199150,88197765,88196488	Gene ID= ENSG00000164180.13 TPM= 5.31 Transcript Type= protein_coding
chr5	88216351	88217918	88216351	88217918	+	transcript2069.chr5.nnic@NA	transcript2069.chr5.nnic	NA	88216351	88217918	Gene ID= novel_gene_chr5_2070 TPM= 2.12 Transcript Type= NA
chr5	88269005	88287657	88269005	88287657	+	transcript2078.chr5.nic@TMEM161B-AS1	transcript2078.chr5.nic	antisense_RNA	88269005,88270526,88282042,88282715,88285741,88287436	88269119,88270585,88282106,88282866,88285851,88287657	Gene ID= ENSG00000247828.7 TPM= 5.84 Transcript Type= NA
chr5	88268982	88287654	88268982	88287654	+	transcript2079.chr5.nnic@TMEM161B-AS1	transcript2079.chr5.nnic	antisense_RNA	88268982,88270526,88282042,88282715,88287439	88269027,88270585,88282106,88282866,88287654	Gene ID= ENSG00000247828.7 TPM= 3.19 Transcript Type= NA
chr5	88269005	88287657	88269005	88287657	+	transcript2080.chr5.nic@TMEM161B-AS1	transcript2080.chr5.nic	antisense_RNA	88269005,88270526,88282042,88285741,88287436	88269119,88270585,88282106,88285851,88287657	Gene ID= ENSG00000247828.7 TPM= 4.78 Transcript Type= NA
chr5	88268910	88287657	88268910	88287657	+	transcript2081.chr5.nic@TMEM161B-AS1	transcript2081.chr5.nic	antisense_RNA	88268910,88270526,88282042,88287436	88269027,88270585,88282106,88287657	Gene ID= ENSG00000247828.7 TPM= 3.19 Transcript Type= NA
chr5	88268910	88282137	88268910	88282137	+	transcript2086.chr5.nic@TMEM161B-AS1	transcript2086.chr5.nic	antisense_RNA	88268910,88270526,88282042	88269027,88270585,88282137	Gene ID= ENSG00000247828.7 TPM= 3.72 Transcript Type= NA
chr5	88269005	88282137	88269005	88282137	+	transcript2087.chr5.nic@TMEM161B-AS1	transcript2087.chr5.nic	antisense_RNA	88269005,88270526,88282042	88269119,88270585,88282137	Gene ID= ENSG00000247828.7 TPM= 2.66 Transcript Type= NA
chr5	88717117	88883464	88717117	88883464	-	ENST00000504921.6@MEF2C	ENST00000504921.6	protein_coding	88882955,88823735,88804598,88761185,88751857,88749070,88731729,88730211,88729218,88728493,88717117	88883464,88823930,88804801,88761328,88752043,88749117,88731901,88730234,88729347,88728628,88722925	Gene ID= ENSG00000081189.15 TPM= 2.12 Transcript Type= protein_coding
chr5	88720337	88883227	88720337	88883227	-	transcript2097.chr5.nic@MEF2C	transcript2097.chr5.nic	protein_coding	88882955,88823735,88804598,88761185,88751857,88749070,88731729,88729218,88728493,88720337	88883227,88823930,88804801,88761328,88752043,88749117,88731901,88729347,88728628,88722829	Gene ID= ENSG00000081189.15 TPM= 4.25 Transcript Type= NA
chr5	88720829	88883218	88720829	88883218	-	transcript2101.chr5.nic@MEF2C	transcript2101.chr5.nic	protein_coding	88882955,88823735,88804598,88760988,88751857,88749070,88731729,88729218,88728493,88720829	88883218,88823927,88804801,88761125,88752043,88749117,88731901,88729347,88728628,88722829	Gene ID= ENSG00000081189.15 TPM= 2.12 Transcript Type= NA
chr5	88720829	88883184	88720829	88883184	-	ENST00000510942.5@MEF2C	ENST00000510942.5	protein_coding	88882955,88823735,88804598,88761185,88751857,88749070,88731729,88729218,88728493,88720829	88883184,88823927,88804801,88761328,88752043,88749117,88731901,88729347,88728628,88722829	Gene ID= ENSG00000081189.15 TPM= 5.31 Transcript Type= protein_coding
chr5	88798360	88801583	88798360	88801583	-	transcript2115.chr5.nnic@NA	transcript2115.chr5.nnic	NA	88798360	88801583	Gene ID= novel_gene_chr5_2116 TPM= 2.12 Transcript Type= NA
chr5	88883542	88884498	88883542	88884498	+	transcript2113.chr5.nnic@NA	transcript2113.chr5.nnic	NA	88883542	88884498	Gene ID= novel_gene_chr5_2114 TPM= 2.12 Transcript Type= NA
chr5	90392261	90409786	90392261	90409786	-	ENST00000283122.7@CETN3	ENST00000283122.7	protein_coding	90409645,90407699,90405685,90399358,90392261	90409786,90407834,90405799,90399549,90394107	Gene ID= ENSG00000153140.8 TPM= 19.12 Transcript Type= protein_coding
chr5	90393710	90409757	90393710	90409757	-	ENST00000522083.5@CETN3	ENST00000522083.5	protein_coding	90409645,90407699,90405685,90399358,90396493,90393710	90409757,90407834,90405799,90399549,90396564,90394107	Gene ID= ENSG00000153140.8 TPM= 2.12 Transcript Type= protein_coding
chr5	90458203	90474768	90458203	90474768	-	ENST00000316610.6@MBLAC2	ENST00000316610.6	protein_coding	90473839,90458203	90474768,90461552	Gene ID= ENSG00000176055.9 TPM= 4.25 Transcript Type= protein_coding
chr5	90515626	90529581	90515626	90529581	-	ENST00000315948.10@LYSMD3	ENST00000315948.10	protein_coding	90529448,90525035,90515626	90529581,90525300,90519484	Gene ID= ENSG00000176018.12 TPM= 19.12 Transcript Type= protein_coding
chr5	91368724	91383359	91368724	91383359	-	ENST00000265138.3@ARRDC3	ENST00000265138.3	protein_coding	91382813,91378694,91376621,91375511,91374922,91374114,91373684,91368724	91383359,91378775,91376768,91375613,91375178,91374276,91373838,91371456	Gene ID= ENSG00000113369.8 TPM= 20.18 Transcript Type= protein_coding
chr5	91380349	91420715	91380349	91420715	+	ENST00000625713.2@ARRDC3-AS1	ENST00000625713.2	lincRNA	91380349,91418709,91418855	91380924,91418771,91420715	Gene ID= ENSG00000281357.2 TPM= 1.06 Transcript Type= lincRNA
chr5	93583337	93594615	93583337	93594615	+	ENST00000327111.7@NR2F1	ENST00000327111.7	protein_coding	93583337,93587917,93593562	93585486,93588444,93594615	Gene ID= ENSG00000175745.11 TPM= 1.06 Transcript Type= protein_coding
chr5	93618071	93621537	93618071	93621537	-	transcript2154.chr5.nnic@FAM172A	transcript2154.chr5.nnic	protein_coding	93621366,93618071	93621537,93621129	Gene ID= ENSG00000113391.18 TPM= 2.12 Transcript Type= NA
chr5	93618069	94111635	93618069	94111635	-	ENST00000395965.7@FAM172A	ENST00000395965.7	protein_coding	94111511,94074646,94053126,94050731,93964458,93958777,93881470,93824148,93784383,93776159,93618069	94111635,94074769,94053227,94050831,93964523,93958968,93881688,93824267,93784499,93776243,93621129	Gene ID= ENSG00000113391.18 TPM= 7.44 Transcript Type= protein_coding
chr5	94618347	94697621	94618347	94697621	+	ENST00000265140.9@SLF1	ENST00000265140.9	protein_coding	94618347,94628811,94629092,94630503,94643273,94649454,94651702,94653272,94654630,94662298,94663750,94665861,94670151,94670843,94678808,94686573,94688506,94689473,94691564,94692074,94694831	94618765,94628924,94629167,94630743,94643435,94649597,94651845,94653421,94654752,94662351,94663908,94666024,94670279,94671008,94678955,94686718,94688669,94689606,94691656,94692256,94697621	Gene ID= ENSG00000133302.12 TPM= 2.12 Transcript Type= protein_coding
chr5	95463895	95555007	95463895	95555007	-	ENST00000358746.6@TTC37	ENST00000358746.6	protein_coding	95554936,95550581,95548560,95547061,95543184,95541815,95541305,95540690,95537043,95536817,95530089,95529001,95528013,95525587,95525398,95524465,95523655,95523202,95522054,95520716,95517146,95516916,95516672,95516525,95516353,95514855,95513571,95512477,95509594,95506934,95503814,95502880,95498370,95497416,95494964,95494682,95490908,95484724,95482473,95478290,95469780,95467866,95463895	95555007,95550650,95548715,95547151,95543327,95541906,95541380,95540830,95537141,95536925,95530229,95529102,95528152,95525673,95525501,95524591,95523834,95523326,95522307,95520818,95517322,95517060,95516750,95516586,95516409,95514923,95513645,95512618,95509687,95507011,95503938,95503003,95498591,95497488,95495017,95494793,95491036,95484845,95482631,95478442,95469910,95467989,95464681	Gene ID= ENSG00000198677.10 TPM= 20.18 Transcript Type= protein_coding
chr5	95555074	95605064	95555074	95605064	+	ENST00000380009.8@ARSK	ENST00000380009.8	protein_coding	95555074,95565998,95567890,95582916,95586562,95591401,95600847,95603237	95555404,95566127,95568049,95583198,95586733,95591625,95601071,95605064	Gene ID= ENSG00000164291.16 TPM= 3.19 Transcript Type= protein_coding
chr5	95555167	95557057	95555167	95557057	+	ENST00000504763.1@ARSK	ENST00000504763.1	protein_coding	95555167,95556208	95555404,95557057	Gene ID= ENSG00000164291.16 TPM= 1.06 Transcript Type= protein_coding
chr5	95646772	95658082	95646772	95658082	+	ENST00000380005.8@RFESD	ENST00000380005.8	protein_coding	95646772,95652137,95653117,95654061,95654333,95656046	95646817,95652331,95653214,95654236,95654367,95658082	Gene ID= ENSG00000175449.13 TPM= 1.06 Transcript Type= protein_coding
chr5	95730804	95732467	95730804	95732467	-	transcript2181.chr5.nnic@AC008840.1	transcript2181.chr5.nnic	antisense_RNA	95731941,95730804	95732467,95731790	Gene ID= ENSG00000250240.5 TPM= 2.12 Transcript Type= NA
chr5	95731155	95752287	95731155	95752287	+	transcript2177.chr5.nic@RHOBTB3	transcript2177.chr5.nic	protein_coding	95731155,95731859,95736889,95748333,95752239	95731684,95732084,95737075,95748487,95752287	Gene ID= ENSG00000164292.12 TPM= 58.42 Transcript Type= NA
chr5	95731175	95796367	95731175	95796367	+	ENST00000379982.7@RHOBTB3	ENST00000379982.7	protein_coding	95731175,95731859,95736889,95748333,95752239,95755396,95763508,95768046,95780252,95783797,95788762,95793059	95731684,95732084,95737075,95748487,95752350,95755761,95763620,95768166,95780425,95783963,95788858,95796367	Gene ID= ENSG00000164292.12 TPM= 14.87 Transcript Type= protein_coding
chr5	95731146	95732751	95731146	95732751	+	ENST00000506817.1@RHOBTB3	ENST00000506817.1	protein_coding	95731146,95731859	95731684,95732751	Gene ID= ENSG00000164292.12 TPM= 3.19 Transcript Type= protein_coding
chr5	95813849	95823005	95813849	95823005	-	ENST00000237858.10@GLRX	ENST00000237858.10	protein_coding	95822456,95816507,95813849	95823005,95816626,95814389	Gene ID= ENSG00000173221.13 TPM= 202.87 Transcript Type= protein_coding
chr5	95813971	95822714	95813971	95822714	-	ENST00000379979.8@GLRX	ENST00000379979.8	protein_coding	95822456,95816507,95813971	95822714,95816626,95814957	Gene ID= ENSG00000173221.13 TPM= 2.12 Transcript Type= protein_coding
chr5	95814563	95822722	95814563	95822722	-	ENST00000505427.1@GLRX	ENST00000505427.1	protein_coding	95822456,95816507,95814563	95822722,95816626,95814807	Gene ID= ENSG00000173221.13 TPM= 1.06 Transcript Type= protein_coding
chr5	95885098	95962071	95885098	95962071	-	ENST00000237853.8@ELL2	ENST00000237853.8	protein_coding	95961575,95943002,95919424,95913771,95906523,95900956,95900693,95898240,95895628,95891103,95889086,95885098	95962071,95943049,95919545,95913934,95906782,95901080,95900780,95898810,95895691,95891274,95889130,95888987	Gene ID= ENSG00000118985.15 TPM= 3.19 Transcript Type= protein_coding
chr5	96221624	96224717	96221624	96224717	+	transcript2194.chr5.nnic@NA	transcript2194.chr5.nnic	NA	96221624	96224717	Gene ID= novel_gene_chr5_2195 TPM= 3.19 Transcript Type= NA
chr5	96662147	96774679	96662147	96774679	+	transcript2207.chr5.nic@CAST	transcript2207.chr5.nic	protein_coding	96662147,96675539,96695836,96722639,96726794,96727489,96729153,96729612,96730780,96736172,96737849,96740038,96740745,96741266,96741494,96742655,96746342,96747345,96748518,96750587,96754060,96754658,96757444,96757583,96762274,96765221,96766053,96767438,96767907,96770531,96771644,96772640	96662497,96675601,96695907,96722698,96726859,96727530,96729209,96729725,96730860,96736240,96737947,96740118,96740783,96741358,96741580,96742756,96746425,96747392,96748613,96750682,96754161,96754741,96757494,96757654,96762372,96765325,96766145,96767482,96767999,96770602,96771702,96774679	Gene ID= ENSG00000153113.23 TPM= 12.46 Transcript Type= NA
chr5	96743569	96773412	96743569	96773412	+	ENST00000484552.5@CAST	ENST00000484552.5	protein_coding	96743569,96746342,96747345,96748518,96750587,96754060,96754658,96757444,96757583,96762274,96765224,96766053,96767438,96767907,96770531,96771644,96772640,96773268	96743746,96746425,96747392,96748613,96750682,96754161,96754741,96757494,96757654,96762372,96765325,96766145,96767482,96767999,96770602,96771702,96772887,96773412	Gene ID= ENSG00000153113.23 TPM= 1.06 Transcript Type= nonsense_mediated_decay
chr5	96662237	96774683	96662237	96774683	+	ENST00000395812.6@CAST	ENST00000395812.6	protein_coding	96662237,96675539,96695836,96722639,96727489,96729612,96730780,96736172,96737849,96740038,96740745,96741266,96741494,96742655,96746342,96747345,96748518,96750587,96754060,96754658,96757444,96757583,96762274,96765221,96766053,96767438,96767907,96770531,96771644,96772640	96662497,96675601,96695907,96722698,96727530,96729725,96730860,96736240,96737947,96740118,96740783,96741358,96741580,96742756,96746425,96747392,96748613,96750682,96754161,96754741,96757494,96757654,96762372,96765325,96766145,96767482,96767999,96770602,96771702,96774683	Gene ID= ENSG00000153113.23 TPM= 4.88 Transcript Type= protein_coding
chr5	96702806	96772786	96702806	96772786	+	ENST00000511782.5@CAST	ENST00000511782.5	protein_coding	96702806,96722639,96726794,96727489,96729153,96729612,96730780,96736172,96737849,96740038,96740745,96741266,96741494,96742655,96746342,96747345,96748518,96750587,96754060,96754658,96757444,96757583,96762274,96765221,96766053,96767438,96767907,96770531,96771644,96772640	96702915,96722718,96726859,96727530,96729209,96729725,96730860,96736240,96737947,96740118,96740783,96741358,96741580,96742756,96746425,96747392,96748613,96750682,96754161,96754741,96757494,96757654,96762372,96765325,96766145,96767482,96767999,96770602,96771702,96772786	Gene ID= ENSG00000153113.23 TPM= 15.93 Transcript Type= protein_coding
chr5	96702789	96774679	96702789	96774679	+	ENST00000395813.5@CAST	ENST00000395813.5	protein_coding	96702789,96722639,96726794,96727489,96729153,96729612,96730780,96736172,96737849,96740038,96740745,96741266,96741494,96742655,96746342,96747345,96748518,96750587,96754060,96754658,96757444,96757583,96762274,96765221,96766053,96767438,96767907,96770531,96771644,96772640	96702915,96722698,96726859,96727530,96729209,96729725,96730860,96736240,96737947,96740118,96740783,96741358,96741580,96742756,96746425,96747392,96748613,96750682,96754161,96754741,96757494,96757654,96762372,96765325,96766145,96767482,96767999,96770602,96771702,96774679	Gene ID= ENSG00000153113.23 TPM= 30.37 Transcript Type= protein_coding
chr5	96702801	96774683	96702801	96774683	+	ENST00000309190.9@CAST	ENST00000309190.9	protein_coding	96702801,96722639,96727489,96729153,96729612,96730780,96736172,96737849,96740038,96740745,96741266,96741494,96742655,96746342,96747345,96748518,96750587,96754060,96754658,96757444,96757583,96762274,96765221,96766053,96767438,96767907,96770531,96771644,96772640	96702915,96722698,96727530,96729209,96729725,96730860,96736240,96737947,96740118,96740783,96741358,96741580,96742756,96746425,96747392,96748613,96750682,96754161,96754741,96757494,96757654,96762372,96765325,96766145,96767482,96767999,96770602,96771702,96774683	Gene ID= ENSG00000153113.23 TPM= 5.94 Transcript Type= protein_coding
chr5	96702800	96773570	96702800	96773570	+	ENST00000511049.5@CAST	ENST00000511049.5	protein_coding	96702800,96722639,96726754,96727489,96729153,96729612,96730780,96736172,96737849,96740038,96740745,96741266,96741494,96742655,96746342,96747345,96748518,96750587,96754060,96754658,96757444,96757583,96762274,96765224,96766053,96767438,96767907,96770531,96771644,96772640	96702915,96722698,96726859,96727530,96729209,96729725,96730860,96736240,96737947,96740118,96740783,96741358,96741580,96742756,96746425,96747392,96748613,96750682,96754161,96754741,96757494,96757654,96762372,96765325,96766145,96767482,96767999,96770602,96771702,96773570	Gene ID= ENSG00000153113.23 TPM= 2.12 Transcript Type= protein_coding
chr5	96731475	96733702	96731475	96733702	-	transcript2312.chr5.nnic@NA	transcript2312.chr5.nnic	NA	96731475	96733702	Gene ID= novel_gene_chr5_2313 TPM= 6.37 Transcript Type= NA
chr5	96760810	96808100	96760810	96808100	-	ENST00000296754.7@ERAP1	ENST00000296754.7	protein_coding	96807860,96803403,96800862,96797175,96795042,96793803,96793400,96792061,96790512,96790296,96788531,96786470,96785788,96783924,96783051,96781693,96781058,96780423,96776404,96760810	96808100,96803943,96801000,96797309,96795162,96793957,96793513,96792192,96790643,96790367,96788685,96786549,96785971,96784080,96783235,96781854,96781198,96780504,96776551,96763228	Gene ID= ENSG00000164307.12 TPM= 1.59 Transcript Type= protein_coding
chr5	96774484	96807909	96774484	96807909	-	ENST00000443439.6@ERAP1	ENST00000443439.6	protein_coding	96807860,96803403,96800862,96797175,96795042,96793803,96793400,96792061,96790512,96790296,96788531,96786470,96785788,96783924,96783051,96781693,96781058,96780423,96774484	96807909,96803943,96801000,96797309,96795162,96793957,96793513,96792192,96790643,96790367,96788685,96786549,96785971,96784080,96783235,96781854,96781198,96780504,96776551	Gene ID= ENSG00000164307.12 TPM= 7.97 Transcript Type= protein_coding
chr5	96875939	96919716	96875939	96919716	+	ENST00000437043.7@ERAP2	ENST00000437043.7	protein_coding	96875939,96879564,96883792,96886655,96889185,96892299,96895246,96896373,96896732,96900121,96901506,96902274,96903377,96908961,96909580,96912637,96913317,96915688,96917462	96876527,96880260,96883930,96886789,96889305,96892453,96895359,96896504,96896863,96900189,96901681,96902353,96903560,96909117,96909764,96912798,96913457,96915769,96919716	Gene ID= ENSG00000164308.16 TPM= 2.12 Transcript Type= protein_coding
chr5	96936102	97007663	96936102	97007663	+	transcript2323.chr5.nic@LNPEP	transcript2323.chr5.nic	protein_coding	96936102,96979138,96985080,96986539,96993015,96993817,96996390,96998014,97003415,97006073,97006427	96936174,96979978,96985218,96986670,96993135,96993971,96996503,96998145,97003546,97006233,97007663	Gene ID= ENSG00000113441.15 TPM= 4.25 Transcript Type= NA
chr5	97160867	97183260	97160867	97183260	-	ENST00000283109.7@RIOK2	ENST00000283109.7	protein_coding	97183126,97179055,97177732,97177116,97173175,97171206,97168760,97167467,97165051,97160867	97183260,97179193,97177848,97177291,97173263,97171397,97168852,97167991,97165147,97163225	Gene ID= ENSG00000058729.10 TPM= 3.19 Transcript Type= protein_coding
chr5	98773635	98794055	98773635	98794055	+	ENST00000513185.1@RGMB	ENST00000513185.1	protein_coding	98773635,98779580,98793085	98774206,98780088,98794055	Gene ID= ENSG00000174136.11 TPM= 6.37 Transcript Type= protein_coding
chr5	98793774	98794546	98793774	98794546	-	transcript2337.chr5.nnic@NA	transcript2337.chr5.nnic	NA	98793774	98794546	Gene ID= novel_gene_chr5_2338 TPM= 3.19 Transcript Type= NA
chr5	98879621	98929007	98879621	98929007	-	transcript2340.chr5.nic@CHD1	transcript2340.chr5.nic	protein_coding	98928539,98926334,98904897,98903792,98902900,98901186,98900811,98899480,98898664,98898256,98897193,98896226,98894597,98893416,98892525,98889076,98888088,98885578,98883088,98881975,98881279,98881076,98879621	98929007,98926534,98905098,98903908,98902964,98901335,98901082,98899705,98898764,98898434,98897320,98896442,98894686,98893606,98892713,98889238,98888240,98885649,98883237,98882123,98881375,98881171,98879728	Gene ID= ENSG00000153922.10 TPM= 7.44 Transcript Type= NA
chr5	98941561	98943805	98941561	98943805	-	transcript2347.chr5.nnic@NA	transcript2347.chr5.nnic	NA	98941561	98943805	Gene ID= novel_gene_chr5_2348 TPM= 3.19 Transcript Type= NA
chr5	100535305	100586741	100535305	100586741	+	ENST00000312637.4@FAM174A	ENST00000312637.4	protein_coding	100535305,100562054,100586181	100535964,100562188,100586741	Gene ID= ENSG00000174132.8 TPM= 40.36 Transcript Type= protein_coding
chr5	102755131	103029713	102755131	103029713	+	transcript2357.chr5.nic@PAM	transcript2357.chr5.nic	protein_coding	102755131,102865823,102867273,102901356,102913934,102924957,102926585,102946837,102948378,102949537,102949902,102950717,102959875,102961158,102974116,102990272,103003033,103005154,103006801,103007457,103009751,103017334,103019790,103025131,103028182,103028887	102755348,102866284,102867393,102901413,102914021,102925042,102926668,102946885,102948445,102949617,102949978,102950820,102960059,102961229,102974436,102990401,103003149,103005226,103007011,103007657,103009866,103017433,103019843,103025334,103028238,103029713	Gene ID= ENSG00000145730.20 TPM= 237.75 Transcript Type= NA
chr5	102755131	103029713	102755131	103029713	+	transcript2368.chr5.nic@PAM	transcript2368.chr5.nic	protein_coding	102755131,102865823,102867273,102901356,102913934,102924957,102926585,102946837,102948378,102949537,102949902,102950717,102959875,102961158,102974116,102990272,103003033,103005154,103006801,103007457,103009751,103017334,103019790,103028182,103028887	102755348,102866284,102867393,102901413,102914021,102925042,102926668,102946885,102948445,102949617,102949978,102950820,102960059,102961229,102974436,102990401,103003149,103005226,103007011,103007657,103009866,103017433,103019843,103028238,103029713	Gene ID= ENSG00000145730.20 TPM= 98.81 Transcript Type= NA
chr5	102865823	103029713	102865823	103029713	+	ENST00000348126.6@PAM	ENST00000348126.6	protein_coding	102865823,102867273,102901356,102913934,102924957,102926585,102946837,102948378,102949537,102949902,102950717,102959875,102961158,102990272,103003033,103005154,103006801,103007457,103009751,103017334,103019790,103025131,103028185,103028887	102866284,102867393,102901413,102914021,102925042,102926668,102946885,102948445,102949617,102949978,102950820,102960059,102961229,102990401,103003149,103005226,103007011,103007657,103009866,103017433,103019843,103025334,103028238,103029713	Gene ID= ENSG00000145730.20 TPM= 75.12 Transcript Type= protein_coding
chr5	103007559	103029730	103007559	103029730	+	ENST00000504691.1@PAM	ENST00000504691.1	protein_coding	103007559,103009751,103017334,103019790,103025131,103028887	103007657,103009866,103017433,103019843,103025334,103029730	Gene ID= ENSG00000145730.20 TPM= 18.06 Transcript Type= protein_coding
chr5	103086333	103120151	103086333	103120151	-	ENST00000399004.6@GIN1	ENST00000399004.6	protein_coding	103120064,103108569,103106716,103104541,103097590,103097314,103096541,103086333	103120151,103108714,103106909,103104846,103097781,103097490,103096826,103088172	Gene ID= ENSG00000145723.16 TPM= 1.06 Transcript Type= protein_coding
chr5	103120264	103203206	103120264	103203206	+	ENST00000358359.7@PPIP5K2	ENST00000358359.7	protein_coding	103120264,103129306,103133453,103136732,103138384,103146527,103147931,103149152,103151253,103152648,103153848,103154670,103154834,103155909,103158188,103158452,103159146,103167179,103168072,103173155,103173858,103177667,103177864,103180021,103183234,103184672,103186320,103187314,103190842,103194900,103201522	103120488,103129703,103133648,103136822,103138469,103146681,103148032,103149313,103151374,103152749,103153934,103154745,103154943,103155994,103158313,103158573,103159328,103167320,103168295,103173282,103173972,103177774,103177980,103180188,103183407,103184744,103186439,103187376,103190982,103195025,103203206	Gene ID= ENSG00000145725.19 TPM= 1.06 Transcript Type= protein_coding
chr5	103120200	103212799	103120200	103212799	+	ENST00000321521.13@PPIP5K2	ENST00000321521.13	protein_coding	103120200,103129306,103133453,103136732,103138384,103146527,103147931,103149152,103151253,103152648,103153848,103154670,103154834,103155909,103158188,103158452,103159146,103167179,103168072,103173155,103173858,103177667,103177864,103180021,103183234,103184672,103186320,103190842,103194900,103201522	103120488,103129703,103133648,103136822,103138469,103146681,103148032,103149313,103151374,103152749,103153934,103154745,103154943,103155994,103158313,103158573,103159328,103167320,103168295,103173282,103173972,103177774,103177980,103180188,103183407,103184744,103186439,103190982,103195025,103212799	Gene ID= ENSG00000145725.19 TPM= 1.06 Transcript Type= protein_coding
chr5	103120270	103203206	103120270	103203206	+	transcript2419.chr5.nic@PPIP5K2	transcript2419.chr5.nic	protein_coding	103120270,103129306,103133453,103136732,103138384,103146527,103147931,103149152,103151253,103152648,103153848,103154670,103154834,103155909,103158188,103158452,103159146,103167179,103168072,103173155,103173858,103177667,103177864,103180021,103184672,103186320,103187314,103190842,103194900,103201522	103120488,103129703,103133648,103136822,103138469,103146681,103148032,103149313,103151374,103152749,103153934,103154745,103154943,103155994,103158313,103158573,103159328,103167320,103168295,103173282,103173972,103177774,103177980,103180188,103184744,103186439,103187376,103190982,103195025,103203206	Gene ID= ENSG00000145725.19 TPM= 2.12 Transcript Type= NA
chr5	103120270	103203206	103120270	103203206	+	transcript2421.chr5.nic@PPIP5K2	transcript2421.chr5.nic	protein_coding	103120270,103129306,103133453,103136732,103138384,103146527,103147931,103149152,103151253,103152648,103153848,103154670,103154834,103155909,103158188,103158452,103159146,103167179,103168072,103173155,103173858,103177667,103177864,103180021,103184672,103190842,103194900,103201522	103120488,103129703,103133648,103136822,103138469,103146681,103148032,103149313,103151374,103152749,103153934,103154745,103154943,103155994,103158313,103158573,103159328,103167320,103168295,103173282,103173972,103177774,103177980,103180188,103184744,103190982,103195025,103203206	Gene ID= ENSG00000145725.19 TPM= 2.12 Transcript Type= NA
chr5	103183183	103202719	103183183	103202719	+	transcript2425.chr5.nic@PPIP5K2	transcript2425.chr5.nic	protein_coding	103183183,103186320,103187314,103190842,103194900,103201522	103184744,103186439,103187376,103190982,103195025,103202719	Gene ID= ENSG00000145725.19 TPM= 4.25 Transcript Type= NA
chr5	103258702	103278660	103258702	103278660	+	ENST00000319933.6@C5orf30	ENST00000319933.6	protein_coding	103258702,103265908,103275897	103258896,103265997,103278660	Gene ID= ENSG00000181751.9 TPM= 6.37 Transcript Type= protein_coding
chr5	103548855	103562793	103548855	103562793	-	ENST00000230792.6@NUDT12	ENST00000230792.6	protein_coding	103562703,103560043,103558879,103555931,103554740,103552217,103548855	103562793,103560254,103559468,103556098,103554853,103552416,103550971	Gene ID= ENSG00000112874.9 TPM= 12.75 Transcript Type= protein_coding
chr5	107070425	107217778	107070425	107217778	-	transcript2435.chr5.nnic@NA	transcript2435.chr5.nnic	NA	107217729,107084661,107070425	107217778,107084708,107072180	Gene ID= novel_gene_chr5_2436 TPM= 2.12 Transcript Type= NA
chr5	107378109	107378944	107378109	107378944	-	transcript2440.chr5.nnic@NA	transcript2440.chr5.nnic	NA	107378109	107378944	Gene ID= novel_gene_chr5_2441 TPM= 2.12 Transcript Type= NA
chr5	107665834	107670053	107665834	107670053	+	transcript2445.chr5.nnic@NA	transcript2445.chr5.nnic	NA	107665834	107670053	Gene ID= novel_gene_chr5_2446 TPM= 144.45 Transcript Type= NA
chr5	107669388	107671931	107669388	107671931	+	transcript2447.chr5.nnic@NA	transcript2447.chr5.nnic	NA	107669388	107671931	Gene ID= novel_gene_chr5_2448 TPM= 13.81 Transcript Type= NA
chr5	107670980	107673332	107670980	107673332	+	transcript2451.chr5.nnic@NA	transcript2451.chr5.nnic	NA	107670980	107673332	Gene ID= novel_gene_chr5_2452 TPM= 3.19 Transcript Type= NA
chr5	108199255	108381437	108199255	108381437	-	transcript2459.chr5.nnic@FBXL17	transcript2459.chr5.nnic	protein_coding	108380699,108367831,108364738,108348399,108224117,108199255	108381437,108367953,108364995,108348530,108224228,108200162	Gene ID= ENSG00000145743.15 TPM= 2.66 Transcript Type= NA
chr5	108222673	108381361	108222673	108381361	-	transcript2462.chr5.nic@FBXL17	transcript2462.chr5.nic	protein_coding	108380699,108367831,108364738,108348399,108222673	108381361,108367953,108364995,108348530,108224228	Gene ID= ENSG00000145743.15 TPM= 3.72 Transcript Type= NA
chr5	108297735	108380569	108297735	108380569	-	transcript2464.chr5.nnic@FBXL17	transcript2464.chr5.nnic	protein_coding	108380409,108367831,108364738,108348399,108297735	108380569,108367953,108364995,108348530,108299837	Gene ID= ENSG00000145743.15 TPM= 2.12 Transcript Type= NA
chr5	108727825	108728260	108727825	108728260	-	ENST00000606054.1@LINC01023	ENST00000606054.1	lincRNA	108727825	108728260	Gene ID= ENSG00000272523.1 TPM= 3.19 Transcript Type= lincRNA
chr5	108748459	109188400	108748459	109188400	+	transcript2471.chr5.nnic@FER	transcript2471.chr5.nnic	protein_coding	108748459,108798124,108832770,108835708,108867767,108871365,108872093,108883396,108897659,108946130,108954729,108959225,109037422,109044680,109047104,109100396,109180747,109186200,109187433,109188273	108748993,108798389,108832943,108835807,108867950,108871502,108872212,108883518,108897848,108946222,108954932,108959347,109037478,109044795,109047198,109100519,109180901,109186322,109188182,109188400	Gene ID= ENSG00000151422.12 TPM= 3.19 Transcript Type= NA
chr5	108927254	108930376	108927254	108930376	-	transcript2476.chr5.nnic@NA	transcript2476.chr5.nnic	NA	108927254	108930376	Gene ID= novel_gene_chr5_2477 TPM= 3.19 Transcript Type= NA
chr5	109378328	109410010	109378328	109410010	-	transcript2488.chr5.nic@PJA2	transcript2488.chr5.nic	protein_coding	109409842,109383403,109381503,109378328	109410010,109383520,109381703,109379254	Gene ID= ENSG00000198961.9 TPM= 6.37 Transcript Type= NA
chr5	109334709	109409994	109334709	109409994	-	ENST00000361189.6@PJA2	ENST00000361189.6	protein_coding	109409842,109383403,109381503,109378204,109368561,109362840,109355915,109344705,109344190,109334709	109409994,109383520,109381703,109379254,109368746,109363022,109356026,109344819,109344311,109337356	Gene ID= ENSG00000198961.9 TPM= 155.08 Transcript Type= protein_coding
chr5	109339122	109339448	109339122	109339448	+	transcript2493.chr5.nnic@NA	transcript2493.chr5.nnic	NA	109339122	109339448	Gene ID= novel_gene_chr5_2494 TPM= 2.12 Transcript Type= NA
chr5	109687788	109690017	109687788	109690017	-	transcript2499.chr5.nnic@NA	transcript2499.chr5.nnic	NA	109687788	109690017	Gene ID= novel_gene_chr5_2500 TPM= 3.19 Transcript Type= NA
chr5	109689366	109867178	109689366	109867178	+	ENST00000261483.4@MAN2A1	ENST00000261483.4	protein_coding	109689366,109713520,109716120,109729342,109755329,109767535,109770355,109774788,109781396,109784744,109788934,109789460,109817273,109819669,109820220,109823723,109842328,109845865,109847657,109855140,109865036,109866846	109690552,109713774,109716264,109729513,109755456,109767708,109770541,109774965,109781598,109784926,109789048,109789527,109817438,109819887,109820342,109823837,109842461,109846006,109847790,109855334,109865146,109867178	Gene ID= ENSG00000112893.9 TPM= 4.25 Transcript Type= protein_coding
chr5	110738991	110765157	110738991	110765157	+	transcript2504.chr5.nnic@SLC25A46	transcript2504.chr5.nnic	protein_coding	110738991,110742047,110743730,110746269,110748163,110755465,110756702,110761204,110762850	110739402,110742089,110743787,110746346,110748263,110755521,110756759,110761447,110765157	Gene ID= ENSG00000164209.16 TPM= 4.25 Transcript Type= NA
chr5	110738994	110762784	110738994	110762784	+	ENST00000355943.7@SLC25A46	ENST00000355943.7	protein_coding	110738994,110742047,110743730,110746269,110748163,110755465,110756702,110761204	110739402,110742089,110743787,110746346,110748263,110755521,110756759,110762784	Gene ID= ENSG00000164209.16 TPM= 37.18 Transcript Type= protein_coding
chr5	111073314	111078024	111073314	111078024	+	ENST00000379706.4@TSLP	ENST00000379706.4	protein_coding	111073314,111075946	111073645,111078024	Gene ID= ENSG00000145777.14 TPM= 7.44 Transcript Type= protein_coding
chr5	111496033	111512510	111496033	111512510	-	ENST00000296632.7@STARD4	ENST00000296632.7	protein_coding	111512385,111507329,111506330,111501962,111501002,111496033	111512510,111507442,111506379,111502088,111501116,111500106	Gene ID= ENSG00000164211.12 TPM= 5.31 Transcript Type= protein_coding
chr5	111729937	111732677	111729937	111732677	+	transcript2536.chr5.nnic@NA	transcript2536.chr5.nnic	NA	111729937	111732677	Gene ID= novel_gene_chr5_2537 TPM= 12.75 Transcript Type= NA
chr5	111733502	111735507	111733502	111735507	-	transcript2538.chr5.nnic@NA	transcript2538.chr5.nnic	NA	111733502	111735507	Gene ID= novel_gene_chr5_2539 TPM= 2.12 Transcript Type= NA
chr5	111745411	111748777	111745411	111748777	-	transcript2540.chr5.nnic@NA	transcript2540.chr5.nnic	NA	111745411	111748777	Gene ID= novel_gene_chr5_2541 TPM= 2.12 Transcript Type= NA
chr5	111753083	111756310	111753083	111756310	+	transcript2534.chr5.nnic@NA	transcript2534.chr5.nnic	NA	111753083	111756310	Gene ID= novel_gene_chr5_2535 TPM= 9.56 Transcript Type= NA
chr5	112160526	112164276	112160526	112164276	+	ENST00000413221.6@EPB41L4A-AS1	ENST00000413221.6	lincRNA	112160526,112161703,112162151	112161295,112161775,112164276	Gene ID= ENSG00000224032.6 TPM= 8.5 Transcript Type= lincRNA
chr5	112160960	112162306	112160960	112162306	+	transcript2548.chr5.nnic@NA	transcript2548.chr5.nnic	NA	112160960	112162306	Gene ID= novel_gene_chr5_2549 TPM= 3.19 Transcript Type= NA
chr5	112163967	112167138	112163967	112167138	+	transcript2546.chr5.nnic@NA	transcript2546.chr5.nnic	NA	112163967	112167138	Gene ID= novel_gene_chr5_2547 TPM= 6.37 Transcript Type= NA
chr5	112415977	112419765	112415977	112419765	-	transcript2555.chr5.nnic@NA	transcript2555.chr5.nnic	NA	112415977	112419765	Gene ID= novel_gene_chr5_2556 TPM= 2.12 Transcript Type= NA
chr5	112419583	112420978	112419583	112420978	+	ENST00000623705.1@EPB41L4A-AS2	ENST00000623705.1	lincRNA	112419583	112420978	Gene ID= ENSG00000278921.2 TPM= 4.25 Transcript Type= lincRNA
chr5	112840501	112845124	112840501	112845124	+	transcript2559.chr5.nnic@NA	transcript2559.chr5.nnic	NA	112840501	112845124	Gene ID= novel_gene_chr5_2560 TPM= 2.12 Transcript Type= NA
chr5	112861276	112893117	112861276	112893117	+	transcript2577.chr5.nic@AC008575.2	transcript2577.chr5.nic	protein_coding	112861276,112862508,112864457,112891603	112861417,112862583,112864528,112893117	Gene ID= ENSG00000272869.5 TPM= 9.56 Transcript Type= NA
chr5	112861222	112869788	112861222	112869788	+	ENST00000505459.5@SRP19	ENST00000505459.5	protein_coding	112861222,112862508,112864457,112864621,112867404	112861417,112862583,112864528,112864732,112869788	Gene ID= ENSG00000153037.13 TPM= 6.37 Transcript Type= protein_coding
chr5	112861305	112867935	112861305	112867935	+	ENST00000282999.7@SRP19	ENST00000282999.7	protein_coding	112861305,112862508,112864457,112864621,112867372	112861417,112862583,112864528,112864732,112867935	Gene ID= ENSG00000153037.13 TPM= 8.5 Transcript Type= protein_coding
chr5	112876379	112922539	112876379	112922539	-	ENST00000379638.8@REEP5	ENST00000379638.8	protein_coding	112922073,112921163,112902380,112887015,112876379	112922539,112921256,112902518,112887183,112878835	Gene ID= ENSG00000129625.12 TPM= 173.13 Transcript Type= protein_coding
chr5	112884389	112886538	112884389	112886538	-	transcript2581.chr5.nnic@NA	transcript2581.chr5.nnic	NA	112884389	112886538	Gene ID= novel_gene_chr5_2582 TPM= 2.12 Transcript Type= NA
chr5	112976736	113020970	112976736	113020970	+	ENST00000389063.2@DCP2	ENST00000389063.2	protein_coding	112976736,112985835,112992121,112992672,113001084,113001357,113001567,113003942,113007938,113010756,113013321	112976986,112985986,112992248,112992770,113001236,113001469,113001674,113004077,113008042,113010807,113020970	Gene ID= ENSG00000172795.15 TPM= 6.37 Transcript Type= protein_coding
chr5	112976813	112984651	112976813	112984651	+	ENST00000504961.1@DCP2	ENST00000504961.1	protein_coding	112976813,112983974	112976986,112984651	Gene ID= ENSG00000172795.15 TPM= 2.12 Transcript Type= processed_transcript
chr5	113022099	113294976	113022099	113294976	-	transcript2590.chr5.nnic@MCC	transcript2590.chr5.nnic	protein_coding	113294329,113151309,113143218,113122684,113104192,113101739,113085164,113084101,113082860,113071094,113068080,113063984,113053725,113049093,113044456,113043530,113028934,113022099	113294976,113151422,113143360,113122826,113104355,113101945,113085310,113084190,113083008,113071234,113068183,113064167,113053959,113049299,113044521,113043630,113029056,113027482	Gene ID= ENSG00000171444.17 TPM= 2.12 Transcript Type= NA
chr5	113022099	113294949	113022099	113294949	-	ENST00000302475.8@MCC	ENST00000302475.8	protein_coding	113294329,113151309,113143218,113122684,113104192,113101739,113085164,113084101,113082860,113071094,113068080,113063984,113053725,113049093,113043530,113028934,113022099	113294949,113151422,113143360,113122826,113104355,113101945,113085310,113084190,113083008,113071234,113068183,113064167,113053959,113049299,113043630,113029056,113027482	Gene ID= ENSG00000171444.17 TPM= 24.43 Transcript Type= protein_coding
chr5	113513683	113595284	113513683	113595284	+	ENST00000161863.8@YTHDC2	ENST00000161863.8	protein_coding	113513683,113515272,113524981,113526586,113532879,113534305,113535642,113539074,113540968,113542368,113548541,113548955,113553181,113553590,113553767,113553942,113556052,113561080,113563373,113563859,113565893,113567092,113567654,113579586,113581417,113584302,113591041,113591996,113593303,113593482	113514082,113515362,113525177,113526785,113533045,113534407,113535798,113539181,113541116,113542503,113548667,113549020,113553359,113553686,113553854,113554022,113556134,113561185,113563492,113564131,113566019,113567297,113567849,113579695,113581709,113584479,113591244,113592178,113593390,113595284	Gene ID= ENSG00000047188.15 TPM= 3.19 Transcript Type= protein_coding
chr5	113513694	113561196	113513694	113561196	+	ENST00000503857.5@YTHDC2	ENST00000503857.5	protein_coding	113513694,113515272,113532879,113534305,113535642,113539074,113540968,113542368,113548541,113548955,113553181,113553590,113553767,113553942,113556052,113561080	113514082,113515362,113533045,113534407,113535798,113539181,113541116,113542503,113548667,113549020,113553359,113553686,113553854,113554022,113556134,113561196	Gene ID= ENSG00000047188.15 TPM= 3.19 Transcript Type= nonsense_mediated_decay
chr5	113513694	113539911	113513694	113539911	+	transcript2603.chr5.nic@YTHDC2	transcript2603.chr5.nic	protein_coding	113513694,113515272,113532879,113534305,113535642,113539074	113514082,113515362,113533045,113534407,113535798,113539911	Gene ID= ENSG00000047188.15 TPM= 2.12 Transcript Type= NA
chr5	114362388	114363102	114362388	114363102	+	transcript2609.chr5.nnic@NA	transcript2609.chr5.nnic	NA	114362388	114363102	Gene ID= novel_gene_chr5_2610 TPM= 2.12 Transcript Type= NA
chr5	115267188	115296831	115267188	115296831	-	ENST00000379611.9@CCDC112	ENST00000379611.9	protein_coding	115296427,115284787,115279647,115276965,115275994,115275216,115271213,115269703,115268882,115267188	115296831,115284908,115279768,115277054,115276069,115275606,115271626,115269798,115269000,115267918	Gene ID= ENSG00000164221.12 TPM= 3.19 Transcript Type= protein_coding
chr5	115520908	115544894	115520908	115544894	-	ENST00000274457.4@FEM1C	ENST00000274457.4	protein_coding	115544523,115542950,115520908	115544894,115543683,115525617	Gene ID= ENSG00000145780.7 TPM= 33.99 Transcript Type= protein_coding
chr5	115578650	115602479	115578650	115602479	-	ENST00000427199.2@TICAM2	ENST00000427199.2	protein_coding	115602097,115578650	115602479,115581315	Gene ID= ENSG00000243414.5 TPM= 1.06 Transcript Type= protein_coding
chr5	115613508	115626173	115613508	115626173	-	ENST00000456936.3@TMED7	ENST00000456936.3	protein_coding	115625601,115620435,115613508	115626173,115620680,115616445	Gene ID= ENSG00000134970.13 TPM= 76.48 Transcript Type= protein_coding
chr5	115804733	115816954	115804733	115816954	-	ENST00000250535.4@CDO1	ENST00000250535.4	protein_coding	115816228,115813181,115811161,115806349,115804733	115816954,115813258,115811315,115806518,115805462	Gene ID= ENSG00000129596.4 TPM= 2.12 Transcript Type= protein_coding
chr5	115828200	115841858	115828200	115841858	-	ENST00000509910.1@ATG12	ENST00000509910.1	protein_coding	115841390,115837628,115832602,115828200	115841858,115837764,115832664,115831863	Gene ID= ENSG00000145782.12 TPM= 5.31 Transcript Type= protein_coding
chr5	115841904	115913980	115841904	115913980	+	transcript2638.chr5.nnic@AP3S1	transcript2638.chr5.nnic	protein_coding	115841904,115866670,115870017,115895087,115902885,115906821,115913362	115842106,115866761,115870128,115895158,115902992,115906861,115913980	Gene ID= ENSG00000177879.15 TPM= 4.25 Transcript Type= NA
chr5	115841481	115914081	115841481	115914081	+	ENST00000316788.11@AP3S1	ENST00000316788.11	protein_coding	115841481,115866670,115870017,115895087,115902885,115913362	115842106,115866761,115870128,115895158,115902992,115914081	Gene ID= ENSG00000177879.15 TPM= 87.63 Transcript Type= protein_coding
chr5	115841937	115914011	115841937	115914011	+	transcript2650.chr5.nnic@AP3S1	transcript2650.chr5.nnic	protein_coding	115841937,115866670,115870017,115902885,115913362	115842106,115866761,115870128,115902992,115914011	Gene ID= ENSG00000177879.15 TPM= 3.72 Transcript Type= NA
chr5	116085026	116293286	116085026	116293286	+	ENST00000632434.1@COMMD10	ENST00000632434.1	protein_coding	116085026,116087497,116091079,116092545,116134068,116291517,116292451	116085093,116087587,116091189,116092700,116134178,116291576,116293286	Gene ID= ENSG00000145781.8 TPM= 44.61 Transcript Type= protein_coding
chr5	116145137	116147783	116145137	116147783	+	transcript2674.chr5.nnic@NA	transcript2674.chr5.nnic	NA	116145137	116147783	Gene ID= novel_gene_chr5_2675 TPM= 2.12 Transcript Type= NA
chr5	116443616	116574934	116443616	116574934	-	ENST00000343348.10@SEMA6A	ENST00000343348.10	protein_coding	116574185,116504845,116502210,116497327,116496251,116495413,116491740,116488888,116488108,116486749,116482444,116480122,116478542,116478014,116477846,116475545,116473073,116467583,116443616	116574934,116504982,116502327,116497387,116496313,116495514,116491830,116489007,116488196,116486966,116482575,116480277,116478718,116478154,116477926,116475603,116473093,116467747,116447811	Gene ID= ENSG00000092421.16 TPM= 4.25 Transcript Type= protein_coding
chr5	118839697	118988553	118839697	118988553	-	transcript2695.chr5.nnic@DTWD2	transcript2695.chr5.nnic	protein_coding	118988294,118944559,118939196,118928537,118926979,118848090,118839697	118988553,118944649,118939290,118928729,118927038,118848218,118841087	Gene ID= ENSG00000169570.9 TPM= 2.12 Transcript Type= NA
chr5	118839541	118988545	118839541	118988545	-	ENST00000510708.5@DTWD2	ENST00000510708.5	protein_coding	118988294,118944559,118939196,118928537,118848090,118839541	118988545,118944649,118939290,118928729,118848218,118841087	Gene ID= ENSG00000169570.9 TPM= 2.12 Transcript Type= protein_coding
chr5	118973796	118974122	118973796	118974122	+	ENST00000397627.3@PTMAP2	ENST00000397627.3	processed_pseudogene	118973796	118974122	Gene ID= ENSG00000197744.5 TPM= 1.06 Transcript Type= processed_pseudogene
chr5	119071058	119129332	119071058	119129332	+	transcript2705.chr5.nic@DMXL1	transcript2705.chr5.nic	protein_coding	119071058,119097979,119101935,119105180,119110151,119114475,119116158,119118815,119120971,119129211	119071656,119098104,119102006,119105258,119110283,119114541,119116336,119119004,119121139,119129332	Gene ID= ENSG00000172869.14 TPM= 3.19 Transcript Type= NA
chr5	119071490	119249127	119071490	119249127	+	ENST00000311085.8@DMXL1	ENST00000311085.8	protein_coding	119071490,119097979,119101935,119105180,119110151,119114475,119116158,119118815,119120971,119129211,119133132,119133494,119134268,119143841,119144536,119146837,119147249,119148739,119151929,119164507,119165183,119166616,119167603,119170190,119171778,119175261,119177357,119177996,119189708,119193828,119196371,119197755,119203319,119216901,119220472,119220940,119224709,119233340,119237322,119238989,119240419,119244359,119246995	119071656,119098104,119102006,119105258,119110283,119114541,119116336,119119004,119121139,119129423,119133385,119134178,119134389,119143930,119144638,119146956,119147470,119150421,119152036,119164676,119165280,119166781,119167864,119171280,119171969,119175337,119177484,119178244,119189886,119193970,119196456,119197956,119203436,119216987,119220593,119221081,119224769,119233467,119237414,119239080,119240471,119244576,119249127	Gene ID= ENSG00000172869.14 TPM= 3.19 Transcript Type= protein_coding
chr5	119354314	119399688	119354314	119399688	+	ENST00000504771.2@TNFAIP8	ENST00000504771.2	protein_coding	119354314,119392816	119356121,119399688	Gene ID= ENSG00000145779.7 TPM= 1.06 Transcript Type= protein_coding
chr5	119452494	119542332	119452494	119542332	+	transcript2711.chr5.nnic@HSD17B4	transcript2711.chr5.nnic	protein_coding	119452494,119456315,119473908,119474401,119475706,119475824,119477417,119478834,119489192,119492100,119493818,119496543,119499317,119502041,119506818,119509141,119514981,119525216,119525917,119527133,119529894,119531266,119536423,119541102,119541905	119452633,119456368,119474015,119474460,119475727,119475870,119477501,119479021,119489283,119492124,119493946,119496646,119499553,119502092,119506889,119509244,119515046,119525285,119526023,119527219,119529980,119531404,119536550,119541153,119542332	Gene ID= ENSG00000133835.14 TPM= 9.91 Transcript Type= NA
chr5	119452733	119542252	119452733	119542252	+	transcript2716.chr5.nic@HSD17B4	transcript2716.chr5.nic	protein_coding	119452733,119456315,119473908,119474401,119475706,119475824,119477417,119478834,119489192,119492100,119493818,119496543,119499317,119502041,119506818,119509141,119514981,119525216,119525917,119527133,119529894,119531266,119536423,119541905	119452821,119456368,119474015,119474460,119475727,119475870,119477501,119479021,119489283,119492124,119493946,119496646,119499553,119502092,119506889,119509244,119515046,119525285,119526023,119527219,119529980,119531404,119536550,119542252	Gene ID= ENSG00000133835.14 TPM= 5.31 Transcript Type= NA
chr5	119452443	119542333	119452443	119542333	+	ENST00000256216.10@HSD17B4	ENST00000256216.10	protein_coding	119452443,119456315,119473908,119474401,119475706,119475824,119477417,119478834,119489192,119492100,119493818,119496543,119499317,119502041,119506818,119509141,119514981,119525216,119525917,119527133,119529894,119531266,119536423,119541905	119452633,119456368,119474015,119474460,119475727,119475870,119477501,119479021,119489283,119492124,119493946,119496646,119499553,119502092,119506889,119509244,119515046,119525285,119526023,119527219,119529980,119531404,119536550,119542333	Gene ID= ENSG00000133835.14 TPM= 69.92 Transcript Type= protein_coding
chr5	119452753	119542332	119452753	119542332	+	ENST00000414835.6@HSD17B4	ENST00000414835.6	protein_coding	119452753,119456315,119473908,119474401,119475706,119475824,119477417,119478834,119489192,119492100,119493818,119496543,119499317,119502041,119506818,119509141,119514981,119525216,119525917,119527133,119529894,119531266,119536423,119541905	119452821,119456368,119474015,119474460,119475727,119475870,119477492,119479021,119489283,119492124,119493946,119496646,119499553,119502092,119506889,119509244,119515046,119525285,119526023,119527219,119529980,119531404,119536550,119542332	Gene ID= ENSG00000133835.14 TPM= 6.19 Transcript Type= protein_coding
chr5	120464245	120687302	120464245	120687302	+	transcript2725.chr5.nnic@PRR16	transcript2725.chr5.nnic	protein_coding	120464245,120617095,120618442,120685954	120464645,120617192,120618565,120687302	Gene ID= ENSG00000184838.14 TPM= 21.24 Transcript Type= NA
chr5	120493467	120493707	120493467	120493707	-	transcript2727.chr5.nnic@NA	transcript2727.chr5.nnic	NA	120493467	120493707	Gene ID= novel_gene_chr5_2728 TPM= 2.12 Transcript Type= NA
chr5	121961961	122028619	121961961	122028619	+	ENST00000339397.4@SRFBP1	ENST00000339397.4	protein_coding	121961961,121974196,121975315,121994599,122019260,122020088,122022370,122026942	121962068,121974284,121975387,121994670,122019341,122020802,122022407,122028619	Gene ID= ENSG00000151304.5 TPM= 3.19 Transcript Type= protein_coding
chr5	121961966	121963916	121961966	121963916	+	transcript2736.chr5.nnic@NA	transcript2736.chr5.nnic	NA	121961966	121963916	Gene ID= novel_gene_chr5_2737 TPM= 3.19 Transcript Type= NA
chr5	122775203	122829755	122775203	122829755	+	ENST00000514949.1@SNX2	ENST00000514949.1	protein_coding	122775203,122795266,122799692,122801869,122802081,122803472,122808277,122815896,122816915,122817280,122818818,122826050,122827379,122827575,122829598	122775762,122795383,122799855,122801935,122802124,122803613,122808355,122815971,122817028,122817373,122819023,122826193,122827459,122827646,122829755	Gene ID= ENSG00000205302.6 TPM= 1.06 Transcript Type= protein_coding
chr5	122774996	122830108	122774996	122830108	+	ENST00000379516.6@SNX2	ENST00000379516.6	protein_coding	122774996,122795266,122799692,122801869,122802081,122803472,122808277,122815896,122816915,122817280,122818818,122826050,122827379,122827575,122829598	122775211,122795383,122799855,122801935,122802124,122803613,122808355,122815971,122817028,122817373,122819023,122826193,122827459,122827646,122830108	Gene ID= ENSG00000205302.6 TPM= 38.24 Transcript Type= protein_coding
chr5	122845449	123009212	122845449	123009212	+	ENST00000261369.8@SNX24	ENST00000261369.8	protein_coding	122845449,122936734,122946055,122999912,123001405,123001940,123007682	122845693,122936817,122946159,123000006,123001437,123002004,123009212	Gene ID= ENSG00000064652.10 TPM= 4.25 Transcript Type= protein_coding
chr5	122845626	123002142	122845626	123002142	+	ENST00000506996.5@SNX24	ENST00000506996.5	protein_coding	122845626,122936734,122946055,122999912,123001405,123001940	122845693,122936817,122946159,123000006,123001437,123002142	Gene ID= ENSG00000064652.10 TPM= 1.06 Transcript Type= protein_coding
chr5	123023250	123036741	123023250	123036741	-	ENST00000306442.4@PPIC	ENST00000306442.4	protein_coding	123036509,123029305,123028775,123025784,123023250	123036741,123029418,123028868,123025968,123024003	Gene ID= ENSG00000168938.5 TPM= 1.06 Transcript Type= protein_coding
chr5	123023387	123036737	123023387	123036737	-	transcript2772.chr5.nic@PPIC	transcript2772.chr5.nic	protein_coding	123036509,123028775,123025784,123023387	123036737,123029418,123025968,123024003	Gene ID= ENSG00000168938.5 TPM= 3.19 Transcript Type= NA
chr5	123344885	123423303	123344885	123423303	-	ENST00000306467.9@CEP120	ENST00000306467.9	protein_coding	123422950,123418359,123416010,123412399,123399136,123393300,123391110,123389924,123388432,123386518,123384951,123382986,123382737,123382111,123378336,123377374,123372650,123364496,123349944,123344885	123423303,123418515,123416124,123412540,123399284,123393497,123391337,123390140,123388606,123386667,123385133,123383082,123382889,123382200,123378428,123377535,123372772,123364594,123350089,123346753	Gene ID= ENSG00000168944.15 TPM= 4.25 Transcript Type= protein_coding
chr5	123511181	123512635	123511181	123512635	-	transcript2802.chr5.nnic@NA	transcript2802.chr5.nnic	NA	123511181	123512635	Gene ID= novel_gene_chr5_2803 TPM= 3.19 Transcript Type= NA
chr5	123512093	123616752	123512093	123616752	+	transcript2791.chr5.nic@CSNK1G3	transcript2791.chr5.nic	protein_coding	123512093,123545417,123553107,123557495,123573393,123575729,123588068,123588427,123590410,123591319,123595039,123604724,123605339,123614342	123512570,123545841,123553147,123557564,123573541,123575963,123588153,123588511,123590558,123591414,123595134,123604830,123605362,123616752	Gene ID= ENSG00000151292.17 TPM= 2.12 Transcript Type= NA
chr5	123512254	123616752	123512254	123616752	+	transcript2797.chr5.nic@CSNK1G3	transcript2797.chr5.nic	protein_coding	123512254,123545417,123553107,123557495,123573393,123575729,123588068,123588427,123590410,123591319,123604724,123605339,123614342	123512570,123545841,123553147,123557564,123573541,123575963,123588153,123588511,123590558,123591414,123604830,123605362,123616752	Gene ID= ENSG00000151292.17 TPM= 3.19 Transcript Type= NA
chr5	124636917	124745425	124636917	124745425	-	ENST00000306315.9@ZNF608	ENST00000306315.9	protein_coding	124744084,124701014,124649610,124646679,124644244,124643511,124641252,124639133,124636917	124745425,124701269,124649697,124649133,124644661,124643683,124641405,124639214,124637906	Gene ID= ENSG00000168916.15 TPM= 2.12 Transcript Type= protein_coding
chr5	126423359	126496930	126423359	126496930	+	transcript2809.chr5.nnic@GRAMD2B	transcript2809.chr5.nnic	protein_coding	126423359,126465426,126466294,126469677,126472238,126473265,126477692,126480456,126480627,126483463,126484402,126485686,126486873,126488799,126493490,126496269	126423689,126465545,126466336,126469788,126472304,126473368,126477787,126480527,126480707,126483574,126484524,126485773,126486977,126488892,126493567,126496930	Gene ID= ENSG00000155324.9 TPM= 2.12 Transcript Type= NA
chr5	126423177	126494161	126423177	126494161	+	ENST00000542322.5@GRAMD2B	ENST00000542322.5	protein_coding	126423177,126465426,126466294,126469677,126472238,126473265,126477692,126480456,126480627,126483463,126484402,126485686,126486873,126488799,126492915	126423689,126465545,126466336,126469788,126472304,126473368,126477787,126480527,126480707,126483574,126484524,126485773,126486977,126488892,126494161	Gene ID= ENSG00000155324.9 TPM= 1.06 Transcript Type= protein_coding
chr5	126423419	126496930	126423419	126496930	+	transcript2820.chr5.nnic@GRAMD2B	transcript2820.chr5.nnic	protein_coding	126423419,126465377,126469677,126472238,126473265,126477692,126480456,126480627,126483463,126484402,126485686,126486873,126488799,126493490,126496269	126423689,126465545,126469788,126472304,126473368,126477787,126480527,126480707,126483574,126484524,126485773,126486977,126488892,126493567,126496930	Gene ID= ENSG00000155324.9 TPM= 2.12 Transcript Type= NA
chr5	126423146	126494371	126423146	126494371	+	ENST00000515200.5@GRAMD2B	ENST00000515200.5	protein_coding	126423146,126465426,126466294,126472238,126473265,126477692,126480456,126480627,126483463,126484399,126485686,126486873,126488799,126492915	126423689,126465545,126466336,126472304,126473368,126477787,126480527,126480707,126483574,126484524,126485773,126486977,126488892,126494371	Gene ID= ENSG00000155324.9 TPM= 1.06 Transcript Type= protein_coding
chr5	126423146	126494371	126423146	126494371	+	ENST00000285689.7@GRAMD2B	ENST00000285689.7	protein_coding	126423146,126465426,126469677,126472238,126473265,126477692,126480456,126480627,126483463,126484402,126485686,126486873,126488799,126492915	126423689,126465545,126469788,126472304,126473368,126477787,126480527,126480707,126483574,126484524,126485773,126486977,126488892,126494371	Gene ID= ENSG00000155324.9 TPM= 11.68 Transcript Type= protein_coding
chr5	126496279	126498604	126496279	126498604	+	ENST00000624769.1@AC093535.2	ENST00000624769.1	TEC	126496279	126498604	Gene ID= ENSG00000279118.1 TPM= 13.81 Transcript Type= TEC
chr5	126541841	126595418	126541841	126595418	-	ENST00000409134.7@ALDH7A1	ENST00000409134.7	protein_coding	126595007,126593351,126592664,126583932,126582851,126577079,126575420,126570782,126568259,126561083,126559240,126555931,126554287,126552021,126550196,126549929,126546324,126541841	126595418,126593404,126592729,126584012,126582974,126577211,126575464,126570859,126568356,126561124,126559334,126556015,126554393,126552137,126550293,126550002,126546399,126545019	Gene ID= ENSG00000164904.17 TPM= 1.06 Transcript Type= protein_coding
chr5	126600920	126626239	126600920	126626239	+	transcript2839.chr5.nnic@PHAX	transcript2839.chr5.nnic	protein_coding	126600920,126603570,126608364,126617250,126624575,126625754	126601058,126604183,126608484,126617333,126625526,126626239	Gene ID= ENSG00000164902.13 TPM= 2.66 Transcript Type= NA
chr5	126600268	126627252	126600268	126627252	+	ENST00000297540.4@PHAX	ENST00000297540.4	protein_coding	126600268,126603570,126608364,126617250,126624575	126601058,126604183,126608484,126617333,126627252	Gene ID= ENSG00000164902.13 TPM= 5.31 Transcript Type= protein_coding
chr5	126864087	126866897	126864087	126866897	+	transcript2849.chr5.nnic@NA	transcript2849.chr5.nnic	NA	126864087	126866897	Gene ID= novel_gene_chr5_2850 TPM= 2.12 Transcript Type= NA
chr5	126867714	127030808	126867714	127030808	-	ENST00000308660.5@MARCH3	ENST00000308660.5	protein_coding	127030350,126917984,126914930,126878185,126867714	127030808,126918227,126915134,126878394,126870791	Gene ID= ENSG00000173926.5 TPM= 33.99 Transcript Type= protein_coding
chr5	126913977	127030563	126913977	127030563	-	transcript2858.chr5.nic@MARCH3	transcript2858.chr5.nic	protein_coding	127030350,126917984,126913977	127030563,126918227,126915134	Gene ID= ENSG00000173926.5 TPM= 3.19 Transcript Type= NA
chr5	126870191	126878397	126870191	126878397	-	ENST00000506088.1@MARCH3	ENST00000506088.1	protein_coding	126878185,126870191	126878397,126870791	Gene ID= ENSG00000173926.5 TPM= 1.06 Transcript Type= retained_intron
chr5	127028564	127030588	127028564	127030588	-	transcript2859.chr5.nnic@NA	transcript2859.chr5.nnic	NA	127028564	127030588	Gene ID= novel_gene_chr5_2860 TPM= 8.5 Transcript Type= NA
chr5	127044770	127073511	127044770	127073511	-	transcript2863.chr5.nnic@C5orf63	transcript2863.chr5.nnic	protein_coding	127073451,127071584,127058882,127056397,127052613,127047613,127044770	127073511,127071685,127059002,127056506,127052669,127047915,127047520	Gene ID= ENSG00000164241.13 TPM= 4.25 Transcript Type= NA
chr5	127051614	127073481	127051614	127073481	-	transcript2870.chr5.nic@C5orf63	transcript2870.chr5.nic	protein_coding	127073451,127071584,127058882,127056397,127052613,127051614	127073481,127071685,127059002,127056506,127052669,127051947	Gene ID= ENSG00000164241.13 TPM= 2.12 Transcript Type= NA
chr5	127051304	127073492	127051304	127073492	-	ENST00000296662.9@C5orf63	ENST00000296662.9	protein_coding	127073451,127071584,127058882,127052613,127051304	127073492,127071685,127059002,127052669,127051947	Gene ID= ENSG00000164241.13 TPM= 1.06 Transcript Type= protein_coding
chr5	127517609	127555089	127517609	127555089	+	ENST00000296666.12@PRRC1	ENST00000296666.12	protein_coding	127517609,127523460,127524531,127526618,127530294,127533623,127539040,127547819,127551707	127517776,127523582,127524920,127526778,127530396,127533786,127539143,127547921,127555089	Gene ID= ENSG00000164244.20 TPM= 28.68 Transcript Type= protein_coding
chr5	127517651	127552151	127517651	127552151	+	ENST00000442138.6@PRRC1	ENST00000442138.6	protein_coding	127517651,127523460,127524531,127526618,127530294,127533623,127539040,127547819	127517776,127523582,127524920,127526778,127530396,127533786,127539143,127552151	Gene ID= ENSG00000164244.20 TPM= 2.12 Transcript Type= protein_coding
chr5	127966456	128083109	127966456	128083109	-	transcript2892.chr5.nic@LINC01184	transcript2892.chr5.nic	lincRNA	128082735,128061144,127966456	128083109,128061244,127966928	Gene ID= ENSG00000245937.7 TPM= 2.12 Transcript Type= NA
chr5	127940426	128083100	127940426	128083100	-	ENST00000499346.6@LINC01184	ENST00000499346.6	lincRNA	128082735,128061144,127956804,127940426	128083100,128061244,127956921,127941220	Gene ID= ENSG00000245937.7 TPM= 3.19 Transcript Type= lincRNA
chr5	128328299	128537821	128328299	128537821	-	ENST00000508989.5@FBN2	ENST00000508989.5	protein_coding	128537350,128536402,128527872,128519273,128464724,128446481,128408674,128395122,128393135,128392018,128378771,128377752,128376731,128374628,128369182,128366377,128364600,128361723,128357276,128350868,128349955,128349347,128345357,128344385,128338933,128337997,128335988,128335455,128335170,128334719,128332912,128330573,128328299	128537821,128536484,128527967,128519368,128464921,128446606,128408799,128395274,128393368,128392155,128378890,128377877,128376853,128374750,128369334,128366430,128364725,128361848,128357395,128351005,128350005,128349472,128345584,128344510,128339061,128338122,128336113,128335577,128335295,128334844,128333034,128330695,128328821	Gene ID= ENSG00000138829.11 TPM= 1.06 Transcript Type= protein_coding
chr5	128965065	129033631	128965065	129033631	+	transcript2904.chr5.nnic@SLC27A6	transcript2904.chr5.nnic	protein_coding	128965065,128965978,128985133,128988600,128990340,129015885,129023620,129027133,129028345,129029577,129033106	128965692,128966618,128985336,128988758,128990464,129016079,129023710,129027331,129028442,129029707,129033631	Gene ID= ENSG00000113396.12 TPM= 20.3 Transcript Type= NA
chr5	128965487	129033631	128965487	129033631	+	transcript2908.chr5.nnic@SLC27A6	transcript2908.chr5.nnic	protein_coding	128965487,128965978,128985133,128988600,128990340,129015885,129023620,129027133,129028345,129029577,129033106	128965547,128966618,128985336,128988758,128990464,129016079,129023710,129027331,129028442,129029707,129033631	Gene ID= ENSG00000113396.12 TPM= 6.49 Transcript Type= NA
chr5	128965497	129033631	128965497	129033631	+	transcript2909.chr5.nnic@SLC27A6	transcript2909.chr5.nnic	protein_coding	128965497,128965874,128985133,128988600,128990340,129015885,129023620,129027133,129028345,129029577,129033106	128965692,128966618,128985336,128988758,128990464,129016079,129023710,129027331,129028442,129029707,129033631	Gene ID= ENSG00000113396.12 TPM= 7.55 Transcript Type= NA
chr5	128965517	129033642	128965517	129033642	+	ENST00000395266.5@SLC27A6	ENST00000395266.5	protein_coding	128965517,128965978,128985133,128988600,128990340,129015885,129023620,129027133,129028345,129029577,129033106	128965752,128966618,128985336,128988758,128990464,129016079,129023710,129027331,129028442,129029707,129033642	Gene ID= ENSG00000113396.12 TPM= 8.48 Transcript Type= protein_coding
chr5	128965128	129033631	128965128	129033631	+	ENST00000262462.8@SLC27A6	ENST00000262462.8	protein_coding	128965128,128985133,128988600,128990340,129015885,129023620,129027133,129028345,129029577,129033106	128966618,128985336,128988758,128990464,129016079,129023710,129027331,129028442,129029707,129033631	Gene ID= ENSG00000113396.12 TPM= 68.1 Transcript Type= protein_coding
chr5	128965363	129033631	128965363	129033631	+	transcript2918.chr5.nnic@SLC27A6	transcript2918.chr5.nnic	protein_coding	128965363,128988600,128990340,129015885,129023620,129027133,129028345,129029577,129033106	128966618,128988758,128990464,129016079,129023710,129027331,129028442,129029707,129033631	Gene ID= ENSG00000113396.12 TPM= 3.91 Transcript Type= NA
chr5	128965528	129033282	128965528	129033282	+	ENST00000506176.1@SLC27A6	ENST00000506176.1	protein_coding	128965528,128965874,128985133,128988600,128990340,129015885,129023620,129027133,129028345,129029577,129033106	128965697,128966618,128985336,128988758,128990464,129016079,129023710,129027331,129028442,129029707,129033282	Gene ID= ENSG00000113396.12 TPM= 1.06 Transcript Type= protein_coding
chr5	129094751	129114028	129094751	129114028	+	ENST00000173527.5@ISOC1	ENST00000173527.5	protein_coding	129094751,129104956,129105185,129106946,129112855	129095075,129105075,129105388,129107062,129114028	Gene ID= ENSG00000066583.11 TPM= 213.49 Transcript Type= protein_coding
chr5	130345567	130349841	130345567	130349841	+	transcript2933.chr5.nnic@NA	transcript2933.chr5.nnic	NA	130345567	130349841	Gene ID= novel_gene_chr5_2934 TPM= 2.12 Transcript Type= NA
chr5	131159335	131165333	131159335	131165333	-	ENST00000513345.5@HINT1	ENST00000513345.5	protein_coding	131165060,131162572,131159335	131165333,131162676,131159611	Gene ID= ENSG00000169567.11 TPM= 6.37 Transcript Type= nonsense_mediated_decay
chr5	131159027	131165485	131159027	131165485	-	ENST00000304043.9@HINT1	ENST00000304043.9	protein_coding	131165095,131162572,131159027	131165485,131162676,131159611	Gene ID= ENSG00000169567.11 TPM= 175.26 Transcript Type= protein_coding
chr5	131170810	131205426	131170810	131205426	+	ENST00000379380.8@LYRM7	ENST00000379380.8	protein_coding	131170810,131180095,131182229,131187028,131199531	131171038,131180167,131182299,131187109,131205426	Gene ID= ENSG00000186687.15 TPM= 7.44 Transcript Type= protein_coding
chr5	131264019	131394667	131264019	131394667	+	transcript2947.chr5.nnic@CDC42SE2	transcript2947.chr5.nnic	protein_coding	131264019,131315976,131359209,131385543,131390993,131391829	131264166,131316144,131359547,131385644,131391108,131394667	Gene ID= ENSG00000158985.13 TPM= 12.75 Transcript Type= NA
chr5	131264068	131393106	131264068	131393106	+	ENST00000503291.5@CDC42SE2	ENST00000503291.5	protein_coding	131264068,131315976,131359209,131385543,131390993,131391918	131264166,131316144,131359558,131385644,131391108,131393106	Gene ID= ENSG00000158985.13 TPM= 2.12 Transcript Type= protein_coding
chr5	131641715	131797063	131641715	131797063	-	ENST00000615660.4@FNIP1	ENST00000615660.4	protein_coding	131796830,131744564,131730904,131719317,131718986,131716565,131710578,131709201,131706411,131704065,131698917,131679029,131677703,131672686,131671505,131670463,131651802,131647090,131641715	131797063,131744690,131731038,131719417,131719060,131716656,131710661,131709272,131706546,131704266,131699002,131679175,131677872,131672924,131672661,131670631,131651999,131647205,131644763	Gene ID= ENSG00000217128.11 TPM= 11.68 Transcript Type= protein_coding
chr5	131715589	131797020	131715589	131797020	-	transcript2961.chr5.nnic@FNIP1	transcript2961.chr5.nnic	protein_coding	131796830,131744564,131730904,131719317,131718986,131716565,131715589	131797020,131744690,131731038,131719417,131719060,131716656,131715993	Gene ID= ENSG00000217128.11 TPM= 9.56 Transcript Type= NA
chr5	131795608	131796980	131795608	131796980	-	ENST00000623690.1@FNIP1	ENST00000623690.1	protein_coding	131795608	131796980	Gene ID= ENSG00000217128.11 TPM= 2.12 Transcript Type= TEC
chr5	131785757	131788714	131785757	131788714	+	transcript2962.chr5.nnic@NA	transcript2962.chr5.nnic	NA	131785757	131788714	Gene ID= novel_gene_chr5_2963 TPM= 9.56 Transcript Type= NA
chr5	131949973	132011662	131949973	132011662	-	ENST00000379264.6@ACSL6	ENST00000379264.6	protein_coding	132011505,131994031,131990853,131990100,131989407,131988805,131988048,131986822,131985407,131976648,131974893,131973266,131972724,131971550,131970128,131967940,131966416,131962535,131960520,131959536,131949973	132011662,131994251,131990967,131990164,131989508,131988904,131988226,131986854,131985458,131976721,131974970,131973400,131972858,131971645,131970200,131968028,131966532,131962678,131960621,131959607,131954371	Gene ID= ENSG00000164398.12 TPM= 2.12 Transcript Type= protein_coding
chr5	131953902	131975370	131953902	131975370	-	transcript2967.chr5.nic@ACSL6	transcript2967.chr5.nic	protein_coding	131974893,131973266,131972724,131971550,131970128,131967940,131966416,131962535,131960520,131959536,131953902	131975370,131973400,131972858,131971645,131970200,131968028,131966532,131962678,131960621,131959607,131954371	Gene ID= ENSG00000164398.12 TPM= 2.12 Transcript Type= NA
chr5	131953902	132011613	131953902	132011613	-	ENST00000296869.8@ACSL6	ENST00000296869.8	protein_coding	132011505,131994031,131990853,131990100,131989407,131988805,131988048,131986822,131985407,131976648,131974758,131973266,131972724,131971550,131970128,131967940,131966416,131962535,131960520,131959536,131953902	132011613,131994251,131990967,131990164,131989508,131988904,131988226,131986854,131985458,131976721,131974835,131973400,131972858,131971645,131970200,131968028,131966532,131962678,131960621,131959607,131954371	Gene ID= ENSG00000164398.12 TPM= 1.06 Transcript Type= protein_coding
chr5	132190146	132193081	132190146	132193081	-	transcript2997.chr5.nnic@NA	transcript2997.chr5.nnic	NA	132190146	132193081	Gene ID= novel_gene_chr5_2998 TPM= 3.19 Transcript Type= NA
chr5	132192610	132227877	132192610	132227877	-	transcript2976.chr5.nic@P4HA2	transcript2976.chr5.nic	protein_coding	132227790,132227086,132218545,132217752,132217197,132213916,132210284,132209138,132207708,132204082,132203748,132198879,132198321,132195412,132194926,132192610	132227877,132227221,132218644,132217848,132217348,132214053,132210523,132209331,132207884,132204152,132203847,132198932,132198380,132195480,132195022,132193080	Gene ID= ENSG00000072682.18 TPM= 25.62 Transcript Type= NA
chr5	132192610	132227899	132192610	132227899	-	transcript2984.chr5.nic@P4HA2	transcript2984.chr5.nic	protein_coding	132227790,132218545,132217752,132217197,132213916,132210284,132209138,132207708,132204082,132203748,132198879,132198206,132195412,132194926,132192610	132227899,132218644,132217848,132217348,132214053,132210523,132209331,132207884,132204152,132203847,132198932,132198271,132195480,132195022,132193080	Gene ID= ENSG00000072682.18 TPM= 23.49 Transcript Type= NA
chr5	132192610	132228082	132192610	132228082	-	ENST00000360568.7@P4HA2	ENST00000360568.7	protein_coding	132227790,132218545,132217752,132217197,132213916,132210284,132209138,132207708,132204082,132203748,132198879,132198321,132195412,132194926,132192610	132228082,132218644,132217848,132217348,132214053,132210523,132209331,132207884,132204152,132203847,132198932,132198380,132195480,132195022,132193080	Gene ID= ENSG00000072682.18 TPM= 60.68 Transcript Type= protein_coding
chr5	132192610	132227819	132192610	132227819	-	ENST00000379086.5@P4HA2	ENST00000379086.5	protein_coding	132227790,132227086,132218545,132217752,132217197,132213916,132210284,132209138,132207708,132204082,132203748,132198879,132198321,132195412,132194926,132192610	132227819,132227258,132218644,132217848,132217348,132214053,132210523,132209331,132207884,132204152,132203847,132198932,132198380,132195480,132195022,132193080	Gene ID= ENSG00000072682.18 TPM= 11.81 Transcript Type= protein_coding
chr5	132192610	132227857	132192610	132227857	-	ENST00000166534.8@P4HA2	ENST00000166534.8	protein_coding	132227790,132227086,132218545,132217752,132217197,132213916,132210284,132209138,132207708,132204082,132203748,132198879,132198206,132195412,132194926,132192610	132227857,132227221,132218644,132217848,132217348,132214053,132210523,132209331,132207884,132204152,132203847,132198932,132198271,132195480,132195022,132193080	Gene ID= ENSG00000072682.18 TPM= 12.88 Transcript Type= protein_coding
chr5	132220075	132225067	132220075	132225067	+	transcript2995.chr5.nnic@NA	transcript2995.chr5.nnic	NA	132220075	132225067	Gene ID= novel_gene_chr5_2996 TPM= 5.31 Transcript Type= NA
chr5	132294443	132344206	132294443	132344206	+	ENST00000200652.3@SLC22A4	ENST00000200652.3	protein_coding	132294443,132312161,132313614,132322184,132327277,132331756,132334718,132335818,132340565,132343760	132295009,132312264,132313768,132322355,132327403,132331850,132334932,132336000,132340700,132344206	Gene ID= ENSG00000197208.5 TPM= 1.06 Transcript Type= protein_coding
chr5	132369752	132395614	132369752	132395614	+	ENST00000245407.7@SLC22A5	ENST00000245407.7	protein_coding	132369752,132378378,132384147,132385328,132387025,132388921,132390690,132392433,132393676,132394185	132370365,132378481,132384301,132385499,132387151,132389021,132390904,132392615,132393811,132395614	Gene ID= ENSG00000197375.12 TPM= 8.5 Transcript Type= protein_coding
chr5	132410636	132476044	132410636	132476044	+	ENST00000378953.8@C5orf56	ENST00000378953.8	protein_coding	132410636,132419823,132449650,132475667	132411041,132419940,132449689,132476044	Gene ID= ENSG00000197536.11 TPM= 7.44 Transcript Type= protein_coding
chr5	132424390	132427459	132424390	132427459	-	transcript3036.chr5.nnic@NA	transcript3036.chr5.nnic	NA	132424390	132427459	Gene ID= novel_gene_chr5_3037 TPM= 14.87 Transcript Type= NA
chr5	132433780	132434215	132433780	132434215	-	transcript3038.chr5.nnic@NA	transcript3038.chr5.nnic	NA	132433780	132434215	Gene ID= novel_gene_chr5_3039 TPM= 2.12 Transcript Type= NA
chr5	132447835	132449065	132447835	132449065	-	transcript3040.chr5.nnic@NA	transcript3040.chr5.nnic	NA	132447835	132449065	Gene ID= novel_gene_chr5_3041 TPM= 2.12 Transcript Type= NA
chr5	132454914	132458141	132454914	132458141	+	transcript3032.chr5.nnic@NA	transcript3032.chr5.nnic	NA	132454914	132458141	Gene ID= novel_gene_chr5_3033 TPM= 4.25 Transcript Type= NA
chr5	132473043	132476039	132473043	132476039	+	transcript3034.chr5.nnic@NA	transcript3034.chr5.nnic	NA	132473043	132476039	Gene ID= novel_gene_chr5_3035 TPM= 4.25 Transcript Type= NA
chr5	132481609	132490798	132481609	132490798	-	ENST00000245414.8@IRF1	ENST00000245414.8	protein_coding	132490545,132489392,132487926,132486954,132486795,132486557,132486251,132485667,132484362,132481609	132490798,132489483,132488025,132487130,132486844,132486686,132486373,132485716,132484497,132484075	Gene ID= ENSG00000125347.13 TPM= 8.5 Transcript Type= protein_coding
chr5	132556938	132646344	132556938	132646344	+	ENST00000378823.7@RAD50	ENST00000378823.7	protein_coding	132556938,132559284,132575777,132579317,132579862,132587562,132587924,132588687,132589631,132591224,132591877,132594869,132595573,132603300,132603920,132604806,132608615,132609117,132609283,132616003,132618070,132637115,132638081,132640672,132642178	132557453,132559367,132575928,132579502,132580066,132587690,132588089,132588880,132589837,132591406,132592034,132595044,132595810,132603489,132604046,132604999,132608725,132609209,132609396,132616130,132618294,132637200,132638223,132640805,132646344	Gene ID= ENSG00000113522.13 TPM= 2.12 Transcript Type= protein_coding
chr5	132556938	132642476	132556938	132642476	+	ENST00000533482.5@RAD50	ENST00000533482.5	protein_coding	132556938,132559284,132575777,132579317,132579862,132587562,132587924,132588687,132589631,132591224,132591877,132594869,132595573,132603300,132603920,132604806,132608615,132609117,132609283,132616003,132618070,132637115,132638081,132640672,132642178	132557453,132559367,132575863,132579502,132580066,132587690,132588089,132588880,132589837,132591406,132592034,132595044,132595810,132603489,132604046,132604999,132608725,132609209,132609396,132616130,132618294,132637200,132638223,132640805,132642476	Gene ID= ENSG00000113522.13 TPM= 1.06 Transcript Type= nonsense_mediated_decay
chr5	132556952	132593180	132556952	132593180	+	transcript3018.chr5.nic@RAD50	transcript3018.chr5.nic	protein_coding	132556952,132559284,132575777,132579317,132579862,132587562,132587924,132588687,132589631,132591224,132591877,132592764	132557453,132559367,132575928,132579502,132580066,132587690,132588089,132588880,132589837,132591406,132592034,132593180	Gene ID= ENSG00000113522.13 TPM= 2.12 Transcript Type= NA
chr5	132643732	132644620	132643732	132644620	+	transcript3043.chr5.nnic@NA	transcript3043.chr5.nnic	NA	132643732	132644620	Gene ID= novel_gene_chr5_3044 TPM= 3.19 Transcript Type= NA
chr5	132689343	132737578	132689343	132737578	-	transcript3045.chr5.nnic@KIF3A	transcript3045.chr5.nnic	protein_coding	132737414,132734205,132726354,132726128,132720609,132716845,132716245,132715757,132710959,132708907,132706451,132703463,132702885,132702558,132702087,132700647,132700216,132699171,132689343	132737578,132734478,132726498,132726212,132720714,132716984,132716442,132715931,132711057,132708978,132706459,132703619,132703065,132702668,132702212,132700700,132700284,132699295,132689732	Gene ID= ENSG00000131437.15 TPM= 2.12 Transcript Type= NA
chr5	132692628	132737638	132692628	132737638	-	ENST00000378746.8@KIF3A	ENST00000378746.8	protein_coding	132737414,132734205,132726354,132726128,132720609,132716845,132716245,132715757,132710959,132703463,132702885,132702558,132702087,132700647,132700216,132699171,132692628	132737638,132734478,132726498,132726212,132720714,132716984,132716442,132715931,132711057,132703619,132703065,132702668,132702212,132700700,132700284,132699295,132696682	Gene ID= ENSG00000131437.15 TPM= 5.31 Transcript Type= protein_coding
chr5	132756001	132777421	132756001	132777421	-	ENST00000296873.11@SEPT8	ENST00000296873.11	protein_coding	132777108,132765409,132764224,132763706,132762484,132761800,132761458,132761133,132760802,132756001	132777421,132765529,132764419,132763892,132762645,132761896,132761626,132761265,132760992,132758824	Gene ID= ENSG00000164402.13 TPM= 16.99 Transcript Type= protein_coding
chr5	132758143	132777250	132758143	132777250	-	transcript3067.chr5.nic@SEPT8	transcript3067.chr5.nic	protein_coding	132777108,132765409,132764224,132763706,132762484,132761800,132761458,132761133,132758143	132777250,132765529,132764419,132763892,132762645,132761896,132761626,132761265,132760992	Gene ID= ENSG00000164402.13 TPM= 7.44 Transcript Type= NA
chr5	132750817	132777375	132750817	132777375	-	ENST00000378719.6@SEPT8	ENST00000378719.6	protein_coding	132777108,132765409,132764224,132763706,132762484,132761800,132761458,132761133,132760802,132750817	132777375,132765529,132764419,132763892,132762645,132761896,132761626,132761265,132760992,132752181	Gene ID= ENSG00000164402.13 TPM= 20.18 Transcript Type= protein_coding
chr5	132866630	132867687	132866630	132867687	+	ENST00000378667.1@UQCRQ	ENST00000378667.1	protein_coding	132866630,132866869,132867488	132866691,132867035,132867687	Gene ID= ENSG00000164405.10 TPM= 1014.36 Transcript Type= protein_coding
chr5	132866642	132867699	132866642	132867699	+	ENST00000496429.1@UQCRQ	ENST00000496429.1	protein_coding	132866642,132867488	132866687,132867699	Gene ID= ENSG00000164405.10 TPM= 285.72 Transcript Type= processed_transcript
chr5	132866646	132867683	132866646	132867683	+	ENST00000378665.1@UQCRQ	ENST00000378665.1	protein_coding	132866646,132867488	132867035,132867683	Gene ID= ENSG00000164405.10 TPM= 20.18 Transcript Type= protein_coding
chr5	132875379	132963634	132875379	132963634	-	ENST00000265343.9@AFF4	ENST00000265343.9	protein_coding	132963259,132937067,132934147,132932178,132927121,132904368,132902442,132899587,132899104,132898230,132896323,132893030,132892164,132889079,132888097,132887846,132887521,132886310,132885076,132883340,132875379	132963634,132937193,132934941,132932222,132927207,132904404,132902487,132899641,132899141,132898392,132897240,132893118,132892404,132889173,132888160,132887982,132887592,132886403,132885119,132883560,132881186	Gene ID= ENSG00000072364.12 TPM= 6.37 Transcript Type= protein_coding
chr5	132996985	133026604	132996985	133026604	-	ENST00000324170.7@ZCCHC10	ENST00000324170.7	protein_coding	133026497,133006759,133000132,132996985	133026604,133006920,133000173,132998850	Gene ID= ENSG00000155329.11 TPM= 10.62 Transcript Type= protein_coding
chr5	133019038	133026589	133019038	133026589	-	ENST00000504170.2@ZCCHC10	ENST00000504170.2	protein_coding	133026497,133022841,133019038	133026589,133022906,133019203	Gene ID= ENSG00000155329.11 TPM= 3.19 Transcript Type= protein_coding
chr5	132996996	133026549	132996996	133026549	-	ENST00000355372.6@ZCCHC10	ENST00000355372.6	protein_coding	133026497,133022841,133006759,133000132,132996996	133026549,133022906,133006920,133000173,132998832	Gene ID= ENSG00000155329.11 TPM= 5.31 Transcript Type= protein_coding
chr5	132998100	133026545	132998100	133026545	-	ENST00000509437.5@ZCCHC10	ENST00000509437.5	protein_coding	133026497,133022841,133006759,133000132,132998100	133026545,133022906,133006920,133000173,132998850	Gene ID= ENSG00000155329.11 TPM= 2.12 Transcript Type= protein_coding
chr5	133051065	133051876	133051065	133051876	-	transcript3109.chr5.nnic@NA	transcript3109.chr5.nnic	NA	133051065	133051876	Gene ID= novel_gene_chr5_3110 TPM= 3.19 Transcript Type= NA
chr5	133051962	133106449	133051962	133106449	+	ENST00000304858.6@HSPA4	ENST00000304858.6	protein_coding	133051962,133064980,133067417,133070374,133073230,133073993,133076654,133086782,133088404,133089055,133089562,133091193,133092700,133096098,133097161,133099545,133101759,133103865,133104233	133052357,133065037,133067557,133070496,133073329,133074126,133076898,133086858,133088555,133089161,133089695,133091374,133092789,133096250,133097286,133099652,133101878,133104026,133106449	Gene ID= ENSG00000170606.14 TPM= 10.62 Transcript Type= protein_coding
chr5	133052003	133052977	133052003	133052977	+	transcript3107.chr5.nnic@NA	transcript3107.chr5.nnic	NA	133052003	133052977	Gene ID= novel_gene_chr5_3108 TPM= 2.12 Transcript Type= NA
chr5	133955502	133968787	133955502	133968787	-	ENST00000231512.4@C5orf15	ENST00000231512.4	protein_coding	133968446,133959494,133955502	133968787,133960020,133956990	Gene ID= ENSG00000113583.7 TPM= 64.79 Transcript Type= protein_coding
chr5	133971915	134005133	133971915	134005133	-	ENST00000265333.7@VDAC1	ENST00000265333.7	protein_coding	134004895,133992946,133992306,133991002,133990855,133980729,133975871,133973791,133971915	134005133,133993018,133992355,133991154,133990907,133980956,133976021,133973848,133972862	Gene ID= ENSG00000213585.10 TPM= 49.57 Transcript Type= protein_coding
chr5	133971952	134004842	133971952	134004842	-	ENST00000395047.6@VDAC1	ENST00000395047.6	protein_coding	134004647,133992946,133992306,133991002,133990855,133980729,133975871,133973791,133971952	134004842,133993018,133992355,133991154,133990907,133980956,133976021,133973848,133972862	Gene ID= ENSG00000213585.10 TPM= 216.68 Transcript Type= protein_coding
chr5	134157941	134176950	134157941	134176950	-	ENST00000328392.10@SKP1	ENST00000328392.10	protein_coding	134176855,134173926,134167170,134160987,134158455,134157941	134176950,134174022,134167243,134161130,134158595,134157960	Gene ID= ENSG00000113558.18 TPM= 2.66 Transcript Type= protein_coding
chr5	134194334	134226142	134194334	134226142	-	ENST00000481195.5@PPP2CA	ENST00000481195.5	protein_coding	134225760,134205922,134201848,134200985,134200335,134199086,134194334	134226142,134206131,134202021,134201074,134200496,134199204,134197844	Gene ID= ENSG00000113575.9 TPM= 4.25 Transcript Type= protein_coding
chr5	134371179	134391992	134371179	134391992	+	ENST00000265339.6@UBE2B	ENST00000265339.6	protein_coding	134371179,134374383,134376669,134380719,134388325,134390225	134371639,134374463,134376694,134380808,134388413,134391992	Gene ID= ENSG00000119048.7 TPM= 9.56 Transcript Type= protein_coding
chr5	134371558	134373640	134371558	134373640	-	transcript3178.chr5.nnic@NA	transcript3178.chr5.nnic	NA	134371558	134373640	Gene ID= novel_gene_chr5_3179 TPM= 2.12 Transcript Type= NA
chr5	134384684	134384856	134384684	134384856	-	transcript3180.chr5.nnic@NA	transcript3180.chr5.nnic	NA	134384684	134384856	Gene ID= novel_gene_chr5_3181 TPM= 2.12 Transcript Type= NA
chr5	134402087	134411898	134402087	134411898	-	ENST00000458198.2@CDKN2AIPNL	ENST00000458198.2	protein_coding	134411616,134409903,134402087	134411898,134410002,134402926	Gene ID= ENSG00000237190.3 TPM= 71.16 Transcript Type= protein_coding
chr5	134524376	134579474	134524376	134579474	+	transcript3188.chr5.nic@JADE2	transcript3188.chr5.nic	protein_coding	134524376,134535858,134537989,134552052,134559830,134560746,134562200,134564494,134566116,134573645,134576768,134578494	134524429,134535915,134538083,134552209,134559990,134560957,134562367,134564610,134566580,134573762,134576896,134579474	Gene ID= ENSG00000043143.20 TPM= 7.44 Transcript Type= NA
chr5	134526288	134527695	134526288	134527695	-	transcript3192.chr5.nnic@NA	transcript3192.chr5.nnic	NA	134527568,134526288	134527695,134526708	Gene ID= novel_gene_chr5_3193 TPM= 6.37 Transcript Type= NA
chr5	134601144	134632988	134601144	134632988	-	ENST00000402673.6@SAR1B	ENST00000402673.6	protein_coding	134632728,134623962,134620933,134612691,134609571,134608372,134601144	134632988,134624037,134621052,134612756,134609674,134608503,134607066	Gene ID= ENSG00000152700.13 TPM= 115.78 Transcript Type= protein_coding
chr5	134647870	134648735	134647870	134648735	-	transcript3203.chr5.nnic@NA	transcript3203.chr5.nnic	NA	134647870	134648735	Gene ID= novel_gene_chr5_3204 TPM= 3.19 Transcript Type= NA
chr5	134648824	134693698	134648824	134693698	+	ENST00000322887.8@SEC24A	ENST00000322887.8	protein_coding	134648824,134661119,134666823,134671809,134674615,134675045,134676023,134679602,134682373,134686790,134688181,134692602,134693031	134649173,134661586,134666996,134671886,134674775,134675217,134676125,134679728,134682482,134686902,134688299,134692657,134693698	Gene ID= ENSG00000113615.12 TPM= 2.12 Transcript Type= protein_coding
chr5	134738501	134752160	134738501	134752160	+	ENST00000297156.3@CAMLG	ENST00000297156.3	protein_coding	134738501,134741063,134743987,134750759	134738792,134741523,134744052,134752160	Gene ID= ENSG00000164615.4 TPM= 4.25 Transcript Type= protein_coding
chr5	134738500	134751396	134738500	134751396	+	transcript3214.chr5.nnic@CAMLG	transcript3214.chr5.nnic	protein_coding	134738500,134741063,134750759	134738792,134741523,134751396	Gene ID= ENSG00000164615.4 TPM= 2.12 Transcript Type= NA
chr5	134738501	134751387	134738501	134751387	+	transcript3216.chr5.nnic@CAMLG	transcript3216.chr5.nnic	protein_coding	134738501,134750759	134738792,134751387	Gene ID= ENSG00000164615.4 TPM= 3.19 Transcript Type= NA
chr5	134738583	134751377	134738583	134751377	+	ENST00000514518.1@CAMLG	ENST00000514518.1	protein_coding	134738583,134743987,134750759	134738792,134744052,134751377	Gene ID= ENSG00000164615.4 TPM= 2.12 Transcript Type= protein_coding
chr5	134758768	134777668	134758768	134777668	+	transcript3227.chr5.nic@DDX46	transcript3227.chr5.nic	protein_coding	134758768,134763904,134766917,134770903,134773696,134777574	134758955,134764092,134767060,134770999,134773861,134777668	Gene ID= ENSG00000145833.15 TPM= 3.19 Transcript Type= NA
chr5	134845988	134859737	134845988	134859737	+	ENST00000394976.3@C5orf24	ENST00000394976.3	protein_coding	134845988,134854898	134846212,134859737	Gene ID= ENSG00000181904.8 TPM= 10.62 Transcript Type= protein_coding
chr5	134874280	134901262	134874280	134901262	+	transcript3242.chr5.nic@TXNDC15	transcript3242.chr5.nic	protein_coding	134874280,134887695,134893492,134896294,134899489,134901066	134874530,134888182,134893655,134896424,134900154,134901262	Gene ID= ENSG00000113621.14 TPM= 4.25 Transcript Type= NA
chr5	134873803	134901525	134873803	134901525	+	ENST00000358387.8@TXNDC15	ENST00000358387.8	protein_coding	134873803,134887695,134893492,134896294,134899489	134874530,134888182,134893655,134896424,134901525	Gene ID= ENSG00000113621.14 TPM= 31.86 Transcript Type= protein_coding
chr5	134904743	134905691	134904743	134905691	+	transcript3261.chr5.nnic@NA	transcript3261.chr5.nnic	NA	134904743	134905691	Gene ID= novel_gene_chr5_3262 TPM= 3.19 Transcript Type= NA
chr5	134904906	134961277	134904906	134961277	+	ENST00000254908.10@PCBD2	ENST00000254908.10	protein_coding	134904906,134910335,134959040,134960586	134905223,134910466,134959120,134961277	Gene ID= ENSG00000132570.14 TPM= 4.25 Transcript Type= protein_coding
chr5	134905235	134905691	134905235	134905691	+	ENST00000623591.1@AC006077.2	ENST00000623591.1	TEC	134905235	134905691	Gene ID= ENSG00000279799.1 TPM= 1.06 Transcript Type= TEC
chr5	135334381	135399265	135334381	135399265	-	transcript3269.chr5.nic@H2AFY	transcript3269.chr5.nic	protein_coding	135399062,135388922,135370036,135369406,135360497,135350823,135345968,135343260,135334381	135399265,135389126,135370142,135369603,135360604,135350913,135346057,135343434,135335141	Gene ID= ENSG00000113648.16 TPM= 59.48 Transcript Type= NA
chr5	135333900	135399622	135333900	135399622	-	ENST00000511689.5@H2AFY	ENST00000511689.5	protein_coding	135399062,135388922,135370036,135369406,135360497,135352946,135345968,135343260,135333900	135399622,135389126,135370142,135369603,135360607,135353045,135346057,135343434,135335141	Gene ID= ENSG00000113648.16 TPM= 1.06 Transcript Type= protein_coding
chr5	135359722	135399265	135359722	135399265	-	transcript3282.chr5.nic@H2AFY	transcript3282.chr5.nic	protein_coding	135399062,135388922,135370036,135369406,135360497,135359722	135399265,135389126,135370142,135369603,135360604,135359942	Gene ID= ENSG00000113648.16 TPM= 7.44 Transcript Type= NA
chr5	135334410	135399211	135334410	135399211	-	ENST00000312469.8@H2AFY	ENST00000312469.8	protein_coding	135399062,135388922,135370036,135369406,135360497,135350823,135345968,135343260,135334410	135399211,135389126,135370142,135369603,135360607,135350913,135346057,135343434,135335141	Gene ID= ENSG00000113648.16 TPM= 112.59 Transcript Type= protein_coding
chr5	135399280	135401296	135399280	135401296	+	ENST00000602502.1@AC026691.1	ENST00000602502.1	antisense_RNA	135399280	135401296	Gene ID= ENSG00000270021.1 TPM= 6.37 Transcript Type= antisense_RNA
chr5	136028895	136063817	136028895	136063817	+	ENST00000442011.6@TGFBI	ENST00000442011.6	protein_coding	136028895,136033763,136044058,136046335,136046851,136047274,136049439,136052907,136053943,136054716,136055680,136056665,136059090,136060834,136061500,136062663,136063186	136029189,136033861,136044122,136046495,136047015,136047420,136049580,136053119,136054080,136054861,136055816,136056795,136059214,136060936,136061579,136062687,136063817	Gene ID= ENSG00000120708.16 TPM= 41.42 Transcript Type= protein_coding
chr5	136080471	136080597	136080471	136080597	-	ENST00000602301.1@VTRNA2-1	ENST00000602301.1	vaultRNA	136080471	136080597	Gene ID= ENSG00000270123.3 TPM= 1.06 Transcript Type= vaultRNA
chr5	136132845	136182732	136132845	136182732	+	ENST00000545279.5@SMAD5	ENST00000545279.5	protein_coding	136132845,136147832,136153592,136160856,136163272,136172434,136174376,136177337	136132962,136147906,136154163,136161107,136163391,136172655,136174632,136182732	Gene ID= ENSG00000113658.16 TPM= 4.25 Transcript Type= protein_coding
chr5	136132847	136182734	136132847	136182734	+	ENST00000545620.5@SMAD5	ENST00000545620.5	protein_coding	136132847,136153592,136160856,136163272,136172434,136174376,136177337	136132962,136154163,136161107,136163391,136172655,136174632,136182734	Gene ID= ENSG00000113658.16 TPM= 4.25 Transcript Type= protein_coding
chr5	136213380	136215837	136213380	136215837	+	transcript3300.chr5.nnic@NA	transcript3300.chr5.nnic	NA	136213380	136215837	Gene ID= novel_gene_chr5_3301 TPM= 2.12 Transcript Type= NA
chr5	136975298	137499348	136975298	137499348	-	ENST00000394945.5@SPOCK1	ENST00000394945.5	protein_coding	137499179,137498373,137267010,137140580,137112435,137067715,136992484,136988422,136985140,136979332,136975298	137499348,137498558,137267055,137140694,137112561,137067829,136992600,136988643,136985202,136979469,136978844	Gene ID= ENSG00000152377.13 TPM= 24.43 Transcript Type= protein_coding
chr5	137617710	137618890	137617710	137618890	+	transcript3313.chr5.nnic@NA	transcript3313.chr5.nnic	NA	137617710	137618890	Gene ID= novel_gene_chr5_3314 TPM= 2.12 Transcript Type= NA
chr5	137752616	137754395	137752616	137754395	-	transcript3317.chr5.nnic@NA	transcript3317.chr5.nnic	NA	137752616	137754395	Gene ID= novel_gene_chr5_3318 TPM= 9.56 Transcript Type= NA
chr5	137756123	137757015	137756123	137757015	+	transcript3315.chr5.nnic@NA	transcript3315.chr5.nnic	NA	137756123	137757015	Gene ID= novel_gene_chr5_3316 TPM= 2.12 Transcript Type= NA
chr5	137801193	137810751	137801193	137810751	+	ENST00000510937.1@NPY6R	ENST00000510937.1	transcribed_processed_pseudogene	137801193,137808024	137801452,137810751	Gene ID= ENSG00000226306.6 TPM= 123.21 Transcript Type= processed_transcript
chr5	137809888	137812874	137809888	137812874	+	transcript3339.chr5.nnic@NA	transcript3339.chr5.nnic	NA	137809888	137812874	Gene ID= novel_gene_chr5_3340 TPM= 3.19 Transcript Type= NA
chr5	137812379	137813844	137812379	137813844	-	transcript3343.chr5.nnic@NA	transcript3343.chr5.nnic	NA	137812379	137813844	Gene ID= novel_gene_chr5_3344 TPM= 12.75 Transcript Type= NA
chr5	137882793	137889336	137882793	137889336	-	ENST00000508281.2@AC106791.1	ENST00000508281.2	antisense_RNA	137889147,137888160,137882793	137889336,137888288,137883621	Gene ID= ENSG00000250159.6 TPM= 2.12 Transcript Type= antisense_RNA
chr5	137880530	137887851	137880530	137887851	+	transcript3328.chr5.nic@MYOT	transcript3328.chr5.nic	protein_coding	137880530,137881973,137883384,137886048,137886864,137887213	137880865,137882105,137883591,137886213,137886997,137887851	Gene ID= ENSG00000120729.9 TPM= 16.99 Transcript Type= NA
chr5	137867791	137887851	137867791	137887851	+	ENST00000239926.8@MYOT	ENST00000239926.8	protein_coding	137867791,137870441,137875829,137877520,137880816,137881973,137883384,137886048,137886864,137887213	137867953,137871007,137876003,137877621,137880865,137882105,137883591,137886213,137886997,137887851	Gene ID= ENSG00000120729.9 TPM= 12.75 Transcript Type= protein_coding
chr5	138156882	138178629	138156882	138178629	-	transcript3354.chr5.nic@BRD8	transcript3354.chr5.nic	protein_coding	138178596,138177571,138172065,138171361,138171038,138170832,138170345,138169222,138167934,138166518,138165828,138164714,138164320,138164087,138163130,138162054,138161796,138160891,138160069,138159555,138156882	138178629,138177667,138172134,138171410,138171160,138170912,138170409,138169358,138168078,138166610,138166108,138165166,138164413,138164133,138163344,138162146,138161864,138161068,138160173,138159599,138157267	Gene ID= ENSG00000112983.17 TPM= 3.9 Transcript Type= NA
chr5	138156882	138178630	138156882	138178630	-	ENST00000230901.9@BRD8	ENST00000230901.9	protein_coding	138178596,138177571,138172065,138171361,138171038,138170832,138170345,138169222,138168470,138167934,138166518,138165828,138164714,138164320,138164087,138163130,138162054,138161796,138160891,138160069,138159555,138156882	138178630,138177667,138172134,138171410,138171160,138170912,138170409,138169358,138168688,138168078,138166727,138166108,138165166,138164413,138164133,138163344,138162146,138161864,138161068,138160173,138159599,138157267	Gene ID= ENSG00000112983.17 TPM= 19.83 Transcript Type= protein_coding
chr5	138156882	138178633	138156882	138178633	-	ENST00000402931.5@BRD8	ENST00000402931.5	protein_coding	138178596,138177571,138172065,138171361,138171038,138170832,138170345,138169222,138167934,138166518,138165828,138164714,138164320,138164087,138163130,138162054,138161796,138160891,138160069,138159555,138156882	138178633,138177667,138172134,138171410,138171160,138170912,138170409,138169358,138168078,138166727,138166108,138165166,138164413,138164133,138163344,138162146,138161864,138161068,138160173,138159599,138157267	Gene ID= ENSG00000112983.17 TPM= 12.4 Transcript Type= protein_coding
chr5	138187648	138213343	138187648	138213343	-	ENST00000394886.6@CDC23	ENST00000394886.6	protein_coding	138213152,138212991,138206547,138202113,138201343,138201107,138198605,138198426,138198199,138192504,138192269,138191862,138191474,138189828,138189633,138187648	138213343,138213063,138206684,138202155,138201448,138201239,138198782,138198523,138198280,138192657,138192388,138191937,138191535,138189906,138189752,138189148	Gene ID= ENSG00000094880.10 TPM= 30.8 Transcript Type= protein_coding
chr5	138201515	138213341	138201515	138213341	-	transcript3363.chr5.nic@CDC23	transcript3363.chr5.nic	protein_coding	138213152,138212991,138206547,138201515	138213341,138213063,138206684,138202155	Gene ID= ENSG00000094880.10 TPM= 2.12 Transcript Type= NA
chr5	138205871	138213343	138205871	138213343	-	ENST00000394884.7@CDC23	ENST00000394884.7	protein_coding	138213152,138212991,138205871	138213343,138213063,138206684	Gene ID= ENSG00000094880.10 TPM= 6.37 Transcript Type= protein_coding
chr5	138338032	138349729	138338032	138349729	+	ENST00000239906.9@FAM53C	ENST00000239906.9	protein_coding	138338032,138341184,138341809,138344825,138346702	138338307,138341413,138341866,138345609,138349729	Gene ID= ENSG00000120709.10 TPM= 45.67 Transcript Type= protein_coding
chr5	138352596	138437027	138352596	138437027	+	ENST00000314358.9@KDM3B	ENST00000314358.9	protein_coding	138352596,138372674,138375093,138377720,138379584,138381516,138386022,138391013,138393171,138398178,138399860,138415132,138417483,138418953,138420706,138424075,138425411,138426975,138427189,138427967,138429826,138430249,138431425,138435620	138352987,138372841,138375206,138377825,138379708,138381590,138386621,138392261,138393372,138398392,138400012,138415239,138417610,138419232,138420962,138424341,138425582,138427065,138427319,138428086,138429965,138430425,138431559,138437027	Gene ID= ENSG00000120733.13 TPM= 42.49 Transcript Type= protein_coding
chr5	138439087	138446969	138439087	138446969	+	ENST00000254901.9@REEP2	ENST00000254901.9	protein_coding	138439087,138441016,138441385,138444415,138444754,138445234,138445468,138445683	138439240,138441088,138441461,138444535,138444867,138445375,138445598,138446969	Gene ID= ENSG00000132563.15 TPM= 8.5 Transcript Type= protein_coding
chr5	138465490	138469315	138465490	138469315	+	ENST00000239938.4@EGR1	ENST00000239938.4	protein_coding	138465490,138466757	138466068,138469315	Gene ID= ENSG00000120738.7 TPM= 70.1 Transcript Type= protein_coding
chr5	138506099	138543300	138506099	138543300	-	ENST00000360541.9@ETF1	ENST00000360541.9	protein_coding	138543097,138542833,138518692,138517561,138513568,138512764,138511475,138511045,138510565,138508669,138506099	138543300,138542936,138518867,138517700,138513706,138512954,138511604,138511200,138510629,138508816,138508387	Gene ID= ENSG00000120705.12 TPM= 3.19 Transcript Type= protein_coding
chr5	138507444	138542943	138507444	138542943	-	transcript3386.chr5.nic@ETF1	transcript3386.chr5.nic	protein_coding	138542833,138518692,138517561,138513568,138512764,138511475,138511045,138510565,138508669,138507444	138542943,138518867,138517700,138513706,138512954,138511604,138511200,138510629,138508816,138508387	Gene ID= ENSG00000120705.12 TPM= 6.37 Transcript Type= NA
chr5	138543458	138544242	138543458	138544242	+	transcript3391.chr5.nnic@NA	transcript3391.chr5.nnic	NA	138543458	138544242	Gene ID= novel_gene_chr5_3392 TPM= 2.12 Transcript Type= NA
chr5	138554882	138575444	138554882	138575444	-	ENST00000297185.7@HSPA9	ENST00000297185.7	protein_coding	138575238,138574068,138573763,138570960,138568925,138567649,138567455,138567001,138566626,138561580,138559864,138558553,138557869,138557402,138556774,138556452,138554882	138575444,138574126,138573850,138571141,138569049,138567722,138567561,138567163,138566718,138561789,138560091,138558657,138557986,138557496,138556866,138556592,138556114	Gene ID= ENSG00000113013.12 TPM= 61.61 Transcript Type= protein_coding
chr5	138753423	138935034	138753423	138935034	+	ENST00000302763.11@CTNNA1	ENST00000302763.11	protein_coding	138753423,138781923,138783177,138810038,138812183,138824530,138827515,138886212,138887490,138904349,138917742,138924510,138925256,138929246,138930473,138930830,138932578,138933802	138753510,138782029,138783372,138810204,138812302,138824799,138827718,138886292,138887642,138904441,138917898,138924710,138925407,138929356,138930654,138930935,138932712,138935034	Gene ID= ENSG00000044115.20 TPM= 326.79 Transcript Type= protein_coding
chr5	138754233	138759650	138754233	138759650	-	transcript3442.chr5.nnic@NA	transcript3442.chr5.nnic	NA	138754233	138759650	Gene ID= novel_gene_chr5_3443 TPM= 5.31 Transcript Type= NA
chr5	138858575	138860583	138858575	138860583	-	transcript3446.chr5.nnic@NA	transcript3446.chr5.nnic	NA	138858575	138860583	Gene ID= novel_gene_chr5_3447 TPM= 5.31 Transcript Type= NA
chr5	139274103	139330394	139274103	139330394	+	ENST00000361059.7@MATR3	ENST00000361059.7	protein_coding	139274103,139276121,139278327,139279051,139307239,139314675,139315697,139316076,139317053,139317596,139318908,139319334,139321898,139322463,139322598,139325440,139326163,139329345	139274161,139276150,139278408,139279129,139308327,139314736,139315738,139316188,139317105,139317721,139319033,139319501,139322029,139322506,139322967,139325662,139326284,139330394	Gene ID= ENSG00000280987.4 TPM= 1.06 Transcript Type= protein_coding
chr5	139293706	139330441	139293706	139330441	+	transcript3463.chr5.nic@MATR3	transcript3463.chr5.nic	protein_coding	139293706,139307239,139314675,139315697,139316076,139317053,139317596,139318908,139319334,139321898,139322463,139322598,139325296,139326163,139329345	139293805,139308327,139314736,139315738,139316188,139317105,139317721,139319033,139319501,139322029,139322506,139322967,139325662,139326284,139330441	Gene ID= ENSG00000015479.18 TPM= 8.85 Transcript Type= NA
chr5	139293648	139331359	139293648	139331359	+	ENST00000394805.7@MATR3	ENST00000394805.7	protein_coding	139293648,139307239,139314675,139315697,139316076,139317053,139317596,139318908,139319334,139321898,139322463,139322598,139325440,139326163,139329345	139293805,139308327,139314736,139315738,139316188,139317105,139317721,139319033,139319501,139322029,139322506,139322967,139325662,139326284,139331359	Gene ID= ENSG00000015479.18 TPM= 4.6 Transcript Type= protein_coding
chr5	139293778	139330441	139293778	139330441	+	ENST00000618441.5@MATR3	ENST00000618441.5	protein_coding	139293778,139307239,139314675,139315697,139316076,139317053,139317596,139318908,139319334,139321898,139322463,139322598,139325440,139326163,139329345	139294028,139308327,139314736,139315738,139316188,139317105,139317721,139319033,139319501,139322029,139322506,139322967,139325662,139326284,139330441	Gene ID= ENSG00000015479.18 TPM= 20.18 Transcript Type= protein_coding
chr5	139293734	139296502	139293734	139296502	+	transcript3499.chr5.nnic@NA	transcript3499.chr5.nnic	NA	139293734	139296502	Gene ID= novel_gene_chr5_3500 TPM= 2.12 Transcript Type= NA
chr5	139293742	139369720	139293742	139369720	+	transcript3504.chr5.nnic@PAIP2	transcript3504.chr5.nnic	protein_coding	139293742,139363759,139364564,139368733	139293805,139363922,139364743,139369720	Gene ID= ENSG00000120727.12 TPM= 9.56 Transcript Type= NA
chr5	139341832	139369698	139341832	139369698	+	ENST00000265192.8@PAIP2	ENST00000265192.8	protein_coding	139341832,139363759,139364564,139368733	139341980,139363922,139364743,139369698	Gene ID= ENSG00000120727.12 TPM= 402.56 Transcript Type= protein_coding
chr5	139390592	139395713	139390592	139395713	-	ENST00000434752.3@PROB1	ENST00000434752.3	protein_coding	139390592	139395713	Gene ID= ENSG00000228672.3 TPM= 82.85 Transcript Type= protein_coding
chr5	139401501	139404067	139401501	139404067	-	ENST00000451821.6@SPATA24	ENST00000451821.6	protein_coding	139403944,139402628,139401915,139401501	139404067,139402693,139402045,139401825	Gene ID= ENSG00000170469.10 TPM= 2.12 Transcript Type= protein_coding
chr5	139396767	139404068	139396767	139404068	-	ENST00000450845.6@SPATA24	ENST00000450845.6	protein_coding	139403944,139402628,139401915,139401755,139397041,139396767	139404068,139402693,139402045,139401825,139397143,139396929	Gene ID= ENSG00000170469.10 TPM= 3.19 Transcript Type= protein_coding
chr5	139410203	139439526	139410203	139439526	-	ENST00000302060.9@DNAJC18	ENST00000302060.9	protein_coding	139439406,139437372,139428538,139426172,139425005,139422708,139420053,139410203	139439526,139437558,139428683,139426357,139425114,139422817,139420225,139414272	Gene ID= ENSG00000170464.9 TPM= 5.31 Transcript Type= protein_coding
chr5	139419068	139439471	139419068	139439471	-	transcript3519.chr5.nic@DNAJC18	transcript3519.chr5.nic	protein_coding	139439406,139437372,139428538,139426172,139425005,139422708,139420053,139419068	139439471,139437558,139428683,139426357,139425114,139422817,139420225,139419172	Gene ID= ENSG00000170464.9 TPM= 2.12 Transcript Type= NA
chr5	139448556	139462743	139448556	139462743	-	ENST00000618155.2@ECSCR	ENST00000618155.2	protein_coding	139462610,139458139,139457757,139457545,139456474,139455323,139454825,139454602,139449078,139448556	139462743,139458183,139457807,139457604,139456518,139455436,139454923,139454638,139449174,139448908	Gene ID= ENSG00000249751.3 TPM= 9.56 Transcript Type= protein_coding
chr5	139475533	139482721	139475533	139482721	-	transcript3530.chr5.nic@TMEM173	transcript3530.chr5.nic	protein_coding	139482550,139482210,139481478,139481159,139480790,139478270,139475533	139482721,139482302,139481704,139481342,139480898,139478508,139476454	Gene ID= ENSG00000184584.12 TPM= 9.13 Transcript Type= NA
chr5	139475534	139482757	139475534	139482757	-	transcript3531.chr5.nic@TMEM173	transcript3531.chr5.nic	protein_coding	139482550,139482210,139481159,139480790,139478270,139477329,139475534	139482757,139482302,139481342,139480898,139478508,139477515,139476454	Gene ID= ENSG00000184584.12 TPM= 6.21 Transcript Type= NA
chr5	139475534	139482739	139475534	139482739	-	transcript3532.chr5.nic@TMEM173	transcript3532.chr5.nic	protein_coding	139482550,139482210,139481159,139480790,139478270,139477329,139475534	139482739,139482302,139481704,139480898,139478508,139477515,139476454	Gene ID= ENSG00000184584.12 TPM= 4.09 Transcript Type= NA
chr5	139475533	139482758	139475533	139482758	-	transcript3537.chr5.nic@TMEM173	transcript3537.chr5.nic	protein_coding	139482550,139482210,139481159,139480790,139478270,139475533	139482758,139482302,139481342,139480898,139478508,139476454	Gene ID= ENSG00000184584.12 TPM= 5.95 Transcript Type= NA
chr5	139475534	139482698	139475534	139482698	-	ENST00000507297.5@TMEM173	ENST00000507297.5	protein_coding	139482550,139482210,139480790,139478270,139477329,139475534	139482698,139482302,139481704,139479204,139477515,139476454	Gene ID= ENSG00000184584.12 TPM= 2.39 Transcript Type= retained_intron
chr5	139475534	139479876	139475534	139479876	-	transcript3544.chr5.nic@TMEM173	transcript3544.chr5.nic	protein_coding	139478270,139477329,139475534	139479876,139477515,139476454	Gene ID= ENSG00000184584.12 TPM= 30.64 Transcript Type= NA
chr5	139475964	139482790	139475964	139482790	-	ENST00000330794.8@TMEM173	ENST00000330794.8	protein_coding	139482550,139482210,139481478,139481159,139480790,139478270,139477329,139475964	139482790,139482302,139481704,139481342,139480898,139478508,139477515,139476454	Gene ID= ENSG00000184584.12 TPM= 22.31 Transcript Type= protein_coding
chr5	139561166	139628433	139561166	139628433	+	ENST00000398733.7@UBE2D2	ENST00000398733.7	protein_coding	139561166,139600372,139614586,139614697,139614861,139623368,139626756	139561815,139600435,139614617,139614774,139614966,139623461,139628433	Gene ID= ENSG00000131508.15 TPM= 77.54 Transcript Type= protein_coding
chr5	139561383	139626855	139561383	139626855	+	transcript3560.chr5.nnic@UBE2D2	transcript3560.chr5.nnic	protein_coding	139561383,139600372,139623368,139626756	139561815,139600435,139623461,139626855	Gene ID= ENSG00000131508.15 TPM= 6.37 Transcript Type= NA
chr5	139561167	139623444	139561167	139623444	+	ENST00000505007.5@UBE2D2	ENST00000505007.5	protein_coding	139561167,139562244,139600372,139614586,139614697,139614861,139623368	139561815,139562407,139600435,139614617,139614774,139614966,139623444	Gene ID= ENSG00000131508.15 TPM= 3.19 Transcript Type= protein_coding
chr5	139648314	139683882	139648314	139683882	+	transcript3566.chr5.nic@CXXC5	transcript3566.chr5.nic	protein_coding	139648314,139679847,139680364,139682863	139648845,139679940,139681447,139683882	Gene ID= ENSG00000171604.11 TPM= 8.5 Transcript Type= NA
chr5	139648933	139683593	139648933	139683593	+	ENST00000511048.1@CXXC5	ENST00000511048.1	protein_coding	139648933,139680364,139682863	139649009,139681447,139683593	Gene ID= ENSG00000171604.11 TPM= 4.25 Transcript Type= protein_coding
chr5	139648292	139683882	139648292	139683882	+	ENST00000302517.7@CXXC5	ENST00000302517.7	protein_coding	139648292,139680364,139682863	139648845,139681447,139683882	Gene ID= ENSG00000171604.11 TPM= 105.15 Transcript Type= protein_coding
chr5	139847649	140043280	139847649	140043280	-	transcript3580.chr5.nic@NRG2	transcript3580.chr5.nic	protein_coding	140042370,139887340,139880856,139871721,139865549,139865115,139855676,139852904,139852432,139851604,139847649	140043280,139887511,139880974,139871841,139865625,139865173,139855778,139853027,139852559,139851831,139848697	Gene ID= ENSG00000158458.19 TPM= 6.37 Transcript Type= NA
chr5	140107741	140115276	140107741	140115276	+	transcript3585.chr5.nnic@PURA	transcript3585.chr5.nnic	protein_coding	140107741,140114041	140108219,140115276	Gene ID= ENSG00000185129.5 TPM= 22.66 Transcript Type= NA
chr5	140107741	140115415	140107741	140115415	+	transcript3586.chr5.nnic@PURA	transcript3586.chr5.nnic	protein_coding	140107741,140114041	140108219,140115415	Gene ID= ENSG00000185129.5 TPM= 4.07 Transcript Type= NA
chr5	140107832	140115974	140107832	140115974	+	transcript3587.chr5.nnic@PURA	transcript3587.chr5.nnic	protein_coding	140107832,140114041	140108219,140115974	Gene ID= ENSG00000185129.5 TPM= 4.07 Transcript Type= NA
chr5	140107741	140116840	140107741	140116840	+	transcript3588.chr5.nnic@PURA	transcript3588.chr5.nnic	protein_coding	140107741,140114041	140108219,140116840	Gene ID= ENSG00000185129.5 TPM= 19.12 Transcript Type= NA
chr5	140119667	140124850	140119667	140124850	+	transcript3591.chr5.nnic@NA	transcript3591.chr5.nnic	NA	140119667	140124850	Gene ID= novel_gene_chr5_3592 TPM= 3.19 Transcript Type= NA
chr5	140126195	140128778	140126195	140128778	+	transcript3593.chr5.nnic@NA	transcript3593.chr5.nnic	NA	140126195	140128778	Gene ID= novel_gene_chr5_3594 TPM= 15.93 Transcript Type= NA
chr5	140175139	140228910	140175139	140228910	+	transcript3596.chr5.nnic@CYSTM1	transcript3596.chr5.nnic	protein_coding	140175139,140194446,140228730	140175285,140194652,140228910	Gene ID= ENSG00000120306.9 TPM= 5.31 Transcript Type= NA
chr5	140174642	140243789	140174642	140243789	+	ENST00000261811.5@CYSTM1	ENST00000261811.5	protein_coding	140174642,140194446,140243305	140175285,140194652,140243789	Gene ID= ENSG00000120306.9 TPM= 238.99 Transcript Type= protein_coding
chr5	140175138	140243789	140175138	140243789	+	transcript3602.chr5.nic@CYSTM1	transcript3602.chr5.nic	protein_coding	140175138,140243305	140175285,140243789	Gene ID= ENSG00000120306.9 TPM= 7.97 Transcript Type= NA
chr5	140240578	140244818	140240578	140244818	+	transcript3604.chr5.nnic@NA	transcript3604.chr5.nnic	NA	140240578	140244818	Gene ID= novel_gene_chr5_3605 TPM= 5.31 Transcript Type= NA
chr5	140245039	140303121	140245039	140303121	-	ENST00000261813.8@PFDN1	ENST00000261813.8	protein_coding	140303041,140300416,140281449,140245039	140303121,140300582,140281533,140246057	Gene ID= ENSG00000113068.9 TPM= 123.21 Transcript Type= protein_coding
chr5	140245125	140303113	140245125	140303113	-	ENST00000510217.1@PFDN1	ENST00000510217.1	protein_coding	140303041,140281449,140245125	140303113,140281533,140246057	Gene ID= ENSG00000113068.9 TPM= 1.06 Transcript Type= protein_coding
chr5	140332843	140346631	140332843	140346631	-	ENST00000230990.6@HBEGF	ENST00000230990.6	protein_coding	140346283,140345911,140342635,140335872,140334658,140332843	140346631,140346084,140342812,140336027,140334748,140334280	Gene ID= ENSG00000113070.7 TPM= 115.78 Transcript Type= protein_coding
chr5	140401789	140524133	140401789	140524133	+	transcript3610.chr5.nic@ANKHD1	transcript3610.chr5.nic	protein_coding	140401789,140436104,140438461,140440119,140440995,140445742,140449211,140458625,140459164,140464667,140472239,140482580,140485121,140485589,140486958,140496520,140504821,140505122,140505724,140506835,140507785,140509637,140510019,140512828,140513363,140524066	140402273,140436257,140438617,140440266,140441142,140445975,140449305,140458862,140459355,140464776,140472295,140482667,140485248,140485732,140487060,140497278,140504966,140505233,140505869,140506977,140507998,140509812,140510181,140512923,140513479,140524133	Gene ID= ENSG00000131503.20 TPM= 6 Transcript Type= NA
chr5	140401789	140524133	140401789	140524133	+	transcript3611.chr5.nic@ANKHD1	transcript3611.chr5.nic	protein_coding	140401789,140436104,140438461,140440119,140440995,140445742,140449211,140458625,140459164,140464667,140472239,140482580,140485121,140485589,140487006,140496520,140504821,140505122,140505724,140506835,140507785,140509637,140510019,140512828,140513363,140524066	140402273,140436257,140438617,140440266,140441142,140445975,140449305,140458862,140459355,140464776,140472295,140482667,140485248,140485732,140487060,140497278,140504966,140505233,140505869,140506977,140507998,140509812,140510181,140512923,140513479,140524133	Gene ID= ENSG00000131503.20 TPM= 2.81 Transcript Type= NA
chr5	140401789	140524133	140401789	140524133	+	transcript3614.chr5.nic@ANKHD1	transcript3614.chr5.nic	protein_coding	140401789,140436104,140438503,140440119,140440995,140445742,140449211,140458625,140459164,140464667,140472239,140482580,140485121,140485589,140486958,140496520,140504821,140505122,140505724,140506835,140507785,140509637,140510019,140512828,140513363,140524066	140402273,140436257,140438617,140440266,140441142,140445975,140449305,140458862,140459355,140464776,140472295,140482667,140485248,140485732,140487060,140497278,140504966,140505233,140505869,140506977,140507998,140509812,140510181,140512923,140513479,140524133	Gene ID= ENSG00000131503.20 TPM= 3.71 Transcript Type= NA
chr5	140401789	140524133	140401789	140524133	+	transcript3615.chr5.nic@ANKHD1	transcript3615.chr5.nic	protein_coding	140401789,140436104,140438461,140440119,140440995,140445742,140449211,140458625,140459164,140464667,140472239,140482580,140485121,140485589,140486958,140504821,140505122,140505724,140506835,140507785,140509637,140510019,140512828,140513363,140524066	140402273,140436257,140438617,140440266,140441142,140445975,140449305,140458862,140459355,140464776,140472295,140482667,140485248,140485732,140487060,140504966,140505233,140505869,140506977,140507998,140509812,140510181,140512923,140513479,140524133	Gene ID= ENSG00000131503.20 TPM= 5.79 Transcript Type= NA
chr5	140401789	140524133	140401789	140524133	+	transcript3619.chr5.nic@ANKHD1	transcript3619.chr5.nic	protein_coding	140401789,140436104,140438503,140440119,140440995,140445742,140449211,140458625,140459164,140464667,140482580,140485121,140485589,140486958,140496520,140504821,140505122,140505724,140506835,140507785,140509637,140510019,140512828,140513363,140524066	140402273,140436257,140438617,140440266,140441142,140445975,140449305,140458862,140459355,140464776,140482667,140485248,140485732,140487060,140497278,140504966,140505233,140505869,140506977,140507998,140509812,140510181,140512923,140513479,140524133	Gene ID= ENSG00000131503.20 TPM= 2.64 Transcript Type= NA
chr5	140401789	140524133	140401789	140524133	+	transcript3620.chr5.nic@ANKHD1	transcript3620.chr5.nic	protein_coding	140401789,140436104,140438461,140440119,140440995,140445742,140449211,140458625,140459164,140464667,140482580,140485121,140485589,140486958,140504821,140505122,140505724,140506835,140507785,140509637,140510019,140512828,140513363,140524066	140402273,140436257,140438617,140440266,140441142,140445975,140449305,140458862,140459355,140464776,140482667,140485248,140485732,140487060,140504966,140505233,140505869,140506977,140507998,140509812,140510181,140512923,140513479,140524133	Gene ID= ENSG00000131503.20 TPM= 3.66 Transcript Type= NA
chr5	140401854	140472477	140401854	140472477	+	ENST00000394723.7@ANKHD1	ENST00000394723.7	protein_coding	140401854,140436104,140438461,140440119,140440995,140445742,140449211,140458625,140459164,140464667,140472239	140402273,140436257,140438617,140440266,140441142,140445975,140449305,140458862,140459355,140464776,140472477	Gene ID= ENSG00000131503.20 TPM= 15.93 Transcript Type= protein_coding
chr5	140401789	140524133	140401789	140524133	+	transcript3616.chr5.nic@ANKHD1-EIF4EBP3	transcript3616.chr5.nic	protein_coding	140401789,140436104,140438461,140440119,140440995,140445742,140449211,140458625,140459164,140464667,140482580,140485121,140485589,140486958,140496520,140504821,140505122,140505724,140506835,140507785,140509637,140510019,140512828,140513363,140524066	140402273,140436257,140438617,140440266,140441142,140445975,140449305,140458862,140459355,140464776,140482667,140485248,140485732,140487060,140497278,140504966,140505233,140505869,140506977,140507998,140509812,140510181,140512923,140513479,140524133	Gene ID= ENSG00000254996.5 TPM= 12.37 Transcript Type= NA
chr5	140550068	140557456	140550068	140557456	-	ENST00000602775.5@SRA1	ENST00000602775.5	protein_coding	140557147,140551982,140551061,140550068	140557456,140552184,140551169,140550911	Gene ID= ENSG00000213523.10 TPM= 7.44 Transcript Type= retained_intron
chr5	140550552	140557446	140550552	140557446	-	ENST00000602875.5@SRA1	ENST00000602875.5	protein_coding	140557147,140551061,140550552	140557446,140551169,140550911	Gene ID= ENSG00000213523.10 TPM= 2.12 Transcript Type= retained_intron
chr5	140547666	140549578	140547666	140549578	+	ENST00000310331.2@EIF4EBP3	ENST00000310331.2	protein_coding	140547666,140548906,140549234	140547840,140549076,140549578	Gene ID= ENSG00000243056.1 TPM= 18.06 Transcript Type= protein_coding
chr5	140558272	140564689	140558272	140564689	-	ENST00000357560.8@APBB3	ENST00000357560.8	protein_coding	140564197,140563752,140563594,140562663,140562353,140562100,140561844,140561587,140561365,140561018,140560639,140560313,140558272	140564689,140563915,140563670,140562723,140562499,140562227,140561849,140561701,140561449,140561101,140560754,140560504,140558821	Gene ID= ENSG00000113108.19 TPM= 7.44 Transcript Type= protein_coding
chr5	140564456	140569103	140564456	140569103	+	ENST00000323146.7@SLC35A4	ENST00000323146.7	protein_coding	140564456,140565873,140566565	140564858,140565971,140569103	Gene ID= ENSG00000176087.14 TPM= 74.35 Transcript Type= protein_coding
chr5	140564835	140569098	140564835	140569098	+	ENST00000612662.1@SLC35A4	ENST00000612662.1	protein_coding	140564835,140565873,140566565	140564858,140565971,140569098	Gene ID= ENSG00000176087.14 TPM= 43.55 Transcript Type= protein_coding
chr5	140631728	140633701	140631728	140633701	-	ENST00000302014.10@CD14	ENST00000302014.10	protein_coding	140633069,140631728	140633701,140632980	Gene ID= ENSG00000170458.13 TPM= 18.06 Transcript Type= protein_coding
chr5	140645285	140647785	140645285	140647785	-	ENST00000252102.8@NDUFA2	ENST00000252102.8	protein_coding	140647483,140647256,140645285	140647785,140647362,140645678	Gene ID= ENSG00000131495.8 TPM= 22.31 Transcript Type= protein_coding
chr5	140645369	140647645	140645369	140647645	-	ENST00000512088.1@NDUFA2	ENST00000512088.1	protein_coding	140647483,140647256,140645369	140647645,140647362,140645725	Gene ID= ENSG00000131495.8 TPM= 3.19 Transcript Type= protein_coding
chr5	140639427	140645402	140639427	140645402	+	ENST00000394671.7@TMCO6	ENST00000394671.7	protein_coding	140639427,140639739,140641665,140641870,140642315,140642586,140642925,140643564,140643780,140644100,140644573,140644985	140639612,140639851,140641780,140642053,140642419,140642671,140643041,140643675,140643966,140644194,140644740,140645402	Gene ID= ENSG00000113119.12 TPM= 1.06 Transcript Type= protein_coding
chr5	140647770	140662478	140647770	140662478	+	ENST00000417647.6@IK	ENST00000417647.6	protein_coding	140647770,140648471,140651714,140652088,140652977,140653938,140654516,140654681,140655829,140657554,140658737,140658939,140659315,140659756,140660115,140660758,140661620,140661899,140662179,140662302	140647924,140648537,140651806,140652147,140653144,140654052,140654586,140654727,140655992,140657662,140658776,140659164,140659333,140659834,140660195,140660815,140661708,140662007,140662213,140662478	Gene ID= ENSG00000113141.17 TPM= 194.38 Transcript Type= protein_coding
chr5	140647842	140655992	140647842	140655992	+	ENST00000508301.5@IK	ENST00000508301.5	protein_coding	140647842,140648471,140651714,140652088,140652977,140653938,140654516,140654681,140655829	140647924,140648537,140651806,140652147,140653144,140654052,140654586,140654727,140655992	Gene ID= ENSG00000113141.17 TPM= 1.06 Transcript Type= protein_coding
chr5	140664805	140674119	140664805	140674119	+	transcript3671.chr5.nic@WDR55	transcript3671.chr5.nic	protein_coding	140664805,140668234,140668415,140668612,140668891,140669079,140669333,140671269	140665103,140668334,140668502,140668791,140668990,140669248,140669690,140674119	Gene ID= ENSG00000120314.18 TPM= 8.5 Transcript Type= NA
chr5	140664676	140672345	140664676	140672345	+	ENST00000358337.9@WDR55	ENST00000358337.9	protein_coding	140664676,140668234,140668415,140668612,140668891,140669079,140669333	140665103,140668334,140668502,140668791,140668990,140669248,140672345	Gene ID= ENSG00000120314.18 TPM= 20.18 Transcript Type= protein_coding
chr5	140673173	140692024	140673173	140692024	-	ENST00000504156.5@HARS	ENST00000504156.5	protein_coding	140691215,140690855,140683100,140679788,140679002,140677908,140677655,140677327,140676989,140676654,140675017,140674679,140673173	140692024,140690944,140683219,140679883,140679127,140678015,140677753,140677420,140677116,140676896,140675133,140674825,140674328	Gene ID= ENSG00000170445.12 TPM= 71.16 Transcript Type= protein_coding
chr5	140673915	140691341	140673915	140691341	-	ENST00000438307.6@HARS	ENST00000438307.6	protein_coding	140691215,140690855,140679788,140679002,140677908,140677655,140677327,140676989,140676654,140675017,140674679,140673915	140691341,140690944,140679883,140679127,140678015,140677753,140677420,140677116,140676896,140675133,140674825,140674328	Gene ID= ENSG00000170445.12 TPM= 5.31 Transcript Type= protein_coding
chr5	140691440	140699291	140691440	140699291	+	transcript3681.chr5.nic@HARS2	transcript3681.chr5.nic	protein_coding	140691440,140691607,140693591,140693935,140694185,140695508,140695738,140696103,140696521,140696943,140697164,140697569,140697932,140698493	140691515,140691756,140693665,140694054,140694280,140695633,140695845,140696201,140696614,140697070,140697406,140697685,140698078,140699291	Gene ID= ENSG00000112855.14 TPM= 12.75 Transcript Type= NA
chr5	140691426	140699291	140691426	140699291	+	ENST00000230771.7@HARS2	ENST00000230771.7	protein_coding	140691426,140693591,140693935,140694185,140695508,140695738,140696103,140696521,140696943,140697164,140697569,140697932,140698493	140691756,140693665,140694054,140694280,140695633,140695845,140696201,140696614,140697070,140697406,140697685,140698078,140699291	Gene ID= ENSG00000112855.14 TPM= 53.11 Transcript Type= protein_coding
chr5	140700334	140706676	140700334	140706676	+	ENST00000274712.7@ZMAT2	ENST00000274712.7	protein_coding	140700334,140700819,140702006,140703918,140704426,140705613	140700478,140700912,140702129,140703991,140704571,140706676	Gene ID= ENSG00000146007.10 TPM= 4.25 Transcript Type= protein_coding
chr5	140711275	140711373	140711275	140711373	+	ENST00000363120.1@VTRNA1-1	ENST00000363120.1	misc_RNA	140711275	140711373	Gene ID= ENSG00000199990.1 TPM= 4.25 Transcript Type= misc_RNA
chr5	140718925	140719013	140718925	140719013	+	ENST00000365241.1@VTRNA1-2	ENST00000365241.1	misc_RNA	140718925	140719013	Gene ID= ENSG00000202111.1 TPM= 1.06 Transcript Type= misc_RNA
chr5	141135896	141138121	141135896	141138121	+	transcript3699.chr5.nnic@NA	transcript3699.chr5.nnic	NA	141135896	141138121	Gene ID= novel_gene_chr5_3700 TPM= 2.12 Transcript Type= NA
chr5	141208744	141211331	141208744	141211331	+	transcript3702.chr5.nnic@NA	transcript3702.chr5.nnic	NA	141208744	141211331	Gene ID= novel_gene_chr5_3703 TPM= 2.12 Transcript Type= NA
chr5	141213964	141217417	141213964	141217417	+	transcript3704.chr5.nnic@NA	transcript3704.chr5.nnic	NA	141213964	141217417	Gene ID= novel_gene_chr5_3705 TPM= 4.25 Transcript Type= NA
chr5	141245349	141249365	141245349	141249365	+	ENST00000231173.5@PCDHB15	ENST00000231173.5	protein_coding	141245349	141249365	Gene ID= ENSG00000113248.5 TPM= 3.19 Transcript Type= protein_coding
chr5	141318488	141320821	141318488	141320821	-	ENST00000313368.7@TAF7	ENST00000313368.7	protein_coding	141318488	141320821	Gene ID= ENSG00000178913.7 TPM= 381.32 Transcript Type= protein_coding
chr5	141320867	141326006	141320867	141326006	+	transcript3714.chr5.nnic@NA	transcript3714.chr5.nnic	NA	141320867,141324737	141321103,141326006	Gene ID= novel_gene_chr5_3715 TPM= 2.12 Transcript Type= NA
chr5	141326210	141329357	141326210	141329357	+	ENST00000606901.1@AC005618.1	ENST00000606901.1	lincRNA	141326210	141329357	Gene ID= ENSG00000272070.1 TPM= 3.19 Transcript Type= lincRNA
chr5	141339162	141342681	141339162	141342681	+	transcript3741.chr5.nnic@NA	transcript3741.chr5.nnic	NA	141339162	141342681	Gene ID= novel_gene_chr5_3742 TPM= 4.25 Transcript Type= NA
chr5	141343868	141512979	141343868	141512979	+	ENST00000253812.7@PCDHGA3	ENST00000253812.7	protein_coding	141343868,141494807,141505393,141510947	141346457,141494865,141505481,141512979	Gene ID= ENSG00000254245.2 TPM= 22.66 Transcript Type= protein_coding
chr5	141345528	141347799	141345528	141347799	+	transcript3735.chr5.nnic@NA	transcript3735.chr5.nnic	NA	141345528	141347799	Gene ID= novel_gene_chr5_3736 TPM= 9.56 Transcript Type= NA
chr5	141360136	141512979	141360136	141512979	+	ENST00000522605.1@PCDHGB2	ENST00000522605.1	protein_coding	141360136,141494807,141505393,141510947	141362556,141494865,141505481,141512979	Gene ID= ENSG00000253910.2 TPM= 13.1 Transcript Type= protein_coding
chr5	141370264	141512979	141370264	141512979	+	ENST00000576222.1@PCDHGB3	ENST00000576222.1	protein_coding	141370264,141494807,141505393,141510947	141372809,141494865,141505481,141512979	Gene ID= ENSG00000262209.2 TPM= 10.97 Transcript Type= protein_coding
chr5	141381828	141384937	141381828	141384937	-	transcript3745.chr5.nnic@NA	transcript3745.chr5.nnic	NA	141381828	141384937	Gene ID= novel_gene_chr5_3746 TPM= 33.99 Transcript Type= NA
chr5	141387885	141512979	141387885	141512979	+	ENST00000519479.1@PCDHGB4	ENST00000519479.1	protein_coding	141387885,141494807,141505393,141510947	141390281,141494865,141505481,141512979	Gene ID= ENSG00000253953.2 TPM= 10.97 Transcript Type= protein_coding
chr5	141390157	141396636	141390157	141396636	+	ENST00000610569.1@PCDHGA8	ENST00000610569.1	protein_coding	141390157	141396636	Gene ID= ENSG00000253767.2 TPM= 10.62 Transcript Type= protein_coding
chr5	141410851	141413269	141410851	141413269	-	transcript3749.chr5.nnic@NA	transcript3749.chr5.nnic	NA	141410851	141413269	Gene ID= novel_gene_chr5_3750 TPM= 12.75 Transcript Type= NA
chr5	141415742	141419571	141415742	141419571	-	transcript3751.chr5.nnic@NA	transcript3751.chr5.nnic	NA	141415742	141419571	Gene ID= novel_gene_chr5_3752 TPM= 43.55 Transcript Type= NA
chr5	141417691	141512979	141417691	141512979	+	ENST00000398594.3@PCDHGB7	ENST00000398594.3	protein_coding	141417691,141494807,141505393,141510947	141420274,141494865,141505481,141512979	Gene ID= ENSG00000254122.2 TPM= 10.97 Transcript Type= protein_coding
chr5	141428862	141432192	141428862	141432192	-	transcript3747.chr5.nnic@NA	transcript3747.chr5.nnic	NA	141428862	141432192	Gene ID= novel_gene_chr5_3748 TPM= 7.44 Transcript Type= NA
chr5	141472919	141474399	141472919	141474399	-	transcript3753.chr5.nnic@NA	transcript3753.chr5.nnic	NA	141472919	141474399	Gene ID= novel_gene_chr5_3754 TPM= 2.12 Transcript Type= NA
chr5	141476003	141512979	141476003	141512979	+	ENST00000308177.4@PCDHGC3	ENST00000308177.4	protein_coding	141476003,141494807,141505393,141510947	141478546,141494865,141505481,141512979	Gene ID= ENSG00000240184.6 TPM= 20.53 Transcript Type= protein_coding
chr5	141476795	141481066	141476795	141481066	+	transcript3739.chr5.nnic@NA	transcript3739.chr5.nnic	NA	141476795	141481066	Gene ID= novel_gene_chr5_3740 TPM= 7.44 Transcript Type= NA
chr5	141515022	141619055	141515022	141619055	-	ENST00000253811.10@DIAPH1	ENST00000253811.10	protein_coding	141618798,141588224,141587042,141584124,141583485,141583206,141582312,141580744,141579088,141578515,141578225,141577475,141576756,141576230,141574967,141573492,141571926,141550499,141534335,141529603,141529172,141528702,141528453,141527571,141526297,141526038,141524143,141515022	141619055,141588250,141587197,141584225,141583615,141583292,141582375,141580883,141579196,141578625,141578343,141577591,141576871,141576294,141575146,141574208,141572040,141550507,141534433,141529697,141529273,141528941,141528582,141527697,141526459,141526173,141524229,141517008	Gene ID= ENSG00000131504.15 TPM= 77.54 Transcript Type= protein_coding
chr5	141620876	141636870	141620876	141636870	-	ENST00000305264.7@HDAC3	ENST00000305264.7	protein_coding	141636736,141636548,141634811,141630044,141629860,141629684,141629173,141628559,141628114,141627893,141626194,141626013,141625685,141625208,141620876	141636870,141636630,141634953,141630125,141629916,141629739,141629306,141628639,141628187,141627957,141626283,141626071,141625764,141625365,141621537	Gene ID= ENSG00000171720.9 TPM= 92.06 Transcript Type= protein_coding
chr5	141620876	141636868	141620876	141636868	-	transcript3763.chr5.nic@HDAC3	transcript3763.chr5.nic	protein_coding	141636736,141636548,141630044,141629860,141629684,141629173,141628559,141628114,141627893,141626194,141626013,141625685,141625208,141620876	141636868,141636630,141630125,141629916,141629739,141629306,141628639,141628187,141627957,141626283,141626071,141625764,141625365,141621537	Gene ID= ENSG00000171720.9 TPM= 7.08 Transcript Type= NA
chr5	141637026	141641077	141637026	141641077	+	ENST00000297164.7@RELL2	ENST00000297164.7	protein_coding	141637026,141638795,141638955,141639464,141639920,141640412,141640671	141638409,141638860,141639021,141639649,141640295,141640445,141641077	Gene ID= ENSG00000164620.8 TPM= 1.06 Transcript Type= protein_coding
chr5	141862652	141878410	141862652	141878410	-	ENST00000394536.4@PCDH1	ENST00000394536.4	protein_coding	141878223,141868569,141862652	141878410,141869431,141865427	Gene ID= ENSG00000156453.13 TPM= 14.87 Transcript Type= protein_coding
chr5	141923791	141940152	141923791	141940152	+	transcript3783.chr5.nnic@KIAA0141	transcript3783.chr5.nnic	protein_coding	141923791,141924581,141925410,141928151,141929582,141929989,141930178,141933259,141934240,141934494,141937198,141938521,141939506	141923972,141924695,141925527,141928298,141929740,141930074,141930274,141933401,141934398,141934586,141937357,141938760,141940152	Gene ID= ENSG00000081791.8 TPM= 13.7 Transcript Type= NA
chr5	141923791	141940151	141923791	141940151	+	transcript3791.chr5.nnic@KIAA0141	transcript3791.chr5.nnic	protein_coding	141923791,141924581,141925410,141928151,141929582,141929989,141930178,141933259,141934240,141934494,141938521	141923972,141924695,141925527,141928298,141929740,141930074,141930274,141933401,141934398,141934586,141940151	Gene ID= ENSG00000081791.8 TPM= 11.58 Transcript Type= NA
chr5	141923791	141935491	141923791	141935491	+	transcript3794.chr5.nic@KIAA0141	transcript3794.chr5.nic	protein_coding	141923791,141924581,141925410,141928151,141929582,141929989,141930178,141933259,141934240,141934494	141923972,141924695,141925527,141928298,141929740,141930074,141930274,141933401,141934398,141935491	Gene ID= ENSG00000081791.8 TPM= 17.42 Transcript Type= NA
chr5	141923855	141940120	141923855	141940120	+	ENST00000194118.8@KIAA0141	ENST00000194118.8	protein_coding	141923855,141924581,141925410,141928151,141929582,141929989,141930178,141933259,141934240,141934494,141937198,141938521,141939554	141923972,141924695,141925527,141928298,141929740,141930074,141930274,141933401,141934398,141934586,141937357,141938760,141940120	Gene ID= ENSG00000081791.8 TPM= 4.67 Transcript Type= protein_coding
chr5	141943585	141959062	141943585	141959062	-	ENST00000231484.3@PCDH12	ENST00000231484.3	protein_coding	141954972,141951493,141949432,141943585	141959062,141951590,141949583,141945805	Gene ID= ENSG00000113555.5 TPM= 7.44 Transcript Type= protein_coding
chr5	141969039	141990291	141969039	141990291	+	ENST00000394520.6@RNF14	ENST00000394520.6	protein_coding	141969039,141970704,141973583,141974804,141978303,141980123,141983380,141984803,141987733	141969167,141970877,141973742,141974955,141978830,141980351,141983552,141984933,141990291	Gene ID= ENSG00000013561.17 TPM= 2.12 Transcript Type= protein_coding
chr5	141969162	141989185	141969162	141989185	+	transcript3812.chr5.nic@RNF14	transcript3812.chr5.nic	protein_coding	141969162,141970704,141973583,141974804,141978303,141980123,141983380,141984803,141987733	141969234,141970877,141973742,141974955,141978830,141980351,141983552,141984933,141989185	Gene ID= ENSG00000013561.17 TPM= 10.09 Transcript Type= NA
chr5	141968886	141990290	141968886	141990290	+	ENST00000347642.7@RNF14	ENST00000347642.7	protein_coding	141968886,141973583,141974804,141978303,141980123,141983380,141984803,141987733	141969167,141973742,141974955,141978830,141980351,141983552,141984933,141990290	Gene ID= ENSG00000013561.17 TPM= 4.25 Transcript Type= protein_coding
chr5	141969098	141989185	141969098	141989185	+	transcript3816.chr5.nnic@RNF14	transcript3816.chr5.nnic	protein_coding	141969098,141970704,141973583,141974804,141980123,141983380,141984803,141987733	141969167,141970877,141973742,141974955,141980351,141983552,141984933,141989185	Gene ID= ENSG00000013561.17 TPM= 3.19 Transcript Type= NA
chr5	141969105	141989185	141969105	141989185	+	transcript3825.chr5.nnic@RNF14	transcript3825.chr5.nnic	protein_coding	141969105,141973583,141974804,141980123,141983380,141984803,141987733	141969167,141973742,141974955,141980351,141983552,141984933,141989185	Gene ID= ENSG00000013561.17 TPM= 3.19 Transcript Type= NA
chr5	141969035	141989185	141969035	141989185	+	transcript3826.chr5.nic@RNF14	transcript3826.chr5.nic	protein_coding	141969035,141973583,141978303,141980123,141983380,141984803,141987733	141969167,141973742,141978830,141980351,141983552,141984933,141989185	Gene ID= ENSG00000013561.17 TPM= 3.19 Transcript Type= NA
chr5	141969162	141989185	141969162	141989185	+	transcript3837.chr5.nic@RNF14	transcript3837.chr5.nic	protein_coding	141969162,141970704,141973583,141983380,141984803,141987733	141969234,141970877,141973742,141983552,141984933,141989185	Gene ID= ENSG00000013561.17 TPM= 4.25 Transcript Type= NA
chr5	141969111	141989185	141969111	141989185	+	ENST00000394514.6@RNF14	ENST00000394514.6	protein_coding	141969111,141970704,141973583,141978303,141980123,141983380,141984803,141987733	141969167,141970877,141973742,141978830,141980351,141983552,141984933,141989185	Gene ID= ENSG00000013561.17 TPM= 14.87 Transcript Type= protein_coding
chr5	142000669	142013031	142000669	142013031	-	ENST00000311337.10@GNPDA1	ENST00000311337.10	protein_coding	142012995,142011912,142007799,142006144,142004932,142003088,142000669	142013031,142012041,142007900,142006326,142005116,142003262,142002129	Gene ID= ENSG00000113552.15 TPM= 35.05 Transcript Type= protein_coding
chr5	142108505	142154443	142108505	142154443	+	ENST00000253814.5@NDFIP1	ENST00000253814.5	protein_coding	142108505,142131808,142132212,142135730,142137734,142140563,142144571,142151731	142109037,142131895,142132342,142135817,142137858,142140629,142144676,142154443	Gene ID= ENSG00000131507.10 TPM= 27.62 Transcript Type= protein_coding
chr5	142592179	142685703	142592179	142685703	-	ENST00000619447.4@FGF1	ENST00000619447.4	protein_coding	142685499,142613959,142600702,142592179	142685703,142614161,142600805,142595484	Gene ID= ENSG00000113578.17 TPM= 14.52 Transcript Type= protein_coding
chr5	142592179	142698070	142592179	142698070	-	ENST00000621536.4@FGF1	ENST00000621536.4	protein_coding	142697622,142613959,142600702,142592179	142698070,142614161,142600805,142595484	Gene ID= ENSG00000113578.17 TPM= 28.33 Transcript Type= protein_coding
chr5	142592181	142698057	142592181	142698057	-	transcript3860.chr5.nic@FGF1	transcript3860.chr5.nic	protein_coding	142697913,142697622,142613959,142592181	142698057,142697715,142614161,142595484	Gene ID= ENSG00000113578.17 TPM= 16.64 Transcript Type= NA
chr5	143226276	143228687	143226276	143228687	+	transcript3877.chr5.nnic@NA	transcript3877.chr5.nnic	NA	143226276	143228687	Gene ID= novel_gene_chr5_3878 TPM= 4.25 Transcript Type= NA
chr5	143281120	143403036	143281120	143403036	-	transcript3879.chr5.nic@NR3C1	transcript3879.chr5.nic	protein_coding	143402602,143399656,143314002,143310097,143300485,143298668,143295460,143282568,143281120	143403036,143400852,143314168,143310213,143300763,143298812,143295590,143282725,143282041	Gene ID= ENSG00000113580.14 TPM= 9.03 Transcript Type= NA
chr5	143309074	143403640	143309074	143403640	-	transcript3885.chr5.nic@NR3C1	transcript3885.chr5.nic	protein_coding	143403211,143399656,143314002,143309074	143403640,143400852,143314168,143310213	Gene ID= ENSG00000113580.14 TPM= 3.54 Transcript Type= NA
chr5	143281811	143404544	143281811	143404544	-	ENST00000503201.1@NR3C1	ENST00000503201.1	protein_coding	143404376,143399656,143314002,143310097,143300485,143298668,143295460,143282568,143281811	143404544,143400852,143314168,143310213,143300763,143298812,143295590,143282725,143282041	Gene ID= ENSG00000113580.14 TPM= 4.25 Transcript Type= protein_coding
chr5	143398357	143403669	143398357	143403669	-	transcript3894.chr5.nic@NR3C1	transcript3894.chr5.nic	protein_coding	143403211,143398357	143403669,143400852	Gene ID= ENSG00000113580.14 TPM= 15.4 Transcript Type= NA
chr5	143398357	143404535	143398357	143404535	-	transcript3895.chr5.nic@NR3C1	transcript3895.chr5.nic	protein_coding	143404376,143398357	143404535,143400852	Gene ID= ENSG00000113580.14 TPM= 4.78 Transcript Type= NA
chr5	143281162	143403689	143281162	143403689	-	ENST00000231509.7@NR3C1	ENST00000231509.7	protein_coding	143403211,143399656,143313999,143310097,143300485,143298668,143295460,143282568,143281162	143403689,143400852,143314168,143310213,143300763,143298812,143295590,143282725,143282041	Gene ID= ENSG00000113580.14 TPM= 49.21 Transcript Type= protein_coding
chr5	143403314	143404238	143403314	143404238	-	transcript3898.chr5.nnic@NA	transcript3898.chr5.nnic	NA	143403314	143404238	Gene ID= novel_gene_chr5_3899 TPM= 6.37 Transcript Type= NA
chr5	144158159	144170659	144158159	144170659	-	ENST00000274496.9@YIPF5	ENST00000274496.9	protein_coding	144170535,144169846,144165432,144164111,144162218,144158159	144170659,144169965,144165604,144164256,144162399,144160559	Gene ID= ENSG00000145817.16 TPM= 29.74 Transcript Type= protein_coding
chr5	144159273	144170630	144159273	144170630	-	ENST00000448443.6@YIPF5	ENST00000448443.6	protein_coding	144170284,144169846,144165432,144164111,144162218,144159273	144170630,144169965,144165604,144164256,144162399,144160559	Gene ID= ENSG00000145817.16 TPM= 1.06 Transcript Type= protein_coding
chr5	145759872	145835374	145759872	145835374	-	transcript3913.chr5.nic@PRELID2	transcript3913.chr5.nic	protein_coding	145835177,145823077,145819945,145817894,145796442,145764931,145759872	145835374,145823134,145820018,145818054,145796547,145765000,145760525	Gene ID= ENSG00000186314.11 TPM= 2.12 Transcript Type= NA
chr5	145936579	146063316	145936579	146063316	+	ENST00000359120.8@SH3RF2	ENST00000359120.8	protein_coding	145936579,145937823,146000058,146004058,146013747,146047772,146049075,146055981,146059866,146062426	145936694,145938306,146000327,146004153,146014061,146047863,146049245,146056213,146060224,146063316	Gene ID= ENSG00000156463.17 TPM= 1.59 Transcript Type= protein_coding
chr5	146059747	146062781	146059747	146062781	+	transcript3927.chr5.nic@SH3RF2	transcript3927.chr5.nic	protein_coding	146059747,146062426	146060224,146062781	Gene ID= ENSG00000156463.17 TPM= 456.73 Transcript Type= NA
chr5	146059825	146063316	146059825	146063316	+	transcript3928.chr5.nic@SH3RF2	transcript3928.chr5.nic	protein_coding	146059825,146062426	146060224,146063316	Gene ID= ENSG00000156463.17 TPM= 567.19 Transcript Type= NA
chr5	146059747	146063880	146059747	146063880	+	transcript3929.chr5.nic@SH3RF2	transcript3929.chr5.nic	protein_coding	146059747,146062426	146060224,146063880	Gene ID= ENSG00000156463.17 TPM= 83.38 Transcript Type= NA
chr5	146065926	146069542	146065926	146069542	+	transcript3935.chr5.nnic@NA	transcript3935.chr5.nnic	NA	146065926	146069542	Gene ID= novel_gene_chr5_3936 TPM= 3.19 Transcript Type= NA
chr5	146160402	146182672	146160402	146182672	-	transcript3949.chr5.nic@LARS	transcript3949.chr5.nic	protein_coding	146182488,146177547,146172687,146171910,146168128,146164460,146164310,146160402	146182672,146177665,146172774,146171990,146168265,146164471,146164458,146160486	Gene ID= ENSG00000133706.17 TPM= 2.12 Transcript Type= NA
chr5	146113038	146182660	146113038	146182660	-	ENST00000394434.6@LARS	ENST00000394434.6	protein_coding	146182488,146177547,146172687,146171910,146168128,146164310,146160374,146159407,146157728,146157403,146153893,146153734,146153174,146151862,146149622,146144624,146144472,146144267,146143412,146142872,146140204,146135601,146132898,146131019,146130018,146128978,146128672,146126435,146123982,146122492,146120371,146113038	146182660,146177665,146172774,146171990,146168265,146164471,146160486,146159470,146157795,146157628,146153980,146153810,146153227,146152002,146149699,146144709,146144537,146144349,146143550,146143084,146140261,146135664,146133081,146131109,146130158,146129118,146128782,146126545,146124086,146122587,146120503,146114311	Gene ID= ENSG00000133706.17 TPM= 13.81 Transcript Type= protein_coding
chr5	146203558	146284707	146203558	146284707	+	transcript3953.chr5.nic@RBM27	transcript3953.chr5.nic	protein_coding	146203558,146218985,146223403,146228946,146229717,146230657,146233450,146237298,146251711,146254943,146258449,146260745,146261510,146263491,146267649,146269207,146269420,146270954,146271483,146284622	146203824,146219103,146223527,146229037,146229910,146230917,146233743,146237432,146251875,146255092,146258593,146260898,146261806,146263631,146267768,146269281,146269584,146271058,146271674,146284707	Gene ID= ENSG00000091009.7 TPM= 2.12 Transcript Type= NA
chr5	146287129	146289210	146287129	146289210	+	transcript3957.chr5.nnic@NA	transcript3957.chr5.nnic	NA	146287129	146289210	Gene ID= novel_gene_chr5_3958 TPM= 2.12 Transcript Type= NA
chr5	146447312	146511961	146447312	146511961	+	ENST00000296702.9@TCERG1	ENST00000296702.9	protein_coding	146447312,146455056,146457183,146458884,146463551,146468341,146469544,146470636,146471488,146478493,146479855,146480028,146482592,146483540,146492920,146498536,146503375,146503824,146507028,146507873,146509145,146510441	146447408,146455281,146457335,146459337,146463793,146468403,146469744,146470748,146471576,146478653,146479911,146480094,146482727,146483629,146493038,146498686,146503539,146504006,146507207,146507956,146509245,146511961	Gene ID= ENSG00000113649.11 TPM= 2.66 Transcript Type= protein_coding
chr5	146447311	146503539	146447311	146503539	+	transcript3964.chr5.nic@TCERG1	transcript3964.chr5.nic	protein_coding	146447311,146455056,146457183,146458884,146463551,146469544,146470636,146471488,146478493,146479855,146480028,146482592,146483540,146492920,146498536,146503375	146447408,146455281,146457335,146459337,146463793,146469744,146470748,146471576,146478653,146479911,146480094,146482727,146483629,146493038,146498686,146503539	Gene ID= ENSG00000113649.11 TPM= 2.66 Transcript Type= NA
chr5	146447311	146480216	146447311	146480216	+	ENST00000507175.5@TCERG1	ENST00000507175.5	protein_coding	146447311,146455056,146457183,146458884,146463551,146469544,146470636,146471488,146478493,146479855,146480028	146447408,146455281,146457335,146459337,146463793,146469744,146470748,146471576,146478653,146479911,146480216	Gene ID= ENSG00000113649.11 TPM= 7.44 Transcript Type= retained_intron
chr5	146589507	146878765	146589507	146878765	-	ENST00000394411.8@PPP2R2B	ENST00000394411.8	protein_coding	146878591,146878002,146701045,146697979,146691128,146650547,146638251,146600291,146592971,146589507	146878765,146878195,146701142,146698144,146691240,146650724,146638415,146600460,146593062,146590226	Gene ID= ENSG00000156475.18 TPM= 4.25 Transcript Type= protein_coding
chr5	146589504	146878894	146589504	146878894	-	ENST00000530902.5@PPP2R2B	ENST00000530902.5	protein_coding	146878701,146878002,146701045,146697979,146691128,146650547,146638251,146600291,146592971,146589504	146878894,146878195,146701142,146698144,146691240,146650724,146638415,146600460,146593062,146590226	Gene ID= ENSG00000156475.18 TPM= 5.31 Transcript Type= processed_transcript
chr5	146581146	146878642	146581146	146878642	-	ENST00000394409.7@PPP2R2B	ENST00000394409.7	protein_coding	146878002,146701045,146697979,146691128,146650547,146638251,146600291,146592971,146581146	146878642,146701142,146698144,146691240,146650724,146638415,146600460,146593062,146590226	Gene ID= ENSG00000156475.18 TPM= 2.12 Transcript Type= protein_coding
chr5	147390811	147453959	147390811	147453959	-	ENST00000398514.7@DPYSL3	ENST00000398514.7	protein_coding	147453549,147424875,147418447,147415709,147413596,147412608,147408728,147405610,147401540,147400692,147399082,147397666,147395559,147390811	147453959,147424963,147418631,147415873,147413657,147412688,147408796,147405730,147401696,147400833,147399252,147397845,147395721,147394123	Gene ID= ENSG00000113657.12 TPM= 31.33 Transcript Type= protein_coding
chr5	147390812	147510056	147390812	147510056	-	ENST00000343218.9@DPYSL3	ENST00000343218.9	protein_coding	147509478,147424875,147418447,147415709,147413596,147412608,147408728,147405610,147401540,147400692,147399082,147397666,147395559,147390812	147510056,147424963,147418631,147415873,147413657,147412688,147408796,147405730,147401696,147400833,147399252,147397845,147395721,147394123	Gene ID= ENSG00000113657.12 TPM= 17.53 Transcript Type= protein_coding
chr5	147886084	147906538	147886084	147906538	-	transcript3978.chr5.nnic@C5orf46	transcript3978.chr5.nnic	protein_coding	147906432,147901629,147886084	147906538,147901773,147890224	Gene ID= ENSG00000178776.4 TPM= 2.12 Transcript Type= NA
chr5	147901308	147906538	147901308	147906538	-	ENST00000515291.1@C5orf46	ENST00000515291.1	protein_coding	147906432,147901308	147906538,147901773	Gene ID= ENSG00000178776.4 TPM= 11.68 Transcript Type= protein_coding
chr5	148307388	148383747	148307388	148383747	-	transcript3981.chr5.nic@AC091948.1	transcript3981.chr5.nic	antisense_RNA	148383499,148378702,148307388	148383747,148378845,148308165	Gene ID= ENSG00000247199.3 TPM= 3.19 Transcript Type= NA
chr5	148377584	148383837	148377584	148383837	-	transcript3983.chr5.nic@AC091948.1	transcript3983.chr5.nic	antisense_RNA	148383499,148377584	148383837,148378845	Gene ID= ENSG00000247199.3 TPM= 3.19 Transcript Type= NA
chr5	148383935	148442836	148383935	148442836	+	ENST00000340253.9@FBXO38	ENST00000340253.9	protein_coding	148383935,148394714,148398999,148401982,148402348,148404685,148406257,148409124,148410635,148414136,148415928,148416994,148423998,148425522,148427213,148433424,148433635,148438332,148439647,148440424,148441124,148441969	148384039,148394904,148399132,148402145,148402513,148404822,148406394,148409217,148410765,148414306,148416070,148417204,148424117,148425701,148427947,148433524,148433737,148438498,148439792,148440527,148441237,148442836	Gene ID= ENSG00000145868.16 TPM= 7.44 Transcript Type= protein_coding
chr5	148452872	148559984	148452872	148559984	+	transcript3990.chr5.nnic@NA	transcript3990.chr5.nnic	NA	148452872,148468920,148477377,148550085,148559575	148453172,148469017,148477538,148550351,148559984	Gene ID= novel_gene_chr5_3991 TPM= 2.12 Transcript Type= NA
chr5	148826611	148876184	148826611	148876184	+	transcript3996.chr5.nnic@ADRB2	transcript3996.chr5.nnic	protein_coding	148826611,148872504,148874512	148828005,148872589,148876184	Gene ID= ENSG00000169252.5 TPM= 2.12 Transcript Type= NA
chr5	149141490	149260439	149141490	149260439	+	transcript4003.chr5.nic@ABLIM3	transcript4003.chr5.nic	protein_coding	149141490,149142009,149183452,149198219,149200316,149207008,149210726,149216959,149230649,149233229,149237448,149239248,149239759,149242491,149244881,149246482,149247782,149249815,149250447,149251359,149252201,149252757,149258291	149141654,149142108,149183589,149198402,149200428,149207134,149210819,149217046,149230707,149233300,149237603,149239277,149239888,149242538,149245015,149246546,149247929,149249844,149250505,149251419,149252208,149252837,149260439	Gene ID= ENSG00000173210.19 TPM= 14.34 Transcript Type= NA
chr5	149141483	149260542	149141483	149260542	+	ENST00000326685.11@ABLIM3	ENST00000326685.11	protein_coding	149141483,149142009,149183452,149198219,149200316,149207008,149210726,149216959,149230649,149233229,149239759,149242491,149244881,149246482,149247782,149249815,149250447,149251359,149252201,149252757,149258291	149141654,149142108,149183589,149198402,149200428,149207134,149210819,149217046,149230707,149233300,149239888,149242538,149245015,149246546,149247929,149249844,149250505,149251419,149252208,149252837,149260542	Gene ID= ENSG00000173210.19 TPM= 1.59 Transcript Type= protein_coding
chr5	149141490	149205108	149141490	149205108	+	transcript4014.chr5.nnic@ABLIM3	transcript4014.chr5.nnic	protein_coding	149141490,149142009,149183452,149198219,149200316,149202772	149141654,149142108,149183589,149198402,149200428,149205108	Gene ID= ENSG00000173210.19 TPM= 3.19 Transcript Type= NA
chr5	149141503	149260439	149141503	149260439	+	ENST00000309868.11@ABLIM3	ENST00000309868.11	protein_coding	149141503,149142009,149183452,149198219,149200316,149207008,149210726,149216959,149230649,149233229,149237448,149239248,149239759,149240676,149242491,149244881,149246482,149247782,149249815,149250447,149251359,149252201,149252757,149258291	149141654,149142108,149183589,149198402,149200428,149207134,149210819,149217046,149230707,149233300,149237603,149239277,149239888,149240774,149242538,149245015,149246546,149247929,149249844,149250505,149251419,149252208,149252837,149260439	Gene ID= ENSG00000173210.19 TPM= 8.5 Transcript Type= protein_coding
chr5	149271871	149291545	149271871	149291545	+	transcript4040.chr5.nnic@AFAP1L1	transcript4040.chr5.nnic	protein_coding	149271871,149288484	149271984,149291545	Gene ID= ENSG00000157510.13 TPM= 2.12 Transcript Type= NA
chr5	149271871	149292285	149271871	149292285	+	transcript4041.chr5.nnic@AFAP1L1	transcript4041.chr5.nnic	protein_coding	149271871,149288484	149271984,149292285	Gene ID= ENSG00000157510.13 TPM= 3.19 Transcript Type= NA
chr5	149271871	149341802	149271871	149341802	+	ENST00000296721.8@AFAP1L1	ENST00000296721.8	protein_coding	149271871,149299509,149300271,149301133,149302418,149306306,149307402,149309956,149312112,149315821,149316151,149317729,149319582,149320391,149322606,149329666,149332695,149335594,149340007	149271984,149299637,149300354,149301230,149302526,149306404,149307613,149310135,149312204,149315914,149316303,149317940,149319727,149320463,149322717,149329830,149332873,149335722,149341802	Gene ID= ENSG00000157510.13 TPM= 24.43 Transcript Type= protein_coding
chr5	149271871	149312375	149271871	149312375	+	ENST00000455574.6@AFAP1L1	ENST00000455574.6	protein_coding	149271871,149299509,149300271,149301133,149302418,149306306,149307402,149309956,149312112	149271984,149299637,149300354,149301230,149302526,149306404,149307613,149310135,149312375	Gene ID= ENSG00000157510.13 TPM= 1.06 Transcript Type= retained_intron
chr5	149280473	149283716	149280473	149283716	-	transcript4042.chr5.nnic@NA	transcript4042.chr5.nnic	NA	149280473	149283716	Gene ID= novel_gene_chr5_4043 TPM= 2.12 Transcript Type= NA
chr5	149345430	149354583	149345430	149354583	+	ENST00000329271.7@GRPEL2	ENST00000329271.7	protein_coding	149345430,149348272,149349654,149350918	149345616,149348425,149349735,149354583	Gene ID= ENSG00000164284.14 TPM= 5.31 Transcript Type= protein_coding
chr5	149345619	149354583	149345619	149354583	+	ENST00000507562.1@GRPEL2	ENST00000507562.1	protein_coding	149345619,149348272,149349654,149350918	149345825,149348425,149349735,149354583	Gene ID= ENSG00000164284.14 TPM= 5.31 Transcript Type= processed_transcript
chr5	149358007	149369653	149358007	149369653	+	ENST00000274569.8@PCYOX1L	ENST00000274569.8	protein_coding	149358007,149362637,149364036,149365942,149367360,149367993	149358156,149362843,149364210,149366153,149367500,149369653	Gene ID= ENSG00000145882.10 TPM= 9.56 Transcript Type= protein_coding
chr5	149406877	149425662	149406877	149425662	+	ENST00000519898.5@CARMN	ENST00000519898.5	lincRNA	149406877,149421481,149424090,149425097	149407078,149421601,149424397,149425662	Gene ID= ENSG00000249669.9 TPM= 1.06 Transcript Type= lincRNA
chr5	149406881	149412617	149406881	149412617	+	transcript4054.chr5.nnic@NA	transcript4054.chr5.nnic	NA	149406881	149412617	Gene ID= novel_gene_chr5_4055 TPM= 9.56 Transcript Type= NA
chr5	149417685	149419593	149417685	149419593	+	transcript4056.chr5.nnic@NA	transcript4056.chr5.nnic	NA	149417685	149419593	Gene ID= novel_gene_chr5_4057 TPM= 2.12 Transcript Type= NA
chr5	149429001	149432834	149429001	149432834	+	transcript4058.chr5.nnic@NA	transcript4058.chr5.nnic	NA	149429001	149432834	Gene ID= novel_gene_chr5_4059 TPM= 22.31 Transcript Type= NA
chr5	149492197	149551397	149492197	149551397	-	ENST00000261798.9@CSNK1A1	ENST00000261798.9	protein_coding	149550842,149550075,149525045,149520290,149513070,149511794,149509879,149507027,149505483,149492197	149551397,149550181,149525171,149520388,149513209,149511872,149509953,149507133,149505595,149496860	Gene ID= ENSG00000113712.17 TPM= 16.64 Transcript Type= protein_coding
chr5	149495896	149551552	149495896	149551552	-	ENST00000377843.6@CSNK1A1	ENST00000377843.6	protein_coding	149550842,149550075,149525045,149520290,149513070,149511794,149509879,149507027,149505447,149495896	149551552,149550181,149525171,149520388,149513209,149511872,149509953,149507133,149505595,149496860	Gene ID= ENSG00000113712.17 TPM= 10.62 Transcript Type= protein_coding
chr5	149494314	149504670	149494314	149504670	-	ENST00000499521.2@AC021078.1	ENST00000499521.2	processed_transcript	149501015,149494314	149504670,149499293	Gene ID= ENSG00000230551.4 TPM= 1.06 Transcript Type= retained_intron
chr5	149526604	149530976	149526604	149530976	+	transcript4102.chr5.nnic@NA	transcript4102.chr5.nnic	NA	149526604	149530976	Gene ID= novel_gene_chr5_4103 TPM= 6.37 Transcript Type= NA
chr5	149581348	149634968	149581348	149634968	+	transcript4108.chr5.nnic@ARHGEF37	transcript4108.chr5.nnic	protein_coding	149581348,149601108,149609548,149616567,149618176,149618938,149620354,149621733,149624012,149627076,149628809,149631982	149581624,149601231,149609695,149616766,149618306,149619042,149620464,149622062,149624140,149627271,149628966,149634968	Gene ID= ENSG00000183111.11 TPM= 9.56 Transcript Type= NA
chr5	149581348	149620101	149581348	149620101	+	transcript4112.chr5.nnic@ARHGEF37	transcript4112.chr5.nnic	protein_coding	149581348,149601108,149609548,149616567,149618176,149618938	149581624,149601231,149609695,149616766,149618306,149620101	Gene ID= ENSG00000183111.11 TPM= 2.12 Transcript Type= NA
chr5	149581473	149634968	149581473	149634968	+	ENST00000333677.6@ARHGEF37	ENST00000333677.6	protein_coding	149581473,149597759,149601108,149609548,149616567,149618176,149618938,149620354,149621733,149624012,149627076,149628809,149631982	149581624,149597955,149601231,149609695,149616766,149618306,149619042,149620464,149622062,149624140,149627271,149628966,149634968	Gene ID= ENSG00000183111.11 TPM= 18.06 Transcript Type= protein_coding
chr5	149778460	149781218	149778460	149781218	+	transcript4120.chr5.nnic@NA	transcript4120.chr5.nnic	NA	149778460	149781218	Gene ID= novel_gene_chr5_4121 TPM= 3.19 Transcript Type= NA
chr5	149799695	149802060	149799695	149802060	-	transcript4122.chr5.nnic@NA	transcript4122.chr5.nnic	NA	149799695	149802060	Gene ID= novel_gene_chr5_4123 TPM= 5.31 Transcript Type= NA
chr5	149993118	150001167	149993118	150001167	-	ENST00000296736.3@TIGD6	ENST00000296736.3	protein_coding	150000474,149993118	150001167,149996429	Gene ID= ENSG00000164296.6 TPM= 1.06 Transcript Type= protein_coding
chr5	149999842	150000596	149999842	150000596	-	transcript4132.chr5.nnic@NA	transcript4132.chr5.nnic	NA	149999842	150000596	Gene ID= novel_gene_chr5_4133 TPM= 2.12 Transcript Type= NA
chr5	150000046	150053142	150000046	150053142	+	ENST00000613459.4@HMGXB3	ENST00000613459.4	protein_coding	150000046,150000454,150004851,150006473,150010111,150012255,150018566,150024262,150026706,150027020,150030741,150032454,150036636,150037400,150040748,150041785,150045466,150047624,150048569,150050252,150051725	150000055,150001179,150004989,150006647,150010608,150012353,150018697,150024680,150026881,150027117,150030839,150032603,150036937,150037527,150040879,150041969,150045685,150047757,150048685,150050461,150053142	Gene ID= ENSG00000113716.12 TPM= 26.55 Transcript Type= protein_coding
chr5	150019126	150019267	150019126	150019267	-	transcript4139.chr5.nnic@NA	transcript4139.chr5.nnic	NA	150019126	150019267	Gene ID= novel_gene_chr5_4140 TPM= 2.12 Transcript Type= NA
chr5	150053291	150113372	150053291	150113372	-	ENST00000286301.7@CSF1R	ENST00000286301.7	protein_coding	150113261,150086379,150080767,150080052,150078112,150077276,150073301,150070456,150070182,150069873,150068215,150061723,150061491,150060862,150059700,150057504,150057287,150056219,150056026,150055237,150054322,150053291	150113372,150086607,150081024,150080336,150078248,150077435,150073493,150070571,150070302,150070063,150068330,150061849,150061595,150060972,150059862,150057592,150057384,150056341,150056137,150055336,150054430,150054224	Gene ID= ENSG00000182578.13 TPM= 5.31 Transcript Type= protein_coding
chr5	150113837	150155860	150113837	150155860	-	ENST00000261799.8@PDGFRB	ENST00000261799.8	protein_coding	150155397,150137008,150135555,150134750,150133881,150133586,150132750,150131979,150130539,150129757,150126520,150125445,150124727,150124250,150123042,150121880,150121204,150120888,150120012,150119467,150118747,150117618,150113837	150155860,150137053,150135878,150135016,150134008,150133760,150132942,150132094,150130662,150129968,150126614,150125577,150124831,150124360,150123201,150122040,150121322,150121010,150120123,150119566,150118852,150117850,150115946	Gene ID= ENSG00000113721.13 TPM= 28.68 Transcript Type= protein_coding
chr5	150113837	150127859	150113837	150127859	-	transcript4147.chr5.nnic@PDGFRB	transcript4147.chr5.nnic	protein_coding	150126520,150125445,150124727,150124250,150123050,150121880,150121204,150120888,150120012,150119467,150118747,150117618,150113837	150127859,150125577,150124834,150124360,150123203,150122046,150121322,150121010,150120125,150119566,150118852,150117852,150115946	Gene ID= ENSG00000113721.13 TPM= 25.67 Transcript Type= NA
chr5	150113837	150127859	150113837	150127859	-	transcript4148.chr5.nnic@PDGFRB	transcript4148.chr5.nnic	protein_coding	150125445,150124727,150124250,150123050,150121880,150121204,150120888,150120012,150119467,150118747,150117618,150113837	150127859,150124834,150124360,150123203,150122046,150121322,150121010,150120125,150119566,150118852,150117852,150115946	Gene ID= ENSG00000113721.13 TPM= 38.95 Transcript Type= NA
chr5	150113837	150127859	150113837	150127859	-	transcript4149.chr5.nnic@PDGFRB	transcript4149.chr5.nnic	protein_coding	150126520,150125445,150124727,150123050,150121880,150121204,150120888,150120012,150119467,150118747,150117618,150113837	150127859,150125577,150124834,150124360,150122046,150121322,150121010,150120125,150119566,150118852,150117852,150115946	Gene ID= ENSG00000113721.13 TPM= 22.49 Transcript Type= NA
chr5	150221179	150245521	150221179	150245521	-	transcript4153.chr5.nic@CAMK2A	transcript4153.chr5.nic	protein_coding	150245161,150239704,150238700,150231305,150228192,150222989,150221179	150245521,150239736,150238748,150231380,150228286,150223217,150222713	Gene ID= ENSG00000070808.15 TPM= 3.19 Transcript Type= NA
chr5	150357639	150400307	150357639	150400307	+	ENST00000377797.7@TCOF1	ENST00000377797.7	protein_coding	150357639,150361156,150364113,150367844,150368716,150369529,150372006,150374174,150374617,150374954,150375339,150375721,150376082,150376423,150378905,150379229,150379532,150387902,150389887,150391544,150391957,150392708,150393372,150396282,150398354,150399022,150399810	150357854,150361211,150364252,150367917,150368902,150369602,150372236,150374386,150374811,150375163,150375554,150375909,150376330,150376620,150379042,150379408,150379732,150388088,150390023,150391657,150392176,150392790,150393552,150396842,150398451,150399070,150400307	Gene ID= ENSG00000070814.17 TPM= 2.12 Transcript Type= protein_coding
chr5	150357667	150384249	150357667	150384249	+	transcript4169.chr5.nic@TCOF1	transcript4169.chr5.nic	protein_coding	150357667,150361156,150364113,150367844,150368716,150369529,150374174,150374617,150374954,150375339,150375721,150376082,150376423,150378905,150379229,150379532,150383738	150357854,150361211,150364252,150367917,150368902,150369602,150374386,150374811,150375163,150375554,150375909,150376330,150376620,150379042,150379408,150379732,150384249	Gene ID= ENSG00000070814.17 TPM= 2.12 Transcript Type= NA
chr5	150357719	150398369	150357719	150398369	+	ENST00000427724.6@TCOF1	ENST00000427724.6	protein_coding	150357719,150361156,150364113,150367844,150368716,150369529,150372006,150374174,150374617,150374954,150375339,150375721,150376082,150376423,150378905,150379229,150379532,150387902,150389887,150391957,150392708,150393372,150396282,150398354	150357854,150361211,150364252,150367917,150368902,150369602,150372236,150374386,150374811,150375163,150375554,150375909,150376330,150376620,150379042,150379408,150379732,150388088,150390023,150392176,150392790,150393552,150396842,150398369	Gene ID= ENSG00000070814.17 TPM= 1.06 Transcript Type= protein_coding
chr5	150444231	150449756	150444231	150449756	-	ENST00000407193.5@RPS14	ENST00000407193.5	protein_coding	150449486,150447585,150446802,150445609,150444231	150449756,150447735,150446963,150445685,150444353	Gene ID= ENSG00000164587.11 TPM= 38.24 Transcript Type= protein_coding
chr5	150444238	150449696	150444238	150449696	-	ENST00000312037.5@RPS14	ENST00000312037.5	protein_coding	150449492,150447585,150446802,150445609,150444238	150449696,150447735,150446963,150445685,150444353	Gene ID= ENSG00000164587.11 TPM= 39.3 Transcript Type= protein_coding
chr5	150443190	150449747	150443190	150449747	-	ENST00000401695.7@RPS14	ENST00000401695.7	protein_coding	150449703,150447585,150446802,150445609,150443190	150449747,150447735,150446963,150445685,150444353	Gene ID= ENSG00000164587.11 TPM= 2.12 Transcript Type= protein_coding
chr5	150485770	150554268	150485770	150554268	+	transcript4187.chr5.nnic@NDST1	transcript4187.chr5.nnic	protein_coding	150485770,150520868,150527804,150532945,150534867,150535700,150539228,150540082,150541570,150542848,150545312,150548218,150549678,150551753,150553213	150486023,150521767,150528298,150533032,150535021,150535885,150539356,150540264,150541666,150542971,150545486,150548388,150549787,150551855,150554268	Gene ID= ENSG00000070614.14 TPM= 5.52 Transcript Type= NA
chr5	150486282	150554368	150486282	150554368	+	transcript4190.chr5.nic@NDST1	transcript4190.chr5.nic	protein_coding	150486282,150520868,150527804,150532945,150534867,150535700,150539228,150540082,150541570,150542848,150545312,150548218,150549678,150551753,150553213	150486407,150521767,150528298,150533032,150535021,150535885,150539356,150540264,150541666,150542971,150545486,150548388,150549787,150551855,150554368	Gene ID= ENSG00000070614.14 TPM= 6.59 Transcript Type= NA
chr5	150485770	150539772	150485770	150539772	+	transcript4196.chr5.nnic@NDST1	transcript4196.chr5.nnic	protein_coding	150485770,150520868,150527804,150532945,150534867,150535700,150539228	150486023,150521767,150528298,150533032,150535021,150535885,150539772	Gene ID= ENSG00000070614.14 TPM= 5.87 Transcript Type= NA
chr5	150486223	150539772	150486223	150539772	+	transcript4198.chr5.nic@NDST1	transcript4198.chr5.nic	protein_coding	150486223,150520868,150527804,150532945,150534867,150535700,150539228	150486407,150521767,150528298,150533032,150535021,150535885,150539772	Gene ID= ENSG00000070614.14 TPM= 6.94 Transcript Type= NA
chr5	150624641	150652339	150624641	150652339	+	transcript4206.chr5.nnic@SYNPO	transcript4206.chr5.nnic	protein_coding	150624641,150647944	150624907,150652339	Gene ID= ENSG00000171992.12 TPM= 1065.35 Transcript Type= NA
chr5	150640678	150652337	150640678	150652337	+	ENST00000519664.1@SYNPO	ENST00000519664.1	protein_coding	150640678,150647944	150640854,150652337	Gene ID= ENSG00000171992.12 TPM= 1051.54 Transcript Type= protein_coding
chr5	150626314	150633967	150626314	150633967	+	transcript4209.chr5.nnic@NA	transcript4209.chr5.nnic	NA	150626314	150633967	Gene ID= novel_gene_chr5_4210 TPM= 4.25 Transcript Type= NA
chr5	150641004	150643520	150641004	150643520	+	transcript4213.chr5.nnic@NA	transcript4213.chr5.nnic	NA	150641004	150643520	Gene ID= novel_gene_chr5_4214 TPM= 2.12 Transcript Type= NA
chr5	150660882	150679365	150660882	150679365	+	ENST00000297130.4@MYOZ3	ENST00000297130.4	protein_coding	150660882,150662941,150670484,150671597,150671755,150672340,150676707	150661079,150663002,150670638,150671650,150671908,150672502,150679365	Gene ID= ENSG00000164591.13 TPM= 10.62 Transcript Type= protein_coding
chr5	150690794	150701107	150690794	150701107	-	ENST00000199814.8@RBM22	ENST00000199814.8	protein_coding	150700932,150700444,150699242,150698499,150696791,150696533,150695506,150694076,150693219,150692895,150690794	150701107,150700497,150699271,150698631,150696891,150696705,150695706,150694240,150693307,150693026,150691881	Gene ID= ENSG00000086589.11 TPM= 29.74 Transcript Type= protein_coding
chr5	150756641	150759040	150756641	150759040	-	transcript4226.chr5.nnic@NA	transcript4226.chr5.nnic	NA	150756641	150759040	Gene ID= novel_gene_chr5_4227 TPM= 2.12 Transcript Type= NA
chr5	150777946	150796734	150777946	150796734	+	ENST00000526627.1@SMIM3	ENST00000526627.1	protein_coding	150777946,150795430	150778972,150796734	Gene ID= ENSG00000256235.1 TPM= 27.62 Transcript Type= protein_coding
chr5	150930520	150946550	150930520	150946550	-	transcript4230.chr5.nnic@ZNF300P1	transcript4230.chr5.nnic	transcribed_unprocessed_pseudogene	150946306,150943814,150942550,150942218,150930520	150946550,150943872,150942676,150942313,150932290	Gene ID= ENSG00000197083.11 TPM= 3.19 Transcript Type= NA
chr5	151020563	151028993	151020563	151028993	+	ENST00000388825.8@GPX3	ENST00000388825.8	protein_coding	151020563,151025340,151026900,151027432,151027909	151020741,151025493,151027017,151027531,151028993	Gene ID= ENSG00000211445.11 TPM= 821.93 Transcript Type= protein_coding
chr5	151020589	151028987	151020589	151028987	+	ENST00000614343.4@GPX3	ENST00000614343.4	protein_coding	151020589,151025340,151026900,151027432,151027909,151028903	151020741,151025493,151027017,151027531,151028776,151028987	Gene ID= ENSG00000211445.11 TPM= 31.33 Transcript Type= protein_coding
chr5	151029949	151081438	151029949	151081438	-	transcript4233.chr5.nic@TNIP1	transcript4233.chr5.nic	protein_coding	151080880,151064960,151063613,151062127,151060318,151056766,151052165,151049824,151045861,151042896,151042540,151039097,151036790,151035582,151035002,151033608,151032287,151029949	151081438,151065131,151063747,151062212,151060395,151056957,151052259,151049947,151045950,151042961,151042671,151039225,151036921,151035707,151035067,151033799,151032400,151030673	Gene ID= ENSG00000145901.14 TPM= 8.94 Transcript Type= NA
chr5	151029947	151081084	151029947	151081084	-	ENST00000389378.6@TNIP1	ENST00000389378.6	protein_coding	151080880,151064960,151063613,151062127,151060318,151056766,151052165,151049824,151045861,151042896,151042540,151039097,151036790,151035582,151035002,151033608,151032287,151029947	151081084,151065131,151063747,151062212,151060395,151056957,151052259,151049947,151045950,151042961,151042671,151039225,151036921,151035707,151035067,151033799,151032400,151030747	Gene ID= ENSG00000145901.14 TPM= 99.23 Transcript Type= protein_coding
chr5	151029945	151081016	151029945	151081016	-	ENST00000520931.5@TNIP1	ENST00000520931.5	protein_coding	151080880,151063613,151062127,151060318,151056766,151052165,151049824,151045861,151042896,151042540,151039097,151036790,151035582,151035002,151033608,151032287,151029945	151081016,151063747,151062212,151060395,151056957,151052259,151049947,151045950,151042961,151042671,151039225,151036921,151035707,151035067,151033799,151032383,151030747	Gene ID= ENSG00000145901.14 TPM= 22.75 Transcript Type= protein_coding
chr5	151029947	151081084	151029947	151081084	-	ENST00000610535.4@TNIP1	ENST00000610535.4	protein_coding	151080880,151064960,151063613,151062127,151060318,151056766,151052165,151049824,151045861,151042896,151042540,151039097,151036790,151035582,151035002,151032287,151029947	151081084,151065131,151063747,151062212,151060395,151056957,151052259,151049947,151045950,151042961,151042671,151039225,151036921,151035707,151035067,151032383,151030747	Gene ID= ENSG00000145901.14 TPM= 2.92 Transcript Type= protein_coding
chr5	151061482	151066338	151061482	151066338	-	transcript4265.chr5.nnic@NA	transcript4265.chr5.nnic	NA	151061482	151066338	Gene ID= novel_gene_chr5_4266 TPM= 2.12 Transcript Type= NA
chr5	151091194	151157996	151091194	151157996	-	transcript4268.chr5.nnic@ANXA6	transcript4268.chr5.nnic	protein_coding	151157680,151147884,151140153,151139353,151138678,151137231,151136256,151134427,151133094,151132476,151131231,151129407,151128181,151126402,151124286,151122917,151122147,151119300,151117758,151117127,151110627,151109753,151108455,151105245,151103570,151101102,151091194	151157996,151147926,151140243,151139447,151138791,151137321,151136335,151134483,151133187,151132571,151131289,151129529,151128239,151126480,151124367,151123011,151122260,151119390,151117837,151117180,151110644,151109846,151108550,151105303,151103692,151101507,151091213	Gene ID= ENSG00000197043.13 TPM= 9.91 Transcript Type= NA
chr5	151101105	151157882	151101105	151157882	-	ENST00000354546.9@ANXA6	ENST00000354546.9	protein_coding	151157680,151147884,151140153,151139353,151138678,151137231,151136256,151134427,151133094,151132476,151131231,151129407,151128181,151126402,151124286,151122917,151122147,151119300,151117758,151117127,151110627,151109753,151108455,151105245,151103570,151101105	151157882,151147926,151140243,151139447,151138791,151137321,151136335,151134483,151133187,151132571,151131289,151129529,151128239,151126480,151124367,151123011,151122260,151119390,151117837,151117180,151110644,151109846,151108550,151105303,151103692,151101507	Gene ID= ENSG00000197043.13 TPM= 431.06 Transcript Type= protein_coding
chr5	151168311	151171196	151168311	151171196	+	transcript4298.chr5.nnic@NA	transcript4298.chr5.nnic	NA	151168311	151171196	Gene ID= novel_gene_chr5_4299 TPM= 22.31 Transcript Type= NA
chr5	151181052	151224145	151181052	151224145	-	ENST00000355417.6@CCDC69	ENST00000355417.6	protein_coding	151223923,151205400,151201582,151198997,151187386,151186023,151185422,151184344,151181052	151224145,151205475,151201688,151199084,151187459,151186124,151185541,151184441,151183614	Gene ID= ENSG00000198624.12 TPM= 140.21 Transcript Type= protein_coding
chr5	151252892	151270440	151252892	151270440	+	ENST00000357164.3@GM2A	ENST00000357164.3	protein_coding	151252892,151259755,151266731,151267296	151253297,151259916,151266913,151270440	Gene ID= ENSG00000196743.8 TPM= 3.72 Transcript Type= protein_coding
chr5	151268199	151272761	151268199	151272761	+	transcript4308.chr5.nnic@NA	transcript4308.chr5.nnic	NA	151268199	151272761	Gene ID= novel_gene_chr5_4309 TPM= 3.72 Transcript Type= NA
chr5	151661096	151687165	151661096	151687165	-	ENST00000231061.8@SPARC	ENST00000231061.8	protein_coding	151686865,151676132,151674612,151673129,151671573,151669664,151667467,151666361,151664087,151661096	151687165,151676201,151674674,151673216,151671694,151669784,151667600,151666509,151664235,151663599	Gene ID= ENSG00000113140.10 TPM= 74.35 Transcript Type= protein_coding
chr5	151742822	151772532	151742822	151772532	-	ENST00000524142.5@ATOX1	ENST00000524142.5	protein_coding	151772403,151758546,151751704,151746279,151742822	151772532,151758779,151751779,151746449,151742959	Gene ID= ENSG00000177556.11 TPM= 36.11 Transcript Type= protein_coding
chr5	151742823	151758649	151742823	151758649	-	ENST00000313115.10@ATOX1	ENST00000313115.10	protein_coding	151758546,151751704,151746279,151742823	151758649,151751779,151746449,151742959	Gene ID= ENSG00000177556.11 TPM= 24.43 Transcript Type= protein_coding
chr5	151765859	151766378	151765859	151766378	-	ENST00000518134.1@AC091982.1	ENST00000518134.1	transcribed_processed_pseudogene	151765859	151766378	Gene ID= ENSG00000213433.5 TPM= 5.31 Transcript Type= processed_transcript
chr5	151770242	151771508	151770242	151771508	-	ENST00000623943.1@AC091982.4	ENST00000623943.1	lincRNA	151771314,151770242	151771508,151770772	Gene ID= ENSG00000275765.5 TPM= 1.06 Transcript Type= lincRNA
chr5	151771943	151805350	151771943	151805350	+	ENST00000356245.7@G3BP1	ENST00000356245.7	protein_coding	151771943,151786572,151790323,151790889,151794159,151795479,151797227,151799212,151799889,151800218,151800760,151803885	151772036,151786715,151790404,151791062,151794249,151795575,151797428,151799313,151800000,151800346,151800869,151805350	Gene ID= ENSG00000145907.14 TPM= 97.72 Transcript Type= protein_coding
chr5	151808215	151811349	151808215	151811349	+	transcript4329.chr5.nnic@NA	transcript4329.chr5.nnic	NA	151808215	151811349	Gene ID= novel_gene_chr5_4330 TPM= 4.25 Transcript Type= NA
chr5	153990128	154038919	153990128	154038919	-	ENST00000351797.8@FAM114A2	ENST00000351797.8	protein_coding	154038857,154034744,154034278,154033791,154029489,154028149,154027176,154026399,154011241,154002847,154002251,153997803,153994919,153990128	154038919,154034967,154034377,154033883,154029580,154028283,154027334,154026522,154011320,154002969,154002390,153997875,153994972,153993110	Gene ID= ENSG00000055147.18 TPM= 1.06 Transcript Type= protein_coding
chr5	154028546	154031326	154028546	154031326	+	transcript4352.chr5.nnic@NA	transcript4352.chr5.nnic	NA	154028546	154031326	Gene ID= novel_gene_chr5_4353 TPM= 6.37 Transcript Type= NA
chr5	154035530	154038931	154035530	154038931	-	transcript4354.chr5.nnic@NA	transcript4354.chr5.nnic	NA	154035530	154038931	Gene ID= novel_gene_chr5_4355 TPM= 2.12 Transcript Type= NA
chr5	154038993	154055033	154038993	154055033	+	ENST00000322602.9@MFAP3	ENST00000322602.9	protein_coding	154038993,154049557,154052920	154039308,154050017,154055033	Gene ID= ENSG00000037749.11 TPM= 1.06 Transcript Type= protein_coding
chr5	154038945	154042843	154038945	154042843	+	transcript4368.chr5.nnic@NA	transcript4368.chr5.nnic	NA	154038945	154042843	Gene ID= novel_gene_chr5_4369 TPM= 2.12 Transcript Type= NA
chr5	154097023	154220478	154097023	154220478	+	ENST00000519325.1@MFAP3	ENST00000519325.1	protein_coding	154097023,154134845,154149866,154218029,154220058	154097271,154134916,154149946,154218149,154220478	Gene ID= ENSG00000037749.11 TPM= 1.06 Transcript Type= processed_transcript
chr5	154135225	154136509	154135225	154136509	-	transcript4371.chr5.nnic@NA	transcript4371.chr5.nnic	NA	154135225	154136509	Gene ID= novel_gene_chr5_4372 TPM= 4.25 Transcript Type= NA
chr5	154436001	154445850	154436001	154445850	-	ENST00000501280.3@SAP30L-AS1	ENST00000501280.3	antisense_RNA	154445738,154443362,154436001	154445850,154443480,154436336	Gene ID= ENSG00000245275.7 TPM= 1.06 Transcript Type= antisense_RNA
chr5	154445957	154461054	154445957	154461054	+	ENST00000297109.10@SAP30L	ENST00000297109.10	protein_coding	154445957,154451091,154453402,154455900	154446805,154451213,154453500,154461054	Gene ID= ENSG00000164576.11 TPM= 35.05 Transcript Type= protein_coding
chr5	154447943	154451014	154447943	154451014	-	transcript4382.chr5.nnic@NA	transcript4382.chr5.nnic	NA	154447943	154451014	Gene ID= novel_gene_chr5_4383 TPM= 19.12 Transcript Type= NA
chr5	154474966	154478286	154474966	154478286	-	transcript4387.chr5.nnic@NA	transcript4387.chr5.nnic	NA	154474966	154478286	Gene ID= novel_gene_chr5_4388 TPM= 2.12 Transcript Type= NA
chr5	154474972	154478264	154474972	154478264	-	ENST00000231121.2@HAND1	ENST00000231121.2	protein_coding	154477466,154474972	154478264,154475910	Gene ID= ENSG00000113196.2 TPM= 45.67 Transcript Type= protein_coding
chr5	154755314	154814915	154755314	154814915	+	transcript4390.chr5.nic@LARP1	transcript4390.chr5.nic	protein_coding	154755314,154790325,154790645,154792622,154793595,154793800,154794100,154795175,154799591,154799873,154802007,154803290,154803540,154804201,154805881,154808459,154811247,154811513,154813887	154756193,154790386,154790710,154792796,154793723,154794000,154794262,154795319,154799759,154800042,154802399,154803413,154803745,154804307,154806032,154808603,154811356,154811640,154814915	Gene ID= ENSG00000155506.16 TPM= 54.17 Transcript Type= NA
chr5	154773255	154777361	154773255	154777361	+	transcript4393.chr5.nnic@NA	transcript4393.chr5.nnic	NA	154773255	154777361	Gene ID= novel_gene_chr5_4394 TPM= 4.25 Transcript Type= NA
chr5	154818491	154850906	154818491	154850906	-	ENST00000326080.9@FAXDC2	ENST00000326080.9	protein_coding	154850483,154838131,154834843,154834625,154830801,154823387,154822472,154821260,154818491	154850906,154838178,154834934,154834728,154830922,154823592,154822577,154821426,154820472	Gene ID= ENSG00000170271.10 TPM= 5.31 Transcript Type= protein_coding
chr5	154858230	154876792	154858230	154876792	+	transcript4400.chr5.nic@CNOT8	transcript4400.chr5.nic	protein_coding	154858230,154858639,154863207,154865192,154870661,154871730,154872541,154875290	154858525,154858816,154863395,154865385,154870822,154871874,154872651,154876792	Gene ID= ENSG00000155508.13 TPM= 4.09 Transcript Type= NA
chr5	154858517	154876792	154858517	154876792	+	ENST00000403027.6@CNOT8	ENST00000403027.6	protein_coding	154858517,154863207,154865192,154870661,154871730,154872541,154875290	154858816,154863395,154865385,154870822,154871874,154872651,154876792	Gene ID= ENSG00000155508.13 TPM= 3.03 Transcript Type= protein_coding
chr5	154858546	154876793	154858546	154876793	+	ENST00000285896.10@CNOT8	ENST00000285896.10	protein_coding	154858546,154863207,154865192,154870661,154871730,154872541,154875290	154858768,154863395,154865385,154870822,154871874,154872651,154876793	Gene ID= ENSG00000155508.13 TPM= 18.43 Transcript Type= protein_coding
chr5	154858594	154876792	154858594	154876792	+	transcript4408.chr5.nic@CNOT8	transcript4408.chr5.nic	protein_coding	154858594,154870661,154871730,154872541,154875290	154858768,154870822,154871874,154872651,154876792	Gene ID= ENSG00000155508.13 TPM= 2.76 Transcript Type= NA
chr5	154858252	154876792	154858252	154876792	+	ENST00000517876.5@CNOT8	ENST00000517876.5	protein_coding	154858252,154858639,154863207,154865192,154870661,154871730,154872541,154875290	154858525,154858768,154863395,154865385,154870822,154871874,154872651,154876792	Gene ID= ENSG00000155508.13 TPM= 9.93 Transcript Type= protein_coding
chr5	154887416	154938209	154887416	154938209	-	ENST00000285873.7@GEMIN5	ENST00000285873.7	protein_coding	154937968,154937025,154935841,154932099,154931458,154928527,154927385,154925862,154924469,154921343,154919967,154917931,154916998,154912899,154911727,154907591,154905363,154904507,154903080,154902539,154901339,154899191,154898440,154896092,154892387,154891241,154889321,154887416	154938209,154937185,154936022,154932250,154931577,154928659,154927550,154926074,154924554,154921425,154920103,154918004,154917179,154913038,154911898,154907818,154905476,154904629,154903175,154902676,154901486,154899310,154898650,154896343,154892549,154891742,154889417,154888377	Gene ID= ENSG00000082516.8 TPM= 5.31 Transcript Type= protein_coding
chr5	154941070	154969411	154941070	154969411	+	ENST00000523037.5@MRPL22	ENST00000523037.5	protein_coding	154941070,154941217,154950821,154956371,154957135,154959980,154966686	154941138,154941265,154950938,154956436,154957212,154960049,154969411	Gene ID= ENSG00000082515.17 TPM= 53.11 Transcript Type= protein_coding
chr5	154941095	154966966	154941095	154966966	+	ENST00000439747.7@MRPL22	ENST00000439747.7	protein_coding	154941095,154950821,154956371,154957135,154959980,154966686	154941265,154950938,154956436,154957212,154960049,154966966	Gene ID= ENSG00000082515.17 TPM= 21.24 Transcript Type= protein_coding
chr5	155816071	155820508	155816071	155820508	+	transcript4438.chr5.nnic@NA	transcript4438.chr5.nnic	NA	155816071	155820508	Gene ID= novel_gene_chr5_4439 TPM= 2.12 Transcript Type= NA
chr5	156326757	156759604	156326757	156759604	+	ENST00000337851.8@SGCD	ENST00000337851.8	protein_coding	156326757,156329534,156344489,156508601,156589231,156594932,156647464,156757581,156759217	156327232,156329579,156344677,156508702,156589318,156595051,156647536,156757704,156759604	Gene ID= ENSG00000170624.13 TPM= 22.31 Transcript Type= protein_coding
chr5	156326746	156767788	156326746	156767788	+	ENST00000435422.7@SGCD	ENST00000435422.7	protein_coding	156326746,156344489,156508601,156589231,156594932,156647464,156757581,156759217	156327232,156344677,156508702,156589318,156595051,156647536,156757704,156767788	Gene ID= ENSG00000170624.13 TPM= 10.62 Transcript Type= protein_coding
chr5	155870534	155872430	155870534	155872430	-	transcript4454.chr5.nnic@NA	transcript4454.chr5.nnic	NA	155870534	155872430	Gene ID= novel_gene_chr5_4455 TPM= 2.12 Transcript Type= NA
chr5	156333785	156335655	156333785	156335655	-	transcript4450.chr5.nnic@NA	transcript4450.chr5.nnic	NA	156333785	156335655	Gene ID= novel_gene_chr5_4451 TPM= 15.93 Transcript Type= NA
chr5	156374664	156377743	156374664	156377743	-	transcript4452.chr5.nnic@NA	transcript4452.chr5.nnic	NA	156374664	156377743	Gene ID= novel_gene_chr5_4453 TPM= 5.31 Transcript Type= NA
chr5	156389303	156390730	156389303	156390730	+	transcript4444.chr5.nnic@NA	transcript4444.chr5.nnic	NA	156389303	156390730	Gene ID= novel_gene_chr5_4445 TPM= 2.12 Transcript Type= NA
chr5	156405903	156409208	156405903	156409208	-	transcript4456.chr5.nnic@NA	transcript4456.chr5.nnic	NA	156405903	156409208	Gene ID= novel_gene_chr5_4457 TPM= 4.25 Transcript Type= NA
chr5	156412555	156416523	156412555	156416523	+	transcript4440.chr5.nnic@NA	transcript4440.chr5.nnic	NA	156412555	156416523	Gene ID= novel_gene_chr5_4441 TPM= 4.25 Transcript Type= NA
chr5	156653495	156658716	156653495	156658716	-	transcript4448.chr5.nnic@NA	transcript4448.chr5.nnic	NA	156653495	156658716	Gene ID= novel_gene_chr5_4449 TPM= 19.12 Transcript Type= NA
chr5	157085832	157109714	157085832	157109714	-	ENST00000307851.8@HAVCR2	ENST00000307851.8	protein_coding	157108926,157106627,157104666,157098858,157095306,157088941,157085832	157109714,157106962,157104749,157098901,157095459,157088977,157087294	Gene ID= ENSG00000135077.8 TPM= 1.06 Transcript Type= protein_coding
chr5	157133294	157135478	157133294	157135478	-	transcript4459.chr5.nnic@NA	transcript4459.chr5.nnic	NA	157133294	157135478	Gene ID= novel_gene_chr5_4460 TPM= 2.12 Transcript Type= NA
chr5	157137412	157143184	157137412	157143184	-	ENST00000286317.5@MED7	ENST00000286317.5	protein_coding	157142820,157137412	157143184,157139448	Gene ID= ENSG00000155868.7 TPM= 3.19 Transcript Type= protein_coding
chr5	157266081	157393224	157266081	157393224	+	ENST00000620254.4@CYFIP2	ENST00000620254.4	protein_coding	157266081,157285339,157287019,157294783,157296673,157300715,157302794,157304238,157307761,157309743,157311664,157314344,157314969,157319762,157320655,157323921,157325482,157326171,157327973,157330742,157333327,157339057,157341070,157359005,157360282,157361468,157382590,157383265,157389189,157390521,157392833	157266195,157285478,157287108,157294860,157296774,157300896,157302890,157304366,157307865,157309834,157311781,157314463,157315094,157319928,157320802,157324074,157325638,157326267,157328049,157330850,157333446,157339256,157341157,157359148,157360372,157361598,157382662,157383359,157389427,157390668,157393224	Gene ID= ENSG00000055163.19 TPM= 10.62 Transcript Type= protein_coding
chr5	157266509	157393224	157266509	157393224	+	transcript4467.chr5.nic@CYFIP2	transcript4467.chr5.nic	protein_coding	157266509,157285339,157287019,157294783,157296673,157300715,157302794,157304238,157307761,157309743,157311664,157314344,157314969,157319762,157320655,157323921,157325482,157326171,157327973,157330742,157333327,157339057,157341070,157359005,157360282,157361468,157382590,157383265,157389189,157390521,157392833	157266584,157285478,157287108,157294860,157296774,157300896,157302890,157304366,157307865,157309834,157311781,157314463,157315094,157319928,157320802,157324074,157325638,157326267,157328049,157330850,157333446,157339256,157341157,157359148,157360372,157361598,157382662,157383359,157389427,157390668,157393224	Gene ID= ENSG00000055163.19 TPM= 8.5 Transcript Type= NA
chr5	157514331	157575834	157514331	157575834	-	transcript4472.chr5.nic@ADAM19	transcript4472.chr5.nic	protein_coding	157575603,157570895,157564373,157537913,157530807,157519839,157514331	157575834,157570980,157564443,157537991,157530883,157520031,157518888	Gene ID= ENSG00000135074.15 TPM= 2.12 Transcript Type= NA
chr5	157477304	157575775	157477304	157575775	-	ENST00000257527.8@ADAM19	ENST00000257527.8	protein_coding	157575603,157570895,157564373,157537913,157530807,157519839,157518823,157513434,157509301,157507056,157505669,157502803,157499573,157496894,157494687,157492973,157491835,157491615,157490310,157489102,157488265,157481791,157477304	157575775,157570980,157564443,157537991,157530883,157520031,157518888,157513505,157509467,157507140,157505808,157502980,157499662,157497089,157494795,157493177,157491912,157491723,157490454,157489186,157488489,157481943,157481002	Gene ID= ENSG00000135074.15 TPM= 125.33 Transcript Type= protein_coding
chr5	157460019	157474717	157460019	157474717	+	ENST00000311946.7@NIPAL4	ENST00000311946.7	protein_coding	157460019,157463094,157467049,157468722,157471657,157472332	157460357,157463333,157467105,157468812,157471817,157474717	Gene ID= ENSG00000172548.14 TPM= 1.06 Transcript Type= protein_coding
chr5	157731197	157741448	157731197	157741448	+	ENST00000231198.11@THG1L	ENST00000231198.11	protein_coding	157731197,157732868,157734576,157735846,157737887,157739321	157731631,157733044,157734745,157735934,157737994,157741448	Gene ID= ENSG00000113272.13 TPM= 6.37 Transcript Type= protein_coding
chr5	157743695	157760709	157743695	157760709	+	ENST00000286307.5@LSM11	ENST00000286307.5	protein_coding	157743695,157751390,157754004,157754854	157744198,157751529,157754087,157760709	Gene ID= ENSG00000155858.5 TPM= 2.12 Transcript Type= protein_coding
chr5	157786289	157859175	157786289	157859175	-	ENST00000411809.6@CLINT1	ENST00000411809.6	protein_coding	157858930,157817443,157816734,157814185,157813063,157809628,157805866,157803650,157794898,157791703,157789363,157786289	157859175,157817547,157816830,157814293,157813227,157809805,157806112,157803719,157794972,157791995,157789513,157787992	Gene ID= ENSG00000113282.13 TPM= 57.36 Transcript Type= protein_coding
chr5	157785743	157859145	157785743	157859145	-	ENST00000523094.5@CLINT1	ENST00000523094.5	protein_coding	157858953,157817443,157816734,157814185,157813063,157809628,157805866,157803650,157794898,157791703,157789363,157785743	157859145,157817547,157816830,157814293,157813227,157809805,157806112,157803719,157794972,157791995,157789567,157787992	Gene ID= ENSG00000113282.13 TPM= 1.06 Transcript Type= protein_coding
chr5	159157409	159209551	159157409	159209551	-	ENST00000424310.6@RNF145	ENST00000424310.6	protein_coding	159209231,159203434,159194716,159181960,159176632,159173983,159169679,159168873,159162932,159161266,159157409	159209551,159203656,159194824,159182051,159176867,159174158,159169819,159169055,159163079,159161622,159159035	Gene ID= ENSG00000145860.11 TPM= 32.93 Transcript Type= protein_coding
chr5	159263081	159286040	159263081	159286040	+	ENST00000296786.7@UBLCP1	ENST00000296786.7	protein_coding	159263081,159268870,159269908,159270360,159270528,159272023,159274585,159275148,159278238,159283212,159284904	159263360,159269069,159269999,159270445,159270643,159272121,159274622,159275246,159278354,159283339,159286040	Gene ID= ENSG00000164332.7 TPM= 19.12 Transcript Type= protein_coding
chr5	159314783	159330887	159314783	159330887	-	ENST00000231228.2@IL12B	ENST00000231228.2	protein_coding	159330432,159326695,159323054,159322394,159320306,159318736,159316685,159314783	159330887,159326782,159323329,159322511,159320520,159318893,159316816,159316100	Gene ID= ENSG00000113302.4 TPM= 1.06 Transcript Type= protein_coding
chr5	159510065	159511706	159510065	159511706	-	transcript4513.chr5.nnic@AC008703.1	transcript4513.chr5.nnic	lincRNA	159511585,159510065	159511706,159510351	Gene ID= ENSG00000283413.1 TPM= 2.12 Transcript Type= NA
chr5	159987102	159990168	159987102	159990168	+	transcript4514.chr5.nnic@NA	transcript4514.chr5.nnic	NA	159987102	159990168	Gene ID= novel_gene_chr5_4515 TPM= 2.12 Transcript Type= NA
chr5	160009113	160065543	160009113	160065543	+	ENST00000231238.9@TTC1	ENST00000231238.9	protein_coding	160009113,160010500,160035140,160036691,160043133,160049514,160051129,160064932	160009193,160010858,160035200,160036803,160043169,160049662,160051183,160065543	Gene ID= ENSG00000113312.10 TPM= 93.47 Transcript Type= protein_coding
chr5	160036506	160065511	160036506	160065511	+	ENST00000522073.5@TTC1	ENST00000522073.5	protein_coding	160036506,160043133,160049514,160051129,160064932	160036803,160043169,160049662,160051183,160065511	Gene ID= ENSG00000113312.10 TPM= 9.56 Transcript Type= retained_intron
chr5	160075882	160119423	160075882	160119423	-	ENST00000456329.7@PWWP2A	ENST00000456329.7	protein_coding	160118805,160093101,160080651,160075882	160119423,160094065,160080770,160078168	Gene ID= ENSG00000170234.12 TPM= 3.19 Transcript Type= protein_coding
chr5	160091339	160119423	160091339	160119423	-	ENST00000307063.8@PWWP2A	ENST00000307063.8	protein_coding	160118805,160091339	160119423,160094065	Gene ID= ENSG00000170234.12 TPM= 3.19 Transcript Type= protein_coding
chr5	160251653	160339650	160251653	160339650	-	ENST00000377503.6@CCNJL	ENST00000377503.6	protein_coding	160339445,160315382,160280525,160269463,160259469,160255549,160254129,160251653	160339650,160315505,160280738,160269544,160259771,160255708,160254335,160253798	Gene ID= ENSG00000135083.14 TPM= 12.75 Transcript Type= processed_transcript
chr5	160393148	160400097	160393148	160400097	-	ENST00000408953.3@ZBED8	ENST00000408953.3	protein_coding	160399639,160393148	160400097,160395539	Gene ID= ENSG00000221886.3 TPM= 7.44 Transcript Type= protein_coding
chr5	160393528	160400036	160393528	160400036	-	ENST00000523213.1@ZBED8	ENST00000523213.1	protein_coding	160399639,160397442,160393528	160400036,160397515,160395539	Gene ID= ENSG00000221886.3 TPM= 3.19 Transcript Type= protein_coding
chr5	160401641	160419394	160401641	160419394	-	ENST00000297151.8@SLU7	ENST00000297151.8	protein_coding	160419023,160415125,160414319,160413899,160413456,160412451,160408650,160408329,160407971,160407746,160407476,160406468,160405031,160404809,160404440,160401641	160419394,160415310,160414472,160413979,160413620,160412519,160408697,160408460,160408068,160407813,160407615,160406629,160405135,160404880,160404556,160403464	Gene ID= ENSG00000164609.9 TPM= 13.81 Transcript Type= protein_coding
chr5	163437581	163445016	163437581	163445016	+	transcript4555.chr5.nic@CCNG1	transcript4555.chr5.nic	protein_coding	163437581,163439257,163441078,163441886,163442045,163442374,163443674,163444337	163437804,163439520,163441331,163441964,163442143,163442568,163443925,163445016	Gene ID= ENSG00000113328.18 TPM= 6.64 Transcript Type= NA
chr5	163437571	163445014	163437571	163445014	+	ENST00000393929.5@CCNG1	ENST00000393929.5	protein_coding	163437571,163437765,163439257,163441078,163441886,163442045,163442374,163443674	163437664,163437804,163439520,163441331,163441964,163442143,163442568,163445014	Gene ID= ENSG00000113328.18 TPM= 41.16 Transcript Type= protein_coding
chr5	163437581	163445016	163437581	163445016	+	ENST00000340828.6@CCNG1	ENST00000340828.6	protein_coding	163437581,163439257,163441078,163441886,163442045,163442374,163443674	163437804,163439520,163441331,163441964,163442143,163442568,163445016	Gene ID= ENSG00000113328.18 TPM= 102.76 Transcript Type= protein_coding
chr5	163446526	163460140	163446526	163460140	-	ENST00000302764.8@NUDCD2	ENST00000302764.8	protein_coding	163459862,163457562,163456929,163446526	163460140,163457610,163457080,163454050	Gene ID= ENSG00000170584.10 TPM= 2.12 Transcript Type= protein_coding
chr5	163453576	163460100	163453576	163460100	-	transcript4568.chr5.nic@NUDCD2	transcript4568.chr5.nic	protein_coding	163458995,163457562,163456929,163453576	163460100,163457610,163457080,163454050	Gene ID= ENSG00000170584.10 TPM= 3.72 Transcript Type= NA
chr5	163453576	163460100	163453576	163460100	-	transcript4569.chr5.nic@NUDCD2	transcript4569.chr5.nic	protein_coding	163459327,163457562,163456929,163453576	163460100,163457610,163457080,163454050	Gene ID= ENSG00000170584.10 TPM= 2.66 Transcript Type= NA
chr5	163503114	163519336	163503114	163519336	+	ENST00000280969.9@MAT2B	ENST00000280969.9	protein_coding	163503114,163512002,163513555,163513842,163516518,163517561,163518193	163503424,163512196,163513669,163513994,163516711,163517674,163519336	Gene ID= ENSG00000038274.16 TPM= 9.56 Transcript Type= protein_coding
chr5	163505548	163519322	163505548	163519322	+	ENST00000321757.10@MAT2B	ENST00000321757.10	protein_coding	163505548,163512002,163513555,163513842,163516518,163517561,163518193	163505749,163512196,163513669,163513994,163516711,163517674,163519322	Gene ID= ENSG00000038274.16 TPM= 128.52 Transcript Type= protein_coding
chr5	167934862	167938783	167934862	167938783	+	transcript4588.chr5.nnic@NA	transcript4588.chr5.nnic	NA	167934862	167938783	Gene ID= novel_gene_chr5_4589 TPM= 2.12 Transcript Type= NA
chr5	167960833	167962246	167960833	167962246	+	transcript4590.chr5.nnic@NA	transcript4590.chr5.nnic	NA	167960833	167962246	Gene ID= novel_gene_chr5_4591 TPM= 2.12 Transcript Type= NA
chr5	168021777	168027529	168021777	168027529	-	transcript4592.chr5.nnic@NA	transcript4592.chr5.nnic	NA	168021777	168027529	Gene ID= novel_gene_chr5_4593 TPM= 2.12 Transcript Type= NA
chr5	168037540	168041598	168037540	168041598	-	transcript4594.chr5.nnic@NA	transcript4594.chr5.nnic	NA	168037540	168041598	Gene ID= novel_gene_chr5_4595 TPM= 2.12 Transcript Type= NA
chr5	168227518	168229444	168227518	168229444	-	transcript4596.chr5.nnic@NA	transcript4596.chr5.nnic	NA	168227518	168229444	Gene ID= novel_gene_chr5_4597 TPM= 3.19 Transcript Type= NA
chr5	168486445	168519299	168486445	168519299	+	ENST00000231572.7@RARS	ENST00000231572.7	protein_coding	168486445,168488602,168492659,168493894,168494550,168495315,168497228,168500591,168502001,168506021,168506722,168510581,168516778,168517815,168519081	168486543,168488736,168492847,168494002,168494650,168495436,168497348,168500720,168502105,168506199,168506831,168510686,168516950,168518062,168519299	Gene ID= ENSG00000113643.8 TPM= 62.67 Transcript Type= protein_coding
chr5	168529116	168530634	168529116	168530634	+	ENST00000338333.4@FBLL1	ENST00000338333.4	protein_coding	168529116	168530634	Gene ID= ENSG00000188573.7 TPM= 1.06 Transcript Type= protein_coding
chr5	168548495	168579600	168548495	168579600	-	ENST00000239231.6@PANK3	ENST00000239231.6	protein_coding	168579256,168568646,168566013,168563889,168561393,168559032,168548495	168579600,168568998,168566266,168564065,168561516,168559157,168557621	Gene ID= ENSG00000120137.6 TPM= 11.68 Transcript Type= protein_coding
chr5	168661740	169301129	168661740	169301129	-	ENST00000519560.5@SLIT3	ENST00000519560.5	protein_coding	169300513,169251388,169244705,169193479,168883265,168844584,168823260,168817300,168806446,168795507,168789560,168785907,168774235,168772781,168762539,168760862,168753864,168752955,168749472,168748302,168724416,168722933,168722256,168712283,168710895,168707976,168700582,168696292,168692607,168686979,168685687,168683966,168673177,168671198,168669783,168661740	169301129,169251459,169244776,169193550,168883336,168844655,168823331,168817463,168806587,168795578,168789631,168785978,168774378,168772944,168762689,168760936,168754007,168753098,168749635,168748434,168724484,168723004,168722327,168712354,168711058,168708100,168700679,168696431,168692700,168687116,168685927,168684096,168673331,168671483,168669991,168666689	Gene ID= ENSG00000184347.14 TPM= 3.19 Transcript Type= protein_coding
chr5	168752403	168844784	168752403	168844784	-	transcript4613.chr5.nic@SLIT3	transcript4613.chr5.nic	protein_coding	168844584,168823260,168817300,168806446,168795507,168789560,168785907,168774235,168772781,168762539,168760862,168753864,168752403	168844784,168823331,168817463,168806587,168795578,168789631,168785978,168774378,168772944,168762689,168760936,168754007,168753098	Gene ID= ENSG00000184347.14 TPM= 2.12 Transcript Type= NA
chr5	169583634	169604778	169583634	169604778	+	ENST00000265295.8@SPDL1	ENST00000265295.8	protein_coding	169583634,169588394,169591048,169593354,169594145,169594394,169594571,169596561,169598476,169598972,169601280,169604060	169583889,169588575,169591224,169593548,169594294,169594492,169594681,169596701,169598579,169599159,169601625,169604778	Gene ID= ENSG00000040275.16 TPM= 3.19 Transcript Type= protein_coding
chr5	170246237	170298227	170246237	170298227	-	ENST00000046794.9@LCP2	ENST00000046794.9	protein_coding	170297534,170293310,170287970,170275795,170275320,170274301,170270719,170268385,170267009,170266808,170262967,170262842,170262635,170261107,170258866,170258037,170256526,170253119,170252434,170250730,170246237	170298227,170293372,170288016,170275860,170275351,170274338,170270917,170268482,170267075,170266891,170262992,170262861,170262742,170261137,170258878,170258166,170256575,170253213,170252511,170250885,170248819	Gene ID= ENSG00000043462.11 TPM= 1.06 Transcript Type= protein_coding
chr5	170374671	170389677	170374671	170389677	-	ENST00000274629.8@KCNMB1	ENST00000274629.8	protein_coding	170389259,170385314,170383679,170374671	170389677,170385471,170383850,170378973	Gene ID= ENSG00000145936.8 TPM= 16.99 Transcript Type= protein_coding
chr5	170382652	170389634	170382652	170389634	-	ENST00000521859.1@KCNMB1	ENST00000521859.1	protein_coding	170389259,170385314,170382652	170389634,170385471,170383850	Gene ID= ENSG00000145936.8 TPM= 1.06 Transcript Type= protein_coding
chr5	170378164	170381538	170378164	170381538	-	transcript4624.chr5.nnic@NA	transcript4624.chr5.nnic	NA	170378164	170381538	Gene ID= novel_gene_chr5_4625 TPM= 3.19 Transcript Type= NA
chr5	170640823	170645873	170640823	170645873	+	transcript4635.chr5.nnic@NA	transcript4635.chr5.nnic	NA	170640823	170645873	Gene ID= novel_gene_chr5_4636 TPM= 2.12 Transcript Type= NA
chr5	171309284	171312134	171309284	171312134	+	ENST00000296921.5@TLX3	ENST00000296921.5	protein_coding	171309284,171310150,171311389	171309786,171310393,171312134	Gene ID= ENSG00000164438.5 TPM= 1.06 Transcript Type= protein_coding
chr5	171387648	171411137	171387648	171411137	+	ENST00000296930.9@NPM1	ENST00000296930.9	protein_coding	171387648,171390051,171391305,171391706,171392710,171392914,171400153,171400839,171405302,171407700,171410527	171388006,171390130,171391424,171391799,171392816,171392978,171400210,171400925,171405403,171407774,171411137	Gene ID= ENSG00000181163.13 TPM= 282.89 Transcript Type= protein_coding
chr5	171387852	171410884	171387852	171410884	+	transcript4648.chr5.nic@NPM1	transcript4648.chr5.nic	protein_coding	171387852,171391305,171391706,171392710,171392914,171400153,171400839,171405302,171407700,171410527	171388006,171391424,171391799,171392816,171392978,171400210,171400925,171405403,171407774,171410884	Gene ID= ENSG00000181163.13 TPM= 8.32 Transcript Type= NA
chr5	171387829	171410884	171387829	171410884	+	ENST00000351986.10@NPM1	ENST00000351986.10	protein_coding	171387829,171390051,171391305,171391706,171392710,171392914,171400153,171405302,171407700,171410527	171388006,171390130,171391424,171391799,171392816,171392978,171400210,171405403,171407774,171410884	Gene ID= ENSG00000181163.13 TPM= 1.94 Transcript Type= protein_coding
chr5	171419656	171457623	171419656	171457623	+	ENST00000274625.5@FGF18	ENST00000274625.5	protein_coding	171419656,171420407,171436093,171449147,171456539	171420231,171420443,171436273,171449253,171457623	Gene ID= ENSG00000156427.7 TPM= 31.86 Transcript Type= protein_coding
chr5	171861549	172006873	171861549	172006873	-	ENST00000296933.10@FBXW11	ENST00000296933.10	protein_coding	172006458,171914343,171910572,171899914,171899004,171891467,171878011,171876285,171872872,171870748,171869729,171868610,171861549	172006873,171914405,171910797,171900100,171899094,171891604,171878129,171876534,171872990,171870858,171869807,171868796,171864101	Gene ID= ENSG00000072803.17 TPM= 7.44 Transcript Type= protein_coding
chr5	171890674	172006648	171890674	172006648	-	transcript4672.chr5.nic@FBXW11	transcript4672.chr5.nic	protein_coding	172006458,171914343,171910572,171899914,171899004,171890674	172006648,171914405,171910797,171900100,171899094,171891604	Gene ID= ENSG00000072803.17 TPM= 3.19 Transcript Type= NA
chr5	171910062	172006656	171910062	172006656	-	transcript4673.chr5.nic@FBXW11	transcript4673.chr5.nic	protein_coding	172006458,171996890,171914343,171910062	172006656,171997051,171914405,171910797	Gene ID= ENSG00000072803.17 TPM= 2.12 Transcript Type= NA
chr5	171910726	172006663	171910726	172006663	-	transcript4681.chr5.nic@FBXW11	transcript4681.chr5.nic	protein_coding	172006458,171910726	172006663,171910797	Gene ID= ENSG00000072803.17 TPM= 4.25 Transcript Type= NA
chr5	172209640	172284071	172209640	172284071	-	ENST00000393792.2@UBTD2	ENST00000393792.2	protein_coding	172283596,172234122,172209640	172284071,172234358,172212227	Gene ID= ENSG00000168246.5 TPM= 22.31 Transcript Type= protein_coding
chr5	172333499	172454523	172333499	172454523	-	ENST00000311601.5@SH3PXD2B	ENST00000311601.5	protein_coding	172454278,172422416,172406277,172394563,172382036,172373790,172362735,172358773,172353888,172350363,172347283,172346136,172333499	172454523,172422496,172406352,172394639,172382127,172373815,172362869,172358877,172354005,172350589,172347332,172346261,172339916	Gene ID= ENSG00000174705.12 TPM= 7.44 Transcript Type= protein_coding
chr5	172678989	172682586	172678989	172682586	+	transcript4701.chr5.nnic@NA	transcript4701.chr5.nnic	NA	172678989	172682586	Gene ID= novel_gene_chr5_4702 TPM= 3.19 Transcript Type= NA
chr5	172768090	172771195	172768090	172771195	-	ENST00000239223.3@DUSP1	ENST00000239223.3	protein_coding	172770586,172770161,172769575,172768090	172771195,172770306,172769794,172769132	Gene ID= ENSG00000120129.5 TPM= 101.97 Transcript Type= protein_coding
chr5	172766989	172769134	172766989	172769134	-	transcript4706.chr5.nnic@DUSP1	transcript4706.chr5.nnic	protein_coding	172768749,172766989	172769134,172768044	Gene ID= ENSG00000120129.5 TPM= 3.19 Transcript Type= NA
chr5	172768088	172771198	172768088	172771198	-	transcript4708.chr5.nnic@NA	transcript4708.chr5.nnic	NA	172768088	172771198	Gene ID= novel_gene_chr5_4709 TPM= 4.25 Transcript Type= NA
chr5	172959460	172969718	172959460	172969718	+	ENST00000519239.5@RPL26L1	ENST00000519239.5	protein_coding	172959460,172959865,172968459,172969413	172959514,172960041,172968599,172969718	Gene ID= ENSG00000037241.7 TPM= 2.12 Transcript Type= protein_coding
chr5	172959424	172969771	172959424	172969771	+	ENST00000265100.6@RPL26L1	ENST00000265100.6	protein_coding	172959424,172959865,172968459,172969413	172959468,172960041,172968599,172969771	Gene ID= ENSG00000037241.7 TPM= 18.06 Transcript Type= protein_coding
chr5	173144515	173164387	173144515	173164387	+	ENST00000351486.9@BNIP1	ENST00000351486.9	protein_coding	173144515,173146866,173154322,173158744,173159933,173163725	173144629,173146958,173154413,173158845,173160051,173164387	Gene ID= ENSG00000113734.17 TPM= 24.43 Transcript Type= protein_coding
chr5	173232109	173235357	173232109	173235357	-	ENST00000329198.4@NKX2-5	ENST00000329198.4	protein_coding	173234750,173232109	173235357,173233209	Gene ID= ENSG00000183072.9 TPM= 305.55 Transcript Type= protein_coding
chr5	173243911	173246539	173243911	173246539	+	transcript4749.chr5.nnic@NA	transcript4749.chr5.nnic	NA	173243911	173246539	Gene ID= novel_gene_chr5_4750 TPM= 5.31 Transcript Type= NA
chr5	173314713	173329503	173314713	173329503	-	ENST00000265087.8@STC2	ENST00000265087.8	protein_coding	173328043,173325868,173323219,173314713	173329503,173326010,173323430,173318249	Gene ID= ENSG00000113739.10 TPM= 3.19 Transcript Type= protein_coding
chr5	173607514	173616660	173607514	173616660	-	ENST00000311086.8@BOD1	ENST00000311086.8	protein_coding	173616200,173613131,173609238,173607514	173616660,173613255,173609434,173608292	Gene ID= ENSG00000145919.10 TPM= 41.42 Transcript Type= protein_coding
chr5	173607521	173616588	173607521	173616588	-	ENST00000285908.5@BOD1	ENST00000285908.5	protein_coding	173616200,173613131,173607521	173616588,173613255,173608292	Gene ID= ENSG00000145919.10 TPM= 2.12 Transcript Type= protein_coding
chr5	173888280	173961976	173888280	173961976	+	ENST00000265085.9@CPEB4	ENST00000265085.9	protein_coding	173888280,173910523,173932450,173943026,173944967,173949508,173949960,173951824,173953091,173955910	173890858,173910604,173932500,173943049,173945140,173949597,173950078,173951938,173953272,173961976	Gene ID= ENSG00000113742.12 TPM= 67.98 Transcript Type= protein_coding
chr5	173892276	173894152	173892276	173894152	-	transcript4777.chr5.nnic@NA	transcript4777.chr5.nnic	NA	173892276	173894152	Gene ID= novel_gene_chr5_4778 TPM= 38.24 Transcript Type= NA
chr5	174724533	174730893	174724533	174730893	+	ENST00000239243.6@MSX2	ENST00000239243.6	protein_coding	174724533,174729159	174725038,174730893	Gene ID= ENSG00000120149.8 TPM= 6.37 Transcript Type= protein_coding
chr5	174724602	174729880	174724602	174729880	+	ENST00000507785.2@MSX2	ENST00000507785.2	protein_coding	174724602,174729159	174725067,174729880	Gene ID= ENSG00000120149.8 TPM= 2.12 Transcript Type= protein_coding
chr5	175478395	175529742	175478395	175529742	+	ENST00000321442.9@SFXN1	ENST00000321442.9	protein_coding	175478395,175492095,175509032,175510109,175511451,175512111,175513463,175516614,175521919,175522375,175526638	175478639,175492267,175509202,175510207,175511526,175512196,175513590,175516663,175521968,175522422,175529742	Gene ID= ENSG00000164466.12 TPM= 14.87 Transcript Type= protein_coding
chr5	175478496	175513738	175478496	175513738	+	transcript4796.chr5.nic@SFXN1	transcript4796.chr5.nic	protein_coding	175478496,175492095,175509032,175510109,175511451,175512111,175513463	175478639,175492267,175509202,175510207,175511526,175512196,175513738	Gene ID= ENSG00000164466.12 TPM= 3.19 Transcript Type= NA
chr5	175478560	175511568	175478560	175511568	+	transcript4798.chr5.nic@SFXN1	transcript4798.chr5.nic	protein_coding	175478560,175492095,175509032	175478639,175492267,175511568	Gene ID= ENSG00000164466.12 TPM= 4.25 Transcript Type= NA
chr5	175657749	175710756	175657749	175710756	+	transcript4800.chr5.nic@HRH2	transcript4800.chr5.nic	protein_coding	175657749,175682709,175707779	175658155,175684309,175710756	Gene ID= ENSG00000113749.7 TPM= 21.24 Transcript Type= NA
chr5	175683221	175710756	175683221	175710756	+	ENST00000636584.1@HRH2	ENST00000636584.1	protein_coding	175683221,175707779	175684309,175710756	Gene ID= ENSG00000113749.7 TPM= 55.76 Transcript Type= protein_coding
chr5	175917873	175968302	175917873	175968302	-	transcript4806.chr5.nic@THOC3	transcript4806.chr5.nic	protein_coding	175967942,175967111,175964951,175961273,175961051,175917873	175968302,175967267,175965155,175961434,175961151,175918172	Gene ID= ENSG00000051596.9 TPM= 2.12 Transcript Type= NA
chr5	175959527	175968299	175959527	175968299	-	ENST00000265097.8@THOC3	ENST00000265097.8	protein_coding	175967942,175967111,175964951,175961273,175961051,175959527	175968299,175967267,175965155,175961434,175961151,175960132	Gene ID= ENSG00000051596.9 TPM= 29.21 Transcript Type= protein_coding
chr5	175959536	175968302	175959536	175968302	-	transcript4809.chr5.nnic@THOC3	transcript4809.chr5.nnic	protein_coding	175967942,175967111,175964951,175961273,175960930,175959536	175968302,175967267,175965155,175961434,175961151,175960132	Gene ID= ENSG00000051596.9 TPM= 2.66 Transcript Type= NA
chr5	176346061	176361968	176346061	176361968	-	ENST00000298569.8@KIAA1191	ENST00000298569.8	protein_coding	176361602,176359811,176359481,176355571,176352622,176350613,176348250,176347921,176346061	176361968,176359918,176359567,176355749,176352748,176350737,176348356,176348063,176347808	Gene ID= ENSG00000122203.14 TPM= 127.19 Transcript Type= protein_coding
chr5	176346065	176361807	176346065	176361807	-	ENST00000614420.4@KIAA1191	ENST00000614420.4	protein_coding	176361602,176355571,176352622,176350613,176348250,176347921,176346065	176361807,176355749,176352748,176350737,176348356,176348063,176347808	Gene ID= ENSG00000122203.14 TPM= 8.76 Transcript Type= protein_coding
chr5	176346065	176361807	176346065	176361807	-	ENST00000620366.4@KIAA1191	ENST00000620366.4	protein_coding	176361602,176352622,176350613,176348250,176347921,176346065	176361807,176352748,176350737,176348356,176348063,176347808	Gene ID= ENSG00000122203.14 TPM= 7.35 Transcript Type= protein_coding
chr5	176346065	176361807	176346065	176361807	-	transcript4828.chr5.nic@KIAA1191	transcript4828.chr5.nic	protein_coding	176361602,176359811,176359481,176348250,176347921,176346065	176361807,176359918,176359567,176348356,176348063,176347808	Gene ID= ENSG00000122203.14 TPM= 12.93 Transcript Type= NA
chr5	176346062	176361765	176346062	176361765	-	ENST00000393725.6@KIAA1191	ENST00000393725.6	protein_coding	176361602,176359811,176355571,176352622,176350613,176348250,176347921,176346062	176361765,176359918,176355749,176352748,176350737,176348356,176348063,176347808	Gene ID= ENSG00000122203.14 TPM= 12.48 Transcript Type= protein_coding
chr5	176387182	176389759	176387182	176389759	+	transcript4846.chr5.nnic@NA	transcript4846.chr5.nnic	NA	176387182	176389759	Gene ID= novel_gene_chr5_4847 TPM= 5.31 Transcript Type= NA
chr5	176388747	176389771	176388747	176389771	+	ENST00000274787.2@HIGD2A	ENST00000274787.2	protein_coding	176388747,176389331	176388973,176389771	Gene ID= ENSG00000146066.2 TPM= 261.29 Transcript Type= protein_coding
chr5	176405559	176416558	176405559	176416558	-	transcript4855.chr5.nic@CLTB	transcript4855.chr5.nic	protein_coding	176416177,176410257,176405559	176416558,176410303,176406708	Gene ID= ENSG00000175416.12 TPM= 10.62 Transcript Type= NA
chr5	176392455	176416569	176392455	176416569	-	ENST00000345807.6@CLTB	ENST00000345807.6	protein_coding	176416177,176410257,176397930,176397607,176392455	176416569,176410303,176398047,176397718,176392945	Gene ID= ENSG00000175416.12 TPM= 383.44 Transcript Type= protein_coding
chr5	176448355	176510074	176448355	176510074	+	ENST00000261942.6@FAF2	ENST00000261942.6	protein_coding	176448355,176479188,176486355,176488951,176492194,176493999,176494184,176496486,176498914,176500003,176506768	176448470,176479256,176486489,176489027,176492332,176494084,176494275,176496663,176499085,176500146,176510074	Gene ID= ENSG00000113194.12 TPM= 20.18 Transcript Type= protein_coding
chr5	176526955	176527969	176526955	176527969	-	transcript4866.chr5.nnic@NA	transcript4866.chr5.nnic	NA	176526955	176527969	Gene ID= novel_gene_chr5_4867 TPM= 6.37 Transcript Type= NA
chr5	176647450	176659051	176647450	176659051	+	transcript4871.chr5.nic@TSPAN17	transcript4871.chr5.nic	protein_coding	176647450,176651616,176651754,176652743,176654895,176656078,176656700,176656895	176647702,176651666,176651900,176652913,176655020,176656125,176656816,176659051	Gene ID= ENSG00000048140.17 TPM= 7.79 Transcript Type= NA
chr5	176647466	176659051	176647466	176659051	+	transcript4875.chr5.nic@TSPAN17	transcript4875.chr5.nic	protein_coding	176647466,176652743,176654895,176656078,176656700,176656895,176657518	176647702,176652913,176655020,176656125,176656816,176656956,176659051	Gene ID= ENSG00000048140.17 TPM= 6.72 Transcript Type= NA
chr5	176647502	176659051	176647502	176659051	+	ENST00000508164.5@TSPAN17	ENST00000508164.5	protein_coding	176647502,176651616,176651754,176652743,176654895,176656078,176656700,176656895,176657518	176647702,176651666,176651900,176652913,176655020,176656125,176656816,176656956,176659051	Gene ID= ENSG00000048140.17 TPM= 8.85 Transcript Type= protein_coding
chr5	176653296	176655749	176653296	176655749	+	transcript4879.chr5.nnic@NA	transcript4879.chr5.nnic	NA	176653296	176655749	Gene ID= novel_gene_chr5_4880 TPM= 2.12 Transcript Type= NA
chr5	176880869	176899346	176880869	176899346	-	transcript4883.chr5.nic@HK3	transcript4883.chr5.nic	protein_coding	176899267,176896064,176891388,176891037,176890822,176890635,176889645,176889381,176888332,176887451,176887201,176887002,176884039,176883770,176881944,176881692,176881302,176880869	176899346,176896185,176891550,176891191,176890941,176890730,176889744,176889564,176888864,176887746,176887337,176887121,176884134,176883869,176882127,176881847,176881535,176881217	Gene ID= ENSG00000160883.10 TPM= 5.84 Transcript Type= NA
chr5	176880871	176899332	176880871	176899332	-	ENST00000292432.9@HK3	ENST00000292432.9	protein_coding	176899267,176896064,176891388,176891037,176890822,176890635,176889645,176889381,176888709,176888332,176887451,176887201,176887002,176884039,176883770,176881944,176881692,176881302,176880871	176899332,176896185,176891550,176891191,176890941,176890730,176889744,176889564,176888864,176888565,176887746,176887337,176887121,176884134,176883869,176882127,176881847,176881535,176881217	Gene ID= ENSG00000160883.10 TPM= 1.59 Transcript Type= protein_coding
chr5	176905050	177006789	176905050	177006789	-	transcript4889.chr5.nic@UIMC1	transcript4889.chr5.nic	protein_coding	177006539,176982469,176975396,176970742,176969601,176968555,176958093,176955959,176951474,176943335,176911311,176908523,176907114,176906011,176905050	177006789,176982623,176975480,176970866,176969706,176969291,176958154,176956035,176951577,176943488,176911389,176908694,176907177,176906047,176905492	Gene ID= ENSG00000087206.16 TPM= 3.82 Transcript Type= NA
chr5	176905050	177006789	176905050	177006789	-	transcript4894.chr5.nic@UIMC1	transcript4894.chr5.nic	protein_coding	177006539,176982469,176975396,176970742,176969601,176958093,176955959,176951474,176943335,176911311,176908523,176907114,176906011,176905050	177006789,176982623,176975480,176970866,176969706,176958154,176956035,176951577,176943488,176911389,176908694,176907177,176906047,176905492	Gene ID= ENSG00000087206.16 TPM= 4.89 Transcript Type= NA
chr5	176905050	177006794	176905050	177006794	-	transcript4895.chr5.nic@UIMC1	transcript4895.chr5.nic	protein_coding	177006650,176982469,176975396,176970742,176969601,176958093,176955959,176951474,176943335,176911311,176908523,176907114,176906011,176905050	177006794,176982623,176975480,176970866,176969706,176958154,176956035,176951577,176943488,176911389,176908694,176907177,176906047,176905492	Gene ID= ENSG00000087206.16 TPM= 4.89 Transcript Type= NA
chr5	176905050	177006789	176905050	177006789	-	transcript4897.chr5.nnic@UIMC1	transcript4897.chr5.nnic	protein_coding	177006539,176982469,176975396,176970742,176958093,176955959,176951474,176943335,176911311,176908523,176907114,176906011,176905050	177006789,176982623,176975480,176970866,176958154,176956035,176951577,176943488,176911389,176908694,176907177,176906047,176905492	Gene ID= ENSG00000087206.16 TPM= 10.2 Transcript Type= NA
chr5	176905050	177006794	176905050	177006794	-	transcript4898.chr5.nnic@UIMC1	transcript4898.chr5.nnic	protein_coding	177006650,176982469,176975396,176970742,176958093,176955959,176951474,176943335,176911311,176908523,176907114,176906011,176905050	177006794,176982623,176975480,176970866,176958154,176956035,176951577,176943488,176911389,176908694,176907177,176906047,176905492	Gene ID= ENSG00000087206.16 TPM= 16.57 Transcript Type= NA
chr5	176969319	177006733	176969319	177006733	-	transcript4899.chr5.nic@UIMC1	transcript4899.chr5.nic	protein_coding	177006539,176982469,176975396,176970742,176969319	177006733,176982623,176975480,176970866,176969706	Gene ID= ENSG00000087206.16 TPM= 2.12 Transcript Type= NA
chr5	176967803	176970293	176967803	176970293	+	transcript4902.chr5.nnic@NA	transcript4902.chr5.nnic	NA	176967803	176970293	Gene ID= novel_gene_chr5_4903 TPM= 20.18 Transcript Type= NA
chr5	177005242	177006728	177005242	177006728	-	transcript4906.chr5.nnic@NA	transcript4906.chr5.nnic	NA	177005242	177006728	Gene ID= novel_gene_chr5_4907 TPM= 2.12 Transcript Type= NA
chr5	177022696	177065985	177022696	177065985	+	ENST00000358149.7@ZNF346	ENST00000358149.7	protein_coding	177022696,177041126,177041778,177044389,177050751,177062058,177064512	177022913,177041229,177041870,177044533,177050936,177062151,177065985	Gene ID= ENSG00000113761.11 TPM= 7.44 Transcript Type= protein_coding
chr5	177141321	177142848	177141321	177142848	-	transcript4922.chr5.nnic@NA	transcript4922.chr5.nnic	NA	177141321	177142848	Gene ID= novel_gene_chr5_4923 TPM= 4.25 Transcript Type= NA
chr5	177301464	177303708	177301464	177303708	-	ENST00000303251.10@RAB24	ENST00000303251.10	protein_coding	177303172,177303009,177302752,177302577,177302397,177302128,177301925,177301464	177303708,177303077,177302830,177302644,177302496,177302178,177301987,177301807	Gene ID= ENSG00000169228.13 TPM= 16.99 Transcript Type= protein_coding
chr5	177301451	177303706	177301451	177303706	-	ENST00000393611.6@RAB24	ENST00000393611.6	protein_coding	177303407,177303172,177303009,177302752,177302577,177302397,177302128,177301925,177301451	177303706,177303320,177303077,177302830,177302644,177302496,177302178,177301987,177301807	Gene ID= ENSG00000169228.13 TPM= 7.44 Transcript Type= protein_coding
chr5	177303774	177306959	177303774	177306959	+	ENST00000303204.8@PRELID1	ENST00000303204.8	protein_coding	177303774,177304625,177305871,177306098,177306422	177304077,177304850,177305984,177306176,177306959	Gene ID= ENSG00000169230.9 TPM= 106.22 Transcript Type= protein_coding
chr5	177331562	177351852	177331562	177351852	-	ENST00000303127.11@LMAN2	ENST00000303127.11	protein_coding	177351452,177351173,177338488,177337706,177337363,177337136,177334284,177331562	177351852,177351291,177338605,177337785,177337524,177337250,177334403,177332246	Gene ID= ENSG00000169223.14 TPM= 163.04 Transcript Type= protein_coding
chr5	177332031	177351647	177332031	177351647	-	ENST00000515209.5@LMAN2	ENST00000515209.5	protein_coding	177351452,177351173,177338488,177337706,177337363,177337136,177334284,177332031	177351647,177351291,177338605,177337785,177337524,177337250,177334403,177332269	Gene ID= ENSG00000169223.14 TPM= 1.06 Transcript Type= protein_coding
chr5	177426745	177436685	177426745	177436685	+	ENST00000507633.5@GRK6	ENST00000507633.5	protein_coding	177426745,177430872,177431995,177432233,177432706,177433147,177433347,177433536,177433914,177434902,177435032,177436073,177436393	177426897,177430967,177432107,177432310,177432806,177433239,177433410,177433676,177434104,177434939,177435121,177436281,177436685	Gene ID= ENSG00000198055.10 TPM= 3.19 Transcript Type= protein_coding
chr5	177426678	177442830	177426678	177442830	+	ENST00000355472.9@GRK6	ENST00000355472.9	protein_coding	177426678,177430872,177431995,177432233,177432706,177433147,177433347,177433536,177433914,177434902,177435032,177436073,177436393,177440700,177440919,177441737	177426897,177430967,177432107,177432310,177432806,177433239,177433410,177433676,177434104,177434939,177435121,177436281,177436530,177440837,177441053,177442830	Gene ID= ENSG00000198055.10 TPM= 1.06 Transcript Type= protein_coding
chr5	177426843	177442625	177426843	177442625	+	ENST00000528793.5@GRK6	ENST00000528793.5	protein_coding	177426843,177430872,177431995,177432233,177432706,177433147,177433347,177433536,177433914,177434902,177435032,177436073,177436393,177440700,177440919,177441735	177426897,177430967,177432107,177432310,177432806,177433239,177433410,177433676,177434104,177434939,177435121,177436281,177436530,177440837,177441053,177442625	Gene ID= ENSG00000198055.10 TPM= 8.5 Transcript Type= protein_coding
chr5	177446827	177456268	177446827	177456268	+	ENST00000502922.5@PRR7	ENST00000502922.5	protein_coding	177446827,177454829,177455724	177446960,177455494,177456268	Gene ID= ENSG00000131188.11 TPM= 4.25 Transcript Type= protein_coding
chr5	177456608	177473741	177456608	177473741	-	ENST00000309007.9@DBN1	ENST00000309007.9	protein_coding	177473436,177468844,177468108,177467743,177467481,177467255,177466911,177466772,177460644,177460432,177459098,177458058,177457655,177456608	177473741,177468899,177468220,177467817,177467627,177467332,177467062,177466835,177460703,177460555,177459268,177458707,177457757,177457503	Gene ID= ENSG00000113758.13 TPM= 22.31 Transcript Type= protein_coding
chr5	177456936	177473637	177456936	177473637	-	ENST00000393565.5@DBN1	ENST00000393565.5	protein_coding	177473436,177468844,177468108,177467743,177467481,177467255,177466911,177466772,177460644,177460432,177459603,177459098,177458058,177457655,177456936	177473637,177468899,177468220,177467817,177467627,177467332,177467062,177466835,177460703,177460555,177459740,177459268,177458707,177457757,177457503	Gene ID= ENSG00000113758.13 TPM= 7.44 Transcript Type= protein_coding
chr5	177483394	177496730	177483394	177496730	-	transcript4992.chr5.nic@PDLIM7	transcript4992.chr5.nic	protein_coding	177496417,177492526,177492405,177491807,177491010,177490870,177489771,177489393,177488068,177484070,177483867,177483394	177496730,177492677,177492435,177491925,177491146,177490906,177489832,177489627,177488248,177484190,177483982,177483730	Gene ID= ENSG00000196923.13 TPM= 10.62 Transcript Type= NA
chr5	177490246	177497615	177490246	177497615	-	transcript4999.chr5.nic@PDLIM7	transcript4999.chr5.nic	protein_coding	177497528,177496417,177492526,177492405,177491807,177491404,177491010,177490870,177490246	177497615,177496523,177492677,177492435,177491925,177491420,177491146,177490906,177490593	Gene ID= ENSG00000196923.13 TPM= 19.12 Transcript Type= NA
chr5	177490246	177497605	177490246	177497605	-	transcript5004.chr5.nic@PDLIM7	transcript5004.chr5.nic	protein_coding	177497528,177496417,177492526,177491807,177491404,177491010,177490870,177490246	177497605,177496523,177492677,177492435,177491420,177491146,177490906,177490593	Gene ID= ENSG00000196923.13 TPM= 16.64 Transcript Type= NA
chr5	177490246	177497668	177490246	177497668	-	transcript5006.chr5.nic@PDLIM7	transcript5006.chr5.nic	protein_coding	177497528,177496417,177492526,177492405,177491404,177491010,177490870,177490246	177497668,177496523,177492677,177492435,177491420,177491146,177490906,177490593	Gene ID= ENSG00000196923.13 TPM= 83.91 Transcript Type= NA
chr5	177483396	177497583	177483396	177497583	-	ENST00000355841.6@PDLIM7	ENST00000355841.6	protein_coding	177497528,177496417,177492526,177492405,177491807,177491010,177490870,177489771,177489393,177488068,177484070,177483867,177483396	177497583,177496523,177492677,177492435,177491925,177491146,177490906,177489832,177489627,177488248,177484190,177483982,177483730	Gene ID= ENSG00000196923.13 TPM= 18.06 Transcript Type= protein_coding
chr5	177483394	177497561	177483394	177497561	-	ENST00000359895.6@PDLIM7	ENST00000359895.6	protein_coding	177497528,177496417,177492526,177492405,177491404,177491010,177490870,177489771,177489393,177488068,177484070,177483867,177483394	177497561,177496523,177492677,177492435,177491420,177491146,177490906,177489832,177489627,177488248,177484190,177483982,177483730	Gene ID= ENSG00000196923.13 TPM= 8.5 Transcript Type= protein_coding
chr5	177490246	177497573	177490246	177497573	-	ENST00000355572.6@PDLIM7	ENST00000355572.6	protein_coding	177497528,177496417,177492526,177492405,177491807,177491010,177490870,177490246	177497573,177496523,177492677,177492435,177491925,177491146,177490906,177490593	Gene ID= ENSG00000196923.13 TPM= 8.5 Transcript Type= protein_coding
chr5	177511577	177517469	177511577	177517469	-	ENST00000507955.5@DDX41	ENST00000507955.5	protein_coding	177516919,177516725,177516288,177516119,177515929,177515685,177515186,177514916,177514701,177513685,177513353,177513011,177512780,177512496,177512322,177512096,177511577	177517469,177516835,177516447,177516193,177515989,177515821,177515258,177515069,177514837,177513847,177513484,177513082,177512876,177512645,177512393,177512206,177511927	Gene ID= ENSG00000183258.11 TPM= 30.8 Transcript Type= protein_coding
chr5	177547288	177549481	177547288	177549481	-	transcript5041.chr5.nnic@NA	transcript5041.chr5.nnic	NA	177547288	177549481	Gene ID= novel_gene_chr5_5042 TPM= 2.12 Transcript Type= NA
chr5	177551271	177554522	177551271	177554522	-	transcript5039.chr5.nnic@NA	transcript5039.chr5.nnic	NA	177551271	177554522	Gene ID= novel_gene_chr5_5040 TPM= 5.31 Transcript Type= NA
chr5	177592158	177596124	177592158	177596124	+	ENST00000332598.6@TMED9	ENST00000332598.6	protein_coding	177592158,177592575,177593650,177594139,177595267	177592398,177592675,177593775,177594285,177596124	Gene ID= ENSG00000184840.11 TPM= 140.21 Transcript Type= protein_coding
chr5	177600089	177605224	177600089	177605224	+	transcript5051.chr5.nic@B4GALT7	transcript5051.chr5.nic	protein_coding	177600089,177604179,177605045	177600260,177604541,177605224	Gene ID= ENSG00000027847.13 TPM= 6.37 Transcript Type= NA
chr5	177600100	177610347	177600100	177610347	+	ENST00000029410.9@B4GALT7	ENST00000029410.9	protein_coding	177600100,177604179,177607302,177608539,177608910,177609540	177600260,177604541,177607527,177608622,177609014,177610347	Gene ID= ENSG00000027847.13 TPM= 14.87 Transcript Type= protein_coding
chr5	178113443	178126087	178113443	178126087	+	ENST00000274605.5@N4BP3	ENST00000274605.5	protein_coding	178113443,178119554,178120178,178121098,178121474	178113771,178119913,178120699,178121352,178126087	Gene ID= ENSG00000145911.5 TPM= 2.12 Transcript Type= protein_coding
chr5	178125259	178127029	178125259	178127029	+	transcript5082.chr5.nnic@NA	transcript5082.chr5.nnic	NA	178125259	178127029	Gene ID= novel_gene_chr5_5083 TPM= 3.19 Transcript Type= NA
chr5	178130996	178148568	178130996	178148568	+	ENST00000313386.8@RMND5B	ENST00000313386.8	protein_coding	178130996,178131237,178138108,178142583,178142852,178143627,178143942,178146114,178147533,178147729,178147969	178131054,178131376,178138258,178142728,178142992,178143727,178144108,178146279,178147635,178147883,178148568	Gene ID= ENSG00000145916.18 TPM= 48.33 Transcript Type= protein_coding
chr5	178131007	178148540	178131007	178148540	+	transcript5060.chr5.nic@RMND5B	transcript5060.chr5.nic	protein_coding	178131007,178138108,178142583,178142852,178143627,178143942,178146114,178147533,178147729,178147969	178131054,178138258,178142728,178142992,178143727,178144108,178146279,178147635,178147883,178148540	Gene ID= ENSG00000145916.18 TPM= 7.44 Transcript Type= NA
chr5	178131019	178150565	178131019	178150565	+	transcript5064.chr5.nic@RMND5B	transcript5064.chr5.nic	protein_coding	178131019,178138108,178142583,178142852,178143627,178143942,178146114,178147533,178147729,178147969	178131376,178138258,178142728,178142992,178143727,178144108,178146279,178147635,178147883,178150565	Gene ID= ENSG00000145916.18 TPM= 15.93 Transcript Type= NA
chr5	178149460	178153967	178149460	178153967	-	ENST00000274606.7@NHP2	ENST00000274606.7	protein_coding	178153658,178153491,178150888,178149460	178153967,178153560,178150993,178149838	Gene ID= ENSG00000145912.8 TPM= 115.78 Transcript Type= protein_coding
chr5	178149482	178153829	178149482	178153829	-	ENST00000314397.8@NHP2	ENST00000314397.8	protein_coding	178153658,178153491,178149482	178153829,178153560,178149838	Gene ID= ENSG00000145912.8 TPM= 5.31 Transcript Type= protein_coding
chr5	178204507	178211163	178204507	178211163	+	ENST00000358344.7@HNRNPAB	ENST00000358344.7	protein_coding	178204507,178204815,178205842,178206732,178207094,178209330,178210132,178210553	178204740,178205046,178206010,178206890,178207225,178209447,178210272,178211163	Gene ID= ENSG00000197451.11 TPM= 41.96 Transcript Type= protein_coding
chr5	178204539	178211142	178204539	178211142	+	ENST00000355836.9@HNRNPAB	ENST00000355836.9	protein_coding	178204539,178204815,178205842,178206732,178207094,178209330,178210553	178204740,178205046,178206010,178206890,178207225,178209447,178211142	Gene ID= ENSG00000197451.11 TPM= 3.19 Transcript Type= protein_coding
chr5	178204548	178211149	178204548	178211149	+	ENST00000506259.5@HNRNPAB	ENST00000506259.5	protein_coding	178204548,178205842,178206732,178207094,178209330,178210553	178205046,178206010,178206890,178207225,178209447,178211149	Gene ID= ENSG00000197451.11 TPM= 2.66 Transcript Type= protein_coding
chr5	178208584	178232802	178208584	178232802	-	transcript5118.chr5.nic@PHYKPL	transcript5118.chr5.nic	protein_coding	178231405,178229940,178225355,178224642,178224448,178222852,178222355,178215276,178214796,178212973,178211890,178208584	178232802,178230099,178225429,178224729,178224564,178222934,178222580,178215430,178214885,178213103,178211970,178208915	Gene ID= ENSG00000175309.14 TPM= 2.12 Transcript Type= NA
chr5	178208584	178232845	178208584	178232845	-	transcript5120.chr5.nic@PHYKPL	transcript5120.chr5.nic	protein_coding	178232492,178231405,178229940,178225355,178224642,178224448,178222852,178222355,178215276,178214796,178211890,178208584	178232845,178231523,178230099,178225429,178224729,178224564,178222934,178222580,178215430,178214885,178211970,178208915	Gene ID= ENSG00000175309.14 TPM= 3.19 Transcript Type= NA
chr5	178208497	178232785	178208497	178232785	-	ENST00000308158.9@PHYKPL	ENST00000308158.9	protein_coding	178232492,178231405,178229940,178225355,178224642,178224448,178222852,178222355,178215276,178214796,178212973,178211890,178208497	178232785,178231523,178230099,178225429,178224729,178224564,178222934,178222580,178215430,178214885,178213103,178211970,178208915	Gene ID= ENSG00000175309.14 TPM= 3.19 Transcript Type= protein_coding
chr5	178237618	178306921	178237618	178306921	-	transcript5085.chr5.nnic@COL23A1	transcript5085.chr5.nnic	protein_coding	178306871,178270337,178268730,178267307,178265655,178263208,178262217,178261722,178259721,178257523,178256866,178256353,178254949,178252544,178250061,178249117,178248192,178247775,178247526,178246391,178246254,178245942,178242341,178242042,178240461,178239141,178237618	178306921,178270363,178268756,178267333,178265726,178263324,178262252,178261748,178259747,178257567,178256928,178256397,178255026,178252597,178250105,178249206,178248254,178247831,178247552,178246453,178246307,178245968,178242394,178242128,178240538,178239179,178238700	Gene ID= ENSG00000050767.15 TPM= 11.98 Transcript Type= NA
chr5	178237618	178590555	178237618	178590555	-	ENST00000390654.7@COL23A1	ENST00000390654.7	protein_coding	178589904,178560682,178306875,178290362,178288324,178270337,178268730,178267307,178263208,178262217,178261722,178259721,178257523,178256866,178256353,178254949,178252544,178250061,178249117,178248192,178247775,178247526,178246391,178246254,178245942,178242341,178242042,178239141,178237618	178590555,178560748,178306919,178290369,178288350,178270363,178268756,178267333,178263324,178262252,178261748,178259747,178257567,178256928,178256397,178255026,178252597,178250105,178249206,178248254,178247831,178247552,178246453,178246307,178245968,178242394,178242128,178239179,178238700	Gene ID= ENSG00000050767.15 TPM= 5.1 Transcript Type= protein_coding
chr5	178237618	178306921	178237618	178306921	-	transcript5090.chr5.nnic@COL23A1	transcript5090.chr5.nnic	protein_coding	178306871,178270337,178268730,178267307,178263208,178262217,178261722,178259721,178257523,178256866,178256353,178254949,178252544,178250061,178249117,178248192,178247775,178247526,178246391,178246254,178245942,178242341,178242042,178240461,178239141,178237618	178306921,178270363,178268756,178267333,178263324,178262252,178261748,178259747,178257567,178256928,178256397,178255026,178252597,178250105,178249206,178248254,178247831,178247552,178246453,178246307,178245968,178242394,178242128,178240538,178239179,178238700	Gene ID= ENSG00000050767.15 TPM= 32.16 Transcript Type= NA
chr5	178237618	178306921	178237618	178306921	-	transcript5097.chr5.nnic@COL23A1	transcript5097.chr5.nnic	protein_coding	178306871,178270337,178268730,178267307,178263208,178262217,178261722,178259721,178257523,178256866,178256353,178254949,178250061,178249117,178248192,178247775,178247526,178246391,178246254,178245942,178242341,178242042,178240461,178239141,178237618	178306921,178270363,178268756,178267333,178263324,178262252,178261748,178259747,178257567,178256928,178256397,178255026,178250105,178249206,178248254,178247831,178247552,178246453,178246307,178245968,178242394,178242128,178240538,178239179,178238700	Gene ID= ENSG00000050767.15 TPM= 8.15 Transcript Type= NA
chr5	178237620	178306934	178237620	178306934	-	ENST00000407622.2@COL23A1	ENST00000407622.2	protein_coding	178306875,178270337,178268730,178267307,178263208,178262217,178261722,178259721,178257523,178256866,178256353,178254949,178252544,178250061,178249117,178248192,178247775,178247526,178246391,178246254,178245942,178242341,178242042,178239141,178237620	178306934,178270372,178268756,178267333,178263324,178262252,178261748,178259747,178257567,178256928,178256397,178255026,178252597,178250105,178249206,178248254,178247831,178247552,178246453,178246307,178245968,178242394,178242128,178239179,178238700	Gene ID= ENSG00000050767.15 TPM= 8.28 Transcript Type= protein_coding
chr5	178237618	178306921	178237618	178306921	-	transcript5102.chr5.nnic@COL23A1	transcript5102.chr5.nnic	protein_coding	178306871,178263208,178262217,178261722,178259721,178257523,178256866,178256353,178254949,178252544,178250061,178249117,178248192,178247775,178247526,178246391,178246254,178245942,178242341,178242042,178240461,178239141,178237618	178306921,178263324,178262252,178261748,178259747,178257567,178256928,178256397,178255026,178252597,178250105,178249206,178248254,178247831,178247552,178246453,178246307,178245968,178242394,178242128,178240538,178239179,178238700	Gene ID= ENSG00000050767.15 TPM= 14.11 Transcript Type= NA
chr5	178237618	178306921	178237618	178306921	-	transcript5105.chr5.nnic@COL23A1	transcript5105.chr5.nnic	protein_coding	178306871,178263208,178262217,178261722,178259721,178257523,178256866,178256353,178252544,178250061,178249117,178248192,178247775,178247526,178246391,178246254,178245942,178242341,178242042,178240461,178239141,178237618	178306921,178263324,178262252,178261748,178259747,178257567,178256928,178256397,178252597,178250105,178249206,178248254,178247831,178247552,178246453,178246307,178245968,178242394,178242128,178240538,178239179,178238700	Gene ID= ENSG00000050767.15 TPM= 6.18 Transcript Type= NA
chr5	178603399	178627038	178603399	178627038	-	transcript5146.chr5.nic@CLK4	transcript5146.chr5.nic	protein_coding	178626946,178623256,178619838,178618556,178617344,178616882,178613727,178613473,178612796,178612416,178608376,178605303,178603844,178603399	178627038,178623416,178619896,178618778,178617434,178616948,178613843,178613639,178612890,178612545,178608458,178605382,178603934,178603757	Gene ID= ENSG00000113240.12 TPM= 2.12 Transcript Type= NA
chr5	178602664	178627114	178602664	178627114	-	ENST00000316308.8@CLK4	ENST00000316308.8	protein_coding	178626946,178623256,178618556,178617344,178616882,178613727,178613473,178612796,178612416,178608376,178605303,178603844,178602664	178627114,178623416,178618778,178617434,178616948,178613843,178613639,178612890,178612545,178608458,178605382,178603934,178603757	Gene ID= ENSG00000113240.12 TPM= 5.31 Transcript Type= protein_coding
chr5	178603270	178627028	178603270	178627028	-	transcript5153.chr5.nic@CLK4	transcript5153.chr5.nic	protein_coding	178626946,178623256,178618556,178616882,178613727,178613473,178612796,178612416,178608376,178605303,178603844,178603270	178627028,178623416,178618778,178616948,178613843,178613639,178612890,178612545,178608458,178605382,178603934,178603757	Gene ID= ENSG00000113240.12 TPM= 2.12 Transcript Type= NA
chr5	178621812	178627030	178621812	178627030	-	ENST00000520957.1@CLK4	ENST00000520957.1	protein_coding	178626946,178621812	178627030,178623416	Gene ID= ENSG00000113240.12 TPM= 1.06 Transcript Type= protein_coding
chr5	178711592	178730702	178711592	178730702	-	ENST00000335815.6@ZNF354A	ENST00000335815.6	protein_coding	178730556,178728990,178726999,178725376,178711592	178730702,178729073,178727125,178725471,178713621	Gene ID= ENSG00000169131.11 TPM= 9.56 Transcript Type= protein_coding
chr5	178859953	178885028	178859953	178885028	+	ENST00000322434.7@ZNF354B	ENST00000322434.7	protein_coding	178859953,178860997,178866244,178866976,178882709	178860127,178861080,178866370,178867071,178885028	Gene ID= ENSG00000178338.10 TPM= 3.19 Transcript Type= protein_coding
chr5	178895894	178933212	178895894	178933212	+	ENST00000361362.6@ZFP2	ENST00000361362.6	protein_coding	178895894,178912584,178912982,178916565,178931237	178895974,178912719,178913071,178916710,178933212	Gene ID= ENSG00000198939.7 TPM= 1.06 Transcript Type= protein_coding
chr5	178895906	178933207	178895906	178933207	+	transcript5170.chr5.nnic@ZFP2	transcript5170.chr5.nnic	protein_coding	178895906,178898579,178931237	178895974,178898675,178933207	Gene ID= ENSG00000198939.7 TPM= 2.12 Transcript Type= NA
chr5	179023752	179035064	179023752	179035064	+	ENST00000444149.6@ZNF879	ENST00000444149.6	protein_coding	179023752,179024970,179027473,179028032,179032205	179023904,179025037,179027599,179028127,179035064	Gene ID= ENSG00000234284.6 TPM= 1.06 Transcript Type= protein_coding
chr5	179060415	179083537	179060415	179083537	+	ENST00000315475.6@ZNF354C	ENST00000315475.6	protein_coding	179060415,179062015,179076445,179077071,179078683	179060666,179062095,179076571,179077166,179083537	Gene ID= ENSG00000177932.6 TPM= 5.31 Transcript Type= protein_coding
chr5	179120172	179122767	179120172	179122767	-	ENST00000518335.2@ADAMTS2	ENST00000518335.2	protein_coding	179122644,179120172	179122767,179121750	Gene ID= ENSG00000087116.14 TPM= 1.06 Transcript Type= protein_coding
chr5	179529296	179530758	179529296	179530758	-	transcript5178.chr5.nnic@NA	transcript5178.chr5.nnic	NA	179529296	179530758	Gene ID= novel_gene_chr5_5179 TPM= 2.12 Transcript Type= NA
chr5	179550562	179610012	179550562	179610012	+	transcript5182.chr5.nic@RUFY1	transcript5182.chr5.nic	protein_coding	179550562,179555650,179560025,179562547,179567461,179569302,179577075,179580947,179585796,179589546,179591625,179593478,179594866,179596562,179598692,179601892,179605876,179607582,179609376	179550879,179555790,179560198,179562664,179567562,179569425,179577136,179581012,179585865,179589647,179591741,179593645,179594963,179596681,179598821,179601986,179605924,179607659,179610012	Gene ID= ENSG00000176783.14 TPM= 6.39 Transcript Type= NA
chr5	179559692	179610012	179559692	179610012	+	ENST00000393438.6@RUFY1	ENST00000393438.6	protein_coding	179559692,179560025,179562547,179567461,179569302,179577075,179580947,179585796,179589546,179591625,179593478,179594866,179596562,179598692,179601892,179605876,179607582,179609376	179559835,179560198,179562664,179567562,179569425,179577136,179581012,179585865,179589647,179591741,179593645,179594963,179596681,179598821,179601986,179605924,179607659,179610012	Gene ID= ENSG00000176783.14 TPM= 5.33 Transcript Type= protein_coding
chr5	179550551	179610012	179550551	179610012	+	transcript5188.chr5.nic@RUFY1	transcript5188.chr5.nic	protein_coding	179550551,179560025,179562547,179567461,179569302,179577075,179585796,179589546,179591625,179593478,179594866,179596562,179598692,179601892,179605876,179607582,179609376	179550879,179560198,179562664,179567562,179569425,179577136,179585865,179589647,179591741,179593645,179594963,179596681,179598821,179601986,179605924,179607659,179610012	Gene ID= ENSG00000176783.14 TPM= 5.68 Transcript Type= NA
chr5	179559692	179610011	179559692	179610011	+	ENST00000437570.6@RUFY1	ENST00000437570.6	protein_coding	179559692,179562547,179567461,179569302,179577075,179580947,179585796,179589546,179591625,179593478,179594866,179596562,179598692,179601892,179605876,179607582,179609376	179560198,179562664,179567562,179569425,179577136,179581012,179585865,179589647,179591741,179593645,179594963,179596681,179598821,179601986,179605924,179607659,179610011	Gene ID= ENSG00000176783.14 TPM= 3.82 Transcript Type= protein_coding
chr5	179550558	179610026	179550558	179610026	+	ENST00000319449.8@RUFY1	ENST00000319449.8	protein_coding	179550558,179560025,179562547,179567461,179569302,179577075,179580947,179585796,179589546,179591625,179593478,179594866,179596562,179598692,179601892,179605876,179607582,179609376	179550879,179560198,179562664,179567562,179569425,179577136,179581012,179585865,179589647,179591741,179593645,179594963,179596681,179598821,179601986,179605924,179607659,179610026	Gene ID= ENSG00000176783.14 TPM= 30.82 Transcript Type= protein_coding
chr5	179614178	179623710	179614178	179623710	-	ENST00000393432.8@HNRNPH1	ENST00000393432.8	protein_coding	179623595,179623037,179621242,179620892,179619269,179618145,179617989,179617799,179617514,179617051,179616869,179616126,179615546,179614178	179623710,179623164,179621397,179621035,179619407,179618323,179618060,179617932,179617649,179617110,179616958,179616218,179615595,179614959	Gene ID= ENSG00000169045.17 TPM= 17.88 Transcript Type= protein_coding
chr5	179614179	179623721	179614179	179623721	-	ENST00000442819.6@HNRNPH1	ENST00000442819.6	protein_coding	179623636,179623037,179621242,179620892,179619269,179618145,179617989,179617799,179617514,179617051,179616869,179616126,179615546,179614179	179623721,179623164,179621397,179621035,179619407,179618323,179618060,179617932,179617649,179617110,179616958,179616218,179615595,179614959	Gene ID= ENSG00000169045.17 TPM= 20 Transcript Type= protein_coding
chr5	179614181	179623669	179614181	179623669	-	transcript5197.chr5.nic@HNRNPH1	transcript5197.chr5.nic	protein_coding	179623636,179623037,179621242,179620892,179619269,179618145,179617989,179617799,179617514,179617051,179616869,179616126,179614181	179623669,179623164,179621397,179621035,179619407,179618323,179618060,179617932,179617649,179617110,179616958,179616218,179614959	Gene ID= ENSG00000169045.17 TPM= 12.03 Transcript Type= NA
chr5	179698906	179730925	179698906	179730925	+	ENST00000247461.8@CANX	ENST00000247461.8	protein_coding	179698906,179705679,179706258,179707132,179708239,179708978,179709873,179716105,179719668,179720404,179722804,179723660,179724657,179726680,179728591	179699102,179705852,179706331,179707190,179708380,179709059,179710065,179716294,179719781,179720560,179723019,179723779,179724783,179726759,179730925	Gene ID= ENSG00000127022.14 TPM= 291.03 Transcript Type= protein_coding
chr5	179698906	179730925	179698906	179730925	+	ENST00000452673.6@CANX	ENST00000452673.6	protein_coding	179698906,179705679,179706258,179707132,179708239,179708978,179709873,179716105,179719668,179720404,179722804,179723660,179724657,179726680,179728591	179699049,179705852,179706331,179707190,179708380,179709059,179710065,179716294,179719781,179720560,179723019,179723779,179724783,179726759,179730925	Gene ID= ENSG00000127022.14 TPM= 28.68 Transcript Type= protein_coding
chr5	179732822	179771565	179732822	179771565	+	transcript5237.chr5.nic@MAML1	transcript5237.chr5.nic	protein_coding	179732822,179765326,179768850,179771147	179733427,179766741,179769089,179771565	Gene ID= ENSG00000161021.12 TPM= 2.12 Transcript Type= NA
chr5	179732850	179777286	179732850	179777286	+	ENST00000292599.3@MAML1	ENST00000292599.3	protein_coding	179732850,179765326,179768850,179771147,179773895	179733427,179766741,179769089,179771243,179777286	Gene ID= ENSG00000161021.12 TPM= 13.81 Transcript Type= protein_coding
chr5	179793980	179796511	179793980	179796511	+	transcript5290.chr5.nnic@NA	transcript5290.chr5.nnic	NA	179793980	179796511	Gene ID= novel_gene_chr5_5291 TPM= 5.31 Transcript Type= NA
chr5	179793980	179796647	179793980	179796647	+	ENST00000465572.6@LTC4S	ENST00000465572.6	protein_coding	179793980,179795584,179795941,179796253	179794138,179795856,179796022,179796647	Gene ID= ENSG00000213316.9 TPM= 5.31 Transcript Type= retained_intron
chr5	179793980	179796512	179793980	179796512	+	transcript5284.chr5.nic@LTC4S	transcript5284.chr5.nic	protein_coding	179793980,179795584,179796253	179794138,179796022,179796512	Gene ID= ENSG00000213316.9 TPM= 4.25 Transcript Type= NA
chr5	179793993	179796510	179793993	179796510	+	ENST00000401985.3@LTC4S	ENST00000401985.3	protein_coding	179793993,179795941,179796253	179794138,179796022,179796510	Gene ID= ENSG00000213316.9 TPM= 1.06 Transcript Type= protein_coding
chr5	179793986	179796512	179793986	179796512	+	ENST00000292596.14@LTC4S	ENST00000292596.14	protein_coding	179793986,179795584,179795786,179795941,179796253	179794138,179795683,179795856,179796022,179796512	Gene ID= ENSG00000213316.9 TPM= 9.56 Transcript Type= protein_coding
chr5	179797610	179806893	179797610	179806893	-	transcript5244.chr5.nnic@MGAT4B	transcript5244.chr5.nnic	protein_coding	179806694,179806487,179801784,179801554,179801334,179800907,179800484,179800184,179799954,179799506,179799203,179798928,179798513,179798347,179798165,179797610	179806893,179806629,179801969,179801694,179801467,179800953,179800597,179800259,179800068,179799636,179799310,179799121,179798591,179798434,179798277,179798068	Gene ID= ENSG00000161013.16 TPM= 42.67 Transcript Type= NA
chr5	179797610	179806982	179797610	179806982	-	transcript5247.chr5.nic@MGAT4B	transcript5247.chr5.nic	protein_coding	179806487,179801784,179801554,179801334,179800907,179800484,179800184,179799954,179799506,179799203,179798928,179798513,179798347,179798165,179797610	179806982,179801969,179801694,179801467,179800953,179800597,179800259,179800068,179799636,179799310,179799121,179798576,179798434,179798277,179798068	Gene ID= ENSG00000161013.16 TPM= 10.27 Transcript Type= NA
chr5	179797597	179806934	179797597	179806934	-	ENST00000292591.11@MGAT4B	ENST00000292591.11	protein_coding	179806487,179801784,179801554,179801334,179800907,179800484,179800184,179799954,179799506,179799203,179798928,179798513,179798347,179798165,179797597	179806934,179801969,179801694,179801467,179800953,179800597,179800259,179800068,179799636,179799310,179799121,179798591,179798434,179798277,179798068	Gene ID= ENSG00000161013.16 TPM= 190.31 Transcript Type= protein_coding
chr5	179820759	179838078	179820759	179838078	+	ENST00000389805.8@SQSTM1	ENST00000389805.8	protein_coding	179820759,179822958,179823858,179824182,179825146,179833032,179833587,179836436	179821141,179823053,179824087,179824323,179825226,179833246,179833782,179838078	Gene ID= ENSG00000161011.19 TPM= 270.53 Transcript Type= protein_coding
chr5	179835060	179839265	179835060	179839265	+	transcript5292.chr5.nnic@NA	transcript5292.chr5.nnic	NA	179835060	179839265	Gene ID= novel_gene_chr5_5293 TPM= 4.25 Transcript Type= NA
chr5	179837276	179858887	179837276	179858887	-	ENST00000292586.10@MRNIP	ENST00000292586.10	protein_coding	179858731,179853378,179847978,179844152,179841907,179840872,179837276	179858887,179853437,179848066,179844227,179842064,179840959,179837885	Gene ID= ENSG00000161010.14 TPM= 16.99 Transcript Type= protein_coding
chr5	179837276	179858808	179837276	179858808	-	ENST00000518219.5@MRNIP	ENST00000518219.5	protein_coding	179858731,179853378,179847978,179844152,179841907,179837276	179858808,179853437,179848066,179844227,179842064,179840959	Gene ID= ENSG00000161010.14 TPM= 3.19 Transcript Type= protein_coding
chr5	179859013	179861283	179859013	179861283	+	ENST00000499601.2@AC008393.1	ENST00000499601.2	lincRNA	179859013,179860030	179859212,179861283	Gene ID= ENSG00000245317.2 TPM= 1.06 Transcript Type= lincRNA
chr5	179862066	179907856	179862066	179907856	-	ENST00000355235.7@TBC1D9B	ENST00000355235.7	protein_coding	179907704,179904702,179899189,179894386,179893209,179891379,179888103,179879628,179879047,179878309,179875920,179874902,179873119,179872892,179871462,179870255,179869769,179867778,179865838,179865254,179862066	179907856,179904812,179899307,179894614,179893467,179891586,179888312,179879789,179879197,179878523,179876037,179875187,179873248,179872990,179871530,179870495,179869834,179867849,179865888,179865360,179864128	Gene ID= ENSG00000197226.12 TPM= 17.53 Transcript Type= protein_coding
chr5	179862066	179907859	179862066	179907859	-	ENST00000356834.7@TBC1D9B	ENST00000356834.7	protein_coding	179907704,179904702,179899189,179894386,179893209,179891379,179888103,179879628,179879047,179878309,179875920,179874902,179873119,179872892,179871462,179870255,179869769,179867778,179867445,179865838,179865254,179862066	179907859,179904812,179899307,179894614,179893467,179891586,179888312,179879789,179879197,179878523,179876037,179875187,179873248,179872990,179871530,179870495,179869834,179867849,179867495,179865888,179865360,179864128	Gene ID= ENSG00000197226.12 TPM= 16.46 Transcript Type= protein_coding
chr5	180010906	180071727	180010906	180071727	-	transcript5311.chr5.nic@RNF130	transcript5311.chr5.nic	protein_coding	180071456,180040453,180010906	180071727,180040647,180013311	Gene ID= ENSG00000113269.13 TPM= 3.19 Transcript Type= NA
chr5	180233594	180292056	180233594	180292056	-	ENST00000393360.7@MAPK9	ENST00000393360.7	protein_coding	180291848,180280440,180269280,180264781,180261684,180248973,180247439,180242573,180241031,180239924,180238332,180233594	180292056,180280608,180269409,180264839,180261822,180249138,180247510,180242755,180241155,180239987,180238403,180236531	Gene ID= ENSG00000050748.17 TPM= 33.99 Transcript Type= protein_coding
chr5	180246028	180291967	180246028	180291967	-	ENST00000425491.6@MAPK9	ENST00000425491.6	protein_coding	180291848,180280440,180269280,180264781,180261684,180248973,180246028	180291967,180280608,180269409,180264839,180261822,180249138,180247510	Gene ID= ENSG00000050748.17 TPM= 1.06 Transcript Type= protein_coding
chr5	180300690	180353387	180300690	180353387	-	ENST00000253778.12@GFPT2	ENST00000253778.12	protein_coding	180353211,180338493,180336479,180335828,180331495,180330700,180328277,180324816,180324188,180318793,180316963,180316764,180316341,180313807,180312430,180307176,180304772,180302423,180300690	180353387,180338600,180336577,180335953,180331553,180330834,180328338,180324895,180324305,180318956,180317058,180316861,180316461,180313964,180312544,180307303,180304939,180302584,180301608	Gene ID= ENSG00000131459.12 TPM= 11.68 Transcript Type= protein_coding
chr5	180590103	180591540	180590103	180591540	-	ENST00000292641.3@SCGB3A1	ENST00000292641.3	protein_coding	180591411,180590600,180590103	180591540,180590838,180590254	Gene ID= ENSG00000161055.3 TPM= 1.06 Transcript Type= protein_coding
chr5	180784782	180815541	180784782	180815541	-	ENST00000333055.8@MGAT1	ENST00000333055.8	protein_coding	180815414,180808648,180784782	180815541,180809066,180793097	Gene ID= ENSG00000131446.16 TPM= 6.37 Transcript Type= protein_coding
chr5	180790543	180802885	180790543	180802885	-	ENST00000307826.4@MGAT1	ENST00000307826.4	protein_coding	180802680,180790543	180802885,180793097	Gene ID= ENSG00000131446.16 TPM= 157.2 Transcript Type= protein_coding
chr5	180813090	180815736	180813090	180815736	-	transcript5369.chr5.nnic@NA	transcript5369.chr5.nnic	NA	180813090	180815736	Gene ID= novel_gene_chr5_5370 TPM= 3.19 Transcript Type= NA
chr5	180829954	180831605	180829954	180831605	-	ENST00000623091.1@HEIH	ENST00000623091.1	TEC	180829954	180831605	Gene ID= ENSG00000278970.1 TPM= 37.18 Transcript Type= TEC
chr5	180830957	180835726	180830957	180835726	+	ENST00000501855.6@LINC00847	ENST00000501855.6	lincRNA	180830957,180831759,180834312	180831229,180831941,180835726	Gene ID= ENSG00000245060.6 TPM= 2.12 Transcript Type= lincRNA
chr5	180847615	180861276	180847615	180861276	-	ENST00000512132.5@ZFP62	ENST00000512132.5	protein_coding	180861219,180851988,180847615	180861276,180852060,180851493	Gene ID= ENSG00000196670.13 TPM= 4.25 Transcript Type= protein_coding
chr5	181040225	181061523	181040225	181061523	+	ENST00000327705.13@BTNL9	ENST00000327705.13	protein_coding	181040225,181045467,181047927,181050088,181053200,181053469,181054239,181055433,181055989,181058352,181059237	181040432,181045598,181048271,181050369,181053316,181053501,181054259,181055453,181056015,181058378,181061523	Gene ID= ENSG00000165810.16 TPM= 13.28 Transcript Type= protein_coding
chr5	181052946	181061523	181052946	181061523	+	transcript5397.chr5.nic@BTNL9	transcript5397.chr5.nic	protein_coding	181052946,181053469,181054239,181055433,181055989,181058352,181059237	181053316,181053501,181054259,181055453,181056015,181058378,181061523	Gene ID= ENSG00000165810.16 TPM= 11.15 Transcript Type= NA
chr5	181052793	181055777	181052793	181055777	+	transcript5405.chr5.nnic@NA	transcript5405.chr5.nnic	NA	181052793	181055777	Gene ID= novel_gene_chr5_5406 TPM= 2.12 Transcript Type= NA
chr5	181191890	181194428	181191890	181194428	+	transcript5412.chr5.nnic@AC008443.5	transcript5412.chr5.nnic	antisense_RNA	181191890,181193342,181194234	181192016,181193467,181194428	Gene ID= ENSG00000250222.1 TPM= 5.31 Transcript Type= NA
chr5	181192042	181194428	181192042	181194428	+	transcript5413.chr5.nnic@AC008443.5	transcript5413.chr5.nnic	antisense_RNA	181192042,181193342,181194234	181192192,181193467,181194428	Gene ID= ENSG00000250222.1 TPM= 3.19 Transcript Type= NA
chr5	181192034	181194429	181192034	181194429	+	transcript5416.chr5.nnic@AC008443.5	transcript5416.chr5.nnic	antisense_RNA	181192034,181194234	181192140,181194429	Gene ID= ENSG00000250222.1 TPM= 6.72 Transcript Type= NA
chr5	181192056	181194426	181192056	181194426	+	transcript5417.chr5.nnic@AC008443.5	transcript5417.chr5.nnic	antisense_RNA	181192056,181194234	181192192,181194426	Gene ID= ENSG00000250222.1 TPM= 8.85 Transcript Type= NA
chr5	181191924	181194429	181191924	181194429	+	ENST00000514487.1@AC008443.5	ENST00000514487.1	antisense_RNA	181191924,181194234	181192016,181194429	Gene ID= ENSG00000250222.1 TPM= 7.79 Transcript Type= antisense_RNA
chr5	181193924	181205172	181193924	181205172	-	ENST00000274773.11@TRIM7	ENST00000274773.11	protein_coding	181204589,181203545,181199851,181199095,181198690,181198183,181193924	181205172,181203640,181200081,181199117,181198805,181198218,181195677	Gene ID= ENSG00000146054.17 TPM= 5.31 Transcript Type= protein_coding
chr5	181223290	181235808	181223290	181235808	+	ENST00000351937.9@TRIM41	ENST00000351937.9	protein_coding	181223290,181230744,181232659,181233413,181233636,181234174,181234932,181235354	181224812,181230839,181232889,181233435,181233763,181234349,181234995,181235808	Gene ID= ENSG00000146063.19 TPM= 16.99 Transcript Type= protein_coding
chr5	181236909	181243916	181236909	181243916	-	ENST00000511473.5@RACK1	ENST00000511473.5	protein_coding	181243680,181242174,181241492,181239487,181239067,181238099,181237609,181236909	181243916,181242345,181241639,181239582,181239177,181238239,181237719,181237042	Gene ID= ENSG00000204628.11 TPM= 14.69 Transcript Type= nonsense_mediated_decay
chr5	181236937	181244209	181236937	181244209	-	ENST00000512805.5@RACK1	ENST00000512805.5	protein_coding	181243692,181242174,181241492,181239487,181239067,181238099,181237609,181236937	181244209,181242345,181241639,181239582,181239177,181238239,181237719,181237042	Gene ID= ENSG00000204628.11 TPM= 545.6 Transcript Type= protein_coding
chr5	181250482	181254387	181250482	181254387	-	transcript5441.chr5.nnic@NA	transcript5441.chr5.nnic	NA	181250482	181254387	Gene ID= novel_gene_chr5_5442 TPM= 2.12 Transcript Type= NA
chr5	181261191	181264570	181261191	181264570	+	transcript5433.chr5.nic@TRIM52-AS1	transcript5433.chr5.nic	processed_transcript	181261191,181263628,181264052	181261384,181263766,181264570	Gene ID= ENSG00000248275.1 TPM= 3.19 Transcript Type= NA
chr5	181261222	181272307	181261222	181272307	+	ENST00000507434.1@TRIM52-AS1	ENST00000507434.1	processed_transcript	181261222,181271573,181271916	181261384,181271689,181272307	Gene ID= ENSG00000248275.1 TPM= 2.12 Transcript Type= antisense_RNA
chr5	181261212	181264261	181261212	181264261	+	ENST00000514146.1@TRIM52-AS1	ENST00000514146.1	processed_transcript	181261212,181263628	181261384,181264261	Gene ID= ENSG00000248275.1 TPM= 7.44 Transcript Type= lincRNA
chr5	181261224	181264257	181261224	181264257	+	ENST00000509252.1@TRIM52-AS1	ENST00000509252.1	processed_transcript	181261224,181263628,181264052	181261384,181263789,181264257	Gene ID= ENSG00000248275.1 TPM= 2.12 Transcript Type= antisense_RNA
chr6	292097	351355	292097	351355	+	ENST00000344450.9@DUSP22	ENST00000344450.9	protein_coding	292097,304628,311880,335114,345854,348103,348769,350822	292560,304661,311962,335163,345928,348274,348841,351355	Gene ID= ENSG00000112679.14 TPM= 13.81 Transcript Type= protein_coding
chr6	292462	351353	292462	351353	+	ENST00000419235.6@DUSP22	ENST00000419235.6	protein_coding	292462,304628,311880,335114,345854,348103,348769	292560,304661,311962,335163,345928,348274,351353	Gene ID= ENSG00000112679.14 TPM= 16.99 Transcript Type= protein_coding
chr6	485133	693128	485133	693128	-	transcript15.chr6.nnic@EXOC2	transcript15.chr6.nnic	protein_coding	693019,689139,637701,632941,629835,619430,617711,610098,599080,598860,598021,592469,576757,572520,564864,564545,564033,562784,556484,555954,555227,553854,549175,532469,499645,497367,491125,488979,485133	693128,689212,637861,633117,629961,619543,617835,610178,599225,598941,598123,592587,576882,572644,564929,564702,564154,562845,556564,556013,555288,553920,549291,532610,499700,497489,491186,489038,486764	Gene ID= ENSG00000112685.13 TPM= 3.19 Transcript Type= NA
chr6	485133	693111	485133	693111	-	ENST00000230449.8@EXOC2	ENST00000230449.8	protein_coding	693019,637701,632941,629835,619430,617711,610098,599080,598860,598021,592469,576757,572520,564864,564545,564033,562784,556484,555954,555227,553854,549175,532469,499645,497367,491125,488979,485133	693111,637861,633117,629961,619543,617835,610178,599225,598941,598123,592587,576882,572644,564929,564702,564154,562845,556564,556013,555288,553920,549291,532610,499700,497489,491186,489038,486764	Gene ID= ENSG00000112685.13 TPM= 31.86 Transcript Type= protein_coding
chr6	1389834	1395597	1389834	1395597	+	ENST00000259806.1@FOXF2	ENST00000259806.1	protein_coding	1389834,1394696	1391118,1395597	Gene ID= ENSG00000137273.3 TPM= 2.12 Transcript Type= protein_coding
chr6	1609972	1613897	1609972	1613897	+	ENST00000380874.3@FOXC1	ENST00000380874.3	protein_coding	1609972	1613897	Gene ID= ENSG00000054598.6 TPM= 11.68 Transcript Type= protein_coding
chr6	1623806	2245692	1623806	2245692	-	ENST00000380815.4@GMDS	ENST00000380815.4	protein_coding	2245321,2124687,2117469,2115771,1960774,1959867,1930103,1742468,1726416,1624472,1623806	2245692,2124731,2117556,2115880,1960966,1959971,1930230,1742586,1726512,1624540,1624231	Gene ID= ENSG00000112699.10 TPM= 9.56 Transcript Type= protein_coding
chr6	1926744	1928378	1926744	1928378	+	transcript38.chr6.nnic@NA	transcript38.chr6.nnic	NA	1926744	1928378	Gene ID= novel_gene_chr6_39 TPM= 2.12 Transcript Type= NA
chr6	2458874	2460731	2458874	2460731	+	transcript49.chr6.nnic@NA	transcript49.chr6.nnic	NA	2458874	2460731	Gene ID= novel_gene_chr6_50 TPM= 4.25 Transcript Type= NA
chr6	2719693	2766107	2719693	2766107	-	transcript61.chr6.nnic@MYLK4	transcript61.chr6.nnic	protein_coding	2765347,2749136,2721716,2721036,2719693	2766107,2749406,2721863,2721153,2720399	Gene ID= ENSG00000145949.9 TPM= 2.12 Transcript Type= NA
chr6	2765429	2785745	2765429	2785745	+	transcript60.chr6.nnic@WRNIP1	transcript60.chr6.nnic	protein_coding	2765429,2779263,2783406,2784324,2785007	2766444,2779492,2783561,2784403,2785745	Gene ID= ENSG00000124535.15 TPM= 5.84 Transcript Type= NA
chr6	2765414	2785745	2765414	2785745	+	ENST00000380771.8@WRNIP1	ENST00000380771.8	protein_coding	2765414,2768691,2770195,2779263,2783406,2784324,2785007	2766444,2768882,2770361,2779492,2783561,2784403,2785745	Gene ID= ENSG00000124535.15 TPM= 12.21 Transcript Type= protein_coding
chr6	2832332	2842006	2832332	2842006	-	ENST00000380739.5@SERPINB1	ENST00000380739.5	protein_coding	2841812,2840419,2838549,2837882,2836108,2835856,2832332	2842006,2840594,2838686,2837999,2836250,2836023,2834012	Gene ID= ENSG00000021355.12 TPM= 20.18 Transcript Type= protein_coding
chr6	2948160	2972165	2948160	2972165	-	ENST00000616722.3@SERPINB6	ENST00000616722.3	protein_coding	2971533,2968779,2959168,2955524,2954592,2953044,2948914,2948160	2972165,2968913,2959342,2955670,2954709,2953186,2949069,2948699	Gene ID= ENSG00000124570.17 TPM= 5.42 Transcript Type= protein_coding
chr6	2948159	2971856	2948159	2971856	-	ENST00000335686.9@SERPINB6	ENST00000335686.9	protein_coding	2971533,2959168,2955524,2954592,2953044,2948914,2948159	2971856,2959342,2955670,2954709,2953186,2949069,2948699	Gene ID= ENSG00000124570.17 TPM= 142.31 Transcript Type= protein_coding
chr6	2948160	2971759	2948160	2971759	-	transcript93.chr6.nnic@SERPINB6	transcript93.chr6.nnic	protein_coding	2971533,2955524,2954592,2953044,2948914,2948160	2971759,2955670,2954709,2953186,2949069,2948699	Gene ID= ENSG00000124570.17 TPM= 9.79 Transcript Type= NA
chr6	2948159	2971305	2948159	2971305	-	ENST00000380539.5@SERPINB6	ENST00000380539.5	protein_coding	2971248,2959168,2955524,2954592,2953044,2948914,2948159	2971305,2959342,2955670,2954709,2953186,2949069,2948699	Gene ID= ENSG00000124570.17 TPM= 28.66 Transcript Type= protein_coding
chr6	2948159	2971585	2948159	2971585	-	ENST00000380546.7@SERPINB6	ENST00000380546.7	protein_coding	2971491,2959168,2955524,2954592,2953044,2948914,2948159	2971585,2959342,2955670,2954709,2953186,2949069,2948699	Gene ID= ENSG00000124570.17 TPM= 13.79 Transcript Type= protein_coding
chr6	2948159	2971206	2948159	2971206	-	ENST00000380529.5@SERPINB6	ENST00000380529.5	protein_coding	2971117,2959168,2955524,2954592,2953044,2948914,2948159	2971206,2959342,2955670,2954709,2953186,2949069,2948699	Gene ID= ENSG00000124570.17 TPM= 5.29 Transcript Type= protein_coding
chr6	2966326	2968411	2966326	2968411	-	transcript96.chr6.nnic@NA	transcript96.chr6.nnic	NA	2966326	2968411	Gene ID= novel_gene_chr6_97 TPM= 2.12 Transcript Type= NA
chr6	2988648	2991173	2988648	2991173	+	ENST00000605901.1@LINC01011	ENST00000605901.1	lincRNA	2988648,2989528,2989869	2988709,2989733,2991173	Gene ID= ENSG00000244041.7 TPM= 5.31 Transcript Type= lincRNA
chr6	2988602	3019755	2988602	3019755	+	transcript100.chr6.nic@NQO2	transcript100.chr6.nic	protein_coding	2988602,2993931,3006468,3010025,3012544,3015530,3016884,3019479	2988709,2994053,3006559,3010189,3012674,3015643,3016985,3019755	Gene ID= ENSG00000124588.19 TPM= 5.93 Transcript Type= NA
chr6	2999829	3019755	2999829	3019755	+	transcript101.chr6.nic@NQO2	transcript101.chr6.nic	protein_coding	2999829,3003669,3006468,3010025,3012544,3015530,3016884,3019479	3000085,3003789,3006559,3010189,3012674,3015643,3016985,3019755	Gene ID= ENSG00000124588.19 TPM= 4.86 Transcript Type= NA
chr6	2999829	3019755	2999829	3019755	+	transcript102.chr6.nic@NQO2	transcript102.chr6.nic	protein_coding	2999829,3003669,3006468,3010025,3012544,3015530,3016884,3019479	3000085,3004259,3006559,3010189,3012674,3015643,3016985,3019755	Gene ID= ENSG00000124588.19 TPM= 2.39 Transcript Type= NA
chr6	2999837	3019755	2999837	3019755	+	transcript103.chr6.nic@NQO2	transcript103.chr6.nic	protein_coding	2999837,3004495,3006468,3010025,3012544,3015530,3016884,3019479	3000085,3004651,3006559,3010189,3012674,3015643,3016985,3019755	Gene ID= ENSG00000124588.19 TPM= 3.8 Transcript Type= NA
chr6	2999904	3018560	2999904	3018560	+	transcript106.chr6.nnic@NQO2	transcript106.chr6.nnic	protein_coding	2999904,3006468,3010025,3012544,3015530,3016884,3018193	3000085,3006559,3010189,3012674,3015643,3016985,3018560	Gene ID= ENSG00000124588.19 TPM= 4.25 Transcript Type= NA
chr6	2988602	2994402	2988602	2994402	+	transcript112.chr6.nnic@NQO2	transcript112.chr6.nnic	protein_coding	2988602,2993931,2994278	2988709,2994053,2994402	Gene ID= ENSG00000124588.19 TPM= 5.31 Transcript Type= NA
chr6	3017881	3019761	3017881	3019761	+	transcript116.chr6.nnic@NA	transcript116.chr6.nnic	NA	3017881	3019761	Gene ID= novel_gene_chr6_117 TPM= 2.12 Transcript Type= NA
chr6	3068518	3115187	3068518	3115187	+	transcript119.chr6.nnic@RIPK1	transcript119.chr6.nnic	protein_coding	3068518,3076764,3077779,3080979,3082547,3083085,3085259,3089581,3104225,3105482,3110803,3113053	3068661,3076987,3077935,3081116,3082660,3083313,3085408,3089657,3104315,3106051,3110955,3115187	Gene ID= ENSG00000137275.13 TPM= 4.07 Transcript Type= NA
chr6	3063967	3115187	3063967	3115187	+	transcript122.chr6.nnic@RIPK1	transcript122.chr6.nnic	protein_coding	3063967,3076764,3077779,3080979,3083085,3085259,3089581,3104225,3105482,3110803,3113053	3064059,3076987,3077935,3081116,3083313,3085408,3089657,3104315,3106051,3110955,3115187	Gene ID= ENSG00000137275.13 TPM= 3.01 Transcript Type= NA
chr6	3068424	3115185	3068424	3115185	+	ENST00000259808.8@RIPK1	ENST00000259808.8	protein_coding	3068424,3076764,3077779,3080979,3083085,3085259,3089581,3104225,3105482,3110803,3113053	3068661,3076987,3077935,3081116,3083313,3085408,3089657,3104315,3106051,3110955,3115185	Gene ID= ENSG00000137275.13 TPM= 1.41 Transcript Type= protein_coding
chr6	3068045	3068894	3068045	3068894	-	ENST00000606441.1@AL031963.3	ENST00000606441.1	antisense_RNA	3068045	3068894	Gene ID= ENSG00000272277.1 TPM= 3.19 Transcript Type= antisense_RNA
chr6	3118692	3153578	3118692	3153578	+	ENST00000380379.9@BPHL	ENST00000380379.9	protein_coding	3118692,3123657,3127242,3129045,3137362,3140386,3152488	3118847,3123760,3127408,3129198,3137493,3140509,3153578	Gene ID= ENSG00000137274.12 TPM= 10.62 Transcript Type= protein_coding
chr6	3118705	3138783	3118705	3138783	+	transcript137.chr6.nic@BPHL	transcript137.chr6.nic	protein_coding	3118705,3123657,3127242,3129045,3137362,3138041	3118847,3123760,3127408,3129198,3137493,3138783	Gene ID= ENSG00000137274.12 TPM= 2.12 Transcript Type= NA
chr6	3153669	3157526	3153669	3157526	-	ENST00000333628.3@TUBB2A	ENST00000333628.3	protein_coding	3157407,3156044,3155625,3153669	3157526,3156152,3155735,3154923	Gene ID= ENSG00000137267.5 TPM= 37.18 Transcript Type= protein_coding
chr6	3258952	3267781	3258952	3267781	+	ENST00000419065.6@PSMG4	ENST00000419065.6	protein_coding	3258952,3263684,3264209,3267591	3259196,3263759,3264325,3267781	Gene ID= ENSG00000180822.11 TPM= 1.06 Transcript Type= protein_coding
chr6	3258894	3268049	3258894	3268049	+	ENST00000438998.6@PSMG4	ENST00000438998.6	protein_coding	3258894,3263684,3267591	3259196,3263759,3268049	Gene ID= ENSG00000180822.11 TPM= 8.5 Transcript Type= protein_coding
chr6	3260293	3264357	3260293	3264357	-	transcript145.chr6.nnic@NA	transcript145.chr6.nnic	NA	3260293	3264357	Gene ID= novel_gene_chr6_146 TPM= 28.68 Transcript Type= NA
chr6	3270099	3272115	3270099	3272115	-	transcript147.chr6.nnic@NA	transcript147.chr6.nnic	NA	3270099	3272115	Gene ID= novel_gene_chr6_148 TPM= 2.12 Transcript Type= NA
chr6	3722620	3751984	3722620	3751984	-	transcript151.chr6.nnic@PXDC1	transcript151.chr6.nnic	protein_coding	3751276,3739058,3738057,3737079,3727551,3722620	3751984,3739161,3738148,3737196,3727662,3723736	Gene ID= ENSG00000168994.13 TPM= 12.21 Transcript Type= NA
chr6	3722620	3752026	3722620	3752026	-	ENST00000380283.4@PXDC1	ENST00000380283.4	protein_coding	3751276,3738057,3737079,3727551,3722620	3752026,3738148,3737196,3727662,3723736	Gene ID= ENSG00000168994.13 TPM= 75.94 Transcript Type= protein_coding
chr6	3722618	3727110	3722618	3727110	-	transcript156.chr6.nnic@NA	transcript156.chr6.nnic	NA	3722618	3727110	Gene ID= novel_gene_chr6_157 TPM= 8.5 Transcript Type= NA
chr6	3849386	3851317	3849386	3851317	+	ENST00000380274.1@FAM50B	ENST00000380274.1	protein_coding	3849386	3851317	Gene ID= ENSG00000145945.5 TPM= 16.99 Transcript Type= protein_coding
chr6	3849388	3851317	3849388	3851317	+	ENST00000380272.3@FAM50B	ENST00000380272.3	protein_coding	3849388,3849789	3849486,3851317	Gene ID= ENSG00000145945.5 TPM= 28.68 Transcript Type= protein_coding
chr6	4021326	4064983	4021326	4064983	+	transcript163.chr6.nic@PRPF4B	transcript163.chr6.nic	protein_coding	4021326,4031559,4037397,4040772,4042487,4043813,4047175,4049016,4049732,4051957,4052720,4056321,4057036,4058728,4060413,4061015,4061655,4062213,4062557,4063074,4064801	4021466,4032755,4037570,4040927,4042568,4044023,4047248,4049106,4049879,4052094,4052873,4056435,4057187,4058814,4060686,4061147,4061700,4062299,4062633,4063119,4064983	Gene ID= ENSG00000112739.16 TPM= 7.44 Transcript Type= NA
chr6	4021267	4064982	4021267	4064982	+	ENST00000480058.5@PRPF4B	ENST00000480058.5	protein_coding	4021267,4031559,4037397,4040772,4042487,4043813,4047175,4049016,4049732,4051957,4052720,4056321,4057036,4058728,4060413,4063074	4021466,4032755,4037570,4040927,4042568,4044023,4047248,4049106,4049879,4052094,4052873,4056435,4057187,4058814,4062299,4064982	Gene ID= ENSG00000112739.16 TPM= 14.87 Transcript Type= nonsense_mediated_decay
chr6	4021326	4061907	4021326	4061907	+	ENST00000337659.10@PRPF4B	ENST00000337659.10	protein_coding	4021326,4031559,4037397,4040772,4042487,4043813,4047175,4049016,4049732,4051957,4052720,4056321,4057036,4058728,4060413	4021466,4032755,4037570,4040927,4042568,4044023,4047248,4049106,4049879,4052094,4052873,4056435,4057187,4058814,4061907	Gene ID= ENSG00000112739.16 TPM= 16.99 Transcript Type= protein_coding
chr6	4115706	4135608	4115706	4135608	-	transcript175.chr6.nnic@ECI2	transcript175.chr6.nnic	protein_coding	4135511,4133549,4130767,4130372,4127762,4126135,4125250,4117308,4115706	4135608,4133711,4130865,4130560,4127831,4126237,4125370,4117451,4116029	Gene ID= ENSG00000198721.12 TPM= 6.11 Transcript Type= NA
chr6	4115689	4135597	4115689	4135597	-	ENST00000380118.7@ECI2	ENST00000380118.7	protein_coding	4135511,4133549,4130767,4130372,4127762,4126135,4125250,4119186,4117308,4115689	4135597,4133711,4130865,4130560,4127831,4126237,4125370,4119275,4117451,4116029	Gene ID= ENSG00000198721.12 TPM= 111.79 Transcript Type= protein_coding
chr6	4115706	4135597	4115706	4135597	-	ENST00000361538.6@ECI2	ENST00000361538.6	protein_coding	4135511,4133549,4130767,4130372,4127762,4126135,4125250,4119186,4117308,4115706	4135597,4133701,4130865,4130560,4127831,4126237,4125370,4119275,4117451,4116029	Gene ID= ENSG00000198721.12 TPM= 49.12 Transcript Type= protein_coding
chr6	4341754	4347162	4341754	4347162	-	transcript178.chr6.nnic@AL159166.1	transcript178.chr6.nnic	lincRNA	4346633,4345723,4341754	4347162,4345806,4344849	Gene ID= ENSG00000231811.2 TPM= 14.34 Transcript Type= NA
chr6	4776435	4954256	4776435	4954256	+	ENST00000397588.7@CDYL	ENST00000397588.7	protein_coding	4776435,4891713,4935515,4937565,4943546,4952266,4953898	4776807,4892379,4935771,4937737,4943756,4952409,4954256	Gene ID= ENSG00000153046.17 TPM= 10.62 Transcript Type= protein_coding
chr6	4994732	5004047	4994732	5004047	-	ENST00000380051.6@RPP40	ENST00000380051.6	protein_coding	5003880,5002101,5000563,4999809,4998716,4996222,4995951,4994732	5004047,5002245,5000631,4999904,4998841,4996420,4996085,4995276	Gene ID= ENSG00000124787.13 TPM= 1.06 Transcript Type= protein_coding
chr6	5084581	5089487	5084581	5089487	+	ENST00000405617.3@PPP1R3G	ENST00000405617.3	protein_coding	5084581	5089487	Gene ID= ENSG00000219607.3 TPM= 6.37 Transcript Type= protein_coding
chr6	5186600	5260737	5186600	5260737	-	ENST00000500576.4@LYRM4	ENST00000500576.4	protein_coding	5260648,5216618,5186600	5260737,5216738,5186980	Gene ID= ENSG00000214113.10 TPM= 2.12 Transcript Type= protein_coding
chr6	5261526	5771580	5261526	5771580	+	ENST00000274680.8@FARS2	ENST00000274680.8	protein_coding	5261526,5368550,5404542,5431041,5545180,5613169,5771291	5261660,5369182,5404701,5431172,5545340,5613320,5771580	Gene ID= ENSG00000145982.11 TPM= 33.99 Transcript Type= protein_coding
chr6	5998002	6007605	5998002	6007605	-	ENST00000616243.1@NRN1	ENST00000616243.1	protein_coding	6007487,6006695,6002353,5998002	6007605,6006783,6002497,5999204	Gene ID= ENSG00000124785.8 TPM= 2.12 Transcript Type= protein_coding
chr6	5997999	6006967	5997999	6006967	-	ENST00000244766.6@NRN1	ENST00000244766.6	protein_coding	6006695,6002353,5997999	6006967,6002497,5999204	Gene ID= ENSG00000124785.8 TPM= 7.44 Transcript Type= protein_coding
chr6	5998002	6004044	5998002	6004044	-	ENST00000622188.4@NRN1	ENST00000622188.4	protein_coding	6003703,6003169,6002353,5998002	6004044,6003273,6002497,5999204	Gene ID= ENSG00000124785.8 TPM= 2.12 Transcript Type= protein_coding
chr6	6144085	6320834	6144085	6320834	-	ENST00000264870.7@F13A1	ENST00000264870.7	protein_coding	6320587,6318535,6305351,6266558,6250811,6248312,6224686,6222033,6197223,6195797,6181988,6174580,6167458,6151813,6144085	6320834,6318682,6305539,6266809,6250929,6248419,6224860,6222171,6197326,6195885,6182141,6174867,6167618,6151949,6145772	Gene ID= ENSG00000124491.15 TPM= 22.31 Transcript Type= protein_coding
chr6	6694792	6696044	6694792	6696044	-	transcript218.chr6.nnic@NA	transcript218.chr6.nnic	NA	6694792	6696044	Gene ID= novel_gene_chr6_219 TPM= 2.12 Transcript Type= NA
chr6	7107808	7251980	7107808	7251980	+	ENST00000379938.6@RREB1	ENST00000379938.6	protein_coding	7107808,7176655,7181124,7181870,7187434,7189159,7210804,7211573,7226467,7228997,7240438,7246424,7248511	7108060,7176773,7181246,7182082,7187523,7189322,7210948,7211709,7226656,7231907,7240602,7247221,7251980	Gene ID= ENSG00000124782.19 TPM= 11.15 Transcript Type= protein_coding
chr6	7230897	7251980	7230897	7251980	+	transcript224.chr6.nic@RREB1	transcript224.chr6.nic	protein_coding	7230897,7246424,7248511	7231907,7247221,7251980	Gene ID= ENSG00000124782.19 TPM= 16.46 Transcript Type= NA
chr6	7240987	7243903	7240987	7243903	+	transcript225.chr6.nnic@NA	transcript225.chr6.nnic	NA	7240987	7243903	Gene ID= novel_gene_chr6_226 TPM= 3.19 Transcript Type= NA
chr6	7268306	7313220	7268306	7313220	-	transcript227.chr6.nnic@SSR1	transcript227.chr6.nnic	protein_coding	7313042,7309917,7303550,7301310,7298747,7297923,7295392,7295088,7289683,7268306	7313220,7310029,7303637,7301572,7298823,7298001,7295485,7295102,7289931,7269154	Gene ID= ENSG00000124783.12 TPM= 2.12 Transcript Type= NA
chr6	7268306	7313207	7268306	7313207	-	ENST00000474597.5@SSR1	ENST00000474597.5	protein_coding	7313042,7309917,7303550,7301310,7298747,7297923,7295392,7295088,7289868,7268306	7313207,7310029,7303637,7301572,7298823,7298001,7295485,7295102,7289931,7269154	Gene ID= ENSG00000124783.12 TPM= 10.62 Transcript Type= protein_coding
chr6	7281143	7313207	7281143	7313207	-	ENST00000244763.8@SSR1	ENST00000244763.8	protein_coding	7313042,7309917,7303550,7301310,7298747,7297923,7295392,7281143	7313207,7310029,7303637,7301572,7298823,7298001,7295485,7289931	Gene ID= ENSG00000124783.12 TPM= 58.42 Transcript Type= protein_coding
chr6	7287570	7313198	7287570	7313198	-	ENST00000397511.6@SSR1	ENST00000397511.6	protein_coding	7313042,7309917,7303550,7301310,7298747,7297923,7295392,7295088,7287570	7313198,7310029,7303637,7301572,7298823,7298001,7295485,7295102,7289931	Gene ID= ENSG00000124783.12 TPM= 38.24 Transcript Type= protein_coding
chr6	7289676	7313182	7289676	7313182	-	ENST00000479365.5@SSR1	ENST00000479365.5	protein_coding	7313042,7309917,7303550,7301310,7298747,7297923,7295385,7289676	7313182,7310029,7303637,7301572,7298823,7298001,7295485,7289931	Gene ID= ENSG00000124783.12 TPM= 3.19 Transcript Type= protein_coding
chr6	7389475	7414390	7389475	7414390	+	transcript248.chr6.nic@RIOK1	transcript248.chr6.nic	protein_coding	7389475,7393099,7395053,7396703,7398698,7400958,7402603,7402817,7403941,7404418,7404918,7405249,7410386,7411332,7412889,7414238	7390073,7393303,7395143,7396772,7398740,7401050,7402715,7402897,7404027,7404555,7405021,7405355,7410451,7411451,7412942,7414390	Gene ID= ENSG00000124784.8 TPM= 10.62 Transcript Type= NA
chr6	7540454	7541424	7540454	7541424	-	transcript269.chr6.nnic@AL031058.1	transcript269.chr6.nnic	antisense_RNA	7541180,7540454	7541424,7541053	Gene ID= ENSG00000261189.1 TPM= 3.19 Transcript Type= NA
chr6	7540458	7543040	7540458	7543040	-	transcript270.chr6.nnic@AL031058.1	transcript270.chr6.nnic	antisense_RNA	7542771,7540458	7543040,7541053	Gene ID= ENSG00000261189.1 TPM= 4.25 Transcript Type= NA
chr6	7540451	7541338	7540451	7541338	-	ENST00000561592.1@AL031058.1	ENST00000561592.1	antisense_RNA	7540451	7541338	Gene ID= ENSG00000261189.1 TPM= 3.19 Transcript Type= antisense_RNA
chr6	7541369	7579555	7541369	7579555	+	transcript260.chr6.nic@DSP	transcript260.chr6.nic	protein_coding	7541369,7555718,7558116,7559226,7562652,7563736,7565359,7566377,7567354,7567781,7568437,7569186,7570437,7571383,7571842,7574086,7574657,7575295,7576294,7576959,7577779,7578464,7579275	7542085,7555820,7558264,7559400,7562780,7563786,7565520,7566481,7567449,7567906,7568589,7569340,7570563,7571584,7572068,7574252,7574795,7575488,7576456,7577042,7577886,7578562,7579555	Gene ID= ENSG00000096696.13 TPM= 34.44 Transcript Type= NA
chr6	7541575	7586717	7541575	7586717	+	ENST00000379802.7@DSP	ENST00000379802.7	protein_coding	7541575,7555718,7558116,7559226,7562652,7563736,7565359,7566377,7567354,7567781,7568437,7569186,7570437,7571383,7571842,7574086,7574657,7575295,7576294,7576959,7577779,7578464,7579275,7582642	7542085,7555820,7558264,7559400,7562780,7563786,7565520,7566481,7567449,7567906,7568589,7569340,7570563,7571584,7572068,7574252,7574795,7575488,7576456,7577042,7577886,7578562,7581569,7586717	Gene ID= ENSG00000096696.13 TPM= 43.2 Transcript Type= protein_coding
chr6	7541617	7586572	7541617	7586572	+	ENST00000418664.2@DSP	ENST00000418664.2	protein_coding	7541617,7555718,7558116,7559226,7562652,7563736,7565359,7566377,7567354,7567781,7568437,7569186,7570437,7571383,7571842,7574086,7574657,7575295,7576294,7576959,7577779,7578464,7579275,7582642	7542085,7555820,7558264,7559400,7562780,7563786,7565520,7566481,7567449,7567906,7568589,7569340,7570563,7571584,7572068,7574252,7574795,7575488,7576456,7577042,7577886,7578562,7579772,7586572	Gene ID= ENSG00000096696.13 TPM= 101.62 Transcript Type= protein_coding
chr6	7590199	7611967	7590199	7611967	+	ENST00000342415.5@SNRNP48	ENST00000342415.5	protein_coding	7590199,7593734,7594099,7595027,7601336,7602623,7605398,7606031,7608825	7590413,7593847,7594159,7595101,7601524,7602744,7605486,7606195,7611967	Gene ID= ENSG00000168566.12 TPM= 1.06 Transcript Type= protein_coding
chr6	7881517	7910814	7881517	7910814	-	ENST00000379757.8@TXNDC5	ENST00000379757.8	protein_coding	7910514,7904574,7899576,7895106,7891621,7889495,7888705,7885961,7884359,7881517	7910814,7904723,7899681,7895202,7891736,7889581,7888848,7886043,7884488,7883266	Gene ID= ENSG00000239264.8 TPM= 111.53 Transcript Type= protein_coding
chr6	8013567	8064414	8013567	8064414	-	ENST00000397457.6@BLOC1S5	ENST00000397457.6	protein_coding	8064265,8062534,8041139,8026367,8013567	8064414,8062616,8041268,8026425,8015828	Gene ID= ENSG00000188428.19 TPM= 2.12 Transcript Type= protein_coding
chr6	8013978	8064393	8013978	8064393	-	ENST00000244777.6@BLOC1S5	ENST00000244777.6	protein_coding	8064265,8062534,8041139,8027207,8026367,8013978	8064393,8062616,8041268,8027399,8026425,8015828	Gene ID= ENSG00000188428.19 TPM= 1.06 Transcript Type= nonsense_mediated_decay
chr6	8079395	8102578	8079395	8102578	-	ENST00000379715.9@EEF1E1	ENST00000379715.9	protein_coding	8102435,8097267,8090186,8079395	8102578,8097467,8090281,8080030	Gene ID= ENSG00000124802.11 TPM= 7.44 Transcript Type= protein_coding
chr6	8089954	8102559	8089954	8102559	-	ENST00000507463.1@EEF1E1	ENST00000507463.1	protein_coding	8102435,8097267,8089954	8102559,8097467,8090281	Gene ID= ENSG00000124802.11 TPM= 2.12 Transcript Type= protein_coding
chr6	8413068	8435541	8413068	8435541	-	transcript300.chr6.nnic@SLC35B3	transcript300.chr6.nnic	protein_coding	8435343,8434385,8429864,8427937,8422470,8420721,8419580,8417402,8416884,8414908,8413068	8435541,8434430,8430157,8428058,8422624,8420828,8419677,8417494,8416995,8414977,8413699	Gene ID= ENSG00000124786.9 TPM= 2.12 Transcript Type= NA
chr6	10556007	10629368	10556007	10629368	+	ENST00000316170.7@GCNT2	ENST00000316170.7	protein_coding	10556007,10621351,10626417	10557342,10621443,10629368	Gene ID= ENSG00000111846.16 TPM= 5.31 Transcript Type= protein_coding
chr6	10585746	10629368	10585746	10629368	+	ENST00000265012.4@GCNT2	ENST00000265012.4	protein_coding	10585746,10621351,10626417	10586914,10621443,10629368	Gene ID= ENSG00000111846.16 TPM= 13.81 Transcript Type= protein_coding
chr6	10534143	10535393	10534143	10535393	-	transcript319.chr6.nnic@NA	transcript319.chr6.nnic	NA	10534143	10535393	Gene ID= novel_gene_chr6_320 TPM= 6.37 Transcript Type= NA
chr6	10539182	10541126	10539182	10541126	-	transcript321.chr6.nnic@NA	transcript321.chr6.nnic	NA	10539182	10541126	Gene ID= novel_gene_chr6_322 TPM= 4.25 Transcript Type= NA
chr6	10694695	10709782	10694695	10709782	+	ENST00000379568.3@PAK1IP1	ENST00000379568.3	protein_coding	10694695,10697324,10702369,10702565,10703405,10704507,10704747,10707415,10708953,10709238	10695069,10697486,10702489,10702639,10703457,10704652,10704844,10707514,10709076,10709782	Gene ID= ENSG00000111845.4 TPM= 20.18 Transcript Type= protein_coding
chr6	10723125	10731129	10723125	10731129	+	ENST00000467415.5@TMEM14C	ENST00000467415.5	protein_coding	10723125,10724961,10725907,10728640,10730615	10723241,10725037,10726008,10728727,10731129	Gene ID= ENSG00000111843.13 TPM= 4.6 Transcript Type= processed_transcript
chr6	10723091	10731129	10723091	10731129	+	transcript333.chr6.nnic@TMEM14C	transcript333.chr6.nnic	protein_coding	10723091,10728640,10730615	10723241,10728727,10731129	Gene ID= ENSG00000111843.13 TPM= 3.54 Transcript Type= NA
chr6	10722915	10731119	10722915	10731119	+	ENST00000541412.5@TMEM14C	ENST00000541412.5	protein_coding	10722915,10724556,10724961,10725907,10728640,10730615	10723241,10724633,10725037,10726008,10728727,10731119	Gene ID= ENSG00000111843.13 TPM= 3.19 Transcript Type= protein_coding
chr6	10722975	10731129	10722975	10731129	+	ENST00000229563.5@TMEM14C	ENST00000229563.5	protein_coding	10722975,10724570,10724961,10725907,10728640,10730615	10723241,10724633,10725037,10726008,10728727,10731129	Gene ID= ENSG00000111843.13 TPM= 76.83 Transcript Type= protein_coding
chr6	10747759	10756981	10747759	10756981	+	ENST00000379542.9@TMEM14B	ENST00000379542.9	protein_coding	10747759,10749202,10749622,10751133,10755142,10756467	10747881,10749268,10749698,10751234,10755232,10756981	Gene ID= ENSG00000137210.13 TPM= 151.89 Transcript Type= protein_coding
chr6	10747811	10756947	10747811	10756947	+	ENST00000379530.7@TMEM14B	ENST00000379530.7	protein_coding	10747811,10749202,10749622,10755142,10756467	10747881,10749268,10749698,10755232,10756947	Gene ID= ENSG00000137210.13 TPM= 6.37 Transcript Type= protein_coding
chr6	10747811	10829165	10747811	10829165	+	ENST00000463100.5@TMEM14B	ENST00000463100.5	protein_coding	10747811,10749202,10749622,10770077,10829007	10747881,10749268,10749698,10770204,10829165	Gene ID= ENSG00000137210.13 TPM= 1.06 Transcript Type= nonsense_mediated_decay
chr6	10747817	10756973	10747817	10756973	+	ENST00000473276.5@TMEM14B	ENST00000473276.5	protein_coding	10747817,10749202,10755142,10756467	10747881,10749268,10755232,10756973	Gene ID= ENSG00000137210.13 TPM= 3.19 Transcript Type= protein_coding
chr6	11183298	11232682	11183298	11232682	-	ENST00000379446.9@NEDD9	ENST00000379446.9	protein_coding	11232504,11213281,11193591,11192345,11189964,11188218,11183298	11232682,11213727,11193692,11192446,11191205,11188307,11185671	Gene ID= ENSG00000111859.16 TPM= 15.93 Transcript Type= protein_coding
chr6	11201177	11204735	11201177	11204735	+	transcript347.chr6.nnic@NA	transcript347.chr6.nnic	NA	11201177	11204735	Gene ID= novel_gene_chr6_348 TPM= 5.31 Transcript Type= NA
chr6	11218878	11223494	11218878	11223494	+	transcript349.chr6.nnic@NA	transcript349.chr6.nnic	NA	11218878	11223494	Gene ID= novel_gene_chr6_350 TPM= 2.12 Transcript Type= NA
chr6	12290363	12297194	12290363	12297194	+	ENST00000379375.5@EDN1	ENST00000379375.5	protein_coding	12290363,12292341,12293941,12294261,12295962	12290693,12292509,12294096,12294404,12297194	Gene ID= ENSG00000078401.6 TPM= 4.25 Transcript Type= protein_coding
chr6	12514110	12514724	12514110	12514724	+	ENST00000391491.2@RPL15P3	ENST00000391491.2	processed_pseudogene	12514110	12514724	Gene ID= ENSG00000212802.4 TPM= 30.8 Transcript Type= processed_pseudogene
chr6	12965453	12968530	12965453	12968530	-	transcript386.chr6.nnic@NA	transcript386.chr6.nnic	NA	12965453	12968530	Gene ID= novel_gene_chr6_387 TPM= 6.37 Transcript Type= NA
chr6	13190200	13193168	13190200	13193168	-	transcript388.chr6.nnic@NA	transcript388.chr6.nnic	NA	13190200	13193168	Gene ID= novel_gene_chr6_389 TPM= 6.37 Transcript Type= NA
chr6	13304951	13328543	13304951	13328543	-	transcript371.chr6.nic@TBC1D7	transcript371.chr6.nic	protein_coding	13328316,13326787,13325094,13320908,13316571,13307600,13306398,13304951	13328543,13326906,13325174,13321095,13316708,13307745,13306527,13305187	Gene ID= ENSG00000145979.17 TPM= 14.02 Transcript Type= NA
chr6	13304951	13328555	13304951	13328555	-	transcript375.chr6.nic@TBC1D7	transcript375.chr6.nic	protein_coding	13328296,13326787,13320908,13316571,13307600,13306398,13304951	13328555,13326906,13321095,13316708,13307745,13306527,13305187	Gene ID= ENSG00000145979.17 TPM= 2.34 Transcript Type= NA
chr6	13304954	13328583	13304954	13328583	-	ENST00000379307.6@TBC1D7	ENST00000379307.6	protein_coding	13328456,13326787,13320908,13316571,13307600,13306398,13304954	13328583,13326906,13321095,13316708,13307745,13306527,13305187	Gene ID= ENSG00000145979.17 TPM= 2.12 Transcript Type= protein_coding
chr6	13318712	13328543	13318712	13328543	-	transcript381.chr6.nic@TBC1D7	transcript381.chr6.nic	protein_coding	13328316,13326787,13325094,13318712	13328543,13326906,13325174,13321095	Gene ID= ENSG00000145979.17 TPM= 2.12 Transcript Type= NA
chr6	13304951	13328531	13304951	13328531	-	ENST00000356436.8@TBC1D7	ENST00000356436.8	protein_coding	13328456,13326787,13325094,13320908,13316571,13307600,13306398,13304951	13328531,13326906,13325174,13321095,13316708,13307745,13306527,13305187	Gene ID= ENSG00000145979.17 TPM= 28.89 Transcript Type= protein_coding
chr6	13304951	13328531	13304951	13328531	-	ENST00000379300.7@TBC1D7	ENST00000379300.7	protein_coding	13328296,13326787,13325094,13320908,13316571,13307600,13306398,13304951	13328531,13326906,13325174,13321095,13316708,13307745,13306527,13305187	Gene ID= ENSG00000145979.17 TPM= 26.77 Transcript Type= protein_coding
chr6	13314336	13316560	13314336	13316560	+	transcript384.chr6.nnic@NA	transcript384.chr6.nnic	NA	13314336	13316560	Gene ID= novel_gene_chr6_385 TPM= 4.25 Transcript Type= NA
chr6	13363355	13486183	13363355	13486183	-	ENST00000612338.4@GFOD1	ENST00000612338.4	protein_coding	13486011,13363355	13486183,13365662	Gene ID= ENSG00000145990.10 TPM= 3.19 Transcript Type= protein_coding
chr6	13469268	13487662	13469268	13487662	-	ENST00000603223.1@GFOD1	ENST00000603223.1	protein_coding	13486638,13469268	13487662,13470630	Gene ID= ENSG00000145990.10 TPM= 9.56 Transcript Type= protein_coding
chr6	13469275	13486183	13469275	13486183	-	ENST00000379278.3@GFOD1	ENST00000379278.3	protein_coding	13486011,13469275	13486183,13470630	Gene ID= ENSG00000145990.10 TPM= 3.19 Transcript Type= processed_transcript
chr6	13358137	13360466	13358137	13360466	-	transcript402.chr6.nnic@NA	transcript402.chr6.nnic	NA	13358137	13360466	Gene ID= novel_gene_chr6_403 TPM= 11.68 Transcript Type= NA
chr6	13391372	13393353	13391372	13393353	+	transcript396.chr6.nnic@NA	transcript396.chr6.nnic	NA	13391372	13393353	Gene ID= novel_gene_chr6_397 TPM= 2.12 Transcript Type= NA
chr6	13445402	13447769	13445402	13447769	+	transcript398.chr6.nnic@NA	transcript398.chr6.nnic	NA	13445402	13447769	Gene ID= novel_gene_chr6_399 TPM= 23.37 Transcript Type= NA
chr6	13457632	13458784	13457632	13458784	+	transcript400.chr6.nnic@NA	transcript400.chr6.nnic	NA	13457632	13458784	Gene ID= novel_gene_chr6_401 TPM= 4.25 Transcript Type= NA
chr6	13574627	13612173	13574627	13612173	+	transcript408.chr6.nnic@SIRT5	transcript408.chr6.nnic	protein_coding	13574627,13578772,13579451,13584076,13588331,13591669,13595477,13596963,13599032,13600834,13611790	13574744,13578833,13579609,13584225,13588464,13591894,13595564,13597016,13599155,13600949,13612173	Gene ID= ENSG00000124523.15 TPM= 3.19 Transcript Type= NA
chr6	13574556	13614102	13574556	13614102	+	transcript418.chr6.nic@SIRT5	transcript418.chr6.nic	protein_coding	13574556,13579451,13584076,13588331,13591669,13595477,13596963,13599032,13600834,13611790	13574624,13579609,13584225,13588464,13591894,13595564,13597016,13599155,13600949,13614102	Gene ID= ENSG00000124523.15 TPM= 7.44 Transcript Type= NA
chr6	13574529	13615158	13574529	13615158	+	ENST00000397350.6@SIRT5	ENST00000397350.6	protein_coding	13574529,13579451,13584076,13591669,13595477,13596963,13599032,13600834,13611790	13574624,13579609,13584225,13591894,13595564,13597016,13599155,13600949,13615158	Gene ID= ENSG00000124523.15 TPM= 1.06 Transcript Type= protein_coding
chr6	13574601	13605739	13574601	13605739	+	ENST00000379262.8@SIRT5	ENST00000379262.8	protein_coding	13574601,13579451,13584076,13588331,13591669,13595477,13596963,13599032,13600834,13604476	13574624,13579609,13584225,13588464,13591894,13595564,13597016,13599155,13600949,13605739	Gene ID= ENSG00000124523.15 TPM= 1.06 Transcript Type= protein_coding
chr6	13615327	13621205	13615327	13621205	+	ENST00000451315.6@NOL7	ENST00000451315.6	protein_coding	13615327,13615712,13616463,13617770,13618058,13620208,13620408,13620754	13615624,13615772,13616521,13617801,13618139,13620329,13620485,13621205	Gene ID= ENSG00000225921.6 TPM= 24.43 Transcript Type= protein_coding
chr6	13621498	13710841	13621498	13710841	-	transcript436.chr6.nnic@RANBP9	transcript436.chr6.nnic	protein_coding	13710729,13696785,13658780,13657109,13652659,13644545,13642479,13641199,13639563,13637808,13634431,13632370,13625653,13621498	13710841,13696896,13658832,13657276,13652681,13644729,13642591,13641307,13639753,13637955,13634552,13632521,13625764,13622492	Gene ID= ENSG00000010017.12 TPM= 5.31 Transcript Type= NA
chr6	13695402	13711850	13695402	13711850	-	transcript452.chr6.nic@RANBP9	transcript452.chr6.nic	protein_coding	13710935,13695402	13711850,13696896	Gene ID= ENSG00000010017.12 TPM= 2.12 Transcript Type= NA
chr6	13621498	13711564	13621498	13711564	-	ENST00000011619.5@RANBP9	ENST00000011619.5	protein_coding	13710935,13696785,13658780,13657109,13652659,13644545,13642479,13641199,13639563,13637808,13634431,13632370,13625653,13621498	13711564,13696896,13658832,13657276,13652681,13644729,13642591,13641307,13639753,13637955,13634552,13632521,13625764,13622492	Gene ID= ENSG00000010017.12 TPM= 22.31 Transcript Type= protein_coding
chr6	13786557	13814568	13786557	13814568	-	ENST00000379170.8@MCUR1	ENST00000379170.8	protein_coding	13814015,13806925,13802243,13801288,13800341,13798833,13793894,13791878,13786557	13814568,13807044,13802346,13801389,13800382,13798904,13793947,13791992,13790864	Gene ID= ENSG00000050393.11 TPM= 1.06 Transcript Type= protein_coding
chr6	13790788	13814155	13790788	13814155	-	transcript456.chr6.nnic@MCUR1	transcript456.chr6.nnic	protein_coding	13814015,13806925,13802243,13801288,13800341,13798833,13793894,13791878,13790788	13814155,13807044,13802346,13801389,13800382,13798904,13794038,13791992,13790864	Gene ID= ENSG00000050393.11 TPM= 2.12 Transcript Type= NA
chr6	15243821	15245255	15243821	15245255	-	transcript467.chr6.nnic@NA	transcript467.chr6.nnic	NA	15243821	15245255	Gene ID= novel_gene_chr6_468 TPM= 2.12 Transcript Type= NA
chr6	15522801	15663042	15522801	15663042	-	ENST00000344537.9@DTNBP1	ENST00000344537.9	protein_coding	15662814,15652087,15651313,15637744,15627343,15615267,15593059,15533240,15524526,15522801	15663042,15652140,15651363,15637804,15627475,15615399,15593081,15533395,15524669,15523219	Gene ID= ENSG00000047579.19 TPM= 38.77 Transcript Type= protein_coding
chr6	15522810	15663058	15522810	15663058	-	ENST00000355917.7@DTNBP1	ENST00000355917.7	protein_coding	15662814,15652087,15637744,15627343,15615267,15593059,15533240,15524526,15522810	15663058,15652140,15637804,15627475,15615399,15593081,15533395,15524669,15523219	Gene ID= ENSG00000047579.19 TPM= 1.59 Transcript Type= protein_coding
chr6	15523563	15662975	15523563	15662975	-	ENST00000338950.9@DTNBP1	ENST00000338950.9	protein_coding	15662814,15652087,15651313,15637744,15627343,15615267,15593059,15533240,15523563	15662975,15652140,15651363,15637804,15627475,15615399,15593081,15533395,15524669	Gene ID= ENSG00000047579.19 TPM= 1.06 Transcript Type= protein_coding
chr6	16129125	16146881	16129125	16146881	+	ENST00000356840.7@MYLIP	ENST00000356840.7	protein_coding	16129125,16130557,16141625,16143020,16143699,16144897,16146662	16129409,16130747,16141810,16143217,16143863,16145317,16146881	Gene ID= ENSG00000007944.14 TPM= 13.81 Transcript Type= protein_coding
chr6	16238580	16295549	16238580	16295549	+	ENST00000259727.4@GMPR	ENST00000259727.4	protein_coding	16238580,16246842,16250284,16254562,16274415,16278784,16285793,16290462,16295006	16238780,16246961,16250367,16254735,16274496,16278890,16285835,16290621,16295549	Gene ID= ENSG00000137198.9 TPM= 120.56 Transcript Type= protein_coding
chr6	16744642	16747672	16744642	16747672	+	transcript488.chr6.nnic@NA	transcript488.chr6.nnic	NA	16744642	16747672	Gene ID= novel_gene_chr6_489 TPM= 2.12 Transcript Type= NA
chr6	17280884	17293871	17280884	17293871	+	transcript505.chr6.nnic@RBM24	transcript505.chr6.nnic	protein_coding	17280884,17282805,17284657,17291784	17281749,17282928,17284711,17293871	Gene ID= ENSG00000112183.14 TPM= 102.23 Transcript Type= NA
chr6	17281346	17293875	17281346	17293875	+	ENST00000379052.9@RBM24	ENST00000379052.9	protein_coding	17281346,17282805,17284657,17291756	17281749,17282928,17284711,17293875	Gene ID= ENSG00000112183.14 TPM= 165.25 Transcript Type= protein_coding
chr6	17282701	17293866	17282701	17293866	+	ENST00000318204.5@RBM24	ENST00000318204.5	protein_coding	17282701,17284657,17291756	17282928,17284711,17293866	Gene ID= ENSG00000112183.14 TPM= 87.71 Transcript Type= protein_coding
chr6	17285422	17289794	17285422	17289794	-	transcript512.chr6.nnic@NA	transcript512.chr6.nnic	NA	17285422	17289794	Gene ID= novel_gene_chr6_513 TPM= 7.44 Transcript Type= NA
chr6	17393216	17557792	17393216	17557792	+	ENST00000229922.6@CAP2	ENST00000229922.6	protein_coding	17393216,17421555,17426590,17462996,17507169,17507641,17513849,17539269,17540973,17542837,17543061,17551464,17556359	17393746,17421676,17426690,17463073,17507312,17507726,17513954,17539458,17541148,17542960,17543143,17551604,17557792	Gene ID= ENSG00000112186.11 TPM= 254.92 Transcript Type= protein_coding
chr6	17406400	17406901	17406400	17406901	-	transcript531.chr6.nnic@NA	transcript531.chr6.nnic	NA	17406400	17406901	Gene ID= novel_gene_chr6_532 TPM= 2.12 Transcript Type= NA
chr6	17600355	17611719	17600355	17611719	+	ENST00000259963.3@FAM8A1	ENST00000259963.3	protein_coding	17600355,17602590,17604906,17605874,17608195	17601121,17602710,17605029,17606013,17611719	Gene ID= ENSG00000137414.5 TPM= 13.81 Transcript Type= protein_coding
chr6	17656248	17657413	17656248	17657413	+	transcript548.chr6.nnic@NA	transcript548.chr6.nnic	NA	17656248	17657413	Gene ID= novel_gene_chr6_549 TPM= 2.12 Transcript Type= NA
chr6	17814926	17988155	17814926	17988155	-	transcript557.chr6.nnic@KIF13A	transcript557.chr6.nnic	protein_coding	17987409,17987054,17898168,17873377,17856030,17855437,17851955,17850323,17849377,17837472,17836878,17833961,17831101,17828240,17826038,17825768,17817020,17814926	17988155,17987144,17898180,17873437,17856122,17855617,17852042,17850457,17849489,17837583,17837090,17834071,17831235,17828370,17826124,17825934,17817233,17815637	Gene ID= ENSG00000137177.19 TPM= 12.75 Transcript Type= NA
chr6	17866917	17988061	17866917	17988061	-	transcript565.chr6.nnic@KIF13A	transcript565.chr6.nnic	protein_coding	17987409,17987054,17898168,17873377,17866917	17988061,17987144,17898180,17873437,17868251	Gene ID= ENSG00000137177.19 TPM= 2.12 Transcript Type= NA
chr6	17984586	17987612	17984586	17987612	-	transcript572.chr6.nic@KIF13A	transcript572.chr6.nic	protein_coding	17987409,17984586	17987612,17987144	Gene ID= ENSG00000137177.19 TPM= 3.19 Transcript Type= NA
chr6	17950406	17987623	17950406	17987623	-	ENST00000502704.2@KIF13A	ENST00000502704.2	protein_coding	17987409,17987054,17950406	17987623,17987144,17951429	Gene ID= ENSG00000137177.19 TPM= 13.81 Transcript Type= protein_coding
chr6	18120440	18122687	18120440	18122687	-	ENST00000340650.5@NHLRC1	ENST00000340650.5	protein_coding	18120440	18122687	Gene ID= ENSG00000187566.5 TPM= 3.19 Transcript Type= protein_coding
chr6	18128309	18155077	18128309	18155077	-	transcript575.chr6.nnic@TPMT	transcript575.chr6.nnic	protein_coding	18155033,18148988,18147823,18143596,18139665,18138963,18133804,18132133,18130252,18128309	18155077,18149171,18147915,18143728,18139717,18139037,18133889,18132177,18130780,18128794	Gene ID= ENSG00000137364.4 TPM= 2.12 Transcript Type= NA
chr6	18155413	18223853	18155413	18223853	+	transcript584.chr6.nic@KDM1B	transcript584.chr6.nic	protein_coding	18155413,18155883,18159883,18161327,18162835,18166267,18171363,18185772,18187792,18191197,18197057,18197587,18200439,18201486,18205537,18207398,18208132,18212488,18213656,18215007,18217733,18221909	18155571,18155926,18159982,18161454,18162924,18166378,18171479,18185810,18188002,18191381,18197233,18197661,18200576,18201657,18205664,18207529,18208206,18212604,18213781,18215129,18217885,18223853	Gene ID= ENSG00000165097.13 TPM= 11.68 Transcript Type= NA
chr6	18224184	18264254	18224184	18264254	-	transcript591.chr6.nnic@DEK	transcript591.chr6.nnic	protein_coding	18264098,18263843,18258304,18257953,18256361,18255731,18249651,18237381,18236452,18226174,18224184	18264254,18263996,18258405,18258062,18256455,18255851,18249839,18237516,18236600,18226242,18225730	Gene ID= ENSG00000124795.14 TPM= 3.19 Transcript Type= NA
chr6	18223868	18264823	18223868	18264823	-	ENST00000397239.7@DEK	ENST00000397239.7	protein_coding	18264385,18263843,18258304,18257953,18256361,18255731,18249651,18237381,18236452,18226174,18223868	18264823,18263996,18258405,18258062,18256455,18255851,18249839,18237516,18236600,18226242,18225730	Gene ID= ENSG00000124795.14 TPM= 37.18 Transcript Type= protein_coding
chr6	18224184	18264191	18224184	18264191	-	transcript595.chr6.nic@DEK	transcript595.chr6.nic	protein_coding	18263843,18258304,18257953,18256361,18255731,18249651,18237381,18236452,18226174,18224184	18264191,18258405,18258062,18256455,18255851,18249839,18237516,18236600,18226242,18225730	Gene ID= ENSG00000124795.14 TPM= 3.19 Transcript Type= NA
chr6	18387350	18468874	18387350	18468874	+	ENST00000259939.3@RNF144B	ENST00000259939.3	protein_coding	18387350,18399499,18427581,18439684,18457155,18459607,18463291,18464927	18387630,18399699,18427685,18439744,18457359,18459751,18463380,18468874	Gene ID= ENSG00000137393.9 TPM= 2.12 Transcript Type= protein_coding
chr6	19837370	19839819	19837370	19839819	+	transcript614.chr6.nic@ID4	transcript614.chr6.nic	protein_coding	19837370,19839210	19838642,19839819	Gene ID= ENSG00000172201.11 TPM= 2.12 Transcript Type= NA
chr6	19837386	19840684	19837386	19840684	+	ENST00000378700.7@ID4	ENST00000378700.7	protein_coding	19837386,19838584,19839210	19838195,19838642,19840684	Gene ID= ENSG00000172201.11 TPM= 16.99 Transcript Type= protein_coding
chr6	20403679	20493714	20403679	20493714	+	ENST00000535432.2@E2F3	ENST00000535432.2	protein_coding	20403679,20479846,20481224,20482762,20486689,20488113,20490168	20403832,20479957,20481425,20482920,20486803,20488248,20493714	Gene ID= ENSG00000112242.14 TPM= 5.31 Transcript Type= protein_coding
chr6	20403579	20431746	20403579	20431746	+	transcript621.chr6.nnic@E2F3	transcript621.chr6.nnic	protein_coding	20403579,20431104	20403832,20431746	Gene ID= ENSG00000112242.14 TPM= 2.12 Transcript Type= NA
chr6	20534457	21232404	20534457	21232404	+	ENST00000274695.8@CDKAL1	ENST00000274695.8	protein_coding	20534457,20535351,20546346,20548593,20649293,20739519,20758595,20781145,20846075,20955419,21000227,21065048,21108401,21198021,21201110,21230848	20534574,20535394,20546523,20548705,20649377,20739615,20758643,20781265,20846178,20955585,21000372,21065228,21108463,21198104,21201274,21232404	Gene ID= ENSG00000145996.11 TPM= 3.19 Transcript Type= protein_coding
chr6	21592768	21598619	21592768	21598619	+	ENST00000244745.3@SOX4	ENST00000244745.3	protein_coding	21592768	21598619	Gene ID= ENSG00000124766.6 TPM= 13.81 Transcript Type= protein_coding
chr6	24402908	24426194	24402908	24426194	+	ENST00000274747.11@MRS2	ENST00000274747.11	protein_coding	24402908,24405168,24412222,24415033,24416397,24418084,24418461,24422937,24423584	24403236,24405241,24412395,24415163,24416513,24418236,24418578,24423050,24426194	Gene ID= ENSG00000124532.14 TPM= 2.12 Transcript Type= protein_coding
chr6	24402954	24423476	24402954	24423476	+	ENST00000378353.5@MRS2	ENST00000378353.5	protein_coding	24402954,24405168,24408408,24409461,24412222,24415033,24416397,24418084,24418461,24422937	24403236,24405241,24408444,24409573,24412395,24415163,24416513,24418236,24418578,24423476	Gene ID= ENSG00000124532.14 TPM= 31.86 Transcript Type= protein_coding
chr6	24402954	24425582	24402954	24425582	+	ENST00000378386.7@MRS2	ENST00000378386.7	protein_coding	24402954,24405168,24408408,24409461,24412222,24415033,24416397,24418084,24418461,24422937,24423584	24403236,24405241,24408444,24409573,24412395,24415163,24416513,24418236,24418578,24423050,24425582	Gene ID= ENSG00000124532.14 TPM= 9.56 Transcript Type= protein_coding
chr6	24494798	24537205	24494798	24537205	+	transcript647.chr6.nnic@ALDH5A1	transcript647.chr6.nnic	protein_coding	24494798,24502523,24503263,24504869,24515167,24520401,24522767,24527997,24532119,24533507,24536510	24495350,24502606,24503433,24504985,24515310,24520544,24522925,24528166,24532177,24533687,24537205	Gene ID= ENSG00000112294.12 TPM= 2.12 Transcript Type= NA
chr6	24494852	24537207	24494852	24537207	+	ENST00000357578.7@ALDH5A1	ENST00000357578.7	protein_coding	24494852,24502523,24503263,24504869,24515167,24520401,24522767,24527997,24532119,24533507	24495350,24502606,24503433,24504985,24515310,24520544,24522925,24528166,24532177,24537207	Gene ID= ENSG00000112294.12 TPM= 15.93 Transcript Type= protein_coding
chr6	24649977	24667033	24649977	24667033	-	ENST00000378198.8@TDP2	ENST00000378198.8	protein_coding	24666698,24666526,24658561,24657812,24654412,24652983,24649977	24667033,24666611,24658734,24657903,24654530,24653153,24651069	Gene ID= ENSG00000111802.13 TPM= 35.05 Transcript Type= protein_coding
chr6	24661376	24664344	24661376	24664344	+	transcript665.chr6.nnic@NA	transcript665.chr6.nnic	NA	24661376	24664344	Gene ID= novel_gene_chr6_666 TPM= 6.37 Transcript Type= NA
chr6	24667071	24705046	24667071	24705046	+	ENST00000230048.4@ACOT13	ENST00000230048.4	protein_coding	24667071,24697883,24701459	24667344,24698067,24705046	Gene ID= ENSG00000112304.10 TPM= 2.12 Transcript Type= protein_coding
chr6	24704861	24720836	24704861	24720836	-	ENST00000378119.8@C6orf62	ENST00000378119.8	protein_coding	24718540,24716148,24714318,24708777,24704861	24720836,24716324,24714440,24708911,24706262	Gene ID= ENSG00000112308.12 TPM= 90.28 Transcript Type= protein_coding
chr6	24774938	24786099	24774938	24786099	+	ENST00000230056.7@GMNN	ENST00000230056.7	protein_coding	24774938,24777222,24780663,24781477,24784087,24784444,24785638	24775244,24777297,24780740,24781621,24784169,24784554,24786099	Gene ID= ENSG00000112312.9 TPM= 3.19 Transcript Type= protein_coding
chr6	24804285	24911103	24804285	24911103	-	transcript669.chr6.nic@RIPOR2	transcript669.chr6.nic	protein_coding	24910818,24875691,24873644,24872881,24870866,24869094,24865301,24860973,24852575,24850597,24849802,24848025,24842862,24839091,24835703,24832256,24830509,24828137,24825226,24818542,24809717,24804285	24911103,24875817,24873799,24872959,24870889,24869147,24865450,24861036,24852618,24850722,24849950,24848154,24843554,24839272,24835871,24832391,24830670,24828295,24825428,24818625,24809807,24806473	Gene ID= ENSG00000111913.17 TPM= 3.19 Transcript Type= NA
chr6	24804282	24936052	24804282	24936052	-	ENST00000538035.5@RIPOR2	ENST00000538035.5	protein_coding	24935838,24875691,24873644,24872881,24870866,24869094,24865301,24860973,24852575,24850597,24849802,24848025,24842862,24839091,24835703,24832256,24830509,24828137,24825226,24818542,24809717,24804282	24936052,24875817,24873799,24872959,24870889,24869147,24865450,24861036,24852618,24850722,24849950,24848154,24843554,24839272,24835871,24832391,24830670,24828295,24825428,24818625,24809807,24806473	Gene ID= ENSG00000111913.17 TPM= 1.06 Transcript Type= protein_coding
chr6	24839937	24935970	24839937	24935970	-	transcript672.chr6.nic@RIPOR2	transcript672.chr6.nic	protein_coding	24935838,24875691,24873644,24872881,24870866,24869094,24865301,24860973,24852575,24850597,24849802,24848025,24842862,24839937	24935970,24875817,24873799,24872959,24870889,24869147,24865450,24861036,24852618,24850722,24849950,24848154,24843554,24840775	Gene ID= ENSG00000111913.17 TPM= 2.12 Transcript Type= NA
chr6	25084552	25094518	25084552	25094518	-	transcript678.chr6.nnic@CMAHP	transcript678.chr6.nnic	transcribed_unitary_pseudogene	25093514,25091896,25084552	25094518,25092014,25086899	Gene ID= ENSG00000168405.16 TPM= 4.25 Transcript Type= NA
chr6	25358334	25361979	25358334	25361979	+	transcript682.chr6.nnic@NA	transcript682.chr6.nnic	NA	25358334	25361979	Gene ID= novel_gene_chr6_683 TPM= 2.12 Transcript Type= NA
chr6	25962802	25991226	25962802	25991226	+	ENST00000357085.4@TRIM38	ENST00000357085.4	protein_coding	25962802,25963049,25966335,25969325,25971869,25973054,25973173,25983164	25962855,25963282,25966933,25969420,25972099,25973076,25973285,25991226	Gene ID= ENSG00000112343.10 TPM= 1.06 Transcript Type= protein_coding
chr6	25992662	26001775	25992662	26001775	+	ENST00000606723.2@U91328.2	ENST00000606723.2	lincRNA	25992662,25997903	25992918,26001775	Gene ID= ENSG00000272462.2 TPM= 9.56 Transcript Type= lincRNA
chr6	26055705	26056510	26055705	26056510	-	transcript690.chr6.nnic@NA	transcript690.chr6.nnic	NA	26055705	26056510	Gene ID= novel_gene_chr6_691 TPM= 47.8 Transcript Type= NA
chr6	26103876	26104310	26103876	26104310	+	ENST00000377803.3@HIST1H4C	ENST00000377803.3	protein_coding	26103876	26104310	Gene ID= ENSG00000197061.4 TPM= 7.44 Transcript Type= protein_coding
chr6	26114873	26123910	26114873	26123910	-	ENST00000314332.5@HIST1H2BC	ENST00000314332.5	protein_coding	26123515,26114873	26123910,26115135	Gene ID= ENSG00000180596.7 TPM= 1.06 Transcript Type= protein_coding
chr6	26124172	26138957	26124172	26138957	+	transcript697.chr6.nnic@HIST1H2AC	transcript697.chr6.nnic	protein_coding	26124172,26127698,26138054	26124633,26127761,26138957	Gene ID= ENSG00000180573.9 TPM= 4.25 Transcript Type= NA
chr6	26124172	26139109	26124172	26139109	+	transcript700.chr6.nnic@HIST1H2AC	transcript700.chr6.nnic	protein_coding	26124172,26127698,26138054	26124749,26127761,26139109	Gene ID= ENSG00000180573.9 TPM= 17.53 Transcript Type= NA
chr6	26124203	26139084	26124203	26139084	+	ENST00000602637.1@HIST1H2AC	ENST00000602637.1	protein_coding	26124203,26138054	26124633,26139084	Gene ID= ENSG00000180573.9 TPM= 3.19 Transcript Type= protein_coding
chr6	26124145	26139102	26124145	26139102	+	ENST00000377791.3@HIST1H2AC	ENST00000377791.3	protein_coding	26124145,26138054	26124749,26139102	Gene ID= ENSG00000180573.9 TPM= 14.34 Transcript Type= protein_coding
chr6	26158146	26171349	26158146	26171349	+	ENST00000289316.2@HIST1H2BD	ENST00000289316.2	protein_coding	26158146,26170975	26158559,26171349	Gene ID= ENSG00000158373.8 TPM= 3.19 Transcript Type= protein_coding
chr6	26214091	26215417	26214091	26215417	-	transcript710.chr6.nnic@NA	transcript710.chr6.nnic	NA	26214091	26215417	Gene ID= novel_gene_chr6_711 TPM= 3.19 Transcript Type= NA
chr6	26216975	26217483	26216975	26217483	+	ENST00000303910.4@HIST1H2AE	ENST00000303910.4	protein_coding	26216975	26217483	Gene ID= ENSG00000277075.2 TPM= 1.06 Transcript Type= protein_coding
chr6	26224221	26227469	26224221	26227469	+	transcript713.chr6.nnic@HIST1H3E	transcript713.chr6.nnic	protein_coding	26224221,26224902,26227312	26224305,26227168,26227469	Gene ID= ENSG00000274750.2 TPM= 2.12 Transcript Type= NA
chr6	26224199	26227473	26224199	26227473	+	ENST00000634733.1@HIST1H3E	ENST00000634733.1	protein_coding	26224199,26224902	26224305,26227473	Gene ID= ENSG00000274750.2 TPM= 3.19 Transcript Type= protein_coding
chr6	26277609	26285638	26277609	26285638	-	ENST00000634956.1@HIST1H4H	ENST00000634956.1	protein_coding	26285034,26280899,26277609	26285638,26281587,26278477	Gene ID= ENSG00000158406.4 TPM= 7.44 Transcript Type= nonsense_mediated_decay
chr6	26322419	26322638	26322419	26322638	-	transcript717.chr6.nnic@NA	transcript717.chr6.nnic	NA	26322419	26322638	Gene ID= novel_gene_chr6_718 TPM= 2.12 Transcript Type= NA
chr6	26365159	26378320	26365159	26378320	+	ENST00000508906.6@BTN3A2	ENST00000508906.6	protein_coding	26365159,26367990,26368565,26370322,26372897,26373276,26373387,26374327,26374771,26375797	26365352,26368050,26368912,26370603,26373097,26373296,26373413,26374373,26374798,26378320	Gene ID= ENSG00000186470.13 TPM= 2.66 Transcript Type= protein_coding
chr6	26365231	26378318	26365231	26378318	+	ENST00000356386.6@BTN3A2	ENST00000356386.6	protein_coding	26365231,26367990,26368178,26368565,26370322,26372897,26373276,26373387,26374327,26374771,26376529	26365352,26368050,26368267,26368912,26370603,26373097,26373296,26373413,26374373,26374798,26378318	Gene ID= ENSG00000186470.13 TPM= 2.66 Transcript Type= protein_coding
chr6	26365264	26376236	26365264	26376236	+	ENST00000377708.6@BTN3A2	ENST00000377708.6	protein_coding	26365264,26367990,26368178,26368565,26370322,26372897,26373276,26373387,26374327,26374771,26375797	26365352,26368050,26368267,26368912,26370603,26373097,26373296,26373413,26374373,26374798,26376236	Gene ID= ENSG00000186470.13 TPM= 3.19 Transcript Type= protein_coding
chr6	26402237	26415216	26402237	26415216	+	ENST00000289361.10@BTN3A1	ENST00000289361.10	protein_coding	26402237,26405372,26405909,26407671,26409533,26409894,26410006,26411109,26411555,26413169	26402412,26405648,26406256,26407952,26409733,26409914,26410032,26411135,26411581,26415216	Gene ID= ENSG00000026950.16 TPM= 2.12 Transcript Type= protein_coding
chr6	26440472	26453415	26440472	26453415	+	ENST00000244519.6@BTN3A3	ENST00000244519.6	protein_coding	26440472,26443382,26443570,26443957,26445704,26448248,26448617,26448728,26449662,26450107,26451675	26440648,26443442,26443659,26444304,26445985,26448448,26448637,26448754,26449688,26450133,26453415	Gene ID= ENSG00000111801.15 TPM= 1.59 Transcript Type= protein_coding
chr6	26440499	26453414	26440499	26453414	+	transcript726.chr6.nic@BTN3A3	transcript726.chr6.nic	protein_coding	26440499,26443382,26443641,26443957,26445704,26448248,26448617,26448728,26449662,26450107,26451675	26440648,26443442,26443659,26444304,26445985,26448448,26448637,26448754,26449688,26450133,26453414	Gene ID= ENSG00000111801.15 TPM= 2.66 Transcript Type= NA
chr6	26457955	26469637	26457955	26469637	+	transcript729.chr6.nnic@BTN2A1	transcript729.chr6.nnic	protein_coding	26457955,26458607,26459481,26463244,26465218,26465953,26466062,26467948	26458142,26458718,26459828,26463525,26465406,26465973,26466088,26469637	Gene ID= ENSG00000112763.15 TPM= 3.19 Transcript Type= NA
chr6	26457904	26469653	26457904	26469653	+	ENST00000541522.5@BTN2A1	ENST00000541522.5	protein_coding	26457904,26459481,26463244,26465185,26465953,26466062,26467948	26458142,26459828,26463525,26465406,26465973,26466088,26469653	Gene ID= ENSG00000112763.15 TPM= 5.84 Transcript Type= protein_coding
chr6	26457925	26469637	26457925	26469637	+	ENST00000312541.9@BTN2A1	ENST00000312541.9	protein_coding	26457925,26458607,26459481,26463244,26465185,26465953,26466062,26467948	26458142,26458718,26459828,26463525,26465406,26465973,26466088,26469637	Gene ID= ENSG00000112763.15 TPM= 7.97 Transcript Type= protein_coding
chr6	26457961	26469637	26457961	26469637	+	ENST00000429381.5@BTN2A1	ENST00000429381.5	protein_coding	26457961,26458607,26459481,26463244,26465185,26465953,26466062,26467719	26458142,26458718,26459828,26463525,26465406,26465973,26466088,26469637	Gene ID= ENSG00000112763.15 TPM= 4.25 Transcript Type= protein_coding
chr6	26596952	26600744	26596952	26600744	+	ENST00000274849.2@ABT1	ENST00000274849.2	protein_coding	26596952,26597914,26598265	26597223,26598110,26600744	Gene ID= ENSG00000146109.4 TPM= 39.3 Transcript Type= protein_coding
chr6	26596970	26599144	26596970	26599144	+	transcript743.chr6.nnic@ABT1	transcript743.chr6.nnic	protein_coding	26596970,26598265	26597223,26599144	Gene ID= ENSG00000146109.4 TPM= 3.19 Transcript Type= NA
chr6	26634383	26659752	26634383	26659752	-	ENST00000415922.6@ZNF322	ENST00000415922.6	protein_coding	26659441,26658558,26643659,26634383	26659752,26658646,26643728,26638728	Gene ID= ENSG00000181315.10 TPM= 8.5 Transcript Type= protein_coding
chr6	27133042	27135291	27133042	27135291	+	ENST00000359193.3@HIST1H2AG	ENST00000359193.3	protein_coding	27133042	27135291	Gene ID= ENSG00000196787.3 TPM= 2.12 Transcript Type= protein_coding
chr6	27357823	27375260	27357823	27375260	-	transcript752.chr6.nnic@ZNF204P	transcript752.chr6.nnic	processed_pseudogene	27375194,27370136,27367517,27363179,27357823	27375260,27370224,27367612,27363302,27360221	Gene ID= ENSG00000204789.4 TPM= 2.12 Transcript Type= NA
chr6	27357825	27360221	27357825	27360221	-	ENST00000416749.1@ZNF204P	ENST00000416749.1	processed_pseudogene	27357825	27360221	Gene ID= ENSG00000204789.4 TPM= 2.12 Transcript Type= processed_pseudogene
chr6	27450743	27473107	27450743	27473107	-	transcript755.chr6.nnic@ZNF184	transcript755.chr6.nnic	protein_coding	27472729,27472288,27467853,27457283,27456826,27450743	27473107,27472433,27467920,27457409,27456921,27453260	Gene ID= ENSG00000096654.15 TPM= 2.12 Transcript Type= NA
chr6	27450743	27473118	27450743	27473118	-	ENST00000211936.10@ZNF184	ENST00000211936.10	protein_coding	27472973,27472288,27467853,27457283,27456826,27450743	27473118,27472433,27467920,27457409,27456921,27453260	Gene ID= ENSG00000096654.15 TPM= 4.25 Transcript Type= protein_coding
chr6	27825751	27827817	27825751	27827817	-	transcript759.chr6.nnic@NA	transcript759.chr6.nnic	NA	27825751	27827817	Gene ID= novel_gene_chr6_760 TPM= 3.19 Transcript Type= NA
chr6	27835505	27838376	27835505	27838376	-	transcript761.chr6.nnic@NA	transcript761.chr6.nnic	NA	27835505	27838376	Gene ID= novel_gene_chr6_762 TPM= 2.12 Transcript Type= NA
chr6	28078792	28081130	28078792	28081130	-	ENST00000605945.1@AL121944.1	ENST00000605945.1	antisense_RNA	28080626,28078792	28081130,28078972	Gene ID= ENSG00000272009.1 TPM= 5.31 Transcript Type= antisense_RNA
chr6	28124580	28130082	28124580	28130082	+	transcript768.chr6.nnic@ZSCAN16	transcript768.chr6.nnic	protein_coding	28124580,28125363,28126783,28129430	28124677,28125830,28126921,28130082	Gene ID= ENSG00000196812.4 TPM= 2.12 Transcript Type= NA
chr6	28124560	28130082	28124560	28130082	+	ENST00000340487.4@ZSCAN16	ENST00000340487.4	protein_coding	28124560,28125413,28126783,28129430	28124677,28125830,28126921,28130082	Gene ID= ENSG00000196812.4 TPM= 1.06 Transcript Type= protein_coding
chr6	28146314	28146978	28146314	28146978	+	transcript772.chr6.nnic@NA	transcript772.chr6.nnic	NA	28146314	28146978	Gene ID= novel_gene_chr6_773 TPM= 2.12 Transcript Type= NA
chr6	28225159	28229230	28225159	28229230	+	transcript776.chr6.nic@ZSCAN9	transcript776.chr6.nic	protein_coding	28225159,28227012,28227690	28225330,28227504,28229230	Gene ID= ENSG00000137185.11 TPM= 2.12 Transcript Type= NA
chr6	28225292	28233466	28225292	28233466	+	ENST00000252207.9@ZSCAN9	ENST00000252207.9	protein_coding	28225292,28227012,28227690,28232562	28225366,28227504,28227837,28233466	Gene ID= ENSG00000137185.11 TPM= 1.06 Transcript Type= protein_coding
chr6	28225339	28229230	28225339	28229230	+	ENST00000527436.5@ZSCAN9	ENST00000527436.5	protein_coding	28225339,28227012,28227690	28225366,28227504,28229230	Gene ID= ENSG00000137185.11 TPM= 3.19 Transcript Type= protein_coding
chr6	28225254	28226801	28225254	28226801	+	transcript778.chr6.nnic@NA	transcript778.chr6.nnic	NA	28225254	28226801	Gene ID= novel_gene_chr6_779 TPM= 3.19 Transcript Type= NA
chr6	28244623	28252224	28244623	28252224	-	ENST00000377294.2@ZKSCAN4	ENST00000377294.2	protein_coding	28251558,28249687,28248067,28246969,28244623	28252224,28249834,28248149,28247092,28245975	Gene ID= ENSG00000187626.8 TPM= 3.19 Transcript Type= protein_coding
chr6	28259320	28260958	28259320	28260958	+	ENST00000343684.3@NKAPL	ENST00000343684.3	protein_coding	28259320	28260958	Gene ID= ENSG00000189134.3 TPM= 3.19 Transcript Type= protein_coding
chr6	28267058	28278201	28267058	28278201	+	ENST00000316606.10@ZSCAN26	ENST00000316606.10	protein_coding	28267058,28271854,28272670,28276195	28267213,28271934,28272787,28278201	Gene ID= ENSG00000197062.11 TPM= 2.66 Transcript Type= protein_coding
chr6	28267010	28278221	28267010	28278221	+	ENST00000421553.6@ZSCAN26	ENST00000421553.6	protein_coding	28267010,28271854,28272670,28276195	28267213,28272339,28272787,28278221	Gene ID= ENSG00000197062.11 TPM= 5.84 Transcript Type= protein_coding
chr6	28267153	28277530	28267153	28277530	+	ENST00000623276.3@ZSCAN26	ENST00000623276.3	protein_coding	28267153,28271854,28272670,28276195	28267213,28272336,28272787,28277530	Gene ID= ENSG00000197062.11 TPM= 4.25 Transcript Type= protein_coding
chr6	28281572	28302549	28281572	28302549	+	ENST00000259883.3@PGBD1	ENST00000259883.3	protein_coding	28281572,28283756,28285551,28287080,28296816,28297895,28300724	28281918,28284209,28285707,28287168,28296945,28297991,28302549	Gene ID= ENSG00000137338.5 TPM= 1.06 Transcript Type= protein_coding
chr6	28324749	28336134	28324749	28336134	-	ENST00000446474.5@ZSCAN31	ENST00000446474.5	protein_coding	28335830,28327383,28324749	28336134,28327533,28326854	Gene ID= ENSG00000235109.7 TPM= 1.06 Transcript Type= protein_coding
chr6	28324737	28336134	28324737	28336134	-	ENST00000439158.5@ZSCAN31	ENST00000439158.5	protein_coding	28335830,28329303,28327383,28324737	28336134,28329778,28327533,28326854	Gene ID= ENSG00000235109.7 TPM= 2.12 Transcript Type= protein_coding
chr6	28349914	28369177	28349914	28369177	+	ENST00000252211.6@ZKSCAN3	ENST00000252211.6	protein_coding	28349914,28359525,28361324,28363303,28363692,28365426	28350067,28359988,28361471,28363385,28363815,28369177	Gene ID= ENSG00000189298.13 TPM= 4.25 Transcript Type= protein_coding
chr6	28372838	28374336	28372838	28374336	+	transcript813.chr6.nnic@NA	transcript813.chr6.nnic	NA	28372838	28374336	Gene ID= novel_gene_chr6_814 TPM= 3.19 Transcript Type= NA
chr6	28378959	28383396	28378959	28383396	-	transcript818.chr6.nnic@ZSCAN12	transcript818.chr6.nnic	protein_coding	28383264,28382191,28378959	28383396,28382609,28380871	Gene ID= ENSG00000158691.14 TPM= 2.12 Transcript Type= NA
chr6	28379219	28399731	28379219	28399731	-	ENST00000396827.3@ZSCAN12	ENST00000396827.3	protein_coding	28399657,28398004,28392902,28390596,28382191,28379219	28399731,28398473,28393046,28391742,28382609,28380871	Gene ID= ENSG00000158691.14 TPM= 1.06 Transcript Type= protein_coding
chr6	28903002	28923989	28903002	28923989	-	ENST00000377199.3@TRIM27	ENST00000377199.3	protein_coding	28923213,28921892,28920012,28911696,28908973,28908808,28907236,28903002	28923989,28921987,28920242,28911718,28909088,28908840,28907262,28904665	Gene ID= ENSG00000204713.10 TPM= 25.49 Transcript Type= protein_coding
chr6	29628129	29629828	29628129	29629828	+	transcript838.chr6.nnic@NA	transcript838.chr6.nnic	NA	29628129	29629828	Gene ID= novel_gene_chr6_839 TPM= 30.8 Transcript Type= NA
chr6	29656981	29672372	29656981	29672372	+	ENST00000376917.7@MOG	ENST00000376917.7	protein_coding	29656981,29659319,29666152,29667643,29667904,29670281,29670701,29671172	29657297,29659666,29666265,29667663,29667924,29670397,29670721,29672372	Gene ID= ENSG00000204655.11 TPM= 3.19 Transcript Type= protein_coding
chr6	29722775	29726525	29722775	29726525	+	transcript842.chr6.nic@HLA-F	transcript842.chr6.nic	protein_coding	29722775,29724173,29725031,29725447,29726011,29726403	29723927,29724448,29725306,29725563,29726043,29726525	Gene ID= ENSG00000204642.13 TPM= 7.44 Transcript Type= NA
chr6	29723401	29726512	29723401	29726512	+	transcript849.chr6.nic@HLA-F	transcript849.chr6.nic	protein_coding	29723401,29725031,29725447	29724448,29725306,29726512	Gene ID= ENSG00000204642.13 TPM= 3.19 Transcript Type= NA
chr6	29722775	29726526	29722775	29726526	+	ENST00000376861.5@HLA-F	ENST00000376861.5	protein_coding	29722775,29723306,29723658,29724173,29725031,29725447,29726011,29726403	29723000,29723527,29723927,29724448,29725306,29725563,29726043,29726526	Gene ID= ENSG00000204642.13 TPM= 14.87 Transcript Type= protein_coding
chr6	29726599	29732583	29726599	29732583	-	transcript860.chr6.nnic@NA	transcript860.chr6.nnic	NA	29726599	29732583	Gene ID= novel_gene_chr6_861 TPM= 2.12 Transcript Type= NA
chr6	29735849	29749059	29735849	29749059	-	transcript851.chr6.nic@HLA-F-AS1	transcript851.chr6.nic	processed_transcript	29748900,29747148,29735849	29749059,29747425,29738886	Gene ID= ENSG00000214922.9 TPM= 3.19 Transcript Type= NA
chr6	29743848	29746465	29743848	29746465	+	transcript858.chr6.nnic@NA	transcript858.chr6.nnic	NA	29743848	29746465	Gene ID= novel_gene_chr6_859 TPM= 2.12 Transcript Type= NA
chr6	29791030	29792522	29791030	29792522	-	transcript862.chr6.nnic@NA	transcript862.chr6.nnic	NA	29791030	29792522	Gene ID= novel_gene_chr6_863 TPM= 3.19 Transcript Type= NA
chr6	29890791	29891067	29890791	29891067	+	transcript880.chr6.nnic@NA	transcript880.chr6.nnic	NA	29890791	29891067	Gene ID= novel_gene_chr6_881 TPM= 2.12 Transcript Type= NA
chr6	29942532	29945884	29942532	29945884	+	transcript868.chr6.nnic@HLA-A	transcript868.chr6.nnic	protein_coding	29942532,29942757,29943268,29944122,29944500,29945041,29945234,29945451	29942626,29943026,29943543,29944397,29944616,29945091,29945281,29945884	Gene ID= ENSG00000206503.12 TPM= 15.4 Transcript Type= NA
chr6	30061259	30064909	30061259	30064909	+	ENST00000359374.8@ZNRD1	ENST00000359374.8	protein_coding	30061259,30061515,30061917,30062224,30064673	30061398,30061669,30062017,30062333,30064909	Gene ID= ENSG00000066379.14 TPM= 7.44 Transcript Type= protein_coding
chr6	30061254	30064909	30061254	30064909	+	ENST00000332435.9@ZNRD1	ENST00000332435.9	protein_coding	30061254,30061917,30062224,30064673	30061669,30062017,30062333,30064909	Gene ID= ENSG00000066379.14 TPM= 14.87 Transcript Type= protein_coding
chr6	30067198	30074005	30067198	30074005	+	transcript888.chr6.nnic@PPP1R11	transcript888.chr6.nnic	protein_coding	30067198,30068590,30069104,30070026,30073483,30073774	30067479,30068698,30069195,30070106,30073560,30074005	Gene ID= ENSG00000204619.7 TPM= 3.19 Transcript Type= NA
chr6	30067205	30070333	30067205	30070333	+	ENST00000376769.6@PPP1R11	ENST00000376769.6	protein_coding	30067205,30068279,30068590,30069104	30067479,30068353,30068698,30070333	Gene ID= ENSG00000204619.7 TPM= 3.72 Transcript Type= protein_coding
chr6	30067088	30070333	30067088	30070333	+	ENST00000376772.7@PPP1R11	ENST00000376772.7	protein_coding	30067088,30068590,30069104	30067479,30068698,30070333	Gene ID= ENSG00000204619.7 TPM= 81.26 Transcript Type= protein_coding
chr6	30184455	30213427	30184455	30213427	-	transcript895.chr6.nic@TRIM26	transcript895.chr6.nic	protein_coding	30213305,30204656,30201035,30198666,30198429,30196516,30190013,30189418,30189167,30184455	30213427,30204765,30201138,30199153,30198524,30196746,30190035,30189533,30189199,30186558	Gene ID= ENSG00000234127.8 TPM= 19.12 Transcript Type= NA
chr6	30184455	30213427	30184455	30213427	-	ENST00000453195.5@TRIM26	ENST00000453195.5	protein_coding	30213305,30201035,30198666,30198429,30196516,30190013,30189418,30189167,30184455	30213427,30201138,30199153,30198524,30196746,30190035,30189533,30189199,30186558	Gene ID= ENSG00000234127.8 TPM= 15.93 Transcript Type= protein_coding
chr6	30291375	30326866	30291375	30326866	-	ENST00000412685.6@HCG18	ENST00000412685.6	antisense_RNA	30326354,30314269,30296132,30294471,30291375	30326866,30314482,30296237,30294964,30292599	Gene ID= ENSG00000231074.8 TPM= 2.12 Transcript Type= antisense_RNA
chr6	30291006	30327150	30291006	30327150	-	ENST00000426882.5@HCG18	ENST00000426882.5	antisense_RNA	30326354,30296132,30291006	30327150,30296237,30294964	Gene ID= ENSG00000231074.8 TPM= 2.12 Transcript Type= antisense_RNA
chr6	30306817	30308722	30306817	30308722	-	transcript921.chr6.nnic@NA	transcript921.chr6.nnic	NA	30306817	30308722	Gene ID= novel_gene_chr6_922 TPM= 3.19 Transcript Type= NA
chr6	30326844	30343729	30326844	30343729	+	ENST00000396551.7@TRIM39	ENST00000396551.7	protein_coding	30326844,30328889,30329311,30330781,30335745,30339908,30340505,30341712	30326995,30329041,30329770,30330876,30335975,30339930,30340620,30343729	Gene ID= ENSG00000204599.14 TPM= 9.56 Transcript Type= protein_coding
chr6	30326920	30343729	30326920	30343729	+	ENST00000396548.5@TRIM39	ENST00000396548.5	protein_coding	30326920,30327652,30328909,30329311,30330781,30335745,30339908,30340505,30341712	30326995,30327696,30329041,30329770,30330876,30335975,30339930,30340620,30343729	Gene ID= ENSG00000204599.14 TPM= 4.25 Transcript Type= protein_coding
chr6	30345159	30346857	30345159	30346857	+	ENST00000428040.6@RPP21	ENST00000428040.6	protein_coding	30345159,30345491,30346432,30346713	30345398,30345573,30346557,30346857	Gene ID= ENSG00000241370.5 TPM= 3.54 Transcript Type= protein_coding
chr6	30345155	30346857	30345155	30346857	+	ENST00000473266.1@RPP21	ENST00000473266.1	protein_coding	30345155,30345298,30346432,30346713	30345228,30345573,30346557,30346857	Gene ID= ENSG00000241370.5 TPM= 3.54 Transcript Type= retained_intron
chr6	30345151	30346857	30345151	30346857	+	ENST00000489124.5@RPP21	ENST00000489124.5	protein_coding	30345151,30345298,30346432,30346713	30345228,30345398,30346557,30346857	Gene ID= ENSG00000241370.5 TPM= 1.41 Transcript Type= processed_transcript
chr6	30489467	30494205	30489467	30494205	+	ENST00000376630.4@HLA-E	ENST00000376630.4	protein_coding	30489467,30489726,30490240,30491137,30491537,30492404,30492541,30492749	30489595,30489995,30490515,30491412,30491653,30492436,30492583,30494205	Gene ID= ENSG00000204592.8 TPM= 305.9 Transcript Type= protein_coding
chr6	30545964	30557219	30545964	30557219	-	transcript936.chr6.nnic@GNL1	transcript936.chr6.nnic	protein_coding	30556131,30555555,30555055,30554764,30554575,30554090,30553350,30553084,30552467,30547352,30547112,30546696,30545964	30557219,30555720,30555191,30554915,30554646,30554224,30553557,30553179,30552661,30547530,30547274,30546836,30546313	Gene ID= ENSG00000204590.12 TPM= 4.25 Transcript Type= NA
chr6	30545964	30556064	30545964	30556064	-	transcript941.chr6.nic@GNL1	transcript941.chr6.nic	protein_coding	30555555,30555055,30554764,30554575,30553350,30553084,30552467,30547352,30547112,30546696,30545964	30556064,30555191,30554915,30554646,30553557,30553179,30552661,30547530,30547274,30546836,30546313	Gene ID= ENSG00000204590.12 TPM= 9.56 Transcript Type= NA
chr6	30542074	30545756	30542074	30545756	-	transcript945.chr6.nnic@NA	transcript945.chr6.nnic	NA	30542074	30545756	Gene ID= novel_gene_chr6_946 TPM= 2.12 Transcript Type= NA
chr6	30571376	30591532	30571376	30591532	+	ENST00000326195.12@ABCF1	ENST00000326195.12	protein_coding	30571376,30577409,30577818,30578076,30578348,30578470,30579931,30580406,30582394,30583066,30583608,30583805,30584192,30584418,30585260,30585558,30585879,30586134,30586474,30586641,30589688,30589806,30590149,30590306,30590535	30571560,30577455,30577913,30578202,30578385,30578577,30580005,30580519,30582507,30583188,30583708,30583890,30584331,30584566,30585343,30585682,30585991,30586305,30586548,30586711,30589720,30589974,30590213,30590378,30591532	Gene ID= ENSG00000204574.12 TPM= 23.37 Transcript Type= protein_coding
chr6	30593249	30594206	30593249	30594206	-	transcript970.chr6.nnic@NA	transcript970.chr6.nnic	NA	30593249	30594206	Gene ID= novel_gene_chr6_971 TPM= 2.12 Transcript Type= NA
chr6	30600400	30617244	30600400	30617244	-	ENST00000376511.6@PPP1R10	ENST00000376511.6	protein_coding	30617224,30616478,30609838,30609077,30608779,30607840,30606779,30606468,30606138,30605923,30604994,30604588,30604353,30604008,30603780,30603472,30603210,30602846,30601936,30600400	30617244,30616998,30609955,30609163,30608914,30607891,30606856,30606641,30606243,30606035,30605094,30604735,30604511,30604254,30603843,30603666,30603285,30602959,30602691,30601658	Gene ID= ENSG00000204569.9 TPM= 25.49 Transcript Type= protein_coding
chr6	30615584	30617246	30615584	30617246	-	transcript964.chr6.nic@PPP1R10	transcript964.chr6.nic	protein_coding	30617224,30615584	30617246,30616998	Gene ID= ENSG00000204569.9 TPM= 3.19 Transcript Type= NA
chr6	30617709	30626395	30617709	30626395	+	ENST00000259873.4@MRPS18B	ENST00000259873.4	protein_coding	30617709,30619493,30619709,30619921,30622832,30624883,30625502	30617943,30619601,30619806,30619989,30622898,30624942,30626395	Gene ID= ENSG00000204568.11 TPM= 193.31 Transcript Type= protein_coding
chr6	30626856	30646823	30626856	30646823	+	ENST00000376485.8@ATAT1	ENST00000376485.8	protein_coding	30626856,30627460,30627636,30627851,30628032,30628329,30640377,30640535,30642176,30642768,30645895,30646067,30646469	30626992,30627520,30627727,30627911,30628145,30628430,30640422,30640603,30642247,30643011,30645974,30646109,30646823	Gene ID= ENSG00000137343.17 TPM= 2.12 Transcript Type= protein_coding
chr6	30626876	30644679	30626876	30644679	+	ENST00000376483.8@ATAT1	ENST00000376483.8	protein_coding	30626876,30627460,30627636,30627851,30628032,30628329,30640377,30640535,30642176,30642768	30626992,30627520,30627727,30627911,30628145,30628430,30640422,30640603,30642247,30644679	Gene ID= ENSG00000137343.17 TPM= 1.94 Transcript Type= protein_coding
chr6	30626875	30644679	30626875	30644679	+	ENST00000319027.9@ATAT1	ENST00000319027.9	protein_coding	30626875,30627460,30627636,30627851,30628032,30628329,30640377,30642176,30642768,30643529	30626992,30627520,30627727,30627911,30628145,30628430,30640422,30642247,30643011,30644679	Gene ID= ENSG00000137343.17 TPM= 2.47 Transcript Type= protein_coding
chr6	30626842	30644679	30626842	30644679	+	ENST00000318999.11@ATAT1	ENST00000318999.11	protein_coding	30626842,30627460,30627636,30627851,30628032,30628329,30640377,30642176,30642768	30626992,30627520,30627727,30627911,30628145,30628430,30640422,30642247,30644679	Gene ID= ENSG00000137343.17 TPM= 3.01 Transcript Type= protein_coding
chr6	30647039	30653209	30647039	30653209	+	ENST00000293604.10@C6orf136	ENST00000293604.10	protein_coding	30647039,30649558,30650994,30651266,30652648,30652802	30647846,30649959,30651082,30651466,30652717,30653209	Gene ID= ENSG00000204564.11 TPM= 12.75 Transcript Type= protein_coding
chr6	30647055	30653109	30647055	30653109	+	ENST00000488383.5@C6orf136	ENST00000488383.5	protein_coding	30647055,30649558,30650994,30651266,30652648,30652802	30647303,30649959,30651100,30651466,30652717,30653109	Gene ID= ENSG00000204564.11 TPM= 31.33 Transcript Type= nonsense_mediated_decay
chr6	30647421	30653109	30647421	30653109	+	ENST00000446773.6@C6orf136	ENST00000446773.6	protein_coding	30647421,30649558,30650994,30651266,30652648,30652802	30647846,30649959,30651082,30651466,30652717,30653109	Gene ID= ENSG00000204564.11 TPM= 30.27 Transcript Type= protein_coding
chr6	30653119	30673013	30653119	30673013	-	transcript972.chr6.nnic@DHX16	transcript972.chr6.nnic	protein_coding	30672635,30671036,30670790,30670410,30665479,30665071,30664801,30662911,30662627,30661756,30660032,30659736,30659472,30656952,30656597,30656391,30656198,30655435,30655175,30654706,30653119	30673013,30671274,30670952,30670466,30665733,30665274,30664992,30663021,30662742,30662431,30660242,30659834,30659624,30657092,30656759,30656509,30656265,30655597,30655336,30654879,30653370	Gene ID= ENSG00000204560.9 TPM= 6.9 Transcript Type= NA
chr6	30653119	30673037	30653119	30673037	-	ENST00000376442.7@DHX16	ENST00000376442.7	protein_coding	30672635,30671036,30670790,30670410,30665479,30665071,30664801,30662911,30662627,30660032,30659736,30659472,30656952,30656597,30656391,30656198,30655435,30655175,30654706,30653119	30673037,30671274,30670952,30670466,30665733,30665274,30664992,30663021,30662742,30660242,30659834,30659624,30657092,30656759,30656509,30656265,30655597,30655336,30654879,30653370	Gene ID= ENSG00000204560.9 TPM= 35.58 Transcript Type= protein_coding
chr6	30676389	30687216	30676389	30687216	-	ENST00000399199.7@PPP1R18	ENST00000399199.7	protein_coding	30687114,30684408,30679179,30676389	30687216,30686046,30679389,30677288	Gene ID= ENSG00000146112.11 TPM= 26.55 Transcript Type= protein_coding
chr6	30699807	30717889	30699807	30717889	-	ENST00000376406.7@MDC1	ENST00000376406.7	protein_coding	30717245,30715040,30713803,30713648,30711874,30711667,30711412,30707566,30707384,30703621,30703418,30703104,30702752,30702553,30699807	30717889,30715178,30714183,30713717,30713354,30711726,30711504,30708357,30707454,30706098,30703537,30703286,30702877,30702663,30700632	Gene ID= ENSG00000137337.14 TPM= 11.68 Transcript Type= protein_coding
chr6	30713067	30714932	30713067	30714932	+	transcript1001.chr6.nnic@NA	transcript1001.chr6.nnic	NA	30713067	30714932	Gene ID= novel_gene_chr6_1002 TPM= 2.12 Transcript Type= NA
chr6	30720201	30725426	30720201	30725426	+	ENST00000327892.12@TUBB	ENST00000327892.12	protein_coding	30720201,30722537,30722918,30723340	30720563,30722645,30723028,30725426	Gene ID= ENSG00000196230.12 TPM= 72.76 Transcript Type= protein_coding
chr6	30721574	30725426	30721574	30725426	+	ENST00000330914.7@TUBB	ENST00000330914.7	protein_coding	30721574,30722537,30722918,30723340	30721898,30722645,30723028,30725426	Gene ID= ENSG00000196230.12 TPM= 17.53 Transcript Type= protein_coding
chr6	30727709	30742733	30727709	30742733	-	ENST00000376389.7@FLOT1	ENST00000376389.7	protein_coding	30742527,30742147,30741792,30741614,30741190,30740679,30740496,30740158,30730919,30730682,30730428,30730022,30727709	30742733,30742203,30741867,30741704,30741333,30740798,30740591,30740310,30731100,30730727,30730565,30730186,30728145	Gene ID= ENSG00000137312.14 TPM= 58.42 Transcript Type= protein_coding
chr6	30742929	30743592	30742929	30743592	+	ENST00000607333.1@AL662797.2	ENST00000607333.1	antisense_RNA	30742929,30743234	30743096,30743592	Gene ID= ENSG00000272273.1 TPM= 1.06 Transcript Type= antisense_RNA
chr6	30743199	30744554	30743199	30744554	-	ENST00000259874.5@IER3	ENST00000259874.5	protein_coding	30744309,30743199	30744554,30744196	Gene ID= ENSG00000137331.11 TPM= 73.29 Transcript Type= protein_coding
chr6	30743199	30744548	30743199	30744548	-	ENST00000376377.2@IER3	ENST00000376377.2	protein_coding	30743199	30744548	Gene ID= ENSG00000137331.11 TPM= 48.86 Transcript Type= protein_coding
chr6	30884211	30900156	30884211	30900156	+	transcript1058.chr6.nnic@DDR1	transcript1058.chr6.nnic	protein_coding	30884211,30888688,30888908,30889202,30890973,30891380,30892002,30892296,30893068,30893272,30894506,30896621,30897014,30897379,30898073,30898888,30899156,30899520	30884710,30888814,30889010,30889430,30891120,30891479,30892188,30892542,30893163,30893423,30894671,30896865,30897141,30897597,30898307,30899037,30899290,30900156	Gene ID= ENSG00000204580.13 TPM= 8.85 Transcript Type= NA
chr6	30884468	30900156	30884468	30900156	+	transcript1059.chr6.nic@DDR1	transcript1059.chr6.nic	protein_coding	30884468,30885625,30888688,30888908,30889202,30890973,30891380,30892002,30892296,30893068,30893272,30894506,30896621,30897014,30897379,30898073,30898888,30899156	30884710,30885680,30888814,30889010,30889430,30891120,30891479,30892188,30892542,30893163,30893423,30894671,30896865,30897141,30897597,30898307,30899037,30900156	Gene ID= ENSG00000204580.13 TPM= 24.78 Transcript Type= NA
chr6	30884336	30900156	30884336	30900156	+	transcript1061.chr6.nic@DDR1	transcript1061.chr6.nic	protein_coding	30884336,30888688,30888908,30889202,30890973,30891380,30892002,30892296,30893068,30893272,30894506,30896621,30897014,30897379,30898073,30898888,30899156	30884710,30888814,30889010,30889430,30891120,30891479,30892188,30892542,30893163,30893423,30894671,30896865,30897141,30897597,30898307,30899037,30900156	Gene ID= ENSG00000204580.13 TPM= 37.53 Transcript Type= NA
chr6	30914227	30926459	30914227	30926459	+	transcript1062.chr6.nic@VARS2	transcript1062.chr6.nic	protein_coding	30914227,30914805,30915156,30915355,30915746,30915981,30916152,30916878,30917105,30917695,30918827,30919758,30920089,30920333,30920668,30921065,30921230,30921589,30921925,30922116,30922450,30922706,30922898,30923104,30923353,30924354,30925274,30925544,30925880,30926109	30914344,30915037,30915237,30915455,30915867,30916047,30916249,30916959,30917224,30917806,30918915,30919848,30920216,30920436,30920749,30921141,30921305,30921691,30921995,30922241,30922554,30922774,30922976,30923231,30923505,30924560,30925385,30925719,30926008,30926459	Gene ID= ENSG00000137411.16 TPM= 18.41 Transcript Type= NA
chr6	30914205	30926459	30914205	30926459	+	ENST00000321897.9@VARS2	ENST00000321897.9	protein_coding	30914205,30915156,30915355,30915746,30915981,30916152,30916878,30917105,30917695,30918827,30919758,30920089,30920333,30920668,30921065,30921230,30921589,30921925,30922116,30922450,30922706,30922898,30923104,30923353,30924354,30925274,30925544,30925880,30926109	30915037,30915237,30915455,30915867,30916047,30916249,30916959,30917224,30917806,30918915,30919848,30920216,30920436,30920749,30921141,30921305,30921691,30921995,30922241,30922554,30922774,30922976,30923231,30923505,30924560,30925385,30925719,30926008,30926459	Gene ID= ENSG00000137411.16 TPM= 7.79 Transcript Type= protein_coding
chr6	30914331	30926413	30914331	30926413	+	ENST00000541562.5@VARS2	ENST00000541562.5	protein_coding	30914331,30914805,30915156,30915355,30915746,30915981,30916152,30916878,30917105,30917695,30918827,30919758,30920089,30920333,30920668,30921065,30921230,30921589,30921925,30922116,30922450,30922706,30922898,30923104,30923353,30924354,30925274,30925544,30925880,30926109	30914469,30915037,30915237,30915455,30915867,30916047,30916249,30916959,30917224,30917806,30918915,30919848,30920216,30920436,30920749,30921141,30921305,30921691,30921995,30922241,30922554,30922774,30922976,30923231,30923505,30924560,30925385,30925719,30926008,30926413	Gene ID= ENSG00000137411.16 TPM= 3.54 Transcript Type= protein_coding
chr6	31114750	31118820	31114750	31118820	+	ENST00000467107.1@PSORS1C1	ENST00000467107.1	protein_coding	31114750,31115136	31114891,31118820	Gene ID= ENSG00000204540.10 TPM= 4.25 Transcript Type= processed_transcript
chr6	31142439	31158238	31142439	31158238	-	ENST00000376266.9@CCHCR1	ENST00000376266.9	protein_coding	31158167,31157023,31156731,31154496,31150959,31150725,31150455,31150066,31148618,31148405,31145696,31145448,31145166,31144885,31144687,31143262,31142963,31142439	31158238,31157089,31156944,31154799,31151122,31150860,31150565,31150215,31148728,31148511,31145808,31145493,31145302,31145073,31144788,31143413,31143134,31142716	Gene ID= ENSG00000204536.13 TPM= 17.53 Transcript Type= protein_coding
chr6	31142439	31158205	31142439	31158205	-	transcript1077.chr6.nic@CCHCR1	transcript1077.chr6.nic	protein_coding	31158167,31157023,31156731,31154496,31150959,31150725,31150455,31150066,31148618,31148405,31145696,31145448,31145166,31144885,31144687,31143262,31142963,31142439	31158205,31157155,31156944,31154799,31151122,31150860,31150565,31150215,31148728,31148511,31145808,31145493,31145302,31145073,31144788,31143413,31143134,31142716	Gene ID= ENSG00000204536.13 TPM= 6.9 Transcript Type= NA
chr6	31158547	31164215	31158547	31164215	+	ENST00000376255.4@TCF19	ENST00000376255.4	protein_coding	31158547,31159143,31161447,31162477	31158722,31159707,31162005,31164215	Gene ID= ENSG00000137310.11 TPM= 1.06 Transcript Type= protein_coding
chr6	31195200	31198037	31195200	31198037	-	ENST00000606367.1@AL662844.4	ENST00000606367.1	antisense_RNA	31195200	31198037	Gene ID= ENSG00000272501.1 TPM= 8.5 Transcript Type= antisense_RNA
chr6	31268749	31272142	31268749	31272142	-	transcript1098.chr6.nic@HLA-C	transcript1098.chr6.nic	protein_coding	31271999,31271073,31270210,31269966,31269493,31269338,31268749	31272142,31271868,31270485,31270085,31269525,31269385,31269173	Gene ID= ENSG00000204525.16 TPM= 35.4 Transcript Type= NA
chr6	31268749	31272086	31268749	31272086	-	ENST00000376228.9@HLA-C	ENST00000376228.9	protein_coding	31271999,31271599,31271073,31270210,31269966,31269493,31269338,31268749	31272086,31271868,31271348,31270485,31270085,31269525,31269385,31269173	Gene ID= ENSG00000204525.16 TPM= 350.86 Transcript Type= protein_coding
chr6	31268749	31272050	31268749	31272050	-	ENST00000487245.5@HLA-C	ENST00000487245.5	protein_coding	31271073,31270210,31269966,31269493,31269338,31268749	31272050,31270485,31270085,31269525,31269385,31269173	Gene ID= ENSG00000204525.16 TPM= 33.28 Transcript Type= retained_intron
chr6	31268837	31271704	31268837	31271704	-	transcript1103.chr6.nnic@NA	transcript1103.chr6.nnic	NA	31268837	31271704	Gene ID= novel_gene_chr6_1104 TPM= 3.19 Transcript Type= NA
chr6	31353872	31357187	31353872	31357187	-	ENST00000412585.6@HLA-B	ENST00000412585.6	protein_coding	31357086,31356688,31356167,31355317,31355107,31354633,31354479,31353872	31357187,31356957,31356442,31355592,31355223,31354665,31354526,31354296	Gene ID= ENSG00000234745.10 TPM= 191.19 Transcript Type= protein_coding
chr6	31403579	31415315	31403579	31415315	+	ENST00000449934.6@MICA	ENST00000449934.6	protein_coding	31403579,31410543,31411072,31411947,31412325,31415012	31403702,31410797,31411359,31412225,31412460,31415315	Gene ID= ENSG00000204520.12 TPM= 13.81 Transcript Type= protein_coding
chr6	31405829	31409015	31405829	31409015	+	transcript1116.chr6.nnic@NA	transcript1116.chr6.nnic	NA	31405829	31409015	Gene ID= novel_gene_chr6_1117 TPM= 2.12 Transcript Type= NA
chr6	31400702	31465809	31400702	31465809	+	ENST00000414046.2@HCP5	ENST00000414046.2	sense_overlapping	31400702,31463123,31463371	31400763,31463279,31465809	Gene ID= ENSG00000206337.10 TPM= 6.37 Transcript Type= sense_overlapping
chr6	31463182	31465704	31463182	31465704	+	ENST00000541196.2@HCP5	ENST00000541196.2	sense_overlapping	31463182,31463371	31463279,31465704	Gene ID= ENSG00000206337.10 TPM= 5.31 Transcript Type= sense_overlapping
chr6	31494881	31511123	31494881	31511123	+	ENST00000538442.5@MICB	ENST00000538442.5	protein_coding	31494881,31505617,31506143,31507022,31507400,31509782	31494995,31505871,31506430,31507300,31507531,31511123	Gene ID= ENSG00000204516.9 TPM= 1.06 Transcript Type= protein_coding
chr6	31530219	31541760	31530219	31541760	-	transcript1124.chr6.nic@DDX39B	transcript1124.chr6.nic	protein_coding	31541634,31540322,31539147,31538763,31536500,31535367,31532780,31531296,31531053,31530779,31530219	31541760,31540534,31539274,31538855,31536683,31535485,31532911,31531405,31531197,31530926,31530450	Gene ID= ENSG00000198563.13 TPM= 9.03 Transcript Type= NA
chr6	31530219	31542448	31530219	31542448	-	ENST00000458640.5@DDX39B	ENST00000458640.5	protein_coding	31541950,31540322,31539147,31538763,31536500,31535367,31532780,31531296,31531053,31530779,31530219	31542448,31540534,31539274,31538855,31536683,31535485,31532911,31531405,31531197,31530926,31530450	Gene ID= ENSG00000198563.13 TPM= 84.44 Transcript Type= protein_coding
chr6	31530219	31542017	31530219	31542017	-	ENST00000462256.5@DDX39B	ENST00000462256.5	protein_coding	31541950,31540322,31539147,31538763,31536500,31532780,31531296,31531053,31530779,31530219	31542017,31540534,31539274,31538855,31536683,31535485,31531405,31531197,31530926,31530450	Gene ID= ENSG00000198563.13 TPM= 19.65 Transcript Type= retained_intron
chr6	31530219	31542001	31530219	31542001	-	transcript1127.chr6.nnic@ATP6V1G2-DDX39B	transcript1127.chr6.nnic	protein_coding	31541950,31540322,31539147,31538763,31536500,31535367,31532780,31531296,31531053,31530779,31530219	31542001,31540577,31539274,31538855,31536683,31535485,31532911,31531405,31531197,31530926,31530450	Gene ID= ENSG00000254870.5 TPM= 9.03 Transcript Type= NA
chr6	31544462	31546844	31544462	31546844	-	ENST00000303892.9@ATP6V1G2	ENST00000303892.9	protein_coding	31546478,31546109,31544462	31546844,31546209,31545581	Gene ID= ENSG00000213760.10 TPM= 4.25 Transcript Type= protein_coding
chr6	31546870	31558829	31546870	31558829	+	ENST00000376146.8@NFKBIL1	ENST00000376146.8	protein_coding	31546870,31548163,31557628,31558022	31546973,31548439,31557849,31558829	Gene ID= ENSG00000204498.10 TPM= 2.3 Transcript Type= protein_coding
chr6	31547581	31558829	31547581	31558829	+	ENST00000376148.8@NFKBIL1	ENST00000376148.8	protein_coding	31547581,31548163,31557628,31558022	31547751,31548439,31557849,31558829	Gene ID= ENSG00000204498.10 TPM= 13.99 Transcript Type= protein_coding
chr6	31547613	31558829	31547613	31558829	+	ENST00000376145.8@NFKBIL1	ENST00000376145.8	protein_coding	31547613,31548163,31557628,31558022	31547751,31548439,31557804,31558829	Gene ID= ENSG00000204498.10 TPM= 1.77 Transcript Type= protein_coding
chr6	31580555	31582425	31580555	31582425	-	ENST00000429299.2@LTB	ENST00000429299.2	protein_coding	31582256,31581814,31581559,31580555	31582425,31581859,31581630,31581163	Gene ID= ENSG00000227507.2 TPM= 2.12 Transcript Type= protein_coding
chr6	31586179	31588909	31586179	31588909	+	ENST00000438075.6@LST1	ENST00000438075.6	protein_coding	31586179,31587200,31587641,31587944,31588518	31586315,31587318,31587733,31587966,31588909	Gene ID= ENSG00000204482.10 TPM= 1.06 Transcript Type= protein_coding
chr6	31586124	31588909	31586124	31588909	+	ENST00000418507.6@LST1	ENST00000418507.6	protein_coding	31586124,31587200,31587944,31588518	31586315,31587318,31587966,31588909	Gene ID= ENSG00000204482.10 TPM= 1.06 Transcript Type= protein_coding
chr6	31586217	31588909	31586217	31588909	+	ENST00000376096.5@LST1	ENST00000376096.5	protein_coding	31586217,31587200,31588563	31586315,31587318,31588909	Gene ID= ENSG00000204482.10 TPM= 2.12 Transcript Type= protein_coding
chr6	31587255	31588757	31587255	31588757	+	ENST00000460834.1@LST1	ENST00000460834.1	protein_coding	31587255,31587816,31588518	31587318,31587966,31588757	Gene ID= ENSG00000204482.10 TPM= 1.06 Transcript Type= retained_intron
chr6	31615184	31617021	31615184	31617021	+	ENST00000376059.7@AIF1	ENST00000376059.7	protein_coding	31615184,31615521,31615670,31616104,31616344,31616816	31615354,31615582,31615736,31616145,31616506,31617021	Gene ID= ENSG00000204472.12 TPM= 3.72 Transcript Type= protein_coding
chr6	31615227	31617021	31615227	31617021	+	ENST00000337917.11@AIF1	ENST00000337917.11	protein_coding	31615227,31615521,31615670,31616104,31616344,31616816	31615293,31615582,31615736,31616145,31616506,31617021	Gene ID= ENSG00000204472.12 TPM= 2.66 Transcript Type= protein_coding
chr6	31639029	31652382	31639029	31652382	-	transcript1151.chr6.nic@BAG6	transcript1151.chr6.nic	protein_coding	31652247,31651656,31649510,31649199,31648911,31648677,31647591,31646394,31645407,31644946,31644525,31644307,31644082,31643890,31642829,31642112,31641776,31641539,31641320,31641104,31640792,31640645,31640385,31640199,31639500,31639029	31652382,31651776,31649627,31649395,31648964,31648751,31647826,31646523,31645604,31645198,31644602,31644414,31644194,31643977,31643115,31642403,31641945,31641592,31641422,31641228,31640938,31640704,31640528,31640306,31639646,31639226	Gene ID= ENSG00000204463.12 TPM= 22.66 Transcript Type= NA
chr6	31639028	31652705	31639028	31652705	-	ENST00000211379.9@BAG6	ENST00000211379.9	protein_coding	31652424,31651656,31649510,31649199,31648911,31648677,31647591,31646394,31645407,31644946,31644525,31644082,31643890,31642829,31642112,31641776,31641539,31641320,31641104,31640792,31640645,31640385,31640199,31639500,31639028	31652705,31651776,31649627,31649395,31648964,31648751,31647826,31646523,31645604,31645198,31644602,31644194,31643977,31643115,31642403,31641945,31641592,31641422,31641228,31640938,31640704,31640528,31640306,31639646,31639226	Gene ID= ENSG00000204463.12 TPM= 20.27 Transcript Type= protein_coding
chr6	31639029	31652382	31639029	31652382	-	transcript1157.chr6.nic@BAG6	transcript1157.chr6.nic	protein_coding	31652247,31651656,31649510,31649199,31648911,31648677,31647591,31646394,31645407,31644946,31644525,31644082,31643890,31642829,31642112,31641776,31641539,31641320,31641104,31640792,31640645,31640385,31640199,31639029	31652382,31651776,31649627,31649395,31648964,31648751,31647826,31646523,31645604,31645198,31644602,31644194,31643977,31643115,31642403,31641945,31641592,31641422,31641228,31640938,31640704,31640528,31640306,31639226	Gene ID= ENSG00000204463.12 TPM= 9.82 Transcript Type= NA
chr6	31639029	31652700	31639029	31652700	-	ENST00000362049.10@BAG6	ENST00000362049.10	protein_coding	31652424,31651656,31649510,31649199,31648911,31648677,31647591,31646394,31645407,31644946,31644525,31644082,31643890,31642829,31642112,31641776,31641539,31641320,31641104,31640792,31640645,31640385,31640199,31639029	31652700,31651776,31649627,31649395,31648964,31648751,31647826,31646523,31645604,31645198,31644602,31644194,31643977,31643115,31642403,31641945,31641592,31641422,31641228,31640938,31640704,31640528,31640306,31639226	Gene ID= ENSG00000204463.12 TPM= 14.07 Transcript Type= protein_coding
chr6	31652417	31658210	31652417	31658210	+	ENST00000375920.8@APOM	ENST00000375920.8	protein_coding	31652417,31656472,31657225,31657380,31657625,31658064	31652551,31656626,31657298,31657478,31657723,31658210	Gene ID= ENSG00000204444.10 TPM= 1.06 Transcript Type= protein_coding
chr6	31658298	31660772	31658298	31660772	-	ENST00000375911.1@C6orf47	ENST00000375911.1	protein_coding	31658298	31660772	Gene ID= ENSG00000204439.3 TPM= 56.29 Transcript Type= protein_coding
chr6	31662076	31665861	31662076	31665861	-	ENST00000375900.8@GPANK1	ENST00000375900.8	protein_coding	31665574,31664841,31663853,31662076	31665861,31665003,31664580,31662710	Gene ID= ENSG00000204438.10 TPM= 19.47 Transcript Type= protein_coding
chr6	31661229	31666283	31661229	31666283	-	ENST00000375906.5@GPANK1	ENST00000375906.5	protein_coding	31665861,31664841,31663853,31661229	31666283,31665003,31664577,31662710	Gene ID= ENSG00000204438.10 TPM= 1.41 Transcript Type= protein_coding
chr6	31662076	31665850	31662076	31665850	-	ENST00000375895.6@GPANK1	ENST00000375895.6	protein_coding	31665574,31664841,31663853,31662076	31665850,31665003,31664577,31662710	Gene ID= ENSG00000204438.10 TPM= 19.47 Transcript Type= protein_coding
chr6	31666064	31670070	31666064	31670070	+	ENST00000375882.6@CSNK2B	ENST00000375882.6	protein_coding	31666064,31666821,31667868,31668539,31669097,31669319,31669836	31666208,31666903,31667970,31668654,31669172,31669508,31670070	Gene ID= ENSG00000204435.13 TPM= 119.49 Transcript Type= protein_coding
chr6	31676700	31681476	31676700	31681476	-	ENST00000474395.5@LY6G5C	ENST00000474395.5	protein_coding	31681230,31679101,31676700	31681476,31679268,31677120	Gene ID= ENSG00000204428.12 TPM= 2.12 Transcript Type= processed_transcript
chr6	31686949	31703444	31686949	31703444	-	ENST00000395952.7@ABHD16A	ENST00000395952.7	protein_coding	31703150,31702074,31701274,31700942,31696948,31693359,31693027,31691804,31691579,31690539,31690078,31689581,31689015,31688723,31688249,31688041,31687824,31687642,31687498,31686949	31703444,31702130,31701340,31701028,31697033,31693432,31693149,31691918,31691680,31690602,31690127,31689704,31689119,31688786,31688305,31688103,31687900,31687740,31687544,31687295	Gene ID= ENSG00000204427.11 TPM= 74.35 Transcript Type= protein_coding
chr6	31727038	31729539	31727038	31729539	-	transcript1194.chr6.nic@DDAH2	transcript1194.chr6.nic	protein_coding	31729362,31728865,31728646,31728451,31728173,31727543,31727038	31729539,31729225,31728745,31728524,31728292,31727692,31727353	Gene ID= ENSG00000213722.8 TPM= 23.96 Transcript Type= NA
chr6	31727038	31729825	31727038	31729825	-	transcript1196.chr6.nic@DDAH2	transcript1196.chr6.nic	protein_coding	31729683,31728865,31728646,31728451,31728173,31727543,31727038	31729825,31729225,31728745,31728524,31728292,31727692,31727353	Gene ID= ENSG00000213722.8 TPM= 16.53 Transcript Type= NA
chr6	31727038	31730617	31727038	31730617	-	ENST00000375792.7@DDAH2	ENST00000375792.7	protein_coding	31730051,31728865,31728646,31728451,31728173,31727543,31727038	31730617,31729225,31728745,31728524,31728292,31727692,31727353	Gene ID= ENSG00000213722.8 TPM= 86.81 Transcript Type= protein_coding
chr6	31727038	31729792	31727038	31729792	-	ENST00000375789.6@DDAH2	ENST00000375789.6	protein_coding	31728865,31728646,31728451,31728173,31727543,31727038	31729792,31728745,31728524,31728292,31727692,31727353	Gene ID= ENSG00000213722.8 TPM= 69.82 Transcript Type= protein_coding
chr6	31727038	31730262	31727038	31730262	-	ENST00000483792.1@DDAH2	ENST00000483792.1	protein_coding	31730051,31728646,31728173,31727543,31727038	31730262,31728745,31728292,31727692,31727353	Gene ID= ENSG00000213722.8 TPM= 3.01 Transcript Type= processed_transcript
chr6	31727038	31730227	31727038	31730227	-	ENST00000480913.5@DDAH2	ENST00000480913.5	protein_coding	31730051,31728646,31728451,31728173,31727543,31727038	31730227,31728745,31728524,31728292,31727692,31727353	Gene ID= ENSG00000213722.8 TPM= 4.52 Transcript Type= processed_transcript
chr6	31730581	31736572	31730581	31736572	-	ENST00000375779.6@CLIC1	ENST00000375779.6	protein_coding	31736545,31736262,31734154,31733836,31733566,31732217,31730581	31736572,31736412,31734263,31733961,31733672,31732398,31731003	Gene ID= ENSG00000213719.8 TPM= 4.07 Transcript Type= protein_coding
chr6	31730581	31736567	31730581	31736567	-	ENST00000375784.7@CLIC1	ENST00000375784.7	protein_coding	31736262,31734154,31733836,31733566,31732217,31730581	31736567,31734263,31733961,31733672,31732398,31731003	Gene ID= ENSG00000213719.8 TPM= 130.47 Transcript Type= protein_coding
chr6	31730583	31736545	31730583	31736545	-	ENST00000616760.1@CLIC1	ENST00000616760.1	protein_coding	31736483,31736262,31734154,31733836,31733566,31732217,31730583	31736545,31736350,31734263,31733961,31733672,31732398,31731003	Gene ID= ENSG00000213719.8 TPM= 76.83 Transcript Type= protein_coding
chr6	31764149	31765086	31764149	31765086	-	transcript1226.chr6.nnic@NA	transcript1226.chr6.nnic	NA	31764149	31765086	Gene ID= novel_gene_chr6_1227 TPM= 4.25 Transcript Type= NA
chr6	31777518	31795953	31777518	31795953	-	ENST00000375663.7@VARS	ENST00000375663.7	protein_coding	31795546,31794831,31792986,31792757,31792392,31792217,31791871,31791610,31785569,31785246,31784595,31784394,31784214,31783096,31782721,31782530,31782285,31782087,31781847,31781691,31781481,31781019,31780870,31780705,31780441,31779998,31779608,31779425,31778967,31777518	31795953,31795250,31793120,31792895,31792516,31792301,31791971,31791737,31785733,31785327,31784714,31784502,31784308,31783186,31782845,31782633,31782443,31782177,31781952,31781761,31781606,31781123,31780938,31780783,31780568,31780153,31779814,31779536,31779292,31777662	Gene ID= ENSG00000204394.12 TPM= 42.67 Transcript Type= protein_coding
chr6	31777518	31795719	31777518	31795719	-	transcript1218.chr6.nic@VARS	transcript1218.chr6.nic	protein_coding	31794831,31792986,31792757,31792392,31792217,31791871,31791610,31785569,31785246,31784595,31784394,31784214,31783096,31782721,31782530,31782285,31782087,31781847,31781691,31781481,31781019,31780870,31780705,31780441,31779998,31779608,31779425,31778967,31777518	31795719,31793120,31792895,31792516,31792301,31791971,31791737,31785733,31785327,31784714,31784502,31784308,31783186,31782845,31782633,31782443,31782177,31781952,31781761,31781606,31781123,31780938,31780783,31780568,31780153,31779814,31779536,31779292,31777662	Gene ID= ENSG00000204394.12 TPM= 27.8 Transcript Type= NA
chr6	31777518	31795719	31777518	31795719	-	transcript1220.chr6.nnic@VARS	transcript1220.chr6.nnic	protein_coding	31794831,31792986,31792757,31792392,31792217,31791871,31791610,31785569,31785246,31784595,31784394,31783096,31782721,31782530,31782285,31782087,31781847,31781691,31781019,31780870,31780705,31780441,31779998,31779608,31779425,31778967,31777518	31795719,31793120,31792895,31792516,31792301,31791971,31791737,31785733,31785327,31784714,31784502,31783186,31782845,31782633,31782443,31782177,31781952,31781761,31781123,31780938,31780783,31780568,31780153,31779814,31779536,31779292,31777662	Gene ID= ENSG00000204394.12 TPM= 6.02 Transcript Type= NA
chr6	31797396	31806984	31797396	31806984	-	ENST00000375661.5@LSM2	ENST00000375661.5	protein_coding	31806755,31806075,31798477,31797990,31797396	31806984,31806142,31798507,31798049,31797882	Gene ID= ENSG00000204392.10 TPM= 18.59 Transcript Type= protein_coding
chr6	31797396	31806852	31797396	31806852	-	ENST00000470086.5@LSM2	ENST00000470086.5	protein_coding	31806755,31806075,31797990,31797396	31806852,31806142,31798049,31797882	Gene ID= ENSG00000204392.10 TPM= 1.59 Transcript Type= processed_transcript
chr6	31815464	31817946	31815464	31817946	+	ENST00000375651.6@HSPA1A	ENST00000375651.6	protein_coding	31815464	31817946	Gene ID= ENSG00000204389.9 TPM= 295.28 Transcript Type= protein_coding
chr6	31827735	31830255	31827735	31830255	+	ENST00000375650.4@HSPA1B	ENST00000375650.4	protein_coding	31827735	31830255	Gene ID= ENSG00000204388.6 TPM= 99.84 Transcript Type= protein_coding
chr6	31834608	31839761	31834608	31839761	+	ENST00000375640.7@C6orf48	ENST00000375640.7	protein_coding	31834608,31835411,31837236,31839543	31835200,31835451,31837435,31839761	Gene ID= ENSG00000204387.12 TPM= 11.68 Transcript Type= protein_coding
chr6	31834908	31839761	31834908	31839761	+	ENST00000375635.6@C6orf48	ENST00000375635.6	protein_coding	31834908,31835411,31837236,31839543	31835057,31835451,31837435,31839761	Gene ID= ENSG00000204387.12 TPM= 3.19 Transcript Type= protein_coding
chr6	31834908	31839761	31834908	31839761	+	ENST00000375638.7@C6orf48	ENST00000375638.7	protein_coding	31834908,31835411,31836424,31837236,31839543	31835200,31835451,31836517,31837435,31839761	Gene ID= ENSG00000204387.12 TPM= 4.25 Transcript Type= protein_coding
chr6	31859052	31862906	31859052	31862906	-	ENST00000375631.4@NEU1	ENST00000375631.4	protein_coding	31862618,31861999,31861188,31860439,31860042,31859052	31862906,31862191,31861450,31860621,31860264,31859945	Gene ID= ENSG00000204386.10 TPM= 3.19 Transcript Type= protein_coding
chr6	31879759	31886437	31879759	31886437	-	ENST00000494816.5@EHMT2	ENST00000494816.5	protein_coding	31884912,31884645,31884392,31883806,31883362,31882894,31882699,31881014,31880673,31879759	31886437,31884799,31884559,31883950,31883439,31883009,31882785,31881092,31880848,31880264	Gene ID= ENSG00000204371.11 TPM= 2.84 Transcript Type= retained_intron
chr6	31889532	31897698	31889532	31897698	-	transcript1250.chr6.nic@EHMT2	transcript1250.chr6.nic	protein_coding	31897636,31896923,31896606,31896263,31892826,31892694,31892407,31889532	31897698,31896989,31896824,31896516,31892910,31892734,31892562,31889602	Gene ID= ENSG00000204371.11 TPM= 3.19 Transcript Type= NA
chr6	31879759	31897684	31879759	31897684	-	ENST00000375537.8@EHMT2	ENST00000375537.8	protein_coding	31897636,31896923,31896606,31896263,31892826,31892694,31892407,31889468,31889228,31888969,31888599,31888363,31888041,31887779,31887577,31886995,31886775,31886581,31884912,31884645,31884392,31883806,31883362,31882894,31882699,31881014,31880673,31879759	31897684,31896989,31896824,31896516,31892910,31892734,31892562,31889602,31889342,31889070,31888747,31888506,31888276,31887961,31887659,31887101,31886897,31886682,31885016,31884799,31884559,31883950,31883439,31883009,31882785,31881092,31880848,31880264	Gene ID= ENSG00000204371.11 TPM= 9.74 Transcript Type= protein_coding
chr6	31879759	31897677	31879759	31897677	-	ENST00000375530.8@EHMT2	ENST00000375530.8	protein_coding	31897636,31896923,31896606,31896263,31892826,31892694,31892407,31889468,31889228,31888599,31888363,31888041,31887779,31887577,31886995,31886775,31886581,31884912,31884645,31884392,31883806,31883362,31882894,31882699,31881014,31880673,31879759	31897677,31896989,31896824,31896516,31892910,31892734,31892562,31889602,31889342,31888747,31888506,31888276,31887961,31887659,31887101,31886897,31886682,31885016,31884799,31884559,31883950,31883439,31883009,31882785,31881092,31880848,31880264	Gene ID= ENSG00000204371.11 TPM= 6.55 Transcript Type= protein_coding
chr6	31895401	31897687	31895401	31897687	-	ENST00000465429.1@EHMT2	ENST00000465429.1	protein_coding	31897636,31896923,31896606,31895401	31897687,31896989,31896824,31896516	Gene ID= ENSG00000204371.11 TPM= 2.12 Transcript Type= retained_intron
chr6	31927477	31945672	31927477	31945672	+	ENST00000299367.9@C2	ENST00000299367.9	protein_coding	31927477,31927955,31928732,31933610,31933867,31934166,31935923,31937319,31939231,31942959,31943225,31943416,31943644,31943917,31944135,31944727,31944980,31945178	31927798,31928164,31928917,31933783,31933965,31934299,31936061,31937459,31939320,31943099,31943319,31943527,31943809,31943993,31944226,31944853,31945029,31945672	Gene ID= ENSG00000166278.14 TPM= 1.06 Transcript Type= protein_coding
chr6	31927496	31945671	31927496	31945671	+	ENST00000442278.6@C2	ENST00000442278.6	protein_coding	31927496,31933610,31933867,31934166,31935923,31937319,31939231,31942959,31943225,31943416,31943644,31943917,31944135,31944727,31944980,31945178	31927798,31933783,31933965,31934299,31936061,31937459,31939320,31943099,31943319,31943527,31943809,31943993,31944226,31944853,31945029,31945671	Gene ID= ENSG00000166278.14 TPM= 1.06 Transcript Type= protein_coding
chr6	31927739	31945391	31927739	31945391	+	ENST00000482060.5@C2	ENST00000482060.5	protein_coding	31927739,31927955,31928732,31933610,31933867,31934166,31935923,31937319,31939231,31942959,31943225,31943416,31943644,31943917,31944135,31944727,31944980,31945178	31927798,31928192,31928917,31933783,31933965,31934299,31936061,31937459,31939320,31943099,31943319,31943527,31943809,31943993,31944226,31944853,31945029,31945391	Gene ID= ENSG00000166278.14 TPM= 1.06 Transcript Type= nonsense_mediated_decay
chr6	31945709	31952084	31945709	31952084	+	ENST00000425368.6@CFB	ENST00000425368.6	protein_coding	31945709,31946373,31947007,31947348,31947742,31947945,31948374,31948830,31949243,31949420,31950050,31950286,31950619,31950868,31951144,31951341,31951555,31951875	31946285,31946606,31947192,31947521,31947843,31948081,31948512,31948961,31949344,31949557,31950147,31950403,31950772,31950944,31951244,31951473,31951604,31952084	Gene ID= ENSG00000243649.8 TPM= 5.31 Transcript Type= protein_coding
chr6	31952087	31959110	31952087	31959110	-	ENST00000375429.7@NELFE	ENST00000375429.7	protein_coding	31958892,31958372,31956941,31956693,31955219,31955059,31954555,31954298,31954080,31953729,31952087	31959110,31958454,31957010,31956838,31955293,31955096,31954892,31954442,31954134,31953831,31952398	Gene ID= ENSG00000204356.13 TPM= 9.03 Transcript Type= protein_coding
chr6	31952228	31958962	31952228	31958962	-	ENST00000481121.5@NELFE	ENST00000481121.5	protein_coding	31958892,31958372,31956941,31956693,31955219,31955059,31954555,31954298,31953729,31952228	31958962,31958454,31957010,31956838,31955293,31955096,31954892,31954442,31954134,31952398	Gene ID= ENSG00000204356.13 TPM= 7.97 Transcript Type= retained_intron
chr6	31959080	31969755	31959080	31969755	+	ENST00000375394.6@SKIV2L	ENST00000375394.6	protein_coding	31959080,31959297,31960010,31960220,31960432,31960666,31961041,31961196,31961547,31961909,31962439,31962714,31962985,31963413,31963637,31963913,31964232,31965783,31966709,31967004,31967273,31967715,31967956,31968328,31968686,31968871,31969280,31969515	31959214,31959400,31960119,31960337,31960546,31960740,31961094,31961386,31961675,31962054,31962585,31962798,31963091,31963559,31963733,31964125,31964342,31966013,31966846,31967141,31967377,31967862,31968082,31968538,31968796,31969089,31969420,31969755	Gene ID= ENSG00000204351.11 TPM= 26.55 Transcript Type= protein_coding
chr6	31968475	31969751	31968475	31969751	+	ENST00000491994.1@SKIV2L	ENST00000491994.1	protein_coding	31968475,31968686,31968871,31969280	31968538,31968796,31969089,31969751	Gene ID= ENSG00000204351.11 TPM= 3.19 Transcript Type= protein_coding
chr6	31969815	31972128	31969815	31972128	-	transcript1279.chr6.nic@DXO	transcript1279.chr6.nic	protein_coding	31971929,31971320,31970912,31970606,31970343,31970109,31969815	31972128,31971681,31971147,31970752,31970478,31970203,31970024	Gene ID= ENSG00000204348.9 TPM= 3.19 Transcript Type= NA
chr6	31969810	31972292	31969810	31972292	-	ENST00000337523.9@DXO	ENST00000337523.9	protein_coding	31971929,31971320,31970912,31970606,31970343,31970109,31969810	31972292,31971681,31971147,31970825,31970478,31970203,31970024	Gene ID= ENSG00000204348.9 TPM= 13.81 Transcript Type= protein_coding
chr6	31969813	31972290	31969813	31972290	-	ENST00000375349.7@DXO	ENST00000375349.7	protein_coding	31971929,31971320,31970912,31970606,31970343,31970109,31969813	31972290,31971725,31971147,31970825,31970478,31970203,31970024	Gene ID= ENSG00000204348.9 TPM= 1.06 Transcript Type= protein_coding
chr6	31969815	31972243	31969815	31972243	-	transcript1286.chr6.nic@DXO	transcript1286.chr6.nic	protein_coding	31971320,31970912,31970606,31970343,31970109,31969815	31972243,31971147,31970752,31970478,31970203,31970024	Gene ID= ENSG00000204348.9 TPM= 2.12 Transcript Type= NA
chr6	31969817	31972238	31969817	31972238	-	ENST00000478221.5@DXO	ENST00000478221.5	protein_coding	31971929,31970912,31970606,31970343,31970109,31969817	31972238,31971147,31970752,31970478,31970203,31970024	Gene ID= ENSG00000204348.9 TPM= 2.12 Transcript Type= processed_transcript
chr6	31969813	31981446	31969813	31981446	+	transcript1276.chr6.nic@STK19	transcript1276.chr6.nic	protein_coding	31969813,31972621,31978903,31979414,31980451,31980654,31981004	31972511,31972757,31978998,31979553,31980548,31980801,31981446	Gene ID= ENSG00000204344.14 TPM= 9.56 Transcript Type= NA
chr6	31972555	31981446	31972555	31981446	+	ENST00000491861.5@STK19	ENST00000491861.5	protein_coding	31972555,31978903,31979414,31980451,31980654,31981004	31972757,31978998,31979553,31980548,31980801,31981446	Gene ID= ENSG00000204344.14 TPM= 1.06 Transcript Type= retained_intron
chr6	31972381	31981429	31972381	31981429	+	ENST00000483801.5@STK19	ENST00000483801.5	protein_coding	31972381,31978903,31979414,31980451,31980654,31981004	31972511,31978998,31979553,31980548,31980801,31981429	Gene ID= ENSG00000204344.14 TPM= 1.06 Transcript Type= nonsense_mediated_decay
chr6	31982024	32002681	31982024	32002681	+	ENST00000428956.6@C4A	ENST00000428956.6	protein_coding	31982024,31982305,31982718,31983129,31983278,31983585,31983838,31984073,31984276,31991192,31991407,31991732,31992047,31992386,31992796,31993090,31993425,31993714,31993916,31994245,31994498,31994952,31995105,31995330,31995719,31995955,31996207,31996429,31996829,31997144,31997705,31998814,31999005,31999306,31999487,32001053,32001321,32001496,32001777,32002123,32002399	31982172,31982503,31982919,31983199,31983366,31983667,31983934,31984178,31984408,31991307,31991586,31991914,31992232,31992544,31992922,31993164,31993622,31993825,31993986,31994384,31994707,31995003,31995194,31995539,31995794,31996111,31996323,31996600,31997061,31997311,31997764,31998907,31999191,31999396,31999561,32001155,32001410,32001594,32001860,32002255,32002681	Gene ID= ENSG00000244731.7 TPM= 106.22 Transcript Type= protein_coding
chr6	32014762	32035418	32014762	32035418	+	ENST00000435363.6@C4B	ENST00000435363.6	protein_coding	32014762,32015043,32015456,32015867,32016016,32016323,32016576,32016811,32017014,32023930,32024145,32024470,32024785,32025124,32025534,32025828,32026163,32026452,32026654,32026983,32027236,32027690,32027843,32028068,32028457,32028693,32028945,32029167,32029566,32029881,32030442,32031551,32031742,32032043,32032224,32033790,32034058,32034233,32034514,32034860,32035136	32014910,32015241,32015657,32015937,32016104,32016405,32016672,32016916,32017146,32024045,32024324,32024652,32024970,32025282,32025660,32025902,32026360,32026563,32026724,32027122,32027445,32027741,32027932,32028277,32028532,32028849,32029061,32029338,32029798,32030048,32030501,32031644,32031928,32032133,32032298,32033892,32034147,32034331,32034597,32034992,32035418	Gene ID= ENSG00000224389.8 TPM= 49.92 Transcript Type= protein_coding
chr6	32034804	32037613	32034804	32037613	+	transcript1299.chr6.nnic@NA	transcript1299.chr6.nnic	NA	32034804	32037613	Gene ID= novel_gene_chr6_1300 TPM= 3.19 Transcript Type= NA
chr6	32093214	32109313	32093214	32109313	-	ENST00000479795.1@TNXB	ENST00000479795.1	protein_coding	32109181,32097796,32095611,32095076,32093214	32109313,32098206,32097449,32095191,32093456	Gene ID= ENSG00000168477.17 TPM= 2.12 Transcript Type= protein_coding
chr6	32041154	32109374	32041154	32109374	-	ENST00000375244.7@TNXB	ENST00000375244.7	protein_coding	32109181,32097796,32095611,32095076,32089223,32088785,32085750,32084413,32082036,32081368,32079033,32073647,32071990,32070127,32069553,32068822,32068390,32067661,32064821,32062157,32061397,32058058,32056586,32055851,32053388,32052670,32049998,32049270,32048363,32047734,32046175,32045006,32044381,32044007,32043749,32043437,32043175,32042951,32042699,32042455,32042266,32042012,32041771,32041154	32109374,32098206,32097449,32095191,32089379,32089048,32086118,32084709,32082326,32081673,32079365,32073952,32072298,32070414,32069861,32069136,32068707,32067984,32065117,32062483,32061720,32058390,32056903,32056174,32053711,32052993,32050321,32049587,32048650,32048012,32046456,32045326,32044716,32044129,32043892,32043556,32043318,32043081,32042831,32042606,32042362,32042173,32041934,32041450	Gene ID= ENSG00000168477.17 TPM= 54.17 Transcript Type= protein_coding
chr6	32115264	32128240	32115264	32128240	-	ENST00000375203.7@ATF6B	ENST00000375203.7	protein_coding	32128117,32127671,32127442,32127103,32126117,32121263,32120989,32120771,32119824,32118956,32118775,32117859,32117587,32117323,32117037,32116704,32116480,32115264	32128240,32127750,32127520,32127194,32126252,32121348,32121124,32120902,32119957,32119141,32118866,32118038,32117694,32117404,32117107,32116815,32116564,32115968	Gene ID= ENSG00000213676.10 TPM= 4.25 Transcript Type= protein_coding
chr6	32120442	32128237	32120442	32128237	-	transcript1315.chr6.nic@ATF6B	transcript1315.chr6.nic	protein_coding	32128117,32127671,32127442,32127103,32126117,32120442	32128237,32127750,32127520,32127194,32126252,32121348	Gene ID= ENSG00000213676.10 TPM= 2.12 Transcript Type= NA
chr6	32120442	32128222	32120442	32128222	-	ENST00000495579.5@ATF6B	ENST00000495579.5	protein_coding	32128117,32127671,32127442,32127103,32126117,32121263,32120989,32120442	32128222,32127750,32127520,32127194,32126252,32121348,32121124,32120902	Gene ID= ENSG00000213676.10 TPM= 8.5 Transcript Type= retained_intron
chr6	32152802	32154333	32152802	32154333	-	ENST00000485392.5@PRRT1	ENST00000485392.5	protein_coding	32154238,32153737,32152802	32154333,32153836,32153172	Gene ID= ENSG00000204314.10 TPM= 1.06 Transcript Type= processed_transcript
chr6	32153523	32163678	32153523	32163678	+	ENST00000361568.6@PPT2	ENST00000361568.6	protein_coding	32153523,32154587,32155030,32155688,32155871,32157637,32157840,32162568,32162807	32153636,32154777,32155183,32155783,32155978,32157720,32157924,32162622,32163678	Gene ID= ENSG00000221988.12 TPM= 3.19 Transcript Type= protein_coding
chr6	32154095	32163678	32154095	32163678	+	ENST00000375137.6@PPT2	ENST00000375137.6	protein_coding	32154095,32154587,32155030,32155688,32155871,32157637,32157840,32162568,32162807	32154394,32154777,32155183,32155783,32155978,32157720,32157924,32162622,32163678	Gene ID= ENSG00000221988.12 TPM= 3.19 Transcript Type= protein_coding
chr6	32165236	32168281	32165236	32168281	+	ENST00000466239.5@EGFL8	ENST00000466239.5	protein_coding	32165236,32166701,32166910,32167087,32167350,32167910	32166620,32166810,32167005,32167257,32167656,32168281	Gene ID= ENSG00000241404.6 TPM= 1.06 Transcript Type= retained_intron
chr6	32164583	32168281	32164583	32168281	+	ENST00000333845.10@EGFL8	ENST00000333845.10	protein_coding	32164583,32166138,32166498,32166701,32166910,32167087,32167350,32167503,32167910	32164657,32166266,32166620,32166810,32167005,32167257,32167429,32167656,32168281	Gene ID= ENSG00000241404.6 TPM= 2.66 Transcript Type= protein_coding
chr6	32164605	32168281	32164605	32168281	+	ENST00000395512.5@EGFL8	ENST00000395512.5	protein_coding	32164605,32166138,32166498,32166701,32166910,32167087,32167350,32167503,32167910	32164681,32166266,32166620,32166810,32167005,32167257,32167429,32167656,32168281	Gene ID= ENSG00000241404.6 TPM= 1.59 Transcript Type= protein_coding
chr6	32168212	32177080	32168212	32177080	-	ENST00000395499.5@AGPAT1	ENST00000395499.5	protein_coding	32176510,32171297,32170937,32170425,32170165,32169966,32168212	32177080,32171505,32171070,32170600,32170260,32170038,32169448	Gene ID= ENSG00000204310.12 TPM= 15.22 Transcript Type= protein_coding
chr6	32168212	32176122	32168212	32176122	-	ENST00000375107.7@AGPAT1	ENST00000375107.7	protein_coding	32175814,32171297,32170937,32170425,32170165,32169966,32168212	32176122,32171505,32171070,32170600,32170260,32170038,32169448	Gene ID= ENSG00000204310.12 TPM= 37.53 Transcript Type= protein_coding
chr6	32168212	32177325	32168212	32177325	-	ENST00000375104.6@AGPAT1	ENST00000375104.6	protein_coding	32177234,32171297,32170937,32170425,32170165,32169966,32168212	32177325,32171505,32171070,32170600,32170260,32170038,32169448	Gene ID= ENSG00000204310.12 TPM= 10.97 Transcript Type= protein_coding
chr6	32170316	32170475	32170316	32170475	-	transcript1336.chr6.nnic@NA	transcript1336.chr6.nnic	NA	32170316	32170475	Gene ID= novel_gene_chr6_1337 TPM= 2.12 Transcript Type= NA
chr6	32178354	32180793	32178354	32180793	+	ENST00000375094.3@RNF5	ENST00000375094.3	protein_coding	32178354,32179541,32179651,32179877,32180009,32180229	32178651,32179559,32179763,32179931,32180126,32180793	Gene ID= ENSG00000204308.7 TPM= 172.07 Transcript Type= protein_coding
chr6	32190766	32192906	32190766	32192906	-	ENST00000375040.7@GPSM3	ENST00000375040.7	protein_coding	32192472,32192148,32191709,32190766	32192906,32192250,32191908,32191503	Gene ID= ENSG00000213654.9 TPM= 7.44 Transcript Type= protein_coding
chr6	32194843	32224067	32194843	32224067	-	ENST00000375023.3@NOTCH4	ENST00000375023.3	protein_coding	32223856,32223005,32222511,32220978,32220756,32220405,32220129,32219592,32217995,32217153,32216945,32215226,32214110,32213688,32213135,32212824,32212474,32210752,32204137,32203770,32202076,32201117,32200831,32198926,32198649,32198421,32197299,32196925,32196324,32194843	32224067,32223086,32222806,32221325,32220878,32220641,32220284,32219786,32218108,32217266,32217067,32215385,32214255,32213840,32213252,32212911,32212627,32210936,32204389,32203882,32202599,32201500,32201006,32199145,32198730,32198559,32197594,32197072,32196421,32196150	Gene ID= ENSG00000204301.6 TPM= 32.93 Transcript Type= protein_coding
chr6	32215860	32224057	32215860	32224057	-	ENST00000473562.1@NOTCH4	ENST00000473562.1	protein_coding	32223856,32223005,32222511,32220978,32220756,32220405,32220129,32219592,32217995,32217153,32215860	32224057,32223086,32222806,32221325,32220878,32220641,32220284,32219786,32218108,32217266,32217067	Gene ID= ENSG00000204301.6 TPM= 7.44 Transcript Type= retained_intron
chr6	32439842	32445046	32439842	32445046	+	ENST00000395388.6@HLA-DRA	ENST00000395388.6	protein_coding	32439842,32442448,32443185,32443756,32444652	32440032,32442693,32443466,32443921,32445046	Gene ID= ENSG00000204287.13 TPM= 28.68 Transcript Type= protein_coding
chr6	32552722	32589793	32552722	32589793	-	transcript1366.chr6.nnic@HLA-DRB6	transcript1366.chr6.nnic	transcribed_unprocessed_pseudogene	32589643,32584109,32581594,32554690,32553856,32553376,32552722	32589793,32584378,32581838,32554726,32553966,32553399,32553059	Gene ID= ENSG00000229391.7 TPM= 11.68 Transcript Type= NA
chr6	32578769	32589848	32578769	32589848	-	ENST00000360004.5@HLA-DRB1	ENST00000360004.5	protein_coding	32589643,32584109,32581557,32580746,32580247,32578769	32589848,32584378,32581838,32580856,32580270,32579104	Gene ID= ENSG00000196126.11 TPM= 96.66 Transcript Type= protein_coding
chr6	32637403	32746887	32637403	32746887	+	transcript1372.chr6.nnic@HLA-DQA2	transcript1372.chr6.nnic	protein_coding	32637403,32641310,32745791,32746240,32746791	32637540,32641558,32746072,32746414,32746887	Gene ID= ENSG00000237541.3 TPM= 5.31 Transcript Type= NA
chr6	32659467	32666694	32659467	32666694	-	ENST00000434651.6@HLA-DQB1	ENST00000434651.6	protein_coding	32666499,32664798,32661967,32661347,32659467	32666694,32665067,32662248,32661457,32660249	Gene ID= ENSG00000179344.16 TPM= 1.06 Transcript Type= protein_coding
chr6	32821833	32838727	32821833	32838727	-	ENST00000374899.8@TAP2	ENST00000374899.8	protein_coding	32838653,32837741,32837537,32835643,32835154,32832627,32832333,32830618,32830267,32829930,32829400,32821833	32838727,32838237,32837651,32835773,32835359,32832824,32832461,32830806,32830440,32830089,32829536,32822318	Gene ID= ENSG00000204267.13 TPM= 3.19 Transcript Type= protein_coding
chr6	32840717	32844047	32840717	32844047	-	ENST00000374882.7@PSMB8	ENST00000374882.7	protein_coding	32843850,32842942,32842672,32842134,32841531,32840717	32844047,32843089,32842783,32842263,32841735,32841047	Gene ID= ENSG00000204264.8 TPM= 53.11 Transcript Type= protein_coding
chr6	32840720	32842443	32840720	32842443	-	transcript1383.chr6.nnic@NA	transcript1383.chr6.nnic	NA	32840720	32842443	Gene ID= novel_gene_chr6_1384 TPM= 2.12 Transcript Type= NA
chr6	32844133	32846210	32844133	32846210	+	ENST00000429600.1@PSMB8-AS1	ENST00000429600.1	lincRNA	32844133,32844810,32845418	32844274,32844870,32846210	Gene ID= ENSG00000204261.8 TPM= 1.06 Transcript Type= lincRNA
chr6	32845209	32853978	32845209	32853978	-	ENST00000354258.4@TAP1	ENST00000354258.4	protein_coding	32853039,32852388,32852109,32850944,32850320,32848990,32848652,32847919,32847513,32847068,32845209	32853978,32852502,32852239,32851149,32850517,32849118,32848840,32848092,32847675,32847204,32845785	Gene ID= ENSG00000168394.10 TPM= 53.11 Transcript Type= protein_coding
chr6	32854161	32859585	32854161	32859585	+	ENST00000374859.2@PSMB9	ENST00000374859.2	protein_coding	32854161,32856138,32857263,32858005,32858364,32859405	32854289,32856205,32857394,32858134,32858505,32859585	Gene ID= ENSG00000240065.7 TPM= 22.31 Transcript Type= protein_coding
chr6	32934629	32941070	32934629	32941070	-	ENST00000418107.2@HLA-DMB	ENST00000418107.2	protein_coding	32940753,32938684,32937172,32935536,32935342,32934629	32941070,32938965,32937456,32935652,32935377,32934987	Gene ID= ENSG00000242574.8 TPM= 6.37 Transcript Type= protein_coding
chr6	32934629	32936901	32934629	32936901	-	ENST00000477537.1@HLA-DMB	ENST00000477537.1	protein_coding	32935342,32934629	32936901,32934987	Gene ID= ENSG00000242574.8 TPM= 1.06 Transcript Type= retained_intron
chr6	32948613	32953122	32948613	32953122	-	ENST00000374843.8@HLA-DMA	ENST00000374843.8	protein_coding	32952949,32950519,32949611,32949271,32948613	32953122,32950803,32949889,32949399,32948868	Gene ID= ENSG00000204257.14 TPM= 11.68 Transcript Type= protein_coding
chr6	32968594	32978197	32968594	32978197	+	transcript1401.chr6.nic@BRD2	transcript1401.chr6.nic	protein_coding	32968594,32971595,32974462,32975384,32976031,32976250,32976562,32977442,32977757,32978126	32969056,32972927,32974765,32975521,32976169,32976464,32976936,32977570,32978005,32978197	Gene ID= ENSG00000204256.12 TPM= 9.56 Transcript Type= NA
chr6	32970888	32981505	32970888	32981505	+	ENST00000374831.8@BRD2	ENST00000374831.8	protein_coding	32970888,32971595,32974462,32975384,32976031,32976250,32976562,32977442,32977757,32978126,32979828,32980342,32980582	32971197,32972927,32974765,32975521,32976169,32976464,32976936,32977570,32978005,32978388,32980132,32980464,32981505	Gene ID= ENSG00000204256.12 TPM= 2.12 Transcript Type= protein_coding
chr6	32972217	32978203	32972217	32978203	+	ENST00000607833.5@BRD2	ENST00000607833.5	protein_coding	32972217,32974462,32975384,32976031,32976250,32976562,32977442,32977757,32978126	32972927,32974765,32975521,32976169,32976464,32976936,32977570,32978005,32978203	Gene ID= ENSG00000204256.12 TPM= 20.18 Transcript Type= protein_coding
chr6	32978330	32981288	32978330	32981288	+	transcript1403.chr6.nnic@NA	transcript1403.chr6.nnic	NA	32978330	32981288	Gene ID= novel_gene_chr6_1404 TPM= 2.12 Transcript Type= NA
chr6	33004178	33009612	33004178	33009612	-	ENST00000229829.6@HLA-DOA	ENST00000229829.6	protein_coding	33009455,33008013,33007311,33007080,33004178	33009612,33008261,33007592,33007215,33006841	Gene ID= ENSG00000204252.13 TPM= 1.06 Transcript Type= protein_coding
chr6	33064569	33080710	33064569	33080710	-	ENST00000419277.5@HLA-DPA1	ENST00000419277.5	protein_coding	33080680,33073471,33069641,33069019,33068638,33064569	33080710,33073669,33069886,33069300,33068804,33065347	Gene ID= ENSG00000231389.7 TPM= 19.12 Transcript Type= protein_coding
chr6	33075926	33087201	33075926	33087201	+	ENST00000418931.6@HLA-DPB1	ENST00000418931.6	protein_coding	33075926,33080672,33084950,33085779,33086219,33086539	33076141,33080935,33085231,33085889,33086242,33087201	Gene ID= ENSG00000223865.10 TPM= 19.12 Transcript Type= protein_coding
chr6	33080367	33086769	33080367	33086769	+	transcript1410.chr6.nic@HLA-DPB1	transcript1410.chr6.nic	protein_coding	33080367,33080672,33084950,33085779,33086219,33086539	33080534,33080935,33085231,33085889,33086242,33086769	Gene ID= ENSG00000223865.10 TPM= 4.25 Transcript Type= NA
chr6	33080431	33086769	33080431	33086769	+	transcript1412.chr6.nic@HLA-DPB1	transcript1412.chr6.nic	protein_coding	33080431,33084950,33085779,33086219,33086539	33080935,33085231,33085889,33086242,33086769	Gene ID= ENSG00000223865.10 TPM= 2.12 Transcript Type= NA
chr6	33193588	33200688	33193588	33200688	-	ENST00000374680.3@RXRB	ENST00000374680.3	protein_coding	33200242,33199169,33198308,33197762,33196434,33195907,33195570,33195363,33194945,33193588	33200688,33199416,33198464,33197941,33196606,33196036,33195702,33195454,33195050,33194829	Gene ID= ENSG00000204231.10 TPM= 24.43 Transcript Type= protein_coding
chr6	33200826	33204439	33200826	33204439	+	ENST00000374675.7@SLC39A7	ENST00000374675.7	protein_coding	33200826,33201242,33201745,33202072,33202263,33202560,33202910,33203541	33200938,33201656,33201913,33202125,33202427,33202700,33203106,33204439	Gene ID= ENSG00000112473.17 TPM= 9.03 Transcript Type= protein_coding
chr6	33200873	33204439	33200873	33204439	+	ENST00000374677.7@SLC39A7	ENST00000374677.7	protein_coding	33200873,33201745,33202072,33202263,33202560,33202910,33203541	33201656,33201913,33202125,33202427,33202700,33203106,33204439	Gene ID= ENSG00000112473.17 TPM= 6.9 Transcript Type= protein_coding
chr6	33204642	33206831	33204642	33206831	+	ENST00000374662.3@HSD17B8	ENST00000374662.3	protein_coding	33204642,33204902,33205221,33205447,33205640,33205828,33206134,33206375,33206638	33204720,33205119,33205337,33205539,33205725,33205912,33206176,33206449,33206831	Gene ID= ENSG00000204228.3 TPM= 12.75 Transcript Type= protein_coding
chr6	33208495	33212722	33208495	33212722	+	ENST00000374656.4@RING1	ENST00000374656.4	protein_coding	33208495,33208765,33209626,33209915,33211158,33211729,33212298	33208644,33208900,33209786,33210130,33211547,33212002,33212722	Gene ID= ENSG00000204227.4 TPM= 8.5 Transcript Type= protein_coding
chr6	33250272	33271995	33250272	33271995	-	transcript1440.chr6.nic@VPS52	transcript1440.chr6.nic	protein_coding	33271905,33270199,33269744,33269490,33269014,33268499,33268108,33267865,33267682,33267188,33266557,33264782,33264374,33264008,33263772,33263484,33251860,33251518,33250272	33271995,33270283,33269819,33269557,33269189,33268649,33268208,33267997,33267739,33267321,33266712,33264900,33264497,33264103,33263879,33263549,33251971,33251636,33250987	Gene ID= ENSG00000223501.8 TPM= 7.97 Transcript Type= NA
chr6	33250272	33271894	33250272	33271894	-	ENST00000445902.2@VPS52	ENST00000445902.2	protein_coding	33271586,33270199,33269999,33269744,33269490,33269014,33268499,33268108,33267865,33267682,33267188,33266557,33264782,33264374,33264008,33263772,33263484,33251860,33251518,33250272	33271894,33270283,33270051,33269819,33269557,33269189,33268649,33268208,33267997,33267739,33267321,33266712,33264900,33264497,33264103,33263879,33263549,33251971,33251636,33250987	Gene ID= ENSG00000223501.8 TPM= 23.9 Transcript Type= protein_coding
chr6	33272010	33276510	33272010	33276510	+	ENST00000439602.6@RPS18	ENST00000439602.6	protein_coding	33272010,33272628,33275797,33275965,33276176,33276391	33272122,33272726,33275883,33276066,33276267,33276510	Gene ID= ENSG00000231500.6 TPM= 350.51 Transcript Type= protein_coding
chr6	33277132	33278825	33277132	33278825	+	ENST00000451237.2@B3GALT4	ENST00000451237.2	protein_coding	33277132	33278825	Gene ID= ENSG00000235863.3 TPM= 32.93 Transcript Type= protein_coding
chr6	33279108	33289527	33279108	33289527	-	ENST00000374617.8@WDR46	ENST00000374617.8	protein_coding	33289102,33288804,33288614,33288358,33288148,33287965,33287614,33287355,33287091,33286795,33280674,33280428,33279764,33279497,33279108	33289527,33289013,33288694,33288470,33288235,33288026,33287718,33287505,33287226,33286894,33280987,33280522,33279859,33279610,33279374	Gene ID= ENSG00000227057.9 TPM= 26.55 Transcript Type= protein_coding
chr6	33289302	33290933	33289302	33290933	+	ENST00000395131.5@PFDN6	ENST00000395131.5	protein_coding	33289302,33289770,33290174,33290326,33290716	33289620,33289920,33290244,33290450,33290933	Gene ID= ENSG00000204220.11 TPM= 2.12 Transcript Type= protein_coding
chr6	33291654	33299324	33291654	33299324	-	ENST00000497454.5@RGL2	ENST00000497454.5	protein_coding	33298870,33298455,33297032,33296598,33296414,33296028,33295508,33295319,33295127,33294977,33294688,33294034,33293795,33293604,33293413,33293016,33292430,33291654	33299324,33298651,33297115,33296776,33296464,33296325,33295759,33295422,33295211,33295045,33294762,33294066,33293916,33293699,33293524,33293306,33292544,33292313	Gene ID= ENSG00000237441.9 TPM= 65.5 Transcript Type= protein_coding
chr6	33291654	33298930	33291654	33298930	-	ENST00000437840.6@RGL2	ENST00000437840.6	protein_coding	33298870,33297032,33296598,33296414,33296028,33295508,33295319,33295127,33294977,33294688,33294034,33293795,33293604,33293413,33293016,33292430,33291654	33298930,33297115,33296776,33296464,33296325,33295759,33295422,33295211,33295045,33294762,33294066,33293916,33293699,33293524,33293306,33292544,33292313	Gene ID= ENSG00000237441.9 TPM= 24.08 Transcript Type= processed_transcript
chr6	33299694	33314387	33299694	33314387	-	ENST00000434618.6@TAPBP	ENST00000434618.6	protein_coding	33314005,33313694,33313217,33304989,33304297,33304128,33303955,33299694	33314387,33313864,33313477,33305387,33304638,33304217,33303989,33301771	Gene ID= ENSG00000231925.11 TPM= 329.27 Transcript Type= protein_coding
chr6	33314418	33317735	33314418	33317735	-	ENST00000431845.2@ZBTB22	ENST00000431845.2	protein_coding	33317653,33314418	33317735,33316985	Gene ID= ENSG00000236104.2 TPM= 56.29 Transcript Type= protein_coding
chr6	33318559	33322962	33318559	33322962	-	transcript1477.chr6.nnic@DAXX	transcript1477.chr6.nnic	protein_coding	33322862,33321719,33320736,33320380,33320011,33319380,33318997,33318559	33322962,33321908,33321567,33320591,33320224,33319854,33319219,33318802	Gene ID= ENSG00000204209.11 TPM= 7.08 Transcript Type= NA
chr6	33318558	33323010	33318558	33323010	-	ENST00000266000.10@DAXX	ENST00000266000.10	protein_coding	33322862,33321719,33320736,33320380,33320011,33319380,33318997,33318558	33323010,33321974,33321567,33320591,33320224,33319854,33319219,33318802	Gene ID= ENSG00000204209.11 TPM= 20.89 Transcript Type= protein_coding
chr6	33318558	33323014	33318558	33323014	-	ENST00000374542.9@DAXX	ENST00000374542.9	protein_coding	33322862,33321719,33320736,33320380,33320011,33319380,33318997,33318558	33323014,33321977,33321567,33320591,33320224,33319854,33319219,33318802	Gene ID= ENSG00000204209.11 TPM= 29.39 Transcript Type= protein_coding
chr6	33410961	33416453	33410961	33416453	+	ENST00000374516.7@PHF1	ENST00000374516.7	protein_coding	33410961,33412248,33412508,33412698,33413196,33413409,33413736,33414041,33414243,33414477,33414725,33414955,33415235,33415590,33415810	33411215,33412422,33412589,33412793,33413296,33413557,33413831,33414109,33414366,33414544,33414829,33415144,33415329,33415670,33416453	Gene ID= ENSG00000112511.17 TPM= 100.72 Transcript Type= protein_coding
chr6	33410961	33416453	33410961	33416453	+	ENST00000374512.7@PHF1	ENST00000374512.7	protein_coding	33410961,33412248,33412508,33412698,33413196,33413409,33413736,33414041,33414243,33414477,33414725,33414966,33415590,33415810	33411215,33412422,33412589,33412793,33413296,33413557,33413831,33414109,33414366,33414544,33414829,33415144,33415670,33416453	Gene ID= ENSG00000112511.17 TPM= 10.97 Transcript Type= protein_coding
chr6	33416442	33418317	33416442	33418317	-	ENST00000374500.9@CUTA	ENST00000374500.9	protein_coding	33418087,33417481,33417251,33417097,33416920,33416442	33418317,33417695,33417310,33417142,33416969,33416776	Gene ID= ENSG00000112514.15 TPM= 1.06 Transcript Type= protein_coding
chr6	33416550	33418142	33416550	33418142	-	ENST00000374484.8@CUTA	ENST00000374484.8	protein_coding	33418087,33417481,33417247,33417097,33416920,33416550	33418142,33417695,33417310,33417142,33416969,33416776	Gene ID= ENSG00000112514.15 TPM= 16.99 Transcript Type= nonsense_mediated_decay
chr6	33416543	33418122	33416543	33418122	-	ENST00000488034.5@CUTA	ENST00000488034.5	protein_coding	33417959,33417481,33417251,33417097,33416920,33416543	33418122,33417695,33417310,33417142,33416969,33416776	Gene ID= ENSG00000112514.15 TPM= 62.67 Transcript Type= protein_coding
chr6	33454579	33457548	33454579	33457548	+	ENST00000395064.2@ZBTB9	ENST00000395064.2	protein_coding	33454579,33455030	33454775,33457548	Gene ID= ENSG00000213588.5 TPM= 19.12 Transcript Type= protein_coding
chr6	33572552	33580305	33572552	33580305	-	transcript1519.chr6.nnic@BAK1	transcript1519.chr6.nnic	protein_coding	33580025,33577535,33575793,33575298,33574034,33572552	33580305,33577635,33575866,33575441,33574214,33573907	Gene ID= ENSG00000030110.12 TPM= 11.68 Transcript Type= NA
chr6	33572552	33580242	33572552	33580242	-	ENST00000374467.3@BAK1	ENST00000374467.3	protein_coding	33580025,33577535,33575793,33575298,33574034,33572552	33580242,33577635,33575928,33575441,33574214,33573907	Gene ID= ENSG00000030110.12 TPM= 55.23 Transcript Type= protein_coding
chr6	33691893	33696569	33691893	33696569	+	transcript1524.chr6.nic@ITPR3	transcript1524.chr6.nic	protein_coding	33691893,33693545,33694924,33695712	33692893,33693705,33695085,33696569	Gene ID= ENSG00000096433.10 TPM= 4.25 Transcript Type= NA
chr6	33696761	33711727	33696761	33711727	-	ENST00000607484.5@UQCC2	ENST00000607484.5	protein_coding	33711549,33701346,33700444,33696761	33711727,33701420,33700513,33697750	Gene ID= ENSG00000137288.9 TPM= 198.62 Transcript Type= protein_coding
chr6	33694296	33711727	33694296	33711727	-	transcript1527.chr6.nic@UQCC2	transcript1527.chr6.nic	protein_coding	33711549,33701346,33694296	33711727,33701420,33700513	Gene ID= ENSG00000137288.9 TPM= 4.25 Transcript Type= NA
chr6	33694293	33698657	33694293	33698657	-	ENST00000606961.1@UQCC2	ENST00000606961.1	protein_coding	33694293	33698657	Gene ID= ENSG00000137288.9 TPM= 15.93 Transcript Type= retained_intron
chr6	33706572	33709776	33706572	33709776	+	transcript1529.chr6.nnic@NA	transcript1529.chr6.nnic	NA	33706572	33709776	Gene ID= novel_gene_chr6_1530 TPM= 3.19 Transcript Type= NA
chr6	33721634	33725055	33721634	33725055	-	transcript1536.chr6.nnic@NA	transcript1536.chr6.nnic	NA	33721634	33725055	Gene ID= novel_gene_chr6_1537 TPM= 2.12 Transcript Type= NA
chr6	33721670	33746905	33721670	33746905	-	ENST00000293756.4@IP6K3	ENST00000293756.4	protein_coding	33746758,33735278,33728087,33726731,33725441,33721670	33746905,33735655,33728300,33726906,33725616,33723187	Gene ID= ENSG00000161896.11 TPM= 20.18 Transcript Type= protein_coding
chr6	33729722	33733984	33729722	33733984	-	transcript1538.chr6.nnic@NA	transcript1538.chr6.nnic	NA	33729722	33733984	Gene ID= novel_gene_chr6_1539 TPM= 2.12 Transcript Type= NA
chr6	33771432	33789125	33771432	33789125	-	ENST00000421671.6@LEMD2	ENST00000421671.6	protein_coding	33788775,33786734,33784352,33781077,33780100,33778242,33777138,33776954,33771432	33789125,33786774,33784427,33781153,33780179,33778387,33777239,33777056,33772778	Gene ID= ENSG00000161904.11 TPM= 1.06 Transcript Type= nonsense_mediated_decay
chr6	33771202	33789136	33771202	33789136	-	ENST00000293760.9@LEMD2	ENST00000293760.9	protein_coding	33788381,33786734,33784352,33781077,33780100,33778242,33777138,33776954,33771202	33789136,33786774,33784427,33781153,33780179,33778387,33777239,33777056,33772778	Gene ID= ENSG00000161904.11 TPM= 107.28 Transcript Type= protein_coding
chr6	34236873	34246230	34236873	34246230	+	ENST00000447654.5@HMGA1	ENST00000447654.5	protein_coding	34236873,34240737,34242712,34243468,34244831	34237317,34240915,34242795,34243518,34246230	Gene ID= ENSG00000137309.19 TPM= 17.71 Transcript Type= protein_coding
chr6	34236873	34246231	34236873	34246231	+	ENST00000311487.9@HMGA1	ENST00000311487.9	protein_coding	34236873,34237204,34240737,34242712,34243468,34244831	34236963,34237317,34240915,34242795,34243518,34246231	Gene ID= ENSG00000137309.19 TPM= 33.64 Transcript Type= protein_coding
chr6	34236873	34246231	34236873	34246231	+	ENST00000401473.7@HMGA1	ENST00000401473.7	protein_coding	34236873,34237204,34240737,34242712,34243468,34244831	34236963,34237317,34240882,34242795,34243518,34246231	Gene ID= ENSG00000137309.19 TPM= 18.77 Transcript Type= protein_coding
chr6	34246381	34249108	34246381	34249108	-	ENST00000636500.1@SMIM29	ENST00000636500.1	protein_coding	34248727,34247681,34247467,34247044,34246381	34249108,34247864,34247492,34247149,34246868	Gene ID= ENSG00000186577.12 TPM= 14.69 Transcript Type= protein_coding
chr6	34246380	34249470	34246380	34249470	-	ENST00000476320.5@SMIM29	ENST00000476320.5	protein_coding	34248979,34247681,34247467,34247044,34246380	34249470,34247864,34247492,34247149,34246868	Gene ID= ENSG00000186577.12 TPM= 48.86 Transcript Type= protein_coding
chr6	34246395	34249040	34246395	34249040	-	ENST00000394990.8@SMIM29	ENST00000394990.8	protein_coding	34248979,34247741,34247467,34247044,34246395	34249040,34247864,34247492,34247149,34246868	Gene ID= ENSG00000186577.12 TPM= 4.07 Transcript Type= protein_coding
chr6	34246395	34249020	34246395	34249020	-	ENST00000413013.6@SMIM29	ENST00000413013.6	protein_coding	34248979,34247681,34247044,34246395	34249020,34247864,34247149,34246868	Gene ID= ENSG00000186577.12 TPM= 3.54 Transcript Type= nonsense_mediated_decay
chr6	34279679	34392674	34279679	34392674	-	ENST00000607016.1@NUDT3	ENST00000607016.1	protein_coding	34392264,34341862,34295641,34293451,34279679	34392674,34341972,34295685,34293535,34288931	Gene ID= ENSG00000272325.1 TPM= 37.18 Transcript Type= protein_coding
chr6	34397219	34398874	34397219	34398874	+	transcript1591.chr6.nnic@NA	transcript1591.chr6.nnic	NA	34397219	34398874	Gene ID= novel_gene_chr6_1592 TPM= 2.12 Transcript Type= NA
chr6	34417454	34426125	34417454	34426125	-	ENST00000326199.12@RPS10	ENST00000326199.12	protein_coding	34426032,34425072,34424669,34421730,34418369,34417454	34426125,34425221,34424840,34421807,34418424,34417547	Gene ID= ENSG00000124614.13 TPM= 96.13 Transcript Type= protein_coding
chr6	34417466	34426041	34417466	34426041	-	ENST00000621356.2@RPS10	ENST00000621356.2	protein_coding	34425796,34425072,34424669,34421730,34418369,34417466	34426041,34425221,34424840,34421807,34418424,34417547	Gene ID= ENSG00000124614.13 TPM= 5.84 Transcript Type= protein_coding
chr6	34466061	34535221	34466061	34535221	+	ENST00000620693.4@PACSIN1	ENST00000620693.4	protein_coding	34466061,34526243,34527332,34528642,34529397,34529666,34530243,34530460,34531600,34532421	34466270,34526368,34527488,34528877,34529552,34529841,34530363,34530587,34531787,34535221	Gene ID= ENSG00000124507.10 TPM= 31.86 Transcript Type= protein_coding
chr6	34587288	34696859	34587288	34696859	-	ENST00000374026.7@C6orf106	ENST00000374026.7	protein_coding	34696446,34654625,34606555,34587288	34696859,34654779,34606904,34590600	Gene ID= ENSG00000196821.9 TPM= 37.71 Transcript Type= protein_coding
chr6	34587288	34696847	34587288	34696847	-	ENST00000374023.7@C6orf106	ENST00000374023.7	protein_coding	34696446,34654625,34646601,34606555,34587288	34696847,34654779,34646798,34606904,34590600	Gene ID= ENSG00000196821.9 TPM= 61.07 Transcript Type= protein_coding
chr6	34696317	34697470	34696317	34697470	+	ENST00000606971.5@AL451165.2	ENST00000606971.5	antisense_RNA	34696317,34697159	34696722,34697470	Gene ID= ENSG00000272288.5 TPM= 1.06 Transcript Type= antisense_RNA
chr6	34696945	34697470	34696945	34697470	+	ENST00000606496.1@AL451165.2	ENST00000606496.1	antisense_RNA	34696945,34697159	34696997,34697470	Gene ID= ENSG00000272288.5 TPM= 16.99 Transcript Type= antisense_RNA
chr6	34757406	34773794	34757406	34773794	+	ENST00000244520.9@SNRPC	ENST00000244520.9	protein_coding	34757406,34757912,34762595,34767908,34770291,34773446	34757551,34757954,34762703,34767997,34770395,34773794	Gene ID= ENSG00000124562.9 TPM= 141.27 Transcript Type= protein_coding
chr6	34792099	34838080	34792099	34838080	+	transcript1604.chr6.nic@UHRF1BP1	transcript1604.chr6.nic	protein_coding	34792099,34821653,34821917,34823257,34834217,34834721,34835294,34836156	34792294,34821815,34821955,34823348,34834406,34834861,34835464,34838080	Gene ID= ENSG00000065060.16 TPM= 2.12 Transcript Type= NA
chr6	34877778	34888089	34877778	34888089	-	ENST00000361288.8@TAF11	ENST00000361288.8	protein_coding	34887787,34882932,34880289,34879967,34877778	34888089,34883080,34880376,34880063,34878720	Gene ID= ENSG00000064995.16 TPM= 16.99 Transcript Type= protein_coding
chr6	34877778	34888071	34877778	34888071	-	ENST00000420584.3@TAF11	ENST00000420584.3	protein_coding	34887787,34882932,34880289,34877778	34888071,34883080,34880376,34878720	Gene ID= ENSG00000064995.16 TPM= 1.06 Transcript Type= protein_coding
chr6	34889265	35091413	34889265	35091413	+	ENST00000360359.4@ANKS1A	ENST00000360359.4	protein_coding	34889265,34967239,34970010,34981690,34982752,34983113,34983324,34985082,34989224,34994302,35017473,35054099,35060147,35078558,35079516,35079821,35080994,35082691,35083155,35083417,35084121,35085766,35086952,35088606	34889599,34967319,34970166,34981986,34982827,34983214,34983425,34985278,34989316,34994422,35018059,35054165,35060253,35078656,35079668,35079928,35081158,35082816,35083226,35083503,35084258,35085936,35087049,35091413	Gene ID= ENSG00000064999.13 TPM= 1.06 Transcript Type= protein_coding
chr6	34889280	34970837	34889280	34970837	+	transcript1618.chr6.nnic@ANKS1A	transcript1618.chr6.nnic	protein_coding	34889280,34904838,34967239,34970010	34889599,34904953,34967319,34970837	Gene ID= ENSG00000064999.13 TPM= 2.12 Transcript Type= NA
chr6	35029351	35031259	35029351	35031259	-	transcript1625.chr6.nnic@NA	transcript1625.chr6.nnic	NA	35029351	35031259	Gene ID= novel_gene_chr6_1626 TPM= 3.19 Transcript Type= NA
chr6	35259510	35295983	35259510	35295983	+	transcript1635.chr6.nic@ZNF76	transcript1635.chr6.nic	protein_coding	35259510,35281056,35286128,35286322,35287646,35290266,35290641,35291278,35291558,35292554,35292881,35293751,35294456,35295144	35259727,35281224,35286208,35286399,35287845,35290382,35290716,35291403,35291737,35292787,35293044,35293915,35294569,35295983	Gene ID= ENSG00000065029.14 TPM= 12.97 Transcript Type= NA
chr6	35259672	35295985	35259672	35295985	+	ENST00000373953.7@ZNF76	ENST00000373953.7	protein_coding	35259672,35281056,35286128,35286322,35287646,35290266,35290641,35291278,35291558,35292554,35292881,35293751,35294456,35295144	35259841,35281224,35286208,35286399,35287845,35290382,35290716,35291403,35291737,35292787,35293044,35293915,35294569,35295985	Gene ID= ENSG00000065029.14 TPM= 34.74 Transcript Type= protein_coding
chr6	35259510	35295983	35259510	35295983	+	transcript1639.chr6.nic@ZNF76	transcript1639.chr6.nic	protein_coding	35259510,35281056,35286128,35286322,35287646,35290266,35290641,35291278,35291558,35292554,35292881,35294456,35295144	35259727,35281224,35286208,35286399,35287845,35290382,35290716,35291403,35291737,35292787,35293044,35294569,35295983	Gene ID= ENSG00000065029.14 TPM= 2.88 Transcript Type= NA
chr6	35259705	35295983	35259705	35295983	+	transcript1642.chr6.nic@ZNF76	transcript1642.chr6.nic	protein_coding	35259705,35281056,35286128,35286322,35287646,35290266,35290641,35291278,35291558,35292540,35292881,35294456,35295144	35259841,35281224,35286208,35286399,35287845,35290382,35290716,35291403,35291737,35292787,35293044,35294569,35295983	Gene ID= ENSG00000065029.14 TPM= 2.88 Transcript Type= NA
chr6	35259705	35295983	35259705	35295983	+	transcript1646.chr6.nnic@ZNF76	transcript1646.chr6.nnic	protein_coding	35259705,35281056,35286128,35286322,35287646,35290266,35290641,35291278,35292554,35292881,35294456,35295144	35259841,35281224,35286208,35286399,35287845,35290382,35290716,35291403,35292787,35293044,35294569,35295983	Gene ID= ENSG00000065029.14 TPM= 3.94 Transcript Type= NA
chr6	35259705	35288971	35259705	35288971	+	transcript1649.chr6.nic@ZNF76	transcript1649.chr6.nic	protein_coding	35259705,35281056,35286128,35286322,35287646	35259841,35281224,35286208,35286399,35288971	Gene ID= ENSG00000065029.14 TPM= 5.31 Transcript Type= NA
chr6	35291872	35295983	35291872	35295983	+	transcript1650.chr6.nic@ZNF76	transcript1650.chr6.nic	protein_coding	35291872,35292881,35293751,35294456,35295144	35292787,35293044,35293915,35294569,35295983	Gene ID= ENSG00000065029.14 TPM= 9.78 Transcript Type= NA
chr6	35259784	35288971	35259784	35288971	+	transcript1654.chr6.nic@ZNF76	transcript1654.chr6.nic	protein_coding	35259784,35281056,35286128	35259841,35281224,35288971	Gene ID= ENSG00000065029.14 TPM= 7.44 Transcript Type= NA
chr6	35259774	35295983	35259774	35295983	+	ENST00000339411.5@ZNF76	ENST00000339411.5	protein_coding	35259774,35281056,35286128,35286322,35287646,35290266,35290641,35291278,35291558,35292554,35292881,35294456,35295144	35259841,35281224,35286208,35286399,35287845,35290382,35290716,35291403,35291737,35292787,35293044,35294569,35295983	Gene ID= ENSG00000065029.14 TPM= 25.18 Transcript Type= protein_coding
chr6	35297852	35321771	35297852	35321771	+	ENST00000316637.6@DEF6	ENST00000316637.6	protein_coding	35297852,35309670,35310459,35312302,35312626,35317891,35318173,35319524,35319819,35320884,35321187	35297952,35309810,35310644,35312538,35312772,35317999,35318471,35319690,35320017,35320974,35321771	Gene ID= ENSG00000023892.10 TPM= 2.12 Transcript Type= protein_coding
chr6	35342538	35428178	35342538	35428178	+	transcript1662.chr6.nnic@PPARD	transcript1662.chr6.nnic	protein_coding	35342538,35347067,35410987,35420127,35421820,35423946,35424329,35425948	35342681,35347150,35411217,35420281,35421958,35424148,35424779,35428178	Gene ID= ENSG00000112033.13 TPM= 13.28 Transcript Type= NA
chr6	35342558	35428191	35342558	35428191	+	ENST00000360694.7@PPARD	ENST00000360694.7	protein_coding	35342558,35347067,35410987,35420127,35421820,35423946,35424329,35425832	35342681,35347150,35411217,35420281,35421958,35424148,35424779,35428191	Gene ID= ENSG00000112033.13 TPM= 15.4 Transcript Type= protein_coding
chr6	35347910	35351107	35347910	35351107	-	transcript1668.chr6.nnic@NA	transcript1668.chr6.nnic	NA	35347910	35351107	Gene ID= novel_gene_chr6_1669 TPM= 13.81 Transcript Type= NA
chr6	35357540	35360218	35357540	35360218	-	transcript1670.chr6.nnic@NA	transcript1670.chr6.nnic	NA	35357540	35360218	Gene ID= novel_gene_chr6_1671 TPM= 3.19 Transcript Type= NA
chr6	35452361	35467103	35452361	35467103	+	ENST00000229769.2@FANCE	ENST00000229769.2	protein_coding	35452361,35455747,35457556,35457916,35458297,35459331,35459682,35460552,35462789,35466244	35452793,35456353,35457600,35457984,35458440,35459454,35459760,35460618,35462914,35467103	Gene ID= ENSG00000112039.3 TPM= 11.68 Transcript Type= protein_coding
chr6	35468408	35470785	35468408	35470785	+	ENST00000322203.6@RPL10A	ENST00000322203.6	protein_coding	35468408,35468799,35468947,35469381,35470179,35470580	35468439,35468873,35469027,35469529,35470351,35470785	Gene ID= ENSG00000198755.10 TPM= 285.88 Transcript Type= protein_coding
chr6	35468420	35470785	35468420	35470785	+	ENST00000478340.2@RPL10A	ENST00000478340.2	protein_coding	35468420,35468799,35468947,35469381,35470179,35470580	35468439,35468873,35469285,35469529,35470351,35470785	Gene ID= ENSG00000198755.10 TPM= 2.81 Transcript Type= processed_transcript
chr6	35468408	35470785	35468408	35470785	+	ENST00000467020.5@RPL10A	ENST00000467020.5	protein_coding	35468408,35468799,35468947,35470179,35470580	35468439,35468873,35469529,35470351,35470785	Gene ID= ENSG00000198755.10 TPM= 2.81 Transcript Type= processed_transcript
chr6	35468420	35470785	35468420	35470785	+	ENST00000464112.5@RPL10A	ENST00000464112.5	protein_coding	35468420,35468947,35469381,35470179,35470580	35468873,35469027,35469529,35470351,35470785	Gene ID= ENSG00000198755.10 TPM= 8.66 Transcript Type= processed_transcript
chr6	35473597	35497038	35473597	35497038	-	transcript1680.chr6.nnic@TEAD3	transcript1680.chr6.nnic	protein_coding	35496898,35486461,35484560,35480312,35480060,35479305,35478434,35478275,35477311,35476302,35475919,35475566,35475336,35473597	35497038,35486711,35484624,35480374,35480122,35479316,35478571,35478324,35477372,35476435,35476092,35475706,35475488,35475157	Gene ID= ENSG00000007866.19 TPM= 20.98 Transcript Type= NA
chr6	35473597	35497092	35473597	35497092	-	transcript1681.chr6.nnic@TEAD3	transcript1681.chr6.nnic	protein_coding	35496898,35486461,35484560,35480060,35479305,35478434,35478275,35477311,35476302,35475919,35475566,35475336,35473597	35497092,35486711,35484624,35480122,35479316,35478571,35478324,35477372,35476435,35476092,35475706,35475488,35475157	Gene ID= ENSG00000007866.19 TPM= 35.85 Transcript Type= NA
chr6	35473597	35497076	35473597	35497076	-	ENST00000338863.11@TEAD3	ENST00000338863.11	protein_coding	35496898,35486461,35484560,35480312,35479305,35478434,35478275,35477311,35476302,35475919,35475566,35475336,35473597	35497076,35486711,35484624,35480374,35479316,35478571,35478324,35477372,35476435,35476092,35475706,35475488,35475157	Gene ID= ENSG00000007866.19 TPM= 18.85 Transcript Type= protein_coding
chr6	35573590	35688915	35573590	35688915	-	transcript1691.chr6.nnic@FKBP5	transcript1691.chr6.nnic	protein_coding	35688804,35620132,35619096,35597248,35591130,35587034,35580036,35576994,35573590	35688915,35620274,35619210,35597404,35591220,35587117,35580221,35577233,35575942	Gene ID= ENSG00000096060.14 TPM= 5.84 Transcript Type= NA
chr6	35573590	35688937	35573590	35688937	-	ENST00000357266.8@FKBP5	ENST00000357266.8	protein_coding	35688804,35642720,35637014,35620132,35619096,35597248,35591130,35587034,35580036,35576994,35573590	35688937,35642843,35637158,35620274,35619210,35597404,35591220,35587117,35580221,35577233,35575942	Gene ID= ENSG00000096060.14 TPM= 29.21 Transcript Type= protein_coding
chr6	35832966	35921342	35832966	35921342	-	ENST00000373825.6@SRPK1	ENST00000373825.6	protein_coding	35921044,35920468,35890895,35888815,35888024,35886724,35874233,35872563,35870934,35870281,35869482,35869010,35857261,35842535,35838337,35832966	35921342,35920528,35891013,35888923,35888111,35886811,35874339,35872728,35870959,35870494,35869901,35869110,35857368,35842604,35838429,35835488	Gene ID= ENSG00000096063.15 TPM= 9.56 Transcript Type= protein_coding
chr6	35833034	35921147	35833034	35921147	-	ENST00000423325.6@SRPK1	ENST00000423325.6	protein_coding	35921044,35920468,35890895,35888815,35888024,35886724,35874233,35872563,35870934,35870281,35869482,35869010,35857261,35842535,35838337,35833034	35921147,35920528,35891041,35888923,35888111,35886811,35874339,35872728,35870959,35870494,35869901,35869110,35857368,35842604,35838429,35835488	Gene ID= ENSG00000096063.15 TPM= 9.56 Transcript Type= protein_coding
chr6	36027770	36110755	36027770	36110755	+	ENST00000229794.8@MAPK14	ENST00000229794.8	protein_coding	36027770,36052699,36059289,36072873,36073691,36074049,36075848,36076537,36095987,36102571,36107455,36108380	36028273,36052828,36059347,36072984,36073720,36074096,36075962,36076608,36096066,36102649,36107628,36110755	Gene ID= ENSG00000112062.10 TPM= 33.99 Transcript Type= protein_coding
chr6	36442767	36491143	36442767	36491143	+	ENST00000373731.6@KCTD20	ENST00000373731.6	protein_coding	36442767,36470052,36474789,36479121,36479591,36481562,36484714,36486883	36443111,36470257,36475062,36479223,36479711,36481759,36484824,36491143	Gene ID= ENSG00000112078.13 TPM= 9.03 Transcript Type= protein_coding
chr6	36442767	36491143	36442767	36491143	+	ENST00000536244.5@KCTD20	ENST00000536244.5	protein_coding	36442767,36470052,36479121,36479591,36481562,36484714,36486883	36443111,36470257,36479223,36479711,36481759,36484824,36491143	Gene ID= ENSG00000112078.13 TPM= 5.84 Transcript Type= protein_coding
chr6	36442988	36482024	36442988	36482024	+	transcript1724.chr6.nic@KCTD20	transcript1724.chr6.nic	protein_coding	36442988,36470052,36474789,36479121,36479591,36481562	36443111,36470257,36475062,36479223,36479711,36482024	Gene ID= ENSG00000112078.13 TPM= 3.19 Transcript Type= NA
chr6	36442988	36490554	36442988	36490554	+	transcript1726.chr6.nnic@KCTD20	transcript1726.chr6.nnic	protein_coding	36442988,36479121,36479591,36481562,36484714,36486883	36443111,36479223,36479711,36481759,36484824,36490554	Gene ID= ENSG00000112078.13 TPM= 2.12 Transcript Type= NA
chr6	36493891	36547480	36493891	36547480	-	transcript1709.chr6.nnic@STK38	transcript1709.chr6.nnic	protein_coding	36547190,36540072,36525591,36524341,36521734,36517717,36515338,36507500,36506583,36499873,36498363,36497780,36496711,36493891	36547480,36540207,36525642,36524463,36521817,36517840,36515492,36507602,36506644,36499990,36498486,36497875,36496805,36494637	Gene ID= ENSG00000112079.8 TPM= 9.56 Transcript Type= NA
chr6	36496044	36547480	36496044	36547480	-	transcript1712.chr6.nic@STK38	transcript1712.chr6.nic	protein_coding	36547190,36540072,36525591,36524341,36521734,36517717,36515338,36507500,36506583,36499873,36498363,36497780,36496044	36547480,36540207,36525642,36524463,36521817,36517840,36515492,36507602,36506644,36499990,36498486,36497875,36496805	Gene ID= ENSG00000112079.8 TPM= 3.19 Transcript Type= NA
chr6	36493892	36547470	36493892	36547470	-	ENST00000229812.7@STK38	ENST00000229812.7	protein_coding	36547190,36540072,36525591,36524341,36521734,36517717,36515338,36507500,36506583,36499873,36498363,36497780,36496711,36493892	36547470,36540207,36525642,36524463,36521817,36517840,36515492,36507602,36506644,36499990,36498486,36497875,36496805,36495914	Gene ID= ENSG00000112079.8 TPM= 48.86 Transcript Type= protein_coding
chr6	36600403	36602778	36600403	36602778	+	ENST00000614136.1@SRSF3	ENST00000614136.1	protein_coding	36600403	36602778	Gene ID= ENSG00000112081.16 TPM= 4.25 Transcript Type= retained_intron
chr6	36676491	36680859	36676491	36680859	+	transcript1753.chr6.nnic@CDKN1A	transcript1753.chr6.nnic	protein_coding	36676491,36677825,36678312	36676570,36677933,36680859	Gene ID= ENSG00000124762.13 TPM= 3.19 Transcript Type= NA
chr6	36678710	36687337	36678710	36687337	+	ENST00000405375.5@CDKN1A	ENST00000405375.5	protein_coding	36678710,36684097,36685751	36678939,36684546,36687337	Gene ID= ENSG00000124762.13 TPM= 28.76 Transcript Type= protein_coding
chr6	36678658	36687339	36678658	36687339	+	ENST00000244741.9@CDKN1A	ENST00000244741.9	protein_coding	36678658,36684097,36685751	36678798,36684546,36687339	Gene ID= ENSG00000124762.13 TPM= 300.33 Transcript Type= protein_coding
chr6	36678714	36680859	36678714	36680859	+	transcript1760.chr6.nnic@CDKN1A	transcript1760.chr6.nnic	protein_coding	36678714,36680474	36678798,36680859	Gene ID= ENSG00000124762.13 TPM= 2.12 Transcript Type= NA
chr6	36740778	36840002	36740778	36840002	-	ENST00000244751.6@CPNE5	ENST00000244751.6	protein_coding	36839283,36823058,36822114,36799967,36798455,36798165,36794590,36792033,36778854,36774961,36765335,36762917,36756245,36753034,36748221,36746396,36745388,36745048,36744268,36743689,36740778	36840002,36823098,36822160,36800070,36798494,36798241,36794649,36792096,36778957,36775065,36765376,36762992,36756298,36753095,36748267,36746577,36745515,36745150,36744325,36743762,36742486	Gene ID= ENSG00000124772.11 TPM= 4.25 Transcript Type= protein_coding
chr6	36854827	36875024	36854827	36875024	-	ENST00000373699.5@PPIL1	ENST00000373699.5	protein_coding	36874717,36871718,36856586,36854827	36875024,36871872,36856654,36856033	Gene ID= ENSG00000137168.7 TPM= 12.75 Transcript Type= protein_coding
chr6	36885854	36928964	36885854	36928964	+	ENST00000480824.6@C6orf89	ENST00000480824.6	protein_coding	36885854,36894504,36899426,36902221,36914284,36914554,36916445,36919578,36923347	36886028,36894603,36899633,36902434,36914435,36914693,36916574,36919701,36928964	Gene ID= ENSG00000198663.16 TPM= 37.18 Transcript Type= protein_coding
chr6	36885864	36923522	36885864	36923522	+	ENST00000355190.7@C6orf89	ENST00000355190.7	protein_coding	36885864,36899426,36902221,36914284,36914554,36916445,36919578,36923347	36886028,36899633,36902434,36914435,36914693,36916574,36919701,36923522	Gene ID= ENSG00000198663.16 TPM= 6.37 Transcript Type= protein_coding
chr6	36954720	36964835	36954720	36964835	+	transcript1784.chr6.nic@PI16	transcript1784.chr6.nic	protein_coding	36954720,36959145,36961451,36961886,36962935,36963823,36964386	36954931,36959366,36961560,36961974,36963033,36963962,36964835	Gene ID= ENSG00000164530.13 TPM= 5.31 Transcript Type= NA
chr6	36968141	36986179	36968141	36986179	-	transcript1821.chr6.nic@MTCH1	transcript1821.chr6.nic	protein_coding	36985853,36981588,36978505,36978078,36977634,36977199,36975658,36972652,36970647,36970406,36968141	36986179,36981672,36978611,36978155,36977691,36977250,36975717,36972796,36970694,36970473,36970114	Gene ID= ENSG00000137409.19 TPM= 18.77 Transcript Type= NA
chr6	37005647	37029070	37005647	37029070	+	ENST00000274963.12@FGD2	ENST00000274963.12	protein_coding	37005647,37008834,37010973,37011706,37013609,37013962,37014646,37014892,37015768,37020541,37020709,37021512,37022239,37025792,37027429,37027948	37005885,37009065,37011050,37011854,37013765,37014100,37014704,37015038,37015860,37020620,37020739,37021604,37022370,37025938,37027575,37029070	Gene ID= ENSG00000146192.14 TPM= 2.12 Transcript Type= protein_coding
chr6	37170203	37175426	37170203	37175426	+	ENST00000373509.5@PIM1	ENST00000373509.5	protein_coding	37170203,37170773,37170981,37171125,37172996,37173934	37170657,37170879,37171031,37171491,37173172,37175426	Gene ID= ENSG00000137193.13 TPM= 31.86 Transcript Type= protein_coding
chr6	37311255	37315161	37311255	37315161	+	transcript1839.chr6.nic@TBC1D22B	transcript1839.chr6.nic	protein_coding	37311255,37313816	37313024,37315161	Gene ID= ENSG00000065491.8 TPM= 3.19 Transcript Type= NA
chr6	37257772	37332970	37257772	37332970	+	ENST00000373491.3@TBC1D22B	ENST00000373491.3	protein_coding	37257772,37269594,37279304,37282185,37282882,37284336,37287007,37291243,37312918,37313816,37316703,37317111,37331044	37257973,37269650,37279611,37282364,37282952,37284464,37287072,37291357,37313024,37313891,37316830,37317206,37332970	Gene ID= ENSG00000065491.8 TPM= 6.37 Transcript Type= protein_coding
chr6	37353950	37391231	37353950	37391231	+	transcript1844.chr6.nic@RNF8	transcript1844.chr6.nic	protein_coding	37353950,37360446,37368484,37371512,37376926,37381150,37390742	37354275,37360574,37369218,37371574,37377033,37381354,37391231	Gene ID= ENSG00000112130.16 TPM= 2.12 Transcript Type= NA
chr6	37354015	37374708	37354015	37374708	+	transcript1845.chr6.nic@RNF8	transcript1845.chr6.nic	protein_coding	37354015,37360446,37368484,37371512,37374620	37354275,37360574,37369218,37371574,37374708	Gene ID= ENSG00000112130.16 TPM= 3.19 Transcript Type= NA
chr6	37370703	37374510	37370703	37374510	-	transcript1848.chr6.nnic@NA	transcript1848.chr6.nnic	NA	37370703	37374510	Gene ID= novel_gene_chr6_1849 TPM= 2.12 Transcript Type= NA
chr6	37387707	37391231	37387707	37391231	+	transcript1846.chr6.nnic@NA	transcript1846.chr6.nnic	NA	37387707	37391231	Gene ID= novel_gene_chr6_1847 TPM= 2.12 Transcript Type= NA
chr6	37433220	37481506	37433220	37481506	+	ENST00000373451.8@CMTR1	ENST00000373451.8	protein_coding	37433220,37435624,37443999,37446291,37450251,37451806,37453047,37453240,37458612,37459566,37461549,37461970,37462829,37471021,37471847,37472419,37473470,37474524,37475321,37476126,37477592,37478409,37479147,37480013	37433377,37435762,37444150,37446449,37450343,37451877,37453141,37453312,37458810,37459684,37461645,37462102,37463008,37471077,37471904,37472487,37473601,37474646,37475412,37476194,37477639,37478521,37479255,37481506	Gene ID= ENSG00000137200.12 TPM= 33.99 Transcript Type= protein_coding
chr6	37482920	37499922	37482920	37499922	-	ENST00000373408.3@CCDC167	ENST00000373408.3	protein_coding	37499822,37485100,37484810,37482920	37499922,37485194,37484862,37483289	Gene ID= ENSG00000198937.8 TPM= 31.86 Transcript Type= protein_coding
chr6	37630679	37697990	37630679	37697990	-	ENST00000434837.7@MDGA1	ENST00000434837.7	protein_coding	37696745,37663967,37658245,37655700,37654800,37654274,37652011,37650109,37648982,37647173,37646198,37645933,37644497,37643809,37638537,37638205,37630679	37697990,37664106,37658419,37655896,37654932,37654543,37652340,37650405,37649266,37647324,37646375,37645956,37644649,37643943,37638667,37638313,37637459	Gene ID= ENSG00000112139.14 TPM= 3.19 Transcript Type= protein_coding
chr6	37649764	37697979	37649764	37697979	-	transcript1855.chr6.nnic@MDGA1	transcript1855.chr6.nnic	protein_coding	37696745,37663967,37658245,37655700,37654800,37654274,37652011,37650109,37649764	37697979,37664106,37658419,37655896,37654932,37654543,37652340,37650405,37649893	Gene ID= ENSG00000112139.14 TPM= 2.12 Transcript Type= NA
chr6	37651513	37697758	37651513	37697758	-	transcript1857.chr6.nic@MDGA1	transcript1857.chr6.nic	protein_coding	37696745,37663967,37658245,37655700,37654800,37654274,37651513	37697758,37664106,37658419,37655896,37654932,37654543,37652340	Gene ID= ENSG00000112139.14 TPM= 4.25 Transcript Type= NA
chr6	37819874	38154624	37819874	38154624	+	transcript1859.chr6.nnic@ZFAND3	transcript1859.chr6.nnic	protein_coding	37819874,37929959,37964081,38061593,38082392,38116572,38152235	37820016,37929999,37964186,38061775,38082457,38116739,38154624	Gene ID= ENSG00000156639.11 TPM= 18.06 Transcript Type= NA
chr6	37819756	37931566	37819756	37931566	+	transcript1864.chr6.nic@ZFAND3	transcript1864.chr6.nic	protein_coding	37819756,37929959	37820016,37931566	Gene ID= ENSG00000156639.11 TPM= 3.19 Transcript Type= NA
chr6	37819499	38154624	37819499	38154624	+	ENST00000287218.8@ZFAND3	ENST00000287218.8	protein_coding	37819499,37929959,38061593,38082392,38116572,38152235	37820016,37929999,38061775,38082457,38116739,38154624	Gene ID= ENSG00000156639.11 TPM= 52.05 Transcript Type= protein_coding
chr6	38126925	38127921	38126925	38127921	-	transcript1867.chr6.nnic@NA	transcript1867.chr6.nnic	NA	38126925	38127921	Gene ID= novel_gene_chr6_1868 TPM= 2.12 Transcript Type= NA
chr6	38173497	38345096	38173497	38345096	-	transcript1870.chr6.nic@BTBD9	transcript1870.chr6.nic	protein_coding	38344984,38288272,38256409,38192519,38173497	38345096,38288461,38256516,38192597,38175182	Gene ID= ENSG00000183826.16 TPM= 4.25 Transcript Type= NA
chr6	38169809	38173234	38169809	38173234	-	transcript1871.chr6.nnic@NA	transcript1871.chr6.nnic	NA	38169809	38173234	Gene ID= novel_gene_chr6_1872 TPM= 38.24 Transcript Type= NA
chr6	38496756	38498473	38496756	38498473	+	transcript1877.chr6.nnic@NA	transcript1877.chr6.nnic	NA	38496756	38498473	Gene ID= novel_gene_chr6_1878 TPM= 7.44 Transcript Type= NA
chr6	38675925	38703141	38675925	38703141	-	ENST00000373365.4@GLO1	ENST00000373365.4	protein_coding	38702971,38686892,38684374,38682808,38682012,38675925	38703141,38686974,38684514,38682875,38682101,38677383	Gene ID= ENSG00000124767.6 TPM= 99.84 Transcript Type= protein_coding
chr6	38675943	38703156	38675943	38703156	-	transcript1888.chr6.nnic@GLO1	transcript1888.chr6.nnic	protein_coding	38702971,38684374,38682808,38682012,38675943	38703156,38684514,38682875,38682101,38677383	Gene ID= ENSG00000124767.6 TPM= 9.56 Transcript Type= NA
chr6	39104064	39115189	39104064	39115189	-	ENST00000229903.4@SAYSD1	ENST00000229903.4	protein_coding	39114883,39104064	39115189,39105776	Gene ID= ENSG00000112167.9 TPM= 1.06 Transcript Type= protein_coding
chr6	39905059	39934551	39905059	39934551	-	ENST00000373188.6@MOCS1	ENST00000373188.6	protein_coding	39934295,39927329,39925678,39916068,39913774,39913317,39912892,39912264,39909835,39909040,39905059	39934551,39927455,39925845,39916232,39913835,39913428,39913004,39912374,39909955,39909102,39907117	Gene ID= ENSG00000124615.17 TPM= 1.06 Transcript Type= protein_coding
chr6	39905321	39934500	39905321	39934500	-	transcript1901.chr6.nic@MOCS1	transcript1901.chr6.nic	protein_coding	39934295,39927329,39925678,39916068,39913774,39913317,39912892,39912264,39909835,39905321	39934500,39927455,39925845,39916232,39913835,39913428,39913004,39912374,39909955,39907117	Gene ID= ENSG00000124615.17 TPM= 5.84 Transcript Type= NA
chr6	39905321	39934497	39905321	39934497	-	ENST00000373195.7@MOCS1	ENST00000373195.7	protein_coding	39934295,39925678,39916068,39913774,39913317,39912892,39912264,39909835,39905321	39934497,39925845,39916232,39913835,39913428,39913004,39912374,39909955,39907117	Gene ID= ENSG00000124615.17 TPM= 3.72 Transcript Type= protein_coding
chr6	39905525	39934421	39905525	39934421	-	ENST00000340692.9@MOCS1	ENST00000340692.9	protein_coding	39934295,39927329,39925678,39916068,39913774,39913317,39912892,39912264,39909835,39909055,39905525	39934421,39927455,39925845,39916232,39913835,39913428,39913004,39912374,39909955,39909102,39907117	Gene ID= ENSG00000124615.17 TPM= 19.12 Transcript Type= protein_coding
chr6	40878494	40998354	40878494	40998354	+	transcript1910.chr6.nnic@NA	transcript1910.chr6.nnic	NA	40878494,40883022,40887223,40889220,40902601,40998138	40880452,40883102,40887388,40889415,40902702,40998354	Gene ID= novel_gene_chr6_1911 TPM= 9.56 Transcript Type= NA
chr6	40900045	40998354	40900045	40998354	+	transcript1922.chr6.nnic@NA	transcript1922.chr6.nnic	NA	40900045,40902601,40998138	40901189,40902702,40998354	Gene ID= novel_gene_chr6_1911 TPM= 5.31 Transcript Type= NA
chr6	40878883	40998690	40878883	40998690	-	transcript1917.chr6.nnic@NA	transcript1917.chr6.nnic	NA	40998138,40889220,40887223,40883022,40878883	40998690,40889415,40887388,40883102,40880452	Gene ID= novel_gene_chr6_1918 TPM= 3.19 Transcript Type= NA
chr6	40897940	40998360	40897940	40998360	-	transcript1919.chr6.nnic@NA	transcript1919.chr6.nnic	NA	40998138,40912620,40902601,40901966,40897940	40998360,40912713,40902702,40902227,40901189	Gene ID= novel_gene_chr6_1918 TPM= 3.19 Transcript Type= NA
chr6	41064778	41072591	41064778	41072591	-	ENST00000479950.5@OARD1	ENST00000479950.5	protein_coding	41072319,41071596,41071132,41070076,41068841,41064778	41072591,41071675,41071276,41070134,41068953,41067437	Gene ID= ENSG00000124596.16 TPM= 1.06 Transcript Type= protein_coding
chr6	41066801	41072538	41066801	41072538	-	ENST00000424266.6@OARD1	ENST00000424266.6	protein_coding	41072236,41071596,41071132,41070076,41068841,41066801	41072538,41071675,41071276,41070134,41068953,41067437	Gene ID= ENSG00000124596.16 TPM= 3.19 Transcript Type= protein_coding
chr6	41066475	41072489	41066475	41072489	-	ENST00000463088.5@OARD1	ENST00000463088.5	protein_coding	41072335,41071596,41071132,41070076,41068841,41066475	41072489,41071675,41071276,41070134,41068953,41067437	Gene ID= ENSG00000124596.16 TPM= 3.19 Transcript Type= protein_coding
chr6	41053159	41064514	41053159	41064514	+	transcript1944.chr6.nic@APOBEC2	transcript1944.chr6.nic	protein_coding	41053159,41061328	41053478,41064514	Gene ID= ENSG00000124701.5 TPM= 5.31 Transcript Type= NA
chr6	41053304	41064511	41053304	41064511	+	ENST00000244669.2@APOBEC2	ENST00000244669.2	protein_coding	41053304,41061328,41064101	41053478,41061892,41064511	Gene ID= ENSG00000124701.5 TPM= 125.33 Transcript Type= protein_coding
chr6	41072945	41099976	41072945	41099976	+	ENST00000341376.10@NFYA	ENST00000341376.10	protein_coding	41072945,41079029,41080811,41084046,41089579,41090204,41091528,41092912,41094396,41097357	41073084,41079164,41080897,41084192,41089710,41090309,41091694,41093085,41094497,41099976	Gene ID= ENSG00000001167.14 TPM= 6.37 Transcript Type= protein_coding
chr6	41158507	41163176	41158507	41163176	-	ENST00000373113.7@TREM2	ENST00000373113.7	protein_coding	41163043,41161263,41159792,41158873,41158507	41163176,41161613,41159882,41159066,41158780	Gene ID= ENSG00000095970.16 TPM= 1.06 Transcript Type= protein_coding
chr6	41546426	41602384	41546426	41602384	+	ENST00000373063.7@FOXP4	ENST00000373063.7	protein_coding	41546426,41565745,41577986,41584769,41585431,41587009,41587302,41587793,41588644,41589771,41589999,41590271,41591221,41594870,41597176,41597781,41598789	41546867,41565964,41578081,41584891,41585517,41587156,41587512,41587897,41588731,41589854,41590170,41590347,41591322,41594991,41597242,41597950,41602384	Gene ID= ENSG00000137166.14 TPM= 7.44 Transcript Type= protein_coding
chr6	41638447	41654246	41638447	41654246	+	ENST00000230321.10@MDFI	ENST00000230321.10	protein_coding	41638447,41638739,41646126,41649619,41653319	41638652,41638825,41646308,41649843,41654246	Gene ID= ENSG00000112559.13 TPM= 1.06 Transcript Type= protein_coding
chr6	41683978	41735049	41683978	41735049	-	transcript1955.chr6.nic@TFEB	transcript1955.chr6.nic	protein_coding	41734900,41691001,41690663,41689731,41687908,41687753,41687094,41686090,41683978	41735049,41691235,41690917,41689811,41688028,41687809,41687169,41686237,41685078	Gene ID= ENSG00000112561.17 TPM= 10.36 Transcript Type= NA
chr6	41686509	41735628	41686509	41735628	-	transcript1958.chr6.nic@TFEB	transcript1958.chr6.nic	protein_coding	41735350,41691001,41690663,41689731,41687908,41686509	41735628,41691235,41690917,41689811,41688028,41687809	Gene ID= ENSG00000112561.17 TPM= 3.19 Transcript Type= NA
chr6	41683980	41735608	41683980	41735608	-	ENST00000373033.5@TFEB	ENST00000373033.5	protein_coding	41735350,41691001,41690663,41689731,41687908,41687753,41687094,41686090,41683980	41735608,41691235,41690917,41689811,41688028,41687809,41687169,41686237,41685078	Gene ID= ENSG00000112561.17 TPM= 117.63 Transcript Type= protein_coding
chr6	41683979	41735527	41683979	41735527	-	ENST00000420312.5@TFEB	ENST00000420312.5	protein_coding	41735350,41691001,41689731,41687908,41687753,41687094,41686090,41683979	41735527,41691235,41689811,41688028,41687809,41687169,41686237,41685078	Gene ID= ENSG00000112561.17 TPM= 7.17 Transcript Type= protein_coding
chr6	41780738	41789891	41780738	41789891	+	transcript1964.chr6.nnic@AL365205.1	transcript1964.chr6.nnic	protein_coding	41780738,41781484,41783462,41784131,41784935,41785337,41786128,41786762,41789232,41789568	41780826,41781520,41783605,41784238,41785072,41785540,41786332,41787825,41789336,41789891	Gene ID= ENSG00000124593.15 TPM= 5.31 Transcript Type= NA
chr6	41780772	41789891	41780772	41789891	+	ENST00000487182.5@AL365205.1	ENST00000487182.5	protein_coding	41780772,41781350,41783462,41784935,41785337,41786128,41786762,41789232,41789568	41780826,41781520,41784238,41785072,41785540,41786332,41787825,41789336,41789891	Gene ID= ENSG00000124593.15 TPM= 4.25 Transcript Type= retained_intron
chr6	41787662	41789898	41787662	41789898	+	ENST00000398884.7@TOMM6	ENST00000398884.7	protein_coding	41787662,41789232,41789531	41787825,41789336,41789898	Gene ID= ENSG00000214736.7 TPM= 18.59 Transcript Type= protein_coding
chr6	41787665	41789896	41787665	41789896	+	ENST00000398881.3@TOMM6	ENST00000398881.3	protein_coding	41787665,41789232,41789568	41787825,41789336,41789896	Gene ID= ENSG00000214736.7 TPM= 14.34 Transcript Type= protein_coding
chr6	41905354	41921099	41905354	41921099	-	ENST00000265350.8@MED20	ENST00000265350.8	protein_coding	41921005,41916785,41909269,41905354	41921099,41916939,41909522,41907287	Gene ID= ENSG00000124641.15 TPM= 12.75 Transcript Type= protein_coding
chr6	41921188	41933046	41921188	41933046	+	ENST00000230340.8@BYSL	ENST00000230340.8	protein_coding	41921188,41927374,41930132,41930635,41931396,41931728,41932361	41921830,41927536,41930270,41930768,41931556,41931830,41933046	Gene ID= ENSG00000112578.9 TPM= 10.62 Transcript Type= protein_coding
chr6	41934933	41941848	41934933	41941848	-	ENST00000372991.8@CCND3	ENST00000372991.8	protein_coding	41941452,41940370,41937235,41936559,41934933	41941848,41940585,41937394,41936695,41936107	Gene ID= ENSG00000112576.12 TPM= 90.81 Transcript Type= protein_coding
chr6	41934956	42048968	41934956	42048968	-	ENST00000372988.8@CCND3	ENST00000372988.8	protein_coding	42048501,41940370,41937235,41936559,41934956	42048968,41940585,41937394,41936695,41936107	Gene ID= ENSG00000112576.12 TPM= 7.97 Transcript Type= protein_coding
chr6	42050524	42083274	42050524	42083274	+	ENST00000372977.7@TAF8	ENST00000372977.7	protein_coding	42050524,42051357,42055531,42055952,42057389,42066312,42068465,42077100,42077533	42050586,42051513,42055629,42056014,42057513,42066459,42068607,42077239,42083274	Gene ID= ENSG00000137413.15 TPM= 15.93 Transcript Type= protein_coding
chr6	42050513	42057789	42050513	42057789	+	ENST00000372978.7@TAF8	ENST00000372978.7	protein_coding	42050513,42051357,42055531,42055952,42057389	42050586,42051513,42055629,42056014,42057789	Gene ID= ENSG00000137413.15 TPM= 1.06 Transcript Type= protein_coding
chr6	42085845	42087461	42085845	42087461	+	transcript1989.chr6.nnic@NA	transcript1989.chr6.nnic	NA	42085845	42087461	Gene ID= novel_gene_chr6_1990 TPM= 2.12 Transcript Type= NA
chr6	42101118	42142444	42101118	42142444	-	ENST00000341865.8@C6orf132	ENST00000341865.8	protein_coding	42142300,42128672,42110216,42104463,42101118	42142444,42128778,42110291,42107583,42103878	Gene ID= ENSG00000188112.8 TPM= 2.12 Transcript Type= protein_coding
chr6	42199446	42202336	42199446	42202336	-	transcript2014.chr6.nnic@NA	transcript2014.chr6.nnic	NA	42199446	42202336	Gene ID= novel_gene_chr6_2015 TPM= 2.12 Transcript Type= NA
chr6	42206801	42217906	42206801	42217906	-	transcript2002.chr6.nnic@MRPS10	transcript2002.chr6.nnic	protein_coding	42217802,42214280,42214120,42211781,42210488,42208858,42206801	42217906,42214344,42214218,42211917,42210596,42208947,42208372	Gene ID= ENSG00000048544.5 TPM= 5.31 Transcript Type= NA
chr6	42206801	42217865	42206801	42217865	-	ENST00000053468.3@MRPS10	ENST00000053468.3	protein_coding	42217802,42214280,42214120,42211781,42210488,42208858,42206801	42217865,42214344,42214192,42211917,42210596,42208947,42208372	Gene ID= ENSG00000048544.5 TPM= 133.83 Transcript Type= protein_coding
chr6	42212843	42215370	42212843	42215370	+	transcript2012.chr6.nnic@NA	transcript2012.chr6.nnic	NA	42212843	42215370	Gene ID= novel_gene_chr6_2013 TPM= 2.12 Transcript Type= NA
chr6	42564062	42693504	42564062	42693504	+	ENST00000372901.1@UBR2	ENST00000372901.1	protein_coding	42564062,42573734,42592151,42594191,42603588,42605721,42606589,42612171,42615071,42616002,42617409,42632552,42632805,42635418,42637011,42640209,42641582,42642416,42644214,42644473,42645466,42648118,42650284,42652023,42652491,42655621,42658024,42658240,42658646,42659656,42662184,42663258,42665409,42666167,42670092,42670660,42673791,42674126,42676056,42676783,42678539,42679724,42683055,42684794,42688216,42689569,42691032	42564397,42573993,42592229,42594304,42603718,42605859,42606651,42612291,42615178,42616090,42617507,42632715,42632904,42635546,42637194,42640270,42641692,42642481,42644336,42644536,42645590,42648170,42650386,42652071,42652645,42655723,42658133,42658320,42658824,42659855,42662277,42663419,42665512,42666245,42670240,42670715,42673887,42674193,42676191,42676873,42678669,42679832,42683111,42684871,42688386,42689670,42693504	Gene ID= ENSG00000024048.10 TPM= 11.68 Transcript Type= protein_coding
chr6	42619455	42621360	42619455	42621360	-	transcript2021.chr6.nnic@NA	transcript2021.chr6.nnic	NA	42619455	42621360	Gene ID= novel_gene_chr6_2022 TPM= 3.19 Transcript Type= NA
chr6	42696600	42722574	42696600	42722574	-	ENST00000230381.6@PRPH2	ENST00000230381.6	protein_coding	42721754,42704365,42696600	42722574,42704611,42698507	Gene ID= ENSG00000112619.7 TPM= 3.19 Transcript Type= protein_coding
chr6	42744481	42746096	42744481	42746096	-	ENST00000372876.1@TBCC	ENST00000372876.1	protein_coding	42744481	42746096	Gene ID= ENSG00000124659.6 TPM= 26.55 Transcript Type= protein_coding
chr6	42879910	42887010	42879910	42887010	+	transcript2038.chr6.nic@RPL7L1	transcript2038.chr6.nic	protein_coding	42879910,42883451,42884613,42885974,42886256	42879951,42883614,42884750,42886083,42887010	Gene ID= ENSG00000146223.14 TPM= 6.37 Transcript Type= NA
chr6	42890265	42890816	42890265	42890816	-	ENST00000408925.3@C6orf226	ENST00000408925.3	protein_coding	42890265	42890816	Gene ID= ENSG00000221821.3 TPM= 4.25 Transcript Type= protein_coding
chr6	42929172	42939287	42929172	42939287	+	transcript2040.chr6.nnic@CNPY3	transcript2040.chr6.nnic	protein_coding	42929172,42935574,42937717,42938090,42938568	42929721,42935670,42937839,42938207,42939287	Gene ID= ENSG00000137161.16 TPM= 3.19 Transcript Type= NA
chr6	42929123	42936365	42929123	42936365	+	transcript2041.chr6.nnic@CNPY3	transcript2041.chr6.nnic	protein_coding	42929123,42934475,42935412,42935574	42929721,42934598,42935473,42936365	Gene ID= ENSG00000137161.16 TPM= 4.25 Transcript Type= NA
chr6	42929200	42939287	42929200	42939287	+	ENST00000372836.4@CNPY3	ENST00000372836.4	protein_coding	42929200,42934475,42935574,42937717,42938090,42938568	42929721,42934598,42935670,42937839,42938207,42939287	Gene ID= ENSG00000137161.16 TPM= 31.86 Transcript Type= protein_coding
chr6	42960758	42963880	42960758	42963880	+	ENST00000372808.3@GNMT	ENST00000372808.3	protein_coding	42960758,42962212,42962762,42963072,42963328,42963535	42960973,42962339,42962878,42963214,42963449,42963880	Gene ID= ENSG00000124713.5 TPM= 1.06 Transcript Type= protein_coding
chr6	42984499	43012342	42984499	43012342	+	ENST00000485511.5@PPP2R5D	ENST00000485511.5	protein_coding	42984499,42989611,43006463,43006911,43007196,43007414,43007935,43008201,43008367,43008693,43009057,43009322,43010468,43010664,43010881,43011149	42984704,42989688,43006679,43007110,43007306,43007506,43008065,43008260,43008475,43008746,43009227,43009449,43010569,43010736,43010997,43012342	Gene ID= ENSG00000112640.14 TPM= 25.49 Transcript Type= protein_coding
chr6	43006600	43012340	43006600	43012340	+	ENST00000470467.5@PPP2R5D	ENST00000470467.5	protein_coding	43006600,43006911,43007196,43007414,43007935,43008201,43008367,43009057,43009322,43010468,43010664,43010881,43011149	43006679,43007110,43007306,43007506,43008065,43008260,43008475,43009227,43009449,43010569,43010736,43010997,43012340	Gene ID= ENSG00000112640.14 TPM= 11.68 Transcript Type= protein_coding
chr6	43012094	43013968	43012094	43013968	-	ENST00000244711.3@MEA1	ENST00000244711.3	protein_coding	43013786,43013115,43012926,43012094	43013968,43013389,43013028,43012621	Gene ID= ENSG00000124733.3 TPM= 3.19 Transcript Type= protein_coding
chr6	43012234	43013952	43012234	43013952	-	transcript2058.chr6.nnic@MEA1	transcript2058.chr6.nnic	protein_coding	43013898,43013115,43012926,43012234	43013952,43013389,43013028,43012621	Gene ID= ENSG00000124733.3 TPM= 43.55 Transcript Type= NA
chr6	43014213	43021298	43014213	43021298	+	ENST00000326974.8@KLHDC3	ENST00000326974.8	protein_coding	43014213,43017134,43017519,43017853,43018145,43018343,43018633,43018863,43019092,43019288,43020667	43014348,43017346,43017695,43017968,43018216,43018556,43018719,43018971,43019165,43019366,43021298	Gene ID= ENSG00000124702.17 TPM= 217.21 Transcript Type= protein_coding
chr6	43021594	43044511	43021594	43044511	+	transcript2090.chr6.nnic@RRP36	transcript2090.chr6.nnic	protein_coding	43021594,43024985,43025263,43026037,43027178,43027360,43038270,43040557,43043058	43021784,43025132,43025329,43026141,43027252,43027477,43038392,43041124,43044511	Gene ID= ENSG00000124541.6 TPM= 3.19 Transcript Type= NA
chr6	43021594	43031059	43021594	43031059	+	transcript2091.chr6.nnic@RRP36	transcript2091.chr6.nnic	protein_coding	43021594,43024985,43025263,43026037,43027178,43027360,43029092,43030486	43021784,43025132,43025329,43026141,43027252,43027477,43029703,43031059	Gene ID= ENSG00000124541.6 TPM= 2.12 Transcript Type= NA
chr6	43021645	43029597	43021645	43029597	+	ENST00000244496.5@RRP36	ENST00000244496.5	protein_coding	43021645,43024985,43025263,43026037,43027178,43027360,43029092	43021784,43025132,43025329,43026141,43027252,43027477,43029597	Gene ID= ENSG00000124541.6 TPM= 23.37 Transcript Type= protein_coding
chr6	43037620	43053889	43037620	43053889	-	transcript2073.chr6.nic@CUL7	transcript2073.chr6.nic	protein_coding	43053622,43052113,43051612,43050968,43050260,43049963,43049407,43048332,43048148,43046880,43046511,43046236,43045986,43045587,43045227,43044752,43043448,43043074,43042802,43040915,43040530,43040156,43038842,43038566,43038267,43037620	43053889,43052796,43051763,43051468,43050398,43050159,43049662,43048569,43048253,43047107,43046601,43046407,43046091,43045682,43045402,43044885,43043630,43043180,43042984,43041075,43040746,43040426,43038987,43038692,43038472,43038011	Gene ID= ENSG00000044090.8 TPM= 7.44 Transcript Type= NA
chr6	43059632	43075093	43059632	43075093	+	transcript2080.chr6.nic@KLC4	transcript2080.chr6.nic	protein_coding	43059632,43061311,43062917,43065620,43066306,43066996,43070354,43070692,43071275,43071567,43071852,43072147,43072741,43073223,43073902,43074622	43059685,43061593,43063147,43065701,43066525,43067083,43070455,43070865,43071374,43071619,43071922,43072255,43072964,43073338,43073965,43075093	Gene ID= ENSG00000137171.14 TPM= 3.01 Transcript Type= NA
chr6	43059594	43075099	43059594	43075099	+	ENST00000347162.9@KLC4	ENST00000347162.9	protein_coding	43059594,43061311,43062917,43065620,43066306,43066996,43070354,43070692,43071275,43071567,43071852,43072147,43072824,43073223,43073902,43074622	43059685,43061593,43063147,43065701,43066525,43067083,43070455,43070865,43071374,43071619,43071922,43072255,43072964,43073338,43073965,43075099	Gene ID= ENSG00000137171.14 TPM= 20.45 Transcript Type= protein_coding
chr6	43059872	43075093	43059872	43075093	+	transcript2082.chr6.nic@KLC4	transcript2082.chr6.nic	protein_coding	43059872,43061311,43062917,43065620,43066306,43066996,43070354,43070692,43071275,43071567,43071852,43072147,43072824,43073223,43073902,43074622	43060605,43061593,43063147,43065701,43066525,43067083,43070455,43070865,43071374,43071619,43071922,43072255,43072964,43073338,43073965,43075093	Gene ID= ENSG00000137171.14 TPM= 8.32 Transcript Type= NA
chr6	43059883	43075089	43059883	43075089	+	ENST00000479388.5@KLC4	ENST00000479388.5	protein_coding	43059883,43061311,43062917,43065620,43066306,43066996,43070354,43070692,43071275,43071567,43071852,43072147,43072824,43073223,43073902,43074622	43060182,43061593,43063147,43065701,43066525,43067083,43070455,43070865,43071374,43071619,43071922,43072255,43072964,43073338,43073965,43075089	Gene ID= ENSG00000137171.14 TPM= 4.07 Transcript Type= protein_coding
chr6	43059895	43075087	43059895	43075087	+	ENST00000394056.6@KLC4	ENST00000394056.6	protein_coding	43059895,43060518,43061311,43062917,43065620,43066306,43066996,43070354,43070692,43071275,43071567,43071852,43072147,43072824,43073223,43073902,43074622	43060276,43060605,43061593,43063147,43065701,43066525,43067083,43070455,43070865,43071374,43071619,43071922,43072255,43072964,43073338,43073965,43075087	Gene ID= ENSG00000137171.14 TPM= 8.76 Transcript Type= protein_coding
chr6	43054029	43059806	43054029	43059806	-	ENST00000388752.7@MRPL2	ENST00000388752.7	protein_coding	43059286,43058065,43056307,43056081,43055897,43055545,43054029	43059806,43058233,43056445,43056196,43056007,43055618,43054486	Gene ID= ENSG00000112651.11 TPM= 12.75 Transcript Type= protein_coding
chr6	43054232	43059875	43054232	43059875	-	transcript2101.chr6.nnic@MRPL2	transcript2101.chr6.nnic	protein_coding	43059783,43058065,43056307,43056081,43055897,43055545,43054232	43059875,43058233,43056445,43056196,43056007,43055618,43054486	Gene ID= ENSG00000112651.11 TPM= 3.19 Transcript Type= NA
chr6	43057698	43059438	43057698	43059438	-	ENST00000468957.1@MRPL2	ENST00000468957.1	protein_coding	43059286,43057698	43059438,43058233	Gene ID= ENSG00000112651.11 TPM= 7.44 Transcript Type= protein_coding
chr6	43054232	43059394	43054232	43059394	-	ENST00000230413.9@MRPL2	ENST00000230413.9	protein_coding	43059286,43058065,43056307,43056081,43055897,43054232	43059394,43058233,43056445,43056196,43056007,43054486	Gene ID= ENSG00000112651.11 TPM= 3.19 Transcript Type= protein_coding
chr6	43076268	43161719	43076268	43161719	+	ENST00000230419.8@PTK7	ENST00000230419.8	protein_coding	43076268,43128977,43129727,43130230,43130511,43132016,43132421,43138849,43139136,43139406,43141668,43141931,43142172,43143417,43144451,43145200,43146618,43158817,43159788,43160721	43076567,43129264,43129829,43130420,43130661,43132164,43132687,43138982,43139271,43139525,43141817,43142081,43142299,43143620,43144606,43145432,43146698,43158968,43159966,43161719	Gene ID= ENSG00000112655.15 TPM= 3.19 Transcript Type= protein_coding
chr6	43171299	43181507	43171299	43181507	+	ENST00000265354.5@SRF	ENST00000265354.5	protein_coding	43171299,43173847,43175706,43176548,43178294,43178806,43179095	43172169,43174113,43175967,43176667,43178485,43178882,43181507	Gene ID= ENSG00000112658.7 TPM= 47.8 Transcript Type= protein_coding
chr6	43225629	43229484	43225629	43229484	-	ENST00000230431.10@DNPH1	ENST00000230431.10	protein_coding	43229261,43226327,43226033,43225629	43229484,43226395,43226143,43225881	Gene ID= ENSG00000112667.12 TPM= 57.36 Transcript Type= protein_coding
chr6	43225635	43229478	43225635	43229478	-	ENST00000393987.2@DNPH1	ENST00000393987.2	protein_coding	43229261,43226327,43225635	43229478,43226395,43226143	Gene ID= ENSG00000112667.12 TPM= 3.19 Transcript Type= protein_coding
chr6	43305472	43308859	43305472	43308859	-	transcript2114.chr6.nnic@CRIP3	transcript2114.chr6.nnic	protein_coding	43308750,43308315,43307839,43306446,43306219,43306067,43305472	43308859,43308409,43307896,43306517,43306313,43306124,43305875	Gene ID= ENSG00000146215.13 TPM= 4.25 Transcript Type= NA
chr6	43305472	43308797	43305472	43308797	-	ENST00000372569.7@CRIP3	ENST00000372569.7	protein_coding	43308750,43308315,43307839,43307612,43306446,43306219,43306067,43305472	43308797,43308409,43307896,43307743,43306517,43306313,43306124,43305875	Gene ID= ENSG00000146215.13 TPM= 1.06 Transcript Type= protein_coding
chr6	43336844	43339199	43336844	43339199	-	transcript2119.chr6.nnic@NA	transcript2119.chr6.nnic	NA	43336844	43339199	Gene ID= novel_gene_chr6_2120 TPM= 3.19 Transcript Type= NA
chr6	43354176	43369521	43354176	43369521	-	transcript2121.chr6.nic@ZNF318	transcript2121.chr6.nic	protein_coding	43368967,43365292,43357126,43354176	43369521,43365440,43357765,43356145	Gene ID= ENSG00000171467.15 TPM= 2.12 Transcript Type= NA
chr6	43356890	43369311	43356890	43369311	-	transcript2122.chr6.nic@ZNF318	transcript2122.chr6.nic	protein_coding	43368967,43365292,43356890	43369311,43365440,43357765	Gene ID= ENSG00000171467.15 TPM= 2.12 Transcript Type= NA
chr6	43427554	43450430	43427554	43450430	+	ENST00000372530.8@ABCC10	ENST00000372530.8	protein_coding	43427554,43427968,43432142,43434621,43435751,43436138,43437934,43438624,43441862,43442970,43443933,43444159,43444788,43445125,43445599,43446277,43447248,43447684,43448881,43449107,43449422,43449929	43427757,43428139,43433360,43434848,43435907,43436247,43438013,43438795,43441960,43443159,43444010,43444353,43444938,43445314,43445942,43446446,43447408,43447937,43449026,43449204,43449534,43450430	Gene ID= ENSG00000124574.14 TPM= 4.25 Transcript Type= protein_coding
chr6	43450352	43455590	43450352	43455590	-	ENST00000372488.7@DLK2	ENST00000372488.7	protein_coding	43455395,43454750,43454411,43453005,43451940,43450352	43455590,43454880,43454474,43453135,43452084,43451274	Gene ID= ENSG00000171462.14 TPM= 4.25 Transcript Type= protein_coding
chr6	43477573	43506553	43477573	43506553	+	ENST00000372452.5@TJAP1	ENST00000372452.5	protein_coding	43477573,43478087,43497881,43498978,43500744,43501526,43502283,43503401,43503623,43504761	43477628,43478232,43497977,43499100,43500772,43501687,43502349,43503508,43503706,43506553	Gene ID= ENSG00000137221.14 TPM= 24.43 Transcript Type= protein_coding
chr6	43506969	43510686	43506969	43510686	-	ENST00000372441.1@LRRC73	ENST00000372441.1	protein_coding	43509514,43508760,43508298,43507826,43507456,43506969	43510686,43508920,43508420,43507926,43507678,43507308	Gene ID= ENSG00000204052.4 TPM= 3.19 Transcript Type= protein_coding
chr6	43517022	43521526	43517022	43521526	+	ENST00000372389.7@POLR1C	ENST00000372389.7	protein_coding	43517022,43517306,43519333,43519706,43520066,43520275,43520625,43520932,43521182	43517178,43517377,43519440,43519838,43520185,43520427,43520774,43521048,43521526	Gene ID= ENSG00000171453.17 TPM= 5.31 Transcript Type= protein_coding
chr6	43517089	43529585	43517089	43529585	+	ENST00000304004.7@POLR1C	ENST00000304004.7	protein_coding	43517089,43517306,43519333,43519706,43520066,43520275,43520625,43520932,43529249	43517178,43517377,43519440,43519838,43520185,43520427,43520774,43521048,43529585	Gene ID= ENSG00000171453.17 TPM= 3.19 Transcript Type= protein_coding
chr6	43511827	43516990	43511827	43516990	-	ENST00000372422.6@YIPF3	ENST00000372422.6	protein_coding	43516727,43515889,43515595,43513588,43513359,43513069,43512761,43512440,43511827	43516990,43516095,43515701,43513633,43513451,43513200,43512874,43512563,43512315	Gene ID= ENSG00000137207.11 TPM= 112.59 Transcript Type= protein_coding
chr6	43511840	43516985	43511840	43516985	-	ENST00000510102.5@YIPF3	ENST00000510102.5	protein_coding	43516727,43515889,43515606,43513588,43513359,43513069,43512761,43512440,43511840	43516985,43516187,43515701,43513633,43513451,43513200,43512874,43512563,43512315	Gene ID= ENSG00000137207.11 TPM= 9.56 Transcript Type= nonsense_mediated_decay
chr6	43522330	43576075	43522330	43576075	-	ENST00000265351.11@XPO5	ENST00000265351.11	protein_coding	43575760,43573480,43572506,43570857,43570502,43568711,43567169,43565660,43562247,43560924,43560178,43558501,43555836,43553373,43551298,43549893,43549489,43548261,43547608,43546571,43533907,43531479,43530688,43528828,43528159,43527634,43526685,43525839,43525107,43524831,43524471,43522330	43576075,43573601,43572578,43570994,43570684,43568737,43567354,43565736,43562346,43561007,43560303,43558591,43555964,43553503,43551453,43549934,43549578,43548460,43547707,43546752,43534007,43531575,43530824,43528925,43528205,43527731,43526747,43525921,43525214,43524968,43524635,43524005	Gene ID= ENSG00000124571.17 TPM= 2.12 Transcript Type= protein_coding
chr6	43576150	43615660	43576150	43615660	+	ENST00000372236.8@POLH	ENST00000372236.8	protein_coding	43576150,43582316,43583007,43587272,43597696,43600988,43603892,43604615,43605254,43610554,43613660	43576440,43582456,43583141,43587489,43597865,43601091,43604011,43604738,43605319,43610723,43615660	Gene ID= ENSG00000170734.11 TPM= 2.12 Transcript Type= protein_coding
chr6	43620490	43629162	43620490	43629162	-	ENST00000307126.9@GTPBP2	ENST00000307126.9	protein_coding	43628977,43626922,43626226,43625756,43625363,43624888,43624510,43623933,43623737,43622633,43622003,43620490	43629162,43626948,43626410,43625864,43625560,43625062,43624729,43624068,43623795,43622804,43622167,43621790	Gene ID= ENSG00000172432.18 TPM= 9.56 Transcript Type= protein_coding
chr6	43618964	43620522	43618964	43620522	+	transcript2173.chr6.nnic@NA	transcript2173.chr6.nnic	NA	43618964	43620522	Gene ID= novel_gene_chr6_2174 TPM= 3.19 Transcript Type= NA
chr6	43635819	43640952	43635819	43640952	+	ENST00000372171.4@MAD2L1BP	ENST00000372171.4	protein_coding	43635819,43636381,43640021	43635921,43636646,43640952	Gene ID= ENSG00000124688.13 TPM= 37.18 Transcript Type= protein_coding
chr6	43638514	43640940	43638514	43640940	+	transcript2178.chr6.nnic@NA	transcript2178.chr6.nnic	NA	43638514	43640940	Gene ID= novel_gene_chr6_2179 TPM= 2.12 Transcript Type= NA
chr6	43671303	43687791	43671303	43687791	-	ENST00000372133.7@MRPS18A	ENST00000372133.7	protein_coding	43687668,43681089,43678518,43675494,43675202,43671303	43687791,43681120,43678625,43675617,43675271,43671906	Gene ID= ENSG00000096080.11 TPM= 36.11 Transcript Type= protein_coding
chr6	43772871	43786487	43772871	43786487	+	transcript2199.chr6.nnic@VEGFA	transcript2199.chr6.nnic	protein_coding	43772871,43774341,43777469,43778460,43778889,43781956,43784541	43772958,43774392,43777665,43778536,43778918,43782087,43786487	Gene ID= ENSG00000112715.21 TPM= 33.46 Transcript Type= NA
chr6	43770184	43778764	43770184	43778764	+	ENST00000476772.5@VEGFA	ENST00000476772.5	protein_coding	43770184,43774341,43777469,43778460	43771312,43774392,43777665,43778764	Gene ID= ENSG00000112715.21 TPM= 2.12 Transcript Type= retained_intron
chr6	44113694	44127391	44113694	44127391	-	transcript2219.chr6.nnic@MRPL14	transcript2219.chr6.nnic	protein_coding	44127255,44116541,44113694	44127391,44116629,44114209	Gene ID= ENSG00000180992.6 TPM= 7.44 Transcript Type= NA
chr6	44223565	44234141	44223565	44234141	+	ENST00000371740.9@SLC29A1	ENST00000371740.9	protein_coding	44223565,44226061,44227263,44229390,44229589,44229907,44230347,44230568,44230811,44231364,44231998,44232343,44232807,44233417	44223641,44226167,44227342,44229471,44229791,44230046,44230481,44230665,44230889,44231461,44232106,44232428,44233006,44234141	Gene ID= ENSG00000112759.16 TPM= 22.06 Transcript Type= protein_coding
chr6	44219505	44234151	44219505	44234151	+	ENST00000393844.5@SLC29A1	ENST00000393844.5	protein_coding	44219505,44227260,44229390,44229589,44229907,44230347,44230568,44230811,44231364,44231998,44232343,44232807,44233417	44219782,44227342,44229471,44229791,44230046,44230481,44230665,44230889,44231461,44232106,44232428,44233006,44234151	Gene ID= ENSG00000112759.16 TPM= 34.62 Transcript Type= protein_coding
chr6	44226817	44234141	44226817	44234141	+	transcript2240.chr6.nnic@SLC29A1	transcript2240.chr6.nnic	protein_coding	44226817,44227263,44229390,44229589,44229907,44230347,44230568,44230811,44231364,44231998,44232343,44232807,44233417	44227039,44227342,44229471,44229791,44230046,44230481,44230665,44230889,44231461,44232106,44232428,44233006,44234141	Gene ID= ENSG00000112759.16 TPM= 19.94 Transcript Type= NA
chr6	44219548	44234141	44219548	44234141	+	transcript2243.chr6.nic@SLC29A1	transcript2243.chr6.nic	protein_coding	44219548,44227263,44229390,44229589,44229907,44230568,44230811,44231364,44231998,44232343,44232807,44233417	44219782,44227342,44229471,44229791,44230481,44230665,44230889,44231461,44232106,44232428,44233006,44234141	Gene ID= ENSG00000112759.16 TPM= 21.59 Transcript Type= NA
chr6	44219656	44234150	44219656	44234150	+	ENST00000427851.6@SLC29A1	ENST00000427851.6	protein_coding	44219656,44227263,44229390,44229589,44229907,44230347,44230568,44230811,44231364,44231998,44232343,44232807,44233417	44219782,44227342,44229471,44229791,44230046,44230481,44230665,44230889,44231461,44232106,44232428,44233006,44234150	Gene ID= ENSG00000112759.16 TPM= 18.68 Transcript Type= protein_coding
chr6	44223565	44234141	44223565	44234141	+	ENST00000371755.7@SLC29A1	ENST00000371755.7	protein_coding	44223565,44227263,44229390,44229589,44229907,44230347,44230568,44230811,44231364,44231998,44232343,44232807,44233417	44223641,44227342,44229471,44229791,44230046,44230481,44230665,44230889,44231461,44232106,44232428,44233006,44234141	Gene ID= ENSG00000112759.16 TPM= 44.37 Transcript Type= protein_coding
chr6	44227139	44234141	44227139	44234141	+	ENST00000371708.1@SLC29A1	ENST00000371708.1	protein_coding	44227139,44229390,44229589,44229907,44230347,44230568,44230811,44231364,44231998,44232343,44232807,44233417	44227342,44229471,44229791,44230046,44230481,44230665,44230889,44231461,44232106,44232428,44233006,44234141	Gene ID= ENSG00000112759.16 TPM= 30.56 Transcript Type= protein_coding
chr6	44247087	44253883	44247087	44253883	+	ENST00000353801.7@HSP90AB1	ENST00000353801.7	protein_coding	44247087,44248617,44249377,44249675,44250021,44250291,44251048,44251418,44251737,44251999,44253045,44253489	44247195,44248776,44249583,44249834,44250154,44250599,44251213,44251608,44251884,44252267,44253378,44253883	Gene ID= ENSG00000096384.19 TPM= 107.99 Transcript Type= protein_coding
chr6	44247087	44253886	44247087	44253886	+	ENST00000371646.9@HSP90AB1	ENST00000371646.9	protein_coding	44247087,44248630,44249377,44249675,44250021,44250291,44251048,44251418,44251737,44251999,44253045,44253489	44247195,44248776,44249583,44249834,44250154,44250599,44251213,44251608,44251884,44252267,44253378,44253886	Gene ID= ENSG00000096384.19 TPM= 2614.69 Transcript Type= protein_coding
chr6	44254106	44257363	44254106	44257363	-	transcript2297.chr6.nnic@SLC35B2	transcript2297.chr6.nnic	protein_coding	44257178,44256685,44256342,44254106	44257363,44256878,44256496,44255644	Gene ID= ENSG00000157593.18 TPM= 6.46 Transcript Type= NA
chr6	44254106	44257512	44254106	44257512	-	transcript2300.chr6.nic@SLC35B2	transcript2300.chr6.nic	protein_coding	44257400,44256342,44254106	44257512,44256878,44255644	Gene ID= ENSG00000157593.18 TPM= 6.11 Transcript Type= NA
chr6	44254106	44257554	44254106	44257554	-	ENST00000393812.3@SLC35B2	ENST00000393812.3	protein_coding	44257400,44256685,44256342,44254106	44257554,44256878,44256496,44255644	Gene ID= ENSG00000157593.18 TPM= 90.37 Transcript Type= protein_coding
chr6	44254102	44257352	44254102	44257352	-	ENST00000619636.4@SLC35B2	ENST00000619636.4	protein_coding	44257182,44256685,44256342,44254102	44257352,44256878,44256496,44255644	Gene ID= ENSG00000157593.18 TPM= 6.46 Transcript Type= protein_coding
chr6	44258166	44265788	44258166	44265788	-	ENST00000275015.9@NFKBIE	ENST00000275015.9	protein_coding	44264982,44262560,44261626,44260451,44260043,44258166	44265788,44262662,44261848,44260539,44260282,44259284	Gene ID= ENSG00000146232.15 TPM= 1.06 Transcript Type= protein_coding
chr6	44299654	44313326	44299654	44313326	-	ENST00000244571.4@AARS2	ENST00000244571.4	protein_coding	44313081,44312072,44311390,44310994,44310299,44307249,44306923,44306494,44306280,44305653,44305054,44304645,44304420,44304181,44303286,44303066,44302802,44302391,44302060,44301381,44301156,44299654	44313326,44312263,44311535,44311161,44310443,44307394,44307031,44306532,44306391,44305786,44305198,44304817,44304533,44304321,44303423,44303175,44302910,44302513,44302170,44301464,44301266,44300711	Gene ID= ENSG00000124608.4 TPM= 3.19 Transcript Type= protein_coding
chr6	44387525	44450426	44387525	44450426	+	ENST00000371477.3@CDC5L	ENST00000371477.3	protein_coding	44387525,44390268,44392667,44393446,44396341,44403809,44406323,44408444,44419449,44422647,44424419,44426103,44426482,44429713,44445655,44446607	44387868,44390371,44392828,44393573,44396440,44404027,44406467,44408632,44419597,44422809,44424583,44426183,44426724,44429910,44445867,44450426	Gene ID= ENSG00000096401.7 TPM= 5.31 Transcript Type= protein_coding
chr6	44829718	45106006	44829718	45106006	-	transcript2318.chr6.nic@SUPT3H	transcript2318.chr6.nic	protein_coding	45105922,45020546,45014801,45003653,44961753,44954495,44953310,44932653,44829718	45106006,45020632,45014891,45003792,44961828,44954607,44953417,44932763,44829857	Gene ID= ENSG00000196284.15 TPM= 2.12 Transcript Type= NA
chr6	45316170	45316325	45316170	45316325	+	transcript2319.chr6.nnic@NA	transcript2319.chr6.nnic	NA	45316170	45316325	Gene ID= novel_gene_chr6_2320 TPM= 3.19 Transcript Type= NA
chr6	45898456	46015783	45898456	46015783	-	transcript2321.chr6.nic@CLIC5	transcript2321.chr6.nic	protein_coding	46015480,45955135,45949256,45941547,45914228,45902925,45901620,45898456	46015783,45955244,45949381,45941653,45914409,45903255,45901719,45900521	Gene ID= ENSG00000112782.15 TPM= 144.8 Transcript Type= NA
chr6	45911623	46015891	45911623	46015891	-	transcript2322.chr6.nnic@CLIC5	transcript2322.chr6.nnic	protein_coding	46015480,45955135,45949256,45941547,45914228,45913778,45911623	46015891,45955244,45949381,45941653,45914409,45913812,45912739	Gene ID= ENSG00000112782.15 TPM= 6.19 Transcript Type= NA
chr6	45911624	46015889	45911624	46015889	-	ENST00000544153.2@CLIC5	ENST00000544153.2	protein_coding	46015480,45955135,45949256,45941547,45914228,45911624	46015889,45955244,45949381,45941653,45914409,45912739	Gene ID= ENSG00000112782.15 TPM= 6.19 Transcript Type= protein_coding
chr6	45939218	46015798	45939218	46015798	-	transcript2334.chr6.nic@CLIC5	transcript2334.chr6.nic	protein_coding	46015480,45955135,45949256,45939218	46015798,45955244,45949381,45941653	Gene ID= ENSG00000112782.15 TPM= 7.79 Transcript Type= NA
chr6	45901761	46015849	45901761	46015849	-	ENST00000339561.10@CLIC5	ENST00000339561.10	protein_coding	46015480,45955135,45949256,45941547,45914228,45901761	46015849,45955244,45949381,45941653,45914409,45903255	Gene ID= ENSG00000112782.15 TPM= 58.77 Transcript Type= protein_coding
chr6	45959531	45962499	45959531	45962499	+	transcript2342.chr6.nnic@NA	transcript2342.chr6.nnic	NA	45959531	45962499	Gene ID= novel_gene_chr6_2343 TPM= 4.25 Transcript Type= NA
chr6	45963190	45967425	45963190	45967425	-	transcript2348.chr6.nnic@NA	transcript2348.chr6.nnic	NA	45963190	45967425	Gene ID= novel_gene_chr6_2349 TPM= 3.19 Transcript Type= NA
chr6	45994483	45997525	45994483	45997525	+	transcript2340.chr6.nnic@NA	transcript2340.chr6.nnic	NA	45994483	45997525	Gene ID= novel_gene_chr6_2341 TPM= 26.55 Transcript Type= NA
chr6	46129993	46146699	46129993	46146699	+	ENST00000321037.4@ENPP4	ENST00000321037.4	protein_coding	46129993,46139551,46141052,46143276	46130189,46140409,46141222,46146699	Gene ID= ENSG00000001561.6 TPM= 14.87 Transcript Type= protein_coding
chr6	46160415	46170971	46160415	46170971	-	ENST00000230565.3@ENPP5	ENST00000230565.3	protein_coding	46170808,46167434,46165387,46160415	46170971,46168297,46165563,46161753	Gene ID= ENSG00000112796.9 TPM= 4.25 Transcript Type= protein_coding
chr6	46221468	46325672	46221468	46325672	-	ENST00000405162.2@RCAN2	ENST00000405162.2	protein_coding	46325393,46248723,46246748,46223144,46221468	46325672,46248896,46246919,46223301,46223140	Gene ID= ENSG00000172348.14 TPM= 69.04 Transcript Type= protein_coding
chr6	46220736	46325668	46220736	46325668	-	ENST00000330430.10@RCAN2	ENST00000330430.10	protein_coding	46325393,46248723,46246748,46220736	46325668,46248896,46246919,46223301	Gene ID= ENSG00000172348.14 TPM= 588.44 Transcript Type= protein_coding
chr6	46229479	46232716	46229479	46232716	-	transcript2377.chr6.nnic@NA	transcript2377.chr6.nnic	NA	46229479	46232716	Gene ID= novel_gene_chr6_2378 TPM= 4.25 Transcript Type= NA
chr6	46239524	46243830	46239524	46243830	+	transcript2375.chr6.nnic@NA	transcript2375.chr6.nnic	NA	46239524	46243830	Gene ID= novel_gene_chr6_2376 TPM= 19.12 Transcript Type= NA
chr6	46334621	46336965	46334621	46336965	+	transcript2383.chr6.nnic@NA	transcript2383.chr6.nnic	NA	46334621	46336965	Gene ID= novel_gene_chr6_2384 TPM= 6.37 Transcript Type= NA
chr6	46336812	46337159	46336812	46337159	+	transcript2385.chr6.nnic@NA	transcript2385.chr6.nnic	NA	46336812	46337159	Gene ID= novel_gene_chr6_2386 TPM= 2.12 Transcript Type= NA
chr6	46416527	46421312	46416527	46421312	-	transcript2387.chr6.nnic@NA	transcript2387.chr6.nnic	NA	46416527	46421312	Gene ID= novel_gene_chr6_2388 TPM= 2.12 Transcript Type= NA
chr6	46450953	46455567	46450953	46455567	+	transcript2381.chr6.nnic@NA	transcript2381.chr6.nnic	NA	46450953	46455567	Gene ID= novel_gene_chr6_2382 TPM= 10.62 Transcript Type= NA
chr6	46490379	46491017	46490379	46491017	-	transcript2389.chr6.nnic@NA	transcript2389.chr6.nnic	NA	46490379	46491017	Gene ID= novel_gene_chr6_2390 TPM= 2.12 Transcript Type= NA
chr6	46549804	46652785	46549804	46652785	-	transcript2398.chr6.nnic@CYP39A1	transcript2398.chr6.nnic	protein_coding	46652406,46637829,46636389,46630963,46625418,46595987,46588034,46587077,46553767,46549804	46652785,46637978,46636482,46631070,46625508,46596120,46588129,46587165,46553854,46550437	Gene ID= ENSG00000146233.7 TPM= 2.12 Transcript Type= NA
chr6	46549804	46652786	46549804	46652786	-	ENST00000275016.2@CYP39A1	ENST00000275016.2	protein_coding	46652406,46642163,46639494,46637829,46636389,46630963,46625418,46595987,46588034,46587077,46553767,46549804	46652786,46642298,46639668,46637978,46636482,46631070,46625508,46596120,46588129,46587165,46553854,46550437	Gene ID= ENSG00000146233.7 TPM= 5.31 Transcript Type= protein_coding
chr6	46652941	46678193	46652941	46678193	+	ENST00000371347.9@SLC25A27	ENST00000371347.9	protein_coding	46652941,46655843,46658962,46662376,46664774,46668709,46670135,46671126,46676383	46653298,46656034,46659046,46662498,46664886,46668793,46670227,46671228,46678193	Gene ID= ENSG00000153291.15 TPM= 2.12 Transcript Type= protein_coding
chr6	46877255	46880196	46877255	46880196	-	transcript2412.chr6.nic@ADGRF5	transcript2412.chr6.nic	protein_coding	46879818,46877255	46880196,46878405	Gene ID= ENSG00000069122.18 TPM= 2.12 Transcript Type= NA
chr6	46852512	46921977	46852512	46921977	-	ENST00000283296.11@ADGRF5	ENST00000283296.11	protein_coding	46921713,46906661,46900029,46888335,46884095,46883559,46882049,46881455,46879818,46878202,46871843,46868883,46866925,46865042,46862888,46860715,46858129,46856867,46856718,46855974,46852512	46921977,46906786,46900083,46888505,46884271,46883665,46882107,46881597,46880039,46878405,46872013,46869092,46867137,46865197,46863096,46860894,46859523,46856908,46856777,46856058,46854071	Gene ID= ENSG00000069122.18 TPM= 8.5 Transcript Type= protein_coding
chr6	47231532	47309905	47231532	47309905	-	ENST00000296861.2@TNFRSF21	ENST00000296861.2	protein_coding	47309416,47285944,47283938,47253256,47234670,47231532	47309905,47286595,47284432,47253521,47234898,47232994	Gene ID= ENSG00000146072.6 TPM= 8.5 Transcript Type= protein_coding
chr6	49431281	49463266	49431281	49463266	-	transcript2425.chr6.nnic@MUT	transcript2425.chr6.nnic	protein_coding	49463168,49459082,49457691,49456080,49453585,49451466,49448816,49447670,49444639,49441840,49440206,49435456,49431281	49463266,49459505,49458058,49456237,49453756,49451714,49448927,49447785,49444754,49441971,49440353,49435623,49431856	Gene ID= ENSG00000146085.7 TPM= 6.37 Transcript Type= NA
chr6	49430360	49463191	49430360	49463191	-	ENST00000274813.3@MUT	ENST00000274813.3	protein_coding	49463103,49459082,49457691,49456080,49453585,49451466,49448816,49447670,49444639,49441840,49440206,49435456,49430360	49463191,49459505,49458058,49456237,49453756,49451714,49448927,49447785,49444754,49441971,49440353,49435623,49431856	Gene ID= ENSG00000146085.7 TPM= 4.25 Transcript Type= protein_coding
chr6	49463378	49493107	49463378	49493107	+	ENST00000335783.3@CENPQ	ENST00000335783.3	protein_coding	49463378,49470159,49470974,49472063,49472790,49480951,49488352,49488607,49492144	49463453,49470278,49471028,49472183,49472858,49481080,49488471,49488684,49493107	Gene ID= ENSG00000031691.6 TPM= 2.12 Transcript Type= protein_coding
chr6	52264020	52284807	52264020	52284807	-	transcript2434.chr6.nic@MCM3	transcript2434.chr6.nic	protein_coding	52284597,52283294,52282653,52282045,52279361,52278742,52277535,52277067,52276268,52273742,52273230,52272301,52269086,52267865,52266611,52266075,52265235,52264020	52284807,52283406,52282861,52282175,52279599,52278850,52277688,52277198,52276476,52273916,52273356,52272451,52269226,52267968,52266696,52266144,52265385,52264786	Gene ID= ENSG00000112118.18 TPM= 2.47 Transcript Type= NA
chr6	52264014	52284807	52264014	52284807	-	transcript2436.chr6.nnic@MCM3	transcript2436.chr6.nnic	protein_coding	52284597,52283294,52282653,52282045,52279361,52278742,52277535,52277067,52276268,52273742,52273230,52272301,52269086,52267865,52266611,52266075,52264014	52284807,52283406,52282861,52282175,52279599,52278850,52277688,52277198,52276476,52273916,52273356,52272451,52269226,52267968,52266708,52266144,52264786	Gene ID= ENSG00000112118.18 TPM= 2.47 Transcript Type= NA
chr6	52420196	52497190	52420196	52497190	+	ENST00000371068.10@EFHC1	ENST00000371068.10	protein_coding	52420196,52423946,52438304,52452688,52454095,52464895,52469333,52479037,52479640,52490140,52492270	52420473,52424167,52438591,52452837,52454287,52465115,52469473,52479250,52479787,52490350,52497190	Gene ID= ENSG00000096093.15 TPM= 2.12 Transcript Type= protein_coding
chr6	52420278	52492409	52420278	52492409	+	ENST00000635911.1@EFHC1	ENST00000635911.1	protein_coding	52420278,52423687,52423946,52438304,52452688,52464895,52469333,52479037,52479640,52490140,52492270	52420473,52423814,52424167,52438591,52454287,52465115,52469473,52479250,52479787,52490350,52492409	Gene ID= ENSG00000096093.15 TPM= 1.06 Transcript Type= retained_intron
chr6	52497402	52576915	52497402	52576915	-	ENST00000182527.3@TRAM2	ENST00000182527.3	protein_coding	52576796,52535783,52516628,52516006,52509528,52508234,52507553,52506032,52505599,52504591,52497402	52576915,52535846,52516737,52516122,52509586,52508318,52507623,52506136,52505742,52504754,52503270	Gene ID= ENSG00000065308.4 TPM= 11.68 Transcript Type= protein_coding
chr6	52577213	52583993	52577213	52583993	+	transcript2455.chr6.nnic@TRAM2-AS1	transcript2455.chr6.nnic	lincRNA	52577213,52578050,52579375,52582863	52577611,52578393,52579609,52583993	Gene ID= ENSG00000225791.6 TPM= 2.12 Transcript Type= NA
chr6	52577292	52583993	52577292	52583993	+	transcript2458.chr6.nic@TRAM2-AS1	transcript2458.chr6.nic	lincRNA	52577292,52579375,52582863	52578594,52579609,52583993	Gene ID= ENSG00000225791.6 TPM= 2.12 Transcript Type= NA
chr6	52577307	52583993	52577307	52583993	+	ENST00000606714.5@TRAM2-AS1	ENST00000606714.5	lincRNA	52577307,52579375,52582863	52578393,52579609,52583993	Gene ID= ENSG00000225791.6 TPM= 3.19 Transcript Type= lincRNA
chr6	52664431	52669152	52664431	52669152	+	transcript2461.chr6.nnic@AL109918.1	transcript2461.chr6.nnic	transcribed_unprocessed_pseudogene	52664431,52666389,52666749	52665419,52666518,52669152	Gene ID= ENSG00000216775.2 TPM= 3.19 Transcript Type= NA
chr6	52671109	52686588	52671109	52686588	+	ENST00000211314.4@TMEM14A	ENST00000211314.4	protein_coding	52671109,52677087,52681813,52684078,52686010	52671245,52677172,52681914,52684165,52686588	Gene ID= ENSG00000096092.5 TPM= 13.81 Transcript Type= protein_coding
chr6	52977953	52995378	52977953	52995378	-	ENST00000370963.8@GSTA4	ENST00000370963.8	protein_coding	52995249,52994157,52987357,52985451,52984464,52982574,52977953	52995378,52994261,52987408,52985583,52984605,52982705,52978592	Gene ID= ENSG00000170899.10 TPM= 15.93 Transcript Type= protein_coding
chr6	53041136	53061828	53041136	53061828	-	transcript2475.chr6.nic@ICK	transcript2475.chr6.nic	protein_coding	53061596,53041136	53061828,53041408	Gene ID= ENSG00000112144.15 TPM= 2.12 Transcript Type= NA
chr6	53065393	53098373	53065393	53098373	+	transcript2477.chr6.nnic@FBXO9	transcript2477.chr6.nnic	protein_coding	53065393,53071057,53073481,53076486,53078799,53080968,53082504,53092429,53092734,53093466,53093885,53094692,53095513,53097722	53065792,53071143,53073643,53076543,53078898,53081098,53082618,53092547,53092824,53093561,53093978,53094841,53095664,53098373	Gene ID= ENSG00000112146.16 TPM= 3.19 Transcript Type= NA
chr6	53065393	53098373	53065393	53098373	+	transcript2483.chr6.nnic@FBXO9	transcript2483.chr6.nnic	protein_coding	53065393,53071057,53073481,53076486,53078799,53080968,53082504,53092429,53092734,53093885,53095513,53097722	53065792,53071143,53073643,53076543,53078898,53081098,53082618,53092547,53093561,53093978,53095664,53098373	Gene ID= ENSG00000112146.16 TPM= 5.31 Transcript Type= NA
chr6	53065459	53099603	53065459	53099603	+	ENST00000323557.11@FBXO9	ENST00000323557.11	protein_coding	53065459,53071057,53073481,53076486,53078799,53080968,53082504,53092429,53092734,53093466,53093885,53095513,53097722	53065792,53071143,53073639,53076543,53078898,53081098,53082618,53092547,53092824,53093561,53093978,53095664,53099603	Gene ID= ENSG00000112146.16 TPM= 2.12 Transcript Type= protein_coding
chr6	53267398	53349179	53267398	53349179	-	ENST00000542638.5@ELOVL5	ENST00000542638.5	protein_coding	53348817,53295642,53291776,53276179,53275090,53270593,53267398	53349179,53295707,53291963,53276256,53275261,53270727,53269270	Gene ID= ENSG00000012660.13 TPM= 8.5 Transcript Type= protein_coding
chr6	53267399	53349007	53267399	53349007	-	ENST00000304434.10@ELOVL5	ENST00000304434.10	protein_coding	53348817,53295642,53291776,53276179,53275090,53273220,53270593,53267399	53349007,53295707,53291963,53276256,53275261,53273344,53270727,53269270	Gene ID= ENSG00000012660.13 TPM= 43.55 Transcript Type= protein_coding
chr6	53497341	53545129	53497341	53545129	-	ENST00000229416.10@GCLC	ENST00000229416.10	protein_coding	53544496,53522415,53520778,53516109,53514439,53514204,53509176,53508595,53507480,53506913,53505803,53505392,53500432,53500247,53500045,53497341	53545129,53522527,53520960,53516222,53514497,53514337,53509250,53508711,53507618,53507025,53505895,53505496,53500513,53500350,53500165,53498967	Gene ID= ENSG00000001084.10 TPM= 9.56 Transcript Type= protein_coding
chr6	53647901	53665708	53647901	53665708	-	ENST00000370905.3@KLHL31	ENST00000370905.3	protein_coding	53665601,53654101,53647901	53665708,53655305,53652330	Gene ID= ENSG00000124743.5 TPM= 1103.58 Transcript Type= protein_coding
chr6	53794980	53924121	53794980	53924121	+	ENST00000370888.5@LRRC1	ENST00000370888.5	protein_coding	53794980,53842110,53878993,53882887,53896498,53896829,53897285,53899747,53902629,53904379,53913854,53919498,53920625,53922635	53795415,53842227,53879071,53882976,53896554,53896892,53897359,53899891,53902747,53904462,53913969,53919670,53920761,53924121	Gene ID= ENSG00000137269.14 TPM= 4.25 Transcript Type= protein_coding
chr6	54018904	54266280	54018904	54266280	+	transcript2511.chr6.nic@MLIP	transcript2511.chr6.nic	protein_coding	54018904,54121447,54124473,54136715,54149056,54160367,54160516,54160740,54169528,54189870,54202105,54230714,54257308,54265950	54019091,54121602,54124865,54138286,54149127,54160432,54160599,54160799,54169572,54189914,54202233,54230917,54257361,54266280	Gene ID= ENSG00000146147.14 TPM= 29.8 Transcript Type= NA
chr6	54018904	54266280	54018904	54266280	+	transcript2515.chr6.nic@MLIP	transcript2515.chr6.nic	protein_coding	54018904,54121447,54124473,54149056,54160367,54160516,54160740,54169528,54189870,54202105,54257308,54265950	54019091,54121602,54124865,54149127,54160432,54160599,54160799,54169572,54189914,54202233,54257361,54266280	Gene ID= ENSG00000146147.14 TPM= 10.47 Transcript Type= NA
chr6	54018972	54266280	54018972	54266280	+	transcript2517.chr6.nic@MLIP	transcript2517.chr6.nic	protein_coding	54018972,54121447,54124473,54160367,54160516,54160740,54169528,54189870,54202105,54230714,54257308,54265950	54019091,54121602,54124865,54160432,54160599,54160799,54169572,54189914,54202233,54230917,54257361,54266280	Gene ID= ENSG00000146147.14 TPM= 5.37 Transcript Type= NA
chr6	54018904	54266280	54018904	54266280	+	transcript2522.chr6.nic@MLIP	transcript2522.chr6.nic	protein_coding	54018904,54121447,54124473,54149056,54160367,54169528,54189870,54202105,54230714,54257308,54265950	54019091,54121602,54124865,54149127,54160432,54169572,54189914,54202233,54230917,54257361,54266280	Gene ID= ENSG00000146147.14 TPM= 22.37 Transcript Type= NA
chr6	54018904	54266280	54018904	54266280	+	transcript2524.chr6.nic@MLIP	transcript2524.chr6.nic	protein_coding	54018904,54121447,54124473,54149056,54160367,54169528,54189870,54202105,54257308,54265950	54019091,54121602,54124865,54149127,54160432,54169572,54189914,54202233,54257361,54266280	Gene ID= ENSG00000146147.14 TPM= 14.72 Transcript Type= NA
chr6	54018904	54266280	54018904	54266280	+	transcript2532.chr6.nic@MLIP	transcript2532.chr6.nic	protein_coding	54018904,54121447,54124473,54169528,54189870,54202105,54230714,54257308,54265950	54019091,54121602,54124865,54169572,54189914,54202233,54230917,54257361,54266280	Gene ID= ENSG00000146147.14 TPM= 21.31 Transcript Type= NA
chr6	54018918	54266280	54018918	54266280	+	transcript2533.chr6.nic@MLIP	transcript2533.chr6.nic	protein_coding	54018918,54124473,54149056,54160367,54169528,54189870,54202105,54257308,54265950	54019091,54124865,54149127,54160432,54169572,54189914,54202233,54257361,54266280	Gene ID= ENSG00000146147.14 TPM= 7.29 Transcript Type= NA
chr6	54018964	54266280	54018964	54266280	+	transcript2536.chr6.nic@MLIP	transcript2536.chr6.nic	protein_coding	54018964,54121447,54124473,54169528,54189870,54202105,54257308,54265950	54019091,54121602,54124865,54169572,54189914,54202233,54257361,54266280	Gene ID= ENSG00000146147.14 TPM= 11 Transcript Type= NA
chr6	54018916	54266280	54018916	54266280	+	ENST00000274897.9@MLIP	ENST00000274897.9	protein_coding	54018916,54121447,54124473,54149056,54160367,54160516,54160740,54169528,54189870,54202105,54230714,54257308,54265950	54019091,54121602,54124865,54149127,54160432,54160599,54160799,54169572,54189914,54202233,54230917,54257361,54266280	Gene ID= ENSG00000146147.14 TPM= 36.18 Transcript Type= protein_coding
chr6	54018970	54020370	54018970	54020370	+	transcript2554.chr6.nnic@NA	transcript2554.chr6.nnic	NA	54018970	54020370	Gene ID= novel_gene_chr6_2555 TPM= 3.19 Transcript Type= NA
chr6	54025006	54027556	54025006	54027556	-	transcript2558.chr6.nnic@NA	transcript2558.chr6.nnic	NA	54025006	54027556	Gene ID= novel_gene_chr6_2559 TPM= 25.49 Transcript Type= NA
chr6	54133114	54134993	54133114	54134993	+	transcript2556.chr6.nnic@NA	transcript2556.chr6.nnic	NA	54133114	54134993	Gene ID= novel_gene_chr6_2557 TPM= 2.12 Transcript Type= NA
chr6	54141314	54143192	54141314	54143192	-	transcript2560.chr6.nnic@NA	transcript2560.chr6.nnic	NA	54141314	54143192	Gene ID= novel_gene_chr6_2561 TPM= 6.37 Transcript Type= NA
chr6	55753645	55875564	55753645	55875564	-	ENST00000370830.3@BMP5	ENST00000370830.3	protein_coding	55874376,55819655,55794279,55774049,55760457,55759005,55753645	55875564,55819847,55794427,55774243,55760533,55759115,55755682	Gene ID= ENSG00000112175.7 TPM= 2.12 Transcript Type= protein_coding
chr6	56056591	56091700	56056591	56091700	-	transcript2567.chr6.nic@COL21A1	transcript2567.chr6.nic	protein_coding	56091497,56077529,56075479,56074232,56070745,56069046,56067295,56064578,56061649,56060891,56060741,56060018,56059165,56056591	56091700,56077573,56075532,56074285,56070798,56069117,56067330,56064622,56061681,56061037,56060795,56060218,56059242,56057844	Gene ID= ENSG00000124749.16 TPM= 16.2 Transcript Type= NA
chr6	56056591	56091700	56056591	56091700	-	transcript2568.chr6.nnic@COL21A1	transcript2568.chr6.nnic	protein_coding	56091497,56077529,56075479,56074232,56070745,56069046,56064578,56061649,56060891,56060741,56060018,56059165,56056591	56091700,56077573,56075532,56074285,56070798,56069117,56064622,56061681,56061037,56060795,56060218,56059242,56057844	Gene ID= ENSG00000124749.16 TPM= 8.76 Transcript Type= NA
chr6	56056591	56060959	56056591	56060959	-	transcript2570.chr6.nic@COL21A1	transcript2570.chr6.nic	protein_coding	56059165,56056591	56060959,56057844	Gene ID= ENSG00000124749.16 TPM= 4.51 Transcript Type= NA
chr6	56090412	56091663	56090412	56091663	-	transcript2571.chr6.nnic@COL21A1	transcript2571.chr6.nnic	protein_coding	56091497,56090412	56091663,56090913	Gene ID= ENSG00000124749.16 TPM= 2.12 Transcript Type= NA
chr6	56056591	56091661	56056591	56091661	-	ENST00000467045.5@COL21A1	ENST00000467045.5	protein_coding	56091497,56077529,56075479,56074232,56070745,56069046,56067295,56064578,56061649,56060891,56060741,56060018,56059165,56056591	56091661,56077573,56075532,56074285,56070798,56069117,56067330,56064622,56061681,56061035,56060795,56060218,56059242,56057844	Gene ID= ENSG00000124749.16 TPM= 16.2 Transcript Type= processed_transcript
chr6	56611508	56843707	56611508	56843707	-	transcript2574.chr6.nnic@DST	transcript2574.chr6.nnic	protein_coding	56843055,56735228,56704280,56703648,56701888,56699653,56670641,56651132,56650926,56648570,56646087,56645866,56642410,56641947,56640143,56639929,56639696,56639450,56639259,56636557,56635589,56634801,56634462,56634132,56632854,56631883,56631211,56630245,56629250,56627999,56627204,56625157,56624530,56614356,56611508	56843707,56735289,56704369,56703746,56701965,56699745,56670807,56651244,56651032,56648689,56646182,56645993,56642503,56642101,56640605,56640057,56639773,56639611,56639363,56636652,56635714,56634953,56634616,56634258,56633037,56632040,56631389,56630383,56629443,56628161,56627287,56625264,56624628,56614484,56611596	Gene ID= ENSG00000151914.19 TPM= 6.55 Transcript Type= NA
chr6	56611508	56843707	56611508	56843707	-	transcript2575.chr6.nnic@DST	transcript2575.chr6.nnic	protein_coding	56843055,56735228,56704280,56703711,56701888,56699653,56670641,56651132,56650926,56648570,56646087,56645866,56642410,56641947,56640143,56639929,56639696,56639450,56639259,56636557,56635589,56634801,56634462,56634132,56632854,56631883,56631211,56630245,56629250,56627999,56627204,56625157,56624530,56614356,56611508	56843707,56735289,56704369,56703746,56701965,56699745,56670807,56651244,56651032,56648689,56646182,56645993,56642503,56642101,56640605,56640057,56639773,56639611,56639363,56636652,56635714,56634953,56634616,56634258,56633037,56632040,56631389,56630383,56629443,56628161,56627287,56625264,56624628,56614484,56611596	Gene ID= ENSG00000151914.19 TPM= 15.26 Transcript Type= NA
chr6	56611508	56843707	56611508	56843707	-	transcript2576.chr6.nic@DST	transcript2576.chr6.nic	protein_coding	56843055,56735228,56704280,56701888,56699653,56670641,56651132,56650926,56648570,56646087,56645866,56642410,56641947,56640143,56639929,56639696,56639450,56639259,56636557,56635589,56634801,56634462,56634132,56632854,56631883,56631211,56630245,56629250,56627999,56627204,56625157,56624530,56614356,56611508	56843707,56735289,56704369,56701965,56699745,56670807,56651244,56651032,56648689,56646182,56645993,56642503,56642101,56640605,56640057,56639773,56639611,56639363,56636652,56635714,56634953,56634616,56634258,56633037,56632040,56631389,56630383,56629443,56628161,56627287,56625264,56624628,56614484,56611596	Gene ID= ENSG00000151914.19 TPM= 7.25 Transcript Type= NA
chr6	56638089	56843707	56638089	56843707	-	transcript2589.chr6.nnic@DST	transcript2589.chr6.nnic	protein_coding	56843055,56735228,56704280,56703711,56701888,56699653,56670641,56651132,56650926,56648570,56646087,56645866,56642410,56641947,56640143,56639929,56639696,56639450,56638089	56843707,56735289,56704369,56703746,56701965,56699745,56670807,56651244,56651032,56648689,56646182,56645993,56642503,56642101,56640605,56640057,56639773,56639611,56639363	Gene ID= ENSG00000151914.19 TPM= 4.46 Transcript Type= NA
chr6	56458968	56843153	56458968	56843153	-	ENST00000361203.7@DST	ENST00000361203.7	protein_coding	56843055,56735228,56704280,56701888,56699653,56670641,56651132,56650926,56648570,56646087,56645866,56642410,56641947,56640143,56639929,56639696,56639450,56639259,56636557,56635589,56634801,56634462,56634132,56632854,56631883,56631211,56630245,56629250,56627999,56627204,56625157,56624530,56614356,56611508,56610427,56603837,56603564,56603205,56602882,56601443,56600069,56598476,56597740,56593663,56592182,56578814,56573679,56572747,56572100,56569856,56568469,56562138,56561308,56560294,56557319,56555345,56552184,56536779,56535122,56532344,56529974,56528841,56527493,56526361,56517501,56517198,56515450,56511197,56509642,56508529,56506667,56506443,56503997,56501520,56501080,56497856,56497379,56494010,56492934,56492227,56489490,56487104,56485312,56482683,56482050,56477345,56476149,56473873,56472059,56471106,56470128,56469883,56468982,56466078,56464685,56463565,56460131,56458968	56843153,56735289,56704369,56701965,56699745,56670807,56651244,56651032,56648689,56646182,56645993,56642503,56642101,56640605,56640057,56639773,56639611,56639363,56636652,56635714,56634953,56634616,56634258,56633037,56632040,56631389,56630383,56629443,56628161,56627287,56625264,56624628,56614484,56611596,56610562,56609344,56603713,56603420,56603031,56601676,56600221,56598709,56598006,56594193,56592358,56578937,56573887,56573064,56572266,56570012,56568595,56562200,56561549,56560423,56557518,56555840,56553655,56536940,56535292,56532510,56530133,56528925,56527734,56526567,56517620,56517305,56515668,56511400,56509873,56508755,56506789,56506544,56504098,56501693,56501235,56498053,56497507,56494180,56493089,56492433,56489609,56487273,56485471,56482877,56482178,56477488,56476337,56474002,56472222,56471268,56470282,56469957,56468999,56466195,56464756,56463764,56460254,56459267	Gene ID= ENSG00000151914.19 TPM= 12.75 Transcript Type= protein_coding
chr6	56638936	56693303	56638936	56693303	-	ENST00000521104.1@DST	ENST00000521104.1	protein_coding	56692388,56670641,56651132,56650926,56648570,56646087,56645866,56642410,56641947,56640143,56639929,56639696,56639450,56638936	56693303,56670807,56651244,56651032,56648689,56646182,56645993,56642503,56642101,56640605,56640057,56639773,56639611,56639363	Gene ID= ENSG00000151914.19 TPM= 2.12 Transcript Type= retained_intron
chr6	56823604	56825524	56823604	56825524	+	transcript2616.chr6.nnic@NA	transcript2616.chr6.nnic	NA	56823604	56825524	Gene ID= novel_gene_chr6_2617 TPM= 31.86 Transcript Type= NA
chr6	56842050	56843647	56842050	56843647	-	transcript2618.chr6.nnic@NA	transcript2618.chr6.nnic	NA	56842050	56843647	Gene ID= novel_gene_chr6_2619 TPM= 2.12 Transcript Type= NA
chr6	57046532	57055239	57046532	57055239	+	ENST00000545356.5@KIAA1586	ENST00000545356.5	protein_coding	57046532,57047313,57052686	57046776,57047396,57055239	Gene ID= ENSG00000168116.13 TPM= 1.06 Transcript Type= protein_coding
chr6	57046549	57055225	57046549	57055225	+	ENST00000370733.4@KIAA1586	ENST00000370733.4	protein_coding	57046549,57047313,57050774,57052686	57046776,57047396,57050854,57055225	Gene ID= ENSG00000168116.13 TPM= 6.37 Transcript Type= protein_coding
chr6	57090010	57170307	57090010	57170307	+	ENST00000370706.8@ZNF451	ENST00000370706.8	protein_coding	57090010,57090811,57099061,57124734,57128729,57133042,57134744,57141302,57141948,57147090,57150719,57152221,57153861,57161084,57168423	57090274,57090894,57099141,57124859,57128840,57133192,57134870,57141455,57142095,57148693,57150862,57152351,57154047,57161152,57170307	Gene ID= ENSG00000112200.16 TPM= 7.08 Transcript Type= protein_coding
chr6	57090030	57170201	57090030	57170201	+	ENST00000357489.7@ZNF451	ENST00000357489.7	protein_coding	57090030,57090811,57099061,57124734,57128729,57133042,57134744,57141302,57141948,57147090,57152221,57153861,57161084,57168423	57090274,57090894,57099141,57124859,57128840,57133192,57134870,57141455,57142095,57148693,57152351,57154047,57161152,57170201	Gene ID= ENSG00000112200.16 TPM= 1.77 Transcript Type= protein_coding
chr6	57090113	57151371	57090113	57151371	+	ENST00000444273.6@ZNF451	ENST00000444273.6	protein_coding	57090113,57090811,57099061,57124734,57128729,57133042,57134744,57141302,57141948,57147090,57150719	57090274,57090894,57099141,57124859,57128840,57133192,57134870,57141455,57142095,57148693,57151371	Gene ID= ENSG00000112200.16 TPM= 2.84 Transcript Type= retained_intron
chr6	57090076	57109716	57090076	57109716	+	ENST00000370708.8@ZNF451	ENST00000370708.8	protein_coding	57090076,57090811,57099061,57100603	57090274,57090894,57099141,57109716	Gene ID= ENSG00000112200.16 TPM= 11.68 Transcript Type= protein_coding
chr6	57158362	57159484	57158362	57159484	-	transcript2641.chr6.nnic@NA	transcript2641.chr6.nnic	NA	57158362	57159484	Gene ID= novel_gene_chr6_2642 TPM= 2.12 Transcript Type= NA
chr6	57188783	57222305	57188783	57222305	-	transcript2646.chr6.nnic@RAB23	transcript2646.chr6.nnic	protein_coding	57221770,57210226,57207628,57196450,57194770,57193842,57188783	57222305,57210445,57207713,57196606,57194852,57193934,57190600	Gene ID= ENSG00000112210.11 TPM= 3.72 Transcript Type= NA
chr6	57188783	57222325	57188783	57222325	-	transcript2647.chr6.nnic@RAB23	transcript2647.chr6.nnic	protein_coding	57222023,57210226,57207628,57196450,57194770,57193842,57188783	57222325,57210445,57207713,57196606,57194852,57193934,57190600	Gene ID= ENSG00000112210.11 TPM= 3.72 Transcript Type= NA
chr6	57186992	57222304	57186992	57222304	-	transcript2650.chr6.nnic@RAB23	transcript2650.chr6.nnic	protein_coding	57221726,57196450,57194770,57193842,57186992	57222304,57196606,57194852,57193934,57190600	Gene ID= ENSG00000112210.11 TPM= 2.12 Transcript Type= NA
chr6	57186992	57222314	57186992	57222314	-	ENST00000468148.5@RAB23	ENST00000468148.5	protein_coding	57221726,57210226,57207628,57196450,57194770,57193842,57186992	57222314,57210445,57207713,57196606,57194852,57193934,57190600	Gene ID= ENSG00000112210.11 TPM= 8.5 Transcript Type= protein_coding
chr6	57946074	57961501	57946074	57961501	-	ENST00000450081.5@LINC00680	ENST00000450081.5	transcribed_unprocessed_pseudogene	57961321,57961152,57959028,57948918,57946074	57961501,57961224,57959111,57949068,57947177	Gene ID= ENSG00000215190.9 TPM= 1.06 Transcript Type= processed_transcript
chr6	63572012	63583587	63572012	63583587	+	ENST00000370651.5@PTP4A1	ENST00000370651.5	protein_coding	63572012,63576436,63578437,63578898,63579257,63580057	63572719,63576985,63578529,63579028,63579331,63583587	Gene ID= ENSG00000112245.10 TPM= 127.46 Transcript Type= protein_coding
chr6	63635821	63694690	63635821	63694690	+	transcript2682.chr6.nic@PHF3	transcript2682.chr6.nic	protein_coding	63635821,63646527,63680000,63684129,63691737,63694581	63636150,63646795,63680161,63685911,63692043,63694690	Gene ID= ENSG00000118482.11 TPM= 6.37 Transcript Type= NA
chr6	63635802	63694690	63635802	63694690	+	transcript2684.chr6.nic@PHF3	transcript2684.chr6.nic	protein_coding	63635802,63680000,63684129,63691737,63694581	63636150,63680161,63685911,63692043,63694690	Gene ID= ENSG00000118482.11 TPM= 2.12 Transcript Type= NA
chr6	69675857	69796994	69675857	69796994	-	transcript2693.chr6.nnic@LMBRD1	transcript2693.chr6.nnic	protein_coding	69796813,69790296,69780494,69752259,69749341,69748224,69741789,69737942,69718956,69713645,69701889,69701443,69700765,69699043,69697563,69676450,69675857	69796994,69790472,69780554,69752356,69749408,69748289,69741877,69738015,69719081,69713797,69701953,69701545,69700869,69699192,69697641,69676541,69676271	Gene ID= ENSG00000168216.10 TPM= 2.47 Transcript Type= NA
chr6	69675806	69796729	69675806	69796729	-	transcript2694.chr6.nnic@LMBRD1	transcript2694.chr6.nnic	protein_coding	69796414,69790296,69780494,69752259,69749341,69741789,69737942,69718956,69713645,69701889,69701443,69700765,69699043,69697563,69676450,69675806	69796729,69790472,69780554,69752356,69749408,69741877,69738015,69719081,69713797,69701953,69701545,69700869,69699192,69697641,69676541,69676271	Gene ID= ENSG00000168216.10 TPM= 3.54 Transcript Type= NA
chr6	69675802	69797111	69675802	69797111	-	ENST00000370577.7@LMBRD1	ENST00000370577.7	protein_coding	69796813,69790296,69780494,69752259,69749341,69741789,69737942,69718956,69713645,69701889,69701443,69700765,69699043,69697563,69676450,69675802	69797111,69790472,69780554,69752356,69749408,69741877,69738015,69719081,69713797,69701953,69701545,69700869,69699192,69697641,69676541,69676271	Gene ID= ENSG00000168216.10 TPM= 29.74 Transcript Type= protein_coding
chr6	69774384	69777458	69774384	69777458	+	transcript2705.chr6.nnic@NA	transcript2705.chr6.nnic	NA	69774384	69777458	Gene ID= novel_gene_chr6_2706 TPM= 2.12 Transcript Type= NA
chr6	70216032	70283209	70216032	70283209	-	ENST00000320755.11@COL9A1	ENST00000320755.11	protein_coding	70282981,70281390,70281004,70280812,70274719,70274047,70272065,70271655,70270314,70269633,70268804,70266717,70263244,70260657,70256768,70255337,70255150,70254963,70254476,70253385,70252262,70252120,70242662,70241964,70241419,70240689,70239254,70234794,70234539,70232583,70225932,70216032	70283209,70281464,70281039,70280874,70274772,70274082,70272088,70271708,70270367,70269665,70268860,70266770,70263297,70260710,70256821,70255390,70255203,70255016,70254529,70253429,70252315,70252173,70242715,70242035,70241454,70240733,70239286,70234940,70234593,70232771,70226009,70217081	Gene ID= ENSG00000112280.15 TPM= 2.12 Transcript Type= protein_coding
chr6	70413419	70504328	70413419	70504328	+	transcript2722.chr6.nic@FAM135A	transcript2722.chr6.nic	protein_coding	70413419,70415291,70426439,70428304,70452492,70475410,70475663,70477159,70480901,70482001,70486167,70491034,70502636	70413702,70415376,70426532,70428419,70452571,70475549,70475733,70477332,70481027,70482154,70486244,70491083,70504328	Gene ID= ENSG00000082269.16 TPM= 2.12 Transcript Type= NA
chr6	70566909	70589561	70566909	70589561	+	transcript2729.chr6.nnic@SDHAF4	transcript2729.chr6.nnic	protein_coding	70566909,70579414,70588615,70589377	70567004,70579566,70588880,70589561	Gene ID= ENSG00000154079.5 TPM= 3.19 Transcript Type= NA
chr6	70566917	70567659	70566917	70567659	+	ENST00000468640.1@SDHAF4	ENST00000468640.1	protein_coding	70566917,70567416	70567004,70567659	Gene ID= ENSG00000154079.5 TPM= 1.06 Transcript Type= processed_transcript
chr6	70566917	70589569	70566917	70589569	+	ENST00000370474.3@SDHAF4	ENST00000370474.3	protein_coding	70566917,70579414,70588615	70567004,70579566,70589569	Gene ID= ENSG00000154079.5 TPM= 6.37 Transcript Type= protein_coding
chr6	70667776	70862015	70667776	70862015	+	ENST00000370455.7@SMAP1	ENST00000370455.7	protein_coding	70667776,70732378,70754980,70773350,70791689,70798657,70836941,70852540,70856859,70857922,70860200	70668141,70732511,70755065,70773425,70791769,70798737,70837028,70852664,70857030,70858229,70862015	Gene ID= ENSG00000112305.14 TPM= 36.11 Transcript Type= protein_coding
chr6	71288803	71308950	71288803	71308950	+	ENST00000370435.4@OGFRL1	ENST00000370435.4	protein_coding	71288803,71293293,71293533,71296317,71296495,71296672,71301386	71289170,71293379,71293611,71296395,71296561,71296817,71308950	Gene ID= ENSG00000119900.7 TPM= 8.5 Transcript Type= protein_coding
chr6	71373253	71375387	71373253	71375387	-	ENST00000625013.1@AL136164.4	ENST00000625013.1	TEC	71373253	71375387	Gene ID= ENSG00000279312.1 TPM= 1.06 Transcript Type= TEC
chr6	71386852	71390829	71386852	71390829	-	ENST00000624429.1@AL136164.3	ENST00000624429.1	TEC	71386852	71390829	Gene ID= ENSG00000279289.1 TPM= 24.43 Transcript Type= TEC
chr6	71413558	71414509	71413558	71414509	+	transcript2754.chr6.nnic@NA	transcript2754.chr6.nnic	NA	71413558	71414509	Gene ID= novel_gene_chr6_2755 TPM= 2.12 Transcript Type= NA
chr6	73241314	73263184	73241314	73263184	-	ENST00000257765.9@KHDC1	ENST00000257765.9	protein_coding	73262774,73242406,73242055,73241314	73263184,73242530,73242237,73241728	Gene ID= ENSG00000135314.12 TPM= 2.12 Transcript Type= protein_coding
chr6	73263215	73276517	73263215	73276517	+	ENST00000442007.1@AC019205.2	ENST00000442007.1	antisense_RNA	73263215,73270398,73275767	73263416,73270527,73276517	Gene ID= ENSG00000229852.2 TPM= 1.06 Transcript Type= antisense_RNA
chr6	73461737	73501050	73461737	73501050	+	transcript2763.chr6.nic@MTO1	transcript2763.chr6.nic	protein_coding	73461737,73466209,73466489,73473365,73479732,73479936,73480675,73482040,73482449,73492234,73497736,73500574	73461794,73466408,73466606,73473654,73479844,73480126,73480805,73482244,73482620,73492352,73497896,73501050	Gene ID= ENSG00000135297.15 TPM= 6.37 Transcript Type= NA
chr6	73461578	73509236	73461578	73509236	+	ENST00000498286.5@MTO1	ENST00000498286.5	protein_coding	73461578,73466209,73466489,73473365,73479732,73479936,73480675,73482040,73482449,73492234,73497736,73500574	73462071,73466408,73466606,73473654,73479844,73480126,73480805,73482244,73482620,73492352,73497896,73509236	Gene ID= ENSG00000135297.15 TPM= 10.62 Transcript Type= protein_coding
chr6	73517515	73521588	73517515	73521588	-	ENST00000309268.10@EEF1A1	ENST00000309268.10	protein_coding	73521000,73519883,73519337,73518932,73518698,73518354,73518030,73517515	73521588,73520056,73519516,73519228,73518848,73518610,73518264,73517934	Gene ID= ENSG00000156508.17 TPM= 798.74 Transcript Type= protein_coding
chr6	73594024	73653992	73594024	73653992	-	transcript2776.chr6.nnic@SLC17A5	transcript2776.chr6.nnic	protein_coding	73653793,73644407,73642846,73641691,73638412,73636621,73635382,73621804,73615315,73610400,73600351,73594024	73653992,73644603,73642923,73641924,73638499,73636707,73635500,73621962,73615447,73610547,73600441,73595214	Gene ID= ENSG00000119899.12 TPM= 2.12 Transcript Type= NA
chr6	73593379	73654155	73593379	73654155	-	ENST00000355773.5@SLC17A5	ENST00000355773.5	protein_coding	73653793,73644407,73641691,73638412,73636621,73635382,73621804,73615315,73610400,73600351,73593379	73654155,73644603,73641924,73638499,73636707,73635500,73621962,73615447,73610547,73600441,73595214	Gene ID= ENSG00000119899.12 TPM= 2.12 Transcript Type= protein_coding
chr6	73693903	73696131	73693903	73696131	-	ENST00000428865.2@AL590428.1	ENST00000428865.2	antisense_RNA	73695832,73693903	73696131,73695575	Gene ID= ENSG00000231652.2 TPM= 1.06 Transcript Type= antisense_RNA
chr6	75237684	75244009	75237684	75244009	-	ENST00000370089.6@COX7A2	ENST00000370089.6	protein_coding	75243717,75241176,75240301,75237684	75244009,75241265,75240385,75237988	Gene ID= ENSG00000112695.11 TPM= 3.19 Transcript Type= protein_coding
chr6	75237787	75243795	75237787	75243795	-	ENST00000509698.5@COX7A2	ENST00000509698.5	protein_coding	75243717,75241176,75240277,75237787	75243795,75241265,75240385,75237988	Gene ID= ENSG00000112695.11 TPM= 448.76 Transcript Type= protein_coding
chr6	75237823	75243785	75237823	75243785	-	ENST00000472311.6@COX7A2	ENST00000472311.6	protein_coding	75243717,75241176,75237823	75243785,75241265,75237988	Gene ID= ENSG00000112695.11 TPM= 1.06 Transcript Type= protein_coding
chr6	75237787	75243787	75237787	75243787	-	ENST00000459637.2@COX7A2	ENST00000459637.2	protein_coding	75243717,75241123,75240301,75237787	75243787,75241265,75240385,75237988	Gene ID= ENSG00000112695.11 TPM= 1.59 Transcript Type= nonsense_mediated_decay
chr6	75252924	75284968	75252924	75284968	-	ENST00000230461.10@TMEM30A	ENST00000230461.10	protein_coding	75284402,75267641,75265231,75260824,75259347,75258780,75252924	75284968,75267748,75265338,75260911,75259490,75258986,75256295	Gene ID= ENSG00000112697.15 TPM= 25.49 Transcript Type= protein_coding
chr6	75276256	75277325	75276256	75277325	+	transcript2801.chr6.nnic@NA	transcript2801.chr6.nnic	NA	75276256	75277325	Gene ID= novel_gene_chr6_2802 TPM= 2.12 Transcript Type= NA
chr6	75313564	75493797	75313564	75493797	-	transcript2810.chr6.nic@FILIP1	transcript2810.chr6.nic	protein_coding	75493414,75414697,75362744,75353539,75313564	75493797,75414978,75362917,75353717,75315202	Gene ID= ENSG00000118407.14 TPM= 5.66 Transcript Type= NA
chr6	75292630	75294946	75292630	75294946	-	transcript2825.chr6.nnic@NA	transcript2825.chr6.nnic	NA	75292630	75294946	Gene ID= novel_gene_chr6_2826 TPM= 6.37 Transcript Type= NA
chr6	75471940	75476256	75471940	75476256	+	transcript2821.chr6.nnic@NA	transcript2821.chr6.nnic	NA	75471940	75476256	Gene ID= novel_gene_chr6_2822 TPM= 5.31 Transcript Type= NA
chr6	75477281	75479893	75477281	75479893	+	transcript2819.chr6.nnic@NA	transcript2819.chr6.nnic	NA	75477281	75479893	Gene ID= novel_gene_chr6_2820 TPM= 73.29 Transcript Type= NA
chr6	75486964	75488454	75486964	75488454	+	transcript2823.chr6.nnic@NA	transcript2823.chr6.nnic	NA	75486964	75488454	Gene ID= novel_gene_chr6_2824 TPM= 4.25 Transcript Type= NA
chr6	75601844	75715904	75601844	75715904	+	transcript2837.chr6.nic@SENP6	transcript2837.chr6.nic	protein_coding	75601844,75621532,75623900,75633581,75634707,75640687,75647731,75659262,75663221,75666712,75670553,75675435,75675860,75677030,75678583,75678811,75695804,75697425,75702645,75709527,75711328,75713513,75713675,75715385	75602576,75621625,75623960,75633726,75634811,75640704,75647801,75659407,75663518,75666941,75670720,75675468,75676054,75677256,75678692,75678927,75695923,75697517,75703072,75709630,75711416,75713581,75713825,75715904	Gene ID= ENSG00000112701.17 TPM= 15.93 Transcript Type= NA
chr6	75601509	75715904	75601509	75715904	+	ENST00000370010.6@SENP6	ENST00000370010.6	protein_coding	75601509,75621532,75623900,75633581,75634707,75647731,75659262,75663221,75666712,75670553,75675435,75675860,75677030,75678583,75678811,75695804,75697425,75702645,75709527,75711328,75713513,75713675,75715385	75602576,75621625,75623960,75633726,75634811,75647801,75659407,75663518,75666941,75670720,75675468,75676054,75677256,75678692,75678927,75695923,75697517,75703072,75709630,75711416,75713581,75713825,75715904	Gene ID= ENSG00000112701.17 TPM= 11.68 Transcript Type= protein_coding
chr6	75601844	75679867	75601844	75679867	+	transcript2849.chr6.nic@SENP6	transcript2849.chr6.nic	protein_coding	75601844,75621532,75623900,75633581,75634707,75640687,75647731,75659262,75663221,75666712,75670553,75675435,75675860,75677030,75678583,75678811	75602576,75621625,75623960,75633726,75634811,75640704,75647801,75659407,75663518,75666941,75670720,75675468,75676054,75677256,75678692,75679867	Gene ID= ENSG00000112701.17 TPM= 3.19 Transcript Type= NA
chr6	75601927	75678975	75601927	75678975	+	ENST00000327284.12@SENP6	ENST00000327284.12	protein_coding	75601927,75621532,75623900,75633581,75634707,75647731,75659262,75663221,75666712,75670553,75675435,75675860,75677030,75678583,75678811	75602576,75621625,75623960,75633726,75634811,75647801,75659407,75663518,75666941,75670720,75675468,75676054,75677256,75678692,75678975	Gene ID= ENSG00000112701.17 TPM= 1.06 Transcript Type= protein_coding
chr6	75638624	75640212	75638624	75640212	-	transcript2859.chr6.nnic@NA	transcript2859.chr6.nnic	NA	75638624	75640212	Gene ID= novel_gene_chr6_2860 TPM= 10.62 Transcript Type= NA
chr6	75749192	75919537	75749192	75919537	+	ENST00000369981.7@MYO6	ENST00000369981.7	protein_coding	75749192,75817501,75822782,75828540,75830416,75832842,75835901,75840585,75841214,75844897,75848351,75855139,75857097,75858902,75861023,75862596,75866526,75866932,75870647,75873207,75879820,75880043,75881689,75886004,75886844,75890057,75891228,75892530,75894814,75895231,75898373,75907605,75908496,75911672,75914063,75914813	75749423,75817664,75822851,75828613,75830545,75832947,75835956,75840682,75841378,75844977,75848531,75855283,75857254,75858993,75861095,75862723,75866621,75867105,75870685,75873300,75879950,75880120,75881818,75886094,75886994,75890265,75891306,75892693,75894840,75895260,75898411,75907708,75908627,75911698,75914281,75919537	Gene ID= ENSG00000196586.13 TPM= 5.31 Transcript Type= protein_coding
chr6	78982965	79078290	78982965	79078290	-	transcript2874.chr6.nnic@PHIP	transcript2874.chr6.nnic	protein_coding	79078029,79077855,79077700,79077448,79060668,79060478,79042843,79025943,79025519,79019089,79017483,79017346,79016544,79015630,79015082,79004373,79003730,79001899,78998254,78997414,78990868,78988209,78985352,78982965	79078290,79077913,79077729,79077507,79060818,79060576,79043003,79026164,79025619,79019159,79017583,79017386,79016642,79015783,79015216,79004436,79003858,79002124,78998391,78997597,78990985,78988349,78985428,78983117	Gene ID= ENSG00000146247.13 TPM= 4.51 Transcript Type= NA
chr6	78982911	79078290	78982911	79078290	-	transcript2875.chr6.nic@PHIP	transcript2875.chr6.nic	protein_coding	79078029,79077855,79077700,79077448,79060668,79060478,79042843,79025943,79025519,79019089,79017483,79017346,79016544,79015630,79015082,79003730,79001899,78998254,78997414,78990868,78988209,78985352,78982911	79078290,79077913,79077729,79077507,79060818,79060576,79043003,79026164,79025619,79019159,79017583,79017386,79016642,79015783,79015216,79003858,79002124,78998391,78997597,78990985,78988349,78985428,78983117	Gene ID= ENSG00000146247.13 TPM= 8.76 Transcript Type= NA
chr6	79201249	79234738	79201249	79234738	-	ENST00000620514.1@HMGN3	ENST00000620514.1	protein_coding	79234546,79214972,79208547,79203580,79202276,79202063,79201249	79234738,79215022,79208576,79203630,79202389,79202155,79201726	Gene ID= ENSG00000118418.14 TPM= 79.13 Transcript Type= protein_coding
chr6	79201251	79234714	79201251	79234714	-	transcript2892.chr6.nic@HMGN3	transcript2892.chr6.nic	protein_coding	79234546,79214972,79208547,79203580,79202276,79201251	79234714,79215022,79208576,79203630,79202389,79202155	Gene ID= ENSG00000118418.14 TPM= 6.37 Transcript Type= NA
chr6	79201245	79234714	79201245	79234714	-	transcript2896.chr6.nic@HMGN3	transcript2896.chr6.nic	protein_coding	79234546,79214972,79208547,79203580,79201245	79234714,79215022,79208576,79203630,79202389	Gene ID= ENSG00000118418.14 TPM= 16.99 Transcript Type= NA
chr6	79201245	79234714	79201245	79234714	-	transcript2901.chr6.nic@HMGN3	transcript2901.chr6.nic	protein_coding	79234546,79214972,79208547,79201245	79234714,79215022,79208576,79203630	Gene ID= ENSG00000118418.14 TPM= 8.5 Transcript Type= NA
chr6	79201245	79234689	79201245	79234689	-	ENST00000275036.11@HMGN3	ENST00000275036.11	protein_coding	79234546,79214972,79208547,79203580,79202317,79201245	79234689,79215022,79208576,79203630,79202389,79201726	Gene ID= ENSG00000118418.14 TPM= 50.45 Transcript Type= protein_coding
chr6	79201245	79234689	79201245	79234689	-	ENST00000344726.9@HMGN3	ENST00000344726.9	protein_coding	79234546,79214972,79208547,79203580,79202276,79201245	79234689,79215022,79208576,79203630,79202389,79201726	Gene ID= ENSG00000118418.14 TPM= 27.09 Transcript Type= protein_coding
chr6	79233684	79236080	79233684	79236080	+	transcript2904.chr6.nnic@NA	transcript2904.chr6.nnic	NA	79233684	79236080	Gene ID= novel_gene_chr6_2905 TPM= 8.5 Transcript Type= NA
chr6	79631283	79703659	79631283	79703659	+	ENST00000369838.5@SH3BGRL2	ENST00000369838.5	protein_coding	79631283,79673614,79696485,79699498	79631506,79673799,79696565,79703659	Gene ID= ENSG00000198478.7 TPM= 6.37 Transcript Type= protein_coding
chr6	80106636	80346254	80106636	80346254	+	transcript2912.chr6.nnic@BCKDHB	transcript2912.chr6.nnic	protein_coding	80106636,80127547,80129161,80167678,80168875,80169811,80171282,80200934,80203102,80273135,80343664,80345975	80106889,80127624,80129229,80167811,80169030,80169904,80171390,80201031,80203212,80273221,80343812,80346254	Gene ID= ENSG00000083123.14 TPM= 2.12 Transcript Type= NA
chr6	80106647	80346254	80106647	80346254	+	ENST00000356489.9@BCKDHB	ENST00000356489.9	protein_coding	80106647,80127547,80129161,80167678,80168875,80171282,80200934,80203102,80273135,80343664,80345975	80106889,80127624,80129229,80167811,80169030,80171390,80201031,80203212,80273221,80343812,80346254	Gene ID= ENSG00000083123.14 TPM= 15.93 Transcript Type= protein_coding
chr6	80106647	80346270	80106647	80346270	+	ENST00000320393.8@BCKDHB	ENST00000320393.8	protein_coding	80106647,80127547,80129161,80167678,80168875,80171282,80200934,80203102,80273135,80343664	80106889,80127624,80129229,80167811,80169030,80171390,80201031,80203212,80273221,80346270	Gene ID= ENSG00000083123.14 TPM= 14.87 Transcript Type= protein_coding
chr6	81745730	81752708	81745730	81752708	-	ENST00000320172.10@FAM46A	ENST00000320172.10	protein_coding	81752431,81751590,81745730	81752708,81752178,81750471	Gene ID= ENSG00000112773.15 TPM= 11.68 Transcript Type= protein_coding
chr6	81745730	81752708	81745730	81752708	-	ENST00000369754.7@FAM46A	ENST00000369754.7	protein_coding	81752376,81751590,81745730	81752708,81752178,81750471	Gene ID= ENSG00000112773.15 TPM= 16.99 Transcript Type= protein_coding
chr6	81745730	81752774	81745730	81752774	-	ENST00000369756.3@FAM46A	ENST00000369756.3	protein_coding	81752569,81751590,81745730	81752774,81752178,81750471	Gene ID= ENSG00000112773.15 TPM= 13.81 Transcript Type= protein_coding
chr6	81749618	81752734	81749618	81752734	-	transcript2930.chr6.nic@FAM46A	transcript2930.chr6.nic	protein_coding	81751590,81749618	81752734,81750471	Gene ID= ENSG00000112773.15 TPM= 5.31 Transcript Type= NA
chr6	81749618	81752708	81749618	81752708	-	transcript2932.chr6.nic@FAM46A	transcript2932.chr6.nic	protein_coding	81752431,81749618	81752708,81752178	Gene ID= ENSG00000112773.15 TPM= 5.31 Transcript Type= NA
chr6	82214310	82247773	82214310	82247773	-	transcript2940.chr6.nic@IBTK	transcript2940.chr6.nic	protein_coding	82247562,82240166,82234159,82231718,82227192,82225477,82224068,82223440,82220590,82217960,82216076,82214310	82247773,82240843,82234255,82231842,82227302,82225647,82224185,82223620,82220713,82218137,82216250,82214829	Gene ID= ENSG00000005700.14 TPM= 6.37 Transcript Type= NA
chr6	82222106	82225158	82222106	82225158	+	transcript2942.chr6.nnic@NA	transcript2942.chr6.nnic	NA	82222106	82225158	Gene ID= novel_gene_chr6_2943 TPM= 2.12 Transcript Type= NA
chr6	82363206	82367417	82363206	82367417	+	ENST00000535040.4@TPBG	ENST00000535040.4	protein_coding	82363206,82363646,82364623	82363539,82363908,82367417	Gene ID= ENSG00000146242.8 TPM= 10.09 Transcript Type= protein_coding
chr6	82364244	82367417	82364244	82367417	+	ENST00000543496.3@TPBG	ENST00000543496.3	protein_coding	82364244,82364623	82364329,82367417	Gene ID= ENSG00000146242.8 TPM= 2.66 Transcript Type= protein_coding
chr6	82892398	83065841	82892398	83065841	-	ENST00000369747.7@UBE3D	ENST00000369747.7	protein_coding	83065642,83057826,83054148,83044428,83038416,83023969,83022453,83018973,82957312,82892398	83065841,83058022,83054238,83044659,83038485,83024038,83022561,83019136,82957450,82893042	Gene ID= ENSG00000118420.16 TPM= 2.12 Transcript Type= protein_coding
chr6	83067666	83168471	83067666	83168471	+	ENST00000237163.9@DOPEY1	ENST00000237163.9	protein_coding	83067666,83096731,83096925,83100705,83108910,83110125,83113323,83118888,83119775,83120683,83121930,83122863,83124705,83125166,83125500,83128887,83130123,83132176,83134187,83135619,83137173,83140000,83140221,83141921,83145524,83147236,83148759,83151593,83151883,83152288,83153511,83153894,83154180,83155951,83157182,83158567,83159796,83162790,83164660,83167862	83067779,83096823,83097115,83100886,83109080,83110314,83113421,83118987,83119857,83120791,83122050,83122982,83124819,83125195,83125733,83129508,83130397,83132328,83134287,83135878,83139162,83140111,83140403,83142046,83145658,83147291,83148863,83151659,83152027,83152367,83153620,83154043,83154241,83156103,83157318,83158622,83159960,83162919,83164719,83168471	Gene ID= ENSG00000083097.14 TPM= 2.12 Transcript Type= protein_coding
chr6	83164873	83193293	83164873	83193293	-	ENST00000513973.5@PGM3	ENST00000513973.5	protein_coding	83193179,83190809,83188614,83187008,83182845,83181736,83179810,83178673,83175962,83174374,83171937,83170305,83164873	83193293,83191014,83188798,83187075,83182978,83181931,83179967,83178756,83176060,83174487,83172059,83170478,83169323	Gene ID= ENSG00000013375.15 TPM= 1.06 Transcript Type= protein_coding
chr6	83164873	83193293	83164873	83193293	-	ENST00000616566.4@PGM3	ENST00000616566.4	protein_coding	83193179,83188614,83187008,83182845,83181736,83179810,83178673,83175962,83174374,83171937,83170301,83164873	83193293,83188798,83187075,83182978,83181931,83179967,83178756,83176060,83174487,83172059,83170478,83169323	Gene ID= ENSG00000013375.15 TPM= 1.06 Transcript Type= protein_coding
chr6	83193379	83198932	83193379	83198932	+	ENST00000369724.4@RWDD2A	ENST00000369724.4	protein_coding	83193379,83194312,83195595	83193443,83194652,83198932	Gene ID= ENSG00000013392.7 TPM= 1.06 Transcript Type= protein_coding
chr6	83210389	83431071	83210389	83431071	-	ENST00000369705.3@ME1	ENST00000369705.3	protein_coding	83430877,83407768,83398367,83352064,83346173,83315310,83253629,83239539,83237717,83228826,83227335,83223760,83216498,83210389	83431071,83407901,83398516,83352139,83346334,83315413,83253738,83239636,83237830,83228931,83227477,83223933,83216596,83212094	Gene ID= ENSG00000065833.8 TPM= 13.81 Transcript Type= protein_coding
chr6	83512538	83525704	83512538	83525704	+	ENST00000369700.3@PRSS35	ENST00000369700.3	protein_coding	83512538,83523422	83512694,83525704	Gene ID= ENSG00000146250.6 TPM= 3.19 Transcript Type= protein_coding
chr6	83859643	83967424	83859643	83967424	+	ENST00000369681.9@CYB5R4	ENST00000369681.9	protein_coding	83859643,83864175,83893522,83909009,83914416,83918005,83919397,83921082,83922438,83924470,83934595,83936224,83940056,83940515,83955298,83959824	83859857,83864328,83893622,83909090,83914448,83918065,83919454,83921175,83922470,83924592,83934735,83936376,83940206,83940601,83955462,83967424	Gene ID= ENSG00000065615.13 TPM= 8.5 Transcript Type= protein_coding
chr6	84732602	84764519	84732602	84764519	-	ENST00000369663.9@TBX18	ENST00000369663.9	protein_coding	84763890,84762544,84760255,84756698,84747920,84744261,84738497,84732602	84764519,84762748,84760356,84756869,84748087,84744325,84738591,84737409	Gene ID= ENSG00000112837.16 TPM= 1.06 Transcript Type= protein_coding
chr6	85450091	85495778	85450091	85495778	+	ENST00000257770.7@NT5E	ENST00000257770.7	protein_coding	85450091,85467060,85471237,85485235,85487335,85489494,85490508,85491977,85493841	85450478,85467282,85471425,85485432,85487489,85489599,85490657,85492177,85495778	Gene ID= ENSG00000135318.11 TPM= 3.19 Transcript Type= protein_coding
chr6	85449756	85452234	85449756	85452234	+	transcript2990.chr6.nnic@NA	transcript2990.chr6.nnic	NA	85449756	85452234	Gene ID= novel_gene_chr6_2991 TPM= 2.12 Transcript Type= NA
chr6	85505798	85594156	85505798	85594156	-	ENST00000505648.5@SNX14	ENST00000505648.5	protein_coding	85593834,85574258,85572298,85572137,85567534,85565332,85557976,85549723,85548301,85547506,85547317,85547112,85543605,85543182,85541985,85538838,85536792,85533599,85530192,85528262,85526126,85518008,85517756,85514506,85514070,85513800,85507968,85507233,85505798	85594156,85574378,85572374,85572215,85567577,85565419,85558060,85549879,85548376,85547550,85547397,85547226,85543760,85543306,85542043,85538864,85536924,85533800,85530275,85528362,85526237,85518048,85517875,85514629,85514234,85513895,85508059,85507289,85506005	Gene ID= ENSG00000135317.12 TPM= 4.25 Transcript Type= protein_coding
chr6	85505806	85593891	85505806	85593891	-	transcript3001.chr6.nic@SNX14	transcript3001.chr6.nic	protein_coding	85593579,85574258,85572298,85572137,85557976,85549723,85548301,85547506,85547317,85547112,85543605,85543182,85541985,85538838,85536792,85533599,85530192,85528262,85526126,85518008,85517756,85514506,85514070,85513800,85507968,85507233,85505806	85593891,85574378,85572374,85572215,85558060,85549879,85548376,85547550,85547397,85547226,85543760,85543306,85542043,85538864,85536924,85533800,85530275,85528362,85526237,85518048,85517875,85514629,85514234,85513895,85508059,85507289,85506005	Gene ID= ENSG00000135317.12 TPM= 3.19 Transcript Type= NA
chr6	85505499	85593895	85505499	85593895	-	ENST00000314673.7@SNX14	ENST00000314673.7	protein_coding	85593579,85574258,85572298,85572137,85567534,85565332,85557976,85549723,85548301,85547506,85547317,85547112,85543605,85543182,85541985,85538838,85536792,85533599,85530192,85528262,85526126,85518008,85517756,85514506,85514070,85513800,85507968,85507233,85505499	85593895,85574378,85572374,85572215,85567577,85565419,85558060,85549879,85548376,85547550,85547397,85547226,85543760,85543306,85542043,85538864,85536924,85533800,85530275,85528362,85526237,85518048,85517875,85514629,85514234,85513895,85508059,85507289,85506005	Gene ID= ENSG00000135317.12 TPM= 13.81 Transcript Type= protein_coding
chr6	85505802	85593850	85505802	85593850	-	ENST00000369627.6@SNX14	ENST00000369627.6	protein_coding	85593579,85574258,85572298,85572137,85567534,85565332,85557976,85549723,85548301,85547506,85547317,85547112,85543605,85543182,85541985,85536792,85533599,85530192,85528262,85526126,85518008,85517756,85514506,85514070,85513800,85507968,85507233,85505802	85593850,85574378,85572374,85572215,85567577,85565419,85558060,85549879,85548376,85547550,85547397,85547226,85543760,85543306,85542043,85536924,85533800,85530275,85528362,85526237,85518048,85517875,85514629,85514234,85513895,85508059,85507289,85506005	Gene ID= ENSG00000135317.12 TPM= 3.19 Transcript Type= protein_coding
chr6	85611323	85643869	85611323	85643869	-	transcript3017.chr6.nic@SYNCRIP	transcript3017.chr6.nic	protein_coding	85643750,85641292,85640446,85640221,85637243,85636967,85623977,85622482,85619268,85618818,85614981,85611323	85643869,85641451,85640564,85640328,85637356,85637143,85624112,85622687,85619417,85618939,85615347,85612923	Gene ID= ENSG00000135316.17 TPM= 9.56 Transcript Type= NA
chr6	85614106	85643285	85614106	85643285	-	ENST00000369622.7@SYNCRIP	ENST00000369622.7	protein_coding	85642797,85641292,85640446,85640221,85637243,85636967,85623977,85622482,85619268,85618818,85614106	85643285,85641451,85640564,85640328,85637356,85637143,85624112,85622687,85619417,85618939,85615347	Gene ID= ENSG00000135316.17 TPM= 3.19 Transcript Type= protein_coding
chr6	85614214	85643869	85614214	85643869	-	transcript3028.chr6.nic@SYNCRIP	transcript3028.chr6.nic	protein_coding	85643750,85641292,85640446,85640221,85637243,85636967,85623977,85622482,85619268,85618818,85614214	85643869,85641451,85640564,85640328,85637356,85637143,85624112,85622687,85619417,85618939,85615347	Gene ID= ENSG00000135316.17 TPM= 7.44 Transcript Type= NA
chr6	85618861	85642986	85618861	85642986	-	transcript3035.chr6.nic@SYNCRIP	transcript3035.chr6.nic	protein_coding	85642797,85640446,85640221,85637243,85636967,85623977,85622482,85619268,85618861	85642986,85640564,85640328,85637356,85637143,85624112,85622687,85619417,85618939	Gene ID= ENSG00000135316.17 TPM= 3.19 Transcript Type= NA
chr6	85677084	85678733	85677084	85678733	-	ENST00000414002.5@SNHG5	ENST00000414002.5	processed_transcript	85678694,85678136,85677954,85677795,85677424,85677084	85678733,85678188,85678032,85677875,85677492,85677191	Gene ID= ENSG00000203875.10 TPM= 35.05 Transcript Type= lincRNA
chr6	85676990	85678736	85676990	85678736	-	ENST00000369605.8@SNHG5	ENST00000369605.8	processed_transcript	85678136,85677954,85677795,85677424,85676990	85678736,85678032,85677875,85677492,85677191	Gene ID= ENSG00000203875.10 TPM= 4.25 Transcript Type= lincRNA
chr6	85677084	85678737	85677084	85678737	-	transcript3042.chr6.nic@SNHG5	transcript3042.chr6.nic	processed_transcript	85678694,85678136,85677954,85677424,85677084	85678737,85678188,85678032,85677492,85677191	Gene ID= ENSG00000203875.10 TPM= 3.19 Transcript Type= NA
chr6	87155549	87264196	87155549	87264196	+	ENST00000369577.7@ZNF292	ENST00000369577.7	protein_coding	87155549,87215903,87216299,87218596,87233325,87243475,87245503,87254650	87155759,87216057,87216377,87218731,87233527,87243611,87245644,87264196	Gene ID= ENSG00000188994.12 TPM= 4.25 Transcript Type= protein_coding
chr6	87165759	87169420	87165759	87169420	-	transcript3053.chr6.nnic@NA	transcript3053.chr6.nnic	NA	87165759	87169420	Gene ID= novel_gene_chr6_3054 TPM= 2.12 Transcript Type= NA
chr6	87322570	87337318	87322570	87337318	+	transcript3064.chr6.nic@SMIM8	transcript3064.chr6.nic	protein_coding	87322570,87337009	87322632,87337318	Gene ID= ENSG00000111850.10 TPM= 3.19 Transcript Type= NA
chr6	87322593	87342322	87322593	87342322	+	ENST00000229570.9@SMIM8	ENST00000229570.9	protein_coding	87322593,87337009,87340116	87322632,87337166,87342322	Gene ID= ENSG00000111850.10 TPM= 4.25 Transcript Type= protein_coding
chr6	87322597	87432103	87322597	87432103	+	transcript3056.chr6.nnic@CFAP206	transcript3056.chr6.nnic	protein_coding	87322597,87348812,87356301,87371593,87375462,87383586,87391780,87392725,87398243,87409835,87410585,87413810,87415686,87416669,87418208,87426526,87428626,87431033	87322632,87348906,87356503,87371712,87375710,87383760,87391835,87392842,87398377,87409947,87410668,87413900,87415874,87416827,87418416,87426645,87428824,87432103	Gene ID= ENSG00000272514.5 TPM= 2.12 Transcript Type= NA
chr6	87472977	87512336	87472977	87512336	+	ENST00000369552.8@SLC35A1	ENST00000369552.8	protein_coding	87472977,87477362,87500508,87501158,87506382,87508420,87509041,87511399	87473019,87477539,87500667,87501310,87506448,87508596,87509175,87512336	Gene ID= ENSG00000164414.17 TPM= 7.44 Transcript Type= protein_coding
chr6	87514378	87589990	87514378	87589990	-	transcript3079.chr6.nnic@RARS2	transcript3079.chr6.nnic	protein_coding	87589701,87569517,87564130,87562702,87555408,87548591,87545616,87541918,87534735,87530784,87529542,87524557,87521464,87520180,87519583,87518824,87518630,87518169,87516806,87514957,87514378	87589990,87569590,87564232,87562785,87555505,87548646,87545699,87541994,87534858,87530942,87529648,87524652,87521524,87520256,87519707,87518891,87518739,87518264,87516880,87515020,87514499	Gene ID= ENSG00000146282.17 TPM= 6.72 Transcript Type= NA
chr6	87514378	87589990	87514378	87589990	-	transcript3087.chr6.nnic@RARS2	transcript3087.chr6.nnic	protein_coding	87589701,87569517,87564130,87562702,87555408,87548591,87545616,87541918,87530784,87529542,87524557,87521464,87520180,87519583,87518824,87518630,87518169,87516806,87514957,87514378	87589990,87569590,87564232,87562785,87555505,87548646,87545699,87541994,87530942,87529648,87524652,87521524,87520256,87519707,87518891,87518739,87518264,87516880,87515020,87514499	Gene ID= ENSG00000146282.17 TPM= 20 Transcript Type= NA
chr6	87514378	87590003	87514378	87590003	-	ENST00000369536.9@RARS2	ENST00000369536.9	protein_coding	87589922,87569517,87564130,87562702,87555408,87548591,87545616,87541918,87530784,87529542,87524557,87521464,87520180,87519583,87518824,87518630,87518169,87516806,87514957,87514378	87590003,87569590,87564232,87562785,87555505,87548646,87545699,87541994,87530942,87529648,87524652,87521524,87520256,87519707,87518891,87518739,87518264,87516880,87515020,87514499	Gene ID= ENSG00000146282.17 TPM= 13.63 Transcript Type= protein_coding
chr6	87590108	87657771	87590108	87657771	+	transcript3102.chr6.nic@ORC3	transcript3102.chr6.nic	protein_coding	87590108,87594353,87601784,87603384,87605917,87607673,87609096,87612089,87616314,87621354,87621950,87634845,87636407,87653116,87656903	87590192,87594407,87601881,87603528,87606021,87607824,87609229,87612248,87616427,87621487,87622013,87634961,87636486,87653249,87657771	Gene ID= ENSG00000135336.14 TPM= 2.12 Transcript Type= NA
chr6	87590121	87667451	87590121	87667451	+	ENST00000392844.7@ORC3	ENST00000392844.7	protein_coding	87590121,87594353,87601784,87603384,87605917,87607673,87609096,87612089,87616314,87621354,87621950,87634845,87636407,87653116,87656906,87657921,87663003,87664743,87665754,87667018	87590192,87594407,87601881,87603528,87606021,87607824,87609229,87612248,87616427,87621487,87622013,87634961,87636486,87653249,87656982,87658018,87663144,87664859,87665833,87667451	Gene ID= ENSG00000135336.14 TPM= 22.84 Transcript Type= protein_coding
chr6	87590135	87667451	87590135	87667451	+	ENST00000257789.4@ORC3	ENST00000257789.4	protein_coding	87590135,87594353,87601784,87603384,87605917,87607673,87609096,87612089,87616314,87621354,87621950,87634845,87636407,87653116,87656903,87657921,87663003,87664743,87665754,87667018	87590192,87594407,87601881,87603528,87606021,87607824,87609229,87612248,87616427,87621487,87622013,87634961,87636486,87653249,87656982,87658018,87663144,87664859,87665833,87667451	Gene ID= ENSG00000135336.14 TPM= 9.03 Transcript Type= protein_coding
chr6	87692956	87698387	87692956	87698387	+	transcript3110.chr6.nnic@NA	transcript3110.chr6.nnic	NA	87692956	87698387	Gene ID= novel_gene_chr6_3111 TPM= 4.25 Transcript Type= NA
chr6	87698402	87702232	87698402	87702232	-	transcript3112.chr6.nnic@NA	transcript3112.chr6.nnic	NA	87698402	87702232	Gene ID= novel_gene_chr6_3113 TPM= 7.44 Transcript Type= NA
chr6	88610272	88963721	88610272	88963721	-	ENST00000369485.8@RNGTT	ENST00000369485.8	protein_coding	88963346,88941071,88929164,88928985,88906365,88904715,88891806,88890495,88853629,88849755,88844357,88801564,88769774,88678353,88614272,88610272	88963721,88941180,88929267,88929073,88906440,88904955,88891915,88890596,88853764,88849826,88844521,88801632,88769874,88678419,88614395,88612882	Gene ID= ENSG00000111880.15 TPM= 6.37 Transcript Type= protein_coding
chr6	89080751	89084829	89080751	89084829	+	transcript3125.chr6.nnic@PNRC1	transcript3125.chr6.nnic	protein_coding	89080751,89083753	89081197,89084829	Gene ID= ENSG00000146278.10 TPM= 4.25 Transcript Type= NA
chr6	89095959	89118081	89095959	89118081	-	ENST00000452027.2@SRSF12	ENST00000452027.2	protein_coding	89117823,89107154,89105427,89105119,89095959	89118081,89107258,89105530,89105260,89098947	Gene ID= ENSG00000154548.8 TPM= 1.06 Transcript Type= protein_coding
chr6	89146050	89165565	89146050	89165565	+	ENST00000275072.4@PM20D2	ENST00000275072.4	protein_coding	89146050,89149265,89153043,89154748,89158325,89161783,89162109	89146609,89149413,89153185,89154902,89158460,89161890,89165565	Gene ID= ENSG00000146281.5 TPM= 3.19 Transcript Type= protein_coding
chr6	89328073	89352774	89328073	89352774	-	transcript3143.chr6.nnic@UBE2J1	transcript3143.chr6.nnic	protein_coding	89352539,89343683,89342324,89338459,89338205,89335302,89328073	89352774,89343756,89342455,89338543,89338310,89335431,89329957	Gene ID= ENSG00000198833.6 TPM= 4.25 Transcript Type= NA
chr6	89357808	89361099	89357808	89361099	-	transcript3147.chr6.nnic@NA	transcript3147.chr6.nnic	NA	89357808	89361099	Gene ID= novel_gene_chr6_3148 TPM= 6.37 Transcript Type= NA
chr6	89362557	89366542	89362557	89366542	+	transcript3174.chr6.nnic@NA	transcript3174.chr6.nnic	NA	89362557	89366542	Gene ID= novel_gene_chr6_3175 TPM= 29.21 Transcript Type= NA
chr6	89364636	89412270	89364636	89412270	-	ENST00000369415.8@RRAGD	ENST00000369415.8	protein_coding	89411846,89387295,89380168,89379224,89377671,89372437,89364636	89412270,89387590,89380367,89379338,89377813,89372585,89368207	Gene ID= ENSG00000025039.14 TPM= 17.53 Transcript Type= protein_coding
chr6	89632224	89638753	89632224	89638753	-	ENST00000523377.1@LYRM2	ENST00000523377.1	protein_coding	89638672,89637742,89632224	89638753,89637882,89637353	Gene ID= ENSG00000083099.10 TPM= 3.19 Transcript Type= protein_coding
chr6	89637048	89638432	89637048	89638432	-	ENST00000523075.1@LYRM2	ENST00000523075.1	protein_coding	89638272,89637742,89637048	89638432,89637882,89637353	Gene ID= ENSG00000083099.10 TPM= 1.06 Transcript Type= processed_transcript
chr6	89829900	89871412	89829900	89871412	+	ENST00000551025.3@CASP8AP2	ENST00000551025.3	protein_coding	89829900,89846562,89853166,89854817,89855470,89857084,89862126,89865953,89871289	89830106,89846644,89853234,89854917,89855544,89857199,89864371,89869082,89871412	Gene ID= ENSG00000118412.12 TPM= 2.12 Transcript Type= protein_coding
chr6	89829900	89862793	89829900	89862793	+	ENST00000419040.6@CASP8AP2	ENST00000419040.6	protein_coding	89829900,89846562,89853166,89854817,89855470,89857084,89862126	89830067,89846644,89853234,89854917,89855544,89857199,89862793	Gene ID= ENSG00000118412.12 TPM= 1.06 Transcript Type= protein_coding
chr6	89829898	89834084	89829898	89834084	+	transcript3215.chr6.nnic@NA	transcript3215.chr6.nnic	NA	89829898	89834084	Gene ID= novel_gene_chr6_3216 TPM= 4.25 Transcript Type= NA
chr6	89926529	90296908	89926529	90296908	-	ENST00000537989.5@BACH2	ENST00000537989.5	protein_coding	90296480,90206569,90088961,90008602,89950270,89938144,89926529	90296908,90206681,90089109,90008856,89951862,89938350,89932890	Gene ID= ENSG00000112182.14 TPM= 3.19 Transcript Type= protein_coding
chr6	90513583	90587069	90513583	90587069	-	transcript3222.chr6.nnic@MAP3K7	transcript3222.chr6.nnic	protein_coding	90586764,90571697,90568558,90561622,90560076,90556500,90553458,90552049,90550468,90548047,90547258,90536337,90523678,90519258,90518447,90515908,90515041,90513583	90587069,90571807,90568623,90561667,90560214,90556624,90553586,90552179,90550549,90548177,90547387,90536401,90523783,90519319,90518562,90516681,90515092,90513818	Gene ID= ENSG00000135341.17 TPM= 2.12 Transcript Type= NA
chr6	90515634	90587073	90515634	90587073	-	transcript3234.chr6.nnic@MAP3K7	transcript3234.chr6.nnic	protein_coding	90586764,90571697,90568558,90561622,90560076,90556500,90553458,90552049,90550468,90548047,90547258,90536337,90523678,90519258,90518447,90515634	90587073,90571807,90568623,90561667,90560234,90556624,90553586,90552179,90550549,90548177,90547387,90536401,90523783,90519319,90518562,90516681	Gene ID= ENSG00000135341.17 TPM= 3.72 Transcript Type= NA
chr6	90513573	90587045	90513573	90587045	-	ENST00000369332.7@MAP3K7	ENST00000369332.7	protein_coding	90586764,90571697,90568558,90561622,90560076,90556500,90553458,90552049,90550468,90548047,90547258,90536337,90523678,90519258,90518447,90513573	90587045,90571807,90568623,90561667,90560214,90556624,90553586,90552179,90550549,90548177,90547387,90536401,90523783,90519319,90518562,90516681	Gene ID= ENSG00000135341.17 TPM= 9.56 Transcript Type= protein_coding
chr6	95577543	95609457	95577543	95609457	+	ENST00000358812.8@MANEA	ENST00000358812.8	protein_coding	95577543,95586402,95596737,95604827,95605748	95577638,95586983,95596846,95604903,95609457	Gene ID= ENSG00000172469.15 TPM= 3.19 Transcript Type= protein_coding
chr6	96521764	96542942	96521764	96542942	+	transcript3261.chr6.nic@UFL1	transcript3261.chr6.nic	protein_coding	96521764,96523146,96524382,96525297,96526321,96528502,96534263,96536244,96537374,96538631,96540535,96542894	96521950,96523291,96524410,96525394,96526435,96528632,96534321,96536390,96537549,96538810,96540655,96542942	Gene ID= ENSG00000014123.9 TPM= 3.19 Transcript Type= NA
chr6	96521764	96540840	96521764	96540840	+	transcript3263.chr6.nic@UFL1	transcript3263.chr6.nic	protein_coding	96521764,96523146,96524382,96525297,96526321,96528502,96534263,96536244,96537374,96538631,96540535	96521950,96523291,96524410,96525394,96526435,96528632,96534321,96536390,96537549,96538810,96540840	Gene ID= ENSG00000014123.9 TPM= 2.12 Transcript Type= NA
chr6	96521595	96522964	96521595	96522964	+	ENST00000461673.1@UFL1	ENST00000461673.1	protein_coding	96521595,96522863	96521950,96522964	Gene ID= ENSG00000014123.9 TPM= 1.06 Transcript Type= processed_transcript
chr6	96521808	96555276	96521808	96555276	+	ENST00000369278.4@UFL1	ENST00000369278.4	protein_coding	96521808,96523146,96524382,96525297,96526321,96528502,96534263,96536244,96537374,96538631,96540535,96542894,96548164,96549412,96549669,96551433,96551838,96552482,96553285	96521950,96523291,96524410,96525394,96526435,96528632,96534321,96536390,96537549,96538810,96540655,96543016,96548281,96549578,96549799,96551513,96551923,96552662,96555276	Gene ID= ENSG00000014123.9 TPM= 10.62 Transcript Type= protein_coding
chr6	96889313	96897881	96889313	96897881	-	ENST00000316149.7@NDUFAF4	ENST00000316149.7	protein_coding	96897666,96896744,96889313	96897881,96896847,96891391	Gene ID= ENSG00000123545.5 TPM= 29.74 Transcript Type= protein_coding
chr6	98873725	98948006	98873725	98948006	-	ENST00000229971.2@FBXL4	ENST00000229971.2	protein_coding	98947806,98927705,98926477,98917374,98905426,98899268,98880553,98875415,98873725	98948006,98927822,98927060,98917719,98905670,98899481,98880624,98875727,98874441	Gene ID= ENSG00000112234.8 TPM= 3.19 Transcript Type= protein_coding
chr6	99369404	99394226	99369404	99394226	-	transcript3297.chr6.nic@COQ3	transcript3297.chr6.nic	protein_coding	99394074,99383698,99383008,99380189,99377386,99375940,99371428,99369404	99394226,99383824,99383130,99380341,99377485,99376182,99371587,99369820	Gene ID= ENSG00000132423.11 TPM= 2.12 Transcript Type= NA
chr6	99369400	99394204	99369400	99394204	-	ENST00000254759.7@COQ3	ENST00000254759.7	protein_coding	99394074,99383698,99380189,99377386,99375940,99371428,99369400	99394204,99383824,99380341,99377485,99376182,99371587,99369820	Gene ID= ENSG00000132423.11 TPM= 9.56 Transcript Type= protein_coding
chr6	99399969	99425329	99399969	99425329	-	transcript3281.chr6.nnic@PNISR	transcript3281.chr6.nnic	protein_coding	99425215,99416349,99414572,99412551,99410741,99409173,99408081,99406031,99404603,99403829,99402540,99400544,99399969	99425329,99416428,99414690,99412739,99410964,99409344,99408271,99406168,99404702,99403882,99402710,99401630,99400311	Gene ID= ENSG00000132424.14 TPM= 2.12 Transcript Type= NA
chr6	99399964	99425331	99399964	99425331	-	ENST00000438806.5@PNISR	ENST00000438806.5	protein_coding	99425215,99414572,99412551,99410741,99409173,99408081,99406031,99404603,99403829,99402540,99399964	99425331,99414690,99412739,99410964,99409344,99408271,99406168,99404702,99403882,99402710,99401630	Gene ID= ENSG00000132424.14 TPM= 2.12 Transcript Type= protein_coding
chr6	99400887	99425329	99400887	99425329	-	transcript3292.chr6.nic@PNISR	transcript3292.chr6.nic	protein_coding	99425215,99416349,99414572,99412551,99410741,99409173,99408081,99406031,99402540,99400887	99425329,99416428,99414690,99412739,99410964,99409344,99408271,99406168,99404702,99401630	Gene ID= ENSG00000132424.14 TPM= 4.25 Transcript Type= NA
chr6	99482262	99515489	99482262	99515489	-	ENST00000329966.10@USP45	ENST00000329966.10	protein_coding	99515392,99510121,99508610,99507428,99503765,99488681,99488200,99482262	99515489,99510230,99508782,99507531,99503865,99488820,99488295,99482883	Gene ID= ENSG00000123552.17 TPM= 11.68 Transcript Type= protein_coding
chr6	99542380	99568973	99542380	99568973	-	ENST00000520429.5@CCNC	ENST00000520429.5	protein_coding	99568496,99562842,99561597,99561367,99558497,99551840,99550993,99550218,99549508,99546395,99545112,99542380	99568973,99562948,99561681,99561436,99558548,99551895,99551028,99550309,99549575,99546474,99545230,99543609	Gene ID= ENSG00000112237.12 TPM= 19.12 Transcript Type= protein_coding
chr6	99543780	99568662	99543780	99568662	-	ENST00000518714.5@CCNC	ENST00000518714.5	protein_coding	99568496,99562842,99561597,99561367,99558497,99551840,99550993,99550218,99549508,99546395,99545112,99543780	99568662,99562948,99561681,99561436,99558548,99551895,99551028,99550309,99549575,99546474,99545230,99544273	Gene ID= ENSG00000112237.12 TPM= 6.37 Transcript Type= protein_coding
chr6	99566237	99568660	99566237	99568660	-	transcript3333.chr6.nnic@NA	transcript3333.chr6.nnic	NA	99566237	99568660	Gene ID= novel_gene_chr6_3334 TPM= 4.25 Transcript Type= NA
chr6	100508194	100881364	100508194	100881364	-	ENST00000369162.6@ASCC3	ENST00000369162.6	protein_coding	100881061,100867908,100864064,100848148,100805760,100800300,100799431,100798713,100767145,100766565,100725539,100718075,100715462,100679618,100662345,100661806,100655699,100652725,100651560,100650538,100647226,100646615,100644031,100642581,100638601,100631128,100629015,100627842,100627590,100625192,100606951,100606740,100605568,100601810,100589948,100589634,100540163,100517991,100516180,100512709,100509932,100508194	100881364,100868038,100864214,100848707,100805880,100800504,100799572,100798838,100767345,100766705,100725703,100718251,100715533,100679752,100662536,100662030,100655818,100652889,100651646,100650714,100647451,100646769,100644129,100642749,100638821,100631213,100629181,100627987,100627710,100625334,100607088,100606860,100605700,100601935,100590059,100589768,100540387,100518142,100516327,100512918,100510107,100509533	Gene ID= ENSG00000112249.13 TPM= 1.06 Transcript Type= protein_coding
chr6	100676102	100679224	100676102	100679224	+	transcript3336.chr6.nnic@NA	transcript3336.chr6.nnic	NA	100676102	100679224	Gene ID= novel_gene_chr6_3337 TPM= 2.12 Transcript Type= NA
chr6	100856303	100881311	100856303	100881311	-	ENST00000369143.2@ASCC3	ENST00000369143.2	protein_coding	100881061,100867908,100864064,100856303	100881311,100868038,100864214,100859202	Gene ID= ENSG00000112249.13 TPM= 1.06 Transcript Type= protein_coding
chr6	100881471	100882987	100881471	100882987	+	ENST00000565695.2@AL133338.1	ENST00000565695.2	antisense_RNA	100881471	100882987	Gene ID= ENSG00000260000.2 TPM= 3.19 Transcript Type= antisense_RNA
chr6	104728093	104859919	104728093	104859919	-	ENST00000262903.8@HACE1	ENST00000262903.8	protein_coding	104859567,104852317,104850907,104849142,104843223,104833042,104811311,104796929,104796655,104795579,104791504,104784985,104784417,104784086,104777206,104777013,104776741,104771925,104771193,104750341,104744512,104744160,104730303,104728093	104859919,104852371,104850996,104849246,104843298,104833173,104811393,104797025,104796756,104795685,104791654,104785319,104784485,104784173,104777317,104777110,104776828,104772074,104771389,104750472,104744610,104744230,104730416,104729764	Gene ID= ENSG00000085382.11 TPM= 6.37 Transcript Type= protein_coding
chr6	105096822	105137174	105096822	105137174	-	ENST00000314641.9@BVES	ENST00000314641.9	protein_coding	105136969,105133352,105129379,105125391,105124547,105116701,105115686,105096822	105137174,105133588,105129503,105125578,105124655,105116868,105115827,105101213	Gene ID= ENSG00000112276.13 TPM= 33.99 Transcript Type= protein_coding
chr6	105137253	105169941	105137253	105169941	+	transcript3358.chr6.nnic@BVES-AS1	transcript3358.chr6.nnic	antisense_RNA	105137253,105137770,105147276,105168739	105137332,105137923,105147380,105169941	Gene ID= ENSG00000203808.10 TPM= 2.12 Transcript Type= NA
chr6	105158280	105180046	105158280	105180046	-	transcript3355.chr6.nnic@POPDC3	transcript3355.chr6.nnic	protein_coding	105179833,105162587,105161425,105159711,105158280	105180046,105162705,105162160,105159819,105158751	Gene ID= ENSG00000132429.9 TPM= 2.12 Transcript Type= NA
chr6	105158280	105180051	105158280	105180051	-	transcript3365.chr6.nnic@POPDC3	transcript3365.chr6.nnic	protein_coding	105179833,105159711,105158280	105180051,105159819,105158751	Gene ID= ENSG00000132429.9 TPM= 4.25 Transcript Type= NA
chr6	105158280	105179860	105158280	105179860	-	ENST00000254765.3@POPDC3	ENST00000254765.3	protein_coding	105179833,105161425,105159711,105158280	105179860,105162160,105159819,105158751	Gene ID= ENSG00000132429.9 TPM= 6.37 Transcript Type= protein_coding
chr6	105158360	105179995	105158360	105179995	-	ENST00000474760.1@POPDC3	ENST00000474760.1	protein_coding	105179833,105161796,105159711,105158360	105179995,105162160,105159819,105158751	Gene ID= ENSG00000132429.9 TPM= 2.12 Transcript Type= processed_transcript
chr6	105172900	105175389	105172900	105175389	+	transcript3366.chr6.nnic@NA	transcript3366.chr6.nnic	NA	105172900	105175389	Gene ID= novel_gene_chr6_3367 TPM= 4.25 Transcript Type= NA
chr6	105322255	105403102	105322255	105403102	-	transcript3373.chr6.nic@PREP	transcript3373.chr6.nic	protein_coding	105402847,105397853,105377386,105376125,105373369,105368903,105352972,105333314,105328829,105323665,105322255	105403102,105397927,105377519,105376255,105373578,105369024,105353077,105333505,105329026,105323768,105323111	Gene ID= ENSG00000085377.13 TPM= 4.25 Transcript Type= NA
chr6	106184476	106325791	106184476	106325791	-	ENST00000369076.7@ATG5	ENST00000369076.7	protein_coding	106325526,106316101,106308364,106293028,106279661,106248150,106201972,106184476	106325791,106316266,106308491,106293106,106279823,106248244,106202089,106186676	Gene ID= ENSG00000057663.14 TPM= 8.5 Transcript Type= protein_coding
chr6	106571971	106629487	106571971	106629487	-	ENST00000369063.7@RTN4IP1	ENST00000369063.7	protein_coding	106628748,106622818,106621425,106619202,106602874,106592164,106587679,106583328,106571971	106629487,106622969,106621493,106619326,106602922,106592300,106587862,106583420,106572103	Gene ID= ENSG00000130347.12 TPM= 14.87 Transcript Type= protein_coding
chr6	106629566	106666361	106629566	106666361	+	transcript3394.chr6.nnic@QRSL1	transcript3394.chr6.nnic	protein_coding	106629566,106640823,106642994,106649025,106652209,106652467,106654730,106655615,106662980,106665782	106629705,106640921,106643090,106649201,106652384,106652582,106654922,106655732,106663185,106666361	Gene ID= ENSG00000130348.11 TPM= 15.93 Transcript Type= NA
chr6	107028340	107051342	107028340	107051342	+	transcript3400.chr6.nnic@C6orf203	transcript3400.chr6.nnic	protein_coding	107028340,107030025,107039749,107044260,107051057	107028924,107030107,107040230,107044332,107051342	Gene ID= ENSG00000130349.9 TPM= 3.19 Transcript Type= NA
chr6	107028213	107051342	107028213	107051342	+	ENST00000311381.7@C6orf203	ENST00000311381.7	protein_coding	107028213,107039749,107044260,107051057	107028271,107040230,107044332,107051342	Gene ID= ENSG00000130349.9 TPM= 40.89 Transcript Type= protein_coding
chr6	107028569	107051335	107028569	107051335	+	ENST00000625458.1@C6orf203	ENST00000625458.1	protein_coding	107028569,107030025,107039749,107044260,107051057	107028797,107030107,107040230,107044332,107051335	Gene ID= ENSG00000130349.9 TPM= 2.66 Transcript Type= protein_coding
chr6	107152557	107459563	107152557	107459563	-	ENST00000369037.8@PDSS2	ENST00000369037.8	protein_coding	107458990,107334198,107274029,107245548,107212109,107210439,107193822,107152557	107459563,107334332,107274227,107245619,107212282,107210570,107193854,107154777	Gene ID= ENSG00000164494.11 TPM= 24.43 Transcript Type= protein_coding
chr6	107264186	107459564	107264186	107459564	-	ENST00000369031.4@PDSS2	ENST00000369031.4	protein_coding	107458990,107334198,107274029,107264186	107459564,107334332,107274227,107264512	Gene ID= ENSG00000164494.11 TPM= 5.31 Transcript Type= protein_coding
chr6	107489958	107660167	107489958	107660167	+	ENST00000317357.9@SOBP	ENST00000317357.9	protein_coding	107489958,107503657,107506242,107533459,107587080,107633514,107658207	107490712,107503795,107506427,107533610,107587175,107635469,107660167	Gene ID= ENSG00000112320.11 TPM= 9.56 Transcript Type= protein_coding
chr6	107490045	107659484	107490045	107659484	+	transcript3420.chr6.nnic@SOBP	transcript3420.chr6.nnic	protein_coding	107490045,107503657,107506242,107533459,107587080,107658207	107490712,107503795,107506427,107533610,107587175,107659484	Gene ID= ENSG00000112320.11 TPM= 7.44 Transcript Type= NA
chr6	107659933	107660114	107659933	107660114	+	transcript3430.chr6.nnic@NA	transcript3430.chr6.nnic	NA	107659933	107660114	Gene ID= novel_gene_chr6_3431 TPM= 4.25 Transcript Type= NA
chr6	107882987	107958208	107882987	107958208	-	transcript3437.chr6.nic@SEC63	transcript3437.chr6.nic	protein_coding	107957886,107929415,107924818,107921797,107913366,107912716,107911346,107908927,107906683,107906448,107904629,107902844,107901370,107897649,107893838,107893482,107882987	107958208,107929514,107924932,107921909,107913427,107912774,107911396,107909035,107906777,107906580,107904721,107902998,107901517,107897731,107893897,107893655,107883146	Gene ID= ENSG00000025796.13 TPM= 3.19 Transcript Type= NA
chr6	107893570	107958142	107893570	107958142	-	transcript3441.chr6.nnic@SEC63	transcript3441.chr6.nnic	protein_coding	107957886,107924818,107921797,107913366,107912716,107911346,107908927,107906683,107906448,107904629,107902844,107901370,107897649,107893838,107893570	107958142,107924932,107921909,107913427,107912774,107911396,107909035,107906777,107906580,107904721,107902998,107901517,107897731,107893897,107893655	Gene ID= ENSG00000025796.13 TPM= 2.66 Transcript Type= NA
chr6	107867756	107958189	107867756	107958189	-	ENST00000369002.8@SEC63	ENST00000369002.8	protein_coding	107957886,107929415,107924818,107921797,107913366,107912716,107911346,107908927,107906683,107906448,107904629,107902844,107901370,107897649,107893838,107893482,107882988,107881149,107876564,107872808,107867756	107958189,107929514,107924932,107921909,107913427,107912774,107911396,107909035,107906777,107906580,107904721,107902998,107901517,107897731,107893897,107893655,107883146,107881250,107876662,107872912,107871847	Gene ID= ENSG00000025796.13 TPM= 6.37 Transcript Type= protein_coding
chr6	108042818	108074790	108042818	108074790	-	transcript3446.chr6.nic@OSTM1	transcript3446.chr6.nic	protein_coding	108074250,108064185,108054490,108051031,108049532,108049253,108042818	108074790,108064299,108054587,108051198,108049583,108049418,108044840	Gene ID= ENSG00000081087.14 TPM= 7.44 Transcript Type= NA
chr6	108211222	108261260	108211222	108261260	-	ENST00000230085.12@SNX3	ENST00000230085.12	protein_coding	108260760,108222950,108214498,108211222	108261260,108223045,108214622,108212254	Gene ID= ENSG00000112335.14 TPM= 78.6 Transcript Type= protein_coding
chr6	108559762	108665829	108559762	108665829	+	transcript3479.chr6.nic@FOXO3	transcript3479.chr6.nic	protein_coding	108559762,108561086,108663455	108560015,108561829,108665829	Gene ID= ENSG00000118689.14 TPM= 9.56 Transcript Type= NA
chr6	108560837	108665829	108560837	108665829	+	transcript3486.chr6.nic@FOXO3	transcript3486.chr6.nic	protein_coding	108560837,108663455	108561829,108665829	Gene ID= ENSG00000118689.14 TPM= 9.56 Transcript Type= NA
chr6	108848740	108869600	108848740	108869600	+	transcript3492.chr6.nic@ARMC2	transcript3492.chr6.nic	protein_coding	108848740,108854225,108858199,108868824	108848821,108854485,108858271,108869600	Gene ID= ENSG00000118690.12 TPM= 2.12 Transcript Type= NA
chr6	108883070	108884036	108883070	108884036	+	transcript3493.chr6.nnic@NA	transcript3493.chr6.nnic	NA	108883070	108884036	Gene ID= novel_gene_chr6_3494 TPM= 2.12 Transcript Type= NA
chr6	108986442	109009555	108986442	109009555	-	ENST00000356644.7@SESN1	ENST00000356644.7	protein_coding	109009359,109002278,109001288,109000491,108998513,108994462,108992787,108990645,108988543,108986442	109009555,109002343,109001488,109000673,108998755,108994609,108992899,108990835,108988687,108987630	Gene ID= ENSG00000080546.13 TPM= 21.24 Transcript Type= protein_coding
chr6	108986437	109094819	108986437	109094819	-	ENST00000436639.6@SESN1	ENST00000436639.6	protein_coding	109093795,109002278,109001288,109000491,108998513,108994462,108992787,108990645,108988543,108986437	109094819,109002343,109001488,109000673,108998755,108994609,108992899,108990835,108988687,108987630	Gene ID= ENSG00000080546.13 TPM= 43.55 Transcript Type= protein_coding
chr6	109066314	109070214	109066314	109070214	-	transcript3500.chr6.nnic@NA	transcript3500.chr6.nnic	NA	109066314	109070214	Gene ID= novel_gene_chr6_3501 TPM= 2.12 Transcript Type= NA
chr6	109089061	109094459	109089061	109094459	-	transcript3498.chr6.nnic@NA	transcript3498.chr6.nnic	NA	109089061	109094459	Gene ID= novel_gene_chr6_3499 TPM= 4.25 Transcript Type= NA
chr6	109095153	109163932	109095153	109163932	+	ENST00000517392.5@CEP57L1	ENST00000517392.5	protein_coding	109095153,109145219,109146758,109150118,109153833,109155230,109155791,109159025,109159269,109160572,109162749	109095575,109145381,109146937,109150239,109153949,109155307,109155877,109159102,109159462,109160716,109163932	Gene ID= ENSG00000183137.14 TPM= 1.06 Transcript Type= protein_coding
chr6	109366518	109382444	109366518	109382444	-	ENST00000310786.8@CD164	ENST00000310786.8	protein_coding	109382204,109379579,109377900,109376074,109370411,109366518	109382444,109379662,109377971,109376112,109370467,109369017	Gene ID= ENSG00000135535.15 TPM= 226.24 Transcript Type= protein_coding
chr6	109366518	109382444	109366518	109382444	-	ENST00000324953.9@CD164	ENST00000324953.9	protein_coding	109382204,109379579,109377900,109376074,109366518	109382444,109379662,109377971,109376112,109369017	Gene ID= ENSG00000135535.15 TPM= 6.37 Transcript Type= protein_coding
chr6	109374433	109377658	109374433	109377658	+	transcript3522.chr6.nnic@NA	transcript3522.chr6.nnic	NA	109374433	109377658	Gene ID= novel_gene_chr6_3523 TPM= 2.12 Transcript Type= NA
chr6	109390215	109441171	109390215	109441171	-	ENST00000521072.6@PPIL6	ENST00000521072.6	protein_coding	109440456,109436104,109431157,109427094,109426847,109419187,109400035,109390215	109441171,109436199,109431345,109427156,109426994,109419243,109400170,109392937	Gene ID= ENSG00000185250.15 TPM= 2.12 Transcript Type= protein_coding
chr6	109440763	109443919	109440763	109443919	+	ENST00000258052.7@SMPD2	ENST00000258052.7	protein_coding	109440763,109441357,109441552,109441974,109442210,109442543,109442752,109442977,109443267,109443517	109441171,109441453,109441628,109442067,109442299,109442625,109442884,109443081,109443420,109443919	Gene ID= ENSG00000135587.8 TPM= 14.87 Transcript Type= protein_coding
chr6	109444062	109455987	109444062	109455987	-	ENST00000358807.7@MICAL1	ENST00000358807.7	protein_coding	109455719,109453939,109453638,109453263,109452511,109452246,109451600,109450300,109449970,109449657,109449400,109448732,109448203,109447875,109447681,109447357,109447073,109446696,109446136,109445771,109445416,109445197,109444896,109444725,109444062	109455987,109454239,109453845,109453367,109452615,109452401,109451700,109450557,109450085,109449783,109449481,109448879,109448393,109447963,109447722,109447440,109447229,109446772,109446412,109445862,109445529,109445290,109444995,109444798,109444339	Gene ID= ENSG00000135596.17 TPM= 3.72 Transcript Type= protein_coding
chr6	109444062	109455742	109444062	109455742	-	ENST00000358577.7@MICAL1	ENST00000358577.7	protein_coding	109455719,109453939,109453638,109453263,109452511,109452246,109451600,109449970,109449657,109449400,109448732,109448203,109447875,109447681,109447357,109447073,109446696,109446136,109445771,109445416,109445197,109444896,109444725,109444062	109455742,109454239,109453845,109453367,109452615,109452401,109451700,109450085,109449783,109449481,109448879,109448393,109447963,109447722,109447440,109447229,109446772,109446412,109445862,109445529,109445290,109444995,109444798,109444339	Gene ID= ENSG00000135596.17 TPM= 2.66 Transcript Type= protein_coding
chr6	109462594	109483237	109462594	109483237	-	ENST00000230122.3@ZBTB24	ENST00000230122.3	protein_coding	109483098,109481075,109476763,109476175,109475399,109467653,109462594	109483237,109482054,109476930,109476258,109475482,109467734,109466574	Gene ID= ENSG00000112365.4 TPM= 1.06 Transcript Type= protein_coding
chr6	109631693	109691217	109631693	109691217	-	ENST00000285397.9@AK9	ENST00000285397.9	protein_coding	109691147,109675629,109674198,109672115,109671919,109662551,109659228,109656756,109644614,109641518,109633184,109631693	109691217,109675756,109674261,109672167,109672015,109662663,109659413,109656884,109644688,109641616,109633323,109633103	Gene ID= ENSG00000155085.15 TPM= 6.37 Transcript Type= protein_coding
chr6	109691312	109825428	109691312	109825428	+	ENST00000230124.7@FIG4	ENST00000230124.7	protein_coding	109691312,109715078,109716445,109727109,109732637,109735150,109738325,109741444,109743110,109743675,109760250,109762091,109763937,109765013,109766729,109776922,109784970,109786302,109789594,109791376,109792582,109796765,109825088	109691501,109715176,109716568,109727265,109732687,109735298,109738453,109741544,109743272,109743772,109760383,109762207,109763982,109765161,109766895,109777060,109785028,109786449,109789677,109791571,109792664,109796851,109825428	Gene ID= ENSG00000112367.10 TPM= 14.87 Transcript Type= protein_coding
chr6	110180141	110232223	110180141	110232223	+	ENST00000368932.5@CDC40	ENST00000368932.5	protein_coding	110180141,110180384,110193182,110201558,110207506,110209084,110210707,110212133,110213086,110215286,110217702,110219364,110219736,110226167,110228832,110229954	110180180,110180633,110193268,110201687,110207589,110209223,110210803,110212272,110213160,110215331,110217803,110219479,110219869,110226243,110228976,110232223	Gene ID= ENSG00000168438.14 TPM= 10.09 Transcript Type= protein_coding
chr6	110391771	110415562	110391771	110415562	-	ENST00000368923.7@DDO	ENST00000368923.7	protein_coding	110415467,110413291,110408334,110391771	110415562,110413466,110408442,110393342	Gene ID= ENSG00000203797.9 TPM= 4.25 Transcript Type= protein_coding
chr6	110391771	110415562	110391771	110415562	-	ENST00000368924.7@DDO	ENST00000368924.7	protein_coding	110415467,110413291,110408334,110404774,110391771	110415562,110413466,110408442,110404950,110393342	Gene ID= ENSG00000203797.9 TPM= 3.19 Transcript Type= protein_coding
chr6	110874770	110895713	110874770	110895713	+	ENST00000368885.7@AMD1	ENST00000368885.7	protein_coding	110874770,110887505,110888857,110890254,110892161,110892299,110892735,110892910,110893476	110875215,110887591,110888983,110890356,110892203,110892443,110892827,110893065,110895713	Gene ID= ENSG00000123505.15 TPM= 39.3 Transcript Type= protein_coding
chr6	110958560	110967890	110958560	110967890	+	ENST00000329970.7@GTF3C6	ENST00000329970.7	protein_coding	110958560,110959172,110960414,110960572,110962392,110967510	110958826,110959252,110960477,110960616,110962505,110967890	Gene ID= ENSG00000155115.6 TPM= 160.39 Transcript Type= protein_coding
chr6	110982015	111026100	110982015	111026100	+	ENST00000441448.6@RPF2	ENST00000441448.6	protein_coding	110982015,110985006,110989028,110991747,110997183,110999711,111008038,111015754,111024183,111025403	110982129,110985138,110989065,110991786,110997264,110999787,111008137,111015856,111024327,111026100	Gene ID= ENSG00000197498.12 TPM= 29.74 Transcript Type= protein_coding
chr6	111087578	111223020	111087578	111223020	+	ENST00000368851.9@SLC16A10	ENST00000368851.9	protein_coding	111087578,111172695,111177212,111206592,111218814,111222003	111088095,111172839,111177665,111206735,111219042,111223020	Gene ID= ENSG00000112394.16 TPM= 2.12 Transcript Type= protein_coding
chr6	111275411	111279099	111275411	111279099	-	transcript3587.chr6.nnic@NA	transcript3587.chr6.nnic	NA	111275411	111279099	Gene ID= novel_gene_chr6_3588 TPM= 6.37 Transcript Type= NA
chr6	111374738	111483218	111374738	111483218	-	transcript3592.chr6.nic@REV3L	transcript3592.chr6.nic	protein_coding	111482750,111416283,111411480,111405470,111392876,111390086,111389106,111388001,111387765,111381325,111379982,111377701,111374738	111483218,111416472,111411554,111405630,111392972,111390180,111389210,111388085,111387913,111381444,111380219,111377843,111376757	Gene ID= ENSG00000009413.15 TPM= 3.19 Transcript Type= NA
chr6	111386718	111483227	111386718	111483227	-	transcript3598.chr6.nic@REV3L	transcript3598.chr6.nic	protein_coding	111482750,111416283,111411480,111405470,111392876,111390086,111389106,111388001,111386718	111483227,111416472,111411554,111405630,111392972,111390180,111389210,111388085,111387913	Gene ID= ENSG00000009413.15 TPM= 5.31 Transcript Type= NA
chr6	111483516	111503608	111483516	111503608	+	ENST00000525151.5@TRAF3IP2-AS1	ENST00000525151.5	antisense_RNA	111483516,111484118,111484744,111503296	111483665,111484145,111484861,111503608	Gene ID= ENSG00000231889.7 TPM= 1.06 Transcript Type= antisense_RNA
chr6	111532658	111533633	111532658	111533633	-	transcript3602.chr6.nnic@NA	transcript3602.chr6.nnic	NA	111532658	111533633	Gene ID= novel_gene_chr6_3603 TPM= 3.19 Transcript Type= NA
chr6	111556454	111606246	111556454	111606246	-	ENST00000368761.9@TRAF3IP2	ENST00000368761.9	protein_coding	111605776,111591258,111580197,111575643,111572895,111567624,111566444,111562965,111556454	111606246,111592094,111580389,111575821,111572983,111567692,111566560,111563039,111559551	Gene ID= ENSG00000056972.18 TPM= 6.37 Transcript Type= protein_coding
chr6	111558940	111605871	111558940	111605871	-	ENST00000359831.8@TRAF3IP2	ENST00000359831.8	protein_coding	111605776,111591258,111580197,111575643,111572895,111567624,111566444,111562965,111558940	111605871,111592094,111580389,111575821,111572983,111567692,111566557,111563039,111559551	Gene ID= ENSG00000056972.18 TPM= 3.19 Transcript Type= protein_coding
chr6	111660332	111873452	111660332	111873452	-	ENST00000354650.7@FYN	ENST00000354650.7	protein_coding	111872968,111846589,111780566,111719805,111714347,111707922,111703999,111702885,111700104,111696277,111694628,111694375,111674499,111660332	111873452,111846629,111780635,111720062,111714443,111708020,111704102,111703034,111700268,111696456,111694704,111694528,111674630,111661947	Gene ID= ENSG00000010810.17 TPM= 27.97 Transcript Type= protein_coding
chr6	111661286	111873466	111661286	111873466	-	transcript3611.chr6.nic@FYN	transcript3611.chr6.nic	protein_coding	111872968,111780566,111719805,111714347,111707922,111703999,111702885,111700104,111696277,111694628,111694375,111674499,111661286	111873466,111780635,111720062,111714443,111708020,111704102,111703034,111700268,111696456,111694704,111694528,111674630,111661947	Gene ID= ENSG00000010810.17 TPM= 10.44 Transcript Type= NA
chr6	111661286	111873454	111661286	111873454	-	transcript3615.chr6.nnic@FYN	transcript3615.chr6.nnic	protein_coding	111872968,111846589,111780566,111719805,111714347,111707922,111703999,111702885,111694628,111694375,111674499,111661286	111873454,111846629,111780635,111720062,111714443,111708020,111704102,111703034,111694704,111694528,111674630,111661947	Gene ID= ENSG00000010810.17 TPM= 3.01 Transcript Type= NA
chr6	111668110	111669458	111668110	111669458	+	transcript3624.chr6.nnic@NA	transcript3624.chr6.nnic	NA	111668110	111669458	Gene ID= novel_gene_chr6_3625 TPM= 3.19 Transcript Type= NA
chr6	112070777	112087501	112070777	112087501	-	transcript3630.chr6.nic@TUBE1	transcript3630.chr6.nic	protein_coding	112087410,112087233,112086556,112081092,112079633,112076322,112075937,112074710,112072758,112071902,112070777	112087501,112087306,112086608,112081207,112079754,112076509,112076112,112074850,112072898,112072076,112071570	Gene ID= ENSG00000074935.13 TPM= 3.19 Transcript Type= NA
chr6	112076276	112087527	112076276	112087527	-	transcript3633.chr6.nic@TUBE1	transcript3633.chr6.nic	protein_coding	112087410,112087233,112086556,112084189,112081092,112079633,112076276	112087527,112087306,112086608,112084246,112081207,112079754,112076509	Gene ID= ENSG00000074935.13 TPM= 3.19 Transcript Type= NA
chr6	112075085	112078694	112075085	112078694	-	ENST00000604689.1@TUBE1	ENST00000604689.1	protein_coding	112075085	112078694	Gene ID= ENSG00000074935.13 TPM= 1.06 Transcript Type= retained_intron
chr6	112070777	112087513	112070777	112087513	-	ENST00000368662.9@TUBE1	ENST00000368662.9	protein_coding	112087410,112087233,112086556,112084189,112081092,112079633,112076322,112075937,112074710,112072758,112071902,112070777	112087513,112087306,112086608,112084246,112081207,112079754,112076509,112076112,112074850,112072898,112072076,112071570	Gene ID= ENSG00000074935.13 TPM= 10.62 Transcript Type= protein_coding
chr6	112087638	112100895	112087638	112100895	+	ENST00000604268.1@FAM229B	ENST00000604268.1	protein_coding	112087638,112097041,112099270,112100670	112087709,112097201,112099408,112100895	Gene ID= ENSG00000203778.7 TPM= 25.49 Transcript Type= protein_coding
chr6	112106076	112108067	112106076	112108067	-	transcript3641.chr6.nnic@NA	transcript3641.chr6.nnic	NA	112106076	112108067	Gene ID= novel_gene_chr6_3642 TPM= 3.19 Transcript Type= NA
chr6	112108760	112254715	112108760	112254715	-	ENST00000230538.11@LAMA4	ENST00000230538.11	protein_coding	112254459,112253956,112216368,112207021,112201608,112191636,112189110,112187450,112185237,112178121,112175313,112172611,112165160,112158732,112155565,112154851,112150511,112148157,112144794,112142119,112141358,112140760,112139752,112139120,112136123,112134467,112133349,112132753,112130968,112129876,112128922,112122014,112120283,112119156,112117739,112115863,112114663,112114076,112108760	112254715,112254291,112216469,112207145,112201688,112191850,112189205,112187601,112185347,112178232,112175480,112172804,112165276,112158880,112155706,112154947,112150627,112148336,112144933,112142292,112141503,112140922,112139885,112139291,112136254,112134609,112133487,112132890,112131101,112130040,112129075,112122201,112120472,112119311,112117898,112115993,112114756,112114195,112109582	Gene ID= ENSG00000112769.18 TPM= 1.59 Transcript Type= protein_coding
chr6	112108860	112254710	112108860	112254710	-	ENST00000522006.5@LAMA4	ENST00000522006.5	protein_coding	112254442,112253956,112216368,112207021,112201608,112191636,112189131,112187450,112185237,112178121,112175313,112172611,112165160,112158732,112155565,112154851,112150511,112148157,112144794,112142119,112141358,112140760,112139752,112139120,112136123,112134467,112133349,112132753,112130968,112129876,112128922,112122014,112120283,112119156,112117739,112115863,112114663,112114076,112108860	112254710,112254291,112216469,112207145,112201688,112191850,112189205,112187601,112185347,112178232,112175480,112172804,112165276,112158880,112155706,112154947,112150627,112148336,112144933,112142292,112141503,112140922,112139885,112139291,112136254,112134609,112133487,112132890,112131101,112130040,112129075,112122201,112120472,112119311,112117898,112115993,112114756,112114195,112109582	Gene ID= ENSG00000112769.18 TPM= 3.72 Transcript Type= protein_coding
chr6	112213857	112254606	112213857	112254606	-	transcript3654.chr6.nic@LAMA4	transcript3654.chr6.nic	protein_coding	112254442,112253956,112216368,112213857	112254606,112254291,112216469,112214070	Gene ID= ENSG00000112769.18 TPM= 3.19 Transcript Type= NA
chr6	112253361	112254588	112253361	112254588	-	ENST00000368638.4@LAMA4	ENST00000368638.4	protein_coding	112254459,112253361	112254588,112254291	Gene ID= ENSG00000112769.18 TPM= 2.12 Transcript Type= protein_coding
chr6	112253784	112254578	112253784	112254578	-	ENST00000453937.2@LAMA4	ENST00000453937.2	protein_coding	112254442,112253784	112254578,112254291	Gene ID= ENSG00000112769.18 TPM= 39.3 Transcript Type= protein_coding
chr6	112169308	112171692	112169308	112171692	+	transcript3663.chr6.nnic@NA	transcript3663.chr6.nnic	NA	112169308	112171692	Gene ID= novel_gene_chr6_3664 TPM= 8.5 Transcript Type= NA
chr6	113859741	113860042	113859741	113860042	+	transcript3669.chr6.nnic@NA	transcript3669.chr6.nnic	NA	113859741	113860042	Gene ID= novel_gene_chr6_3670 TPM= 2.12 Transcript Type= NA
chr6	113943351	113971179	113943351	113971179	-	transcript3677.chr6.nic@HDAC2	transcript3677.chr6.nic	protein_coding	113970857,113959906,113958649,113956619,113956013,113953277,113949168,113948979,113946008,113945362,113944280,113943351	113971179,113960018,113958766,113956693,113956151,113953418,113949260,113949087,113946148,113945470,113944410,113943506	Gene ID= ENSG00000196591.11 TPM= 11.68 Transcript Type= NA
chr6	113940718	113971157	113940718	113971157	-	ENST00000368632.6@HDAC2	ENST00000368632.6	protein_coding	113970857,113962367,113959906,113958649,113956619,113956013,113953277,113949168,113948979,113946008,113945362,113944280,113943351,113941708,113940718	113971157,113962394,113960018,113958766,113956693,113956151,113953418,113949260,113949087,113946148,113945470,113944410,113943506,113941765,113941088	Gene ID= ENSG00000196591.11 TPM= 73.29 Transcript Type= protein_coding
chr6	116119745	116158761	116119745	116158761	-	transcript3698.chr6.nic@COL10A1	transcript3698.chr6.nic	protein_coding	116158614,116125339,116119745	116158761,116125507,116121961	Gene ID= ENSG00000123500.9 TPM= 3.19 Transcript Type= NA
chr6	116249963	116254076	116249963	116254076	-	transcript3699.chr6.nnic@TSPYL4	transcript3699.chr6.nnic	protein_coding	116252052,116249963	116254076,116250418	Gene ID= ENSG00000187189.10 TPM= 3.19 Transcript Type= NA
chr6	116249961	116254140	116249961	116254140	-	ENST00000420283.2@TSPYL4	ENST00000420283.2	protein_coding	116249961	116254140	Gene ID= ENSG00000187189.10 TPM= 8.5 Transcript Type= protein_coding
chr6	116276725	116279930	116276725	116279930	-	transcript3701.chr6.nnic@NA	transcript3701.chr6.nnic	NA	116276725	116279930	Gene ID= novel_gene_chr6_3702 TPM= 198.62 Transcript Type= NA
chr6	116571406	116593268	116571406	116593268	+	transcript3707.chr6.nic@RWDD1	transcript3707.chr6.nic	protein_coding	116571406,116572858,116574058,116580295,116584727,116588842,116590272,116590888,116592980	116571655,116572985,116574171,116580360,116584857,116588985,116590404,116590950,116593268	Gene ID= ENSG00000111832.12 TPM= 3.19 Transcript Type= NA
chr6	116571367	116597675	116571367	116597675	+	ENST00000466444.6@RWDD1	ENST00000466444.6	protein_coding	116571367,116580295,116584727,116588842,116590272,116590888,116592980	116571655,116580360,116584857,116588985,116590404,116590950,116597675	Gene ID= ENSG00000111832.12 TPM= 48.86 Transcript Type= protein_coding
chr6	116571409	116590298	116571409	116590298	+	ENST00000368590.9@RWDD1	ENST00000368590.9	protein_coding	116571409,116572858,116574058,116580295,116584727,116588842,116590272	116571655,116572985,116574171,116580360,116584857,116588985,116590298	Gene ID= ENSG00000111832.12 TPM= 1.06 Transcript Type= protein_coding
chr6	116571372	116588936	116571372	116588936	+	transcript3714.chr6.nic@RWDD1	transcript3714.chr6.nic	protein_coding	116571372,116574058,116580295,116584727,116588842	116571655,116574171,116580360,116584857,116588936	Gene ID= ENSG00000111832.12 TPM= 5.31 Transcript Type= NA
chr6	116635618	116668794	116635618	116668794	-	ENST00000368576.7@ZUFSP	ENST00000368576.7	protein_coding	116668566,116666634,116660736,116658803,116656684,116652004,116651572,116647459,116645714,116635618	116668794,116667207,116660846,116658924,116656852,116652192,116651737,116647610,116645934,116635879	Gene ID= ENSG00000153975.9 TPM= 2.12 Transcript Type= protein_coding
chr6	116681187	116741866	116681187	116741866	+	ENST00000368564.6@KPNA5	ENST00000368564.6	protein_coding	116681187,116689320,116692055,116692293,116698704,116702019,116705072,116716219,116722126,116724297,116725751,116726495,116729563,116732136	116681338,116689453,116692156,116692392,116698798,116702150,116705160,116716318,116722289,116724375,116725876,116726622,116729741,116741866	Gene ID= ENSG00000196911.10 TPM= 3.19 Transcript Type= protein_coding
chr6	116681211	116741866	116681211	116741866	+	ENST00000356348.6@KPNA5	ENST00000356348.6	protein_coding	116681211,116689320,116692055,116692293,116698704,116702019,116705072,116716219,116722126,116724297,116725751,116726495,116729563,116732136,116741506	116681338,116689453,116692156,116692392,116698798,116702150,116705160,116716318,116722289,116724375,116725876,116726622,116729741,116732368,116741866	Gene ID= ENSG00000196911.10 TPM= 1.06 Transcript Type= protein_coding
chr6	116752197	116765723	116752197	116765723	-	ENST00000368557.5@FAM162B	ENST00000368557.5	protein_coding	116765405,116765147,116761977,116752197	116765723,116765255,116762085,116752695	Gene ID= ENSG00000183807.7 TPM= 7.44 Transcript Type= protein_coding
chr6	117265558	117273565	117265558	117273565	+	transcript3728.chr6.nnic@VGLL2	transcript3728.chr6.nnic	protein_coding	117265558,117268182,117270543,117272309,117272454	117265844,117268491,117271064,117272371,117273565	Gene ID= ENSG00000170162.13 TPM= 3.19 Transcript Type= NA
chr6	117265558	117273622	117265558	117273622	+	transcript3730.chr6.nnic@VGLL2	transcript3730.chr6.nnic	protein_coding	117265558,117268182,117270543,117272309	117265844,117268491,117271064,117273622	Gene ID= ENSG00000170162.13 TPM= 2.12 Transcript Type= NA
chr6	117265558	117273565	117265558	117273565	+	ENST00000352536.7@VGLL2	ENST00000352536.7	protein_coding	117265558,117268182,117272454	117265844,117268491,117273565	Gene ID= ENSG00000170162.13 TPM= 8.5 Transcript Type= protein_coding
chr6	117265574	117273562	117265574	117273562	+	ENST00000326274.5@VGLL2	ENST00000326274.5	protein_coding	117265574,117268182,117270543,117272454	117265844,117268491,117271064,117273562	Gene ID= ENSG00000170162.13 TPM= 44.61 Transcript Type= protein_coding
chr6	117275235	117276513	117275235	117276513	+	transcript3740.chr6.nnic@NA	transcript3740.chr6.nnic	NA	117275235	117276513	Gene ID= novel_gene_chr6_3741 TPM= 2.12 Transcript Type= NA
chr6	117482662	117549797	117482662	117549797	+	ENST00000338728.9@DCBLD1	ENST00000338728.9	protein_coding	117482662,117503767,117519816,117521525,117525362,117532260,117537185,117538620,117539255,117540668,117540918,117543124,117544528,117545478,117547907	117482893,117503979,117519950,117521576,117525434,117532393,117537225,117538835,117539379,117540815,117541025,117543211,117544577,117545597,117549797	Gene ID= ENSG00000164465.18 TPM= 5.31 Transcript Type= protein_coding
chr6	117482657	117569858	117482657	117569858	+	ENST00000296955.12@DCBLD1	ENST00000296955.12	protein_coding	117482657,117503767,117519816,117521525,117525362,117532260,117537185,117538620,117539255,117540668,117540918,117543124,117544528,117545478,117569620	117482893,117503979,117519950,117521576,117525434,117532393,117537225,117538835,117539379,117540815,117541025,117543211,117544577,117545597,117569858	Gene ID= ENSG00000164465.18 TPM= 2.12 Transcript Type= protein_coding
chr6	117560272	117602542	117560272	117602542	-	ENST00000535237.2@GOPC	ENST00000535237.2	protein_coding	117602004,117578900,117577448,117575177,117573467,117570860,117566854,117560272	117602542,117579064,117577471,117575352,117573632,117570955,117567034,117563384	Gene ID= ENSG00000047932.13 TPM= 9.56 Transcript Type= protein_coding
chr6	118285227	118315244	118285227	118315244	+	transcript3759.chr6.nnic@SLC35F1	transcript3759.chr6.nnic	protein_coding	118285227,118314028,118315136	118285338,118314253,118315244	Gene ID= ENSG00000196376.10 TPM= 2.12 Transcript Type= NA
chr6	118285119	118317676	118285119	118317676	+	transcript3763.chr6.nic@SLC35F1	transcript3763.chr6.nic	protein_coding	118285119,118314028	118285338,118317676	Gene ID= ENSG00000196376.10 TPM= 25.49 Transcript Type= NA
chr6	118491431	118514699	118491431	118514699	-	transcript3766.chr6.nnic@CEP85L	transcript3766.chr6.nnic	protein_coding	118514263,118511298,118491431	118514699,118511415,118491865	Gene ID= ENSG00000111860.13 TPM= 3.19 Transcript Type= NA
chr6	118548298	118560730	118548298	118560730	+	ENST00000357525.5@PLN	ENST00000357525.5	protein_coding	118548298,118558825	118548392,118560730	Gene ID= ENSG00000198523.5 TPM= 18.06 Transcript Type= protein_coding
chr6	118548296	118561712	118548296	118561712	+	transcript3787.chr6.nnic@PLN	transcript3787.chr6.nnic	protein_coding	118548296,118558825	118548418,118561712	Gene ID= ENSG00000198523.5 TPM= 81.26 Transcript Type= NA
chr6	118560481	118562329	118560481	118562329	+	transcript3802.chr6.nnic@NA	transcript3802.chr6.nnic	NA	118560481	118562329	Gene ID= novel_gene_chr6_3803 TPM= 5.31 Transcript Type= NA
chr6	118578508	118578833	118578508	118578833	+	transcript3804.chr6.nnic@NA	transcript3804.chr6.nnic	NA	118578508	118578833	Gene ID= novel_gene_chr6_3805 TPM= 3.19 Transcript Type= NA
chr6	118586609	118590866	118586609	118590866	+	transcript3806.chr6.nnic@NA	transcript3806.chr6.nnic	NA	118586609	118590866	Gene ID= novel_gene_chr6_3807 TPM= 6.37 Transcript Type= NA
chr6	118894220	118909167	118894220	118909167	+	ENST00000229595.5@ASF1A	ENST00000229595.5	protein_coding	118894220,118900766,118905652,118907402	118894522,118900881,118905828,118909167	Gene ID= ENSG00000111875.7 TPM= 19.12 Transcript Type= protein_coding
chr6	118896043	118899014	118896043	118899014	-	transcript3818.chr6.nnic@NA	transcript3818.chr6.nnic	NA	118896043	118899014	Gene ID= novel_gene_chr6_3819 TPM= 5.31 Transcript Type= NA
chr6	119177209	119349761	119177209	119349761	-	ENST00000368468.3@MAN1A1	ENST00000368468.3	protein_coding	119349542,119348463,119306896,119301988,119290683,119248260,119204759,119201254,119193777,119189664,119188405,119180312,119177209	119349761,119349287,119306992,119302103,119290763,119248354,119204882,119201347,119193892,119189883,119188577,119180427,119179945	Gene ID= ENSG00000111885.6 TPM= 9.56 Transcript Type= protein_coding
chr6	121080237	121334430	121080237	121334430	-	ENST00000275159.10@TBC1D32	ENST00000275159.10	protein_coding	121334276,121321633,121317495,121310779,121307976,121304755,121304522,121304365,121303617,121299446,121294570,121292053,121283818,121281544,121279121,121256084,121255328,121242201,121241465,121239070,121223236,121205075,121170405,121160948,121160010,121131627,121126378,121115172,121113062,121112505,121106023,121090853,121080237	121334430,121321794,121317672,121310847,121308101,121304833,121304625,121304426,121303761,121299505,121294660,121292193,121283910,121281686,121279245,121256285,121255410,121242339,121241552,121239188,121223352,121205163,121170527,121161056,121160103,121131752,121126461,121115241,121113177,121112659,121106163,121091041,121080890	Gene ID= ENSG00000146350.13 TPM= 2.12 Transcript Type= protein_coding
chr6	121202751	121204003	121202751	121204003	+	transcript3828.chr6.nnic@NA	transcript3828.chr6.nnic	NA	121202751	121204003	Gene ID= novel_gene_chr6_3829 TPM= 2.12 Transcript Type= NA
chr6	121435692	121449727	121435692	121449727	+	ENST00000282561.3@GJA1	ENST00000282561.3	protein_coding	121435692,121446832	121435832,121449727	Gene ID= ENSG00000152661.7 TPM= 24.43 Transcript Type= protein_coding
chr6	121437356	121441199	121437356	121441199	-	transcript3830.chr6.nnic@NA	transcript3830.chr6.nnic	NA	121437356	121441199	Gene ID= novel_gene_chr6_3831 TPM= 8.5 Transcript Type= NA
chr6	122399546	122432966	122399546	122432966	+	ENST00000368455.8@HSF2	ENST00000368455.8	protein_coding	122399546,122412373,122412637,122413525,122416221,122419168,122420135,122422150,122422718,122423581,122427903,122431430,122431925	122399830,122412481,122412764,122413649,122416296,122419229,122420222,122422298,122422957,122423686,122427956,122431514,122432966	Gene ID= ENSG00000025156.12 TPM= 14.87 Transcript Type= protein_coding
chr6	122399551	122433119	122399551	122433119	+	ENST00000452194.5@HSF2	ENST00000452194.5	protein_coding	122399551,122412373,122412637,122413525,122416221,122419168,122420135,122422150,122422718,122423581,122431430,122431925	122399830,122412481,122412764,122413649,122416296,122419229,122420222,122422298,122422957,122423686,122431514,122433119	Gene ID= ENSG00000025156.12 TPM= 26.55 Transcript Type= protein_coding
chr6	122399652	122420409	122399652	122420409	+	transcript3845.chr6.nic@HSF2	transcript3845.chr6.nic	protein_coding	122399652,122412373,122412637,122413525,122416221,122419168,122420135	122399830,122412481,122412764,122413649,122416296,122419229,122420409	Gene ID= ENSG00000025156.12 TPM= 2.12 Transcript Type= NA
chr6	122438579	122441346	122438579	122441346	+	transcript3846.chr6.nnic@NA	transcript3846.chr6.nnic	NA	122438579	122441346	Gene ID= novel_gene_chr6_3847 TPM= 66.92 Transcript Type= NA
chr6	122443354	122471822	122443354	122471822	-	ENST00000339697.4@SERINC1	ENST00000339697.4	protein_coding	122471699,122458520,122456481,122454151,122453770,122451888,122451664,122447121,122446774,122443354	122471822,122458681,122456650,122454230,122453907,122452057,122451754,122447265,122447004,122445179	Gene ID= ENSG00000111897.6 TPM= 316.52 Transcript Type= protein_coding
chr6	122449966	122451775	122449966	122451775	+	transcript3856.chr6.nnic@NA	transcript3856.chr6.nnic	NA	122449966	122451775	Gene ID= novel_gene_chr6_3857 TPM= 10.62 Transcript Type= NA
chr6	122789170	122809720	122789170	122809720	+	ENST00000368440.4@SMPDL3A	ENST00000368440.4	protein_coding	122789170,122795677,122796824,122801310,122803664,122804909,122806233,122809091	122789458,122795890,122796968,122801406,122803833,122805089,122806357,122809720	Gene ID= ENSG00000172594.12 TPM= 2.66 Transcript Type= protein_coding
chr6	122789049	122809717	122789049	122809717	+	ENST00000539041.5@SMPDL3A	ENST00000539041.5	protein_coding	122789049,122796824,122801310,122803664,122804909,122806233,122809091	122789458,122796968,122801406,122803833,122805089,122806357,122809717	Gene ID= ENSG00000172594.12 TPM= 1.59 Transcript Type= protein_coding
chr6	123498192	123637169	123498192	123637169	-	transcript3897.chr6.nnic@TRDN	transcript3897.chr6.nnic	protein_coding	123636754,123570923,123548454,123547340,123530506,123516141,123512303,123503719,123498192	123637169,123571132,123548612,123547372,123530565,123516206,123512362,123503901,123500713	Gene ID= ENSG00000186439.12 TPM= 20.83 Transcript Type= NA
chr6	123528681	123636972	123528681	123636972	-	ENST00000542443.5@TRDN	ENST00000542443.5	protein_coding	123636754,123570923,123548454,123547340,123530506,123528681	123636972,123571132,123548612,123547372,123530565,123529293	Gene ID= ENSG00000186439.12 TPM= 24.49 Transcript Type= protein_coding
chr6	123439530	123470141	123439530	123470141	+	transcript3916.chr6.nic@AL445259.1	transcript3916.chr6.nic	antisense_RNA	123439530,123462247,123468800,123469637	123439777,123462358,123468930,123470141	Gene ID= ENSG00000235535.7 TPM= 4.25 Transcript Type= NA
chr6	123439595	123511509	123439595	123511509	+	transcript3919.chr6.nic@AL445259.1	transcript3919.chr6.nic	antisense_RNA	123439595,123462247,123468800,123509446	123439777,123462358,123468930,123511509	Gene ID= ENSG00000235535.7 TPM= 2.12 Transcript Type= NA
chr6	123439551	123473376	123439551	123473376	+	transcript3942.chr6.nic@AL445259.1	transcript3942.chr6.nic	antisense_RNA	123439551,123468816,123469637	123439777,123468930,123473376	Gene ID= ENSG00000235535.7 TPM= 7.44 Transcript Type= NA
chr6	123439551	123491757	123439551	123491757	+	transcript3946.chr6.nic@AL445259.1	transcript3946.chr6.nic	antisense_RNA	123439551,123468816,123489505	123439777,123468930,123491757	Gene ID= ENSG00000235535.7 TPM= 7.44 Transcript Type= NA
chr6	123439555	123512310	123439555	123512310	+	transcript3955.chr6.nic@AL445259.1	transcript3955.chr6.nic	antisense_RNA	123439555,123468800,123509446	123439777,123468930,123512310	Gene ID= ENSG00000235535.7 TPM= 2.12 Transcript Type= NA
chr6	123439706	123470141	123439706	123470141	+	ENST00000629087.2@AL445259.1	ENST00000629087.2	antisense_RNA	123439706,123462247,123468816,123469637	123439777,123462358,123468930,123470141	Gene ID= ENSG00000235535.7 TPM= 9.56 Transcript Type= antisense_RNA
chr6	123439709	123488921	123439709	123488921	+	ENST00000625415.1@AL445259.1	ENST00000625415.1	antisense_RNA	123439709,123468816,123488730	123439777,123468930,123488921	Gene ID= ENSG00000235535.7 TPM= 1.06 Transcript Type= antisense_RNA
chr6	123446302	123448623	123446302	123448623	-	transcript3983.chr6.nnic@NA	transcript3983.chr6.nnic	NA	123446302	123448623	Gene ID= novel_gene_chr6_3984 TPM= 4.25 Transcript Type= NA
chr6	123612118	123614321	123612118	123614321	+	transcript3971.chr6.nnic@NA	transcript3971.chr6.nnic	NA	123612118	123614321	Gene ID= novel_gene_chr6_3972 TPM= 32.93 Transcript Type= NA
chr6	123632857	123637006	123632857	123637006	-	transcript3981.chr6.nnic@NA	transcript3981.chr6.nnic	NA	123632857	123637006	Gene ID= novel_gene_chr6_3982 TPM= 5.31 Transcript Type= NA
chr6	124961989	124963847	124961989	124963847	+	transcript4001.chr6.nnic@RNF217	transcript4001.chr6.nnic	protein_coding	124961989,124963703	124963426,124963847	Gene ID= ENSG00000146373.16 TPM= 3.19 Transcript Type= NA
chr6	125153719	125263494	125153719	125263494	+	transcript4005.chr6.nnic@TPD52L1	transcript4005.chr6.nnic	protein_coding	125153719,125220078,125229118,125248282,125252022,125253717,125257098,125258574,125262834	125153970,125220193,125229266,125248383,125252036,125253755,125257158,125258655,125263494	Gene ID= ENSG00000111907.20 TPM= 29.39 Transcript Type= NA
chr6	125153649	125263497	125153649	125263497	+	ENST00000304877.17@TPD52L1	ENST00000304877.17	protein_coding	125153649,125220078,125229118,125248282,125252022,125253717,125257098,125262834	125153970,125220193,125229266,125248383,125252036,125253755,125257158,125263497	Gene ID= ENSG00000111907.20 TPM= 16.64 Transcript Type= protein_coding
chr6	125153656	125264407	125153656	125264407	+	ENST00000534000.5@TPD52L1	ENST00000534000.5	protein_coding	125153656,125220078,125229118,125248282,125253717,125257098,125262834	125153970,125220193,125229266,125248383,125253755,125257158,125264407	Gene ID= ENSG00000111907.20 TPM= 1.06 Transcript Type= protein_coding
chr6	125261011	125263496	125261011	125263496	+	ENST00000571678.1@TPD52L1	ENST00000571678.1	protein_coding	125261011	125263496	Gene ID= ENSG00000111907.20 TPM= 2.12 Transcript Type= retained_intron
chr6	125153733	125263497	125153733	125263497	+	ENST00000368402.9@TPD52L1	ENST00000368402.9	protein_coding	125153733,125220078,125229118,125248282,125253717,125262834	125153970,125220193,125229266,125248383,125253755,125263497	Gene ID= ENSG00000111907.20 TPM= 89.93 Transcript Type= protein_coding
chr6	125259726	125260953	125259726	125260953	+	transcript4028.chr6.nnic@NA	transcript4028.chr6.nnic	NA	125259726	125260953	Gene ID= novel_gene_chr6_4029 TPM= 2.12 Transcript Type= NA
chr6	125275882	125301923	125275882	125301923	-	transcript4032.chr6.nnic@HDDC2	transcript4032.chr6.nnic	protein_coding	125301598,125300538,125298714,125292841,125277102,125275882	125301923,125300659,125298816,125292909,125277240,125276243	Gene ID= ENSG00000111906.17 TPM= 7.97 Transcript Type= NA
chr6	125275882	125302136	125275882	125302136	-	transcript4040.chr6.nnic@HDDC2	transcript4040.chr6.nnic	protein_coding	125302033,125300538,125292841,125277102,125275882	125302136,125300659,125292909,125277240,125276243	Gene ID= ENSG00000111906.17 TPM= 10.09 Transcript Type= NA
chr6	125275886	125301975	125275886	125301975	-	ENST00000398153.6@HDDC2	ENST00000398153.6	protein_coding	125301849,125300538,125298714,125292841,125277102,125275886	125301975,125300659,125298816,125292909,125277240,125276243	Gene ID= ENSG00000111906.17 TPM= 33.99 Transcript Type= protein_coding
chr6	125294250	125297162	125294250	125297162	-	transcript4042.chr6.nnic@NA	transcript4042.chr6.nnic	NA	125294250	125297162	Gene ID= novel_gene_chr6_4043 TPM= 2.12 Transcript Type= NA
chr6	125749580	125761269	125749580	125761269	+	ENST00000368364.3@HEY2	ENST00000368364.3	protein_coding	125749580,125751801,125752007,125754465,125759117	125749859,125751879,125752090,125754546,125761269	Gene ID= ENSG00000135547.8 TPM= 11.68 Transcript Type= protein_coding
chr6	125919224	125931111	125919224	125931111	+	ENST00000438495.6@NCOA7	ENST00000438495.6	protein_coding	125919224,125920943,125922682,125927663,125928174,125928636	125919431,125921068,125922834,125927758,125928247,125931111	Gene ID= ENSG00000111912.19 TPM= 1.06 Transcript Type= protein_coding
chr6	125790505	125815404	125790505	125815404	+	transcript4051.chr6.nic@NCOA7	transcript4051.chr6.nic	protein_coding	125790505,125815291	125791067,125815404	Gene ID= ENSG00000111912.19 TPM= 2.12 Transcript Type= NA
chr6	125956781	125980244	125956781	125980244	+	ENST00000229633.6@HINT3	ENST00000229633.6	protein_coding	125956781,125966887,125972259,125974847,125977644	125957178,125967004,125972328,125974973,125980244	Gene ID= ENSG00000111911.6 TPM= 15.93 Transcript Type= protein_coding
chr6	125986540	126039276	125986540	126039276	+	transcript4060.chr6.nnic@TRMT11	transcript4060.chr6.nnic	protein_coding	125986540,125993757,125995967,125998053,125998223,125998550,125999457,126008392,126010925,126012771,126012970,126021160,126038705	125986622,125993822,125996040,125998134,125998315,125998684,125999613,126008472,126011417,126012852,126013101,126021280,126039276	Gene ID= ENSG00000066651.18 TPM= 2.66 Transcript Type= NA
chr6	125986479	126039276	125986479	126039276	+	ENST00000368332.7@TRMT11	ENST00000368332.7	protein_coding	125986479,125993757,125995967,125998053,125998223,125998550,125999457,126008392,126011253,126012771,126012970,126021160,126038705	125986622,125993822,125996040,125998134,125998315,125998684,125999613,126008472,126011417,126012852,126013101,126021265,126039276	Gene ID= ENSG00000066651.18 TPM= 14.34 Transcript Type= protein_coding
chr6	127118604	127197296	127118604	127197296	+	ENST00000356698.8@RSPO3	ENST00000356698.8	protein_coding	127118604,127148648,127150426,127155241,127195823	127119289,127148839,127150572,127155438,127197296	Gene ID= ENSG00000146374.13 TPM= 1.06 Transcript Type= protein_coding
chr6	127266840	127288362	127266840	127288362	+	transcript4068.chr6.nic@RNF146	transcript4068.chr6.nic	protein_coding	127266840,127280231,127280516,127286050,127286616	127266925,127280340,127280604,127286177,127288362	Gene ID= ENSG00000118518.15 TPM= 2.12 Transcript Type= NA
chr6	127266738	127288554	127266738	127288554	+	ENST00000309649.7@RNF146	ENST00000309649.7	protein_coding	127266738,127280231,127280516,127286050,127286616	127267095,127280340,127280604,127286177,127288554	Gene ID= ENSG00000118518.15 TPM= 5.31 Transcript Type= protein_coding
chr6	127266610	127288558	127266610	127288558	+	ENST00000368314.5@RNF146	ENST00000368314.5	protein_coding	127266610,127280231,127286616	127266925,127280340,127288558	Gene ID= ENSG00000118518.15 TPM= 1.06 Transcript Type= protein_coding
chr6	127285531	127287305	127285531	127287305	-	transcript4074.chr6.nnic@NA	transcript4074.chr6.nnic	NA	127285531	127287305	Gene ID= novel_gene_chr6_4075 TPM= 4.25 Transcript Type= NA
chr6	127288710	127343609	127288710	127343609	-	ENST00000454859.7@ECHDC1	ENST00000454859.7	protein_coding	127343336,127330809,127327002,127316450,127314816,127288710	127343609,127331030,127327144,127316502,127314896,127290277	Gene ID= ENSG00000093144.18 TPM= 14.87 Transcript Type= protein_coding
chr6	127288762	127331030	127288762	127331030	-	ENST00000368295.8@ECHDC1	ENST00000368295.8	protein_coding	127330809,127326998,127314816,127288762	127331030,127327144,127314896,127290277	Gene ID= ENSG00000093144.18 TPM= 2.12 Transcript Type= nonsense_mediated_decay
chr6	127289634	127343599	127289634	127343599	-	ENST00000368291.6@ECHDC1	ENST00000368291.6	protein_coding	127343336,127330809,127327002,127314816,127289634	127343599,127331030,127327144,127314896,127290277	Gene ID= ENSG00000093144.18 TPM= 3.19 Transcript Type= protein_coding
chr6	127969837	128520616	127969837	128520616	-	ENST00000368210.7@PTPRK	ENST00000368210.7	protein_coding	128520259,128397566,128322039,128242521,128240035,128218922,128184432,128089690,128083715,128082437,128078813,128067519,128064758,128009130,128005084,128003197,127998720,127996901,127995462,127995249,127992673,127991294,127990769,127985721,127983242,127982831,127981116,127976923,127976657,127973664,127973022,127969837	128520616,128397688,128322310,128242602,128240150,128219096,128184725,128089992,128083824,128082638,128078918,128067792,128064794,128009268,128005244,128003232,127998904,127996988,127995538,127995266,127992709,127991391,127990885,127985875,127983377,127982980,127981289,127977054,127976782,127973827,127973157,127970280	Gene ID= ENSG00000152894.14 TPM= 2.12 Transcript Type= protein_coding
chr6	127968779	128520674	127968779	128520674	-	ENST00000368226.8@PTPRK	ENST00000368226.8	protein_coding	128520259,128397566,128322039,128242521,128240035,128218922,128184432,128089690,128083715,128082437,128078813,128067519,128064758,128009130,128005084,127998720,127996901,127995462,127992673,127991294,127990769,127985721,127983242,127982831,127981116,127976923,127976657,127973664,127973022,127968779	128520674,128397688,128322310,128242602,128240150,128219096,128184725,128089992,128083824,128082638,128078918,128067792,128064794,128009268,128005244,127998904,127996988,127995538,127992709,127991391,127990885,127985875,127983377,127982980,127981289,127977054,127976782,127973827,127973157,127970280	Gene ID= ENSG00000152894.14 TPM= 6.37 Transcript Type= protein_coding
chr6	128062066	128520616	128062066	128520616	-	transcript4093.chr6.nic@PTPRK	transcript4093.chr6.nic	protein_coding	128520259,128397566,128322039,128242521,128240035,128218922,128184432,128089690,128083715,128082437,128078813,128067519,128064758,128062066	128520616,128397688,128322310,128242602,128240150,128219096,128184725,128089992,128083824,128082638,128078918,128067792,128064794,128062424	Gene ID= ENSG00000152894.14 TPM= 4.78 Transcript Type= NA
chr6	128182652	128520616	128182652	128520616	-	transcript4098.chr6.nic@PTPRK	transcript4098.chr6.nic	protein_coding	128520259,128397566,128322039,128242521,128240035,128218922,128182652	128520616,128397688,128322310,128242602,128240150,128219096,128184725	Gene ID= ENSG00000152894.14 TPM= 2.66 Transcript Type= NA
chr6	128191669	128520616	128191669	128520616	-	transcript4102.chr6.nnic@PTPRK	transcript4102.chr6.nnic	protein_coding	128520259,128397566,128322039,128242521,128240035,128218922,128191669	128520616,128397688,128322310,128242602,128240150,128219096,128192809	Gene ID= ENSG00000152894.14 TPM= 2.12 Transcript Type= NA
chr6	128883172	129252498	128883172	129252498	+	transcript4113.chr6.nic@LAMA2	transcript4113.chr6.nic	protein_coding	128883172,129049918,129059784,129098173,129143901,129146959,129148979,129154505,129165576,129177706,129190205,129192680,129250112,129252084	128883357,129050088,129059896,129098415,129144080,129147048,129149096,129154683,129165675,129177866,129190345,129192853,129250213,129252498	Gene ID= ENSG00000196569.11 TPM= 4.78 Transcript Type= NA
chr6	128883119	129193800	128883119	129193800	+	transcript4115.chr6.nic@LAMA2	transcript4115.chr6.nic	protein_coding	128883119,129049918,129059784,129098173,129143901,129146959,129148979,129154505,129165576,129177706,129190205,129192680	128883357,129050088,129059896,129098415,129144080,129147048,129149096,129154683,129165675,129177866,129190345,129193800	Gene ID= ENSG00000196569.11 TPM= 4.78 Transcript Type= NA
chr6	128883206	128887896	128883206	128887896	+	transcript4129.chr6.nnic@NA	transcript4129.chr6.nnic	NA	128883206	128887896	Gene ID= novel_gene_chr6_4130 TPM= 4.25 Transcript Type= NA
chr6	128883298	128884324	128883298	128884324	+	transcript4121.chr6.nnic@NA	transcript4121.chr6.nnic	NA	128883298	128884324	Gene ID= novel_gene_chr6_4122 TPM= 4.25 Transcript Type= NA
chr6	128904454	128908482	128904454	128908482	-	transcript4147.chr6.nnic@NA	transcript4147.chr6.nnic	NA	128904454	128908482	Gene ID= novel_gene_chr6_4148 TPM= 29.74 Transcript Type= NA
chr6	128917736	128921854	128917736	128921854	-	transcript4149.chr6.nnic@NA	transcript4149.chr6.nnic	NA	128917736	128921854	Gene ID= novel_gene_chr6_4150 TPM= 10.62 Transcript Type= NA
chr6	128921699	128924671	128921699	128924671	-	transcript4141.chr6.nnic@NA	transcript4141.chr6.nnic	NA	128921699	128924671	Gene ID= novel_gene_chr6_4142 TPM= 27.62 Transcript Type= NA
chr6	128937854	128939911	128937854	128939911	-	transcript4155.chr6.nnic@NA	transcript4155.chr6.nnic	NA	128937854	128939911	Gene ID= novel_gene_chr6_4156 TPM= 3.19 Transcript Type= NA
chr6	129052307	129053355	129052307	129053355	-	transcript4157.chr6.nnic@NA	transcript4157.chr6.nnic	NA	129052307	129053355	Gene ID= novel_gene_chr6_4158 TPM= 3.19 Transcript Type= NA
chr6	129066040	129070997	129066040	129070997	-	transcript4143.chr6.nnic@NA	transcript4143.chr6.nnic	NA	129066040	129070997	Gene ID= novel_gene_chr6_4144 TPM= 15.93 Transcript Type= NA
chr6	129099116	129101867	129099116	129101867	-	transcript4159.chr6.nnic@NA	transcript4159.chr6.nnic	NA	129099116	129101867	Gene ID= novel_gene_chr6_4160 TPM= 71.16 Transcript Type= NA
chr6	129102132	129104322	129102132	129104322	-	transcript4163.chr6.nnic@NA	transcript4163.chr6.nnic	NA	129102132	129104322	Gene ID= novel_gene_chr6_4164 TPM= 2.12 Transcript Type= NA
chr6	129208493	129208658	129208493	129208658	+	transcript4131.chr6.nnic@NA	transcript4131.chr6.nnic	NA	129208493	129208658	Gene ID= novel_gene_chr6_4132 TPM= 2.12 Transcript Type= NA
chr6	129243048	129243722	129243048	129243722	+	transcript4133.chr6.nnic@NA	transcript4133.chr6.nnic	NA	129243048	129243722	Gene ID= novel_gene_chr6_4134 TPM= 3.19 Transcript Type= NA
chr6	129306349	129310055	129306349	129310055	-	transcript4165.chr6.nnic@NA	transcript4165.chr6.nnic	NA	129306349	129310055	Gene ID= novel_gene_chr6_4166 TPM= 2.12 Transcript Type= NA
chr6	129318298	129318605	129318298	129318605	-	transcript4171.chr6.nnic@NA	transcript4171.chr6.nnic	NA	129318298	129318605	Gene ID= novel_gene_chr6_4172 TPM= 2.12 Transcript Type= NA
chr6	129338839	129340850	129338839	129340850	+	transcript4125.chr6.nnic@NA	transcript4125.chr6.nnic	NA	129338839	129340850	Gene ID= novel_gene_chr6_4126 TPM= 2.12 Transcript Type= NA
chr6	129353450	129358003	129353450	129358003	-	transcript4145.chr6.nnic@NA	transcript4145.chr6.nnic	NA	129353450	129358003	Gene ID= novel_gene_chr6_4146 TPM= 6.37 Transcript Type= NA
chr6	129374746	129376170	129374746	129376170	-	transcript4151.chr6.nnic@NA	transcript4151.chr6.nnic	NA	129374746	129376170	Gene ID= novel_gene_chr6_4152 TPM= 20.18 Transcript Type= NA
chr6	129376535	129377956	129376535	129377956	+	transcript4135.chr6.nnic@NA	transcript4135.chr6.nnic	NA	129376535	129377956	Gene ID= novel_gene_chr6_4136 TPM= 2.12 Transcript Type= NA
chr6	129379325	129381944	129379325	129381944	-	transcript4167.chr6.nnic@NA	transcript4167.chr6.nnic	NA	129379325	129381944	Gene ID= novel_gene_chr6_4168 TPM= 2.12 Transcript Type= NA
chr6	129391245	129392140	129391245	129392140	-	transcript4169.chr6.nnic@NA	transcript4169.chr6.nnic	NA	129391245	129392140	Gene ID= novel_gene_chr6_4170 TPM= 2.12 Transcript Type= NA
chr6	129393097	129397093	129393097	129397093	+	transcript4123.chr6.nnic@NA	transcript4123.chr6.nnic	NA	129393097	129397093	Gene ID= novel_gene_chr6_4124 TPM= 5.31 Transcript Type= NA
chr6	129406785	129412561	129406785	129412561	+	transcript4137.chr6.nnic@NA	transcript4137.chr6.nnic	NA	129406785	129412561	Gene ID= novel_gene_chr6_4138 TPM= 2.12 Transcript Type= NA
chr6	129512473	129516563	129512473	129516563	+	transcript4139.chr6.nnic@NA	transcript4139.chr6.nnic	NA	129512473	129516563	Gene ID= novel_gene_chr6_4140 TPM= 8.5 Transcript Type= NA
chr6	130839347	131063322	130839347	131063322	-	ENST00000628542.2@EPB41L2	ENST00000628542.2	protein_coding	131063155,130955994,130955105,130926605,130908821,130904465,130900962,130899491,130894967,130894344,130890294,130885096,130869563,130867459,130865536,130863638,130858131,130839347	131063322,130956499,130955317,130926709,130908863,130904540,130901180,130899578,130895119,130894441,130890466,130885268,130870126,130867581,130865634,130863718,130858243,130840598	Gene ID= ENSG00000079819.18 TPM= 10.62 Transcript Type= protein_coding
chr6	131135261	131283532	131135261	131283532	+	transcript4181.chr6.nic@AKAP7	transcript4181.chr6.nic	protein_coding	131135261,131145285,131160059,131165081,131169113,131199461,131219661,131282399	131135782,131145416,131160198,131165217,131169273,131199573,131219808,131283532	Gene ID= ENSG00000118507.15 TPM= 9.56 Transcript Type= NA
chr6	131135666	131283535	131135666	131283535	+	ENST00000431975.6@AKAP7	ENST00000431975.6	protein_coding	131135666,131145285,131160059,131165081,131169113,131199461,131219661,131281530	131135782,131145416,131160198,131165217,131169273,131199573,131219808,131283535	Gene ID= ENSG00000118507.15 TPM= 2.12 Transcript Type= protein_coding
chr6	131135737	131283532	131135737	131283532	+	ENST00000541650.5@AKAP7	ENST00000541650.5	protein_coding	131135737,131145288,131160059,131165081,131169113,131199461,131219661,131282399	131135782,131145416,131160198,131165217,131169273,131199573,131219808,131283532	Gene ID= ENSG00000118507.15 TPM= 1.06 Transcript Type= protein_coding
chr6	131586738	131628235	131586738	131628235	-	transcript4184.chr6.nic@MED23	transcript4184.chr6.nic	protein_coding	131628011,131627641,131627396,131624865,131623351,131621881,131620628,131619827,131618407,131615907,131615324,131610046,131607928,131606479,131605240,131604178,131603030,131602218,131600038,131598556,131598287,131596518,131595947,131594099,131593006,131592388,131591313,131590322,131589465,131586738	131628235,131627672,131627483,131624989,131623462,131621979,131620729,131619896,131618519,131616002,131615341,131610246,131608071,131606624,131605485,131604320,131603204,131602381,131600162,131598761,131598467,131596688,131596163,131594335,131593171,131592460,131591527,131590442,131589596,131587846	Gene ID= ENSG00000112282.17 TPM= 9.56 Transcript Type= NA
chr6	131808016	131895155	131808016	131895155	+	ENST00000360971.6@ENPP1	ENST00000360971.6	protein_coding	131808016,131847776,131849990,131851142,131852175,131854926,131858668,131860387,131861595,131864506,131864866,131868018,131869358,131872070,131872923,131874268,131875776,131876992,131878542,131879880,131882345,131883694,131884931,131886562,131890341	131808275,131847848,131850106,131851267,131852235,131855023,131858747,131860506,131861704,131864571,131864938,131868126,131869489,131872101,131873050,131874337,131875863,131877161,131878593,131880034,131882474,131883774,131885063,131886724,131895155	Gene ID= ENSG00000197594.11 TPM= 1.06 Transcript Type= protein_coding
chr6	131948176	131951373	131948176	131951373	-	ENST00000367976.3@CTGF	ENST00000367976.3	protein_coding	131951107,131950770,131950292,131949949,131948176	131951373,131950992,131950543,131950160,131949560	Gene ID= ENSG00000118523.5 TPM= 120.02 Transcript Type= protein_coding
chr6	132296055	132401545	132296055	132401545	-	ENST00000367963.7@MOXD1	ENST00000367963.7	protein_coding	132401163,132374631,132372830,132372608,132328415,132328013,132323931,132322679,132320629,132315635,132297787,132296055	132401545,132374777,132372997,132372691,132328594,132328115,132324097,132322870,132320688,132315777,132297955,132297317	Gene ID= ENSG00000079931.14 TPM= 2.12 Transcript Type= protein_coding
chr6	132743870	132758008	132743870	132758008	-	ENST00000326499.10@VNN2	ENST00000326499.10	protein_coding	132757671,132757416,132755843,132752461,132751145,132749695,132743870	132758008,132757546,132756035,132752749,132751518,132749865,132744491	Gene ID= ENSG00000112303.13 TPM= 1.06 Transcript Type= protein_coding
chr6	132814441	132817564	132814441	132817564	+	ENST00000230050.3@RPS12	ENST00000230050.3	protein_coding	132814441,132814732,132814972,132816461,132816960,132817480	132814613,132814782,132815088,132816563,132817061,132817564	Gene ID= ENSG00000112306.7 TPM= 293.16 Transcript Type= protein_coding
chr6	132814569	132817564	132814569	132817564	+	ENST00000484616.2@RPS12	ENST00000484616.2	protein_coding	132814569,132814732,132814972,132816461,132816960,132817480	132814613,132814782,132815224,132816563,132817061,132817564	Gene ID= ENSG00000112306.7 TPM= 4.25 Transcript Type= retained_intron
chr6	133240321	133241284	133240321	133241284	-	transcript4221.chr6.nnic@NA	transcript4221.chr6.nnic	NA	133240321	133241284	Gene ID= novel_gene_chr6_4222 TPM= 2.12 Transcript Type= NA
chr6	133241349	133276929	133241349	133276929	+	transcript4219.chr6.nic@EYA4	transcript4219.chr6.nic	protein_coding	133241349,133274716	133241749,133276929	Gene ID= ENSG00000112319.17 TPM= 7.44 Transcript Type= NA
chr6	133319513	133321747	133319513	133321747	-	transcript4223.chr6.nnic@NA	transcript4223.chr6.nnic	NA	133319513	133321747	Gene ID= novel_gene_chr6_4224 TPM= 2.12 Transcript Type= NA
chr6	133964457	133965749	133964457	133965749	-	transcript4239.chr6.nnic@NA	transcript4239.chr6.nnic	NA	133964457	133965749	Gene ID= novel_gene_chr6_4240 TPM= 2.12 Transcript Type= NA
chr6	133988697	134052636	133988697	134052636	-	ENST00000275230.5@SLC2A12	ENST00000275230.5	protein_coding	134052378,134028381,134006812,134001997,133988697	134052636,134029721,134006934,134002129,133991308	Gene ID= ENSG00000146411.5 TPM= 2.12 Transcript Type= protein_coding
chr6	134169252	134174896	134169252	134174896	-	ENST00000237305.11@SGK1	ENST00000237305.11	protein_coding	134174732,134174511,134174005,134173462,134173274,134173023,134172662,134172193,134171637,134171023,134170826,134169252	134174896,134174586,134174080,134173566,134173357,134173154,134172774,134172316,134171732,134171178,134170915,134170435	Gene ID= ENSG00000118515.11 TPM= 33.99 Transcript Type= protein_coding
chr6	134169250	134175991	134169250	134175991	-	ENST00000413996.7@SGK1	ENST00000413996.7	protein_coding	134175544,134174511,134174005,134173462,134173274,134173023,134172662,134172193,134171637,134171023,134170826,134169250	134175991,134174586,134174080,134173566,134173357,134173154,134172774,134172316,134171732,134171178,134170915,134170435	Gene ID= ENSG00000118515.11 TPM= 38.24 Transcript Type= protein_coding
chr6	134960378	135054898	134960378	135054898	-	ENST00000367837.9@HBS1L	ENST00000367837.9	protein_coding	135054649,135050582,135042001,135039573,135002734,134997397,134996777,134993758,134987645,134986736,134986066,134985341,134982458,134979178,134978679,134969238,134966329,134960378	135054898,135050647,135042126,135039767,135002842,134997656,134996942,134993875,134987791,134986810,134986183,134985409,134982562,134979268,134978787,134969338,134966473,134965290	Gene ID= ENSG00000112339.14 TPM= 141.27 Transcript Type= protein_coding
chr6	134964629	135054821	134964629	135054821	-	transcript4255.chr6.nnic@HBS1L	transcript4255.chr6.nnic	protein_coding	135054649,135050582,135042001,135039573,135002734,134997397,134996777,134993758,134987645,134986736,134986066,134985341,134982458,134979178,134978679,134966329,134964629	135054821,135050647,135042126,135039767,135002842,134997656,134996942,134993875,134987791,134986810,134986183,134985409,134982562,134979268,134978787,134966473,134965290	Gene ID= ENSG00000112339.14 TPM= 7.79 Transcript Type= NA
chr6	135035857	135054884	135035857	135054884	-	ENST00000367822.9@HBS1L	ENST00000367822.9	protein_coding	135054649,135050582,135042001,135039573,135035857	135054884,135050647,135042126,135039767,135038026	Gene ID= ENSG00000112339.14 TPM= 1.06 Transcript Type= protein_coding
chr6	134964633	135054819	134964633	135054819	-	ENST00000367826.6@HBS1L	ENST00000367826.6	protein_coding	135054649,135050582,135039573,135002734,134997397,134996777,134993758,134987645,134986736,134986066,134985341,134982458,134979178,134978679,134969238,134966329,134964633	135054819,135050647,135039767,135002842,134997656,134996942,134993875,134987791,134986810,134986183,134985409,134982562,134979268,134978787,134969338,134966473,134965290	Gene ID= ENSG00000112339.14 TPM= 3.54 Transcript Type= protein_coding
chr6	135285296	135497776	135285296	135497776	-	ENST00000265602.10@AHI1	ENST00000265602.10	protein_coding	135497583,135497188,135495814,135492228,135490623,135467581,135465814,135463125,135457494,135455734,135453341,135448290,135447008,135442582,135438375,135433027,135431208,135429882,135428629,135427167,135411348,135404951,135394776,135358132,135323162,135318519,135300500,135290423,135285296	135497776,135497249,135495898,135492291,135490747,135467634,135466373,135463306,135457713,135455926,135453436,135448475,135447160,135442714,135438498,135433256,135431314,135430000,135428759,135427307,135411544,135404977,135394896,135358187,135323324,135318616,135300558,135290525,135285647	Gene ID= ENSG00000135541.20 TPM= 1.06 Transcript Type= protein_coding
chr6	135283986	135497765	135283986	135497765	-	ENST00000457866.6@AHI1	ENST00000457866.6	protein_coding	135497583,135497188,135492228,135490623,135467581,135465814,135463125,135457494,135455734,135453341,135448290,135447008,135442582,135438375,135433027,135431208,135429882,135428629,135427167,135411348,135404951,135394776,135358132,135323162,135318519,135300500,135290423,135283986	135497765,135497249,135492291,135490747,135467634,135466373,135463306,135457713,135455926,135453436,135448475,135447160,135442714,135438498,135433256,135431314,135430000,135428759,135427307,135411544,135404977,135394896,135358187,135323324,135318616,135300558,135290525,135285647	Gene ID= ENSG00000135541.20 TPM= 1.06 Transcript Type= protein_coding
chr6	136256863	136289851	136256863	136289851	-	ENST00000531224.5@BCLAF1	ENST00000531224.5	protein_coding	136289713,136282584,136279763,136277865,136275843,136275532,136273082,136271995,136269437,136268162,136267029,136261265,136256863	136289851,136282687,136279876,136278776,136276508,136275701,136273187,136272079,136269612,136268339,136267175,136261477,136261115	Gene ID= ENSG00000029363.16 TPM= 3.19 Transcript Type= protein_coding
chr6	136269264	136289851	136269264	136289851	-	ENST00000628517.2@BCLAF1	ENST00000628517.2	protein_coding	136289713,136282584,136279763,136277865,136275843,136275532,136273082,136271995,136269437,136269264	136289851,136282687,136279876,136278776,136276508,136275701,136273187,136272079,136269612,136269303	Gene ID= ENSG00000029363.16 TPM= 1.06 Transcript Type= protein_coding
chr6	136822547	136913937	136822547	136913937	+	transcript4310.chr6.nnic@PEX7	transcript4310.chr6.nnic	protein_coding	136822547,136825214,136826319,136869890,136872198,136898142,136913458	136822795,136825271,136826469,136870003,136872253,136898241,136913937	Gene ID= ENSG00000112357.12 TPM= 2.12 Transcript Type= NA
chr6	136822585	136913937	136822585	136913937	+	ENST00000318471.4@PEX7	ENST00000318471.4	protein_coding	136822585,136825214,136826319,136845615,136846073,136866627,136869890,136872198,136898142,136913458	136822795,136825271,136826469,136845692,136846181,136866733,136870003,136872253,136898241,136913937	Gene ID= ENSG00000112357.12 TPM= 14.87 Transcript Type= protein_coding
chr6	137197484	137219449	137197484	137219449	-	ENST00000367739.8@IFNGR1	ENST00000367739.8	protein_coding	137219243,137206963,137206136,137204332,137203499,137200881,137197484	137219449,137207077,137206308,137204504,137203685,137201008,137198639	Gene ID= ENSG00000027697.13 TPM= 155.52 Transcript Type= protein_coding
chr6	137867188	137883311	137867188	137883311	+	ENST00000612899.4@TNFAIP3	ENST00000612899.4	protein_coding	137867188,137871213,137874845,137875688,137875996,137877076,137878432,137880071,137881035	137867542,137871522,137875035,137875835,137876166,137877256,137879351,137880252,137883311	Gene ID= ENSG00000118503.14 TPM= 4.25 Transcript Type= protein_coding
chr6	138422043	138572540	138422043	138572540	-	ENST00000427025.6@NHSL1	ENST00000427025.6	protein_coding	138571710,138496219,138473306,138447001,138430393,138429711,138422043	138572540,138496371,138473433,138447193,138433680,138429843,138424816	Gene ID= ENSG00000135540.11 TPM= 58.95 Transcript Type= protein_coding
chr6	138864731	138905754	138864731	138905754	+	transcript4375.chr6.nnic@ECT2L	transcript4375.chr6.nnic	protein_coding	138864731,138868103,138876472,138880957,138882724,138885506,138885674,138886857,138888943,138900948,138902500,138905555	138865178,138868206,138876558,138881171,138882871,138885579,138885830,138886922,138889031,138901120,138903076,138905754	Gene ID= ENSG00000203734.11 TPM= 2.12 Transcript Type= NA
chr6	138864867	138903484	138864867	138903484	+	transcript4380.chr6.nic@ECT2L	transcript4380.chr6.nic	protein_coding	138864867,138868103,138876472,138880957,138882724,138885506,138885674,138886857,138888943,138900948,138902500	138865178,138868206,138876558,138881171,138882871,138885579,138885830,138886922,138889031,138901120,138903484	Gene ID= ENSG00000203734.11 TPM= 3.19 Transcript Type= NA
chr6	138864874	138907797	138864874	138907797	+	transcript4384.chr6.nnic@ECT2L	transcript4384.chr6.nnic	protein_coding	138864874,138868103,138876472,138880957,138882724,138886857,138888943,138900948,138902500,138905555	138865178,138868206,138876558,138881171,138882871,138886922,138889031,138901120,138903076,138907797	Gene ID= ENSG00000203734.11 TPM= 2.12 Transcript Type= NA
chr6	138864874	138868257	138864874	138868257	+	transcript4388.chr6.nic@ECT2L	transcript4388.chr6.nic	protein_coding	138864874,138868103	138865178,138868257	Gene ID= ENSG00000203734.11 TPM= 2.12 Transcript Type= NA
chr6	138904866	138988276	138904866	138988276	-	transcript4363.chr6.nic@REPS1	transcript4363.chr6.nic	protein_coding	138987530,138947790,138945501,138945219,138944498,138943853,138943513,138941335,138929977,138926401,138921037,138920215,138917555,138915858,138914697,138912765,138911276,138908668,138904866	138988276,138947913,138945697,138945372,138944622,138944015,138943576,138941489,138930098,138926481,138921124,138920316,138917627,138915976,138914761,138912950,138911371,138908816,138905132	Gene ID= ENSG00000135597.18 TPM= 3 Transcript Type= NA
chr6	138904870	138988276	138904870	138988276	-	transcript4365.chr6.nnic@REPS1	transcript4365.chr6.nnic	protein_coding	138987530,138947790,138945501,138945219,138944561,138943853,138943513,138941335,138929977,138921037,138920215,138917555,138915858,138914697,138912765,138911276,138908668,138907495,138904870	138988276,138947913,138945697,138945372,138944622,138944015,138943576,138941489,138930098,138921124,138920316,138917627,138915976,138914761,138912950,138911371,138908816,138907600,138905132	Gene ID= ENSG00000135597.18 TPM= 4.41 Transcript Type= NA
chr6	138904866	138988276	138904866	138988276	-	transcript4367.chr6.nic@REPS1	transcript4367.chr6.nic	protein_coding	138987530,138947790,138945501,138945219,138944498,138943853,138943513,138941335,138929977,138921037,138920215,138917555,138915858,138914697,138912765,138911276,138908668,138904866	138988276,138947913,138945697,138945372,138944622,138944015,138943576,138941489,138930098,138921124,138920316,138917627,138915976,138914761,138912950,138911371,138908816,138905132	Gene ID= ENSG00000135597.18 TPM= 4.06 Transcript Type= NA
chr6	138920710	138988276	138920710	138988276	-	transcript4385.chr6.nic@REPS1	transcript4385.chr6.nic	protein_coding	138987530,138947790,138945501,138945219,138944498,138943853,138943513,138941335,138929977,138920710	138988276,138947913,138945697,138945372,138944622,138944015,138943576,138941489,138930098,138921124	Gene ID= ENSG00000135597.18 TPM= 3 Transcript Type= NA
chr6	138904870	138988261	138904870	138988261	-	ENST00000258062.9@REPS1	ENST00000258062.9	protein_coding	138987530,138947790,138945501,138945219,138944498,138943853,138943513,138941335,138929977,138926401,138921037,138920215,138917555,138915858,138914697,138912765,138911276,138908668,138907495,138904870	138988261,138947913,138945697,138945372,138944622,138944015,138943576,138941489,138930098,138926481,138921124,138920316,138917624,138915976,138914761,138912950,138911371,138908816,138907600,138905132	Gene ID= ENSG00000135597.18 TPM= 10.52 Transcript Type= protein_coding
chr6	138904861	138988211	138904861	138988211	-	ENST00000445570.5@REPS1	ENST00000445570.5	protein_coding	138987530,138947790,138945501,138945219,138941335,138929977,138921037,138920215,138917555,138915858,138914697,138912765,138911276,138908668,138907495,138904861	138988211,138947913,138945697,138945372,138941489,138930098,138921124,138920316,138917627,138915976,138914761,138912950,138911371,138908816,138907600,138905132	Gene ID= ENSG00000135597.18 TPM= 1.59 Transcript Type= nonsense_mediated_decay
chr6	139028205	139029498	139028205	139029498	-	transcript4389.chr6.nnic@NA	transcript4389.chr6.nnic	NA	139028205	139029498	Gene ID= novel_gene_chr6_4390 TPM= 2.12 Transcript Type= NA
chr6	139135112	139180802	139135112	139180802	+	ENST00000367658.2@HECA	ENST00000367658.2	protein_coding	139135112,139166284,139174385,139176941	139135667,139167324,139174539,139180802	Gene ID= ENSG00000112406.4 TPM= 58.42 Transcript Type= protein_coding
chr6	139191146	139192775	139191146	139192775	+	transcript4396.chr6.nnic@NA	transcript4396.chr6.nnic	NA	139191146	139192775	Gene ID= novel_gene_chr6_4397 TPM= 2.12 Transcript Type= NA
chr6	139240061	139292139	139240061	139292139	-	ENST00000358430.7@TXLNB	ENST00000358430.7	protein_coding	139291921,139288476,139276830,139270456,139262579,139260318,139255564,139247817,139244595,139240061	139292139,139288913,139276921,139270626,139262773,139260437,139255638,139247909,139244690,139243314	Gene ID= ENSG00000164440.14 TPM= 139.14 Transcript Type= protein_coding
chr6	139247533	139292062	139247533	139292062	-	transcript4402.chr6.nic@TXLNB	transcript4402.chr6.nic	protein_coding	139291921,139288476,139276830,139270456,139262579,139260318,139255564,139247533	139292062,139288913,139276921,139270626,139262773,139260437,139255638,139247909	Gene ID= ENSG00000164440.14 TPM= 6.37 Transcript Type= NA
chr6	140079491	140093721	140079491	140093721	+	transcript4414.chr6.nnic@AL138737.1	transcript4414.chr6.nnic	lincRNA	140079491,140086682,140092991	140079598,140086756,140093721	Gene ID= ENSG00000236013.5 TPM= 14.87 Transcript Type= NA
chr6	141403431	141410050	141403431	141410050	+	transcript4418.chr6.nnic@NA	transcript4418.chr6.nnic	NA	141403431	141410050	Gene ID= novel_gene_chr6_4419 TPM= 2.12 Transcript Type= NA
chr6	142147230	142224689	142147230	142224689	+	ENST00000367630.8@VTA1	ENST00000367630.8	protein_coding	142147230,142166228,142169550,142170346,142189426,142198439,142203985,142218498	142147399,142166322,142169677,142170421,142189534,142198615,142204065,142224689	Gene ID= ENSG00000009844.15 TPM= 6.37 Transcript Type= protein_coding
chr6	142147162	142220946	142147162	142220946	+	ENST00000620996.4@VTA1	ENST00000620996.4	protein_coding	142147162,142166228,142169550,142170346,142189426,142198439,142218498	142147399,142166322,142169677,142170421,142189534,142198615,142220946	Gene ID= ENSG00000009844.15 TPM= 3.19 Transcript Type= protein_coding
chr6	142147226	142172989	142147226	142172989	+	transcript4430.chr6.nic@VTA1	transcript4430.chr6.nic	protein_coding	142147226,142166228,142169550,142170346	142147399,142166322,142169677,142172989	Gene ID= ENSG00000009844.15 TPM= 2.12 Transcript Type= NA
chr6	142751469	142774413	142751469	142774413	-	transcript4433.chr6.nic@HIVEP2	transcript4433.chr6.nic	protein_coding	142769552,142768382,142764799,142761464,142759772,142751469	142774413,142768536,142764974,142761565,142760667,142753931	Gene ID= ENSG00000010818.9 TPM= 9.56 Transcript Type= NA
chr6	143060850	143340304	143060850	143340304	+	transcript4436.chr6.nnic@AIG1	transcript4436.chr6.nnic	protein_coding	143060850,143095929,143136835,143165082,143284110,143333282,143339639	143061066,143096069,143136990,143165183,143284225,143333445,143340304	Gene ID= ENSG00000146416.17 TPM= 2.12 Transcript Type= NA
chr6	143060901	143061606	143060901	143061606	+	ENST00000367596.5@AIG1	ENST00000367596.5	protein_coding	143060901,143061214	143061066,143061606	Gene ID= ENSG00000146416.17 TPM= 2.12 Transcript Type= protein_coding
chr6	143060876	143340304	143060876	143340304	+	ENST00000357847.8@AIG1	ENST00000357847.8	protein_coding	143060876,143136835,143165082,143284110,143333282,143339639	143061066,143136990,143165183,143284225,143333445,143340304	Gene ID= ENSG00000146416.17 TPM= 21.24 Transcript Type= protein_coding
chr6	143060901	143190597	143060901	143190597	+	ENST00000494282.6@AIG1	ENST00000494282.6	protein_coding	143060901,143136835,143165082,143187629	143061066,143136990,143165183,143190597	Gene ID= ENSG00000146416.17 TPM= 4.25 Transcript Type= protein_coding
chr6	143426989	143450673	143426989	143450673	-	ENST00000237283.8@ADAT2	ENST00000237283.8	protein_coding	143450563,143438590,143433831,143432505,143428612,143426989	143450673,143438694,143433981,143432611,143428684,143428506	Gene ID= ENSG00000189007.15 TPM= 1.06 Transcript Type= protein_coding
chr6	143495487	143511756	143495487	143511756	-	transcript4460.chr6.nnic@FUCA2	transcript4460.chr6.nnic	protein_coding	143511411,143507237,143503913,143502355,143501932,143497389,143495968,143495487	143511756,143507424,143504252,143502565,143502122,143497497,143496128,143495847	Gene ID= ENSG00000001036.13 TPM= 5.31 Transcript Type= NA
chr6	143495487	143511717	143495487	143511717	-	transcript4463.chr6.nnic@FUCA2	transcript4463.chr6.nnic	protein_coding	143511411,143507237,143503913,143502355,143501932,143497389,143495487	143511717,143507424,143504085,143502565,143502122,143497497,143495847	Gene ID= ENSG00000001036.13 TPM= 3.19 Transcript Type= NA
chr6	143505308	143511705	143505308	143511705	-	transcript4473.chr6.nnic@FUCA2	transcript4473.chr6.nnic	protein_coding	143511411,143506344,143505308	143511705,143507424,143506213	Gene ID= ENSG00000001036.13 TPM= 3.19 Transcript Type= NA
chr6	143494811	143511690	143494811	143511690	-	ENST00000002165.10@FUCA2	ENST00000002165.10	protein_coding	143511411,143507237,143503913,143502355,143501932,143497389,143494811	143511690,143507424,143504252,143502565,143502122,143497497,143495847	Gene ID= ENSG00000001036.13 TPM= 1.06 Transcript Type= protein_coding
chr6	143677955	143777377	143677955	143777377	+	transcript4492.chr6.nic@PHACTR2	transcript4492.chr6.nic	protein_coding	143677955,143712016,143748985,143753754,143765261,143772258,143774059,143777328	143678209,143712183,143749065,143753912,143765798,143772457,143774215,143777377	Gene ID= ENSG00000112419.14 TPM= 2.12 Transcript Type= NA
chr6	143677965	143824121	143677965	143824121	+	ENST00000440869.6@PHACTR2	ENST00000440869.6	protein_coding	143677965,143712016,143748985,143753754,143760401,143765261,143772258,143774059,143777328,143783219,143788773,143807057,143823674	143678209,143712183,143749065,143753912,143760640,143765798,143772457,143774215,143777383,143783280,143788910,143807133,143824121	Gene ID= ENSG00000112419.14 TPM= 3.19 Transcript Type= protein_coding
chr6	143677992	143680136	143677992	143680136	+	transcript4501.chr6.nnic@NA	transcript4501.chr6.nnic	NA	143677992	143680136	Gene ID= novel_gene_chr6_4502 TPM= 2.12 Transcript Type= NA
chr6	143826248	143830828	143826248	143830828	+	transcript4499.chr6.nnic@NA	transcript4499.chr6.nnic	NA	143826248	143830828	Gene ID= novel_gene_chr6_4500 TPM= 25.49 Transcript Type= NA
chr6	143843344	143863812	143843344	143863812	+	ENST00000367576.5@LTV1	ENST00000367576.5	protein_coding	143843344,143844486,143846051,143850131,143857303,143857752,143860426,143862104,143862844,143863086,143863417	143843480,143844617,143846224,143850218,143857444,143858007,143860553,143862243,143862896,143863286,143863812	Gene ID= ENSG00000135521.8 TPM= 43.55 Transcript Type= protein_coding
chr6	144094881	144095573	144094881	144095573	-	ENST00000367569.3@SF3B5	ENST00000367569.3	protein_coding	144094881	144095573	Gene ID= ENSG00000169976.6 TPM= 66.92 Transcript Type= protein_coding
chr6	144150526	144188370	144150526	144188370	+	ENST00000367568.4@STX11	ENST00000367568.4	protein_coding	144150526,144186623	144150703,144188370	Gene ID= ENSG00000135604.9 TPM= 7.44 Transcript Type= protein_coding
chr6	144284952	144516882	144284952	144516882	+	transcript4514.chr6.nic@UTRN	transcript4514.chr6.nic	protein_coding	144284952,144291737,144403123,144421878,144423549,144423986,144426287,144428778,144429581,144435935,144437565,144438745,144440352,144444281,144447211,144447602,144448600,144451370,144453782,144458770,144459174,144461197,144462654,144473720,144474604,144479812,144482209,144485385,144487548,144488673,144490071,144490929,144493301,144499257,144510944,144513909,144514650,144516229,144516811	144285821,144291907,144403184,144421970,144423626,144424078,144426459,144428893,144429741,144436138,144437746,144438895,144440471,144444382,144447318,144447781,144448769,144451493,144453869,144459011,144459354,144461342,144462866,144473833,144474759,144479982,144482388,144485519,144487697,144488834,144490199,144491102,144493456,144499427,144511123,144514037,144514820,144516387,144516882	Gene ID= ENSG00000152818.18 TPM= 13.28 Transcript Type= NA
chr6	144307819	144309852	144307819	144309852	-	transcript4518.chr6.nnic@NA	transcript4518.chr6.nnic	NA	144307819	144309852	Gene ID= novel_gene_chr6_4519 TPM= 3.19 Transcript Type= NA
chr6	144291829	144853034	144291829	144853034	+	ENST00000367545.7@UTRN	ENST00000367545.7	protein_coding	144291829,144403123,144421878,144423549,144423986,144426287,144428778,144429581,144435935,144437565,144438745,144440352,144444281,144447211,144447602,144448600,144451370,144453782,144458770,144459174,144461197,144462654,144473720,144474604,144479812,144482209,144485385,144487548,144488673,144490071,144490929,144493301,144499257,144510944,144513909,144514650,144516229,144516811,144521980,144523016,144531052,144533085,144537582,144539294,144542795,144548640,144550965,144554688,144557157,144577099,144678406,144700087,144730357,144748246,144751806,144754720,144757929,144771907,144774290,144781922,144789194,144793834,144797824,144803036,144820882,144827348,144827611,144828790,144835780,144836301,144839173,144840740,144846805,144850989	144291907,144403184,144421970,144423626,144424078,144426459,144428893,144429741,144436138,144437746,144438895,144440471,144444382,144447318,144447781,144448769,144451493,144453869,144459011,144459354,144461342,144462866,144473833,144474759,144479982,144482388,144485519,144487697,144488834,144490199,144491102,144493456,144499427,144511123,144514037,144514820,144516387,144516948,144522171,144523188,144531202,144533260,144537717,144539443,144542870,144548854,144551082,144554893,144557311,144577288,144678578,144700243,144730486,144748514,144751952,144754798,144757989,144771968,144774364,144782123,144789279,144793991,144797990,144803147,144821018,144827386,144827676,144828855,144835938,144836541,144839284,144840832,144846827,144853034	Gene ID= ENSG00000152818.18 TPM= 3.19 Transcript Type= protein_coding
chr6	145625304	145735855	145625304	145735855	-	ENST00000367519.8@EPM2A	ENST00000367519.8	protein_coding	145735198,145686122,145635245,145625304	145735855,145686296,145635486,145627693	Gene ID= ENSG00000112425.14 TPM= 47.8 Transcript Type= protein_coding
chr6	145625491	145735498	145625491	145735498	-	ENST00000638262.1@EPM2A	ENST00000638262.1	protein_coding	145735198,145686122,145625491	145735498,145686296,145627693	Gene ID= ENSG00000112425.14 TPM= 13.81 Transcript Type= protein_coding
chr6	145884807	145964389	145884807	145964389	-	ENST00000367505.6@SHPRH	ENST00000367505.6	protein_coding	145964157,145954690,145952349,145950264,145948272,145947493,145946233,145945381,145943143,145941623,145940723,145935278,145934907,145933057,145927189,145926204,145924739,145923643,145922663,145922286,145921167,145919348,145918131,145913478,145910448,145894885,145894150,145893215,145888020,145884807	145964389,145955354,145952478,145950482,145948350,145947643,145946341,145945637,145943802,145941874,145940801,145935441,145935163,145933178,145927277,145926296,145924846,145923785,145922836,145922348,145921392,145919491,145918232,145913549,145910636,145894977,145894236,145893393,145888100,145886787	Gene ID= ENSG00000146414.15 TPM= 2.12 Transcript Type= protein_coding
chr6	146543693	146554965	146543693	146554965	+	ENST00000367495.3@RAB32	ENST00000367495.3	protein_coding	146543693,146549464,146554456	146544121,146549741,146554965	Gene ID= ENSG00000118508.4 TPM= 16.99 Transcript Type= protein_coding
chr6	146543767	146544815	146543767	146544815	+	transcript4555.chr6.nnic@NA	transcript4555.chr6.nnic	NA	146543767	146544815	Gene ID= novel_gene_chr6_4556 TPM= 6.37 Transcript Type= NA
chr6	148342593	148552050	148342593	148552050	+	ENST00000367467.7@SASH1	ENST00000367467.7	protein_coding	148342593,148390134,148440184,148440358,148468545,148471417,148474110,148487614,148514324,148519547,148525291,148527453,148531526,148532797,148533771,148534751,148540443,148543680,148546015,148548295	148343223,148390262,148440234,148440407,148468585,148471503,148474222,148487715,148514456,148519893,148525365,148527596,148531661,148532966,148533980,148534901,148540556,148544818,148546146,148552050	Gene ID= ENSG00000111961.17 TPM= 16.99 Transcript Type= protein_coding
chr6	148342561	148346500	148342561	148346500	+	transcript4565.chr6.nnic@NA	transcript4565.chr6.nnic	NA	148342561	148346500	Gene ID= novel_gene_chr6_4566 TPM= 2.12 Transcript Type= NA
chr6	149317620	149411382	149317620	149411382	+	ENST00000637181.1@TAB2	ENST00000637181.1	protein_coding	149317620,149369909,149378018,149397604,149397969,149399104,149409577	149318015,149370099,149379518,149397764,149398062,149399184,149411382	Gene ID= ENSG00000055208.18 TPM= 6.37 Transcript Type= protein_coding
chr6	149504733	149546038	149504733	149546038	-	ENST00000253329.2@PPIL4	ENST00000253329.2	protein_coding	149545936,149541519,149541367,149540942,149535596,149534678,149533458,149526652,149525143,149521060,149517354,149512155,149504733	149546038,149541586,149541431,149541059,149535738,149534774,149533574,149526776,149525209,149521171,149517450,149512302,149505704	Gene ID= ENSG00000131013.3 TPM= 11.68 Transcript Type= protein_coding
chr6	149543612	149546079	149543612	149546079	-	transcript4583.chr6.nnic@NA	transcript4583.chr6.nnic	NA	149543612	149546079	Gene ID= novel_gene_chr6_4584 TPM= 3.19 Transcript Type= NA
chr6	149566294	149591748	149566294	149591748	+	ENST00000367419.9@GINM1	ENST00000367419.9	protein_coding	149566294,149572285,149572507,149578822,149579834,149580593,149582440,149590727	149566534,149572344,149572603,149578973,149579990,149580723,149582603,149591748	Gene ID= ENSG00000055211.12 TPM= 81.79 Transcript Type= protein_coding
chr6	149594877	149648804	149594877	149648804	-	ENST00000367411.6@KATNA1	ENST00000367411.6	protein_coding	149648469,149638386,149632759,149623103,149604661,149603268,149601594,149598224,149597507,149597063,149594877	149648804,149638560,149632916,149623283,149604782,149603373,149601752,149598350,149597641,149597189,149595234	Gene ID= ENSG00000186625.13 TPM= 32.93 Transcript Type= protein_coding
chr6	149682919	149718105	149682919	149718105	-	ENST00000392273.7@LATS1	ENST00000392273.7	protein_coding	149717849,149701779,149695074,149682919	149718105,149702266,149695221,149684592	Gene ID= ENSG00000131023.12 TPM= 2.12 Transcript Type= protein_coding
chr6	149717621	149718888	149717621	149718888	+	ENST00000623174.1@AL358852.1	ENST00000623174.1	antisense_RNA	149717621	149718888	Gene ID= ENSG00000278899.1 TPM= 2.12 Transcript Type= antisense_RNA
chr6	149724318	149746552	149724318	149746552	-	transcript4604.chr6.nnic@NUP43	transcript4604.chr6.nnic	protein_coding	149746376,149745940,149743638,149742390,149738643,149736471,149731613,149725609,149724318	149746552,149746062,149743715,149742570,149738778,149736622,149731735,149727198,149724601	Gene ID= ENSG00000120253.13 TPM= 8.5 Transcript Type= NA
chr6	149724315	149746572	149724315	149746572	-	ENST00000340413.6@NUP43	ENST00000340413.6	protein_coding	149746376,149745940,149743638,149742390,149738643,149736471,149731613,149724315	149746572,149746062,149743715,149742570,149738778,149736622,149731735,149727198	Gene ID= ENSG00000120253.13 TPM= 10.62 Transcript Type= protein_coding
chr6	149749443	149811420	149749443	149811420	+	ENST00000367384.6@PCMT1	ENST00000367384.6	protein_coding	149749443,149771162,149773138,149789954,149793549,149796415,149802200,149810616	149749956,149771266,149773169,149790058,149793669,149796500,149802369,149811420	Gene ID= ENSG00000120265.16 TPM= 43.9 Transcript Type= protein_coding
chr6	149749444	149811420	149749444	149811420	+	ENST00000464889.5@PCMT1	ENST00000464889.5	protein_coding	149749444,149771162,149773138,149789954,149793549,149796415,149802200,149810616	149749956,149771266,149773169,149790058,149793669,149796500,149802416,149811420	Gene ID= ENSG00000120265.16 TPM= 238.27 Transcript Type= protein_coding
chr6	149749444	149802530	149749444	149802530	+	ENST00000367378.5@PCMT1	ENST00000367378.5	protein_coding	149749444,149771162,149773138,149789954,149793549,149796415,149802200	149749956,149771266,149773169,149790058,149793669,149796500,149802530	Gene ID= ENSG00000120265.16 TPM= 28.33 Transcript Type= protein_coding
chr6	149749695	149811420	149749695	149811420	+	ENST00000544496.5@PCMT1	ENST00000544496.5	protein_coding	149749695,149771162,149773138,149793549,149796415,149802200,149810616	149749956,149771266,149773169,149793669,149796500,149802416,149811420	Gene ID= ENSG00000120265.16 TPM= 3.9 Transcript Type= protein_coding
chr6	149825658	149864359	149825658	149864359	-	transcript4627.chr6.nic@LRP11	transcript4627.chr6.nic	protein_coding	149863408,149853003,149842983,149837338,149836085,149825658	149864359,149853160,149843124,149837463,149836297,149826359	Gene ID= ENSG00000120256.9 TPM= 3.19 Transcript Type= NA
chr6	149818798	149864026	149818798	149864026	-	ENST00000239367.6@LRP11	ENST00000239367.6	protein_coding	149863408,149853003,149842983,149837338,149836085,149826264,149818798	149864026,149853160,149843124,149837463,149836297,149826359,149820703	Gene ID= ENSG00000120256.9 TPM= 2.12 Transcript Type= protein_coding
chr6	149942000	149949235	149942000	149949235	+	ENST00000367351.3@ULBP2	ENST00000367351.3	protein_coding	149942000,149945309,149946372,149947320,149948723	149942157,149945572,149946653,149947451,149949235	Gene ID= ENSG00000131015.4 TPM= 7.44 Transcript Type= protein_coding
chr6	150143076	150250357	150143076	150250357	+	ENST00000361131.4@PPP1R14C	ENST00000361131.4	protein_coding	150143076,150214744,150216824,150248746	150143498,150214827,150216856,150250357	Gene ID= ENSG00000198729.4 TPM= 230.49 Transcript Type= protein_coding
chr6	150170780	150173198	150170780	150173198	-	transcript4645.chr6.nnic@NA	transcript4645.chr6.nnic	NA	150170780	150173198	Gene ID= novel_gene_chr6_4646 TPM= 2.12 Transcript Type= NA
chr6	150204998	150206214	150204998	150206214	-	transcript4643.chr6.nnic@NA	transcript4643.chr6.nnic	NA	150204998	150206214	Gene ID= novel_gene_chr6_4644 TPM= 5.31 Transcript Type= NA
chr6	150230364	150231955	150230364	150231955	+	transcript4641.chr6.nnic@NA	transcript4641.chr6.nnic	NA	150230364	150231955	Gene ID= novel_gene_chr6_4642 TPM= 2.12 Transcript Type= NA
chr6	150865716	150899021	150865716	150899021	+	ENST00000367307.8@MTHFD1L	ENST00000367307.8	protein_coding	150865716,150876090,150877634,150877773,150882762,150885634,150887845,150898860	150866049,150876174,150877684,150877826,150882886,150885734,150887981,150899021	Gene ID= ENSG00000120254.15 TPM= 2.12 Transcript Type= protein_coding
chr6	151240223	151349374	151240223	151349374	+	transcript4655.chr6.nic@AKAP12	transcript4655.chr6.nic	protein_coding	151240223,151305747,151348711	151240724,151305903,151349374	Gene ID= ENSG00000131016.16 TPM= 2.12 Transcript Type= NA
chr6	151239999	151358557	151239999	151358557	+	ENST00000402676.6@AKAP12	ENST00000402676.6	protein_coding	151239999,151240384,151305747,151348711,151355727	151240059,151240724,151305903,151353752,151358557	Gene ID= ENSG00000131016.16 TPM= 3.19 Transcript Type= protein_coding
chr6	151240357	151351915	151240357	151351915	-	transcript4656.chr6.nnic@RNU6-1247P	transcript4656.chr6.nnic	snRNA	151348711,151305745,151240357	151351915,151305903,151240724	Gene ID= ENSG00000252431.1 TPM= 8.5 Transcript Type= NA
chr6	151364118	151391659	151364118	151391659	-	transcript4663.chr6.nnic@ZBTB2	transcript4663.chr6.nnic	protein_coding	151391420,151364118	151391659,151366892	Gene ID= ENSG00000181472.4 TPM= 2.12 Transcript Type= NA
chr6	151364117	151391548	151364117	151391548	-	ENST00000325144.4@ZBTB2	ENST00000325144.4	protein_coding	151391420,151373465,151364117	151391548,151373649,151366892	Gene ID= ENSG00000181472.4 TPM= 8.5 Transcript Type= protein_coding
chr6	151400963	151403065	151400963	151403065	+	transcript4674.chr6.nnic@NA	transcript4674.chr6.nnic	NA	151400963	151403065	Gene ID= novel_gene_chr6_4675 TPM= 2.12 Transcript Type= NA
chr6	151404763	151452181	151404763	151452181	-	ENST00000622845.4@RMND1	ENST00000622845.4	protein_coding	151452016,151436446,151433155,151430138,151427482,151423525,151422541,151421245,151417279,151405720,151404763	151452181,151436554,151433230,151430177,151427582,151423631,151422605,151421321,151417399,151405836,151405267	Gene ID= ENSG00000155906.16 TPM= 4.25 Transcript Type= protein_coding
chr6	151416421	151452181	151416421	151452181	-	transcript4671.chr6.nic@RMND1	transcript4671.chr6.nic	protein_coding	151452016,151445308,151436446,151433155,151430138,151427482,151423525,151422541,151421245,151416421	151452181,151445825,151436554,151433230,151430177,151427582,151423631,151422605,151421321,151417399	Gene ID= ENSG00000155906.16 TPM= 2.12 Transcript Type= NA
chr6	151404854	151452124	151404854	151452124	-	ENST00000367303.8@RMND1	ENST00000367303.8	protein_coding	151452016,151445308,151436446,151433155,151430138,151427482,151423525,151422541,151421245,151417279,151405720,151404854	151452124,151445825,151436554,151433230,151430177,151427582,151423631,151422605,151421321,151417399,151405836,151405267	Gene ID= ENSG00000155906.16 TPM= 18.06 Transcript Type= protein_coding
chr6	151452287	151470101	151452287	151470101	+	ENST00000367294.3@ARMT1	ENST00000367294.3	protein_coding	151452287,151454548,151458328,151464453,151468343	151452586,151454653,151458572,151464618,151470101	Gene ID= ENSG00000146476.10 TPM= 26.02 Transcript Type= protein_coding
chr6	151452258	151470097	151452258	151470097	+	ENST00000545879.5@ARMT1	ENST00000545879.5	protein_coding	151452258,151458328,151464453,151468343	151452586,151458572,151464618,151470097	Gene ID= ENSG00000146476.10 TPM= 1.59 Transcript Type= protein_coding
chr6	152122357	152168351	152122357	152168351	-	ENST00000354674.4@SYNE1	ENST00000354674.4	protein_coding	152168113,152164163,152155910,152154892,152151959,152151553,152149477,152148045,152145487,152143623,152141203,152139950,152136618,152135104,152133276,152132122,152130720,152122357	152168351,152164325,152156097,152155042,152152141,152151690,152149668,152148378,152145555,152143765,152141329,152140161,152136818,152135232,152133488,152132214,152130778,152122676	Gene ID= ENSG00000131018.22 TPM= 3.19 Transcript Type= protein_coding
chr6	152138287	152146050	152138287	152146050	-	transcript4687.chr6.nnic@SYNE1	transcript4687.chr6.nnic	protein_coding	152145492,152143623,152141203,152138287	152146050,152143770,152141329,152140161	Gene ID= ENSG00000131018.22 TPM= 4.25 Transcript Type= NA
chr6	152140606	152146050	152140606	152146050	+	transcript4690.chr6.nnic@NA	transcript4690.chr6.nnic	NA	152140606,152145492	152143770,152146050	Gene ID= novel_gene_chr6_4691 TPM= 3.19 Transcript Type= NA
chr6	152277502	152302269	152277502	152302269	-	ENST00000489156.1@SYNE1	ENST00000489156.1	protein_coding	152301869,152293960,152293588,152283978,152281807,152277502	152302269,152294127,152293749,152284184,152281980,152278280	Gene ID= ENSG00000131018.22 TPM= 1.06 Transcript Type= retained_intron
chr6	152121684	152637399	152121684	152637399	-	ENST00000367255.9@SYNE1	ENST00000367255.9	protein_coding	152637189,152636638,152628265,152539960,152526080,152520459,152511011,152510193,152505201,152502633,152498742,152488396,152484835,152483085,152472301,152471597,152465982,152465258,152463353,152462738,152461597,152458757,152455886,152455426,152453586,152451047,152450625,152449533,152447458,152444411,152442075,152441130,152435941,152433795,152430482,152430112,152428205,152427693,152425381,152419569,152416387,152413352,152409559,152409068,152407014,152404213,152401138,152399616,152398619,152396775,152395516,152391277,152390280,152387072,152385674,152381006,152376776,152376381,152373037,152369471,152368972,152367218,152364847,152362170,152359315,152358373,152354659,152353589,152353263,152352027,152350618,152350168,152347059,152344081,152339241,152336841,152334008,152329730,152326296,152325958,152325084,152323478,152321721,152321238,152318863,152318081,152316849,152310688,152310396,152309835,152308489,152301869,152300641,152293960,152293588,152283978,152281807,152278089,152269155,152268056,152262032,152256634,152255591,152254880,152249161,152244537,152242240,152239533,152236817,152236107,152234668,152233781,152232116,152231391,152230547,152225721,152224494,152221426,152220842,152219003,152218257,152214906,152213612,152211494,152207972,152206168,152201824,152189252,152180136,152176394,152164163,152155910,152154892,152151959,152151553,152149477,152148045,152143623,152141203,152139950,152136618,152135104,152133276,152132122,152130720,152121684	152637399,152636805,152628554,152540021,152526175,152520542,152511103,152510371,152505397,152502742,152498792,152488503,152484972,152483249,152472413,152471765,152466078,152465460,152463517,152462890,152461740,152458930,152456044,152455590,152453720,152451205,152450833,152449641,152447622,152444578,152442245,152441270,152436101,152433945,152430709,152430210,152428392,152427816,152425547,152419722,152417015,152413531,152409709,152409226,152407196,152404314,152401341,152399823,152398731,152396980,152395671,152391568,152390452,152387381,152385838,152381362,152376912,152376558,152373219,152369614,152369127,152367382,152365019,152362323,152359458,152358537,152354976,152353744,152353433,152352353,152350770,152350335,152347235,152344227,152339366,152337017,152334273,152331890,152326633,152326102,152325302,152323737,152321886,152321390,152319015,152318263,152316986,152310873,152310518,152310017,152308632,152302063,152300781,152294127,152293749,152284172,152281980,152278280,152269286,152268165,152262188,152256765,152255746,152255089,152249262,152244656,152242440,152239706,152236948,152236303,152234800,152233963,152232265,152231567,152230702,152225876,152224664,152221559,152221046,152219185,152218403,152215060,152213759,152211588,152208206,152206362,152201949,152189407,152180294,152176560,152164325,152156097,152155042,152152141,152151690,152149668,152148378,152143765,152141329,152140161,152136818,152135232,152133488,152132214,152130778,152122676	Gene ID= ENSG00000131018.22 TPM= 2.12 Transcript Type= protein_coding
chr6	152366992	152381362	152366992	152381362	-	ENST00000454018.6@SYNE1	ENST00000454018.6	protein_coding	152381006,152376776,152376381,152373037,152369471,152368972,152366992	152381362,152376912,152376558,152373219,152369614,152369127,152367382	Gene ID= ENSG00000131018.22 TPM= 2.12 Transcript Type= protein_coding
chr6	152361101	152370008	152361101	152370008	-	transcript4702.chr6.nnic@SYNE1	transcript4702.chr6.nnic	protein_coding	152367218,152364847,152361101	152370008,152365021,152362323	Gene ID= ENSG00000131018.22 TPM= 4.25 Transcript Type= NA
chr6	152626746	152628058	152626746	152628058	+	transcript4708.chr6.nnic@NA	transcript4708.chr6.nnic	NA	152626746	152628058	Gene ID= novel_gene_chr6_4709 TPM= 2.12 Transcript Type= NA
chr6	152697895	152724567	152697895	152724567	+	ENST00000367245.5@MYCT1	ENST00000367245.5	protein_coding	152697895,152721742	152698098,152724567	Gene ID= ENSG00000120279.6 TPM= 8.5 Transcript Type= protein_coding
chr6	152970529	152983579	152970529	152983579	-	ENST00000367241.3@FBXO5	ENST00000367241.3	protein_coding	152983234,152974907,152973046,152972272,152970529	152983579,152975621,152973136,152972454,152971414	Gene ID= ENSG00000112029.9 TPM= 2.12 Transcript Type= protein_coding
chr6	152988516	153002717	152988516	153002717	-	transcript4722.chr6.nic@MTRF1L	transcript4722.chr6.nic	protein_coding	153002427,152998550,152995136,152994513,152992857,152991185,152988516	153002717,152998629,152995294,152994676,152992974,152991416,152990095	Gene ID= ENSG00000112031.15 TPM= 4.07 Transcript Type= NA
chr6	152987362	153002685	152987362	153002685	-	ENST00000464135.5@MTRF1L	ENST00000464135.5	protein_coding	153002427,152998550,152995136,152994513,152992857,152991185,152987362	153002685,152998629,152995294,152994676,152992974,152991321,152990095	Gene ID= ENSG00000112031.15 TPM= 1.41 Transcript Type= processed_transcript
chr6	154405299	154510576	154405299	154510576	-	transcript4737.chr6.nnic@CNKSR3	transcript4737.chr6.nnic	protein_coding	154510063,154508972,154450095,154442088,154441292,154433466,154430472,154428128,154422915,154422506,154414299,154410934,154410343,154405299	154510576,154509079,154450258,154442290,154441379,154433507,154430591,154428187,154422983,154422652,154414423,154411142,154410432,154406652	Gene ID= ENSG00000153721.18 TPM= 8.5 Transcript Type= NA
chr6	154405299	154410667	154405299	154410667	-	transcript4741.chr6.nic@CNKSR3	transcript4741.chr6.nic	protein_coding	154410343,154405299	154410667,154406652	Gene ID= ENSG00000153721.18 TPM= 10.62 Transcript Type= NA
chr6	154733325	154834060	154733325	154834060	+	ENST00000367178.7@SCAF8	ENST00000367178.7	protein_coding	154733325,154773989,154778001,154787861,154792823,154795009,154801971,154803544,154805369,154808070,154808686,154810015,154815716,154818479,154820177,154822276,154824234,154827172,154830922,154831939	154733930,154774072,154778045,154788022,154792976,154795139,154802147,154803623,154805486,154808201,154808798,154810208,154815816,154818592,154820333,154822409,154824378,154827240,154831140,154834060	Gene ID= ENSG00000213079.9 TPM= 21.24 Transcript Type= protein_coding
chr6	154757911	154761635	154757911	154761635	-	transcript4747.chr6.nnic@NA	transcript4747.chr6.nnic	NA	154757911	154761635	Gene ID= novel_gene_chr6_4748 TPM= 2.12 Transcript Type= NA
chr6	154833355	154908868	154833355	154908868	+	ENST00000460692.2@TIAM2	ENST00000460692.2	protein_coding	154833355,154907730	154833409,154908868	Gene ID= ENSG00000146426.17 TPM= 2.12 Transcript Type= processed_transcript
chr6	155253138	155314509	155253138	155314509	-	transcript4759.chr6.nnic@TFB1M	transcript4759.chr6.nnic	protein_coding	155314296,155311188,155298477,155296953,155285158,155253138	155314509,155311339,155298585,155297104,155285277,155253764	Gene ID= ENSG00000029639.10 TPM= 3.72 Transcript Type= NA
chr6	155283843	155314483	155283843	155314483	-	transcript4761.chr6.nic@TFB1M	transcript4761.chr6.nic	protein_coding	155314117,155311188,155298477,155296953,155283843	155314483,155311339,155298585,155297104,155285277	Gene ID= ENSG00000029639.10 TPM= 2.12 Transcript Type= NA
chr6	155283843	155314509	155283843	155314509	-	transcript4762.chr6.nic@TFB1M	transcript4762.chr6.nic	protein_coding	155314296,155311188,155298477,155296953,155283843	155314509,155311339,155298585,155297104,155285277	Gene ID= ENSG00000029639.10 TPM= 2.66 Transcript Type= NA
chr6	157198509	157208700	157198509	157208700	+	ENST00000636254.1@ARID1B	ENST00000636254.1	protein_coding	157198509,157200705,157203866,157206167	157198907,157201488,157203996,157208700	Gene ID= ENSG00000049618.22 TPM= 2.12 Transcript Type= retained_intron
chr6	157039324	157041825	157039324	157041825	-	transcript4771.chr6.nnic@NA	transcript4771.chr6.nnic	NA	157039324	157041825	Gene ID= novel_gene_chr6_4772 TPM= 2.12 Transcript Type= NA
chr6	157381199	157673937	157381199	157673937	+	transcript4786.chr6.nic@ZDHHC14	transcript4786.chr6.nic	protein_coding	157381199,157542585,157592988,157628448,157632834,157645737,157647259,157653525,157672724	157382266,157542745,157593146,157628486,157632882,157645839,157647368,157653627,157673937	Gene ID= ENSG00000175048.16 TPM= 14.34 Transcript Type= NA
chr6	157381133	157673945	157381133	157673945	+	ENST00000414563.6@ZDHHC14	ENST00000414563.6	protein_coding	157381133,157542585,157592988,157628349,157632834,157645737,157647259,157653525,157672769	157382266,157542745,157593146,157628486,157632882,157645839,157647368,157653627,157673945	Gene ID= ENSG00000175048.16 TPM= 14.34 Transcript Type= protein_coding
chr6	157597041	157601388	157597041	157601388	+	transcript4791.chr6.nnic@NA	transcript4791.chr6.nnic	NA	157597041	157601388	Gene ID= novel_gene_chr6_4792 TPM= 2.12 Transcript Type= NA
chr6	157823079	157944536	157823079	157944536	+	transcript4796.chr6.nnic@SNX9	transcript4796.chr6.nnic	protein_coding	157823079,157867547,157873102,157875051,157888571,157896827,157901898,157906128,157909665,157909908,157921531,157927111,157928599,157932195,157935964,157937434,157938633,157940883,157942791	157823446,157867633,157873176,157875176,157888660,157896998,157902045,157906212,157909790,157910025,157921661,157927214,157928702,157932272,157936040,157937523,157938747,157940974,157944536	Gene ID= ENSG00000130340.15 TPM= 31.86 Transcript Type= NA
chr6	157940562	157942923	157940562	157942923	+	transcript4807.chr6.nnic@NA	transcript4807.chr6.nnic	NA	157940562	157942923	Gene ID= novel_gene_chr6_4808 TPM= 2.12 Transcript Type= NA
chr6	158114471	158168275	158114471	158168275	-	transcript4821.chr6.nic@SERAC1	transcript4821.chr6.nic	protein_coding	158168140,158158273,158155315,158150453,158148865,158146782,158144299,158143056,158130373,158128108,158120425,158119029,158117727,158116185,158114471	158168275,158158364,158155351,158150589,158148954,158146913,158144420,158143184,158130486,158128270,158120575,158119170,158117821,158116282,158114971	Gene ID= ENSG00000122335.13 TPM= 2.12 Transcript Type= NA
chr6	158109515	158168270	158109515	158168270	-	ENST00000367104.7@SERAC1	ENST00000367104.7	protein_coding	158168140,158158273,158155315,158150453,158148865,158146782,158144299,158143056,158130373,158128108,158120425,158119029,158117727,158116185,158114789,158113449,158109515	158168270,158158364,158155351,158150589,158148954,158146913,158144420,158143184,158130486,158128270,158120575,158119170,158117821,158116282,158114971,158113592,158111502	Gene ID= ENSG00000122335.13 TPM= 1.06 Transcript Type= protein_coding
chr6	158168330	158172865	158168330	158172865	+	transcript4823.chr6.nnic@GTF2H5	transcript4823.chr6.nnic	protein_coding	158168330,158170470,158172357	158168395,158170538,158172865	Gene ID= ENSG00000272047.1 TPM= 2.12 Transcript Type= NA
chr6	158312488	158511828	158312488	158511828	+	ENST00000367097.7@TULP4	ENST00000367097.7	protein_coding	158312488,158413065,158429736,158448996,158452134,158461563,158479751,158481055,158489588,158493573,158494753,158498669,158501678,158506578	158314268,158413193,158429897,158449176,158452268,158461729,158479975,158481289,158489732,158493717,158494846,158498812,158504178,158511828	Gene ID= ENSG00000130338.12 TPM= 47.8 Transcript Type= protein_coding
chr6	158560078	158635428	158560078	158635428	+	transcript4830.chr6.nnic@TMEM181	transcript4830.chr6.nnic	protein_coding	158560078,158573420,158580940,158583954,158585304,158589672,158605267,158607244,158608333,158608659,158623550,158625104,158625703,158628408,158629730,158631323,158631810	158560232,158573523,158580995,158584044,158585425,158589782,158605347,158607343,158608463,158608750,158623607,158625206,158625754,158628490,158629819,158631389,158635428	Gene ID= ENSG00000146433.8 TPM= 8.5 Transcript Type= NA
chr6	158636474	158644739	158636474	158644739	-	ENST00000367089.7@DYNLT1	ENST00000367089.7	protein_coding	158644682,158641319,158637771,158637128,158636474	158644739,158641360,158637894,158637205,158636897	Gene ID= ENSG00000146425.10 TPM= 144.45 Transcript Type= protein_coding
chr6	158765748	158819412	158765748	158819412	-	ENST00000367075.3@EZR	ENST00000367075.3	protein_coding	158819317,158818082,158789288,158787108,158785309,158784644,158783520,158776408,158771244,158770764,158769784,158769326,158767261,158765748	158819412,158818166,158789371,158787203,158785583,158784727,158783666,158776504,158771407,158770894,158769944,158769418,158767512,158767078	Gene ID= ENSG00000092820.17 TPM= 257.04 Transcript Type= protein_coding
chr6	158765741	158818227	158765741	158818227	-	ENST00000337147.11@EZR	ENST00000337147.11	protein_coding	158818082,158789288,158787108,158785309,158784644,158783520,158776408,158771244,158770764,158769784,158769326,158767261,158765741	158818227,158789371,158787203,158785583,158784727,158783666,158776504,158771407,158770894,158769944,158769418,158767512,158767078	Gene ID= ENSG00000092820.17 TPM= 150.83 Transcript Type= protein_coding
chr6	158977236	159000166	158977236	159000166	-	ENST00000252655.1@RSPH3	ENST00000252655.1	protein_coding	158999435,158993839,158986280,158983662,158982485,158980774,158978260,158977236	159000166,158993926,158986421,158983807,158982688,158980936,158978346,158977848	Gene ID= ENSG00000130363.11 TPM= 1.06 Transcript Type= protein_coding
chr6	159679064	159693234	159679064	159693234	-	ENST00000367055.8@SOD2	ENST00000367055.8	protein_coding	159693145,159692661,159688126,159684854,159682474,159679064	159693234,159692863,159688242,159685033,159682638,159679298	Gene ID= ENSG00000112096.16 TPM= 3.72 Transcript Type= protein_coding
chr6	159725585	159756319	159725585	159756319	+	ENST00000358372.8@WTAP	ENST00000358372.8	protein_coding	159725585,159736258,159738990,159742088,159743665,159748191,159753460,159755028	159727333,159736295,159739045,159742146,159743792,159748369,159753614,159756319	Gene ID= ENSG00000146457.14 TPM= 20.18 Transcript Type= protein_coding
chr6	159727098	159749415	159727098	159749415	+	transcript4909.chr6.nic@WTAP	transcript4909.chr6.nic	protein_coding	159727098,159736258,159738990,159742088,159743665,159748191	159727333,159736295,159739045,159742146,159743792,159749415	Gene ID= ENSG00000146457.14 TPM= 11.68 Transcript Type= NA
chr6	159727500	159756317	159727500	159756317	+	ENST00000621533.4@WTAP	ENST00000621533.4	protein_coding	159727500,159736258,159738990,159742088,159743665,159748191,159753460,159755028	159727703,159736295,159739045,159742146,159743792,159748369,159753614,159756317	Gene ID= ENSG00000146457.14 TPM= 8.5 Transcript Type= protein_coding
chr6	159727588	159749415	159727588	159749415	+	ENST00000337387.4@WTAP	ENST00000337387.4	protein_coding	159727588,159736258,159738990,159742088,159743665,159748191	159727703,159736295,159739045,159742146,159743792,159749415	Gene ID= ENSG00000146457.14 TPM= 5.31 Transcript Type= protein_coding
chr6	159727566	159749421	159727566	159749421	+	ENST00000631126.2@WTAP	ENST00000631126.2	protein_coding	159727566,159736258,159738990,159742088,159743665,159748191,159748590	159727703,159736295,159739045,159742146,159743792,159748369,159749421	Gene ID= ENSG00000146457.14 TPM= 1.06 Transcript Type= protein_coding
chr6	159760328	159779055	159760328	159779055	+	ENST00000367048.4@ACAT2	ENST00000367048.4	protein_coding	159760328,159762919,159767005,159768511,159775170,159776150,159777302,159778170,159778659	159762142,159763053,159767186,159768628,159775313,159776272,159777456,159778280,159779055	Gene ID= ENSG00000120437.8 TPM= 22.31 Transcript Type= protein_coding
chr6	159778498	159789749	159778498	159789749	-	ENST00000321394.11@TCP1	ENST00000321394.11	protein_coding	159789405,159788058,159787743,159785900,159785386,159784666,159783941,159780935,159780443,159779895,159779627,159778498	159789749,159788143,159787871,159785997,159785496,159784847,159784067,159781110,159780566,159780087,159779790,159779261	Gene ID= ENSG00000120438.11 TPM= 38.24 Transcript Type= protein_coding
chr6	159778987	159789703	159778987	159789703	-	ENST00000392168.6@TCP1	ENST00000392168.6	protein_coding	159789405,159787743,159785900,159785386,159784666,159783941,159780935,159780443,159779895,159779627,159778987	159789703,159787871,159785997,159785496,159784847,159784067,159781110,159780566,159780087,159779790,159779261	Gene ID= ENSG00000120438.11 TPM= 5.31 Transcript Type= protein_coding
chr6	159789882	159798426	159789882	159798426	+	transcript4933.chr6.nnic@MRPL18	transcript4933.chr6.nnic	protein_coding	159789882,159790940,159797287,159798052	159790060,159791126,159797369,159798426	Gene ID= ENSG00000112110.9 TPM= 2.39 Transcript Type= NA
chr6	159789818	159798436	159789818	159798436	+	transcript4934.chr6.nnic@MRPL18	transcript4934.chr6.nnic	protein_coding	159789818,159790940,159797287,159798052	159790060,159791126,159797518,159798436	Gene ID= ENSG00000112110.9 TPM= 14.07 Transcript Type= NA
chr6	159790441	159798426	159790441	159798426	+	transcript4936.chr6.nnic@MRPL18	transcript4936.chr6.nnic	protein_coding	159790441,159790940,159797287,159798052	159790639,159791126,159797369,159798426	Gene ID= ENSG00000112110.9 TPM= 2.39 Transcript Type= NA
chr6	159790466	159798436	159790466	159798436	+	ENST00000367034.4@MRPL18	ENST00000367034.4	protein_coding	159790466,159790940,159797287,159798052	159790639,159791126,159797518,159798436	Gene ID= ENSG00000112110.9 TPM= 71.43 Transcript Type= protein_coding
chr6	160093082	160096212	160093082	160096212	+	ENST00000569097.1@AL353625.1	ENST00000569097.1	transcribed_processed_pseudogene	160093082	160096212	Gene ID= ENSG00000213073.4 TPM= 1.06 Transcript Type= processed_transcript
chr6	161347420	162727771	161347420	162727771	-	ENST00000366898.5@PRKN	ENST00000366898.5	protein_coding	162727662,162443310,162262525,162201131,162054091,161973302,161785772,161569355,161548854,161386794,161360088,161347420	162727771,162443473,162262765,162201252,162054174,161973417,161785908,161569416,161549003,161386877,161360205,161350211	Gene ID= ENSG00000185345.18 TPM= 21.24 Transcript Type= protein_coding
chr6	163209239	163315308	163209239	163315308	+	transcript4954.chr6.nnic@PACRG	transcript4954.chr6.nnic	protein_coding	163209239,163312779,163314827	163209389,163312895,163315308	Gene ID= ENSG00000112530.11 TPM= 5.31 Transcript Type= NA
chr6	163209264	163211016	163209264	163211016	+	transcript4956.chr6.nnic@PACRG	transcript4956.chr6.nnic	protein_coding	163209264,163209859	163209389,163211016	Gene ID= ENSG00000112530.11 TPM= 2.12 Transcript Type= NA
chr6	163414643	163578596	163414643	163578596	+	ENST00000361752.7@QKI	ENST00000361752.7	protein_coding	163414643,163455279,163478780,163534982,163561982,163563420,163566721,163570694	163415335,163455421,163478896,163535125,163562069,163563719,163566795,163578596	Gene ID= ENSG00000112531.16 TPM= 8.16 Transcript Type= protein_coding
chr6	163414000	163573800	163414000	163573800	+	ENST00000361758.8@QKI	ENST00000361758.8	protein_coding	163414000,163455279,163478780,163534982,163561982,163563420,163565946,163570694	163415335,163455421,163478896,163535125,163562069,163563719,163566795,163573800	Gene ID= ENSG00000112531.16 TPM= 158.06 Transcript Type= nonsense_mediated_decay
chr6	163414187	163570145	163414187	163570145	+	transcript5006.chr6.nic@QKI	transcript5006.chr6.nic	protein_coding	163414187,163455279,163478780,163534982,163561982,163563444,163565946	163415335,163455421,163478896,163535125,163562069,163563719,163570145	Gene ID= ENSG00000112531.16 TPM= 30.42 Transcript Type= NA
chr6	163414643	163570145	163414643	163570145	+	ENST00000453779.6@QKI	ENST00000453779.6	protein_coding	163414643,163455279,163478780,163534982,163561982,163563420,163565946	163415335,163455421,163478896,163535125,163562069,163563719,163570145	Gene ID= ENSG00000112531.16 TPM= 43.57 Transcript Type= protein_coding
chr6	163414643	163570145	163414643	163570145	+	ENST00000275262.11@QKI	ENST00000275262.11	protein_coding	163414643,163455279,163478780,163534982,163561982,163563420,163564667	163415335,163455421,163478896,163535125,163562069,163563719,163570145	Gene ID= ENSG00000112531.16 TPM= 9.58 Transcript Type= protein_coding
chr6	163415425	163417068	163415425	163417068	+	transcript5022.chr6.nnic@NA	transcript5022.chr6.nnic	NA	163415425	163417068	Gene ID= novel_gene_chr6_5023 TPM= 2.12 Transcript Type= NA
chr6	163420192	163424921	163420192	163424921	-	transcript5038.chr6.nnic@NA	transcript5038.chr6.nnic	NA	163420192	163424921	Gene ID= novel_gene_chr6_5039 TPM= 3.19 Transcript Type= NA
chr6	163424643	163427235	163424643	163427235	-	transcript5034.chr6.nnic@NA	transcript5034.chr6.nnic	NA	163424643	163427235	Gene ID= novel_gene_chr6_5035 TPM= 18.06 Transcript Type= NA
chr6	163427245	163429344	163427245	163429344	-	transcript5040.chr6.nnic@NA	transcript5040.chr6.nnic	NA	163427245	163429344	Gene ID= novel_gene_chr6_5041 TPM= 23.37 Transcript Type= NA
chr6	163477022	163478056	163477022	163478056	-	transcript5036.chr6.nnic@NA	transcript5036.chr6.nnic	NA	163477022	163478056	Gene ID= novel_gene_chr6_5037 TPM= 3.19 Transcript Type= NA
chr6	163557549	163557829	163557549	163557829	+	transcript5024.chr6.nnic@NA	transcript5024.chr6.nnic	NA	163557549	163557829	Gene ID= novel_gene_chr6_5025 TPM= 2.12 Transcript Type= NA
chr6	164108349	164110264	164108349	164110264	+	transcript5042.chr6.nnic@NA	transcript5042.chr6.nnic	NA	164108349	164110264	Gene ID= novel_gene_chr6_5043 TPM= 2.12 Transcript Type= NA
chr6	165633796	165636480	165633796	165636480	-	transcript5057.chr6.nnic@NA	transcript5057.chr6.nnic	NA	165633796	165636480	Gene ID= novel_gene_chr6_5058 TPM= 3.19 Transcript Type= NA
chr6	166319728	166342589	166319728	166342589	-	transcript5059.chr6.nnic@SFT2D1	transcript5059.chr6.nnic	protein_coding	166342419,166341729,166330161,166329507,166328276,166326132,166324537,166322857,166319728	166342589,166341819,166330247,166329589,166328357,166326167,166324595,166322886,166320256	Gene ID= ENSG00000198818.9 TPM= 2.12 Transcript Type= NA
chr6	166319728	166342591	166319728	166342591	-	ENST00000361731.3@SFT2D1	ENST00000361731.3	protein_coding	166342419,166330161,166329507,166328276,166326132,166324537,166322857,166319728	166342591,166330247,166329589,166328357,166326167,166324595,166322886,166320256	Gene ID= ENSG00000198818.9 TPM= 58.42 Transcript Type= protein_coding
chr6	166364919	166383013	166364919	166383013	-	ENST00000621685.4@MPC1	ENST00000621685.4	protein_coding	166382806,166366969,166366795,166365974,166364919	166383013,166367187,166366891,166366106,166365453	Gene ID= ENSG00000060762.18 TPM= 6.29 Transcript Type= protein_coding
chr6	166364919	166383013	166364919	166383013	-	ENST00000341756.10@MPC1	ENST00000341756.10	protein_coding	166382806,166366795,166365974,166364919	166383013,166366894,166366106,166365453	Gene ID= ENSG00000060762.18 TPM= 706.78 Transcript Type= protein_coding
chr6	166409364	166627243	166409364	166627243	-	ENST00000265678.8@RPS6KA2	ENST00000265678.8	protein_coding	166626921,166538668,166531232,166510277,166508203,166504506,166500887,166498508,166490671,166488833,166469841,166459449,166451103,166448724,166432401,166430453,166423256,166419882,166418225,166413794,166409364	166627243,166538784,166531313,166510357,166508282,166504612,166500924,166498650,166490741,166488921,166469905,166459551,166451233,166448849,166432490,166430611,166423417,166419958,166418342,166413931,166412887	Gene ID= ENSG00000071242.11 TPM= 132.77 Transcript Type= protein_coding
chr6	166467930	166468871	166467930	166468871	+	transcript5092.chr6.nnic@NA	transcript5092.chr6.nnic	NA	166467930	166468871	Gene ID= novel_gene_chr6_5093 TPM= 2.12 Transcript Type= NA
chr6	166582184	166585642	166582184	166585642	+	transcript5094.chr6.nnic@NA	transcript5094.chr6.nnic	NA	166582184	166585642	Gene ID= novel_gene_chr6_5095 TPM= 2.12 Transcript Type= NA
chr6	166633937	166639909	166633937	166639909	+	transcript5100.chr6.nnic@NA	transcript5100.chr6.nnic	NA	166633937,166639615	166634014,166639909	Gene ID= novel_gene_chr6_5101 TPM= 3.19 Transcript Type= NA
chr6	166929504	166956702	166929504	166956702	-	ENST00000508775.5@RNASET2	ENST00000508775.5	protein_coding	166956097,166952488,166948570,166946682,166943019,166938895,166934091,166931044,166929504	166956702,166952548,166948625,166946739,166943089,166939008,166934136,166931118,166929791	Gene ID= ENSG00000026297.15 TPM= 17.35 Transcript Type= protein_coding
chr6	166929516	166956609	166929516	166956609	-	transcript5104.chr6.nnic@RNASET2	transcript5104.chr6.nnic	protein_coding	166956097,166952488,166952084,166946682,166943019,166938895,166934091,166931044,166929516	166956609,166952548,166952157,166946739,166943089,166939008,166934136,166931118,166929791	Gene ID= ENSG00000026297.15 TPM= 7.79 Transcript Type= NA
chr6	166929516	166956635	166929516	166956635	-	transcript5107.chr6.nnic@RNASET2	transcript5107.chr6.nnic	protein_coding	166956097,166946682,166943019,166938895,166934091,166931044,166929516	166956635,166946739,166943089,166939008,166934136,166931118,166929791	Gene ID= ENSG00000026297.15 TPM= 3.54 Transcript Type= NA
chr6	166999182	167052713	166999182	167052713	+	ENST00000366847.8@FGFR1OP	ENST00000366847.8	protein_coding	166999182,167000060,167003193,167003723,167004264,167010813,167013508,167022409,167024782,167026547,167032603,167033875,167039904	166999514,167000113,167003247,167003811,167004401,167010893,167013567,167022635,167024894,167026615,167032642,167033971,167052713	Gene ID= ENSG00000213066.11 TPM= 3.19 Transcript Type= protein_coding
chr6	166999408	167040317	166999408	167040317	+	ENST00000349556.4@FGFR1OP	ENST00000349556.4	protein_coding	166999408,167000060,167003193,167003723,167004264,167010813,167022409,167024782,167026547,167032603,167033875,167039904	166999514,167000113,167003247,167003811,167004401,167010893,167022635,167024894,167026615,167032642,167033971,167040317	Gene ID= ENSG00000213066.11 TPM= 2.12 Transcript Type= protein_coding
chr6	167826853	167872291	167826853	167872291	+	transcript5126.chr6.nic@AFDN	transcript5126.chr6.nic	protein_coding	167826853,167864551,167870383,167872214	167827237,167864746,167870498,167872291	Gene ID= ENSG00000130396.20 TPM= 3.19 Transcript Type= NA
chr6	167965149	167967347	167965149	167967347	-	transcript5131.chr6.nnic@NA	transcript5131.chr6.nnic	NA	167965149	167967347	Gene ID= novel_gene_chr6_5132 TPM= 2.12 Transcript Type= NA
chr6	168306904	168319722	168306904	168319722	-	ENST00000366795.3@DACT2	ENST00000366795.3	protein_coding	168319388,168311152,168310168,168306904	168319722,168311284,168310446,168309098	Gene ID= ENSG00000164488.11 TPM= 1.06 Transcript Type= protein_coding
chr6	168441151	168667994	168441151	168667994	+	ENST00000354536.9@SMOC2	ENST00000354536.9	protein_coding	168441151,168509915,168526346,168527628,168543625,168547086,168549129,168598818,168608157,168650681,168652954,168664074,168666421	168441454,168510086,168526452,168527727,168543672,168547169,168549203,168599004,168608239,168650783,168653228,168664111,168667994	Gene ID= ENSG00000112562.18 TPM= 7.97 Transcript Type= protein_coding
chr6	168441151	168667994	168441151	168667994	+	ENST00000356284.6@SMOC2	ENST00000356284.6	protein_coding	168441151,168509915,168526346,168527628,168543625,168547119,168549129,168598818,168608157,168650681,168652954,168664074,168666421	168441454,168510086,168526452,168527727,168543672,168547169,168549203,168599004,168608239,168650783,168653228,168664111,168667994	Gene ID= ENSG00000112562.18 TPM= 30.27 Transcript Type= protein_coding
chr6	169244165	169253845	169244165	169253845	-	transcript5145.chr6.nic@THBS2	transcript5145.chr6.nic	protein_coding	169253724,169250733,169248417,169244165	169253845,169250806,169248973,169246281	Gene ID= ENSG00000186340.14 TPM= 5.31 Transcript Type= NA
chr6	169373676	169388371	169373676	169388371	-	transcript5148.chr6.nnic@LINC02519	transcript5148.chr6.nnic	lincRNA	169388201,169374015,169373676	169388371,169375777,169373952	Gene ID= ENSG00000226194.5 TPM= 2.12 Transcript Type= NA
chr6	169672322	169702048	169672322	169702048	-	ENST00000474018.1@WDR27	ENST00000474018.1	protein_coding	169701551,169689127,169688817,169672322	169702048,169689308,169689012,169672396	Gene ID= ENSG00000184465.15 TPM= 1.06 Transcript Type= protein_coding
chr6	169702190	169704856	169702190	169704856	+	ENST00000332290.3@C6orf120	ENST00000332290.3	protein_coding	169702190	169704856	Gene ID= ENSG00000185127.6 TPM= 12.75 Transcript Type= protein_coding
chr6	169707028	169724021	169707028	169724021	-	transcript5156.chr6.nnic@PHF10	transcript5156.chr6.nnic	protein_coding	169723845,169718788,169717823,169715955,169715708,169714733,169712386,169707028	169724021,169718918,169717906,169716088,169715857,169714842,169712539,169710391	Gene ID= ENSG00000130024.14 TPM= 7.44 Transcript Type= NA
chr6	169707028	169724005	169707028	169724005	-	ENST00000612128.1@PHF10	ENST00000612128.1	protein_coding	169723845,169721005,169718788,169717823,169715955,169715708,169714733,169712386,169707028	169724005,169721111,169718918,169717906,169716088,169715857,169714842,169712539,169710391	Gene ID= ENSG00000130024.14 TPM= 32.93 Transcript Type= protein_coding
chr6	169751625	169781584	169751625	169781584	+	ENST00000366773.7@ERMARD	ENST00000366773.7	protein_coding	169751625,169753864,169755283,169756338,169756719,169758968,169759838,169760642,169762429,169766638,169768103,169769540,169773319,169775270,169775940,169776455,169779182,169781330	169751663,169754032,169755422,169756439,169756808,169759065,169759974,169760756,169762531,169766667,169768171,169769713,169773402,169775346,169776065,169776673,169779295,169781584	Gene ID= ENSG00000130023.15 TPM= 4.25 Transcript Type= protein_coding
chr6	169764244	169767817	169764244	169767817	-	transcript5173.chr6.nnic@NA	transcript5173.chr6.nnic	NA	169766017,169764244	169767817,169765871	Gene ID= novel_gene_chr6_5174 TPM= 2.12 Transcript Type= NA
chr6	170155770	170165742	170155770	170165742	-	transcript5179.chr6.nnic@NA	transcript5179.chr6.nnic	NA	170165604,170160125,170155770	170165742,170160344,170156045	Gene ID= novel_gene_chr6_5180 TPM= 3.19 Transcript Type= NA
chr6	170306767	170405078	170306767	170405078	+	transcript5189.chr6.nnic@FAM120B	transcript5189.chr6.nnic	protein_coding	170306767,170317370,170323079,170330449,170358226,170388287,170391013,170395487,170404550,170404763	170306842,170319124,170323259,170330550,170358318,170388493,170391121,170395579,170404601,170405078	Gene ID= ENSG00000112584.13 TPM= 2.12 Transcript Type= NA
chr6	170394931	170405078	170394931	170405078	+	transcript5195.chr6.nic@FAM120B	transcript5195.chr6.nic	protein_coding	170394931,170404550,170404763	170395579,170404601,170405078	Gene ID= ENSG00000112584.13 TPM= 7.44 Transcript Type= NA
chr6	170306756	170407065	170306756	170407065	+	ENST00000476287.3@FAM120B	ENST00000476287.3	protein_coding	170306756,170317370,170323079,170330449,170348151,170358226,170388287,170391013,170395487,170404550,170404763	170306842,170319124,170323259,170330550,170348323,170358318,170388493,170391121,170395579,170404601,170407065	Gene ID= ENSG00000112584.13 TPM= 6.37 Transcript Type= protein_coding
chr6	170304551	170306715	170304551	170306715	-	transcript5198.chr6.nnic@NA	transcript5198.chr6.nnic	NA	170304551	170306715	Gene ID= novel_gene_chr6_5199 TPM= 4.25 Transcript Type= NA
chr6	170369691	170371151	170369691	170371151	-	transcript5200.chr6.nnic@NA	transcript5200.chr6.nnic	NA	170369691	170371151	Gene ID= novel_gene_chr6_5201 TPM= 7.44 Transcript Type= NA
chr6	170401345	170405077	170401345	170405077	+	transcript5196.chr6.nnic@NA	transcript5196.chr6.nnic	NA	170401345	170405077	Gene ID= novel_gene_chr6_5197 TPM= 2.12 Transcript Type= NA
chr6	170535117	170553341	170535117	170553341	-	ENST00000262193.6@PSMB1	ENST00000262193.6	protein_coding	170553130,170549006,170546103,170543601,170537234,170535117	170553341,170549113,170546184,170543730,170537340,170535405	Gene ID= ENSG00000008018.8 TPM= 278.29 Transcript Type= protein_coding
chr6	170554333	170572869	170554333	170572869	+	ENST00000392092.6@TBP	ENST00000392092.6	protein_coding	170554333,170556882,170561791,170564545,170566918,170569612,170571410,170572186	170554463,170557083,170562233,170564632,170567009,170569779,170571504,170572869	Gene ID= ENSG00000112592.13 TPM= 6.37 Transcript Type= protein_coding
chr6	170554333	170572869	170554333	170572869	+	ENST00000540980.5@TBP	ENST00000540980.5	protein_coding	170554333,170561791,170564545,170566918,170569612,170571410,170572186	170554463,170562233,170564632,170567009,170569779,170571504,170572869	Gene ID= ENSG00000112592.13 TPM= 1.06 Transcript Type= protein_coding
chr6	170577129	170584648	170577129	170584648	-	transcript5215.chr6.nnic@PDCD2	transcript5215.chr6.nnic	protein_coding	170584497,170584299,170583505,170583057,170580002,170578857,170577129	170584648,170584410,170583747,170583188,170580105,170578970,170577717	Gene ID= ENSG00000071994.10 TPM= 5.31 Transcript Type= NA
chr6	170581748	170584692	170581748	170584692	-	ENST00000614056.4@PDCD2	ENST00000614056.4	protein_coding	170584299,170583505,170583057,170581748	170584692,170583747,170583188,170582265	Gene ID= ENSG00000071994.10 TPM= 2.12 Transcript Type= protein_coding
chr6	170581792	170584654	170581792	170584654	-	ENST00000443345.2@PDCD2	ENST00000443345.2	protein_coding	170584492,170584299,170583505,170581792	170584654,170584392,170583747,170583188	Gene ID= ENSG00000071994.10 TPM= 1.06 Transcript Type= protein_coding
chr6	170578482	170582106	170578482	170582106	-	transcript5229.chr6.nic@PDCD2	transcript5229.chr6.nic	protein_coding	170580002,170578857,170578482	170582106,170578970,170578656	Gene ID= ENSG00000071994.10 TPM= 2.12 Transcript Type= NA
chr6	170578482	170584612	170578482	170584612	-	ENST00000542896.5@PDCD2	ENST00000542896.5	protein_coding	170584299,170583505,170583057,170580002,170578857,170578482	170584612,170583747,170583188,170580105,170578970,170578656	Gene ID= ENSG00000071994.10 TPM= 3.19 Transcript Type= protein_coding
chr6	170581745	170584615	170581745	170584615	-	ENST00000537445.5@PDCD2	ENST00000537445.5	protein_coding	170584492,170584299,170583505,170583057,170581745	170584615,170584392,170583747,170583188,170582265	Gene ID= ENSG00000071994.10 TPM= 1.06 Transcript Type= protein_coding
chr7	192182	249582	192182	249582	+	transcript6.chr7.nic@FAM20C	transcript6.chr7.nic	protein_coding	192182,195554,208898,246415,248315	193804,195732,208976,246507,249582	Gene ID= ENSG00000177706.8 TPM= 3.19 Transcript Type= NA
chr7	192969	260745	192969	260745	+	ENST00000313766.5@FAM20C	ENST00000313766.5	protein_coding	192969,195554,208898,246415,248315,255849,256654,257005,258646,259731	193804,195732,208976,246507,248430,256029,256763,257086,258705,260745	Gene ID= ENSG00000177706.8 TPM= 46.74 Transcript Type= protein_coding
chr7	498335	520217	498335	520217	-	transcript12.chr7.nic@PDGFA	transcript12.chr7.nic	protein_coding	519960,518939,517394,512351,510809,501116,498335	520217,519068,517490,512455,510996,501242,498574	Gene ID= ENSG00000197461.13 TPM= 2.12 Transcript Type= NA
chr7	522544	525233	522544	525233	+	transcript24.chr7.nnic@HRAT92	transcript24.chr7.nnic	lincRNA	522544,524080,524365,524854	522703,524280,524602,525233	Gene ID= ENSG00000223855.1 TPM= 3.72 Transcript Type= NA
chr7	522575	525233	522575	525233	+	transcript25.chr7.nnic@HRAT92	transcript25.chr7.nnic	lincRNA	522575,523195,524080,524365	522703,523316,524280,525233	Gene ID= ENSG00000223855.1 TPM= 4.6 Transcript Type= NA
chr7	522544	525233	522544	525233	+	transcript28.chr7.nnic@HRAT92	transcript28.chr7.nnic	lincRNA	522544,524080,524365	522703,524280,525233	Gene ID= ENSG00000223855.1 TPM= 16.28 Transcript Type= NA
chr7	522544	525232	522544	525232	+	transcript29.chr7.nnic@HRAT92	transcript29.chr7.nnic	lincRNA	522544,524080,524854	522703,524280,525232	Gene ID= ENSG00000223855.1 TPM= 36.64 Transcript Type= NA
chr7	522544	524413	522544	524413	+	transcript30.chr7.nnic@HRAT92	transcript30.chr7.nnic	lincRNA	522544,524080	522703,524413	Gene ID= ENSG00000223855.1 TPM= 4.25 Transcript Type= NA
chr7	522544	525233	522544	525233	+	transcript31.chr7.nnic@HRAT92	transcript31.chr7.nnic	lincRNA	522544,524080	522703,525233	Gene ID= ENSG00000223855.1 TPM= 24.78 Transcript Type= NA
chr7	522575	525230	522575	525230	+	transcript33.chr7.nnic@NA	transcript33.chr7.nnic	NA	522575	525230	Gene ID= novel_gene_chr7_34 TPM= 2.12 Transcript Type= NA
chr7	549197	727341	549197	727341	-	ENST00000537384.5@PRKAR1B	ENST00000537384.5	protein_coding	727210,711329,680556,677229,607391,606193,596146,584508,579256,551389,549197	727341,711527,680726,677320,607452,606239,596304,584568,579377,551470,550602	Gene ID= ENSG00000188191.14 TPM= 13.28 Transcript Type= protein_coding
chr7	549198	713207	549198	713207	-	ENST00000406797.5@PRKAR1B	ENST00000406797.5	protein_coding	713055,711329,680556,677229,607391,606193,596146,584508,579256,551389,549198	713207,711527,680726,677320,607452,606239,596304,584568,579377,551470,550602	Gene ID= ENSG00000188191.14 TPM= 7.97 Transcript Type= protein_coding
chr7	549198	650748	549198	650748	-	transcript55.chr7.nnic@PRKAR1B	transcript55.chr7.nnic	protein_coding	650614,607391,606193,596146,584508,579256,551389,549198	650748,607452,606239,596304,584568,579377,551470,550602	Gene ID= ENSG00000188191.14 TPM= 13.81 Transcript Type= NA
chr7	578683	650748	578683	650748	-	transcript57.chr7.nnic@PRKAR1B	transcript57.chr7.nnic	protein_coding	650614,607391,606193,596146,584508,579256,578683	650748,607452,606239,596304,584568,579377,578853	Gene ID= ENSG00000188191.14 TPM= 3.19 Transcript Type= NA
chr7	716618	727279	716618	727279	-	transcript62.chr7.nnic@PRKAR1B	transcript62.chr7.nnic	protein_coding	727210,716618	727279,716846	Gene ID= ENSG00000188191.14 TPM= 3.19 Transcript Type= NA
chr7	726679	780904	726679	780904	+	transcript39.chr7.nic@DNAAF5	transcript39.chr7.nic	protein_coding	726679,729663,740819,741347,754589,756782,761753,763806,770471,774048,775006,779953	727315,729847,740943,741465,754821,756994,761896,763974,770618,774198,775162,780904	Gene ID= ENSG00000164818.15 TPM= 3.19 Transcript Type= NA
chr7	726679	786471	726679	786471	+	transcript40.chr7.nnic@DNAAF5	transcript40.chr7.nnic	protein_coding	726679,729663,740819,741347,754589,756782,761753,763806,770471,774048,775006,785517	727315,729847,740943,741465,754821,756994,761896,763974,770618,774198,775162,786471	Gene ID= ENSG00000164818.15 TPM= 5.31 Transcript Type= NA
chr7	726701	786475	726701	786475	+	ENST00000297440.10@DNAAF5	ENST00000297440.10	protein_coding	726701,729663,740819,741347,754589,756782,761753,763806,770471,774048,775006,779953,785517	727315,729847,740943,741465,754821,756994,761896,763974,770618,774198,775162,780144,786475	Gene ID= ENSG00000164818.15 TPM= 47.8 Transcript Type= protein_coding
chr7	816620	874899	816620	874899	+	transcript67.chr7.nic@SUN1	transcript67.chr7.nic	protein_coding	816620,832505,838798,841946,843206,843341,848418,849520,849923,851384,851950,852609,852810,853409,854920,856358,857828,860128,861380,865952,869349,872470,873215	816673,832601,838986,842130,843232,843520,848615,849603,850033,851482,852043,852667,852952,853618,855006,856401,857957,860382,861464,866067,869516,872562,874899	Gene ID= ENSG00000164828.17 TPM= 6.32 Transcript Type= NA
chr7	816620	874899	816620	874899	+	transcript71.chr7.nic@SUN1	transcript71.chr7.nic	protein_coding	816620,832505,838798,841946,843206,843341,848418,849520,851384,851950,852609,852810,853409,854920,856358,857828,860128,861380,865952,869349,872470,873215	816673,832601,838986,842130,843232,843520,848615,849603,851482,852043,852667,852952,853618,855006,856401,857957,860382,861464,866067,869516,872562,874899	Gene ID= ENSG00000164828.17 TPM= 39.25 Transcript Type= NA
chr7	816620	874899	816620	874899	+	transcript82.chr7.nnic@SUN1	transcript82.chr7.nnic	protein_coding	816620,832505,838798,841946,843206,843341,848418,849520,851950,852609,852810,853409,854920,856358,857828,860128,861380,865952,869349,872470,873215	816673,832601,838986,842130,843232,843520,848615,849603,852043,852667,852952,853618,855006,856401,857957,860382,861464,866067,869516,872562,874899	Gene ID= ENSG00000164828.17 TPM= 10.57 Transcript Type= NA
chr7	816620	874899	816620	874899	+	transcript90.chr7.nic@SUN1	transcript90.chr7.nic	protein_coding	816620,832505,838798,841946,843206,843341,849923,851384,851950,852609,852810,853409,854920,856358,857828,860128,861380,865952,869349,872470,873215	816673,832601,838986,842130,843232,843520,850033,851482,852043,852667,852952,853618,855006,856401,857957,860382,861464,866067,869516,872562,874899	Gene ID= ENSG00000164828.17 TPM= 5.26 Transcript Type= NA
chr7	816635	874899	816635	874899	+	transcript93.chr7.nic@SUN1	transcript93.chr7.nic	protein_coding	816635,838798,841946,843206,843341,848418,849520,851384,851950,852609,852810,853409,854920,856358,857828,860128,861380,865952,869349,872470,873215	816673,838986,842130,843232,843520,848615,849603,851482,852043,852667,852952,853618,855006,856401,857957,860382,861464,866067,869516,872562,874899	Gene ID= ENSG00000164828.17 TPM= 12.16 Transcript Type= NA
chr7	816620	839180	816620	839180	+	transcript108.chr7.nic@SUN1	transcript108.chr7.nic	protein_coding	816620,832505,838798	816673,832601,839180	Gene ID= ENSG00000164828.17 TPM= 8.5 Transcript Type= NA
chr7	832501	874900	832501	874900	+	ENST00000405266.5@SUN1	ENST00000405266.5	protein_coding	832501,838798,841946,843206,843341,849923,851384,851950,852609,852810,853409,854920,856358,857828,860128,861380,865952,869349,872470,873215	832601,838986,842130,843232,843520,850033,851482,852043,852667,852952,853618,855006,856401,857957,860382,861464,866067,869516,872562,874900	Gene ID= ENSG00000164828.17 TPM= 5.26 Transcript Type= protein_coding
chr7	832501	874902	832501	874902	+	ENST00000401592.5@SUN1	ENST00000401592.5	protein_coding	832501,838798,841946,843206,843341,851384,851950,852609,852810,853409,854920,856358,857828,860128,861380,865952,869349,872470,873215	832601,838986,842130,843232,843520,851482,852043,852667,852952,853618,855006,856401,857957,860382,861464,866067,869516,872562,874902	Gene ID= ENSG00000164828.17 TPM= 8.31 Transcript Type= protein_coding
chr7	843370	874899	843370	874899	+	ENST00000429178.5@SUN1	ENST00000429178.5	protein_coding	843370,848418,849520,851384,851950,852609,852810,853409,854920,856358,857828,860128,861380,865952,869349,872470,873215	843520,848615,849603,851482,852043,852667,852952,853618,855006,856401,857957,860382,861464,866067,869516,872562,874899	Gene ID= ENSG00000164828.17 TPM= 7.38 Transcript Type= protein_coding
chr7	876552	896434	876552	896434	+	ENST00000265857.7@GET4	ENST00000265857.7	protein_coding	876552,886056,886569,887370,890928,892278,893740,893899,895334	876800,886134,886650,887519,891066,892418,893815,893971,896434	Gene ID= ENSG00000239857.6 TPM= 95.06 Transcript Type= protein_coding
chr7	876561	896434	876561	896434	+	transcript113.chr7.nic@GET4	transcript113.chr7.nic	protein_coding	876561,886056,886569,887370,890928,892278,893740,895334	876800,886134,886650,887519,891066,892418,893971,896434	Gene ID= ENSG00000239857.6 TPM= 12.21 Transcript Type= NA
chr7	883543	896436	883543	896436	+	ENST00000407192.5@GET4	ENST00000407192.5	protein_coding	883543,886569,887370,890928,892278,893740,893899,895334	886134,886650,887519,891066,892418,893815,893971,896436	Gene ID= ENSG00000239857.6 TPM= 9.56 Transcript Type= protein_coding
chr7	897903	954697	897903	954697	-	ENST00000265846.9@ADAP1	ENST00000265846.9	protein_coding	954396,935375,926553,919968,905060,904126,900533,900102,899419,899033,897903	954697,935505,926644,920050,905172,904272,900616,900164,899490,899261,898949	Gene ID= ENSG00000105963.13 TPM= 24.43 Transcript Type= protein_coding
chr7	966075	975599	966075	975599	-	ENST00000344111.3@COX19	ENST00000344111.3	protein_coding	975428,973181,966075	975599,973292,969456	Gene ID= ENSG00000240230.5 TPM= 5.31 Transcript Type= protein_coding
chr7	997006	1028369	997006	1028369	-	transcript134.chr7.nnic@C7orf50	transcript134.chr7.nnic	protein_coding	1028258,1009950,1000470,997646,997006	1028369,1010143,1000551,997804,997433	Gene ID= ENSG00000146540.14 TPM= 4.6 Transcript Type= NA
chr7	997006	1138240	997006	1138240	-	ENST00000397098.7@C7orf50	ENST00000397098.7	protein_coding	1137315,1127257,1009950,1000470,997006	1138240,1127386,1010143,1000551,997804	Gene ID= ENSG00000146540.14 TPM= 1.68 Transcript Type= protein_coding
chr7	997016	1028339	997016	1028339	-	ENST00000412051.5@C7orf50	ENST00000412051.5	protein_coding	1028258,1009950,1000470,997016	1028339,1010143,1000551,997804	Gene ID= ENSG00000146540.14 TPM= 131.79 Transcript Type= protein_coding
chr7	996986	1138257	996986	1138257	-	ENST00000357429.10@C7orf50	ENST00000357429.10	protein_coding	1138189,1127257,1009950,1000470,996986	1138257,1127386,1010143,1000551,997804	Gene ID= ENSG00000146540.14 TPM= 11.33 Transcript Type= protein_coding
chr7	1024502	1028352	1024502	1028352	-	ENST00000465681.1@C7orf50	ENST00000465681.1	protein_coding	1028258,1024502	1028352,1027027	Gene ID= ENSG00000146540.14 TPM= 6.37 Transcript Type= retained_intron
chr7	1017491	1019209	1017491	1019209	+	transcript157.chr7.nnic@NA	transcript157.chr7.nnic	NA	1017491	1019209	Gene ID= novel_gene_chr7_158 TPM= 7.44 Transcript Type= NA
chr7	1055370	1059253	1055370	1059253	+	transcript144.chr7.nnic@GPR146	transcript144.chr7.nnic	protein_coding	1055370,1056104,1057492	1055483,1056248,1059253	Gene ID= ENSG00000164849.9 TPM= 4.25 Transcript Type= NA
chr7	1088087	1093810	1088087	1093810	+	ENST00000397088.3@GPER1	ENST00000397088.3	protein_coding	1088087,1091407	1088321,1093810	Gene ID= ENSG00000164850.14 TPM= 13.81 Transcript Type= protein_coding
chr7	1152907	1160178	1152907	1160178	-	ENST00000316495.7@ZFAND2A	ENST00000316495.7	protein_coding	1159964,1158158,1157656,1155453,1152907	1160178,1158257,1157750,1155584,1153224	Gene ID= ENSG00000178381.11 TPM= 7.44 Transcript Type= protein_coding
chr7	1160418	1163114	1160418	1163114	+	transcript167.chr7.nnic@NA	transcript167.chr7.nnic	NA	1160418	1163114	Gene ID= novel_gene_chr7_168 TPM= 6.37 Transcript Type= NA
chr7	1434366	1459502	1434366	1459502	-	ENST00000297508.7@MICALL2	ENST00000297508.7	protein_coding	1459184,1450240,1448620,1447575,1446713,1444652,1442192,1440591,1439925,1438840,1438289,1438097,1437890,1437535,1436742,1435101,1434366	1459502,1450288,1448761,1447765,1446828,1445428,1442484,1440684,1440085,1438995,1438353,1438220,1437980,1437608,1436856,1435147,1434672	Gene ID= ENSG00000164877.18 TPM= 6.37 Transcript Type= protein_coding
chr7	1486270	1489345	1486270	1489345	-	transcript186.chr7.nic@INTS1	transcript186.chr7.nic	protein_coding	1487320,1486922,1486270	1489345,1487101,1486774	Gene ID= ENSG00000164880.15 TPM= 3.19 Transcript Type= NA
chr7	1470277	1504367	1470277	1504367	-	ENST00000404767.7@INTS1	ENST00000404767.7	protein_coding	1504323,1503903,1502901,1500170,1499884,1499473,1499255,1498975,1498707,1498412,1497138,1496156,1495433,1494816,1493754,1493010,1489591,1489344,1487760,1487320,1486922,1486625,1485290,1485098,1484003,1483742,1482546,1481342,1480835,1480317,1479430,1478726,1478366,1477753,1477550,1476794,1476570,1476229,1475948,1474705,1474168,1473566,1473072,1472273,1471571,1471133,1470846,1470277	1504367,1504001,1503191,1500366,1500021,1499632,1499360,1499161,1498852,1498553,1497314,1496264,1495553,1494893,1493911,1493106,1489682,1489404,1487957,1487449,1487101,1486774,1485469,1485202,1484170,1483853,1482707,1481488,1480933,1480441,1479684,1478885,1478506,1477936,1477673,1476918,1476657,1476455,1476071,1474838,1474360,1473693,1473184,1472386,1471641,1471224,1470955,1470692	Gene ID= ENSG00000164880.15 TPM= 95.59 Transcript Type= protein_coding
chr7	1540838	1543041	1540838	1543041	+	transcript194.chr7.nnic@MAFK	transcript194.chr7.nnic	protein_coding	1540838,1542299	1542168,1543041	Gene ID= ENSG00000198517.9 TPM= 3.19 Transcript Type= NA
chr7	1540838	1543043	1540838	1543043	+	transcript195.chr7.nic@MAFK	transcript195.chr7.nic	protein_coding	1540838,1542299	1541274,1543043	Gene ID= ENSG00000198517.9 TPM= 3.19 Transcript Type= NA
chr7	1530714	1543043	1530714	1543043	+	ENST00000343242.8@MAFK	ENST00000343242.8	protein_coding	1530714,1539149,1539941	1530898,1539228,1543043	Gene ID= ENSG00000198517.9 TPM= 404.68 Transcript Type= protein_coding
chr7	1537487	1542686	1537487	1542686	+	ENST00000403150.5@MAFK	ENST00000403150.5	protein_coding	1537487,1539149,1539941,1542299	1538457,1539228,1541274,1542686	Gene ID= ENSG00000198517.9 TPM= 12.75 Transcript Type= nonsense_mediated_decay
chr7	1532454	1533559	1532454	1533559	-	transcript202.chr7.nnic@NA	transcript202.chr7.nnic	NA	1532454	1533559	Gene ID= novel_gene_chr7_203 TPM= 3.19 Transcript Type= NA
chr7	1535087	1538014	1535087	1538014	-	transcript200.chr7.nnic@NA	transcript200.chr7.nnic	NA	1535087	1538014	Gene ID= novel_gene_chr7_201 TPM= 20.18 Transcript Type= NA
chr7	1567330	1569993	1567330	1569993	-	ENST00000288607.2@PSMG3	ENST00000288607.2	protein_coding	1569124,1567330	1569993,1567850	Gene ID= ENSG00000157778.8 TPM= 24.43 Transcript Type= protein_coding
chr7	1567351	1570045	1567351	1570045	-	ENST00000404674.7@PSMG3	ENST00000404674.7	protein_coding	1570009,1569124,1567351	1570045,1569360,1567850	Gene ID= ENSG00000157778.8 TPM= 4.25 Transcript Type= protein_coding
chr7	1570073	1589626	1570073	1589626	+	ENST00000437621.6@PSMG3-AS1	ENST00000437621.6	lincRNA	1570073,1574715,1575787,1584384	1570279,1574863,1575888,1589626	Gene ID= ENSG00000230487.7 TPM= 6.37 Transcript Type= lincRNA
chr7	1570135	1586545	1570135	1586545	+	ENST00000437964.5@PSMG3-AS1	ENST00000437964.5	lincRNA	1570135,1574715,1575787,1583162,1584384	1570279,1574863,1575888,1583269,1586545	Gene ID= ENSG00000230487.7 TPM= 2.12 Transcript Type= lincRNA
chr7	1666075	1747491	1666075	1747491	+	transcript211.chr7.nnic@ELFN1	transcript211.chr7.nnic	protein_coding	1666075,1709091,1744304	1666170,1709252,1747491	Gene ID= ENSG00000225968.7 TPM= 4.25 Transcript Type= NA
chr7	1696394	1699704	1696394	1699704	-	transcript213.chr7.nnic@NA	transcript213.chr7.nnic	NA	1696394	1699704	Gene ID= novel_gene_chr7_214 TPM= 6.37 Transcript Type= NA
chr7	1815794	2233243	1815794	2233243	-	ENST00000406869.5@MAD1L1	ENST00000406869.5	protein_coding	2232872,2230549,2229984,2225410,2222575,2219332,2217962,2216157,2215885,2213212,2149152,2069194,2014502,2002065,1980453,1957629,1936687,1898200,1815794	2233243,2230724,2230143,2225550,2222754,2219456,2218043,2216287,2215999,2213273,2149238,2069338,2014642,2002121,1980541,1957719,1936897,1898390,1816228	Gene ID= ENSG00000002822.15 TPM= 22.84 Transcript Type= protein_coding
chr7	1815794	2232974	1815794	2232974	-	ENST00000399654.6@MAD1L1	ENST00000399654.6	protein_coding	2232872,2230549,2229984,2225410,2222575,2219332,2217962,2216157,2215885,2213212,2149152,2069194,2014502,2002065,1980453,1957629,1936687,1898200,1815794	2232974,2230764,2230143,2225550,2222754,2219456,2218043,2216287,2215999,2213273,2149238,2069338,2014642,2002121,1980541,1957719,1936897,1898390,1816228	Gene ID= ENSG00000002822.15 TPM= 4.78 Transcript Type= protein_coding
chr7	1972654	1975311	1972654	1975311	-	transcript223.chr7.nnic@NA	transcript223.chr7.nnic	NA	1972654	1975311	Gene ID= novel_gene_chr7_224 TPM= 2.12 Transcript Type= NA
chr7	2234295	2242200	2234295	2242200	-	transcript231.chr7.nnic@MRM2	transcript231.chr7.nnic	protein_coding	2242162,2239418,2238015,2234295	2242200,2239676,2238937,2235564	Gene ID= ENSG00000122687.17 TPM= 2.12 Transcript Type= NA
chr7	2234231	2242200	2234231	2242200	-	transcript235.chr7.nnic@MRM2	transcript235.chr7.nnic	protein_coding	2242162,2239418,2234231	2242200,2239676,2235564	Gene ID= ENSG00000122687.17 TPM= 3.19 Transcript Type= NA
chr7	2234295	2242225	2234295	2242225	-	transcript240.chr7.nic@MRM2	transcript240.chr7.nic	protein_coding	2242162,2239181,2234295	2242225,2239707,2235564	Gene ID= ENSG00000122687.17 TPM= 3.19 Transcript Type= NA
chr7	2234291	2242198	2234291	2242198	-	ENST00000242257.12@MRM2	ENST00000242257.12	protein_coding	2242162,2239418,2234291	2242198,2239707,2235564	Gene ID= ENSG00000122687.17 TPM= 13.28 Transcript Type= protein_coding
chr7	2234295	2242189	2234295	2242189	-	ENST00000486040.1@MRM2	ENST00000486040.1	protein_coding	2242162,2239418,2238015,2234295	2242189,2239707,2238937,2235564	Gene ID= ENSG00000122687.17 TPM= 4.25 Transcript Type= processed_transcript
chr7	2242222	2251145	2242222	2251145	+	ENST00000356714.5@NUDT1	ENST00000356714.5	protein_coding	2242222,2244563,2249857,2250829	2242256,2244726,2250002,2251145	Gene ID= ENSG00000106268.15 TPM= 9.56 Transcript Type= protein_coding
chr7	2251770	2314464	2251770	2314464	-	ENST00000222990.7@SNX8	ENST00000222990.7	protein_coding	2314328,2278100,2275112,2271850,2269559,2264298,2263230,2257735,2257365,2256874,2251770	2314464,2278305,2275229,2271971,2269639,2264458,2263362,2257803,2257514,2257023,2255169	Gene ID= ENSG00000106266.10 TPM= 10.62 Transcript Type= protein_coding
chr7	2354093	2380745	2354093	2380745	+	transcript244.chr7.nnic@EIF3B	transcript244.chr7.nnic	protein_coding	2354093,2354524,2360710,2362645,2363070,2363632,2364372,2366317,2366525,2366999,2369472,2371777,2372673,2374528,2375389,2376950,2378689,2379134,2379394,2380279	2354195,2355420,2360902,2362764,2363127,2363760,2364529,2366448,2366591,2367045,2369682,2371849,2372795,2374606,2375527,2377075,2378766,2379242,2379511,2380745	Gene ID= ENSG00000106263.17 TPM= 5.49 Transcript Type= NA
chr7	2354810	2380743	2354810	2380743	+	transcript247.chr7.nnic@EIF3B	transcript247.chr7.nnic	protein_coding	2354810,2355234,2360710,2362645,2363070,2363632,2364372,2366317,2366525,2366999,2369472,2371777,2372673,2374528,2375389,2376950,2378689,2379134,2379394,2380204	2355083,2355420,2360902,2362764,2363127,2363760,2364529,2366448,2366591,2367045,2369682,2371849,2372795,2374606,2375527,2377075,2378766,2379242,2379511,2380743	Gene ID= ENSG00000106263.17 TPM= 5.84 Transcript Type= NA
chr7	2354856	2380743	2354856	2380743	+	transcript248.chr7.nic@EIF3B	transcript248.chr7.nic	protein_coding	2354856,2355234,2360710,2362645,2363070,2363632,2364372,2366317,2366525,2366999,2369472,2371777,2372673,2374528,2375389,2376950,2378689,2379134,2379394,2380204	2355116,2355420,2360902,2362764,2363127,2363760,2364529,2366448,2366591,2367045,2369682,2371849,2372795,2374606,2375527,2377075,2378766,2379242,2379511,2380743	Gene ID= ENSG00000106263.17 TPM= 6.9 Transcript Type= NA
chr7	2354856	2380745	2354856	2380745	+	transcript249.chr7.nic@EIF3B	transcript249.chr7.nic	protein_coding	2354856,2355234,2360710,2362645,2363070,2363632,2364372,2366317,2366525,2366999,2369472,2371777,2372673,2374528,2375389,2376950,2378689,2379134,2379394,2380279	2355116,2355420,2360902,2362764,2363127,2363760,2364529,2366448,2366591,2367045,2369682,2371849,2372795,2374606,2375527,2377075,2378766,2379242,2379511,2380745	Gene ID= ENSG00000106263.17 TPM= 5.49 Transcript Type= NA
chr7	2354866	2380743	2354866	2380743	+	ENST00000360876.8@EIF3B	ENST00000360876.8	protein_coding	2354866,2360710,2362645,2363070,2363632,2364372,2366317,2366525,2366999,2369472,2371777,2372673,2374528,2375389,2376950,2378689,2379134,2379394,2380204	2355420,2360902,2362764,2363127,2363760,2364529,2366448,2366591,2367045,2369682,2371849,2372795,2374606,2375527,2377075,2378766,2379242,2379511,2380743	Gene ID= ENSG00000106263.17 TPM= 75.94 Transcript Type= protein_coding
chr7	2354882	2380745	2354882	2380745	+	ENST00000397011.2@EIF3B	ENST00000397011.2	protein_coding	2354882,2360710,2362645,2363070,2363632,2364372,2366317,2366525,2366999,2369472,2371777,2372673,2374528,2375389,2376950,2378689,2379134,2379394,2380279	2355420,2360902,2362764,2363127,2363760,2364529,2366448,2366591,2367045,2369682,2371849,2372795,2374606,2375527,2377075,2378766,2379242,2379511,2380745	Gene ID= ENSG00000106263.17 TPM= 81.97 Transcript Type= protein_coding
chr7	2403560	2434579	2403560	2434579	+	ENST00000618655.1@CHST12	ENST00000618655.1	protein_coding	2403560,2432563	2403673,2434579	Gene ID= ENSG00000136213.9 TPM= 8.5 Transcript Type= protein_coding
chr7	2537851	2555547	2537851	2555547	-	transcript264.chr7.nnic@BRAT1	transcript264.chr7.nnic	protein_coding	2555487,2554305,2547324,2544909,2543590,2543204,2542120,2541718,2541298,2540979,2539786,2539544,2539179,2537851	2555547,2554447,2547478,2545056,2543962,2543323,2542211,2541836,2541484,2541052,2539888,2539642,2539351,2538944	Gene ID= ENSG00000106009.15 TPM= 6.37 Transcript Type= NA
chr7	2537877	2555548	2537877	2555548	-	transcript270.chr7.nic@BRAT1	transcript270.chr7.nic	protein_coding	2555487,2554305,2547324,2544909,2543204,2542120,2541718,2541298,2540979,2539786,2539544,2539179,2537877	2555548,2554447,2547478,2545056,2543962,2542211,2541836,2541484,2541052,2539888,2539642,2539351,2538764	Gene ID= ENSG00000106009.15 TPM= 3.19 Transcript Type= NA
chr7	2537877	2555727	2537877	2555727	-	ENST00000340611.8@BRAT1	ENST00000340611.8	protein_coding	2555487,2554305,2547324,2544909,2543590,2543204,2542120,2541718,2541298,2540979,2539786,2539544,2539179,2537877	2555727,2554447,2547478,2545056,2543962,2543323,2542211,2541836,2541484,2541052,2539888,2539642,2539351,2538764	Gene ID= ENSG00000106009.15 TPM= 60.54 Transcript Type= protein_coding
chr7	2558972	2614733	2558972	2614733	+	ENST00000623361.3@IQCE	ENST00000623361.3	protein_coding	2558972,2571526,2572192,2573418,2578242,2578476,2582580,2583637,2584236,2586208,2587822,2589907,2593022,2594886,2598465,2601441,2604881,2605876,2607124,2610044	2559217,2571654,2572326,2573488,2578355,2578526,2582650,2583709,2584285,2586371,2587877,2590106,2593126,2594976,2598632,2601464,2604991,2605997,2607227,2614733	Gene ID= ENSG00000106012.17 TPM= 3.54 Transcript Type= protein_coding
chr7	2558973	2594928	2558973	2594928	+	transcript285.chr7.nic@IQCE	transcript285.chr7.nic	protein_coding	2558973,2567116,2568954,2571526,2572192,2573418,2578242,2578476,2582580,2583637,2584236,2586208,2587822,2589907,2593022,2594886	2559217,2567163,2568999,2571654,2572326,2573488,2578355,2578526,2582650,2583709,2584285,2586371,2587877,2590106,2593126,2594928	Gene ID= ENSG00000106012.17 TPM= 3.19 Transcript Type= NA
chr7	2559057	2610278	2559057	2610278	+	ENST00000325997.13@IQCE	ENST00000325997.13	protein_coding	2559057,2571526,2572192,2573418,2578242,2578476,2582580,2583637,2584236,2586208,2587822,2589907,2593022,2594886,2598465,2601441,2604881,2605876,2607124,2610044	2559217,2571654,2572326,2573488,2578355,2578526,2582650,2583709,2584285,2586371,2587877,2590106,2593126,2594976,2598632,2601464,2604991,2605997,2607227,2610278	Gene ID= ENSG00000106012.17 TPM= 1.41 Transcript Type= nonsense_mediated_decay
chr7	2559079	2607555	2559079	2607555	+	ENST00000476665.5@IQCE	ENST00000476665.5	protein_coding	2559079,2567116,2568954,2571526,2572192,2573418,2578242,2578476,2582580,2583637,2584236,2586208,2587822,2589907,2593022,2594886,2598465,2601441,2604881,2605876,2607124	2559217,2567163,2568999,2571654,2572326,2573488,2578355,2578526,2582650,2583709,2584285,2586371,2587877,2590106,2593126,2594976,2598632,2601464,2604991,2605997,2607555	Gene ID= ENSG00000106012.17 TPM= 3.54 Transcript Type= protein_coding
chr7	2728561	2844342	2728561	2844342	-	transcript290.chr7.nic@GNA12	transcript290.chr7.nic	protein_coding	2843853,2794720,2733451,2728561	2844342,2795143,2733501,2731750	Gene ID= ENSG00000146535.13 TPM= 2.12 Transcript Type= NA
chr7	2728112	2844324	2728112	2844324	-	ENST00000275364.7@GNA12	ENST00000275364.7	protein_coding	2843853,2794928,2733451,2728112	2844324,2795143,2733501,2731750	Gene ID= ENSG00000146535.13 TPM= 20.18 Transcript Type= protein_coding
chr7	4682309	4771443	4682309	4771443	+	ENST00000328914.4@FOXK1	ENST00000328914.4	protein_coding	4682309,4740838,4754459,4755237,4756994,4759051,4759311,4761064,4762184	4682868,4741023,4754615,4755383,4757187,4759217,4759595,4761288,4771443	Gene ID= ENSG00000164916.10 TPM= 62.67 Transcript Type= protein_coding
chr7	4775622	4791768	4775622	4791768	+	ENST00000348624.4@AP5Z1	ENST00000348624.4	protein_coding	4775622,4781175,4781568,4783316,4783689,4784203,4784908,4785415,4785522,4786250,4787634,4788154,4788840,4789832,4790459,4790673,4791115	4775756,4781312,4781754,4783460,4783798,4784371,4785048,4785452,4785684,4786428,4787776,4788294,4788951,4789929,4790591,4790887,4791768	Gene ID= ENSG00000242802.6 TPM= 24.43 Transcript Type= protein_coding
chr7	4799105	4883719	4799105	4883719	-	ENST00000399583.3@RADIL	ENST00000399583.3	protein_coding	4883596,4877605,4836358,4834607,4832141,4822394,4817239,4816228,4815278,4805566,4803546,4801653,4800171,4799630,4799105	4883719,4878203,4836605,4835239,4832178,4822554,4817351,4816465,4815450,4805716,4803754,4801995,4800310,4799769,4799483	Gene ID= ENSG00000157927.16 TPM= 5.31 Transcript Type= protein_coding
chr7	4974017	4998167	4974017	4998167	+	transcript320.chr7.nic@RNF216P1	transcript320.chr7.nic	transcribed_unprocessed_pseudogene	4974017,4976301,4983671,4984910,4989063,4995475,4996610	4974161,4976436,4983773,4985075,4989177,4995582,4998167	Gene ID= ENSG00000196204.11 TPM= 7.79 Transcript Type= NA
chr7	4974017	4998165	4974017	4998165	+	transcript327.chr7.nic@RNF216P1	transcript327.chr7.nic	transcribed_unprocessed_pseudogene	4974017,4976301,4983671,4984962,4989063,4996610	4974161,4976436,4983773,4985075,4989177,4998165	Gene ID= ENSG00000196204.11 TPM= 2.47 Transcript Type= NA
chr7	4993509	4998167	4993509	4998167	+	ENST00000471244.1@RNF216P1	ENST00000471244.1	transcribed_unprocessed_pseudogene	4993509,4996610	4995582,4998167	Gene ID= ENSG00000196204.11 TPM= 1.06 Transcript Type= processed_transcript
chr7	4974037	4998165	4974037	4998165	+	ENST00000404006.5@RNF216P1	ENST00000404006.5	transcribed_unprocessed_pseudogene	4974037,4976301,4983671,4984910,4989063,4996610	4974161,4976436,4983773,4985075,4989177,4998165	Gene ID= ENSG00000196204.11 TPM= 4.6 Transcript Type= processed_transcript
chr7	5045922	5069488	5045922	5069488	+	ENST00000396912.1@RBAK	ENST00000396912.1	protein_coding	5045922,5048033,5057295,5057684,5063695	5046396,5048091,5057421,5057779,5069488	Gene ID= ENSG00000146587.17 TPM= 6.37 Transcript Type= protein_coding
chr7	5190188	5233826	5190188	5233826	+	ENST00000288828.8@WIPI2	ENST00000288828.8	protein_coding	5190188,5193118,5199576,5214535,5216563,5217090,5217922,5222602,5225823,5227180,5228104,5229608,5230835	5190493,5193171,5199658,5214704,5216659,5217187,5218014,5222672,5225930,5227344,5228211,5229738,5233826	Gene ID= ENSG00000157954.14 TPM= 1.06 Transcript Type= protein_coding
chr7	5190196	5231524	5190196	5231524	+	ENST00000401525.7@WIPI2	ENST00000401525.7	protein_coding	5190196,5199576,5214535,5216563,5217090,5217922,5222602,5225823,5227180,5228104,5229608,5230835	5190493,5199658,5214704,5216659,5217187,5218014,5222672,5225930,5227344,5228211,5229738,5231524	Gene ID= ENSG00000157954.14 TPM= 14.87 Transcript Type= protein_coding
chr7	5282930	5306870	5282930	5306870	+	ENST00000396872.7@SLC29A4	ENST00000396872.7	protein_coding	5282930,5287809,5290732,5291124,5291693,5294860,5296936,5298988,5299240,5300422,5302797	5283082,5287985,5290863,5291237,5291821,5294934,5297198,5299126,5299427,5300662,5306870	Gene ID= ENSG00000164638.10 TPM= 1.06 Transcript Type= protein_coding
chr7	5282969	5304060	5282969	5304060	+	ENST00000297195.8@SLC29A4	ENST00000297195.8	protein_coding	5282969,5287806,5290732,5291124,5291693,5294860,5296936,5298988,5299240,5300422,5302797	5283082,5287985,5290863,5291237,5291821,5294934,5297198,5299126,5299427,5300662,5304060	Gene ID= ENSG00000164638.10 TPM= 4.25 Transcript Type= protein_coding
chr7	5374186	5423851	5374186	5423851	-	transcript360.chr7.nnic@TNRC18	transcript360.chr7.nnic	protein_coding	5423441,5421060,5394440,5390485,5387672,5377922,5377371,5376847,5376034,5374186	5423851,5421489,5394595,5390630,5389338,5378026,5377576,5376993,5376224,5374484	Gene ID= ENSG00000182095.14 TPM= 37.18 Transcript Type= NA
chr7	5392873	5423851	5392873	5423851	-	transcript365.chr7.nic@TNRC18	transcript365.chr7.nic	protein_coding	5423441,5421060,5392873	5423851,5421489,5394595	Gene ID= ENSG00000182095.14 TPM= 5.31 Transcript Type= NA
chr7	5337344	5338635	5337344	5338635	+	transcript369.chr7.nnic@NA	transcript369.chr7.nnic	NA	5337344	5338635	Gene ID= novel_gene_chr7_370 TPM= 2.12 Transcript Type= NA
chr7	5425770	5426401	5425770	5426401	+	ENST00000609130.1@AC092171.4	ENST00000609130.1	lincRNA	5425770	5426401	Gene ID= ENSG00000272953.1 TPM= 2.12 Transcript Type= lincRNA
chr7	5527151	5530709	5527151	5530709	-	ENST00000331789.9@ACTB	ENST00000331789.9	protein_coding	5530524,5529535,5529161,5528281,5528004,5527151	5530709,5529663,5529400,5528719,5528185,5527891	Gene ID= ENSG00000075624.13 TPM= 397.25 Transcript Type= protein_coding
chr7	5527151	5530602	5527151	5530602	-	transcript381.chr7.nic@ACTB	transcript381.chr7.nic	protein_coding	5530524,5529535,5529161,5528281,5528004,5527151	5530602,5529663,5529400,5529059,5528185,5527891	Gene ID= ENSG00000075624.13 TPM= 70.1 Transcript Type= NA
chr7	5527156	5530601	5527156	5530601	-	ENST00000462494.5@ACTB	ENST00000462494.5	protein_coding	5530524,5529535,5528281,5528004,5527156	5530601,5529663,5529400,5528185,5527891	Gene ID= ENSG00000075624.13 TPM= 76.48 Transcript Type= retained_intron
chr7	5527156	5530601	5527156	5530601	-	ENST00000425660.5@ACTB	ENST00000425660.5	protein_coding	5530524,5529535,5529161,5529019,5528281,5528004,5527156	5530601,5529663,5529400,5529059,5528719,5528185,5527891	Gene ID= ENSG00000075624.13 TPM= 118.96 Transcript Type= nonsense_mediated_decay
chr7	5527152	5530597	5527152	5530597	-	transcript387.chr7.nnic@NA	transcript387.chr7.nnic	NA	5527152	5530597	Gene ID= novel_gene_chr7_388 TPM= 35.05 Transcript Type= NA
chr7	5592823	5606655	5592823	5606655	+	ENST00000382361.7@FSCN1	ENST00000382361.7	protein_coding	5592823,5603257,5603496,5603863,5605272	5593768,5603413,5603617,5604030,5606655	Gene ID= ENSG00000075618.17 TPM= 37.18 Transcript Type= protein_coding
chr7	5607705	5609147	5607705	5609147	+	transcript417.chr7.nnic@NA	transcript417.chr7.nnic	NA	5607705	5609147	Gene ID= novel_gene_chr7_418 TPM= 6.37 Transcript Type= NA
chr7	5609851	5611042	5609851	5611042	-	transcript421.chr7.nnic@NA	transcript421.chr7.nnic	NA	5609851	5611042	Gene ID= novel_gene_chr7_422 TPM= 2.12 Transcript Type= NA
chr7	5620047	5781696	5620047	5781696	-	ENST00000425013.6@RNF216	ENST00000425013.6	protein_coding	5781541,5761003,5752846,5740973,5739276,5730715,5729432,5725324,5721033,5716716,5715053,5712715,5711761,5652413,5641154,5624056,5620047	5781696,5761138,5752979,5741644,5739352,5730817,5729596,5725438,5721172,5716766,5715190,5712863,5711839,5652510,5641376,5624125,5623179	Gene ID= ENSG00000011275.18 TPM= 9.56 Transcript Type= protein_coding
chr7	5622607	5781739	5622607	5781739	-	ENST00000389902.7@RNF216	ENST00000389902.7	protein_coding	5781541,5761003,5752846,5740973,5739276,5730715,5729432,5725324,5721033,5716716,5715053,5712715,5711761,5652413,5641154,5624056,5622607	5781739,5761138,5752979,5741815,5739352,5730817,5729596,5725438,5721172,5716766,5715190,5712863,5711839,5652510,5641376,5624125,5623179	Gene ID= ENSG00000011275.18 TPM= 7.44 Transcript Type= protein_coding
chr7	5621172	5695546	5621172	5695546	-	transcript401.chr7.nnic@RNF216	transcript401.chr7.nnic	protein_coding	5695369,5652413,5650625,5641154,5624056,5621172	5695546,5652510,5650730,5641376,5624125,5623179	Gene ID= ENSG00000011275.18 TPM= 2.12 Transcript Type= NA
chr7	5620047	5695546	5620047	5695546	-	transcript404.chr7.nnic@RNF216	transcript404.chr7.nnic	protein_coding	5695369,5652413,5641154,5624056,5620047	5695546,5652510,5641376,5624125,5623179	Gene ID= ENSG00000011275.18 TPM= 28.68 Transcript Type= NA
chr7	5684972	5686246	5684972	5686246	+	transcript419.chr7.nnic@NA	transcript419.chr7.nnic	NA	5684972	5686246	Gene ID= novel_gene_chr7_420 TPM= 8.5 Transcript Type= NA
chr7	5898734	5925974	5898734	5925974	+	ENST00000325974.8@CCZ1	ENST00000325974.8	protein_coding	5898734,5900284,5900473,5900855,5901657,5902661,5905094,5910035,5911861,5912843,5918867,5919849,5923387,5923835,5925632	5898919,5900381,5900566,5900932,5901704,5902744,5905269,5910116,5911922,5912954,5918900,5919966,5923545,5923962,5925974	Gene ID= ENSG00000122674.11 TPM= 129.58 Transcript Type= protein_coding
chr7	5909108	5910893	5909108	5910893	-	transcript433.chr7.nnic@NA	transcript433.chr7.nnic	NA	5909108	5910893	Gene ID= novel_gene_chr7_434 TPM= 3.19 Transcript Type= NA
chr7	5973239	6009125	5973239	6009125	-	ENST00000265849.11@PMS2	ENST00000265849.11	protein_coding	6008997,6005892,6003972,6003690,6002453,5999108,5997326,5995534,5991973,5989800,5986759,5982824,5978596,5977588,5973239	6009125,6006031,6004058,6003792,6002636,5999275,5997423,5995633,5992057,5989955,5987620,5982991,5978696,5977757,5973542	Gene ID= ENSG00000122512.14 TPM= 9.56 Transcript Type= protein_coding
chr7	6009239	6023834	6009239	6023834	+	transcript455.chr7.nnic@AIMP2	transcript455.chr7.nnic	protein_coding	6009239,6015146,6017814,6023303	6009378,6015352,6018045,6023834	Gene ID= ENSG00000106305.9 TPM= 7.44 Transcript Type= NA
chr7	6009245	6023834	6009245	6023834	+	ENST00000223029.7@AIMP2	ENST00000223029.7	protein_coding	6009245,6015146,6017814,6023303	6009498,6015352,6018045,6023834	Gene ID= ENSG00000106305.9 TPM= 60.54 Transcript Type= protein_coding
chr7	6019749	6021357	6019749	6021357	+	transcript459.chr7.nnic@NA	transcript459.chr7.nnic	NA	6019749	6021357	Gene ID= novel_gene_chr7_460 TPM= 10.62 Transcript Type= NA
chr7	6022244	6059230	6022244	6059230	-	ENST00000199389.10@EIF2AK1	ENST00000199389.10	protein_coding	6058966,6054546,6049912,6048807,6046992,6046071,6044562,6042933,6040892,6038560,6037424,6028918,6028615,6026728,6022244	6059230,6054704,6050045,6048844,6047091,6046151,6044661,6042993,6041219,6038671,6037524,6029032,6028697,6026961,6024801	Gene ID= ENSG00000086232.12 TPM= 15.93 Transcript Type= protein_coding
chr7	6104884	6161564	6104884	6161564	+	ENST00000306177.9@USP42	ENST00000306177.9	protein_coding	6104884,6111125,6115323,6135841,6139092,6140128,6140914,6142932,6144085,6145516,6146148,6147739,6149583,6150412,6153756,6156754,6159450,6160555	6105032,6111374,6115523,6135951,6139194,6140195,6140984,6143014,6144196,6145656,6146248,6147892,6150302,6150506,6155195,6157055,6159493,6161564	Gene ID= ENSG00000106346.11 TPM= 6.37 Transcript Type= protein_coding
chr7	6161776	6272644	6161776	6272644	-	ENST00000350796.7@CYTH3	ENST00000350796.7	protein_coding	6272474,6190449,6187657,6187050,6177823,6173653,6171202,6170830,6170535,6165734,6165545,6165273,6161776	6272644,6190531,6187721,6187116,6177941,6173733,6171314,6170978,6170646,6165810,6165616,6165427,6165016	Gene ID= ENSG00000008256.15 TPM= 36.11 Transcript Type= protein_coding
chr7	6329411	6348939	6329411	6348939	-	transcript469.chr7.nnic@FAM220A	transcript469.chr7.nnic	protein_coding	6348472,6329411	6348939,6331235	Gene ID= ENSG00000178397.12 TPM= 6.37 Transcript Type= NA
chr7	6374523	6403977	6374523	6403977	+	ENST00000348035.8@RAC1	ENST00000348035.8	protein_coding	6374523,6387212,6391924,6400126,6401868,6402316	6374770,6387283,6392041,6400188,6402027,6403977	Gene ID= ENSG00000136238.17 TPM= 143.39 Transcript Type= protein_coding
chr7	6374539	6402520	6374539	6402520	+	ENST00000356142.4@RAC1	ENST00000356142.4	protein_coding	6374539,6387212,6391924,6398662,6400126,6401868,6402316	6374770,6387283,6392041,6398718,6400188,6402027,6402520	Gene ID= ENSG00000136238.17 TPM= 4.25 Transcript Type= protein_coding
chr7	6409129	6448012	6409129	6448012	-	ENST00000297056.10@DAGLB	ENST00000297056.10	protein_coding	6447748,6445953,6436362,6434762,6432837,6430480,6425988,6424752,6421727,6416841,6416627,6412966,6412811,6410130,6409129	6448012,6446104,6436533,6435020,6432959,6430607,6426114,6424835,6421804,6416921,6416754,6413034,6412883,6410380,6410035	Gene ID= ENSG00000164535.14 TPM= 14.87 Transcript Type= protein_coding
chr7	6461081	6484242	6461081	6484242	-	ENST00000258739.8@KDELR2	ENST00000258739.8	protein_coding	6483967,6474184,6469596,6466071,6461081	6484242,6474284,6469754,6466323,6463175	Gene ID= ENSG00000136240.9 TPM= 86.04 Transcript Type= protein_coding
chr7	6577434	6588978	6577434	6588978	+	ENST00000396713.6@ZDHHC4	ENST00000396713.6	protein_coding	6577434,6578566,6580555,6581607,6582073,6583306,6585016,6588617	6577720,6578720,6580678,6581680,6582251,6583431,6585260,6588978	Gene ID= ENSG00000136247.14 TPM= 7.44 Transcript Type= protein_coding
chr7	6577453	6588926	6577453	6588926	+	ENST00000335965.10@ZDHHC4	ENST00000335965.10	protein_coding	6577453,6578566,6580555,6581607,6582073,6583306,6585016,6588617	6577498,6578720,6580678,6581680,6582251,6583431,6585260,6588926	Gene ID= ENSG00000136247.14 TPM= 12.75 Transcript Type= protein_coding
chr7	6577434	6588978	6577434	6588978	+	ENST00000396707.6@ZDHHC4	ENST00000396707.6	protein_coding	6577434,6577590,6578566,6580555,6581607,6582073,6583306,6585016,6588617	6577498,6577720,6578720,6580678,6581680,6582251,6583431,6585260,6588978	Gene ID= ENSG00000136247.14 TPM= 8.5 Transcript Type= protein_coding
chr7	6577434	6588931	6577434	6588931	+	ENST00000405731.7@ZDHHC4	ENST00000405731.7	protein_coding	6577434,6578501,6580555,6581607,6582073,6583306,6585016,6588617	6577498,6578720,6580678,6581680,6582251,6583431,6585260,6588931	Gene ID= ENSG00000136247.14 TPM= 4.25 Transcript Type= protein_coding
chr7	6590017	6608726	6590017	6608726	+	ENST00000344417.9@C7orf26	ENST00000344417.9	protein_coding	6590017,6591646,6594435,6599829,6602101,6607960	6590475,6591867,6594600,6600356,6602140,6608726	Gene ID= ENSG00000146576.12 TPM= 15.93 Transcript Type= protein_coding
chr7	6615610	6624282	6615610	6624282	+	transcript517.chr7.nnic@ZNF853	transcript517.chr7.nnic	protein_coding	6615610,6617185,6617585,6621122	6616186,6617307,6617662,6624282	Gene ID= ENSG00000236609.3 TPM= 3.19 Transcript Type= NA
chr7	6615499	6624290	6615499	6624290	+	transcript519.chr7.nnic@ZNF853	transcript519.chr7.nnic	protein_coding	6615499,6617185,6621122	6616186,6617307,6624290	Gene ID= ENSG00000236609.3 TPM= 21.24 Transcript Type= NA
chr7	6615617	6624290	6615617	6624290	+	ENST00000457543.3@ZNF853	ENST00000457543.3	protein_coding	6615617,6617190,6621122	6616186,6617307,6624290	Gene ID= ENSG00000236609.3 TPM= 54.17 Transcript Type= protein_coding
chr7	6637322	6656432	6637322	6656432	+	ENST00000382252.5@ZNF316	ENST00000382252.5	protein_coding	6637322,6637846,6639042,6641825,6642382,6642964,6643822,6644480,6652303	6637447,6638009,6639141,6641962,6642764,6643073,6643948,6644593,6656432	Gene ID= ENSG00000205903.6 TPM= 25.49 Transcript Type= protein_coding
chr7	6688433	6706923	6688433	6706923	-	ENST00000405858.5@ZNF12	ENST00000405858.5	protein_coding	6706432,6705159,6697685,6697339,6688433	6706923,6705223,6697811,6697434,6692703	Gene ID= ENSG00000164631.18 TPM= 6.37 Transcript Type= protein_coding
chr7	6798941	6826770	6798941	6826770	-	ENST00000626257.2@CCZ1B	ENST00000626257.2	protein_coding	6826078,6824640,6824089,6823313,6822281,6819766,6814764,6812976,6811952,6806004,6804938,6801365,6800948,6798941	6826770,6824737,6824166,6823360,6822364,6819941,6814845,6813037,6812063,6806037,6805055,6801523,6801075,6799279	Gene ID= ENSG00000146574.15 TPM= 6.37 Transcript Type= protein_coding
chr7	7232486	7236261	7232486	7236261	-	transcript546.chr7.nnic@NA	transcript546.chr7.nnic	NA	7232486	7236261	Gene ID= novel_gene_chr7_547 TPM= 7.44 Transcript Type= NA
chr7	7552462	7566996	7552462	7566996	-	ENST00000609497.5@AC004982.2	ENST00000609497.5	lincRNA	7565914,7555156,7552462	7566996,7555189,7552922	Gene ID= ENSG00000272894.5 TPM= 3.19 Transcript Type= lincRNA
chr7	7566872	7607496	7566872	7607496	+	ENST00000340080.8@MIOS	ENST00000340080.8	protein_coding	7566872,7567607,7568026,7572436,7574098,7583118,7585636,7588498,7589405,7594980,7596257,7605942,7606996	7567072,7567688,7568123,7573769,7574196,7583372,7585805,7588563,7589563,7595132,7596461,7606071,7607496	Gene ID= ENSG00000164654.15 TPM= 5.31 Transcript Type= protein_coding
chr7	7567037	7607496	7567037	7607496	+	transcript551.chr7.nic@MIOS	transcript551.chr7.nic	protein_coding	7567037,7567607,7568026,7572436,7574098,7583118,7585636,7588498,7589405,7594980,7596257,7605942,7606996	7567484,7567688,7568123,7573769,7574196,7583372,7585805,7588563,7589563,7595132,7596461,7606071,7607496	Gene ID= ENSG00000164654.15 TPM= 3.19 Transcript Type= NA
chr7	7566875	7607223	7566875	7607223	+	ENST00000405785.5@MIOS	ENST00000405785.5	protein_coding	7566875,7568026,7572436,7574098,7583118,7585636,7588498,7589405,7594980,7596257,7605942,7606996	7567072,7568123,7573769,7574196,7583372,7585805,7588563,7589563,7595132,7596461,7606071,7607223	Gene ID= ENSG00000164654.15 TPM= 2.12 Transcript Type= protein_coding
chr7	7566864	7607496	7566864	7607496	+	transcript557.chr7.nic@MIOS	transcript557.chr7.nic	protein_coding	7566864,7572436,7574098,7583118,7585636,7588498,7589405,7594980,7596257,7605942,7606996	7567072,7573769,7574196,7583372,7585805,7588563,7589563,7595132,7596461,7606071,7607496	Gene ID= ENSG00000164654.15 TPM= 6.37 Transcript Type= NA
chr7	7566903	7607496	7566903	7607496	+	transcript558.chr7.nnic@MIOS	transcript558.chr7.nnic	protein_coding	7566903,7568026,7572436,7574098,7583118,7585636,7588498,7594980,7596257,7605942,7606996	7567688,7568123,7573769,7574196,7583372,7585805,7588563,7595132,7596461,7606071,7607496	Gene ID= ENSG00000164654.15 TPM= 3.19 Transcript Type= NA
chr7	7567016	7607223	7567016	7607223	+	transcript559.chr7.nic@MIOS	transcript559.chr7.nic	protein_coding	7567016,7572436,7574098,7583118,7585636,7588498,7589405,7594980,7596257,7605942,7606996	7567484,7573769,7574196,7583372,7585805,7588563,7589563,7595132,7596461,7606071,7607223	Gene ID= ENSG00000164654.15 TPM= 2.12 Transcript Type= NA
chr7	7635186	7640514	7635186	7640514	-	transcript568.chr7.nic@RPA3	transcript568.chr7.nic	protein_coding	7640320,7639070,7637864,7635186	7640514,7639144,7637972,7637082	Gene ID= ENSG00000106399.11 TPM= 3.19 Transcript Type= NA
chr7	7636518	7718607	7636518	7718607	-	ENST00000223129.8@RPA3	ENST00000223129.8	protein_coding	7718515,7715175,7687228,7685830,7640320,7639070,7637864,7636518	7718607,7715226,7687328,7685998,7641175,7639144,7637972,7637082	Gene ID= ENSG00000106399.11 TPM= 3.19 Transcript Type= protein_coding
chr7	7640682	7872113	7640682	7872113	+	transcript576.chr7.nic@UMAD1	transcript576.chr7.nic	protein_coding	7640682,7673309,7801670,7868330	7640821,7673453,7801743,7872113	Gene ID= ENSG00000219545.11 TPM= 4.25 Transcript Type= NA
chr7	7640682	7879223	7640682	7879223	+	transcript577.chr7.nic@UMAD1	transcript577.chr7.nic	protein_coding	7640682,7673309,7801670,7877281	7640821,7673453,7801743,7879223	Gene ID= ENSG00000219545.11 TPM= 7.44 Transcript Type= NA
chr7	7689198	7879223	7689198	7879223	+	transcript584.chr7.nnic@UMAD1	transcript584.chr7.nnic	protein_coding	7689198,7801670,7877281	7689460,7801743,7879223	Gene ID= ENSG00000219545.11 TPM= 3.19 Transcript Type= NA
chr7	7640776	7879185	7640776	7879185	+	ENST00000636849.1@UMAD1	ENST00000636849.1	protein_coding	7640776,7673322,7801670,7877281	7640821,7673453,7801743,7879185	Gene ID= ENSG00000219545.11 TPM= 8.5 Transcript Type= protein_coding
chr7	7713400	7716201	7713400	7716201	-	transcript587.chr7.nnic@NA	transcript587.chr7.nnic	NA	7713400	7716201	Gene ID= novel_gene_chr7_588 TPM= 3.19 Transcript Type= NA
chr7	7968794	8089080	7968794	8089080	+	ENST00000223145.9@GLCCI1	ENST00000223145.9	protein_coding	7968794,8003908,8022483,8055433,8060096,8070921,8084897,8086193	7969807,8004059,8022569,8055549,8060248,8071131,8085017,8089080	Gene ID= ENSG00000106415.12 TPM= 5.31 Transcript Type= protein_coding
chr7	8113184	8262191	8113184	8262191	-	transcript599.chr7.nnic@ICA1	transcript599.chr7.nnic	protein_coding	8262094,8235910,8232590,8228601,8221275,8218305,8158527,8157116,8143875,8141765,8138985,8138840,8127873,8113184	8262191,8235940,8232755,8228673,8221398,8218503,8158652,8157214,8143972,8141817,8139047,8138881,8128142,8114044	Gene ID= ENSG00000003147.17 TPM= 14.87 Transcript Type= NA
chr7	8113187	8262612	8113187	8262612	-	ENST00000406470.6@ICA1	ENST00000406470.6	protein_coding	8262440,8235910,8232590,8228601,8221275,8218305,8158527,8157116,8143875,8141765,8138985,8138840,8127873,8113187	8262612,8236005,8232755,8228673,8221398,8218503,8158652,8157214,8143972,8141817,8139047,8138881,8128142,8114044	Gene ID= ENSG00000003147.17 TPM= 2.12 Transcript Type= protein_coding
chr7	8113772	8262262	8113772	8262262	-	transcript610.chr7.nic@ICA1	transcript610.chr7.nic	protein_coding	8262000,8235910,8232590,8228601,8221275,8218305,8158527,8157116,8143875,8141765,8138985,8138840,8127873,8113772	8262262,8236005,8232755,8228673,8221398,8218503,8158652,8157214,8143972,8141817,8139047,8138881,8128142,8114044	Gene ID= ENSG00000003147.17 TPM= 14.16 Transcript Type= NA
chr7	8143949	8262280	8143949	8262280	-	transcript626.chr7.nic@ICA1	transcript626.chr7.nic	protein_coding	8262094,8235910,8232590,8228601,8221275,8218305,8158527,8157116,8143949	8262280,8236005,8232755,8228673,8221398,8218503,8158652,8157214,8143972	Gene ID= ENSG00000003147.17 TPM= 18.06 Transcript Type= NA
chr7	8113772	8262153	8113772	8262153	-	ENST00000455539.5@ICA1	ENST00000455539.5	protein_coding	8262094,8235910,8232590,8228601,8227638,8221275,8218305,8158527,8157116,8143875,8141765,8138985,8138840,8127873,8113772	8262153,8236005,8232755,8228673,8227851,8221398,8218503,8158652,8157214,8143972,8141817,8139047,8138881,8128142,8114044	Gene ID= ENSG00000003147.17 TPM= 1.06 Transcript Type= nonsense_mediated_decay
chr7	8121624	8124468	8121624	8124468	+	transcript646.chr7.nnic@NA	transcript646.chr7.nnic	NA	8121624	8124468	Gene ID= novel_gene_chr7_647 TPM= 8.5 Transcript Type= NA
chr7	8262233	8262821	8262233	8262821	+	ENST00000458624.1@AC007009.1	ENST00000458624.1	antisense_RNA	8262233,8262580	8262419,8262821	Gene ID= ENSG00000244239.1 TPM= 9.56 Transcript Type= antisense_RNA
chr7	10227216	10239819	10227216	10239819	-	transcript662.chr7.nnic@NA	transcript662.chr7.nnic	NA	10239765,10228367,10227216	10239819,10228472,10227541	Gene ID= novel_gene_chr7_663 TPM= 2.12 Transcript Type= NA
chr7	10235200	10239820	10235200	10239820	-	transcript667.chr7.nnic@NA	transcript667.chr7.nnic	NA	10235200	10239820	Gene ID= novel_gene_chr7_668 TPM= 15.93 Transcript Type= NA
chr7	10931951	10940256	10931951	10940256	-	ENST00000339600.5@NDUFA4	ENST00000339600.5	protein_coding	10940016,10938808,10938090,10931951	10940256,10938896,10938147,10933692	Gene ID= ENSG00000189043.9 TPM= 1459.41 Transcript Type= protein_coding
chr7	10973837	10982635	10973837	10982635	+	transcript687.chr7.nic@PHF14	transcript687.chr7.nic	protein_coding	10973837,10974835,10982372	10974324,10974945,10982635	Gene ID= ENSG00000106443.15 TPM= 2.12 Transcript Type= NA
chr7	10973904	11169630	10973904	11169630	+	ENST00000634607.1@PHF14	ENST00000634607.1	protein_coding	10973904,10974835,10982372,10990703,11013747,11022868,11028681,11035640,11036418,11036985,11038760,11040672,11042683,11051612,11061791,11061964,11111350,11169416	10974324,10974945,10983159,10990847,11013906,11022979,11028818,11035786,11036688,11037091,11038855,11040775,11042814,11051780,11061841,11062085,11111467,11169630	Gene ID= ENSG00000106443.15 TPM= 3.19 Transcript Type= protein_coding
chr7	10973889	11169623	10973889	11169623	+	ENST00000423760.6@PHF14	ENST00000423760.6	protein_coding	10973889,10974835,10990703,11013747,11022868,11028681,11035640,11036418,11036985,11038760,11040672,11042683,11051612,11061791,11061964,11111350,11169416	10974324,10974945,10990847,11013906,11022979,11028818,11035786,11036688,11037091,11038855,11040775,11042814,11051780,11061841,11062085,11111467,11169623	Gene ID= ENSG00000106443.15 TPM= 1.06 Transcript Type= nonsense_mediated_decay
chr7	12211301	12232728	12211301	12232728	+	transcript693.chr7.nic@TMEM106B	transcript693.chr7.nic	protein_coding	12211301,12214809,12218458,12224226,12229679,12230389,12231062,12231837	12211547,12215027,12218521,12224385,12229819,12230438,12231115,12232728	Gene ID= ENSG00000106460.18 TPM= 2.12 Transcript Type= NA
chr7	12687286	12690934	12687286	12690934	+	ENST00000396663.2@ARL4A	ENST00000396663.2	protein_coding	12687286,12688166	12687728,12690934	Gene ID= ENSG00000122644.12 TPM= 2.12 Transcript Type= protein_coding
chr7	12686908	12689176	12686908	12689176	+	ENST00000396664.2@ARL4A	ENST00000396664.2	protein_coding	12686908,12688169	12687043,12689176	Gene ID= ENSG00000122644.12 TPM= 2.12 Transcript Type= protein_coding
chr7	12807421	12810589	12807421	12810589	-	transcript709.chr7.nnic@NA	transcript709.chr7.nnic	NA	12807421	12810589	Gene ID= novel_gene_chr7_710 TPM= 6.37 Transcript Type= NA
chr7	12820222	12821188	12820222	12821188	-	transcript711.chr7.nnic@NA	transcript711.chr7.nnic	NA	12820222	12821188	Gene ID= novel_gene_chr7_712 TPM= 2.12 Transcript Type= NA
chr7	13891228	13989946	13891228	13989946	-	ENST00000430479.5@ETV1	ENST00000430479.5	protein_coding	13989563,13989268,13989008,13988086,13986638,13977427,13939117,13935708,13931502,13911239,13909632,13906430,13900738,13891228	13989946,13989464,13989139,13988173,13986685,13977480,13939246,13935896,13931749,13911307,13909700,13906599,13900839,13896087	Gene ID= ENSG00000006468.13 TPM= 2.66 Transcript Type= protein_coding
chr7	13893268	13990648	13893268	13990648	-	transcript719.chr7.nic@ETV1	transcript719.chr7.nic	protein_coding	13990553,13989008,13988086,13986638,13977427,13939117,13935708,13931502,13911239,13909632,13906430,13900738,13893268	13990648,13989139,13988173,13986685,13977480,13939246,13935896,13931749,13911307,13909700,13906599,13900839,13896087	Gene ID= ENSG00000006468.13 TPM= 9.03 Transcript Type= NA
chr7	13894381	13989947	13894381	13989947	-	ENST00000405218.6@ETV1	ENST00000405218.6	protein_coding	13989563,13989008,13988086,13986638,13977427,13939117,13935708,13931502,13911239,13909632,13906430,13900738,13894381	13989947,13989139,13988173,13986685,13977480,13939246,13935896,13931749,13911307,13909700,13906599,13900839,13896087	Gene ID= ENSG00000006468.13 TPM= 6.02 Transcript Type= protein_coding
chr7	13900373	13989668	13900373	13989668	-	transcript724.chr7.nic@ETV1	transcript724.chr7.nic	protein_coding	13989563,13989268,13989008,13988086,13986638,13977427,13939117,13935708,13931502,13911239,13909632,13906430,13900373	13989668,13989464,13989139,13988173,13986685,13977480,13939246,13935896,13931749,13911307,13909700,13906599,13900839	Gene ID= ENSG00000006468.13 TPM= 3.9 Transcript Type= NA
chr7	13893268	13988873	13893268	13988873	-	ENST00000405358.8@ETV1	ENST00000405358.8	protein_coding	13988680,13988086,13986638,13977427,13939117,13935708,13931502,13911239,13909632,13906430,13900738,13893268	13988873,13988173,13986685,13977480,13939246,13935896,13931749,13911307,13909700,13906599,13900839,13896087	Gene ID= ENSG00000006468.13 TPM= 7.79 Transcript Type= protein_coding
chr7	13894155	13988873	13894155	13988873	-	transcript731.chr7.nnic@ETV1	transcript731.chr7.nnic	protein_coding	13988814,13988086,13986638,13977427,13939117,13935708,13931502,13911239,13909632,13906430,13900738,13894155	13988873,13988173,13986685,13977480,13939246,13935896,13931749,13911307,13909700,13906599,13900839,13896087	Gene ID= ENSG00000006468.13 TPM= 2.12 Transcript Type= NA
chr7	13900373	13989694	13900373	13989694	-	transcript732.chr7.nic@ETV1	transcript732.chr7.nic	protein_coding	13989563,13989008,13988086,13986638,13977427,13939117,13935708,13931502,13911239,13909632,13906430,13900373	13989694,13989139,13988173,13986685,13977480,13939246,13935896,13931749,13911307,13909700,13906599,13900839	Gene ID= ENSG00000006468.13 TPM= 7.62 Transcript Type= NA
chr7	13894155	13986514	13894155	13986514	-	ENST00000403527.5@ETV1	ENST00000403527.5	protein_coding	13986116,13977427,13939117,13935708,13931502,13911239,13909632,13906430,13900738,13894155	13986514,13977480,13939246,13935896,13931749,13911307,13909700,13906599,13900839,13896087	Gene ID= ENSG00000006468.13 TPM= 1.06 Transcript Type= protein_coding
chr7	13961057	13963542	13961057	13963542	+	transcript737.chr7.nnic@NA	transcript737.chr7.nnic	NA	13961057	13963542	Gene ID= novel_gene_chr7_738 TPM= 2.12 Transcript Type= NA
chr7	13974325	13975577	13974325	13975577	+	transcript739.chr7.nnic@NA	transcript739.chr7.nnic	NA	13974325	13975577	Gene ID= novel_gene_chr7_740 TPM= 4.25 Transcript Type= NA
chr7	13976213	13977492	13976213	13977492	+	transcript741.chr7.nnic@NA	transcript741.chr7.nnic	NA	13976213	13977492	Gene ID= novel_gene_chr7_742 TPM= 2.12 Transcript Type= NA
chr7	15611212	15686812	15611212	15686812	-	ENST00000262041.5@MEOX2	ENST00000262041.5	protein_coding	15685886,15626746,15611212	15686812,15626918,15612611	Gene ID= ENSG00000106511.5 TPM= 7.44 Transcript Type= protein_coding
chr7	16599776	16645817	16599776	16645817	-	ENST00000306999.6@ANKMY2	ENST00000306999.6	protein_coding	16645507,16636391,16627040,16624983,16615744,16610549,16609630,16604721,16602380,16599776	16645817,16636455,16627178,16625081,16615904,16610763,16609765,16604849,16602509,16600945	Gene ID= ENSG00000106524.8 TPM= 60.54 Transcript Type= protein_coding
chr7	16646131	16706523	16646131	16706523	+	ENST00000258761.7@BZW2	ENST00000258761.7	protein_coding	16646131,16665437,16674412,16681301,16682780,16685905,16689797,16694834,16696915,16698048,16704547,16706060	16646288,16665501,16674588,16681404,16682845,16686040,16689906,16695004,16697061,16698186,16704669,16706523	Gene ID= ENSG00000136261.14 TPM= 108.73 Transcript Type= protein_coding
chr7	16646134	16706512	16646134	16706512	+	ENST00000433922.6@BZW2	ENST00000433922.6	protein_coding	16646134,16665437,16674412,16681301,16682780,16685905,16689797,16694834,16696915,16698048,16704547,16706060	16646304,16665501,16674588,16681404,16682845,16686040,16689906,16695004,16697061,16698186,16704669,16706512	Gene ID= ENSG00000136261.14 TPM= 11.28 Transcript Type= protein_coding
chr7	16661200	16706512	16661200	16706512	+	transcript763.chr7.nic@BZW2	transcript763.chr7.nic	protein_coding	16661200,16665437,16674412,16681301,16682780,16685905,16689797,16694834,16696915,16698048,16704547,16706060	16661252,16665501,16674588,16681404,16682845,16686040,16689906,16695004,16697061,16698186,16704669,16706512	Gene ID= ENSG00000136261.14 TPM= 32.52 Transcript Type= NA
chr7	16661243	16706512	16661243	16706512	+	transcript764.chr7.nic@BZW2	transcript764.chr7.nic	protein_coding	16661243,16665437,16674412,16681301,16682780,16685905,16689797,16694834,16696915,16698048,16704547,16706060	16661312,16665501,16674588,16681404,16682845,16686040,16689906,16695004,16697061,16698186,16704669,16706512	Gene ID= ENSG00000136261.14 TPM= 12.34 Transcript Type= NA
chr7	16662133	16706512	16662133	16706512	+	transcript766.chr7.nic@BZW2	transcript766.chr7.nic	protein_coding	16662133,16665437,16674412,16681301,16682780,16685905,16689797,16694834,16696915,16698048,16704547,16706060	16662254,16665501,16674588,16681404,16682845,16686040,16689906,16695004,16697061,16698186,16704669,16706512	Gene ID= ENSG00000136261.14 TPM= 10.22 Transcript Type= NA
chr7	16753535	16784536	16753535	16784536	+	ENST00000262067.4@TSPAN13	ENST00000262067.4	protein_coding	16753535,16776211,16777042,16777798,16779003,16783417	16754030,16776378,16777122,16777911,16779116,16784536	Gene ID= ENSG00000106537.7 TPM= 26.55 Transcript Type= protein_coding
chr7	17286279	17298446	17286279	17298446	-	ENST00000452249.5@AC003075.1	ENST00000452249.5	antisense_RNA	17298352,17295166,17286279	17298446,17295273,17286516	Gene ID= ENSG00000237773.5 TPM= 1.06 Transcript Type= antisense_RNA
chr7	17298622	17346150	17298622	17346150	+	ENST00000242057.8@AHR	ENST00000242057.8	protein_coding	17298622,17309936,17322501,17327759,17329952,17330756,17333912,17334887,17335645,17338986,17342921	17299329,17310123,17322607,17327848,17330075,17330886,17334114,17334996,17335786,17340228,17346150	Gene ID= ENSG00000106546.12 TPM= 4.25 Transcript Type= protein_coding
chr7	17762503	17765794	17762503	17765794	+	transcript784.chr7.nnic@NA	transcript784.chr7.nnic	NA	17762503	17765794	Gene ID= novel_gene_chr7_785 TPM= 3.19 Transcript Type= NA
chr7	17792842	17940503	17792842	17940503	-	transcript792.chr7.nic@SNX13	transcript792.chr7.nic	protein_coding	17940284,17897334,17893332,17891546,17890363,17875669,17875480,17873528,17868407,17850826,17850347,17845595,17839807,17834761,17834052,17830010,17826022,17821509,17816182,17814834,17803419,17801588,17799009,17798690,17796827,17792842	17940503,17897446,17893434,17891635,17890484,17875790,17875581,17873616,17868490,17850964,17850435,17845694,17840000,17834865,17834184,17830047,17826091,17821681,17816289,17814944,17803580,17801659,17799154,17798758,17796939,17794292	Gene ID= ENSG00000071189.21 TPM= 5.31 Transcript Type= NA
chr7	17940503	17942922	17940503	17942922	+	ENST00000625121.1@AC080080.1	ENST00000625121.1	TEC	17940503	17942922	Gene ID= ENSG00000279048.1 TPM= 1.06 Transcript Type= TEC
chr7	18221108	18222582	18221108	18222582	-	transcript805.chr7.nnic@NA	transcript805.chr7.nnic	NA	18221108	18222582	Gene ID= novel_gene_chr7_806 TPM= 2.12 Transcript Type= NA
chr7	18509343	18545917	18509343	18545917	+	transcript815.chr7.nnic@HDAC9	transcript815.chr7.nnic	protein_coding	18509343,18543169,18544881	18509446,18543285,18545917	Gene ID= ENSG00000048052.21 TPM= 2.12 Transcript Type= NA
chr7	18495746	18668837	18495746	18668837	+	ENST00000622668.4@HDAC9	ENST00000622668.4	protein_coding	18495746,18496262,18585281,18590336,18591516,18593908,18634627,18644671,18647785,18648466,18666213	18496023,18496324,18585522,18590486,18591642,18594029,18634742,18644793,18647998,18648683,18668837	Gene ID= ENSG00000048052.21 TPM= 10.09 Transcript Type= protein_coding
chr7	18495746	18668843	18495746	18668843	+	ENST00000405010.7@HDAC9	ENST00000405010.7	protein_coding	18495746,18496262,18585281,18590345,18591516,18593908,18629350,18634627,18644671,18647785,18648466,18666213	18495854,18496324,18585522,18590486,18591642,18594029,18629481,18634742,18644793,18647998,18648683,18668843	Gene ID= ENSG00000048052.21 TPM= 13.28 Transcript Type= protein_coding
chr7	18696475	18703895	18696475	18703895	-	transcript816.chr7.nnic@NA	transcript816.chr7.nnic	NA	18703806,18696475	18703895,18697245	Gene ID= novel_gene_chr7_817 TPM= 2.12 Transcript Type= NA
chr7	19695462	19709087	19695462	19709087	-	ENST00000222567.5@TWISTNB	ENST00000222567.5	protein_coding	19708763,19704779,19700072,19695462	19709087,19704920,19700280,19698727	Gene ID= ENSG00000105849.5 TPM= 7.44 Transcript Type= protein_coding
chr7	20002765	20003247	20002765	20003247	+	ENST00000396599.2@RPL21P75	ENST00000396599.2	processed_pseudogene	20002765	20003247	Gene ID= ENSG00000213860.4 TPM= 19.12 Transcript Type= processed_pseudogene
chr7	21428034	21514822	21428034	21514822	+	ENST00000222584.7@SP4	ENST00000222584.7	protein_coding	21428034,21428677,21429289,21477079,21481924,21511022	21428258,21428792,21430843,21477307,21482123,21514822	Gene ID= ENSG00000105866.13 TPM= 4.25 Transcript Type= protein_coding
chr7	21900901	21946084	21900901	21946084	-	ENST00000406877.7@CDCA7L	ENST00000406877.7	protein_coding	21945781,21916754,21911617,21908130,21906568,21906289,21905506,21904110,21902978,21900901	21946084,21916894,21911754,21908507,21906639,21906456,21905631,21904259,21903114,21902352	Gene ID= ENSG00000164649.19 TPM= 22.31 Transcript Type= protein_coding
chr7	22812971	22822849	22812971	22822849	-	transcript832.chr7.nnic@TOMM7	transcript832.chr7.nnic	protein_coding	22822729,22818000,22812971	22822849,22818048,22813185	Gene ID= ENSG00000196683.10 TPM= 6.37 Transcript Type= NA
chr7	22812628	22822849	22812628	22822849	-	ENST00000463284.2@TOMM7	ENST00000463284.2	protein_coding	22822677,22812628	22822849,22813185	Gene ID= ENSG00000196683.10 TPM= 3.19 Transcript Type= processed_transcript
chr7	22812632	22822851	22812632	22822851	-	ENST00000358435.8@TOMM7	ENST00000358435.8	protein_coding	22822677,22818000,22812632	22822851,22818048,22813185	Gene ID= ENSG00000196683.10 TPM= 3.19 Transcript Type= protein_coding
chr7	22934211	23014129	22934211	23014129	-	ENST00000432176.6@FAM126A	ENST00000432176.6	protein_coding	23013925,22991061,22983944,22978269,22977341,22976693,22976210,22964415,22961235,22960256,22934211	23014129,22991139,22984045,22978448,22977421,22976808,22976305,22964531,22961322,22960415,22946163	Gene ID= ENSG00000122591.11 TPM= 1.06 Transcript Type= protein_coding
chr7	22944509	23014084	22944509	23014084	-	ENST00000409923.5@FAM126A	ENST00000409923.5	protein_coding	23013925,22991061,22983944,22978269,22977341,22976693,22976210,22964415,22961235,22960256,22946952,22944509	23014084,22991139,22984045,22978448,22977421,22976808,22976305,22964531,22961322,22960415,22947247,22946163	Gene ID= ENSG00000122591.11 TPM= 1.06 Transcript Type= protein_coding
chr7	22978164	23014074	22978164	23014074	-	ENST00000409763.1@FAM126A	ENST00000409763.1	protein_coding	23013925,22991061,22983944,22978164	23014074,22991139,22984045,22978448	Gene ID= ENSG00000122591.11 TPM= 1.06 Transcript Type= protein_coding
chr7	23105759	23175388	23105759	23175388	+	transcript849.chr7.nnic@KLHL7	transcript849.chr7.nnic	protein_coding	23105759,23123777,23124688,23125048,23125761,23140769,23143851,23152067,23165698,23167836,23172948,23174015	23106146,23123879,23124781,23125172,23125799,23140944,23144025,23152209,23165938,23168037,23173045,23175388	Gene ID= ENSG00000122550.17 TPM= 6.37 Transcript Type= NA
chr7	23105758	23175302	23105758	23175302	+	ENST00000521082.5@KLHL7	ENST00000521082.5	protein_coding	23105758,23117834,23123777,23124688,23125048,23140769,23143851,23152067,23165698,23167836,23172948,23174015	23106146,23117964,23123879,23124781,23125172,23140944,23144025,23152209,23165938,23168037,23173045,23175302	Gene ID= ENSG00000122550.17 TPM= 9.56 Transcript Type= nonsense_mediated_decay
chr7	23105785	23126045	23105785	23126045	+	ENST00000322275.9@KLHL7	ENST00000322275.9	protein_coding	23105785,23123777,23124688,23125048,23125761	23106146,23123879,23124781,23125172,23126045	Gene ID= ENSG00000122550.17 TPM= 21.24 Transcript Type= protein_coding
chr7	23181827	23201009	23181827	23201009	+	ENST00000258742.9@NUPL2	ENST00000258742.9	protein_coding	23181827,23185070,23187052,23195839,23196680,23199458,23200168	23182206,23185298,23187146,23195915,23196766,23199542,23201009	Gene ID= ENSG00000136243.16 TPM= 15.93 Transcript Type= protein_coding
chr7	23246563	23275108	23246563	23275108	+	ENST00000258733.8@GPNMB	ENST00000258733.8	protein_coding	23246563,23253307,23254169,23256892,23259980,23260456,23266517,23267886,23269967,23273521,23274065	23246927,23253459,23254312,23257065,23260138,23260773,23266615,23267988,23270175,23273614,23275108	Gene ID= ENSG00000136235.15 TPM= 196.5 Transcript Type= protein_coding
chr7	23246709	23258048	23246709	23258048	+	ENST00000409458.3@GPNMB	ENST00000409458.3	protein_coding	23246709,23253307,23254169,23256892	23246927,23253459,23254312,23258048	Gene ID= ENSG00000136235.15 TPM= 78.6 Transcript Type= protein_coding
chr7	23246697	23275107	23246697	23275107	+	ENST00000381990.6@GPNMB	ENST00000381990.6	protein_coding	23246697,23253307,23254169,23256892,23259980,23260456,23266481,23267886,23269967,23273521,23274065	23246927,23253459,23254312,23257065,23260138,23260773,23266615,23267988,23270175,23273614,23275107	Gene ID= ENSG00000136235.15 TPM= 39.3 Transcript Type= protein_coding
chr7	23299200	23311729	23299200	23311729	+	ENST00000466681.1@MALSU1	ENST00000466681.1	protein_coding	23299200,23300839,23307868,23309356	23299608,23301017,23307949,23311729	Gene ID= ENSG00000156928.4 TPM= 44.61 Transcript Type= protein_coding
chr7	23490473	23491364	23490473	23491364	+	ENST00000439199.1@RPS2P32	ENST00000439199.1	processed_pseudogene	23490473	23491364	Gene ID= ENSG00000232818.2 TPM= 13.81 Transcript Type= processed_pseudogene
chr7	23504780	23532041	23504780	23532041	-	ENST00000297071.8@TRA2A	ENST00000297071.8	protein_coding	23531789,23521707,23516363,23512894,23507420,23506138,23505746,23504780	23532041,23521840,23516528,23513082,23507535,23506266,23505813,23505569	Gene ID= ENSG00000164548.10 TPM= 15.93 Transcript Type= protein_coding
chr7	23524695	23531714	23524695	23531714	-	transcript913.chr7.nnic@NA	transcript913.chr7.nnic	NA	23524695	23531714	Gene ID= novel_gene_chr7_914 TPM= 2.12 Transcript Type= NA
chr7	23597379	23644708	23597379	23644708	+	ENST00000307471.7@CCDC126	ENST00000307471.7	protein_coding	23597379,23597967,23611171,23642931	23597605,23598051,23611553,23644708	Gene ID= ENSG00000169193.11 TPM= 11.68 Transcript Type= protein_coding
chr7	23597442	23644707	23597442	23644707	+	ENST00000409765.5@CCDC126	ENST00000409765.5	protein_coding	23597442,23611171,23642931	23597605,23611553,23644707	Gene ID= ENSG00000169193.11 TPM= 3.19 Transcript Type= protein_coding
chr7	23680130	23702650	23680130	23702650	+	ENST00000344962.8@FAM221A	ENST00000344962.8	protein_coding	23680130,23684499,23689269,23691390,23698192,23700786,23702096	23680283,23684672,23689459,23691596,23698299,23700868,23702650	Gene ID= ENSG00000188732.10 TPM= 3.19 Transcript Type= protein_coding
chr7	24698353	24758113	24698353	24758113	-	ENST00000342947.7@DFNA5	ENST00000342947.7	protein_coding	24757707,24749564,24744562,24719047,24717254,24710224,24708127,24706184,24702760,24698353	24758113,24749793,24744754,24719218,24717374,24710388,24708254,24706376,24702833,24699259	Gene ID= ENSG00000105928.13 TPM= 4.25 Transcript Type= protein_coding
chr7	24698381	24757475	24698381	24757475	-	ENST00000409970.5@DFNA5	ENST00000409970.5	protein_coding	24757396,24744562,24719047,24717254,24710224,24708127,24706184,24702760,24698381	24757475,24744754,24719218,24717374,24710388,24708254,24706376,24702833,24699259	Gene ID= ENSG00000105928.13 TPM= 1.06 Transcript Type= protein_coding
chr7	26174153	26175209	26174153	26175209	+	transcript987.chr7.nnic@NA	transcript987.chr7.nnic	NA	26174153	26175209	Gene ID= novel_gene_chr7_988 TPM= 2.12 Transcript Type= NA
chr7	26189927	26200749	26189927	26200749	-	transcript946.chr7.nic@HNRNPA2B1	transcript946.chr7.nic	protein_coding	26200572,26197622,26197315,26196807,26196557,26196401,26195847,26193575,26193251,26192495,26190993,26189927	26200749,26197732,26197461,26197017,26196658,26196481,26195909,26193694,26193373,26192577,26191128,26190460	Gene ID= ENSG00000122566.20 TPM= 7.44 Transcript Type= NA
chr7	26190125	26200746	26190125	26200746	-	ENST00000360787.8@HNRNPA2B1	ENST00000360787.8	protein_coding	26200572,26197831,26197622,26197315,26196807,26196557,26196401,26195847,26193575,26193251,26192495,26190993,26190125	26200746,26197866,26197732,26197461,26197017,26196658,26196481,26195909,26193694,26193373,26192577,26191128,26190460	Gene ID= ENSG00000122566.20 TPM= 6.37 Transcript Type= nonsense_mediated_decay
chr7	26191844	26200746	26191844	26200746	-	ENST00000356674.7@HNRNPA2B1	ENST00000356674.7	protein_coding	26200572,26197622,26197315,26196807,26196557,26196401,26195847,26193575,26193251,26192495,26191844	26200746,26197732,26197461,26197017,26196658,26196481,26195909,26193694,26193373,26192577,26192338	Gene ID= ENSG00000122566.20 TPM= 251.73 Transcript Type= protein_coding
chr7	26201162	26213356	26201162	26213356	+	ENST00000337620.8@CBX3	ENST00000337620.8	protein_coding	26201162,26202971,26206368,26208393,26211662,26212082	26201561,26203022,26206510,26208555,26211756,26213356	Gene ID= ENSG00000122565.18 TPM= 5.66 Transcript Type= protein_coding
chr7	26201648	26203022	26201648	26203022	+	transcript983.chr7.nic@CBX3	transcript983.chr7.nic	protein_coding	26201648,26202971	26201826,26203022	Gene ID= ENSG00000122565.18 TPM= 23.37 Transcript Type= NA
chr7	26201693	26213351	26201693	26213351	+	ENST00000396386.6@CBX3	ENST00000396386.6	protein_coding	26201693,26202971,26206368,26208393,26211662,26212082	26201826,26203022,26206510,26208555,26211756,26213351	Gene ID= ENSG00000122565.18 TPM= 89.57 Transcript Type= protein_coding
chr7	26291923	26374325	26291923	26374325	+	ENST00000338523.8@SNX10	ENST00000338523.8	protein_coding	26291923,26346420,26360975,26364535,26365047,26371821,26372491	26292086,26346466,26361061,26364635,26365145,26372033,26374325	Gene ID= ENSG00000086300.15 TPM= 6.37 Transcript Type= protein_coding
chr7	26667062	26864743	26667062	26864743	-	ENST00000345317.6@SKAP2	ENST00000345317.6	protein_coding	26864363,26854785,26854137,26844030,26739887,26738795,26726882,26725923,26725428,26690285,26684736,26670091,26667062	26864743,26854890,26854162,26844137,26739964,26738878,26727006,26725986,26725565,26690362,26684848,26670192,26669656	Gene ID= ENSG00000005020.12 TPM= 1.06 Transcript Type= protein_coding
chr7	27096178	27099671	27096178	27099671	+	transcript1000.chr7.nnic@NA	transcript1000.chr7.nnic	NA	27096178	27099671	Gene ID= novel_gene_chr7_1001 TPM= 2.12 Transcript Type= NA
chr7	27141052	27143668	27141052	27143668	-	ENST00000222726.3@HOXA5	ENST00000222726.3	protein_coding	27143046,27141052	27143668,27142085	Gene ID= ENSG00000106004.4 TPM= 1.06 Transcript Type= protein_coding
chr7	27525446	27662914	27525446	27662914	-	transcript1007.chr7.nnic@HIBADH	transcript1007.chr7.nnic	protein_coding	27662698,27649473,27632336,27629371,27542967,27538341,27531192,27526141,27525446	27662914,27649633,27632445,27629492,27543100,27538417,27531348,27526372,27525868	Gene ID= ENSG00000106049.8 TPM= 10.62 Transcript Type= NA
chr7	27525442	27662995	27525442	27662995	-	ENST00000265395.6@HIBADH	ENST00000265395.6	protein_coding	27662698,27649473,27632336,27629371,27542967,27538341,27531192,27525442	27662995,27649633,27632445,27629492,27543100,27538417,27531348,27526372	Gene ID= ENSG00000106049.8 TPM= 176.32 Transcript Type= protein_coding
chr7	27740095	27828881	27740095	27828881	+	ENST00000265393.10@TAX1BP1	ENST00000265393.10	protein_coding	27740095,27748518,27758031,27765834,27769676,27785163,27785399,27787418,27792006,27793066,27794323,27796116,27799965,27816349,27816890,27827738,27828628	27740269,27748686,27758133,27766021,27769834,27785311,27785489,27787603,27792230,27793212,27794446,27796219,27800090,27816394,27817038,27827820,27828881	Gene ID= ENSG00000106052.13 TPM= 284.66 Transcript Type= protein_coding
chr7	27740189	27829263	27740189	27829263	+	ENST00000396319.6@TAX1BP1	ENST00000396319.6	protein_coding	27740189,27748518,27758031,27765834,27769676,27785163,27785399,27787418,27792006,27793066,27794323,27796116,27799965,27816349,27816890,27827738,27828628	27740269,27748686,27758133,27766021,27769834,27785311,27785489,27787603,27792230,27793212,27794446,27796219,27800090,27816520,27817038,27827820,27829263	Gene ID= ENSG00000106052.13 TPM= 35.05 Transcript Type= protein_coding
chr7	27830573	28180743	27830573	28180743	-	ENST00000283928.9@JAZF1	ENST00000283928.9	protein_coding	28180463,27991909,27895220,27840698,27830573	28180743,27991981,27895416,27840867,27832976	Gene ID= ENSG00000153814.11 TPM= 40.36 Transcript Type= protein_coding
chr7	28065306	28066625	28065306	28066625	+	transcript1080.chr7.nnic@NA	transcript1080.chr7.nnic	NA	28065306	28066625	Gene ID= novel_gene_chr7_1081 TPM= 7.44 Transcript Type= NA
chr7	28171600	28173904	28171600	28173904	+	transcript1082.chr7.nnic@NA	transcript1082.chr7.nnic	NA	28171600	28173904	Gene ID= novel_gene_chr7_1083 TPM= 28.68 Transcript Type= NA
chr7	28491130	28819637	28491130	28819637	+	ENST00000409603.5@CREB5	ENST00000409603.5	protein_coding	28491130,28494906,28507616,28570365,28718753,28724222,28804199,28809187,28818071,28819116	28491263,28494999,28507737,28570537,28718879,28724332,28804522,28809414,28818179,28819637	Gene ID= ENSG00000146592.16 TPM= 1.59 Transcript Type= protein_coding
chr7	28685981	28820000	28685981	28820000	+	ENST00000396298.6@CREB5	ENST00000396298.6	protein_coding	28685981,28718753,28724222,28804199,28809187,28818071,28819116	28686197,28718879,28724332,28804522,28809414,28818179,28820000	Gene ID= ENSG00000146592.16 TPM= 1.59 Transcript Type= protein_coding
chr7	28409376	28410753	28409376	28410753	+	ENST00000482692.1@CREB5	ENST00000482692.1	protein_coding	28409376,28409658	28409423,28410753	Gene ID= ENSG00000146592.16 TPM= 5.84 Transcript Type= processed_transcript
chr7	28409482	28410750	28409482	28410750	+	transcript1096.chr7.nnic@CREB5	transcript1096.chr7.nnic	protein_coding	28409482,28409896	28409735,28410750	Gene ID= ENSG00000146592.16 TPM= 10.09 Transcript Type= NA
chr7	28435093	28440209	28435093	28440209	-	transcript1100.chr7.nnic@NA	transcript1100.chr7.nnic	NA	28435093	28440209	Gene ID= novel_gene_chr7_1101 TPM= 3.19 Transcript Type= NA
chr7	28732845	28733478	28732845	28733478	-	transcript1102.chr7.nnic@NA	transcript1102.chr7.nnic	NA	28732845	28733478	Gene ID= novel_gene_chr7_1103 TPM= 2.12 Transcript Type= NA
chr7	28954305	28958309	28954305	28958309	-	transcript1104.chr7.nnic@NA	transcript1104.chr7.nnic	NA	28954305	28958309	Gene ID= novel_gene_chr7_1105 TPM= 3.19 Transcript Type= NA
chr7	28995631	29146497	28995631	29146497	-	ENST00000396276.7@CPVL	ENST00000396276.7	protein_coding	29146341,29120893,29112704,29096103,29095084,29092623,29086484,29072301,29071773,29066023,29064061,29030577,28995631	29146497,29121071,29112822,29096217,29095142,29092702,29086550,29072423,29071904,29066121,29064234,29030759,28995882	Gene ID= ENSG00000106066.14 TPM= 15.22 Transcript Type= protein_coding
chr7	28995634	29146537	28995634	29146537	-	transcript1119.chr7.nic@CPVL	transcript1119.chr7.nic	protein_coding	29146429,29120893,29112704,29096103,29095084,29092623,29086484,29072301,29071773,29030577,28995634	29146537,29121071,29112822,29096217,29095142,29092702,29086550,29072423,29071904,29030759,28995882	Gene ID= ENSG00000106066.14 TPM= 6.72 Transcript Type= NA
chr7	28995231	29146537	28995231	29146537	-	ENST00000265394.9@CPVL	ENST00000265394.9	protein_coding	29146429,29120893,29112704,29096103,29095084,29092623,29086484,29072301,29071773,29066023,29064061,29030577,28995231	29146537,29121071,29112822,29096217,29095142,29092702,29086550,29072423,29071904,29066121,29064234,29030759,28995882	Gene ID= ENSG00000106066.14 TPM= 5.31 Transcript Type= protein_coding
chr7	29146568	29514328	29146568	29514328	+	transcript1106.chr7.nnic@CHN2	transcript1106.chr7.nnic	protein_coding	29146568,29146849,29292848,29293570,29354625,29367932,29393679,29398373,29400543,29480279,29495952,29499867,29504744,29507228,29509301,29512564	29146745,29146960,29292963,29293608,29354663,29367987,29393710,29398486,29400828,29480356,29496036,29500040,29504821,29507365,29509406,29514328	Gene ID= ENSG00000106069.21 TPM= 3.19 Transcript Type= NA
chr7	29146568	29514328	29146568	29514328	+	transcript1108.chr7.nnic@CHN2	transcript1108.chr7.nnic	protein_coding	29146568,29146849,29292925,29354625,29367932,29393679,29398373,29400543,29480279,29495952,29499867,29504744,29507228,29509301,29512564	29146745,29146960,29292963,29354663,29367987,29393710,29398486,29400828,29480356,29496036,29500040,29504821,29507365,29509406,29514328	Gene ID= ENSG00000106069.21 TPM= 4.25 Transcript Type= NA
chr7	29194412	29514328	29194412	29514328	+	ENST00000222792.10@CHN2	ENST00000222792.10	protein_coding	29194412,29354625,29367932,29393679,29398373,29400543,29480279,29495952,29499867,29504744,29507228,29509301,29512564	29194990,29354663,29367987,29393710,29398486,29400828,29480356,29496036,29500040,29504821,29507365,29509406,29514328	Gene ID= ENSG00000106069.21 TPM= 2.12 Transcript Type= protein_coding
chr7	29146589	29148657	29146589	29148657	+	ENST00000461824.1@CHN2	ENST00000461824.1	protein_coding	29146589,29146849,29148502	29146745,29146960,29148657	Gene ID= ENSG00000106069.21 TPM= 1.06 Transcript Type= processed_transcript
chr7	29149191	29152904	29149191	29152904	-	transcript1131.chr7.nnic@NA	transcript1131.chr7.nnic	NA	29149191	29152904	Gene ID= novel_gene_chr7_1132 TPM= 27.62 Transcript Type= NA
chr7	29405687	29408199	29405687	29408199	+	transcript1129.chr7.nnic@NA	transcript1129.chr7.nnic	NA	29405687	29408199	Gene ID= novel_gene_chr7_1130 TPM= 3.19 Transcript Type= NA
chr7	29563811	29567295	29563811	29567295	+	ENST00000319694.2@PRR15	ENST00000319694.2	protein_coding	29563811,29566185	29564377,29567295	Gene ID= ENSG00000176532.3 TPM= 3.19 Transcript Type= protein_coding
chr7	29645916	29650214	29645916	29650214	-	transcript1134.chr7.nnic@NA	transcript1134.chr7.nnic	NA	29645916	29650214	Gene ID= novel_gene_chr7_1135 TPM= 15.93 Transcript Type= NA
chr7	29888081	29917066	29888081	29917066	+	transcript1138.chr7.nic@WIPF3	transcript1138.chr7.nic	protein_coding	29888081,29889306,29904286,29914493	29888217,29889407,29904362,29917066	Gene ID= ENSG00000122574.10 TPM= 48.86 Transcript Type= NA
chr7	29920103	29989798	29920103	29989798	-	ENST00000242059.9@SCRN1	ENST00000242059.9	protein_coding	29989642,29968909,29955179,29943977,29940682,29936556,29926452,29920103	29989798,29969068,29955360,29944179,29940876,29936721,29926632,29924115	Gene ID= ENSG00000136193.16 TPM= 26.55 Transcript Type= protein_coding
chr7	30010587	30026684	30010587	30026684	-	ENST00000222803.9@FKBP14	ENST00000222803.9	protein_coding	30026312,30022665,30018996,30010587	30026684,30022816,30019123,30014893	Gene ID= ENSG00000106080.10 TPM= 7.44 Transcript Type= protein_coding
chr7	30028361	30118345	30028361	30118345	+	ENST00000622102.4@PLEKHA8	ENST00000622102.4	protein_coding	30028361,30045085,30046210,30047832,30049224,30050434,30052709,30054709,30055257,30060884,30061897,30062672,30074071,30117970	30028802,30045201,30046365,30047956,30049382,30050474,30052866,30054865,30055342,30060942,30062027,30062742,30074132,30118345	Gene ID= ENSG00000106086.18 TPM= 2.12 Transcript Type= protein_coding
chr7	30134820	30162760	30134820	30162760	+	transcript1161.chr7.nic@MTURN	transcript1161.chr7.nic	protein_coding	30134820,30146177,30157438,30158986	30135298,30146299,30157595,30162760	Gene ID= ENSG00000180354.15 TPM= 9.56 Transcript Type= NA
chr7	30284307	30367692	30284307	30367692	+	ENST00000323037.4@ZNRF2	ENST00000323037.4	protein_coding	30284307,30323642,30355728,30362377,30366035	30285826,30323737,30355833,30362456,30367692	Gene ID= ENSG00000180233.10 TPM= 10.62 Transcript Type= protein_coding
chr7	30284629	30367295	30284629	30367295	+	transcript1179.chr7.nnic@ZNRF2	transcript1179.chr7.nnic	protein_coding	30284629,30323642,30355728,30366035	30285826,30323737,30355833,30367295	Gene ID= ENSG00000180233.10 TPM= 3.19 Transcript Type= NA
chr7	30424527	30478780	30424527	30478780	-	ENST00000222823.8@NOD1	ENST00000222823.8	protein_coding	30478606,30459901,30459152,30456721,30455137,30451216,30448298,30446967,30446141,30437573,30435998,30433096,30429374,30424527	30478780,30460041,30459240,30457042,30455311,30453040,30448381,30447050,30446224,30437656,30436081,30433179,30429457,30425710	Gene ID= ENSG00000106100.10 TPM= 7.44 Transcript Type= protein_coding
chr7	30496621	30504844	30496621	30504844	-	ENST00000275428.8@GGCT	ENST00000275428.8	protein_coding	30504569,30500536,30498803,30496621	30504844,30500681,30498938,30497235	Gene ID= ENSG00000006625.17 TPM= 8.5 Transcript Type= protein_coding
chr7	30496621	30504829	30496621	30504829	-	ENST00000440082.5@GGCT	ENST00000440082.5	protein_coding	30504569,30498803,30496621	30504829,30498938,30497235	Gene ID= ENSG00000006625.17 TPM= 11.68 Transcript Type= nonsense_mediated_decay
chr7	30578497	30586873	30578497	30586873	-	transcript1210.chr7.nic@AC005154.1	transcript1210.chr7.nic	processed_transcript	30585330,30579231,30578497	30586873,30579314,30579128	Gene ID= ENSG00000196295.11 TPM= 2.12 Transcript Type= NA
chr7	30587400	30590872	30587400	30590872	+	transcript1212.chr7.nnic@NA	transcript1212.chr7.nnic	NA	30587400	30590872	Gene ID= novel_gene_chr7_1213 TPM= 3.19 Transcript Type= NA
chr7	30594681	30634033	30594681	30634033	+	ENST00000389266.7@GARS	ENST00000389266.7	protein_coding	30594681,30598796,30599947,30601059,30603034,30603496,30609585,30612096,30615896,30617114,30621393,30622317,30626234,30628560,30631448,30632247,30633735	30595143,30598897,30600049,30601200,30603122,30603572,30609730,30612245,30616058,30617278,30621500,30622462,30626319,30628669,30631541,30632437,30634033	Gene ID= ENSG00000106105.13 TPM= 101.97 Transcript Type= protein_coding
chr7	30752135	30757602	30752135	30757602	+	ENST00000013222.5@INMT	ENST00000013222.5	protein_coding	30752135,30753731,30755422	30752304,30753938,30757602	Gene ID= ENSG00000241644.2 TPM= 6.37 Transcript Type= protein_coding
chr7	30911694	30925516	30911694	30925516	+	ENST00000311813.9@AQP1	ENST00000311813.9	protein_coding	30911694,30922066,30922564,30923450	30912293,30922230,30922644,30925516	Gene ID= ENSG00000240583.11 TPM= 220.93 Transcript Type= protein_coding
chr7	31616778	32070893	31616778	32070893	-	transcript1223.chr7.nnic@PDE1C	transcript1223.chr7.nnic	protein_coding	32070293,32051554,31880747,31878996,31877970,31873292,31864942,31850641,31847968,31837870,31837180,31828292,31824867,31823073,31815924,31809031,31775664,31710993,31629672,31616778	32070893,32051580,31880860,31879178,31878036,31873408,31865082,31850741,31848096,31837971,31837300,31828373,31824987,31823248,31816154,31809108,31775732,31711087,31629839,31617177	Gene ID= ENSG00000154678.16 TPM= 6.37 Transcript Type= NA
chr7	31847729	32070726	31847729	32070726	-	transcript1261.chr7.nnic@PDE1C	transcript1261.chr7.nnic	protein_coding	32070293,32051554,31880747,31878996,31877970,31873292,31864942,31850641,31847968,31847729	32070726,32051580,31880860,31879178,31878036,31873408,31865082,31850741,31848096,31847773	Gene ID= ENSG00000154678.16 TPM= 5.31 Transcript Type= NA
chr7	31846224	32070904	31846224	32070904	-	transcript1262.chr7.nic@PDE1C	transcript1262.chr7.nic	protein_coding	32070293,32051554,31880747,31878996,31877970,31873292,31864942,31850641,31846224	32070904,32051580,31880860,31879178,31878036,31873408,31865082,31850741,31848096	Gene ID= ENSG00000154678.16 TPM= 5.31 Transcript Type= NA
chr7	32051444	32071001	32051444	32071001	-	transcript1267.chr7.nic@PDE1C	transcript1267.chr7.nic	protein_coding	32070293,32051444	32071001,32051580	Gene ID= ENSG00000154678.16 TPM= 5.31 Transcript Type= NA
chr7	31790200	32070862	31790200	32070862	-	ENST00000396182.6@PDE1C	ENST00000396182.6	protein_coding	32070293,32051554,31880747,31878996,31877970,31873292,31864942,31850641,31847968,31837870,31837180,31828292,31824867,31823073,31815924,31809031,31790200	32070862,32051580,31880860,31879178,31878036,31873408,31865082,31850741,31848096,31837971,31837300,31828373,31824987,31823248,31816154,31809108,31790259	Gene ID= ENSG00000154678.16 TPM= 6.37 Transcript Type= protein_coding
chr7	31786787	31788542	31786787	31788542	-	transcript1280.chr7.nnic@NA	transcript1280.chr7.nnic	NA	31786787	31788542	Gene ID= novel_gene_chr7_1281 TPM= 2.12 Transcript Type= NA
chr7	31945869	31949572	31945869	31949572	-	transcript1282.chr7.nnic@NA	transcript1282.chr7.nnic	NA	31945869	31949572	Gene ID= novel_gene_chr7_1283 TPM= 2.12 Transcript Type= NA
chr7	31952255	31957387	31952255	31957387	-	transcript1278.chr7.nnic@NA	transcript1278.chr7.nnic	NA	31952255	31957387	Gene ID= novel_gene_chr7_1279 TPM= 2.12 Transcript Type= NA
chr7	31982551	31985584	31982551	31985584	-	transcript1276.chr7.nnic@NA	transcript1276.chr7.nnic	NA	31982551	31985584	Gene ID= novel_gene_chr7_1277 TPM= 3.19 Transcript Type= NA
chr7	31998010	32000664	31998010	32000664	-	transcript1284.chr7.nnic@NA	transcript1284.chr7.nnic	NA	31998010	32000664	Gene ID= novel_gene_chr7_1285 TPM= 3.19 Transcript Type= NA
chr7	32001028	32005404	32001028	32005404	+	transcript1274.chr7.nnic@NA	transcript1274.chr7.nnic	NA	32001028	32005404	Gene ID= novel_gene_chr7_1275 TPM= 2.12 Transcript Type= NA
chr7	32016660	32019169	32016660	32019169	+	transcript1270.chr7.nnic@NA	transcript1270.chr7.nnic	NA	32016660	32019169	Gene ID= novel_gene_chr7_1271 TPM= 20.18 Transcript Type= NA
chr7	32022522	32027591	32022522	32027591	+	transcript1268.chr7.nnic@NA	transcript1268.chr7.nnic	NA	32022522	32027591	Gene ID= novel_gene_chr7_1269 TPM= 10.62 Transcript Type= NA
chr7	32271449	32275307	32271449	32275307	+	transcript1286.chr7.nnic@NA	transcript1286.chr7.nnic	NA	32271449	32275307	Gene ID= novel_gene_chr7_1287 TPM= 2.12 Transcript Type= NA
chr7	32485332	32490418	32485332	32490418	-	ENST00000450169.6@LSM5	ENST00000450169.6	protein_coding	32490320,32489249,32488625,32487685,32485332	32490418,32489344,32488652,32487757,32487293	Gene ID= ENSG00000106355.9 TPM= 5.31 Transcript Type= protein_coding
chr7	32486805	32495283	32486805	32495283	-	ENST00000409909.7@LSM5	ENST00000409909.7	protein_coding	32495230,32489249,32488625,32487685,32486805	32495283,32489344,32488652,32487757,32487293	Gene ID= ENSG00000106355.9 TPM= 1.06 Transcript Type= protein_coding
chr7	32487035	32490361	32487035	32490361	-	ENST00000410044.5@LSM5	ENST00000410044.5	protein_coding	32490131,32489249,32488625,32487685,32487035	32490361,32489344,32488652,32487757,32487293	Gene ID= ENSG00000106355.9 TPM= 1.06 Transcript Type= protein_coding
chr7	32495489	32588721	32495489	32588721	+	ENST00000318709.8@AVL9	ENST00000318709.8	protein_coding	32495489,32543141,32544694,32548847,32551334,32552229,32553727,32554558,32558559,32558929,32570020,32573199,32575955,32580219,32580802,32583792	32495802,32543261,32544779,32548918,32551423,32552295,32553767,32554596,32558628,32559464,32570154,32573418,32576072,32580272,32580890,32588721	Gene ID= ENSG00000105778.18 TPM= 3.19 Transcript Type= protein_coding
chr7	32495498	32496942	32495498	32496942	+	transcript1317.chr7.nnic@NA	transcript1317.chr7.nnic	NA	32495498	32496942	Gene ID= novel_gene_chr7_1318 TPM= 3.19 Transcript Type= NA
chr7	32600792	32601778	32600792	32601778	+	transcript1319.chr7.nnic@NA	transcript1319.chr7.nnic	NA	32600792	32601778	Gene ID= novel_gene_chr7_1320 TPM= 2.12 Transcript Type= NA
chr7	32728132	32754804	32728132	32754804	+	transcript1311.chr7.nnic@ZNRF2P1	transcript1311.chr7.nnic	processed_pseudogene	32728132,32751394,32753206	32729009,32751473,32754804	Gene ID= ENSG00000237004.3 TPM= 26.55 Transcript Type= NA
chr7	32756488	32759369	32756488	32759369	+	transcript1321.chr7.nnic@NA	transcript1321.chr7.nnic	NA	32756488	32759369	Gene ID= novel_gene_chr7_1322 TPM= 3.19 Transcript Type= NA
chr7	32868172	32891897	32868172	32891897	-	ENST00000304056.8@KBTBD2	ENST00000304056.8	protein_coding	32891536,32879435,32874992,32868172	32891897,32879942,32875157,32870880	Gene ID= ENSG00000170852.10 TPM= 18.06 Transcript Type= protein_coding
chr7	32868172	32891711	32868172	32891711	-	transcript1332.chr7.nic@KBTBD2	transcript1332.chr7.nic	protein_coding	32891536,32879701,32874992,32868172	32891711,32879942,32875157,32870880	Gene ID= ENSG00000170852.10 TPM= 5.31 Transcript Type= NA
chr7	32916815	32943148	32916815	32943148	-	transcript1347.chr7.nic@RP9P	transcript1347.chr7.nic	transcribed_unprocessed_pseudogene	32942870,32930078,32921339,32918311,32916815	32943148,32930108,32921430,32918372,32917542	Gene ID= ENSG00000205763.13 TPM= 2.12 Transcript Type= NA
chr7	32916815	32943176	32916815	32943176	-	ENST00000381639.3@RP9P	ENST00000381639.3	transcribed_unprocessed_pseudogene	32942870,32933814,32930078,32921339,32918311,32916815	32943176,32933896,32930108,32921430,32918372,32917542	Gene ID= ENSG00000205763.13 TPM= 5.31 Transcript Type= processed_transcript
chr7	32957405	33006931	32957405	33006931	+	ENST00000242209.8@FKBP9	ENST00000242209.8	protein_coding	32957405,32974617,32975182,32976354,32980364,32988507,32996163,33000115,33002676,33005175	32957794,32974762,32975371,32976499,32980553,32988652,32996349,33000260,33002839,33006931	Gene ID= ENSG00000122642.10 TPM= 239.41 Transcript Type= protein_coding
chr7	32999477	33001184	32999477	33001184	-	transcript1363.chr7.nnic@NA	transcript1363.chr7.nnic	NA	32999477	33001184	Gene ID= novel_gene_chr7_1364 TPM= 5.31 Transcript Type= NA
chr7	33014114	33041165	33014114	33041165	-	ENST00000381626.6@NT5C3A	ENST00000381626.6	protein_coding	33040872,33035934,33029629,33026817,33024039,33022053,33021272,33019635,33017439,33015670,33014114	33041165,33035988,33029714,33026915,33024108,33022099,33021357,33019724,33017601,33015870,33014831	Gene ID= ENSG00000122643.18 TPM= 1.06 Transcript Type= protein_coding
chr7	33094797	33109390	33094797	33109390	-	ENST00000297157.7@RP9	ENST00000297157.7	protein_coding	33109221,33100531,33099307,33097271,33096493,33094797	33109390,33100561,33099436,33097362,33096554,33095432	Gene ID= ENSG00000164610.8 TPM= 39.3 Transcript Type= protein_coding
chr7	33129532	33606068	33129532	33606068	+	ENST00000242067.10@BBS9	ENST00000242067.10	protein_coding	33129532,33146242,33152701,33155638,33177478,33257236,33264290,33273012,33273827,33336441,33340897,33344581,33349068,33351219,33352859,33357855,33367767,33383666,33387992,33505463,33533954,33604865,33605195	33130041,33146364,33152851,33155702,33177591,33257410,33264374,33273195,33273956,33336622,33340973,33344634,33349170,33351323,33352873,33357995,33367862,33383838,33388144,33505645,33534176,33604975,33606068	Gene ID= ENSG00000122507.20 TPM= 4.25 Transcript Type= protein_coding
chr7	33554877	33605632	33554877	33605632	+	transcript1384.chr7.nnic@BBS9	transcript1384.chr7.nnic	protein_coding	33554877,33604865,33605195	33554984,33604975,33605632	Gene ID= ENSG00000122507.20 TPM= 4.25 Transcript Type= NA
chr7	34928876	35037525	34928876	35037525	-	ENST00000638088.1@DPY19L1	ENST00000638088.1	protein_coding	35037097,35018572,35017882,35013568,35011330,35010468,34989884,34973514,34969433,34966894,34957984,34955308,34954698,34949797,34947630,34945667,34942615,34941765,34940153,34939276,34937994,34928876	35037525,35018596,35017969,35013705,35011450,35010561,34989941,34973605,34969532,34966971,34958070,34955367,34954778,34949898,34947701,34945716,34942639,34941884,34940327,34939375,34938119,34931729	Gene ID= ENSG00000173852.14 TPM= 8.5 Transcript Type= protein_coding
chr7	35109553	35185942	35109553	35185942	-	transcript1394.chr7.nnic@DPY19L2P1	transcript1394.chr7.nnic	transcribed_unprocessed_pseudogene	35185720,35179018,35162001,35150088,35147791,35144991,35141882,35141033,35132310,35123998,35121507,35119649,35117748,35109553	35185942,35179155,35162094,35150274,35147882,35145090,35141959,35141119,35132369,35124078,35121608,35119720,35117794,35111305	Gene ID= ENSG00000189212.12 TPM= 4.78 Transcript Type= NA
chr7	35120661	35186391	35120661	35186391	-	transcript1401.chr7.nnic@DPY19L2P1	transcript1401.chr7.nnic	transcribed_unprocessed_pseudogene	35185720,35179018,35162001,35150217,35147791,35144991,35141882,35141033,35132310,35123998,35120661	35186391,35179155,35162094,35150274,35147882,35145090,35141959,35141119,35132369,35124078,35121608	Gene ID= ENSG00000189212.12 TPM= 3.19 Transcript Type= NA
chr7	35081817	35084018	35081817	35084018	-	transcript1410.chr7.nnic@NA	transcript1410.chr7.nnic	NA	35081817	35084018	Gene ID= novel_gene_chr7_1411 TPM= 2.12 Transcript Type= NA
chr7	35109275	35113168	35109275	35113168	+	transcript1406.chr7.nnic@NA	transcript1406.chr7.nnic	NA	35109275	35113168	Gene ID= novel_gene_chr7_1407 TPM= 24.96 Transcript Type= NA
chr7	35183843	35186880	35183843	35186880	-	transcript1408.chr7.nnic@NA	transcript1408.chr7.nnic	NA	35183843	35186880	Gene ID= novel_gene_chr7_1409 TPM= 4.25 Transcript Type= NA
chr7	35198131	35199207	35198131	35199207	+	transcript1412.chr7.nnic@NA	transcript1412.chr7.nnic	NA	35198131	35199207	Gene ID= novel_gene_chr7_1413 TPM= 303.78 Transcript Type= NA
chr7	35223209	35226419	35223209	35226419	+	transcript1417.chr7.nnic@NA	transcript1417.chr7.nnic	NA	35223209	35226419	Gene ID= novel_gene_chr7_1418 TPM= 4.25 Transcript Type= NA
chr7	35258527	35260113	35258527	35260113	+	transcript1419.chr7.nnic@NA	transcript1419.chr7.nnic	NA	35258527	35260113	Gene ID= novel_gene_chr7_1420 TPM= 2.12 Transcript Type= NA
chr7	35632659	35695135	35632659	35695135	-	ENST00000396081.5@HERPUD2	ENST00000396081.5	protein_coding	35694184,35673201,35670215,35667434,35638350,35635135,35634312,35632659	35695135,35673278,35670328,35667588,35638472,35635458,35634429,35633851	Gene ID= ENSG00000122557.9 TPM= 13.81 Transcript Type= protein_coding
chr7	35633069	35636961	35633069	35636961	-	transcript1429.chr7.nic@HERPUD2	transcript1429.chr7.nic	protein_coding	35634312,35633069	35636961,35633851	Gene ID= ENSG00000122557.9 TPM= 2.12 Transcript Type= NA
chr7	35692947	35695067	35692947	35695067	-	transcript1431.chr7.nnic@NA	transcript1431.chr7.nnic	NA	35692947	35695067	Gene ID= novel_gene_chr7_1432 TPM= 2.12 Transcript Type= NA
chr7	35695205	35698184	35695205	35698184	+	transcript1433.chr7.nnic@NA	transcript1433.chr7.nnic	NA	35695205	35698184	Gene ID= novel_gene_chr7_1434 TPM= 5.31 Transcript Type= NA
chr7	35800932	35907105	35800932	35907105	+	ENST00000399034.7@SEPT7	ENST00000399034.7	protein_coding	35800932,35832798,35863552,35872666,35873641,35879823,35882484,35883891,35885828,35890668,35898248,35903076,35904254	35801270,35832900,35863658,35872766,35873775,35879940,35882576,35883987,35885879,35890793,35898383,35903215,35907105	Gene ID= ENSG00000122545.18 TPM= 1.06 Transcript Type= protein_coding
chr7	35801219	35904385	35801219	35904385	+	ENST00000635175.1@SEPT7	ENST00000635175.1	protein_coding	35801219,35831425,35832798,35863552,35872666,35873641,35879823,35882484,35883891,35885828,35890668,35898248,35903076,35904254	35801270,35831496,35832900,35863658,35872766,35873775,35879940,35882576,35883987,35885879,35890793,35898383,35903215,35904385	Gene ID= ENSG00000122545.18 TPM= 1.06 Transcript Type= nonsense_mediated_decay
chr7	35801216	35879910	35801216	35879910	+	ENST00000634600.1@SEPT7	ENST00000634600.1	protein_coding	35801216,35832804,35863552,35872666,35873641,35879823	35801270,35832900,35863658,35872766,35873775,35879910	Gene ID= ENSG00000122545.18 TPM= 2.12 Transcript Type= protein_coding
chr7	36153149	36301543	36153149	36301543	+	ENST00000242108.8@EEPD1	ENST00000242108.8	protein_coding	36153149,36154133,36238985,36281115,36284686,36287639,36296993,36299007	36153674,36155202,36239036,36281225,36284820,36287777,36297187,36301543	Gene ID= ENSG00000122547.10 TPM= 8.5 Transcript Type= protein_coding
chr7	36854361	37449249	36854361	37449249	-	ENST00000310758.8@ELMO1	ENST00000310758.8	protein_coding	37448675,37342613,37315920,37314850,37271832,37259181,37244356,37233095,37224879,37222615,37216645,37213335,37211386,37133130,37096619,37013299,36894854,36887560,36878010,36870393,36861659,36854361	37449249,37342763,37315960,37314922,37271882,37259350,37244391,37233194,37225030,37222693,37216695,37213457,37211517,37133234,37096727,37013435,36895017,36887672,36878117,36870475,36861736,36855751	Gene ID= ENSG00000155849.15 TPM= 5.31 Transcript Type= protein_coding
chr7	37200246	37202919	37200246	37202919	-	transcript1473.chr7.nnic@NA	transcript1473.chr7.nnic	NA	37200246	37202919	Gene ID= novel_gene_chr7_1474 TPM= 2.12 Transcript Type= NA
chr7	37920561	37951941	37920561	37951941	+	ENST00000199448.8@EPDR1	ENST00000199448.8	protein_coding	37920561,37948840,37950200	37921208,37949048,37951941	Gene ID= ENSG00000086289.11 TPM= 72.23 Transcript Type= protein_coding
chr7	38178222	38230671	38178222	38230671	+	ENST00000009041.11@STARD3NL	ENST00000009041.11	protein_coding	38178222,38207447,38214357,38215028,38217025,38217188,38219565,38228799,38229923	38178420,38207729,38214434,38215105,38217078,38217305,38219660,38228871,38230671	Gene ID= ENSG00000010270.13 TPM= 32.93 Transcript Type= protein_coding
chr7	38178351	38230381	38178351	38230381	+	ENST00000396013.5@STARD3NL	ENST00000396013.5	protein_coding	38178351,38179090,38207447,38214357,38215028,38217025,38217188,38219565,38228799,38229923	38178420,38179145,38207729,38214434,38215105,38217078,38217305,38219660,38228871,38230381	Gene ID= ENSG00000010270.13 TPM= 3.19 Transcript Type= protein_coding
chr7	38383704	38631420	38383704	38631420	-	ENST00000325590.9@AMPH	ENST00000325590.9	protein_coding	38631283,38534931,38503650,38494433,38491050,38476862,38475331,38466173,38465467,38462975,38461283,38436272,38432189,38429842,38426954,38422421,38394005,38391748,38389804,38383704	38631420,38535011,38503704,38494527,38491145,38476969,38475416,38466248,38465549,38463113,38461411,38436388,38432212,38429865,38426986,38422477,38394214,38392017,38389905,38384925	Gene ID= ENSG00000078053.16 TPM= 4.25 Transcript Type= protein_coding
chr7	38722963	38909229	38722963	38909229	-	ENST00000310301.8@VPS41	ENST00000310301.8	protein_coding	38909154,38898091,38869146,38862545,38830254,38821203,38817817,38796745,38795465,38789801,38776679,38774115,38772522,38771198,38767537,38765580,38763455,38758354,38756838,38754895,38754702,38752176,38745559,38743402,38741985,38728692,38728542,38726909,38722963	38909229,38898129,38869253,38862622,38830328,38821265,38817882,38796864,38795611,38789867,38776776,38774244,38772637,38771254,38767598,38765661,38763547,38758481,38756982,38754936,38754752,38752313,38745613,38743542,38742121,38728791,38728586,38726988,38726326	Gene ID= ENSG00000006715.15 TPM= 9.56 Transcript Type= protein_coding
chr7	38794500	38909222	38794500	38909222	-	transcript1503.chr7.nic@VPS41	transcript1503.chr7.nic	protein_coding	38909154,38898091,38869146,38862545,38830254,38821203,38817817,38796745,38794500	38909222,38898129,38869253,38862622,38830328,38821265,38817882,38796864,38795611	Gene ID= ENSG00000006715.15 TPM= 2.12 Transcript Type= NA
chr7	38725555	38909174	38725555	38909174	-	ENST00000395969.6@VPS41	ENST00000395969.6	protein_coding	38909154,38898091,38869146,38862545,38821203,38817817,38796745,38795465,38789801,38776679,38774115,38772522,38771198,38767537,38765580,38763455,38758354,38756838,38754895,38754702,38752176,38745559,38743402,38741985,38728692,38728542,38726909,38725555	38909174,38898129,38869253,38862622,38821265,38817882,38796864,38795611,38789867,38776776,38774244,38772637,38771254,38767598,38765661,38763547,38758481,38756982,38754936,38754752,38752313,38745613,38743542,38742121,38728791,38728586,38726988,38726326	Gene ID= ENSG00000006715.15 TPM= 6.37 Transcript Type= protein_coding
chr7	39566376	39572881	39566376	39572881	+	ENST00000223273.6@YAE1D1	ENST00000223273.6	protein_coding	39566376,39570506,39572277	39566547,39570627,39572881	Gene ID= ENSG00000241127.7 TPM= 10.62 Transcript Type= protein_coding
chr7	39623561	39708124	39623561	39708124	+	transcript1511.chr7.nnic@RALA	transcript1511.chr7.nnic	protein_coding	39623561,39665226,39686631,39690382,39696685,39706123	39623825,39665290,39686781,39690590,39696859,39708124	Gene ID= ENSG00000006451.7 TPM= 3.19 Transcript Type= NA
chr7	39623483	39708124	39623483	39708124	+	ENST00000005257.6@RALA	ENST00000005257.6	protein_coding	39623483,39686631,39690382,39696685,39706123	39623825,39686781,39690590,39696859,39708124	Gene ID= ENSG00000006451.7 TPM= 39.3 Transcript Type= protein_coding
chr7	39623886	39690570	39623886	39690570	+	ENST00000436179.1@RALA	ENST00000436179.1	protein_coding	39623886,39686631,39690382	39624427,39686781,39690570	Gene ID= ENSG00000006451.7 TPM= 1.06 Transcript Type= protein_coding
chr7	39624312	39624632	39624312	39624632	-	transcript1519.chr7.nnic@NA	transcript1519.chr7.nnic	NA	39624312	39624632	Gene ID= novel_gene_chr7_1520 TPM= 2.12 Transcript Type= NA
chr7	39949974	40095555	39949974	40095555	+	transcript1525.chr7.nnic@CDK13	transcript1525.chr7.nnic	protein_coding	39949974,39987599,39997494,39999361,40001861,40045836,40047821,40062826,40063023,40078005,40078774,40088126,40092785,40094130	39951852,39988258,39997664,39999500,40002031,40046025,40047877,40062927,40063100,40078121,40078851,40088331,40093237,40095555	Gene ID= ENSG00000065883.14 TPM= 4.78 Transcript Type= NA
chr7	39949974	39997868	39949974	39997868	+	transcript1531.chr7.nic@CDK13	transcript1531.chr7.nic	protein_coding	39949974,39987599,39997494	39951852,39988258,39997868	Gene ID= ENSG00000065883.14 TPM= 4.78 Transcript Type= NA
chr7	41689534	41705718	41689534	41705718	-	transcript1538.chr7.nnic@INHBA	transcript1538.chr7.nnic	protein_coding	41705284,41699987,41689534	41705718,41700517,41690542	Gene ID= ENSG00000122641.10 TPM= 2.12 Transcript Type= NA
chr7	41689534	41700609	41689534	41700609	-	ENST00000442711.1@INHBA	ENST00000442711.1	protein_coding	41699987,41689534	41700609,41690542	Gene ID= ENSG00000122641.10 TPM= 3.19 Transcript Type= protein_coding
chr7	42219854	42238007	42219854	42238007	-	transcript1548.chr7.nnic@GLI3	transcript1548.chr7.nnic	protein_coding	42237784,42223130,42219854	42238007,42223295,42220661	Gene ID= ENSG00000106571.12 TPM= 2.12 Transcript Type= NA
chr7	42916857	42932223	42916857	42932223	-	ENST00000223321.8@PSMA2	ENST00000223321.8	protein_coding	42932118,42927383,42926536,42924675,42923325,42921858,42917778,42916857	42932223,42927459,42926668,42924797,42923406,42921931,42917835,42917690	Gene ID= ENSG00000106588.10 TPM= 37.18 Transcript Type= protein_coding
chr7	42932200	42937857	42932200	42937857	+	ENST00000223324.2@MRPL32	ENST00000223324.2	protein_coding	42932200,42934955,42937322	42932516,42935136,42937857	Gene ID= ENSG00000106591.3 TPM= 49.92 Transcript Type= protein_coding
chr7	42932370	42937857	42932370	42937857	+	transcript1561.chr7.nic@MRPL32	transcript1561.chr7.nic	protein_coding	42932370,42934955	42932516,42937857	Gene ID= ENSG00000106591.3 TPM= 2.12 Transcript Type= NA
chr7	43583542	43625184	43583542	43625184	+	transcript1568.chr7.nnic@STK17A	transcript1568.chr7.nnic	protein_coding	43583542,43595901,43608256,43619597,43623572,43623709,43624518	43583809,43596113,43608400,43619723,43623620,43623888,43625184	Gene ID= ENSG00000164543.5 TPM= 4.25 Transcript Type= NA
chr7	43583109	43610371	43583109	43610371	+	transcript1579.chr7.nic@STK17A	transcript1579.chr7.nic	protein_coding	43583109,43595901,43608256	43583449,43596113,43610371	Gene ID= ENSG00000164543.5 TPM= 3.19 Transcript Type= NA
chr7	43583065	43626786	43583065	43626786	+	ENST00000319357.5@STK17A	ENST00000319357.5	protein_coding	43583065,43595901,43608256,43619597,43623572,43623709,43624518	43583449,43596113,43608400,43619723,43623620,43623888,43626786	Gene ID= ENSG00000164543.5 TPM= 7.44 Transcript Type= protein_coding
chr7	43639257	43729542	43639257	43729542	-	transcript1571.chr7.nic@COA1	transcript1571.chr7.nic	protein_coding	43729429,43665658,43648600,43647535,43645251,43640573,43639257	43729542,43665722,43648652,43647634,43645399,43640649,43639681	Gene ID= ENSG00000106603.18 TPM= 10.27 Transcript Type= NA
chr7	43639257	43729496	43639257	43729496	-	transcript1572.chr7.nic@COA1	transcript1572.chr7.nic	protein_coding	43729429,43711400,43648600,43647535,43645251,43640573,43639257	43729496,43711449,43648652,43647634,43645399,43640649,43639681	Gene ID= ENSG00000106603.18 TPM= 2.84 Transcript Type= NA
chr7	43639247	43729541	43639247	43729541	-	ENST00000223336.10@COA1	ENST00000223336.10	protein_coding	43729429,43648600,43647535,43645251,43640573,43639247	43729541,43648652,43647634,43645399,43640649,43639681	Gene ID= ENSG00000106603.18 TPM= 14.52 Transcript Type= protein_coding
chr7	43758680	43807339	43758680	43807339	+	ENST00000265523.8@BLVRA	ENST00000265523.8	protein_coding	43758680,43771138,43787904,43791249,43792715,43800465,43803676,43806977	43758734,43771170,43788025,43791368,43792812,43800572,43803847,43807339	Gene ID= ENSG00000106605.10 TPM= 88.16 Transcript Type= protein_coding
chr7	43758687	43807342	43758687	43807342	+	ENST00000402924.5@BLVRA	ENST00000402924.5	protein_coding	43758687,43760017,43771138,43787904,43791249,43792715,43800465,43803676,43806977	43758734,43760110,43771170,43788025,43791368,43792812,43800572,43803847,43807342	Gene ID= ENSG00000106605.10 TPM= 10.62 Transcript Type= protein_coding
chr7	43866558	43869557	43866558	43869557	-	ENST00000317534.5@MRPS24	ENST00000317534.5	protein_coding	43869457,43869308,43868963,43866558	43869557,43869376,43869074,43866982	Gene ID= ENSG00000062582.13 TPM= 108.34 Transcript Type= protein_coding
chr7	43866562	43869517	43866562	43869517	-	ENST00000418740.5@MRPS24	ENST00000418740.5	protein_coding	43869308,43868963,43866562	43869517,43869074,43866982	Gene ID= ENSG00000062582.13 TPM= 19.12 Transcript Type= protein_coding
chr7	43875915	43906597	43875915	43906597	-	transcript1599.chr7.nnic@URGCP	transcript1599.chr7.nnic	protein_coding	43906562,43895550,43887790,43887415,43881907,43881659,43875915	43906597,43895667,43887816,43887485,43881957,43881697,43879260	Gene ID= ENSG00000106608.16 TPM= 13.46 Transcript Type= NA
chr7	43875915	43907069	43875915	43907069	-	ENST00000453200.5@URGCP	ENST00000453200.5	protein_coding	43906562,43887790,43887415,43881907,43881659,43875915	43907069,43887816,43887485,43881957,43881697,43879260	Gene ID= ENSG00000106608.16 TPM= 51.7 Transcript Type= protein_coding
chr7	43875913	43906615	43875913	43906615	-	ENST00000402306.7@URGCP	ENST00000402306.7	protein_coding	43906562,43887415,43881907,43881659,43875913	43906615,43887485,43881957,43881697,43879260	Gene ID= ENSG00000106608.16 TPM= 25.14 Transcript Type= protein_coding
chr7	43897334	43898852	43897334	43898852	+	transcript1610.chr7.nnic@NA	transcript1610.chr7.nnic	NA	43897334	43898852	Gene ID= novel_gene_chr7_1611 TPM= 2.12 Transcript Type= NA
chr7	44039489	44042479	44039489	44042479	+	transcript1651.chr7.nnic@LINC00957	transcript1651.chr7.nnic	lincRNA	44039489,44039894,44041654	44039689,44041279,44042479	Gene ID= ENSG00000235314.1 TPM= 3.72 Transcript Type= NA
chr7	44039523	44042306	44039523	44042306	+	ENST00000441052.1@LINC00957	ENST00000441052.1	lincRNA	44039523,44039894	44039699,44042306	Gene ID= ENSG00000235314.1 TPM= 1.59 Transcript Type= lincRNA
chr7	44044634	44061716	44044634	44061716	+	transcript1628.chr7.nnic@DBNL	transcript1628.chr7.nnic	protein_coding	44044634,44050225,44052911,44056757,44057782,44058129,44058432,44058902,44059354,44059543,44060048,44060777	44044820,44050251,44052941,44056903,44057859,44058280,44058480,44058983,44059449,44059658,44060153,44061716	Gene ID= ENSG00000136279.20 TPM= 4.07 Transcript Type= NA
chr7	44044717	44061716	44044717	44061716	+	ENST00000494774.5@DBNL	ENST00000494774.5	protein_coding	44044717,44050225,44051830,44052867,44056757,44057782,44058129,44058429,44058902,44059354,44059543,44060048,44060777	44044820,44050280,44051942,44052941,44056903,44057859,44058280,44058480,44058983,44059449,44059658,44060153,44061716	Gene ID= ENSG00000136279.20 TPM= 26.9 Transcript Type= protein_coding
chr7	44044711	44061637	44044711	44061637	+	ENST00000468694.5@DBNL	ENST00000468694.5	protein_coding	44044711,44050225,44051830,44052867,44056757,44057782,44058129,44058429,44058878,44059354,44059543,44060048,44060777	44044820,44050280,44051942,44052941,44056903,44057859,44058280,44058480,44058983,44059449,44059658,44060153,44061637	Gene ID= ENSG00000136279.20 TPM= 16.99 Transcript Type= protein_coding
chr7	44062727	44065572	44062727	44065572	-	transcript1665.chr7.nnic@PGAM2	transcript1665.chr7.nnic	protein_coding	44065116,44062727	44065572,44062930	Gene ID= ENSG00000164708.5 TPM= 14.87 Transcript Type= NA
chr7	44062727	44065587	44062727	44065587	-	ENST00000297283.3@PGAM2	ENST00000297283.3	protein_coding	44065116,44064832,44062727	44065587,44065012,44062930	Gene ID= ENSG00000164708.5 TPM= 514.09 Transcript Type= protein_coding
chr7	44067079	44069231	44067079	44069231	+	transcript1669.chr7.nnic@NA	transcript1669.chr7.nnic	NA	44067079	44069231	Gene ID= novel_gene_chr7_1670 TPM= 2.12 Transcript Type= NA
chr7	44072247	44082540	44072247	44082540	-	ENST00000242248.9@POLM	ENST00000242248.9	protein_coding	44082251,44080733,44079861,44079571,44078740,44076509,44074398,44074131,44073783,44073625,44072247	44082540,44080916,44079959,44079741,44078811,44076629,44074530,44074233,44074025,44073708,44073377	Gene ID= ENSG00000122678.16 TPM= 11.68 Transcript Type= protein_coding
chr7	44104361	44114560	44104361	44114560	+	ENST00000223357.7@AEBP1	ENST00000223357.7	protein_coding	44104361,44106546,44107439,44107629,44107809,44108007,44108899,44109107,44109288,44110015,44110207,44110725,44110913,44111154,44111507,44111854,44112142,44112558,44112991,44113252,44113594	44104918,44106887,44107510,44107700,44107931,44108084,44108976,44109184,44109341,44110124,44110346,44110809,44111057,44111239,44111630,44112050,44112321,44112909,44113130,44113351,44114560	Gene ID= ENSG00000106624.10 TPM= 95.59 Transcript Type= protein_coding
chr7	44114681	44123559	44114681	44123559	-	ENST00000610533.4@POLD2	ENST00000610533.4	protein_coding	44123511,44121834,44117943,44117619,44117133,44116817,44116430,44116115,44115766,44115295,44114681	44123559,44122109,44118064,44117742,44117247,44117015,44116510,44116272,44115893,44115396,44114945	Gene ID= ENSG00000106628.10 TPM= 128.36 Transcript Type= protein_coding
chr7	44114687	44123548	44114687	44123548	-	transcript1697.chr7.nnic@POLD2	transcript1697.chr7.nnic	protein_coding	44123511,44121834,44117943,44117619,44117133,44116817,44116430,44116115,44115766,44115295,44114687	44123548,44122195,44118064,44117742,44117247,44117015,44116510,44116272,44115893,44115396,44114945	Gene ID= ENSG00000106628.10 TPM= 37.9 Transcript Type= NA
chr7	44138864	44141332	44138864	44141332	-	transcript1708.chr7.nic@MYL7	transcript1708.chr7.nic	protein_coding	44141303,44140961,44140712,44140323,44139782,44139422,44138864	44141332,44141074,44140787,44140427,44139860,44139569,44139022	Gene ID= ENSG00000106631.8 TPM= 22.31 Transcript Type= NA
chr7	44138864	44141346	44138864	44141346	-	transcript1723.chr7.nic@MYL7	transcript1723.chr7.nic	protein_coding	44141303,44140961,44140712,44140323,44139782,44139521,44138864	44141346,44141074,44140856,44140427,44139860,44139569,44139022	Gene ID= ENSG00000106631.8 TPM= 69.51 Transcript Type= NA
chr7	44138864	44141346	44138864	44141346	-	transcript1729.chr7.nic@MYL7	transcript1729.chr7.nic	protein_coding	44141303,44140961,44140712,44140323,44139782,44139521,44138864	44141346,44141074,44140787,44140427,44139860,44139664,44139022	Gene ID= ENSG00000106631.8 TPM= 25.83 Transcript Type= NA
chr7	44138864	44141533	44138864	44141533	-	transcript1736.chr7.nic@MYL7	transcript1736.chr7.nic	protein_coding	44141303,44140961,44140323,44139782,44139521,44138864	44141533,44141074,44140787,44139860,44139569,44139022	Gene ID= ENSG00000106631.8 TPM= 42.85 Transcript Type= NA
chr7	44138864	44141378	44138864	44141378	-	transcript1739.chr7.nnic@MYL7	transcript1739.chr7.nnic	protein_coding	44141303,44140961,44140712,44140323,44139782,44138864	44141378,44141074,44140787,44140427,44139860,44139022	Gene ID= ENSG00000106631.8 TPM= 34.34 Transcript Type= NA
chr7	44138864	44141332	44138864	44141332	-	transcript1746.chr7.nic@MYL7	transcript1746.chr7.nic	protein_coding	44141303,44140961,44140323,44138864	44141332,44141074,44140787,44139860	Gene ID= ENSG00000106631.8 TPM= 39.3 Transcript Type= NA
chr7	44138864	44141332	44138864	44141332	-	ENST00000223364.7@MYL7	ENST00000223364.7	protein_coding	44141303,44140961,44140712,44140323,44139782,44139521,44138864	44141332,44141074,44140787,44140427,44139860,44139569,44139022	Gene ID= ENSG00000106631.8 TPM= 501.65 Transcript Type= protein_coding
chr7	44138869	44141074	44138869	44141074	-	ENST00000457314.5@MYL7	ENST00000457314.5	protein_coding	44140961,44140712,44140323,44139782,44139521,44138869	44141074,44140856,44140427,44139860,44139569,44139022	Gene ID= ENSG00000106631.8 TPM= 26.12 Transcript Type= protein_coding
chr7	44138866	44141285	44138866	44141285	-	ENST00000458240.5@MYL7	ENST00000458240.5	protein_coding	44140961,44140712,44140323,44139782,44139521,44138866	44141285,44140787,44140427,44139860,44139569,44139022	Gene ID= ENSG00000106631.8 TPM= 39.24 Transcript Type= protein_coding
chr7	44138869	44141036	44138869	44141036	-	ENST00000434895.5@MYL7	ENST00000434895.5	protein_coding	44140961,44140712,44140323,44139782,44139521,44138869	44141036,44140787,44140427,44139860,44139664,44139022	Gene ID= ENSG00000106631.8 TPM= 12.4 Transcript Type= processed_transcript
chr7	44138864	44140401	44138864	44140401	-	ENST00000446581.5@MYL7	ENST00000446581.5	protein_coding	44140323,44139782,44139422,44138864	44140401,44139860,44139569,44139022	Gene ID= ENSG00000106631.8 TPM= 4.35 Transcript Type= protein_coding
chr7	44144275	44146144	44144275	44146144	-	ENST00000336642.8@GCK	ENST00000336642.8	protein_coding	44146074,44145497,44144275	44146144,44145730,44145280	Gene ID= ENSG00000106633.15 TPM= 16.46 Transcript Type= protein_coding
chr7	44144273	44146129	44144273	44146129	-	ENST00000459642.1@GCK	ENST00000459642.1	protein_coding	44145497,44144273	44146129,44145280	Gene ID= ENSG00000106633.15 TPM= 3.72 Transcript Type= retained_intron
chr7	44217150	44325633	44217150	44325633	-	transcript1758.chr7.nnic@CAMK2B	transcript1758.chr7.nnic	protein_coding	44325357,44284131,44263005,44258872,44254542,44247120,44243425,44243250,44242560,44242218,44241700,44240707,44234639,44234390,44232822,44231006,44229388,44228796,44226516,44225763,44220826,44220616,44220060,44217150	44325633,44284225,44263064,44258926,44254607,44247192,44243527,44243333,44242654,44242340,44241783,44240749,44234676,44234461,44232866,44231054,44229501,44228924,44226644,44225891,44220901,44220710,44220294,44219522	Gene ID= ENSG00000058404.19 TPM= 36.73 Transcript Type= NA
chr7	44217150	44325686	44217150	44325686	-	transcript1773.chr7.nic@CAMK2B	transcript1773.chr7.nic	protein_coding	44325357,44284131,44263005,44258872,44254542,44247120,44243425,44243250,44242560,44242218,44241700,44240707,44234639,44234390,44232822,44231006,44229388,44228796,44226516,44220826,44220616,44220060,44217150	44325686,44284225,44263064,44258926,44254607,44247192,44243527,44243333,44242654,44242340,44241783,44240749,44234676,44234461,44232866,44231054,44229501,44228924,44226644,44220901,44220710,44220294,44219522	Gene ID= ENSG00000058404.19 TPM= 89.84 Transcript Type= NA
chr7	44217150	44325635	44217150	44325635	-	transcript1787.chr7.nnic@CAMK2B	transcript1787.chr7.nnic	protein_coding	44325357,44284131,44263005,44258872,44254542,44247120,44243425,44243250,44242560,44242218,44241700,44240707,44234639,44234390,44232822,44231006,44228796,44226516,44220826,44220616,44220060,44217150	44325635,44284225,44263064,44258926,44254607,44247192,44243527,44243333,44242654,44242340,44241783,44240749,44234676,44234461,44232866,44231054,44228924,44226644,44220901,44220710,44220294,44219522	Gene ID= ENSG00000058404.19 TPM= 37.89 Transcript Type= NA
chr7	44219346	44325669	44219346	44325669	-	transcript1794.chr7.nic@CAMK2B	transcript1794.chr7.nic	protein_coding	44325357,44284131,44263005,44258872,44254542,44247120,44243425,44243250,44242560,44242218,44241700,44240707,44234639,44234390,44231006,44229388,44228796,44226516,44220826,44220616,44220060,44219346	44325669,44284225,44263064,44258926,44254607,44247192,44243527,44243333,44242654,44242340,44241783,44240749,44234676,44234461,44231054,44229501,44228924,44226644,44220901,44220710,44220294,44219522	Gene ID= ENSG00000058404.19 TPM= 12.07 Transcript Type= NA
chr7	44217156	44325498	44217156	44325498	-	ENST00000395749.6@CAMK2B	ENST00000395749.6	protein_coding	44325357,44284131,44263005,44258872,44254542,44247120,44243425,44243250,44242560,44242218,44241700,44240707,44239589,44234639,44234390,44232822,44231006,44229388,44228796,44226516,44220826,44220616,44220060,44217156	44325498,44284225,44263064,44258926,44254607,44247192,44243527,44243333,44242654,44242340,44241783,44240749,44239663,44234676,44234461,44232866,44231054,44229501,44228924,44226644,44220901,44220710,44220294,44219522	Gene ID= ENSG00000058404.19 TPM= 49.92 Transcript Type= protein_coding
chr7	44379121	44490880	44379121	44490880	-	ENST00000355451.7@NUDCD3	ENST00000355451.7	protein_coding	44490409,44484968,44427571,44404440,44392297,44379121	44490880,44485284,44427703,44404583,44392485,44386121	Gene ID= ENSG00000015676.17 TPM= 59.48 Transcript Type= protein_coding
chr7	44387167	44490604	44387167	44490604	-	transcript1824.chr7.nic@NUDCD3	transcript1824.chr7.nic	protein_coding	44490409,44484968,44427571,44404440,44387167	44490604,44485284,44427703,44404583,44392485	Gene ID= ENSG00000015676.17 TPM= 3.19 Transcript Type= NA
chr7	44403788	44490630	44403788	44490630	-	transcript1827.chr7.nic@NUDCD3	transcript1827.chr7.nic	protein_coding	44490409,44484968,44427571,44403788	44490630,44485284,44427703,44404583	Gene ID= ENSG00000015676.17 TPM= 2.12 Transcript Type= NA
chr7	44478687	44480965	44478687	44480965	+	transcript1832.chr7.nnic@NA	transcript1832.chr7.nnic	NA	44478687	44480965	Gene ID= novel_gene_chr7_1833 TPM= 7.44 Transcript Type= NA
chr7	44565417	44574002	44565417	44574002	-	ENST00000258772.9@DDX56	ENST00000258772.9	protein_coding	44573836,44573583,44572890,44572574,44572347,44571492,44570758,44570015,44569809,44569130,44568903,44568118,44566448,44565417	44574002,44573744,44573050,44572744,44572437,44571736,44570877,44570128,44569903,44569203,44568992,44568223,44566524,44566079	Gene ID= ENSG00000136271.10 TPM= 4.25 Transcript Type= protein_coding
chr7	44565804	44573895	44565804	44573895	-	ENST00000446987.5@DDX56	ENST00000446987.5	protein_coding	44573836,44573583,44572890,44572563,44572347,44571492,44570758,44570015,44569809,44569130,44568903,44568118,44566448,44565804	44573895,44573744,44573050,44572744,44572437,44571736,44570877,44570128,44569903,44569203,44568992,44568223,44566524,44566079	Gene ID= ENSG00000136271.10 TPM= 28.68 Transcript Type= nonsense_mediated_decay
chr7	44565819	44573758	44565819	44573758	-	ENST00000485367.5@DDX56	ENST00000485367.5	protein_coding	44573583,44572890,44572574,44572347,44571492,44570758,44570015,44569809,44569130,44568903,44568118,44566448,44565819	44573758,44573050,44572744,44572437,44571736,44570877,44570128,44569903,44569203,44568992,44568223,44566524,44566079	Gene ID= ENSG00000136271.10 TPM= 2.12 Transcript Type= processed_transcript
chr7	44577894	44582259	44577894	44582259	-	ENST00000457408.6@TMED4	ENST00000457408.6	protein_coding	44582047,44581723,44581449,44581093,44577894	44582259,44581823,44581574,44581239,44579628	Gene ID= ENSG00000158604.14 TPM= 23.9 Transcript Type= protein_coding
chr7	44577894	44582287	44577894	44582287	-	ENST00000289577.9@TMED4	ENST00000289577.9	protein_coding	44582047,44581723,44581449,44577894	44582287,44581823,44581574,44579628	Gene ID= ENSG00000158604.14 TPM= 7.97 Transcript Type= protein_coding
chr7	44579897	44582231	44579897	44582231	-	ENST00000481238.1@TMED4	ENST00000481238.1	protein_coding	44582047,44581723,44581449,44579897	44582231,44581823,44581574,44581239	Gene ID= ENSG00000158604.14 TPM= 61.07 Transcript Type= protein_coding
chr7	44579904	44582210	44579904	44582210	-	ENST00000477639.5@TMED4	ENST00000477639.5	protein_coding	44581723,44581449,44579904	44582210,44581574,44581239	Gene ID= ENSG00000158604.14 TPM= 3.72 Transcript Type= retained_intron
chr7	44606628	44708994	44606628	44708994	+	ENST00000631326.2@OGDH	ENST00000631326.2	protein_coding	44606628,44624317,44645327,44647657,44666736,44673787,44674411,44675178,44675970,44681720,44693825,44694424,44696025,44696429,44696914,44697370,44697603,44697611,44697624,44698192,44700141,44701543,44707225,44707582,44707879,44707935	44606653,44624565,44645518,44647759,44666851,44673941,44674557,44675268,44676149,44681848,44694004,44694576,44696127,44696557,44697064,44697497,44697607,44697622,44697782,44698263,44700269,44701615,44707388,44707736,44707933,44708994	Gene ID= ENSG00000105953.14 TPM= 57.89 Transcript Type= protein_coding
chr7	44606588	44676594	44606588	44676594	+	ENST00000443864.6@OGDH	ENST00000443864.6	protein_coding	44606588,44624317,44645327,44647657,44666736,44673787,44674411,44675178,44675970	44606653,44624565,44645518,44647759,44666851,44673941,44674557,44675268,44676594	Gene ID= ENSG00000105953.14 TPM= 3.19 Transcript Type= protein_coding
chr7	44606639	44709066	44606639	44709066	+	ENST00000222673.5@OGDH	ENST00000222673.5	protein_coding	44606639,44624317,44645327,44647657,44666736,44673787,44674411,44675178,44675970,44681720,44693825,44694424,44696025,44696429,44696914,44697370,44697604,44698192,44700141,44701543,44707225,44707582,44707879	44606653,44624565,44645518,44647759,44666851,44673941,44674557,44675268,44676149,44681848,44694004,44694576,44696127,44696557,44697064,44697497,44697782,44698263,44700269,44701615,44707388,44707736,44709066	Gene ID= ENSG00000105953.14 TPM= 295.81 Transcript Type= protein_coding
chr7	44748931	44769881	44748931	44769881	+	ENST00000309315.8@ZMIZ2	ENST00000309315.8	protein_coding	44748931,44756188,44756425,44756947,44757378,44757848,44759281,44760151,44760425,44761449,44761695,44762881,44763256,44764419,44764941,44765335,44766164,44766421,44767516	44748991,44756299,44756539,44757149,44757561,44758108,44759460,44760228,44760593,44761593,44761905,44762986,44763413,44764486,44765009,44765579,44766333,44766663,44769881	Gene ID= ENSG00000122515.14 TPM= 16.99 Transcript Type= protein_coding
chr7	44795117	44796508	44795117	44796508	-	transcript1876.chr7.nnic@NA	transcript1876.chr7.nnic	NA	44795117	44796508	Gene ID= novel_gene_chr7_1877 TPM= 2.12 Transcript Type= NA
chr7	44796681	44801630	44796681	44801630	+	ENST00000489459.5@PPIA	ENST00000489459.5	protein_coding	44796681,44798748,44799247,44799392,44799702,44801287	44796793,44798904,44799277,44799480,44799874,44801630	Gene ID= ENSG00000196262.13 TPM= 10.09 Transcript Type= protein_coding
chr7	44796680	44803117	44796680	44803117	+	ENST00000468812.5@PPIA	ENST00000468812.5	protein_coding	44796680,44799247,44799392,44799702,44801287	44796793,44799277,44799480,44799874,44803117	Gene ID= ENSG00000196262.13 TPM= 142.86 Transcript Type= protein_coding
chr7	44834228	44848076	44834228	44848076	-	ENST00000350771.7@H2AFV	ENST00000350771.7	protein_coding	44847969,44840899,44835529,44834228	44848076,44841012,44835658,44834562	Gene ID= ENSG00000105968.18 TPM= 1.68 Transcript Type= protein_coding
chr7	44826791	44848077	44826791	44848077	-	ENST00000222690.10@H2AFV	ENST00000222690.10	protein_coding	44847969,44843277,44840899,44835529,44826791	44848077,44843354,44841012,44835658,44830163	Gene ID= ENSG00000105968.18 TPM= 67.98 Transcript Type= protein_coding
chr7	44834228	44848063	44834228	44848063	-	ENST00000308153.8@H2AFV	ENST00000308153.8	protein_coding	44847969,44843277,44840899,44835529,44834228	44848063,44843354,44841012,44835658,44834562	Gene ID= ENSG00000105968.18 TPM= 76.03 Transcript Type= protein_coding
chr7	44834239	44848080	44834239	44848080	-	ENST00000381124.9@H2AFV	ENST00000381124.9	protein_coding	44847969,44843277,44840899,44834239	44848080,44843354,44841012,44834562	Gene ID= ENSG00000105968.18 TPM= 5.58 Transcript Type= protein_coding
chr7	44834228	44848021	44834228	44848021	-	ENST00000349299.7@H2AFV	ENST00000349299.7	protein_coding	44847969,44843277,44835529,44834228	44848021,44843354,44835658,44834562	Gene ID= ENSG00000105968.18 TPM= 1.68 Transcript Type= protein_coding
chr7	44834925	44848083	44834925	44848083	-	ENST00000446531.1@H2AFV	ENST00000446531.1	protein_coding	44847969,44843277,44840899,44834925	44848083,44843354,44841012,44835658	Gene ID= ENSG00000105968.18 TPM= 1.06 Transcript Type= protein_coding
chr7	44831975	44833477	44831975	44833477	-	transcript1899.chr7.nnic@NA	transcript1899.chr7.nnic	NA	44831975	44833477	Gene ID= novel_gene_chr7_1900 TPM= 9.56 Transcript Type= NA
chr7	44848416	44849568	44848416	44849568	+	ENST00000443162.1@LINC01952	ENST00000443162.1	antisense_RNA	44848416,44849459	44848493,44849568	Gene ID= ENSG00000234183.1 TPM= 1.06 Transcript Type= antisense_RNA
chr7	44882938	44885519	44882938	44885519	-	transcript1901.chr7.nnic@NA	transcript1901.chr7.nnic	NA	44882938	44885519	Gene ID= novel_gene_chr7_1902 TPM= 43.55 Transcript Type= NA
chr7	44884953	44886393	44884953	44886393	+	ENST00000608450.1@AC004854.2	ENST00000608450.1	antisense_RNA	44884953	44886393	Gene ID= ENSG00000272768.1 TPM= 4.25 Transcript Type= antisense_RNA
chr7	44962662	44979069	44962662	44979069	-	ENST00000495831.5@MYO1G	ENST00000495831.5	protein_coding	44978867,44976564,44975484,44975174,44972115,44971673,44970835,44970592,44970040,44969705,44969413,44967884,44967605,44966672,44966073,44965637,44964945,44964415,44964049,44962970,44962662	44979069,44976657,44975649,44975227,44972225,44971789,44971059,44970737,44970154,44969875,44969483,44967958,44967737,44966838,44966280,44965860,44965089,44964519,44964162,44963124,44962895	Gene ID= ENSG00000136286.14 TPM= 2.12 Transcript Type= nonsense_mediated_decay
chr7	44983023	44986834	44983023	44986834	-	ENST00000578968.5@SNHG15	ENST00000578968.5	lincRNA	44986525,44986021,44984357,44983822,44983023	44986834,44986097,44984426,44984046,44983322	Gene ID= ENSG00000232956.8 TPM= 2.12 Transcript Type= lincRNA
chr7	44999735	45076453	44999735	45076453	+	transcript1909.chr7.nic@CCM2	transcript1909.chr7.nic	protein_coding	44999735,45038253,45063918,45064463,45068443,45069826,45071750,45072726,45073460,45074270,45075777	44999857,45038426,45064001,45064646,45068579,45069961,45071872,45072783,45073571,45074408,45076453	Gene ID= ENSG00000136280.15 TPM= 5.76 Transcript Type= NA
chr7	45000169	45076453	45000169	45076453	+	transcript1911.chr7.nic@CCM2	transcript1911.chr7.nic	protein_coding	45000169,45038253,45063918,45064463,45068443,45069826,45071750,45072726,45073460,45074270,45075777	45000363,45038426,45064001,45064646,45068579,45069961,45071872,45072783,45073571,45074408,45076453	Gene ID= ENSG00000136280.15 TPM= 14.25 Transcript Type= NA
chr7	45000186	45076453	45000186	45076453	+	transcript1923.chr7.nic@CCM2	transcript1923.chr7.nic	protein_coding	45000186,45063918,45064463,45068443,45069826,45071750,45072726,45073460,45074270,45075777	45000363,45064001,45064646,45068579,45069961,45071872,45072783,45073571,45074408,45076453	Gene ID= ENSG00000136280.15 TPM= 5.76 Transcript Type= NA
chr7	45000188	45076469	45000188	45076469	+	ENST00000541586.5@CCM2	ENST00000541586.5	protein_coding	45000188,45063918,45064463,45068443,45069826,45072726,45073460,45074270,45075777	45000363,45064001,45064646,45068579,45069961,45072783,45073571,45074408,45076469	Gene ID= ENSG00000136280.15 TPM= 11.07 Transcript Type= protein_coding
chr7	45000185	45076467	45000185	45076467	+	ENST00000258781.10@CCM2	ENST00000258781.10	protein_coding	45000185,45038253,45063918,45064463,45068443,45069826,45072726,45073460,45074270,45075777	45000363,45038426,45064001,45064646,45068579,45069961,45072783,45073571,45074408,45076467	Gene ID= ENSG00000136280.15 TPM= 71.61 Transcript Type= protein_coding
chr7	45000249	45076414	45000249	45076414	+	ENST00000488727.5@CCM2	ENST00000488727.5	protein_coding	45000249,45038253,45063918,45064463,45068443,45069826,45073460,45074270,45075777	45000363,45038426,45064001,45064646,45068579,45069961,45073571,45074408,45076414	Gene ID= ENSG00000136280.15 TPM= 5.31 Transcript Type= nonsense_mediated_decay
chr7	45000188	45076469	45000188	45076469	+	ENST00000544363.5@CCM2	ENST00000544363.5	protein_coding	45000188,45038253,45063918,45064463,45072726,45073460,45074270,45075777	45000363,45038426,45064001,45064646,45072783,45073571,45074408,45076469	Gene ID= ENSG00000136280.15 TPM= 3.63 Transcript Type= protein_coding
chr7	45080438	45088914	45080438	45088914	-	ENST00000490531.2@NACAD	ENST00000490531.2	protein_coding	45088828,45082108,45081755,45081601,45081117,45080876,45080640,45080438	45088914,45086112,45081867,45081672,45081263,45081022,45080762,45080523	Gene ID= ENSG00000136274.8 TPM= 8.5 Transcript Type= protein_coding
chr7	45100099	45104322	45100099	45104322	-	transcript1969.chr7.nnic@NA	transcript1969.chr7.nnic	NA	45100099	45104322	Gene ID= novel_gene_chr7_1970 TPM= 2.12 Transcript Type= NA
chr7	45100100	45111728	45100100	45111728	-	transcript1952.chr7.nic@TBRG4	transcript1952.chr7.nic	protein_coding	45111664,45108827,45105441,45104538,45104099,45103333,45102347,45101825,45101503,45101258,45100100	45111728,45109287,45105764,45104709,45104256,45103443,45102491,45102070,45101614,45101372,45100426	Gene ID= ENSG00000136270.13 TPM= 35.85 Transcript Type= NA
chr7	45100100	45112047	45100100	45112047	-	ENST00000395655.8@TBRG4	ENST00000395655.8	protein_coding	45111664,45108827,45105441,45103333,45102347,45101825,45101503,45101258,45100100	45112047,45109287,45105764,45103443,45102491,45102070,45101614,45101372,45100426	Gene ID= ENSG00000136270.13 TPM= 6.64 Transcript Type= protein_coding
chr7	45100100	45111714	45100100	45111714	-	ENST00000258770.7@TBRG4	ENST00000258770.7	protein_coding	45111643,45108827,45105441,45104538,45104099,45103333,45102347,45101825,45101503,45101258,45100100	45111714,45109287,45105764,45104709,45104256,45103443,45102491,45102070,45101614,45101372,45100426	Gene ID= ENSG00000136270.13 TPM= 116.04 Transcript Type= protein_coding
chr7	45100100	45111718	45100100	45111718	-	ENST00000361278.7@TBRG4	ENST00000361278.7	protein_coding	45111643,45108827,45105441,45103333,45102347,45101825,45101503,45101258,45100100	45111718,45109287,45105764,45103443,45102491,45102070,45101614,45101372,45100426	Gene ID= ENSG00000136270.13 TPM= 12.48 Transcript Type= protein_coding
chr7	45157794	45184250	45157794	45184250	+	transcript1972.chr7.nnic@RAMP3	transcript1972.chr7.nnic	protein_coding	45157794,45162258,45163698,45177309,45183157	45157886,45162421,45163866,45177441,45184250	Gene ID= ENSG00000122679.8 TPM= 3.19 Transcript Type= NA
chr7	45157794	45164034	45157794	45164034	+	transcript1976.chr7.nnic@RAMP3	transcript1976.chr7.nnic	protein_coding	45157794,45162258,45163698	45157886,45162421,45164034	Gene ID= ENSG00000122679.8 TPM= 2.12 Transcript Type= NA
chr7	45157791	45184250	45157791	45184250	+	ENST00000242249.8@RAMP3	ENST00000242249.8	protein_coding	45157791,45177309,45183157	45157886,45177441,45184250	Gene ID= ENSG00000122679.8 TPM= 95.59 Transcript Type= protein_coding
chr7	45157811	45160369	45157811	45160369	+	transcript1978.chr7.nnic@NA	transcript1978.chr7.nnic	NA	45157811	45160369	Gene ID= novel_gene_chr7_1979 TPM= 8.5 Transcript Type= NA
chr7	45180978	45184247	45180978	45184247	+	transcript1980.chr7.nnic@NA	transcript1980.chr7.nnic	NA	45180978	45184247	Gene ID= novel_gene_chr7_1981 TPM= 5.31 Transcript Type= NA
chr7	45190342	45192335	45190342	45192335	-	transcript1982.chr7.nnic@NA	transcript1982.chr7.nnic	NA	45190342	45192335	Gene ID= novel_gene_chr7_1983 TPM= 3.19 Transcript Type= NA
chr7	45726333	45768977	45726333	45768977	-	transcript1991.chr7.nnic@SEPT7P2	transcript1991.chr7.nnic	transcribed_unprocessed_pseudogene	45768660,45759074,45758043,45756909,45751529,45748626,45747215,45744997,45736787,45728178,45726333	45768977,45759174,45758177,45756992,45751646,45748714,45747311,45745048,45736910,45728313,45726861	Gene ID= ENSG00000214765.8 TPM= 2.12 Transcript Type= NA
chr7	45723789	45725031	45723789	45725031	-	transcript1994.chr7.nnic@NA	transcript1994.chr7.nnic	NA	45723789	45725031	Gene ID= novel_gene_chr7_1995 TPM= 2.12 Transcript Type= NA
chr7	45782741	45810091	45782741	45810091	+	transcript1996.chr7.nnic@GTF2IP13	transcript1996.chr7.nnic	transcribed_unprocessed_pseudogene	45782741,45788717,45791788,45795075,45797039,45797478,45798533,45805097,45807340,45807490	45783144,45788954,45791852,45795192,45797140,45797668,45798601,45805289,45807397,45810091	Gene ID= ENSG00000272556.2 TPM= 7.44 Transcript Type= NA
chr7	45912352	45920759	45912352	45920759	-	transcript2001.chr7.nnic@IGFBP3	transcript2001.chr7.nnic	protein_coding	45920738,45917213,45916548,45914805,45912352	45920759,45917439,45916667,45914945,45913641	Gene ID= ENSG00000146674.14 TPM= 7.44 Transcript Type= NA
chr7	47275154	47453235	47275154	47453235	-	transcript2004.chr7.nic@TNS3	transcript2004.chr7.nic	protein_coding	47452933,47442003,47439487,47437263,47435282,47428312,47424101,47415094,47413937,47411727,47400785,47400393,47396800,47368365,47346187,47344924,47344755,47304832,47302950,47302186,47297082,47293733,47292828,47291955,47283697,47280286,47280164,47275154	47453235,47442055,47439658,47437313,47435404,47428376,47424184,47415206,47413997,47411802,47400914,47400458,47396904,47369621,47346356,47345038,47344838,47305003,47303584,47302272,47297213,47293828,47292905,47292032,47283865,47280354,47280190,47278220	Gene ID= ENSG00000136205.16 TPM= 9.91 Transcript Type= NA
chr7	47275154	47328157	47275154	47328157	-	transcript2005.chr7.nnic@TNS3	transcript2005.chr7.nnic	protein_coding	47327981,47304832,47302950,47302186,47297082,47293733,47292828,47291955,47283697,47280286,47280164,47275154	47328157,47305003,47303584,47302272,47297213,47293828,47292905,47292032,47283865,47280354,47280190,47278220	Gene ID= ENSG00000136205.16 TPM= 20.53 Transcript Type= NA
chr7	47275154	47305143	47275154	47305143	-	transcript2007.chr7.nic@TNS3	transcript2007.chr7.nic	protein_coding	47304832,47302950,47302186,47297082,47293733,47292828,47291955,47283697,47280286,47280164,47275154	47305143,47303584,47302272,47297213,47293828,47292905,47292032,47283865,47280354,47280190,47278220	Gene ID= ENSG00000136205.16 TPM= 17.35 Transcript Type= NA
chr7	47963292	47979660	47963292	47979660	-	transcript2012.chr7.nic@HUS1	transcript2012.chr7.nic	protein_coding	47979468,47978689,47978417,47976730,47975613,47969219,47967806,47965300,47963292	47979660,47978816,47978593,47976837,47975687,47969318,47967925,47965438,47964632	Gene ID= ENSG00000136273.11 TPM= 6.37 Transcript Type= NA
chr7	47965166	47979553	47965166	47979553	-	ENST00000432325.5@HUS1	ENST00000432325.5	protein_coding	47979410,47978689,47978417,47976730,47975613,47969219,47967806,47965166	47979553,47978816,47978593,47976837,47975687,47969318,47967925,47965438	Gene ID= ENSG00000136273.11 TPM= 2.12 Transcript Type= protein_coding
chr7	47960765	47962740	47960765	47962740	+	transcript2019.chr7.nnic@NA	transcript2019.chr7.nnic	NA	47960765	47962740	Gene ID= novel_gene_chr7_2020 TPM= 3.19 Transcript Type= NA
chr7	48089237	48108419	48089237	48108419	+	ENST00000395564.8@UPP1	ENST00000395564.8	protein_coding	48089237,48090188,48094763,48099670,48101824,48103297,48106873,48107361,48108218	48089418,48090364,48094827,48099787,48101982,48103411,48107082,48107507,48108419	Gene ID= ENSG00000183696.13 TPM= 5.31 Transcript Type= protein_coding
chr7	49774758	49912542	49774758	49912542	+	transcript2032.chr7.nic@VWC2	transcript2032.chr7.nic	protein_coding	49774758,49802711,49912034	49776131,49802840,49912542	Gene ID= ENSG00000188730.4 TPM= 15.93 Transcript Type= NA
chr7	49914077	49916754	49914077	49916754	+	transcript2035.chr7.nnic@NA	transcript2035.chr7.nnic	NA	49914077	49916754	Gene ID= novel_gene_chr7_2036 TPM= 2.12 Transcript Type= NA
chr7	50401428	50404448	50401428	50404448	+	transcript2037.chr7.nnic@NA	transcript2037.chr7.nnic	NA	50401428	50404448	Gene ID= novel_gene_chr7_2038 TPM= 2.12 Transcript Type= NA
chr7	50444129	50450390	50444129	50450390	-	ENST00000615084.4@FIGNL1	ENST00000615084.4	protein_coding	50450301,50448181,50444129	50450390,50448289,50447297	Gene ID= ENSG00000132436.11 TPM= 1.06 Transcript Type= protein_coding
chr7	50444133	50450350	50444133	50450350	-	ENST00000395556.6@FIGNL1	ENST00000395556.6	protein_coding	50450301,50449563,50448181,50444133	50450350,50449723,50448289,50447297	Gene ID= ENSG00000132436.11 TPM= 2.12 Transcript Type= protein_coding
chr7	50450440	50453317	50450440	50453317	+	transcript2044.chr7.nnic@NA	transcript2044.chr7.nnic	NA	50450440	50453317	Gene ID= novel_gene_chr7_2045 TPM= 6.37 Transcript Type= NA
chr7	50592580	50793454	50592580	50793454	-	transcript2056.chr7.nnic@GRB10	transcript2056.chr7.nnic	protein_coding	50793224,50755887,50732272,50705140,50703821,50674436,50669722,50626822,50619170,50618071,50616210,50614770,50612741,50606337,50605290,50604311,50603998,50595437,50592580	50793454,50756056,50732368,50705323,50703908,50674658,50669863,50626978,50619285,50618139,50616347,50614880,50612839,50606414,50605406,50604377,50604085,50595530,50593098	Gene ID= ENSG00000106070.17 TPM= 2.66 Transcript Type= NA
chr7	50592580	50793454	50592580	50793454	-	transcript2063.chr7.nic@GRB10	transcript2063.chr7.nic	protein_coding	50793224,50755887,50732272,50703821,50674436,50669722,50626822,50619170,50618071,50616210,50614770,50612741,50606337,50605290,50604311,50603998,50595437,50592580	50793454,50756056,50732368,50703908,50674658,50669863,50626978,50619285,50618139,50616347,50614880,50612839,50606414,50605406,50604377,50604085,50595530,50593098	Gene ID= ENSG00000106070.17 TPM= 3.72 Transcript Type= NA
chr7	50590063	50793462	50590063	50793462	-	ENST00000335866.7@GRB10	ENST00000335866.7	protein_coding	50793224,50755887,50703821,50674436,50669722,50626822,50619170,50618071,50616210,50614770,50612741,50606337,50605290,50604311,50603998,50595437,50590063	50793462,50756056,50703908,50674658,50669863,50626978,50619285,50618139,50616347,50614880,50612839,50606414,50605406,50604377,50604085,50595530,50593098	Gene ID= ENSG00000106070.17 TPM= 8.5 Transcript Type= protein_coding
chr7	50592610	50793436	50592610	50793436	-	ENST00000402497.5@GRB10	ENST00000402497.5	protein_coding	50793224,50703821,50674436,50669722,50626822,50619170,50618071,50616210,50614770,50612741,50606337,50605290,50604311,50603998,50595437,50592610	50793436,50703908,50674658,50669863,50626978,50619285,50618139,50616347,50614880,50612839,50606414,50605406,50604377,50604085,50595530,50593098	Gene ID= ENSG00000106070.17 TPM= 1.06 Transcript Type= protein_coding
chr7	50688536	50690007	50688536	50690007	+	transcript2096.chr7.nnic@NA	transcript2096.chr7.nnic	NA	50688536	50690007	Gene ID= novel_gene_chr7_2097 TPM= 4.25 Transcript Type= NA
chr7	50773000	50775009	50773000	50775009	+	transcript2098.chr7.nnic@NA	transcript2098.chr7.nnic	NA	50773000	50775009	Gene ID= novel_gene_chr7_2099 TPM= 3.19 Transcript Type= NA
chr7	51070828	51316764	51070828	51316764	-	ENST00000441453.5@COBL	ENST00000441453.5	protein_coding	51316593,51219741,51193379,51190850,51184102,51136158,51085166,51070828	51316764,51219944,51193589,51191078,51184199,51136331,51085304,51073385	Gene ID= ENSG00000106078.17 TPM= 8.5 Transcript Type= protein_coding
chr7	51072716	51316763	51072716	51316763	-	ENST00000632460.1@COBL	ENST00000632460.1	protein_coding	51316593,51219741,51193379,51190850,51187914,51184102,51136158,51085166,51072716	51316763,51219944,51193589,51191078,51187958,51184199,51136331,51085304,51073385	Gene ID= ENSG00000106078.17 TPM= 6.37 Transcript Type= protein_coding
chr7	54752251	54759246	54752251	54759246	-	ENST00000352861.8@SEC61G	ENST00000352861.8	protein_coding	54759158,54757495,54755779,54752251	54759246,54757594,54755881,54752420	Gene ID= ENSG00000132432.13 TPM= 72.23 Transcript Type= protein_coding
chr7	54759328	54767245	54759328	54767245	+	transcript2148.chr7.nnic@AC074351.1	transcript2148.chr7.nnic	antisense_RNA	54759328,54765903,54767000	54759524,54766021,54767245	Gene ID= ENSG00000234707.2 TPM= 3.19 Transcript Type= NA
chr7	55196180	55200626	55196180	55200626	-	transcript2149.chr7.nnic@NA	transcript2149.chr7.nnic	NA	55196180	55200626	Gene ID= novel_gene_chr7_2150 TPM= 2.12 Transcript Type= NA
chr7	55207562	55211563	55207562	55211563	+	transcript2151.chr7.nnic@NA	transcript2151.chr7.nnic	NA	55207562	55211563	Gene ID= novel_gene_chr7_2152 TPM= 2.12 Transcript Type= NA
chr7	55365448	55433742	55365448	55433742	+	ENST00000254770.2@LANCL2	ENST00000254770.2	protein_coding	55365448,55391793,55398423,55399957,55401174,55411907,55425254,55428375,55431226	55366229,55391910,55398630,55400104,55401320,55412089,55425430,55428447,55433742	Gene ID= ENSG00000132434.9 TPM= 8.5 Transcript Type= protein_coding
chr7	55462554	55463751	55462554	55463751	-	transcript2155.chr7.nnic@NA	transcript2155.chr7.nnic	NA	55462554	55463751	Gene ID= novel_gene_chr7_2156 TPM= 2.12 Transcript Type= NA
chr7	55470613	55572525	55470613	55572525	-	ENST00000285279.9@VOPP1	ENST00000285279.9	protein_coding	55572271,55521072,55497613,55492282,55470613	55572525,55521130,55497690,55492418,55473045	Gene ID= ENSG00000154978.12 TPM= 52.05 Transcript Type= protein_coding
chr7	55568083	55572460	55568083	55572460	-	transcript2163.chr7.nnic@NA	transcript2163.chr7.nnic	NA	55568083	55572460	Gene ID= novel_gene_chr7_2164 TPM= 3.19 Transcript Type= NA
chr7	55951819	55956501	55951819	55956501	+	ENST00000285298.8@MRPS17	ENST00000285298.8	protein_coding	55951819,55953179,55954909	55951930,55953318,55956501	Gene ID= ENSG00000239789.5 TPM= 31.86 Transcript Type= protein_coding
chr7	55964581	56000181	55964581	56000181	+	ENST00000322090.7@NIPSNAP2	ENST00000322090.7	protein_coding	55964581,55978126,55978350,55981473,55982210,55983728,55984847,55994894,55997366,55999008	55964701,55978265,55978395,55981567,55982280,55983868,55984878,55994988,55997449,56000181	Gene ID= ENSG00000146729.9 TPM= 526.28 Transcript Type= protein_coding
chr7	55964581	56000181	55964581	56000181	+	ENST00000446778.5@NIPSNAP2	ENST00000446778.5	protein_coding	55964581,55978126,55981473,55983728,55984847,55994894,55997366,55999008	55964701,55978265,55981567,55983868,55984878,55994988,55997449,56000181	Gene ID= ENSG00000146729.9 TPM= 4.84 Transcript Type= protein_coding
chr7	56011068	56051581	56011068	56051581	-	transcript2220.chr7.nic@PSPH	transcript2220.chr7.nic	protein_coding	56051138,56033961,56033381,56031929,56021073,56019600,56017234,56015023,56011068	56051581,56034154,56033494,56032054,56021231,56019734,56017379,56015171,56011869	Gene ID= ENSG00000146733.13 TPM= 4.6 Transcript Type= NA
chr7	56011067	56051604	56011067	56051604	-	ENST00000275605.7@PSPH	ENST00000275605.7	protein_coding	56051138,56033961,56031929,56021073,56019600,56017234,56015023,56011067	56051604,56034106,56032054,56021231,56019734,56017379,56015171,56011869	Gene ID= ENSG00000146733.13 TPM= 2.47 Transcript Type= protein_coding
chr7	56011068	56051604	56011068	56051604	-	ENST00000395471.7@PSPH	ENST00000395471.7	protein_coding	56051138,56033961,56031929,56021073,56019600,56017234,56015023,56011068	56051604,56034154,56032054,56021231,56019734,56017379,56015171,56011869	Gene ID= ENSG00000146733.13 TPM= 4.6 Transcript Type= protein_coding
chr7	56051630	56063989	56051630	56063989	+	ENST00000275603.8@CCT6A	ENST00000275603.8	protein_coding	56051630,56052422,56054369,56055624,56056311,56057993,56058362,56058620,56059544,56060269,56060807,56061747,56062683,56063013	56051985,56052485,56054503,56055797,56056414,56058103,56058521,56058702,56059640,56060416,56060940,56061849,56062755,56063989	Gene ID= ENSG00000146731.10 TPM= 177.91 Transcript Type= protein_coding
chr7	56051685	56063989	56051685	56063989	+	ENST00000335503.3@CCT6A	ENST00000335503.3	protein_coding	56051685,56052422,56055624,56056311,56057993,56058362,56058620,56059544,56060269,56060807,56061747,56062683,56063013	56051985,56052485,56055797,56056414,56058103,56058521,56058702,56059640,56060416,56060940,56061849,56062755,56063989	Gene ID= ENSG00000146731.10 TPM= 3.72 Transcript Type= protein_coding
chr7	56064224	56080670	56064224	56080670	+	ENST00000434526.6@SUMF2	ENST00000434526.6	protein_coding	56064224,56068482,56072997,56074174,56074586,56076834,56078102,56078364,56079528	56064378,56068638,56073111,56074218,56074736,56076889,56078186,56078508,56080670	Gene ID= ENSG00000129103.17 TPM= 26.55 Transcript Type= protein_coding
chr7	56064002	56080124	56064002	56080124	+	ENST00000395436.6@SUMF2	ENST00000395436.6	protein_coding	56064002,56068482,56072997,56074586,56076834,56078102,56078364,56079528	56064378,56068638,56073111,56074736,56076889,56078186,56078508,56080124	Gene ID= ENSG00000129103.17 TPM= 1.06 Transcript Type= protein_coding
chr7	56064308	56080669	56064308	56080669	+	ENST00000438133.5@SUMF2	ENST00000438133.5	protein_coding	56064308,56068482,56072997,56076834,56078102,56078364,56079528	56064378,56068638,56073111,56076889,56078186,56078508,56080669	Gene ID= ENSG00000129103.17 TPM= 3.19 Transcript Type= nonsense_mediated_decay
chr7	56064301	56080638	56064301	56080638	+	ENST00000423763.5@SUMF2	ENST00000423763.5	protein_coding	56064301,56068482,56072997,56074174,56076834,56078102,56078364,56079528	56064378,56068638,56073111,56074218,56076889,56078186,56078508,56080638	Gene ID= ENSG00000129103.17 TPM= 4.25 Transcript Type= nonsense_mediated_decay
chr7	56080283	56092996	56080283	56092996	-	ENST00000452681.6@PHKG1	ENST00000452681.6	protein_coding	56092836,56088859,56087598,56086970,56084149,56083650,56083278,56082163,56081893,56081630,56080283	56092996,56088975,56087776,56087024,56084244,56083715,56083441,56082253,56082046,56081755,56081299	Gene ID= ENSG00000164776.9 TPM= 1.06 Transcript Type= protein_coding
chr7	56080283	56092996	56080283	56092996	-	ENST00000537360.5@PHKG1	ENST00000537360.5	protein_coding	56092836,56088859,56087598,56086970,56083650,56083278,56082163,56081893,56081630,56080283	56092996,56088975,56087776,56087024,56083724,56083441,56082253,56082046,56081755,56081299	Gene ID= ENSG00000164776.9 TPM= 12.75 Transcript Type= protein_coding
chr7	56101569	56106576	56101569	56106576	-	ENST00000395422.3@CHCHD2	ENST00000395422.3	protein_coding	56106364,56104226,56102867,56101569	56106576,56104475,56103011,56101861	Gene ID= ENSG00000106153.12 TPM= 345.2 Transcript Type= protein_coding
chr7	64351263	64353923	64351263	64353923	+	transcript2255.chr7.nnic@NA	transcript2255.chr7.nnic	NA	64351263	64353923	Gene ID= novel_gene_chr7_2256 TPM= 2.12 Transcript Type= NA
chr7	64499069	64563106	64499069	64563106	-	transcript2259.chr7.nnic@ZNF680	transcript2259.chr7.nnic	protein_coding	64562925,64544306,64543707,64521064,64499069	64563106,64544432,64543802,64522500,64501373	Gene ID= ENSG00000173041.11 TPM= 3.19 Transcript Type= NA
chr7	64519884	64563106	64519884	64563106	-	ENST00000309683.10@ZNF680	ENST00000309683.10	protein_coding	64562925,64544306,64543707,64519884	64563106,64544432,64543802,64522500	Gene ID= ENSG00000173041.11 TPM= 7.44 Transcript Type= protein_coding
chr7	64524580	64563097	64524580	64563097	-	transcript2270.chr7.nic@ZNF680	transcript2270.chr7.nic	protein_coding	64562925,64543707,64524580	64563097,64543802,64526517	Gene ID= ENSG00000173041.11 TPM= 3.19 Transcript Type= NA
chr7	64508550	64510040	64508550	64510040	+	transcript2271.chr7.nnic@NA	transcript2271.chr7.nnic	NA	64508550	64510040	Gene ID= novel_gene_chr7_2272 TPM= 10.62 Transcript Type= NA
chr7	64524573	64528643	64524573	64528643	-	transcript2281.chr7.nnic@NA	transcript2281.chr7.nnic	NA	64524573	64528643	Gene ID= novel_gene_chr7_2282 TPM= 3.19 Transcript Type= NA
chr7	64527555	64531613	64527555	64531613	+	transcript2275.chr7.nnic@NA	transcript2275.chr7.nnic	NA	64527555	64531613	Gene ID= novel_gene_chr7_2276 TPM= 7.44 Transcript Type= NA
chr7	64554517	64556277	64554517	64556277	+	transcript2277.chr7.nnic@NA	transcript2277.chr7.nnic	NA	64554517	64556277	Gene ID= novel_gene_chr7_2278 TPM= 10.62 Transcript Type= NA
chr7	64561031	64563077	64561031	64563077	-	transcript2283.chr7.nnic@NA	transcript2283.chr7.nnic	NA	64561031	64563077	Gene ID= novel_gene_chr7_2284 TPM= 2.12 Transcript Type= NA
chr7	64563839	64566576	64563839	64566576	-	transcript2287.chr7.nnic@NA	transcript2287.chr7.nnic	NA	64563839	64566576	Gene ID= novel_gene_chr7_2288 TPM= 2.12 Transcript Type= NA
chr7	64566362	64568822	64566362	64568822	-	transcript2285.chr7.nnic@NA	transcript2285.chr7.nnic	NA	64566362	64568822	Gene ID= novel_gene_chr7_2286 TPM= 3.19 Transcript Type= NA
chr7	64794425	64831803	64794425	64831803	+	ENST00000494380.5@ZNF138	ENST00000494380.5	protein_coding	64794425,64814918,64815576,64830940,64831451	64794571,64815044,64815653,64831076,64831803	Gene ID= ENSG00000197008.9 TPM= 1.06 Transcript Type= protein_coding
chr7	64794490	64833676	64794490	64833676	+	ENST00000430838.2@ZNF138	ENST00000430838.2	protein_coding	64794490,64831451	64794571,64833676	Gene ID= ENSG00000197008.9 TPM= 2.12 Transcript Type= processed_transcript
chr7	64794422	64797056	64794422	64797056	+	transcript2291.chr7.nnic@NA	transcript2291.chr7.nnic	NA	64794422	64797056	Gene ID= novel_gene_chr7_2292 TPM= 5.31 Transcript Type= NA
chr7	64888527	64889332	64888527	64889332	-	transcript2296.chr7.nic@AC073349.1	transcript2296.chr7.nic	antisense_RNA	64889066,64888527	64889332,64888817	Gene ID= ENSG00000189316.3 TPM= 2.12 Transcript Type= NA
chr7	65006084	65006659	65006084	65006659	-	ENST00000535538.1@ERV3-1	ENST00000535538.1	protein_coding	65006541,65006084	65006659,65006322	Gene ID= ENSG00000213462.4 TPM= 1.06 Transcript Type= processed_transcript
chr7	65038360	65074713	65038360	65074713	+	ENST00000426828.5@CCT6P3	ENST00000426828.5	transcribed_unprocessed_pseudogene	65038360,65064999,65066253,65066945,65068456,65068709,65069661,65070346,65070909,65073441,65073778	65038565,65065133,65066426,65067050,65068610,65068790,65069757,65070484,65071042,65073514,65074713	Gene ID= ENSG00000234585.6 TPM= 5.31 Transcript Type= processed_transcript
chr7	65373799	65401125	65373799	65401125	+	ENST00000328747.11@ZNF92	ENST00000328747.11	protein_coding	65373799,65387902,65388806,65398341	65374000,65388028,65388901,65401125	Gene ID= ENSG00000146757.13 TPM= 6.37 Transcript Type= protein_coding
chr7	65873267	65959563	65873267	65959563	+	ENST00000360768.3@VKORC1L1	ENST00000360768.3	protein_coding	65873267,65948671,65954074	65873565,65948780,65959563	Gene ID= ENSG00000196715.5 TPM= 8.5 Transcript Type= protein_coding
chr7	65960684	65982314	65960684	65982314	-	ENST00000304895.8@GUSB	ENST00000304895.8	protein_coding	65981974,65980224,65979727,65979399,65976015,65974919,65974526,65974295,65970282,65967731,65964323,65960684	65982314,65980409,65979911,65979541,65976202,65975071,65974704,65974441,65970366,65967907,65964458,65961063	Gene ID= ENSG00000169919.16 TPM= 10.8 Transcript Type= protein_coding
chr7	65960684	65982215	65960684	65982215	-	transcript2337.chr7.nic@GUSB	transcript2337.chr7.nic	protein_coding	65981974,65980224,65979727,65979399,65976015,65974526,65974295,65970282,65967731,65964323,65960684	65982215,65980409,65979911,65979541,65976202,65974704,65974441,65970366,65967907,65964458,65961063	Gene ID= ENSG00000169919.16 TPM= 13.99 Transcript Type= NA
chr7	65960688	65976160	65960688	65976160	-	ENST00000466883.5@GUSB	ENST00000466883.5	protein_coding	65974295,65967731,65964323,65960688	65976160,65967907,65964458,65961063	Gene ID= ENSG00000169919.16 TPM= 4.96 Transcript Type= retained_intron
chr7	66075866	66093144	66075866	66093144	+	ENST00000380839.8@ASL	ENST00000380839.8	protein_coding	66075866,66081803,66082368,66082880,66083077,66086585,66087334,66087729,66088807,66089091,66089276,66089612,66092006,66092557,66092768	66076093,66081997,66082451,66082936,66083174,66086662,66087386,66087791,66088921,66089175,66089335,66089695,66092086,66092663,66093144	Gene ID= ENSG00000126522.16 TPM= 2.12 Transcript Type= protein_coding
chr7	66075874	66092931	66075874	66092931	+	ENST00000395332.7@ASL	ENST00000395332.7	protein_coding	66075874,66081803,66082368,66082880,66083077,66086585,66086744,66087334,66087729,66088807,66089091,66089276,66089612,66092006,66092557,66092768	66076093,66081997,66082451,66082936,66083174,66086662,66086821,66087386,66087791,66088921,66089175,66089335,66089695,66092086,66092663,66092931	Gene ID= ENSG00000126522.16 TPM= 12.75 Transcript Type= protein_coding
chr7	66114836	66154567	66114836	66154567	+	transcript2352.chr7.nnic@CRCP	transcript2352.chr7.nnic	protein_coding	66114836,66127704,66130744,66134280,66145443,66152208,66154307	66114970,66127740,66130842,66134374,66145500,66153737,66154567	Gene ID= ENSG00000241258.6 TPM= 5.31 Transcript Type= NA
chr7	66114605	66154561	66114605	66154561	+	ENST00000395326.7@CRCP	ENST00000395326.7	protein_coding	66114605,66127704,66130744,66134280,66145443,66152208	66114970,66127740,66130842,66134374,66145500,66154561	Gene ID= ENSG00000241258.6 TPM= 14.87 Transcript Type= protein_coding
chr7	66205199	66360443	66205199	66360443	+	ENST00000304842.5@TPST1	ENST00000304842.5	protein_coding	66205199,66240325,66286511,66352505,66356825,66359895	66205522,66241270,66286709,66352555,66356871,66360443	Gene ID= ENSG00000169902.13 TPM= 8.5 Transcript Type= protein_coding
chr7	66485933	66491616	66485933	66491616	-	transcript2366.chr7.nic@LINC00174	transcript2366.chr7.nic	processed_transcript	66491031,66489938,66485933	66491616,66490107,66488038	Gene ID= ENSG00000179406.7 TPM= 2.12 Transcript Type= NA
chr7	66493706	66495474	66493706	66495474	+	ENST00000445681.1@GS1-124K5.4	ENST00000445681.1	lincRNA	66493706,66495255	66494025,66495474	Gene ID= ENSG00000237310.1 TPM= 4.25 Transcript Type= lincRNA
chr7	66553569	66592400	66553569	66592400	-	transcript2375.chr7.nnic@AC006001.3	transcript2375.chr7.nnic	transcribed_unprocessed_pseudogene	66592257,66573385,66560579,66553569	66592400,66573550,66560675,66554837	Gene ID= ENSG00000229180.6 TPM= 9.56 Transcript Type= NA
chr7	66553565	66592400	66553565	66592400	-	transcript2380.chr7.nic@AC006001.3	transcript2380.chr7.nic	transcribed_unprocessed_pseudogene	66592257,66573385,66553565	66592400,66573550,66554837	Gene ID= ENSG00000229180.6 TPM= 11.15 Transcript Type= NA
chr7	66530297	66592386	66530297	66592386	-	ENST00000639011.1@AC006001.3	ENST00000639011.1	transcribed_unprocessed_pseudogene	66592257,66573385,66554585,66545601,66531791,66530297	66592386,66573550,66554837,66545686,66531871,66531399	Gene ID= ENSG00000229180.6 TPM= 1.06 Transcript Type= processed_transcript
chr7	66547088	66548118	66547088	66548118	-	transcript2384.chr7.nnic@NA	transcript2384.chr7.nnic	NA	66547088	66548118	Gene ID= novel_gene_chr7_2385 TPM= 2.12 Transcript Type= NA
chr7	66628767	66644015	66628767	66644015	+	ENST00000639828.1@KCTD7	ENST00000639828.1	protein_coding	66628767,66633275,66638253,66638856	66629208,66633444,66638431,66644015	Gene ID= ENSG00000243335.9 TPM= 4.25 Transcript Type= protein_coding
chr7	66739975	66811459	66739975	66811459	+	ENST00000437078.6@RABGEF1	ENST00000437078.6	protein_coding	66739975,66771883,66775227,66795511,66797374,66799323,66805140,66808886	66740792,66772078,66775393,66795592,66797506,66799414,66805396,66811459	Gene ID= ENSG00000284461.1 TPM= 1.77 Transcript Type= protein_coding
chr7	66740686	66811459	66740686	66811459	+	transcript2398.chr7.nnic@RABGEF1	transcript2398.chr7.nnic	protein_coding	66740686,66775227,66783675,66795511,66797374,66799323,66805140,66808886	66740792,66775393,66783841,66795592,66797506,66799414,66805396,66811459	Gene ID= ENSG00000284461.1 TPM= 3.9 Transcript Type= NA
chr7	66682112	66685692	66682112	66685692	+	transcript2410.chr7.nnic@RABGEF1	transcript2410.chr7.nnic	protein_coding	66682112,66685360	66682258,66685692	Gene ID= ENSG00000284461.1 TPM= 4.25 Transcript Type= NA
chr7	66740733	66811464	66740733	66811464	+	ENST00000284957.9@RABGEF1	ENST00000284957.9	protein_coding	66740733,66771883,66775227,66783675,66795511,66797374,66799323,66805140,66808886	66740792,66772078,66775393,66783841,66795592,66797506,66799414,66805396,66811464	Gene ID= ENSG00000154710.16 TPM= 4.96 Transcript Type= protein_coding
chr7	66902857	66906297	66902857	66906297	+	ENST00000610177.1@AC073335.2	ENST00000610177.1	lincRNA	66902857	66906297	Gene ID= ENSG00000273142.1 TPM= 1.06 Transcript Type= lincRNA
chr7	66921208	66956153	66921208	66956153	+	transcript2415.chr7.nnic@TMEM248	transcript2415.chr7.nnic	protein_coding	66921208,66922149,66941848,66944976,66948542,66950952,66953226,66955502	66921461,66922246,66942024,66945261,66948694,66951135,66953369,66956153	Gene ID= ENSG00000106609.16 TPM= 5.84 Transcript Type= NA
chr7	66921225	66958551	66921225	66958551	+	ENST00000341567.8@TMEM248	ENST00000341567.8	protein_coding	66921225,66941848,66944976,66948544,66950952,66953226,66955502	66921461,66942024,66945261,66948694,66951135,66953369,66958551	Gene ID= ENSG00000106609.16 TPM= 150.83 Transcript Type= protein_coding
chr7	66921209	66923439	66921209	66923439	-	transcript2421.chr7.nnic@NA	transcript2421.chr7.nnic	NA	66921209	66923439	Gene ID= novel_gene_chr7_2422 TPM= 6.9 Transcript Type= NA
chr7	66987744	66995576	66987744	66995576	-	ENST00000414306.5@SBDS	ENST00000414306.5	protein_coding	66995290,66994220,66993217,66991137,66987744	66995576,66994341,66993417,66991301,66988499	Gene ID= ENSG00000126524.9 TPM= 10.62 Transcript Type= nonsense_mediated_decay
chr7	66996808	67239514	66996808	67239514	+	transcript2427.chr7.nic@TYW1	transcript2427.chr7.nic	protein_coding	66996808,66998065,66998817,67009583,67017853,67024900,67049949,67055835,67067285,67083430,67098541,67117483,67183126,67195170,67238308	66996982,66998195,66998954,67009684,67018143,67025022,67050066,67055887,67067403,67083539,67098718,67117618,67183236,67195337,67239514	Gene ID= ENSG00000198874.12 TPM= 5.31 Transcript Type= NA
chr7	66996808	67025012	66996808	67025012	+	transcript2429.chr7.nic@TYW1	transcript2429.chr7.nic	protein_coding	66996808,66998065,66998817,67009583,67014367,67017853,67024900	66996982,66998195,66998954,67009684,67014561,67018143,67025012	Gene ID= ENSG00000198874.12 TPM= 5.31 Transcript Type= NA
chr7	66996815	67239514	66996815	67239514	+	ENST00000359626.9@TYW1	ENST00000359626.9	protein_coding	66996815,66998065,66998817,67009583,67014367,67017853,67024900,67049949,67055835,67067285,67083430,67098541,67117483,67183126,67195170,67238308	66996982,66998195,66998954,67009684,67014561,67018143,67025022,67050066,67055887,67067403,67083539,67098718,67117618,67183236,67195337,67239514	Gene ID= ENSG00000198874.12 TPM= 13.81 Transcript Type= protein_coding
chr7	67254514	67302451	67254514	67302451	-	transcript2439.chr7.nnic@PMS2P4	transcript2439.chr7.nnic	transcribed_unprocessed_pseudogene	67302376,67299285,67297217,67295618,67292463,67254514	67302451,67299424,67297303,67295801,67292549,67255258	Gene ID= ENSG00000067601.7 TPM= 3.19 Transcript Type= NA
chr7	67302621	67321526	67302621	67321526	+	ENST00000416602.6@STAG3L4	ENST00000416602.6	transcribed_unprocessed_pseudogene	67302621,67305987,67308935,67309564,67320103	67302885,67306083,67309139,67309715,67321526	Gene ID= ENSG00000106610.14 TPM= 15.93 Transcript Type= processed_transcript
chr7	67302621	67312707	67302621	67312707	+	transcript2446.chr7.nic@STAG3L4	transcript2446.chr7.nic	transcribed_unprocessed_pseudogene	67302621,67305987,67308935,67309564	67302885,67306083,67309139,67312707	Gene ID= ENSG00000106610.14 TPM= 6.37 Transcript Type= NA
chr7	67302625	67304277	67302625	67304277	-	transcript2448.chr7.nnic@NA	transcript2448.chr7.nnic	NA	67302625	67304277	Gene ID= novel_gene_chr7_2449 TPM= 2.12 Transcript Type= NA
chr7	67318938	67320557	67318938	67320557	-	transcript2450.chr7.nnic@NA	transcript2450.chr7.nnic	NA	67318938	67320557	Gene ID= novel_gene_chr7_2451 TPM= 5.31 Transcript Type= NA
chr7	67319652	67322606	67319652	67322606	-	transcript2452.chr7.nnic@NA	transcript2452.chr7.nnic	NA	67319652	67322606	Gene ID= novel_gene_chr7_2453 TPM= 2.12 Transcript Type= NA
chr7	70790504	70792868	70790504	70792868	+	transcript2456.chr7.nnic@NA	transcript2456.chr7.nnic	NA	70790504	70792868	Gene ID= novel_gene_chr7_2457 TPM= 6.37 Transcript Type= NA
chr7	71335549	71572233	71335549	71572233	+	transcript2475.chr7.nic@GALNT17	transcript2475.chr7.nic	protein_coding	71335549,71388235,71415889,71420908,71571285	71335733,71388401,71416063,71421105,71572233	Gene ID= ENSG00000185274.11 TPM= 5.58 Transcript Type= NA
chr7	71335549	71713598	71335549	71713598	+	ENST00000618959.1@GALNT17	ENST00000618959.1	protein_coding	71335549,71388235,71415889,71420908,71571285,71665411,71669972,71677211,71710761,71712018	71335733,71388401,71416063,71421105,71571402,71665596,71670109,71677306,71710928,71713598	Gene ID= ENSG00000185274.11 TPM= 164.9 Transcript Type= protein_coding
chr7	71134837	71136876	71134837	71136876	-	transcript2481.chr7.nnic@NA	transcript2481.chr7.nnic	NA	71134837	71136876	Gene ID= novel_gene_chr7_2482 TPM= 21.24 Transcript Type= NA
chr7	71427085	71428727	71427085	71428727	-	transcript2485.chr7.nnic@NA	transcript2485.chr7.nnic	NA	71427085	71428727	Gene ID= novel_gene_chr7_2486 TPM= 3.19 Transcript Type= NA
chr7	71439945	71441406	71439945	71441406	-	transcript2483.chr7.nnic@NA	transcript2483.chr7.nnic	NA	71439945	71441406	Gene ID= novel_gene_chr7_2484 TPM= 8.5 Transcript Type= NA
chr7	72829460	72837371	72829460	72837371	+	transcript2492.chr7.nic@SBDSP1	transcript2492.chr7.nic	transcribed_unprocessed_pseudogene	72829460,72831602,72833764,72836577	72829783,72831798,72833928,72837371	Gene ID= ENSG00000225648.5 TPM= 9.56 Transcript Type= NA
chr7	72829507	72834006	72829507	72834006	+	ENST00000437201.5@SBDSP1	ENST00000437201.5	transcribed_unprocessed_pseudogene	72829507,72830692,72831602,72833764	72829783,72830813,72831798,72834006	Gene ID= ENSG00000225648.5 TPM= 1.06 Transcript Type= processed_transcript
chr7	72894345	72896326	72894345	72896326	+	transcript2515.chr7.nnic@NA	transcript2515.chr7.nnic	NA	72894345	72896326	Gene ID= novel_gene_chr7_2516 TPM= 3.19 Transcript Type= NA
chr7	72914493	72917415	72914493	72917415	-	transcript2517.chr7.nnic@NA	transcript2517.chr7.nnic	NA	72914493	72917415	Gene ID= novel_gene_chr7_2518 TPM= 8.5 Transcript Type= NA
chr7	72948299	72954725	72948299	72954725	-	transcript2503.chr7.nnic@NSUN5P2	transcript2503.chr7.nnic	transcribed_unprocessed_pseudogene	72954625,72953511,72953326,72952152,72950058,72949846,72949103,72948892,72948299	72954725,72954479,72953430,72952295,72950196,72949961,72949491,72948980,72948808	Gene ID= ENSG00000106133.17 TPM= 3.19 Transcript Type= NA
chr7	72998484	73005915	72998484	73005915	-	ENST00000448173.5@STAG3L3	ENST00000448173.5	transcribed_unprocessed_pseudogene	73005693,73003645,73003021,73000358,72999761,72998484	73005915,73003730,73003137,73000481,72999859,72999550	Gene ID= ENSG00000174353.17 TPM= 7.44 Transcript Type= processed_transcript
chr7	73154938	73207283	73154938	73207283	+	ENST00000544802.5@GTF2IP4	ENST00000544802.5	transcribed_processed_pseudogene	73154938,73175415,73176857,73179087,73180539,73182077,73183115,73184661,73190066,73191371,73192497,73192951,73194626,73195636,73195879,73197964,73198693,73199696,73200449,73202112,73203423,73204563,73205383,73206152	73155343,73175525,73176922,73179270,73180597,73182148,73183298,73184719,73190137,73191554,73192555,73193025,73194727,73195701,73196062,73198019,73198773,73199779,73200632,73202140,73203464,73204604,73205458,73207283	Gene ID= ENSG00000233369.7 TPM= 133.83 Transcript Type= processed_transcript
chr7	73303230	73308867	73303230	73308867	-	ENST00000438747.6@NSUN5	ENST00000438747.6	protein_coding	73308698,73308431,73307583,73307394,73304959,73304747,73304230,73303826,73303600,73303230	73308867,73308553,73307757,73307502,73305097,73304862,73304408,73304036,73303740,73303529	Gene ID= ENSG00000130305.16 TPM= 41.42 Transcript Type= protein_coding
chr7	73303230	73308806	73303230	73308806	-	ENST00000252594.10@NSUN5	ENST00000252594.10	protein_coding	73308698,73308431,73307583,73307394,73304959,73304747,73304230,73303826,73303230	73308806,73308553,73307757,73307502,73305097,73304862,73304408,73304036,73303740	Gene ID= ENSG00000130305.16 TPM= 1.06 Transcript Type= protein_coding
chr7	73303225	73308816	73303225	73308816	-	ENST00000471461.5@NSUN5	ENST00000471461.5	protein_coding	73308698,73307583,73307394,73304959,73304747,73304230,73303826,73303600,73303225	73308816,73308553,73307502,73305097,73304862,73304404,73304036,73303740,73303529	Gene ID= ENSG00000130305.16 TPM= 2.12 Transcript Type= retained_intron
chr7	73477047	73522314	73477047	73522314	-	transcript2527.chr7.nic@BAZ1B	transcript2527.chr7.nic	protein_coding	73521827,73510736,73508327,73498497,73492800,73489194,73477047	73522314,73510852,73508471,73498698,73492921,73489391,73478569	Gene ID= ENSG00000009954.10 TPM= 22.31 Transcript Type= NA
chr7	73440414	73442016	73440414	73442016	-	transcript2530.chr7.nnic@NA	transcript2530.chr7.nnic	NA	73440414	73442016	Gene ID= novel_gene_chr7_2531 TPM= 16.99 Transcript Type= NA
chr7	73536356	73558002	73536356	73558002	-	ENST00000223368.6@BCL7B	ENST00000223368.6	protein_coding	73557487,73552167,73543548,73539882,73537934,73536356	73558002,73552242,73543644,73540052,73538013,73537390	Gene ID= ENSG00000106635.7 TPM= 210.84 Transcript Type= protein_coding
chr7	73536371	73557671	73536371	73557671	-	ENST00000411832.5@BCL7B	ENST00000411832.5	protein_coding	73557487,73552167,73543548,73537934,73536371	73557671,73552242,73543644,73538013,73537390	Gene ID= ENSG00000106635.7 TPM= 7.44 Transcript Type= protein_coding
chr7	73568932	73578791	73568932	73578791	-	ENST00000305632.9@TBL2	ENST00000305632.9	protein_coding	73578420,73574383,73573938,73573320,73572844,73571189,73568932	73578791,73574513,73574122,73573471,73572970,73571341,73570972	Gene ID= ENSG00000106638.15 TPM= 3.19 Transcript Type= protein_coding
chr7	73569660	73578590	73569660	73578590	-	ENST00000450285.5@TBL2	ENST00000450285.5	protein_coding	73578420,73574383,73573961,73573320,73572844,73571189,73569660	73578590,73574513,73574122,73573471,73572970,73571341,73570972	Gene ID= ENSG00000106638.15 TPM= 16.99 Transcript Type= nonsense_mediated_decay
chr7	73667825	73672110	73667825	73672110	+	ENST00000324941.4@VPS37D	ENST00000324941.4	protein_coding	73667825,73669419,73670020,73671014	73668096,73669590,73670102,73672110	Gene ID= ENSG00000176428.5 TPM= 9.56 Transcript Type= protein_coding
chr7	73680969	73683453	73680969	73683453	-	ENST00000395176.2@DNAJC30	ENST00000395176.2	protein_coding	73680969	73683453	Gene ID= ENSG00000176410.7 TPM= 2.12 Transcript Type= protein_coding
chr7	73683557	73698212	73683557	73698212	+	transcript2565.chr7.nic@BUD23	transcript2565.chr7.nic	protein_coding	73683557,73683767,73686636,73686818,73686999,73690916,73692596,73693329,73693624,73697605,73697832	73683673,73683804,73686731,73686900,73687095,73691012,73692646,73693414,73693669,73697694,73698212	Gene ID= ENSG00000071462.11 TPM= 10.97 Transcript Type= NA
chr7	73683568	73698212	73683568	73698212	+	ENST00000265758.6@BUD23	ENST00000265758.6	protein_coding	73683568,73683767,73686636,73686818,73686999,73690916,73692596,73693329,73693624,73693992,73697605,73697832	73683673,73683804,73686731,73686900,73687095,73691012,73692646,73693414,73693669,73694050,73697694,73698212	Gene ID= ENSG00000071462.11 TPM= 65.14 Transcript Type= protein_coding
chr7	73683626	73698208	73683626	73698208	+	ENST00000423497.5@BUD23	ENST00000423497.5	protein_coding	73683626,73683767,73686636,73686818,73686999,73690916,73692596,73693329,73693624,73693992,73697466,73697605,73697832	73683673,73683804,73686731,73686900,73687095,73691012,73692646,73693414,73693669,73694050,73697516,73697694,73698208	Gene ID= ENSG00000071462.11 TPM= 4.6 Transcript Type= protein_coding
chr7	73699206	73719661	73699206	73719661	-	transcript2568.chr7.nic@STX1A	transcript2568.chr7.nic	protein_coding	73719602,73709045,73708589,73705150,73704350,73704148,73703755,73702845,73700730,73699206	73719661,73709122,73708688,73705224,73704423,73704256,73703828,73702982,73700931,73700484	Gene ID= ENSG00000106089.11 TPM= 3.19 Transcript Type= NA
chr7	73715781	73719285	73715781	73719285	-	transcript2573.chr7.nnic@NA	transcript2573.chr7.nnic	NA	73715781	73719285	Gene ID= novel_gene_chr7_2574 TPM= 2.12 Transcript Type= NA
chr7	73736094	73738852	73736094	73738852	-	ENST00000437775.6@ABHD11	ENST00000437775.6	protein_coding	73738646,73738328,73737562,73737221,73736929,73736094	73738852,73738442,73737735,73737391,73737110,73736691	Gene ID= ENSG00000106077.18 TPM= 1.59 Transcript Type= protein_coding
chr7	73736094	73738867	73736094	73738867	-	ENST00000222800.7@ABHD11	ENST00000222800.7	protein_coding	73738646,73738328,73737562,73737221,73736929,73736094	73738867,73738463,73737735,73737391,73737110,73736691	Gene ID= ENSG00000106077.18 TPM= 34.52 Transcript Type= protein_coding
chr7	73736290	73738823	73736290	73738823	-	ENST00000458339.5@ABHD11	ENST00000458339.5	protein_coding	73738646,73738328,73737562,73736290	73738823,73738463,73737735,73736691	Gene ID= ENSG00000106077.18 TPM= 1.06 Transcript Type= protein_coding
chr7	73736094	73738860	73736094	73738860	-	transcript2588.chr7.nic@ABHD11	transcript2588.chr7.nic	protein_coding	73738646,73738328,73736094	73738860,73738463,73737735	Gene ID= ENSG00000106077.18 TPM= 3.19 Transcript Type= NA
chr7	73768997	73770270	73768997	73770270	-	ENST00000395145.3@CLDN3	ENST00000395145.3	protein_coding	73768997	73770270	Gene ID= ENSG00000165215.6 TPM= 1.06 Transcript Type= protein_coding
chr7	73834590	73842535	73834590	73842535	-	ENST00000297873.8@METTL27	ENST00000297873.8	protein_coding	73842490,73842018,73841070,73840414,73840031,73834590	73842535,73842144,73841198,73840549,73840120,73835002	Gene ID= ENSG00000165171.10 TPM= 1.06 Transcript Type= protein_coding
chr7	74027789	74069907	74027789	74069907	+	ENST00000252034.11@ELN	ENST00000252034.11	protein_coding	74027789,74035364,74036555,74037707,74041216,74042614,74042984,74043118,74043879,74045222,74046188,74046696,74047675,74048142,74048503,74051750,74051924,74053163,74054716,74056271,74056672,74057640,74059886,74060140,74060376,74061101,74063153,74063310,74063621,74065694,74065944,74066732,74068657	74028269,74035414,74036584,74037739,74041251,74042706,74043034,74043168,74043920,74045293,74046217,74046767,74047716,74048201,74048556,74051839,74051983,74053309,74054769,74056435,74056713,74057696,74060047,74060184,74060501,74061139,74063224,74063369,74063695,74065732,74065997,74066776,74069907	Gene ID= ENSG00000049540.16 TPM= 5.31 Transcript Type= protein_coding
chr7	74028118	74069904	74028118	74069904	+	transcript2600.chr7.nic@ELN	transcript2600.chr7.nic	protein_coding	74028118,74035364,74036555,74037707,74041216,74042614,74042984,74043118,74043879,74045222,74046188,74046696,74047675,74048142,74048503,74051750,74051924,74053163,74054716,74056271,74056672,74059886,74060140,74060376,74061101,74063153,74063310,74063621,74065694,74066732,74068657	74028269,74035414,74036584,74037739,74041251,74042706,74043034,74043168,74043920,74045293,74046217,74046767,74047716,74048201,74048556,74051839,74051983,74053309,74054769,74056435,74056713,74060047,74060184,74060501,74061139,74063224,74063369,74063695,74065732,74066776,74069904	Gene ID= ENSG00000049540.16 TPM= 3.19 Transcript Type= NA
chr7	74028173	74069904	74028173	74069904	+	ENST00000429192.5@ELN	ENST00000429192.5	protein_coding	74028173,74035364,74036555,74037707,74041216,74042614,74042984,74043103,74043879,74045222,74046188,74046696,74047675,74048142,74048503,74051750,74051924,74053163,74054716,74056271,74056672,74059886,74060140,74060376,74061101,74063153,74063310,74063621,74065694,74066732,74068657	74028269,74035414,74036584,74037739,74041251,74042706,74043034,74043168,74043920,74045293,74046217,74046767,74047716,74048201,74048556,74051839,74051983,74053309,74054769,74056435,74056713,74060047,74060184,74060501,74061139,74063224,74063369,74063695,74065732,74066776,74069904	Gene ID= ENSG00000049540.16 TPM= 4.25 Transcript Type= protein_coding
chr7	74028170	74069907	74028170	74069907	+	ENST00000357036.9@ELN	ENST00000357036.9	protein_coding	74028170,74035364,74036555,74037707,74041216,74042614,74042984,74043103,74043879,74045222,74046188,74046696,74047675,74048142,74048503,74051750,74051924,74053163,74054716,74056271,74056672,74057640,74059886,74060140,74060376,74061101,74063153,74063310,74063621,74065694,74066732,74068657	74028269,74035414,74036584,74037739,74041251,74042706,74043034,74043168,74043920,74045293,74046217,74046767,74047716,74048201,74048556,74051839,74051983,74053309,74054769,74056435,74056713,74057696,74060047,74060184,74060501,74061139,74063224,74063369,74063695,74065732,74066776,74069907	Gene ID= ENSG00000049540.16 TPM= 6.37 Transcript Type= protein_coding
chr7	74028157	74069678	74028157	74069678	+	ENST00000380575.8@ELN	ENST00000380575.8	protein_coding	74028157,74035364,74037707,74041216,74042614,74042984,74043118,74043879,74045222,74046188,74046696,74047675,74048142,74048503,74051750,74051924,74053163,74054716,74056271,74056672,74059886,74060140,74060376,74061101,74063153,74063310,74063621,74065694,74066732,74068657	74028269,74035414,74037739,74041251,74042706,74043034,74043168,74043920,74045293,74046217,74046767,74047716,74048201,74048556,74051839,74051983,74053309,74054769,74056435,74056713,74060047,74060184,74060501,74061139,74063224,74063369,74063695,74065732,74066776,74069678	Gene ID= ENSG00000049540.16 TPM= 1.06 Transcript Type= protein_coding
chr7	74174356	74197096	74174356	74197096	+	ENST00000353999.6@EIF4H	ENST00000353999.6	protein_coding	74174356,74187611,74189673,74189822,74194741,74195169	74174442,74187798,74189737,74189918,74194878,74197096	Gene ID= ENSG00000106682.14 TPM= 571.97 Transcript Type= protein_coding
chr7	74209418	74229831	74209418	74229831	+	ENST00000460943.5@LAT2	ENST00000460943.5	protein_coding	74209418,74214822,74215947,74216825,74219744,74219960,74220217,74220584,74220704,74221637,74223724,74224018,74224639,74228944	74210088,74215010,74216069,74216864,74219787,74220008,74220254,74220619,74220734,74221692,74223783,74224197,74224760,74229831	Gene ID= ENSG00000086730.16 TPM= 1.06 Transcript Type= protein_coding
chr7	74209396	74229834	74209396	74229834	+	ENST00000344995.9@LAT2	ENST00000344995.9	protein_coding	74209396,74215947,74216825,74219744,74219960,74220217,74220584,74220704,74221637,74223724,74224018,74224639,74228944	74210088,74216069,74216864,74219787,74220008,74220254,74220619,74220734,74221692,74223783,74224197,74224760,74229834	Gene ID= ENSG00000086730.16 TPM= 1.06 Transcript Type= protein_coding
chr7	74231537	74254444	74231537	74254444	-	ENST00000055077.7@RFC2	ENST00000055077.7	protein_coding	74254271,74252429,74249739,74249012,74246662,74243146,74239938,74238923,74237362,74235532,74231537	74254444,74252498,74249780,74249118,74246763,74243246,74240095,74238988,74237442,74235645,74232216	Gene ID= ENSG00000049541.10 TPM= 13.81 Transcript Type= protein_coding
chr7	74289475	74405930	74289475	74405930	+	ENST00000361545.9@CLIP2	ENST00000361545.9	protein_coding	74289475,74317480,74338448,74353880,74356410,74357280,74360175,74364255,74375887,74380806,74386521,74389103,74397074,74400370,74401505,74403837	74289734,74317667,74339004,74354004,74356623,74357477,74360278,74364315,74376822,74380863,74386604,74389259,74397233,74400555,74401567,74405930	Gene ID= ENSG00000106665.15 TPM= 5.84 Transcript Type= protein_coding
chr7	74289475	74405943	74289475	74405943	+	ENST00000223398.10@CLIP2	ENST00000223398.10	protein_coding	74289475,74317480,74338448,74353880,74356410,74357280,74360175,74364255,74372932,74375887,74380806,74386521,74389103,74397074,74400370,74401505,74403837	74289734,74317667,74339004,74354004,74356623,74357477,74360278,74364315,74373036,74376822,74380863,74386604,74389259,74397233,74400555,74401567,74405943	Gene ID= ENSG00000106665.15 TPM= 10.09 Transcript Type= protein_coding
chr7	74454109	74602601	74454109	74602601	+	ENST00000424337.6@GTF2IRD1	ENST00000424337.6	protein_coding	74454109,74508075,74512830,74515441,74518139,74519409,74521208,74524071,74529734,74535113,74536167,74538136,74538680,74539879,74544755,74545744,74547103,74555174,74555438,74557639,74558861,74559627,74589851,74590825,74595014,74601044,74602365	74454176,74508203,74512971,74515596,74518322,74519719,74521297,74524154,74529917,74535138,74536275,74538173,74538760,74539968,74544802,74545809,74547286,74555223,74555494,74557722,74559044,74559655,74589928,74591017,74595051,74601180,74602601	Gene ID= ENSG00000006704.10 TPM= 8.5 Transcript Type= protein_coding
chr7	74473430	74473911	74473430	74473911	-	transcript2638.chr7.nnic@NA	transcript2638.chr7.nnic	NA	74473430	74473911	Gene ID= novel_gene_chr7_2639 TPM= 2.12 Transcript Type= NA
chr7	74657732	74743882	74657732	74743882	+	transcript2650.chr7.nic@GTF2I	transcript2650.chr7.nic	protein_coding	74657732,74689124,74690973,74698961,74700247,74700606,74705164,74706390,74711032,74716894,74728786,74730229,74732479,74733923,74735461,74736500,74738045,74743449	74658068,74689227,74691111,74699095,74700430,74700634,74705218,74706433,74711109,74716950,74728896,74730294,74732662,74733981,74735532,74736683,74738103,74743882	Gene ID= ENSG00000263001.5 TPM= 3.19 Transcript Type= NA
chr7	74657758	74760692	74657758	74760692	+	ENST00000620879.4@GTF2I	ENST00000620879.4	protein_coding	74657758,74689124,74690973,74698961,74700247,74700606,74705164,74706390,74711032,74716894,74728786,74730229,74732479,74733923,74735461,74736500,74738045,74743449,74744758,74745883,74746337,74748015,74749025,74749268,74751361,74752090,74753094,74753846,74755509,74756820,74757959,74758780,74759548	74658068,74689227,74691111,74699095,74700430,74700634,74705218,74706433,74711109,74716950,74728896,74730294,74732662,74733981,74735532,74736683,74738103,74743520,74744941,74745941,74746411,74748116,74749090,74749451,74751416,74752170,74753177,74754029,74755537,74756861,74758000,74758855,74760692	Gene ID= ENSG00000263001.5 TPM= 60.54 Transcript Type= protein_coding
chr7	74657758	74760692	74657758	74760692	+	ENST00000614986.4@GTF2I	ENST00000614986.4	protein_coding	74657758,74689124,74690973,74698961,74700247,74700606,74705164,74706390,74711032,74716894,74718879,74728786,74730229,74732479,74733923,74735461,74736500,74738045,74743449,74744758,74745883,74746337,74748015,74749025,74749268,74751361,74752090,74753094,74753846,74755509,74756820,74757959,74758780,74759548	74658068,74689227,74691111,74699095,74700430,74700634,74705218,74706433,74711109,74716950,74718941,74728896,74730294,74732662,74733981,74735532,74736683,74738103,74743520,74744941,74745941,74746411,74748116,74749090,74749451,74751416,74752170,74753177,74754029,74755537,74756861,74758000,74758855,74760692	Gene ID= ENSG00000263001.5 TPM= 28.68 Transcript Type= protein_coding
chr7	74796144	74851551	74796144	74851551	-	ENST00000451013.6@GTF2IRD2	ENST00000451013.6	protein_coding	74851367,74836280,74832805,74824933,74822624,74822427,74819969,74819554,74812739,74810896,74809108,74806934,74804777,74803298,74801985,74796144	74851551,74836383,74832943,74825052,74822807,74822455,74820023,74819597,74812816,74810952,74809173,74807011,74804860,74803481,74802013,74798265	Gene ID= ENSG00000196275.13 TPM= 8.5 Transcript Type= protein_coding
chr7	74832633	74851529	74832633	74851529	-	ENST00000614386.1@GTF2IRD2	ENST00000614386.1	protein_coding	74851367,74836280,74832633	74851529,74836383,74832943	Gene ID= ENSG00000196275.13 TPM= 7.44 Transcript Type= protein_coding
chr7	74882163	74890610	74882163	74890610	-	ENST00000426587.5@STAG3L2	ENST00000426587.5	transcribed_unprocessed_pseudogene	74890388,74888312,74887683,74885023,74884434,74884144,74883728,74882163	74890610,74888397,74887799,74885146,74884524,74884223,74883835,74883463	Gene ID= ENSG00000277072.4 TPM= 6.37 Transcript Type= processed_transcript
chr7	74905826	74907767	74905826	74907767	+	transcript2676.chr7.nnic@NA	transcript2676.chr7.nnic	NA	74905826	74907767	Gene ID= novel_gene_chr7_2677 TPM= 7.44 Transcript Type= NA
chr7	75026663	75028798	75026663	75028798	-	transcript2685.chr7.nnic@NA	transcript2685.chr7.nnic	NA	75026663	75028798	Gene ID= novel_gene_chr7_2686 TPM= 12.75 Transcript Type= NA
chr7	75028071	75031526	75028071	75031526	+	transcript2679.chr7.nnic@NA	transcript2679.chr7.nnic	NA	75028071	75031526	Gene ID= novel_gene_chr7_2680 TPM= 98.78 Transcript Type= NA
chr7	75042183	75073856	75042183	75073856	-	transcript2688.chr7.nnic@RCC1L	transcript2688.chr7.nnic	protein_coding	75073180,75070640,75066664,75064582,75063292,75061207,75058588,75057529,75055901,75052711,75042183	75073856,75070769,75066792,75064648,75063343,75061291,75058769,75057616,75056074,75052796,75043109	Gene ID= ENSG00000274523.4 TPM= 9.56 Transcript Type= NA
chr7	75042183	75073803	75042183	75073803	-	transcript2691.chr7.nnic@RCC1L	transcript2691.chr7.nnic	protein_coding	75073414,75070640,75066664,75064582,75063292,75061207,75058588,75057529,75052711,75042183	75073803,75070769,75066792,75064648,75063343,75061291,75058769,75057616,75052796,75043109	Gene ID= ENSG00000274523.4 TPM= 4.25 Transcript Type= NA
chr7	75042183	75073793	75042183	75073793	-	ENST00000610322.4@RCC1L	ENST00000610322.4	protein_coding	75073414,75070640,75066664,75064582,75063292,75061207,75058588,75057529,75055901,75052711,75042183	75073793,75070769,75066792,75064648,75063343,75061291,75058769,75057616,75056074,75052796,75043109	Gene ID= ENSG00000274523.4 TPM= 162.51 Transcript Type= protein_coding
chr7	75092524	75149817	75092524	75149817	+	transcript2697.chr7.nnic@GTF2IRD2B	transcript2697.chr7.nnic	protein_coding	75092524,75108960,75112397,75120891,75125916,75126342,75133135,75135001,75136785,75138950,75141103,75142482,75143950,75147694	75092765,75109063,75112535,75121010,75125970,75126385,75133212,75135057,75136850,75139027,75141186,75142665,75143978,75149817	Gene ID= ENSG00000174428.16 TPM= 2.66 Transcript Type= NA
chr7	75092581	75149817	75092581	75149817	+	ENST00000472837.5@GTF2IRD2B	ENST00000472837.5	protein_coding	75092581,75108960,75112397,75120891,75123136,75123488,75125916,75126342,75133135,75135001,75136785,75138950,75141103,75142482,75143950,75147694	75092765,75109063,75112535,75121010,75123319,75123516,75125970,75126385,75133212,75135057,75136850,75139027,75141186,75142665,75143978,75149817	Gene ID= ENSG00000174428.16 TPM= 9.03 Transcript Type= protein_coding
chr7	75092600	75112699	75092600	75112699	+	ENST00000614064.4@GTF2IRD2B	ENST00000614064.4	protein_coding	75092600,75108960,75112397	75092765,75109063,75112699	Gene ID= ENSG00000174428.16 TPM= 1.06 Transcript Type= protein_coding
chr7	75156639	75172044	75156639	75172044	-	ENST00000438382.2@NCF1C	ENST00000438382.2	unprocessed_pseudogene	75171872,75168632,75166802,75166537,75165124,75162897,75162326,75160659,75157866,75157250,75156639	75172044,75168710,75166877,75166702,75165179,75163019,75162433,75160776,75157970,75157395,75156915	Gene ID= ENSG00000165178.9 TPM= 5.31 Transcript Type= unprocessed_pseudogene
chr7	75185396	75237696	75185396	75237696	-	ENST00000622829.4@GTF2IP1	ENST00000622829.4	transcribed_unprocessed_pseudogene	75237293,75217154,75215756,75213406,75212079,75210528,75209376,75207956,75202542,75201121,75200121,75199651,75197948,75196974,75196613,75194657,75193903,75192899,75192047,75190539,75189215,75188075,75187220,75185396	75237696,75217264,75215821,75213589,75212137,75210599,75209559,75208014,75202613,75201304,75200179,75199725,75198049,75197039,75196796,75194712,75193983,75192980,75192230,75190567,75189256,75188116,75187295,75186527	Gene ID= ENSG00000277053.4 TPM= 63.73 Transcript Type= processed_transcript
chr7	75398142	75405605	75398142	75405605	+	ENST00000447409.6@TRIM73	ENST00000447409.6	protein_coding	75398142,75398916,75403645,75404839,75405185	75398262,75399332,75403740,75405069,75405605	Gene ID= ENSG00000178809.11 TPM= 1.06 Transcript Type= protein_coding
chr7	75410339	75416787	75410339	75416787	+	transcript2710.chr7.nic@NSUN5P1	transcript2710.chr7.nic	transcribed_unprocessed_pseudogene	75410339,75410606,75411655,75412789,75414640,75414885,75415120,75415592,75416275	75410460,75411574,75411759,75412932,75414798,75415023,75415234,75416191,75416787	Gene ID= ENSG00000223705.9 TPM= 6.37 Transcript Type= NA
chr7	75416790	75486271	75416790	75486271	-	ENST00000615331.4@POM121C	ENST00000615331.4	protein_coding	75485864,75475062,75474704,75441432,75440954,75439144,75437515,75426362,75425635,75425074,75424526,75424049,75421509,75419320,75416790	75486271,75475188,75474882,75441647,75441115,75439224,75437686,75426453,75425708,75425195,75424628,75424225,75423203,75419442,75418893	Gene ID= ENSG00000272391.5 TPM= 91.35 Transcript Type= protein_coding
chr7	75507753	75528123	75507753	75528123	-	ENST00000418756.5@PMS2P3	ENST00000418756.5	transcribed_unprocessed_pseudogene	75527565,75525905,75516094,75515718,75514645,75512589,75512309,75510931,75507753	75528123,75525963,75516220,75515828,75514779,75512675,75512421,75511114,75507867	Gene ID= ENSG00000127957.17 TPM= 1.06 Transcript Type= processed_transcript
chr7	75516271	75518676	75516271	75518676	+	transcript2726.chr7.nnic@NA	transcript2726.chr7.nnic	NA	75516271	75518676	Gene ID= novel_gene_chr7_2727 TPM= 2.12 Transcript Type= NA
chr7	75534441	75537890	75534441	75537890	-	transcript2733.chr7.nnic@NA	transcript2733.chr7.nnic	NA	75534441	75537890	Gene ID= novel_gene_chr7_2734 TPM= 2.12 Transcript Type= NA
chr7	75574936	75577343	75574936	75577343	+	transcript2731.chr7.nnic@NA	transcript2731.chr7.nnic	NA	75574936	75577343	Gene ID= novel_gene_chr7_2732 TPM= 4.25 Transcript Type= NA
chr7	75878999	75888926	75878999	75888926	+	ENST00000318622.8@RHBDD2	ENST00000318622.8	protein_coding	75878999,75881365,75881829,75883698,75887992	75879260,75881486,75882236,75883848,75888926	Gene ID= ENSG00000005486.16 TPM= 18.06 Transcript Type= protein_coding
chr7	75878948	75888921	75878948	75888921	+	ENST00000006777.10@RHBDD2	ENST00000006777.10	protein_coding	75878948,75881829,75883698,75887992	75879260,75882236,75883848,75888921	Gene ID= ENSG00000005486.16 TPM= 54.17 Transcript Type= protein_coding
chr7	75915079	75986855	75915079	75986855	+	ENST00000461988.5@POR	ENST00000461988.5	protein_coding	75915079,75953989,75972413,75979451,75980339,75981048,75981517,75982224,75983520,75983738,75984777,75985058,75985579,75985923,75986159,75986337	75915179,75954180,75972461,75979579,75980488,75981172,75981606,75982322,75983636,75983856,75984958,75985207,75985849,75986068,75986241,75986855	Gene ID= ENSG00000127948.15 TPM= 49.92 Transcript Type= protein_coding
chr7	75915164	75986855	75915164	75986855	+	ENST00000394893.5@POR	ENST00000394893.5	protein_coding	75915164,75953989,75972413,75979451,75980339,75981048,75981517,75982224,75983520,75983738,75984777,75985058,75985579,75985923,75986159	75915179,75954180,75972461,75979579,75980488,75981172,75981606,75982322,75983636,75983856,75984958,75985207,75985849,75986068,75986855	Gene ID= ENSG00000127948.15 TPM= 6.37 Transcript Type= protein_coding
chr7	75986837	75994659	75986837	75994659	-	ENST00000493111.6@TMEM120A	ENST00000493111.6	protein_coding	75994490,75992439,75992144,75989165,75988421,75988252,75988083,75987923,75987718,75987538,75987360,75986837	75994659,75992557,75992260,75989224,75988516,75988341,75988148,75987984,75987810,75987602,75987428,75987285	Gene ID= ENSG00000189077.10 TPM= 8.5 Transcript Type= protein_coding
chr7	75986985	75994574	75986985	75994574	-	ENST00000439537.5@TMEM120A	ENST00000439537.5	protein_coding	75994490,75992439,75992144,75989165,75988421,75988252,75988083,75987923,75987718,75987538,75987360,75986985	75994574,75992557,75992260,75989224,75988516,75988341,75988148,75987984,75987810,75987602,75987428,75987223	Gene ID= ENSG00000189077.10 TPM= 6.37 Transcript Type= protein_coding
chr7	75996342	76047983	75996342	76047983	-	ENST00000340062.9@STYXL1	ENST00000340062.9	protein_coding	76047812,76030421,76028642,76005259,76003758,76000890,75996342	76047983,76030524,76028703,76005404,76003855,76001002,75996599	Gene ID= ENSG00000127952.16 TPM= 1.06 Transcript Type= protein_coding
chr7	76048051	76049047	76048051	76049047	+	ENST00000461263.2@MDH2	ENST00000461263.2	protein_coding	76048051,76048576	76048226,76049047	Gene ID= ENSG00000146701.11 TPM= 2.12 Transcript Type= protein_coding
chr7	76048067	76067508	76048067	76067508	+	ENST00000315758.9@MDH2	ENST00000315758.9	protein_coding	76048067,76054830,76057410,76057969,76060373,76063515,76064339,76064802,76066279	76048226,76054998,76057493,76058078,76060498,76063592,76064438,76064953,76067508	Gene ID= ENSG00000146701.11 TPM= 55.23 Transcript Type= protein_coding
chr7	76281067	76287288	76281067	76287288	+	transcript2793.chr7.nic@SRRM3	transcript2793.chr7.nic	protein_coding	76281067,76282648,76282964,76283524,76285615	76281802,76282872,76283101,76283602,76287288	Gene ID= ENSG00000177679.15 TPM= 14.87 Transcript Type= NA
chr7	76281573	76287286	76281573	76287286	+	transcript2797.chr7.nic@SRRM3	transcript2797.chr7.nic	protein_coding	76281573,76282648,76282964,76285615	76281802,76282872,76283101,76287286	Gene ID= ENSG00000177679.15 TPM= 2.12 Transcript Type= NA
chr7	76282573	76287287	76282573	76287287	+	transcript2800.chr7.nnic@SRRM3	transcript2800.chr7.nnic	protein_coding	76282573,76282964,76283524,76285615	76282872,76283101,76283621,76287287	Gene ID= ENSG00000177679.15 TPM= 4.25 Transcript Type= NA
chr7	76282614	76287288	76282614	76287288	+	ENST00000612155.1@SRRM3	ENST00000612155.1	protein_coding	76282614,76282964,76283524,76285615	76282872,76283101,76283602,76287288	Gene ID= ENSG00000177679.15 TPM= 18.06 Transcript Type= retained_intron
chr7	76302544	76304295	76302544	76304295	+	ENST00000248553.6@HSPB1	ENST00000248553.6	protein_coding	76302544,76303802,76303984	76303076,76303865,76304295	Gene ID= ENSG00000106211.8 TPM= 3681.9 Transcript Type= protein_coding
chr7	76302688	76304260	76302688	76304260	+	ENST00000447574.1@HSPB1	ENST00000447574.1	protein_coding	76302688,76303984	76303865,76304260	Gene ID= ENSG00000106211.8 TPM= 18.06 Transcript Type= nonsense_mediated_decay
chr7	76326794	76359031	76326794	76359031	-	ENST00000307630.4@YWHAG	ENST00000307630.4	protein_coding	76358722,76326794	76359031,76330233	Gene ID= ENSG00000170027.6 TPM= 61.61 Transcript Type= protein_coding
chr7	76389334	76409695	76389334	76409695	-	ENST00000275560.3@SSC4D	ENST00000275560.3	protein_coding	76409414,76404307,76401008,76400286,76398720,76397518,76395253,76393830,76393405,76391964,76389334	76409695,76404505,76401043,76400591,76398797,76397832,76395330,76393904,76393716,76392041,76390375	Gene ID= ENSG00000146700.8 TPM= 1.06 Transcript Type= protein_coding
chr7	76625704	76627294	76625704	76627294	-	transcript2844.chr7.nic@POMZP3	transcript2844.chr7.nic	protein_coding	76626708,76625704	76627294,76626215	Gene ID= ENSG00000146707.14 TPM= 2.12 Transcript Type= NA
chr7	76609986	76627241	76609986	76627241	-	ENST00000310842.8@POMZP3	ENST00000310842.8	protein_coding	76626708,76626000,76625522,76618183,76611722,76611454,76609986	76627241,76626215,76625683,76618300,76611813,76611591,76610215	Gene ID= ENSG00000146707.14 TPM= 13.81 Transcript Type= protein_coding
chr7	76980949	77023761	76980949	77023761	+	ENST00000584900.5@DTX2P1-UPK3BP1-PMS2P11	ENST00000584900.5	processed_transcript	76980949,76990269,77000309,77002163,77004218,77005550,77011880,77013912,77015672,77018909,77023594	76981260,76990369,77000388,77002321,77004307,77005775,77012019,77013998,77015855,77018997,77023761	Gene ID= ENSG00000265479.6 TPM= 1.06 Transcript Type= processed_transcript
chr7	77001755	77003014	77001755	77003014	-	transcript2847.chr7.nnic@NA	transcript2847.chr7.nnic	NA	77001755	77003014	Gene ID= novel_gene_chr7_2848 TPM= 4.25 Transcript Type= NA
chr7	77193371	77199826	77193371	77199826	-	ENST00000248598.5@FGL2	ENST00000248598.5	protein_coding	77199181,77193371	77199826,77196985	Gene ID= ENSG00000127951.6 TPM= 3.19 Transcript Type= protein_coding
chr7	77380008	77416413	77380008	77416413	-	transcript2863.chr7.nic@GSAP	transcript2863.chr7.nic	protein_coding	77416213,77406029,77404559,77397346,77396982,77387360,77382574,77380008	77416413,77406105,77404615,77397415,77397035,77387448,77382643,77381354	Gene ID= ENSG00000186088.15 TPM= 3.19 Transcript Type= NA
chr7	77537275	77640071	77537275	77640071	+	ENST00000248594.10@PTPN12	ENST00000248594.10	protein_coding	77537275,77571078,77581427,77583555,77585543,77592185,77597842,77600664,77607235,77610765,77610948,77618480,77626705,77632348,77635782,77637018,77638624,77639219	77537645,77571186,77581503,77583650,77585581,77592256,77597901,77600806,77607301,77610842,77611046,77618565,77627675,77632425,77635849,77637048,77638731,77640071	Gene ID= ENSG00000127947.15 TPM= 12.75 Transcript Type= protein_coding
chr7	77683854	77696268	77683854	77696268	-	transcript2873.chr7.nnic@APTR	transcript2873.chr7.nnic	lincRNA	77696118,77685202,77683854	77696268,77685328,77684251	Gene ID= ENSG00000214293.8 TPM= 3.19 Transcript Type= NA
chr7	77696443	77783022	77696443	77783022	+	ENST00000334955.12@RSBN1L	ENST00000334955.12	protein_coding	77696443,77736410,77749424,77765495,77768661,77773147,77778338,77778530	77697055,77736526,77750064,77765632,77768803,77773314,77778446,77783022	Gene ID= ENSG00000187257.15 TPM= 10.62 Transcript Type= protein_coding
chr7	77793728	77798580	77793728	77798580	-	ENST00000257663.3@TMEM60	ENST00000257663.3	protein_coding	77798254,77793728	77798580,77794423	Gene ID= ENSG00000135211.5 TPM= 5.31 Transcript Type= protein_coding
chr7	77798761	77957222	77798761	77957222	+	transcript2877.chr7.nic@PHTF2	transcript2877.chr7.nic	protein_coding	77798761,77840221,77893608,77900711,77901762,77908793,77910245,77920279,77922623,77929109,77937710,77940030,77942700,77949678,77951617,77953769,77954858	77798971,77840300,77893664,77900780,77901920,77908958,77910409,77920465,77922778,77929327,77937838,77940302,77942786,77949833,77951712,77953894,77957222	Gene ID= ENSG00000006576.16 TPM= 3.19 Transcript Type= NA
chr7	77798805	77957225	77798805	77957225	+	ENST00000307305.12@PHTF2	ENST00000307305.12	protein_coding	77798805,77840221,77893608,77900711,77901762,77908793,77910245,77920279,77922623,77929109,77937710,77940030,77940528,77942700,77949678,77951617,77953769,77954858	77798971,77840300,77893664,77900780,77901920,77908958,77910409,77920465,77922778,77929327,77937838,77940302,77940659,77942786,77949833,77951712,77953894,77957225	Gene ID= ENSG00000006576.16 TPM= 6.37 Transcript Type= protein_coding
chr7	77798813	77940459	77798813	77940459	+	ENST00000424760.5@PHTF2	ENST00000424760.5	protein_coding	77798813,77840221,77893608,77900711,77901762,77908793,77910245,77920279,77922623,77929109,77937710,77940030	77798971,77840300,77893664,77900780,77901920,77908958,77910409,77920465,77922778,77929327,77937838,77940459	Gene ID= ENSG00000006576.16 TPM= 1.06 Transcript Type= protein_coding
chr7	79454019	79471200	79454019	79471200	+	transcript2903.chr7.nic@MAGI2-AS3	transcript2903.chr7.nic	processed_transcript	79454019,79458847,79470594,79470783	79454244,79458999,79470679,79471200	Gene ID= ENSG00000234456.7 TPM= 2.12 Transcript Type= NA
chr7	79453960	79471208	79453960	79471208	+	ENST00000414797.5@MAGI2-AS3	ENST00000414797.5	processed_transcript	79453960,79454886,79458847,79470594,79470783	79454244,79455007,79458999,79470679,79471208	Gene ID= ENSG00000234456.7 TPM= 20.18 Transcript Type= antisense_RNA
chr7	80134788	80219402	80134788	80219402	+	ENST00000351004.7@GNAI1	ENST00000351004.7	protein_coding	80134788,80188951,80189090,80199225,80203704,80210969,80212716,80217303	80135278,80188993,80189231,80199382,80203832,80211098,80212869,80219402	Gene ID= ENSG00000127955.15 TPM= 13.81 Transcript Type= protein_coding
chr7	80602144	80679277	80602144	80679277	+	transcript2924.chr7.nic@CD36	transcript2924.chr7.nic	protein_coding	80602144,80646088,80646652,80656540,80661063,80662990,80664406,80666443,80669953,80670977,80671922,80672770,80673355,80673983,80676384	80602379,80646181,80646860,80656700,80661210,80663169,80664497,80666489,80670022,80671164,80672040,80672843,80673409,80674147,80679277	Gene ID= ENSG00000135218.17 TPM= 36.46 Transcript Type= NA
chr7	80624021	80674416	80624021	80674416	+	transcript2944.chr7.nic@CD36	transcript2944.chr7.nic	protein_coding	80624021,80646088,80646652,80656540,80661063,80662990,80664406,80666443,80669953,80670977,80671922,80672770,80673355,80673983	80624190,80646181,80646860,80656700,80661210,80663169,80664497,80666489,80670022,80671164,80672040,80672843,80673409,80674416	Gene ID= ENSG00000135218.17 TPM= 69.78 Transcript Type= NA
chr7	80602207	80674416	80602207	80674416	+	ENST00000534394.5@CD36	ENST00000534394.5	protein_coding	80602207,80656540,80661063,80662990,80664406,80666443,80669953,80670977,80671922,80672770,80673355,80673983	80602379,80656700,80661210,80663169,80664497,80666489,80670022,80671164,80672040,80672843,80673409,80674416	Gene ID= ENSG00000135218.17 TPM= 3.34 Transcript Type= protein_coding
chr7	80602150	80674409	80602150	80674409	+	ENST00000309881.11@CD36	ENST00000309881.11	protein_coding	80602150,80646088,80646652,80656540,80661063,80662990,80664406,80666443,80669953,80670977,80671922,80672770,80673355,80673983	80602379,80646181,80646860,80656700,80661210,80663169,80664497,80666489,80670022,80671164,80672040,80672843,80673409,80674409	Gene ID= ENSG00000135218.17 TPM= 63.97 Transcript Type= protein_coding
chr7	80638676	80677008	80638676	80677008	+	ENST00000447544.6@CD36	ENST00000447544.6	protein_coding	80638676,80646088,80646652,80656540,80661063,80662990,80664406,80666443,80669953,80670977,80671922,80672770,80673355,80673983,80676384	80638746,80646181,80646860,80656700,80661210,80663169,80664497,80666489,80670022,80671164,80672040,80672843,80673409,80674147,80677008	Gene ID= ENSG00000135218.17 TPM= 168.88 Transcript Type= protein_coding
chr7	80638676	80674416	80638676	80674416	+	ENST00000394788.7@CD36	ENST00000394788.7	protein_coding	80638676,80646088,80646652,80656540,80661063,80662990,80664406,80666443,80669953,80670977,80671922,80672770,80673355,80673983	80638746,80646181,80646860,80656700,80661210,80663169,80664497,80666489,80670022,80671164,80672040,80672843,80673409,80674416	Gene ID= ENSG00000135218.17 TPM= 235.48 Transcript Type= protein_coding
chr7	80646329	80674416	80646329	80674416	+	ENST00000432207.5@CD36	ENST00000432207.5	protein_coding	80646329,80646652,80656540,80661063,80662990,80664406,80666443,80669953,80670977,80671922,80672770,80673355,80673983	80646359,80646860,80656700,80661210,80663169,80664497,80666489,80670022,80671164,80672040,80672843,80673409,80674416	Gene ID= ENSG00000135218.17 TPM= 4.99 Transcript Type= protein_coding
chr7	80604352	80607584	80604352	80607584	-	transcript2969.chr7.nnic@NA	transcript2969.chr7.nnic	NA	80604352	80607584	Gene ID= novel_gene_chr7_2970 TPM= 18.06 Transcript Type= NA
chr7	80638643	80641954	80638643	80641954	+	transcript2961.chr7.nnic@NA	transcript2961.chr7.nnic	NA	80638643	80641954	Gene ID= novel_gene_chr7_2962 TPM= 6.37 Transcript Type= NA
chr7	80742538	80919365	80742538	80919365	-	transcript2973.chr7.nic@SEMA3C	transcript2973.chr7.nic	protein_coding	80918828,80916679,80905829,80828585,80827425,80818299,80810611,80805639,80804106,80802665,80800757,80798092,80789306,80765155,80761616,80758331,80751269,80748898,80742538	80919365,80916819,80905916,80828745,80827487,80818418,80810701,80805758,80804248,80802779,80800826,80798236,80789528,80765243,80761657,80758488,80751336,80749028,80745307	Gene ID= ENSG00000075223.13 TPM= 5.31 Transcript Type= NA
chr7	80742538	80919351	80742538	80919351	-	ENST00000265361.7@SEMA3C	ENST00000265361.7	protein_coding	80918828,80916679,80828585,80827425,80818299,80810611,80805639,80804106,80802665,80800757,80798092,80789306,80765155,80761616,80758331,80751269,80748898,80742538	80919351,80916819,80828745,80827487,80818418,80810701,80805758,80804248,80802779,80800826,80798236,80789528,80765243,80761657,80758488,80751336,80749028,80745307	Gene ID= ENSG00000075223.13 TPM= 55.23 Transcript Type= protein_coding
chr7	81946444	82443966	81946444	82443966	-	transcript2984.chr7.nnic@CACNA2D1	transcript2984.chr7.nnic	protein_coding	82443365,82349568,82335135,82170550,82136635,82117044,82084769,82066455,82064304,82060428,82038077,82032797,82014401,82013461,82012154,82007679,82005765,82005423,81997179,81994868,81991185,81984635,81983314,81982567,81974455,81971777,81970675,81969881,81968887,81967596,81967169,81965594,81964207,81964056,81962440,81961894,81959720,81959275,81946444	82443966,82349649,82335251,82170609,82136676,82117173,82084900,82066524,82064354,82060527,82038235,82032901,82014479,82013510,82012243,82007756,82005839,82005497,81997235,81994939,81991246,81984711,81983334,81982627,81974552,81971864,81970737,81969984,81968973,81967663,81967207,81965665,81964359,81964108,81962495,81962023,81959829,81959357,81950508	Gene ID= ENSG00000153956.15 TPM= 4.51 Transcript Type= NA
chr7	82003651	82443966	82003651	82443966	-	transcript2989.chr7.nic@CACNA2D1	transcript2989.chr7.nic	protein_coding	82443365,82349568,82335135,82170550,82136635,82117044,82084769,82066455,82064304,82060428,82038077,82032797,82014401,82013461,82012154,82007679,82005765,82003651	82443966,82349649,82335251,82170609,82136676,82117173,82084900,82066524,82064354,82060527,82038235,82032901,82014479,82013510,82012243,82007756,82005839,82005497	Gene ID= ENSG00000153956.15 TPM= 2.39 Transcript Type= NA
chr7	82297906	82443966	82297906	82443966	-	transcript2998.chr7.nnic@CACNA2D1	transcript2998.chr7.nnic	protein_coding	82443365,82349568,82335135,82297906	82443966,82349649,82335251,82300151	Gene ID= ENSG00000153956.15 TPM= 3.45 Transcript Type= NA
chr7	81946444	82443798	81946444	82443798	-	ENST00000356860.7@CACNA2D1	ENST00000356860.7	protein_coding	82443365,82349568,82335135,82170550,82136635,82117044,82084769,82066455,82064304,82060428,82038077,82032797,82014401,82013461,82012154,82007679,82005765,82005423,81997179,81994868,81991185,81984635,81983314,81982567,81974455,81971777,81970675,81969881,81968887,81967596,81967169,81965594,81964207,81964056,81962440,81961894,81959720,81959275,81946444	82443798,82349649,82335251,82170609,82136676,82117173,82084900,82066524,82064354,82060527,82038235,82032901,82014479,82013510,82012243,82007756,82005839,82005497,81997250,81994939,81991246,81984711,81983334,81982627,81974552,81971864,81970737,81969984,81968973,81967663,81967207,81965665,81964359,81964108,81962495,81962023,81959829,81959357,81950508	Gene ID= ENSG00000153956.15 TPM= 21.24 Transcript Type= protein_coding
chr7	82070923	82072349	82070923	82072349	+	transcript2999.chr7.nnic@NA	transcript2999.chr7.nnic	NA	82070923	82072349	Gene ID= novel_gene_chr7_3000 TPM= 2.12 Transcript Type= NA
chr7	82211200	82213076	82211200	82213076	-	transcript3001.chr7.nnic@NA	transcript3001.chr7.nnic	NA	82211200	82213076	Gene ID= novel_gene_chr7_3002 TPM= 2.12 Transcript Type= NA
chr7	82293292	82294597	82293292	82294597	-	transcript3003.chr7.nnic@NA	transcript3003.chr7.nnic	NA	82293292	82294597	Gene ID= novel_gene_chr7_3004 TPM= 2.12 Transcript Type= NA
chr7	83155902	83162878	83155902	83162878	-	transcript3005.chr7.nic@PCLO	transcript3005.chr7.nic	protein_coding	83162345,83155902	83162878,83156392	Gene ID= ENSG00000186472.19 TPM= 2.12 Transcript Type= NA
chr7	86876906	87059699	86876906	87059699	-	ENST00000450689.6@KIAA1324L	ENST00000450689.6	protein_coding	87059325,86964904,86947727,86944899,86942018,86940010,86938808,86938126,86926736,86925528,86919220,86918442,86914723,86912941,86912072,86909812,86908447,86907670,86897506,86892922,86891724,86876906	87059699,86965024,86947922,86945046,86942104,86940115,86938960,86938214,86926916,86925656,86919310,86918544,86914860,86913204,86912245,86910001,86908543,86907771,86897632,86893100,86891889,86880530	Gene ID= ENSG00000164659.14 TPM= 1.06 Transcript Type= protein_coding
chr7	87152361	87196332	87152361	87196332	+	ENST00000331242.11@DMTF1	ENST00000331242.11	protein_coding	87152361,87163495,87164934,87166483,87170995,87173535,87174593,87179545,87181309,87182228,87184397,87185829,87188092,87190945,87193198,87193725,87194684,87195031	87152555,87163617,87165050,87166605,87171089,87173649,87174669,87179702,87181341,87182337,87184625,87185980,87188301,87191027,87193353,87194102,87194828,87196332	Gene ID= ENSG00000135164.18 TPM= 4.25 Transcript Type= protein_coding
chr7	87196162	87220587	87196162	87220587	-	ENST00000433078.5@TMEM243	ENST00000433078.5	protein_coding	87220361,87219426,87199007,87197941,87196162	87220587,87219718,87199057,87198045,87196758	Gene ID= ENSG00000135185.11 TPM= 4.25 Transcript Type= protein_coding
chr7	87196160	87219733	87196160	87219733	-	ENST00000257637.7@TMEM243	ENST00000257637.7	protein_coding	87219426,87199007,87197941,87196160	87219733,87199057,87198045,87196758	Gene ID= ENSG00000135185.11 TPM= 1.06 Transcript Type= protein_coding
chr7	87218592	87220534	87218592	87220534	-	transcript3020.chr7.nnic@NA	transcript3020.chr7.nnic	NA	87218592	87220534	Gene ID= novel_gene_chr7_3021 TPM= 2.12 Transcript Type= NA
chr7	87325350	87345486	87325350	87345486	-	ENST00000421293.1@TP53TG1	ENST00000421293.1	lincRNA	87345305,87341523,87325350	87345486,87341684,87325444	Gene ID= ENSG00000182165.17 TPM= 5.31 Transcript Type= lincRNA
chr7	87325299	87345515	87325299	87345515	-	ENST00000416560.5@TP53TG1	ENST00000416560.5	lincRNA	87345305,87345043,87341523,87325299	87345515,87345233,87341684,87325444	Gene ID= ENSG00000182165.17 TPM= 3.19 Transcript Type= lincRNA
chr7	87345695	87399795	87345695	87399795	+	ENST00000331536.7@CROT	ENST00000331536.7	protein_coding	87345695,87346340,87349048,87359206,87361390,87361728,87369376,87375632,87375828,87377349,87381910,87382074,87382413,87391589,87392566,87392730,87392948,87398524	87345767,87346430,87349183,87359330,87361571,87361852,87369484,87375725,87375953,87377450,87381993,87382181,87382543,87391712,87392644,87392823,87393067,87399795	Gene ID= ENSG00000005469.11 TPM= 8.5 Transcript Type= protein_coding
chr7	87345693	87360116	87345693	87360116	+	ENST00000412227.6@CROT	ENST00000412227.6	protein_coding	87345693,87346340,87349048,87359206	87345767,87346430,87349183,87360116	Gene ID= ENSG00000005469.11 TPM= 1.06 Transcript Type= protein_coding
chr7	87402045	87475902	87402045	87475902	-	transcript3035.chr7.nnic@ABCB4	transcript3035.chr7.nnic	protein_coding	87475771,87475386,87472621,87462758,87454535,87452944,87451623,87449968,87447034,87444862,87443663,87443319,87440199,87439667,87431404,87426750,87423906,87422121,87419998,87418537,87417312,87413617,87411893,87409236,87408037,87406288,87403135,87402045	87475902,87475471,87472675,87462908,87454592,87453135,87451794,87450092,87447205,87444975,87443773,87443444,87440402,87439837,87431565,87426920,87424052,87422225,87420075,87418620,87417515,87413717,87412033,87409392,87408234,87406494,87403281,87402302	Gene ID= ENSG00000005471.15 TPM= 2.12 Transcript Type= NA
chr7	87472375	87475853	87472375	87475853	-	transcript3042.chr7.nic@ABCB4	transcript3042.chr7.nic	protein_coding	87475634,87472375	87475853,87475471	Gene ID= ENSG00000005471.15 TPM= 2.66 Transcript Type= NA
chr7	87472376	87475902	87472376	87475902	-	transcript3043.chr7.nnic@ABCB4	transcript3043.chr7.nnic	protein_coding	87475771,87472376	87475902,87475471	Gene ID= ENSG00000005471.15 TPM= 3.72 Transcript Type= NA
chr7	87472665	87475720	87472665	87475720	-	transcript3044.chr7.nic@ABCB4	transcript3044.chr7.nic	protein_coding	87475634,87472665	87475720,87475471	Gene ID= ENSG00000005471.15 TPM= 2.12 Transcript Type= NA
chr7	87472665	87475902	87472665	87475902	-	transcript3045.chr7.nnic@ABCB4	transcript3045.chr7.nnic	protein_coding	87475771,87472665	87475902,87475471	Gene ID= ENSG00000005471.15 TPM= 2.12 Transcript Type= NA
chr7	87472745	87475853	87472745	87475853	-	transcript3046.chr7.nic@ABCB4	transcript3046.chr7.nic	protein_coding	87475634,87472745	87475853,87475471	Gene ID= ENSG00000005471.15 TPM= 5.31 Transcript Type= NA
chr7	87628454	87830456	87628454	87830456	+	ENST00000493037.5@RUNDC3B	ENST00000493037.5	protein_coding	87628454,87650822,87700421,87710570,87739791,87741499,87770581,87777798,87816141,87829885	87628945,87650937,87700554,87710655,87739880,87741579,87770749,87777955,87816262,87830456	Gene ID= ENSG00000105784.15 TPM= 1.06 Transcript Type= protein_coding
chr7	87834504	87876376	87834504	87876376	-	transcript3055.chr7.nic@SLC25A40	transcript3055.chr7.nic	protein_coding	87876096,87860572,87860072,87858631,87856292,87854204,87849881,87847853,87846949,87843754,87841633,87836730,87834504	87876376,87860640,87860169,87858751,87856351,87854310,87849948,87847977,87847122,87843863,87841714,87836810,87836361	Gene ID= ENSG00000075303.12 TPM= 4.78 Transcript Type= NA
chr7	87834504	87876323	87834504	87876323	-	transcript3063.chr7.nic@SLC25A40	transcript3063.chr7.nic	protein_coding	87876096,87860572,87858631,87856292,87854204,87849881,87847853,87846949,87843754,87841633,87836730,87834504	87876323,87860640,87858751,87856389,87854310,87849948,87847977,87847122,87843863,87841714,87836810,87836361	Gene ID= ENSG00000075303.12 TPM= 2.66 Transcript Type= NA
chr7	87876229	87909541	87876229	87909541	+	ENST00000265728.5@DBF4	ENST00000265728.5	protein_coding	87876229,87878053,87884979,87886844,87887329,87887983,87896474,87897294,87900221,87900764,87904292,87907188	87876778,87878225,87885158,87886894,87887398,87888059,87896510,87897339,87900349,87900878,87904416,87909541	Gene ID= ENSG00000006634.7 TPM= 2.12 Transcript Type= protein_coding
chr7	88205118	88220079	88205118	88220079	-	ENST00000265729.6@SRI	ENST00000265729.6	protein_coding	88219976,88218859,88217122,88210882,88209983,88209339,88208507,88205118	88220079,88218942,88217191,88210925,88210130,88209452,88208565,88206504	Gene ID= ENSG00000075142.13 TPM= 62.67 Transcript Type= protein_coding
chr7	88276429	88306893	88276429	88306893	-	transcript3083.chr7.nic@STEAP4	transcript3083.chr7.nic	protein_coding	88306792,88290916,88283814,88282641,88280915,88276429	88306893,88291014,88284271,88283168,88281079,88279628	Gene ID= ENSG00000127954.12 TPM= 5.31 Transcript Type= NA
chr7	90211686	90237678	90211686	90237678	+	ENST00000394621.6@STEAP2	ENST00000394621.6	protein_coding	90211686,90216491,90225050,90226971,90229872,90232337	90212045,90216603,90225574,90227498,90230036,90237678	Gene ID= ENSG00000157214.13 TPM= 15.4 Transcript Type= protein_coding
chr7	90211686	90237631	90211686	90237631	+	ENST00000287908.7@STEAP2	ENST00000287908.7	protein_coding	90211686,90225050,90226971,90229872,90232337	90212045,90225574,90227498,90230036,90237631	Gene ID= ENSG00000157214.13 TPM= 14.34 Transcript Type= protein_coding
chr7	90346665	90385890	90346665	90385890	+	ENST00000257659.12@GTPBP10	ENST00000257659.12	protein_coding	90346665,90352816,90372155,90374302,90377507,90378134,90382956,90384892	90346774,90353009,90372228,90374354,90377614,90378211,90383079,90385890	Gene ID= ENSG00000105793.15 TPM= 1.06 Transcript Type= protein_coding
chr7	90403386	90415954	90403386	90415954	+	ENST00000287916.8@CLDN12	ENST00000287916.8	protein_coding	90403386,90405519,90412644	90403549,90405608,90415954	Gene ID= ENSG00000157224.15 TPM= 4.78 Transcript Type= protein_coding
chr7	90403467	90415954	90403467	90415954	+	ENST00000394605.2@CLDN12	ENST00000394605.2	protein_coding	90403467,90405519,90412644	90403549,90405612,90415954	Gene ID= ENSG00000157224.15 TPM= 2.66 Transcript Type= protein_coding
chr7	91264364	91271326	91264364	91271326	+	ENST00000287934.3@FZD1	ENST00000287934.3	protein_coding	91264364	91271326	Gene ID= ENSG00000157240.3 TPM= 15.93 Transcript Type= protein_coding
chr7	91800991	91880714	91800991	91880714	-	transcript3124.chr7.nnic@MTERF1	transcript3124.chr7.nnic	protein_coding	91880657,91880055,91827415,91800991	91880714,91880113,91827480,91801268	Gene ID= ENSG00000127989.13 TPM= 3.19 Transcript Type= NA
chr7	91872891	91880720	91872891	91880720	-	ENST00000351870.7@MTERF1	ENST00000351870.7	protein_coding	91880657,91880055,91872891	91880720,91880113,91874764	Gene ID= ENSG00000127989.13 TPM= 6.37 Transcript Type= protein_coding
chr7	91887365	91889711	91887365	91889711	+	transcript3129.chr7.nnic@NA	transcript3129.chr7.nnic	NA	91887365	91889711	Gene ID= novel_gene_chr7_3130 TPM= 7.44 Transcript Type= NA
chr7	91940858	92002095	91940858	92002095	+	transcript3138.chr7.nic@AKAP9	transcript3138.chr7.nic	protein_coding	91940858,91973711,91980289,91992158,91992885,91994621,91995603,92000848	91941147,91973968,91980333,91992211,91993055,91994776,91995800,92002095	Gene ID= ENSG00000127914.16 TPM= 7.65 Transcript Type= NA
chr7	92102696	92110668	92102696	92110668	+	transcript3151.chr7.nic@AKAP9	transcript3151.chr7.nic	protein_coding	92102696,92105678,92107293,92108494,92110122	92102826,92105763,92107422,92108633,92110668	Gene ID= ENSG00000127914.16 TPM= 2.12 Transcript Type= NA
chr7	92070138	92109061	92070138	92109061	+	ENST00000394534.6@AKAP9	ENST00000394534.6	protein_coding	92070138,92070905,92076855,92077696,92079079,92082522,92083170,92084640,92084819,92085495,92086228,92089385,92093097,92095023,92096689,92097586,92098109,92099687,92100856,92102594,92105678,92107293,92108494	92070182,92071009,92077007,92077875,92080152,92082662,92083655,92084703,92084940,92085686,92086416,92089529,92093316,92095173,92097357,92097794,92098214,92099869,92101056,92102826,92105763,92107422,92109061	Gene ID= ENSG00000127914.16 TPM= 1.06 Transcript Type= protein_coding
chr7	92112151	92134530	92112151	92134530	-	ENST00000003100.12@CYP51A1	ENST00000003100.12	protein_coding	92134173,92131774,92128880,92127505,92126253,92123734,92123120,92118520,92117044,92112151	92134530,92131872,92129056,92127631,92126427,92123853,92123315,92118615,92117212,92113843	Gene ID= ENSG00000001630.15 TPM= 81.79 Transcript Type= protein_coding
chr7	92246234	92401384	92246234	92401384	+	ENST00000265742.7@ANKIB1	ENST00000265742.7	protein_coding	92246234,92294889,92307359,92319330,92327783,92343024,92344978,92350950,92352476,92362185,92371477,92386509,92387798,92387975,92389971,92391166,92392241,92396365,92397723,92398212	92246519,92295166,92307656,92319512,92327900,92343232,92345066,92351094,92352642,92362273,92371607,92386643,92387884,92388041,92390116,92391344,92392292,92396476,92397859,92401384	Gene ID= ENSG00000001629.9 TPM= 6.37 Transcript Type= protein_coding
chr7	92487020	92528531	92487020	92528531	-	ENST00000248633.8@PEX1	ENST00000248633.8	protein_coding	92528307,92522102,92518995,92518141,92517276,92513848,92511580,92510944,92509329,92506994,92506248,92504732,92503041,92501890,92501507,92499704,92496713,92494487,92494293,92492953,92491272,92489714,92489293,92487020	92528531,92522245,92519078,92518255,92518042,92513967,92511703,92511047,92509411,92507126,92506344,92504902,92503195,92502079,92501673,92499838,92496777,92494629,92494396,92493129,92491502,92489911,92489423,92487541	Gene ID= ENSG00000127980.15 TPM= 15.93 Transcript Type= protein_coding
chr7	92517178	92521210	92517178	92521210	-	transcript3184.chr7.nnic@NA	transcript3184.chr7.nnic	NA	92517178	92521210	Gene ID= novel_gene_chr7_3185 TPM= 2.12 Transcript Type= NA
chr7	92528773	92537534	92528773	92537534	+	ENST00000265732.9@RBM48	ENST00000265732.9	protein_coding	92528773,92529476,92532404,92534402,92536851	92528924,92529666,92532549,92534970,92537534	Gene ID= ENSG00000127993.15 TPM= 12.75 Transcript Type= protein_coding
chr7	92528773	92538005	92528773	92538005	+	ENST00000481551.5@RBM48	ENST00000481551.5	protein_coding	92528773,92529476,92532404,92534402	92528924,92529666,92532549,92538005	Gene ID= ENSG00000127993.15 TPM= 1.06 Transcript Type= protein_coding
chr7	92568525	92590394	92568525	92590394	-	transcript3196.chr7.nic@FAM133B	transcript3196.chr7.nic	protein_coding	92590268,92581506,92579317,92578319,92577655,92577103,92575771,92568525	92590394,92581603,92579395,92578393,92578182,92577195,92575821,92569915	Gene ID= ENSG00000234545.7 TPM= 2.12 Transcript Type= NA
chr7	93099516	93118023	93099516	93118023	-	ENST00000379958.2@SAMD9	ENST00000379958.2	protein_coding	93117863,93114795,93099516	93118023,93114895,93106105	Gene ID= ENSG00000205413.7 TPM= 1.06 Transcript Type= protein_coding
chr7	93232340	93359026	93232340	93359026	+	ENST00000305866.9@VPS50	ENST00000305866.9	protein_coding	93232340,93239866,93252653,93253860,93256509,93257394,93258159,93258357,93259550,93271220,93272635,93276165,93291703,93294545,93296742,93297145,93303460,93305828,93308824,93311166,93323611,93334117,93341427,93348711,93349875,93353640,93355891,93358317	93232500,93239934,93252775,93253931,93256562,93257464,93258276,93258392,93259632,93271262,93272733,93276305,93291835,93294636,93296836,93297243,93303550,93306004,93308942,93311272,93323732,93334197,93341575,93348807,93350033,93353761,93356080,93359026	Gene ID= ENSG00000004766.15 TPM= 8.5 Transcript Type= protein_coding
chr7	93885397	93890991	93885397	93890991	-	ENST00000222543.9@TFPI2	ENST00000222543.9	protein_coding	93890591,93890137,93889035,93887261,93885397	93890991,93890319,93889223,93887431,93886896	Gene ID= ENSG00000105825.11 TPM= 1.06 Transcript Type= protein_coding
chr7	93921699	93928610	93921699	93928610	+	ENST00000248564.5@GNG11	ENST00000248564.5	protein_coding	93921699,93926091	93922233,93928610	Gene ID= ENSG00000127920.5 TPM= 62.67 Transcript Type= protein_coding
chr7	93993242	94004375	93993242	94004375	-	ENST00000222547.7@BET1	ENST00000222547.7	protein_coding	94004198,93999170,93996265,93993242	94004375,93999294,93996321,93994385	Gene ID= ENSG00000105829.11 TPM= 4.25 Transcript Type= protein_coding
chr7	94394561	94431232	94394561	94431232	+	ENST00000297268.10@COL1A2	ENST00000297268.10	protein_coding	94394561,94397748,94398382,94399049,94400196,94401567,94404556,94404693,94404839,94405199,94405673,94406250,94407847,94408183,94408336,94408770,94409322,94409564,94409723,94410242,94410420,94410889,94411056,94412068,94412584,94413083,94413690,94413894,94414222,94415226,94416405,94417724,94418499,94419498,94420233,94420391,94420541,94421009,94421899,94422957,94424336,94425117,94425610,94425750,94425998,94426423,94427008,94427188,94427627,94428293,94429188,94430247	94395101,94397758,94398396,94399084,94400288,94401620,94404600,94404746,94404892,94405252,94405726,94406303,94407891,94408236,94408380,94408823,94409420,94409608,94409821,94410295,94410527,94410942,94411154,94412121,94412682,94413136,94413743,94413947,94414275,94415270,94416503,94417831,94418552,94419551,94420286,94420444,94420648,94421062,94421952,94423118,94424443,94425224,94425663,94425857,94426051,94426530,94427061,94427295,94427885,94428477,94429430,94431232	Gene ID= ENSG00000164692.17 TPM= 44.61 Transcript Type= protein_coding
chr7	94394914	94430703	94394914	94430703	+	ENST00000620463.1@COL1A2	ENST00000620463.1	protein_coding	94394914,94398374,94398382,94399049,94400196,94401567,94404556,94404693,94404839,94405199,94405673,94406250,94407847,94408183,94408336,94408770,94409322,94409564,94409723,94410242,94410420,94410889,94411056,94412068,94412584,94413083,94413690,94413894,94414222,94415226,94416405,94417724,94418499,94419498,94420233,94420391,94420541,94421009,94421899,94422957,94424336,94425117,94425610,94425750,94425998,94426423,94427008,94427188,94427627,94428293,94429188,94430247	94395101,94398378,94398396,94399084,94400288,94401620,94404600,94404746,94404892,94405252,94405726,94406303,94407891,94408236,94408380,94408823,94409420,94409608,94409821,94410295,94410527,94410942,94411154,94412121,94412682,94413136,94413743,94413947,94414275,94415270,94416503,94417831,94418552,94419551,94420286,94420444,94420648,94421062,94421952,94423118,94424443,94425224,94425663,94425857,94426051,94426530,94427061,94427295,94427885,94428477,94429430,94430703	Gene ID= ENSG00000164692.17 TPM= 91.35 Transcript Type= protein_coding
chr7	94509800	94557019	94509800	94557019	+	transcript3222.chr7.nnic@CASD1	transcript3222.chr7.nnic	protein_coding	94509800,94517560,94518203,94522845,94527162,94528188,94533205,94533679,94535309,94537472,94538967,94544411,94545545,94547096,94549533,94551338,94552350,94554483,94555492	94510217,94517656,94518323,94523040,94527206,94528250,94533249,94533802,94535523,94537894,94539056,94544530,94545701,94547175,94549634,94551478,94552427,94554575,94557019	Gene ID= ENSG00000127995.16 TPM= 4.25 Transcript Type= NA
chr7	94509798	94557019	94509798	94557019	+	ENST00000297273.8@CASD1	ENST00000297273.8	protein_coding	94509798,94517560,94518203,94527162,94528188,94533205,94533679,94535309,94537472,94538967,94544411,94545545,94547096,94549533,94551338,94552350,94554483,94555492	94510217,94517656,94518323,94527206,94528250,94533249,94533802,94535523,94537894,94539056,94544530,94545701,94547175,94549634,94551478,94552427,94554575,94557019	Gene ID= ENSG00000127995.16 TPM= 18.06 Transcript Type= protein_coding
chr7	94509800	94528900	94509800	94528900	+	transcript3242.chr7.nic@CASD1	transcript3242.chr7.nic	protein_coding	94509800,94517560,94518203,94527162,94528188	94510217,94517656,94518323,94527206,94528900	Gene ID= ENSG00000127995.16 TPM= 3.19 Transcript Type= NA
chr7	94585230	94656186	94585230	94656186	-	transcript3235.chr7.nnic@SGCE	transcript3235.chr7.nnic	protein_coding	94655990,94629719,94628202,94623325,94622546,94618758,94603290,94600646,94599697,94598775,94588689,94585230	94656186,94629841,94628359,94623397,94622626,94618956,94603452,94600857,94599723,94598963,94588732,94585515	Gene ID= ENSG00000127990.15 TPM= 9.38 Transcript Type= NA
chr7	94585230	94656209	94585230	94656209	-	ENST00000265735.11@SGCE	ENST00000265735.11	protein_coding	94655990,94629719,94628202,94623325,94618758,94603290,94600646,94599697,94598775,94588689,94585230	94656209,94629841,94628359,94623397,94618956,94603452,94600857,94599723,94598963,94588732,94585515	Gene ID= ENSG00000127990.15 TPM= 25.31 Transcript Type= protein_coding
chr7	94585248	94656124	94585248	94656124	-	ENST00000445866.6@SGCE	ENST00000445866.6	protein_coding	94655990,94629719,94628202,94623325,94618758,94603290,94600646,94599697,94598775,94597930,94588689,94585248	94656124,94629841,94628359,94623397,94618956,94603452,94600857,94599723,94598963,94598004,94588732,94585515	Gene ID= ENSG00000127990.15 TPM= 1.41 Transcript Type= protein_coding
chr7	94585250	94656166	94585250	94656166	-	ENST00000437425.6@SGCE	ENST00000437425.6	protein_coding	94655990,94628202,94623325,94618758,94603290,94600646,94599697,94598775,94588689,94585250	94656166,94628359,94623397,94618956,94603452,94600857,94599723,94598963,94588732,94585515	Gene ID= ENSG00000127990.15 TPM= 1.06 Transcript Type= protein_coding
chr7	94907667	95251791	94907667	95251791	+	transcript3248.chr7.nic@PPP1R9A	transcript3248.chr7.nic	protein_coding	94907667,94909898,95111259,95120712,95161867,95198349,95225961,95247473,95250026,95251762	94907702,94911508,95111391,95120832,95161971,95198484,95226116,95247526,95250255,95251791	Gene ID= ENSG00000158528.11 TPM= 4.25 Transcript Type= NA
chr7	94907676	95251791	94907676	95251791	+	transcript3249.chr7.nic@PPP1R9A	transcript3249.chr7.nic	protein_coding	94907676,94909898,95111259,95120712,95161867,95198349,95225961,95247473,95250026,95251762	94908139,94911508,95111391,95120832,95161971,95198484,95226116,95247526,95250255,95251791	Gene ID= ENSG00000158528.11 TPM= 9.56 Transcript Type= NA
chr7	95404863	95434989	95404863	95434989	-	transcript3261.chr7.nnic@PON2	transcript3261.chr7.nnic	protein_coding	95434878,95424515,95416172,95412312,95411653,95409901,95406987,95406119,95404863	95434989,95424585,95416297,95412451,95411779,95410101,95407068,95406247,95405488	Gene ID= ENSG00000105854.12 TPM= 3.19 Transcript Type= NA
chr7	95404863	95435072	95404863	95435072	-	ENST00000633531.1@PON2	ENST00000633531.1	protein_coding	95434878,95424515,95416242,95412312,95411653,95409901,95406987,95406119,95404863	95435072,95424585,95416297,95412477,95411779,95410101,95407068,95406247,95405488	Gene ID= ENSG00000105854.12 TPM= 55.23 Transcript Type= protein_coding
chr7	95407190	95435067	95407190	95435067	-	transcript3269.chr7.nic@PON2	transcript3269.chr7.nic	protein_coding	95434878,95424515,95416242,95412312,95411653,95407190	95435067,95424585,95416297,95412477,95411779,95410101	Gene ID= ENSG00000105854.12 TPM= 2.12 Transcript Type= NA
chr7	95485901	95540232	95485901	95540232	+	ENST00000325885.5@ASB4	ENST00000325885.5	protein_coding	95485901,95495758,95527813,95536437,95537571	95486158,95496057,95528303,95536550,95540232	Gene ID= ENSG00000005981.12 TPM= 1.06 Transcript Type= protein_coding
chr7	95583499	95596491	95583499	95596491	-	ENST00000005178.5@PDK4	ENST00000005178.5	protein_coding	95596164,95595023,95593699,95592760,95592511,95591988,95589640,95587727,95587418,95587010,95583499	95596491,95595164,95593770,95592944,95592597,95592065,95589716,95587825,95587528,95587123,95585781	Gene ID= ENSG00000004799.7 TPM= 46.74 Transcript Type= protein_coding
chr7	95594432	95596514	95594432	95596514	-	transcript3281.chr7.nnic@NA	transcript3281.chr7.nnic	NA	95594432	95596514	Gene ID= novel_gene_chr7_3282 TPM= 7.44 Transcript Type= NA
chr7	95596682	95607144	95596682	95607144	+	ENST00000416502.5@AC002451.1	ENST00000416502.5	antisense_RNA	95596682,95606940	95596783,95607144	Gene ID= ENSG00000231170.5 TPM= 1.06 Transcript Type= antisense_RNA
chr7	95772598	96098424	95772598	96098424	+	ENST00000359388.8@DYNC1I1	ENST00000359388.8	protein_coding	95772598,95804721,95810392,95813247,95869883,95977512,95984815,95987056,95995948,96028175,96032667,96035619,96039277,96076057,96080363,96097483	95772773,95804837,95810506,95813337,95869998,95977601,95984977,95987155,95996073,96028321,96032780,96035752,96039421,96076197,96080488,96098424	Gene ID= ENSG00000158560.14 TPM= 30.27 Transcript Type= protein_coding
chr7	95772554	96098424	95772554	96098424	+	ENST00000447467.6@DYNC1I1	ENST00000447467.6	protein_coding	95772554,95804721,95810392,95813247,95828057,95869883,95977512,95984815,95987056,95995948,96028175,96032667,96035619,96039277,96076057,96080363,96097483	95772773,95804837,95810506,95813337,95828116,95869998,95977601,95984977,95987155,95996073,96028321,96032780,96035752,96039421,96076197,96080488,96098424	Gene ID= ENSG00000158560.14 TPM= 44.08 Transcript Type= protein_coding
chr7	95772590	96098412	95772590	96098412	+	ENST00000324972.10@DYNC1I1	ENST00000324972.10	protein_coding	95772590,95804721,95810392,95813196,95828057,95869883,95977512,95984815,95987056,95995948,96028175,96032667,96035619,96039277,96076057,96080363,96097483	95772773,95804837,95810506,95813337,95828116,95869998,95977601,95984977,95987155,95996073,96028321,96032780,96035752,96039421,96076197,96080488,96098412	Gene ID= ENSG00000158560.14 TPM= 1.06 Transcript Type= protein_coding
chr7	96120221	96322147	96120221	96322147	-	ENST00000416240.6@SLC25A13	ENST00000416240.6	protein_coding	96321942,96296898,96277196,96234802,96208838,96193037,96191109,96189581,96189294,96184927,96184277,96171472,96170045,96146556,96131743,96121839,96121655,96120221	96322147,96296951,96277338,96234917,96208977,96193183,96191247,96189674,96189378,96185014,96184435,96171524,96170125,96146696,96131881,96121997,96121745,96121377	Gene ID= ENSG00000004864.13 TPM= 1.06 Transcript Type= protein_coding
chr7	96183148	96189570	96183148	96189570	-	transcript3309.chr7.nic@SLC25A13	transcript3309.chr7.nic	protein_coding	96189294,96183148	96189570,96185014	Gene ID= ENSG00000004864.13 TPM= 2.12 Transcript Type= NA
chr7	96120220	96322093	96120220	96322093	-	ENST00000265631.9@SLC25A13	ENST00000265631.9	protein_coding	96321942,96296898,96277196,96234802,96208838,96193037,96191109,96189581,96189294,96184927,96184277,96171472,96170045,96146556,96131743,96121839,96121655,96120220	96322093,96296951,96277338,96234917,96208977,96193183,96191247,96189674,96189378,96185011,96184435,96171524,96170125,96146696,96131881,96121997,96121745,96121377	Gene ID= ENSG00000004864.13 TPM= 1.06 Transcript Type= protein_coding
chr7	96687951	96709891	96687951	96709891	-	ENST00000248566.3@SEM1	ENST00000248566.3	protein_coding	96709688,96694798,96687951	96709891,96694891,96688966	Gene ID= ENSG00000127922.9 TPM= 2.12 Transcript Type= protein_coding
chr7	97116590	97181763	97116590	97181763	+	ENST00000432641.2@SDHAF3	ENST00000432641.2	protein_coding	97116590,97181012	97117897,97181763	Gene ID= ENSG00000196636.7 TPM= 22.31 Transcript Type= protein_coding
chr7	97852131	97872471	97852131	97872471	-	ENST00000394308.7@ASNS	ENST00000394308.7	protein_coding	97872351,97869778,97868908,97864259,97859213,97858854,97858278,97856690,97855353,97854580,97853305,97853060,97852131	97872471,97869813,97869179,97864496,97859398,97858955,97858405,97856816,97855459,97854680,97853386,97853215,97852468	Gene ID= ENSG00000070669.16 TPM= 22.31 Transcript Type= protein_coding
chr7	97966595	97972364	97966595	97972364	-	transcript3333.chr7.nnic@AC079781.5	transcript3333.chr7.nnic	processed_transcript	97972135,97969770,97966595	97972364,97969845,97966977	Gene ID= ENSG00000284707.1 TPM= 3.19 Transcript Type= NA
chr7	97966411	97972364	97966411	97972364	-	transcript3327.chr7.nnic@AC004967.1	transcript3327.chr7.nnic	transcribed_unprocessed_pseudogene	97972135,97969770,97969005,97966411	97972364,97969845,97969052,97966977	Gene ID= ENSG00000243554.1 TPM= 11.15 Transcript Type= NA
chr7	98106885	98209633	98106885	98209633	+	ENST00000297293.5@LMTK2	ENST00000297293.5	protein_coding	98106885,98137315,98141397,98151382,98154758,98159338,98171541,98185051,98186877,98190728,98191614,98203574,98203944,98205464	98107280,98137442,98141541,98151455,98154876,98159425,98171674,98185135,98186998,98190877,98194572,98203706,98204186,98209633	Gene ID= ENSG00000164715.5 TPM= 41.42 Transcript Type= protein_coding
chr7	98214624	98252251	98214624	98252251	-	ENST00000447648.6@TECPR1	ENST00000447648.6	protein_coding	98252126,98251394,98245922,98244885,98244571,98243467,98241070,98240851,98238509,98236776,98233421,98232827,98231804,98231224,98230961,98229039,98228014,98225006,98224801,98223662,98222990,98222386,98221661,98217936,98217692,98214624	98252251,98251548,98246165,98245067,98244693,98243592,98241244,98240951,98238610,98236921,98233911,98232972,98231959,98231373,98231118,98229166,98228116,98225102,98224880,98223718,98223170,98222521,98221753,98218042,98217811,98217503	Gene ID= ENSG00000205356.9 TPM= 2.12 Transcript Type= protein_coding
chr7	98281675	98291524	98281675	98291524	+	ENST00000297290.3@BRI3	ENST00000297290.3	protein_coding	98281675,98282351,98291111	98281937,98282453,98291524	Gene ID= ENSG00000164713.9 TPM= 49.92 Transcript Type= protein_coding
chr7	98271584	98272984	98271584	98272984	-	transcript3349.chr7.nnic@NA	transcript3349.chr7.nnic	NA	98271584	98272984	Gene ID= novel_gene_chr7_3350 TPM= 2.12 Transcript Type= NA
chr7	99009881	99011477	99009881	99011477	-	transcript3363.chr7.nnic@NA	transcript3363.chr7.nnic	NA	99011346,99009881	99011477,99011260	Gene ID= novel_gene_chr7_3364 TPM= 4.25 Transcript Type= NA
chr7	99017883	99019657	99017883	99019657	-	transcript3366.chr7.nnic@NA	transcript3366.chr7.nnic	NA	99017883	99019657	Gene ID= novel_gene_chr7_3367 TPM= 4.25 Transcript Type= NA
chr7	99030312	99144121	99030312	99144121	-	transcript3352.chr7.nnic@SMURF1	transcript3352.chr7.nnic	protein_coding	99143726,99061799,99060599,99057418,99057205,99054790,99052205,99051357,99049563,99047684,99045698,99042118,99040378,99038388,99037067,99035515,99033037,99030312	99144121,99061837,99060707,99057551,99057270,99054865,99052446,99051441,99049709,99047882,99045801,99042232,99040556,99038525,99037187,99035716,99033112,99030683	Gene ID= ENSG00000198742.9 TPM= 5.31 Transcript Type= NA
chr7	99325910	99366257	99325910	99366257	+	ENST00000262942.9@ARPC1A	ENST00000262942.9	protein_coding	99325910,99333325,99338181,99344293,99348852,99353909,99358340,99359545,99363543,99365891	99326004,99333417,99338285,99344515,99348959,99354121,99358415,99359738,99363633,99366257	Gene ID= ENSG00000241685.9 TPM= 210.31 Transcript Type= protein_coding
chr7	99374675	99394801	99374675	99394801	+	ENST00000252725.9@ARPC1B	ENST00000252725.9	protein_coding	99374675,99385702,99386685,99388039,99389905,99390893,99391178,99392671,99394029,99394451	99374781,99385778,99386789,99388261,99390012,99391099,99391253,99392876,99394119,99394801	Gene ID= ENSG00000130429.12 TPM= 67.98 Transcript Type= protein_coding
chr7	99394963	99408829	99394963	99408829	-	ENST00000350498.7@PDAP1	ENST00000350498.7	protein_coding	99408536,99404862,99403398,99400303,99397862,99394963	99408829,99404953,99403505,99400424,99398013,99396740	Gene ID= ENSG00000106244.12 TPM= 80.72 Transcript Type= protein_coding
chr7	99403511	99408548	99403511	99408548	-	ENST00000626285.1@PDAP1	ENST00000626285.1	protein_coding	99408536,99404862,99403511	99408548,99404953,99403525	Gene ID= ENSG00000106244.12 TPM= 2.12 Transcript Type= protein_coding
chr7	99408641	99419616	99408641	99419616	+	ENST00000403633.6@BUD31	ENST00000403633.6	protein_coding	99408641,99410034,99411064,99416138,99417429,99419391	99409004,99410169,99411186,99416260,99417595,99419616	Gene ID= ENSG00000106245.10 TPM= 41.96 Transcript Type= protein_coding
chr7	99408978	99419608	99408978	99419608	+	ENST00000222969.9@BUD31	ENST00000222969.9	protein_coding	99408978,99410034,99411064,99416138,99417429,99419391	99409245,99410169,99411186,99416260,99417595,99419608	Gene ID= ENSG00000106245.10 TPM= 19.65 Transcript Type= protein_coding
chr7	99416739	99438916	99416739	99438916	-	ENST00000292478.8@PTCD1	ENST00000292478.8	protein_coding	99438692,99434790,99433278,99429588,99429103,99424795,99423775,99416739	99438916,99435268,99433418,99429806,99429204,99425616,99423957,99420149	Gene ID= ENSG00000106246.17 TPM= 9.56 Transcript Type= protein_coding
chr7	99438933	99457371	99438933	99457371	+	transcript3388.chr7.nnic@CPSF4	transcript3388.chr7.nnic	protein_coding	99438933,99444789,99448121,99450276,99450702,99452353,99453966,99456432	99439185,99444839,99448273,99450371,99450795,99452440,99454136,99457371	Gene ID= ENSG00000160917.14 TPM= 2.66 Transcript Type= NA
chr7	99438922	99457342	99438922	99457342	+	ENST00000436336.6@CPSF4	ENST00000436336.6	protein_coding	99438922,99444789,99448121,99450276,99450702,99452368,99454041,99456432	99439185,99444839,99448273,99450371,99450795,99452440,99454136,99457342	Gene ID= ENSG00000160917.14 TPM= 25.49 Transcript Type= protein_coding
chr7	99439073	99457371	99439073	99457371	+	ENST00000292476.9@CPSF4	ENST00000292476.9	protein_coding	99439073,99444789,99448121,99450276,99450702,99452368,99453966,99456432	99439185,99444839,99448273,99450371,99450795,99452440,99454136,99457371	Gene ID= ENSG00000160917.14 TPM= 2.66 Transcript Type= protein_coding
chr7	99458195	99466331	99458195	99466331	-	ENST00000292475.7@ATP5J2	ENST00000292475.7	protein_coding	99466111,99460086,99459147,99458195	99466331,99460193,99459263,99458355	Gene ID= ENSG00000241468.7 TPM= 81.79 Transcript Type= protein_coding
chr7	99458197	99466167	99458197	99466167	-	ENST00000488775.5@ATP5J2	ENST00000488775.5	protein_coding	99466129,99460086,99458197	99466167,99460193,99458355	Gene ID= ENSG00000241468.7 TPM= 17.35 Transcript Type= protein_coding
chr7	99458195	99466164	99458195	99466164	-	ENST00000359832.8@ATP5J2	ENST00000359832.8	protein_coding	99466111,99460086,99458195	99466164,99460193,99458355	Gene ID= ENSG00000241468.7 TPM= 6.72 Transcript Type= protein_coding
chr7	99472841	99487594	99472841	99487594	+	ENST00000331410.9@ZNF789	ENST00000331410.9	protein_coding	99472841,99476403,99479661,99484030,99486476	99473056,99476480,99479787,99484143,99487594	Gene ID= ENSG00000198556.13 TPM= 2.12 Transcript Type= protein_coding
chr7	99493240	99500297	99493240	99500297	-	ENST00000337673.6@ZNF394	ENST00000337673.6	protein_coding	99499638,99498716,99493240	99500297,99498842,99494631	Gene ID= ENSG00000160908.14 TPM= 23.37 Transcript Type= protein_coding
chr7	99493242	99500264	99493242	99500264	-	ENST00000426306.2@ZNF394	ENST00000426306.2	protein_coding	99499638,99493242	99500264,99494631	Gene ID= ENSG00000160908.14 TPM= 3.19 Transcript Type= protein_coding
chr7	99504651	99533784	99504651	99533784	+	ENST00000326775.9@ZKSCAN5	ENST00000326775.9	protein_coding	99504651,99506005,99512453,99519827,99520169,99525813,99531108	99504733,99506458,99512591,99519909,99520304,99526418,99533784	Gene ID= ENSG00000196652.11 TPM= 1.06 Transcript Type= protein_coding
chr7	99505256	99533456	99505256	99533456	+	transcript3425.chr7.nic@ZKSCAN5	transcript3425.chr7.nic	protein_coding	99505256,99512453,99519827,99520169,99525813,99531108	99506458,99512591,99519909,99520304,99526418,99533456	Gene ID= ENSG00000196652.11 TPM= 2.12 Transcript Type= NA
chr7	99546308	99552134	99546308	99552134	-	ENST00000449309.1@FAM200A	ENST00000449309.1	protein_coding	99551854,99546308	99552134,99548506	Gene ID= ENSG00000221909.2 TPM= 3.19 Transcript Type= protein_coding
chr7	99557749	99559098	99557749	99559098	-	transcript3440.chr7.nnic@NA	transcript3440.chr7.nnic	NA	99557749	99559098	Gene ID= novel_gene_chr7_3441 TPM= 6.37 Transcript Type= NA
chr7	99558571	99564686	99558571	99564686	+	ENST00000416144.5@ZNF655	ENST00000416144.5	protein_coding	99558571,99560533,99561888,99562368,99563188,99563863	99558787,99560695,99561973,99562494,99563266,99564686	Gene ID= ENSG00000197343.10 TPM= 1.06 Transcript Type= nonsense_mediated_decay
chr7	99558406	99564705	99558406	99564705	+	ENST00000320583.9@ZNF655	ENST00000320583.9	protein_coding	99558406,99560533,99561888,99562368,99563863	99558787,99560695,99561973,99562494,99564705	Gene ID= ENSG00000197343.10 TPM= 4.6 Transcript Type= protein_coding
chr7	99558779	99564705	99558779	99564705	+	transcript3435.chr7.nic@ZNF655	transcript3435.chr7.nic	protein_coding	99558779,99560533,99561888,99562368,99563863	99559017,99560695,99561973,99562494,99564705	Gene ID= ENSG00000197343.10 TPM= 2.47 Transcript Type= NA
chr7	99558825	99576449	99558825	99576449	+	ENST00000424881.5@ZNF655	ENST00000424881.5	protein_coding	99558825,99560533,99571688,99572245	99559017,99560695,99571792,99576449	Gene ID= ENSG00000197343.10 TPM= 5.31 Transcript Type= protein_coding
chr7	99558422	99564703	99558422	99564703	+	ENST00000357864.6@ZNF655	ENST00000357864.6	protein_coding	99558422,99560533,99563863	99558787,99560695,99564703	Gene ID= ENSG00000197343.10 TPM= 2.47 Transcript Type= protein_coding
chr7	99616948	99632407	99616948	99632407	+	ENST00000394152.6@ZSCAN25	ENST00000394152.6	protein_coding	99616948,99618525,99619048,99619561,99621373,99622549,99624057,99629191	99617016,99618651,99619132,99619993,99621574,99622640,99624180,99632407	Gene ID= ENSG00000197037.10 TPM= 2.12 Transcript Type= protein_coding
chr7	99616964	99670942	99616964	99670942	+	transcript3446.chr7.nnic@ZSCAN25	transcript3446.chr7.nnic	protein_coding	99616964,99618525,99619048,99619561,99621373,99622549,99624057,99669095	99617016,99618651,99619132,99619993,99621574,99622640,99624180,99670942	Gene ID= ENSG00000197037.10 TPM= 4.25 Transcript Type= NA
chr7	99890903	99919610	99890903	99919610	-	transcript3448.chr7.nnic@TRIM4	transcript3448.chr7.nnic	protein_coding	99919009,99917772,99909565,99908582,99903576,99903218,99890903	99919610,99917885,99909660,99908812,99903598,99903315,99892746	Gene ID= ENSG00000146833.15 TPM= 4.25 Transcript Type= NA
chr7	99901166	99919493	99901166	99919493	-	ENST00000354241.5@TRIM4	ENST00000354241.5	protein_coding	99919009,99909565,99908582,99903576,99903218,99901166	99919493,99909660,99908812,99903598,99903315,99902174	Gene ID= ENSG00000146833.15 TPM= 2.12 Transcript Type= protein_coding
chr7	99966730	99976157	99966730	99976157	-	ENST00000292401.8@AZGP1	ENST00000292401.8	protein_coding	99975945,99971746,99968155,99966730	99976157,99972006,99968430,99967286	Gene ID= ENSG00000160862.12 TPM= 175.26 Transcript Type= protein_coding
chr7	99966738	99976017	99966738	99976017	-	ENST00000411734.1@AZGP1	ENST00000411734.1	protein_coding	99975945,99971746,99966738	99976017,99972006,99968430	Gene ID= ENSG00000160862.12 TPM= 4.25 Transcript Type= protein_coding
chr7	100015581	100041689	100015581	100041689	+	ENST00000324306.10@ZKSCAN1	ENST00000324306.10	protein_coding	100015581,100023419,100024154,100029861,100030249,100033305	100015726,100023932,100024307,100029952,100030375,100041689	Gene ID= ENSG00000106261.16 TPM= 24.43 Transcript Type= protein_coding
chr7	100049774	100065037	100049774	100065037	+	transcript3469.chr7.nic@ZSCAN21	transcript3469.chr7.nic	protein_coding	100049774,100051478,100056911,100057698,100063788	100049841,100051610,100057405,100057890,100065037	Gene ID= ENSG00000166529.14 TPM= 4.25 Transcript Type= NA
chr7	100049774	100065040	100049774	100065040	+	transcript3470.chr7.nic@ZSCAN21	transcript3470.chr7.nic	protein_coding	100049774,100051478,100056911,100057698,100064083	100049841,100051610,100057405,100057890,100065040	Gene ID= ENSG00000166529.14 TPM= 2.12 Transcript Type= NA
chr7	100049774	100065038	100049774	100065038	+	ENST00000456748.6@ZSCAN21	ENST00000456748.6	protein_coding	100049774,100056911,100057698,100063788,100064083	100049841,100057405,100057890,100063979,100065038	Gene ID= ENSG00000166529.14 TPM= 1.06 Transcript Type= protein_coding
chr7	100049774	100065036	100049774	100065036	+	ENST00000292450.8@ZSCAN21	ENST00000292450.8	protein_coding	100049774,100056911,100057698,100063788	100049841,100057405,100057890,100065036	Gene ID= ENSG00000166529.14 TPM= 6.37 Transcript Type= protein_coding
chr7	100069988	100081740	100069988	100081740	-	ENST00000299667.8@ZNF3	ENST00000299667.8	protein_coding	100081635,100079536,100077303,100075542,100075135,100069988	100081740,100079656,100077433,100075630,100075261,100072212	Gene ID= ENSG00000166526.16 TPM= 15.93 Transcript Type= protein_coding
chr7	100064033	100081743	100064033	100081743	-	transcript3472.chr7.nic@ZNF3	transcript3472.chr7.nic	protein_coding	100081635,100077303,100075542,100075135,100064033	100081743,100077433,100075630,100075261,100064912	Gene ID= ENSG00000166526.16 TPM= 2.12 Transcript Type= NA
chr7	100069972	100081764	100069972	100081764	-	ENST00000424697.5@ZNF3	ENST00000424697.5	protein_coding	100081635,100077303,100075542,100075135,100069972	100081764,100077433,100075630,100075261,100072212	Gene ID= ENSG00000166526.16 TPM= 4.25 Transcript Type= protein_coding
chr7	100070177	100081741	100070177	100081741	-	transcript3478.chr7.nic@ZNF3	transcript3478.chr7.nic	protein_coding	100081635,100079536,100077303,100075135,100070177	100081741,100079656,100077433,100075630,100072212	Gene ID= ENSG00000166526.16 TPM= 2.12 Transcript Type= NA
chr7	100076294	100077866	100076294	100077866	-	transcript3484.chr7.nnic@NA	transcript3484.chr7.nnic	NA	100076294	100077866	Gene ID= novel_gene_chr7_3485 TPM= 2.12 Transcript Type= NA
chr7	100088981	100091905	100088981	100091905	+	ENST00000418625.5@COPS6	ENST00000418625.5	protein_coding	100088981,100089293,100089615,100090399,100090592,100090902,100091038,100091238,100091420,100091649	100089066,100089415,100089746,100090487,100090654,100090949,100091152,100091330,100091520,100091905	Gene ID= ENSG00000168090.9 TPM= 249.61 Transcript Type= protein_coding
chr7	100092781	100100725	100092781	100100725	-	transcript3492.chr7.nic@MCM7	transcript3492.chr7.nic	protein_coding	100100213,100100014,100099589,100099279,100099023,100098578,100098141,100097834,100097614,100097301,100095774,100095387,100094173,100093292,100092781	100100725,100100093,100099753,100099403,100099203,100098715,100098290,100097948,100097745,100097384,100096167,100095470,100094341,100093401,100093133	Gene ID= ENSG00000166508.17 TPM= 5.84 Transcript Type= NA
chr7	100092781	100101940	100092781	100101940	-	ENST00000303887.9@MCM7	ENST00000303887.9	protein_coding	100101264,100100014,100099589,100099279,100099023,100098578,100098141,100097834,100097614,100097301,100095774,100095387,100094173,100093292,100092781	100101940,100100093,100099753,100099403,100099203,100098715,100098290,100097948,100097745,100097384,100096167,100095470,100094341,100093401,100093133	Gene ID= ENSG00000166508.17 TPM= 17.53 Transcript Type= protein_coding
chr7	100101557	100107179	100101557	100107179	+	ENST00000359593.8@AP4M1	ENST00000359593.8	protein_coding	100101557,100101880,100102675,100102864,100103409,100103612,100104092,100104874,100105045,100105240,100105445,100105959,100106241,100106403,100106658	100101772,100101968,100102781,100102960,100103519,100103692,100104154,100104940,100105098,100105346,100105539,100106003,100106291,100106514,100107179	Gene ID= ENSG00000221838.9 TPM= 9.56 Transcript Type= protein_coding
chr7	100101632	100107140	100101632	100107140	+	transcript3502.chr7.nic@AP4M1	transcript3502.chr7.nic	protein_coding	100101632,100101880,100102675,100102864,100103409,100103612,100104092,100104874,100105045,100105240,100105445,100105959,100106403,100106658	100101772,100102393,100102781,100102960,100103519,100103692,100104154,100104940,100105098,100105346,100105539,100106291,100106514,100107140	Gene ID= ENSG00000221838.9 TPM= 2.12 Transcript Type= NA
chr7	100101632	100107140	100101632	100107140	+	transcript3506.chr7.nic@AP4M1	transcript3506.chr7.nic	protein_coding	100101632,100101880,100103409,100103612,100104092,100104874,100105045,100105240,100105445,100105959,100106241,100106403,100106658	100101772,100101968,100103519,100103692,100104154,100104940,100105098,100105346,100105539,100106003,100106291,100106514,100107140	Gene ID= ENSG00000221838.9 TPM= 3.19 Transcript Type= NA
chr7	100101636	100103445	100101636	100103445	+	ENST00000478501.5@AP4M1	ENST00000478501.5	protein_coding	100101636,100101880,100102675,100102864,100103409	100101772,100102393,100102781,100102960,100103445	Gene ID= ENSG00000221838.9 TPM= 1.06 Transcript Type= processed_transcript
chr7	100107078	100119362	100107078	100119362	-	transcript3487.chr7.nic@TAF6	transcript3487.chr7.nic	protein_coding	100119204,100118518,100114054,100113868,100113616,100113349,100112798,100112108,100111922,100111728,100111139,100110200,100109948,100108367,100107926,100107078	100119362,100118649,100114268,100113954,100113769,100113405,100112917,100112253,100111999,100111829,100111321,100110274,100110073,100108540,100108123,100107623	Gene ID= ENSG00000106290.14 TPM= 9.74 Transcript Type= NA
chr7	100107070	100119398	100107070	100119398	-	ENST00000453269.6@TAF6	ENST00000453269.6	protein_coding	100119204,100114054,100113868,100113616,100113349,100112798,100112108,100111922,100111728,100111139,100110200,100109948,100108367,100107926,100107070	100119398,100114268,100113954,100113769,100113405,100112917,100112253,100111999,100111829,100111321,100110274,100110073,100108540,100108123,100107623	Gene ID= ENSG00000106290.14 TPM= 34.17 Transcript Type= protein_coding
chr7	100107078	100119360	100107078	100119360	-	transcript3497.chr7.nic@TAF6	transcript3497.chr7.nic	protein_coding	100119204,100114084,100113868,100113616,100113349,100112798,100112108,100111922,100111728,100111139,100110200,100109948,100108367,100107926,100107078	100119360,100114268,100113954,100113769,100113405,100112917,100112253,100111999,100111829,100111321,100110274,100110073,100108540,100108123,100107623	Gene ID= ENSG00000106290.14 TPM= 10.44 Transcript Type= NA
chr7	100107079	100119346	100107079	100119346	-	ENST00000344095.8@TAF6	ENST00000344095.8	protein_coding	100118880,100114054,100113868,100113616,100113349,100112798,100112108,100111922,100111728,100111139,100110200,100109948,100108367,100107926,100107079	100119346,100114268,100113954,100113769,100113405,100112917,100112253,100111999,100111829,100111321,100110274,100110073,100108540,100108123,100107623	Gene ID= ENSG00000106290.14 TPM= 10.44 Transcript Type= protein_coding
chr7	100119613	100125511	100119613	100125511	+	ENST00000262932.4@CNPY4	ENST00000262932.4	protein_coding	100119613,100122259,100122481,100122784,100124514,100124725	100119862,100122385,100122577,100122906,100124631,100125511	Gene ID= ENSG00000166997.7 TPM= 5.31 Transcript Type= protein_coding
chr7	100126694	100128498	100126694	100128498	+	ENST00000398075.3@MBLAC1	ENST00000398075.3	protein_coding	100126694,100127368	100127064,100128498	Gene ID= ENSG00000214309.4 TPM= 2.12 Transcript Type= protein_coding
chr7	100148972	100154203	100148972	100154203	+	transcript3523.chr7.nnic@LAMTOR4	transcript3523.chr7.nnic	protein_coding	100148972,100149499,100152653,100153400,100153867	100149053,100149579,100152757,100153517,100154203	Gene ID= ENSG00000188186.10 TPM= 4.09 Transcript Type= NA
chr7	100148912	100154203	100148912	100154203	+	ENST00000474141.5@LAMTOR4	ENST00000474141.5	protein_coding	100148912,100153400,100153867	100148975,100153517,100154203	Gene ID= ENSG00000188186.10 TPM= 4.09 Transcript Type= protein_coding
chr7	100148907	100154203	100148907	100154203	+	ENST00000341942.9@LAMTOR4	ENST00000341942.9	protein_coding	100148907,100149499,100153400,100153867	100148975,100149579,100153517,100154203	Gene ID= ENSG00000188186.10 TPM= 79.5 Transcript Type= protein_coding
chr7	100148913	100154203	100148913	100154203	+	ENST00000460732.5@LAMTOR4	ENST00000460732.5	protein_coding	100148913,100149499,100153400,100153850	100148975,100149579,100153517,100154203	Gene ID= ENSG00000188186.10 TPM= 3.82 Transcript Type= protein_coding
chr7	100148978	100154212	100148978	100154212	+	ENST00000468582.5@LAMTOR4	ENST00000468582.5	protein_coding	100148978,100149499,100153400,100153867	100149053,100149579,100153517,100154212	Gene ID= ENSG00000188186.10 TPM= 7.28 Transcript Type= protein_coding
chr7	100154420	100158685	100154420	100158685	-	ENST00000316937.7@C7orf43	ENST00000316937.7	protein_coding	100158089,100157843,100157633,100157373,100157094,100156845,100156634,100156386,100155671,100155262,100154420	100158685,100157938,100157762,100157459,100157214,100156992,100156716,100156549,100155825,100155455,100155164	Gene ID= ENSG00000146826.16 TPM= 7.44 Transcript Type= protein_coding
chr7	100219236	100221490	100219236	100221490	+	ENST00000317271.2@PVRIG	ENST00000317271.2	protein_coding	100219236,100219713,100220114,100220547,100220760,100220928	100219400,100220028,100220464,100220673,100220820,100221490	Gene ID= ENSG00000213413.2 TPM= 1.06 Transcript Type= protein_coding
chr7	100318891	100335923	100318891	100335923	-	transcript3555.chr7.nnic@PMS2P1	transcript3555.chr7.nnic	unprocessed_pseudogene	100335838,100332442,100330463,100330182,100328836,100325691,100318891	100335923,100332581,100330549,100330284,100329019,100325779,100321084	Gene ID= ENSG00000078319.9 TPM= 4.25 Transcript Type= NA
chr7	100325664	100336362	100325664	100336362	-	transcript3562.chr7.nnic@PMS2P1	transcript3562.chr7.nnic	unprocessed_pseudogene	100335838,100332442,100330463,100330182,100328836,100325664	100336362,100332581,100330549,100330284,100329019,100325779	Gene ID= ENSG00000078319.9 TPM= 2.12 Transcript Type= NA
chr7	100373445	100400099	100373445	100400099	+	ENST00000198536.6@PILRA	ENST00000198536.6	protein_coding	100373445,100374044,100389888,100397879,100399291,100399581,100399785	100373720,100374433,100390106,100397912,100399340,100399612,100400099	Gene ID= ENSG00000085514.15 TPM= 2.12 Transcript Type= protein_coding
chr7	100373528	100400096	100373528	100400096	+	ENST00000350573.2@PILRA	ENST00000350573.2	protein_coding	100373528,100374044,100397879,100399291,100399581,100399785	100373720,100374433,100397912,100399340,100399612,100400096	Gene ID= ENSG00000085514.15 TPM= 1.06 Transcript Type= protein_coding
chr7	100400826	100402043	100400826	100402043	-	ENST00000479315.1@ZCWPW1	ENST00000479315.1	protein_coding	100401889,100400826	100402043,100401336	Gene ID= ENSG00000078487.17 TPM= 1.06 Transcript Type= retained_intron
chr7	100400873	100428664	100400873	100428664	-	ENST00000360951.8@ZCWPW1	ENST00000360951.8	protein_coding	100428568,100425030,100420622,100419630,100419111,100417066,100416305,100415975,100409428,100408539,100407228,100406694,100405013,100404178,100403694,100400873	100428664,100425136,100420678,100419883,100419189,100417183,100416456,100416097,100409544,100408659,100407303,100406798,100405093,100404244,100403785,100401336	Gene ID= ENSG00000078487.17 TPM= 2.12 Transcript Type= protein_coding
chr7	100429631	100434126	100429631	100434126	+	ENST00000310512.3@MEPCE	ENST00000310512.3	protein_coding	100429631,100432919,100433263,100433502	100431689,100433137,100433389,100434126	Gene ID= ENSG00000146834.13 TPM= 28.68 Transcript Type= protein_coding
chr7	100435282	100436565	100435282	100436565	-	ENST00000292330.2@PPP1R35	ENST00000292330.2	protein_coding	100436141,100435848,100435631,100435282	100436565,100436064,100435767,100435533	Gene ID= ENSG00000160813.6 TPM= 12.21 Transcript Type= protein_coding
chr7	100435283	100436510	100435283	100436510	-	transcript3580.chr7.nic@PPP1R35	transcript3580.chr7.nic	protein_coding	100436141,100435848,100435283	100436510,100436064,100435533	Gene ID= ENSG00000160813.6 TPM= 3.19 Transcript Type= NA
chr7	100435287	100436510	100435287	100436510	-	transcript3582.chr7.nic@PPP1R35	transcript3582.chr7.nic	protein_coding	100436141,100435287	100436510,100436064	Gene ID= ENSG00000160813.6 TPM= 4.25 Transcript Type= NA
chr7	100435282	100436423	100435282	100436423	-	ENST00000487452.1@PPP1R35	ENST00000487452.1	protein_coding	100435848,100435631,100435282	100436423,100435767,100435533	Gene ID= ENSG00000160813.6 TPM= 5.84 Transcript Type= retained_intron
chr7	100466519	100479279	100466519	100479279	-	ENST00000300181.6@TSC22D4	ENST00000300181.6	protein_coding	100478794,100477277,100474274,100467552,100466519	100479279,100478307,100474440,100467600,100467168	Gene ID= ENSG00000166925.8 TPM= 33.99 Transcript Type= protein_coding
chr7	100473788	100479169	100473788	100479169	-	ENST00000493217.1@TSC22D4	ENST00000493217.1	protein_coding	100478794,100477277,100473788	100479169,100478307,100474440	Gene ID= ENSG00000166925.8 TPM= 4.25 Transcript Type= retained_intron
chr7	100539267	100565961	100539267	100565961	+	transcript3590.chr7.nic@AGFG2	transcript3590.chr7.nic	protein_coding	100539267,100548822,100550396,100553347,100554093,100555610,100556594,100562259,100562594,100562863,100563834,100564218,100564932	100539567,100548915,100550511,100553500,100554258,100555735,100556626,100562379,100562682,100562946,100563962,100564303,100565961	Gene ID= ENSG00000106351.12 TPM= 2.66 Transcript Type= NA
chr7	100539181	100565961	100539181	100565961	+	transcript3596.chr7.nnic@AGFG2	transcript3596.chr7.nnic	protein_coding	100539181,100548822,100550396,100553347,100554093,100555610,100562259,100562594,100563834,100564218,100564932	100539567,100548915,100550511,100553500,100554258,100555735,100562379,100562682,100563962,100564303,100565961	Gene ID= ENSG00000106351.12 TPM= 3.19 Transcript Type= NA
chr7	100539225	100568219	100539225	100568219	+	ENST00000300176.8@AGFG2	ENST00000300176.8	protein_coding	100539225,100548822,100550396,100553347,100554093,100555610,100562259,100562594,100562863,100563834,100564218,100564932	100539567,100548915,100550511,100553500,100554258,100555735,100562379,100562682,100562946,100563962,100564303,100568219	Gene ID= ENSG00000106351.12 TPM= 14.34 Transcript Type= protein_coding
chr7	100574660	100586153	100574660	100586153	-	ENST00000310300.10@LRCH4	ENST00000310300.10	protein_coding	100585881,100582315,100582041,100581777,100578650,100578399,100578159,100577822,100577664,100577497,100577273,100577086,100576902,100576694,100576238,100575871,100575705,100574660	100586153,100582459,100582167,100581882,100578786,100578511,100578258,100577912,100577740,100577558,100577389,100577154,100577005,100576777,100576323,100576008,100575782,100575304	Gene ID= ENSG00000077454.15 TPM= 11.68 Transcript Type= protein_coding
chr7	100602320	100608175	100602320	100608175	+	transcript3604.chr7.nic@PCOLCE	transcript3604.chr7.nic	protein_coding	100602320,100603430,100603959,100604428,100605091,100605676,100606416,100607452,100607637,100607937	100602551,100603538,100604217,100604502,100605215,100605812,100606630,100607523,100607807,100608175	Gene ID= ENSG00000106333.12 TPM= 12.21 Transcript Type= NA
chr7	100602177	100608175	100602177	100608175	+	ENST00000223061.5@PCOLCE	ENST00000223061.5	protein_coding	100602177,100603430,100603959,100605091,100605676,100606416,100607452,100607637,100607937	100602551,100603538,100604217,100605215,100605812,100606630,100607523,100607807,100608175	Gene ID= ENSG00000106333.12 TPM= 46.2 Transcript Type= protein_coding
chr7	100612510	100615384	100612510	100615384	+	ENST00000393950.6@MOSPD3	ENST00000393950.6	protein_coding	100612510,100613194,100613477,100614867,100615152	100612996,100613269,100613706,100615031,100615384	Gene ID= ENSG00000106330.11 TPM= 12.75 Transcript Type= protein_coding
chr7	100673531	100679174	100673531	100679174	+	ENST00000303210.8@GNB2	ENST00000303210.8	protein_coding	100673531,100676177,100676535,100676693,100677352,100677498,100677752,100678098,100678398,100678695	100673923,100676322,100676573,100676799,100677415,100677660,100677818,100678299,100678614,100679174	Gene ID= ENSG00000172354.9 TPM= 144.45 Transcript Type= protein_coding
chr7	100691508	100694232	100691508	100694232	-	transcript3622.chr7.nnic@NA	transcript3622.chr7.nnic	NA	100691508	100694232	Gene ID= novel_gene_chr7_3623 TPM= 2.12 Transcript Type= NA
chr7	100706053	100707495	100706053	100707495	+	ENST00000303151.4@POP7	ENST00000303151.4	protein_coding	100706053,100706821	100706304,100707495	Gene ID= ENSG00000172336.4 TPM= 33.99 Transcript Type= protein_coding
chr7	100817860	100824750	100817860	100824750	-	transcript3630.chr7.nic@EPHB4	transcript3630.chr7.nic	protein_coding	100822271,100820141,100817860	100824750,100820296,100819889	Gene ID= ENSG00000196411.9 TPM= 3.19 Transcript Type= NA
chr7	100802565	100827499	100802565	100827499	-	ENST00000358173.7@EPHB4	ENST00000358173.7	protein_coding	100826979,100824203,100823644,100822271,100820141,100819557,100818520,100817192,100813919,100813652,100813095,100812747,100807365,100806420,100805501,100805166,100802565	100827499,100824273,100823931,100822667,100820296,100819889,100818644,100817357,100814021,100813716,100813208,100812994,100807580,100806569,100805694,100805321,100803590	Gene ID= ENSG00000196411.9 TPM= 40.36 Transcript Type= protein_coding
chr7	100852719	100865538	100852719	100865538	+	ENST00000540482.5@SLC12A9	ENST00000540482.5	protein_coding	100852719,100854156,100854620,100855706,100856868,100858835,100859050,100859885,100860150,100861138,100861392,100861737,100862681,100865287	100852835,100854378,100854754,100855837,100857176,100858942,100859161,100860042,100860232,100861262,100861584,100861911,100862827,100865538	Gene ID= ENSG00000146828.17 TPM= 1.06 Transcript Type= protein_coding
chr7	100867138	100873454	100867138	100873454	+	ENST00000200457.8@TRIP6	ENST00000200457.8	protein_coding	100867138,100867861,100868108,100868495,100870370,100870574,100871543,100872624,100873172	100867606,100867988,100868233,100868866,100870463,100870743,100871721,100872744,100873454	Gene ID= ENSG00000087077.13 TPM= 40.36 Transcript Type= protein_coding
chr7	100875126	100888664	100875126	100888664	+	ENST00000614484.4@SRRT	ENST00000614484.4	protein_coding	100875126,100875573,100881285,100881659,100882053,100884070,100884368,100884740,100884923,100885216,100885701,100885863,100886247,100886795,100887047,100887320,100887703,100888042,100888257,100888474	100875328,100875712,100881413,100881805,100882241,100884239,100884552,100884838,100885040,100885370,100885762,100885941,100886435,100886968,100887200,100887513,100887859,100888143,100888383,100888664	Gene ID= ENSG00000087087.19 TPM= 49.92 Transcript Type= protein_coding
chr7	100875126	100888664	100875126	100888664	+	ENST00000618262.4@SRRT	ENST00000618262.4	protein_coding	100875126,100875573,100881285,100881659,100882053,100884070,100884368,100884740,100884923,100885213,100885701,100885863,100886247,100886795,100887047,100887320,100887703,100888054,100888257,100888474	100875328,100875712,100881413,100881805,100882241,100884239,100884552,100884838,100885040,100885370,100885762,100885941,100886435,100886968,100887200,100887513,100887859,100888143,100888383,100888664	Gene ID= ENSG00000087087.19 TPM= 22.31 Transcript Type= protein_coding
chr7	100888723	100889718	100888723	100889718	-	ENST00000388761.3@UFSP1	ENST00000388761.3	protein_coding	100888723	100889718	Gene ID= ENSG00000176125.4 TPM= 3.19 Transcript Type= protein_coding
chr7	100889994	100896132	100889994	100896132	-	ENST00000428317.5@ACHE	ENST00000428317.5	protein_coding	100896059,100893165,100892334,100891169,100889994	100896132,100894252,100892818,100891338,100890335	Gene ID= ENSG00000087085.13 TPM= 2.12 Transcript Type= protein_coding
chr7	101091608	101093516	101091608	101093516	+	transcript3663.chr7.nnic@NA	transcript3663.chr7.nnic	NA	101091608	101093516	Gene ID= novel_gene_chr7_3664 TPM= 9.56 Transcript Type= NA
chr7	101094824	101097898	101094824	101097898	+	transcript3667.chr7.nnic@NA	transcript3667.chr7.nnic	NA	101094824	101097898	Gene ID= novel_gene_chr7_3668 TPM= 2.12 Transcript Type= NA
chr7	101127089	101139266	101127089	101139266	+	ENST00000223095.4@SERPINE1	ENST00000223095.4	protein_coding	101127089,101128393,101130421,101131875,101133695,101135494,101135715,101137001,101137405	101127244,101128664,101130654,101132069,101133893,101135594,101135801,101137084,101139266	Gene ID= ENSG00000106366.8 TPM= 39.3 Transcript Type= protein_coding
chr7	101133581	101135258	101133581	101135258	+	transcript3673.chr7.nnic@NA	transcript3673.chr7.nnic	NA	101133581	101135258	Gene ID= novel_gene_chr7_3674 TPM= 2.12 Transcript Type= NA
chr7	101154397	101161277	101154397	101161277	+	ENST00000337619.9@AP1S1	ENST00000337619.9	protein_coding	101154397,101156594,101157377,101159059,101160519	101154517,101156772,101157485,101159196,101161277	Gene ID= ENSG00000106367.13 TPM= 2.12 Transcript Type= protein_coding
chr7	101205977	101217673	101205977	101217673	-	ENST00000223127.7@PLOD3	ENST00000223127.7	protein_coding	101217166,101216695,101216410,101216163,101215908,101215089,101213107,101212842,101212530,101212253,101211846,101211591,101210532,101210331,101210093,101208853,101207578,101206779,101205977	101217673,101216786,101216546,101216326,101216020,101215152,101213204,101212943,101212655,101212374,101211950,101211716,101210673,101210444,101210161,101208957,101207724,101206904,101206436	Gene ID= ENSG00000106397.11 TPM= 72.23 Transcript Type= protein_coding
chr7	101217668	101224190	101217668	101224190	+	ENST00000305105.2@ZNHIT1	ENST00000305105.2	protein_coding	101217668,101222604,101223477,101223673,101223937	101218217,101222774,101223556,101223842,101224190	Gene ID= ENSG00000106400.11 TPM= 88.16 Transcript Type= protein_coding
chr7	101233765	101239773	101233765	101239773	-	transcript3684.chr7.nic@CLDN15	transcript3684.chr7.nic	protein_coding	101237365,101233765	101239773,101234442	Gene ID= ENSG00000106404.13 TPM= 3.19 Transcript Type= NA
chr7	101239612	101252291	101239612	101252291	-	ENST00000473527.5@FIS1	ENST00000473527.5	protein_coding	101251895,101244007,101240830,101240142,101239612	101252291,101244139,101240906,101240247,101239903	Gene ID= ENSG00000214253.8 TPM= 3.54 Transcript Type= nonsense_mediated_decay
chr7	101239612	101245085	101239612	101245085	-	ENST00000223136.4@FIS1	ENST00000223136.4	protein_coding	101244960,101244007,101240830,101240142,101239612	101245085,101244139,101240906,101240247,101239903	Gene ID= ENSG00000214253.8 TPM= 208 Transcript Type= protein_coding
chr7	101239607	101245048	101239607	101245048	-	ENST00000442303.1@FIS1	ENST00000442303.1	protein_coding	101244898,101240830,101240142,101239607	101245048,101240906,101240247,101239903	Gene ID= ENSG00000214253.8 TPM= 11.5 Transcript Type= protein_coding
chr7	101316331	101321818	101316331	101321818	-	transcript3696.chr7.nic@IFT22	transcript3696.chr7.nic	protein_coding	101321671,101318956,101318124,101316331	101321818,101319032,101318213,101316542	Gene ID= ENSG00000128581.15 TPM= 3.19 Transcript Type= NA
chr7	101313367	101321823	101313367	101321823	-	ENST00000621899.4@IFT22	ENST00000621899.4	protein_coding	101321671,101316340,101313367	101321823,101316542,101315282	Gene ID= ENSG00000128581.15 TPM= 4.25 Transcript Type= protein_coding
chr7	101314753	101321764	101314753	101321764	-	ENST00000498704.6@IFT22	ENST00000498704.6	protein_coding	101321671,101318124,101316340,101314753	101321764,101318213,101316542,101315282	Gene ID= ENSG00000128581.15 TPM= 8.5 Transcript Type= protein_coding
chr7	101314795	101321777	101314795	101321777	-	ENST00000437644.2@IFT22	ENST00000437644.2	protein_coding	101321671,101318956,101316340,101314795	101321777,101319032,101316542,101315282	Gene ID= ENSG00000128581.15 TPM= 5.31 Transcript Type= protein_coding
chr7	101816737	102283957	101816737	102283957	+	transcript3703.chr7.nic@CUX1	transcript3703.chr7.nic	protein_coding	101816737,101916115,102028098,102070339,102097364,102104336,102111698,102115207,102158560,102170446,102178469,102189813,102193842,102195507,102273366,102274244,102275247,102277949,102280037,102280804,102281840,102282712,102283021	101817669,101916225,102028145,102070417,102097501,102104459,102111774,102115273,102158608,102170550,102178657,102189871,102193890,102195603,102273493,102274310,102275359,102278065,102280120,102280860,102281920,102282776,102283957	Gene ID= ENSG00000257923.9 TPM= 50.98 Transcript Type= NA
chr7	101821343	101822012	101821343	101822012	-	transcript3720.chr7.nnic@NA	transcript3720.chr7.nnic	NA	101821343	101822012	Gene ID= novel_gene_chr7_3721 TPM= 4.25 Transcript Type= NA
chr7	101850405	101851950	101850405	101851950	-	transcript3724.chr7.nnic@NA	transcript3724.chr7.nnic	NA	101850405	101851950	Gene ID= novel_gene_chr7_3725 TPM= 6.37 Transcript Type= NA
chr7	101858663	101860081	101858663	101860081	-	transcript3722.chr7.nnic@NA	transcript3722.chr7.nnic	NA	101858663	101860081	Gene ID= novel_gene_chr7_3723 TPM= 5.31 Transcript Type= NA
chr7	102134235	102136844	102134235	102136844	-	transcript3726.chr7.nnic@NA	transcript3726.chr7.nnic	NA	102134235	102136844	Gene ID= novel_gene_chr7_3727 TPM= 2.12 Transcript Type= NA
chr7	102248529	102249702	102248529	102249702	+	transcript3714.chr7.nnic@NA	transcript3714.chr7.nnic	NA	102248529	102249702	Gene ID= novel_gene_chr7_3715 TPM= 4.25 Transcript Type= NA
chr7	102255038	102257861	102255038	102257861	+	transcript3718.chr7.nnic@NA	transcript3718.chr7.nnic	NA	102255038	102257861	Gene ID= novel_gene_chr7_3719 TPM= 28.68 Transcript Type= NA
chr7	102286825	102321711	102286825	102321711	+	transcript3728.chr7.nic@SH2B2	transcript3728.chr7.nic	protein_coding	102286825,102300522,102306721,102308815,102314336,102314512,102317187,102320331,102321299	102287094,102301279,102306822,102308906,102314427,102314682,102317395,102320502,102321711	Gene ID= ENSG00000160999.10 TPM= 7.44 Transcript Type= NA
chr7	102299199	102300710	102299199	102300710	-	transcript3730.chr7.nnic@NA	transcript3730.chr7.nnic	NA	102299199	102300710	Gene ID= novel_gene_chr7_3731 TPM= 5.31 Transcript Type= NA
chr7	102363873	102397403	102363873	102397403	+	transcript3745.chr7.nic@PRKRIP1	transcript3745.chr7.nic	protein_coding	102363873,102365974,102375823,102376212,102395977	102364411,102366076,102375949,102376322,102397403	Gene ID= ENSG00000128563.13 TPM= 3.19 Transcript Type= NA
chr7	102363897	102426676	102363897	102426676	+	ENST00000496391.5@PRKRIP1	ENST00000496391.5	protein_coding	102363897,102365955,102375823,102376212,102395977,102397620,102399548,102404598,102407434,102425014	102364411,102366076,102375949,102376322,102396537,102397698,102399648,102404683,102407498,102426676	Gene ID= ENSG00000128563.13 TPM= 10.62 Transcript Type= protein_coding
chr7	102363895	102425449	102363895	102425449	+	ENST00000482549.5@PRKRIP1	ENST00000482549.5	protein_coding	102363895,102365974,102375823,102376212,102397620,102399548,102404598,102407434,102425014	102364411,102366076,102375949,102376322,102397698,102399648,102404683,102407498,102425449	Gene ID= ENSG00000128563.13 TPM= 2.12 Transcript Type= processed_transcript
chr7	102363894	102425446	102363894	102425446	+	ENST00000469763.5@PRKRIP1	ENST00000469763.5	protein_coding	102363894,102365955,102375823,102376212,102397620,102399548,102404598,102407434,102425014	102364411,102366076,102375949,102376322,102397698,102399648,102404683,102407498,102425446	Gene ID= ENSG00000128563.13 TPM= 1.06 Transcript Type= processed_transcript
chr7	102396363	102426666	102396363	102426666	+	ENST00000397912.3@PRKRIP1	ENST00000397912.3	protein_coding	102396363,102397620,102399548,102404598,102407434,102425014	102396537,102397698,102399648,102404683,102407498,102426666	Gene ID= ENSG00000128563.13 TPM= 20.18 Transcript Type= protein_coding
chr7	102363873	102381203	102363873	102381203	+	transcript3743.chr7.nnic@AC091390.4	transcript3743.chr7.nnic	transcribed_unprocessed_pseudogene	102363873,102365974,102375823,102376212,102380485,102380934	102364411,102366076,102375949,102376322,102380617,102381203	Gene ID= ENSG00000239969.5 TPM= 3.19 Transcript Type= NA
chr7	102376642	102377849	102376642	102377849	-	transcript3750.chr7.nnic@NA	transcript3750.chr7.nnic	NA	102376642	102377849	Gene ID= novel_gene_chr7_3751 TPM= 5.31 Transcript Type= NA
chr7	102433530	102456821	102433530	102456821	+	ENST00000356387.6@ORAI2	ENST00000356387.6	protein_coding	102433530,102436202,102438944,102446513	102433661,102436333,102439181,102456821	Gene ID= ENSG00000160991.15 TPM= 3.19 Transcript Type= protein_coding
chr7	102433530	102456821	102433530	102456821	+	ENST00000611770.4@ORAI2	ENST00000611770.4	protein_coding	102433530,102438944,102446513	102433661,102439181,102456821	Gene ID= ENSG00000160991.15 TPM= 2.12 Transcript Type= protein_coding
chr7	102456238	102464876	102456238	102464876	-	ENST00000292566.3@ALKBH4	ENST00000292566.3	protein_coding	102464714,102459604,102456238	102464876,102459801,102457981	Gene ID= ENSG00000160993.3 TPM= 2.12 Transcript Type= protein_coding
chr7	102456834	102464863	102456834	102464863	-	ENST00000490528.1@ALKBH4	ENST00000490528.1	protein_coding	102464714,102459604,102456834	102464863,102459710,102457981	Gene ID= ENSG00000160993.3 TPM= 2.12 Transcript Type= nonsense_mediated_decay
chr7	102464929	102473168	102464929	102473168	+	ENST00000292616.9@LRWD1	ENST00000292616.9	protein_coding	102464929,102465817,102466154,102467339,102467719,102468062,102468263,102468554,102468855,102469574,102469742,102472218,102472454,102472692,102472909	102465160,102466051,102466270,102467479,102467823,102468187,102468377,102468654,102469062,102469646,102469882,102472309,102472609,102472804,102473168	Gene ID= ENSG00000161036.12 TPM= 22.31 Transcript Type= protein_coding
chr7	102473118	102476243	102473118	102476243	+	transcript3816.chr7.nnic@NA	transcript3816.chr7.nnic	NA	102473118	102476243	Gene ID= novel_gene_chr7_3817 TPM= 5.31 Transcript Type= NA
chr7	102473118	102478907	102473118	102478907	-	ENST00000292614.9@POLR2J	ENST00000292614.9	protein_coding	102478808,102476181,102474361,102473118	102478907,102476270,102474535,102473684	Gene ID= ENSG00000005075.15 TPM= 7.44 Transcript Type= protein_coding
chr7	102483144	102494868	102483144	102494868	-	ENST00000488284.6@RASA4B	ENST00000488284.6	protein_coding	102494538,102493825,102493116,102489062,102487786,102485039,102483825,102483144	102494868,102493969,102493285,102489273,102488598,102485159,102483889,102483713	Gene ID= ENSG00000170667.14 TPM= 11.68 Transcript Type= retained_intron
chr7	102531705	102532876	102531705	102532876	-	transcript3820.chr7.nnic@NA	transcript3820.chr7.nnic	NA	102531705	102532876	Gene ID= novel_gene_chr7_3821 TPM= 3.19 Transcript Type= NA
chr7	102537919	102572620	102537919	102572620	-	transcript3776.chr7.nic@POLR2J3	transcript3776.chr7.nic	protein_coding	102572443,102569835,102568010,102566997,102541501,102541093,102540015,102539606,102537919	102572620,102569924,102568184,102567083,102541662,102541303,102540091,102539726,102538525	Gene ID= ENSG00000168255.19 TPM= 5.84 Transcript Type= NA
chr7	102537920	102572649	102537920	102572649	-	ENST00000486319.5@POLR2J3	ENST00000486319.5	protein_coding	102572472,102569835,102566997,102541501,102541093,102540015,102539606,102537920	102572649,102569924,102567083,102541662,102541303,102540091,102539726,102538525	Gene ID= ENSG00000168255.19 TPM= 19.47 Transcript Type= nonsense_mediated_decay
chr7	102537919	102544171	102537919	102544171	-	transcript3785.chr7.nic@POLR2J3	transcript3785.chr7.nic	protein_coding	102543525,102541501,102541093,102540015,102539606,102537919	102544171,102541662,102541303,102540091,102539726,102538525	Gene ID= ENSG00000168255.19 TPM= 19.12 Transcript Type= NA
chr7	102537919	102544171	102537919	102544171	-	transcript3787.chr7.nic@POLR2J3	transcript3787.chr7.nic	protein_coding	102541501,102541093,102540015,102539606,102537919	102544171,102541303,102540091,102539726,102538525	Gene ID= ENSG00000168255.19 TPM= 56.29 Transcript Type= NA
chr7	102562656	102572583	102562656	102572583	-	ENST00000511313.5@POLR2J3	ENST00000511313.5	protein_coding	102572472,102569835,102562656	102572583,102569924,102567083	Gene ID= ENSG00000168255.19 TPM= 10.97 Transcript Type= protein_coding
chr7	102537919	102572539	102537919	102572539	-	ENST00000379340.9@POLR2J3	ENST00000379340.9	protein_coding	102572472,102569835,102568010,102566997,102541501,102541093,102540015,102539606,102537919	102572539,102569924,102568184,102567083,102541662,102541303,102540091,102539726,102538525	Gene ID= ENSG00000168255.19 TPM= 5.13 Transcript Type= nonsense_mediated_decay
chr7	102582323	102611591	102582323	102611591	-	ENST00000461209.5@RASA4	ENST00000461209.5	protein_coding	102611086,102609341,102608761,102605858,102602324,102600257,102599860,102596012,102595634,102595305,102594447,102594050,102593707,102592994,102592285,102590159,102587635,102584218,102583004,102582323	102611591,102609454,102608822,102605987,102602405,102600388,102599954,102596129,102595784,102595369,102594559,102594242,102593844,102593138,102592454,102590296,102587770,102584338,102583068,102582892	Gene ID= ENSG00000105808.17 TPM= 9.56 Transcript Type= protein_coding
chr7	102582325	102616756	102582325	102616756	-	ENST00000449970.6@RASA4	ENST00000449970.6	protein_coding	102616625,102611086,102609341,102608761,102605858,102602324,102600257,102599860,102596012,102595634,102595305,102594447,102594050,102593707,102592994,102592285,102587635,102584218,102583004,102582325	102616756,102611142,102609454,102608822,102605987,102602405,102600388,102599954,102596129,102595784,102595369,102594559,102594242,102593844,102593138,102592454,102587770,102584338,102583068,102582892	Gene ID= ENSG00000105808.17 TPM= 8.5 Transcript Type= protein_coding
chr7	102637025	102671632	102637025	102671632	-	transcript3778.chr7.nnic@POLR2J2	transcript3778.chr7.nnic	protein_coding	102671523,102668915,102667090,102666077,102640612,102640204,102639123,102638714,102637025	102671632,102669004,102667264,102666163,102640773,102640414,102639199,102638834,102637633	Gene ID= ENSG00000267645.5 TPM= 16.46 Transcript Type= NA
chr7	102637049	102671641	102637049	102671641	-	ENST00000476151.5@POLR2J2	ENST00000476151.5	protein_coding	102671552,102668915,102667090,102666077,102640612,102640204,102639123,102638714,102637049	102671641,102669004,102667264,102666163,102640773,102640414,102639199,102638834,102637633	Gene ID= ENSG00000267645.5 TPM= 12.21 Transcript Type= nonsense_mediated_decay
chr7	102748971	102809225	102748971	102809225	+	ENST00000442873.5@FAM185A	ENST00000442873.5	protein_coding	102748971,102751692,102757854,102761273,102772409,102777253,102787335,102808290	102749636,102751801,102757946,102761411,102772450,102777348,102787469,102809225	Gene ID= ENSG00000222011.8 TPM= 1.06 Transcript Type= nonsense_mediated_decay
chr7	102912991	102944949	102912991	102944949	+	ENST00000339431.8@LRRC17	ENST00000339431.8	protein_coding	102912991,102933774,102939430,102944210	102913145,102934685,102939585,102944949	Gene ID= ENSG00000128606.12 TPM= 1.06 Transcript Type= protein_coding
chr7	103074881	103099764	103074881	103099764	+	ENST00000323716.7@ARMC10	ENST00000323716.7	protein_coding	103074881,103075777,103083682,103086630,103092477,103097277,103098299	103075411,103075881,103083830,103086764,103092653,103097348,103099764	Gene ID= ENSG00000170632.13 TPM= 8.85 Transcript Type= protein_coding
chr7	103074881	103099758	103074881	103099758	+	ENST00000441711.6@ARMC10	ENST00000441711.6	protein_coding	103074881,103083682,103086630,103092477,103097277,103098299	103075411,103083830,103086764,103092653,103097348,103099758	Gene ID= ENSG00000170632.13 TPM= 36.46 Transcript Type= protein_coding
chr7	103074881	103099749	103074881	103099749	+	ENST00000425331.5@ARMC10	ENST00000425331.5	protein_coding	103074881,103083682,103086630,103092477,103098299	103075411,103083830,103086764,103092653,103099749	Gene ID= ENSG00000170632.13 TPM= 2.66 Transcript Type= protein_coding
chr7	103074881	103099758	103074881	103099758	+	ENST00000454559.5@ARMC10	ENST00000454559.5	protein_coding	103074881,103083682,103086630,103097277,103098299	103075411,103083830,103086764,103097348,103099758	Gene ID= ENSG00000170632.13 TPM= 6.19 Transcript Type= protein_coding
chr7	103102510	103149073	103102510	103149073	-	ENST00000465647.5@NAPEPLD	ENST00000465647.5	protein_coding	103148811,103128483,103119577,103115060,103102510	103149073,103128792,103120223,103115174,103103554	Gene ID= ENSG00000161048.11 TPM= 4.25 Transcript Type= protein_coding
chr7	103151921	103154331	103151921	103154331	+	transcript3852.chr7.nnic@NA	transcript3852.chr7.nnic	NA	103151921	103154331	Gene ID= novel_gene_chr7_3853 TPM= 2.12 Transcript Type= NA
chr7	103297422	103313235	103297422	103313235	+	ENST00000249269.8@PMPCB	ENST00000249269.8	protein_coding	103297422,103298568,103299443,103300178,103303842,103304411,103307596,103308952,103310315,103311643,103311808,103312056,103312207	103297558,103298708,103299529,103300307,103304040,103304490,103307708,103309095,103310475,103311728,103311896,103312131,103313235	Gene ID= ENSG00000105819.13 TPM= 42.49 Transcript Type= protein_coding
chr7	103297423	103329792	103297423	103329792	+	transcript3867.chr7.nic@PMPCB	transcript3867.chr7.nic	protein_coding	103297423,103298568,103299443,103300178,103303842,103304411,103307596,103308952,103310315,103311643,103311808,103312056,103328931	103297558,103298708,103299529,103300307,103304040,103304490,103307708,103309095,103310475,103311728,103311896,103312131,103329792	Gene ID= ENSG00000105819.13 TPM= 3.19 Transcript Type= NA
chr7	103297457	103312312	103297457	103312312	+	ENST00000453466.1@PMPCB	ENST00000453466.1	protein_coding	103297457,103298568,103299443,103300187,103303842,103304411,103307596,103308952,103310315,103311643,103311808,103312056,103312207	103297558,103298708,103299533,103300307,103304040,103304490,103307708,103309095,103310475,103311728,103311896,103312131,103312312	Gene ID= ENSG00000105819.13 TPM= 40.36 Transcript Type= nonsense_mediated_decay
chr7	103312519	103344863	103312519	103344863	-	transcript3855.chr7.nic@DNAJC2	transcript3855.chr7.nic	protein_coding	103344559,103341764,103337736,103327656,103327332,103326543,103324482,103323598,103322703,103322511,103321932,103319756,103319609,103316830,103315988,103315764,103312947,103312519	103344863,103341954,103337811,103327754,103327378,103326684,103324562,103323663,103322794,103322632,103322081,103319844,103319678,103317014,103316088,103315871,103313101,103312643	Gene ID= ENSG00000105821.14 TPM= 4.78 Transcript Type= NA
chr7	103312519	103344873	103312519	103344873	-	ENST00000379263.7@DNAJC2	ENST00000379263.7	protein_coding	103344559,103341764,103337736,103327656,103326543,103324482,103323598,103322703,103322511,103321932,103319756,103319609,103316830,103315988,103315764,103312947,103312519	103344873,103341954,103337811,103327754,103326684,103324562,103323663,103322794,103322632,103322081,103319844,103319678,103317014,103316088,103315871,103313101,103312643	Gene ID= ENSG00000105821.14 TPM= 9.03 Transcript Type= protein_coding
chr7	103344199	103368155	103344199	103368155	+	transcript3870.chr7.nic@PSMC2	transcript3870.chr7.nic	protein_coding	103344199,103347524,103353921,103354868,103355694,103361957,103362686,103363344,103364143,103366076,103367413,103367713,103367897	103344342,103347781,103353958,103354949,103355793,103362088,103362758,103363439,103364307,103366163,103367615,103367809,103368155	Gene ID= ENSG00000161057.11 TPM= 83.91 Transcript Type= NA
chr7	104126341	104208047	104126341	104208047	-	ENST00000297431.8@ORC5	ENST00000297431.8	protein_coding	104207833,104204142,104200758,104197725,104195143,104188251,104184123,104183943,104168473,104166772,104165235,104161072,104136781,104126341	104208047,104204234,104200958,104197799,104195254,104188381,104184171,104184033,104168525,104166884,104165282,104161182,104136893,104126893	Gene ID= ENSG00000164815.10 TPM= 10.62 Transcript Type= protein_coding
chr7	104981747	104985166	104981747	104985166	-	transcript3888.chr7.nnic@NA	transcript3888.chr7.nnic	NA	104981747	104985166	Gene ID= novel_gene_chr7_3889 TPM= 2.12 Transcript Type= NA
chr7	104992453	104993141	104992453	104993141	-	transcript3890.chr7.nnic@NA	transcript3890.chr7.nnic	NA	104992453	104993141	Gene ID= novel_gene_chr7_3891 TPM= 2.12 Transcript Type= NA
chr7	105001174	105002805	105001174	105002805	+	transcript3892.chr7.nnic@NA	transcript3892.chr7.nnic	NA	105001174	105002805	Gene ID= novel_gene_chr7_3893 TPM= 11.68 Transcript Type= NA
chr7	105011707	105013058	105011707	105013058	-	transcript3894.chr7.nnic@NA	transcript3894.chr7.nnic	NA	105011707	105013058	Gene ID= novel_gene_chr7_3895 TPM= 3.19 Transcript Type= NA
chr7	105013282	105014096	105013282	105014096	-	transcript3896.chr7.nnic@NA	transcript3896.chr7.nnic	NA	105013282	105014096	Gene ID= novel_gene_chr7_3897 TPM= 13.81 Transcript Type= NA
chr7	105014144	105090132	105014144	105090132	+	transcript3908.chr7.nic@KMT2E	transcript3908.chr7.nic	protein_coding	105014144,105038126,105040839,105062164,105063351,105066727,105073619,105074643,105076043,105076963,105077303,105078846,105081688,105090009	105014535,105038199,105041023,105062278,105063580,105066807,105073677,105074815,105076081,105077193,105077433,105078963,105081797,105090132	Gene ID= ENSG00000005483.20 TPM= 31.86 Transcript Type= NA
chr7	105014158	105091314	105014158	105091314	+	transcript3911.chr7.nic@KMT2E	transcript3911.chr7.nic	protein_coding	105014158,105040839,105062164,105063351,105066727,105073619,105074643,105076043,105076963,105077303,105078846,105081688,105090009,105091216	105014535,105041023,105062278,105063580,105066807,105073677,105074815,105076081,105077193,105077433,105078963,105081797,105090273,105091314	Gene ID= ENSG00000005483.20 TPM= 4.25 Transcript Type= NA
chr7	105014144	105041066	105014144	105041066	+	transcript3928.chr7.nic@KMT2E	transcript3928.chr7.nic	protein_coding	105014144,105038126,105040839	105014535,105038199,105041066	Gene ID= ENSG00000005483.20 TPM= 2.12 Transcript Type= NA
chr7	105014208	105074777	105014208	105074777	+	ENST00000495267.5@KMT2E	ENST00000495267.5	protein_coding	105014208,105040839,105062164,105063351,105066727,105073619,105074643	105014535,105041023,105062278,105063580,105066807,105073677,105074777	Gene ID= ENSG00000005483.20 TPM= 1.06 Transcript Type= protein_coding
chr7	105064166	105067491	105064166	105067491	-	transcript3934.chr7.nnic@NA	transcript3934.chr7.nnic	NA	105064166	105067491	Gene ID= novel_gene_chr7_3935 TPM= 35.05 Transcript Type= NA
chr7	105116376	105388922	105116376	105388922	-	transcript3902.chr7.nnic@SRPK2	transcript3902.chr7.nnic	protein_coding	105388791,105388648,105203628,105169157,105168008,105167377,105160507,105146520,105145283,105143084,105142008,105133004,105132791,105126993,105126248,105116376	105388922,105388702,105203785,105169265,105168095,105167464,105160613,105146658,105145308,105143330,105142490,105133104,105132898,105127062,105126340,105118022	Gene ID= ENSG00000135250.16 TPM= 2.47 Transcript Type= NA
chr7	105143298	105388922	105143298	105388922	-	transcript3918.chr7.nic@SRPK2	transcript3918.chr7.nic	protein_coding	105388791,105388648,105203628,105169157,105168008,105167377,105160507,105146493,105145283,105143298	105388922,105388702,105203785,105169265,105168095,105167464,105160613,105146658,105145308,105143330	Gene ID= ENSG00000135250.16 TPM= 2.12 Transcript Type= NA
chr7	105145283	105389394	105145283	105389394	-	transcript3921.chr7.nic@SRPK2	transcript3921.chr7.nic	protein_coding	105389244,105388648,105268806,105203628,105169157,105168008,105167377,105160507,105146493,105145283	105389394,105388702,105268869,105203785,105169265,105168095,105167464,105160613,105146658,105145308	Gene ID= ENSG00000135250.16 TPM= 3.9 Transcript Type= NA
chr7	105145283	105389394	105145283	105389394	-	transcript3924.chr7.nic@SRPK2	transcript3924.chr7.nic	protein_coding	105389244,105388648,105203628,105169157,105168008,105167377,105160507,105146493,105145283	105389394,105388702,105203785,105169265,105168095,105167464,105160613,105146658,105145308	Gene ID= ENSG00000135250.16 TPM= 4.96 Transcript Type= NA
chr7	105387504	105388922	105387504	105388922	-	transcript3932.chr7.nic@SRPK2	transcript3932.chr7.nic	protein_coding	105388791,105387504	105388922,105388702	Gene ID= ENSG00000135250.16 TPM= 5.31 Transcript Type= NA
chr7	105116376	105388894	105116376	105388894	-	ENST00000393651.7@SRPK2	ENST00000393651.7	protein_coding	105388791,105388648,105203628,105169157,105168008,105167377,105160507,105146493,105145283,105143084,105142008,105133004,105132791,105126993,105126248,105116376	105388894,105388702,105203785,105169265,105168095,105167464,105160613,105146658,105145308,105143330,105142490,105133104,105132898,105127062,105126340,105118022	Gene ID= ENSG00000135250.16 TPM= 7.79 Transcript Type= protein_coding
chr7	105116377	105269015	105116377	105269015	-	ENST00000357311.7@SRPK2	ENST00000357311.7	protein_coding	105268806,105203628,105169157,105168008,105167377,105160507,105146493,105145283,105143084,105142008,105133004,105132791,105126993,105126248,105116377	105269015,105203785,105169265,105168095,105167464,105160613,105146658,105145308,105143330,105142490,105133104,105132898,105127062,105126340,105118022	Gene ID= ENSG00000135250.16 TPM= 3.54 Transcript Type= protein_coding
chr7	105456511	105522258	105456511	105522258	-	ENST00000356362.6@PUS7	ENST00000356362.6	protein_coding	105522052,105508115,105506189,105505955,105502420,105495142,105491540,105482312,105481052,105472132,105470688,105468337,105465313,105462621,105459168,105456511	105522258,105508520,105506273,105506056,105502564,105495253,105491617,105482440,105481177,105472193,105470848,105468463,105465414,105462750,105459259,105457926	Gene ID= ENSG00000091127.13 TPM= 3.19 Transcript Type= protein_coding
chr7	105532085	105567677	105532085	105567677	+	ENST00000257700.6@RINT1	ENST00000257700.6	protein_coding	105532085,105532824,105536565,105542408,105546910,105547184,105548554,105550055,105550261,105551570,105555028,105563733,105565277,105565530,105567119	105532357,105532869,105536749,105542649,105547083,105547333,105548710,105550165,105550486,105551707,105555227,105563947,105565457,105565648,105567677	Gene ID= ENSG00000135249.7 TPM= 18.06 Transcript Type= protein_coding
chr7	105532171	105567676	105532171	105567676	+	transcript3946.chr7.nnic@RINT1	transcript3946.chr7.nnic	protein_coding	105532171,105532824,105536565,105542408,105546910,105547184,105548554,105550055,105550261,105551570,105563733,105565277,105565530,105567119	105532357,105532869,105536749,105542649,105547083,105547333,105548710,105550165,105550486,105551707,105563947,105565457,105565648,105567676	Gene ID= ENSG00000135249.7 TPM= 3.19 Transcript Type= NA
chr7	105760949	105761184	105760949	105761184	-	transcript3948.chr7.nnic@NA	transcript3948.chr7.nnic	NA	105760949	105761184	Gene ID= novel_gene_chr7_3949 TPM= 2.12 Transcript Type= NA
chr7	106090505	106112576	106090505	106112576	-	ENST00000011473.6@SYPL1	ENST00000011473.6	protein_coding	106112479,106112140,106099158,106097690,106092949,106090505	106112576,106112211,106099282,106097897,106093137,106091939	Gene ID= ENSG00000008282.8 TPM= 10.44 Transcript Type= protein_coding
chr7	106090509	106112317	106090509	106112317	-	transcript3952.chr7.nic@SYPL1	transcript3952.chr7.nic	protein_coding	106112140,106099158,106097690,106092949,106092548,106090509	106112317,106099282,106097897,106093137,106092669,106091939	Gene ID= ENSG00000008282.8 TPM= 6.72 Transcript Type= NA
chr7	106090503	106112331	106090503	106112331	-	ENST00000455385.6@SYPL1	ENST00000455385.6	protein_coding	106112140,106099158,106097690,106092949,106090503	106112331,106099282,106097897,106093137,106091939	Gene ID= ENSG00000008282.8 TPM= 130.47 Transcript Type= protein_coding
chr7	106250043	106284576	106250043	106284576	-	transcript3961.chr7.nic@NAMPT	transcript3961.chr7.nic	protein_coding	106284348,106277023,106274946,106272530,106269154,106268464,106263392,106261588,106254364,106253017,106250043	106284576,106277179,106275049,106272658,106269312,106268600,106263617,106261707,106254504,106253151,106251193	Gene ID= ENSG00000105835.11 TPM= 7.44 Transcript Type= NA
chr7	106248285	106285192	106248285	106285192	-	ENST00000222553.7@NAMPT	ENST00000222553.7	protein_coding	106284828,106277023,106274946,106272530,106269154,106268464,106263392,106261588,106254364,106253017,106248285	106285192,106277179,106275049,106272658,106269312,106268600,106263617,106261707,106254504,106253151,106251193	Gene ID= ENSG00000105835.11 TPM= 27.62 Transcript Type= protein_coding
chr7	106656765	106660996	106656765	106660996	-	ENST00000523505.1@CCDC71L	ENST00000523505.1	protein_coding	106656765	106660996	Gene ID= ENSG00000253276.2 TPM= 1.06 Transcript Type= protein_coding
chr7	106659317	106660926	106659317	106660926	-	ENST00000315965.6@CCDC71L	ENST00000315965.6	protein_coding	106660592,106660555,106659317	106660926,106660558,106660552	Gene ID= ENSG00000253276.2 TPM= 4.25 Transcript Type= protein_coding
chr7	107044664	107150968	107044664	107150968	+	transcript3981.chr7.nic@PRKAR2B	transcript3981.chr7.nic	protein_coding	107044664,107070281,107121952,107128212,107140847,107146308,107150922	107045214,107070316,107122004,107128295,107140953,107146461,107150968	Gene ID= ENSG00000005249.12 TPM= 8.5 Transcript Type= NA
chr7	107044649	107161811	107044649	107161811	+	ENST00000265717.4@PRKAR2B	ENST00000265717.4	protein_coding	107044649,107070281,107121952,107128212,107140847,107146308,107150922,107153177,107156984,107157186,107159449	107045214,107070316,107122004,107128295,107140953,107146461,107151023,107153251,107157049,107157324,107161811	Gene ID= ENSG00000005249.12 TPM= 19.12 Transcript Type= protein_coding
chr7	107168961	107202508	107168961	107202508	+	ENST00000468410.5@HBP1	ENST00000468410.5	protein_coding	107168961,107179879,107182373,107185801,107186361,107186569,107189292,107190173,107195834,107200160,107201414	107169027,107180062,107182601,107185942,107186472,107186681,107189448,107190317,107196151,107200301,107202508	Gene ID= ENSG00000105856.13 TPM= 22.84 Transcript Type= protein_coding
chr7	107169015	107202529	107169015	107202529	+	ENST00000222574.8@HBP1	ENST00000222574.8	protein_coding	107169015,107179879,107182373,107185801,107186361,107186569,107189292,107190173,107195834,107200160,107201414	107169185,107180062,107182601,107185942,107186472,107186681,107189448,107190317,107196151,107200301,107202529	Gene ID= ENSG00000105856.13 TPM= 11.15 Transcript Type= protein_coding
chr7	107202564	107564514	107202564	107564514	-	ENST00000297135.7@COG5	ENST00000297135.7	protein_coding	107563803,107557976,107554285,107548278,107548111,107527237,107412502,107372595,107362308,107362033,107324440,107298142,107283571,107281300,107258273,107256732,107248396,107236450,107230615,107211099,107210526,107202564	107564514,107558115,107554342,107548332,107548180,107527357,107412632,107372760,107362420,107362110,107324521,107298346,107283732,107281399,107258383,107256794,107248499,107236687,107230691,107211225,107210605,107203630	Gene ID= ENSG00000164597.13 TPM= 5.31 Transcript Type= protein_coding
chr7	107470060	107475659	107470060	107475659	+	ENST00000304402.5@GPR22	ENST00000304402.5	protein_coding	107470060,107471372,107474035	107470445,107472302,107475659	Gene ID= ENSG00000172209.5 TPM= 1.06 Transcript Type= protein_coding
chr7	107563949	107577909	107563949	107577909	+	transcript4009.chr7.nic@DUS4L	transcript4009.chr7.nic	protein_coding	107563949,107564588,107567050,107571145,107573704,107575188,107576366,107577313	107564059,107564676,107567186,107571266,107573821,107575310,107576592,107577909	Gene ID= ENSG00000105865.10 TPM= 2.12 Transcript Type= NA
chr7	107579942	107619446	107579942	107619446	+	transcript4032.chr7.nnic@BCAP29	transcript4032.chr7.nnic	protein_coding	107579942,107580759,107583882,107593955,107595867,107600397,107613332,107618328	107580070,107580864,107583982,107594105,107596002,107600505,107613432,107619446	Gene ID= ENSG00000075790.10 TPM= 6.37 Transcript Type= NA
chr7	107579977	107621870	107579977	107621870	+	ENST00000005259.8@BCAP29	ENST00000005259.8	protein_coding	107579977,107580759,107583882,107593955,107595867,107600397,107613332,107618328	107580301,107580864,107583982,107594105,107596002,107600505,107613432,107621870	Gene ID= ENSG00000075790.10 TPM= 10.62 Transcript Type= protein_coding
chr7	107580204	107601889	107580204	107601889	+	transcript4049.chr7.nic@BCAP29	transcript4049.chr7.nic	protein_coding	107580204,107580759,107583882,107593955,107595867,107600397	107580301,107580864,107583982,107594105,107596002,107601889	Gene ID= ENSG00000075790.10 TPM= 6.37 Transcript Type= NA
chr7	107603116	107604963	107603116	107604963	+	transcript4052.chr7.nnic@NA	transcript4052.chr7.nnic	NA	107603116	107604963	Gene ID= novel_gene_chr7_4053 TPM= 7.44 Transcript Type= NA
chr7	107626701	107628108	107626701	107628108	-	transcript4054.chr7.nnic@NA	transcript4054.chr7.nnic	NA	107626701	107628108	Gene ID= novel_gene_chr7_4055 TPM= 2.12 Transcript Type= NA
chr7	107742814	107744055	107742814	107744055	-	transcript4062.chr7.nnic@NA	transcript4062.chr7.nnic	NA	107742814	107744055	Gene ID= novel_gene_chr7_4063 TPM= 2.12 Transcript Type= NA
chr7	107890970	107921203	107890970	107921203	+	ENST00000205402.9@DLD	ENST00000205402.9	protein_coding	107890970,107893200,107901738,107902325,107903478,107904958,107905361,107906267,107915506,107916794,107917273,107917924,107919010,107919194	107891289,107893278,107901817,107902393,107903547,107905058,107905504,107906368,107915696,107916964,107917462,107918061,107919099,107921203	Gene ID= ENSG00000091140.13 TPM= 15.4 Transcript Type= protein_coding
chr7	107891172	107903569	107891172	107903569	+	ENST00000639772.1@DLD	ENST00000639772.1	protein_coding	107891172,107893200,107901738,107902325,107903478,107903565	107891289,107893278,107901817,107902393,107903547,107903569	Gene ID= ENSG00000091140.13 TPM= 1.59 Transcript Type= protein_coding
chr7	107923803	108002027	107923803	108002027	-	ENST00000393561.5@LAMB1	ENST00000393561.5	protein_coding	108001558,107998357,107994887,107986175,107986022,107980609,107978047,107975689,107975234,107974986,107972992,107964552,107962905,107961549,107961206,107960445,107959691,107959249,107955467,107953530,107952009,107951226,107939989,107937093,107935415,107932174,107931356,107929412,107929064,107926183,107924230,107923803	108002027,107998492,107994960,107986363,107986085,107980811,107978167,107975877,107975413,107975098,107973071,107964687,107963063,107961676,107961329,107960649,107959834,107959480,107955630,107953754,107952223,107951322,107940358,107937277,107935656,107932377,107931500,107929619,107929205,107926359,107924389,107924087	Gene ID= ENSG00000091136.13 TPM= 25.49 Transcript Type= protein_coding
chr7	108471661	108526318	108471661	108526318	-	ENST00000436062.5@PNPLA8	ENST00000436062.5	protein_coding	108526029,108514436,108514144,108502491,108497483,108496584,108491410,108487759,108479184,108471661	108526318,108515574,108514293,108502642,108497577,108496755,108491467,108487953,108479379,108472675	Gene ID= ENSG00000135241.16 TPM= 5.84 Transcript Type= protein_coding
chr7	108471627	108526315	108471627	108526315	-	ENST00000453144.5@PNPLA8	ENST00000453144.5	protein_coding	108526029,108514436,108514144,108502491,108497483,108496584,108491410,108487759,108479184,108471627	108526315,108515447,108514293,108502642,108497577,108496755,108491467,108487953,108479379,108472675	Gene ID= ENSG00000135241.16 TPM= 1.59 Transcript Type= protein_coding
chr7	108562227	108569723	108562227	108569723	-	ENST00000415914.3@THAP5	ENST00000415914.3	protein_coding	108569490,108565830,108562227	108569723,108566022,108565105	Gene ID= ENSG00000177683.13 TPM= 9.56 Transcript Type= protein_coding
chr7	108569568	108574850	108569568	108574850	+	ENST00000249356.3@DNAJB9	ENST00000249356.3	protein_coding	108569568,108571717,108572899	108570103,108571943,108574850	Gene ID= ENSG00000128590.4 TPM= 125.33 Transcript Type= protein_coding
chr7	111091006	111124932	111091006	111124932	+	ENST00000308478.9@LRRN3	ENST00000308478.9	protein_coding	111091006,111099881,111122415	111091504,111099962,111124932	Gene ID= ENSG00000173114.12 TPM= 1.06 Transcript Type= protein_coding
chr7	111091032	111125454	111091032	111125454	+	ENST00000422987.3@LRRN3	ENST00000422987.3	protein_coding	111091032,111122415	111091504,111125454	Gene ID= ENSG00000173114.12 TPM= 1.06 Transcript Type= protein_coding
chr7	111482190	111484859	111482190	111484859	+	transcript4122.chr7.nnic@NA	transcript4122.chr7.nnic	NA	111482190	111484859	Gene ID= novel_gene_chr7_4123 TPM= 2.12 Transcript Type= NA
chr7	112206588	112343096	112206588	112343096	+	ENST00000361822.7@ZNF277	ENST00000361822.7	protein_coding	112206588,112286873,112295869,112296229,112318182,112327717,112330084,112336104,112337730,112339843,112340872,112342561	112206807,112287074,112295957,112296311,112318273,112327827,112330216,112336171,112337826,112339885,112341046,112343096	Gene ID= ENSG00000198839.9 TPM= 5.31 Transcript Type= protein_coding
chr7	112206711	112343023	112206711	112343023	+	transcript4135.chr7.nic@ZNF277	transcript4135.chr7.nic	protein_coding	112206711,112286873,112296229,112318182,112327717,112330084,112336104,112337730,112339843,112340872,112342561	112206807,112287074,112296311,112318273,112327827,112330216,112336171,112337826,112339885,112341046,112343023	Gene ID= ENSG00000198839.9 TPM= 2.12 Transcript Type= NA
chr7	112206697	112288979	112206697	112288979	+	ENST00000421043.5@ZNF277	ENST00000421043.5	protein_coding	112206697,112286873	112206807,112288979	Gene ID= ENSG00000198839.9 TPM= 1.06 Transcript Type= protein_coding
chr7	112450428	112476192	112450428	112476192	+	ENST00000403825.7@IFRD1	ENST00000403825.7	protein_coding	112450428,112455763,112456002,112456914,112458861,112461866,112462001,112462270,112467981,112472219,112472766,112475430	112450782,112455867,112456086,112457038,112459018,112461916,112462179,112462378,112468115,112472347,112472861,112476192	Gene ID= ENSG00000006652.13 TPM= 55.23 Transcript Type= protein_coding
chr7	112450458	112458336	112450458	112458336	+	ENST00000429071.5@IFRD1	ENST00000429071.5	protein_coding	112450458,112455763,112456002,112456914	112450782,112455867,112456086,112458336	Gene ID= ENSG00000006652.13 TPM= 4.25 Transcript Type= protein_coding
chr7	112460242	112469437	112460242	112469437	+	transcript4148.chr7.nic@IFRD1	transcript4148.chr7.nic	protein_coding	112460242,112462001,112462270,112467981	112461916,112462179,112462378,112469437	Gene ID= ENSG00000006652.13 TPM= 11.68 Transcript Type= NA
chr7	112450461	112453877	112450461	112453877	+	transcript4151.chr7.nnic@NA	transcript4151.chr7.nnic	NA	112450461	112453877	Gene ID= novel_gene_chr7_4152 TPM= 2.12 Transcript Type= NA
chr7	112455427	112457132	112455427	112457132	-	transcript4153.chr7.nnic@NA	transcript4153.chr7.nnic	NA	112455427	112457132	Gene ID= novel_gene_chr7_4154 TPM= 2.12 Transcript Type= NA
chr7	112484731	112490887	112484731	112490887	+	transcript4157.chr7.nic@LSMEM1	transcript4157.chr7.nic	protein_coding	112484731,112486923,112489810	112484943,112487051,112490887	Gene ID= ENSG00000181016.9 TPM= 6.37 Transcript Type= NA
chr7	112762382	112790592	112762382	112790592	-	ENST00000312814.10@TMEM168	ENST00000312814.10	protein_coding	112790160,112783698,112775176,112772781,112762382	112790592,112784953,112775318,112773055,112767744	Gene ID= ENSG00000146802.12 TPM= 1.06 Transcript Type= protein_coding
chr7	112765736	112790390	112765736	112790390	-	transcript4164.chr7.nnic@TMEM168	transcript4164.chr7.nnic	protein_coding	112790160,112776193,112775176,112772781,112765736	112790390,112776327,112775318,112773055,112767744	Gene ID= ENSG00000146802.12 TPM= 6.37 Transcript Type= NA
chr7	112780117	112780963	112780117	112780963	+	transcript4171.chr7.nnic@NA	transcript4171.chr7.nnic	NA	112780117	112780963	Gene ID= novel_gene_chr7_4172 TPM= 5.31 Transcript Type= NA
chr7	112819147	112939916	112819147	112939916	-	ENST00000297145.8@BMT2	ENST00000297145.8	protein_coding	112939591,112915306,112895569,112832561,112819147	112939916,112915447,112895739,112832675,112822373	Gene ID= ENSG00000164603.11 TPM= 45.67 Transcript Type= protein_coding
chr7	112953795	112995596	112953795	112995596	-	transcript4186.chr7.nnic@HRAT17	transcript4186.chr7.nnic	lincRNA	112995568,112986536,112956522,112953795	112995596,112986664,112956711,112954768	Gene ID= ENSG00000234520.5 TPM= 2.12 Transcript Type= NA
chr7	112954646	112995598	112954646	112995598	-	transcript4188.chr7.nnic@HRAT17	transcript4188.chr7.nnic	lincRNA	112995568,112973605,112956522,112954646	112995598,112973672,112956702,112954768	Gene ID= ENSG00000234520.5 TPM= 2.39 Transcript Type= NA
chr7	112953287	112995658	112953287	112995658	-	transcript4198.chr7.nnic@HRAT17	transcript4198.chr7.nnic	lincRNA	112995568,112956522,112953287	112995658,112956711,112954768	Gene ID= ENSG00000234520.5 TPM= 4.25 Transcript Type= NA
chr7	112954646	112977344	112954646	112977344	-	transcript4206.chr7.nnic@HRAT17	transcript4206.chr7.nnic	lincRNA	112977144,112956522,112954646	112977344,112956711,112954768	Gene ID= ENSG00000234520.5 TPM= 4.51 Transcript Type= NA
chr7	112954646	112995668	112954646	112995668	-	transcript4209.chr7.nnic@HRAT17	transcript4209.chr7.nnic	lincRNA	112995568,112956522,112954646	112995668,112956774,112954768	Gene ID= ENSG00000234520.5 TPM= 3.45 Transcript Type= NA
chr7	112981647	112984980	112981647	112984980	+	transcript4213.chr7.nnic@NA	transcript4213.chr7.nnic	NA	112981647	112984980	Gene ID= novel_gene_chr7_4214 TPM= 3.19 Transcript Type= NA
chr7	112989690	112993782	112989690	112993782	+	transcript4211.chr7.nnic@NA	transcript4211.chr7.nnic	NA	112989690,112990775	112990709,112993782	Gene ID= novel_gene_chr7_4212 TPM= 2.12 Transcript Type= NA
chr7	113116718	113118613	113116718	113118613	-	ENST00000397764.7@SMIM30	ENST00000397764.7	protein_coding	113118528,113118068,113116718	113118613,113118161,113117607	Gene ID= ENSG00000214194.8 TPM= 41.42 Transcript Type= protein_coding
chr7	113876838	113918930	113876838	113918930	-	transcript4225.chr7.nnic@PPP1R3A	transcript4225.chr7.nnic	protein_coding	113918567,113918215,113882262,113882039,113876838	113918930,113918297,113882320,113882163,113880125	Gene ID= ENSG00000154415.7 TPM= 4.25 Transcript Type= NA
chr7	113876777	113919065	113876777	113919065	-	ENST00000284601.3@PPP1R3A	ENST00000284601.3	protein_coding	113918215,113882262,113882039,113876777	113919065,113882320,113882163,113880125	Gene ID= ENSG00000154415.7 TPM= 5.31 Transcript Type= protein_coding
chr7	114922182	115018744	114922182	115018744	+	transcript4245.chr7.nnic@MDFIC	transcript4245.chr7.nnic	protein_coding	114922182,114922927,114979506,115015688	114922636,114923127,114979781,115018744	Gene ID= ENSG00000135272.10 TPM= 10.09 Transcript Type= NA
chr7	114922163	114923652	114922163	114923652	+	transcript4251.chr7.nic@MDFIC	transcript4251.chr7.nic	protein_coding	114922163,114922927	114922636,114923652	Gene ID= ENSG00000135272.10 TPM= 5.84 Transcript Type= NA
chr7	116209234	116211511	116209234	116211511	-	ENST00000624389.1@AC073130.3	ENST00000624389.1	TEC	116209234	116211511	Gene ID= ENSG00000279086.1 TPM= 1.06 Transcript Type= TEC
chr7	116210493	116258783	116210493	116258783	+	ENST00000358204.8@TES	ENST00000358204.8	protein_coding	116210493,116234534,116249020,116250161,116251760,116252318,116257294	116210734,116234619,116249272,116250496,116251975,116252476,116258783	Gene ID= ENSG00000135269.17 TPM= 39.3 Transcript Type= protein_coding
chr7	116499390	116508541	116499390	116508541	+	ENST00000222693.4@CAV2	ENST00000222693.4	protein_coding	116499390,116500260,116505971	116499931,116500447,116508541	Gene ID= ENSG00000105971.14 TPM= 684.74 Transcript Type= protein_coding
chr7	116499780	116501286	116499780	116501286	+	ENST00000393480.3@CAV2	ENST00000393480.3	protein_coding	116499780,116500260	116499931,116501286	Gene ID= ENSG00000105971.14 TPM= 3.19 Transcript Type= protein_coding
chr7	116524785	116561176	116524785	116561176	+	ENST00000341049.6@CAV1	ENST00000341049.6	protein_coding	116524785,116526525,116558946	116525092,116526689,116561176	Gene ID= ENSG00000105974.11 TPM= 69.84 Transcript Type= protein_coding
chr7	116525009	116559636	116525009	116559636	+	ENST00000451122.5@CAV1	ENST00000451122.5	protein_coding	116525009,116526525,116558946	116525805,116526689,116559636	Gene ID= ENSG00000105974.11 TPM= 37.18 Transcript Type= nonsense_mediated_decay
chr7	116525009	116561184	116525009	116561184	+	ENST00000614113.4@CAV1	ENST00000614113.4	protein_coding	116525009,116526525,116558946	116525805,116526689,116561184	Gene ID= ENSG00000105974.11 TPM= 58.15 Transcript Type= protein_coding
chr7	116526277	116559513	116526277	116559513	+	ENST00000393468.1@CAV1	ENST00000393468.1	protein_coding	116526277,116526525,116558946	116526388,116526689,116559513	Gene ID= ENSG00000105974.11 TPM= 1.06 Transcript Type= protein_coding
chr7	116526293	116561176	116526293	116561176	+	ENST00000393467.1@CAV1	ENST00000393467.1	protein_coding	116526293,116558946	116526689,116561176	Gene ID= ENSG00000105974.11 TPM= 164.37 Transcript Type= protein_coding
chr7	116672392	116798386	116672392	116798386	+	ENST00000397752.7@MET	ENST00000397752.7	protein_coding	116672392,116699071,116731668,116739950,116740852,116755355,116757437,116757638,116758459,116759391,116763050,116769645,116771498,116771849,116774881,116777389,116778776,116781988,116783304,116795655,116795887	116672577,116700284,116731859,116740084,116741025,116755515,116757539,116757774,116758620,116759490,116763268,116769791,116771654,116771989,116775111,116777469,116778957,116782097,116783469,116795791,116798386	Gene ID= ENSG00000105976.14 TPM= 4.25 Transcript Type= protein_coding
chr7	116862473	116922049	116862473	116922049	+	ENST00000361183.7@CAPZA2	ENST00000361183.7	protein_coding	116862473,116888127,116892994,116898772,116904177,116906263,116910233,116912069,116916060,116917727	116862650,116888190,116893045,116898835,116904383,116906342,116910311,116912140,116916122,116922049	Gene ID= ENSG00000198898.13 TPM= 8.5 Transcript Type= protein_coding
chr7	116862600	116904754	116862600	116904754	+	ENST00000490693.5@CAPZA2	ENST00000490693.5	protein_coding	116862600,116888127,116892994,116898772,116904177	116862650,116888190,116893045,116898835,116904754	Gene ID= ENSG00000198898.13 TPM= 2.12 Transcript Type= protein_coding
chr7	116862600	116918188	116862600	116918188	+	ENST00000426421.5@CAPZA2	ENST00000426421.5	protein_coding	116862600,116888127,116892994,116898772,116904177,116906263,116910213,116912069,116916060,116917727	116862650,116888190,116893045,116898835,116904383,116906342,116910311,116912140,116916122,116918188	Gene ID= ENSG00000198898.13 TPM= 1.06 Transcript Type= nonsense_mediated_decay
chr7	116865179	116867030	116865179	116867030	-	transcript4342.chr7.nnic@NA	transcript4342.chr7.nnic	NA	116865179	116867030	Gene ID= novel_gene_chr7_4343 TPM= 16.99 Transcript Type= NA
chr7	117014888	117230103	117014888	117230103	+	ENST00000432298.5@ST7	ENST00000432298.5	protein_coding	117014888,117099762,117119561,117129793,117130491,117131885,117134124,117136081,117138435,117170862,117189321,117190834,117209787,117219084,117221923,117229762	117015014,117099844,117119720,117129847,117130606,117131960,117134192,117136235,117138532,117170976,117189393,117190936,117209937,117219176,117222062,117230103	Gene ID= ENSG00000004866.20 TPM= 2.21 Transcript Type= protein_coding
chr7	116953327	117223907	116953327	117223907	+	ENST00000265437.9@ST7	ENST00000265437.9	protein_coding	116953327,117099762,117119561,117129793,117130491,117131885,117134124,117136081,117138435,117170862,117189321,117190834,117209787,117219084,117221923,117222861	116953691,117099844,117119720,117129847,117130606,117131960,117134192,117136235,117138532,117170976,117189393,117190936,117209937,117219176,117222062,117223907	Gene ID= ENSG00000004866.20 TPM= 8.76 Transcript Type= protein_coding
chr7	116953342	117230103	116953342	117230103	+	ENST00000393451.7@ST7	ENST00000393451.7	protein_coding	116953342,117099762,117119561,117129793,117130491,117131885,117136081,117138435,117170862,117189321,117190834,117209787,117219084,117221923,117229762	116953691,117099844,117119720,117129847,117130606,117131960,117136235,117138532,117170976,117189393,117190936,117209937,117219176,117222062,117230103	Gene ID= ENSG00000004866.20 TPM= 2.66 Transcript Type= protein_coding
chr7	116953379	117230103	116953379	117230103	+	ENST00000323984.7@ST7	ENST00000323984.7	protein_coding	116953379,117099762,117119561,117129793,117130491,117131885,117134124,117136081,117138435,117170862,117189321,117190834,117209787,117219084,117221923,117229762	116953691,117099844,117119720,117129847,117130606,117131960,117134192,117136235,117138532,117170976,117189393,117190936,117209937,117219176,117222062,117230103	Gene ID= ENSG00000004866.20 TPM= 4.33 Transcript Type= protein_coding
chr7	117020277	117230103	117020277	117230103	+	ENST00000393447.8@ST7	ENST00000393447.8	protein_coding	117020277,117099762,117119561,117129793,117130491,117131885,117134124,117136081,117138435,117170862,117189321,117190834,117209787,117219084,117221923,117229762	117020629,117099844,117119720,117129847,117130606,117131960,117134192,117136235,117138532,117170976,117189393,117190936,117209937,117219176,117222062,117230103	Gene ID= ENSG00000004866.20 TPM= 2.21 Transcript Type= protein_coding
chr7	116967120	116968528	116967120	116968528	-	transcript4362.chr7.nnic@NA	transcript4362.chr7.nnic	NA	116967120	116968528	Gene ID= novel_gene_chr7_4363 TPM= 2.12 Transcript Type= NA
chr7	116979960	116983592	116979960	116983592	-	transcript4358.chr7.nnic@NA	transcript4358.chr7.nnic	NA	116979960	116983592	Gene ID= novel_gene_chr7_4359 TPM= 7.44 Transcript Type= NA
chr7	116996084	116997900	116996084	116997900	-	transcript4360.chr7.nnic@NA	transcript4360.chr7.nnic	NA	116996084	116997900	Gene ID= novel_gene_chr7_4361 TPM= 3.19 Transcript Type= NA
chr7	118184032	118192824	118184032	118192824	+	ENST00000249299.6@LSM8	ENST00000249299.6	protein_coding	118184032,118185654,118188278,118191912	118184254,118185694,118188405,118192824	Gene ID= ENSG00000128534.7 TPM= 10.62 Transcript Type= protein_coding
chr7	118184156	118192164	118184156	118192164	+	ENST00000422760.1@LSM8	ENST00000422760.1	protein_coding	118184156,118188278,118191912	118185694,118188405,118192164	Gene ID= ENSG00000128534.7 TPM= 1.06 Transcript Type= protein_coding
chr7	120787320	120858154	120787320	120858154	-	transcript4370.chr7.nic@TSPAN12	transcript4370.chr7.nic	protein_coding	120857820,120856698,120840027,120838777,120815729,120814005,120810463,120806549,120787320	120858154,120856833,120840109,120838912,120815803,120814247,120810570,120806692,120788897	Gene ID= ENSG00000106025.8 TPM= 8.92 Transcript Type= NA
chr7	120787320	120858357	120787320	120858357	-	ENST00000222747.7@TSPAN12	ENST00000222747.7	protein_coding	120857820,120856698,120840027,120838777,120815729,120810463,120806549,120787320	120858357,120856833,120840109,120838912,120815803,120810570,120806692,120788897	Gene ID= ENSG00000106025.8 TPM= 128.95 Transcript Type= protein_coding
chr7	120787320	120858098	120787320	120858098	-	transcript4377.chr7.nnic@TSPAN12	transcript4377.chr7.nnic	protein_coding	120857820,120856698,120840027,120838777,120810463,120806549,120787320	120858098,120856833,120840109,120838912,120810570,120806692,120788897	Gene ID= ENSG00000106025.8 TPM= 4.67 Transcript Type= NA
chr7	120855114	120858083	120855114	120858083	-	transcript4380.chr7.nnic@TSPAN12	transcript4380.chr7.nnic	protein_coding	120857820,120856698,120855114	120858083,120856833,120855381	Gene ID= ENSG00000106025.8 TPM= 14.87 Transcript Type= NA
chr7	120950749	120977216	120950749	120977216	+	ENST00000315870.9@ING3	ENST00000315870.9	protein_coding	120950749,120951164,120953304,120955559,120964742,120966626,120967529,120967934,120969011,120970688,120973205,120974728	120950924,120951235,120953404,120955624,120964838,120966697,120967648,120968091,120969204,120970880,120973243,120977216	Gene ID= ENSG00000071243.15 TPM= 4.25 Transcript Type= protein_coding
chr7	120950795	120956978	120950795	120956978	+	ENST00000445699.5@ING3	ENST00000445699.5	protein_coding	120950795,120951164,120953304,120955559	120950924,120951235,120953404,120956978	Gene ID= ENSG00000071243.15 TPM= 1.06 Transcript Type= protein_coding
chr7	120950763	120956980	120950763	120956980	+	ENST00000339121.9@ING3	ENST00000339121.9	protein_coding	120950763,120951164,120953304,120955559,120956160	120950924,120951235,120953404,120955624,120956980	Gene ID= ENSG00000071243.15 TPM= 6.37 Transcript Type= protein_coding
chr7	120988677	121297444	120988677	121297444	+	ENST00000310396.9@CPED1	ENST00000310396.9	protein_coding	120988677,120989391,121015665,121046887,121064238,121097699,121099926,121124331,121125820,121127090,121128382,121130125,121133823,121136040,121140827,121141973,121236714,121244202,121266227,121266707,121267215,121271284,121295440	120988912,120989870,121015848,121046993,121064313,121097831,121100094,121124473,121125892,121127257,121128486,121130294,121133893,121136090,121141013,121142141,121236831,121244338,121266447,121266808,121267302,121271430,121297444	Gene ID= ENSG00000106034.17 TPM= 9.03 Transcript Type= protein_coding
chr7	120988719	121297444	120988719	121297444	+	transcript4395.chr7.nic@CPED1	transcript4395.chr7.nic	protein_coding	120988719,121015665,121046887,121064238,121097699,121099926,121124331,121125820,121127090,121128382,121130125,121133823,121136040,121140827,121141973,121236714,121244202,121266227,121266707,121267215,121271284,121295440	120989870,121015848,121046993,121064313,121097831,121100094,121124473,121125892,121127257,121128486,121130294,121133893,121136090,121141013,121142141,121236831,121244338,121266447,121266808,121267302,121271430,121297444	Gene ID= ENSG00000106034.17 TPM= 9.03 Transcript Type= NA
chr7	120988689	121261918	120988689	121261918	+	transcript4397.chr7.nic@CPED1	transcript4397.chr7.nic	protein_coding	120988689,120989391,121015665,121046887,121064238,121097699,121099926,121124331,121125820,121127090,121128382,121130125,121133823,121136040,121140827,121141973,121236714,121244202,121261632	120988912,120989870,121015848,121046993,121064313,121097831,121100094,121124473,121125892,121127257,121128486,121130294,121133893,121136090,121141013,121142141,121236831,121244338,121261918	Gene ID= ENSG00000106034.17 TPM= 3.19 Transcript Type= NA
chr7	121350009	121396323	121350009	121396323	-	transcript4410.chr7.nnic@FAM3C	transcript4410.chr7.nnic	protein_coding	121396162,121392868,121382957,121378910,121372110,121371300,121364130,121362897,121360043,121351143,121350009	121396323,121392927,121383010,121379014,121372139,121371423,121364188,121362947,121360127,121351269,121350550	Gene ID= ENSG00000196937.10 TPM= 3.19 Transcript Type= NA
chr7	121348851	121396334	121348851	121396334	-	ENST00000359943.7@FAM3C	ENST00000359943.7	protein_coding	121396162,121382957,121378910,121372110,121371300,121364130,121362897,121360043,121351143,121348851	121396334,121383010,121379014,121372139,121371423,121364188,121362947,121360127,121351269,121350550	Gene ID= ENSG00000196937.10 TPM= 75.41 Transcript Type= protein_coding
chr7	122076242	122144280	122076242	122144280	-	ENST00000417368.6@AASS	ENST00000417368.6	protein_coding	122144161,122133517,122129361,122126375,122118563,122118307,122116879,122116633,122115074,122113598,122113118,122101621,122101371,122098745,122098450,122093048,122092843,122091703,122086012,122081500,122079597,122078862,122077838,122076242	122144280,122133741,122129537,122126459,122118630,122118453,122116957,122116760,122115222,122113720,122113229,122101680,122101438,122098866,122098576,122093158,122092951,122091843,122086179,122081595,122079712,122078950,122078014,122076607	Gene ID= ENSG00000008311.14 TPM= 1.06 Transcript Type= protein_coding
chr7	123536997	123557780	123536997	123557780	-	ENST00000471770.5@NDUFA5	ENST00000471770.5	protein_coding	123557625,123557404,123550470,123545611,123536997	123557780,123557448,123550586,123545676,123542220	Gene ID= ENSG00000128609.14 TPM= 1.59 Transcript Type= protein_coding
chr7	123541029	123558255	123541029	123558255	-	ENST00000355749.6@NDUFA5	ENST00000355749.6	protein_coding	123557775,123557404,123550470,123545611,123541029	123558255,123557448,123550586,123545676,123542220	Gene ID= ENSG00000128609.14 TPM= 466.82 Transcript Type= protein_coding
chr7	123541030	123557904	123541030	123557904	-	ENST00000611607.4@NDUFA5	ENST00000611607.4	protein_coding	123557775,123550470,123545611,123541030	123557904,123550586,123545676,123542220	Gene ID= ENSG00000128609.14 TPM= 27.62 Transcript Type= protein_coding
chr7	123541096	123557455	123541096	123557455	-	ENST00000378795.8@NDUFA5	ENST00000378795.8	protein_coding	123557404,123550470,123545611,123541096	123557455,123550586,123545676,123542220	Gene ID= ENSG00000128609.14 TPM= 2.12 Transcript Type= protein_coding
chr7	123580157	123581430	123580157	123581430	+	transcript4445.chr7.nnic@NA	transcript4445.chr7.nnic	NA	123580157	123581430	Gene ID= novel_gene_chr7_4446 TPM= 5.31 Transcript Type= NA
chr7	123601821	123637878	123601821	123637878	+	transcript4447.chr7.nnic@ASB15	transcript4447.chr7.nnic	protein_coding	123601821,123604032,123608594,123612276,123614501,123616221,123616364,123617579,123624569,123627110,123628864,123629966,123636809	123601914,123604212,123608654,123612400,123614609,123616273,123616495,123617737,123624814,123627281,123629434,123630119,123637878	Gene ID= ENSG00000146809.12 TPM= 4.25 Transcript Type= NA
chr7	123601820	123637878	123601820	123637878	+	transcript4450.chr7.nnic@ASB15	transcript4450.chr7.nnic	protein_coding	123601820,123604032,123612276,123614501,123616221,123616364,123617579,123624569,123627110,123628864,123629966,123636809	123601914,123604212,123612400,123614609,123616273,123616495,123617737,123624814,123627281,123629434,123630119,123637878	Gene ID= ENSG00000146809.12 TPM= 2.12 Transcript Type= NA
chr7	123601821	123637878	123601821	123637878	+	transcript4452.chr7.nic@ASB15	transcript4452.chr7.nic	protein_coding	123601821,123604032,123614501,123616221,123616364,123617579,123624569,123627110,123628864,123629966,123636809	123601914,123604212,123614609,123616273,123616495,123617737,123624814,123627281,123629434,123630119,123637878	Gene ID= ENSG00000146809.12 TPM= 2.12 Transcript Type= NA
chr7	123601867	123637878	123601867	123637878	+	ENST00000451215.5@ASB15	ENST00000451215.5	protein_coding	123601867,123604032,123608594,123614501,123616221,123616364,123617579,123624569,123627110,123628864,123629966,123636809	123601914,123604212,123608654,123614609,123616273,123616495,123617737,123624814,123627281,123629434,123630119,123637878	Gene ID= ENSG00000146809.12 TPM= 5.31 Transcript Type= protein_coding
chr7	123655807	123664290	123655807	123664290	+	ENST00000458573.2@LMOD2	ENST00000458573.2	protein_coding	123655807,123661860,123663719	123656236,123663203,123664290	Gene ID= ENSG00000170807.11 TPM= 124.27 Transcript Type= protein_coding
chr7	123657601	123659197	123657601	123659197	-	transcript4489.chr7.nnic@NA	transcript4489.chr7.nnic	NA	123657601	123659197	Gene ID= novel_gene_chr7_4490 TPM= 10.62 Transcript Type= NA
chr7	123696645	123749161	123696645	123749161	-	transcript4495.chr7.nic@WASL	transcript4495.chr7.nic	protein_coding	123748618,123709089,123706740,123706277,123704634,123696645	123749161,123709223,123706826,123706373,123704657,123696747	Gene ID= ENSG00000106299.7 TPM= 6.37 Transcript Type= NA
chr7	123681935	123749067	123681935	123749067	-	ENST00000223023.4@WASL	ENST00000223023.4	protein_coding	123748618,123709089,123706740,123706277,123704634,123696579,123695823,123694715,123692347,123689042,123681935	123749067,123709223,123706826,123706373,123704657,123696747,123695865,123694868,123692867,123689150,123684580	Gene ID= ENSG00000106299.7 TPM= 45.67 Transcript Type= protein_coding
chr7	123736536	123743352	123736536	123743352	+	transcript4497.chr7.nnic@NA	transcript4497.chr7.nnic	NA	123736536	123743352	Gene ID= novel_gene_chr7_4498 TPM= 3.19 Transcript Type= NA
chr7	123749045	123749984	123749045	123749984	+	transcript4499.chr7.nnic@NA	transcript4499.chr7.nnic	NA	123749045	123749984	Gene ID= novel_gene_chr7_4500 TPM= 2.12 Transcript Type= NA
chr7	123749195	123750945	123749195	123750945	+	transcript4501.chr7.nnic@NA	transcript4501.chr7.nnic	NA	123749195	123750945	Gene ID= novel_gene_chr7_4502 TPM= 2.12 Transcript Type= NA
chr7	123790605	123790711	123790605	123790711	-	ENST00000364234.1@RNU6-11P	ENST00000364234.1	snRNA	123790605	123790711	Gene ID= ENSG00000201104.1 TPM= 7.44 Transcript Type= snRNA
chr7	124030916	124033023	124030916	124033023	-	ENST00000455783.2@TMEM229A	ENST00000455783.2	protein_coding	124030916	124033023	Gene ID= ENSG00000234224.2 TPM= 2.12 Transcript Type= protein_coding
chr7	124822386	124929981	124822386	124929981	-	ENST00000357628.7@POT1	ENST00000357628.7	protein_coding	124929794,124928815,124915574,124898261,124897165,124892266,124870911,124863350,124858957,124852972,124851872,124846942,124842807,124840973,124835279,124829254,124827214,124825252,124822386	124929981,124928999,124915646,124898374,124897212,124892380,124871041,124863640,124859112,124853138,124851951,124846998,124842963,124841178,124835414,124829342,124827305,124825357,124824074	Gene ID= ENSG00000128513.14 TPM= 1.06 Transcript Type= protein_coding
chr7	124895240	124896078	124895240	124896078	+	transcript4519.chr7.nnic@NA	transcript4519.chr7.nnic	NA	124895240	124896078	Gene ID= novel_gene_chr7_4520 TPM= 3.19 Transcript Type= NA
chr7	127343376	127345807	127343376	127345807	-	transcript4522.chr7.nnic@NA	transcript4522.chr7.nnic	NA	127343376	127345807	Gene ID= novel_gene_chr7_4523 TPM= 3.19 Transcript Type= NA
chr7	127346721	127347390	127346721	127347390	-	transcript4524.chr7.nnic@NA	transcript4524.chr7.nnic	NA	127346721	127347390	Gene ID= novel_gene_chr7_4525 TPM= 6.37 Transcript Type= NA
chr7	127373928	127392694	127373928	127392694	-	ENST00000619291.4@ZNF800	ENST00000619291.4	protein_coding	127392060,127391497,127386060,127377186,127374328,127373928	127392694,127391615,127386155,127377329,127375034,127374325	Gene ID= ENSG00000048405.9 TPM= 2.12 Transcript Type= protein_coding
chr7	127580618	127585607	127580618	127585607	-	ENST00000321407.2@GCC1	ENST00000321407.2	protein_coding	127584151,127580618	127585607,127583309	Gene ID= ENSG00000179562.2 TPM= 18.06 Transcript Type= protein_coding
chr7	127588345	127591705	127588345	127591705	+	ENST00000000233.9@ARF5	ENST00000000233.9	protein_coding	127588345,127589083,127589485,127590066,127590963,127591213	127588565,127589163,127589594,127590137,127591088,127591705	Gene ID= ENSG00000004059.10 TPM= 164.63 Transcript Type= protein_coding
chr7	127652180	128092607	127652180	128092607	+	ENST00000354725.7@SND1	ENST00000354725.7	protein_coding	127652180,127686613,127694828,127698875,127701163,127702435,127703165,127704839,127707557,127721287,127807484,127844324,127887902,127904747,127929188,127990947,128074502,128081360,128084724,128085711,128086938,128089489,128091837,128091993	127652451,127686762,127694948,127698953,127701323,127702526,127703323,127704945,127707647,127721400,127807573,127844424,127888012,127904819,127929329,127991056,128074690,128081501,128084847,128085780,128087051,128089692,128091881,128092607	Gene ID= ENSG00000197157.10 TPM= 166.76 Transcript Type= protein_coding
chr7	128028509	128030514	128028509	128030514	-	transcript4547.chr7.nnic@NA	transcript4547.chr7.nnic	NA	128028509	128030514	Gene ID= novel_gene_chr7_4548 TPM= 2.12 Transcript Type= NA
chr7	128310397	128343911	128310397	128343911	-	transcript4556.chr7.nnic@RBM28	transcript4556.chr7.nnic	protein_coding	128343676,128339633,128339227,128338726,128338250,128337131,128335543,128333290,128330819,128324933,128324796,128324559,128323527,128321266,128317957,128317659,128314764,128313175,128310397	128343911,128339791,128339321,128338801,128338342,128337202,128336042,128333362,128330928,128325891,128324846,128324694,128323591,128321424,128318106,128317733,128315020,128313274,128310931	Gene ID= ENSG00000106344.8 TPM= 2.12 Transcript Type= NA
chr7	128297685	128343908	128297685	128343908	-	ENST00000223073.6@RBM28	ENST00000223073.6	protein_coding	128343676,128339633,128339227,128338726,128338250,128337131,128335847,128335543,128333290,128330819,128325818,128324559,128323527,128321266,128317957,128317659,128314764,128313175,128297685	128343908,128339791,128339321,128338801,128338342,128337202,128336042,128335679,128333362,128330928,128325891,128324694,128323591,128321424,128318106,128317733,128315020,128313274,128310931	Gene ID= ENSG00000106344.8 TPM= 52.05 Transcript Type= protein_coding
chr7	128310397	128343911	128310397	128343911	-	transcript4563.chr7.nic@RBM28	transcript4563.chr7.nic	protein_coding	128343676,128339633,128339227,128338726,128338250,128337131,128335847,128335543,128333290,128330819,128324559,128323527,128321266,128317957,128317659,128314764,128313175,128310397	128343911,128339791,128339321,128338801,128338342,128337202,128336042,128335679,128333362,128330928,128325891,128323591,128321424,128318106,128317733,128315020,128313274,128310931	Gene ID= ENSG00000106344.8 TPM= 6.37 Transcript Type= NA
chr7	128392278	128409982	128392278	128409982	-	ENST00000354269.9@IMPDH1	ENST00000354269.9	protein_coding	128409756,128409289,128405767,128403706,128401015,128400817,128400333,128400095,128398414,128396932,128396600,128395131,128394889,128394456,128394278,128392278	128409982,128409366,128405865,128403754,128401116,128400891,128400539,128400182,128398613,128397022,128396695,128395274,128395033,128394599,128394361,128393028	Gene ID= ENSG00000106348.16 TPM= 4.78 Transcript Type= protein_coding
chr7	128392301	128409990	128392301	128409990	-	transcript4577.chr7.nic@IMPDH1	transcript4577.chr7.nic	protein_coding	128409756,128409289,128405767,128403706,128401015,128400817,128400333,128400095,128398414,128396932,128396600,128395131,128394889,128394456,128394278,128392301	128409990,128409484,128405865,128403754,128401116,128400891,128400539,128400182,128398613,128397022,128396695,128395274,128395033,128394599,128394361,128393028	Gene ID= ENSG00000106348.16 TPM= 3.54 Transcript Type= NA
chr7	128392277	128405993	128392277	128405993	-	transcript4578.chr7.nic@IMPDH1	transcript4578.chr7.nic	protein_coding	128405767,128403706,128401015,128400817,128400333,128400095,128398414,128396932,128396600,128395131,128394889,128394456,128394278,128393722,128392277	128405993,128403754,128401116,128400891,128400539,128400182,128398613,128397022,128396695,128395274,128395033,128394599,128394361,128393738,128393028	Gene ID= ENSG00000106348.16 TPM= 4.43 Transcript Type= NA
chr7	128392278	128405948	128392278	128405948	-	ENST00000496200.5@IMPDH1	ENST00000496200.5	protein_coding	128405767,128403706,128401015,128400333,128400095,128398414,128396932,128396600,128395131,128394889,128394456,128394278,128392278	128405948,128403754,128401116,128400539,128400182,128398613,128397022,128396695,128395274,128395033,128394599,128394361,128393028	Gene ID= ENSG00000106348.16 TPM= 3.72 Transcript Type= protein_coding
chr7	128392301	128409982	128392301	128409982	-	ENST00000348127.10@IMPDH1	ENST00000348127.10	protein_coding	128409756,128405767,128403706,128401015,128400817,128400333,128400095,128398414,128396932,128396600,128395131,128394889,128394456,128394278,128392301	128409982,128405865,128403754,128401116,128400891,128400539,128400182,128398613,128397022,128396695,128395274,128395033,128394599,128394361,128393028	Gene ID= ENSG00000106348.16 TPM= 9.91 Transcript Type= protein_coding
chr7	128455903	128458418	128455903	128458418	+	ENST00000481454.1@HILPDA	ENST00000481454.1	protein_coding	128455903,128457847	128456700,128458418	Gene ID= ENSG00000135245.9 TPM= 2.12 Transcript Type= processed_transcript
chr7	128455849	128457924	128455849	128457924	+	ENST00000435296.2@HILPDA	ENST00000435296.2	protein_coding	128455849,128457201	128455909,128457924	Gene ID= ENSG00000135245.9 TPM= 2.12 Transcript Type= protein_coding
chr7	128455891	128458416	128455891	128458416	+	ENST00000257696.4@HILPDA	ENST00000257696.4	protein_coding	128455891,128457201	128456023,128458416	Gene ID= ENSG00000135245.9 TPM= 25.49 Transcript Type= protein_coding
chr7	128476729	128502924	128476729	128502924	+	ENST00000262432.12@METTL2B	ENST00000262432.12	protein_coding	128476729,128477082,128479158,128480647,128488101,128493804,128498036,128500903,128501762	128476875,128477173,128479513,128480696,128488161,128493943,128498142,128500968,128502924	Gene ID= ENSG00000165055.15 TPM= 20.18 Transcript Type= protein_coding
chr7	128653776	128655113	128653776	128655113	+	transcript4613.chr7.nnic@NA	transcript4613.chr7.nnic	NA	128653776	128655113	Gene ID= novel_gene_chr7_4614 TPM= 2.12 Transcript Type= NA
chr7	128662640	128663475	128662640	128663475	+	transcript4611.chr7.nnic@NA	transcript4611.chr7.nnic	NA	128662640	128663475	Gene ID= novel_gene_chr7_4612 TPM= 2.12 Transcript Type= NA
chr7	128739292	128771477	128739292	128771477	+	ENST00000542996.6@CALU	ENST00000542996.6	protein_coding	128739292,128747553,128748573,128754529,128758871,128759792,128767456,128769063	128739432,128748367,128748804,128754722,128759037,128759852,128767655,128771477	Gene ID= ENSG00000128595.16 TPM= 12.4 Transcript Type= protein_coding
chr7	128739342	128771474	128739342	128771474	+	ENST00000249364.8@CALU	ENST00000249364.8	protein_coding	128739342,128748573,128754262,128758871,128759792,128767456,128769063	128739432,128748804,128754455,128759037,128759852,128767655,128771474	Gene ID= ENSG00000128595.16 TPM= 230.14 Transcript Type= protein_coding
chr7	128739363	128770576	128739363	128770576	+	ENST00000449187.6@CALU	ENST00000449187.6	protein_coding	128739363,128748573,128754529,128758871,128759792,128767456,128769063	128739432,128748804,128754722,128759037,128759852,128767655,128770576	Gene ID= ENSG00000128595.16 TPM= 118.96 Transcript Type= protein_coding
chr7	128770926	128773407	128770926	128773407	+	transcript4642.chr7.nnic@NA	transcript4642.chr7.nnic	NA	128770926	128773407	Gene ID= novel_gene_chr7_4643 TPM= 14.87 Transcript Type= NA
chr7	128791438	128822125	128791438	128822125	+	transcript4644.chr7.nic@CCDC136	transcript4644.chr7.nic	protein_coding	128791438,128792320,128794348,128794694,128801186,128804650,128805359,128805761,128806237,128806688,128807360,128809450,128810139,128811800,128812708,128814638,128815614,128821799	128791551,128792427,128794602,128794768,128801509,128804761,128805524,128805901,128806395,128806858,128807545,128809644,128810366,128812312,128812929,128814919,128815931,128822125	Gene ID= ENSG00000128596.16 TPM= 3.19 Transcript Type= NA
chr7	128791438	128822125	128791438	128822125	+	transcript4645.chr7.nic@CCDC136	transcript4645.chr7.nic	protein_coding	128791438,128792320,128794348,128794694,128801186,128804650,128805359,128805761,128806237,128806688,128807360,128809450,128810139,128811800,128812708,128814638,128815795,128821799	128791551,128792427,128794602,128794768,128801509,128804761,128805524,128805901,128806395,128806858,128807545,128809644,128810366,128812312,128812929,128814919,128815931,128822125	Gene ID= ENSG00000128596.16 TPM= 3.19 Transcript Type= NA
chr7	128830377	128859272	128830377	128859272	+	ENST00000325888.12@FLNC	ENST00000325888.12	protein_coding	128830377,128835326,128837160,128837398,128837637,128837987,128838267,128838603,128840023,128840548,128840834,128841170,128841454,128842231,128842575,128842794,128843229,128843408,128843796,128844004,128844658,128845990,128846301,128846745,128847697,128847945,128848561,128848793,128849181,128849331,128849976,128850384,128850803,128851232,128851455,128852591,128852828,128853469,128853715,128853974,128854413,128854775,128855199,128856518,128856745,128857118,128858008,128858336	128830989,128835574,128837257,128837548,128837755,128838064,128838429,128838803,128840160,128840674,128840970,128841363,128841567,128842374,128842698,128842954,128843319,128843577,128843913,128844266,128845255,128846163,128846463,128846905,128847864,128848068,128848717,128848982,128849204,128849578,128850074,128850483,128850943,128851360,128851628,128852752,128853031,128853621,128853837,128854216,128854682,128854912,128855314,128856650,128856921,128857336,128858217,128859272	Gene ID= ENSG00000128591.15 TPM= 816 Transcript Type= protein_coding
chr7	128830426	128859274	128830426	128859274	+	ENST00000346177.6@FLNC	ENST00000346177.6	protein_coding	128830426,128835326,128837160,128837398,128837637,128837987,128838267,128838603,128840023,128840548,128840834,128841170,128841454,128842231,128842575,128842794,128843229,128843408,128843796,128844004,128844658,128845990,128846301,128846745,128847697,128847945,128848561,128848793,128849181,128849331,128850384,128850803,128851232,128851455,128852591,128852828,128853469,128853715,128853974,128854413,128854775,128855199,128856518,128856745,128857118,128858008,128858336	128830989,128835574,128837257,128837548,128837755,128838064,128838429,128838803,128840160,128840674,128840970,128841363,128841567,128842374,128842698,128842954,128843319,128843577,128843913,128844266,128845255,128846163,128846463,128846905,128847864,128848068,128848717,128848982,128849204,128849578,128850483,128850943,128851360,128851628,128852752,128853031,128853621,128853837,128854216,128854682,128854912,128855314,128856650,128856921,128857336,128858217,128859274	Gene ID= ENSG00000128591.15 TPM= 1242.99 Transcript Type= protein_coding
chr7	128861349	128862405	128861349	128862405	-	transcript4680.chr7.nnic@NA	transcript4680.chr7.nnic	NA	128861349	128862405	Gene ID= novel_gene_chr7_4681 TPM= 31.86 Transcript Type= NA
chr7	128862826	128865843	128862826	128865843	+	ENST00000249289.4@ATP6V1F	ENST00000249289.4	protein_coding	128862826,128865377	128863062,128865843	Gene ID= ENSG00000128524.4 TPM= 97.72 Transcript Type= protein_coding
chr7	128940672	128949388	128940672	128949388	+	ENST00000473745.5@IRF5	ENST00000473745.5	protein_coding	128940672,128942071,128945845,128946501,128947023,128947278,128947729,128948210,128948573	128940875,128942276,128946034,128946562,128947056,128947535,128948121,128948328,128949388	Gene ID= ENSG00000128604.19 TPM= 1.06 Transcript Type= protein_coding
chr7	128955088	129055126	128955088	129055126	-	transcript4689.chr7.nnic@TNPO3	transcript4689.chr7.nnic	protein_coding	129054651,129019871,129017957,129016983,129014979,129005016,129001059,129000429,128997389,128993807,128991999,128989961,128986729,128984168,128982248,128979971,128978983,128975819,128974868,128972426,128970148,128967280,128957224,128955088	129055126,129019995,129018157,129017056,129015135,129005159,129001234,129000567,128997535,128993914,128992090,128990100,128986920,128984259,128982324,128980031,128979123,128975935,128974962,128972582,128970315,128967392,128957315,128955385	Gene ID= ENSG00000064419.13 TPM= 6.37 Transcript Type= NA
chr7	129144691	129168833	129144691	129168833	+	transcript4693.chr7.nic@TSPAN33	transcript4693.chr7.nic	protein_coding	129144691,129161679,129162394,129162833,129164474,129166778,129167399	129145082,129161736,129162521,129162907,129164569,129166906,129168833	Gene ID= ENSG00000158457.5 TPM= 5.31 Transcript Type= NA
chr7	129144892	129168796	129144892	129168796	+	ENST00000486685.2@TSPAN33	ENST00000486685.2	protein_coding	129144892,129161679,129162394,129162833,129164474,129166778,129167399,129167773	129145082,129161736,129162521,129162907,129164569,129166906,129167560,129168796	Gene ID= ENSG00000158457.5 TPM= 4.25 Transcript Type= protein_coding
chr7	129225050	129430211	129225050	129430211	+	ENST00000446544.6@AHCYL2	ENST00000446544.6	protein_coding	129225050,129379641,129389056,129389634,129397222,129400290,129403379,129405097,129405836,129406378,129409476,129413594,129422840,129424874,129425063,129426443,129427039	129225439,129379749,129389199,129389734,129397324,129400384,129403485,129405213,129405899,129406466,129409546,129413688,129422938,129424942,129425141,129426563,129430211	Gene ID= ENSG00000158467.16 TPM= 4.25 Transcript Type= protein_coding
chr7	129434446	129483631	129434446	129483631	+	ENST00000435494.2@STRIP2	ENST00000435494.2	protein_coding	129434446,129440022,129444024,129451613,129453227,129454142,129454421,129455244,129456439,129458215,129458712,129459517,129460301,129462966,129464044,129464612,129467350,129470649,129480785,129482842	129434601,129440091,129444098,129451747,129453347,129454210,129454527,129455371,129456642,129458450,129458777,129459580,129460372,129463040,129464141,129464738,129467450,129470715,129480889,129483631	Gene ID= ENSG00000128578.9 TPM= 5.31 Transcript Type= protein_coding
chr7	129502479	129512932	129502479	129512932	+	ENST00000462322.2@SMKR1	ENST00000462322.2	protein_coding	129502479,129512247	129502827,129512932	Gene ID= ENSG00000240204.2 TPM= 1.06 Transcript Type= protein_coding
chr7	129611756	129756015	129611756	129756015	+	ENST00000223190.8@NRF1	ENST00000223190.8	protein_coding	129611756,129657343,129671429,129677632,129690406,129709075,129710374,129711475,129717219,129727241,129755018	129611824,129657574,129671543,129677758,129690546,129709233,129710571,129711576,129717376,129727365,129756015	Gene ID= ENSG00000106459.14 TPM= 5.31 Transcript Type= protein_coding
chr7	129613694	129616441	129613694	129616441	+	transcript4710.chr7.nnic@NA	transcript4710.chr7.nnic	NA	129613694	129616441	Gene ID= novel_gene_chr7_4711 TPM= 2.12 Transcript Type= NA
chr7	129833167	129952989	129833167	129952989	-	transcript4720.chr7.nic@UBE2H	transcript4720.chr7.nic	protein_coding	129952503,129880895,129879568,129858902,129857511,129839207,129833167	129952989,129880971,129879642,129858941,129857563,129839275,129835061	Gene ID= ENSG00000186591.11 TPM= 14.87 Transcript Type= NA
chr7	129830732	129952949	129830732	129952949	-	ENST00000355621.7@UBE2H	ENST00000355621.7	protein_coding	129952503,129880895,129879568,129858902,129857511,129839207,129830732	129952949,129880971,129879642,129858941,129857563,129839335,129835061	Gene ID= ENSG00000186591.11 TPM= 154.01 Transcript Type= protein_coding
chr7	129874765	129878703	129874765	129878703	+	transcript4735.chr7.nnic@NA	transcript4735.chr7.nnic	NA	129874765	129878703	Gene ID= novel_gene_chr7_4736 TPM= 18.06 Transcript Type= NA
chr7	129915181	129917052	129915181	129917052	+	transcript4737.chr7.nnic@NA	transcript4737.chr7.nnic	NA	129915181	129917052	Gene ID= novel_gene_chr7_4738 TPM= 2.12 Transcript Type= NA
chr7	129925668	129928045	129925668	129928045	+	transcript4739.chr7.nnic@NA	transcript4739.chr7.nnic	NA	129925668	129928045	Gene ID= novel_gene_chr7_4740 TPM= 9.56 Transcript Type= NA
chr7	129936914	129938439	129936914	129938439	+	transcript4741.chr7.nnic@NA	transcript4741.chr7.nnic	NA	129936914	129938439	Gene ID= novel_gene_chr7_4742 TPM= 28.68 Transcript Type= NA
chr7	129946221	129948262	129946221	129948262	-	transcript4743.chr7.nnic@NA	transcript4743.chr7.nnic	NA	129946221	129948262	Gene ID= novel_gene_chr7_4744 TPM= 2.12 Transcript Type= NA
chr7	130018286	130051451	130018286	130051451	-	ENST00000358303.8@ZC3HC1	ENST00000358303.8	protein_coding	130051221,130049033,130040951,130039464,130028902,130026158,130024263,130023511,130022319,130018286	130051451,130049144,130041101,130039547,130029029,130026312,130024506,130023723,130022525,130018732	Gene ID= ENSG00000091732.15 TPM= 94.53 Transcript Type= protein_coding
chr7	130018326	130051389	130018326	130051389	-	ENST00000481503.5@ZC3HC1	ENST00000481503.5	protein_coding	130051221,130049033,130040951,130039464,130028902,130026158,130024263,130023511,130022319,130018326	130051389,130049144,130041101,130039547,130029029,130026312,130024377,130023723,130022525,130018732	Gene ID= ENSG00000091732.15 TPM= 2.12 Transcript Type= protein_coding
chr7	130070547	130131125	130070547	130131125	+	transcript4755.chr7.nic@KLHDC10	transcript4755.chr7.nic	protein_coding	130070547,130116445,130120749,130122054,130124451,130125865,130127404,130129437,130130537	130070809,130116666,130120903,130122202,130124535,130125931,130127451,130129576,130131125	Gene ID= ENSG00000128607.13 TPM= 3.19 Transcript Type= NA
chr7	130164715	130205498	130164715	130205498	-	ENST00000397622.6@TMEM209	ENST00000397622.6	protein_coding	130205373,130203974,130203788,130202532,130201850,130192622,130185192,130184184,130181623,130178402,130175512,130173825,130173632,130170400,130164715	130205498,130204110,130203846,130202663,130202091,130192823,130185367,130184255,130181719,130178527,130175609,130173939,130173729,130170473,130166505	Gene ID= ENSG00000146842.16 TPM= 6.37 Transcript Type= protein_coding
chr7	130200312	130205449	130200312	130205449	-	transcript4761.chr7.nic@TMEM209	transcript4761.chr7.nic	protein_coding	130205373,130203974,130203788,130202532,130200312	130205449,130204110,130203846,130202663,130202091	Gene ID= ENSG00000146842.16 TPM= 5.31 Transcript Type= NA
chr7	130393771	130441237	130393771	130441237	-	ENST00000223208.9@CEP41	ENST00000223208.9	protein_coding	130440934,130427955,130416919,130412179,130411122,130404564,130402648,130401881,130400707,130400039,130393771	130441237,130428018,130416966,130412240,130411191,130404708,130402799,130401948,130400821,130400254,130399039	Gene ID= ENSG00000106477.18 TPM= 3.19 Transcript Type= protein_coding
chr7	130492093	130506292	130492093	130506292	+	ENST00000223215.8@MEST	ENST00000223215.8	protein_coding	130492093,130495368,130497156,130497936,130498139,130498419,130499875,130500462,130500789,130502644,130503933,130504939	130492339,130495522,130497235,130498013,130498275,130498477,130499915,130500532,130500890,130502720,130503996,130506292	Gene ID= ENSG00000106484.14 TPM= 4.25 Transcript Type= protein_coding
chr7	130506524	130668754	130506524	130668754	-	transcript4768.chr7.nic@COPG2	transcript4768.chr7.nic	protein_coding	130668632,130667482,130666849,130662967,130652869,130616990,130613544,130612152,130610953,130564260,130563269,130561033,130555037,130554481,130552355,130551241,130550524,130549314,130548403,130547674,130507685,130507274,130506524	130668754,130667534,130666929,130663038,130652948,130617065,130613636,130612238,130611110,130564393,130563336,130561221,130555132,130554724,130552430,130551344,130550649,130549376,130548542,130547845,130508659,130507372,130506806	Gene ID= ENSG00000158623.14 TPM= 2.12 Transcript Type= NA
chr7	130506238	130668748	130506238	130668748	-	ENST00000425248.5@COPG2	ENST00000425248.5	protein_coding	130668632,130667482,130666849,130662967,130652869,130616990,130613544,130612152,130610953,130564260,130563269,130561033,130555037,130554481,130552355,130551241,130550524,130549314,130548403,130547674,130508562,130507685,130507274,130506238	130668748,130667534,130666929,130663038,130652948,130617065,130613636,130612238,130611110,130564393,130563336,130561221,130555132,130554724,130552430,130551344,130550649,130549376,130548542,130547845,130508659,130507823,130507372,130506806	Gene ID= ENSG00000158623.14 TPM= 6.37 Transcript Type= protein_coding
chr7	130939916	130940473	130939916	130940473	+	transcript4783.chr7.nnic@NA	transcript4783.chr7.nnic	NA	130939916	130940473	Gene ID= novel_gene_chr7_4784 TPM= 3.19 Transcript Type= NA
chr7	130944162	131108143	130944162	131108143	-	transcript4777.chr7.nic@LINC-PINT	transcript4777.chr7.nic	antisense_RNA	131107720,131052425,130984053,130945720,130944162	131108143,131052555,130984109,130945835,130944889	Gene ID= ENSG00000231721.6 TPM= 27.62 Transcript Type= NA
chr7	131327860	131496636	131327860	131496636	+	ENST00000352689.10@MKLN1	ENST00000352689.10	protein_coding	131327860,131375424,131387120,131388884,131397267,131399241,131411306,131414645,131429033,131437785,131443481,131445774,131463217,131464294,131466276,131470842,131478623,131487607	131327997,131375493,131387262,131388972,131397376,131399433,131411383,131414710,131429145,131437997,131443702,131445903,131463364,131464408,131466415,131470944,131478677,131496636	Gene ID= ENSG00000128585.17 TPM= 22.31 Transcript Type= protein_coding
chr7	131327870	131376360	131327870	131376360	+	transcript4805.chr7.nic@MKLN1	transcript4805.chr7.nic	protein_coding	131327870,131375424	131327997,131376360	Gene ID= ENSG00000128585.17 TPM= 2.12 Transcript Type= NA
chr7	131327897	131487962	131327897	131487962	+	ENST00000458153.5@MKLN1	ENST00000458153.5	protein_coding	131327897,131375424,131387120,131388884,131397267,131399238,131411306,131414645,131429033,131437785,131443481,131445774,131463217,131464294,131466276,131470842,131478623,131487607	131327997,131375493,131387262,131388972,131397376,131399433,131411383,131414710,131429145,131437997,131443702,131445903,131463364,131464408,131466415,131470944,131478677,131487962	Gene ID= ENSG00000128585.17 TPM= 18.06 Transcript Type= nonsense_mediated_decay
chr7	131322558	131327760	131322558	131327760	-	transcript4803.chr7.nic@MKLN1-AS	transcript4803.chr7.nic	processed_transcript	131327615,131326806,131324303,131322558	131327760,131326935,131324425,131323868	Gene ID= ENSG00000236753.5 TPM= 3.19 Transcript Type= NA
chr7	131500262	131507100	131500262	131507100	-	transcript4809.chr7.nic@PODXL	transcript4809.chr7.nic	protein_coding	131506579,131506260,131505868,131500262	131507100,131506321,131506035,131504508	Gene ID= ENSG00000128567.16 TPM= 73.29 Transcript Type= NA
chr7	131505509	131507680	131505509	131507680	+	transcript4811.chr7.nnic@NA	transcript4811.chr7.nnic	NA	131505509	131507680	Gene ID= novel_gene_chr7_4812 TPM= 2.12 Transcript Type= NA
chr7	131549162	131551948	131549162	131551948	+	transcript4813.chr7.nnic@NA	transcript4813.chr7.nnic	NA	131549162	131551948	Gene ID= novel_gene_chr7_4814 TPM= 2.12 Transcript Type= NA
chr7	132256520	132259478	132256520	132259478	+	transcript4816.chr7.nnic@NA	transcript4816.chr7.nnic	NA	132256520	132259478	Gene ID= novel_gene_chr7_4817 TPM= 3.19 Transcript Type= NA
chr7	132780830	132781422	132780830	132781422	+	transcript4820.chr7.nnic@NA	transcript4820.chr7.nnic	NA	132780830	132781422	Gene ID= novel_gene_chr7_4821 TPM= 3.19 Transcript Type= NA
chr7	132784868	133082082	132784868	133082082	-	ENST00000262570.9@CHCHD3	ENST00000262570.9	protein_coding	133081857,133070142,133024546,132975169,132885662,132838399,132796442,132784868	133082082,133070229,133024627,132975286,132885745,132838469,132796577,132785660	Gene ID= ENSG00000106554.12 TPM= 359.01 Transcript Type= protein_coding
chr7	133060279	133061480	133060279	133061480	+	transcript4833.chr7.nnic@NA	transcript4833.chr7.nnic	NA	133060279	133061480	Gene ID= novel_gene_chr7_4834 TPM= 3.19 Transcript Type= NA
chr7	133080746	133082107	133080746	133082107	-	transcript4835.chr7.nnic@NA	transcript4835.chr7.nnic	NA	133080746	133082107	Gene ID= novel_gene_chr7_4836 TPM= 2.12 Transcript Type= NA
chr7	133253073	134065759	133253073	134065759	+	ENST00000253861.4@EXOC4	ENST00000253861.4	protein_coding	133253073,133274982,133288922,133305877,133317284,133356330,133374828,133475328,133480050,133630045,133817325,133895599,133917583,133937891,133997492,134004912,134007676,134064291	133253187,133275171,133289116,133306061,133317390,133356573,133375002,133475473,133480138,133630141,133817544,133895735,133917738,133938069,133997633,134005090,134007835,134065759	Gene ID= ENSG00000131558.14 TPM= 14.87 Transcript Type= protein_coding
chr7	133253073	133306713	133253073	133306713	+	transcript4844.chr7.nic@EXOC4	transcript4844.chr7.nic	protein_coding	133253073,133274982,133288922,133305877	133253187,133275171,133289116,133306713	Gene ID= ENSG00000131558.14 TPM= 2.12 Transcript Type= NA
chr7	133253095	133481078	133253095	133481078	+	ENST00000462055.5@EXOC4	ENST00000462055.5	protein_coding	133253095,133274982,133288922,133305877,133317284,133356330,133374828,133475328,133480050	133253187,133275171,133289116,133306061,133317390,133356573,133375002,133475473,133481078	Gene ID= ENSG00000131558.14 TPM= 3.19 Transcript Type= retained_intron
chr7	133478774	133479085	133478774	133479085	-	transcript4845.chr7.nnic@NA	transcript4845.chr7.nnic	NA	133478774	133479085	Gene ID= novel_gene_chr7_4846 TPM= 2.12 Transcript Type= NA
chr7	134289332	134317051	134289332	134317051	-	ENST00000378509.8@SLC35B4	ENST00000378509.8	protein_coding	134316675,134309366,134306672,134304805,134302029,134301761,134300152,134299523,134296391,134289332	134317051,134309479,134306774,134304854,134302110,134301821,134300261,134299598,134296466,134295079	Gene ID= ENSG00000205060.10 TPM= 2.12 Transcript Type= protein_coding
chr7	134442350	134459142	134442350	134459142	-	ENST00000285930.8@AKR1B1	ENST00000285930.8	protein_coding	134458997,134451586,134450786,134449720,134448997,134448387,134447980,134447298,134445238,134442350	134459142,134451753,134450902,134449797,134449119,134448493,134448061,134447381,134445320,134442770	Gene ID= ENSG00000085662.13 TPM= 319.18 Transcript Type= protein_coding
chr7	134442387	134459102	134442387	134459102	-	ENST00000465351.5@AKR1B1	ENST00000465351.5	protein_coding	134458997,134451586,134450786,134449720,134448997,134448387,134447298,134445238,134442387	134459102,134451753,134450902,134449797,134449119,134448493,134448061,134445320,134442770	Gene ID= ENSG00000085662.13 TPM= 3.19 Transcript Type= retained_intron
chr7	134442386	134459102	134442386	134459102	-	ENST00000434222.5@AKR1B1	ENST00000434222.5	protein_coding	134458997,134451586,134450786,134449720,134448997,134448387,134447461,134447298,134445238,134442386	134459102,134451753,134450902,134449797,134449119,134448493,134448061,134447381,134445320,134442770	Gene ID= ENSG00000085662.13 TPM= 1.06 Transcript Type= nonsense_mediated_decay
chr7	134527592	134541408	134527592	134541408	+	ENST00000359579.4@AKR1B10	ENST00000359579.4	protein_coding	134527592,134530643,134531908,134533004,134536650,134537051,134537580,134538194,134538935,134541047	134527977,134530810,134532024,134533081,134536772,134537157,134537661,134538277,134539017,134541408	Gene ID= ENSG00000198074.9 TPM= 1.06 Transcript Type= protein_coding
chr7	134644527	134646592	134644527	134646592	-	transcript4864.chr7.nnic@NA	transcript4864.chr7.nnic	NA	134644527	134646592	Gene ID= novel_gene_chr7_4865 TPM= 2.12 Transcript Type= NA
chr7	134646803	134663104	134646803	134663104	+	transcript4863.chr7.nic@BPGM	transcript4863.chr7.nic	protein_coding	134646803,134661447	134646937,134663104	Gene ID= ENSG00000172331.11 TPM= 3.19 Transcript Type= NA
chr7	134646808	134679813	134646808	134679813	+	ENST00000344924.7@BPGM	ENST00000344924.7	protein_coding	134646808,134661447,134678853	134646937,134662108,134679813	Gene ID= ENSG00000172331.11 TPM= 29.74 Transcript Type= protein_coding
chr7	134779459	134970641	134779459	134970641	+	transcript4870.chr7.nic@CALD1	transcript4870.chr7.nic	protein_coding	134779459,134843884,134867693,134928754,134932988,134935688,134941092,134947508,134950374,134958069,134958209,134959974,134960533,134962820,134965306,134968340	134779749,134843971,134867804,134928900,134934077,134935765,134941237,134947769,134950514,134958112,134958290,134960111,134960628,134962934,134965386,134970641	Gene ID= ENSG00000122786.19 TPM= 24.43 Transcript Type= NA
chr7	134891400	134970641	134891400	134970641	+	transcript4883.chr7.nic@CALD1	transcript4883.chr7.nic	protein_coding	134891400,134928754,134932988,134935688,134941092,134947508,134950374,134958069,134958209,134959974,134960533,134962820,134965306,134968340	134891673,134928900,134934077,134935765,134941237,134947769,134950514,134958112,134958290,134960111,134960628,134962934,134965386,134970641	Gene ID= ENSG00000122786.19 TPM= 28.68 Transcript Type= NA
chr7	134891400	134970728	134891400	134970728	+	ENST00000393118.6@CALD1	ENST00000393118.6	protein_coding	134891400,134928754,134932988,134935688,134941092,134947508,134950374,134958069,134958209,134959974,134960533,134965306,134968340	134891673,134928900,134933390,134935765,134941237,134947769,134950514,134958112,134958290,134960111,134960628,134965386,134970728	Gene ID= ENSG00000122786.19 TPM= 1.59 Transcript Type= protein_coding
chr7	134779678	134970641	134779678	134970641	+	ENST00000361901.6@CALD1	ENST00000361901.6	protein_coding	134779678,134843884,134867693,134928754,134932988,134941092,134947508,134950374,134958069,134958209,134959974,134960533,134965306,134968340	134779749,134843971,134867804,134928900,134933390,134941237,134947769,134950514,134958112,134958290,134960111,134960628,134965386,134970641	Gene ID= ENSG00000122786.19 TPM= 17.53 Transcript Type= protein_coding
chr7	134891458	134970641	134891458	134970641	+	ENST00000443197.5@CALD1	ENST00000443197.5	protein_coding	134891458,134928754,134932988,134941092,134947508,134950374,134958069,134958209,134959974,134960533,134962820,134965306,134968340	134891673,134928900,134933390,134941237,134947769,134950514,134958112,134958290,134960111,134960628,134962934,134965386,134970641	Gene ID= ENSG00000122786.19 TPM= 4.25 Transcript Type= nonsense_mediated_decay
chr7	134792288	134795807	134792288	134795807	-	transcript4935.chr7.nnic@NA	transcript4935.chr7.nnic	NA	134792288	134795807	Gene ID= novel_gene_chr7_4936 TPM= 25.49 Transcript Type= NA
chr7	134817256	134826324	134817256	134826324	-	transcript4929.chr7.nnic@NA	transcript4929.chr7.nnic	NA	134826276,134817256	134826324,134818839	Gene ID= novel_gene_chr7_4930 TPM= 4.25 Transcript Type= NA
chr7	134826137	134826322	134826137	134826322	-	transcript4941.chr7.nnic@NA	transcript4941.chr7.nnic	NA	134826137	134826322	Gene ID= novel_gene_chr7_4942 TPM= 3.19 Transcript Type= NA
chr7	134891712	134893289	134891712	134893289	-	transcript4937.chr7.nnic@NA	transcript4937.chr7.nnic	NA	134891712	134893289	Gene ID= novel_gene_chr7_4938 TPM= 5.31 Transcript Type= NA
chr7	134944400	134946488	134944400	134946488	-	transcript4939.chr7.nnic@NA	transcript4939.chr7.nnic	NA	134944400	134946488	Gene ID= novel_gene_chr7_4940 TPM= 4.25 Transcript Type= NA
chr7	134986511	134989685	134986511	134989685	+	transcript4944.chr7.nnic@NA	transcript4944.chr7.nnic	NA	134986511	134989685	Gene ID= novel_gene_chr7_4945 TPM= 4.25 Transcript Type= NA
chr7	135165780	135170732	135165780	135170732	-	transcript4948.chr7.nnic@C7orf49	transcript4948.chr7.nnic	protein_coding	135170399,135168749,135167732,135167282,135165780	135170732,135169060,135167807,135167408,135166871	Gene ID= ENSG00000122783.16 TPM= 2.34 Transcript Type= NA
chr7	135165782	135170524	135165782	135170524	-	ENST00000617987.1@C7orf49	ENST00000617987.1	protein_coding	135170276,135168749,135167732,135165782	135170524,135169060,135167807,135166871	Gene ID= ENSG00000122783.16 TPM= 2.6 Transcript Type= protein_coding
chr7	135165785	135170788	135165785	135170788	-	transcript4954.chr7.nic@C7orf49	transcript4954.chr7.nic	protein_coding	135170652,135168749,135167732,135165785	135170788,135169060,135167807,135166871	Gene ID= ENSG00000122783.16 TPM= 7.91 Transcript Type= NA
chr7	135165785	135170676	135165785	135170676	-	transcript4955.chr7.nic@C7orf49	transcript4955.chr7.nic	protein_coding	135170399,135168786,135167732,135165785	135170676,135169060,135167807,135166871	Gene ID= ENSG00000122783.16 TPM= 2.6 Transcript Type= NA
chr7	135165829	135170795	135165829	135170795	-	ENST00000430372.1@C7orf49	ENST00000430372.1	protein_coding	135170652,135168745,135167732,135165829	135170795,135169060,135167807,135166871	Gene ID= ENSG00000122783.16 TPM= 2.12 Transcript Type= protein_coding
chr7	135165785	135170661	135165785	135170661	-	ENST00000424142.5@C7orf49	ENST00000424142.5	protein_coding	135170399,135168749,135167732,135165785	135170661,135169060,135167807,135166871	Gene ID= ENSG00000122783.16 TPM= 8.98 Transcript Type= protein_coding
chr7	135148072	135166215	135148072	135166215	+	ENST00000275767.3@TMEM140	ENST00000275767.3	protein_coding	135148072,135164418	135148270,135166215	Gene ID= ENSG00000146859.6 TPM= 2.12 Transcript Type= protein_coding
chr7	135159791	135164338	135159791	135164338	-	transcript4967.chr7.nnic@NA	transcript4967.chr7.nnic	NA	135159791	135164338	Gene ID= novel_gene_chr7_4968 TPM= 2.12 Transcript Type= NA
chr7	135183839	135211534	135183839	135211534	-	ENST00000354475.4@WDR91	ENST00000354475.4	protein_coding	135211380,135209576,135208791,135207120,135205928,135204268,135197993,135196144,135194934,135193578,135193231,135189344,135188433,135186972,135183839	135211534,135209755,135208998,135207202,135206058,135204433,135198151,135196337,135195084,135193672,135193399,135189452,135188545,135187169,135186315	Gene ID= ENSG00000105875.13 TPM= 3.19 Transcript Type= protein_coding
chr7	135361795	135510127	135361795	135510127	-	ENST00000541284.5@CNOT4	ENST00000541284.5	protein_coding	135509889,135438158,135422156,135415176,135414331,135413488,135410515,135398169,135395634,135393918,135363854,135361795	135510127,135438423,135422353,135415262,135414432,135413613,135410648,135398226,135395883,135394415,135364066,135363186	Gene ID= ENSG00000080802.18 TPM= 3.72 Transcript Type= protein_coding
chr7	135408910	135510106	135408910	135510106	-	transcript4978.chr7.nic@CNOT4	transcript4978.chr7.nic	protein_coding	135509889,135438158,135422156,135415176,135414331,135413488,135408910	135510106,135438423,135422353,135415262,135414432,135413613,135410648	Gene ID= ENSG00000080802.18 TPM= 2.12 Transcript Type= NA
chr7	135361798	135510077	135361798	135510077	-	ENST00000423368.6@CNOT4	ENST00000423368.6	protein_coding	135509889,135438158,135422156,135415176,135414331,135413488,135410515,135398169,135395634,135393918,135361798	135510077,135438423,135422353,135415262,135414432,135413613,135410648,135398226,135395883,135394415,135363186	Gene ID= ENSG00000080802.18 TPM= 2.66 Transcript Type= protein_coding
chr7	135378966	135382593	135378966	135382593	+	transcript4982.chr7.nnic@NA	transcript4982.chr7.nnic	NA	135378966	135382593	Gene ID= novel_gene_chr7_4983 TPM= 2.12 Transcript Type= NA
chr7	135557919	135648757	135557919	135648757	+	ENST00000285968.10@NUP205	ENST00000285968.10	protein_coding	135557919,135571105,135573654,135576270,135576969,135577796,135578751,135584832,135587575,135587855,135591450,135592987,135594547,135597368,135597998,135600870,135601370,135602805,135604340,135606145,135606751,135607247,135614159,135615916,135616655,135617090,135617602,135618412,135619423,135619790,135622777,135625164,135626240,135627973,135630344,135635581,135637931,135638557,135643192,135644895,135645468,135646158,135648404	135557972,135571247,135573825,135576414,135577128,135578024,135578915,135585007,135587691,135587992,135591600,135593192,135594729,135597418,135598207,135600969,135601507,135602994,135604460,135606226,135606915,135607371,135614273,135616065,135616726,135617247,135617682,135618603,135619690,135619888,135622925,135625355,135626361,135628111,135630470,135635657,135638059,135638683,135643358,135645018,135645596,135646231,135648757	Gene ID= ENSG00000155561.14 TPM= 5.31 Transcript Type= protein_coding
chr7	135662521	135676412	135662521	135676412	+	ENST00000507606.2@C7orf73	ENST00000507606.2	protein_coding	135662521,135672753,135674091	135662594,135672806,135676412	Gene ID= ENSG00000243317.7 TPM= 4.25 Transcript Type= protein_coding
chr7	135662506	135662920	135662506	135662920	+	transcript4999.chr7.nnic@NA	transcript4999.chr7.nnic	NA	135662506	135662920	Gene ID= novel_gene_chr7_5000 TPM= 2.12 Transcript Type= NA
chr7	135681237	135728186	135681237	135728186	-	ENST00000354042.8@SLC13A4	ENST00000354042.8	protein_coding	135727398,135721395,135708114,135706128,135705596,135702845,135701680,135699364,135695368,135694137,135692323,135691548,135691201,135685522,135684124,135681237	135728186,135721523,135708250,135706300,135705650,135702881,135701760,135699548,135695487,135694238,135692424,135691645,135691325,135685683,135684261,135681700	Gene ID= ENSG00000164707.15 TPM= 1.06 Transcript Type= protein_coding
chr7	135696358	135697457	135696358	135697457	-	transcript5001.chr7.nnic@NA	transcript5001.chr7.nnic	NA	135696358	135697457	Gene ID= novel_gene_chr7_5002 TPM= 2.12 Transcript Type= NA
chr7	135729592	135734080	135729592	135734080	-	transcript5009.chr7.nnic@NA	transcript5009.chr7.nnic	NA	135729592	135734080	Gene ID= novel_gene_chr7_5010 TPM= 15.93 Transcript Type= NA
chr7	135729601	135730523	135729601	135730523	+	transcript5007.chr7.nnic@NA	transcript5007.chr7.nnic	NA	135729601	135730523	Gene ID= novel_gene_chr7_5008 TPM= 3.19 Transcript Type= NA
chr7	136087023	136087207	136087023	136087207	+	transcript5012.chr7.nnic@NA	transcript5012.chr7.nnic	NA	136087023	136087207	Gene ID= novel_gene_chr7_5013 TPM= 2.12 Transcript Type= NA
chr7	136868622	137004038	136868622	137004038	+	transcript5014.chr7.nnic@CHRM2	transcript5014.chr7.nnic	protein_coding	136868622,136869261,136992184,137001863	136868992,136869415,136992264,137004038	Gene ID= ENSG00000181072.11 TPM= 2.12 Transcript Type= NA
chr7	136869085	136871963	136869085	136871963	+	ENST00000480591.5@CHRM2	ENST00000480591.5	protein_coding	136869085,136869261,136869805	136869173,136869418,136871963	Gene ID= ENSG00000181072.11 TPM= 3.19 Transcript Type= processed_transcript
chr7	136868669	137020255	136868669	137020255	+	ENST00000445907.6@CHRM2	ENST00000445907.6	protein_coding	136868669,136869261,137014820	136868992,136869418,137020255	Gene ID= ENSG00000181072.11 TPM= 14.87 Transcript Type= protein_coding
chr7	136874357	136874546	136874357	136874546	-	transcript5027.chr7.nnic@NA	transcript5027.chr7.nnic	NA	136874357	136874546	Gene ID= novel_gene_chr7_5028 TPM= 2.12 Transcript Type= NA
chr7	136880048	136882399	136880048	136882399	-	transcript5023.chr7.nnic@NA	transcript5023.chr7.nnic	NA	136880048	136882399	Gene ID= novel_gene_chr7_5024 TPM= 9.56 Transcript Type= NA
chr7	136892673	136894976	136892673	136894976	-	transcript5025.chr7.nnic@NA	transcript5025.chr7.nnic	NA	136892673	136894976	Gene ID= novel_gene_chr7_5026 TPM= 4.25 Transcript Type= NA
chr7	137227341	137343865	137227341	137343865	-	ENST00000348225.6@PTN	ENST00000348225.6	protein_coding	137343439,137254859,137253464,137251230,137227341	137343865,137254974,137253637,137251391,137228075	Gene ID= ENSG00000105894.11 TPM= 6.37 Transcript Type= protein_coding
chr7	137389610	137454953	137389610	137454953	-	transcript5033.chr7.nic@DGKI	transcript5033.chr7.nic	protein_coding	137454754,137444077,137412170,137407875,137397377,137395598,137389610	137454953,137444102,137412207,137407995,137397413,137395697,137391336	Gene ID= ENSG00000157680.15 TPM= 2.12 Transcript Type= NA
chr7	137912811	138002047	137912811	138002047	-	ENST00000452463.5@CREB3L2	ENST00000452463.5	protein_coding	138001604,137928150,137915837,137912811	138002047,137928366,137916012,137913078	Gene ID= ENSG00000182158.14 TPM= 2.12 Transcript Type= protein_coding
chr7	137892447	137895651	137892447	137895651	+	transcript5036.chr7.nnic@NA	transcript5036.chr7.nnic	NA	137892447	137895651	Gene ID= novel_gene_chr7_5037 TPM= 2.12 Transcript Type= NA
chr7	139023111	139025461	139023111	139025461	+	transcript5042.chr7.nnic@NA	transcript5042.chr7.nnic	NA	139023111	139025461	Gene ID= novel_gene_chr7_5043 TPM= 9.56 Transcript Type= NA
chr7	139043520	139109648	139043520	139109648	-	ENST00000242351.9@ZC3HAV1	ENST00000242351.9	protein_coding	139109024,139089624,139083780,139079470,139078552,139076286,139073856,139064879,139061036,139055205,139053965,139053451,139043520	139109648,139089759,139084032,139080243,139078653,139076409,139074030,139064999,139061138,139055295,139054095,139053581,139047853	Gene ID= ENSG00000105939.12 TPM= 4.25 Transcript Type= protein_coding
chr7	139293627	139301994	139293627	139301994	+	ENST00000609762.1@UBN2	ENST00000609762.1	protein_coding	139293627,139297787	139293981,139301994	Gene ID= ENSG00000157741.14 TPM= 1.06 Transcript Type= retained_intron
chr7	139341132	139346319	139341132	139346319	+	ENST00000297534.6@FMC1	ENST00000297534.6	protein_coding	139341132,139345501	139341522,139346319	Gene ID= ENSG00000164898.12 TPM= 71.16 Transcript Type= protein_coding
chr7	139359894	139419831	139359894	139419831	+	transcript5071.chr7.nic@LUC7L2	transcript5071.chr7.nic	protein_coding	139359894,139376062,139398599,139402137,139405644,139407174,139409563,139412551,139417538	139360322,139376156,139398697,139402247,139405787,139407350,139409654,139412580,139419831	Gene ID= ENSG00000146963.17 TPM= 11.15 Transcript Type= NA
chr7	139359908	139423452	139359908	139423452	+	ENST00000354926.8@LUC7L2	ENST00000354926.8	protein_coding	139359908,139376062,139398599,139402137,139405644,139407174,139409563,139412551,139417538,139422163	139360322,139376156,139398697,139402247,139405787,139407350,139409654,139412580,139417729,139423452	Gene ID= ENSG00000146963.17 TPM= 33.46 Transcript Type= protein_coding
chr7	139596717	139778034	139596717	139778034	-	transcript5083.chr7.nic@HIPK2	transcript5083.chr7.nic	protein_coding	139777605,139715932,139631602,139631165,139628953,139626601,139620401,139614286,139613202,139604081,139600417,139596717	139778034,139717015,139631725,139631284,139629039,139626785,139620563,139614412,139613323,139604223,139600596,139596998	Gene ID= ENSG00000064393.15 TPM= 11.42 Transcript Type= NA
chr7	139626108	139778034	139626108	139778034	-	transcript5084.chr7.nic@HIPK2	transcript5084.chr7.nic	protein_coding	139777605,139715932,139631602,139631165,139628953,139626108	139778034,139717015,139631725,139631284,139629039,139626785	Gene ID= ENSG00000064393.15 TPM= 7.17 Transcript Type= NA
chr7	139561570	139777718	139561570	139777718	-	ENST00000406875.7@HIPK2	ENST00000406875.7	protein_coding	139777605,139715932,139631602,139631165,139628953,139626601,139620401,139614286,139613202,139604081,139600417,139596717,139583817,139575128,139561570	139777718,139717015,139631725,139631284,139629039,139626785,139620563,139614493,139613323,139604223,139600596,139596998,139584064,139575288,139573397	Gene ID= ENSG00000064393.15 TPM= 510.1 Transcript Type= protein_coding
chr7	139572629	139777778	139572629	139777778	-	ENST00000428878.6@HIPK2	ENST00000428878.6	protein_coding	139777605,139715932,139631602,139631165,139628953,139626601,139620401,139614286,139613202,139604081,139600417,139596717,139583817,139575128,139572629	139777778,139717015,139631725,139631284,139629039,139626785,139620563,139614412,139613323,139604223,139600596,139596998,139584064,139575288,139573397	Gene ID= ENSG00000064393.15 TPM= 58.68 Transcript Type= protein_coding
chr7	140023744	140063721	140023744	140063721	-	ENST00000263549.7@PARP12	ENST00000263549.7	protein_coding	140062522,140057899,140056856,140054662,140046884,140041644,140037715,140034235,140028613,140027276,140026197,140023744	140063721,140058034,140057153,140054763,140047007,140041839,140037856,140034331,140028688,140027406,140026348,140024885	Gene ID= ENSG00000059378.12 TPM= 10.62 Transcript Type= protein_coding
chr7	140177261	140179640	140177261	140179640	+	ENST00000566699.1@JHDM1D-AS1	ENST00000566699.1	antisense_RNA	140177261	140179640	Gene ID= ENSG00000260231.1 TPM= 23.37 Transcript Type= antisense_RNA
chr7	140333752	140398532	140333752	140398532	-	transcript5103.chr7.nic@SLC37A3	transcript5103.chr7.nic	protein_coding	140398416,140382438,140380282,140379214,140369590,140364408,140358640,140355668,140352062,140351273,140348626,140345869,140345216,140343412,140337284,140333752	140398532,140382596,140380390,140379307,140369682,140364491,140358785,140355764,140352146,140351451,140348767,140345970,140345263,140343563,140337349,140335504	Gene ID= ENSG00000157800.17 TPM= 2.12 Transcript Type= NA
chr7	140333752	140398549	140333752	140398549	-	ENST00000326232.13@SLC37A3	ENST00000326232.13	protein_coding	140398416,140382438,140380282,140369590,140364408,140358640,140355668,140352062,140351273,140348626,140345869,140345216,140343412,140337284,140333752	140398549,140382596,140380390,140369682,140364491,140358785,140355764,140352146,140351451,140348767,140345970,140345263,140343563,140337349,140335504	Gene ID= ENSG00000157800.17 TPM= 14.87 Transcript Type= protein_coding
chr7	140333752	140398532	140333752	140398532	-	transcript5109.chr7.nic@SLC37A3	transcript5109.chr7.nic	protein_coding	140398416,140382438,140380282,140369590,140364408,140358640,140355668,140348626,140345869,140345216,140343412,140337284,140333752	140398532,140382596,140380390,140369682,140364491,140358785,140355764,140348767,140345970,140345263,140343563,140337349,140335504	Gene ID= ENSG00000157800.17 TPM= 2.12 Transcript Type= NA
chr7	140453040	140479569	140453040	140479569	-	ENST00000255977.6@MKRN1	ENST00000255977.6	protein_coding	140479160,140471883,140459707,140459007,140456652,140455790,140455095,140453040	140479569,140472011,140459936,140459233,140456866,140455900,140455233,140454729	Gene ID= ENSG00000133606.10 TPM= 216.33 Transcript Type= protein_coding
chr7	140453047	140479545	140453047	140479545	-	transcript5123.chr7.nic@MKRN1	transcript5123.chr7.nic	protein_coding	140479160,140471883,140459707,140459007,140456652,140455857,140455095,140453047	140479545,140472011,140459936,140459233,140456866,140455900,140455233,140454729	Gene ID= ENSG00000133606.10 TPM= 16.11 Transcript Type= NA
chr7	140453047	140479382	140453047	140479382	-	transcript5124.chr7.nnic@MKRN1	transcript5124.chr7.nnic	protein_coding	140479160,140459707,140459007,140456652,140455790,140455095,140453047	140479382,140459936,140459233,140456866,140455900,140455233,140454729	Gene ID= ENSG00000133606.10 TPM= 10.44 Transcript Type= NA
chr7	140456192	140479499	140456192	140479499	-	ENST00000443720.6@MKRN1	ENST00000443720.6	protein_coding	140479160,140471883,140459707,140459007,140456192	140479499,140472011,140459936,140459233,140456866	Gene ID= ENSG00000133606.10 TPM= 83.2 Transcript Type= protein_coding
chr7	140518430	140640810	140518430	140640810	-	transcript5132.chr7.nnic@DENND2A	transcript5132.chr7.nnic	protein_coding	140640504,140608356,140601403,140587653,140585589,140573808,140569645,140568763,140567086,140559708,140558143,140555636,140546799,140544618,140527318,140525751,140523307,140521855,140519632,140518430	140640810,140608509,140602542,140587780,140585710,140574008,140569738,140568813,140567273,140559817,140558212,140555713,140546939,140544766,140527495,140525792,140523424,140522100,140519718,140518738	Gene ID= ENSG00000146966.12 TPM= 3.19 Transcript Type= NA
chr7	140672907	140695121	140672907	140695121	+	transcript5136.chr7.nnic@ADCK2	transcript5136.chr7.nnic	protein_coding	140672907,140674611,140679155,140686990,140689597,140690760,140694663	140674263,140674757,140679283,140687241,140689725,140690813,140695121	Gene ID= ENSG00000133597.10 TPM= 2.12 Transcript Type= NA
chr7	140673153	140695121	140673153	140695121	+	ENST00000072869.8@ADCK2	ENST00000072869.8	protein_coding	140673153,140674611,140679155,140681042,140686990,140689597,140690760,140694663	140674263,140674757,140679283,140681137,140687241,140689725,140690813,140695121	Gene ID= ENSG00000133597.10 TPM= 18.06 Transcript Type= protein_coding
chr7	140696672	140706646	140696672	140706646	+	ENST00000247866.8@NDUFB2	ENST00000247866.8	protein_coding	140696672,140702866,140704860,140706563	140696842,140703010,140704963,140706646	Gene ID= ENSG00000090266.12 TPM= 692 Transcript Type= protein_coding
chr7	140697224	140706644	140697224	140706644	+	ENST00000471136.5@NDUFB2	ENST00000471136.5	protein_coding	140697224,140702866,140704860,140706563	140697391,140703010,140704963,140706644	Gene ID= ENSG00000090266.12 TPM= 1.59 Transcript Type= protein_coding
chr7	140696748	140706500	140696748	140706500	+	ENST00000464566.5@NDUFB2	ENST00000464566.5	protein_coding	140696748,140702866,140704860,140706119	140696842,140703010,140704963,140706500	Gene ID= ENSG00000090266.12 TPM= 1.06 Transcript Type= protein_coding
chr7	140725146	140924912	140725146	140924912	-	transcript5141.chr7.nic@BRAF	transcript5141.chr7.nic	protein_coding	140924566,140850111,140834609,140808892,140807960,140801412,140800362,140794308,140787548,140783021,140781576,140777991,140776912,140754187,140753275,140749287,140739812,140734617,140725146	140924912,140850212,140834872,140808995,140808062,140801560,140800481,140794467,140787584,140783157,140781693,140778075,140777088,140754233,140753393,140749418,140739946,140734770,140726516	Gene ID= ENSG00000157764.12 TPM= 8.5 Transcript Type= NA
chr7	140829345	140833566	140829345	140833566	-	transcript5157.chr7.nnic@NA	transcript5157.chr7.nnic	NA	140829345	140833566	Gene ID= novel_gene_chr7_5158 TPM= 2.12 Transcript Type= NA
chr7	141006169	141014966	141006169	141014966	-	ENST00000467334.1@MRPS33	ENST00000467334.1	protein_coding	141014911,141010419,141006169	141014966,141010617,141006535	Gene ID= ENSG00000090263.15 TPM= 24.43 Transcript Type= protein_coding
chr7	141006054	141014679	141006054	141014679	-	ENST00000393008.7@MRPS33	ENST00000393008.7	protein_coding	141014551,141010419,141006054	141014679,141010660,141006535	Gene ID= ENSG00000090263.15 TPM= 1.59 Transcript Type= protein_coding
chr7	141006168	141014955	141006168	141014955	-	transcript5163.chr7.nnic@MRPS33	transcript5163.chr7.nnic	protein_coding	141014911,141006168	141014955,141006535	Gene ID= ENSG00000090263.15 TPM= 6.37 Transcript Type= NA
chr7	141002610	141014983	141002610	141014983	-	ENST00000324787.9@MRPS33	ENST00000324787.9	protein_coding	141014911,141010419,141002610	141014983,141010660,141006535	Gene ID= ENSG00000090263.15 TPM= 2.66 Transcript Type= protein_coding
chr7	141394022	141396608	141394022	141396608	-	transcript5169.chr7.nnic@NA	transcript5169.chr7.nnic	NA	141394022	141396608	Gene ID= novel_gene_chr7_5170 TPM= 2.12 Transcript Type= NA
chr7	141551430	141654409	141551430	141654409	+	transcript5179.chr7.nnic@AGK	transcript5179.chr7.nnic	protein_coding	141551430,141555453,141593146,141596562,141601205,141611195,141614146,141615471,141621732,141633901,141636960,141641248,141641811,141649263,141651525,141652787	141551499,141555567,141593185,141596641,141601280,141611287,141614178,141615565,141621801,141633980,141637017,141641398,141641908,141649333,141651609,141654409	Gene ID= ENSG00000006530.15 TPM= 6.37 Transcript Type= NA
chr7	141660842	141702180	141660842	141702180	-	transcript5186.chr7.nic@KIAA1147	transcript5186.chr7.nic	protein_coding	141701886,141686559,141685478,141674067,141666287,141665187,141664904,141660842	141702180,141686658,141685636,141674220,141666425,141665318,141665054,141664240	Gene ID= ENSG00000257093.6 TPM= 2.12 Transcript Type= NA
chr7	141738321	141750461	141738321	141750461	+	ENST00000265304.10@SSBP1	ENST00000265304.10	protein_coding	141738321,141739124,141742169,141743561,141743902,141745496,141750311	141738410,141739190,141742229,141743701,141743989,141745584,141750461	Gene ID= ENSG00000106028.10 TPM= 66.39 Transcript Type= protein_coding
chr7	141738334	141750488	141738334	141750488	+	ENST00000612337.4@SSBP1	ENST00000612337.4	protein_coding	141738334,141739124,141742169,141743561,141743902,141745496,141750311	141738593,141739190,141742229,141743701,141743989,141745584,141750488	Gene ID= ENSG00000106028.10 TPM= 7.97 Transcript Type= protein_coding
chr7	142855061	142871094	142855061	142871094	+	ENST00000619012.4@EPHB6	ENST00000619012.4	protein_coding	142855061,142861052,142862017,142862756,142863131,142863631,142863966,142865475,142865960,142866481,142866906,142867608,142867997,142868241,142868492,142868974,142869817,142870214,142870530,142870796	142855385,142861186,142862133,142862833,142863327,142863695,142864749,142865630,142866316,142866605,142867068,142867722,142868049,142868360,142868739,142869147,142869966,142870407,142870685,142871094	Gene ID= ENSG00000106123.11 TPM= 3.19 Transcript Type= protein_coding
chr7	143263443	143269129	143263443	143269129	+	ENST00000358406.9@GSTK1	ENST00000358406.9	protein_coding	143263443,143264086,143264548,143264992,143265261,143267617,143268091,143268788	143263585,143264167,143264676,143265092,143265296,143267733,143268184,143269129	Gene ID= ENSG00000197448.13 TPM= 179.15 Transcript Type= protein_coding
chr7	143263456	143269115	143263456	143269115	+	ENST00000479303.1@GSTK1	ENST00000479303.1	protein_coding	143263456,143264086,143264548,143264992,143267617,143268091,143268788	143263585,143264167,143264676,143265296,143267733,143268184,143269115	Gene ID= ENSG00000197448.13 TPM= 23.02 Transcript Type= protein_coding
chr7	143269031	143272491	143269031	143272491	+	transcript5219.chr7.nnic@NA	transcript5219.chr7.nnic	NA	143269031	143272491	Gene ID= novel_gene_chr7_5220 TPM= 9.56 Transcript Type= NA
chr7	143285266	143287296	143285266	143287296	+	transcript5217.chr7.nic@TMEM139	transcript5217.chr7.nic	protein_coding	143285266,143286424	143286202,143287296	Gene ID= ENSG00000178826.10 TPM= 2.12 Transcript Type= NA
chr7	143288215	143307696	143288215	143307696	+	ENST00000310447.9@CASP2	ENST00000310447.9	protein_coding	143288215,143291540,143292300,143292617,143294230,143294597,143299923,143300204,143303784,143304674,143304940	143288529,143291690,143292467,143292698,143294324,143294773,143300051,143300294,143303933,143304783,143307696	Gene ID= ENSG00000106144.19 TPM= 22.31 Transcript Type= protein_coding
chr7	143379691	143380975	143379691	143380975	-	transcript5233.chr7.nnic@NA	transcript5233.chr7.nnic	NA	143379691	143380975	Gene ID= novel_gene_chr7_5234 TPM= 14.87 Transcript Type= NA
chr7	143381315	143391111	143381315	143391111	+	transcript5228.chr7.nic@ZYX	transcript5228.chr7.nic	protein_coding	143381315,143381557,143382248,143382801,143388219,143388489,143388767,143389857,143390578	143381409,143381779,143382447,143383322,143388339,143388658,143388945,143389977,143391111	Gene ID= ENSG00000159840.15 TPM= 35.58 Transcript Type= NA
chr7	143381080	143391111	143381080	143391111	+	ENST00000322764.9@ZYX	ENST00000322764.9	protein_coding	143381080,143381557,143382248,143382593,143382801,143388219,143388489,143388767,143389857,143390578	143381409,143381779,143382447,143382685,143383322,143388339,143388658,143388945,143389977,143391111	Gene ID= ENSG00000159840.15 TPM= 180.04 Transcript Type= protein_coding
chr7	143811968	143836933	143811968	143836933	-	ENST00000481651.1@AC099548.2	ENST00000481651.1	transcribed_unprocessed_pseudogene	143836640,143811968	143836933,143813779	Gene ID= ENSG00000253882.6 TPM= 1.06 Transcript Type= processed_transcript
chr7	143852872	143882840	143852872	143882840	-	transcript5236.chr7.nic@TCAF1	transcript5236.chr7.nic	protein_coding	143882736,143875989,143862802,143862416,143861095,143860208,143858824,143857100,143852872	143882840,143876622,143863796,143862513,143861308,143860447,143859161,143857350,143854142	Gene ID= ENSG00000198420.9 TPM= 4.6 Transcript Type= NA
chr7	143852967	143902182	143852967	143902182	-	transcript5243.chr7.nic@TCAF1	transcript5243.chr7.nic	protein_coding	143902027,143875989,143862802,143862416,143861095,143860208,143858824,143857100,143852967	143902182,143876622,143863796,143862513,143861308,143860447,143859161,143857350,143854142	Gene ID= ENSG00000198420.9 TPM= 4.6 Transcript Type= NA
chr7	143851375	143902155	143851375	143902155	-	ENST00000479870.5@TCAF1	ENST00000479870.5	protein_coding	143901961,143875989,143862802,143862416,143861095,143860208,143858824,143857100,143851375	143902155,143876622,143863796,143862513,143861308,143860447,143859161,143857350,143854142	Gene ID= ENSG00000198420.9 TPM= 37.53 Transcript Type= protein_coding
chr7	144186083	144195655	144186083	144195655	-	ENST00000378115.2@ARHGEF35	ENST00000378115.2	protein_coding	144195538,144186083	144195655,144188395	Gene ID= ENSG00000213214.4 TPM= 1.06 Transcript Type= protein_coding
chr7	144255919	144257481	144255919	144257481	+	transcript5246.chr7.nnic@NA	transcript5246.chr7.nnic	NA	144255919	144257481	Gene ID= novel_gene_chr7_5247 TPM= 3.19 Transcript Type= NA
chr7	148698748	148731567	148698748	148731567	+	transcript5261.chr7.nic@CUL1	transcript5261.chr7.nic	protein_coding	148698748,148729962	148699029,148731567	Gene ID= ENSG00000055130.15 TPM= 4.25 Transcript Type= NA
chr7	148698645	148801025	148698645	148801025	+	ENST00000602748.5@CUL1	ENST00000602748.5	protein_coding	148698645,148729962,148753976,148756983,148759304,148759548,148760333,148766561,148767619,148783783,148783971,148786551,148786989,148788557,148789750,148790310,148792726,148797812,148797937,148798572,148799275,148800502	148698763,148730262,148754150,148757150,148759354,148759638,148760496,148766723,148767749,148783890,148784077,148786599,148787120,148788674,148789826,148790441,148792818,148797859,148798019,148798677,148799388,148801025	Gene ID= ENSG00000055130.15 TPM= 11.68 Transcript Type= protein_coding
chr7	148698912	148801036	148698912	148801036	+	ENST00000325222.8@CUL1	ENST00000325222.8	protein_coding	148698912,148729962,148753976,148756983,148759304,148759548,148760333,148766561,148767619,148783783,148783971,148786551,148786989,148788557,148789750,148790310,148792726,148797812,148797937,148798572,148799275,148800502	148699029,148730262,148754150,148757150,148759354,148759638,148760496,148766723,148767749,148783890,148784077,148786599,148787120,148788674,148789826,148790441,148792818,148797859,148798019,148798677,148799388,148801036	Gene ID= ENSG00000055130.15 TPM= 48.86 Transcript Type= protein_coding
chr7	148774453	148775842	148774453	148775842	+	transcript5262.chr7.nnic@NA	transcript5262.chr7.nnic	NA	148774453	148775842	Gene ID= novel_gene_chr7_5263 TPM= 2.12 Transcript Type= NA
chr7	148807385	148884245	148807385	148884245	-	ENST00000460911.5@EZH2	ENST00000460911.5	protein_coding	148884164,148847182,148846470,148832634,148829728,148828740,148827164,148826469,148819596,148817877,148817222,148816684,148815506,148814914,148813959,148811625,148810333,148809310,148809071,148807385	148884245,148847305,148846598,148832750,148829848,148828880,148827266,148826632,148819687,148818117,148817391,148816778,148815546,148815039,148814137,148811720,148810414,148809390,148809155,148807706	Gene ID= ENSG00000106462.10 TPM= 1.06 Transcript Type= protein_coding
chr7	148825676	148826219	148825676	148826219	+	transcript5266.chr7.nnic@NA	transcript5266.chr7.nnic	NA	148825676	148826219	Gene ID= novel_gene_chr7_5267 TPM= 2.12 Transcript Type= NA
chr7	148963315	148963410	148963315	148963410	+	ENST00000516507.1@RNY4	ENST00000516507.1	misc_RNA	148963315	148963410	Gene ID= ENSG00000252316.1 TPM= 11.68 Transcript Type= misc_RNA
chr7	148983755	148983856	148983755	148983856	+	ENST00000365484.1@RNY3	ENST00000365484.1	misc_RNA	148983755	148983856	Gene ID= ENSG00000202354.1 TPM= 15.93 Transcript Type= misc_RNA
chr7	148987136	148987248	148987136	148987248	-	ENST00000364228.1@RNY1	ENST00000364228.1	misc_RNA	148987136	148987248	Gene ID= ENSG00000201098.1 TPM= 1.06 Transcript Type= misc_RNA
chr7	149003062	149028641	149003062	149028641	-	ENST00000286091.8@PDIA4	ENST00000286091.8	protein_coding	149028321,149020967,149018992,149014904,149012155,149011846,149008159,149005897,149005141,149003062	149028641,149021147,149019197,149015042,149012360,149012004,149008310,149006053,149005374,149004209	Gene ID= ENSG00000155660.10 TPM= 36.11 Transcript Type= protein_coding
chr7	149069643	149090782	149069643	149090782	-	ENST00000316286.13@ZNF786	ENST00000316286.13	protein_coding	149090623,149074386,149069643	149090782,149074538,149072473	Gene ID= ENSG00000197362.14 TPM= 1.06 Transcript Type= protein_coding
chr7	149069963	149090705	149069963	149090705	-	ENST00000491431.1@ZNF786	ENST00000491431.1	protein_coding	149090623,149080591,149074386,149069963	149090705,149080717,149074538,149072473	Gene ID= ENSG00000197362.14 TPM= 5.31 Transcript Type= protein_coding
chr7	149102784	149126346	149102784	149126346	-	ENST00000378061.6@ZNF425	ENST00000378061.6	protein_coding	149126196,149118222,149112137,149102784	149126346,149118348,149112295,149105566	Gene ID= ENSG00000204947.8 TPM= 3.19 Transcript Type= protein_coding
chr7	149195485	149226248	149195485	149226248	+	ENST00000610704.4@ZNF282	ENST00000610704.4	protein_coding	149195485,149198333,149206696,149207351,149210585,149212358,149213701,149223812	149195754,149198752,149206822,149207470,149210704,149212471,149213814,149226248	Gene ID= ENSG00000170265.11 TPM= 10.62 Transcript Type= protein_coding
chr7	149239651	149255609	149239651	149255609	+	ENST00000335870.6@ZNF212	ENST00000335870.6	protein_coding	149239651,149250159,149250681,149252706,149253559	149239802,149250548,149250807,149252795,149255609	Gene ID= ENSG00000170260.8 TPM= 4.25 Transcript Type= protein_coding
chr7	149262171	149284991	149262171	149284991	+	ENST00000434415.5@ZNF783	ENST00000434415.5	protein_coding	149262171,149266335,149266819,149267097,149278399,149281505	149262357,149266730,149266945,149267222,149278527,149284991	Gene ID= ENSG00000204946.9 TPM= 9.56 Transcript Type= protein_coding
chr7	149431501	149460604	149431501	149460604	-	transcript5296.chr7.nnic@ZNF777	transcript5296.chr7.nnic	protein_coding	149460030,149455177,149454111,149450999,149436575,149431501	149460604,149456037,149454237,149451112,149436826,149432932	Gene ID= ENSG00000196453.7 TPM= 10.62 Transcript Type= NA
chr7	149472794	149497817	149472794	149497817	-	ENST00000340622.7@ZNF746	ENST00000340622.7	protein_coding	149497513,149494204,149493989,149492859,149477564,149476922,149472794	149497817,149494503,149494070,149492972,149477755,149477047,149475480	Gene ID= ENSG00000181220.15 TPM= 12.75 Transcript Type= protein_coding
chr7	149472794	149497815	149472794	149497815	-	transcript5298.chr7.nnic@ZNF746	transcript5298.chr7.nnic	protein_coding	149497513,149494204,149493989,149492859,149477564,149476922,149472794	149497815,149494503,149494115,149492972,149477755,149477047,149475480	Gene ID= ENSG00000181220.15 TPM= 10.62 Transcript Type= NA
chr7	149547154	149624748	149547154	149624748	-	transcript5304.chr7.nic@ZNF767P	transcript5304.chr7.nic	transcribed_unprocessed_pseudogene	149624542,149621260,149621046,149619924,149558608,149552801,149551655,149550868,149547154	149624748,149621559,149621172,149620037,149558839,149553016,149551826,149550946,149549374	Gene ID= ENSG00000133624.13 TPM= 5.31 Transcript Type= NA
chr7	149714951	149722039	149714951	149722039	+	transcript5312.chr7.nic@KRBA1	transcript5312.chr7.nic	protein_coding	149714951,149719546,149720008,149720835,149721380	149715066,149719672,149720127,149720990,149722039	Gene ID= ENSG00000133619.17 TPM= 2.12 Transcript Type= NA
chr7	149730750	149734571	149730750	149734571	+	transcript5316.chr7.nic@KRBA1	transcript5316.chr7.nic	protein_coding	149730750,149733206	149731776,149734571	Gene ID= ENSG00000133619.17 TPM= 10.62 Transcript Type= NA
chr7	149715011	149734571	149715011	149734571	+	ENST00000496259.5@KRBA1	ENST00000496259.5	protein_coding	149715011,149719546,149720008,149720835,149721383,149722422,149722783,149723734,149724652,149725315,149725887,149728523,149729188,149730147,149730428,149731672,149733206	149715066,149719672,149720127,149720990,149721535,149722553,149722956,149723889,149724849,149725488,149726060,149728675,149729370,149730341,149730568,149731776,149734571	Gene ID= ENSG00000133619.17 TPM= 12.75 Transcript Type= protein_coding
chr7	149764181	149766083	149764181	149766083	-	transcript5322.chr7.nnic@NA	transcript5322.chr7.nnic	NA	149764181	149766083	Gene ID= novel_gene_chr7_5323 TPM= 8.5 Transcript Type= NA
chr7	149867773	149873845	149867773	149873845	-	ENST00000461019.5@ATP6V0E2-AS1	ENST00000461019.5	antisense_RNA	149873224,149871642,149870242,149867773	149873845,149871796,149870351,149869858	Gene ID= ENSG00000204934.10 TPM= 4.78 Transcript Type= antisense_RNA
chr7	149867773	149873842	149867773	149873842	-	transcript5336.chr7.nnic@ATP6V0E2-AS1	transcript5336.chr7.nnic	antisense_RNA	149873224,149871677,149870242,149867773	149873842,149871796,149870351,149869858	Gene ID= ENSG00000204934.10 TPM= 3.72 Transcript Type= NA
chr7	150247213	150323700	150247213	150323700	-	transcript5339.chr7.nic@ACTR3C	transcript5339.chr7.nic	protein_coding	150323469,150295252,150293312,150289450,150286367,150284753,150248948,150247213	150323700,150295347,150293419,150289593,150286540,150284845,150249054,150247569	Gene ID= ENSG00000106526.10 TPM= 3.19 Transcript Type= NA
chr7	150323287	150338150	150323287	150338150	+	ENST00000359623.8@LRRC61	ENST00000359623.8	protein_coding	150323287,150325841,150336718	150323560,150326010,150338150	Gene ID= ENSG00000127399.14 TPM= 6.37 Transcript Type= protein_coding
chr7	150338319	150341674	150338319	150341674	-	ENST00000223271.7@RARRES2	ENST00000223271.7	protein_coding	150341578,150340436,150340100,150338986,150338615,150338319	150341674,150340629,150340204,150339081,150338741,150338439	Gene ID= ENSG00000106538.9 TPM= 11.68 Transcript Type= protein_coding
chr7	150338337	150341662	150338337	150341662	-	ENST00000467793.5@RARRES2	ENST00000467793.5	protein_coding	150341578,150340436,150340100,150338986,150338337	150341662,150340629,150340204,150339081,150338439	Gene ID= ENSG00000106538.9 TPM= 1.06 Transcript Type= protein_coding
chr7	150368790	150374044	150368790	150374044	+	ENST00000397281.6@REPIN1	ENST00000397281.6	protein_coding	150368790,150369671,150370760,150371228	150368941,150369868,150370884,150374044	Gene ID= ENSG00000214022.11 TPM= 31.28 Transcript Type= protein_coding
chr7	150368797	150374039	150368797	150374039	+	transcript5355.chr7.nnic@REPIN1	transcript5355.chr7.nnic	protein_coding	150368797,150370760,150371228	150368941,150370884,150374039	Gene ID= ENSG00000214022.11 TPM= 27.03 Transcript Type= NA
chr7	150368790	150374044	150368790	150374044	+	ENST00000444957.3@REPIN1	ENST00000444957.3	protein_coding	150368790,150371228	150368941,150374044	Gene ID= ENSG00000214022.11 TPM= 90.76 Transcript Type= protein_coding
chr7	150368812	150374033	150368812	150374033	+	transcript5365.chr7.nnic@REPIN1	transcript5365.chr7.nnic	protein_coding	150368812,150371231	150369013,150374033	Gene ID= ENSG00000214022.11 TPM= 26.77 Transcript Type= NA
chr7	150371164	150374039	150371164	150374039	+	ENST00000425389.2@REPIN1	ENST00000425389.2	protein_coding	150371164	150374039	Gene ID= ENSG00000214022.11 TPM= 27.03 Transcript Type= protein_coding
chr7	150368792	150372099	150368792	150372099	+	ENST00000466559.1@REPIN1	ENST00000466559.1	protein_coding	150368792,150371228	150368941,150372099	Gene ID= ENSG00000214022.11 TPM= 1.06 Transcript Type= protein_coding
chr7	150379335	150398631	150379335	150398631	+	ENST00000329630.9@ZNF775	ENST00000329630.9	protein_coding	150379335,150388422,150396513	150379392,150388501,150398631	Gene ID= ENSG00000196456.11 TPM= 14.87 Transcript Type= protein_coding
chr7	150404450	150405266	150404450	150405266	-	transcript5370.chr7.nnic@NA	transcript5370.chr7.nnic	NA	150404450	150405266	Gene ID= novel_gene_chr7_5371 TPM= 2.12 Transcript Type= NA
chr7	150450630	150479392	150450630	150479392	+	ENST00000307271.3@GIMAP8	ENST00000307271.3	protein_coding	150450630,150466671,150470829,150474012,150477092	150451175,150467334,150470874,150474638,150479392	Gene ID= ENSG00000171115.3 TPM= 18.06 Transcript Type= protein_coding
chr7	150450764	150479390	150450764	150479390	+	transcript5374.chr7.nnic@GIMAP8	transcript5374.chr7.nnic	protein_coding	150450764,150466671,150470829,150477092	150451175,150467334,150470874,150479390	Gene ID= ENSG00000171115.3 TPM= 3.19 Transcript Type= NA
chr7	150514830	150521073	150514830	150521073	+	ENST00000313543.4@GIMAP7	ENST00000313543.4	protein_coding	150514830,150519934	150514945,150521073	Gene ID= ENSG00000179144.4 TPM= 5.31 Transcript Type= protein_coding
chr7	150567277	150573955	150567277	150573955	+	ENST00000255945.3@GIMAP4	ENST00000255945.3	protein_coding	150567277,150569888,150572129	150567437,150569959,150573955	Gene ID= ENSG00000133574.9 TPM= 18.06 Transcript Type= protein_coding
chr7	150625375	150632385	150625375	150632385	-	ENST00000328902.9@GIMAP6	ENST00000328902.9	protein_coding	150632169,150630058,150625375	150632385,150630142,150628512	Gene ID= ENSG00000133561.15 TPM= 9.56 Transcript Type= protein_coding
chr7	150716557	150724284	150716557	150724284	+	ENST00000307194.5@GIMAP1	ENST00000307194.5	protein_coding	150716557,150719042,150720048	150716690,150719090,150724284	Gene ID= ENSG00000213203.2 TPM= 12.75 Transcript Type= protein_coding
chr7	150737348	150744063	150737348	150744063	+	ENST00000358647.4@GIMAP5	ENST00000358647.4	protein_coding	150737348,150740879,150742183	150737708,150740927,150744063	Gene ID= ENSG00000196329.11 TPM= 1.06 Transcript Type= protein_coding
chr7	150791287	150792339	150791287	150792339	-	transcript5406.chr7.nnic@TMEM176B	transcript5406.chr7.nnic	protein_coding	150792266,150792056,150791287	150792339,150792175,150791623	Gene ID= ENSG00000106565.17 TPM= 5.31 Transcript Type= NA
chr7	150791302	150800367	150791302	150800367	-	ENST00000450753.2@TMEM176B	ENST00000450753.2	protein_coding	150800298,150796366,150793544,150793088,150792056,150791302	150800367,150796574,150793600,150793315,150792175,150791623	Gene ID= ENSG00000106565.17 TPM= 12.75 Transcript Type= protein_coding
chr7	150791292	150800533	150791292	150800533	-	ENST00000434545.5@TMEM176B	ENST00000434545.5	protein_coding	150800291,150796366,150793961,150793544,150793088,150792056,150791292	150800533,150796577,150794071,150793600,150793315,150792175,150791623	Gene ID= ENSG00000106565.17 TPM= 9.03 Transcript Type= protein_coding
chr7	150791287	150801360	150791287	150801360	-	ENST00000447204.6@TMEM176B	ENST00000447204.6	protein_coding	150800993,150796366,150793961,150793544,150793088,150792056,150791287	150801360,150796574,150794071,150793600,150793315,150792175,150791623	Gene ID= ENSG00000106565.17 TPM= 3.72 Transcript Type= protein_coding
chr7	150800465	150805118	150800465	150805118	+	transcript5400.chr7.nic@TMEM176A	transcript5400.chr7.nic	protein_coding	150800465,150801536,150802215,150803400,150803620,150804362,150804827	150800828,150801724,150802325,150803456,150803832,150804485,150805118	Gene ID= ENSG00000002933.7 TPM= 2.47 Transcript Type= NA
chr7	150800403	150805109	150800403	150805109	+	ENST00000484928.5@TMEM176A	ENST00000484928.5	protein_coding	150800403,150801536,150802215,150803400,150803620,150804362,150804827	150800968,150801724,150802325,150803456,150803832,150804472,150805109	Gene ID= ENSG00000002933.7 TPM= 12.03 Transcript Type= protein_coding
chr7	150800543	150805120	150800543	150805120	+	ENST00000004103.7@TMEM176A	ENST00000004103.7	protein_coding	150800543,150801536,150802215,150803400,150803620,150804362,150804827	150800828,150801724,150802325,150803456,150803832,150804472,150805120	Gene ID= ENSG00000002933.7 TPM= 9.91 Transcript Type= protein_coding
chr7	150944929	150946696	150944929	150946696	-	transcript5425.chr7.nnic@NA	transcript5425.chr7.nnic	NA	150944929	150946696	Gene ID= novel_gene_chr7_5426 TPM= 4.25 Transcript Type= NA
chr7	150944961	150955906	150944961	150955906	-	ENST00000330883.8@KCNH2	ENST00000330883.8	protein_coding	150955396,150952425,150951448,150950921,150950168,150948856,150948444,150947606,150947328,150946877,150944961	150955906,150952853,150951835,150951120,150950420,150949049,150948543,150947878,150947514,150947054,150945514	Gene ID= ENSG00000055118.14 TPM= 13.81 Transcript Type= protein_coding
chr7	150949415	150978317	150949415	150978317	-	transcript5416.chr7.nnic@KCNH2	transcript5416.chr7.nnic	protein_coding	150978152,150974711,150959572,150958059,150957291,150952425,150951448,150950921,150949415	150978317,150974941,150959736,150958502,150957502,150952853,150951835,150951120,150950420	Gene ID= ENSG00000055118.14 TPM= 12.48 Transcript Type= NA
chr7	150949415	150978317	150949415	150978317	-	transcript5419.chr7.nnic@KCNH2	transcript5419.chr7.nnic	protein_coding	150978152,150974711,150959572,150958059,150957291,150950921,150949415	150978317,150974941,150959736,150958502,150957502,150952853,150950420	Gene ID= ENSG00000055118.14 TPM= 4.51 Transcript Type= NA
chr7	150949415	150955808	150949415	150955808	-	transcript5420.chr7.nnic@KCNH2	transcript5420.chr7.nnic	protein_coding	150955396,150952425,150951448,150950921,150949415	150955808,150952853,150951835,150951054,150950420	Gene ID= ENSG00000055118.14 TPM= 6.72 Transcript Type= NA
chr7	150944961	150978315	150944961	150978315	-	ENST00000262186.9@KCNH2	ENST00000262186.9	protein_coding	150977838,150974711,150959572,150958059,150957291,150952425,150951448,150950921,150950168,150948856,150948444,150947606,150947328,150946877,150944961	150978315,150974941,150959736,150958502,150957502,150952853,150951835,150951120,150950420,150949049,150948543,150947878,150947514,150947054,150945514	Gene ID= ENSG00000055118.14 TPM= 19.2 Transcript Type= protein_coding
chr7	150949423	150955810	150949423	150955810	-	ENST00000461280.1@KCNH2	ENST00000461280.1	protein_coding	150955396,150952425,150951448,150950921,150949423	150955810,150952853,150951835,150951120,150950420	Gene ID= ENSG00000055118.14 TPM= 18.41 Transcript Type= retained_intron
chr7	150949415	150978136	150949415	150978136	-	ENST00000532957.5@KCNH2	ENST00000532957.5	protein_coding	150977838,150974711,150959572,150958059,150957291,150952425,150951448,150950921,150949415	150978136,150974941,150959736,150958502,150957502,150952853,150951835,150951120,150950420	Gene ID= ENSG00000055118.14 TPM= 70.37 Transcript Type= retained_intron
chr7	150990995	151014588	150990995	151014588	+	ENST00000297494.7@NOS3	ENST00000297494.7	protein_coding	150990995,150993753,150995203,150996404,150996763,150998357,150998539,150998946,150999190,151000498,151001231,151001544,151001821,151002200,151006427,151006889,151007102,151008930,151009189,151009398,151010115,151010597,151010899,151012351,151013231,151013724,151014008	150991300,150993961,150995314,150996552,150996925,150998448,150998680,150999085,150999364,151000599,151001425,151001617,151001965,151002304,151006494,151007005,151007276,151009062,151009267,151009585,151010287,151010807,151010986,151012472,151013379,151013918,151014588	Gene ID= ENSG00000164867.10 TPM= 13.28 Transcript Type= protein_coding
chr7	150993770	151014944	150993770	151014944	+	transcript5428.chr7.nic@NOS3	transcript5428.chr7.nic	protein_coding	150993770,150995203,150996404,150996763,150998357,150998539,150998946,150999190,151000498,151001231,151001544,151001821,151002200,151006427,151006889,151007102,151008930,151009189,151009398,151010115,151010597,151010899,151012351,151013231,151013724,151014008	150993961,150995314,150996552,150996925,150998448,150998680,150999085,150999364,151000599,151001425,151001617,151001965,151002304,151006494,151007005,151007276,151009062,151009267,151009585,151010287,151010807,151010986,151012472,151013379,151013918,151014944	Gene ID= ENSG00000164867.10 TPM= 7.97 Transcript Type= NA
chr7	150993770	151003933	150993770	151003933	+	transcript5432.chr7.nic@NOS3	transcript5432.chr7.nic	protein_coding	150993770,150995203,150996404,150996763,150998357,150998539,150998946,151000498,151001231,151001544,151001821,151002200	150993961,150995314,150996552,150996925,150998448,150998680,150999364,151000599,151001425,151001617,151001965,151003933	Gene ID= ENSG00000164867.10 TPM= 2.12 Transcript Type= NA
chr7	151028423	151047782	151028423	151047782	+	ENST00000358849.8@ABCB8	ENST00000358849.8	protein_coding	151028423,151033605,151034273,151034505,151034724,151035581,151035882,151036073,151036544,151040268,151040498,151040828,151041099,151041961,151043971,151045209	151028610,151033917,151034428,151034599,151034829,151035742,151035967,151036170,151036649,151040301,151040634,151040922,151041232,151042108,151044221,151047782	Gene ID= ENSG00000197150.12 TPM= 13.81 Transcript Type= protein_coding
chr7	151028422	151047782	151028422	151047782	+	ENST00000542328.5@ABCB8	ENST00000542328.5	protein_coding	151028422,151034273,151034505,151034724,151035581,151035882,151036073,151036544,151040268,151040498,151040828,151041099,151041961,151043971,151045209	151028610,151034428,151034599,151034829,151035742,151035967,151036170,151036649,151040301,151040634,151040922,151041232,151042108,151044221,151047782	Gene ID= ENSG00000197150.12 TPM= 3.19 Transcript Type= protein_coding
chr7	151053812	151058530	151053812	151058530	-	ENST00000485972.5@CDK5	ENST00000485972.5	protein_coding	151057812,151057072,151056908,151056736,151056580,151055753,151055532,151055277,151055027,151054405,151054212,151053812	151058530,151057160,151056975,151056796,151056636,151055848,151055606,151055373,151055096,151054465,151054292,151054095	Gene ID= ENSG00000164885.12 TPM= 6.37 Transcript Type= protein_coding
chr7	151059570	151076527	151059570	151076527	+	ENST00000413384.6@SLC4A2	ENST00000413384.6	protein_coding	151059570,151061925,151064202,151064526,151064848,151066517,151066851,151067874,151069947,151070181,151070457,151070727,151071072,151071390,151071689,151071942,151074039,151074399,151074675,151075255,151075606,151076013,151076287	151059762,151062038,151064367,151064767,151064966,151066761,151066993,151068054,151070082,151070346,151070571,151070911,151071297,151071605,151071837,151072136,151074293,151074488,151074841,151075508,151075775,151076186,151076527	Gene ID= ENSG00000164889.13 TPM= 57.36 Transcript Type= protein_coding
chr7	151062634	151076523	151062634	151076523	+	ENST00000461735.1@SLC4A2	ENST00000461735.1	protein_coding	151062634,151064202,151064526,151064848,151066517,151066851,151067874,151069947,151070181,151070457,151070727,151071072,151071390,151071689,151071942,151074039,151074399,151074675,151075255,151075606,151076013,151076287	151063189,151064367,151064767,151064966,151066761,151066993,151068054,151070082,151070346,151070571,151070911,151071297,151071605,151071837,151072136,151074293,151074488,151074841,151075508,151075775,151076186,151076523	Gene ID= ENSG00000164889.13 TPM= 22.31 Transcript Type= protein_coding
chr7	151076626	151080855	151076626	151080855	-	transcript5458.chr7.nic@FASTK	transcript5458.chr7.nic	protein_coding	151080437,151079500,151078842,151078562,151077879,151077621,151077310,151077101,151076913,151076626	151080855,151079922,151079021,151078701,151078092,151077780,151077401,151077236,151077027,151076832	Gene ID= ENSG00000164896.19 TPM= 97.32 Transcript Type= NA
chr7	151076626	151080844	151076626	151080844	-	ENST00000297532.10@FASTK	ENST00000297532.10	protein_coding	151080685,151079500,151078842,151078562,151077879,151077621,151077310,151077101,151076913,151076626	151080844,151079922,151079021,151078701,151078092,151077780,151077401,151077236,151077027,151076832	Gene ID= ENSG00000164896.19 TPM= 128.65 Transcript Type= protein_coding
chr7	151076626	151080842	151076626	151080842	-	ENST00000353841.6@FASTK	ENST00000353841.6	protein_coding	151080685,151078842,151078562,151077879,151077621,151077310,151077101,151076913,151076626	151080842,151079021,151078701,151078092,151077780,151077401,151077236,151077027,151076832	Gene ID= ENSG00000164896.19 TPM= 7.48 Transcript Type= protein_coding
chr7	151076626	151080862	151076626	151080862	-	ENST00000482571.2@FASTK	ENST00000482571.2	protein_coding	151080685,151079500,151078923,151078562,151077879,151077621,151077310,151077101,151076913,151076626	151080862,151079922,151079021,151078701,151078092,151077780,151077401,151077236,151077027,151076832	Gene ID= ENSG00000164896.19 TPM= 10.66 Transcript Type= protein_coding
chr7	151076646	151080790	151076646	151080790	-	ENST00000482806.5@FASTK	ENST00000482806.5	protein_coding	151080685,151079500,151078842,151078562,151077879,151077621,151077101,151076913,151076646	151080790,151079922,151079021,151078701,151078092,151077780,151077401,151077027,151076832	Gene ID= ENSG00000164896.19 TPM= 6.46 Transcript Type= retained_intron
chr7	151081080	151083546	151081080	151083546	-	ENST00000297533.8@TMUB1	ENST00000297533.8	protein_coding	151083434,151082175,151081080	151083546,151082593,151081900	Gene ID= ENSG00000164897.12 TPM= 48.15 Transcript Type= protein_coding
chr7	151081086	151082908	151081086	151082908	-	ENST00000462940.1@TMUB1	ENST00000462940.1	protein_coding	151082175,151081086	151082908,151081900	Gene ID= ENSG00000164897.12 TPM= 9.91 Transcript Type= protein_coding
chr7	151081085	151083091	151081085	151083091	-	ENST00000392818.7@TMUB1	ENST00000392818.7	protein_coding	151082764,151082175,151081085	151083091,151082593,151081900	Gene ID= ENSG00000164897.12 TPM= 21.59 Transcript Type= protein_coding
chr7	151086444	151144434	151086444	151144434	+	transcript5517.chr7.nic@AGAP3	transcript5517.chr7.nic	protein_coding	151086444,151116793,151117095,151117371,151117636,151118210,151118505,151119987,151123794,151128580,151134400,151141898,151142163,151142412,151143341,151143737	151087072,151116851,151117182,151117456,151117777,151118344,151118632,151120145,151123886,151128684,151134568,151142052,151142253,151142634,151143596,151144434	Gene ID= ENSG00000133612.18 TPM= 25.14 Transcript Type= NA
chr7	151086460	151123636	151086460	151123636	+	transcript5520.chr7.nic@AGAP3	transcript5520.chr7.nic	protein_coding	151086460,151116793,151117095,151117371,151117636,151118210,151118505,151119987,151120520,151122725	151087072,151116851,151117182,151117456,151117777,151118344,151118632,151120145,151120745,151123636	Gene ID= ENSG00000133612.18 TPM= 18.06 Transcript Type= NA
chr7	151138903	151144434	151138903	151144434	+	transcript5530.chr7.nic@AGAP3	transcript5530.chr7.nic	protein_coding	151138903,151142163,151143341,151143737	151142052,151142634,151143596,151144434	Gene ID= ENSG00000133612.18 TPM= 10.27 Transcript Type= NA
chr7	151086388	151105115	151086388	151105115	+	transcript5531.chr7.nnic@AGAP3	transcript5531.chr7.nnic	protein_coding	151086388,151104364	151087072,151105115	Gene ID= ENSG00000133612.18 TPM= 4.25 Transcript Type= NA
chr7	151086742	151144432	151086742	151144432	+	ENST00000397238.6@AGAP3	ENST00000397238.6	protein_coding	151086742,151116793,151117095,151117371,151117636,151118210,151118505,151119987,151123794,151128580,151134400,151138143,151139979,151141898,151142163,151142412,151143341,151143737	151087072,151116851,151117182,151117456,151117777,151118344,151118632,151120145,151123886,151128684,151134568,151138313,151140116,151142052,151142253,151142634,151143596,151144432	Gene ID= ENSG00000133612.18 TPM= 24.08 Transcript Type= protein_coding
chr7	151175698	151187782	151175698	151187782	-	transcript5534.chr7.nnic@ASB10	transcript5534.chr7.nnic	protein_coding	151187452,151186392,151180939,151176563,151176112,151175698	151187782,151186659,151181503,151176676,151176297,151175966	Gene ID= ENSG00000146926.10 TPM= 3.72 Transcript Type= NA
chr7	151175698	151187854	151175698	151187854	-	transcript5535.chr7.nnic@ASB10	transcript5535.chr7.nnic	protein_coding	151187452,151186392,151176563,151176112,151175698	151187854,151186659,151176676,151176297,151175966	Gene ID= ENSG00000146926.10 TPM= 3.19 Transcript Type= NA
chr7	151175698	151187832	151175698	151187832	-	ENST00000377867.7@ASB10	ENST00000377867.7	protein_coding	151187452,151186392,151180939,151176563,151176112,151175698	151187832,151186659,151181458,151176676,151176297,151175966	Gene ID= ENSG00000146926.10 TPM= 39.83 Transcript Type= protein_coding
chr7	151213510	151226955	151213510	151226955	-	transcript5541.chr7.nic@ABCF2	transcript5541.chr7.nic	protein_coding	151226738,151226305,151224776,151223932,151223678,151222521,151221578,151219064,151218754,151218561,151218081,151215967,151215604,151214879,151213510	151226955,151226500,151224988,151224114,151223849,151222616,151221680,151219159,151218873,151218650,151218191,151216029,151215732,151215082,151214191	Gene ID= ENSG00000033050.7 TPM= 3.19 Transcript Type= NA
chr7	151207837	151227166	151207837	151227166	-	ENST00000222388.6@ABCF2	ENST00000222388.6	protein_coding	151227163,151226305,151224776,151223932,151223678,151222521,151221578,151219064,151218754,151218561,151218081,151215967,151215604,151214879,151214058,151207837	151227166,151226500,151224988,151224114,151223849,151222616,151221680,151219159,151218873,151218650,151218191,151216029,151215732,151215082,151214191,151208107	Gene ID= ENSG00000033050.7 TPM= 3.19 Transcript Type= protein_coding
chr7	151212490	151227230	151212490	151227230	-	ENST00000287844.6@ABCF2	ENST00000287844.6	protein_coding	151227163,151226305,151224776,151223932,151223678,151222521,151221578,151219064,151218754,151218561,151218081,151215967,151215604,151214879,151212490	151227230,151226500,151224988,151224114,151223849,151222616,151221680,151219159,151218873,151218650,151218191,151216029,151215732,151215082,151214191	Gene ID= ENSG00000033050.7 TPM= 22.31 Transcript Type= protein_coding
chr7	151232457	151238819	151232457	151238819	+	transcript5571.chr7.nnic@CHPF2	transcript5571.chr7.nnic	protein_coding	151232457,151235048,151237374	151234274,151235612,151238819	Gene ID= ENSG00000033100.16 TPM= 9.03 Transcript Type= NA
chr7	151232499	151238827	151232499	151238827	+	ENST00000035307.6@CHPF2	ENST00000035307.6	protein_coding	151232499,151235048,151236408,151237374	151234274,151235612,151236590,151238827	Gene ID= ENSG00000033100.16 TPM= 53.64 Transcript Type= protein_coding
chr7	151238973	151277452	151238973	151277452	-	ENST00000392811.6@SMARCD3	ENST00000392811.6	protein_coding	151277077,151275114,151245460,151243659,151242721,151242481,151242137,151241877,151241492,151240425,151240112,151239624,151239396,151238973	151277452,151275251,151245671,151243701,151242843,151242603,151242232,151241978,151241653,151240522,151240247,151239746,151239497,151239156	Gene ID= ENSG00000082014.16 TPM= 68.44 Transcript Type= protein_coding
chr7	151238974	151248707	151238974	151248707	-	transcript5565.chr7.nic@SMARCD3	transcript5565.chr7.nic	protein_coding	151245460,151243659,151242721,151242481,151242137,151240112,151239624,151239396,151238974	151248707,151243701,151242843,151242603,151242232,151241978,151239746,151239497,151239156	Gene ID= ENSG00000082014.16 TPM= 11.26 Transcript Type= NA
chr7	151238973	151248973	151238973	151248973	-	ENST00000262188.12@SMARCD3	ENST00000262188.12	protein_coding	151248485,151245460,151243659,151242721,151242481,151242137,151241877,151241492,151240425,151240112,151239624,151239396,151238973	151248973,151245671,151243701,151242843,151242603,151242232,151241978,151241653,151240522,151240247,151239746,151239497,151239156	Gene ID= ENSG00000082014.16 TPM= 135.35 Transcript Type= protein_coding
chr7	151341699	151378449	151341699	151378449	+	ENST00000413040.6@NUB1	ENST00000413040.6	protein_coding	151341699,151345348,151349073,151351424,151352812,151355768,151356128,151360141,151366939,151367861,151368735,151374097,151375848,151376634,151377047	151341846,151345466,151349240,151351482,151352882,151355950,151356222,151360247,151367125,151367968,151368887,151374201,151375943,151376811,151378449	Gene ID= ENSG00000013374.15 TPM= 20.71 Transcript Type= protein_coding
chr7	151341711	151378449	151341711	151378449	+	ENST00000568733.5@NUB1	ENST00000568733.5	protein_coding	151341711,151345348,151349073,151351424,151352812,151355768,151356128,151360141,151366939,151367861,151368735,151374097,151375848,151376634,151377047	151341846,151345466,151349240,151351482,151352882,151355950,151356222,151360247,151367125,151367968,151368887,151374243,151375943,151376811,151378449	Gene ID= ENSG00000013374.15 TPM= 10.62 Transcript Type= protein_coding
chr7	151341809	151361237	151341809	151361237	+	transcript5588.chr7.nic@NUB1	transcript5588.chr7.nic	protein_coding	151341809,151345348,151349073,151351424,151352812,151355768,151356128,151360141,151361059	151341965,151345466,151349240,151351482,151352882,151355950,151356222,151360914,151361237	Gene ID= ENSG00000013374.15 TPM= 2.12 Transcript Type= NA
chr7	151341764	151361193	151341764	151361193	+	transcript5589.chr7.nic@NUB1	transcript5589.chr7.nic	protein_coding	151341764,151345348,151349073,151351424,151352812,151355768,151356128,151360141	151341846,151345466,151349240,151351482,151352882,151355950,151356222,151361193	Gene ID= ENSG00000013374.15 TPM= 2.66 Transcript Type= NA
chr7	151341812	151355815	151341812	151355815	+	ENST00000470229.5@NUB1	ENST00000470229.5	protein_coding	151341812,151345348,151349073,151351424,151352812,151355768	151341965,151345466,151349240,151351482,151352882,151355815	Gene ID= ENSG00000013374.15 TPM= 1.06 Transcript Type= protein_coding
chr7	151341804	151361249	151341804	151361249	+	ENST00000468404.5@NUB1	ENST00000468404.5	protein_coding	151341804,151345348,151349073,151351424,151352812,151355768,151356128,151360141,151361059	151341846,151345466,151349240,151351482,151352882,151355950,151356222,151360914,151361249	Gene ID= ENSG00000013374.15 TPM= 6.37 Transcript Type= nonsense_mediated_decay
chr7	151466012	151519924	151466012	151519924	-	ENST00000262187.9@RHEB	ENST00000262187.9	protein_coding	151519460,151490943,151484737,151477333,151471549,151471394,151470571,151466012	151519924,151491014,151484804,151477415,151471605,151471441,151470652,151467211	Gene ID= ENSG00000106615.9 TPM= 231.55 Transcript Type= protein_coding
chr7	151556124	151632353	151556124	151632353	-	ENST00000418337.6@PRKAG2	ENST00000418337.6	protein_coding	151632069,151595345,151576371,151574891,151572664,151570171,151568716,151565720,151565346,151564078,151560524,151556124	151632353,151595454,151576452,151574949,151572709,151570225,151568842,151565885,151565383,151564224,151560617,151557232	Gene ID= ENSG00000106617.13 TPM= 91.88 Transcript Type= protein_coding
chr7	151556161	151736314	151556161	151736314	-	ENST00000492843.5@PRKAG2	ENST00000492843.5	protein_coding	151735900,151675420,151632069,151595345,151576371,151574891,151572664,151570171,151568716,151565720,151565346,151564078,151560524,151556161	151736314,151675637,151632138,151595454,151576452,151574949,151572709,151570225,151568842,151565885,151565383,151564224,151560617,151557232	Gene ID= ENSG00000106617.13 TPM= 18.06 Transcript Type= protein_coding
chr7	151556120	151558946	151556120	151558946	-	transcript5616.chr7.nnic@NA	transcript5616.chr7.nnic	NA	151556120	151558946	Gene ID= novel_gene_chr7_5617 TPM= 4.78 Transcript Type= NA
chr7	151733864	151736263	151733864	151736263	-	transcript5614.chr7.nnic@NA	transcript5614.chr7.nnic	NA	151733864	151736263	Gene ID= novel_gene_chr7_5615 TPM= 2.12 Transcript Type= NA
chr7	151877465	151879223	151877465	151879223	+	ENST00000467458.2@PRKAG2-AS1	ENST00000467458.2	antisense_RNA	151877465,151878562	151877866,151879223	Gene ID= ENSG00000239911.2 TPM= 1.06 Transcript Type= antisense_RNA
chr7	152025642	152122347	152025642	152122347	+	transcript5622.chr7.nnic@GALNT11	transcript5622.chr7.nnic	protein_coding	152025642,152079287,152094190,152100798,152103112,152105245,152108038,152110528,152113246,152117157,152118678,152120831,152121546	152025884,152079408,152094522,152100921,152103278,152105370,152108287,152110645,152113398,152117375,152118782,152120968,152122347	Gene ID= ENSG00000178234.12 TPM= 6.37 Transcript Type= NA
chr7	152025693	152122347	152025693	152122347	+	ENST00000430044.6@GALNT11	ENST00000430044.6	protein_coding	152025693,152094190,152100798,152103112,152105245,152108038,152110528,152113246,152117157,152118678,152120831,152121546	152025884,152094522,152100921,152103278,152105370,152108287,152110645,152113398,152117375,152118782,152120968,152122347	Gene ID= ENSG00000178234.12 TPM= 33.99 Transcript Type= protein_coding
chr7	152162773	152181682	152162773	152181682	-	transcript5632.chr7.nic@KMT2C	transcript5632.chr7.nic	protein_coding	152180711,152179834,152176191,152174131,152171264,152169186,152167146,152162773	152181682,152180126,152178010,152174242,152171342,152169249,152167378,152163826	Gene ID= ENSG00000055609.17 TPM= 5.31 Transcript Type= NA
chr7	152202975	152436570	152202975	152436570	-	transcript5633.chr7.nnic@KMT2C	transcript5633.chr7.nnic	protein_coding	152436512,152435626,152358587,152330601,152315138,152311798,152309966,152273705,152265038,152263016,152252546,152251939,152250853,152249876,152247902,152238707,152235817,152230220,152229923,152224435,152224015,152222573,152222001,152220523,152207300,152205106,152202975	152436570,152435787,152358675,152330739,152315338,152311946,152310075,152273867,152265209,152263130,152252715,152252090,152250966,152249953,152248620,152238826,152235933,152230321,152230027,152224616,152224179,152222682,152222066,152220735,152207428,152205225,152203064	Gene ID= ENSG00000055609.17 TPM= 3.72 Transcript Type= NA
chr7	152202975	152436012	152202975	152436012	-	transcript5636.chr7.nic@KMT2C	transcript5636.chr7.nic	protein_coding	152435626,152358587,152330601,152315138,152311798,152309966,152273705,152265038,152263016,152252546,152251939,152250853,152249876,152247902,152238707,152235817,152230220,152229923,152224435,152224015,152222573,152222001,152220523,152207300,152205106,152202975	152436012,152358675,152330739,152315338,152311946,152310075,152273867,152265209,152263130,152252715,152252090,152250966,152249953,152248620,152238826,152235933,152230321,152230027,152224616,152224179,152222682,152222066,152220735,152207428,152205225,152203064	Gene ID= ENSG00000055609.17 TPM= 7.97 Transcript Type= NA
chr7	152251056	152253543	152251056	152253543	-	transcript5640.chr7.nic@KMT2C	transcript5640.chr7.nic	protein_coding	152252546,152251056	152253543,152252090	Gene ID= ENSG00000055609.17 TPM= 2.12 Transcript Type= NA
chr7	152463786	152465549	152463786	152465549	+	ENST00000564834.1@LINC01003	ENST00000564834.1	lincRNA	152463786	152465549	Gene ID= ENSG00000261455.1 TPM= 14.87 Transcript Type= lincRNA
chr7	152759789	152854949	152759789	152854949	+	transcript5642.chr7.nic@ACTR3B	transcript5642.chr7.nic	protein_coding	152759789,152783187,152800531,152801621,152811697,152814550,152816481,152820299,152823342,152825030,152852126,152853494,152854458	152759926,152783242,152800655,152801731,152811733,152814645,152816588,152820442,152823515,152825122,152852251,152853577,152854949	Gene ID= ENSG00000133627.17 TPM= 2.12 Transcript Type= NA
chr7	152759779	152855378	152759779	152855378	+	transcript5644.chr7.nic@ACTR3B	transcript5644.chr7.nic	protein_coding	152759779,152800531,152801621,152811697,152814550,152816481,152820299,152823342,152825030,152852126,152853494,152854458	152759926,152800655,152801731,152811733,152814645,152816588,152820442,152823515,152825122,152852251,152853577,152855378	Gene ID= ENSG00000133627.17 TPM= 3.72 Transcript Type= NA
chr7	152759749	152855378	152759749	152855378	+	ENST00000256001.12@ACTR3B	ENST00000256001.12	protein_coding	152759749,152783187,152800531,152801621,152814550,152816481,152820299,152823342,152825030,152852126,152853494,152854458	152759926,152783242,152800655,152801731,152814645,152816588,152820442,152823515,152825122,152852251,152853577,152855378	Gene ID= ENSG00000133627.17 TPM= 4.78 Transcript Type= protein_coding
chr7	152759788	152854949	152759788	152854949	+	ENST00000397282.2@ACTR3B	ENST00000397282.2	protein_coding	152759788,152800531,152801621,152814550,152816481,152820299,152823342,152825030,152852126,152853494,152854458	152759926,152800655,152801731,152814645,152816588,152820442,152823515,152825122,152852251,152853577,152854949	Gene ID= ENSG00000133627.17 TPM= 1.06 Transcript Type= protein_coding
chr7	154951226	154952188	154951226	154952188	+	ENST00000608064.1@AC093726.1	ENST00000608064.1	antisense_RNA	154951226	154952188	Gene ID= ENSG00000272760.1 TPM= 1.06 Transcript Type= antisense_RNA
chr7	155003448	155005703	155003448	155005703	+	ENST00000608317.1@PAXIP1-AS1	ENST00000608317.1	lincRNA	155003448	155005703	Gene ID= ENSG00000273344.1 TPM= 6.37 Transcript Type= lincRNA
chr7	155296573	155297657	155296573	155297657	-	transcript5660.chr7.nnic@NA	transcript5660.chr7.nnic	NA	155296573	155297657	Gene ID= novel_gene_chr7_5661 TPM= 2.12 Transcript Type= NA
chr7	155297809	155310233	155297809	155310233	+	transcript5665.chr7.nic@INSIG1	transcript5665.chr7.nic	protein_coding	155297809,155298259,155301566,155302251,155302747,155303825,155308241	155297959,155298697,155301690,155302417,155302846,155303895,155310233	Gene ID= ENSG00000186480.12 TPM= 2.12 Transcript Type= NA
chr7	155297776	155310235	155297776	155310235	+	ENST00000340368.8@INSIG1	ENST00000340368.8	protein_coding	155297776,155298259,155301566,155302251,155302747,155308241	155297959,155298697,155301690,155302417,155302846,155310235	Gene ID= ENSG00000186480.12 TPM= 31.86 Transcript Type= protein_coding
chr7	155644451	155701183	155644451	155701183	+	ENST00000287912.7@RBM33	ENST00000287912.7	protein_coding	155644451,155665175,155672867,155678608,155680590,155700773	155644919,155665253,155672915,155678684,155680908,155701183	Gene ID= ENSG00000184863.10 TPM= 19.12 Transcript Type= protein_coding
chr7	156639432	156640563	156639432	156640563	-	ENST00000435354.1@LINC01006	ENST00000435354.1	lincRNA	156640536,156639432	156640563,156639948	Gene ID= ENSG00000182648.11 TPM= 1.06 Transcript Type= lincRNA
chr7	156638363	156640654	156638363	156640654	-	ENST00000333319.6@LINC01006	ENST00000333319.6	lincRNA	156638363	156640654	Gene ID= ENSG00000182648.11 TPM= 14.87 Transcript Type= lincRNA
chr7	156677791	156893230	156677791	156893230	-	ENST00000353442.9@LMBR1	ENST00000353442.9	protein_coding	156892928,156836813,156833753,156826605,156796389,156763669,156763108,156762134,156756393,156734177,156728644,156727930,156725764,156725435,156724112,156688030,156677791	156893230,156836885,156833792,156826744,156796492,156763795,156763176,156762198,156756465,156734257,156728720,156728007,156725837,156725525,156724178,156688191,156684163	Gene ID= ENSG00000105983.20 TPM= 1.06 Transcript Type= protein_coding
chr7	156680877	156893208	156680877	156893208	-	ENST00000359422.8@LMBR1	ENST00000359422.8	protein_coding	156892928,156836813,156833753,156826605,156796389,156763669,156763108,156762134,156756393,156734177,156728644,156727930,156725764,156725435,156724112,156680877	156893208,156836885,156833792,156826744,156796492,156763795,156763176,156762198,156756465,156734257,156728720,156728007,156725837,156725525,156724178,156684163	Gene ID= ENSG00000105983.20 TPM= 1.06 Transcript Type= protein_coding
chr7	156949713	156963352	156949713	156963352	+	transcript5700.chr7.nic@NOM1	transcript5700.chr7.nic	protein_coding	156949713,156952474,156954103,156959851,156962151,156963008	156950724,156952598,156954298,156960174,156962261,156963352	Gene ID= ENSG00000146909.7 TPM= 2.12 Transcript Type= NA
chr7	157138938	157269372	157138938	157269372	+	transcript5705.chr7.nnic@UBE3C	transcript5705.chr7.nnic	protein_coding	157138938,157139222,157163810,157169048,157170304,157174919,157178690,157181518,157182108,157183878,157186834,157201721,157207398,157207703,157216867,157220689,157223254,157225407,157231080,157248368,157253954,157254244,157256914,157267585	157139164,157139338,157163863,157169122,157170450,157175034,157178847,157181671,157182328,157184029,157187021,157201807,157207555,157207935,157216971,157220776,157223351,157225539,157231327,157248580,157254142,157254310,157257044,157269372	Gene ID= ENSG00000009335.17 TPM= 12.21 Transcript Type= NA
chr7	157138913	157269372	157138913	157269372	+	ENST00000348165.9@UBE3C	ENST00000348165.9	protein_coding	157138913,157163810,157169048,157170304,157174919,157178690,157181518,157182108,157183878,157186834,157201721,157207398,157207703,157216867,157220689,157223254,157225407,157231080,157248368,157253954,157254244,157256914,157267585	157139338,157163863,157169122,157170450,157175034,157178847,157181671,157182328,157184029,157187021,157201807,157207555,157207935,157216971,157220776,157223351,157225539,157231327,157248580,157254142,157254310,157257044,157269372	Gene ID= ENSG00000009335.17 TPM= 31.33 Transcript Type= protein_coding
chr7	157190012	157192875	157190012	157192875	+	transcript5717.chr7.nnic@NA	transcript5717.chr7.nnic	NA	157190012	157192875	Gene ID= novel_gene_chr7_5718 TPM= 2.12 Transcript Type= NA
chr7	157336966	157417439	157336966	157417439	+	ENST00000262177.8@DNAJB6	ENST00000262177.8	protein_coding	157336966,157358547,157363161,157366502,157367373,157382246,157384867,157385541,157409795,157416016	157337144,157358637,157363270,157366561,157367483,157382377,157385008,157385611,157410001,157417439	Gene ID= ENSG00000105993.14 TPM= 358.21 Transcript Type= protein_coding
chr7	157336966	157386324	157336966	157386324	+	ENST00000429029.6@DNAJB6	ENST00000429029.6	protein_coding	157336966,157358547,157363161,157366502,157367373,157382246,157384867,157385541	157337144,157358637,157363270,157366561,157367483,157382377,157385008,157386324	Gene ID= ENSG00000105993.14 TPM= 76.48 Transcript Type= protein_coding
chr7	157337023	157417433	157337023	157417433	+	ENST00000459889.5@DNAJB6	ENST00000459889.5	protein_coding	157337023,157358547,157363161,157366502,157367373,157382246,157384867,157385541,157409795,157416016	157337144,157358637,157363270,157366561,157367483,157382377,157385008,157385611,157415529,157417433	Gene ID= ENSG00000105993.14 TPM= 40.36 Transcript Type= nonsense_mediated_decay
chr7	157539056	157569057	157539056	157569057	-	transcript5744.chr7.nic@PTPRN2	transcript5744.chr7.nic	protein_coding	157568902,157548946,157539056	157569057,157549019,157540785	Gene ID= ENSG00000155093.17 TPM= 5.31 Transcript Type= NA
chr7	158631313	158704829	158631313	158704829	-	ENST00000356309.7@NCAPG2	ENST00000356309.7	protein_coding	158704724,158701822,158693309,158692842,158690568,158689819,158687348,158686172,158683300,158680721,158679960,158675477,158671514,158664528,158664184,158662194,158658338,158656552,158656260,158655339,158655118,158654595,158652293,158650832,158646460,158645519,158644289,158631313	158704829,158701938,158693497,158692956,158690722,158689953,158687442,158686241,158683386,158680816,158680085,158675656,158671666,158664750,158664296,158662367,158658408,158656705,158656433,158655455,158655258,158654694,158652480,158650972,158646563,158645619,158644388,158631717	Gene ID= ENSG00000146918.19 TPM= 2.12 Transcript Type= protein_coding
chr7	158730995	158829564	158730995	158829564	-	transcript5748.chr7.nnic@ESYT2	transcript5748.chr7.nnic	protein_coding	158829089,158799031,158797942,158793650,158788345,158788004,158773341,158767654,158764677,158763083,158761496,158760058,158759486,158757332,158749649,158748194,158743529,158741523,158739023,158737048,158735503,158734422,158730995	158829564,158799072,158798076,158793726,158788417,158788093,158773396,158767774,158764853,158763165,158761544,158760147,158759581,158757433,158749723,158748280,158743678,158741896,158739121,158737179,158735608,158734471,158734252	Gene ID= ENSG00000117868.15 TPM= 12.75 Transcript Type= NA
chr7	158730995	158829628	158730995	158829628	-	ENST00000251527.9@ESYT2	ENST00000251527.9	protein_coding	158829089,158799031,158797942,158793650,158788345,158788004,158773341,158767654,158764677,158763083,158761496,158760058,158759486,158749649,158748194,158743529,158741523,158739023,158737048,158735503,158734422,158730995	158829628,158799072,158798076,158793726,158788417,158788093,158773396,158767774,158764853,158763165,158761544,158760147,158759581,158749723,158748280,158743678,158741896,158739121,158737179,158735608,158734471,158734252	Gene ID= ENSG00000117868.15 TPM= 30.8 Transcript Type= protein_coding
chr7	158856558	158891334	158856558	158891334	+	transcript5764.chr7.nic@WDR60	transcript5764.chr7.nic	protein_coding	158856558,158869855,158871142,158876609,158879684,158884564,158887021,158891265	158856750,158869908,158871562,158876691,158879989,158884619,158887075,158891334	Gene ID= ENSG00000126870.15 TPM= 4.25 Transcript Type= NA
chr7	158856578	158946189	158856578	158946189	+	ENST00000407559.7@WDR60	ENST00000407559.7	protein_coding	158856578,158869855,158871142,158876609,158879684,158884564,158887021,158891265,158901739,158902376,158905989,158911550,158912985,158914233,158918740,158922377,158923571,158926187,158926402,158926992,158930455,158934129,158934418,158941925,158945581	158856750,158869908,158871562,158876691,158879989,158884619,158887075,158891333,158901816,158902595,158906091,158911679,158913096,158914321,158918869,158922549,158923733,158926300,158926463,158927043,158930515,158934228,158934549,158942148,158946189	Gene ID= ENSG00000126870.15 TPM= 14.87 Transcript Type= protein_coding
chr7	159028175	159144957	159028175	159144957	-	ENST00000262178.6@VIPR2	ENST00000262178.6	protein_coding	159144721,159142446,159109812,159103757,159058481,159043035,159036752,159035952,159034581,159034213,159031938,159031828,159028175	159144957,159142545,159109919,159103854,159058578,159043176,159036902,159036012,159034650,159034304,159032067,159031869,159030789	Gene ID= ENSG00000106018.13 TPM= 54.17 Transcript Type= protein_coding
chr7	159030455	159097204	159030455	159097204	-	ENST00000377633.7@VIPR2	ENST00000377633.7	protein_coding	159096835,159058481,159043035,159036752,159035952,159034581,159034213,159031938,159031828,159030455	159097204,159058578,159043176,159036902,159036012,159034650,159034304,159032067,159031869,159030789	Gene ID= ENSG00000106018.13 TPM= 1.06 Transcript Type= protein_coding
chr7	159038886	159144933	159038886	159144933	-	transcript5786.chr7.nnic@VIPR2	transcript5786.chr7.nnic	protein_coding	159144721,159142446,159109812,159103757,159058481,159043035,159038886	159144933,159142545,159109919,159103854,159058578,159043176,159039810	Gene ID= ENSG00000106018.13 TPM= 2.12 Transcript Type= NA
chr7	159072697	159075781	159072697	159075781	-	transcript5799.chr7.nnic@NA	transcript5799.chr7.nnic	NA	159072697	159075781	Gene ID= novel_gene_chr7_5800 TPM= 2.12 Transcript Type= NA
chr7	159092652	159097061	159092652	159097061	-	transcript5795.chr7.nnic@NA	transcript5795.chr7.nnic	NA	159092652	159097061	Gene ID= novel_gene_chr7_5796 TPM= 15.93 Transcript Type= NA
chr7	159144130	159145156	159144130	159145156	-	transcript5797.chr7.nnic@NA	transcript5797.chr7.nnic	NA	159144130	159145156	Gene ID= novel_gene_chr7_5798 TPM= 4.25 Transcript Type= NA
chr8	230008	232231	230008	232231	-	ENST00000606507.1@RPL23AP53	ENST00000606507.1	transcribed_processed_pseudogene	232129,230804,230008	232231,230907,230170	Gene ID= ENSG00000223508.5 TPM= 4.25 Transcript Type= processed_transcript
chr8	232397	247340	232397	247340	+	ENST00000398612.2@ZNF596	ENST00000398612.2	protein_coding	232397,240824,242887,243722,244619,245154	232694,240907,243013,243805,244701,247340	Gene ID= ENSG00000172748.13 TPM= 1.06 Transcript Type= protein_coding
chr8	232468	235572	232468	235572	+	transcript18.chr8.nnic@NA	transcript18.chr8.nnic	NA	232468	235572	Gene ID= novel_gene_chr8_19 TPM= 2.12 Transcript Type= NA
chr8	406808	469690	406808	469690	+	ENST00000350302.7@FBXO25	ENST00000350302.7	protein_coding	406808,413073,431341,432886,435615,449990,451269,458369,463007,468715	407066,413213,431444,432935,435707,450083,451453,458551,463150,469690	Gene ID= ENSG00000147364.16 TPM= 4.25 Transcript Type= protein_coding
chr8	406910	469055	406910	469055	+	transcript25.chr8.nic@FBXO25	transcript25.chr8.nic	protein_coding	406910,413073,431341,435615,449990,451269,458369,463007,467720,468715	407066,413213,431444,435707,450083,451453,458551,463150,467746,469055	Gene ID= ENSG00000147364.16 TPM= 5.31 Transcript Type= NA
chr8	664200	731239	664200	731239	-	ENST00000262109.7@ERICH1	ENST00000262109.7	protein_coding	731140,715861,692478,673289,668598,664200	731239,716007,692612,674047,668792,664676	Gene ID= ENSG00000104714.13 TPM= 14.87 Transcript Type= protein_coding
chr8	1762625	1763297	1762625	1763297	-	ENST00000518481.1@AC100810.1	ENST00000518481.1	antisense_RNA	1763023,1762625	1763297,1762928	Gene ID= ENSG00000253982.1 TPM= 37.18 Transcript Type= antisense_RNA
chr8	1763815	1781357	1763815	1781357	+	ENST00000637083.1@CLN8	ENST00000637083.1	protein_coding	1763815,1765068,1770932,1780250	1763885,1765223,1771597,1781357	Gene ID= ENSG00000182372.9 TPM= 1.06 Transcript Type= protein_coding
chr8	1763704	1786570	1763704	1786570	+	ENST00000331222.5@CLN8	ENST00000331222.5	protein_coding	1763704,1770932,1780250	1763885,1771597,1786570	Gene ID= ENSG00000182372.9 TPM= 12.75 Transcript Type= protein_coding
chr8	1763800	1781354	1763800	1781354	+	ENST00000637156.1@CLN8	ENST00000637156.1	protein_coding	1763800,1770932,1780250	1763925,1771597,1781354	Gene ID= ENSG00000182372.9 TPM= 1.06 Transcript Type= protein_coding
chr8	1973878	2006936	1973878	2006936	+	ENST00000320248.3@KBTBD11	ENST00000320248.3	protein_coding	1973878,2000285	1973935,2006936	Gene ID= ENSG00000176595.3 TPM= 14.87 Transcript Type= protein_coding
chr8	2037863	2040176	2037863	2040176	-	transcript55.chr8.nnic@NA	transcript55.chr8.nnic	NA	2037863	2040176	Gene ID= novel_gene_chr8_56 TPM= 3.19 Transcript Type= NA
chr8	2045040	2145456	2045040	2145456	+	ENST00000262113.8@MYOM2	ENST00000262113.8	protein_coding	2045040,2050755,2052158,2057348,2057623,2059153,2069278,2069447,2072345,2073339,2076141,2078734,2079560,2085263,2090008,2092346,2093970,2096247,2098857,2100876,2102667,2106242,2106491,2108786,2109395,2115960,2116216,2117885,2123252,2123555,2124179,2129127,2140723,2141141,2142375,2143401,2144664	2045168,2050873,2052313,2057486,2057780,2059245,2069366,2069497,2072509,2073500,2076282,2078933,2079613,2085390,2090191,2092520,2094091,2096434,2098983,2101054,2102781,2106398,2106597,2108830,2109531,2116104,2116275,2117952,2123365,2123642,2124217,2129232,2140886,2141177,2142397,2143456,2145456	Gene ID= ENSG00000036448.9 TPM= 1338.33 Transcript Type= protein_coding
chr8	2058000	2061361	2058000	2061361	-	transcript109.chr8.nnic@NA	transcript109.chr8.nnic	NA	2058000	2061361	Gene ID= novel_gene_chr8_110 TPM= 67.98 Transcript Type= NA
chr8	2059744	2062970	2059744	2062970	-	transcript107.chr8.nnic@NA	transcript107.chr8.nnic	NA	2059744	2062970	Gene ID= novel_gene_chr8_108 TPM= 13.28 Transcript Type= NA
chr8	2151935	2153904	2151935	2153904	-	transcript113.chr8.nnic@NA	transcript113.chr8.nnic	NA	2151935	2153904	Gene ID= novel_gene_chr8_114 TPM= 13.81 Transcript Type= NA
chr8	6406592	6648504	6406592	6648504	+	ENST00000344683.9@MCPH1	ENST00000344683.9	protein_coding	6406592,6409279,6414765,6431499,6436048,6438953,6442067,6444393,6455143,6477594,6480714,6499852,6621454,6642994	6406689,6409370,6414883,6431586,6436162,6439096,6442156,6445547,6455252,6477631,6480876,6499929,6621691,6648504	Gene ID= ENSG00000147316.12 TPM= 3.19 Transcript Type= protein_coding
chr8	6406613	6643623	6406613	6643623	+	transcript120.chr8.nnic@MCPH1	transcript120.chr8.nnic	protein_coding	6406613,6409279,6414765,6431499,6436048,6438953,6442067,6455143,6477594,6480714,6499852,6621454,6642994	6406689,6409370,6414883,6431586,6436162,6439096,6442156,6455252,6477631,6480876,6499929,6621691,6643623	Gene ID= ENSG00000147316.12 TPM= 3.19 Transcript Type= NA
chr8	6423192	6426348	6423192	6426348	-	transcript125.chr8.nnic@NA	transcript125.chr8.nnic	NA	6423192	6426348	Gene ID= novel_gene_chr8_126 TPM= 2.12 Transcript Type= NA
chr8	6708357	6759666	6708357	6759666	+	ENST00000285518.10@AGPAT5	ENST00000285518.10	protein_coding	6708357,6724870,6730711,6732561,6741661,6747670,6755051,6757163	6708887,6724939,6730826,6732650,6741751,6747828,6755174,6759666	Gene ID= ENSG00000155189.11 TPM= 13.81 Transcript Type= protein_coding
chr8	6977650	6980080	6977650	6980080	-	ENST00000382692.2@DEFA1	ENST00000382692.2	protein_coding	6980013,6978460,6977650	6980080,6978646,6977879	Gene ID= ENSG00000206047.2 TPM= 21.24 Transcript Type= protein_coding
chr8	6996766	6999195	6996766	6999195	-	ENST00000382689.7@DEFA1B	ENST00000382689.7	protein_coding	6999123,6997577,6996766	6999195,6997763,6996996	Gene ID= ENSG00000240247.7 TPM= 15.93 Transcript Type= protein_coding
chr8	7015869	7018301	7015869	7018301	-	ENST00000327857.6@DEFA3	ENST00000327857.6	protein_coding	7018222,7016676,7015869	7018301,7016862,7016099	Gene ID= ENSG00000239839.6 TPM= 10.62 Transcript Type= protein_coding
chr8	7352424	7355346	7352424	7355346	-	transcript144.chr8.nnic@NA	transcript144.chr8.nnic	NA	7352424	7355346	Gene ID= novel_gene_chr8_145 TPM= 4.25 Transcript Type= NA
chr8	8701938	8704106	8701938	8704106	+	ENST00000519106.1@CLDN23	ENST00000519106.1	protein_coding	8701938	8704106	Gene ID= ENSG00000253958.1 TPM= 3.19 Transcript Type= protein_coding
chr8	9094909	9121821	9094909	9121821	+	transcript151.chr8.nnic@ERI1	transcript151.chr8.nnic	protein_coding	9094909,9110388,9116339,9118345,9120847	9097645,9110824,9116408,9118489,9121821	Gene ID= ENSG00000104626.14 TPM= 2.12 Transcript Type= NA
chr8	9136255	9150696	9136255	9150696	-	ENST00000310455.3@PPP1R3B	ENST00000310455.3	protein_coding	9150563,9136255	9150696,9141668	Gene ID= ENSG00000173281.4 TPM= 52.05 Transcript Type= protein_coding
chr8	9151803	9156354	9151803	9156354	+	ENST00000521718.1@AC022784.3	ENST00000521718.1	lincRNA	9151803,9154966,9156152	9151916,9155076,9156354	Gene ID= ENSG00000253426.5 TPM= 1.06 Transcript Type= lincRNA
chr8	9555900	9710040	9555900	9710040	+	transcript163.chr8.nic@TNKS	transcript163.chr8.nic	protein_coding	9555900,9580159,9615582,9679951,9680725,9704663,9706187,9706811,9708371,9709955	9556612,9580383,9615677,9679987,9680800,9704757,9706253,9706997,9708492,9710040	Gene ID= ENSG00000173273.15 TPM= 2.12 Transcript Type= NA
chr8	9555900	9688434	9555900	9688434	+	transcript164.chr8.nnic@TNKS	transcript164.chr8.nnic	protein_coding	9555900,9580159,9615582,9679951,9680725,9686381,9687502	9556612,9580383,9615677,9679987,9680800,9686440,9688434	Gene ID= ENSG00000173273.15 TPM= 2.12 Transcript Type= NA
chr8	10054268	10428891	10054268	10428891	+	ENST00000317173.8@MSRA	ENST00000317173.8	protein_coding	10054268,10207833,10245104,10301534,10319883,10428148	10054658,10207901,10245223,10301638,10319989,10428891	Gene ID= ENSG00000175806.14 TPM= 21.24 Transcript Type= protein_coding
chr8	10389742	10391216	10389742	10391216	-	transcript175.chr8.nnic@NA	transcript175.chr8.nnic	NA	10389742	10391216	Gene ID= novel_gene_chr8_176 TPM= 2.12 Transcript Type= NA
chr8	10723867	10726418	10723867	10726418	-	transcript179.chr8.nnic@NA	transcript179.chr8.nnic	NA	10723867	10726418	Gene ID= novel_gene_chr8_180 TPM= 3.19 Transcript Type= NA
chr8	10764963	10839876	10764963	10839876	-	ENST00000314787.7@PINX1	ENST00000314787.7	protein_coding	10839738,10834666,10832892,10831665,10826152,10820193,10764963	10839876,10834775,10832984,10831743,10826244,10820269,10765916	Gene ID= ENSG00000254093.8 TPM= 2.12 Transcript Type= protein_coding
chr8	10765159	10839876	10765159	10839876	-	ENST00000519088.5@PINX1	ENST00000519088.5	protein_coding	10839738,10834666,10832892,10831665,10826152,10765159	10839876,10834775,10832984,10831743,10826244,10765916	Gene ID= ENSG00000254093.8 TPM= 1.06 Transcript Type= protein_coding
chr8	11200126	11203660	11200126	11203660	+	transcript184.chr8.nnic@NA	transcript184.chr8.nnic	NA	11200126	11203660	Gene ID= novel_gene_chr8_185 TPM= 2.12 Transcript Type= NA
chr8	11284416	11328146	11284416	11328146	+	ENST00000221086.7@MTMR9	ENST00000221086.7	protein_coding	11284416,11295194,11300023,11304841,11306190,11309527,11314923,11316673,11319687,11322625	11285070,11295302,11300148,11305014,11306407,11309688,11315064,11316893,11319838,11328146	Gene ID= ENSG00000104643.9 TPM= 4.25 Transcript Type= protein_coding
chr8	11284451	11300604	11284451	11300604	+	transcript193.chr8.nic@MTMR9	transcript193.chr8.nic	protein_coding	11284451,11295194,11300023	11285070,11295302,11300604	Gene ID= ENSG00000104643.9 TPM= 2.12 Transcript Type= NA
chr8	11284827	11324527	11284827	11324527	+	ENST00000530200.1@MTMR9	ENST00000530200.1	protein_coding	11284827,11295194,11297900,11300023,11304841,11306190,11309527,11314923,11316673,11319687,11322625	11285070,11295302,11297951,11300148,11305014,11306407,11309688,11315064,11316893,11319838,11324527	Gene ID= ENSG00000104643.9 TPM= 6.37 Transcript Type= nonsense_mediated_decay
chr8	11676935	11760000	11676935	11760000	+	transcript205.chr8.nnic@GATA4	transcript205.chr8.nnic	protein_coding	11676935,11700508,11707856,11748919,11750111,11755046,11756935,11758293	11677063,11700778,11708928,11749085,11750236,11755133,11757083,11760000	Gene ID= ENSG00000136574.17 TPM= 11.76 Transcript Type= NA
chr8	11704202	11760000	11704202	11760000	+	transcript208.chr8.nic@GATA4	transcript208.chr8.nic	protein_coding	11704202,11705914,11707856,11748919,11750111,11755046,11756935,11758293	11704304,11706033,11708928,11749085,11750236,11755133,11757083,11760000	Gene ID= ENSG00000136574.17 TPM= 12.82 Transcript Type= NA
chr8	11704008	11750796	11704008	11750796	+	transcript222.chr8.nic@GATA4	transcript222.chr8.nic	protein_coding	11704008,11707856,11748919,11750111	11704304,11708928,11749085,11750796	Gene ID= ENSG00000136574.17 TPM= 8.23 Transcript Type= NA
chr8	11703950	11710541	11703950	11710541	+	transcript231.chr8.nic@GATA4	transcript231.chr8.nic	protein_coding	11703950,11707856	11704304,11710541	Gene ID= ENSG00000136574.17 TPM= 15.14 Transcript Type= NA
chr8	11704177	11710714	11704177	11710714	+	transcript232.chr8.nic@GATA4	transcript232.chr8.nic	protein_coding	11704177,11707856	11704304,11710714	Gene ID= ENSG00000136574.17 TPM= 6.64 Transcript Type= NA
chr8	11704204	11760002	11704204	11760002	+	ENST00000335135.8@GATA4	ENST00000335135.8	protein_coding	11704204,11707856,11748919,11750111,11755046,11756935,11758293	11704304,11708928,11749085,11750236,11755133,11757083,11760002	Gene ID= ENSG00000136574.17 TPM= 199.34 Transcript Type= protein_coding
chr8	11678562	11678978	11678562	11678978	+	transcript242.chr8.nnic@NA	transcript242.chr8.nnic	NA	11678562	11678978	Gene ID= novel_gene_chr8_243 TPM= 2.12 Transcript Type= NA
chr8	11679241	11682020	11679241	11682020	+	transcript244.chr8.nnic@NA	transcript244.chr8.nnic	NA	11679241	11682020	Gene ID= novel_gene_chr8_245 TPM= 7.44 Transcript Type= NA
chr8	11693464	11695414	11693464	11695414	+	transcript234.chr8.nnic@NA	transcript234.chr8.nnic	NA	11693464	11695414	Gene ID= novel_gene_chr8_235 TPM= 2.12 Transcript Type= NA
chr8	11704060	11706661	11704060	11706661	+	transcript246.chr8.nnic@NA	transcript246.chr8.nnic	NA	11704060	11706661	Gene ID= novel_gene_chr8_247 TPM= 2.12 Transcript Type= NA
chr8	11753082	11755921	11753082	11755921	+	transcript236.chr8.nnic@NA	transcript236.chr8.nnic	NA	11753082	11755921	Gene ID= novel_gene_chr8_237 TPM= 4.25 Transcript Type= NA
chr8	11758545	11763223	11758545	11763223	+	transcript238.chr8.nnic@NA	transcript238.chr8.nnic	NA	11758545	11763223	Gene ID= novel_gene_chr8_239 TPM= 6.37 Transcript Type= NA
chr8	11761256	11763223	11761256	11763223	+	ENST00000525043.4@C8orf49	ENST00000525043.4	lincRNA	11761256	11763223	Gene ID= ENSG00000255394.4 TPM= 6.37 Transcript Type= lincRNA
chr8	11769639	11787345	11769639	11787345	+	ENST00000436750.7@NEIL2	ENST00000436750.7	protein_coding	11769639,11771446,11779598,11783203,11785963	11769791,11771585,11779950,11783399,11787345	Gene ID= ENSG00000154328.15 TPM= 35.83 Transcript Type= protein_coding
chr8	11769719	11787345	11769719	11787345	+	transcript256.chr8.nnic@NEIL2	transcript256.chr8.nnic	protein_coding	11769719,11771446,11779598,11783203,11785963	11769791,11771585,11780522,11783399,11787345	Gene ID= ENSG00000154328.15 TPM= 3.19 Transcript Type= NA
chr8	11769715	11787345	11769715	11787345	+	transcript260.chr8.nnic@NEIL2	transcript260.chr8.nnic	protein_coding	11769715,11779598,11783203,11785963	11770335,11779950,11783399,11787345	Gene ID= ENSG00000154328.15 TPM= 3.61 Transcript Type= NA
chr8	11769709	11787345	11769709	11787345	+	ENST00000403422.7@NEIL2	ENST00000403422.7	protein_coding	11769709,11779598,11783203,11785963	11769791,11779950,11783399,11787345	Gene ID= ENSG00000154328.15 TPM= 5.74 Transcript Type= protein_coding
chr8	11769699	11787340	11769699	11787340	+	ENST00000455213.6@NEIL2	ENST00000455213.6	protein_coding	11769699,11770174,11771446,11779598,11783203,11785963	11769791,11770335,11771585,11779950,11783399,11787340	Gene ID= ENSG00000154328.15 TPM= 15.11 Transcript Type= protein_coding
chr8	11769739	11787346	11769739	11787346	+	ENST00000284503.6@NEIL2	ENST00000284503.6	protein_coding	11769739,11771446,11779598,11783203,11785963	11770335,11771585,11779950,11783399,11787346	Gene ID= ENSG00000154328.15 TPM= 40.61 Transcript Type= protein_coding
chr8	11802611	11839309	11802611	11839309	+	ENST00000220584.8@FDFT1	ENST00000220584.8	protein_coding	11802611,11808794,11809667,11821750,11826024,11830244,11831518,11838388	11802931,11808891,11809850,11821878,11826215,11830420,11831670,11839309	Gene ID= ENSG00000079459.12 TPM= 41.77 Transcript Type= protein_coding
chr8	11803012	11838960	11803012	11838960	+	ENST00000528812.5@FDFT1	ENST00000528812.5	protein_coding	11803012,11808794,11809667,11821750,11826024,11830244,11831518,11838388	11803518,11808891,11809850,11821878,11826215,11830420,11831670,11838960	Gene ID= ENSG00000079459.12 TPM= 3.54 Transcript Type= protein_coding
chr8	11808417	11838967	11808417	11838967	+	ENST00000525954.5@FDFT1	ENST00000525954.5	protein_coding	11808417,11809667,11821750,11826024,11830244,11831518,11838388	11808891,11809850,11821878,11826215,11830420,11831670,11838967	Gene ID= ENSG00000079459.12 TPM= 21.59 Transcript Type= protein_coding
chr8	11842524	11868229	11842524	11868229	-	ENST00000353047.10@CTSB	ENST00000353047.10	protein_coding	11868001,11853329,11852610,11850866,11849046,11848067,11847679,11847052,11845661,11842524	11868229,11853479,11852695,11850980,11849164,11848152,11847822,11847168,11845789,11845222	Gene ID= ENSG00000164733.20 TPM= 35.91 Transcript Type= protein_coding
chr8	11844053	11868112	11844053	11868112	-	ENST00000530640.6@CTSB	ENST00000530640.6	protein_coding	11868001,11853329,11852610,11850866,11849046,11848067,11847679,11847052,11845661,11845082,11844053	11868112,11853479,11852695,11850980,11849164,11848152,11847822,11847168,11845789,11845222,11844241	Gene ID= ENSG00000164733.20 TPM= 7.42 Transcript Type= protein_coding
chr8	11844355	11868106	11844355	11868106	-	ENST00000533455.5@CTSB	ENST00000533455.5	protein_coding	11868001,11864376,11853329,11852610,11850866,11849046,11848067,11847679,11847052,11845661,11844355	11868106,11864463,11853479,11852695,11850980,11849164,11848152,11847822,11847168,11845789,11845222	Gene ID= ENSG00000164733.20 TPM= 242.36 Transcript Type= protein_coding
chr8	11844320	11868087	11844320	11868087	-	ENST00000453527.6@CTSB	ENST00000453527.6	protein_coding	11868001,11861406,11853329,11852610,11850866,11849046,11848067,11847679,11847052,11845661,11844320	11868087,11861479,11853479,11852695,11850980,11849164,11848152,11847822,11847168,11845789,11845222	Gene ID= ENSG00000164733.20 TPM= 132.38 Transcript Type= protein_coding
chr8	11844340	11868079	11844340	11868079	-	ENST00000345125.7@CTSB	ENST00000345125.7	protein_coding	11868001,11861361,11853329,11852610,11850866,11849046,11848067,11847679,11847052,11845661,11844340	11868079,11861479,11853479,11852695,11850980,11849164,11848152,11847822,11847168,11845789,11845222	Gene ID= ENSG00000164733.20 TPM= 1.37 Transcript Type= protein_coding
chr8	11844370	11868106	11844370	11868106	-	ENST00000534510.5@CTSB	ENST00000534510.5	protein_coding	11868001,11857858,11853329,11852610,11850866,11849046,11848067,11847679,11847052,11845661,11844370	11868106,11857940,11853479,11852695,11850980,11849164,11848152,11847822,11847168,11845789,11845222	Gene ID= ENSG00000164733.20 TPM= 2.32 Transcript Type= protein_coding
chr8	11864626	11865866	11864626	11865866	+	transcript362.chr8.nnic@NA	transcript362.chr8.nnic	NA	11864626	11865866	Gene ID= novel_gene_chr8_363 TPM= 12.75 Transcript Type= NA
chr8	12696792	12755282	12696792	12755282	-	transcript379.chr8.nnic@LONRF1	transcript379.chr8.nnic	protein_coding	12754700,12743164,12740874,12737995,12736900,12736701,12735286,12731736,12729174,12728901,12725727,12696792	12755282,12743282,12740996,12738144,12737140,12736797,12735400,12731857,12729332,12729063,12725879,12697179	Gene ID= ENSG00000154359.12 TPM= 2.12 Transcript Type= NA
chr8	12721906	12755512	12721906	12755512	-	transcript380.chr8.nic@LONRF1	transcript380.chr8.nic	protein_coding	12754700,12743164,12740874,12737995,12736900,12736701,12735286,12731736,12729174,12728901,12725727,12721906	12755512,12743282,12740996,12738144,12737140,12736764,12735400,12731857,12729332,12729063,12725879,12723254	Gene ID= ENSG00000154359.12 TPM= 13.28 Transcript Type= NA
chr8	12721894	12755490	12721894	12755490	-	ENST00000398246.7@LONRF1	ENST00000398246.7	protein_coding	12754700,12743164,12740874,12737995,12736900,12736701,12735286,12731736,12729174,12728901,12725727,12721894	12755490,12743282,12740996,12738144,12737140,12736797,12735400,12731857,12729332,12729063,12725879,12723254	Gene ID= ENSG00000154359.12 TPM= 12.21 Transcript Type= protein_coding
chr8	12951650	13024035	12951650	13024035	+	transcript389.chr8.nic@KIAA1456	transcript389.chr8.nic	protein_coding	12951650,12990834,13006202,13012684,13021008	12952358,12991031,13006356,13012857,13024035	Gene ID= ENSG00000250305.8 TPM= 2.12 Transcript Type= NA
chr8	12951913	13007671	12951913	13007671	+	transcript394.chr8.nnic@KIAA1456	transcript394.chr8.nnic	protein_coding	12951913,12990834,13006202,13006386	12952358,12991000,13006356,13007671	Gene ID= ENSG00000250305.8 TPM= 2.12 Transcript Type= NA
chr8	12951909	12992714	12951909	12992714	+	transcript404.chr8.nic@KIAA1456	transcript404.chr8.nic	protein_coding	12951909,12990834	12952358,12992714	Gene ID= ENSG00000250305.8 TPM= 2.12 Transcript Type= NA
chr8	13083361	13514886	13083361	13514886	-	ENST00000276297.8@DLC1	ENST00000276297.8	protein_coding	13514602,13499049,13401470,13393553,13305269,13115586,13110742,13102790,13099347,13098399,13095086,13094759,13092612,13091318,13090252,13088487,13086290,13083361	13514886,13500196,13401619,13393693,13305302,13115657,13110823,13102853,13100770,13098575,13095245,13094957,13092825,13091432,13090470,13088704,13086463,13085931	Gene ID= ENSG00000164741.14 TPM= 17.53 Transcript Type= protein_coding
chr8	13085189	13133474	13085189	13133474	-	ENST00000358919.6@DLC1	ENST00000358919.6	protein_coding	13132944,13115586,13110742,13102790,13099347,13098399,13095086,13094759,13092612,13091318,13090252,13088487,13086290,13085189	13133474,13115657,13110823,13102853,13100770,13098575,13095245,13094957,13092825,13091432,13090470,13088704,13086463,13085931	Gene ID= ENSG00000164741.14 TPM= 7.97 Transcript Type= protein_coding
chr8	13222930	13226000	13222930	13226000	-	transcript415.chr8.nnic@NA	transcript415.chr8.nnic	NA	13222930	13226000	Gene ID= novel_gene_chr8_416 TPM= 2.12 Transcript Type= NA
chr8	13241007	13243314	13241007	13243314	+	transcript413.chr8.nnic@NA	transcript413.chr8.nnic	NA	13241007	13243314	Gene ID= novel_gene_chr8_414 TPM= 8.5 Transcript Type= NA
chr8	13293406	13297294	13293406	13297294	+	transcript411.chr8.nnic@NA	transcript411.chr8.nnic	NA	13293406	13297294	Gene ID= novel_gene_chr8_412 TPM= 5.31 Transcript Type= NA
chr8	13566843	13568287	13566843	13568287	+	ENST00000297324.4@C8orf48	ENST00000297324.4	protein_coding	13566843	13568287	Gene ID= ENSG00000164743.4 TPM= 3.19 Transcript Type= protein_coding
chr8	15540223	15766649	15540223	15766649	+	ENST00000382020.8@TUSC3	ENST00000382020.8	protein_coding	15540223,15623080,15650697,15659507,15662156,15673747,15730666,15743538,15748375,15764203	15540568,15623249,15650814,15659647,15662296,15673836,15730729,15743612,15748465,15766649	Gene ID= ENSG00000104723.20 TPM= 24.43 Transcript Type= protein_coding
chr8	15540227	15764661	15540227	15764661	+	ENST00000515859.5@TUSC3	ENST00000515859.5	protein_coding	15540227,15623080,15650697,15659507,15662156,15673747,15743538,15748375,15764203	15540568,15623249,15650814,15659647,15662296,15673836,15743612,15748465,15764661	Gene ID= ENSG00000104723.20 TPM= 2.12 Transcript Type= nonsense_mediated_decay
chr8	15540283	15764459	15540283	15764459	+	ENST00000503731.5@TUSC3	ENST00000503731.5	protein_coding	15540283,15623080,15650697,15659507,15662156,15673747,15730666,15743538,15748375,15757791,15764203	15540568,15623249,15650814,15659647,15662296,15673836,15730729,15743612,15748465,15757855,15764459	Gene ID= ENSG00000104723.20 TPM= 9.56 Transcript Type= protein_coding
chr8	17026854	17028220	17026854	17028220	+	transcript440.chr8.nnic@NA	transcript440.chr8.nnic	NA	17026854	17028220	Gene ID= novel_gene_chr8_441 TPM= 2.12 Transcript Type= NA
chr8	17027238	17122644	17027238	17122644	+	ENST00000318063.9@MICU3	ENST00000318063.9	protein_coding	17027238,17064084,17069688,17077783,17081693,17085236,17086964,17090546,17098458,17104391,17105413,17114093,17116443,17118707,17120288	17027660,17064237,17069719,17077861,17081740,17085318,17087035,17090584,17098553,17104491,17105584,17114201,17116600,17118775,17122644	Gene ID= ENSG00000155970.11 TPM= 1.06 Transcript Type= protein_coding
chr8	17027261	17120648	17027261	17120648	+	transcript433.chr8.nnic@MICU3	transcript433.chr8.nnic	protein_coding	17027261,17064084,17069688,17077783,17081693,17085236,17086964,17090546,17104391,17105413,17114093,17116443,17118707,17120288	17027660,17064237,17069719,17077861,17081740,17085318,17087035,17090584,17104491,17105584,17114201,17116600,17118775,17120648	Gene ID= ENSG00000155970.11 TPM= 2.12 Transcript Type= NA
chr8	17224964	17246878	17224964	17246878	-	ENST00000361272.8@CNOT7	ENST00000361272.8	protein_coding	17246675,17245036,17242992,17237212,17234716,17232427,17224964	17246878,17245247,17243185,17237373,17234860,17232537,17230848	Gene ID= ENSG00000198791.11 TPM= 25.49 Transcript Type= protein_coding
chr8	17231570	17246878	17231570	17246878	-	ENST00000523917.5@CNOT7	ENST00000523917.5	protein_coding	17246675,17245036,17242992,17237212,17234716,17231570	17246878,17245247,17243185,17237373,17234860,17232537	Gene ID= ENSG00000198791.11 TPM= 1.06 Transcript Type= protein_coding
chr8	17246906	17295559	17246906	17295559	+	transcript466.chr8.nic@VPS37A	transcript466.chr8.nic	protein_coding	17246906,17265771,17265907,17268258,17268856,17274733,17276397,17280028,17280239,17280375,17284473,17286347,17294987	17247369,17265815,17265981,17268372,17268956,17274958,17276467,17280155,17280297,17280443,17284616,17286427,17295559	Gene ID= ENSG00000155975.9 TPM= 16.81 Transcript Type= NA
chr8	17246983	17295559	17246983	17295559	+	transcript471.chr8.nnic@VPS37A	transcript471.chr8.nnic	protein_coding	17246983,17265907,17268258,17268856,17274733,17276397,17280028,17280239,17280375,17284473,17286347,17294139	17247369,17265981,17268372,17268956,17274958,17276467,17280155,17280297,17280443,17284616,17286427,17295559	Gene ID= ENSG00000155975.9 TPM= 4.25 Transcript Type= NA
chr8	17246571	17298024	17246571	17298024	+	ENST00000324849.8@VPS37A	ENST00000324849.8	protein_coding	17246571,17265907,17268258,17268856,17274733,17276397,17280028,17280239,17280375,17284473,17286347,17294987	17247369,17265981,17268372,17268956,17274958,17276467,17280155,17280297,17280443,17284616,17286427,17298024	Gene ID= ENSG00000155975.9 TPM= 32.93 Transcript Type= protein_coding
chr8	17246905	17286611	17246905	17286611	+	transcript483.chr8.nic@VPS37A	transcript483.chr8.nic	protein_coding	17246905,17265907,17268258,17268856,17274733,17276397,17280028,17280239,17280375,17284473,17286347	17247369,17265981,17268372,17268956,17274958,17276467,17280155,17280297,17280443,17284616,17286611	Gene ID= ENSG00000155975.9 TPM= 6.37 Transcript Type= NA
chr8	17577186	17643133	17577186	17643133	+	transcript499.chr8.nic@PDGFRL	transcript499.chr8.nic	protein_coding	17577186,17589468,17621051,17628487,17634074,17642613	17577307,17589765,17621202,17628780,17634213,17643133	Gene ID= ENSG00000104213.12 TPM= 11.68 Transcript Type= NA
chr8	17653212	17800887	17653212	17800887	-	transcript507.chr8.nic@MTUS1	transcript507.chr8.nic	protein_coding	17800598,17753717,17743604,17723672,17715767,17713214,17684328,17675186,17655863,17654561,17653425,17653212	17800887,17755961,17743799,17723833,17715901,17713252,17684542,17675252,17656065,17654666,17653498,17653281	Gene ID= ENSG00000129422.14 TPM= 5.23 Transcript Type= NA
chr8	17653212	17801522	17653212	17801522	-	transcript508.chr8.nnic@MTUS1	transcript508.chr8.nnic	protein_coding	17801061,17753717,17743604,17723672,17715767,17713214,17684328,17675186,17655863,17654561,17653425,17653212	17801522,17755961,17743799,17723833,17715901,17713252,17684542,17675252,17656065,17654666,17653498,17653281	Gene ID= ENSG00000129422.14 TPM= 15.32 Transcript Type= NA
chr8	17653212	17801522	17653212	17801522	-	transcript510.chr8.nnic@MTUS1	transcript510.chr8.nnic	protein_coding	17801061,17753717,17743604,17715767,17713214,17684328,17675186,17655863,17654561,17653425,17653212	17801522,17755961,17743799,17715901,17713252,17684542,17675252,17656065,17654666,17653498,17653281	Gene ID= ENSG00000129422.14 TPM= 12.13 Transcript Type= NA
chr8	17643799	17697670	17643799	17697670	-	ENST00000297488.10@MTUS1	ENST00000297488.10	protein_coding	17697257,17684328,17675186,17655863,17654561,17653425,17653186,17649846,17646982,17643799	17697670,17684542,17675252,17656065,17654666,17653498,17653281,17649962,17647079,17646139	Gene ID= ENSG00000129422.14 TPM= 31.6 Transcript Type= protein_coding
chr8	17645926	17676493	17645926	17676493	-	ENST00000634613.1@MTUS1	ENST00000634613.1	protein_coding	17676276,17675186,17655863,17654561,17653425,17653186,17649846,17646982,17645926	17676493,17675252,17656065,17654666,17653498,17653281,17649962,17647079,17646139	Gene ID= ENSG00000129422.14 TPM= 1.59 Transcript Type= protein_coding
chr8	17799019	17801238	17799019	17801238	-	transcript519.chr8.nnic@NA	transcript519.chr8.nnic	NA	17799019	17801238	Gene ID= novel_gene_chr8_520 TPM= 2.12 Transcript Type= NA
chr8	17922901	18027758	17922901	18027758	+	transcript521.chr8.nnic@PCM1	transcript521.chr8.nnic	protein_coding	17922901,17924713,17934706,17935134,17935589,17937134,17938740,17939691,17947186,17950615,17952970,17955470,17956604,17957264,17957540,17960014,17960315,17962034,17963101,17964568,17965999,17966328,17966980,17969577,17972329,17980591,17983233,17985447,17985959,17989859,17991542,17993483,18006263,18009547,18010609,18011237,18011667,18013964,18014584,18025361,18025544,18027637	17923188,17924780,17934858,17935317,17935706,17937379,17939009,17939861,17947363,17950724,17953186,17955653,17956777,17957421,17957775,17960165,17960444,17962174,17963291,17964768,17966218,17966473,17967170,17969748,17972687,17980755,17983289,17985619,17986087,17989979,17991676,17993619,18006397,18009744,18010668,18011366,18011827,18014036,18014840,18025453,18025658,18027758	Gene ID= ENSG00000078674.17 TPM= 7.44 Transcript Type= NA
chr8	18056459	18083408	18056459	18083408	-	ENST00000636691.1@ASAH1	ENST00000636691.1	protein_coding	18083122,18075541,18071300,18069792,18067220,18064457,18063185,18062279,18061686,18061377,18059572,18059341,18058835,18056459	18083408,18075587,18071390,18069878,18067298,18064531,18063230,18062423,18061740,18061458,18059703,18059464,18058891,18057623	Gene ID= ENSG00000104763.18 TPM= 32.4 Transcript Type= protein_coding
chr8	18056880	18084074	18056880	18084074	-	ENST00000636033.1@ASAH1	ENST00000636033.1	protein_coding	18083899,18075541,18071300,18069792,18067220,18064457,18063185,18062279,18061686,18061377,18059572,18059341,18058835,18056880	18084074,18075587,18071390,18069878,18067298,18064531,18063230,18062423,18061740,18061458,18059703,18059464,18058891,18057623	Gene ID= ENSG00000104763.18 TPM= 1.06 Transcript Type= nonsense_mediated_decay
chr8	18066763	18084206	18066763	18084206	-	transcript592.chr8.nnic@ASAH1	transcript592.chr8.nnic	protein_coding	18083981,18075541,18071300,18069792,18067134,18066763	18084206,18075587,18071390,18069878,18067298,18067104	Gene ID= ENSG00000104763.18 TPM= 292.63 Transcript Type= NA
chr8	18066763	18084073	18066763	18084073	-	ENST00000518087.7@ASAH1	ENST00000518087.7	protein_coding	18083917,18075541,18071300,18069792,18066763	18084073,18075587,18071390,18069878,18067298	Gene ID= ENSG00000104763.18 TPM= 3.19 Transcript Type= nonsense_mediated_decay
chr8	18056452	18084108	18056452	18084108	-	ENST00000520781.6@ASAH1	ENST00000520781.6	protein_coding	18083981,18075541,18071300,18069792,18067220,18063185,18062279,18061686,18061377,18059572,18059341,18058835,18056452	18084108,18075587,18071390,18069878,18067298,18063230,18062423,18061740,18061458,18059703,18059464,18058891,18057623	Gene ID= ENSG00000104763.18 TPM= 36.64 Transcript Type= protein_coding
chr8	18056462	18076037	18056462	18076037	-	ENST00000637922.1@ASAH1	ENST00000637922.1	protein_coding	18075923,18075541,18071300,18069792,18067220,18064457,18063185,18062279,18061686,18061377,18059572,18059341,18058835,18056462	18076037,18075587,18071390,18069878,18067298,18064531,18063230,18062423,18061740,18061458,18059703,18059464,18058891,18057623	Gene ID= ENSG00000104763.18 TPM= 23.02 Transcript Type= protein_coding
chr8	18056466	18084142	18056466	18084142	-	ENST00000636171.1@ASAH1	ENST00000636171.1	protein_coding	18083981,18075541,18071300,18069792,18067220,18064457,18063185,18062279,18061686,18061377,18059572,18059341,18058835,18056466	18084142,18075587,18071390,18069878,18067298,18064474,18063230,18062423,18061740,18061458,18059703,18059464,18058891,18057623	Gene ID= ENSG00000104763.18 TPM= 3.72 Transcript Type= protein_coding
chr8	18066763	18084148	18066763	18084148	-	ENST00000637561.1@ASAH1	ENST00000637561.1	protein_coding	18083981,18075541,18071300,18069792,18066763	18084148,18075587,18071390,18069878,18067298	Gene ID= ENSG00000104763.18 TPM= 225.18 Transcript Type= protein_coding
chr8	18095051	18095279	18095051	18095279	+	transcript616.chr8.nnic@NA	transcript616.chr8.nnic	NA	18095051	18095279	Gene ID= novel_gene_chr8_617 TPM= 2.12 Transcript Type= NA
chr8	18710395	18714439	18710395	18714439	+	transcript626.chr8.nnic@NA	transcript626.chr8.nnic	NA	18710395	18714439	Gene ID= novel_gene_chr8_627 TPM= 3.19 Transcript Type= NA
chr8	18790076	18793380	18790076	18793380	+	transcript628.chr8.nnic@NA	transcript628.chr8.nnic	NA	18790076	18793380	Gene ID= novel_gene_chr8_629 TPM= 3.19 Transcript Type= NA
chr8	18845472	18848140	18845472	18848140	+	transcript630.chr8.nnic@NA	transcript630.chr8.nnic	NA	18845472	18848140	Gene ID= novel_gene_chr8_631 TPM= 2.12 Transcript Type= NA
chr8	19313976	19394953	19313976	19394953	+	ENST00000519207.5@SH2D4A	ENST00000519207.5	protein_coding	19313976,19319344,19332955,19334686,19357203,19361203,19364072,19373530,19393318,19394550	19314079,19319728,19333114,19334857,19357283,19361314,19364282,19373660,19393541,19394953	Gene ID= ENSG00000104611.11 TPM= 1.06 Transcript Type= protein_coding
chr8	19404161	19682792	19404161	19682792	-	transcript638.chr8.nic@CSGALNACT1	transcript638.chr8.nic	protein_coding	19682696,19601771,19585166,19505201,19458426,19439830,19420340,19418656,19408613,19404161	19682792,19601865,19585317,19506130,19458642,19439931,19420518,19418750,19408694,19406069	Gene ID= ENSG00000147408.14 TPM= 3.72 Transcript Type= NA
chr8	19404161	19682982	19404161	19682982	-	transcript643.chr8.nic@CSGALNACT1	transcript643.chr8.nic	protein_coding	19682696,19601771,19505201,19458426,19439830,19420340,19418656,19408613,19404161	19682982,19601865,19506130,19458642,19439931,19420518,19418750,19408694,19406069	Gene ID= ENSG00000147408.14 TPM= 15.93 Transcript Type= NA
chr8	19404161	19757304	19404161	19757304	-	transcript645.chr8.nic@CSGALNACT1	transcript645.chr8.nic	protein_coding	19757186,19601771,19505201,19458426,19439830,19420340,19418656,19408613,19404161	19757304,19601865,19506130,19458642,19439931,19420518,19418750,19408694,19406069	Gene ID= ENSG00000147408.14 TPM= 8.5 Transcript Type= NA
chr8	19817398	19852061	19817398	19852061	+	transcript648.chr8.nic@INTS10	transcript648.chr8.nic	protein_coding	19817398,19818275,19819573,19820379,19822439,19823301,19823873,19824803,19826426,19830406,19832028,19833169,19837052,19842848,19844076,19845704,19849162,19851649	19817666,19818342,19819676,19820518,19822520,19823441,19824044,19824972,19826559,19830559,19832110,19833321,19837160,19842927,19844238,19845797,19849239,19852061	Gene ID= ENSG00000104613.11 TPM= 4.6 Transcript Type= NA
chr8	19817140	19852078	19817140	19852078	+	ENST00000397977.7@INTS10	ENST00000397977.7	protein_coding	19817140,19818275,19819573,19820379,19822439,19823301,19823873,19824803,19826426,19830406,19832028,19833169,19837052,19842848,19844076,19845704,19851649	19817666,19818342,19819676,19820518,19822520,19823441,19824044,19824972,19826559,19830559,19832110,19833321,19837160,19842927,19844238,19845797,19852078	Gene ID= ENSG00000104613.11 TPM= 32.75 Transcript Type= protein_coding
chr8	19817447	19846283	19817447	19846283	+	transcript653.chr8.nic@INTS10	transcript653.chr8.nic	protein_coding	19817447,19818275,19819573,19820379,19822439,19823301,19823873,19824803,19826426,19830406,19832028,19833169,19837052,19842848,19844076,19845704	19817666,19818342,19819676,19820518,19822520,19823441,19824044,19824972,19826559,19830559,19832110,19833321,19837160,19842927,19844238,19846283	Gene ID= ENSG00000104613.11 TPM= 2.12 Transcript Type= NA
chr8	19817440	19852067	19817440	19852067	+	transcript654.chr8.nic@INTS10	transcript654.chr8.nic	protein_coding	19817440,19818275,19819573,19822439,19823301,19823873,19824803,19826426,19830406,19832028,19833169,19837052,19842848,19844076,19845704,19851649	19817666,19818342,19819676,19822520,19823441,19824044,19824972,19826559,19830559,19832110,19833321,19837160,19842927,19844238,19845797,19852067	Gene ID= ENSG00000104613.11 TPM= 8.32 Transcript Type= NA
chr8	19817416	19846283	19817416	19846283	+	transcript657.chr8.nic@INTS10	transcript657.chr8.nic	protein_coding	19817416,19818194,19819573,19820379,19822439,19823301,19823873,19826426,19830406,19832028,19833169,19837052,19842848,19844076,19845704	19817666,19818342,19819676,19820518,19822520,19823441,19824044,19826559,19830559,19832110,19833321,19837160,19842927,19844238,19846283	Gene ID= ENSG00000104613.11 TPM= 2.12 Transcript Type= NA
chr8	19817396	19824065	19817396	19824065	+	transcript661.chr8.nic@INTS10	transcript661.chr8.nic	protein_coding	19817396,19818275,19819573,19820379,19822439,19823301,19823873	19817666,19818342,19819676,19820518,19822520,19823441,19824065	Gene ID= ENSG00000104613.11 TPM= 4.25 Transcript Type= NA
chr8	19938971	19967258	19938971	19967258	+	ENST00000311322.8@LPL	ENST00000311322.8	protein_coding	19938971,19948180,19951769,19953310,19954120,19955841,19959260,19960901,19962115,19965310	19939528,19948340,19951948,19953421,19954353,19956083,19959380,19961083,19962219,19967258	Gene ID= ENSG00000175445.14 TPM= 502.67 Transcript Type= protein_coding
chr8	19939208	19967259	19939208	19967259	+	transcript672.chr8.nnic@LPL	transcript672.chr8.nnic	protein_coding	19939208,19948180,19951769,19953310,19954120,19955841,19959260,19960901,19962115,19966525	19939528,19948340,19951948,19953421,19954353,19956083,19959380,19961083,19962219,19967259	Gene ID= ENSG00000175445.14 TPM= 16.2 Transcript Type= NA
chr8	20197367	20221701	20197367	20221701	+	ENST00000276390.6@ATP6V1B2	ENST00000276390.6	protein_coding	20197367,20204484,20209433,20210346,20210569,20211177,20211652,20212102,20212782,20214818,20216413,20217220,20218153,20220263	20197542,20204539,20209531,20210439,20210646,20211316,20211753,20212199,20212905,20214968,20216495,20217324,20218282,20221701	Gene ID= ENSG00000147416.10 TPM= 150.83 Transcript Type= protein_coding
chr8	21908873	21913860	21908873	21913860	-	ENST00000276420.8@DOK2	ENST00000276420.8	protein_coding	21913539,21912229,21911901,21910673,21908873	21913860,21912510,21911988,21910857,21909931	Gene ID= ENSG00000147443.12 TPM= 2.12 Transcript Type= protein_coding
chr8	21919671	22006585	21919671	22006585	+	ENST00000252512.13@XPO7	ENST00000252512.13	protein_coding	21919671,21966857,21969483,21970144,21971876,21974670,21976356,21977770,21980084,21981731,21982640,21984646,21985586,21987141,21987784,21989003,21990344,21990811,21991868,21994363,21995492,21998755,21999091,21999536,22002112,22003219,22003903,22004995	21919788,21967003,21969576,21970310,21971941,21974774,21976521,21977843,21980203,21981877,21982812,21984839,21985691,21987276,21987857,21989083,21990407,21990919,21991974,21994451,21995599,21998837,21999305,21999674,22002272,22003317,22004030,22006585	Gene ID= ENSG00000130227.16 TPM= 4.25 Transcript Type= protein_coding
chr8	22024125	22036863	22024125	22036863	+	ENST00000521157.5@NPM2	ENST00000521157.5	protein_coding	22024125,22024724,22025436,22025647,22033130,22034109,22034510,22036493,22036638	22024257,22025306,22025521,22025772,22033223,22034275,22034544,22036526,22036863	Gene ID= ENSG00000158806.13 TPM= 1.06 Transcript Type= protein_coding
chr8	22048947	22082524	22048947	22082524	+	transcript699.chr8.nic@DMTN	transcript699.chr8.nic	protein_coding	22048947,22066705,22067085,22067527,22069016,22069419,22069881,22070182,22072326,22073730,22080180,22080412,22080618,22080805,22081113,22081350	22049224,22066893,22067159,22067682,22069060,22069518,22069937,22070334,22072450,22073835,22080244,22080460,22080625,22080870,22081193,22082524	Gene ID= ENSG00000158856.18 TPM= 13.02 Transcript Type= NA
chr8	22048879	22082524	22048879	22082524	+	transcript700.chr8.nic@DMTN	transcript700.chr8.nic	protein_coding	22048879,22066838,22067085,22067527,22069016,22069419,22069881,22070182,22072326,22073730,22080180,22080412,22080795,22080802,22081113,22081350	22049224,22066893,22067159,22067682,22069060,22069518,22069937,22070334,22072450,22073835,22080244,22080460,22080799,22080870,22081193,22082524	Gene ID= ENSG00000158856.18 TPM= 8.06 Transcript Type= NA
chr8	22059175	22082524	22059175	22082524	+	ENST00000358242.5@DMTN	ENST00000358242.5	protein_coding	22059175,22066705,22067085,22067527,22069016,22069419,22069881,22070182,22072326,22073730,22080180,22080412,22080795,22080802,22081113,22081350	22059496,22066893,22067159,22067682,22069060,22069518,22069937,22070334,22072450,22073835,22080244,22080460,22080799,22080870,22081193,22082524	Gene ID= ENSG00000158856.18 TPM= 4.88 Transcript Type= protein_coding
chr8	22048872	22082524	22048872	22082524	+	transcript702.chr8.nic@DMTN	transcript702.chr8.nic	protein_coding	22048872,22066705,22067085,22067527,22069016,22069419,22069881,22070182,22072326,22073730,22080180,22080412,22080618,22081113,22081350	22049224,22066893,22067159,22067682,22069060,22069518,22069937,22070334,22072450,22073835,22080244,22080460,22080625,22081193,22082524	Gene ID= ENSG00000158856.18 TPM= 15.23 Transcript Type= NA
chr8	22048931	22082524	22048931	22082524	+	transcript703.chr8.nic@DMTN	transcript703.chr8.nic	protein_coding	22048931,22066705,22067527,22069016,22069419,22069881,22070182,22072326,22073730,22080180,22080412,22080618,22080805,22081113,22081350	22049224,22066893,22067682,22069060,22069518,22069937,22070334,22072450,22073835,22080244,22080460,22080625,22080870,22081193,22082524	Gene ID= ENSG00000158856.18 TPM= 18.33 Transcript Type= NA
chr8	22048879	22082524	22048879	22082524	+	transcript704.chr8.nic@DMTN	transcript704.chr8.nic	protein_coding	22048879,22066838,22067085,22067527,22069016,22069419,22069881,22070182,22072326,22073730,22080180,22080412,22080618,22081113,22081350	22049224,22066893,22067159,22067682,22069060,22069518,22069937,22070334,22072450,22073835,22080244,22080460,22080625,22081193,22082524	Gene ID= ENSG00000158856.18 TPM= 14.7 Transcript Type= NA
chr8	22066516	22082524	22066516	22082524	+	transcript708.chr8.nic@DMTN	transcript708.chr8.nic	protein_coding	22066516,22067085,22067527,22069016,22069419,22069881,22070182,22072326,22073730,22080180,22080412,22080618,22080805,22081113,22081350	22066893,22067159,22067682,22069060,22069518,22069937,22070334,22072450,22073835,22080244,22080460,22080625,22080870,22081193,22082524	Gene ID= ENSG00000158856.18 TPM= 9.3 Transcript Type= NA
chr8	22048928	22082524	22048928	22082524	+	transcript709.chr8.nic@DMTN	transcript709.chr8.nic	protein_coding	22048928,22066705,22067527,22069016,22069419,22069881,22070182,22072326,22073730,22080180,22080412,22080618,22081113,22081350	22049224,22066893,22067682,22069060,22069518,22069937,22070334,22072450,22073835,22080244,22080460,22080625,22081193,22082524	Gene ID= ENSG00000158856.18 TPM= 36.29 Transcript Type= NA
chr8	22049003	22082524	22049003	22082524	+	transcript711.chr8.nic@DMTN	transcript711.chr8.nic	protein_coding	22049003,22066705,22067527,22069419,22069881,22070182,22072326,22073730,22080180,22080412,22080618,22080805,22081113,22081350	22049224,22066893,22067682,22069518,22069937,22070334,22072450,22073835,22080244,22080460,22080625,22080870,22081193,22082524	Gene ID= ENSG00000158856.18 TPM= 8.06 Transcript Type= NA
chr8	22048879	22082524	22048879	22082524	+	transcript712.chr8.nic@DMTN	transcript712.chr8.nic	protein_coding	22048879,22066838,22067527,22069016,22069419,22069881,22070182,22072326,22073730,22080180,22080412,22080618,22081113,22081350	22049224,22066893,22067682,22069060,22069518,22069937,22070334,22072450,22073835,22080244,22080460,22080625,22081193,22082524	Gene ID= ENSG00000158856.18 TPM= 16.11 Transcript Type= NA
chr8	22048879	22082524	22048879	22082524	+	transcript713.chr8.nnic@DMTN	transcript713.chr8.nnic	protein_coding	22048879,22066838,22067527,22069016,22069419,22069881,22070182,22072326,22073730,22080180,22080412,22080805,22081113,22081350	22049224,22066893,22067682,22069060,22069518,22069937,22070334,22072450,22073835,22080244,22080460,22080870,22081193,22082524	Gene ID= ENSG00000158856.18 TPM= 11.25 Transcript Type= NA
chr8	22048872	22082524	22048872	22082524	+	transcript716.chr8.nic@DMTN	transcript716.chr8.nic	protein_coding	22048872,22066705,22067527,22069419,22069881,22070182,22072326,22073730,22080180,22080412,22080618,22081113,22081350	22049224,22066893,22067682,22069518,22069937,22070334,22072450,22073835,22080244,22080460,22080625,22081193,22082524	Gene ID= ENSG00000158856.18 TPM= 10.59 Transcript Type= NA
chr8	22059223	22082524	22059223	22082524	+	ENST00000519907.5@DMTN	ENST00000519907.5	protein_coding	22059223,22066705,22067085,22067527,22069016,22069419,22069881,22070182,22072326,22073730,22080180,22080412,22080618,22081113,22081350	22059496,22066893,22067159,22067682,22069060,22069518,22069937,22070334,22072450,22073835,22080244,22080460,22080625,22081193,22082524	Gene ID= ENSG00000158856.18 TPM= 8.33 Transcript Type= protein_coding
chr8	22101483	22104379	22101483	22104379	+	ENST00000496599.3@FAM160B2	ENST00000496599.3	protein_coding	22101483,22101708,22102528,22102793	22101530,22102315,22102628,22104379	Gene ID= ENSG00000158863.21 TPM= 43.55 Transcript Type= retained_intron
chr8	22089159	22097034	22089159	22097034	+	ENST00000498344.2@FAM160B2	ENST00000498344.2	protein_coding	22089159,22094440,22096337	22089298,22094518,22097034	Gene ID= ENSG00000158863.21 TPM= 3.19 Transcript Type= retained_intron
chr8	22093710	22096346	22093710	22096346	-	transcript743.chr8.nnic@NA	transcript743.chr8.nnic	NA	22093710	22096346	Gene ID= novel_gene_chr8_744 TPM= 24.43 Transcript Type= NA
chr8	22106874	22109419	22106874	22109419	-	ENST00000613958.1@NUDT18	ENST00000613958.1	protein_coding	22109139,22106874	22109419,22108346	Gene ID= ENSG00000275074.1 TPM= 6.37 Transcript Type= protein_coding
chr8	22106872	22109397	22106872	22109397	-	ENST00000611621.1@NUDT18	ENST00000611621.1	protein_coding	22109139,22108133,22106872	22109397,22108346,22107895	Gene ID= ENSG00000275074.1 TPM= 5.31 Transcript Type= protein_coding
chr8	22138020	22141951	22138020	22141951	-	ENST00000306306.7@REEP4	ENST00000306306.7	protein_coding	22141451,22140625,22140172,22139963,22139416,22138926,22138639,22138020	22141951,22140697,22140248,22140083,22139529,22139061,22138793,22138552	Gene ID= ENSG00000168476.11 TPM= 2.66 Transcript Type= protein_coding
chr8	22138020	22141946	22138020	22141946	-	transcript747.chr8.nic@REEP4	transcript747.chr8.nic	protein_coding	22141451,22140625,22140172,22139963,22138926,22138639,22138020	22141946,22140697,22140248,22140083,22139529,22138793,22138552	Gene ID= ENSG00000168476.11 TPM= 2.66 Transcript Type= NA
chr8	22164736	22212326	22164736	22212326	+	ENST00000306385.9@BMP1	ENST00000306385.9	protein_coding	22164736,22173602,22176143,22176533,22176961,22177852,22179705,22180368,22192049,22194058,22194445,22194724,22195462,22196680,22197240,22201803,22206854,22207303,22209445,22211594	22165553,22173715,22176313,22176650,22177139,22177957,22179829,22180483,22192151,22194174,22194590,22194919,22195587,22196840,22197420,22201928,22206981,22207516,22209695,22212326	Gene ID= ENSG00000168487.17 TPM= 9.56 Transcript Type= protein_coding
chr8	22198416	22201482	22198416	22201482	+	ENST00000522332.1@BMP1	ENST00000522332.1	protein_coding	22198416,22201118	22199387,22201482	Gene ID= ENSG00000168487.17 TPM= 1.06 Transcript Type= retained_intron
chr8	22219721	22232341	22219721	22232341	-	ENST00000454243.6@PHYHIP	ENST00000454243.6	protein_coding	22231796,22228193,22226851,22224226,22219721	22232341,22228386,22227025,22224343,22221887	Gene ID= ENSG00000168490.13 TPM= 6.37 Transcript Type= protein_coding
chr8	22245104	22251167	22245104	22251167	+	ENST00000306433.8@POLR3D	ENST00000306433.8	protein_coding	22245104,22245445,22247221,22247857,22248154,22248481,22249044,22250075,22250396	22245183,22245614,22247264,22248008,22248278,22248649,22249309,22250227,22251167	Gene ID= ENSG00000168495.12 TPM= 12.75 Transcript Type= protein_coding
chr8	22245235	22254600	22245235	22254600	+	ENST00000397802.8@POLR3D	ENST00000397802.8	protein_coding	22245235,22247221,22247857,22248154,22248481,22249044,22250075,22250396	22245614,22247264,22248008,22248278,22248649,22249309,22250227,22254600	Gene ID= ENSG00000168495.12 TPM= 6.37 Transcript Type= protein_coding
chr8	22367305	22422741	22367305	22422741	+	ENST00000381237.5@SLC39A14	ENST00000381237.5	protein_coding	22367305,22404696,22408310,22412037,22414780,22415769,22416073,22417651,22419552	22367408,22404980,22408496,22412206,22414902,22415957,22416280,22417835,22422741	Gene ID= ENSG00000104635.13 TPM= 10.83 Transcript Type= protein_coding
chr8	22441090	22541125	22441090	22541125	+	transcript785.chr8.nnic@PPP3CC	transcript785.chr8.nnic	protein_coding	22441090,22474954,22475500,22498001,22511086,22513293,22522491,22522655,22523643,22527392,22528506,22532225,22532921,22539469,22540615	22441458,22475151,22475624,22498112,22511231,22513432,22522568,22522749,22523756,22527517,22528577,22532306,22533018,22539498,22541125	Gene ID= ENSG00000120910.14 TPM= 2.66 Transcript Type= NA
chr8	22440996	22479156	22440996	22479156	+	transcript795.chr8.nnic@PPP3CC	transcript795.chr8.nnic	protein_coding	22440996,22474954,22475500,22477647	22441458,22475151,22475624,22479156	Gene ID= ENSG00000120910.14 TPM= 5.31 Transcript Type= NA
chr8	22441083	22541125	22441083	22541125	+	ENST00000240139.9@PPP3CC	ENST00000240139.9	protein_coding	22441083,22474954,22475500,22498001,22511086,22513293,22522491,22522655,22527392,22528506,22532225,22532921,22539469,22540615	22441458,22475151,22475624,22498112,22511231,22513432,22522568,22522749,22527517,22528577,22532306,22533018,22539498,22541125	Gene ID= ENSG00000120910.14 TPM= 35.58 Transcript Type= protein_coding
chr8	22464978	22468249	22464978	22468249	-	transcript799.chr8.nnic@NA	transcript799.chr8.nnic	NA	22464978	22468249	Gene ID= novel_gene_chr8_800 TPM= 8.5 Transcript Type= NA
chr8	22565778	22575495	22565778	22575495	+	transcript807.chr8.nic@SORBS3	transcript807.chr8.nic	protein_coding	22565778,22566661,22566822,22567061,22569148,22570910,22571718,22572340,22574667	22565872,22566713,22566868,22567175,22569273,22571221,22571821,22572446,22575495	Gene ID= ENSG00000120896.13 TPM= 4.6 Transcript Type= NA
chr8	22565956	22575495	22565956	22575495	+	transcript808.chr8.nic@SORBS3	transcript808.chr8.nic	protein_coding	22565956,22566661,22566822,22567061,22569148,22570910,22571718,22572340,22574667	22566484,22566713,22566868,22567175,22569273,22571221,22571821,22572446,22575495	Gene ID= ENSG00000120896.13 TPM= 6.19 Transcript Type= NA
chr8	22565678	22575495	22565678	22575495	+	ENST00000523965.5@SORBS3	ENST00000523965.5	protein_coding	22565678,22566345,22566661,22566822,22567061,22569148,22570910,22571718,22572340,22574667	22565872,22566484,22566713,22566868,22567175,22569273,22571221,22571821,22572446,22575495	Gene ID= ENSG00000120896.13 TPM= 68.86 Transcript Type= protein_coding
chr8	22599601	22604133	22599601	22604133	+	ENST00000409586.7@C8orf58	ENST00000409586.7	protein_coding	22599601,22600882,22601712,22601972,22602200,22602561,22603195	22599760,22601357,22601852,22602080,22602312,22602643,22604133	Gene ID= ENSG00000241852.9 TPM= 4.25 Transcript Type= protein_coding
chr8	22599601	22604150	22599601	22604150	+	ENST00000614574.4@C8orf58	ENST00000614574.4	protein_coding	22599601,22600882,22601712,22601972,22602200,22603195	22599760,22601357,22601852,22602080,22602312,22604150	Gene ID= ENSG00000241852.9 TPM= 4.25 Transcript Type= protein_coding
chr8	22599647	22604150	22599647	22604150	+	ENST00000289989.9@C8orf58	ENST00000289989.9	protein_coding	22599647,22600882,22601712,22601972,22602200,22602537,22603195	22599760,22601357,22601852,22602080,22602312,22602643,22604150	Gene ID= ENSG00000241852.9 TPM= 4.25 Transcript Type= protein_coding
chr8	22604632	22621514	22604632	22621514	+	ENST00000308511.8@CCAR2	ENST00000308511.8	protein_coding	22604632,22605736,22606085,22606607,22606910,22607196,22607969,22613017,22614092,22614390,22614838,22615425,22615682,22616012,22617420,22617696,22618349,22618617,22618827,22619150,22619638	22604842,22605831,22606176,22606698,22607024,22607325,22608065,22613136,22614314,22614503,22615001,22615596,22615912,22616248,22617564,22617778,22618495,22618728,22619015,22619355,22621514	Gene ID= ENSG00000158941.16 TPM= 2.12 Transcript Type= protein_coding
chr8	22620712	22669145	22620712	22669145	-	transcript834.chr8.nic@BIN3	transcript834.chr8.nic	protein_coding	22669044,22644755,22636922,22630442,22629964,22624222,22623915,22620712	22669145,22644803,22636962,22630578,22630004,22624363,22624049,22621568	Gene ID= ENSG00000147439.12 TPM= 3.19 Transcript Type= NA
chr8	22620418	22669120	22620418	22669120	-	ENST00000276416.10@BIN3	ENST00000276416.10	protein_coding	22669044,22644755,22636922,22636525,22630442,22629964,22624222,22623915,22620418	22669120,22644803,22636962,22636586,22630578,22630004,22624363,22624049,22621568	Gene ID= ENSG00000147439.12 TPM= 1.06 Transcript Type= protein_coding
chr8	22620712	22669113	22620712	22669113	-	ENST00000519513.5@BIN3	ENST00000519513.5	protein_coding	22669044,22644755,22630442,22629964,22624222,22623915,22620712	22669113,22644803,22630578,22630004,22624363,22624049,22621568	Gene ID= ENSG00000147439.12 TPM= 3.19 Transcript Type= protein_coding
chr8	22625758	22629090	22625758	22629090	-	transcript838.chr8.nnic@NA	transcript838.chr8.nnic	NA	22625758	22629090	Gene ID= novel_gene_chr8_839 TPM= 3.19 Transcript Type= NA
chr8	22687728	22691143	22687728	22691143	-	transcript840.chr8.nnic@NA	transcript840.chr8.nnic	NA	22687728	22691143	Gene ID= novel_gene_chr8_841 TPM= 16.99 Transcript Type= NA
chr8	22695695	22696330	22695695	22696330	+	transcript842.chr8.nnic@NA	transcript842.chr8.nnic	NA	22695695	22696330	Gene ID= novel_gene_chr8_843 TPM= 2.12 Transcript Type= NA
chr8	22713251	22927908	22713251	22927908	-	ENST00000256404.7@PEBP4	ENST00000256404.7	protein_coding	22927823,22927584,22920184,22817637,22727175,22724843,22713251	22927908,22927720,22920310,22817735,22727220,22724956,22713536	Gene ID= ENSG00000134020.7 TPM= 59.48 Transcript Type= protein_coding
chr8	22953619	23000168	22953619	23000168	-	transcript865.chr8.nnic@PEBP4	transcript865.chr8.nnic	protein_coding	22999679,22953619	23000168,22953825	Gene ID= ENSG00000134020.7 TPM= 3.19 Transcript Type= NA
chr8	22999579	23020199	22999579	23020199	+	ENST00000251822.6@RHOBTB2	ENST00000251822.6	protein_coding	22999579,23004425,23005372,23005960,23006728,23007993,23010538,23014690,23015638,23017252	23000105,23004626,23005475,23006145,23007746,23008111,23010688,23014778,23015743,23020199	Gene ID= ENSG00000008853.16 TPM= 143.39 Transcript Type= protein_coding
chr8	23013504	23016203	23013504	23016203	-	transcript866.chr8.nnic@NA	transcript866.chr8.nnic	NA	23013504	23016203	Gene ID= novel_gene_chr8_867 TPM= 2.12 Transcript Type= NA
chr8	23020133	23069179	23020133	23069179	-	ENST00000276431.8@TNFRSF10B	ENST00000276431.8	protein_coding	23068751,23043138,23030759,23029610,23028331,23027722,23027133,23024188,23020133	23069179,23043243,23030872,23029721,23028602,23027753,23027288,23024260,23022984	Gene ID= ENSG00000120889.12 TPM= 7.44 Transcript Type= protein_coding
chr8	23102590	23117437	23102590	23117437	+	ENST00000356864.3@TNFRSF10C	ENST00000356864.3	protein_coding	23102590,23111720,23114657,23115508,23116641	23103181,23111825,23114770,23115616,23117437	Gene ID= ENSG00000173535.13 TPM= 2.12 Transcript Type= protein_coding
chr8	23135588	23164030	23135588	23164030	-	ENST00000312584.3@TNFRSF10D	ENST00000312584.3	protein_coding	23163786,23154874,23148438,23146961,23145668,23145058,23144450,23138188,23135588	23164030,23154979,23148551,23147072,23145921,23145089,23144635,23138260,23138003	Gene ID= ENSG00000173530.5 TPM= 1.06 Transcript Type= protein_coding
chr8	23246642	23261992	23246642	23261992	+	ENST00000517325.5@CHMP7	ENST00000517325.5	protein_coding	23246642,23249210,23255247,23256460,23258033,23258330,23258732,23259066,23260144,23260538	23246824,23249381,23255432,23256593,23258081,23258449,23258830,23259126,23260323,23261992	Gene ID= ENSG00000147457.13 TPM= 10.62 Transcript Type= nonsense_mediated_decay
chr8	23252197	23254990	23252197	23254990	-	transcript880.chr8.nnic@NA	transcript880.chr8.nnic	NA	23252197	23254990	Gene ID= novel_gene_chr8_881 TPM= 10.62 Transcript Type= NA
chr8	23287908	23296279	23287908	23296279	+	ENST00000265806.10@R3HCC1	ENST00000265806.10	protein_coding	23287908,23288506,23289016,23289866,23291361,23293303,23294769,23295967	23288157,23288633,23289153,23290469,23291533,23293373,23294864,23296279	Gene ID= ENSG00000104679.10 TPM= 105.15 Transcript Type= protein_coding
chr8	23288083	23296279	23288083	23296279	+	transcript889.chr8.nnic@R3HCC1	transcript889.chr8.nnic	protein_coding	23288083,23288506,23289016,23289866,23291361,23293303,23294769,23295967	23288157,23288633,23289153,23290511,23291533,23293373,23294864,23296279	Gene ID= ENSG00000104679.10 TPM= 3.19 Transcript Type= NA
chr8	23297189	23404240	23297189	23404240	-	ENST00000389131.7@LOXL2	ENST00000389131.7	protein_coding	23403954,23367997,23360090,23340992,23333401,23328382,23322130,23319885,23316949,23309668,23303282,23302027,23298836,23297189	23404240,23368434,23360265,23341203,23333623,23328565,23322281,23320052,23317114,23309911,23303397,23302163,23298947,23298122	Gene ID= ENSG00000134013.15 TPM= 13.81 Transcript Type= protein_coding
chr8	23338859	23341564	23338859	23341564	+	transcript896.chr8.nnic@NA	transcript896.chr8.nnic	NA	23338859	23341564	Gene ID= novel_gene_chr8_897 TPM= 3.19 Transcript Type= NA
chr8	23429152	23457695	23429152	23457695	-	ENST00000358689.8@ENTPD4	ENST00000358689.8	protein_coding	23457557,23449893,23448742,23447680,23444456,23443850,23442007,23441569,23439749,23436934,23435392,23434317,23429152	23457695,23449997,23448939,23447885,23444606,23443953,23442066,23441723,23439915,23437258,23435477,23434478,23433154	Gene ID= ENSG00000197217.12 TPM= 36.11 Transcript Type= protein_coding
chr8	23528805	23575463	23528805	23575463	+	ENST00000519973.5@SLC25A37	ENST00000519973.5	protein_coding	23528805,23566108,23568322,23571335	23529212,23566336,23568378,23575463	Gene ID= ENSG00000147454.13 TPM= 9.56 Transcript Type= protein_coding
chr8	23528860	23572221	23528860	23572221	+	transcript915.chr8.nnic@SLC25A37	transcript915.chr8.nnic	protein_coding	23528860,23566108,23568322,23571335	23529212,23566913,23568378,23572221	Gene ID= ENSG00000147454.13 TPM= 2.12 Transcript Type= NA
chr8	23528975	23531925	23528975	23531925	+	ENST00000519192.1@SLC25A37	ENST00000519192.1	protein_coding	23528975,23531685	23529212,23531925	Gene ID= ENSG00000147454.13 TPM= 2.12 Transcript Type= processed_transcript
chr8	23528967	23572221	23528967	23572221	+	ENST00000518881.5@SLC25A37	ENST00000518881.5	protein_coding	23528967,23566108,23571335	23529212,23568378,23572221	Gene ID= ENSG00000147454.13 TPM= 9.56 Transcript Type= retained_intron
chr8	23529258	23531897	23529258	23531897	+	transcript927.chr8.nnic@NA	transcript927.chr8.nnic	NA	23529258	23531897	Gene ID= novel_gene_chr8_928 TPM= 2.12 Transcript Type= NA
chr8	23842120	23842983	23842120	23842983	-	transcript929.chr8.nnic@NA	transcript929.chr8.nnic	NA	23842120	23842983	Gene ID= novel_gene_chr8_930 TPM= 7.44 Transcript Type= NA
chr8	23841915	23854807	23841915	23854807	-	ENST00000290271.6@STC1	ENST00000290271.6	protein_coding	23854406,23852242,23851320,23841915	23854807,23852384,23851531,23845040	Gene ID= ENSG00000159167.11 TPM= 4.25 Transcript Type= protein_coding
chr8	24913761	24918976	24913761	24918976	+	ENST00000518131.5@NEFM	ENST00000518131.5	protein_coding	24913761,24915605,24917061,24918271	24914873,24915729,24917616,24918976	Gene ID= ENSG00000104722.13 TPM= 1.06 Transcript Type= protein_coding
chr8	24913012	24919093	24913012	24919093	+	ENST00000221166.9@NEFM	ENST00000221166.9	protein_coding	24913012,24915605,24917061	24914873,24915729,24919093	Gene ID= ENSG00000104722.13 TPM= 2.12 Transcript Type= protein_coding
chr8	24950955	24957110	24950955	24957110	-	ENST00000610854.1@NEFL	ENST00000610854.1	protein_coding	24955472,24954181,24953476,24950955	24957110,24954305,24953795,24952952	Gene ID= ENSG00000277586.2 TPM= 3.19 Transcript Type= protein_coding
chr8	25429739	25458421	25429739	25458421	-	transcript945.chr8.nic@KCTD9	transcript945.chr8.nic	protein_coding	25458199,25450380,25446129,25444292,25440577,25439606,25439279,25436418,25436235,25435363,25433330,25432504,25429739	25458421,25450481,25446250,25444335,25440673,25439664,25439407,25436485,25436330,25435512,25433435,25432637,25429973	Gene ID= ENSG00000104756.15 TPM= 3.19 Transcript Type= NA
chr8	25428023	25458339	25428023	25458339	-	transcript952.chr8.nic@KCTD9	transcript952.chr8.nic	protein_coding	25458199,25440577,25439606,25439279,25436418,25436235,25435363,25433330,25432504,25428023	25458339,25440673,25439664,25439407,25436485,25436330,25435512,25433435,25432637,25429973	Gene ID= ENSG00000104756.15 TPM= 2.66 Transcript Type= NA
chr8	25427847	25458467	25427847	25458467	-	ENST00000221200.8@KCTD9	ENST00000221200.8	protein_coding	25458199,25446129,25444292,25440577,25439606,25439279,25436418,25436235,25435363,25433330,25432504,25427847	25458467,25446250,25444335,25440673,25439664,25439407,25436485,25436330,25435512,25433435,25432637,25429973	Gene ID= ENSG00000104756.15 TPM= 6.9 Transcript Type= protein_coding
chr8	25841730	26045397	25841730	26045397	-	ENST00000520164.5@EBF2	ENST00000520164.5	protein_coding	26044729,26042095,26040939,26040616,26040028,26033085,25908474,25889752,25887842,25886755,25862709,25861309,25861049,25858319,25850594,25841730	26045397,26042251,26041002,26040671,26040101,26033153,25908555,25889869,25887972,25886881,25862797,25861374,25861226,25858504,25850761,25844640	Gene ID= ENSG00000221818.8 TPM= 4.25 Transcript Type= protein_coding
chr8	26291491	26372680	26291491	26372680	+	ENST00000380737.7@PPP2R2A	ENST00000380737.7	protein_coding	26291491,26293666,26338890,26354468,26360169,26360974,26362684,26363721,26366315,26370134	26291826,26293740,26338987,26354633,26360281,26361151,26362848,26363890,26366406,26372680	Gene ID= ENSG00000221914.9 TPM= 4.25 Transcript Type= protein_coding
chr8	26379264	26382993	26379264	26382993	-	transcript964.chr8.nnic@SDAD1P1	transcript964.chr8.nnic	transcribed_processed_pseudogene	26382311,26379264	26382993,26381866	Gene ID= ENSG00000228451.3 TPM= 2.12 Transcript Type= NA
chr8	26379259	26382953	26379259	26382953	-	ENST00000519902.1@SDAD1P1	ENST00000519902.1	transcribed_processed_pseudogene	26382388,26379259	26382953,26381866	Gene ID= ENSG00000228451.3 TPM= 3.19 Transcript Type= processed_transcript
chr8	26382898	26413129	26382898	26413129	+	ENST00000380629.6@BNIP3L	ENST00000380629.6	protein_coding	26382898,26391243,26395230,26408000,26408227,26410364	26383230,26391426,26395302,26408103,26408376,26413129	Gene ID= ENSG00000104765.15 TPM= 100.91 Transcript Type= protein_coding
chr8	26390362	26411048	26390362	26411048	+	ENST00000518611.5@BNIP3L	ENST00000518611.5	protein_coding	26390362,26391243,26395230,26408000,26408227,26410364	26390517,26391426,26395302,26408103,26408376,26411048	Gene ID= ENSG00000104765.15 TPM= 1.06 Transcript Type= protein_coding
chr8	26609084	26614133	26609084	26614133	+	transcript980.chr8.nnic@NA	transcript980.chr8.nnic	NA	26609084	26614133	Gene ID= novel_gene_chr8_981 TPM= 2.12 Transcript Type= NA
chr8	26646206	26649484	26646206	26649484	-	transcript982.chr8.nnic@NA	transcript982.chr8.nnic	NA	26646206	26649484	Gene ID= novel_gene_chr8_983 TPM= 2.12 Transcript Type= NA
chr8	26753819	26755488	26753819	26755488	-	transcript988.chr8.nnic@NA	transcript988.chr8.nnic	NA	26753819	26755488	Gene ID= novel_gene_chr8_989 TPM= 2.12 Transcript Type= NA
chr8	27285754	27311270	27285754	27311270	-	transcript990.chr8.nnic@TRIM35	transcript990.chr8.nnic	protein_coding	27310801,27304761,27298464,27294080,27290156,27289162,27285754	27311270,27304872,27298559,27294310,27290178,27289280,27288127	Gene ID= ENSG00000104228.12 TPM= 2.12 Transcript Type= NA
chr8	27284887	27311319	27284887	27311319	-	ENST00000305364.8@TRIM35	ENST00000305364.8	protein_coding	27310801,27298464,27294080,27290156,27289162,27284887	27311319,27298559,27294310,27290178,27289280,27288127	Gene ID= ENSG00000104228.12 TPM= 4.25 Transcript Type= protein_coding
chr8	27490779	27545564	27490779	27545564	+	ENST00000521400.5@EPHX2	ENST00000521400.5	protein_coding	27490779,27500926,27503604,27504956,27506872,27511836,27515718,27516320,27518038,27520883,27522423,27525362,27536784,27538659,27540554,27541473,27543749,27544186,27544444	27491309,27501010,27503763,27505146,27506994,27511910,27515813,27516398,27518072,27520909,27522508,27525473,27536855,27538692,27540656,27541542,27543829,27544244,27545564	Gene ID= ENSG00000120915.13 TPM= 45.67 Transcript Type= protein_coding
chr8	27491109	27544919	27491109	27544919	+	transcript999.chr8.nnic@EPHX2	transcript999.chr8.nnic	protein_coding	27491109,27500926,27503604,27504956,27506872,27511836,27515718,27516320,27518038,27520883,27522423,27525362,27536784,27538659,27540554,27541473,27543749,27544186,27544444	27491309,27501010,27503763,27505146,27506994,27511910,27515813,27516398,27518072,27520909,27522508,27525473,27536855,27538743,27540656,27541542,27543829,27544244,27544919	Gene ID= ENSG00000120915.13 TPM= 2.12 Transcript Type= NA
chr8	27538145	27544919	27538145	27544919	+	transcript1008.chr8.nic@EPHX2	transcript1008.chr8.nic	protein_coding	27538145,27541473,27543749,27544186,27544444	27540656,27541542,27543829,27544244,27544919	Gene ID= ENSG00000120915.13 TPM= 4.25 Transcript Type= NA
chr8	27597808	27611431	27597808	27611431	-	ENST00000405140.7@CLU	ENST00000405140.7	protein_coding	27611146,27610475,27608938,27606354,27604924,27604291,27599780,27598460,27597808	27611431,27610600,27609086,27606524,27605335,27604395,27600009,27598635,27598250	Gene ID= ENSG00000120885.21 TPM= 1.06 Transcript Type= protein_coding
chr8	27596917	27615031	27596917	27615031	-	ENST00000316403.14@CLU	ENST00000316403.14	protein_coding	27614655,27610475,27608938,27606354,27604924,27604291,27599780,27598460,27596917	27615031,27610600,27609086,27606524,27605335,27604395,27600009,27598635,27598250	Gene ID= ENSG00000120885.21 TPM= 221.99 Transcript Type= protein_coding
chr8	27608937	27614681	27608937	27614681	-	ENST00000519472.5@CLU	ENST00000519472.5	protein_coding	27614655,27610475,27608937	27614681,27610600,27609086	Gene ID= ENSG00000120885.21 TPM= 2.12 Transcript Type= protein_coding
chr8	27633843	27659877	27633843	27659877	+	transcript1023.chr8.nic@SCARA3	transcript1023.chr8.nic	protein_coding	27633843,27649702,27651508,27656782,27658496	27634207,27649800,27651627,27656880,27659877	Gene ID= ENSG00000168077.13 TPM= 2.12 Transcript Type= NA
chr8	27733318	27772653	27733318	27772653	-	ENST00000520486.5@CCDC25	ENST00000520486.5	protein_coding	27772513,27765204,27762419,27752512,27748495,27748077,27740472,27733318	27772653,27765251,27762458,27752587,27748598,27748279,27740517,27736245	Gene ID= ENSG00000147419.17 TPM= 5.31 Transcript Type= nonsense_mediated_decay
chr8	27748125	27772649	27748125	27772649	-	transcript1033.chr8.nic@CCDC25	transcript1033.chr8.nic	protein_coding	27772513,27765204,27762419,27756719,27752512,27748495,27748125	27772649,27765251,27762458,27756770,27752587,27748598,27748279	Gene ID= ENSG00000147419.17 TPM= 10.62 Transcript Type= NA
chr8	27748125	27772649	27748125	27772649	-	transcript1038.chr8.nic@CCDC25	transcript1038.chr8.nic	protein_coding	27772513,27765204,27762419,27752512,27748125	27772649,27765251,27762458,27752587,27748279	Gene ID= ENSG00000147419.17 TPM= 5.31 Transcript Type= NA
chr8	27733311	27772634	27733311	27772634	-	ENST00000356537.8@CCDC25	ENST00000356537.8	protein_coding	27772513,27765204,27762419,27756719,27752512,27748495,27748077,27740472,27733311	27772634,27765251,27762458,27756770,27752587,27748598,27748279,27740517,27736245	Gene ID= ENSG00000147419.17 TPM= 6.37 Transcript Type= protein_coding
chr8	27735052	27772639	27735052	27772639	-	ENST00000520202.5@CCDC25	ENST00000520202.5	protein_coding	27772513,27765204,27762419,27752512,27748077,27740472,27735052	27772639,27765251,27762458,27752587,27748279,27740517,27736245	Gene ID= ENSG00000147419.17 TPM= 10.62 Transcript Type= nonsense_mediated_decay
chr8	27869882	27992727	27869882	27992727	-	ENST00000354914.7@SCARA5	ENST00000354914.7	protein_coding	27992257,27987504,27966414,27921571,27909663,27907148,27904778,27879569,27869882	27992727,27987630,27966542,27922245,27909743,27907246,27904834,27879766,27872070	Gene ID= ENSG00000168079.16 TPM= 8.5 Transcript Type= protein_coding
chr8	28092838	28191156	28092838	28191156	+	ENST00000256398.12@ELP3	ENST00000256398.12	protein_coding	28092838,28097219,28099828,28106713,28107913,28110370,28113019,28129502,28132278,28137698,28155942,28158568,28160229,28161997,28189649	28093233,28097318,28099966,28106783,28107976,28110438,28113173,28129663,28132404,28137891,28156032,28158633,28160456,28162078,28191156	Gene ID= ENSG00000134014.16 TPM= 24.43 Transcript Type= protein_coding
chr8	28348287	28386185	28348287	28386185	-	transcript1053.chr8.nic@ZNF395	transcript1053.chr8.nic	protein_coding	28386004,28360885,28359592,28356670,28353173,28352573,28351495,28350064,28349125,28348287	28386185,28361182,28359824,28356779,28353408,28352673,28351807,28350156,28349228,28348830	Gene ID= ENSG00000186918.13 TPM= 2.12 Transcript Type= NA
chr8	28348559	28386073	28348559	28386073	-	ENST00000523095.5@ZNF395	ENST00000523095.5	protein_coding	28386004,28360885,28359592,28356670,28353173,28352573,28351495,28350064,28349125,28348559	28386073,28361142,28359824,28356779,28353408,28352673,28351807,28350156,28349228,28348830	Gene ID= ENSG00000186918.13 TPM= 1.06 Transcript Type= protein_coding
chr8	28494228	28527826	28494228	28527826	+	transcript1057.chr8.nic@FZD3	transcript1057.chr8.nic	protein_coding	28494228,28499933,28502670,28520638,28527147	28494343,28499978,28503202,28520834,28527826	Gene ID= ENSG00000104290.10 TPM= 3.19 Transcript Type= NA
chr8	28701327	28753687	28701327	28753687	+	ENST00000220562.8@EXTL3	ENST00000220562.8	protein_coding	28701327,28713457,28715585,28731223,28737519,28743086,28750657	28701659,28713550,28718207,28731350,28737663,28743214,28753687	Gene ID= ENSG00000012232.8 TPM= 46.74 Transcript Type= protein_coding
chr8	28701548	28702526	28701548	28702526	+	transcript1062.chr8.nnic@EXTL3	transcript1062.chr8.nnic	protein_coding	28701548,28701965	28701659,28702526	Gene ID= ENSG00000012232.8 TPM= 5.31 Transcript Type= NA
chr8	28767661	28889964	28767661	28889964	-	ENST00000521022.5@INTS9	ENST00000521022.5	protein_coding	28889874,28859436,28850213,28846747,28837637,28835292,28813492,28812327,28796544,28793807,28787829,28780823,28777829,28775759,28770982,28769889,28767661	28889964,28859563,28850273,28846809,28837776,28835378,28813612,28812461,28796655,28793987,28787889,28780994,28777953,28775926,28771080,28770026,28768322	Gene ID= ENSG00000104299.14 TPM= 26.55 Transcript Type= protein_coding
chr8	28793729	28889921	28793729	28889921	-	ENST00000520983.5@INTS9	ENST00000520983.5	protein_coding	28889874,28859436,28850213,28846747,28837637,28835292,28813492,28812327,28796544,28793729	28889921,28859563,28850273,28846809,28837776,28835378,28813612,28812461,28796655,28793987	Gene ID= ENSG00000104299.14 TPM= 1.06 Transcript Type= retained_intron
chr8	28890370	29051918	28890370	29051918	+	transcript1072.chr8.nic@HMBOX1	transcript1072.chr8.nic	protein_coding	28890370,28963811,28970043,28980071,29009072,29018760,29045361,29047358,29048954,29049290,29051018	28890678,28963890,28970519,28980156,29009182,29018913,29045443,29047453,29049048,29049361,29051918	Gene ID= ENSG00000147421.17 TPM= 2.12 Transcript Type= NA
chr8	28890370	29051918	28890370	29051918	+	transcript1073.chr8.nnic@HMBOX1	transcript1073.chr8.nnic	protein_coding	28890370,28963811,28970043,28980071,29009072,29018760,29045361,29047358,29048954,29049290,29051018	28890678,28963890,28970519,28980156,29009182,29018913,29045443,29047453,29049048,29049394,29051918	Gene ID= ENSG00000147421.17 TPM= 13.28 Transcript Type= NA
chr8	28890370	29051918	28890370	29051918	+	transcript1074.chr8.nnic@HMBOX1	transcript1074.chr8.nnic	protein_coding	28890370,28963811,28970043,28980071,29009072,29018760,29045361,29047358,29048954,29050202,29051018	28890678,28963890,28970519,28980156,29009182,29018913,29045443,29047453,29049048,29050253,29051918	Gene ID= ENSG00000147421.17 TPM= 3.19 Transcript Type= NA
chr8	28891183	29051918	28891183	29051918	+	transcript1076.chr8.nnic@HMBOX1	transcript1076.chr8.nnic	protein_coding	28891183,28963811,28970043,28980071,29009072,29018760,29045361,29047358,29048954,29049290,29051018	28891484,28963890,28970519,28980156,29009182,29018913,29045443,29047453,29049048,29049394,29051918	Gene ID= ENSG00000147421.17 TPM= 3.72 Transcript Type= NA
chr8	29055926	29058313	29055926	29058313	-	transcript1081.chr8.nnic@NA	transcript1081.chr8.nnic	NA	29055926	29058313	Gene ID= novel_gene_chr8_1082 TPM= 224.12 Transcript Type= NA
chr8	29061290	29064937	29061290	29064937	+	transcript1084.chr8.nnic@NA	transcript1084.chr8.nnic	NA	29061290	29064937	Gene ID= novel_gene_chr8_1085 TPM= 16.99 Transcript Type= NA
chr8	29067279	29263073	29067279	29263073	-	ENST00000524189.5@KIF13B	ENST00000524189.5	protein_coding	29262980,29245346,29196187,29190997,29188515,29186292,29181919,29180104,29177466,29176068,29167373,29165662,29160733,29155726,29150297,29148577,29147392,29146378,29142157,29140468,29140063,29134040,29132308,29130533,29127122,29126482,29124024,29123366,29122591,29118868,29116831,29113463,29109918,29109434,29108139,29099133,29092745,29075281,29071620,29067279	29263073,29245439,29196199,29191057,29188607,29186472,29182006,29180238,29177578,29176179,29167585,29165772,29160867,29155856,29150383,29148767,29147602,29146540,29142303,29140617,29140191,29134210,29132465,29130665,29127268,29126511,29124123,29123492,29122646,29118992,29117007,29113555,29110070,29109511,29108192,29099241,29092878,29075343,29072316,29070766	Gene ID= ENSG00000197892.12 TPM= 13.81 Transcript Type= protein_coding
chr8	29145863	29263097	29145863	29263097	-	ENST00000521515.1@KIF13B	ENST00000521515.1	protein_coding	29262980,29245346,29196187,29190997,29188515,29186292,29181919,29180104,29177466,29176068,29167373,29165662,29160733,29155726,29150297,29148577,29147392,29145863	29263097,29245439,29196199,29191057,29188607,29186472,29182006,29180238,29177578,29176179,29167585,29165772,29160867,29155856,29150383,29148767,29147602,29146540	Gene ID= ENSG00000197892.12 TPM= 3.19 Transcript Type= protein_coding
chr8	30063012	30083207	30063012	30083207	-	ENST00000256255.10@SARAF	ENST00000256255.10	protein_coding	30082847,30073877,30069642,30066777,30065988,30063012	30083207,30074055,30070059,30066918,30066139,30063913	Gene ID= ENSG00000133872.13 TPM= 280.41 Transcript Type= protein_coding
chr8	30063012	30083208	30063012	30083208	-	ENST00000545648.2@SARAF	ENST00000545648.2	protein_coding	30082847,30069642,30066777,30065988,30063012	30083208,30070059,30066918,30066139,30063913	Gene ID= ENSG00000133872.13 TPM= 48.86 Transcript Type= protein_coding
chr8	30063098	30083124	30063098	30083124	-	ENST00000518174.5@SARAF	ENST00000518174.5	protein_coding	30082847,30073877,30069642,30066777,30065988,30063098	30083124,30074051,30070059,30066918,30066139,30063913	Gene ID= ENSG00000133872.13 TPM= 283.6 Transcript Type= nonsense_mediated_decay
chr8	30063130	30083153	30063130	30083153	-	ENST00000520303.5@SARAF	ENST00000520303.5	protein_coding	30082847,30069642,30066777,30065988,30063130	30083153,30070059,30066918,30066139,30063913	Gene ID= ENSG00000133872.13 TPM= 48.86 Transcript Type= nonsense_mediated_decay
chr8	30095398	30108524	30095398	30108524	+	ENST00000321250.12@LEPROTL1	ENST00000321250.12	protein_coding	30095398,30101898,30104300,30105746	30095528,30101973,30104486,30108524	Gene ID= ENSG00000104660.17 TPM= 9.56 Transcript Type= protein_coding
chr8	30155830	30156232	30155830	30156232	-	ENST00000607315.1@AC026979.3	ENST00000607315.1	lincRNA	30155830	30156232	Gene ID= ENSG00000271869.1 TPM= 2.12 Transcript Type= lincRNA
chr8	30156297	30183640	30156297	30183640	+	ENST00000221114.7@DCTN6	ENST00000221114.7	protein_coding	30156297,30164111,30175085,30177126,30179408,30180488,30183075	30156406,30164175,30175190,30177214,30179455,30180630,30183640	Gene ID= ENSG00000104671.7 TPM= 13.81 Transcript Type= protein_coding
chr8	30382119	30385401	30382119	30385401	-	ENST00000517521.5@RBPMS-AS1	ENST00000517521.5	antisense_RNA	30385144,30383544,30382119	30385401,30383697,30382615	Gene ID= ENSG00000254109.5 TPM= 1.06 Transcript Type= antisense_RNA
chr8	30382124	30385301	30382124	30385301	-	transcript1162.chr8.nnic@RBPMS-AS1	transcript1162.chr8.nnic	antisense_RNA	30385144,30383128,30382124	30385301,30383362,30382615	Gene ID= ENSG00000254109.5 TPM= 2.12 Transcript Type= NA
chr8	30384392	30547517	30384392	30547517	+	transcript1126.chr8.nic@RBPMS	transcript1126.chr8.nic	protein_coding	30384392,30474779,30477799,30479315,30504286,30544494,30545164,30547292	30385158,30474856,30477837,30479377,30504436,30544624,30545220,30547517	Gene ID= ENSG00000157110.15 TPM= 9.24 Transcript Type= NA
chr8	30384428	30572256	30384428	30572256	+	transcript1132.chr8.nnic@RBPMS	transcript1132.chr8.nnic	protein_coding	30384428,30474779,30477799,30479315,30504286,30558887,30566257,30570637	30385158,30474856,30477837,30479377,30504436,30558956,30566360,30572256	Gene ID= ENSG00000157110.15 TPM= 9.56 Transcript Type= NA
chr8	30384160	30547515	30384160	30547515	+	transcript1146.chr8.nnic@RBPMS	transcript1146.chr8.nnic	protein_coding	30384160,30474779,30477799,30479315,30504286,30547292	30385158,30474856,30477837,30479377,30504436,30547515	Gene ID= ENSG00000157110.15 TPM= 26.95 Transcript Type= NA
chr8	30384420	30506358	30384420	30506358	+	transcript1151.chr8.nic@RBPMS	transcript1151.chr8.nic	protein_coding	30384420,30474779,30477799,30479315,30504286	30385158,30474856,30477837,30479377,30506358	Gene ID= ENSG00000157110.15 TPM= 19.12 Transcript Type= NA
chr8	30384479	30572261	30384479	30572261	+	ENST00000397323.8@RBPMS	ENST00000397323.8	protein_coding	30384479,30474779,30477799,30479315,30504286,30544494,30558887,30566257,30570637	30385158,30474856,30477837,30479377,30504436,30544624,30558956,30566360,30572261	Gene ID= ENSG00000157110.15 TPM= 30.09 Transcript Type= protein_coding
chr8	30384511	30547522	30384511	30547522	+	ENST00000339877.8@RBPMS	ENST00000339877.8	protein_coding	30384511,30474779,30477799,30479315,30504286,30544494,30547292	30385158,30474856,30477837,30479377,30504436,30544624,30547522	Gene ID= ENSG00000157110.15 TPM= 107.81 Transcript Type= protein_coding
chr8	30385203	30547483	30385203	30547483	+	ENST00000520161.5@RBPMS	ENST00000520161.5	protein_coding	30385203,30474779,30477799,30479315,30504286,30544494,30547292	30385390,30474856,30477837,30479377,30504436,30544624,30547483	Gene ID= ENSG00000157110.15 TPM= 2.12 Transcript Type= protein_coding
chr8	30409198	30410452	30409198	30410452	-	transcript1169.chr8.nnic@NA	transcript1169.chr8.nnic	NA	30409198	30410452	Gene ID= novel_gene_chr8_1170 TPM= 2.12 Transcript Type= NA
chr8	30414702	30416277	30414702	30416277	-	transcript1171.chr8.nnic@NA	transcript1171.chr8.nnic	NA	30414702	30416277	Gene ID= novel_gene_chr8_1172 TPM= 2.12 Transcript Type= NA
chr8	30514682	30518333	30514682	30518333	-	transcript1173.chr8.nnic@NA	transcript1173.chr8.nnic	NA	30514682	30518333	Gene ID= novel_gene_chr8_1174 TPM= 16.99 Transcript Type= NA
chr8	30545103	30547513	30545103	30547513	+	transcript1165.chr8.nnic@NA	transcript1165.chr8.nnic	NA	30545103	30547513	Gene ID= novel_gene_chr8_1166 TPM= 2.12 Transcript Type= NA
chr8	30566432	30570757	30566432	30570757	+	transcript1167.chr8.nnic@NA	transcript1167.chr8.nnic	NA	30566432	30570757	Gene ID= novel_gene_chr8_1168 TPM= 3.19 Transcript Type= NA
chr8	30578318	30658251	30578318	30658251	-	ENST00000355904.8@GTF2E2	ENST00000355904.8	protein_coding	30657973,30653433,30635032,30614608,30612299,30607057,30580281,30578318	30658251,30653602,30635123,30614715,30612481,30607150,30580396,30579037	Gene ID= ENSG00000197265.8 TPM= 30.8 Transcript Type= protein_coding
chr8	30678061	30727926	30678061	30727926	-	ENST00000221130.9@GSR	ENST00000221130.9	protein_coding	30727530,30712062,30709814,30708072,30703093,30700081,30696380,30692969,30689161,30684088,30681930,30680904,30678061	30727926,30712088,30709902,30708141,30703240,30700135,30696479,30693055,30689319,30684199,30682061,30681037,30679669	Gene ID= ENSG00000104687.12 TPM= 101.97 Transcript Type= protein_coding
chr8	30744165	30767006	30744165	30767006	+	ENST00000265616.9@UBXN8	ENST00000265616.9	protein_coding	30744165,30751396,30753035,30754665,30756765,30760888,30763273,30766227	30744277,30751518,30753105,30754787,30756887,30760929,30763347,30767006	Gene ID= ENSG00000104691.14 TPM= 2.12 Transcript Type= protein_coding
chr8	30785616	30812830	30785616	30812830	-	transcript1191.chr8.nnic@PPP2CB	transcript1191.chr8.nnic	protein_coding	30812320,30799546,30797581,30794192,30793917,30791197,30786432,30785616	30812830,30799755,30797754,30794281,30794078,30791315,30786494,30786307	Gene ID= ENSG00000104695.12 TPM= 4.25 Transcript Type= NA
chr8	30785610	30812872	30785610	30812872	-	ENST00000221138.8@PPP2CB	ENST00000221138.8	protein_coding	30812320,30799546,30797581,30794192,30793917,30791197,30785610	30812872,30799755,30797754,30794281,30794078,30791315,30786307	Gene ID= ENSG00000104695.12 TPM= 131.71 Transcript Type= protein_coding
chr8	31033801	31173769	31033801	31173769	+	ENST00000298139.5@WRN	ENST00000298139.5	protein_coding	31033801,31058372,31059153,31064289,31064915,31067033,31068258,31076173,31080867,31083699,31085166,31087776,31088890,31090465,31090834,31091830,31096768,31100849,31111615,31116354,31120243,31124522,31124908,31132365,31141430,31141681,31142626,31143550,31147053,31147364,31150341,31154624,31157368,31167022,31172995	31033973,31058543,31059265,31064434,31065063,31067182,31068327,31076287,31081296,31083779,31085246,31087920,31088965,31090532,31090942,31091898,31096850,31100955,31111799,31116528,31120424,31124623,31125000,31132506,31141600,31141775,31142701,31143623,31147128,31147476,31150455,31154755,31157530,31167230,31173769	Gene ID= ENSG00000165392.9 TPM= 3.19 Transcript Type= protein_coding
chr8	31033802	31076611	31033802	31076611	+	transcript1204.chr8.nic@WRN	transcript1204.chr8.nic	protein_coding	31033802,31058372,31059153,31064289,31064915,31067033,31068258,31076173	31033973,31058543,31059265,31064434,31065063,31067182,31068327,31076611	Gene ID= ENSG00000165392.9 TPM= 2.12 Transcript Type= NA
chr8	33370824	33473422	33370824	33473422	-	ENST00000327671.9@FUT10	ENST00000327671.9	protein_coding	33473064,33461372,33453216,33388963,33370824	33473422,33461725,33453510,33389798,33372804	Gene ID= ENSG00000172728.15 TPM= 2.12 Transcript Type= protein_coding
chr8	33498956	33513601	33498956	33513601	-	ENST00000431156.6@TTI2	ENST00000431156.6	protein_coding	33513082,33511967,33509746,33507229,33503748,33503429,33500328,33498956	33513601,33512712,33509932,33507321,33503935,33503572,33500490,33499277	Gene ID= ENSG00000129696.12 TPM= 2.12 Transcript Type= protein_coding
chr8	33498954	33513109	33498954	33513109	-	ENST00000360742.9@TTI2	ENST00000360742.9	protein_coding	33511967,33509746,33507229,33503748,33503429,33500328,33498954	33513109,33509932,33507321,33503935,33503572,33500490,33499277	Gene ID= ENSG00000129696.12 TPM= 6.37 Transcript Type= protein_coding
chr8	33498675	33500688	33498675	33500688	-	transcript1220.chr8.nnic@NA	transcript1220.chr8.nnic	NA	33498675	33500688	Gene ID= novel_gene_chr8_1221 TPM= 23.37 Transcript Type= NA
chr8	33513475	33513578	33513475	33513578	+	ENST00000459299.1@SNORD13	ENST00000459299.1	snoRNA	33513475	33513578	Gene ID= ENSG00000239039.1 TPM= 8.5 Transcript Type= snoRNA
chr8	33547755	33553090	33547755	33553090	-	transcript1222.chr8.nic@RNF122	transcript1222.chr8.nic	protein_coding	33551344,33551044,33549410,33547755	33553090,33551085,33549492,33548867	Gene ID= ENSG00000133874.1 TPM= 12.75 Transcript Type= NA
chr8	33591332	33600106	33591332	33600106	-	ENST00000256261.8@DUSP26	ENST00000256261.8	protein_coding	33599665,33597295,33593533,33591332	33600106,33597591,33593747,33592212	Gene ID= ENSG00000133878.8 TPM= 275.63 Transcript Type= protein_coding
chr8	37695751	37700021	37695751	37700021	+	ENST00000331569.5@ZNF703	ENST00000331569.5	protein_coding	37695751,37697145	37696222,37700021	Gene ID= ENSG00000183779.6 TPM= 10.62 Transcript Type= protein_coding
chr8	37736681	37746553	37736681	37746553	+	ENST00000518586.5@ERLIN2	ENST00000518586.5	protein_coding	37736681,37737908,37740365,37741772,37744355,37744571	37737007,37738029,37740446,37741818,37744416,37746553	Gene ID= ENSG00000147475.14 TPM= 1.06 Transcript Type= protein_coding
chr8	37736625	37746550	37736625	37746550	+	ENST00000523887.5@ERLIN2	ENST00000523887.5	protein_coding	37736625,37737908,37740365,37741772,37744355,37744571	37736678,37738029,37740446,37741818,37744416,37746550	Gene ID= ENSG00000147475.14 TPM= 1.06 Transcript Type= protein_coding
chr8	37755984	37757388	37755984	37757388	+	transcript1245.chr8.nnic@NA	transcript1245.chr8.nnic	NA	37755984	37757388	Gene ID= novel_gene_chr8_1246 TPM= 2.12 Transcript Type= NA
chr8	37762593	37779767	37762593	37779767	+	ENST00000328195.7@PLPBP	ENST00000328195.7	protein_coding	37762593,37765526,37765711,37766280,37772755,37775339,37775918,37777973	37762758,37765633,37765746,37766355,37772889,37775481,37776016,37779767	Gene ID= ENSG00000147471.11 TPM= 41.42 Transcript Type= protein_coding
chr8	37762590	37768404	37762590	37768404	+	transcript1254.chr8.nnic@PLPBP	transcript1254.chr8.nnic	protein_coding	37762590,37765526,37765711,37766280,37767827	37762758,37765633,37765746,37766355,37768404	Gene ID= ENSG00000147471.11 TPM= 3.19 Transcript Type= NA
chr8	37842915	37843925	37842915	37843925	+	transcript1260.chr8.nnic@NA	transcript1260.chr8.nnic	NA	37842915	37843925	Gene ID= novel_gene_chr8_1261 TPM= 2.12 Transcript Type= NA
chr8	37858949	37899454	37858949	37899454	-	ENST00000330843.8@RAB11FIP1	ENST00000330843.8	protein_coding	37899071,37877109,37874515,37871278,37870420,37858949	37899454,37877551,37875322,37873179,37870528,37863113	Gene ID= ENSG00000156675.15 TPM= 4.25 Transcript Type= protein_coding
chr8	38030341	38060365	38030341	38060365	+	ENST00000338825.4@EIF4EBP1	ENST00000338825.4	protein_coding	38030341,38057081,38059904	38030718,38057260,38060365	Gene ID= ENSG00000187840.4 TPM= 36.11 Transcript Type= protein_coding
chr8	38105520	38139703	38105520	38139703	+	transcript1269.chr8.nnic@ASH2L	transcript1269.chr8.nnic	protein_coding	38105520,38106378,38107021,38110379,38110739,38114192,38114905,38116650,38117452,38119270,38120932,38128291,38128758,38133454,38135668,38138816,38138964	38105738,38106444,38107166,38110467,38110833,38114287,38115000,38116725,38117469,38119363,38121149,38128458,38128951,38133546,38135766,38138875,38139703	Gene ID= ENSG00000129691.15 TPM= 14.87 Transcript Type= NA
chr8	38105242	38139965	38105242	38139965	+	ENST00000343823.10@ASH2L	ENST00000343823.10	protein_coding	38105242,38106378,38107021,38110379,38110739,38114192,38114905,38116650,38119270,38120932,38128291,38128758,38133454,38135668,38138816,38138964	38105738,38106444,38107166,38110467,38110833,38114287,38115000,38116725,38119363,38121149,38128458,38128951,38133546,38135766,38138875,38139965	Gene ID= ENSG00000129691.15 TPM= 30.8 Transcript Type= protein_coding
chr8	38163321	38176716	38163321	38176716	-	ENST00000311351.8@LSM1	ENST00000311351.8	protein_coding	38176275,38171965,38169802,38163321	38176716,38172033,38169917,38163840	Gene ID= ENSG00000175324.9 TPM= 63.73 Transcript Type= protein_coding
chr8	38176599	38213301	38176599	38213301	+	ENST00000287322.4@BAG4	ENST00000287322.4	protein_coding	38176599,38192688,38207512,38209013,38210008	38177139,38192795,38207766,38209267,38213301	Gene ID= ENSG00000156735.10 TPM= 18.06 Transcript Type= protein_coding
chr8	38176588	38210888	38176588	38210888	+	ENST00000432471.6@BAG4	ENST00000432471.6	protein_coding	38176588,38207512,38209013,38210008	38177139,38207766,38209267,38210888	Gene ID= ENSG00000156735.10 TPM= 1.06 Transcript Type= protein_coding
chr8	38231611	38260811	38231611	38260811	+	transcript1286.chr8.nic@DDHD2	transcript1286.chr8.nic	protein_coding	38231611,38232987,38234394,38237538,38238089,38240275,38242250,38245742,38246233,38247713,38249708,38251912,38252132,38252722,38252957,38253556,38260040,38260564	38231859,38233214,38234584,38237627,38238209,38240364,38242385,38245950,38246300,38247835,38249803,38252028,38252287,38252824,38253127,38253718,38260147,38260811	Gene ID= ENSG00000085788.13 TPM= 3.19 Transcript Type= NA
chr8	38231585	38260254	38231585	38260254	+	transcript1294.chr8.nic@DDHD2	transcript1294.chr8.nic	protein_coding	38231585,38232987,38234394,38237538,38238089,38240275,38242250,38245742,38246233,38247713,38249708,38251912,38252132,38252722,38252957,38253556,38260040	38231859,38233214,38234584,38237627,38238209,38240364,38242385,38245950,38246300,38247835,38249803,38252028,38252287,38252824,38253127,38253718,38260254	Gene ID= ENSG00000085788.13 TPM= 8.5 Transcript Type= NA
chr8	38231612	38262766	38231612	38262766	+	transcript1297.chr8.nic@DDHD2	transcript1297.chr8.nic	protein_coding	38231612,38232987,38234394,38237538,38238089,38242250,38245742,38246233,38247713,38249708,38251912,38252132,38252722,38252957,38253556,38260040,38260600	38231859,38233214,38234584,38237627,38238209,38242385,38245950,38246300,38247835,38249803,38252028,38252287,38252824,38253127,38253718,38260147,38262766	Gene ID= ENSG00000085788.13 TPM= 7.44 Transcript Type= NA
chr8	38266980	38269225	38266980	38269225	-	transcript1308.chr8.nnic@PLPP5	transcript1308.chr8.nnic	protein_coding	38269126,38268882,38268371,38267897,38267606,38266980	38269225,38268990,38268461,38267960,38267732,38267391	Gene ID= ENSG00000147535.16 TPM= 2.12 Transcript Type= NA
chr8	38266981	38269225	38266981	38269225	-	transcript1309.chr8.nnic@PLPP5	transcript1309.chr8.nnic	protein_coding	38269126,38268882,38268371,38267897,38267666,38266981	38269225,38268990,38268461,38267960,38267732,38267391	Gene ID= ENSG00000147535.16 TPM= 2.12 Transcript Type= NA
chr8	38263130	38269225	38263130	38269225	-	transcript1313.chr8.nic@PLPP5	transcript1313.chr8.nic	protein_coding	38269126,38267897,38267267,38266141,38263130	38269225,38268990,38267391,38266311,38264604	Gene ID= ENSG00000147535.16 TPM= 3.19 Transcript Type= NA
chr8	38266980	38269225	38266980	38269225	-	transcript1317.chr8.nic@PLPP5	transcript1317.chr8.nic	protein_coding	38269126,38267606,38266980	38269225,38268990,38267391	Gene ID= ENSG00000147535.16 TPM= 2.12 Transcript Type= NA
chr8	38263130	38269220	38263130	38269220	-	ENST00000424479.6@PLPP5	ENST00000424479.6	protein_coding	38269126,38268882,38268371,38267897,38267267,38266141,38263130	38269220,38268990,38268461,38267960,38267391,38266311,38264604	Gene ID= ENSG00000147535.16 TPM= 18.06 Transcript Type= protein_coding
chr8	38264739	38269207	38264739	38269207	-	ENST00000422581.6@PLPP5	ENST00000422581.6	protein_coding	38269126,38268882,38268371,38267897,38267267,38266141,38264739	38269207,38268990,38268461,38267960,38267391,38266311,38264949	Gene ID= ENSG00000147535.16 TPM= 3.19 Transcript Type= protein_coding
chr8	38267001	38269230	38267001	38269230	-	ENST00000528814.1@PLPP5	ENST00000528814.1	protein_coding	38269126,38267897,38267001	38269230,38268990,38267391	Gene ID= ENSG00000147535.16 TPM= 6.37 Transcript Type= retained_intron
chr8	38382364	38383461	38382364	38383461	+	ENST00000607047.1@AC087623.3	ENST00000607047.1	lincRNA	38382364	38383461	Gene ID= ENSG00000272092.1 TPM= 2.12 Transcript Type= lincRNA
chr8	38411138	38468641	38411138	38468641	-	ENST00000397091.9@FGFR1	ENST00000397091.9	protein_coding	38467981,38457356,38429682,38428352,38427921,38426122,38424509,38421797,38419533,38418228,38417870,38417306,38415870,38414779,38414559,38414152,38413918,38411138	38468641,38457534,38429948,38428435,38428093,38426245,38424699,38421941,38419735,38418373,38417991,38417416,38416060,38414901,38414629,38414289,38414023,38413804	Gene ID= ENSG00000077782.19 TPM= 9.03 Transcript Type= protein_coding
chr8	38411139	38468834	38411139	38468834	-	ENST00000619564.3@FGFR1	ENST00000619564.3	protein_coding	38467981,38457356,38428352,38427921,38426122,38424509,38419533,38418228,38417870,38417306,38415870,38414779,38414559,38414152,38413918,38411139	38468834,38457534,38428435,38428093,38426245,38424699,38419735,38418373,38417991,38417416,38416060,38414901,38414629,38414289,38414023,38413804	Gene ID= ENSG00000077782.19 TPM= 7.97 Transcript Type= protein_coding
chr8	38423313	38428761	38423313	38428761	-	transcript1337.chr8.nic@FGFR1	transcript1337.chr8.nic	protein_coding	38427921,38426122,38423313	38428761,38426245,38424699	Gene ID= ENSG00000077782.19 TPM= 3.19 Transcript Type= NA
chr8	38440577	38443226	38440577	38443226	-	transcript1341.chr8.nnic@NA	transcript1341.chr8.nnic	NA	38440577	38443226	Gene ID= novel_gene_chr8_1342 TPM= 3.19 Transcript Type= NA
chr8	38728190	38850793	38728190	38850793	+	ENST00000520615.5@TACC1	ENST00000520615.5	protein_coding	38728190,38788704,38819522,38825308,38827168,38831125,38836162,38838470,38840224,38842287,38843289,38846699,38847955	38728671,38788819,38820635,38825368,38827375,38831177,38836287,38838546,38840267,38842447,38843395,38846819,38850793	Gene ID= ENSG00000147526.19 TPM= 7.44 Transcript Type= protein_coding
chr8	38787190	38848132	38787190	38848132	+	transcript1349.chr8.nic@TACC1	transcript1349.chr8.nic	protein_coding	38787190,38788704,38819522,38825308,38827168,38831125,38836162,38838470,38840224,38842287,38843289,38846699,38847955	38787743,38788819,38820635,38825368,38827288,38831177,38836287,38838546,38840267,38842447,38843395,38846819,38848132	Gene ID= ENSG00000147526.19 TPM= 2.12 Transcript Type= NA
chr8	38905680	38907113	38905680	38907113	-	transcript1365.chr8.nnic@NA	transcript1365.chr8.nnic	NA	38905680	38907113	Gene ID= novel_gene_chr8_1366 TPM= 3.19 Transcript Type= NA
chr8	38951470	38958027	38951470	38958027	-	transcript1367.chr8.nnic@NA	transcript1367.chr8.nnic	NA	38957319,38953294,38952634,38951470	38958027,38953367,38952704,38952312	Gene ID= novel_gene_chr8_1368 TPM= 2.12 Transcript Type= NA
chr8	38969818	38971795	38969818	38971795	+	transcript1370.chr8.nnic@NA	transcript1370.chr8.nnic	NA	38969818	38971795	Gene ID= novel_gene_chr8_1371 TPM= 2.12 Transcript Type= NA
chr8	38990805	38996541	38990805	38996541	-	transcript1397.chr8.nic@TM2D2	transcript1397.chr8.nic	protein_coding	38996419,38995318,38993545,38990805	38996541,38995794,38993660,38991545	Gene ID= ENSG00000169490.16 TPM= 2.12 Transcript Type= NA
chr8	38988808	38996533	38988808	38996533	-	ENST00000456397.6@TM2D2	ENST00000456397.6	protein_coding	38996213,38995318,38993545,38988808	38996533,38995405,38993660,38991545	Gene ID= ENSG00000169490.16 TPM= 3.19 Transcript Type= protein_coding
chr8	38990805	38996509	38990805	38996509	-	ENST00000397070.6@TM2D2	ENST00000397070.6	protein_coding	38996213,38995318,38993545,38990805	38996509,38995794,38993660,38991545	Gene ID= ENSG00000169490.16 TPM= 4.25 Transcript Type= protein_coding
chr8	38997545	39105001	38997545	39105001	+	transcript1377.chr8.nnic@ADAM9	transcript1377.chr8.nnic	protein_coding	38997545,39007886,39011658,39013965,39016118,39017219,39018853,39021643,39023156,39025803,39026677,39041946,39054481,39055577,39071298,39077228,39082641,39082968,39090047,39091259,39101863,39103607	38997634,39007983,39011716,39014043,39016194,39017414,39018918,39021714,39023325,39025884,39026810,39042117,39054573,39055772,39071403,39077411,39082721,39083073,39090188,39091346,39101930,39105001	Gene ID= ENSG00000168615.11 TPM= 2.66 Transcript Type= NA
chr8	38996986	39105001	38996986	39105001	+	ENST00000487273.6@ADAM9	ENST00000487273.6	protein_coding	38996986,39007886,39011658,39013965,39016118,39017219,39018853,39021643,39023156,39025803,39026677,39041946,39054481,39055577,39071298,39077228,39082641,39082968,39090047,39091259,39101863,39103607	38997160,39007983,39011716,39014043,39016194,39017414,39018918,39021714,39023325,39025884,39026810,39042117,39054573,39055772,39071403,39077411,39082721,39083073,39090188,39091346,39101930,39105001	Gene ID= ENSG00000168615.11 TPM= 61.07 Transcript Type= protein_coding
chr8	40153455	40155308	40153455	40155308	+	ENST00000315792.4@C8orf4	ENST00000315792.4	protein_coding	40153455	40155308	Gene ID= ENSG00000176907.4 TPM= 2.12 Transcript Type= protein_coding
chr8	41261958	41309497	41261958	41309497	-	ENST00000220772.7@SFRP1	ENST00000220772.7	protein_coding	41308616,41303461,41261958	41309497,41303538,41265489	Gene ID= ENSG00000104332.11 TPM= 87.1 Transcript Type= protein_coding
chr8	41490482	41510980	41490482	41510980	+	ENST00000520817.5@GOLGA7	ENST00000520817.5	protein_coding	41490482,41490833,41497509,41505911,41507059,41509584	41490617,41490965,41497661,41506012,41507121,41510980	Gene ID= ENSG00000147533.16 TPM= 48.33 Transcript Type= protein_coding
chr8	41490654	41510980	41490654	41510980	+	ENST00000357743.8@GOLGA7	ENST00000357743.8	protein_coding	41490654,41497509,41505911,41507059,41509584	41490965,41497661,41506012,41507121,41510980	Gene ID= ENSG00000147533.16 TPM= 7.97 Transcript Type= protein_coding
chr8	41529206	41545046	41529206	41545046	+	ENST00000276533.3@GINS4	ENST00000276533.3	protein_coding	41529206,41530184,41536360,41537180,41539678,41539916,41541809,41541991	41529396,41530298,41536446,41537293,41539775,41540004,41541899,41545046	Gene ID= ENSG00000147536.11 TPM= 1.06 Transcript Type= protein_coding
chr8	41529221	41538036	41529221	41538036	+	ENST00000520710.5@GINS4	ENST00000520710.5	protein_coding	41529221,41536360,41537180	41530298,41536446,41538036	Gene ID= ENSG00000147536.11 TPM= 1.06 Transcript Type= protein_coding
chr8	41529237	41542402	41529237	41542402	+	ENST00000518671.5@GINS4	ENST00000518671.5	protein_coding	41529237,41530184,41536360,41537180,41539678,41539916,41541809,41541991	41529388,41530298,41536446,41537293,41539775,41540004,41541899,41542402	Gene ID= ENSG00000147536.11 TPM= 1.06 Transcript Type= protein_coding
chr8	41653220	41797622	41653220	41797622	-	ENST00000347528.8@ANK1	ENST00000347528.8	protein_coding	41797512,41758036,41733971,41727908,41727250,41725761,41724456,41723535,41723125,41719661,41718106,41717604,41716953,41715652,41714976,41714156,41708778,41706143,41704374,41704041,41702052,41701550,41699452,41698043,41696676,41696363,41695177,41694592,41693898,41693105,41692648,41690474,41690227,41688511,41688156,41686152,41684544,41672354,41668267,41663659,41661801,41653220	41797622,41758137,41734069,41728006,41727348,41725946,41724554,41723633,41723223,41719858,41718204,41717702,41717051,41715849,41715074,41714254,41708975,41706241,41704472,41704139,41702144,41701622,41699548,41698121,41696773,41696587,41695331,41694803,41694102,41693201,41692876,41690599,41690346,41688589,41688230,41686283,41684690,41672912,41668564,41663742,41661941,41655753	Gene ID= ENSG00000029534.19 TPM= 22.31 Transcript Type= protein_coding
chr8	41655324	41665277	41655324	41665277	-	transcript1438.chr8.nic@ANK1	transcript1438.chr8.nic	protein_coding	41664805,41663659,41661430,41655324	41665277,41663742,41661564,41655753	Gene ID= ENSG00000029534.19 TPM= 5.31 Transcript Type= NA
chr8	41661041	41665399	41661041	41665399	-	transcript1441.chr8.nic@ANK1	transcript1441.chr8.nic	protein_coding	41664805,41663659,41661041	41665399,41663742,41661941	Gene ID= ENSG00000029534.19 TPM= 2.12 Transcript Type= NA
chr8	41655301	41665286	41655301	41665286	-	ENST00000522543.5@ANK1	ENST00000522543.5	protein_coding	41664805,41663659,41661801,41655301	41665286,41663742,41661941,41655753	Gene ID= ENSG00000029534.19 TPM= 3.72 Transcript Type= protein_coding
chr8	41655324	41665274	41655324	41665274	-	ENST00000314214.12@ANK1	ENST00000314214.12	protein_coding	41664805,41663659,41661876,41661430,41655324	41665274,41663742,41661941,41661564,41655753	Gene ID= ENSG00000029534.19 TPM= 23.37 Transcript Type= protein_coding
chr8	41655301	41665261	41655301	41665261	-	ENST00000522231.5@ANK1	ENST00000522231.5	protein_coding	41664805,41663659,41661876,41655301	41665261,41663742,41661941,41655753	Gene ID= ENSG00000029534.19 TPM= 2.66 Transcript Type= protein_coding
chr8	41929479	42051987	41929479	42051987	-	ENST00000265713.6@KAT6A	ENST00000265713.6	protein_coding	42051901,42048378,41987455,41981839,41980846,41978642,41977008,41974704,41955296,41949222,41947751,41946591,41943748,41942793,41940842,41937256,41929479	42051987,42049302,41987563,41981954,41980927,41978777,41977327,41974822,41955411,41949363,41947912,41946684,41943979,41943000,41941444,41937568,41934867	Gene ID= ENSG00000083168.9 TPM= 2.12 Transcript Type= protein_coding
chr8	42153005	42171181	42153005	42171181	+	transcript1448.chr8.nic@AP3M2	transcript1448.chr8.nic	protein_coding	42153005,42154616,42157941,42162281,42165071,42165427,42167164,42167666,42168197,42168961	42153105,42154960,42158112,42162418,42165156,42165560,42167371,42167810,42168249,42171181	Gene ID= ENSG00000070718.11 TPM= 3.19 Transcript Type= NA
chr8	42152946	42171182	42152946	42171182	+	ENST00000518421.5@AP3M2	ENST00000518421.5	protein_coding	42152946,42154478,42154616,42157941,42162281,42165071,42165427,42167164,42167666,42168961	42153105,42154536,42154960,42158112,42162418,42165156,42165560,42167371,42167810,42171182	Gene ID= ENSG00000070718.11 TPM= 3.19 Transcript Type= protein_coding
chr8	42153011	42171182	42153011	42171182	+	ENST00000396926.7@AP3M2	ENST00000396926.7	protein_coding	42153011,42154616,42157941,42162281,42165071,42165427,42167164,42167666,42168961	42153105,42154960,42158112,42162418,42165156,42165560,42167371,42167810,42171182	Gene ID= ENSG00000070718.11 TPM= 20.18 Transcript Type= protein_coding
chr8	42175233	42207724	42175233	42207724	-	ENST00000220809.8@PLAT	ENST00000220809.8	protein_coding	42207494,42193114,42191372,42188934,42187906,42187398,42185081,42182719,42181937,42180490,42180242,42179926,42178897,42175233	42207724,42193211,42191414,42189071,42188016,42187572,42185172,42182890,42182022,42180685,42180378,42180066,42179063,42176151	Gene ID= ENSG00000104368.17 TPM= 9.03 Transcript Type= protein_coding
chr8	42175237	42207676	42175237	42207676	-	ENST00000352041.7@PLAT	ENST00000352041.7	protein_coding	42207494,42193114,42191372,42187906,42187398,42185081,42182719,42181937,42180490,42180242,42179926,42178897,42175237	42207676,42193211,42191414,42188016,42187572,42185172,42182890,42182022,42180685,42180378,42180066,42179063,42176151	Gene ID= ENSG00000104368.17 TPM= 2.66 Transcript Type= protein_coding
chr8	42271302	42331608	42271302	42331608	+	ENST00000520810.5@IKBKB	ENST00000520810.5	protein_coding	42271302,42272083,42288634,42290156,42293443,42305187,42306343,42308901,42314322,42316210,42316710,42317657,42318552,42319270,42319585,42320735,42321896,42322054,42322347,42325970,42329124,42330914	42271469,42272205,42288728,42290273,42293512,42305275,42306432,42309025,42314429,42316339,42316904,42317771,42318675,42319421,42319646,42320844,42321945,42322153,42322494,42326097,42329214,42331608	Gene ID= ENSG00000104365.13 TPM= 2.12 Transcript Type= protein_coding
chr8	42271302	42332653	42271302	42332653	+	ENST00000416505.5@IKBKB	ENST00000416505.5	protein_coding	42271302,42272083,42290156,42293443,42305187,42306343,42308901,42314322,42316210,42316710,42317657,42318552,42319270,42319585,42320735,42321896,42322054,42322347,42325970,42329124,42330914	42271469,42272205,42290273,42293512,42305275,42306432,42309025,42314429,42316339,42316904,42317771,42318675,42319421,42319646,42320844,42321945,42322153,42322494,42326097,42329214,42332653	Gene ID= ENSG00000104365.13 TPM= 1.06 Transcript Type= protein_coding
chr8	42338455	42371808	42338455	42371808	+	ENST00000265421.8@POLB	ENST00000265421.8	protein_coding	42338455,42339012,42344953,42349016,42350007,42352519,42355516,42357169,42357320,42361295,42362612,42369271,42369849,42371563	42338685,42339069,42345019,42349090,42350065,42352568,42355567,42357223,42357392,42361365,42362698,42369335,42369988,42371808	Gene ID= ENSG00000070501.11 TPM= 1.06 Transcript Type= protein_coding
chr8	42338465	42371808	42338465	42371808	+	transcript1472.chr8.nic@POLB	transcript1472.chr8.nic	protein_coding	42338465,42344953,42349016,42350007,42352519,42355516,42357169,42357320,42361295,42362612,42369271,42369849,42371563	42338685,42345019,42349090,42350065,42352568,42355567,42357223,42357392,42361365,42362698,42369335,42369988,42371808	Gene ID= ENSG00000070501.11 TPM= 6.37 Transcript Type= NA
chr8	42391903	42405897	42391903	42405897	+	ENST00000022615.8@VDAC3	ENST00000022615.8	protein_coding	42391903,42393845,42394210,42395084,42398712,42399651,42401788,42403311,42404867,42405371	42391928,42393884,42394278,42395133,42398864,42399703,42402015,42403461,42404924,42405897	Gene ID= ENSG00000078668.13 TPM= 470.54 Transcript Type= protein_coding
chr8	42416475	42541774	42416475	42541774	-	transcript1485.chr8.nnic@SLC20A2	transcript1485.chr8.nnic	protein_coding	42541538,42472102,42465777,42463005,42459896,42444646,42439450,42436989,42430064,42428758,42416475	42541774,42472654,42465917,42463090,42459992,42444762,42439653,42437577,42430249,42428842,42417967	Gene ID= ENSG00000168575.9 TPM= 50.45 Transcript Type= NA
chr8	42417464	42501460	42417464	42501460	-	ENST00000520262.5@SLC20A2	ENST00000520262.5	protein_coding	42501031,42472102,42465777,42463005,42459896,42444646,42439450,42436989,42430064,42428758,42417464	42501460,42472654,42465917,42463090,42459992,42444762,42439653,42437577,42430249,42428842,42417967	Gene ID= ENSG00000168575.9 TPM= 1.59 Transcript Type= protein_coding
chr8	42417562	42542179	42417562	42542179	-	transcript1494.chr8.nnic@SLC20A2	transcript1494.chr8.nnic	protein_coding	42541860,42472102,42465777,42463005,42459896,42444646,42439450,42436989,42430064,42428758,42417562	42542179,42472654,42465917,42463090,42459992,42444762,42439653,42437577,42430249,42428842,42417967	Gene ID= ENSG00000168575.9 TPM= 2.12 Transcript Type= NA
chr8	42416475	42501183	42416475	42501183	-	transcript1503.chr8.nnic@SLC20A2	transcript1503.chr8.nnic	protein_coding	42501031,42472102,42465777,42463005,42459896,42444646,42436989,42430064,42428758,42416475	42501183,42472654,42465917,42463090,42459992,42444762,42437577,42430249,42428842,42417967	Gene ID= ENSG00000168575.9 TPM= 22.31 Transcript Type= NA
chr8	42533655	42541750	42533655	42541750	-	transcript1533.chr8.nic@SLC20A2	transcript1533.chr8.nic	protein_coding	42541538,42533655	42541750,42535335	Gene ID= ENSG00000168575.9 TPM= 2.12 Transcript Type= NA
chr8	42504920	42505417	42504920	42505417	+	transcript1538.chr8.nnic@NA	transcript1538.chr8.nnic	NA	42504920	42505417	Gene ID= novel_gene_chr8_1539 TPM= 3.19 Transcript Type= NA
chr8	42539843	42541532	42539843	42541532	+	transcript1536.chr8.nnic@NA	transcript1536.chr8.nnic	NA	42539843	42541532	Gene ID= novel_gene_chr8_1537 TPM= 43.55 Transcript Type= NA
chr8	42541613	42552980	42541613	42552980	+	ENST00000414154.6@SMIM19	ENST00000414154.6	protein_coding	42541613,42546469,42548656,42552544	42541705,42546606,42548780,42552980	Gene ID= ENSG00000176209.11 TPM= 28.68 Transcript Type= protein_coding
chr8	42541608	42552980	42541608	42552980	+	ENST00000417410.6@SMIM19	ENST00000417410.6	protein_coding	42541608,42546469,42548656,42552544	42542373,42546606,42548780,42552980	Gene ID= ENSG00000176209.11 TPM= 22.31 Transcript Type= protein_coding
chr8	42542737	42543695	42542737	42543695	+	transcript1542.chr8.nnic@NA	transcript1542.chr8.nnic	NA	42542737	42543695	Gene ID= novel_gene_chr8_1543 TPM= 2.12 Transcript Type= NA
chr8	42836674	42843325	42836674	42843325	-	ENST00000254250.7@THAP1	ENST00000254250.7	protein_coding	42843024,42839186,42836674	42843325,42839381,42838336	Gene ID= ENSG00000131931.8 TPM= 16.46 Transcript Type= protein_coding
chr8	42836676	42843305	42836676	42843305	-	ENST00000345117.2@THAP1	ENST00000345117.2	protein_coding	42843024,42836676	42843305,42838336	Gene ID= ENSG00000131931.8 TPM= 1.59 Transcript Type= protein_coding
chr8	42861330	42896723	42861330	42896723	-	ENST00000528318.5@RNF170	ENST00000528318.5	protein_coding	42896484,42887728,42873931,42870004,42865416,42861330	42896723,42887871,42874006,42870112,42865489,42861855	Gene ID= ENSG00000120925.15 TPM= 1.06 Transcript Type= retained_intron
chr8	42896965	43022105	42896965	43022105	+	transcript1546.chr8.nnic@HOOK3	transcript1546.chr8.nnic	protein_coding	42896965,42906173,42925557,42930122,42943313,42950388,42957094,42959231,42964311,42966473,42968013,42973289,42974107,42982627,42986655,42997550,43002107,43007847,43010305,43013051,43013329,43018358,43021947	42897188,42906258,42925629,42930172,42943445,42950455,42957156,42959314,42964474,42966613,42968214,42973399,42974194,42982696,42986795,42997637,43002141,43007929,43010405,43013155,43013400,43020439,43022105	Gene ID= ENSG00000168172.8 TPM= 3.72 Transcript Type= NA
chr8	42918434	42919883	42918434	42919883	-	transcript1578.chr8.nnic@NA	transcript1578.chr8.nnic	NA	42918434	42919883	Gene ID= novel_gene_chr8_1579 TPM= 4.25 Transcript Type= NA
chr8	43056146	43085788	43056146	43085788	+	transcript1580.chr8.nnic@FNTA	transcript1580.chr8.nnic	protein_coding	43056146,43059092,43064101,43069555,43072181,43077216,43083118,43084710,43085160	43056256,43059177,43064215,43069659,43072307,43077364,43083180,43084881,43085788	Gene ID= ENSG00000168522.12 TPM= 3.9 Transcript Type= NA
chr8	43056153	43085788	43056153	43085788	+	ENST00000302279.7@FNTA	ENST00000302279.7	protein_coding	43056153,43059092,43064101,43069555,43072181,43077216,43083118,43084710,43085160	43056546,43059177,43064215,43069659,43072307,43077364,43083180,43084881,43085788	Gene ID= ENSG00000168522.12 TPM= 74 Transcript Type= protein_coding
chr8	43056302	43085788	43056302	43085788	+	transcript1586.chr8.nic@FNTA	transcript1586.chr8.nic	protein_coding	43056302,43069555,43072181,43077216,43083118,43084710,43085160	43056546,43069659,43072307,43077364,43083180,43084881,43085788	Gene ID= ENSG00000168522.12 TPM= 4.96 Transcript Type= NA
chr8	43125192	43126308	43125192	43126308	-	transcript1590.chr8.nnic@NA	transcript1590.chr8.nnic	NA	43125192	43126308	Gene ID= novel_gene_chr8_1591 TPM= 4.25 Transcript Type= NA
chr8	43140445	43143059	43140445	43143059	+	transcript1602.chr8.nnic@NA	transcript1602.chr8.nnic	NA	43140445	43143059	Gene ID= novel_gene_chr8_1603 TPM= 2.12 Transcript Type= NA
chr8	43140464	43174232	43140464	43174232	+	transcript1599.chr8.nic@HGSNAT	transcript1599.chr8.nic	protein_coding	43140464,43146948,43158575,43158923,43161438,43169173,43170585,43172310,43173713	43140614,43147063,43158711,43159044,43161507,43169242,43170694,43172386,43174232	Gene ID= ENSG00000165102.14 TPM= 3.19 Transcript Type= NA
chr8	43140455	43202855	43140455	43202855	+	ENST00000379644.8@HGSNAT	ENST00000379644.8	protein_coding	43140455,43146948,43158575,43158923,43161438,43169173,43170585,43172310,43173713,43178074,43182145,43191474,43192304,43193757,43196948,43197672,43197840,43199388	43140614,43147063,43158711,43159044,43161507,43169242,43170694,43172386,43173743,43178234,43182260,43191595,43192430,43193843,43197025,43197742,43197952,43202855	Gene ID= ENSG00000165102.14 TPM= 10.62 Transcript Type= protein_coding
chr8	47256833	47260844	47256833	47260844	-	transcript1607.chr8.nnic@NA	transcript1607.chr8.nnic	NA	47256833	47260844	Gene ID= novel_gene_chr8_1608 TPM= 3.19 Transcript Type= NA
chr8	47260575	47736306	47260575	47736306	+	ENST00000297423.8@SPIDR	ENST00000297423.8	protein_coding	47260575,47279862,47284028,47291033,47293867,47396376,47407861,47440323,47595811,47598946,47673801,47700403,47701721,47701956,47712662,47713489,47727200,47728933,47729412,47735307	47260991,47280017,47284094,47291137,47294030,47396626,47407961,47440542,47596006,47599196,47673941,47700490,47701864,47702015,47712872,47713641,47727293,47729047,47729465,47736306	Gene ID= ENSG00000164808.16 TPM= 2.12 Transcript Type= protein_coding
chr8	47735635	47738162	47735635	47738162	-	transcript1616.chr8.nnic@NA	transcript1616.chr8.nnic	NA	47735635	47738162	Gene ID= novel_gene_chr8_1617 TPM= 8.5 Transcript Type= NA
chr8	47954350	47960167	47954350	47960167	-	transcript1621.chr8.nic@PRKDC	transcript1621.chr8.nic	protein_coding	47959973,47957355,47957171,47955874,47954350	47960167,47957431,47957263,47955948,47954446	Gene ID= ENSG00000253729.7 TPM= 2.12 Transcript Type= NA
chr8	47960936	47978160	47960936	47978160	+	ENST00000262105.6@MCM4	ENST00000262105.6	protein_coding	47960936,47961516,47962053,47962305,47962764,47962945,47964574,47966187,47967365,47969798,47970511,47971341,47972857,47974734,47975715,47976686	47961214,47961680,47962216,47962406,47962859,47963040,47964712,47966407,47967485,47970057,47970876,47971468,47973064,47974962,47975848,47978160	Gene ID= ENSG00000104738.16 TPM= 2.66 Transcript Type= protein_coding
chr8	47960898	47978160	47960898	47978160	+	ENST00000523944.5@MCM4	ENST00000523944.5	protein_coding	47960898,47961131,47961516,47962053,47962305,47962764,47962945,47964574,47966187,47967365,47969798,47970511,47971341,47972857,47974734,47975715,47976686	47961014,47961214,47961680,47962216,47962406,47962859,47963040,47964712,47966407,47967485,47970057,47970876,47971468,47973064,47974962,47975848,47978160	Gene ID= ENSG00000104738.16 TPM= 4.78 Transcript Type= protein_coding
chr8	48008400	48064708	48008400	48064708	+	ENST00000523111.6@UBE2V2	ENST00000523111.6	protein_coding	48008400,48043033,48049853,48060682	48008470,48043181,48049978,48064708	Gene ID= ENSG00000169139.11 TPM= 9.56 Transcript Type= protein_coding
chr8	48917768	48921429	48917768	48921429	-	ENST00000020945.3@SNAI2	ENST00000020945.3	protein_coding	48921187,48919896,48917768	48921429,48920441,48918988	Gene ID= ENSG00000019549.9 TPM= 5.31 Transcript Type= protein_coding
chr8	51319578	51409421	51319578	51409421	-	ENST00000522628.5@PXDNL	ENST00000522628.5	protein_coding	51408067,51374597,51371873,51320784,51319578	51409421,51374731,51372081,51320897,51320022	Gene ID= ENSG00000147485.12 TPM= 19.65 Transcript Type= nonsense_mediated_decay
chr8	51319579	51809445	51319579	51809445	-	ENST00000356297.4@PXDNL	ENST00000356297.4	protein_coding	51809181,51654689,51592627,51556840,51499699,51483643,51474972,51472187,51457498,51453519,51449002,51447004,51426646,51423575,51413150,51411250,51408067,51374597,51371873,51345833,51339624,51320784,51319579	51809445,51654760,51592698,51556911,51499770,51483714,51475141,51472304,51457667,51453785,51449118,51447162,51426758,51423731,51413258,51411407,51409561,51374731,51372081,51345947,51339753,51320897,51320022	Gene ID= ENSG00000147485.12 TPM= 144.98 Transcript Type= protein_coding
chr8	51543572	51548107	51543572	51548107	+	transcript1654.chr8.nnic@NA	transcript1654.chr8.nnic	NA	51543572	51548107	Gene ID= novel_gene_chr8_1655 TPM= 3.19 Transcript Type= NA
chr8	51674025	51675809	51674025	51675809	+	transcript1656.chr8.nnic@NA	transcript1656.chr8.nnic	NA	51674025	51675809	Gene ID= novel_gene_chr8_1657 TPM= 4.25 Transcript Type= NA
chr8	51712181	51719096	51712181	51719096	-	transcript1662.chr8.nnic@NA	transcript1662.chr8.nnic	NA	51712181	51719096	Gene ID= novel_gene_chr8_1663 TPM= 3.19 Transcript Type= NA
chr8	51750190	51753953	51750190	51753953	-	transcript1664.chr8.nnic@NA	transcript1664.chr8.nnic	NA	51750190	51753953	Gene ID= novel_gene_chr8_1665 TPM= 2.12 Transcript Type= NA
chr8	51772600	51774818	51772600	51774818	+	transcript1658.chr8.nnic@NA	transcript1658.chr8.nnic	NA	51772600	51774818	Gene ID= novel_gene_chr8_1659 TPM= 2.12 Transcript Type= NA
chr8	51790186	51790814	51790186	51790814	-	transcript1666.chr8.nnic@NA	transcript1666.chr8.nnic	NA	51790186	51790814	Gene ID= novel_gene_chr8_1667 TPM= 2.12 Transcript Type= NA
chr8	51808347	51809446	51808347	51809446	-	transcript1660.chr8.nnic@NA	transcript1660.chr8.nnic	NA	51808347	51809446	Gene ID= novel_gene_chr8_1661 TPM= 5.31 Transcript Type= NA
chr8	51812969	51818424	51812969	51818424	+	transcript1686.chr8.nnic@NA	transcript1686.chr8.nnic	NA	51812969	51818424	Gene ID= novel_gene_chr8_1687 TPM= 5.66 Transcript Type= NA
chr8	51817580	51899169	51817580	51899169	-	transcript1674.chr8.nic@PCMTD1	transcript1674.chr8.nic	protein_coding	51898930,51845661,51833518,51831444,51817580	51899169,51845763,51833689,51831567,51820718	Gene ID= ENSG00000168300.13 TPM= 20 Transcript Type= NA
chr8	51842491	51899163	51842491	51899163	-	transcript1679.chr8.nic@PCMTD1	transcript1679.chr8.nic	protein_coding	51898930,51860845,51842491	51899163,51861246,51845763	Gene ID= ENSG00000168300.13 TPM= 4.25 Transcript Type= NA
chr8	51817580	51899098	51817580	51899098	-	ENST00000360540.9@PCMTD1	ENST00000360540.9	protein_coding	51898930,51870248,51860845,51845661,51833518,51831444,51817580	51899098,51870390,51861246,51845763,51833689,51831567,51820718	Gene ID= ENSG00000168300.13 TPM= 6.19 Transcript Type= protein_coding
chr8	51850883	51854890	51850883	51854890	+	transcript1682.chr8.nnic@NA	transcript1682.chr8.nnic	NA	51850883	51854890	Gene ID= novel_gene_chr8_1683 TPM= 3.19 Transcript Type= NA
chr8	51894325	51896896	51894325	51896896	+	transcript1684.chr8.nnic@NA	transcript1684.chr8.nnic	NA	51894325	51896896	Gene ID= novel_gene_chr8_1685 TPM= 3.19 Transcript Type= NA
chr8	52642537	52714499	52642537	52714499	-	transcript1691.chr8.nic@RB1CC1	transcript1691.chr8.nic	protein_coding	52714075,52686853,52685399,52683887,52683549,52676369,52673845,52668021,52661535,52661095,52660926,52660596,52658873,52657998,52656008,52645702,52642704,52642537	52714499,52686967,52685520,52684013,52683719,52676571,52674274,52668191,52661719,52661281,52661007,52660657,52658976,52658124,52657908,52645867,52642812,52642591	Gene ID= ENSG00000023287.12 TPM= 3.37 Transcript Type= NA
chr8	52642779	52714499	52642779	52714499	-	transcript1692.chr8.nic@RB1CC1	transcript1692.chr8.nic	protein_coding	52714075,52686853,52685937,52685399,52683887,52683549,52676369,52673845,52668021,52661535,52661095,52660926,52660596,52658873,52657998,52656008,52645702,52642779	52714499,52686967,52686156,52685520,52684013,52683719,52676571,52674274,52668191,52661719,52661281,52661007,52660657,52658976,52658124,52657908,52645867,52642812	Gene ID= ENSG00000023287.12 TPM= 5.84 Transcript Type= NA
chr8	52656247	52714436	52656247	52714436	-	transcript1703.chr8.nnic@RB1CC1	transcript1703.chr8.nnic	protein_coding	52714075,52686853,52685399,52683887,52683549,52676369,52673845,52668021,52661535,52661095,52660926,52660596,52658873,52657998,52656247	52714436,52686967,52685520,52684013,52683719,52676571,52674274,52668191,52661719,52661281,52661007,52660657,52658883,52658124,52657908	Gene ID= ENSG00000023287.12 TPM= 2.12 Transcript Type= NA
chr8	52722903	52723141	52722903	52723141	+	ENST00000605049.1@AC113139.1	ENST00000605049.1	sense_intronic	52722903	52723141	Gene ID= ENSG00000271555.1 TPM= 1.06 Transcript Type= sense_intronic
chr8	53511787	53514845	53511787	53514845	-	transcript1722.chr8.nnic@NA	transcript1722.chr8.nnic	NA	53511787	53514845	Gene ID= novel_gene_chr8_1723 TPM= 3.19 Transcript Type= NA
chr8	53515171	53523931	53515171	53523931	-	ENST00000426023.1@AC022034.2	ENST00000426023.1	lincRNA	53523329,53515171	53523931,53516954	Gene ID= ENSG00000237807.3 TPM= 1.06 Transcript Type= lincRNA
chr8	53522737	53523964	53522737	53523964	-	transcript1724.chr8.nnic@NA	transcript1724.chr8.nnic	NA	53522737	53523964	Gene ID= novel_gene_chr8_1725 TPM= 2.12 Transcript Type= NA
chr8	53715557	53843558	53715557	53843558	-	ENST00000355221.7@ATP6V1H	ENST00000355221.7	protein_coding	53843034,53841578,53832984,53829444,53817417,53814662,53801799,53795647,53771989,53769618,53756555,53743577,53715557	53843558,53841725,53833086,53829533,53817530,53814766,53801896,53795839,53772167,53769743,53756656,53743690,53716024	Gene ID= ENSG00000047249.17 TPM= 4.25 Transcript Type= protein_coding
chr8	53715673	53843262	53715673	53843262	-	ENST00000359530.6@ATP6V1H	ENST00000359530.6	protein_coding	53843034,53841578,53832984,53829444,53817417,53814662,53811164,53801799,53795647,53771989,53769618,53756555,53743577,53715673	53843262,53841725,53833086,53829533,53817530,53814766,53811217,53801896,53795839,53772167,53769743,53756656,53743690,53716024	Gene ID= ENSG00000047249.17 TPM= 33.99 Transcript Type= protein_coding
chr8	53715670	53743715	53715670	53743715	-	ENST00000518072.1@ATP6V1H	ENST00000518072.1	protein_coding	53743577,53715670	53743715,53716024	Gene ID= ENSG00000047249.17 TPM= 3.19 Transcript Type= retained_intron
chr8	53831789	53843259	53831789	53843259	-	ENST00000521335.1@ATP6V1H	ENST00000521335.1	protein_coding	53843034,53841578,53831789	53843259,53841725,53833086	Gene ID= ENSG00000047249.17 TPM= 1.06 Transcript Type= retained_intron
chr8	53966560	54022304	53966560	54022304	-	transcript1739.chr8.nic@TCEA1	transcript1739.chr8.nic	protein_coding	54022063,54010430,54002892,53999945,53993668,53988114,53986969,53984363,53979025,53970392,53966560	54022304,54010492,54002940,54000050,53993755,53988259,53987025,53984517,53979171,53970463,53968112	Gene ID= ENSG00000187735.13 TPM= 7.38 Transcript Type= NA
chr8	53966556	54022529	53966556	54022529	-	ENST00000521604.6@TCEA1	ENST00000521604.6	protein_coding	54022063,54010430,53999945,53993668,53988114,53986969,53984363,53979025,53970392,53966556	54022529,54010492,54000050,53993755,53988259,53987025,53984517,53979171,53970463,53968112	Gene ID= ENSG00000187735.13 TPM= 118.91 Transcript Type= protein_coding
chr8	53966552	54022448	53966552	54022448	-	ENST00000396401.7@TCEA1	ENST00000396401.7	protein_coding	54022063,53999945,53993668,53988114,53986969,53984363,53979025,53970392,53966552	54022448,54000050,53993755,53988259,53987025,53984517,53979171,53970463,53968112	Gene ID= ENSG00000187735.13 TPM= 7.38 Transcript Type= protein_coding
chr8	54046368	54101993	54046368	54101993	-	transcript1756.chr8.nnic@LYPLA1	transcript1756.chr8.nnic	protein_coding	54101755,54100908,54065788,54063328,54062254,54055060,54052655,54051012,54046368	54101993,54100939,54065813,54063375,54062324,54055133,54052756,54051188,54048118	Gene ID= ENSG00000120992.17 TPM= 3.72 Transcript Type= NA
chr8	54046368	54101970	54046368	54101970	-	transcript1763.chr8.nnic@LYPLA1	transcript1763.chr8.nnic	protein_coding	54101755,54100908,54065788,54063328,54062254,54052655,54051012,54046368	54101970,54100939,54065813,54063375,54062324,54052756,54051188,54048118	Gene ID= ENSG00000120992.17 TPM= 3.72 Transcript Type= NA
chr8	54046367	54102017	54046367	54102017	-	ENST00000316963.7@LYPLA1	ENST00000316963.7	protein_coding	54101755,54100908,54065748,54063328,54062254,54055060,54052655,54051012,54046367	54102017,54100939,54065813,54063375,54062324,54055133,54052756,54051188,54048118	Gene ID= ENSG00000120992.17 TPM= 67.45 Transcript Type= protein_coding
chr8	54135224	54147901	54135224	54147901	+	transcript1767.chr8.nnic@MRPL15	transcript1767.chr8.nnic	protein_coding	54135224,54136511,54137268,54142663,54144129,54147382	54135391,54136665,54137433,54142786,54144183,54147901	Gene ID= ENSG00000137547.8 TPM= 12.75 Transcript Type= NA
chr8	54135224	54147905	54135224	54147905	+	transcript1772.chr8.nnic@MRPL15	transcript1772.chr8.nnic	protein_coding	54135224,54136511,54137268,54142663,54144129	54135391,54136665,54137433,54142786,54147905	Gene ID= ENSG00000137547.8 TPM= 9.56 Transcript Type= NA
chr8	54135210	54147901	54135210	54147901	+	ENST00000260102.8@MRPL15	ENST00000260102.8	protein_coding	54135210,54136511,54137268,54142663,54147382	54135391,54136665,54137433,54142786,54147901	Gene ID= ENSG00000137547.8 TPM= 145.52 Transcript Type= protein_coding
chr8	54138303	54139562	54138303	54139562	-	transcript1778.chr8.nnic@NA	transcript1778.chr8.nnic	NA	54138303	54139562	Gene ID= novel_gene_chr8_1779 TPM= 22.31 Transcript Type= NA
chr8	54140576	54143946	54140576	54143946	-	transcript1776.chr8.nnic@NA	transcript1776.chr8.nnic	NA	54140576	54143946	Gene ID= novel_gene_chr8_1777 TPM= 9.56 Transcript Type= NA
chr8	54457935	54460888	54457935	54460888	+	ENST00000297316.4@SOX17	ENST00000297316.4	protein_coding	54457935,54459058	54458445,54460888	Gene ID= ENSG00000164736.5 TPM= 7.44 Transcript Type= protein_coding
chr8	55744311	55746341	55744311	55746341	-	transcript1797.chr8.nic@TMEM68	transcript1797.chr8.nic	protein_coding	55746172,55744311	55746341,55746035	Gene ID= ENSG00000167904.14 TPM= 6.37 Transcript Type= NA
chr8	55738758	55773354	55738758	55773354	-	ENST00000434581.6@TMEM68	ENST00000434581.6	protein_coding	55773269,55763936,55762635,55756244,55750964,55745061,55743481,55738758	55773354,55763980,55763028,55756411,55751157,55745121,55743620,55740218	Gene ID= ENSG00000167904.14 TPM= 1.06 Transcript Type= protein_coding
chr8	55773453	55799220	55773453	55799220	+	transcript1789.chr8.nic@TGS1	transcript1789.chr8.nic	protein_coding	55773453,55782748,55785719,55786238,55790182,55792698,55795978,55798914	55773719,55782812,55785891,55787060,55790299,55792784,55796152,55799220	Gene ID= ENSG00000137574.10 TPM= 2.12 Transcript Type= NA
chr8	55773461	55775249	55773461	55775249	+	transcript1798.chr8.nnic@NA	transcript1798.chr8.nnic	NA	55773461	55775249	Gene ID= novel_gene_chr8_1799 TPM= 2.12 Transcript Type= NA
chr8	55879813	56010572	55879813	56010572	+	ENST00000519728.5@LYN	ENST00000519728.5	protein_coding	55879813,55941855,55946448,55947618,55950459,55950681,55951966,55953832,55966715,55969717,55998346,55999418,56009908	55880103,55941991,55946493,55947723,55950557,55950784,55952115,55953984,55966897,55969793,55998499,55999549,56010572	Gene ID= ENSG00000254087.7 TPM= 1.06 Transcript Type= protein_coding
chr8	56073054	56074510	56073054	56074510	-	ENST00000521262.5@RPS20	ENST00000521262.5	protein_coding	56074254,56074060,56073695,56073054	56074510,56074159,56073768,56073272	Gene ID= ENSG00000008988.9 TPM= 3.19 Transcript Type= protein_coding
chr8	56072947	56074506	56072947	56074506	-	ENST00000009589.7@RPS20	ENST00000009589.7	protein_coding	56074381,56074060,56073695,56072947	56074506,56074159,56073768,56073272	Gene ID= ENSG00000008988.9 TPM= 1.06 Transcript Type= protein_coding
chr8	56073075	56074506	56073075	56074506	-	ENST00000519606.5@RPS20	ENST00000519606.5	protein_coding	56074381,56074060,56073075	56074506,56074159,56073272	Gene ID= ENSG00000008988.9 TPM= 1.06 Transcript Type= protein_coding
chr8	56068657	56070753	56068657	56070753	+	transcript1807.chr8.nnic@NA	transcript1807.chr8.nnic	NA	56068657	56070753	Gene ID= novel_gene_chr8_1808 TPM= 10.62 Transcript Type= NA
chr8	56189570	56191822	56189570	56191822	+	transcript1812.chr8.nnic@NA	transcript1812.chr8.nnic	NA	56189570	56191822	Gene ID= novel_gene_chr8_1813 TPM= 8.5 Transcript Type= NA
chr8	56211755	56218613	56211755	56218613	+	ENST00000355315.7@CHCHD7	ENST00000355315.7	protein_coding	56211755,56214598,56216433,56217331	56211837,56214667,56216531,56218613	Gene ID= ENSG00000170791.17 TPM= 23.37 Transcript Type= protein_coding
chr8	56211798	56218619	56211798	56218619	+	ENST00000518801.5@CHCHD7	ENST00000518801.5	protein_coding	56211798,56212762,56214598,56216389,56217331	56211837,56212889,56214667,56216531,56218619	Gene ID= ENSG00000170791.17 TPM= 2.12 Transcript Type= protein_coding
chr8	56957933	56993844	56957933	56993844	-	ENST00000262644.8@IMPAD1	ENST00000262644.8	protein_coding	56993199,56980035,56978050,56966191,56957933	56993844,56980197,56978145,56966352,56964064	Gene ID= ENSG00000104331.8 TPM= 33.99 Transcript Type= protein_coding
chr8	58411264	58451501	58411264	58451501	+	ENST00000399598.6@UBXN2B	ENST00000399598.6	protein_coding	58411264,58416850,58430519,58433160,58434395,58439633,58445907,58447389	58411469,58416953,58430669,58433243,58434504,58439770,58446068,58451501	Gene ID= ENSG00000215114.8 TPM= 24.43 Transcript Type= protein_coding
chr8	58553169	58582860	58553169	58582860	+	ENST00000260130.8@SDCBP	ENST00000260130.8	protein_coding	58553169,58565019,58570887,58572205,58575900,58578033,58579623,58580517,58581686	58553303,58565084,58570965,58572314,58576061,58578208,58579794,58580608,58582860	Gene ID= ENSG00000137575.11 TPM= 79.66 Transcript Type= protein_coding
chr8	58583504	58659844	58583504	58659844	-	ENST00000038176.7@NSMAF	ENST00000038176.7	protein_coding	58659573,58642984,58635468,58635305,58635189,58631496,58623709,58623377,58623220,58609604,58607769,58605927,58603210,58602058,58601445,58601285,58599970,58599750,58599232,58597860,58597387,58595560,58594232,58590867,58590007,58589452,58587618,58586458,58585898,58585652,58583504	58659844,58643073,58635546,58635372,58635225,58631546,58623780,58623424,58623272,58609733,58607840,58606035,58603386,58602137,58601535,58601348,58600021,58599870,58599363,58597902,58597550,58595659,58594290,58590934,58590074,58589575,58587701,58586608,58586000,58585761,58584200	Gene ID= ENSG00000035681.7 TPM= 23.37 Transcript Type= protein_coding
chr8	58659183	58661874	58659183	58661874	+	transcript1879.chr8.nnic@NA	transcript1879.chr8.nnic	NA	58659183	58661874	Gene ID= novel_gene_chr8_1880 TPM= 2.12 Transcript Type= NA
chr8	60187347	60281412	60187347	60281412	-	ENST00000317995.4@CA8	ENST00000317995.4	protein_coding	60281048,60279689,60265925,60232284,60226873,60224537,60222649,60208750,60187347	60281412,60279880,60266049,60232379,60226935,60224585,60222761,60208919,60189985	Gene ID= ENSG00000178538.9 TPM= 1.06 Transcript Type= protein_coding
chr8	60516161	60517513	60516161	60517513	-	transcript1900.chr8.nnic@NA	transcript1900.chr8.nnic	NA	60516161	60517513	Gene ID= novel_gene_chr8_1901 TPM= 2.12 Transcript Type= NA
chr8	60516955	60621999	60516955	60621999	+	transcript1885.chr8.nnic@RAB2A	transcript1885.chr8.nnic	protein_coding	60516955,60558852,60563436,60572046,60584208,60584723,60591858,60618580,60620674	60517253,60558923,60563483,60572113,60584290,60584815,60591969,60618648,60621999	Gene ID= ENSG00000104388.14 TPM= 19.12 Transcript Type= NA
chr8	60516857	60623627	60516857	60623627	+	ENST00000262646.11@RAB2A	ENST00000262646.11	protein_coding	60516857,60558852,60572046,60584208,60584723,60591858,60618580,60620674	60517253,60558923,60572113,60584290,60584815,60591969,60618648,60623627	Gene ID= ENSG00000104388.14 TPM= 24.43 Transcript Type= protein_coding
chr8	60678710	60781265	60678710	60781265	+	transcript1905.chr8.nic@CHD7	transcript1905.chr8.nic	protein_coding	60678710,60741259,60781000	60679082,60743097,60781265	Gene ID= ENSG00000171316.11 TPM= 24.25 Transcript Type= NA
chr8	60679489	60781124	60679489	60781124	+	transcript1906.chr8.nic@CHD7	transcript1906.chr8.nic	protein_coding	60679489,60741259,60781000	60679791,60743097,60781124	Gene ID= ENSG00000171316.11 TPM= 3.54 Transcript Type= NA
chr8	61501229	61714552	61501229	61714552	-	transcript1910.chr8.nic@ASPH	transcript1910.chr8.nic	protein_coding	61714269,61684039,61682439,61680968,61653568,61651050,61646750,61644600,61643945,61643386,61642888,61638322,61637947,61633683,61618978,61583944,61576772,61567168,61562744,61555924,61553031,61548071,61525977,61518032,61517528,61501229	61714552,61684188,61682483,61681036,61653660,61651124,61646878,61644632,61644001,61643433,61642920,61638363,61638003,61633727,61619019,61584029,61576858,61567318,61562880,61556022,61553120,61548208,61526112,61518123,61517661,61503509	Gene ID= ENSG00000198363.17 TPM= 3.19 Transcript Type= NA
chr8	61624537	61714651	61624537	61714651	-	transcript1922.chr8.nnic@ASPH	transcript1922.chr8.nnic	protein_coding	61714269,61684039,61680968,61668234,61653568,61651050,61646750,61644600,61643945,61643386,61642888,61638322,61637947,61633683,61624537	61714651,61684188,61681036,61668275,61653660,61651124,61646878,61644632,61644001,61643433,61642920,61638363,61638003,61633727,61626280	Gene ID= ENSG00000198363.17 TPM= 4.43 Transcript Type= NA
chr8	61624537	61689845	61624537	61689845	-	transcript1929.chr8.nnic@ASPH	transcript1929.chr8.nnic	protein_coding	61689673,61684039,61680968,61653568,61651050,61646750,61644600,61643945,61643386,61642888,61638322,61637947,61633683,61624537	61689845,61684190,61681036,61653660,61651124,61646878,61644632,61644001,61643433,61642920,61638363,61638003,61633727,61626280	Gene ID= ENSG00000198363.17 TPM= 29.39 Transcript Type= NA
chr8	61624537	61689845	61624537	61689845	-	transcript1936.chr8.nnic@ASPH	transcript1936.chr8.nnic	protein_coding	61689673,61684039,61680968,61653568,61651050,61644600,61643945,61643386,61642888,61638322,61637947,61633683,61624537	61689845,61684190,61681036,61653660,61651124,61644632,61644001,61643433,61642920,61638363,61638003,61633727,61626280	Gene ID= ENSG00000198363.17 TPM= 7.08 Transcript Type= NA
chr8	61665537	61714294	61665537	61714294	-	transcript1947.chr8.nic@ASPH	transcript1947.chr8.nic	protein_coding	61714269,61684039,61682439,61680968,61668234,61665537	61714294,61684188,61682483,61681036,61668275,61665606	Gene ID= ENSG00000198363.17 TPM= 4.25 Transcript Type= NA
chr8	61663124	61689747	61663124	61689747	-	transcript1949.chr8.nnic@ASPH	transcript1949.chr8.nnic	protein_coding	61689673,61684039,61680968,61668240,61663124	61689747,61684190,61681036,61668275,61665613	Gene ID= ENSG00000198363.17 TPM= 18.06 Transcript Type= NA
chr8	61665537	61714592	61665537	61714592	-	transcript1960.chr8.nic@ASPH	transcript1960.chr8.nic	protein_coding	61714269,61684039,61680968,61668234,61665537	61714592,61684188,61681036,61668275,61665606	Gene ID= ENSG00000198363.17 TPM= 3.19 Transcript Type= NA
chr8	61624537	61714525	61624537	61714525	-	ENST00000519234.5@ASPH	ENST00000519234.5	protein_coding	61714269,61684039,61682439,61680968,61653568,61651050,61646750,61644600,61643945,61643386,61642888,61638322,61637947,61633683,61624537	61714525,61684188,61682483,61681036,61653660,61651124,61646878,61644632,61644001,61643433,61642920,61638360,61638003,61633727,61626280	Gene ID= ENSG00000198363.17 TPM= 11.33 Transcript Type= protein_coding
chr8	61624539	61714568	61624539	61714568	-	ENST00000518068.5@ASPH	ENST00000518068.5	protein_coding	61714269,61684039,61680968,61653568,61651050,61644600,61643945,61643386,61642888,61638322,61637947,61633683,61624539	61714568,61684188,61681036,61653660,61651124,61644632,61644001,61643433,61642920,61638363,61638003,61633727,61626280	Gene ID= ENSG00000198363.17 TPM= 1.77 Transcript Type= protein_coding
chr8	61658840	61663346	61658840	61663346	-	transcript1969.chr8.nnic@NA	transcript1969.chr8.nnic	NA	61658840	61663346	Gene ID= novel_gene_chr8_1970 TPM= 6.37 Transcript Type= NA
chr8	61671077	61679965	61671077	61679965	+	transcript1965.chr8.nnic@NA	transcript1965.chr8.nnic	NA	61671077,61676858	61676380,61679965	Gene ID= novel_gene_chr8_1966 TPM= 12.75 Transcript Type= NA
chr8	63023509	63030216	63023509	63030216	-	ENST00000518113.1@GGH	ENST00000518113.1	protein_coding	63030167,63027181,63026158,63024080,63023907,63023509	63030216,63027265,63026296,63024186,63023997,63023739	Gene ID= ENSG00000137563.11 TPM= 1.06 Transcript Type= processed_transcript
chr8	63168553	63212786	63168553	63212786	+	ENST00000539294.5@YTHDF3	ENST00000539294.5	protein_coding	63168553,63169387,63175331,63186147,63209683	63168901,63169411,63175416,63187745,63212786	Gene ID= ENSG00000185728.16 TPM= 26.55 Transcript Type= protein_coding
chr8	64730230	64732926	64730230	64732926	-	transcript1981.chr8.nnic@NA	transcript1981.chr8.nnic	NA	64730230	64732926	Gene ID= novel_gene_chr8_1982 TPM= 2.12 Transcript Type= NA
chr8	65602456	65634207	65602456	65634207	-	ENST00000276569.7@ARMC1	ENST00000276569.7	protein_coding	65633998,65627216,65622263,65613244,65605422,65605263,65602456	65634207,65627433,65622354,65613433,65605538,65605337,65604585	Gene ID= ENSG00000104442.9 TPM= 7.44 Transcript Type= protein_coding
chr8	65644739	65710556	65644739	65710556	+	ENST00000262146.8@MTFR1	ENST00000262146.8	protein_coding	65644739,65669873,65682353,65693644,65704694,65707010,65707843,65708976	65644784,65670018,65682451,65693759,65704929,65707256,65708011,65710556	Gene ID= ENSG00000066855.15 TPM= 9.56 Transcript Type= protein_coding
chr8	65718379	65789084	65718379	65789084	-	ENST00000379419.8@PDE7A	ENST00000379419.8	protein_coding	65788882,65782783,65779720,65747652,65745407,65739502,65734794,65727170,65726875,65724777,65724255,65723541,65718379	65789084,65782843,65779803,65747803,65745470,65739597,65734894,65727301,65726966,65724921,65724351,65723621,65719495	Gene ID= ENSG00000205268.10 TPM= 2.12 Transcript Type= protein_coding
chr8	66127086	66174828	66127086	66174828	+	transcript2004.chr8.nnic@TRIM55	transcript2004.chr8.nnic	protein_coding	66127086,66128304,66134990,66137095,66149645,66150217,66150342,66152377,66154047,66174471	66127436,66128476,66135155,66137190,66149878,66150239,66150466,66152627,66154299,66174828	Gene ID= ENSG00000147573.16 TPM= 4.39 Transcript Type= NA
chr8	66126896	66175487	66126896	66175487	+	ENST00000315962.8@TRIM55	ENST00000315962.8	protein_coding	66126896,66128304,66134990,66137095,66149645,66150217,66150342,66152377,66154047,66174471	66127436,66128476,66135155,66137190,66149878,66150239,66150466,66152627,66154334,66175487	Gene ID= ENSG00000147573.16 TPM= 14.48 Transcript Type= protein_coding
chr8	66126896	66175485	66126896	66175485	+	ENST00000353317.9@TRIM55	ENST00000353317.9	protein_coding	66126896,66128304,66134990,66137095,66149645,66150217,66150342,66152377,66174471	66127436,66128476,66135155,66137190,66149878,66150239,66150466,66152627,66175485	Gene ID= ENSG00000147573.16 TPM= 78.21 Transcript Type= protein_coding
chr8	66161757	66163107	66161757	66163107	-	transcript2013.chr8.nnic@NA	transcript2013.chr8.nnic	NA	66161757	66163107	Gene ID= novel_gene_chr8_2014 TPM= 4.25 Transcript Type= NA
chr8	66429028	66430733	66429028	66430733	+	ENST00000320270.3@RRS1	ENST00000320270.3	protein_coding	66429028	66430733	Gene ID= ENSG00000179041.3 TPM= 74.35 Transcript Type= protein_coding
chr8	66432469	66468907	66432469	66468907	+	transcript2026.chr8.nnic@ADHFE1	transcript2026.chr8.nnic	protein_coding	66432469,66440162,66442798,66444367,66444594,66445218,66447264,66448865,66451953,66454059,66457070,66460308,66468269	66432575,66440199,66442844,66444420,66444748,66445414,66447341,66448970,66452105,66454157,66457166,66460465,66468907	Gene ID= ENSG00000147576.15 TPM= 3.19 Transcript Type= NA
chr8	66432478	66468809	66432478	66468809	+	transcript2036.chr8.nic@ADHFE1	transcript2036.chr8.nic	protein_coding	66432478,66444367,66444594,66445218,66447264,66448865,66451953,66454059,66456817,66457070,66460308,66468269	66432575,66444420,66444748,66445414,66447341,66448970,66452105,66454157,66456895,66457166,66460465,66468809	Gene ID= ENSG00000147576.15 TPM= 6.37 Transcript Type= NA
chr8	66432486	66468907	66432486	66468907	+	ENST00000396623.7@ADHFE1	ENST00000396623.7	protein_coding	66432486,66440162,66442798,66444367,66444594,66445218,66447264,66448865,66451953,66454059,66456817,66457070,66460308,66468269	66432575,66440199,66442844,66444420,66444748,66445414,66447341,66448970,66452105,66454157,66456895,66457166,66460465,66468907	Gene ID= ENSG00000147576.15 TPM= 11.68 Transcript Type= protein_coding
chr8	66432501	66468809	66432501	66468809	+	ENST00000426810.5@ADHFE1	ENST00000426810.5	protein_coding	66432501,66440162,66444367,66444594,66445218,66447264,66448865,66451953,66453710,66456817,66457070,66460308,66468269	66432575,66440199,66444420,66444748,66445414,66447341,66448970,66452105,66454157,66456895,66457166,66460465,66468809	Gene ID= ENSG00000147576.15 TPM= 1.06 Transcript Type= nonsense_mediated_decay
chr8	66432499	66468807	66432499	66468807	+	ENST00000276576.11@ADHFE1	ENST00000276576.11	protein_coding	66432499,66440162,66444367,66444594,66445218,66447264,66448865,66451953,66454059,66456817,66457070,66460308,66468269	66432575,66440199,66444420,66444748,66445414,66447341,66448970,66452105,66454157,66456895,66457166,66460465,66468807	Gene ID= ENSG00000147576.15 TPM= 10.62 Transcript Type= nonsense_mediated_decay
chr8	66432498	66468809	66432498	66468809	+	ENST00000424777.6@ADHFE1	ENST00000424777.6	protein_coding	66432498,66440162,66442798,66444367,66444594,66445218,66447264,66448865,66451953,66453710,66456817,66457070,66460308,66468269	66432575,66440199,66442844,66444420,66444748,66445414,66447341,66448970,66452105,66454157,66456895,66457166,66460465,66468809	Gene ID= ENSG00000147576.15 TPM= 2.12 Transcript Type= nonsense_mediated_decay
chr8	66613570	66614825	66613570	66614825	+	transcript2056.chr8.nnic@NA	transcript2056.chr8.nnic	NA	66613570,66614045,66614623	66613652,66614153,66614825	Gene ID= novel_gene_chr8_2057 TPM= 7.44 Transcript Type= NA
chr8	66613576	66614823	66613576	66614823	+	transcript2059.chr8.nnic@NA	transcript2059.chr8.nnic	NA	66613576	66614823	Gene ID= novel_gene_chr8_2060 TPM= 3.19 Transcript Type= NA
chr8	66628487	66667217	66628487	66667217	-	ENST00000310421.4@VCPIP1	ENST00000310421.4	protein_coding	66664249,66651458,66628487	66667217,66651544,66635372	Gene ID= ENSG00000175073.7 TPM= 6.37 Transcript Type= protein_coding
chr8	66667578	66678291	66667578	66678291	+	transcript2063.chr8.nic@C8orf44	transcript2063.chr8.nic	protein_coding	66667578,66676745,66677642	66667701,66676902,66678291	Gene ID= ENSG00000213865.7 TPM= 5.31 Transcript Type= NA
chr8	66671690	66673150	66671690	66673150	-	transcript2066.chr8.nnic@NA	transcript2066.chr8.nnic	NA	66671690	66673150	Gene ID= novel_gene_chr8_2067 TPM= 2.12 Transcript Type= NA
chr8	66712740	66860472	66712740	66860472	+	transcript2068.chr8.nnic@C8orf44-SGK3	transcript2068.chr8.nnic	protein_coding	66712740,66714801,66793616,66798542,66804375,66813853,66822372,66828654,66831254,66835763,66835943,66840003,66840211,66841024,66843452,66847193,66850831,66859411	66712833,66714856,66793832,66798625,66804447,66813928,66822459,66828703,66831311,66835846,66836074,66840115,66840247,66841110,66843547,66847348,66850920,66860472	Gene ID= ENSG00000270024.5 TPM= 2.12 Transcript Type= NA
chr8	66712418	66860859	66712418	66860859	+	ENST00000521198.6@SGK3	ENST00000521198.6	protein_coding	66712418,66793616,66798542,66804375,66813853,66822372,66828654,66831254,66835763,66835943,66840003,66840211,66841024,66843452,66847193,66850831,66859411	66712833,66793832,66798625,66804447,66813928,66822459,66828703,66831311,66835846,66836074,66840115,66840247,66841110,66843547,66847348,66850920,66860859	Gene ID= ENSG00000104205.12 TPM= 1.06 Transcript Type= protein_coding
chr8	66775181	66862020	66775181	66862020	+	ENST00000396596.2@SGK3	ENST00000396596.2	protein_coding	66775181,66793616,66798542,66804375,66813853,66822372,66828654,66831254,66835763,66835943,66840003,66840211,66841024,66843452,66847193,66850831,66859411	66775319,66793832,66798625,66804447,66813928,66822459,66828703,66831311,66835846,66836074,66840115,66840247,66841110,66843547,66847348,66850920,66862020	Gene ID= ENSG00000104205.12 TPM= 1.06 Transcript Type= protein_coding
chr8	66921818	66925596	66921818	66925596	-	ENST00000520944.5@SNHG6	ENST00000520944.5	processed_transcript	66925437,66922614,66922324,66921818	66925596,66922725,66922392,66922114	Gene ID= ENSG00000245910.8 TPM= 12.75 Transcript Type= lincRNA
chr8	66921991	66925541	66921991	66925541	-	transcript2087.chr8.nnic@NA	transcript2087.chr8.nnic	NA	66921991	66925541	Gene ID= novel_gene_chr8_2088 TPM= 4.25 Transcript Type= NA
chr8	67043079	67062158	67043079	67062158	-	transcript2089.chr8.nic@COPS5	transcript2089.chr8.nic	protein_coding	67062106,67061854,67059211,67058083,67057380,67056519,67051230,67045812,67043079	67062158,67062024,67059445,67058211,67057445,67056604,67051341,67045960,67043317	Gene ID= ENSG00000121022.13 TPM= 15.4 Transcript Type= NA
chr8	67043079	67062317	67043079	67062317	-	ENST00000357849.8@COPS5	ENST00000357849.8	protein_coding	67061854,67059211,67058083,67057380,67056519,67051230,67045812,67043079	67062317,67059445,67058211,67057445,67056604,67051341,67045960,67043317	Gene ID= ENSG00000121022.13 TPM= 106.75 Transcript Type= protein_coding
chr8	67166729	67168119	67166729	67168119	-	transcript2098.chr8.nnic@NA	transcript2098.chr8.nnic	NA	67166729	67168119	Gene ID= novel_gene_chr8_2099 TPM= 6.37 Transcript Type= NA
chr8	67197674	67206434	67197674	67206434	-	transcript2109.chr8.nic@ARFGEF1	transcript2109.chr8.nic	protein_coding	67204680,67203083,67201467,67197674	67206434,67203251,67201605,67200513	Gene ID= ENSG00000066777.8 TPM= 6.37 Transcript Type= NA
chr8	67343975	67345087	67343975	67345087	+	ENST00000607397.1@AC021321.1	ENST00000607397.1	lincRNA	67343975	67345087	Gene ID= ENSG00000271966.1 TPM= 1.06 Transcript Type= lincRNA
chr8	69492793	69660055	69492793	69660055	+	ENST00000419716.7@SULF1	ENST00000419716.7	protein_coding	69492793,69501874,69563539,69563916,69575970,69586357,69588972,69600603,69601654,69603192,69603600,69604803,69621035,69623942,69627210,69627772,69628171,69629504,69638502,69638735,69640808,69658505	69493125,69501968,69563611,69564147,69576209,69586508,69589141,69600753,69601829,69603320,69603656,69604932,69621251,69624197,69627306,69627866,69628236,69629679,69638644,69638858,69640841,69660055	Gene ID= ENSG00000137573.13 TPM= 10.62 Transcript Type= protein_coding
chr8	69672339	69834714	69672339	69834714	-	transcript2127.chr8.nnic@SLCO5A1	transcript2127.chr8.nnic	protein_coding	69834513,69831767,69761743,69755424,69738040,69705031,69682184,69679378,69676609,69672339	69834714,69833169,69761875,69755641,69738204,69705229,69682343,69679619,69676673,69673326	Gene ID= ENSG00000137571.10 TPM= 8.5 Transcript Type= NA
chr8	69755533	69835085	69755533	69835085	-	transcript2138.chr8.nic@SLCO5A1	transcript2138.chr8.nic	protein_coding	69834854,69831767,69761743,69755533	69835085,69833169,69761875,69755641	Gene ID= ENSG00000137571.10 TPM= 11.15 Transcript Type= NA
chr8	69755533	69833746	69755533	69833746	-	transcript2139.chr8.nic@SLCO5A1	transcript2139.chr8.nic	protein_coding	69831767,69761743,69755533	69833746,69761875,69755641	Gene ID= ENSG00000137571.10 TPM= 7.97 Transcript Type= NA
chr8	69834129	69837829	69834129	69837829	+	ENST00000528800.2@AC079089.1	ENST00000528800.2	antisense_RNA	69834129,69836639	69834193,69837829	Gene ID= ENSG00000246528.3 TPM= 6.37 Transcript Type= antisense_RNA
chr8	70390115	70395976	70390115	70395976	-	transcript2145.chr8.nnic@NA	transcript2145.chr8.nnic	NA	70390115	70395976	Gene ID= novel_gene_chr8_2146 TPM= 2.12 Transcript Type= NA
chr8	70573442	70607778	70573442	70607778	-	ENST00000521425.5@TRAM1	ENST00000521425.5	protein_coding	70606877,70600019,70598134,70597895,70596263,70594506,70587106,70586895,70583650,70583164,70573442	70607778,70600082,70598255,70598011,70596321,70594590,70587176,70586999,70583793,70583324,70575005	Gene ID= ENSG00000067167.7 TPM= 7.97 Transcript Type= protein_coding
chr8	70594501	70608423	70594501	70608423	-	transcript2158.chr8.nic@TRAM1	transcript2158.chr8.nic	protein_coding	70608077,70600019,70598134,70597895,70596263,70594501	70608423,70600082,70598255,70598011,70596321,70594590	Gene ID= ENSG00000067167.7 TPM= 3.19 Transcript Type= NA
chr8	70573442	70608369	70573442	70608369	-	ENST00000262213.6@TRAM1	ENST00000262213.6	protein_coding	70608077,70600019,70598134,70597895,70596263,70594506,70587106,70586895,70583650,70583164,70573442	70608369,70600082,70598255,70598011,70596321,70594590,70587176,70586999,70583793,70583324,70575005	Gene ID= ENSG00000067167.7 TPM= 100.37 Transcript Type= protein_coding
chr8	70637256	70669157	70637256	70669157	-	ENST00000276590.4@LACTB2	ENST00000276590.4	protein_coding	70668999,70661734,70657756,70644065,70640902,70638548,70637256	70669157,70661897,70657882,70644243,70641050,70638629,70637903	Gene ID= ENSG00000147592.8 TPM= 7.44 Transcript Type= protein_coding
chr8	71841549	71844468	71841549	71844468	-	ENST00000325509.4@MSC	ENST00000325509.4	protein_coding	71843645,71841549	71844468,71842747	Gene ID= ENSG00000178860.8 TPM= 9.56 Transcript Type= protein_coding
chr8	73008864	73046471	73008864	73046471	+	ENST00000276603.9@TERF1	ENST00000276603.9	protein_coding	73008864,73013895,73020684,73022216,73024822,73026940,73030336,73032042,73039116,73045961	73009205,73013990,73020805,73022302,73024971,73027052,73030395,73032133,73039219,73046471	Gene ID= ENSG00000147601.13 TPM= 2.12 Transcript Type= protein_coding
chr8	73052178	73063061	73052178	73063061	+	ENST00000517664.1@AC022893.1	ENST00000517664.1	antisense_RNA	73052178,73062939	73055603,73063061	Gene ID= ENSG00000253636.1 TPM= 1.06 Transcript Type= antisense_RNA
chr8	73064540	73093272	73064540	73093272	-	ENST00000297354.6@SBSPON	ENST00000297354.6	protein_coding	73092854,73081019,73071780,73069805,73064540	73093272,73081213,73071870,73069981,73067458	Gene ID= ENSG00000164764.10 TPM= 1.06 Transcript Type= protein_coding
chr8	73290639	73293898	73290639	73293898	-	ENST00000352983.6@RPL7	ENST00000352983.6	protein_coding	73293599,73292689,73292239,73291773,73291552,73291043,73290639	73293898,73292797,73292405,73291910,73291661,73291252,73290705	Gene ID= ENSG00000147604.13 TPM= 838.04 Transcript Type= protein_coding
chr8	73420369	73746868	73420369	73746868	-	transcript2184.chr8.nic@STAU2	transcript2184.chr8.nic	protein_coding	73746783,73739756,73738284,73709032,73688654,73673107,73617292,73615675,73613744,73603726,73595166,73582770,73552012,73527691,73422614,73420369	73746868,73739868,73738349,73709162,73688813,73673242,73617451,73615782,73613956,73603863,73595297,73582830,73552319,73527804,73422702,73421465	Gene ID= ENSG00000040341.17 TPM= 4.89 Transcript Type= NA
chr8	73420369	73746927	73420369	73746927	-	transcript2186.chr8.nic@STAU2	transcript2186.chr8.nic	protein_coding	73746783,73739756,73738284,73688654,73673107,73617292,73615675,73613744,73603726,73595166,73582770,73552012,73527691,73422614,73420369	73746927,73739868,73738349,73688813,73673242,73617451,73615782,73613956,73603863,73595297,73582830,73552319,73527804,73422702,73421465	Gene ID= ENSG00000040341.17 TPM= 9.32 Transcript Type= NA
chr8	73420371	73746937	73420371	73746937	-	ENST00000524300.5@STAU2	ENST00000524300.5	protein_coding	73746783,73739756,73738284,73709032,73688654,73673107,73617292,73615675,73613744,73603726,73595166,73582770,73552012,73422614,73420371	73746937,73739868,73738349,73709162,73688813,73673242,73617451,73615782,73613956,73603863,73595297,73582830,73552319,73422702,73421465	Gene ID= ENSG00000040341.17 TPM= 4.17 Transcript Type= protein_coding
chr8	73420369	73746927	73420369	73746927	-	transcript2191.chr8.nic@STAU2	transcript2191.chr8.nic	protein_coding	73746783,73739756,73738284,73688654,73673107,73617292,73615675,73613744,73603726,73595166,73582770,73552012,73422614,73420369	73746927,73739868,73738349,73688813,73673242,73617451,73615782,73613956,73603863,73595297,73582830,73552319,73422702,73421465	Gene ID= ENSG00000040341.17 TPM= 8.07 Transcript Type= NA
chr8	73526835	73746927	73526835	73746927	-	transcript2192.chr8.nic@STAU2	transcript2192.chr8.nic	protein_coding	73746783,73739756,73738284,73709032,73688654,73673107,73617292,73615675,73613744,73603726,73595166,73582770,73552012,73526835	73746927,73739868,73738349,73709162,73688813,73673242,73617451,73615782,73613956,73603863,73595297,73582830,73552319,73527804	Gene ID= ENSG00000040341.17 TPM= 4.16 Transcript Type= NA
chr8	73420369	73746841	73420369	73746841	-	transcript2194.chr8.nic@STAU2	transcript2194.chr8.nic	protein_coding	73746783,73688654,73673107,73617292,73615675,73613744,73603726,73595166,73582770,73552012,73527691,73422614,73420369	73746841,73688813,73673242,73617451,73615782,73613956,73603863,73595297,73582830,73552319,73527804,73422702,73421465	Gene ID= ENSG00000040341.17 TPM= 4.54 Transcript Type= NA
chr8	73526835	73746866	73526835	73746866	-	transcript2197.chr8.nic@STAU2	transcript2197.chr8.nic	protein_coding	73746783,73739756,73738284,73688654,73673107,73617292,73615675,73613744,73603726,73595166,73582770,73552012,73526835	73746866,73739868,73738349,73688813,73673242,73617451,73615782,73613956,73603863,73595297,73582830,73552319,73527804	Gene ID= ENSG00000040341.17 TPM= 11.77 Transcript Type= NA
chr8	73526835	73746841	73526835	73746841	-	transcript2202.chr8.nic@STAU2	transcript2202.chr8.nic	protein_coding	73746783,73688654,73673107,73617292,73615675,73613744,73603726,73595166,73582770,73552012,73526835	73746841,73688813,73673242,73617451,73615782,73613956,73603863,73595297,73582830,73552319,73527804	Gene ID= ENSG00000040341.17 TPM= 2.74 Transcript Type= NA
chr8	73526835	73746867	73526835	73746867	-	transcript2207.chr8.nic@STAU2	transcript2207.chr8.nic	protein_coding	73746783,73617292,73615675,73613744,73603726,73595166,73582770,73552012,73526835	73746867,73617451,73615782,73613956,73603863,73595297,73582830,73552319,73527804	Gene ID= ENSG00000040341.17 TPM= 2.39 Transcript Type= NA
chr8	73421130	73746840	73421130	73746840	-	ENST00000523558.5@STAU2	ENST00000523558.5	protein_coding	73746783,73617292,73615675,73613744,73603726,73595166,73582770,73552012,73422614,73421130	73746840,73617451,73615782,73613956,73603863,73595297,73582830,73552319,73422702,73421465	Gene ID= ENSG00000040341.17 TPM= 1.06 Transcript Type= protein_coding
chr8	73549604	73746840	73549604	73746840	-	ENST00000355780.9@STAU2	ENST00000355780.9	protein_coding	73746783,73739756,73738284,73688654,73673107,73617292,73615675,73613744,73603726,73595166,73582770,73549604	73746840,73739868,73738349,73688813,73673242,73617451,73615782,73613956,73603863,73595297,73582830,73552319	Gene ID= ENSG00000040341.17 TPM= 2.12 Transcript Type= protein_coding
chr8	73792363	73878909	73792363	73878909	-	ENST00000419880.7@UBE2W	ENST00000419880.7	protein_coding	73878808,73870269,73830381,73825147,73810474,73805651,73792363	73878909,73870301,73830472,73825249,73810629,73805726,73794115	Gene ID= ENSG00000104343.19 TPM= 2.66 Transcript Type= protein_coding
chr8	73786220	73878910	73786220	73878910	-	ENST00000517608.5@UBE2W	ENST00000517608.5	protein_coding	73878808,73830381,73825147,73810474,73805651,73786220	73878910,73830472,73825249,73810629,73805726,73794115	Gene ID= ENSG00000104343.19 TPM= 10.62 Transcript Type= protein_coding
chr8	73790605	73878875	73790605	73878875	-	ENST00000422906.6@UBE2W	ENST00000422906.6	protein_coding	73878808,73830381,73810474,73805651,73790605	73878875,73830472,73810629,73805726,73794115	Gene ID= ENSG00000104343.19 TPM= 5.31 Transcript Type= nonsense_mediated_decay
chr8	73792360	73878825	73792360	73878825	-	ENST00000602593.5@UBE2W	ENST00000602593.5	protein_coding	73878808,73830381,73825147,73810474,73805651,73792360	73878825,73830472,73825249,73810629,73805726,73794115	Gene ID= ENSG00000104343.19 TPM= 5.84 Transcript Type= protein_coding
chr8	73804149	73805478	73804149	73805478	+	transcript2225.chr8.nnic@NA	transcript2225.chr8.nnic	NA	73804149	73805478	Gene ID= novel_gene_chr8_2226 TPM= 3.19 Transcript Type= NA
chr8	73866825	73868717	73866825	73868717	+	transcript2227.chr8.nnic@NA	transcript2227.chr8.nnic	NA	73866825	73868717	Gene ID= novel_gene_chr8_2228 TPM= 2.12 Transcript Type= NA
chr8	73945617	73972247	73945617	73972247	-	ENST00000520242.5@ELOC	ENST00000520242.5	protein_coding	73972077,73959765,73955911,73945617	73972247,73959818,73956054,73946820	Gene ID= ENSG00000154582.16 TPM= 7.44 Transcript Type= protein_coding
chr8	73976209	73982783	73976209	73982783	+	ENST00000312184.5@TMEM70	ENST00000312184.5	protein_coding	73976209,73978756,73981155	73976491,73978861,73982783	Gene ID= ENSG00000175606.10 TPM= 2.12 Transcript Type= protein_coding
chr8	73991352	74029087	73991352	74029087	+	ENST00000284818.6@LY96	ENST00000284818.6	protein_coding	73991352,74004796,74010001,74026789,74028956	73991554,74004885,74010129,74026841,74029087	Gene ID= ENSG00000154589.6 TPM= 5.31 Transcript Type= protein_coding
chr8	73991426	74029074	73991426	74029074	+	ENST00000518893.1@LY96	ENST00000518893.1	protein_coding	73991426,74010001,74026789,74028956	73991554,74010129,74026841,74029074	Gene ID= ENSG00000154589.6 TPM= 1.06 Transcript Type= protein_coding
chr8	74234704	74321582	74234704	74321582	-	transcript2264.chr8.nnic@JPH1	transcript2264.chr8.nnic	protein_coding	74320909,74314861,74259385,74244529,74237208,74234704	74321582,74315620,74259503,74245175,74237303,74236609	Gene ID= ENSG00000104369.4 TPM= 13.46 Transcript Type= NA
chr8	74234704	74321582	74234704	74321582	-	transcript2265.chr8.nnic@JPH1	transcript2265.chr8.nnic	protein_coding	74320909,74314861,74259385,74244529,74237208,74234704	74321582,74315620,74259503,74245175,74237303,74236755	Gene ID= ENSG00000104369.4 TPM= 15.58 Transcript Type= NA
chr8	74234702	74321582	74234702	74321582	-	transcript2266.chr8.nic@JPH1	transcript2266.chr8.nic	protein_coding	74320909,74314861,74259385,74244529,74234702	74321582,74315620,74259503,74245175,74237303	Gene ID= ENSG00000104369.4 TPM= 8.15 Transcript Type= NA
chr8	74350382	74366876	74350382	74366876	+	ENST00000220822.11@GDAP1	ENST00000220822.11	protein_coding	74350382,74351274,74360137,74361884,74362939,74363985	74350578,74351466,74360310,74361978,74363053,74366876	Gene ID= ENSG00000104381.12 TPM= 3.19 Transcript Type= protein_coding
chr8	76982957	77000267	76982957	77000267	-	ENST00000522527.5@PEX2	ENST00000522527.5	protein_coding	76999990,76986187,76982957	77000267,76986296,76984195	Gene ID= ENSG00000164751.14 TPM= 8.5 Transcript Type= protein_coding
chr8	76982934	77000947	76982934	77000947	-	ENST00000520103.5@PEX2	ENST00000520103.5	protein_coding	77000883,76999990,76982934	77000947,77000132,76984195	Gene ID= ENSG00000164751.14 TPM= 3.19 Transcript Type= protein_coding
chr8	78516338	78603185	78516338	78603185	+	transcript2281.chr8.nnic@PKIA	transcript2281.chr8.nnic	protein_coding	78516338,78567481,78572811,78598358,78601742	78516468,78567594,78572939,78598535,78603185	Gene ID= ENSG00000171033.12 TPM= 7.44 Transcript Type= NA
chr8	78516139	78605267	78516139	78605267	+	ENST00000396418.6@PKIA	ENST00000396418.6	protein_coding	78516139,78572811,78598358,78601742	78516468,78572939,78598535,78605267	Gene ID= ENSG00000171033.12 TPM= 45.67 Transcript Type= protein_coding
chr8	78516355	78603185	78516355	78603185	+	ENST00000352966.9@PKIA	ENST00000352966.9	protein_coding	78516355,78598358,78601742	78516468,78598535,78603185	Gene ID= ENSG00000171033.12 TPM= 31.86 Transcript Type= protein_coding
chr8	78666047	78719765	78666047	78719765	+	ENST00000263849.8@ZC2HC1A	ENST00000263849.8	protein_coding	78666047,78675787,78678563,78686467,78689222,78697407,78698414,78715221,78717328	78666164,78675863,78678679,78686608,78689373,78697506,78698513,78715328,78719765	Gene ID= ENSG00000104427.11 TPM= 5.31 Transcript Type= protein_coding
chr8	79764009	79767832	79764009	79767832	-	transcript2314.chr8.nnic@NA	transcript2314.chr8.nnic	NA	79764009	79767832	Gene ID= novel_gene_chr8_2315 TPM= 2.12 Transcript Type= NA
chr8	79764010	79767863	79764010	79767863	-	ENST00000354724.7@HEY1	ENST00000354724.7	protein_coding	79767575,79767219,79767009,79766651,79764010	79767863,79767294,79767092,79766732,79765771	Gene ID= ENSG00000164683.16 TPM= 24.43 Transcript Type= protein_coding
chr8	79764013	79767857	79764013	79767857	-	ENST00000337919.9@HEY1	ENST00000337919.9	protein_coding	79767575,79767219,79766997,79766651,79764013	79767857,79767294,79767092,79766732,79765771	Gene ID= ENSG00000164683.16 TPM= 7.44 Transcript Type= protein_coding
chr8	79918717	80030288	79918717	80030288	-	transcript2320.chr8.nnic@MRPS28	transcript2320.chr8.nnic	protein_coding	80030021,80002999,79918717	80030288,80003180,79919148	Gene ID= ENSG00000147586.9 TPM= 6.37 Transcript Type= NA
chr8	79918717	80030290	79918717	80030290	-	transcript2322.chr8.nnic@MRPS28	transcript2322.chr8.nnic	protein_coding	80030054,80002999,79918717	80030290,80003180,79919148	Gene ID= ENSG00000147586.9 TPM= 6.37 Transcript Type= NA
chr8	79918855	80030276	79918855	80030276	-	transcript2323.chr8.nnic@MRPS28	transcript2323.chr8.nnic	protein_coding	80030036,80002999,79918855	80030276,80003120,79919148	Gene ID= ENSG00000147586.9 TPM= 2.12 Transcript Type= NA
chr8	79918717	80030271	79918717	80030271	-	ENST00000276585.8@MRPS28	ENST00000276585.8	protein_coding	80030036,80002999,79918717	80030271,80003180,79919148	Gene ID= ENSG00000147586.9 TPM= 32.93 Transcript Type= protein_coding
chr8	80036591	80171610	80036591	80171610	-	transcript2330.chr8.nnic@TPD52	transcript2330.chr8.nnic	protein_coding	80171425,80064478,80053282,80051527,80051252,80050445,80042620,80036591	80171610,80064593,80053430,80051628,80051270,80050471,80042668,80038235	Gene ID= ENSG00000076554.15 TPM= 12.21 Transcript Type= NA
chr8	80486213	80521772	80486213	80521772	+	ENST00000455036.7@ZBTB10	ENST00000455036.7	protein_coding	80486213,80499494,80513910,80518403,80518782,80519223	80487782,80500382,80514008,80518579,80518954,80521772	Gene ID= ENSG00000205189.11 TPM= 12.75 Transcript Type= protein_coding
chr8	80636499	80874439	80636499	80874439	-	transcript2353.chr8.nnic@ZNF704	transcript2353.chr8.nnic	protein_coding	80873544,80821374,80693004,80687226,80670503,80664815,80659585,80643035,80640526,80636499	80874439,80821615,80693107,80687458,80670603,80665082,80659689,80643129,80641477,80636811	Gene ID= ENSG00000164684.13 TPM= 4.78 Transcript Type= NA
chr8	80640198	80874439	80640198	80874439	-	transcript2355.chr8.nic@ZNF704	transcript2355.chr8.nic	protein_coding	80873544,80821374,80693004,80687226,80670503,80664815,80659585,80643035,80640198	80874439,80821615,80693107,80687458,80670603,80665082,80659689,80643129,80641477	Gene ID= ENSG00000164684.13 TPM= 4.78 Transcript Type= NA
chr8	80637701	80643544	80637701	80643544	-	transcript2358.chr8.nic@ZNF704	transcript2358.chr8.nic	protein_coding	80643035,80637701	80643544,80641477	Gene ID= ENSG00000164684.13 TPM= 9.56 Transcript Type= NA
chr8	81280363	81284777	81280363	81284777	+	ENST00000297258.10@FABP5	ENST00000297258.10	protein_coding	81280363,81283366,81283873,81284514	81280674,81283538,81283974,81284777	Gene ID= ENSG00000164687.10 TPM= 37.18 Transcript Type= protein_coding
chr8	81281132	81284777	81281132	81284777	+	transcript2366.chr8.nnic@NA	transcript2366.chr8.nnic	NA	81281132	81284777	Gene ID= novel_gene_chr8_2367 TPM= 2.12 Transcript Type= NA
chr8	81478699	81483233	81478699	81483233	-	ENST00000522659.1@FABP4	ENST00000522659.1	protein_coding	81483099,81480426,81479414,81478699	81483233,81480598,81479515,81478915	Gene ID= ENSG00000170323.8 TPM= 76.48 Transcript Type= nonsense_mediated_decay
chr8	81657961	81686693	81657961	81686693	-	ENST00000256108.9@IMPA1	ENST00000256108.9	protein_coding	81686252,81681498,81680650,81679126,81676234,81673841,81670939,81660516,81657961	81686693,81681584,81680783,81679230,81676279,81673949,81671047,81660667,81659466	Gene ID= ENSG00000133731.9 TPM= 29.74 Transcript Type= protein_coding
chr8	81701723	81721300	81701723	81721300	-	ENST00000220669.9@ZFAND1	ENST00000220669.9	protein_coding	81721227,81718182,81717249,81714987,81714804,81713918,81702969,81701723	81721300,81718224,81717288,81715114,81714895,81714039,81703124,81702865	Gene ID= ENSG00000104231.10 TPM= 11.68 Transcript Type= protein_coding
chr8	81701722	81721314	81701722	81721314	-	transcript2381.chr8.nic@ZFAND1	transcript2381.chr8.nic	protein_coding	81721249,81718182,81717249,81714987,81714804,81713918,81702969,81701722	81721314,81718224,81717288,81715114,81714895,81714039,81703124,81702865	Gene ID= ENSG00000104231.10 TPM= 3.19 Transcript Type= NA
chr8	81701765	81721289	81701765	81721289	-	ENST00000522520.5@ZFAND1	ENST00000522520.5	protein_coding	81721227,81718182,81714987,81714804,81713918,81702969,81701765	81721289,81718224,81715114,81714895,81714039,81703124,81702865	Gene ID= ENSG00000104231.10 TPM= 5.31 Transcript Type= protein_coding
chr8	81702914	81721263	81702914	81721263	-	ENST00000517588.5@ZFAND1	ENST00000517588.5	protein_coding	81721227,81718182,81714987,81714804,81713918,81702914	81721263,81718224,81715114,81714895,81714039,81703124	Gene ID= ENSG00000104231.10 TPM= 1.06 Transcript Type= protein_coding
chr8	81732434	81759515	81732434	81759515	+	ENST00000297265.4@CHMP4C	ENST00000297265.4	protein_coding	81732434,81753064,81755370,81758142,81758480	81732816,81753241,81755484,81758295,81759515	Gene ID= ENSG00000164695.4 TPM= 6.37 Transcript Type= protein_coding
chr8	81799587	81842286	81799587	81842286	-	ENST00000396330.6@SNX16	ENST00000396330.6	protein_coding	81842122,81840198,81839612,81829430,81823792,81815325,81803092,81802380,81799587	81842286,81840443,81840082,81829516,81823940,81815394,81803228,81802499,81801593	Gene ID= ENSG00000104497.13 TPM= 2.12 Transcript Type= protein_coding
chr8	85107147	85146076	85107147	85146076	+	ENST00000360375.7@LRRCC1	ENST00000360375.7	protein_coding	85107147,85109595,85110115,85112932,85115100,85115375,85123413,85124792,85126689,85129175,85129919,85131760,85134847,85135789,85137464,85138035,85138338,85141382,85145389	85107399,85109800,85110180,85113099,85115275,85115584,85123606,85124939,85126837,85129379,85130058,85131961,85135032,85135963,85137627,85138243,85138475,85141517,85146076	Gene ID= ENSG00000133739.15 TPM= 4.25 Transcript Type= protein_coding
chr8	85107238	85138074	85107238	85138074	+	ENST00000517875.5@LRRCC1	ENST00000517875.5	protein_coding	85107238,85110115,85112932,85115100,85115375,85123413,85124792,85126689,85129175,85129919,85131760,85134847,85135789,85137464,85138035	85107399,85110180,85113099,85115275,85115584,85123606,85124939,85126837,85129379,85130058,85131961,85135032,85135963,85137627,85138074	Gene ID= ENSG00000133739.15 TPM= 1.06 Transcript Type= nonsense_mediated_decay
chr8	85214502	85220375	85214502	85220375	-	ENST00000612809.4@C8orf59	ENST00000612809.4	protein_coding	85220306,85219323,85217386,85214921,85214502	85220375,85219363,85217502,85215037,85214631	Gene ID= ENSG00000176731.11 TPM= 9.56 Transcript Type= protein_coding
chr8	85245527	85284073	85245527	85284073	+	ENST00000321764.3@CA13	ENST00000321764.3	protein_coding	85245527,85250740,85259421,85266608,85267902,85268472,85281230	85245865,85250937,85259539,85266703,85267964,85268627,85284073	Gene ID= ENSG00000185015.7 TPM= 1.06 Transcript Type= protein_coding
chr8	85328230	85378113	85328230	85378113	-	ENST00000523022.5@CA1	ENST00000523022.5	protein_coding	85378046,85341599,85338252,85336945,85333525,85332490,85329689,85328230	85378113,85341659,85338449,85337063,85333620,85332552,85329844,85328676	Gene ID= ENSG00000133742.13 TPM= 3.19 Transcript Type= protein_coding
chr8	85438827	85449040	85438827	85449040	+	ENST00000285381.2@CA3	ENST00000285381.2	protein_coding	85438827,85439712,85442073,85444034,85445156,85446142,85448034	85438943,85439909,85442191,85444126,85445218,85446297,85449040	Gene ID= ENSG00000164879.6 TPM= 718.02 Transcript Type= protein_coding
chr8	85440541	85463839	85440541	85463839	-	transcript2431.chr8.nic@CA3-AS1	transcript2431.chr8.nic	antisense_RNA	85462932,85462736,85440541	85463839,85462801,85442237	Gene ID= ENSG00000253549.5 TPM= 2.12 Transcript Type= NA
chr8	85456489	85463838	85456489	85463838	-	transcript2439.chr8.nnic@CA3-AS1	transcript2439.chr8.nnic	antisense_RNA	85463178,85462736,85456489	85463838,85462801,85456863	Gene ID= ENSG00000253549.5 TPM= 6.37 Transcript Type= NA
chr8	85463852	85481493	85463852	85481493	+	ENST00000285379.9@CA2	ENST00000285379.9	protein_coding	85463852,85465272,85473693,85474324,85475798,85477120,85480670	85464115,85465469,85473811,85474416,85475860,85477275,85481493	Gene ID= ENSG00000104267.9 TPM= 35.05 Transcript Type= protein_coding
chr8	86342573	86467952	86342573	86467952	+	transcript2453.chr8.nnic@WWP1	transcript2453.chr8.nnic	protein_coding	86342573,86374030,86380726,86381505,86398342,86398572,86402019,86411538,86425223,86427643,86430697,86431406,86431615,86435452,86435633,86438585,86442619,86448148,86448373,86452559,86457921,86461224,86461774,86466794	86342930,86374120,86380864,86381629,86398479,86398638,86402203,86411874,86425318,86427817,86430751,86431490,86431743,86435527,86435704,86438673,86442778,86448281,86448513,86452679,86458025,86461320,86461846,86467952	Gene ID= ENSG00000123124.13 TPM= 9.56 Transcript Type= NA
chr8	86342714	86467476	86342714	86467476	+	transcript2459.chr8.nnic@WWP1	transcript2459.chr8.nnic	protein_coding	86342714,86374030,86380726,86381505,86402019,86411538,86425223,86427643,86430697,86431406,86431615,86435452,86435633,86438585,86442619,86448148,86448373,86452559,86457921,86461224,86461774,86466794	86342930,86374120,86380864,86381629,86402203,86411874,86425318,86427817,86430751,86431490,86431743,86435527,86435704,86438673,86442778,86448281,86448513,86452679,86458025,86461320,86461846,86467476	Gene ID= ENSG00000123124.13 TPM= 2.12 Transcript Type= NA
chr8	86351507	86352883	86351507	86352883	-	transcript2467.chr8.nnic@NA	transcript2467.chr8.nnic	NA	86351507	86352883	Gene ID= novel_gene_chr8_2468 TPM= 2.12 Transcript Type= NA
chr8	86472350	86508780	86472350	86508780	-	ENST00000406452.7@RMDN1	ENST00000406452.7	protein_coding	86508492,86506995,86488552,86486484,86484872,86480277,86478923,86477294,86474820,86472350	86508780,86507112,86488639,86486643,86484961,86480332,86479010,86477324,86474953,86474358	Gene ID= ENSG00000176623.11 TPM= 90.28 Transcript Type= protein_coding
chr8	86514427	86561498	86514427	86561498	+	ENST00000517490.5@CPNE3	ENST00000517490.5	protein_coding	86514427,86515462,86528536,86528945,86531155,86532509,86537563,86540245,86544740,86546595,86547711,86548301,86551046,86551183,86554851,86556102,86558288	86514541,86515499,86528677,86529124,86531229,86532580,86537646,86540334,86544838,86546681,86547770,86548434,86551100,86551234,86554984,86556338,86561498	Gene ID= ENSG00000085719.12 TPM= 32.93 Transcript Type= protein_coding
chr8	86514423	86561411	86514423	86561411	+	transcript2498.chr8.nic@CPNE3	transcript2498.chr8.nic	protein_coding	86514423,86528536,86528945,86531155,86532509,86537563,86540245,86544740,86546595,86547711,86548301,86551046,86551183,86554851,86556102,86558288	86514541,86528677,86529124,86531229,86532580,86537646,86540334,86544838,86546681,86547770,86548434,86551100,86551234,86554984,86556338,86561411	Gene ID= ENSG00000085719.12 TPM= 3.19 Transcript Type= NA
chr8	86514437	86544808	86514437	86544808	+	ENST00000621783.4@CPNE3	ENST00000621783.4	protein_coding	86514437,86528536,86528945,86531155,86532509,86537563,86540245,86544740	86514541,86528677,86529124,86531229,86532580,86537646,86540334,86544808	Gene ID= ENSG00000085719.12 TPM= 1.06 Transcript Type= protein_coding
chr8	89757747	89791063	89757747	89791063	+	ENST00000220751.4@RIPK2	ENST00000220751.4	protein_coding	89757747,89762829,89765341,89769772,89771741,89772667,89780075,89784050,89786593,89789321,89790079	89758233,89762982,89765496,89769929,89771790,89772828,89780160,89784139,89786686,89789482,89791063	Gene ID= ENSG00000104312.7 TPM= 5.31 Transcript Type= protein_coding
chr8	89933336	90003228	89933336	90003228	-	ENST00000396252.6@NBN	ENST00000396252.6	protein_coding	90003112,89984917,89984525,89982722,89981953,89981375,89980734,89978220,89971173,89970364,89964410,89958725,89955283,89953244,89947824,89946140,89943253,89937026,89933336	90003228,89984973,89984733,89982855,89982002,89981523,89980893,89978323,89971290,89970557,89964507,89958854,89955555,89953691,89947892,89946295,89943366,89937075,89935612	Gene ID= ENSG00000104320.13 TPM= 1.06 Transcript Type= nonsense_mediated_decay
chr8	89933336	89984716	89933336	89984716	-	ENST00000265433.7@NBN	ENST00000265433.7	protein_coding	89984525,89982722,89981375,89980734,89978220,89971173,89970364,89964410,89958725,89955283,89953244,89947824,89946140,89943253,89937026,89933336	89984716,89982855,89981523,89980893,89978323,89971290,89970557,89964507,89958854,89955555,89953691,89947892,89946295,89943366,89937075,89935612	Gene ID= ENSG00000104320.13 TPM= 1.06 Transcript Type= protein_coding
chr8	90001405	90052008	90001405	90052008	+	ENST00000220764.6@DECR1	ENST00000220764.6	protein_coding	90001405,90017124,90018909,90019086,90020909,90036841,90042728,90044849,90051677,90051838	90001561,90017326,90018966,90019172,90021056,90036940,90042800,90044995,90051739,90052008	Gene ID= ENSG00000104325.6 TPM= 323.96 Transcript Type= protein_coding
chr8	90001476	90051972	90001476	90051972	+	ENST00000517597.5@DECR1	ENST00000517597.5	protein_coding	90001476,90018909,90019086,90020909,90036841,90042728,90044849,90051677,90051838	90001561,90018966,90019172,90021056,90036940,90042800,90044995,90051739,90051972	Gene ID= ENSG00000104325.6 TPM= 11.68 Transcript Type= nonsense_mediated_decay
chr8	90001477	90051999	90001477	90051999	+	ENST00000522161.5@DECR1	ENST00000522161.5	protein_coding	90001477,90005448,90006036,90017124,90018909,90019086,90020909,90036841,90042728,90044849,90051677,90051838	90001561,90005845,90006277,90017326,90018966,90019172,90021056,90036940,90042800,90044995,90051739,90051999	Gene ID= ENSG00000104325.6 TPM= 4.25 Transcript Type= protein_coding
chr8	90001477	90004364	90001477	90004364	+	transcript2564.chr8.nnic@NA	transcript2564.chr8.nnic	NA	90001477	90004364	Gene ID= novel_gene_chr8_2565 TPM= 5.31 Transcript Type= NA
chr8	90013401	90016943	90013401	90016943	-	transcript2566.chr8.nnic@NA	transcript2566.chr8.nnic	NA	90013401	90016943	Gene ID= novel_gene_chr8_2567 TPM= 7.44 Transcript Type= NA
chr8	90621995	90646083	90621995	90646083	-	ENST00000458549.6@TMEM64	ENST00000458549.6	protein_coding	90645111,90631552,90621995	90646083,90631707,90625862	Gene ID= ENSG00000180694.13 TPM= 5.31 Transcript Type= protein_coding
chr8	90940522	90957847	90940522	90957847	+	ENST00000521366.1@NECAB1	ENST00000521366.1	protein_coding	90940522,90949807,90951113,90955487	90940898,90949884,90951204,90957847	Gene ID= ENSG00000123119.11 TPM= 2.12 Transcript Type= protein_coding
chr8	90940535	90957865	90940535	90957865	+	transcript2590.chr8.nnic@NECAB1	transcript2590.chr8.nnic	protein_coding	90940535,90949807,90955487	90940898,90949884,90957865	Gene ID= ENSG00000123119.11 TPM= 4.25 Transcript Type= NA
chr8	90958637	90985257	90958637	90985257	-	ENST00000517562.2@C8orf88	ENST00000517562.2	protein_coding	90985114,90980363,90978579,90971066,90960742,90958637	90985257,90980461,90978652,90971141,90960848,90959030	Gene ID= ENSG00000253250.2 TPM= 23.37 Transcript Type= protein_coding
chr8	90993796	91041064	90993796	91041064	-	ENST00000285419.7@TMEM55A	ENST00000285419.7	protein_coding	91040644,91021256,91020157,91018390,91008743,90996654,90993796	91041064,91021404,91020263,91018513,91008795,90996744,90995820	Gene ID= ENSG00000155099.7 TPM= 4.25 Transcript Type= protein_coding
chr8	91067911	91070189	91067911	91070189	-	ENST00000524003.1@OTUD6B-AS1	ENST00000524003.1	antisense_RNA	91069931,91067911	91070189,91069822	Gene ID= ENSG00000253738.1 TPM= 22.31 Transcript Type= antisense_RNA
chr8	91070196	91087091	91070196	91087091	+	ENST00000615618.1@OTUD6B	ENST00000615618.1	protein_coding	91070196,91071138,91073831,91076592,91078356,91080669,91084008,91084784	91070466,91071289,91073911,91076731,91078668,91080730,91084114,91087091	Gene ID= ENSG00000155100.10 TPM= 1.06 Transcript Type= protein_coding
chr8	91954975	92103226	91954975	92103226	-	ENST00000523629.5@RUNX1T1	ENST00000523629.5	protein_coding	92102857,92075965,92017226,92014579,92011002,92005116,91991639,91986887,91986124,91975905,91970658,91954975	92103226,92076137,92017363,92014820,92011091,92005297,91991889,91986972,91986325,91975973,91970848,91960517	Gene ID= ENSG00000079102.16 TPM= 5.13 Transcript Type= protein_coding
chr8	91954967	92103226	91954967	92103226	-	ENST00000615601.4@RUNX1T1	ENST00000615601.4	protein_coding	92102857,92017226,92014579,92011002,92005116,91991639,91986887,91986124,91975905,91970658,91954967	92103226,92017363,92014820,92011091,92005297,91991889,91986972,91986325,91975973,91970848,91960517	Gene ID= ENSG00000079102.16 TPM= 5.13 Transcript Type= protein_coding
chr8	91958924	92062963	91958924	92062963	-	ENST00000396218.5@RUNX1T1	ENST00000396218.5	protein_coding	92062546,92017226,92014579,92011002,92005116,91991639,91986887,91986124,91975905,91970658,91958924	92062963,92017363,92014820,92011091,92005297,91991889,91986972,91986325,91975973,91970848,91960517	Gene ID= ENSG00000079102.16 TPM= 3.54 Transcript Type= protein_coding
chr8	92099169	92102435	92099169	92102435	+	transcript2627.chr8.nnic@NA	transcript2627.chr8.nnic	NA	92099169	92102435	Gene ID= novel_gene_chr8_2628 TPM= 14.87 Transcript Type= NA
chr8	92883530	92966145	92883530	92966145	-	ENST00000521988.5@TRIQK	ENST00000521988.5	protein_coding	92966007,92954406,92916929,92891989,92883530	92966145,92954564,92917010,92892074,92886735	Gene ID= ENSG00000205133.11 TPM= 4.25 Transcript Type= protein_coding
chr8	92885320	93017673	92885320	93017673	-	ENST00000520686.5@TRIQK	ENST00000520686.5	protein_coding	93017609,92954406,92916929,92891989,92885320	93017673,92954564,92917010,92892074,92886735	Gene ID= ENSG00000205133.11 TPM= 3.19 Transcript Type= protein_coding
chr8	92883532	92966144	92883532	92966144	-	ENST00000537541.1@TRIQK	ENST00000537541.1	protein_coding	92966007,92916929,92891989,92883532	92966144,92917010,92892074,92886735	Gene ID= ENSG00000205133.11 TPM= 2.12 Transcript Type= protein_coding
chr8	92883635	92966144	92883635	92966144	-	ENST00000518748.5@TRIQK	ENST00000518748.5	protein_coding	92966007,92954406,92916929,92891989,92883635	92966144,92954564,92917007,92892074,92886735	Gene ID= ENSG00000205133.11 TPM= 3.19 Transcript Type= protein_coding
chr8	92909496	92910340	92909496	92910340	+	transcript2641.chr8.nnic@NA	transcript2641.chr8.nnic	NA	92909496	92910340	Gene ID= novel_gene_chr8_2642 TPM= 2.12 Transcript Type= NA
chr8	93700829	93729250	93700829	93729250	+	transcript2652.chr8.nic@FAM92A	transcript2652.chr8.nic	protein_coding	93700829,93701224,93703620,93704909,93708011,93709771,93718675,93726394,93728205	93701057,93701458,93703688,93705010,93708016,93709875,93718788,93726513,93729250	Gene ID= ENSG00000188343.12 TPM= 3.19 Transcript Type= NA
chr8	93700593	93728389	93700593	93728389	+	ENST00000620645.1@FAM92A	ENST00000620645.1	protein_coding	93700593,93701224,93703620,93704909,93709760,93709771,93718675,93726394,93728205	93700673,93701458,93703688,93705005,93709767,93709875,93718788,93726513,93728389	Gene ID= ENSG00000188343.12 TPM= 3.19 Transcript Type= protein_coding
chr8	93729356	93741017	93729356	93741017	-	ENST00000399300.6@RBM12B	ENST00000399300.6	protein_coding	93740881,93737307,93729356	93741017,93737355,93736438	Gene ID= ENSG00000183808.11 TPM= 4.25 Transcript Type= protein_coding
chr8	93735265	93737827	93735265	93737827	+	transcript2665.chr8.nnic@NA	transcript2665.chr8.nnic	NA	93735265	93737827	Gene ID= novel_gene_chr8_2666 TPM= 31.86 Transcript Type= NA
chr8	93735265	93737829	93735265	93737829	+	transcript2660.chr8.nnic@NA	transcript2660.chr8.nnic	NA	93735265,93737307,93737447	93736440,93737357,93737829	Gene ID= novel_gene_chr8_2661 TPM= 4.25 Transcript Type= NA
chr8	93794775	93819234	93794775	93819234	+	transcript2668.chr8.nic@TMEM67	transcript2668.chr8.nic	protein_coding	93794775,93795409,93795901,93797134,93797331,93799618,93803604,93804762,93808840,93809057,93809785,93815305,93816372,93818990	93795221,93795507,93795987,93797233,93797470,93799758,93803684,93804878,93808956,93809161,93809887,93815447,93816515,93819234	Gene ID= ENSG00000164953.15 TPM= 2.12 Transcript Type= NA
chr8	93794775	93816919	93794775	93816919	+	transcript2671.chr8.nnic@TMEM67	transcript2671.chr8.nnic	protein_coding	93794775,93795409,93795901,93797134,93797331,93799618,93803604,93804762,93808840,93809057,93809785,93815305,93816372	93794868,93795507,93795987,93797233,93797470,93799758,93803684,93804878,93808956,93809161,93809887,93815447,93816919	Gene ID= ENSG00000164953.15 TPM= 6.37 Transcript Type= NA
chr8	93795744	93816919	93795744	93816919	+	transcript2682.chr8.nic@TMEM67	transcript2682.chr8.nic	protein_coding	93795744,93797134,93797331,93799618,93803604,93804762,93808840,93809057,93809785,93815305,93816372	93795987,93797233,93797470,93799758,93803684,93804878,93808956,93809161,93809887,93815447,93816919	Gene ID= ENSG00000164953.15 TPM= 3.19 Transcript Type= NA
chr8	93884841	93898583	93884841	93898583	-	transcript2684.chr8.nnic@NA	transcript2684.chr8.nnic	NA	93898282,93884841	93898583,93885036	Gene ID= novel_gene_chr8_2685 TPM= 4.25 Transcript Type= NA
chr8	93916891	93926066	93916891	93926066	+	transcript2687.chr8.nnic@PDP1	transcript2687.chr8.nnic	protein_coding	93916891,93917841,93922016	93917079,93917945,93926066	Gene ID= ENSG00000164951.15 TPM= 19.65 Transcript Type= NA
chr8	93916855	93926062	93916855	93926062	+	ENST00000297598.4@PDP1	ENST00000297598.4	protein_coding	93916855,93922016	93917079,93926062	Gene ID= ENSG00000164951.15 TPM= 119.49 Transcript Type= protein_coding
chr8	93916934	93924388	93916934	93924388	+	ENST00000520728.5@PDP1	ENST00000520728.5	protein_coding	93916934,93917911,93922016	93917079,93917945,93924388	Gene ID= ENSG00000164951.15 TPM= 10.62 Transcript Type= protein_coding
chr8	94249253	94262350	94249253	94262350	-	ENST00000396194.6@GEM	ENST00000396194.6	protein_coding	94262205,94260173,94253036,94252019,94249253	94262350,94260512,94253112,94252223,94250587	Gene ID= ENSG00000164949.7 TPM= 9.56 Transcript Type= protein_coding
chr8	94249258	94262345	94249258	94262345	-	ENST00000297596.2@GEM	ENST00000297596.2	protein_coding	94262090,94260173,94253036,94252019,94249258	94262345,94260512,94253112,94252223,94250587	Gene ID= ENSG00000164949.7 TPM= 25.49 Transcript Type= protein_coding
chr8	94487693	94553523	94487693	94553523	-	ENST00000297591.9@VIRMA	ENST00000297591.9	protein_coding	94553385,94543827,94538260,94537103,94534839,94530963,94529070,94526223,94518985,94517788,94514869,94511996,94511185,94510417,94509688,94506500,94499374,94496328,94495731,94494860,94492652,94491578,94489939,94487693	94553523,94543942,94538346,94537151,94535007,94531085,94529342,94527363,94519476,94517942,94514951,94512089,94511729,94510652,94509940,94506717,94499506,94496480,94495891,94494956,94492818,94491909,94490082,94488860	Gene ID= ENSG00000164944.11 TPM= 8.5 Transcript Type= protein_coding
chr8	94719848	94790958	94719848	94790958	+	transcript2719.chr8.nic@DPY19L4	transcript2719.chr8.nic	protein_coding	94719848,94726331,94739413,94739645,94756036,94761700,94765183,94765711,94766612,94768395,94770452,94777666,94780359,94781084,94783670,94787894,94789746	94720014,94726441,94739534,94739790,94756159,94761834,94765314,94765809,94766685,94768553,94770571,94777786,94780415,94781166,94783802,94788052,94790958	Gene ID= ENSG00000156162.16 TPM= 2.12 Transcript Type= NA
chr8	94719916	94745084	94719916	94745084	+	transcript2726.chr8.nic@DPY19L4	transcript2726.chr8.nic	protein_coding	94719916,94726331,94734630,94738369,94739413,94739645,94744485	94720014,94726441,94734754,94738459,94739534,94739790,94745084	Gene ID= ENSG00000156162.16 TPM= 2.12 Transcript Type= NA
chr8	94823254	94880314	94823254	94880314	+	transcript2732.chr8.nic@INTS8	transcript2732.chr8.nic	protein_coding	94823254,94827263,94827722,94828975,94831992,94836524,94838463,94841491,94842347,94849462,94849916,94851553,94853805,94856777,94859511,94865506,94866158,94867140,94867276,94871884,94873374,94874552,94876074,94876221,94876446,94880118	94823561,94827403,94827793,94829026,94832174,94836631,94838618,94841591,94842488,94849532,94850091,94851686,94853915,94856978,94859632,94865690,94866191,94867196,94867337,94872002,94873477,94874602,94876147,94876285,94876489,94880314	Gene ID= ENSG00000164941.13 TPM= 6.37 Transcript Type= NA
chr8	94925972	94949366	94925972	94949366	-	ENST00000448464.6@TP53INP1	ENST00000448464.6	protein_coding	94949154,94940830,94939860,94932070,94925972	94949366,94941091,94940220,94932107,94930728	Gene ID= ENSG00000164938.13 TPM= 12.75 Transcript Type= protein_coding
chr8	94925972	94949411	94925972	94949411	-	ENST00000342697.4@TP53INP1	ENST00000342697.4	protein_coding	94949154,94940830,94939860,94925972	94949411,94941091,94940220,94930728	Gene ID= ENSG00000164938.13 TPM= 10.62 Transcript Type= protein_coding
chr8	95024975	95057952	95024975	95057952	+	transcript2752.chr8.nic@NDUFAF6	transcript2752.chr8.nic	protein_coding	95024975,95031995,95035454,95036371,95041570,95045545,95046994,95048457,95052174,95057809	95025205,95032094,95035576,95036494,95041626,95045647,95047127,95048558,95052230,95057952	Gene ID= ENSG00000156170.12 TPM= 2.12 Transcript Type= NA
chr8	95025038	95057952	95025038	95057952	+	transcript2754.chr8.nic@NDUFAF6	transcript2754.chr8.nic	protein_coding	95025038,95031995,95034008,95035454,95041570,95045545,95046994,95048457,95052174,95057809	95025205,95032098,95034122,95035576,95041626,95045647,95047127,95048558,95052230,95057952	Gene ID= ENSG00000156170.12 TPM= 2.12 Transcript Type= NA
chr8	95133804	95156684	95133804	95156684	+	ENST00000315367.3@PLEKHF2	ENST00000315367.3	protein_coding	95133804,95154031	95134030,95156684	Gene ID= ENSG00000175895.3 TPM= 33.99 Transcript Type= protein_coding
chr8	95244919	95269201	95244919	95269201	-	ENST00000286688.5@C8orf37	ENST00000286688.5	protein_coding	95269035,95263687,95260468,95259840,95252188,95244919	95269201,95263774,95260532,95259905,95252283,95247770	Gene ID= ENSG00000156172.5 TPM= 1.06 Transcript Type= protein_coding
chr8	96225920	96235634	96225920	96235634	-	ENST00000287022.9@UQCRB	ENST00000287022.9	protein_coding	96235512,96233156,96231774,96225920	96235634,96233227,96231940,96231132	Gene ID= ENSG00000156467.9 TPM= 369.1 Transcript Type= protein_coding
chr8	96230942	96235539	96230942	96235539	-	ENST00000518406.5@UQCRB	ENST00000518406.5	protein_coding	96235512,96233156,96231774,96231379,96230942	96235539,96233227,96231940,96231515,96231132	Gene ID= ENSG00000156467.9 TPM= 13.28 Transcript Type= protein_coding
chr8	96239429	96261615	96239429	96261615	-	transcript2777.chr8.nic@MTERF3	transcript2777.chr8.nic	protein_coding	96261501,96258357,96256962,96250906,96246307,96245860,96239429	96261615,96258700,96257114,96251095,96246454,96245931,96239685	Gene ID= ENSG00000156469.8 TPM= 3.72 Transcript Type= NA
chr8	96239435	96261589	96239435	96261589	-	ENST00000287025.3@MTERF3	ENST00000287025.3	protein_coding	96261501,96258357,96256962,96250906,96246307,96245860,96243919,96239435	96261589,96258700,96257114,96251095,96246454,96245931,96244080,96239685	Gene ID= ENSG00000156469.8 TPM= 39.83 Transcript Type= protein_coding
chr8	96493351	96611780	96493351	96611780	+	ENST00000302190.8@SDC2	ENST00000302190.8	protein_coding	96493351,96593480,96602395,96608335,96609385	96494331,96593591,96602528,96608470,96611780	Gene ID= ENSG00000169439.11 TPM= 16.99 Transcript Type= protein_coding
chr8	96518363	96527327	96518363	96527327	-	transcript2793.chr8.nnic@NA	transcript2793.chr8.nnic	NA	96518363	96527327	Gene ID= novel_gene_chr8_2794 TPM= 2.12 Transcript Type= NA
chr8	96645227	97143501	96645227	97143501	+	ENST00000220763.9@CPQ	ENST00000220763.9	protein_coding	96645227,96784864,96834973,96879798,96965935,97029403,97066009,97143020	96645402,96785330,96835180,96880005,96966046,97029494,97066210,97143501	Gene ID= ENSG00000104324.15 TPM= 36.11 Transcript Type= protein_coding
chr8	96645294	96969080	96645294	96969080	+	transcript2798.chr8.nic@CPQ	transcript2798.chr8.nic	protein_coding	96645294,96784864,96834973,96879798,96965935	96645402,96785330,96835180,96880005,96969080	Gene ID= ENSG00000104324.15 TPM= 2.12 Transcript Type= NA
chr8	97273491	97277929	97273491	97277929	-	transcript2804.chr8.nnic@TSPYL5	transcript2804.chr8.nnic	protein_coding	97275640,97273491	97277929,97274363	Gene ID= ENSG00000180543.4 TPM= 3.19 Transcript Type= NA
chr8	97273474	97277964	97273474	97277964	-	ENST00000322128.4@TSPYL5	ENST00000322128.4	protein_coding	97273474	97277964	Gene ID= ENSG00000180543.4 TPM= 32.93 Transcript Type= protein_coding
chr8	97644162	97726310	97644162	97726310	+	transcript2807.chr8.nnic@MTDH	transcript2807.chr8.nnic	protein_coding	97644162,97661072,97686668,97687429,97689038,97690952,97696204,97699754,97706626,97713662,97719049,97722879,97724600	97644887,97661173,97686752,97687605,97689103,97691188,97696293,97699852,97706750,97713769,97719189,97723035,97726310	Gene ID= ENSG00000147649.9 TPM= 7.44 Transcript Type= NA
chr8	97644142	97713735	97644142	97713735	+	transcript2815.chr8.nic@MTDH	transcript2815.chr8.nic	protein_coding	97644142,97661072,97686668,97687429,97689038,97690952,97699754,97706626,97713662	97644887,97661173,97686752,97687605,97689103,97691188,97699852,97706750,97713735	Gene ID= ENSG00000147649.9 TPM= 37.18 Transcript Type= NA
chr8	97644161	97713735	97644161	97713735	+	transcript2817.chr8.nic@MTDH	transcript2817.chr8.nic	protein_coding	97644161,97661072,97686668,97687429,97689038,97690952,97706626,97713662	97644887,97661173,97686752,97687605,97689103,97691188,97706750,97713735	Gene ID= ENSG00000147649.9 TPM= 29.74 Transcript Type= NA
chr8	97644170	97713735	97644170	97713735	+	transcript2818.chr8.nic@MTDH	transcript2818.chr8.nic	protein_coding	97644170,97661072,97686668,97687429,97690952,97699754,97706626,97713662	97644887,97661173,97686752,97687605,97691188,97699852,97706750,97713735	Gene ID= ENSG00000147649.9 TPM= 4.25 Transcript Type= NA
chr8	97644168	97713735	97644168	97713735	+	transcript2820.chr8.nic@MTDH	transcript2820.chr8.nic	protein_coding	97644168,97661072,97686668,97687429,97690952,97706626,97713662	97644887,97661173,97686752,97687605,97691188,97706750,97713735	Gene ID= ENSG00000147649.9 TPM= 5.31 Transcript Type= NA
chr8	97648496	97651868	97648496	97651868	-	transcript2827.chr8.nnic@NA	transcript2827.chr8.nnic	NA	97648496	97651868	Gene ID= novel_gene_chr8_2828 TPM= 3.19 Transcript Type= NA
chr8	97778314	97778593	97778314	97778593	-	transcript2840.chr8.nnic@NA	transcript2840.chr8.nnic	NA	97778314	97778593	Gene ID= novel_gene_chr8_2841 TPM= 2.12 Transcript Type= NA
chr8	97783074	97784235	97783074	97784235	-	transcript2838.chr8.nnic@NA	transcript2838.chr8.nnic	NA	97783074	97784235	Gene ID= novel_gene_chr8_2839 TPM= 5.31 Transcript Type= NA
chr8	98021002	98036158	98021002	98036158	+	transcript2847.chr8.nnic@MATN2	transcript2847.chr8.nnic	protein_coding	98021002,98021205,98027416,98030462,98032246,98033042,98033561,98035657	98021095,98021327,98027829,98030614,98032317,98033176,98033659,98036158	Gene ID= ENSG00000132561.13 TPM= 2.12 Transcript Type= NA
chr8	97869113	98004286	97869113	98004286	+	ENST00000523490.1@MATN2	ENST00000523490.1	protein_coding	97869113,97888075,97930953,97941777,97961408,97978886,97994480,98003661	97869287,97888242,97931522,97941899,97961530,97979008,97994602,98004286	Gene ID= ENSG00000132561.13 TPM= 3.19 Transcript Type= retained_intron
chr8	98041721	98045590	98041721	98045590	-	ENST00000287038.7@RPL30	ENST00000287038.7	protein_coding	98045508,98045347,98044943,98042645,98041721	98045590,98045399,98045088,98042775,98041850	Gene ID= ENSG00000156482.10 TPM= 172.78 Transcript Type= protein_coding
chr8	98041721	98045514	98041721	98045514	-	ENST00000521291.5@RPL30	ENST00000521291.5	protein_coding	98045347,98044943,98042645,98041721	98045514,98045088,98042775,98041850	Gene ID= ENSG00000156482.10 TPM= 24.08 Transcript Type= protein_coding
chr8	98041721	98045544	98041721	98045544	-	ENST00000396070.6@RPL30	ENST00000396070.6	protein_coding	98045508,98045347,98044943,98042645,98041721	98045544,98045399,98045088,98042718,98041850	Gene ID= ENSG00000156482.10 TPM= 9.56 Transcript Type= protein_coding
chr8	98064311	98093610	98064311	98093610	+	ENST00000318528.7@ERICH5	ENST00000318528.7	protein_coding	98064311,98089076,98093221	98064727,98090029,98093610	Gene ID= ENSG00000177459.10 TPM= 3.19 Transcript Type= protein_coding
chr8	98102344	98117241	98102344	98117241	-	ENST00000254878.7@RIDA	ENST00000254878.7	protein_coding	98117032,98108646,98106272,98105938,98104489,98102344	98117241,98108751,98106326,98106006,98104544,98102904	Gene ID= ENSG00000132541.10 TPM= 10.62 Transcript Type= protein_coding
chr8	98117297	98136571	98117297	98136571	+	transcript2866.chr8.nic@POP1	transcript2866.chr8.nic	protein_coding	98117297,98123336,98127595,98128365,98129978,98133949,98134472,98136482	98117390,98123479,98127762,98128540,98130226,98134036,98134659,98136571	Gene ID= ENSG00000104356.10 TPM= 2.12 Transcript Type= NA
chr8	98117312	98159834	98117312	98159834	+	ENST00000401707.6@POP1	ENST00000401707.6	protein_coding	98117312,98123336,98127595,98128365,98129978,98133949,98134472,98136482,98136861,98140078,98140769,98146568,98148815,98150485,98156050,98157617	98117390,98123479,98127762,98128540,98130226,98134036,98134659,98136738,98136954,98140189,98140888,98146683,98149006,98150639,98156412,98159834	Gene ID= ENSG00000104356.10 TPM= 2.12 Transcript Type= protein_coding
chr8	98189833	98294336	98189833	98294336	-	ENST00000430223.6@NIPAL2	ENST00000430223.6	protein_coding	98294003,98254019,98252463,98236155,98222479,98212405,98205111,98203108,98195942,98194728,98189833	98294336,98254087,98252634,98236214,98222600,98212501,98205246,98203196,98196005,98194822,98193090	Gene ID= ENSG00000104361.9 TPM= 10.62 Transcript Type= protein_coding
chr8	98454633	98825681	98454633	98825681	-	ENST00000419617.6@STK3	ENST00000419617.6	protein_coding	98825515,98774739,98767243,98749276,98707147,98706467,98596032,98579664,98547969,98526742,98454633	98825681,98774819,98767371,98749390,98707311,98706634,98596169,98579789,98548161,98526917,98456000	Gene ID= ENSG00000104375.15 TPM= 13.81 Transcript Type= protein_coding
chr8	98944403	98952104	98944403	98952104	+	ENST00000457907.3@OSR2	ENST00000457907.3	protein_coding	98944403,98948173,98948839,98950656,98951519	98944823,98948421,98949608,98950755,98952104	Gene ID= ENSG00000164920.9 TPM= 1.06 Transcript Type= protein_coding
chr8	98944458	98952100	98944458	98952100	+	ENST00000435298.6@OSR2	ENST00000435298.6	protein_coding	98944458,98948839,98950656,98951601	98944823,98949608,98950755,98952100	Gene ID= ENSG00000164920.9 TPM= 1.06 Transcript Type= protein_coding
chr8	98996763	99013044	98996763	99013044	-	ENST00000521696.1@AC104986.2	ENST00000521696.1	lincRNA	99012869,98996763	99013044,98996966	Gene ID= ENSG00000253948.1 TPM= 9.56 Transcript Type= lincRNA
chr8	99878151	99893623	99878151	99893623	-	ENST00000522940.5@COX6C	ENST00000522940.5	protein_coding	99893319,99891908,99887490,99878151	99893623,99892052,99887618,99878265	Gene ID= ENSG00000164919.10 TPM= 2.47 Transcript Type= protein_coding
chr8	99877866	99894062	99877866	99894062	-	ENST00000520468.6@COX6C	ENST00000520468.6	protein_coding	99893639,99891908,99887490,99877866	99894062,99892052,99887618,99878265	Gene ID= ENSG00000164919.10 TPM= 485.76 Transcript Type= protein_coding
chr8	99878149	99893686	99878149	99893686	-	transcript2898.chr8.nnic@COX6C	transcript2898.chr8.nnic	protein_coding	99893639,99887490,99878149	99893686,99887618,99878265	Gene ID= ENSG00000164919.10 TPM= 11.68 Transcript Type= NA
chr8	99878149	99893622	99878149	99893622	-	ENST00000520271.5@COX6C	ENST00000520271.5	protein_coding	99893443,99891908,99887490,99878149	99893622,99892052,99887618,99878265	Gene ID= ENSG00000164919.10 TPM= 17.35 Transcript Type= protein_coding
chr8	100150584	100154002	100150584	100154002	+	ENST00000353107.7@POLR2K	ENST00000353107.7	protein_coding	100150584,100151347,100151824,100153294	100150709,100151416,100151916,100154002	Gene ID= ENSG00000147669.10 TPM= 52.05 Transcript Type= protein_coding
chr8	100213152	100241903	100213152	100241903	+	transcript2912.chr8.nnic@SPAG1	transcript2912.chr8.nnic	protein_coding	100213152,100213819,100225173,100231156,100233411,100240403,100240891	100213428,100213918,100225339,100231288,100233537,100240771,100241903	Gene ID= ENSG00000104450.12 TPM= 2.12 Transcript Type= NA
chr8	100236717	100309973	100236717	100309973	-	transcript2902.chr8.nnic@RNF19A	transcript2902.chr8.nnic	protein_coding	100309867,100287501,100274953,100269869,100268785,100264671,100264034,100261542,100259854,100259107,100236717	100309973,100288267,100275161,100270013,100268947,100264785,100264195,100261755,100259997,100259246,100237434	Gene ID= ENSG00000034677.12 TPM= 3.19 Transcript Type= NA
chr8	100520776	100533993	100520776	100533993	-	transcript2922.chr8.nnic@ANKRD46	transcript2922.chr8.nnic	protein_coding	100533804,100533209,100529523,100527845,100520776	100533993,100533311,100529860,100528003,100522771	Gene ID= ENSG00000186106.11 TPM= 3.72 Transcript Type= NA
chr8	100520772	100559759	100520772	100559759	-	ENST00000335659.7@ANKRD46	ENST00000335659.7	protein_coding	100559711,100533209,100529523,100527845,100520772	100559759,100533311,100529860,100528003,100522771	Gene ID= ENSG00000186106.11 TPM= 26.02 Transcript Type= protein_coding
chr8	100520772	100559784	100520772	100559784	-	ENST00000519597.5@ANKRD46	ENST00000519597.5	protein_coding	100559711,100533209,100532356,100529523,100527845,100520772	100559784,100533311,100532460,100529860,100528003,100522771	Gene ID= ENSG00000186106.11 TPM= 2.12 Transcript Type= protein_coding
chr8	100702916	100722712	100702916	100722712	-	ENST00000318607.9@PABPC1	ENST00000318607.9	protein_coding	100721391,100718087,100717773,100715462,100713087,100712652,100712362,100709459,100709133,100706887,100706651,100705589,100704926,100704297,100702916	100722712,100718280,100717888,100715601,100713181,100712789,100712457,100709731,100709223,100706997,100706805,100705673,100705056,100704390,100703359	Gene ID= ENSG00000070756.15 TPM= 69.04 Transcript Type= protein_coding
chr8	100703285	100706779	100703285	100706779	-	ENST00000517990.5@PABPC1	ENST00000517990.5	protein_coding	100706651,100705589,100704926,100704297,100703285	100706779,100705673,100705029,100704390,100703359	Gene ID= ENSG00000070756.15 TPM= 5.31 Transcript Type= protein_coding
chr8	100916525	100952983	100916525	100952983	-	ENST00000395957.6@YWHAZ	ENST00000395957.6	protein_coding	100952850,100951929,100948596,100924916,100924135,100923955,100916525	100952983,100952125,100948900,100925039,100924298,100924050,100920752	Gene ID= ENSG00000164924.17 TPM= 3.22 Transcript Type= protein_coding
chr8	100918686	100952551	100918686	100952551	-	transcript2934.chr8.nic@YWHAZ	transcript2934.chr8.nic	protein_coding	100952473,100951929,100948596,100924916,100924135,100923955,100918686	100952551,100952125,100948900,100925039,100924298,100924050,100920752	Gene ID= ENSG00000164924.17 TPM= 75.18 Transcript Type= NA
chr8	100918683	100951449	100918683	100951449	-	ENST00000395956.7@YWHAZ	ENST00000395956.7	protein_coding	100951235,100948596,100924916,100924135,100923955,100918683	100951449,100948900,100925039,100924298,100924050,100920752	Gene ID= ENSG00000164924.17 TPM= 2.07 Transcript Type= protein_coding
chr8	100918579	100952993	100918579	100952993	-	ENST00000457309.2@YWHAZ	ENST00000457309.2	protein_coding	100952850,100948596,100924916,100924135,100923955,100918579	100952993,100948900,100925039,100924298,100924050,100920752	Gene ID= ENSG00000164924.17 TPM= 11.63 Transcript Type= protein_coding
chr8	100918686	100953341	100918686	100953341	-	ENST00000353245.7@YWHAZ	ENST00000353245.7	protein_coding	100953269,100948596,100924916,100924135,100923955,100918686	100953341,100948900,100925039,100924298,100924050,100920752	Gene ID= ENSG00000164924.17 TPM= 23.31 Transcript Type= protein_coding
chr8	101175342	101205650	101175342	101205650	-	transcript2958.chr8.nic@ZNF706	transcript2958.chr8.nic	protein_coding	101205435,101201607,101199990,101199195,101175342	101205650,101201743,101200097,101199239,101178387	Gene ID= ENSG00000120963.11 TPM= 3.19 Transcript Type= NA
chr8	101198939	101205732	101198939	101205732	-	ENST00000519882.5@ZNF706	ENST00000519882.5	protein_coding	101205435,101202333,101201607,101199990,101198939	101205732,101202447,101201743,101200097,101199239	Gene ID= ENSG00000120963.11 TPM= 5.31 Transcript Type= protein_coding
chr8	101197052	101205616	101197052	101205616	-	ENST00000311212.8@ZNF706	ENST00000311212.8	protein_coding	101205435,101201607,101199990,101197052	101205616,101201743,101200097,101199239	Gene ID= ENSG00000120963.11 TPM= 6.37 Transcript Type= protein_coding
chr8	101686727	101790961	101686727	101790961	-	ENST00000220931.10@NCALD	ENST00000220931.10	protein_coding	101790862,101719252,101692791,101686727	101790961,101719648,101692896,101689406	Gene ID= ENSG00000104490.17 TPM= 3.19 Transcript Type= protein_coding
chr8	102204502	102239118	102204502	102239118	-	ENST00000251810.7@RRM2B	ENST00000251810.7	protein_coding	102238827,102232149,102225918,102224885,102224046,102218814,102214054,102212776,102204502	102239118,102232304,102226034,102225018,102224140,102218947,102214158,102212889,102208285	Gene ID= ENSG00000048392.11 TPM= 10.62 Transcript Type= protein_coding
chr8	102254198	102412759	102254198	102412759	-	ENST00000521922.5@UBR5	ENST00000521922.5	protein_coding	102412173,102361582,102361125,102360589,102360071,102346903,102346236,102345396,102342473,102329283,102329090,102327742,102326546,102323311,102314744,102313804,102312342,102312134,102311735,102311299,102305085,102304043,102300000,102299452,102298848,102298392,102297458,102296893,102295636,102295414,102295204,102294982,102293955,102293605,102289453,102288155,102287433,102286360,102285513,102285127,102281289,102280394,102279036,102278826,102276972,102275708,102275521,102272529,102271134,102270039,102268978,102266947,102265100,102264474,102261915,102261146,102258985,102257632,102254198	102412759,102361626,102361206,102360665,102360190,102347092,102346395,102345545,102342666,102329399,102329200,102327896,102326663,102323495,102314853,102313916,102312485,102312245,102311889,102311496,102305295,102304169,102300151,102299547,102298971,102298489,102297606,102296984,102295782,102295532,102295330,102295111,102294115,102293844,102289576,102288266,102287564,102286617,102285781,102285338,102281519,102280467,102279208,102278939,102277192,102275828,102275619,102272772,102271245,102270183,102269108,102267007,102265275,102264558,102262070,102261259,102259129,102257717,102254514	Gene ID= ENSG00000104517.12 TPM= 3.72 Transcript Type= protein_coding
chr8	102253012	102412841	102253012	102412841	-	ENST00000520539.5@UBR5	ENST00000520539.5	protein_coding	102412173,102361582,102361125,102360589,102360071,102346903,102346236,102345396,102342473,102329283,102329090,102327742,102326546,102323311,102314744,102313804,102312342,102312134,102311735,102311299,102305085,102304043,102300000,102299452,102298848,102298392,102297458,102296893,102295636,102295414,102295204,102294982,102293955,102293605,102289453,102288155,102287433,102286360,102285513,102285127,102281289,102280394,102279036,102278826,102276972,102275708,102275521,102272529,102271134,102270039,102268978,102266947,102265100,102264474,102261915,102261146,102258985,102257632,102253012	102412841,102361626,102361206,102360665,102360190,102347092,102346395,102345545,102342684,102329399,102329200,102327896,102326663,102323495,102314853,102313916,102312485,102312245,102311889,102311496,102305295,102304169,102300151,102299547,102298971,102298489,102297606,102296984,102295782,102295532,102295330,102295111,102294115,102293844,102289576,102288266,102287564,102286617,102285781,102285338,102281519,102280467,102279208,102278939,102277192,102275828,102275619,102272772,102271245,102270183,102269108,102267007,102265278,102264558,102262070,102261259,102259129,102257717,102254514	Gene ID= ENSG00000104517.12 TPM= 1.59 Transcript Type= protein_coding
chr8	102648786	102654375	102648786	102654375	-	ENST00000395884.3@KLF10	ENST00000395884.3	protein_coding	102653470,102652164,102651149,102648786	102654375,102652397,102652061,102650391	Gene ID= ENSG00000155090.14 TPM= 40.89 Transcript Type= protein_coding
chr8	102648779	102655902	102648779	102655902	-	ENST00000285407.10@KLF10	ENST00000285407.10	protein_coding	102655566,102652164,102651149,102648779	102655902,102652397,102652061,102650391	Gene ID= ENSG00000155090.14 TPM= 72.76 Transcript Type= protein_coding
chr8	102826357	102864164	102826357	102864164	-	transcript2997.chr8.nic@AZIN1	transcript2997.chr8.nic	protein_coding	102863807,102858013,102849999,102843551,102839650,102838744,102836256,102834666,102834189,102833056,102829821,102829272,102826357	102864164,102858150,102850165,102843747,102839823,102838916,102836390,102834747,102834263,102833218,102829936,102829486,102828678	Gene ID= ENSG00000155096.13 TPM= 14.52 Transcript Type= NA
chr8	102826357	102864737	102826357	102864737	-	ENST00000337198.9@AZIN1	ENST00000337198.9	protein_coding	102863807,102858013,102843551,102839650,102838744,102836256,102834666,102834189,102833056,102829821,102829272,102826357	102864737,102858150,102843747,102839823,102838916,102836390,102834747,102834263,102833218,102829936,102829486,102828678	Gene ID= ENSG00000155096.13 TPM= 62.32 Transcript Type= protein_coding
chr8	102826405	102864163	102826405	102864163	-	transcript3004.chr8.nnic@AZIN1	transcript3004.chr8.nnic	protein_coding	102863807,102858013,102843551,102839650,102838744,102836256,102834666,102834189,102833056,102829821,102829427,102826405	102864163,102858150,102843747,102839823,102838916,102836390,102834747,102834263,102833218,102829936,102829486,102828585	Gene ID= ENSG00000155096.13 TPM= 11.33 Transcript Type= NA
chr8	102864337	102865319	102864337	102865319	+	ENST00000524007.1@AZIN1-AS1	ENST00000524007.1	antisense_RNA	102864337,102865103	102864623,102865319	Gene ID= ENSG00000253320.5 TPM= 3.19 Transcript Type= antisense_RNA
chr8	103021102	103069565	103021102	103069565	+	ENST00000518738.1@ATP6V1C1	ENST00000518738.1	protein_coding	103021102,103040798,103042340,103048870,103051050,103052731,103053884,103055868,103062955,103063135,103064714,103066321,103068652	103021225,103040968,103042407,103048955,103051144,103052822,103053982,103055936,103063047,103063228,103064811,103066447,103069565	Gene ID= ENSG00000155097.11 TPM= 23.37 Transcript Type= protein_coding
chr8	103071354	103072489	103071354	103072489	+	transcript3022.chr8.nnic@NA	transcript3022.chr8.nnic	NA	103071354	103072489	Gene ID= novel_gene_chr8_3023 TPM= 3.19 Transcript Type= NA
chr8	103140710	103230304	103140710	103230304	+	ENST00000309982.9@BAALC	ENST00000309982.9	protein_coding	103140710,103212919,103227989	103141057,103213085,103230304	Gene ID= ENSG00000164929.16 TPM= 1.06 Transcript Type= protein_coding
chr8	103298831	103332859	103298831	103332859	+	ENST00000358755.4@FZD6	ENST00000358755.4	protein_coding	103298831,103299956,103318590,103324481,103328268,103329655,103331341	103298995,103300284,103318786,103325498,103328416,103330065,103332859	Gene ID= ENSG00000164930.11 TPM= 8.5 Transcript Type= protein_coding
chr8	103371515	103382997	103371515	103382997	+	ENST00000330295.9@CTHRC1	ENST00000330295.9	protein_coding	103371515,103375738,103378027,103382458	103371806,103375959,103378243,103382997	Gene ID= ENSG00000164932.12 TPM= 6.37 Transcript Type= protein_coding
chr8	103398635	103415104	103398635	103415104	-	ENST00000297578.8@SLC25A32	ENST00000297578.8	protein_coding	103414784,103407634,103404776,103403164,103401941,103401516,103398635	103415104,103407784,103404861,103403324,103402054,103401661,103400546	Gene ID= ENSG00000164933.11 TPM= 8.5 Transcript Type= protein_coding
chr8	103414714	103443453	103414714	103443453	+	ENST00000297579.9@DCAF13	ENST00000297579.9	protein_coding	103414714,103420264,103420975,103426056,103427097,103430612,103432659,103435626,103440136,103441455,103442795	103415516,103420463,103421082,103426145,103427252,103430689,103432741,103435790,103440271,103441618,103443453	Gene ID= ENSG00000164934.13 TPM= 14.87 Transcript Type= protein_coding
chr8	104478539	104480783	104478539	104480783	-	ENST00000625136.1@AP002847.1	ENST00000625136.1	TEC	104478539	104480783	Gene ID= ENSG00000279138.1 TPM= 1.06 Transcript Type= TEC
chr8	104489250	104589006	104489250	104589006	-	ENST00000276654.9@LRP12	ENST00000276654.9	protein_coding	104588819,104531907,104508939,104499317,104496972,104495077,104489250	104589006,104531963,104509074,104499519,104498076,104495209,104491539	Gene ID= ENSG00000147650.11 TPM= 13.81 Transcript Type= protein_coding
chr8	105318436	105635471	105318436	105635471	+	transcript3061.chr8.nic@ZFPM2	transcript3061.chr8.nic	protein_coding	105318436,105419144,105444280,105561363,105634246	105318981,105419302,105444381,105561481,105635471	Gene ID= ENSG00000169946.13 TPM= 2.12 Transcript Type= NA
chr8	105318436	105447203	105318436	105447203	+	transcript3064.chr8.nic@ZFPM2	transcript3064.chr8.nic	protein_coding	105318436,105419144,105444280	105318981,105419302,105447203	Gene ID= ENSG00000169946.13 TPM= 4.25 Transcript Type= NA
chr8	105425106	105426778	105425106	105426778	+	transcript3067.chr8.nnic@NA	transcript3067.chr8.nnic	NA	105425106	105426778	Gene ID= novel_gene_chr8_3068 TPM= 2.12 Transcript Type= NA
chr8	105456170	105459241	105456170	105459241	-	transcript3069.chr8.nnic@NA	transcript3069.chr8.nnic	NA	105456170	105459241	Gene ID= novel_gene_chr8_3070 TPM= 5.31 Transcript Type= NA
chr8	105468966	105470134	105468966	105470134	-	transcript3071.chr8.nnic@NA	transcript3071.chr8.nnic	NA	105468966	105470134	Gene ID= novel_gene_chr8_3072 TPM= 3.19 Transcript Type= NA
chr8	105631597	105635469	105631597	105635469	+	transcript3065.chr8.nnic@NA	transcript3065.chr8.nnic	NA	105631597	105635469	Gene ID= novel_gene_chr8_3066 TPM= 2.12 Transcript Type= NA
chr8	106270144	106272899	106270144	106272899	+	ENST00000521369.2@AC027031.2	ENST00000521369.2	lincRNA	106270144,106271806	106270367,106272899	Gene ID= ENSG00000254615.2 TPM= 1.06 Transcript Type= lincRNA
chr8	106657850	106752682	106657850	106752682	+	transcript3076.chr8.nic@OXR1	transcript3076.chr8.nic	protein_coding	106657850,106679210,106683199,106684246,106692728,106702906,106706382,106710622,106713823,106737520,106739458,106740343,106742222,106745789,106750806	106658185,106679292,106683306,106684359,106692877,106703090,106707145,106710790,106713985,106737600,106739583,106740495,106742317,106745862,106752682	Gene ID= ENSG00000164830.18 TPM= 9.21 Transcript Type= NA
chr8	106657854	106752694	106657854	106752694	+	ENST00000312046.10@OXR1	ENST00000312046.10	protein_coding	106657854,106679210,106683199,106684246,106692728,106702906,106706382,106710622,106713823,106739458,106740343,106742222,106745789,106750806	106658185,106679292,106683306,106684359,106692877,106703090,106707145,106710790,106713985,106739583,106740495,106742317,106745862,106752694	Gene ID= ENSG00000164830.18 TPM= 1.77 Transcript Type= protein_coding
chr8	106726012	106752679	106726012	106752679	+	ENST00000449762.6@OXR1	ENST00000449762.6	protein_coding	106726012,106739458,106740343,106742222,106745789,106750806	106726309,106739583,106740495,106742317,106745862,106752679	Gene ID= ENSG00000164830.18 TPM= 5.31 Transcript Type= protein_coding
chr8	106726107	106752016	106726107	106752016	+	ENST00000297447.10@OXR1	ENST00000297447.10	protein_coding	106726107,106737520,106739458,106740343,106742222,106745789,106750806	106726309,106737600,106739583,106740495,106742317,106745862,106752016	Gene ID= ENSG00000164830.18 TPM= 5.31 Transcript Type= protein_coding
chr8	106640651	106657570	106640651	106657570	-	transcript3086.chr8.nnic@AC090579.1	transcript3086.chr8.nnic	antisense_RNA	106657502,106656111,106650167,106646717,106640651	106657570,106656365,106650270,106646776,106641375	Gene ID= ENSG00000253582.1 TPM= 2.12 Transcript Type= NA
chr8	106759483	106770245	106759483	106770245	-	ENST00000311955.3@ABRA	ENST00000311955.3	protein_coding	106769523,106759483	106770245,106761514	Gene ID= ENSG00000174429.3 TPM= 40.36 Transcript Type= protein_coding
chr8	108201743	108248765	108201743	108248765	-	ENST00000220849.9@EIF3E	ENST00000220849.9	protein_coding	108248613,108241799,108239958,108236161,108234998,108229070,108228267,108217334,108216412,108214607,108203401,108202983,108201743	108248765,108241913,108240075,108236203,108235102,108229195,108228391,108217460,108216513,108214716,108203503,108203117,108201923	Gene ID= ENSG00000104408.9 TPM= 81.79 Transcript Type= protein_coding
chr8	108233394	108248698	108233394	108248698	-	ENST00000521440.5@EIF3E	ENST00000521440.5	protein_coding	108248613,108241799,108239958,108236161,108234998,108233394	108248698,108241913,108240075,108236203,108235102,108233672	Gene ID= ENSG00000104408.9 TPM= 2.12 Transcript Type= protein_coding
chr8	108443606	108486918	108443606	108486918	+	transcript3105.chr8.nnic@EMC2	transcript3105.chr8.nnic	protein_coding	108443606,108449823,108450428,108453062,108455873,108469826,108470062,108476782,108479006,108486512	108443698,108449936,108450492,108453147,108455930,108469911,108470121,108476892,108479110,108486918	Gene ID= ENSG00000104412.7 TPM= 4.25 Transcript Type= NA
chr8	108443624	108486912	108443624	108486912	+	ENST00000220853.7@EMC2	ENST00000220853.7	protein_coding	108443624,108449823,108450428,108453062,108455873,108469826,108470062,108475882,108476782,108479006,108486512	108443698,108449936,108450492,108453147,108455930,108469911,108470121,108475963,108476892,108479110,108486912	Gene ID= ENSG00000104412.7 TPM= 53.11 Transcript Type= protein_coding
chr8	108783537	108787615	108783537	108787615	-	ENST00000297459.3@TMEM74	ENST00000297459.3	protein_coding	108787476,108783537	108787615,108785137	Gene ID= ENSG00000164841.4 TPM= 4.25 Transcript Type= protein_coding
chr8	109240919	109334385	109240919	109334385	-	ENST00000239690.8@NUDCD1	ENST00000239690.8	protein_coding	109333893,109322309,109296384,109293344,109289751,109280968,109275352,109271005,109245322,109240919	109334385,109322463,109296569,109293524,109289933,109281172,109275496,109271130,109245481,109243301	Gene ID= ENSG00000120526.10 TPM= 2.12 Transcript Type= protein_coding
chr8	109334324	109343664	109334324	109343664	+	ENST00000521662.5@ENY2	ENST00000521662.5	protein_coding	109334324,109336128,109339320,109340489,109343405	109334402,109336204,109339390,109340563,109343664	Gene ID= ENSG00000120533.12 TPM= 5.31 Transcript Type= protein_coding
chr8	109334324	109343624	109334324	109343624	+	ENST00000522766.5@ENY2	ENST00000522766.5	protein_coding	109334324,109336128,109339320,109340444,109343405	109334402,109336204,109339390,109340563,109343624	Gene ID= ENSG00000120533.12 TPM= 1.06 Transcript Type= nonsense_mediated_decay
chr8	109539711	109565160	109539711	109565160	+	ENST00000395785.6@EBAG9	ENST00000395785.6	protein_coding	109539711,109550810,109553865,109554729,109556935,109560838,109564439	109539919,109550907,109553943,109554887,109557042,109560929,109565160	Gene ID= ENSG00000147654.14 TPM= 10.62 Transcript Type= protein_coding
chr8	109574206	109644817	109574206	109644817	-	ENST00000533065.5@SYBU	ENST00000533065.5	protein_coding	109644636,109618842,109586060,109579799,109577868,109574206	109644817,109619039,109586162,109580002,109578017,109576013	Gene ID= ENSG00000147642.16 TPM= 3.19 Transcript Type= protein_coding
chr8	115413696	115587099	115413696	115587099	-	transcript3134.chr8.nic@TRPS1	transcript3134.chr8.nic	protein_coding	115587001,115418330,115413696	115587099,115418452,115415084	Gene ID= ENSG00000104447.12 TPM= 2.12 Transcript Type= NA
chr8	116642130	116755821	116642130	116755821	-	ENST00000521861.5@EIF3H	ENST00000521861.5	protein_coding	116755666,116726016,116658813,116657215,116655856,116648806,116646471,116642130	116755821,116726172,116658980,116657314,116656005,116648926,116646603,116645103	Gene ID= ENSG00000147677.10 TPM= 4.25 Transcript Type= protein_coding
chr8	116644817	116755823	116644817	116755823	-	ENST00000611080.1@EIF3H	ENST00000611080.1	protein_coding	116755666,116737713,116726016,116658813,116657215,116655856,116648806,116646471,116644817	116755823,116737715,116726160,116658980,116657314,116656005,116648926,116646603,116645103	Gene ID= ENSG00000147677.10 TPM= 13.81 Transcript Type= protein_coding
chr8	116766503	116774690	116766503	116774690	+	ENST00000309822.6@UTP23	ENST00000309822.6	protein_coding	116766503,116770192,116771456	116766791,116770366,116774690	Gene ID= ENSG00000147679.11 TPM= 11.68 Transcript Type= protein_coding
chr8	116845935	116874207	116845935	116874207	-	transcript3140.chr8.nic@RAD21	transcript3140.chr8.nic	protein_coding	116874119,116866586,116863130,116861841,116858352,116857267,116856646,116856166,116854245,116852549,116851948,116850618,116848946,116845935	116874207,116866761,116863259,116861940,116858458,116857473,116856771,116856288,116854468,116852708,116852096,116850767,116849029,116847691	Gene ID= ENSG00000164754.14 TPM= 8.85 Transcript Type= NA
chr8	116845935	116874422	116845935	116874422	-	transcript3142.chr8.nic@RAD21	transcript3142.chr8.nic	protein_coding	116874363,116866586,116863130,116861841,116858352,116857267,116856646,116856166,116854245,116852549,116851948,116850618,116848946,116845935	116874422,116866761,116863259,116861940,116858458,116857473,116856771,116856288,116854468,116852708,116852096,116850767,116849029,116847691	Gene ID= ENSG00000164754.14 TPM= 10.97 Transcript Type= NA
chr8	116845935	116874866	116845935	116874866	-	ENST00000297338.6@RAD21	ENST00000297338.6	protein_coding	116874611,116866586,116863130,116861841,116858352,116857267,116856646,116856166,116854245,116852549,116851948,116850618,116848946,116845935	116874866,116866761,116863259,116861940,116858458,116857473,116856771,116856288,116854468,116852708,116852096,116850767,116849029,116847691	Gene ID= ENSG00000164754.14 TPM= 53.46 Transcript Type= protein_coding
chr8	117520713	117540262	117520713	117540262	+	ENST00000297347.7@MED30	ENST00000297347.7	protein_coding	117520713,117528651,117530723,117539883	117521053,117528809,117530827,117540262	Gene ID= ENSG00000164758.7 TPM= 12.75 Transcript Type= protein_coding
chr8	117794490	118111853	117794490	118111853	-	ENST00000378204.6@EXT1	ENST00000378204.6	protein_coding	118110085,117837108,117835444,117830230,117822465,117819676,117818435,117812872,117807217,117804722,117794490	118111853,117837201,117835551,117830349,117822597,117819794,117818530,117812961,117807377,117804893,117799897	Gene ID= ENSG00000182197.10 TPM= 3.19 Transcript Type= protein_coding
chr8	118071328	118074585	118071328	118074585	+	transcript3165.chr8.nnic@NA	transcript3165.chr8.nnic	NA	118071328	118074585	Gene ID= novel_gene_chr8_3166 TPM= 5.31 Transcript Type= NA
chr8	118074633	118078570	118074633	118078570	+	transcript3167.chr8.nnic@NA	transcript3167.chr8.nnic	NA	118074633	118078570	Gene ID= novel_gene_chr8_3168 TPM= 4.25 Transcript Type= NA
chr8	118099174	118102355	118099174	118102355	+	transcript3169.chr8.nnic@NA	transcript3169.chr8.nnic	NA	118099174	118102355	Gene ID= novel_gene_chr8_3170 TPM= 3.19 Transcript Type= NA
chr8	118189459	118621945	118189459	118621945	-	ENST00000409003.4@SAMD12	ENST00000409003.4	protein_coding	118621804,118580715,118439832,118379560,118189459	118621945,118580893,118439961,118379700,118197732	Gene ID= ENSG00000177570.13 TPM= 8.5 Transcript Type= protein_coding
chr8	118313923	118316383	118313923	118316383	+	transcript3177.chr8.nnic@NA	transcript3177.chr8.nnic	NA	118313923	118316383	Gene ID= novel_gene_chr8_3178 TPM= 7.44 Transcript Type= NA
chr8	118923557	118952200	118923557	118952200	-	ENST00000297350.8@TNFRSF11B	ENST00000297350.8	protein_coding	118951792,118932931,118928738,118926494,118923557	118952200,118933300,118928929,118926718,118924762	Gene ID= ENSG00000164761.8 TPM= 280.41 Transcript Type= protein_coding
chr8	119208371	119245673	119208371	119245673	+	ENST00000614891.4@MAL2	ENST00000614891.4	protein_coding	119208371,119221587,119240165,119243417	119208604,119221757,119240320,119245673	Gene ID= ENSG00000147676.13 TPM= 2.12 Transcript Type= protein_coding
chr8	119416306	119424353	119416306	119424353	+	ENST00000259526.3@NOV	ENST00000259526.3	protein_coding	119416306,119416744,119418058,119419131,119422836	119416616,119416969,119418309,119419345,119424353	Gene ID= ENSG00000136999.4 TPM= 3.19 Transcript Type= protein_coding
chr8	119730775	119832863	119730775	119832863	-	ENST00000378164.6@TAF2	ENST00000378164.6	protein_coding	119832482,119831677,119819346,119806283,119803878,119801794,119797662,119796990,119795532,119793366,119791324,119789592,119788790,119788338,119785201,119783381,119781053,119778019,119762415,119760599,119758073,119756006,119746705,119744288,119742534,119730775	119832863,119831731,119819506,119806401,119804019,119802025,119797846,119797103,119795631,119793451,119791459,119789746,119788904,119788447,119785266,119783633,119781193,119778129,119762608,119760738,119758142,119756115,119746934,119744393,119742656,119732186	Gene ID= ENSG00000064313.11 TPM= 2.12 Transcript Type= protein_coding
chr8	119833976	119856010	119833976	119856010	-	ENST00000313655.4@DSCC1	ENST00000313655.4	protein_coding	119855614,119853047,119850382,119846990,119843609,119842776,119841794,119838259,119833976	119856010,119853215,119850516,119847080,119843747,119842828,119841948,119838407,119835001	Gene ID= ENSG00000136982.5 TPM= 1.06 Transcript Type= protein_coding
chr8	119873717	120050913	119873717	120050913	+	ENST00000286234.5@DEPTOR	ENST00000286234.5	protein_coding	119873717,119928400,119929815,119965232,120001525,120002977,120006805,120009029,120049576	119873968,119928578,119929938,119965410,120001710,120003111,120006875,120009133,120050913	Gene ID= ENSG00000155792.9 TPM= 2.12 Transcript Type= protein_coding
chr8	120125103	120162532	120125103	120162532	+	transcript3205.chr8.nic@COL14A1	transcript3205.chr8.nic	protein_coding	120125103,120147806,120158130,120162426	120125340,120147930,120158246,120162532	Gene ID= ENSG00000187955.11 TPM= 2.12 Transcript Type= NA
chr8	120395847	120445386	120395847	120445386	-	ENST00000306185.7@MRPL13	ENST00000306185.7	protein_coding	120445068,120443185,120432030,120425306,120419852,120413991,120395847	120445386,120443308,120432123,120425366,120419938,120414112,120396125	Gene ID= ENSG00000172172.7 TPM= 54.17 Transcript Type= protein_coding
chr8	120535745	120813273	120535745	120813273	-	ENST00000395601.7@SNTB1	ENST00000395601.7	protein_coding	120813085,120811273,120693692,120632444,120575086,120548762,120541810,120535745	120813273,120812069,120693908,120632651,120575225,120548958,120542000,120538969	Gene ID= ENSG00000172164.13 TPM= 2.12 Transcript Type= protein_coding
chr8	120648902	120651945	120648902	120651945	-	transcript3212.chr8.nnic@NA	transcript3212.chr8.nnic	NA	120648902	120651945	Gene ID= novel_gene_chr8_3213 TPM= 2.12 Transcript Type= NA
chr8	122781394	122974512	122781394	122974512	+	ENST00000314393.5@ZHX2	ENST00000314393.5	protein_coding	122781394,122863477,122951292,122973242	122781946,122863539,122954028,122974512	Gene ID= ENSG00000178764.7 TPM= 76.48 Transcript Type= protein_coding
chr8	122792669	122796184	122792669	122796184	+	transcript3220.chr8.nnic@NA	transcript3220.chr8.nnic	NA	122792669	122796184	Gene ID= novel_gene_chr8_3221 TPM= 3.19 Transcript Type= NA
chr8	123013164	123042423	123013164	123042423	-	ENST00000259512.8@DERL1	ENST00000259512.8	protein_coding	123041970,123030605,123024986,123023713,123022684,123021447,123019195,123013164	123042423,123030716,123025050,123023739,123022779,123021499,123019305,123015585	Gene ID= ENSG00000136986.9 TPM= 37.18 Transcript Type= protein_coding
chr8	123072680	123152150	123072680	123152150	+	ENST00000287380.5@TBC1D31	ENST00000287380.5	protein_coding	123072680,123077111,123082702,123084162,123093591,123097282,123100807,123105288,123109317,123109474,123120055,123126056,123126508,123128281,123129066,123130198,123134114,123140761,123142262,123144717,123150036,123151806	123072846,123077257,123082817,123084340,123093742,123097441,123101007,123105464,123109396,123109620,123120188,123126189,123126687,123128513,123129218,123130333,123134206,123140901,123142456,123144855,123150128,123152150	Gene ID= ENSG00000156787.16 TPM= 4.25 Transcript Type= protein_coding
chr8	123219957	123241398	123219957	123241398	-	ENST00000276704.5@C8orf76	ENST00000276704.5	protein_coding	123241230,123239049,123237798,123231300,123226500,123219957	123241398,123239144,123237941,123231757,123226632,123220297	Gene ID= ENSG00000189376.11 TPM= 16.99 Transcript Type= protein_coding
chr8	123252429	123274633	123252429	123274633	-	transcript3259.chr8.nic@ZHX1	transcript3259.chr8.nic	protein_coding	123274217,123267273,123252429	123274633,123267386,123256171	Gene ID= ENSG00000165156.14 TPM= 12.75 Transcript Type= NA
chr8	123416726	123442240	123416726	123442240	+	ENST00000523984.5@WDYHV1	ENST00000523984.5	protein_coding	123416726,123427924,123429983,123436453,123437210,123441306	123416856,123428023,123430033,123436601,123437334,123442240	Gene ID= ENSG00000156795.6 TPM= 2.12 Transcript Type= protein_coding
chr8	123416725	123442021	123416725	123442021	+	ENST00000287387.6@WDYHV1	ENST00000287387.6	protein_coding	123416725,123427924,123429983,123436453,123437210,123441306	123416932,123428023,123430033,123436601,123437334,123442021	Gene ID= ENSG00000156795.6 TPM= 4.25 Transcript Type= protein_coding
chr8	123497889	123541206	123497889	123541206	-	ENST00000517956.5@FBXO32	ENST00000517956.5	protein_coding	123540899,123534702,123533191,123531898,123514240,123513198,123506392,123504604,123497889	123541206,123534814,123533240,123531990,123514333,123513382,123506574,123504747,123503462	Gene ID= ENSG00000156804.7 TPM= 118.96 Transcript Type= protein_coding
chr8	123526996	123541190	123526996	123541190	-	ENST00000520511.1@FBXO32	ENST00000520511.1	protein_coding	123540899,123534702,123533191,123531898,123526996	123541190,123534814,123533240,123531990,123527254	Gene ID= ENSG00000156804.7 TPM= 9.56 Transcript Type= retained_intron
chr8	123523793	123526518	123523793	123526518	-	transcript3292.chr8.nnic@NA	transcript3292.chr8.nnic	NA	123523793	123526518	Gene ID= novel_gene_chr8_3293 TPM= 2.12 Transcript Type= NA
chr8	123644445	123653772	123644445	123653772	-	transcript3297.chr8.nnic@KLHL38	transcript3297.chr8.nnic	protein_coding	123653586,123651577,123646909,123644445	123653772,123652927,123647014,123646028	Gene ID= ENSG00000175946.8 TPM= 10.62 Transcript Type= NA
chr8	124306189	124372482	124306189	124372482	-	transcript3309.chr8.nnic@TMEM65	transcript3309.chr8.nnic	protein_coding	124371854,124330748,124327354,124323321,124322105,124320086,124313965,124306189	124372482,124330792,124327421,124323375,124322147,124320191,124314061,124307447	Gene ID= ENSG00000164983.7 TPM= 4.25 Transcript Type= NA
chr8	124450826	124452855	124450826	124452855	+	transcript3321.chr8.nnic@NA	transcript3321.chr8.nnic	NA	124450826	124452855	Gene ID= novel_gene_chr8_3322 TPM= 6.37 Transcript Type= NA
chr8	124472810	124474576	124472810	124474576	-	ENST00000530778.1@RNF139-AS1	ENST00000530778.1	lincRNA	124472810	124474576	Gene ID= ENSG00000245149.3 TPM= 3.19 Transcript Type= lincRNA
chr8	124474738	124487914	124474738	124487914	+	ENST00000303545.3@RNF139	ENST00000303545.3	protein_coding	124474738,124485831	124475290,124487914	Gene ID= ENSG00000170881.4 TPM= 22.31 Transcript Type= protein_coding
chr8	124488508	124539094	124488508	124539094	-	transcript3323.chr8.nic@TATDN1	transcript3323.chr8.nic	protein_coding	124539025,124522937,124522151,124518742,124515887,124515746,124508603,124508474,124504271,124495472,124493833,124488508	124539094,124523002,124522200,124518881,124516030,124515788,124508688,124508514,124504347,124495542,124493959,124488696	Gene ID= ENSG00000147687.18 TPM= 3.72 Transcript Type= NA
chr8	124488508	124539084	124488508	124539084	-	ENST00000276692.10@TATDN1	ENST00000276692.10	protein_coding	124539025,124522937,124522151,124518818,124515887,124515746,124508603,124508474,124504271,124495472,124493833,124488508	124539084,124523002,124522200,124518881,124516030,124515788,124508688,124508514,124504347,124495542,124493959,124488696	Gene ID= ENSG00000147687.18 TPM= 11.15 Transcript Type= protein_coding
chr8	124504174	124539082	124504174	124539082	-	ENST00000605953.5@TATDN1	ENST00000605953.5	protein_coding	124539025,124522937,124522151,124518818,124515887,124515746,124508603,124508474,124504174	124539082,124523002,124522200,124518881,124516030,124515788,124508688,124508514,124504347	Gene ID= ENSG00000147687.18 TPM= 2.12 Transcript Type= protein_coding
chr8	124539103	124549979	124539103	124549979	+	ENST00000276689.7@NDUFB9	ENST00000276689.7	protein_coding	124539103,124543087,124547000,124549761	124539287,124543279,124547113,124549979	Gene ID= ENSG00000147684.7 TPM= 380.43 Transcript Type= protein_coding
chr8	124539144	124549978	124539144	124549978	+	ENST00000517367.1@NDUFB9	ENST00000517367.1	protein_coding	124539144,124543120,124547000,124549761	124539287,124543279,124547113,124549978	Gene ID= ENSG00000147684.7 TPM= 27.09 Transcript Type= protein_coding
chr8	124973298	124979389	124973298	124979389	+	ENST00000319286.5@ZNF572	ENST00000319286.5	protein_coding	124973298,124975606,124976348	124973416,124975719,124979389	Gene ID= ENSG00000180938.5 TPM= 2.12 Transcript Type= protein_coding
chr8	124998506	125022283	124998506	125022283	+	ENST00000265896.9@SQLE	ENST00000265896.9	protein_coding	124998506,125003176,125005525,125007391,125008971,125009172,125011537,125018059,125018631,125020784,125021753	124999694,125003428,125005705,125007487,125009084,125009343,125011632,125018201,125018727,125020871,125022283	Gene ID= ENSG00000104549.11 TPM= 11.68 Transcript Type= protein_coding
chr8	125024260	125091840	125024260	125091840	-	ENST00000318410.11@WASHC5	ENST00000318410.11	protein_coding	125091615,125083713,125083113,125082383,125081661,125078738,125076348,125074998,125073153,125067592,125063522,125061082,125059376,125059222,125057556,125056677,125055591,125050564,125049006,125047207,125044536,125043992,125043825,125039795,125038830,125037237,125032241,125028620,125024260	125091840,125084022,125083258,125082467,125081761,125078930,125076500,125075111,125073324,125067719,125063651,125061194,125059542,125059297,125057666,125056817,125055671,125050665,125049185,125047331,125044698,125044094,125043904,125039898,125038959,125037333,125032394,125028707,125024673	Gene ID= ENSG00000164961.15 TPM= 28.15 Transcript Type= protein_coding
chr8	125024267	125091792	125024267	125091792	-	transcript3354.chr8.nic@WASHC5	transcript3354.chr8.nic	protein_coding	125091615,125083113,125082383,125081661,125078738,125076348,125074998,125073153,125067592,125063522,125061082,125059376,125059222,125057556,125056677,125055591,125050564,125049006,125047207,125044536,125043992,125043825,125039795,125038830,125037237,125032241,125028620,125024267	125091792,125083258,125082467,125081761,125078930,125076500,125075111,125073324,125067719,125063651,125061194,125059542,125059297,125057666,125056817,125055671,125050665,125049185,125047331,125044698,125044094,125043904,125039898,125038959,125037333,125032394,125028707,125024673	Gene ID= ENSG00000164961.15 TPM= 8.5 Transcript Type= NA
chr8	125035362	125091793	125035362	125091793	-	transcript3355.chr8.nnic@WASHC5	transcript3355.chr8.nnic	protein_coding	125091615,125083713,125083113,125082383,125081661,125078738,125076348,125074998,125073153,125067592,125063522,125061082,125059376,125059222,125057556,125056677,125055591,125050564,125049006,125047207,125044536,125043992,125043825,125039795,125038830,125037237,125035362	125091793,125084022,125083258,125082467,125081761,125078930,125076500,125075111,125073324,125067719,125063651,125061194,125059542,125059297,125057666,125056817,125055671,125050665,125049185,125047331,125044698,125044094,125043904,125039898,125038959,125037333,125036220	Gene ID= ENSG00000164961.15 TPM= 2.66 Transcript Type= NA
chr8	125091853	125367120	125091853	125367120	+	ENST00000287437.7@NSMCE2	ENST00000287437.7	protein_coding	125091853,125102051,125102317,125151171,125182103,125357219,125357712,125366768	125091958,125102146,125102487,125151277,125182256,125357319,125357818,125367120	Gene ID= ENSG00000156831.7 TPM= 5.31 Transcript Type= protein_coding
chr8	125091870	125367075	125091870	125367075	+	ENST00000522563.5@NSMCE2	ENST00000522563.5	protein_coding	125091870,125102317,125151171,125182103,125357219,125357712,125366768	125091958,125102487,125151277,125182256,125357319,125357818,125367075	Gene ID= ENSG00000156831.7 TPM= 1.06 Transcript Type= protein_coding
chr8	125296394	125298085	125296394	125298085	-	transcript3363.chr8.nnic@NA	transcript3363.chr8.nnic	NA	125296394	125298085	Gene ID= novel_gene_chr8_3364 TPM= 2.12 Transcript Type= NA
chr8	125430321	125438405	125430321	125438405	+	ENST00000311922.3@TRIB1	ENST00000311922.3	protein_coding	125430321,125433317,125436006	125431262,125433609,125438405	Gene ID= ENSG00000173334.3 TPM= 75.41 Transcript Type= protein_coding
chr8	125941129	125951189	125941129	125951189	-	ENST00000500989.2@LINC00861	ENST00000500989.2	lincRNA	125950914,125941129	125951189,125946182	Gene ID= ENSG00000245164.6 TPM= 1.06 Transcript Type= lincRNA
chr8	126552442	126558393	126552442	126558393	-	ENST00000304916.3@FAM84B	ENST00000304916.3	protein_coding	126558034,126552442	126558393,126557485	Gene ID= ENSG00000168672.3 TPM= 5.31 Transcript Type= protein_coding
chr8	127736069	127741434	127736069	127741434	+	ENST00000621592.5@MYC	ENST00000621592.5	protein_coding	127736069,127738248,127740396	127736623,127739019,127741434	Gene ID= ENSG00000136997.17 TPM= 28.68 Transcript Type= protein_coding
chr8	129841470	130016440	129841470	130016440	-	transcript3380.chr8.nic@FAM49B	transcript3380.chr8.nic	protein_coding	130016370,129970943,129912470,129904499,129903312,129879389,129871375,129862229,129855611,129854266,129852162,129850835,129849243,129846804,129841470	130016440,129970995,129912515,129904585,129903350,129879471,129871496,129862334,129855747,129854343,129852278,129850914,129849369,129846874,129842205	Gene ID= ENSG00000153310.19 TPM= 2.12 Transcript Type= NA
chr8	129841470	130016788	129841470	130016788	-	transcript3381.chr8.nic@FAM49B	transcript3381.chr8.nic	protein_coding	130016370,129970943,129904499,129903312,129879389,129871375,129862229,129855611,129854266,129852162,129850835,129849243,129846804,129841470	130016788,129970995,129904585,129903350,129879471,129871496,129862334,129855747,129854343,129852278,129850914,129849369,129846874,129842205	Gene ID= ENSG00000153310.19 TPM= 10.62 Transcript Type= NA
chr8	129841470	130016629	129841470	130016629	-	transcript3387.chr8.nic@FAM49B	transcript3387.chr8.nic	protein_coding	130016370,129970943,129904499,129903312,129871375,129862229,129855611,129854266,129852162,129850835,129849243,129846804,129841470	130016629,129970995,129904585,129903350,129871496,129862334,129855747,129854343,129852278,129850914,129849369,129846874,129842205	Gene ID= ENSG00000153310.19 TPM= 2.12 Transcript Type= NA
chr8	129839593	129939832	129839593	129939832	-	ENST00000519824.6@FAM49B	ENST00000519824.6	protein_coding	129939608,129903312,129879389,129871375,129862229,129855611,129854266,129852162,129850835,129849243,129846804,129839593	129939832,129903350,129879471,129871496,129862334,129855747,129854343,129852278,129850914,129849369,129846874,129842205	Gene ID= ENSG00000153310.19 TPM= 3.19 Transcript Type= protein_coding
chr8	129841470	130016616	129841470	130016616	-	transcript3395.chr8.nic@FAM49B	transcript3395.chr8.nic	protein_coding	130016370,129970943,129903312,129871375,129862229,129855611,129854266,129852162,129850835,129849243,129846804,129841470	130016616,129970995,129903350,129871496,129862334,129855747,129854343,129852278,129850914,129849369,129846874,129842205	Gene ID= ENSG00000153310.19 TPM= 2.12 Transcript Type= NA
chr8	129841484	130016451	129841484	130016451	-	ENST00000517654.5@FAM49B	ENST00000517654.5	protein_coding	130016370,129970943,129903312,129879389,129871375,129862229,129855611,129854266,129852162,129850835,129849243,129846804,129841484	130016451,129970995,129903350,129879471,129871496,129862334,129855747,129854343,129852278,129850914,129849369,129846874,129842205	Gene ID= ENSG00000153310.19 TPM= 2.12 Transcript Type= protein_coding
chr8	130237660	130242281	130237660	130242281	+	transcript3406.chr8.nnic@NA	transcript3406.chr8.nnic	NA	130237660	130242281	Gene ID= novel_gene_chr8_3407 TPM= 8.5 Transcript Type= NA
chr8	130310150	130311773	130310150	130311773	+	transcript3408.chr8.nnic@NA	transcript3408.chr8.nnic	NA	130310150	130311773	Gene ID= novel_gene_chr8_3409 TPM= 2.12 Transcript Type= NA
chr8	130352213	130353867	130352213	130353867	+	transcript3410.chr8.nnic@NA	transcript3410.chr8.nnic	NA	130352213	130353867	Gene ID= novel_gene_chr8_3411 TPM= 4.25 Transcript Type= NA
chr8	130432166	130436363	130432166	130436363	+	transcript3412.chr8.nnic@NA	transcript3412.chr8.nnic	NA	130432166	130436363	Gene ID= novel_gene_chr8_3413 TPM= 2.12 Transcript Type= NA
chr8	131904074	132013527	131904074	132013527	+	transcript3419.chr8.nic@EFR3A	transcript3419.chr8.nic	protein_coding	131904074,131940499,131944745,131946483,131949969,131953818,131955768,131959585,131968295,131970476,131976027,131977041,131978847,131979346,131984139,131984929,131986194,131987575,131996406,132001759,132002603,132003236,132010790	131904322,131940644,131944872,131946633,131950090,131953967,131955905,131959663,131968430,131970643,131976141,131977092,131979019,131979421,131984300,131985060,131986261,131987702,131996497,132001807,132002706,132003285,132013527	Gene ID= ENSG00000132294.14 TPM= 6.9 Transcript Type= NA
chr8	131904088	132013642	131904088	132013642	+	ENST00000254624.9@EFR3A	ENST00000254624.9	protein_coding	131904088,131940499,131944745,131946483,131949969,131953818,131955768,131959585,131968295,131970476,131976027,131977041,131978847,131979346,131984139,131984929,131986194,131987575,131996406,132001759,132002603,132003236,132010790	131904322,131940575,131944872,131946633,131950090,131953967,131955905,131959663,131968430,131970643,131976141,131977092,131979019,131979421,131984300,131985060,131986261,131987702,131996497,132001807,132002706,132003285,132013642	Gene ID= ENSG00000132294.14 TPM= 2.12 Transcript Type= protein_coding
chr8	132475257	132477363	132475257	132477363	+	transcript3425.chr8.nnic@NA	transcript3425.chr8.nnic	NA	132475257	132477363	Gene ID= novel_gene_chr8_3426 TPM= 2.12 Transcript Type= NA
chr8	132571953	132675617	132571953	132675617	-	ENST00000620350.4@LRRC6	ENST00000620350.4	protein_coding	132675484,132661460,132656830,132637935,132632740,132625272,132622611,132615038,132611294,132610166,132583694,132571953	132675617,132661627,132656907,132638107,132632963,132625454,132622688,132615097,132611363,132610261,132583779,132572480	Gene ID= ENSG00000129295.8 TPM= 1.06 Transcript Type= protein_coding
chr8	132709948	132760701	132709948	132760701	-	transcript3431.chr8.nic@TMEM71	transcript3431.chr8.nic	protein_coding	132760476,132758840,132757234,132751785,132746942,132727798,132722040,132714154,132713995,132709948	132760701,132758915,132757294,132751997,132747114,132727986,132722115,132714215,132714052,132710982	Gene ID= ENSG00000165071.14 TPM= 10.62 Transcript Type= NA
chr8	132746009	132757847	132746009	132757847	-	transcript3437.chr8.nnic@TMEM71	transcript3437.chr8.nnic	protein_coding	132757234,132751785,132746489,132746009	132757847,132751997,132747114,132746378	Gene ID= ENSG00000165071.14 TPM= 3.19 Transcript Type= NA
chr8	132746009	132757847	132746009	132757847	-	transcript3440.chr8.nic@TMEM71	transcript3440.chr8.nic	protein_coding	132757234,132751785,132746009	132757847,132751997,132747114	Gene ID= ENSG00000165071.14 TPM= 9.56 Transcript Type= NA
chr8	132744668	132746166	132744668	132746166	+	transcript3443.chr8.nnic@NA	transcript3443.chr8.nnic	NA	132744668	132746166	Gene ID= novel_gene_chr8_3444 TPM= 2.12 Transcript Type= NA
chr8	132775344	132848807	132775344	132848807	+	transcript3451.chr8.nic@PHF20L1	transcript3451.chr8.nic	protein_coding	132775344,132777792,132794410,132794733,132798772,132803819,132804615,132811046,132814637,132816888,132817339,132824004,132825264,132832235,132836540,132837712,132839387,132842515,132844156,132845781	132775645,132777911,132794581,132794817,132798860,132804032,132804740,132811128,132814889,132817076,132817545,132824060,132825371,132832399,132836721,132837811,132839582,132842875,132844318,132848807	Gene ID= ENSG00000129292.20 TPM= 7.97 Transcript Type= NA
chr8	132775308	132825371	132775308	132825371	+	transcript3464.chr8.nic@PHF20L1	transcript3464.chr8.nic	protein_coding	132775308,132777796,132794410,132794733,132798772,132803819,132804615,132811046,132814637,132816888,132817339,132824004,132825264	132775645,132777911,132794581,132794817,132798860,132804032,132804740,132811128,132814889,132817076,132817545,132824060,132825371	Gene ID= ENSG00000129292.20 TPM= 46.74 Transcript Type= NA
chr8	132775344	132813188	132775344	132813188	+	transcript3481.chr8.nic@PHF20L1	transcript3481.chr8.nic	protein_coding	132775344,132777792,132794410,132794733,132798772,132803819,132804615,132811046	132775645,132777911,132794581,132794817,132798860,132804032,132804740,132813188	Gene ID= ENSG00000129292.20 TPM= 3.72 Transcript Type= NA
chr8	132775398	132799960	132775398	132799960	+	ENST00000485595.5@PHF20L1	ENST00000485595.5	protein_coding	132775398,132777796,132794410,132794733,132798772	132775645,132777911,132794581,132794817,132799960	Gene ID= ENSG00000129292.20 TPM= 2.12 Transcript Type= protein_coding
chr8	132775408	132812316	132775408	132812316	+	ENST00000337920.8@PHF20L1	ENST00000337920.8	protein_coding	132775408,132777796,132794410,132794733,132798772,132803819,132804615,132811046	132775645,132777911,132794581,132794817,132798860,132804032,132804740,132812316	Gene ID= ENSG00000129292.20 TPM= 3.19 Transcript Type= protein_coding
chr8	132791256	132792493	132791256	132792493	-	transcript3490.chr8.nnic@NA	transcript3490.chr8.nnic	NA	132791256	132792493	Gene ID= novel_gene_chr8_3491 TPM= 7.44 Transcript Type= NA
chr8	133036724	133103054	133036724	133103054	-	ENST00000338087.9@SLA	ENST00000338087.9	protein_coding	133102553,133074853,133060100,133050816,133049902,133047830,133044984,133039998,133036724	133103054,133075130,133060200,133050915,133049988,133047933,133045115,133040130,133038737	Gene ID= ENSG00000155926.13 TPM= 4.25 Transcript Type= protein_coding
chr8	133237171	133297237	133237171	133297237	-	ENST00000323851.11@NDRG1	ENST00000323851.11	protein_coding	133297134,133284249,133280232,133264547,133262047,133259168,133258366,133256777,133254539,133250440,133248715,133247875,133246616,133244355,133242023,133237171	133297237,133284329,133280267,133264652,133262167,133259230,133258426,133256863,133254595,133250543,133248771,133247926,133246663,133244390,133242074,133239119	Gene ID= ENSG00000104419.14 TPM= 192.25 Transcript Type= protein_coding
chr8	133247924	133250926	133247924	133250926	+	transcript3499.chr8.nnic@NA	transcript3499.chr8.nnic	NA	133247924	133250926	Gene ID= novel_gene_chr8_3500 TPM= 3.19 Transcript Type= NA
chr8	133458873	133571887	133458873	133571887	-	transcript3508.chr8.nic@ST3GAL1	transcript3508.chr8.nic	protein_coding	133571693,133545774,133476278,133475719,133465894,133464778,133463414,133461875,133458873	133571887,133545926,133476600,133476074,133466090,133464957,133463459,133461994,133459937	Gene ID= ENSG00000008513.14 TPM= 4.6 Transcript Type= NA
chr8	133458873	133571996	133458873	133571996	-	transcript3513.chr8.nic@ST3GAL1	transcript3513.chr8.nic	protein_coding	133571693,133545774,133475719,133465894,133464778,133463414,133461875,133458873	133571996,133545926,133476600,133466090,133464957,133463459,133461994,133459937	Gene ID= ENSG00000008513.14 TPM= 10.97 Transcript Type= NA
chr8	133458945	133571849	133458945	133571849	-	ENST00000522652.5@ST3GAL1	ENST00000522652.5	protein_coding	133571693,133545774,133499135,133476278,133475719,133465894,133464778,133463414,133461875,133458945	133571849,133545926,133499189,133476600,133476074,133466090,133464957,133463459,133461994,133459937	Gene ID= ENSG00000008513.14 TPM= 124.62 Transcript Type= protein_coding
chr8	133456042	133459131	133456042	133459131	-	transcript3525.chr8.nnic@NA	transcript3525.chr8.nnic	NA	133456042	133459131	Gene ID= novel_gene_chr8_3526 TPM= 40.36 Transcript Type= NA
chr8	133468459	133472867	133468459	133472867	+	transcript3519.chr8.nnic@NA	transcript3519.chr8.nnic	NA	133468459	133472867	Gene ID= novel_gene_chr8_3520 TPM= 4.25 Transcript Type= NA
chr8	133490824	133493861	133490824	133493861	+	transcript3521.chr8.nnic@NA	transcript3521.chr8.nnic	NA	133490824	133493861	Gene ID= novel_gene_chr8_3522 TPM= 6.37 Transcript Type= NA
chr8	133521140	133525740	133521140	133525740	-	transcript3531.chr8.nnic@NA	transcript3531.chr8.nnic	NA	133521140	133525740	Gene ID= novel_gene_chr8_3532 TPM= 2.12 Transcript Type= NA
chr8	133529344	133531836	133529344	133531836	+	transcript3523.chr8.nnic@NA	transcript3523.chr8.nnic	NA	133529344	133531836	Gene ID= novel_gene_chr8_3524 TPM= 13.81 Transcript Type= NA
chr8	133535527	133540221	133535527	133540221	-	transcript3527.chr8.nnic@NA	transcript3527.chr8.nnic	NA	133535527	133540221	Gene ID= novel_gene_chr8_3528 TPM= 4.25 Transcript Type= NA
chr8	133570884	133571617	133570884	133571617	-	transcript3535.chr8.nnic@NA	transcript3535.chr8.nnic	NA	133570884	133571617	Gene ID= novel_gene_chr8_3536 TPM= 2.12 Transcript Type= NA
chr8	133572163	133573854	133572163	133573854	+	transcript3517.chr8.nnic@NA	transcript3517.chr8.nnic	NA	133572163	133573854	Gene ID= novel_gene_chr8_3518 TPM= 15.93 Transcript Type= NA
chr8	134562391	134566408	134562391	134566408	+	transcript3537.chr8.nnic@NA	transcript3537.chr8.nnic	NA	134562391	134566408	Gene ID= novel_gene_chr8_3538 TPM= 2.12 Transcript Type= NA
chr8	135457457	135647610	135457457	135647610	+	ENST00000355849.9@KHDRBS3	ENST00000355849.9	protein_coding	135457457,135521237,135542654,135548754,135557448,135581878,135606955,135645059,135646993	135457954,135521355,135542770,135548900,135557587,135582073,135607037,135645117,135647610	Gene ID= ENSG00000131773.13 TPM= 7.44 Transcript Type= protein_coding
chr8	139730345	140238529	139730345	140238529	-	transcript3553.chr8.nic@TRAPPC9	transcript3553.chr8.nic	protein_coding	140238341,140221459,140023937,139988726,139910147,139885879,139731979,139730345	140238529,140221583,140024079,139988836,139910300,139885969,139732202,139731228	Gene ID= ENSG00000167632.14 TPM= 7.97 Transcript Type= NA
chr8	139730345	140457762	139730345	140457762	-	ENST00000438773.2@TRAPPC9	ENST00000438773.2	protein_coding	140457639,140450790,140439052,140435112,140426615,140405577,140397620,140370964,140360050,140311248,140300469,140290993,140287608,140283889,140275658,140252777,140221459,140023937,139988726,139910147,139885879,139731979,139730345	140457762,140451383,140439197,140435240,140426641,140405698,140397745,140371180,140360193,140311374,140300614,140291078,140287734,140284021,140275821,140252929,140221583,140024079,139988836,139910300,139885969,139732202,139731228	Gene ID= ENSG00000167632.14 TPM= 10.09 Transcript Type= protein_coding
chr8	140284107	140284333	140284107	140284333	+	transcript3555.chr8.nnic@NA	transcript3555.chr8.nnic	NA	140284107	140284333	Gene ID= novel_gene_chr8_3556 TPM= 3.19 Transcript Type= NA
chr8	140511298	140517137	140511298	140517137	+	ENST00000220913.9@CHRAC1	ENST00000220913.9	protein_coding	140511298,140514369,140515126	140511646,140514495,140517137	Gene ID= ENSG00000104472.9 TPM= 28.68 Transcript Type= protein_coding
chr8	140543274	140548333	140543274	140548333	-	transcript3569.chr8.nic@AGO2	transcript3569.chr8.nic	protein_coding	140547468,140543274	140548333,140544303	Gene ID= ENSG00000123908.11 TPM= 2.12 Transcript Type= NA
chr8	140522995	140527034	140522995	140527034	-	transcript3572.chr8.nnic@NA	transcript3572.chr8.nnic	NA	140522995	140527034	Gene ID= novel_gene_chr8_3573 TPM= 8.5 Transcript Type= NA
chr8	140565874	140568298	140565874	140568298	+	transcript3570.chr8.nnic@NA	transcript3570.chr8.nnic	NA	140565874	140568298	Gene ID= novel_gene_chr8_3571 TPM= 2.12 Transcript Type= NA
chr8	140658405	141001379	140658405	141001379	-	ENST00000519993.5@PTK2	ENST00000519993.5	protein_coding	141001125,140890543,140864312,140846599,140846260,140830472,140818880,140818277,140803543,140800459,140793354,140789474,140769575,140764234,140762368,140761165,140752232,140746760,140744652,140743230,140739018,140735251,140717598,140706119,140702570,140700891,140686632,140675460,140674298,140669727,140668269,140664917,140658405	141001379,140890769,140864399,140846678,140846322,140830526,140819020,140818354,140803650,140800576,140793384,140789526,140769592,140764290,140762388,140761262,140752316,140746860,140744767,140743330,140739107,140735455,140717709,140706205,140702707,140701022,140686694,140675499,140674404,140669735,140668424,140664997,140659678	Gene ID= ENSG00000169398.19 TPM= 3.61 Transcript Type= nonsense_mediated_decay
chr8	140658405	141001312	140658405	141001312	-	transcript3582.chr8.nic@PTK2	transcript3582.chr8.nic	protein_coding	141001125,140925661,140890543,140879471,140864312,140846599,140846260,140830472,140818880,140818277,140803543,140800459,140793354,140789474,140764234,140762368,140761165,140752232,140746760,140744652,140743230,140739018,140735251,140717598,140706119,140702570,140700891,140686632,140675460,140674298,140668269,140664917,140658405	141001312,140925749,140890769,140879637,140864399,140846678,140846322,140830526,140819020,140818354,140803650,140800576,140793384,140789526,140764290,140762388,140761262,140752316,140746860,140744767,140743330,140739107,140735455,140717709,140706205,140702707,140701022,140686694,140675499,140674404,140668424,140664997,140659678	Gene ID= ENSG00000169398.19 TPM= 4.67 Transcript Type= NA
chr8	140658405	141001284	140658405	141001284	-	transcript3584.chr8.nnic@PTK2	transcript3584.chr8.nnic	protein_coding	141001125,140983528,140925661,140890543,140879471,140864312,140846599,140846260,140830472,140818880,140818277,140803543,140800459,140793354,140789474,140764234,140761165,140752232,140746760,140744652,140743230,140739018,140735251,140717598,140706119,140702570,140700891,140686632,140675460,140674298,140668269,140664917,140658405	141001284,140983642,140925749,140890769,140879637,140864399,140846678,140846322,140830526,140819020,140818354,140803650,140800576,140793384,140789526,140764290,140761262,140752316,140746860,140744767,140743330,140739107,140735455,140717709,140706205,140702707,140701022,140686694,140675499,140674404,140668424,140664997,140659678	Gene ID= ENSG00000169398.19 TPM= 3.96 Transcript Type= NA
chr8	140658405	141001045	140658405	141001045	-	transcript3592.chr8.nic@PTK2	transcript3592.chr8.nic	protein_coding	141000880,140890543,140879471,140864312,140846599,140846260,140830472,140818880,140818277,140803543,140800459,140793354,140789474,140764234,140761165,140752232,140746760,140744652,140743230,140739018,140735251,140717598,140706119,140702570,140700891,140686632,140675460,140674298,140668269,140664917,140658405	141001045,140890769,140879637,140864399,140846678,140846322,140830526,140819020,140818354,140803650,140800576,140793384,140789526,140764290,140761262,140752316,140746860,140744767,140743330,140739107,140735455,140717709,140706205,140702707,140701022,140686694,140675499,140674404,140668424,140664997,140659678	Gene ID= ENSG00000169398.19 TPM= 3.96 Transcript Type= NA
chr8	140658405	141001280	140658405	141001280	-	transcript3593.chr8.nic@PTK2	transcript3593.chr8.nic	protein_coding	141001125,140890543,140879471,140864312,140846599,140846260,140830472,140818880,140818277,140803543,140800459,140793354,140789474,140764234,140761165,140752232,140746760,140744652,140743230,140739018,140735251,140717598,140706119,140702570,140700891,140686632,140675460,140674298,140668269,140664917,140658405	141001280,140890769,140879637,140864399,140846678,140846322,140830526,140819020,140818354,140803650,140800576,140793384,140789526,140764290,140761262,140752316,140746860,140744767,140743330,140739107,140735455,140717709,140706205,140702707,140701022,140686694,140675499,140674404,140668424,140664997,140659678	Gene ID= ENSG00000169398.19 TPM= 7.15 Transcript Type= NA
chr8	141124673	141128330	141124673	141128330	-	transcript3605.chr8.nnic@AC040970.1	transcript3605.chr8.nnic	antisense_RNA	141128067,141126206,141124673	141128330,141126471,141125858	Gene ID= ENSG00000253210.1 TPM= 4.25 Transcript Type= NA
chr8	141145855	141147622	141145855	141147622	-	transcript3611.chr8.nnic@NA	transcript3611.chr8.nnic	NA	141145855	141147622	Gene ID= novel_gene_chr8_3612 TPM= 3.19 Transcript Type= NA
chr8	141128638	141195808	141128638	141195808	+	ENST00000519811.5@DENND3	ENST00000519811.5	protein_coding	141128638,141136509,141138022,141141203,141144148,141150834,141151619,141155849,141160632,141163333,141165186,141166190,141168004,141175200,141176591,141178067,141180747,141185139,141188986,141190284,141192331,141192526,141194033	141128809,141136791,141138137,141141324,141144259,141150953,141151837,141155970,141160787,141163429,141165289,141166389,141168525,141175459,141176761,141178196,141180854,141185278,141189146,141190417,141192449,141192663,141195808	Gene ID= ENSG00000105339.10 TPM= 4.25 Transcript Type= protein_coding
chr8	141417832	141431520	141417832	141431520	+	transcript3639.chr8.nnic@PTP4A3	transcript3639.chr8.nnic	protein_coding	141417832,141421388,141422181,141425048,141426939,141427750,141430927	141418018,141421610,141422345,141425140,141427069,141427824,141431520	Gene ID= ENSG00000184489.11 TPM= 42.44 Transcript Type= NA
chr8	141417908	141431520	141417908	141431520	+	transcript3663.chr8.nnic@PTP4A3	transcript3663.chr8.nnic	protein_coding	141417908,141421388,141425048,141426939,141427750,141430927	141418018,141422273,141425140,141427069,141427824,141431520	Gene ID= ENSG00000184489.11 TPM= 60.09 Transcript Type= NA
chr8	141416126	141431520	141416126	141431520	+	transcript3665.chr8.nnic@PTP4A3	transcript3665.chr8.nnic	protein_coding	141416126,141421388,141425048,141426939,141427750,141430927	141418018,141422345,141425140,141427069,141427824,141431520	Gene ID= ENSG00000184489.11 TPM= 156.28 Transcript Type= NA
chr8	141421388	141432454	141421388	141432454	+	ENST00000329397.5@PTP4A3	ENST00000329397.5	protein_coding	141421388,141425048,141426939,141427750,141430927	141422345,141425140,141427069,141427824,141432454	Gene ID= ENSG00000184489.11 TPM= 57.18 Transcript Type= protein_coding
chr8	141419573	141421648	141419573	141421648	-	transcript3691.chr8.nnic@NA	transcript3691.chr8.nnic	NA	141419573	141421648	Gene ID= novel_gene_chr8_3692 TPM= 13.03 Transcript Type= NA
chr8	141434499	141437954	141434499	141437954	+	transcript3698.chr8.nnic@AC100803.3	transcript3698.chr8.nnic	antisense_RNA	141434499,141437318,141437710	141437058,141437520,141437954	Gene ID= ENSG00000271959.1 TPM= 6.37 Transcript Type= NA
chr8	141434781	141437954	141434781	141437954	+	transcript3702.chr8.nic@AC100803.3	transcript3702.chr8.nic	antisense_RNA	141434781,141437710	141437520,141437954	Gene ID= ENSG00000271959.1 TPM= 9.56 Transcript Type= NA
chr8	141434545	141437954	141434545	141437954	+	ENST00000606664.1@AC100803.3	ENST00000606664.1	antisense_RNA	141434545,141437326,141437710	141437065,141437520,141437954	Gene ID= ENSG00000271959.1 TPM= 12.75 Transcript Type= antisense_RNA
chr8	141439655	141444401	141439655	141444401	+	transcript3703.chr8.nnic@NA	transcript3703.chr8.nnic	NA	141439655	141444401	Gene ID= novel_gene_chr8_3704 TPM= 5.31 Transcript Type= NA
chr8	142270475	142275235	142270475	142275235	-	transcript3716.chr8.nic@TSNARE1	transcript3716.chr8.nic	protein_coding	142274781,142270475	142275235,142271691	Gene ID= ENSG00000171045.14 TPM= 8.5 Transcript Type= NA
chr8	142611044	142614472	142611044	142614472	-	ENST00000356613.3@ARC	ENST00000356613.3	protein_coding	142612484,142612108,142611044	142614472,142612252,142611857	Gene ID= ENSG00000198576.3 TPM= 4.25 Transcript Type= protein_coding
chr8	142657460	142669994	142657460	142669994	-	ENST00000612905.1@JRK	ENST00000612905.1	protein_coding	142669932,142657460	142669994,142666520	Gene ID= ENSG00000234616.8 TPM= 6.37 Transcript Type= protein_coding
chr8	142657463	142669970	142657463	142669970	-	ENST00000615982.4@JRK	ENST00000615982.4	protein_coding	142669932,142664478,142658822,142657463	142669970,142666520,142658944,142658080	Gene ID= ENSG00000234616.8 TPM= 4.25 Transcript Type= protein_coding
chr8	142727191	142736925	142727191	142736925	+	transcript3727.chr8.nnic@THEM6	transcript3727.chr8.nnic	protein_coding	142727191,142735326	142727700,142736925	Gene ID= ENSG00000130193.7 TPM= 2.12 Transcript Type= NA
chr8	142727203	142736927	142727203	142736927	+	ENST00000336138.3@THEM6	ENST00000336138.3	protein_coding	142727203,142735326	142727859,142736927	Gene ID= ENSG00000130193.7 TPM= 65.85 Transcript Type= protein_coding
chr8	142732713	142736824	142732713	142736824	-	transcript3730.chr8.nnic@NA	transcript3730.chr8.nnic	NA	142732713	142736824	Gene ID= novel_gene_chr8_3731 TPM= 2.12 Transcript Type= NA
chr8	142764334	142776021	142764334	142776021	-	ENST00000523332.5@LYNX1	ENST00000523332.5	protein_coding	142775906,142775593,142775341,142765036,142764334	142776021,142775694,142775363,142765140,142764587	Gene ID= ENSG00000284505.1 TPM= 2.12 Transcript Type= protein_coding
chr8	142771197	142777328	142771197	142777328	-	ENST00000614491.1@LYNX1	ENST00000614491.1	protein_coding	142777106,142775906,142775593,142771197	142777328,142776121,142775694,142775363	Gene ID= ENSG00000180155.19 TPM= 99.49 Transcript Type= protein_coding
chr8	142771197	142777262	142771197	142777262	-	transcript3742.chr8.nic@LYNX1	transcript3742.chr8.nic	protein_coding	142777106,142775593,142771197	142777262,142775694,142775363	Gene ID= ENSG00000180155.19 TPM= 85.68 Transcript Type= NA
chr8	142771197	142777810	142771197	142777810	-	ENST00000621401.4@LYNX1	ENST00000621401.4	protein_coding	142777759,142775906,142775593,142771197	142777810,142776121,142775694,142775363	Gene ID= ENSG00000180155.19 TPM= 92.06 Transcript Type= protein_coding
chr8	142784880	142786592	142784880	142786592	-	ENST00000301263.4@LY6D	ENST00000301263.4	protein_coding	142786465,142785589,142784880	142786592,142785687,142785456	Gene ID= ENSG00000167656.4 TPM= 1.06 Transcript Type= protein_coding
chr8	143018482	143022412	143018482	143022412	+	ENST00000292494.10@LY6E	ENST00000292494.10	protein_coding	143018482,143020883,143021314,143021566	143018586,143020991,143021433,143022412	Gene ID= ENSG00000160932.10 TPM= 35.58 Transcript Type= protein_coding
chr8	143018483	143022410	143018483	143022410	+	ENST00000429120.6@LY6E	ENST00000429120.6	protein_coding	143018483,143020888,143021314,143021566	143018586,143020991,143021433,143022410	Gene ID= ENSG00000160932.10 TPM= 13.28 Transcript Type= protein_coding
chr8	143213193	143217170	143213193	143217170	+	ENST00000622500.1@GPIHBP1	ENST00000622500.1	protein_coding	143213193,143213822,143215013,143215259	143213319,143213950,143215126,143217170	Gene ID= ENSG00000277494.1 TPM= 9.56 Transcript Type= protein_coding
chr8	143246928	143262705	143246928	143262705	+	ENST00000330701.5@ZFP41	ENST00000330701.5	protein_coding	143246928,143249690,143259775	143247142,143251340,143262705	Gene ID= ENSG00000181638.17 TPM= 4.25 Transcript Type= protein_coding
chr8	143266657	143268397	143266657	143268397	+	transcript3759.chr8.nnic@NA	transcript3759.chr8.nnic	NA	143266657	143268397	Gene ID= novel_gene_chr8_3760 TPM= 3.19 Transcript Type= NA
chr8	143274599	143276931	143274599	143276931	+	ENST00000523812.1@GLI4	ENST00000523812.1	protein_coding	143274599	143276931	Gene ID= ENSG00000250571.6 TPM= 10.62 Transcript Type= processed_transcript
chr8	143267437	143276929	143267437	143276929	+	ENST00000340042.1@GLI4	ENST00000340042.1	protein_coding	143267437,143269360,143274704,143275897	143267484,143269520,143274802,143276929	Gene ID= ENSG00000250571.6 TPM= 20.18 Transcript Type= protein_coding
chr8	143269358	143276931	143269358	143276931	+	ENST00000523522.5@GLI4	ENST00000523522.5	protein_coding	143269358,143274704,143275897	143269520,143274802,143276931	Gene ID= ENSG00000250571.6 TPM= 15.93 Transcript Type= protein_coding
chr8	143280828	143281690	143280828	143281690	-	ENST00000518073.1@MINCR	ENST00000518073.1	antisense_RNA	143281482,143280828	143281690,143280997	Gene ID= ENSG00000253716.5 TPM= 13.81 Transcript Type= antisense_RNA
chr8	143291389	143298061	143291389	143298061	+	ENST00000330143.7@ZNF696	ENST00000330143.7	protein_coding	143291389,143292972,143295740	143291767,143293065,143298061	Gene ID= ENSG00000185730.7 TPM= 7.44 Transcript Type= protein_coding
chr8	143296915	143299639	143296915	143299639	+	transcript3768.chr8.nnic@NA	transcript3768.chr8.nnic	NA	143296915	143299639	Gene ID= novel_gene_chr8_3769 TPM= 2.12 Transcript Type= NA
chr8	143309324	143334896	143309324	143334896	-	ENST00000329245.8@TOP1MT	ENST00000329245.8	protein_coding	143334740,143331224,143329350,143326222,143325346,143324485,143323999,143321201,143318018,143317723,143315999,143315727,143310068,143309324	143334896,143331339,143329471,143326344,143325533,143324629,143324142,143321386,143318086,143317837,143316126,143315821,143310217,143309543	Gene ID= ENSG00000184428.12 TPM= 5.31 Transcript Type= protein_coding
chr8	143437655	143541453	143437655	143541453	-	ENST00000262577.5@ZC3H3	ENST00000262577.5	protein_coding	143541376,143538003,143536257,143507746,143475398,143468617,143468382,143468209,143465717,143440936,143440041,143437655	143541453,143539320,143536453,143507899,143475585,143468659,143468540,143468278,143465848,143441120,143440363,143438087	Gene ID= ENSG00000014164.6 TPM= 24.43 Transcript Type= protein_coding
chr8	143541623	143542926	143541623	143542926	+	transcript3781.chr8.nnic@NA	transcript3781.chr8.nnic	NA	143541623	143542926	Gene ID= novel_gene_chr8_3782 TPM= 2.12 Transcript Type= NA
chr8	143553207	143563062	143553207	143563062	+	ENST00000526406.5@GSDMD	ENST00000526406.5	protein_coding	143553207,143555059,143555934,143558362,143559332,143559777,143560603,143561002,143561370,143561742,143561959,143562209,143562448,143562662	143553760,143555196,143556030,143558451,143559552,143559969,143560771,143561104,143561423,143561828,143562131,143562350,143562521,143563062	Gene ID= ENSG00000104518.10 TPM= 12.21 Transcript Type= protein_coding
chr8	143558307	143563062	143558307	143563062	+	ENST00000262580.8@GSDMD	ENST00000262580.8	protein_coding	143558307,143559332,143559777,143560603,143561002,143561370,143561742,143561959,143562209,143562448,143562662	143558451,143559552,143559969,143560771,143561104,143561423,143561828,143562131,143562350,143562521,143563062	Gene ID= ENSG00000104518.10 TPM= 18.59 Transcript Type= protein_coding
chr8	143556822	143558556	143556822	143558556	-	transcript3789.chr8.nnic@NA	transcript3789.chr8.nnic	NA	143556822	143558556	Gene ID= novel_gene_chr8_3790 TPM= 4.25 Transcript Type= NA
chr8	143574787	143578343	143574787	143578343	-	ENST00000426292.7@NAPRT	ENST00000426292.7	protein_coding	143578093,143577816,143577657,143577269,143577062,143576646,143576432,143576078,143575622,143575423,143575230,143574986,143574787	143578343,143577943,143577739,143577399,143577177,143576842,143576572,143576162,143575702,143575525,143575345,143575093,143574900	Gene ID= ENSG00000147813.15 TPM= 3.54 Transcript Type= protein_coding
chr8	143574785	143578346	143574785	143578346	-	transcript3801.chr8.nnic@NAPRT	transcript3801.chr8.nnic	protein_coding	143578093,143577816,143577657,143577269,143577062,143576646,143576432,143576078,143575622,143575423,143574785	143578346,143577943,143577739,143577399,143577177,143576842,143576572,143576162,143575702,143575525,143574900	Gene ID= ENSG00000147813.15 TPM= 3.19 Transcript Type= NA
chr8	143574785	143578613	143574785	143578613	-	ENST00000449291.6@NAPRT	ENST00000449291.6	protein_coding	143578093,143577816,143577657,143577269,143577062,143576646,143576432,143576078,143575622,143575423,143575191,143574986,143574785	143578613,143577943,143577739,143577399,143577177,143576842,143576572,143576162,143575702,143575525,143575345,143575093,143574900	Gene ID= ENSG00000147813.15 TPM= 69.39 Transcript Type= protein_coding
chr8	143574785	143578343	143574785	143578343	-	ENST00000435154.7@NAPRT	ENST00000435154.7	protein_coding	143578093,143577816,143577657,143577269,143577062,143576646,143576432,143576078,143575622,143575423,143574785	143578343,143577943,143577739,143577399,143577177,143576842,143576572,143576162,143575702,143575525,143575345	Gene ID= ENSG00000147813.15 TPM= 6.64 Transcript Type= protein_coding
chr8	143574787	143578339	143574787	143578339	-	ENST00000340490.7@NAPRT	ENST00000340490.7	protein_coding	143578093,143577816,143577657,143577269,143577062,143576646,143576432,143576078,143575622,143575423,143575191,143574787	143578339,143577943,143577739,143577399,143577177,143576842,143576572,143576162,143575702,143575525,143575345,143575093	Gene ID= ENSG00000147813.15 TPM= 3.45 Transcript Type= non_stop_decay
chr8	143579697	143597675	143579697	143597675	-	ENST00000423316.6@EEF1D	ENST00000423316.6	protein_coding	143597348,143588991,143586729,143586219,143581229,143581054,143580506,143580012,143579697	143597675,143590092,143586852,143586290,143581328,143581154,143580727,143580206,143579830	Gene ID= ENSG00000104529.17 TPM= 48.12 Transcript Type= protein_coding
chr8	143579697	143597675	143579697	143597675	-	ENST00000419152.6@EEF1D	ENST00000419152.6	protein_coding	143597348,143593893,143586729,143586219,143581229,143581054,143580506,143580012,143579697	143597675,143594071,143586849,143586290,143581328,143581154,143580727,143580206,143579830	Gene ID= ENSG00000104529.17 TPM= 35.9 Transcript Type= protein_coding
chr8	143579728	143597425	143579728	143597425	-	ENST00000528610.5@EEF1D	ENST00000528610.5	protein_coding	143597348,143586729,143581229,143581054,143580506,143580012,143579728	143597425,143586852,143581328,143581154,143580727,143580206,143579830	Gene ID= ENSG00000104529.17 TPM= 68.65 Transcript Type= protein_coding
chr8	143579728	143597415	143579728	143597415	-	ENST00000442189.6@EEF1D	ENST00000442189.6	protein_coding	143597348,143590608,143588991,143586729,143586219,143581229,143581054,143580506,143580012,143579728	143597415,143590738,143590081,143586852,143586290,143581328,143581154,143580727,143580206,143579830	Gene ID= ENSG00000104529.17 TPM= 54.49 Transcript Type= protein_coding
chr8	143579729	143597387	143579729	143597387	-	ENST00000529007.5@EEF1D	ENST00000529007.5	protein_coding	143597348,143586729,143586219,143581229,143581054,143580506,143580012,143579729	143597387,143586852,143586290,143581328,143581154,143580632,143580206,143579830	Gene ID= ENSG00000104529.17 TPM= 17.88 Transcript Type= nonsense_mediated_decay
chr8	143582388	143584413	143582388	143584413	+	transcript3852.chr8.nnic@NA	transcript3852.chr8.nnic	NA	143582388	143584413	Gene ID= novel_gene_chr8_3853 TPM= 36.11 Transcript Type= NA
chr8	143597847	143600314	143597847	143600314	+	transcript3850.chr8.nnic@NA	transcript3850.chr8.nnic	NA	143597847	143600314	Gene ID= novel_gene_chr8_3851 TPM= 32.93 Transcript Type= NA
chr8	143603913	143609614	143603913	143609614	-	ENST00000220966.10@PYCR3	ENST00000220966.10	protein_coding	143609458,143608062,143606953,143606467,143606062,143603913	143609614,143608126,143607132,143606679,143606154,143605882	Gene ID= ENSG00000104524.13 TPM= 1.06 Transcript Type= protein_coding
chr8	143604219	143609574	143604219	143609574	-	ENST00000495276.5@PYCR3	ENST00000495276.5	protein_coding	143609458,143608062,143606953,143606467,143606062,143604219	143609574,143608126,143607132,143606679,143606154,143605882	Gene ID= ENSG00000104524.13 TPM= 14.87 Transcript Type= protein_coding
chr8	143612618	143618303	143612618	143618303	-	transcript3866.chr8.nic@TSTA3	transcript3866.chr8.nic	protein_coding	143617474,143616567,143616106,143614787,143614320,143614164,143613751,143613524,143613196,143612618	143618303,143616723,143616220,143614915,143614697,143614228,143613817,143613603,143613295,143612965	Gene ID= ENSG00000104522.15 TPM= 15.4 Transcript Type= NA
chr8	143612618	143617507	143612618	143617507	-	transcript3873.chr8.nic@TSTA3	transcript3873.chr8.nic	protein_coding	143617474,143614164,143613524,143612618	143617507,143616723,143613817,143613295	Gene ID= ENSG00000104522.15 TPM= 2.12 Transcript Type= NA
chr8	143612618	143617566	143612618	143617566	-	ENST00000425753.6@TSTA3	ENST00000425753.6	protein_coding	143617474,143616567,143616106,143614787,143614624,143614320,143614164,143613751,143613524,143613196,143612618	143617566,143616723,143616220,143614915,143614697,143614453,143614228,143613817,143613603,143613295,143612965	Gene ID= ENSG00000104522.15 TPM= 38.77 Transcript Type= protein_coding
chr8	143636013	143652376	143636013	143652376	+	ENST00000526926.5@ZNF623	ENST00000526926.5	protein_coding	143636013,143649898	143636145,143652376	Gene ID= ENSG00000183309.11 TPM= 11.68 Transcript Type= protein_coding
chr8	143790925	143815756	143790925	143815756	-	transcript3879.chr8.nnic@SCRIB	transcript3879.chr8.nnic	protein_coding	143815214,143814001,143813818,143813637,143813470,143813311,143813030,143812817,143812266,143811146,143810906,143810686,143810479,143809551,143808609,143807552,143806924,143806407,143805112,143804934,143804046,143803647,143803383,143795420,143795277,143795038,143793900,143792976,143792708,143792485,143792220,143791991,143791876,143791666,143791389,143790925	143815756,143814118,143813896,143813726,143813526,143813374,143813104,143812961,143812384,143811345,143811072,143810816,143810604,143809718,143809025,143807614,143807013,143806484,143805435,143805014,143804156,143803940,143803571,143795530,143795333,143795112,143793962,143793083,143792867,143792635,143792405,143792133,143791913,143791740,143791440,143791308	Gene ID= ENSG00000180900.18 TPM= 9.56 Transcript Type= NA
chr8	143790925	143815756	143790925	143815756	-	transcript3883.chr8.nnic@SCRIB	transcript3883.chr8.nnic	protein_coding	143815214,143814001,143813818,143813637,143813470,143813311,143813030,143812817,143812266,143811146,143810906,143810686,143810479,143809551,143808609,143807552,143806924,143806407,143805112,143804934,143804046,143803647,143803383,143795420,143795277,143795038,143793900,143792976,143792708,143792485,143792220,143791991,143791876,143791389,143790925	143815756,143814118,143813896,143813726,143813526,143813374,143813104,143812961,143812384,143811345,143811072,143810816,143810604,143809718,143809025,143807614,143807013,143806484,143805435,143805014,143804156,143803940,143803571,143795530,143795333,143795112,143793962,143793083,143792867,143792635,143792405,143792133,143791913,143791440,143791308	Gene ID= ENSG00000180900.18 TPM= 26.55 Transcript Type= NA
chr8	143790925	143815756	143790925	143815756	-	transcript3886.chr8.nnic@SCRIB	transcript3886.chr8.nnic	protein_coding	143815214,143814001,143813818,143813637,143813470,143813311,143813030,143812817,143812266,143811146,143810906,143810686,143810479,143809551,143808609,143807552,143806924,143806407,143805112,143804934,143804046,143803647,143803383,143795420,143795277,143795038,143793900,143792976,143792708,143792485,143792220,143791991,143791389,143790925	143815756,143814118,143813896,143813726,143813526,143813374,143813104,143812961,143812384,143811345,143811072,143810816,143810604,143809718,143809025,143807614,143807013,143806484,143805435,143805014,143804156,143803940,143803571,143795530,143795333,143795112,143793962,143793083,143792867,143792635,143792405,143792133,143791440,143791308	Gene ID= ENSG00000180900.18 TPM= 16.99 Transcript Type= NA
chr8	143816344	143829859	143816344	143829859	-	ENST00000526683.5@PUF60	ENST00000526683.5	protein_coding	143829280,143824313,143821818,143821597,143820666,143818373,143818193,143817862,143817592,143817331,143816910,143816344	143829859,143824399,143821913,143821686,143820716,143818534,143818285,143818075,143817782,143817466,143817145,143816819	Gene ID= ENSG00000179950.13 TPM= 109.37 Transcript Type= protein_coding
chr8	143816377	143829039	143816377	143829039	-	ENST00000313352.11@PUF60	ENST00000313352.11	protein_coding	143828984,143824313,143821818,143821597,143818373,143818193,143817862,143817592,143817331,143816910,143816377	143829039,143824399,143821913,143821686,143818534,143818285,143818075,143817782,143817466,143817145,143816819	Gene ID= ENSG00000179950.13 TPM= 19.7 Transcript Type= protein_coding
chr8	143816377	143829352	143816377	143829352	-	ENST00000349157.10@PUF60	ENST00000349157.10	protein_coding	143829280,143824313,143821818,143821597,143818373,143818193,143817862,143817592,143817331,143816910,143816377	143829352,143824399,143821913,143821686,143818534,143818285,143818075,143817782,143817466,143817145,143816819	Gene ID= ENSG00000179950.13 TPM= 84.49 Transcript Type= protein_coding
chr8	143816377	143829303	143816377	143829303	-	ENST00000456095.6@PUF60	ENST00000456095.6	protein_coding	143829280,143821818,143821597,143820666,143818373,143818193,143817862,143817592,143817331,143816910,143816377	143829303,143821913,143821686,143820716,143818534,143818285,143818075,143817782,143817466,143817145,143816819	Gene ID= ENSG00000179950.13 TPM= 26.79 Transcript Type= protein_coding
chr8	143833724	143841117	143833724	143841117	-	transcript3913.chr8.nic@NRBP2	transcript3913.chr8.nic	protein_coding	143840706,143840107,143839929,143839736,143839509,143839314,143839172,143839017,143838883,143838680,143837623,143837407,143837249,143837039,143836127,143835967,143833724	143841117,143840229,143840030,143839825,143839549,143839408,143839195,143839100,143838938,143838775,143837755,143837509,143837299,143837174,143836180,143836030,143835730	Gene ID= ENSG00000185189.17 TPM= 10.09 Transcript Type= NA
chr8	143833746	143841180	143833746	143841180	-	transcript3914.chr8.nic@NRBP2	transcript3914.chr8.nic	protein_coding	143840706,143840107,143839929,143839736,143839509,143839314,143839172,143839017,143838883,143838680,143837623,143837407,143837249,143837039,143836127,143835967,143833746	143841180,143840229,143840030,143839825,143839549,143839408,143839195,143839100,143838938,143838775,143837755,143837509,143837299,143837174,143836180,143836030,143835875	Gene ID= ENSG00000185189.17 TPM= 3.72 Transcript Type= NA
chr8	143833746	143841242	143833746	143841242	-	transcript3918.chr8.nic@NRBP2	transcript3918.chr8.nic	protein_coding	143840706,143840107,143839929,143839509,143839314,143839172,143839017,143838883,143838680,143837623,143837407,143837249,143837039,143836127,143835967,143833746	143841242,143840229,143840030,143839825,143839408,143839195,143839100,143838938,143838775,143837755,143837509,143837299,143837174,143836180,143836030,143835875	Gene ID= ENSG00000185189.17 TPM= 3.72 Transcript Type= NA
chr8	143833721	143840974	143833721	143840974	-	ENST00000442628.6@NRBP2	ENST00000442628.6	protein_coding	143840706,143840107,143839929,143839736,143839509,143839314,143839172,143839017,143838883,143838680,143837623,143837407,143837249,143837039,143836127,143835967,143835820,143833721	143840974,143840229,143840030,143839825,143839549,143839408,143839195,143839100,143838938,143838775,143837755,143837509,143837299,143837174,143836180,143836030,143835875,143835730	Gene ID= ENSG00000185189.17 TPM= 14.34 Transcript Type= protein_coding
chr8	143977160	143986454	143977160	143986454	-	ENST00000313028.11@PARP10	ENST00000313028.11	protein_coding	143986358,143986055,143985721,143985412,143984544,143984210,143984008,143983167,143982932,143977907,143977160	143986454,143986233,143985975,143985648,143985328,143984431,143984104,143983811,143983065,143978081,143977830	Gene ID= ENSG00000178685.13 TPM= 13.28 Transcript Type= protein_coding
chr8	143977160	143984599	143977160	143984599	-	transcript3940.chr8.nic@PARP10	transcript3940.chr8.nic	protein_coding	143984210,143983167,143982932,143977907,143977160	143984599,143984104,143983065,143978081,143977830	Gene ID= ENSG00000178685.13 TPM= 6.9 Transcript Type= NA
chr8	143990058	143993415	143990058	143993415	+	ENST00000313269.5@GRINA	ENST00000313269.5	protein_coding	143990058,143991200,143991692,143991878,143992245,143992465,143992692	143990311,143991602,143991804,143992078,143992373,143992608,143993415	Gene ID= ENSG00000178719.16 TPM= 24.43 Transcript Type= protein_coding
chr8	143990100	143993415	143990100	143993415	+	ENST00000395068.8@GRINA	ENST00000395068.8	protein_coding	143990100,143991200,143991692,143991878,143992245,143992465,143992692	143990199,143991602,143991804,143992078,143992373,143992608,143993415	Gene ID= ENSG00000178719.16 TPM= 25.49 Transcript Type= protein_coding
chr8	144051266	144063441	144051266	144063441	-	transcript3951.chr8.nnic@OPLAH	transcript3951.chr8.nnic	protein_coding	144063335,144059862,144059599,144058980,144058773,144058496,144058239,144058010,144057856,144057448,144057208,144056948,144056618,144056385,144056147,144055788,144055029,144054812,144054561,144053209,144052983,144052766,144052449,144052169,144051916,144051729,144051266	144063441,144060085,144059790,144059079,144058896,144058691,144058404,144058148,144057923,144057713,144057320,144057118,144056755,144056523,144056259,144055939,144055189,144054913,144054735,144053393,144053129,144052900,144052598,144052326,144052076,144051826,144051472	Gene ID= ENSG00000178814.16 TPM= 2.12 Transcript Type= NA
chr8	144051266	144063532	144051266	144063532	-	transcript3952.chr8.nnic@OPLAH	transcript3952.chr8.nnic	protein_coding	144063472,144059862,144059599,144058980,144058773,144058496,144058239,144058010,144057856,144057448,144057208,144056948,144056618,144056385,144056147,144055788,144055029,144054812,144054561,144053209,144052983,144052766,144052449,144052169,144051916,144051729,144051266	144063532,144060085,144059790,144059079,144058896,144058691,144058404,144058148,144057923,144057713,144057320,144057118,144056755,144056523,144056259,144055939,144055189,144054913,144054735,144053393,144053129,144052900,144052598,144052326,144052076,144051826,144051472	Gene ID= ENSG00000178814.16 TPM= 2.12 Transcript Type= NA
chr8	144051266	144063436	144051266	144063436	-	transcript3954.chr8.nnic@OPLAH	transcript3954.chr8.nnic	protein_coding	144063304,144059862,144059599,144058980,144058773,144058496,144058239,144058010,144057856,144057448,144057208,144056948,144056618,144056385,144056147,144055788,144055029,144054812,144054561,144053209,144052983,144052766,144052449,144052169,144051916,144051729,144051266	144063436,144060164,144059790,144059079,144058896,144058691,144058404,144058148,144057923,144057713,144057320,144057118,144056755,144056523,144056259,144055939,144055189,144054913,144054735,144053393,144053129,144052900,144052598,144052326,144052076,144051826,144051472	Gene ID= ENSG00000178814.16 TPM= 2.12 Transcript Type= NA
chr8	144051266	144060703	144051266	144060703	-	ENST00000618853.4@OPLAH	ENST00000618853.4	protein_coding	144060653,144059862,144059599,144058980,144058773,144058496,144058239,144058010,144057856,144057448,144057208,144056948,144056618,144056385,144056147,144055788,144055029,144054812,144054561,144053209,144052983,144052766,144052449,144052169,144051916,144051729,144051266	144060703,144060085,144059790,144059079,144058896,144058691,144058404,144058148,144057923,144057713,144057320,144057118,144056755,144056523,144056259,144055939,144055189,144054913,144054735,144053393,144053129,144052900,144052598,144052326,144052076,144051826,144051472	Gene ID= ENSG00000178814.16 TPM= 66.92 Transcript Type= protein_coding
chr8	144060098	144061533	144060098	144061533	+	transcript3958.chr8.nnic@NA	transcript3958.chr8.nnic	NA	144060098	144061533	Gene ID= novel_gene_chr8_3959 TPM= 10.62 Transcript Type= NA
chr8	144078002	144079265	144078002	144079265	-	ENST00000524499.1@AC109322.1	ENST00000524499.1	antisense_RNA	144078002	144079265	Gene ID= ENSG00000255224.1 TPM= 5.31 Transcript Type= antisense_RNA
chr8	144078626	144080647	144078626	144080647	+	ENST00000316052.5@EXOSC4	ENST00000316052.5	protein_coding	144078626,144079943,144080242	144078899,144080149,144080647	Gene ID= ENSG00000178896.8 TPM= 35.05 Transcript Type= protein_coding
chr8	144082594	144086216	144082594	144086216	+	transcript3969.chr8.nic@GPAA1	transcript3969.chr8.nic	protein_coding	144082594,144083124,144083389,144083939,144084134,144084413,144084722,144085043,144085289,144085573,144085882	144082804,144083303,144083861,144084040,144084330,144084609,144084875,144085138,144085479,144085743,144086216	Gene ID= ENSG00000197858.10 TPM= 14.42 Transcript Type= NA
chr8	144082610	144086216	144082610	144086216	+	ENST00000355091.8@GPAA1	ENST00000355091.8	protein_coding	144082610,144083124,144083389,144083714,144083939,144084134,144084413,144084722,144085043,144085289,144085573,144085882	144082804,144083303,144083500,144083861,144084040,144084330,144084609,144084875,144085138,144085479,144085743,144086216	Gene ID= ENSG00000197858.10 TPM= 230.04 Transcript Type= protein_coding
chr8	144095027	144097525	144095027	144097525	+	ENST00000318911.4@CYC1	ENST00000318911.4	protein_coding	144095027,144095833,144096124,144096337,144096584,144097034,144097232	144095228,144096029,144096250,144096494,144096744,144097134,144097525	Gene ID= ENSG00000179091.4 TPM= 1631.66 Transcript Type= protein_coding
chr8	144095039	144097525	144095039	144097525	+	ENST00000533444.1@CYC1	ENST00000533444.1	protein_coding	144095039,144096124,144096337,144096584,144097034,144097232	144096029,144096250,144096494,144096744,144097134,144097525	Gene ID= ENSG00000179091.4 TPM= 53.29 Transcript Type= retained_intron
chr8	144098637	144104217	144098637	144104217	-	transcript3993.chr8.nic@SHARPIN	transcript3993.chr8.nic	protein_coding	144103553,144103051,144099929,144099703,144099510,144099081,144098866,144098637	144104217,144103225,144100069,144099844,144099618,144099430,144098994,144098788	Gene ID= ENSG00000179526.16 TPM= 7.97 Transcript Type= NA
chr8	144098637	144104885	144098637	144104885	-	transcript4009.chr8.nic@SHARPIN	transcript4009.chr8.nic	protein_coding	144103553,144103051,144099929,144099703,144099510,144099277,144098637	144104885,144103225,144100069,144099844,144099618,144099430,144098994	Gene ID= ENSG00000179526.16 TPM= 5.13 Transcript Type= NA
chr8	144098637	144104190	144098637	144104190	-	ENST00000398712.6@SHARPIN	ENST00000398712.6	protein_coding	144103553,144103051,144099929,144099703,144099510,144099277,144099081,144098866,144098637	144104190,144103225,144100069,144099844,144099618,144099430,144099205,144098994,144098788	Gene ID= ENSG00000179526.16 TPM= 106.4 Transcript Type= protein_coding
chr8	144098637	144104237	144098637	144104237	-	ENST00000359551.6@SHARPIN	ENST00000359551.6	protein_coding	144103553,144103051,144099929,144099703,144099510,144099277,144098866,144098637	144104237,144103225,144100069,144099844,144099618,144099430,144098994,144098788	Gene ID= ENSG00000179526.16 TPM= 22.49 Transcript Type= nonsense_mediated_decay
chr8	144103862	144107611	144103862	144107611	+	transcript4005.chr8.nic@MAF1	transcript4005.chr8.nic	protein_coding	144103862,144105640,144105869,144106076,144106343,144106555,144106835	144104858,144105766,144105997,144106241,144106464,144106674,144107611	Gene ID= ENSG00000179632.9 TPM= 18.27 Transcript Type= NA
chr8	144104499	144107611	144104499	144107611	+	ENST00000322428.9@MAF1	ENST00000322428.9	protein_coding	144104499,144105640,144105869,144106076,144106343,144106555,144106835,144107088	144104858,144105766,144105997,144106241,144106464,144106674,144106963,144107611	Gene ID= ENSG00000179632.9 TPM= 528.82 Transcript Type= protein_coding
chr8	144104512	144107611	144104512	144107611	+	ENST00000534585.5@MAF1	ENST00000534585.5	protein_coding	144104512,144105640,144105869,144106076,144106343,144106835,144107088	144104858,144105766,144105997,144106241,144106674,144106963,144107611	Gene ID= ENSG00000179632.9 TPM= 28.54 Transcript Type= protein_coding
chr8	144109699	144116390	144109699	144116390	+	ENST00000525150.5@WDR97	ENST00000525150.5	protein_coding	144109699,144110114,144110864,144111101,144111887,144112447,144113440,144113977,144114749,144115341,144115943,144116091	144110034,144110739,144110996,144111781,144112144,144112530,144113881,144114675,144114911,144115858,144116013,144116390	Gene ID= ENSG00000179698.13 TPM= 2.12 Transcript Type= retained_intron
chr8	144137755	144140713	144137755	144140713	+	transcript4059.chr8.nic@HGH1	transcript4059.chr8.nic	protein_coding	144137755,144138507,144138715,144139189,144139388	144138428,144138607,144139100,144139311,144140713	Gene ID= ENSG00000235173.6 TPM= 4.78 Transcript Type= NA
chr8	144137769	144140843	144137769	144140843	+	ENST00000347708.4@HGH1	ENST00000347708.4	protein_coding	144137769,144138507,144138715,144139009,144139189,144139388	144138428,144138607,144138813,144139100,144139311,144140843	Gene ID= ENSG00000235173.6 TPM= 10.09 Transcript Type= protein_coding
chr8	144143910	144146623	144143910	144146623	+	transcript4068.chr8.nnic@NA	transcript4068.chr8.nnic	NA	144143910	144146623	Gene ID= novel_gene_chr8_4069 TPM= 2.12 Transcript Type= NA
chr8	144148012	144261927	144148012	144261927	+	transcript4031.chr8.nic@MROH1	transcript4031.chr8.nic	protein_coding	144148012,144160970,144163771,144168295,144179455,144180178,144180425,144190784,144191715,144192309,144199122,144200428,144220600,144223108,144238756,144239035,144239323,144239614,144240101,144240570,144240992,144241395,144242369,144242602,144243494,144243863,144244222,144244444,144245156,144247301,144247567,144248877,144250212,144254813,144255509,144258777,144259240,144259911,144260186,144260677,144260907,144261114,144261284,144261655	144148076,144161089,144163848,144168440,144179586,144180340,144180523,144190935,144191855,144192401,144199200,144200541,144220673,144223230,144238863,144239179,144239363,144239755,144240153,144240677,144241111,144241517,144242515,144242628,144243616,144243942,144244336,144244539,144245260,144247436,144247679,144249029,144250366,144254978,144255705,144258914,144259354,144260057,144260374,144260832,144261041,144261216,144261349,144261927	Gene ID= ENSG00000179832.17 TPM= 17.53 Transcript Type= NA
chr8	144253466	144261927	144253466	144261927	+	transcript4052.chr8.nic@MROH1	transcript4052.chr8.nic	protein_coding	144253466,144255509,144258777,144259240,144259911,144260186,144260677,144260907,144261114,144261284,144261655	144254978,144255705,144258914,144259354,144260057,144260374,144260832,144261041,144261216,144261349,144261927	Gene ID= ENSG00000179832.17 TPM= 5.84 Transcript Type= NA
chr8	144197997	144199104	144197997	144199104	-	transcript4070.chr8.nnic@NA	transcript4070.chr8.nnic	NA	144197997	144199104	Gene ID= novel_gene_chr8_4071 TPM= 2.12 Transcript Type= NA
chr8	144262102	144291405	144262102	144291405	-	transcript4037.chr8.nic@BOP1	transcript4037.chr8.nic	protein_coding	144291272,144289095,144276224,144264714,144264515,144264225,144263981,144263831,144263692,144263478,144263221,144262853,144262588,144262396,144262102	144291405,144289304,144276304,144265071,144264616,144264437,144264142,144263911,144263761,144263610,144263401,144263141,144262672,144262503,144262317	Gene ID= ENSG00000261236.7 TPM= 2.12 Transcript Type= NA
chr8	144262102	144291457	144262102	144291457	-	transcript4040.chr8.nic@BOP1	transcript4040.chr8.nic	protein_coding	144291272,144289095,144276224,144264917,144264714,144264515,144264225,144263981,144263831,144263692,144263221,144262853,144262588,144262396,144262102	144291457,144289304,144276304,144265071,144264831,144264616,144264437,144264142,144263911,144263761,144263610,144263141,144262672,144262503,144262317	Gene ID= ENSG00000261236.7 TPM= 2.12 Transcript Type= NA
chr8	144262102	144291370	144262102	144291370	-	ENST00000569669.5@BOP1	ENST00000569669.5	protein_coding	144291272,144289095,144276224,144264917,144264714,144264515,144264225,144263981,144263831,144263692,144263478,144263221,144262853,144262588,144262396,144262102	144291370,144289304,144276304,144265071,144264831,144264616,144264437,144264142,144263911,144263761,144263610,144263401,144263141,144262672,144262503,144262317	Gene ID= ENSG00000261236.7 TPM= 71.16 Transcript Type= protein_coding
chr8	144291585	144314716	144291585	144314716	+	transcript4080.chr8.nic@HSF1	transcript4080.chr8.nic	protein_coding	144291585,144308906,144309455,144309772,144311174,144311321,144311505,144311700,144311963,144312628,144313511,144313846,144313985,144314125	144291874,144309014,144309591,144309896,144311249,144311382,144311601,144311836,144312244,144312711,144313616,144313911,144314054,144314716	Gene ID= ENSG00000185122.10 TPM= 29.9 Transcript Type= NA
chr8	144291566	144314716	144291566	144314716	+	transcript4090.chr8.nic@HSF1	transcript4090.chr8.nic	protein_coding	144291566,144308906,144309455,144309772,144311174,144311321,144311505,144311700,144311963,144313511,144313846,144314125	144291874,144309014,144309591,144309896,144311249,144311382,144311601,144311836,144312244,144313616,144314054,144314716	Gene ID= ENSG00000185122.10 TPM= 71.06 Transcript Type= NA
chr8	144291598	144314722	144291598	144314722	+	ENST00000528838.5@HSF1	ENST00000528838.5	protein_coding	144291598,144308906,144309455,144309772,144311174,144311321,144311505,144311700,144311963,144313511,144313846,144313985,144314125	144291874,144309014,144309591,144309896,144311249,144311382,144311601,144311836,144312244,144313616,144313911,144314054,144314722	Gene ID= ENSG00000185122.10 TPM= 285.53 Transcript Type= protein_coding
chr8	144295715	144296911	144295715	144296911	-	transcript4101.chr8.nnic@NA	transcript4101.chr8.nnic	NA	144295715	144296911	Gene ID= novel_gene_chr8_4102 TPM= 5.31 Transcript Type= NA
chr8	144316287	144326917	144316287	144326917	-	transcript4077.chr8.nnic@DGAT1	transcript4077.chr8.nnic	protein_coding	144326437,144321321,144319028,144318835,144318699,144318461,144318261,144318095,144317914,144317784,144317671,144317544,144317333,144317187,144317022,144316287	144326917,144321408,144319068,144318920,144318751,144318566,144318362,144318169,144318017,144317822,144317712,144317588,144317445,144317252,144317109,144316673	Gene ID= ENSG00000185000.11 TPM= 5.31 Transcript Type= NA
chr8	144316320	144326917	144316320	144326917	-	transcript4079.chr8.nic@DGAT1	transcript4079.chr8.nic	protein_coding	144326437,144321321,144319028,144318835,144318699,144318461,144318095,144317914,144317784,144317671,144317544,144317333,144317022,144316853,144316320	144326917,144321408,144319068,144318920,144318751,144318566,144318362,144318017,144317822,144317712,144317588,144317445,144317252,144316915,144316709	Gene ID= ENSG00000185000.11 TPM= 3.19 Transcript Type= NA
chr8	144314584	144326910	144314584	144326910	-	ENST00000528718.5@DGAT1	ENST00000528718.5	protein_coding	144326437,144321321,144319028,144318835,144318699,144318461,144318261,144318095,144317914,144317784,144317671,144317544,144317333,144317187,144317022,144316853,144314584	144326910,144321408,144319068,144318920,144318751,144318566,144318362,144318169,144318017,144317822,144317712,144317588,144317445,144317252,144317109,144316915,144316709	Gene ID= ENSG00000185000.11 TPM= 6.37 Transcript Type= protein_coding
chr8	144355431	144358533	144355431	144358533	-	transcript4108.chr8.nnic@FBXL6	transcript4108.chr8.nnic	protein_coding	144357628,144356990,144356808,144356600,144356300,144355968,144355431	144358533,144357121,144356915,144356713,144356531,144356214,144355678	Gene ID= ENSG00000182325.10 TPM= 4.64 Transcript Type= NA
chr8	144355431	144359376	144355431	144359376	-	ENST00000530142.5@FBXL6	ENST00000530142.5	protein_coding	144359333,144357628,144356990,144356808,144356600,144356300,144355968,144355431	144359376,144359229,144357502,144356915,144356713,144356531,144356214,144355678	Gene ID= ENSG00000182325.10 TPM= 1.24 Transcript Type= retained_intron
chr8	144355431	144358547	144355431	144358547	-	transcript4110.chr8.nic@FBXL6	transcript4110.chr8.nic	protein_coding	144356990,144356808,144356600,144356300,144355968,144355431	144358547,144356915,144356713,144356531,144356214,144355678	Gene ID= ENSG00000182325.10 TPM= 8.89 Transcript Type= NA
chr8	144355431	144358472	144355431	144358472	-	transcript4114.chr8.nic@FBXL6	transcript4114.chr8.nic	protein_coding	144356990,144356808,144356300,144355968,144355431	144358472,144356915,144356713,144356214,144355678	Gene ID= ENSG00000182325.10 TPM= 2.52 Transcript Type= NA
chr8	144355431	144358482	144355431	144358482	-	transcript4116.chr8.nic@FBXL6	transcript4116.chr8.nic	protein_coding	144356808,144356300,144355968,144355431	144358482,144356713,144356214,144355678	Gene ID= ENSG00000182325.10 TPM= 2.52 Transcript Type= NA
chr8	144355431	144358512	144355431	144358512	-	ENST00000331890.5@FBXL6	ENST00000331890.5	protein_coding	144358032,144357628,144357439,144356990,144356808,144356600,144356300,144355968,144355431	144358512,144357786,144357502,144357121,144356915,144356713,144356531,144356214,144355678	Gene ID= ENSG00000182325.10 TPM= 8.89 Transcript Type= protein_coding
chr8	144358593	144361241	144358593	144361241	+	ENST00000532887.5@SLC52A2	ENST00000532887.5	protein_coding	144358593,144359184,144359623,144360590,144360803	144359065,144359423,144360493,144360713,144361241	Gene ID= ENSG00000185803.8 TPM= 41.42 Transcript Type= protein_coding
chr8	144358593	144361272	144358593	144361272	+	ENST00000329994.6@SLC52A2	ENST00000329994.6	protein_coding	144358593,144359184,144359623,144360590,144360803	144358783,144359423,144360493,144360713,144361272	Gene ID= ENSG00000185803.8 TPM= 13.81 Transcript Type= protein_coding
chr8	144374052	144393236	144374052	144393236	+	ENST00000308860.10@ADCK5	ENST00000308860.10	protein_coding	144374052,144379387,144383081,144390671,144390856,144391134,144391361,144391580,144391783,144391941,144392092,144392254,144392445,144392776,144392969	144374107,144379490,144383230,144390746,144391056,144391274,144391474,144391711,144391866,144392022,144392170,144392345,144392697,144392892,144393236	Gene ID= ENSG00000173137.11 TPM= 10.62 Transcript Type= protein_coding
chr8	144374046	144393242	144374046	144393242	+	ENST00000529654.5@ADCK5	ENST00000529654.5	protein_coding	144374046,144379387,144383081,144390671,144390861,144391134,144391361,144391580,144391941,144392092,144392254,144392445,144392776,144392969	144374107,144379490,144383230,144390746,144391056,144391274,144391474,144391866,144392022,144392170,144392345,144392697,144392892,144393242	Gene ID= ENSG00000173137.11 TPM= 2.12 Transcript Type= nonsense_mediated_decay
chr8	144393231	144409349	144393231	144409349	-	ENST00000616140.1@CPSF1	ENST00000616140.1	protein_coding	144409289,144409015,144401646,144401430,144401211,144400924,144400671,144400354,144400166,144399992,144399781,144399588,144399452,144399276,144399128,144398958,144398779,144398525,144398302,144397954,144397743,144397487,144397207,144396840,144396598,144396348,144395435,144395265,144395098,144394882,144394644,144394379,144394234,144394113,144393883,144393667,144393452,144393231	144409349,144409172,144401673,144401563,144401291,144401075,144400817,144400493,144400276,144400085,144399868,144399710,144399503,144399373,144399202,144399038,144398868,144398638,144398443,144398132,144397879,144397661,144397413,144396929,144396741,144396500,144395551,144395355,144395182,144395023,144394796,144394555,144394300,144394160,144394038,144393796,144393590,144393365	Gene ID= ENSG00000071894.16 TPM= 21.24 Transcript Type= protein_coding
chr8	144412414	144413586	144412414	144413586	-	ENST00000532718.5@SLC39A4	ENST00000532718.5	protein_coding	144413513,144413237,144412759,144412414	144413586,144413389,144412946,144412666	Gene ID= ENSG00000147804.9 TPM= 5.31 Transcript Type= processed_transcript
chr8	144423601	144428563	144423601	144428563	-	ENST00000292510.5@VPS28	ENST00000292510.5	protein_coding	144428489,144426909,144426180,144426026,144425683,144424946,144424718,144424215,144424041,144423601	144428563,144426979,144426208,144426063,144425772,144425051,144424819,144424268,144424132,144423922	Gene ID= ENSG00000160948.13 TPM= 140.48 Transcript Type= protein_coding
chr8	144423617	144428525	144423617	144428525	-	transcript4156.chr8.nic@VPS28	transcript4156.chr8.nic	protein_coding	144428489,144426909,144426180,144426026,144424946,144424718,144424215,144424041,144423617	144428525,144426979,144426208,144426063,144425772,144424819,144424268,144424132,144423922	Gene ID= ENSG00000160948.13 TPM= 10.16 Transcript Type= NA
chr8	144423621	144428576	144423621	144428576	-	transcript4171.chr8.nic@VPS28	transcript4171.chr8.nic	protein_coding	144428489,144426909,144426180,144426026,144425683,144424946,144423621	144428576,144426979,144426208,144426063,144425772,144425051,144424819	Gene ID= ENSG00000160948.13 TPM= 6.37 Transcript Type= NA
chr8	144423617	144426983	144423617	144426983	-	ENST00000526054.5@VPS28	ENST00000526054.5	protein_coding	144426909,144426180,144426026,144425683,144424946,144424718,144424215,144424041,144423617	144426983,144426208,144426063,144425772,144425051,144424819,144424268,144424132,144423922	Gene ID= ENSG00000160948.13 TPM= 18.33 Transcript Type= protein_coding
chr8	144428808	144444444	144428808	144444444	-	ENST00000409379.7@TONSL	ENST00000409379.7	protein_coding	144444390,144444180,144443882,144443138,144442677,144442241,144442037,144440966,144440718,144440351,144440021,144438653,144438471,144437027,144436757,144436558,144435658,144435474,144435017,144434811,144433978,144433588,144432285,144431078,144430404,144428808	144444444,144444275,144444024,144443321,144442806,144442412,144442151,144441111,144440870,144440476,144440210,144438735,144438560,144437099,144436920,144436681,144436418,144435550,144435170,144434889,144434279,144433759,144432460,144431151,144430537,144429336	Gene ID= ENSG00000160949.16 TPM= 3.19 Transcript Type= protein_coding
chr8	144449931	144465700	144449931	144465700	-	transcript4182.chr8.nic@CYHR1	transcript4182.chr8.nic	protein_coding	144465208,144464809,144453222,144452359,144449931	144465700,144465096,144453460,144452570,144450770	Gene ID= ENSG00000187954.12 TPM= 2.66 Transcript Type= NA
chr8	144451120	144465458	144451120	144465458	-	transcript4186.chr8.nic@CYHR1	transcript4186.chr8.nic	protein_coding	144465353,144464809,144453222,144451120	144465458,144465096,144453460,144452570	Gene ID= ENSG00000187954.12 TPM= 16.99 Transcript Type= NA
chr8	144449582	144457641	144449582	144457641	-	ENST00000528663.1@CYHR1	ENST00000528663.1	protein_coding	144453222,144452359,144449582	144457641,144452570,144450770	Gene ID= ENSG00000187954.12 TPM= 5.84 Transcript Type= retained_intron
chr8	144451120	144457928	144451120	144457928	-	ENST00000533173.1@CYHR1	ENST00000533173.1	protein_coding	144453222,144451120	144457928,144452570	Gene ID= ENSG00000187954.12 TPM= 7.97 Transcript Type= retained_intron
chr8	144449931	144462861	144449931	144462861	-	ENST00000530374.5@CYHR1	ENST00000530374.5	protein_coding	144462283,144453222,144452359,144449931	144462861,144453460,144452570,144450770	Gene ID= ENSG00000187954.12 TPM= 34.52 Transcript Type= protein_coding
chr8	144463817	144465677	144463817	144465677	-	ENST00000306145.9@CYHR1	ENST00000306145.9	protein_coding	144465353,144464809,144463817	144465677,144465096,144464612	Gene ID= ENSG00000187954.12 TPM= 84.97 Transcript Type= protein_coding
chr8	144466325	144474113	144466325	144474113	+	transcript4203.chr8.nnic@KIFC2	transcript4203.chr8.nnic	protein_coding	144466325,144466760,144466959,144467203,144467485,144467714,144467859,144468329,144468536,144468725,144469271,144469490,144471942,144472138,144472361,144472577,144472795,144473132	144466518,144466838,144467110,144467341,144467630,144467779,144467987,144468406,144468650,144468834,144469379,144469647,144472046,144472259,144472484,144472706,144473051,144474113	Gene ID= ENSG00000167702.11 TPM= 8.5 Transcript Type= NA
chr8	144477972	144502121	144477972	144502121	+	transcript4212.chr8.nic@PPP1R16A	transcript4212.chr8.nic	protein_coding	144477972,144490034,144496461,144498770,144498916,144500096,144500267,144500487,144500686,144500842,144501129,144501520	144478127,144490212,144497453,144498840,144499061,144500199,144500391,144500612,144500761,144500971,144501294,144502121	Gene ID= ENSG00000160972.9 TPM= 52.05 Transcript Type= NA
chr8	144501089	144502120	144501089	144502120	+	ENST00000528430.2@PPP1R16A	ENST00000528430.2	protein_coding	144501089,144501520	144501294,144502120	Gene ID= ENSG00000160972.9 TPM= 101.97 Transcript Type= retained_intron
chr8	144494099	144496280	144494099	144496280	-	transcript4231.chr8.nnic@NA	transcript4231.chr8.nnic	NA	144494099	144496280	Gene ID= novel_gene_chr8_4232 TPM= 3.19 Transcript Type= NA
chr8	144500789	144502119	144500789	144502119	+	transcript4229.chr8.nnic@NA	transcript4229.chr8.nnic	NA	144500789	144502119	Gene ID= novel_gene_chr8_4230 TPM= 5.31 Transcript Type= NA
chr8	144502694	144507171	144502694	144507171	+	transcript4215.chr8.nnic@GPT	transcript4215.chr8.nnic	protein_coding	144502694,144504142,144504604,144504771,144504998,144505246,144505848,144505995,144506232,144506501,144506731,144506910	144503125,144504466,144504693,144504879,144505131,144505489,144505927,144506131,144506406,144506656,144506843,144507171	Gene ID= ENSG00000167701.13 TPM= 17.35 Transcript Type= NA
chr8	144502973	144507174	144502973	144507174	+	ENST00000528431.5@GPT	ENST00000528431.5	protein_coding	144502973,144504301,144504604,144504771,144504998,144505246,144505848,144505995,144506232,144506501,144506731,144506910	144503125,144504466,144504693,144504879,144505131,144505489,144505927,144506131,144506406,144506656,144506843,144507174	Gene ID= ENSG00000167701.13 TPM= 5.66 Transcript Type= protein_coding
chr8	144504082	144507171	144504082	144507171	+	ENST00000394955.2@GPT	ENST00000394955.2	protein_coding	144504082,144504604,144504771,144504998,144505246,144505848,144505995,144506232,144506501,144506731,144506910	144504466,144504693,144504879,144505131,144505489,144505927,144506131,144506406,144506656,144506843,144507171	Gene ID= ENSG00000167701.13 TPM= 17.35 Transcript Type= protein_coding
chr8	144508801	144511213	144508801	144511213	+	transcript4240.chr8.nic@MFSD3	transcript4240.chr8.nic	protein_coding	144508801,144510360,144510598,144510991	144510015,144510507,144510903,144511213	Gene ID= ENSG00000167700.8 TPM= 2.12 Transcript Type= NA
chr8	144508427	144511213	144508427	144511213	+	transcript4241.chr8.nic@MFSD3	transcript4241.chr8.nic	protein_coding	144508427,144510598,144510794,144510991	144510507,144510722,144510903,144511213	Gene ID= ENSG00000167700.8 TPM= 3.19 Transcript Type= NA
chr8	144509070	144511213	144509070	144511213	+	transcript4242.chr8.nic@MFSD3	transcript4242.chr8.nic	protein_coding	144509070,144510598,144510794,144510991	144510015,144510722,144510903,144511213	Gene ID= ENSG00000167700.8 TPM= 3.72 Transcript Type= NA
chr8	144508922	144511210	144508922	144511210	+	transcript4244.chr8.nic@MFSD3	transcript4244.chr8.nic	protein_coding	144508922,144510598,144510794	144510507,144510722,144511210	Gene ID= ENSG00000167700.8 TPM= 2.66 Transcript Type= NA
chr8	144509059	144511219	144509059	144511219	+	transcript4247.chr8.nic@MFSD3	transcript4247.chr8.nic	protein_coding	144509059,144510598	144510507,144511219	Gene ID= ENSG00000167700.8 TPM= 3.72 Transcript Type= NA
chr8	144509074	144511213	144509074	144511213	+	ENST00000301327.4@MFSD3	ENST00000301327.4	protein_coding	144509074,144510360,144510598,144510794,144510991	144510015,144510507,144510722,144510903,144511213	Gene ID= ENSG00000167700.8 TPM= 71.7 Transcript Type= protein_coding
chr8	144517971	144522024	144517971	144522024	+	transcript4259.chr8.nic@LRRC14	transcript4259.chr8.nic	protein_coding	144517971,144519701,144520238,144520911	144518041,144520054,144520822,144522024	Gene ID= ENSG00000160959.7 TPM= 3.19 Transcript Type= NA
chr8	144522377	144529125	144522377	144529125	-	transcript4251.chr8.nic@LRRC24	transcript4251.chr8.nic	protein_coding	144528761,144528024,144526960,144524816,144524441,144524110,144522377	144529125,144528072,144527787,144525033,144524719,144524278,144523409	Gene ID= ENSG00000254402.6 TPM= 3.72 Transcript Type= NA
chr8	144522377	144526911	144522377	144526911	-	transcript4262.chr8.nic@LRRC24	transcript4262.chr8.nic	protein_coding	144524816,144524441,144524110,144522377	144526911,144524719,144524278,144523409	Gene ID= ENSG00000254402.6 TPM= 4.78 Transcript Type= NA
chr8	144523129	144523889	144523129	144523889	+	transcript4267.chr8.nnic@NA	transcript4267.chr8.nnic	NA	144523129	144523889	Gene ID= novel_gene_chr8_4268 TPM= 2.12 Transcript Type= NA
chr8	144526252	144529111	144526252	144529111	-	transcript4258.chr8.nnic@C8orf82	transcript4258.chr8.nnic	protein_coding	144528761,144528268,144528024,144526960,144526252	144529111,144528435,144528072,144527787,144526639	Gene ID= ENSG00000213563.6 TPM= 3.72 Transcript Type= NA
chr8	144526252	144529132	144526252	144529132	-	ENST00000534680.5@C8orf82	ENST00000534680.5	protein_coding	144528761,144528024,144526960,144526252	144529132,144528072,144527787,144526639	Gene ID= ENSG00000213563.6 TPM= 83.38 Transcript Type= nonsense_mediated_decay
chr8	144525733	144529132	144525733	144529132	-	ENST00000524821.5@C8orf82	ENST00000524821.5	protein_coding	144528761,144528024,144525733	144529132,144528072,144527787	Gene ID= ENSG00000213563.6 TPM= 64.79 Transcript Type= protein_coding
chr8	144772229	144787347	144772229	144787347	-	transcript4289.chr8.nnic@ZNF34	transcript4289.chr8.nnic	protein_coding	144787279,144780875,144780228,144778439,144778038,144777458,144772229	144787347,144780965,144780280,144778525,144778164,144777577,144774605	Gene ID= ENSG00000196378.11 TPM= 4.25 Transcript Type= NA
chr8	144773114	144787325	144773114	144787325	-	ENST00000429371.6@ZNF34	ENST00000429371.6	protein_coding	144787279,144780228,144778439,144778038,144777458,144773114	144787325,144780280,144778525,144778164,144777577,144774605	Gene ID= ENSG00000196378.11 TPM= 2.12 Transcript Type= protein_coding
chr8	144789769	144792389	144789769	144792389	-	ENST00000394920.6@RPL8	ENST00000394920.6	protein_coding	144792245,144791992,144791773,144791277,144790355,144789769	144792389,144792140,144791914,144791495,144790470,144789962	Gene ID= ENSG00000161016.17 TPM= 479.38 Transcript Type= protein_coding
chr8	144789785	144792351	144789785	144792351	-	ENST00000528957.5@RPL8	ENST00000528957.5	protein_coding	144791992,144791773,144791277,144790355,144789785	144792351,144791914,144791495,144790470,144789962	Gene ID= ENSG00000161016.17 TPM= 5.66 Transcript Type= protein_coding
chr8	144789768	144791959	144789768	144791959	-	ENST00000526668.5@RPL8	ENST00000526668.5	protein_coding	144791773,144791277,144790355,144789768	144791959,144791495,144790470,144789962	Gene ID= ENSG00000161016.17 TPM= 410.34 Transcript Type= retained_intron
chr8	144827518	144843222	144827518	144843222	+	ENST00000544249.2@ZNF7	ENST00000544249.2	protein_coding	144827518,144829043,144837391,144841355	144827609,144829090,144837507,144843222	Gene ID= ENSG00000147789.15 TPM= 2.12 Transcript Type= protein_coding
chr8	144827559	144843220	144827559	144843220	+	ENST00000446747.6@ZNF7	ENST00000446747.6	protein_coding	144827559,144829043,144829445,144837391,144841355	144827609,144829090,144829604,144837507,144843220	Gene ID= ENSG00000147789.15 TPM= 3.19 Transcript Type= protein_coding
chr8	144850166	144853067	144850166	144853067	-	ENST00000402718.4@COMMD5	ENST00000402718.4	protein_coding	144852993,144850166	144853067,144851395	Gene ID= ENSG00000170619.9 TPM= 3.19 Transcript Type= protein_coding
chr8	144850188	144853736	144850188	144853736	-	ENST00000450361.2@COMMD5	ENST00000450361.2	protein_coding	144853372,144850188	144853736,144851395	Gene ID= ENSG00000170619.9 TPM= 3.19 Transcript Type= protein_coding
chr8	144850219	144853034	144850219	144853034	-	ENST00000305103.3@COMMD5	ENST00000305103.3	protein_coding	144852839,144850219	144853034,144851395	Gene ID= ENSG00000170619.9 TPM= 5.31 Transcript Type= protein_coding
chr8	144876951	144901461	144876951	144901461	-	ENST00000292579.11@ZNF250	ENST00000292579.11	protein_coding	144901399,144890308,144889933,144889581,144886840,144876951	144901461,144890403,144890074,144889694,144886902,144882836	Gene ID= ENSG00000196150.13 TPM= 6.37 Transcript Type= protein_coding
chr8	144881139	144901431	144881139	144901431	-	ENST00000417550.6@ZNF250	ENST00000417550.6	protein_coding	144901399,144890308,144889933,144889581,144886840,144881139	144901431,144890403,144890059,144889694,144886902,144882836	Gene ID= ENSG00000196150.13 TPM= 3.19 Transcript Type= protein_coding
chr8	144995722	145002875	144995722	145002875	-	ENST00000534037.6@ZNF252P	ENST00000534037.6	transcribed_unitary_pseudogene	145002817,144999603,144995722	145002875,144999769,144996607	Gene ID= ENSG00000196922.10 TPM= 1.06 Transcript Type= processed_transcript
chr8	145052378	145056030	145052378	145056030	+	ENST00000331434.6@C8orf33	ENST00000331434.6	protein_coding	145052378,145052586,145053062,145053297,145054018	145052497,145052897,145053146,145053443,145056030	Gene ID= ENSG00000182307.12 TPM= 23.37 Transcript Type= protein_coding
chr8	145052467	145056030	145052467	145056030	+	ENST00000530455.5@C8orf33	ENST00000530455.5	protein_coding	145052467,145053062,145053297,145054018	145052897,145053146,145053443,145056030	Gene ID= ENSG00000182307.12 TPM= 13.81 Transcript Type= retained_intron
chr9	121041	179147	121041	179147	-	ENST00000377400.8@CBWD1	ENST00000377400.8	protein_coding	178816,175698,173270,172081,163978,162432,156481,154709,152034,146102,134979,123386,123217,121961,121041	179147,175784,173366,172172,164037,162469,156527,154795,152078,146158,135030,123454,123282,122090,121573	Gene ID= ENSG00000172785.18 TPM= 70.45 Transcript Type= protein_coding
chr9	121041	179031	121041	179031	-	transcript6.chr9.nnic@CBWD1	transcript6.chr9.nnic	protein_coding	178816,175698,173270,172081,163978,162432,156481,154709,134979,123386,123217,121961,121041	179031,175784,173366,172172,164037,162469,156527,154795,135030,123454,123282,122090,121573	Gene ID= ENSG00000172785.18 TPM= 4.6 Transcript Type= NA
chr9	121060	179047	121060	179047	-	ENST00000314367.14@CBWD1	ENST00000314367.14	protein_coding	178816,177723,175698,173270,172081,163978,162432,156481,154709,152034,146102,134979,123386,123217,121961,121060	179047,177820,175784,173366,172172,164037,162469,156527,154795,152078,146158,135030,123454,123282,122090,121573	Gene ID= ENSG00000172785.18 TPM= 8.85 Transcript Type= protein_coding
chr9	171953	179045	171953	179045	-	ENST00000382393.2@CBWD1	ENST00000382393.2	protein_coding	178816,175698,171953	179045,175784,173366	Gene ID= ENSG00000172785.18 TPM= 36.11 Transcript Type= protein_coding
chr9	214858	405099	214858	405099	+	transcript12.chr9.nic@DOCK8	transcript12.chr9.nic	protein_coding	214858,271627,286461,289510,304581,311954,317043,325671,328022,332398,334225,336582,339006,340159,368018,370230,371428,372185,376210,376977,379771,382513,386331,390471,396785,399146,404918	215029,271729,286636,289581,304704,312166,317128,325737,328171,332478,334384,336718,339099,340321,368135,370300,371566,372286,376305,377211,379935,382685,386426,390566,396934,399259,405099	Gene ID= ENSG00000107099.15 TPM= 3.19 Transcript Type= NA
chr9	504447	746102	504447	746102	+	transcript23.chr9.nnic@KANK1	transcript23.chr9.nnic	protein_coding	504447,676890,710804,730051,731158,734748,738285,740792,742205,744491,745173	504754,677009,713464,730248,731266,734835,738504,740934,742405,744589,746102	Gene ID= ENSG00000107104.18 TPM= 14.09 Transcript Type= NA
chr9	693680	746102	693680	746102	+	transcript25.chr9.nnic@KANK1	transcript25.chr9.nnic	protein_coding	693680,710804,730051,731158,732378,734748,738285,740792,742205,744491,745173	693786,713464,730194,731266,732617,734835,738504,740934,742405,744589,746102	Gene ID= ENSG00000107104.18 TPM= 13.73 Transcript Type= NA
chr9	693680	746102	693680	746102	+	transcript26.chr9.nnic@KANK1	transcript26.chr9.nnic	protein_coding	693680,710804,730051,731158,732378,734748,738285,740792,742205,744491,745173	693786,713464,730248,731266,732617,734835,738504,740934,742405,744589,746102	Gene ID= ENSG00000107104.18 TPM= 34.98 Transcript Type= NA
chr9	693680	746104	693680	746104	+	transcript30.chr9.nnic@KANK1	transcript30.chr9.nnic	protein_coding	693680,710804,730051,731158,732378,734748,738285,740792,742205,744491	693786,713464,730248,731266,732617,734835,738504,740934,742405,746104	Gene ID= ENSG00000107104.18 TPM= 11.33 Transcript Type= NA
chr9	693680	746102	693680	746102	+	transcript31.chr9.nnic@KANK1	transcript31.chr9.nnic	protein_coding	693680,710804,730051,731158,734748,738285,740792,742205,744491,745173	693786,713464,730248,731266,734835,738504,740934,742405,744589,746102	Gene ID= ENSG00000107104.18 TPM= 30.03 Transcript Type= NA
chr9	504695	549527	504695	549527	+	transcript42.chr9.nnic@KANK1	transcript42.chr9.nnic	protein_coding	504695,539516,540508,549190	504754,539633,540667,549527	Gene ID= ENSG00000107104.18 TPM= 4.25 Transcript Type= NA
chr9	504716	746105	504716	746105	+	ENST00000382297.6@KANK1	ENST00000382297.6	protein_coding	504716,676890,710804,730051,731158,732378,734748,738285,740792,742205,744491,745173	504754,677009,713464,730248,731266,732617,734835,738504,740934,742405,744589,746105	Gene ID= ENSG00000107104.18 TPM= 21.17 Transcript Type= protein_coding
chr9	718955	720501	718955	720501	-	transcript48.chr9.nnic@NA	transcript48.chr9.nnic	NA	718955	720501	Gene ID= novel_gene_chr9_49 TPM= 10.62 Transcript Type= NA
chr9	2015186	2193620	2015186	2193620	+	ENST00000357248.8@SMARCA2	ENST00000357248.8	protein_coding	2015186,2028987,2032952,2039466,2047229,2054597,2056672,2058291,2060816,2070418,2073212,2073566,2076229,2077629,2081832,2083347,2084086,2086829,2088500,2096657,2097385,2101570,2104003,2110254,2115822,2119458,2123719,2161686,2181571,2182141,2186096,2191266,2192704	2015404,2029247,2033081,2039900,2047484,2054723,2056845,2058464,2060986,2070471,2073342,2073623,2076329,2077776,2081995,2083413,2084196,2087071,2088613,2096764,2097471,2101616,2104169,2110417,2116049,2119535,2123937,2161903,2181676,2182242,2186228,2191408,2193620	Gene ID= ENSG00000080503.22 TPM= 36.11 Transcript Type= protein_coding
chr9	2157683	2193574	2157683	2193574	+	ENST00000324954.10@SMARCA2	ENST00000324954.10	protein_coding	2157683,2161686,2181571,2182141,2186096,2191266,2192704	2157890,2161903,2181676,2182242,2186228,2191408,2193574	Gene ID= ENSG00000080503.22 TPM= 4.25 Transcript Type= protein_coding
chr9	2017605	2019512	2017605	2019512	+	transcript68.chr9.nnic@NA	transcript68.chr9.nnic	NA	2017605	2019512	Gene ID= novel_gene_chr9_69 TPM= 3.19 Transcript Type= NA
chr9	2535652	2622344	2535652	2622344	-	transcript88.chr9.nnic@VLDLR-AS1	transcript88.chr9.nnic	antisense_RNA	2622100,2539148,2536359,2535652	2622344,2539552,2536453,2536015	Gene ID= ENSG00000236404.8 TPM= 2.12 Transcript Type= NA
chr9	2535652	2570754	2535652	2570754	-	ENST00000424605.5@VLDLR-AS1	ENST00000424605.5	antisense_RNA	2570622,2539399,2536359,2535652	2570754,2539552,2536453,2536015	Gene ID= ENSG00000236404.8 TPM= 3.72 Transcript Type= antisense_RNA
chr9	2535652	2621612	2535652	2621612	-	transcript90.chr9.nic@VLDLR-AS1	transcript90.chr9.nic	antisense_RNA	2621229,2539399,2536359,2535652	2621612,2539552,2536453,2536015	Gene ID= ENSG00000236404.8 TPM= 2.66 Transcript Type= NA
chr9	2584569	2585272	2584569	2585272	+	transcript93.chr9.nnic@NA	transcript93.chr9.nnic	NA	2584569	2585272	Gene ID= novel_gene_chr9_94 TPM= 2.12 Transcript Type= NA
chr9	2596471	2599421	2596471	2599421	+	transcript95.chr9.nnic@NA	transcript95.chr9.nnic	NA	2596471	2599421	Gene ID= novel_gene_chr9_96 TPM= 2.12 Transcript Type= NA
chr9	2621600	2654480	2621600	2654480	+	transcript78.chr9.nnic@VLDLR	transcript78.chr9.nnic	protein_coding	2621600,2635453,2639859,2641377,2643160,2643628,2643837,2644734,2644957,2645574,2646399,2647474,2648208,2648669,2650370,2651415,2651874,2652780,2653833	2622271,2635572,2639981,2641499,2643531,2643750,2643959,2644853,2645082,2645745,2646552,2647592,2648347,2648810,2650516,2651498,2651954,2652949,2654480	Gene ID= ENSG00000147852.15 TPM= 7.97 Transcript Type= NA
chr9	2621575	2654480	2621575	2654480	+	transcript81.chr9.nic@VLDLR	transcript81.chr9.nic	protein_coding	2621575,2635453,2639859,2643160,2643628,2643837,2644734,2644957,2645574,2646334,2647474,2648208,2648669,2650370,2651415,2651874,2652780,2653833	2622271,2635572,2639981,2643531,2643750,2643959,2644853,2645082,2645745,2646552,2647592,2648347,2648810,2650516,2651498,2651954,2652949,2654480	Gene ID= ENSG00000147852.15 TPM= 4.78 Transcript Type= NA
chr9	2622100	2654480	2622100	2654480	+	ENST00000382099.2@VLDLR	ENST00000382099.2	protein_coding	2622100,2635453,2639859,2641377,2643160,2643628,2643837,2644734,2644957,2645574,2646334,2647474,2648208,2648669,2650370,2651874,2652780,2653833	2622271,2635572,2639981,2641499,2643531,2643750,2643959,2644853,2645082,2645745,2646552,2647592,2648347,2648810,2650516,2651954,2652949,2654480	Gene ID= ENSG00000147852.15 TPM= 4.25 Transcript Type= protein_coding
chr9	2798914	2802540	2798914	2802540	+	transcript97.chr9.nnic@NA	transcript97.chr9.nnic	NA	2798914	2802540	Gene ID= novel_gene_chr9_98 TPM= 2.12 Transcript Type= NA
chr9	2804164	2844241	2804164	2844241	-	ENST00000397885.2@PUM3	ENST00000397885.2	protein_coding	2844045,2838426,2837180,2834031,2833357,2831251,2830962,2829774,2828675,2827073,2824717,2823781,2820018,2812220,2811361,2810344,2807814,2804164	2844241,2838517,2837401,2834166,2833432,2831344,2831028,2829948,2828778,2827151,2824815,2823834,2820098,2812362,2811583,2810431,2807904,2804463	Gene ID= ENSG00000080608.9 TPM= 26.55 Transcript Type= protein_coding
chr9	2828041	2844130	2828041	2844130	-	transcript103.chr9.nic@PUM3	transcript103.chr9.nic	protein_coding	2844045,2838426,2837180,2834031,2833357,2831251,2830962,2829774,2828041	2844130,2838517,2837401,2834166,2833432,2831344,2831028,2829948,2828778	Gene ID= ENSG00000080608.9 TPM= 5.31 Transcript Type= NA
chr9	2844319	2844693	2844319	2844693	+	transcript106.chr9.nnic@NA	transcript106.chr9.nnic	NA	2844319	2844693	Gene ID= novel_gene_chr9_107 TPM= 2.12 Transcript Type= NA
chr9	3893024	3896679	3893024	3896679	+	transcript111.chr9.nnic@NA	transcript111.chr9.nnic	NA	3893024	3896679	Gene ID= novel_gene_chr9_112 TPM= 2.12 Transcript Type= NA
chr9	4662315	4665258	4662315	4665258	+	ENST00000381883.3@PLPP6	ENST00000381883.3	protein_coding	4662315	4665258	Gene ID= ENSG00000205808.5 TPM= 7.44 Transcript Type= protein_coding
chr9	4676600	4679471	4676600	4679471	-	ENST00000609131.1@CDC37L1-AS1	ENST00000609131.1	lincRNA	4679387,4676600	4679471,4676749	Gene ID= ENSG00000273061.1 TPM= 1.06 Transcript Type= lincRNA
chr9	4679566	4708398	4679566	4708398	+	ENST00000381854.3@CDC37L1	ENST00000381854.3	protein_coding	4679566,4684877,4688513,4697096,4697757,4701864,4706011	4679899,4685158,4688606,4697211,4697879,4702028,4708398	Gene ID= ENSG00000106993.11 TPM= 11.68 Transcript Type= protein_coding
chr9	4709559	4741799	4709559	4741799	-	ENST00000611749.4@AK3	ENST00000611749.4	protein_coding	4741721,4722506,4719135,4718419,4709559	4741799,4722625,4719307,4718537,4713096	Gene ID= ENSG00000147853.16 TPM= 3.19 Transcript Type= protein_coding
chr9	4711155	4741318	4711155	4741318	-	ENST00000381809.7@AK3	ENST00000381809.7	protein_coding	4740937,4722506,4719135,4718419,4711155	4741318,4722625,4719307,4718537,4713096	Gene ID= ENSG00000147853.16 TPM= 45.67 Transcript Type= protein_coding
chr9	4712045	4742043	4712045	4742043	-	ENST00000359883.6@AK3	ENST00000359883.6	protein_coding	4741972,4722506,4719135,4718419,4712045	4742043,4722625,4719307,4718537,4713096	Gene ID= ENSG00000147853.16 TPM= 4.25 Transcript Type= protein_coding
chr9	4749254	4749873	4749254	4749873	+	transcript135.chr9.nnic@NA	transcript135.chr9.nnic	NA	4749254	4749873	Gene ID= novel_gene_chr9_136 TPM= 2.12 Transcript Type= NA
chr9	4792869	4861064	4792869	4861064	+	ENST00000381750.8@RCL1	ENST00000381750.8	protein_coding	4792869,4823548,4826858,4833154,4834141,4841232,4844525,4849447,4860125	4793227,4823619,4827033,4833228,4834265,4841357,4844681,4849550,4861064	Gene ID= ENSG00000120158.11 TPM= 7.44 Transcript Type= protein_coding
chr9	4985245	5128183	4985245	5128183	+	ENST00000381652.3@JAK2	ENST00000381652.3	protein_coding	4985245,4985940,5021963,5029783,5044403,5050686,5054563,5055669,5064883,5066678,5069022,5069925,5072492,5073698,5077453,5078306,5080229,5080533,5081725,5089674,5090446,5090739,5123004,5126333,5126684	4985630,4986022,5022213,5029906,5044520,5050831,5054884,5055788,5065040,5066789,5069208,5070052,5072626,5073785,5077580,5078444,5080380,5080683,5081861,5089863,5090570,5090911,5123121,5126446,5128183	Gene ID= ENSG00000096968.13 TPM= 23.37 Transcript Type= protein_coding
chr9	5129313	5129443	5129313	5129443	+	transcript155.chr9.nnic@NA	transcript155.chr9.nnic	NA	5129313	5129443	Gene ID= novel_gene_chr9_156 TPM= 3.19 Transcript Type= NA
chr9	5357973	5437925	5357973	5437925	-	transcript162.chr9.nnic@PLGRKT	transcript162.chr9.nnic	protein_coding	5437789,5436569,5381863,5361758,5361078,5357973	5437925,5436694,5382031,5361888,5361187,5358360	Gene ID= ENSG00000107020.9 TPM= 3.19 Transcript Type= NA
chr9	5357973	5437860	5357973	5437860	-	transcript163.chr9.nic@PLGRKT	transcript163.chr9.nic	protein_coding	5437632,5436569,5431897,5361758,5361078,5357973	5437860,5436694,5431983,5361888,5361187,5358360	Gene ID= ENSG00000107020.9 TPM= 2.12 Transcript Type= NA
chr9	5357973	5438636	5357973	5438636	-	transcript166.chr9.nnic@PLGRKT	transcript166.chr9.nnic	protein_coding	5438213,5436569,5431897,5361758,5361078,5357973	5438636,5436694,5431983,5361888,5361187,5358360	Gene ID= ENSG00000107020.9 TPM= 2.12 Transcript Type= NA
chr9	5357973	5437928	5357973	5437928	-	transcript168.chr9.nnic@PLGRKT	transcript168.chr9.nnic	protein_coding	5437789,5436569,5361758,5361078,5357973	5437928,5436694,5361888,5361187,5358360	Gene ID= ENSG00000107020.9 TPM= 4.25 Transcript Type= NA
chr9	5357973	5437878	5357973	5437878	-	ENST00000223864.6@PLGRKT	ENST00000223864.6	protein_coding	5437789,5436569,5431897,5361758,5361078,5357973	5437878,5436694,5431983,5361888,5361187,5358360	Gene ID= ENSG00000107020.9 TPM= 30.8 Transcript Type= protein_coding
chr9	5450525	5470547	5450525	5470547	+	ENST00000381577.3@CD274	ENST00000381577.3	protein_coding	5450525,5456100,5457079,5462834,5465499,5466770,5467840	5450596,5456165,5457420,5463121,5465606,5466829,5470547	Gene ID= ENSG00000120217.13 TPM= 14.87 Transcript Type= protein_coding
chr9	5784573	5833117	5784573	5833117	-	ENST00000339450.9@ERMP1	ENST00000339450.9	protein_coding	5832690,5830727,5825092,5823896,5812889,5812125,5811111,5810011,5805611,5805027,5801176,5798806,5797817,5787430,5784573	5833117,5831028,5825219,5824001,5813035,5812217,5811323,5810231,5805785,5805217,5801328,5799008,5797932,5787593,5787308	Gene ID= ENSG00000099219.13 TPM= 15.93 Transcript Type= protein_coding
chr9	5782905	5783118	5782905	5783118	+	transcript192.chr9.nnic@NA	transcript192.chr9.nnic	NA	5782905	5783118	Gene ID= novel_gene_chr9_193 TPM= 2.12 Transcript Type= NA
chr9	5968162	6008476	5968162	6008476	-	transcript196.chr9.nic@KIAA2026	transcript196.chr9.nic	protein_coding	6007195,5988345,5968162	6008476,5988545,5969436	Gene ID= ENSG00000183354.11 TPM= 8.5 Transcript Type= NA
chr9	6011043	6015618	6011043	6015618	-	ENST00000259569.5@RANBP6	ENST00000259569.5	protein_coding	6011043	6015618	Gene ID= ENSG00000137040.9 TPM= 33.99 Transcript Type= protein_coding
chr9	6215788	6257983	6215788	6257983	+	transcript202.chr9.nic@IL33	transcript202.chr9.nic	protein_coding	6215788,6241684,6250474,6251140,6252866,6253552,6254462,6255968	6215852,6241785,6250599,6251265,6252991,6253602,6254553,6257983	Gene ID= ENSG00000137033.11 TPM= 2.12 Transcript Type= NA
chr9	6757966	7175648	6757966	7175648	+	transcript211.chr9.nic@KDM4C	transcript211.chr9.nic	protein_coding	6757966,6792972,6805599,6814631,6849507,6880012,6887960,6893095,6980925,6984166,6986344,6990416,7011698,7013788,7015853,7046862,7049092,7103685,7105402,7128066,7165238,7169798,7174553	6758203,6793132,6805774,6814745,6849700,6880061,6888063,6893232,6981118,6984404,6986666,6990524,7011879,7014001,7015929,7046917,7049200,7103870,7105500,7128236,7165357,7169890,7175648	Gene ID= ENSG00000107077.18 TPM= 7.44 Transcript Type= NA
chr9	6834045	6834865	6834045	6834865	-	transcript219.chr9.nnic@NA	transcript219.chr9.nnic	NA	6834045	6834865	Gene ID= novel_gene_chr9_220 TPM= 2.12 Transcript Type= NA
chr9	7796490	7800067	7796490	7800067	-	ENST00000358227.4@DMAC1	ENST00000358227.4	protein_coding	7799461,7796490	7800067,7798637	Gene ID= ENSG00000137038.7 TPM= 6.37 Transcript Type= protein_coding
chr9	7798344	7799786	7798344	7799786	-	transcript226.chr9.nnic@DMAC1	transcript226.chr9.nnic	protein_coding	7799547,7798344	7799786,7798637	Gene ID= ENSG00000137038.7 TPM= 9.56 Transcript Type= NA
chr9	12693435	12710290	12693435	12710290	+	ENST00000388918.9@TYRP1	ENST00000388918.9	protein_coding	12693435,12693912,12695515,12698451,12702271,12704526,12707997,12708977	12693478,12694381,12695837,12698655,12702438,12704705,12708143,12710290	Gene ID= ENSG00000107165.12 TPM= 8.5 Transcript Type= protein_coding
chr9	12695714	12711567	12695714	12711567	+	transcript231.chr9.nic@TYRP1	transcript231.chr9.nic	protein_coding	12695714,12698451,12702271,12704526,12707997,12708977	12695837,12698655,12702438,12704705,12708143,12711567	Gene ID= ENSG00000107165.12 TPM= 11.68 Transcript Type= NA
chr9	12695714	12710089	12695714	12710089	+	transcript233.chr9.nic@TYRP1	transcript233.chr9.nic	protein_coding	12695714,12698451,12702271,12704526,12708977	12695837,12698655,12702438,12704705,12710089	Gene ID= ENSG00000107165.12 TPM= 3.19 Transcript Type= NA
chr9	12775021	12822131	12775021	12822131	+	ENST00000319264.3@LURAP1L	ENST00000319264.3	protein_coding	12775021,12821386	12776027,12822131	Gene ID= ENSG00000153714.5 TPM= 1.06 Transcript Type= protein_coding
chr9	13105704	13279590	13105704	13279590	-	ENST00000319217.11@MPDZ	ENST00000319217.11	protein_coding	13279400,13250300,13247635,13224374,13223571,13222233,13221372,13219559,13217180,13216774,13205916,13205036,13196121,13193167,13192131,13190114,13188784,13186270,13183418,13176136,13175752,13168366,13162691,13158018,13150511,13147548,13143466,13139987,13137957,13136712,13136092,13133824,13126680,13126516,13125216,13123153,13122087,13121739,13119502,13115248,13113931,13113011,13112024,13110636,13109952,13108936,13105704	13279590,13250372,13247801,13224583,13223710,13222446,13221500,13219768,13217294,13216862,13206099,13205107,13196230,13193313,13192295,13190299,13188993,13186386,13183585,13176417,13175875,13168564,13162795,13158110,13150688,13147658,13143564,13140149,13138153,13136803,13136182,13133904,13126772,13126590,13125390,13123298,13122170,13121932,13119649,13115334,13114021,13113054,13112146,13110740,13110064,13109059,13107111	Gene ID= ENSG00000107186.16 TPM= 18.06 Transcript Type= protein_coding
chr9	13786917	13787666	13786917	13787666	-	transcript264.chr9.nnic@NA	transcript264.chr9.nnic	NA	13786917	13787666	Gene ID= novel_gene_chr9_265 TPM= 2.12 Transcript Type= NA
chr9	14013186	14016266	14013186	14016266	+	transcript262.chr9.nnic@NA	transcript262.chr9.nnic	NA	14013186	14016266	Gene ID= novel_gene_chr9_263 TPM= 3.19 Transcript Type= NA
chr9	14087629	14308073	14087629	14308073	-	ENST00000636057.1@NFIB	ENST00000636057.1	protein_coding	14307920,14306989,14179727,14155825,14150145,14146689,14125632,14120440,14087629	14308073,14307520,14179780,14155893,14150265,14146807,14125766,14120624,14088326	Gene ID= ENSG00000147862.15 TPM= 2.12 Transcript Type= protein_coding
chr9	14087569	14313667	14087569	14313667	-	ENST00000380953.5@NFIB	ENST00000380953.5	protein_coding	14313482,14306989,14179727,14155825,14150145,14146689,14125632,14120440,14116208,14112999,14087569	14313667,14307520,14179780,14155893,14150265,14146807,14125766,14120624,14116346,14113081,14088326	Gene ID= ENSG00000147862.15 TPM= 5.31 Transcript Type= protein_coding
chr9	14082670	14086234	14082670	14086234	-	transcript292.chr9.nnic@NA	transcript292.chr9.nnic	NA	14082670	14086234	Gene ID= novel_gene_chr9_293 TPM= 21.24 Transcript Type= NA
chr9	14116374	14119020	14116374	14119020	+	transcript286.chr9.nnic@NA	transcript286.chr9.nnic	NA	14116374	14119020	Gene ID= novel_gene_chr9_287 TPM= 3.19 Transcript Type= NA
chr9	14195897	14198041	14195897	14198041	-	transcript296.chr9.nnic@NA	transcript296.chr9.nnic	NA	14195897	14198041	Gene ID= novel_gene_chr9_297 TPM= 2.12 Transcript Type= NA
chr9	14226143	14229039	14226143	14229039	+	transcript288.chr9.nnic@NA	transcript288.chr9.nnic	NA	14226143	14229039	Gene ID= novel_gene_chr9_289 TPM= 2.12 Transcript Type= NA
chr9	14314793	14316010	14314793	14316010	-	transcript290.chr9.nnic@NA	transcript290.chr9.nnic	NA	14314793	14316010	Gene ID= novel_gene_chr9_291 TPM= 5.31 Transcript Type= NA
chr9	14615787	14693367	14615787	14693367	-	transcript303.chr9.nnic@ZDHHC21	transcript303.chr9.nnic	protein_coding	14693229,14690337,14688247,14680033,14674187,14672830,14662215,14658749,14639896,14619639,14615787	14693367,14690385,14688307,14680162,14674385,14672928,14662326,14658887,14640012,14619682,14619098	Gene ID= ENSG00000175893.11 TPM= 4.25 Transcript Type= NA
chr9	14611071	14693471	14611071	14693471	-	ENST00000380916.8@ZDHHC21	ENST00000380916.8	protein_coding	14693229,14690337,14680033,14674187,14672830,14662215,14658749,14639896,14619639,14611071	14693471,14690385,14680162,14674385,14672928,14662326,14658887,14640012,14619682,14619098	Gene ID= ENSG00000175893.11 TPM= 2.12 Transcript Type= protein_coding
chr9	15163622	15307360	15163622	15307360	-	ENST00000512701.6@TTC39B	ENST00000512701.6	protein_coding	15307084,15267914,15225917,15214139,15211266,15210088,15203823,15199861,15192590,15191190,15190554,15189725,15189574,15187971,15186944,15185280,15182307,15177697,15175019,15163622	15307360,15267948,15226012,15214249,15211397,15210164,15203890,15199925,15192695,15191255,15190662,15189792,15189633,15188132,15187035,15185406,15182415,15177814,15175135,15172109	Gene ID= ENSG00000155158.20 TPM= 1.06 Transcript Type= protein_coding
chr9	15422734	15465953	15422734	15465953	+	ENST00000467062.5@SNAPC3	ENST00000467062.5	protein_coding	15422734,15423909,15433552,15444602,15447095,15451320,15453041,15457960,15459719,15461631,15462865,15465510	15423193,15423986,15433636,15444706,15447244,15451402,15453205,15458067,15460313,15461805,15462990,15465953	Gene ID= ENSG00000164975.15 TPM= 1.06 Transcript Type= nonsense_mediated_decay
chr9	15422704	15464134	15422704	15464134	+	ENST00000380821.7@SNAPC3	ENST00000380821.7	protein_coding	15422704,15423909,15433552,15444602,15447095,15451320,15453041,15457960,15459719	15423193,15423986,15433636,15444706,15447244,15451402,15453205,15458067,15464134	Gene ID= ENSG00000164975.15 TPM= 1.06 Transcript Type= protein_coding
chr9	15422869	15462460	15422869	15462460	+	ENST00000490969.5@SNAPC3	ENST00000490969.5	protein_coding	15422869,15423909,15433552,15444602,15447095,15451320,15453041,15457960,15459719,15461631	15423193,15423986,15433636,15444706,15447244,15451402,15453205,15458067,15460313,15462460	Gene ID= ENSG00000164975.15 TPM= 12.75 Transcript Type= nonsense_mediated_decay
chr9	15464066	15511019	15464066	15511019	-	ENST00000380733.8@PSIP1	ENST00000380733.8	protein_coding	15510817,15510117,15506561,15489986,15486827,15486006,15479591,15478477,15474009,15472632,15469938,15469266,15468957,15468630,15466748,15464066	15511019,15510329,15506637,15490124,15486931,15486068,15479687,15478552,15474237,15472750,15469993,15469336,15469058,15468843,15466859,15465580	Gene ID= ENSG00000164985.14 TPM= 12.21 Transcript Type= protein_coding
chr9	15464066	15510995	15464066	15510995	-	ENST00000380738.8@PSIP1	ENST00000380738.8	protein_coding	15510817,15510117,15506561,15489986,15486827,15486006,15479591,15478477,15474009,15472632,15469938,15469266,15468957,15468630,15466748,15464066	15510995,15510326,15506637,15490124,15486931,15486068,15479687,15478552,15474237,15472750,15469993,15469336,15469058,15468843,15466859,15465580	Gene ID= ENSG00000164985.14 TPM= 3.72 Transcript Type= protein_coding
chr9	15470636	15510991	15470636	15510991	-	ENST00000380715.5@PSIP1	ENST00000380715.5	protein_coding	15510817,15510117,15506561,15489986,15486827,15486006,15479591,15478477,15474009,15472632,15470636	15510991,15510326,15506637,15490124,15486931,15486068,15479687,15478552,15474237,15472750,15471311	Gene ID= ENSG00000164985.14 TPM= 2.12 Transcript Type= protein_coding
chr9	15504959	15510989	15504959	15510989	-	ENST00000484265.1@PSIP1	ENST00000484265.1	protein_coding	15510817,15510117,15504959	15510989,15510329,15506637	Gene ID= ENSG00000164985.14 TPM= 1.06 Transcript Type= processed_transcript
chr9	16726740	16727523	16726740	16727523	+	transcript359.chr9.nnic@NA	transcript359.chr9.nnic	NA	16726740	16727523	Gene ID= novel_gene_chr9_360 TPM= 2.12 Transcript Type= NA
chr9	17135040	17302051	17135040	17302051	+	ENST00000380641.4@CNTLN	ENST00000380641.4	protein_coding	17135040,17143288,17226203,17235658,17236409,17273733,17298190	17135425,17143376,17226287,17235792,17236588,17273866,17302051	Gene ID= ENSG00000044459.14 TPM= 1.06 Transcript Type= protein_coding
chr9	17134982	17168556	17134982	17168556	+	ENST00000484374.1@CNTLN	ENST00000484374.1	protein_coding	17134982,17143288,17166818	17135425,17143376,17168556	Gene ID= ENSG00000044459.14 TPM= 2.12 Transcript Type= processed_transcript
chr9	17579123	17797129	17579123	17797129	+	ENST00000380607.4@SH3GL2	ENST00000380607.4	protein_coding	17579123,17747066,17761437,17786381,17787380,17789392,17791231,17793367,17795544	17579287,17747134,17761509,17786524,17787513,17789550,17791334,17793497,17797129	Gene ID= ENSG00000107295.9 TPM= 10.62 Transcript Type= protein_coding
chr9	19049395	19050983	19049395	19050983	+	ENST00000380527.2@RRAGA	ENST00000380527.2	protein_coding	19049395	19050983	Gene ID= ENSG00000155876.5 TPM= 209.25 Transcript Type= protein_coding
chr9	19053143	19103119	19053143	19103119	-	ENST00000380502.7@HAUS6	ENST00000380502.7	protein_coding	19102524,19096674,19094317,19093171,19089412,19087091,19086734,19082873,19080479,19078176,19076602,19070219,19063514,19063008,19060088,19057961,19053143	19103119,19096769,19094395,19093303,19089559,19087156,19086782,19083043,19080672,19078302,19076704,19070300,19063580,19063193,19060223,19059001,19056404	Gene ID= ENSG00000147874.10 TPM= 1.06 Transcript Type= protein_coding
chr9	19108375	19128861	19108375	19128861	-	transcript379.chr9.nic@PLIN2	transcript379.chr9.nic	protein_coding	19127419,19126397,19126114,19123565,19120880,19119650,19118321,19116359,19108375	19128861,19126448,19126309,19123647,19121165,19119831,19118455,19116649,19108747	Gene ID= ENSG00000147872.9 TPM= 9.56 Transcript Type= NA
chr9	19115770	19127576	19115770	19127576	-	ENST00000276914.6@PLIN2	ENST00000276914.6	protein_coding	19127419,19126397,19126114,19123565,19120880,19119650,19118321,19115770	19127576,19126448,19126309,19123647,19121165,19119831,19118455,19116649	Gene ID= ENSG00000147872.9 TPM= 59.48 Transcript Type= protein_coding
chr9	19129737	19149290	19129737	19149290	-	ENST00000494753.1@PLIN2	ENST00000494753.1	protein_coding	19149110,19129737	19149290,19131271	Gene ID= ENSG00000147872.9 TPM= 1.06 Transcript Type= processed_transcript
chr9	19453209	19455173	19453209	19455173	+	ENST00000563205.1@AL158206.1	ENST00000563205.1	sense_overlapping	19453209	19455173	Gene ID= ENSG00000260912.1 TPM= 11.68 Transcript Type= sense_overlapping
chr9	20341665	20622543	20341665	20622543	-	ENST00000380338.8@MLLT3	ENST00000380338.8	protein_coding	20622245,20620654,20456704,20448123,20413721,20365669,20363476,20360742,20354808,20353525,20341665	20622543,20620834,20456786,20448266,20414425,20365744,20363605,20360841,20354879,20353596,20346574	Gene ID= ENSG00000171843.15 TPM= 1.06 Transcript Type= protein_coding
chr9	20684237	20875813	20684237	20875813	+	transcript430.chr9.nic@FOCAD	transcript430.chr9.nic	protein_coding	20684237,20715322,20717794,20720380,20740236,20758090,20764869,20770032,20778681,20781727,20789351,20819796,20820324,20820941,20822989,20862578,20865926,20866929,20874681	20684293,20715410,20717868,20720534,20740340,20758191,20765073,20770238,20778768,20781929,20789608,20819900,20820425,20821071,20823115,20862712,20865976,20867012,20875813	Gene ID= ENSG00000188352.12 TPM= 3.19 Transcript Type= NA
chr9	20685198	20692124	20685198	20692124	-	transcript433.chr9.nnic@NA	transcript433.chr9.nnic	NA	20685198	20692124	Gene ID= novel_gene_chr9_434 TPM= 8.5 Transcript Type= NA
chr9	21324052	21335393	21324052	21335393	-	transcript436.chr9.nnic@KLHL9	transcript436.chr9.nnic	protein_coding	21335097,21330794,21329331,21324052	21335393,21330913,21329415,21324321	Gene ID= ENSG00000198642.6 TPM= 4.25 Transcript Type= NA
chr9	21319581	21335406	21319581	21335406	-	transcript440.chr9.nnic@KLHL9	transcript440.chr9.nnic	protein_coding	21335097,21324076,21319581	21335406,21324321,21321633	Gene ID= ENSG00000198642.6 TPM= 2.12 Transcript Type= NA
chr9	21332010	21335404	21332010	21335404	-	transcript447.chr9.nnic@NA	transcript447.chr9.nnic	NA	21332010	21335404	Gene ID= novel_gene_chr9_448 TPM= 9.56 Transcript Type= NA
chr9	21802543	21867078	21802543	21867078	+	ENST00000380172.8@MTAP	ENST00000380172.8	protein_coding	21802543,21815433,21816714,21818035,21837908,21854631,21859303,21861976	21802781,21815519,21816772,21818202,21838010,21854870,21859425,21867078	Gene ID= ENSG00000099810.18 TPM= 1.06 Transcript Type= protein_coding
chr9	21802657	21863286	21802657	21863286	+	ENST00000419385.5@MTAP	ENST00000419385.5	protein_coding	21802657,21815433,21816714,21818035,21837908,21854631,21859303,21861976	21802781,21815544,21816772,21818202,21838010,21854870,21859425,21863286	Gene ID= ENSG00000099810.18 TPM= 2.12 Transcript Type= nonsense_mediated_decay
chr9	21967753	21975098	21967753	21975098	-	ENST00000304494.9@CDKN2A	ENST00000304494.9	protein_coding	21974678,21970902,21967753	21975098,21971208,21968242	Gene ID= ENSG00000147889.17 TPM= 1.06 Transcript Type= protein_coding
chr9	22446841	22455740	22446841	22455740	+	ENST00000325870.2@DMRTA1	ENST00000325870.2	protein_coding	22446841,22451064	22447732,22455740	Gene ID= ENSG00000176399.3 TPM= 1.06 Transcript Type= protein_coding
chr9	25677675	25678856	25677675	25678856	+	transcript461.chr9.nnic@NA	transcript461.chr9.nnic	NA	25677675	25678856	Gene ID= novel_gene_chr9_462 TPM= 2.12 Transcript Type= NA
chr9	25681636	25685894	25681636	25685894	+	transcript465.chr9.nnic@NA	transcript465.chr9.nnic	NA	25681636	25685894	Gene ID= novel_gene_chr9_466 TPM= 2.12 Transcript Type= NA
chr9	26840685	26892804	26840685	26892804	-	ENST00000333916.7@CAAP1	ENST00000333916.7	protein_coding	26892413,26887313,26886104,26884810,26861066,26840685	26892804,26887513,26886188,26884885,26861139,26842647	Gene ID= ENSG00000120159.11 TPM= 1.06 Transcript Type= protein_coding
chr9	26904083	26947463	26904083	26947463	-	ENST00000397292.7@PLAA	ENST00000397292.7	protein_coding	26946897,26935013,26928308,26928100,26926393,26925825,26923178,26920227,26919310,26917097,26913879,26910338,26907834,26904083	26947463,26935206,26928408,26928220,26926560,26925960,26923347,26920384,26919529,26917165,26913947,26910439,26907998,26906076	Gene ID= ENSG00000137055.14 TPM= 1.06 Transcript Type= protein_coding
chr9	26907803	26947233	26907803	26947233	-	ENST00000520884.5@PLAA	ENST00000520884.5	protein_coding	26946897,26935013,26928308,26928100,26926393,26925825,26923178,26920227,26919310,26917097,26913879,26910338,26907803	26947233,26935206,26928408,26928220,26926560,26925960,26923347,26920384,26919529,26917165,26913947,26910439,26907998	Gene ID= ENSG00000137055.14 TPM= 4.25 Transcript Type= protein_coding
chr9	26956373	27062930	26956373	27062930	+	ENST00000380062.9@IFT74	ENST00000380062.9	protein_coding	26956373,26961949,26978128,26980571,26984257,26984499,26988669,26990134,27009020,27011906,27016907,27018647,27029025,27044742,27047274,27048148,27055609,27056334,27060591,27062618	26956516,26962087,26978263,26980619,26984355,26984559,26988728,26990195,27009158,27011968,27017050,27018687,27029104,27044795,27047371,27048274,27055772,27056459,27060651,27062930	Gene ID= ENSG00000096872.15 TPM= 5.31 Transcript Type= protein_coding
chr9	26956414	27020282	26956414	27020282	+	transcript491.chr9.nnic@IFT74	transcript491.chr9.nnic	protein_coding	26956414,26961949,26978128,26980571,26984257,26984499,26988669,26990134,27009020,27011906,27016907,27018647,27020001	26956516,26962087,26978263,26980619,26984355,26984559,26988728,26990195,27009158,27011968,27017050,27018687,27020282	Gene ID= ENSG00000096872.15 TPM= 3.19 Transcript Type= NA
chr9	27109149	27230175	27109149	27230175	+	ENST00000380036.8@TEK	ENST00000380036.8	protein_coding	27109149,27157831,27168495,27169477,27172616,27173222,27180240,27183459,27185485,27190529,27192489,27197315,27202820,27204911,27206582,27209121,27212707,27213484,27217688,27218777,27220049,27228206,27229158	27109642,27158142,27168605,27169629,27172747,27173362,27180368,27183610,27185629,27190690,27192623,27197599,27203119,27205065,27206792,27209231,27212897,27213597,27217758,27218817,27220145,27228305,27230175	Gene ID= ENSG00000120156.20 TPM= 16.99 Transcript Type= protein_coding
chr9	27560786	27573511	27560786	27573511	-	transcript508.chr9.nic@C9orf72	transcript508.chr9.nic	protein_coding	27573431,27566677,27565531,27562381,27560786	27573511,27567164,27565590,27562476,27561649	Gene ID= ENSG00000147894.14 TPM= 5.31 Transcript Type= NA
chr9	27546546	27573450	27546546	27573450	-	ENST00000380003.7@C9orf72	ENST00000380003.7	protein_coding	27573431,27566677,27565531,27562381,27561585,27560227,27558491,27556561,27550650,27548557,27546546	27573450,27567164,27565590,27562476,27561649,27560299,27558607,27556796,27550707,27548666,27548422	Gene ID= ENSG00000147894.14 TPM= 9.56 Transcript Type= protein_coding
chr9	27572465	27573459	27572465	27573459	-	transcript510.chr9.nnic@NA	transcript510.chr9.nnic	NA	27572465	27573459	Gene ID= novel_gene_chr9_511 TPM= 2.12 Transcript Type= NA
chr9	32384620	32450836	32384620	32450836	+	ENST00000379923.5@ACO1	ENST00000379923.5	protein_coding	32384620,32386371,32405485,32407261,32408514,32418128,32418328,32419038,32420856,32423319,32424549,32425838,32427301,32429419,32430418,32431719,32433728,32434559,32436250,32440465,32448896,32449998	32384735,32386438,32405603,32407429,32408651,32418197,32418511,32419177,32421027,32423419,32424665,32425997,32427436,32429503,32430574,32431843,32433832,32434701,32436397,32440587,32449081,32450836	Gene ID= ENSG00000122729.18 TPM= 22.31 Transcript Type= protein_coding
chr9	32551144	32553007	32551144	32553007	+	ENST00000453396.5@SMIM27	ENST00000453396.5	protein_coding	32551144,32552234,32552801	32551693,32552479,32553007	Gene ID= ENSG00000235453.9 TPM= 8.5 Transcript Type= protein_coding
chr9	32552329	32568621	32552329	32568621	+	ENST00000451672.2@SMIM27	ENST00000451672.2	protein_coding	32552329,32566391	32552479,32568621	Gene ID= ENSG00000235453.9 TPM= 1.06 Transcript Type= protein_coding
chr9	32553533	32573184	32553533	32573184	-	ENST00000366466.5@NDUFB6	ENST00000366466.5	protein_coding	32572881,32558910,32553533	32573184,32558954,32553944	Gene ID= ENSG00000165264.10 TPM= 1.06 Transcript Type= protein_coding
chr9	32552999	32573162	32552999	32573162	-	ENST00000379847.7@NDUFB6	ENST00000379847.7	protein_coding	32572881,32570960,32558910,32552999	32573162,32571052,32558954,32553944	Gene ID= ENSG00000165264.10 TPM= 6.37 Transcript Type= protein_coding
chr9	32553651	32573159	32553651	32573159	-	ENST00000350021.2@NDUFB6	ENST00000350021.2	protein_coding	32572881,32570960,32553651	32573159,32571052,32553944	Gene ID= ENSG00000165264.10 TPM= 3.19 Transcript Type= protein_coding
chr9	32972607	33001612	32972607	33001612	-	ENST00000309615.7@APTX	ENST00000309615.7	protein_coding	33001516,32989759,32987544,32985971,32984631,32974458,32972607	33001612,32989895,32987731,32986030,32984857,32974561,32973652	Gene ID= ENSG00000137074.18 TPM= 3.19 Transcript Type= protein_coding
chr9	32972749	33001604	32972749	33001604	-	ENST00000379819.5@APTX	ENST00000379819.5	protein_coding	33001567,32989759,32988079,32987544,32985971,32984631,32974458,32972749	33001604,32989895,32988129,32987842,32986030,32984857,32974561,32973652	Gene ID= ENSG00000137074.18 TPM= 1.06 Transcript Type= protein_coding
chr9	32973407	33025112	32973407	33025112	-	ENST00000495360.5@APTX	ENST00000495360.5	protein_coding	33024804,32989759,32988083,32987544,32985971,32984631,32974458,32973407	33025112,32989895,32988124,32987731,32986030,32984857,32974561,32973652	Gene ID= ENSG00000137074.18 TPM= 1.06 Transcript Type= nonsense_mediated_decay
chr9	33023223	33025114	33023223	33025114	-	transcript569.chr9.nnic@NA	transcript569.chr9.nnic	NA	33023223	33025114	Gene ID= novel_gene_chr9_570 TPM= 3.19 Transcript Type= NA
chr9	33025211	33039907	33025211	33039907	+	ENST00000330899.4@DNAJA1	ENST00000330899.4	protein_coding	33025211,33026475,33026813,33029885,33030440,33034216,33036574,33037015,33038685	33025383,33026616,33026990,33029989,33030667,33034330,33036689,33037115,33039907	Gene ID= ENSG00000086061.15 TPM= 202.87 Transcript Type= protein_coding
chr9	33110637	33167356	33110637	33167356	-	ENST00000379731.4@B4GALT1	ENST00000379731.4	protein_coding	33166758,33135189,33120419,33115991,33113774,33110637	33167356,33135424,33120606,33116113,33113878,33113586	Gene ID= ENSG00000086062.12 TPM= 25.49 Transcript Type= protein_coding
chr9	33119055	33120204	33119055	33120204	+	transcript576.chr9.nnic@NA	transcript576.chr9.nnic	NA	33119055	33120204	Gene ID= novel_gene_chr9_577 TPM= 2.12 Transcript Type= NA
chr9	33255025	33264729	33255025	33264729	-	transcript579.chr9.nic@BAG1	transcript579.chr9.nic	protein_coding	33264206,33262702,33261087,33258920,33256801,33255865,33255025	33264729,33262830,33261169,33259033,33256908,33255927,33255308	Gene ID= ENSG00000107262.19 TPM= 9.56 Transcript Type= NA
chr9	33264942	33281539	33264942	33281539	+	ENST00000223500.8@CHMP5	ENST00000223500.8	protein_coding	33264942,33266010,33267853,33270623,33271152,33276456,33278113,33280809	33265147,33266114,33267899,33270716,33271223,33276564,33278225,33281539	Gene ID= ENSG00000086065.13 TPM= 101.97 Transcript Type= protein_coding
chr9	33290545	33348723	33290545	33348723	+	ENST00000318524.6@NFX1	ENST00000318524.6	protein_coding	33290545,33294420,33301263,33303191,33307194,33311106,33313654,33318731,33318910,33328581,33332472,33338510,33342746,33344069,33347038,33347663	33290597,33295427,33301421,33303268,33307299,33311177,33313793,33318830,33319127,33328678,33332502,33338589,33342854,33344188,33347117,33348723	Gene ID= ENSG00000086102.18 TPM= 16.46 Transcript Type= protein_coding
chr9	33290511	33371157	33290511	33371157	+	ENST00000379540.7@NFX1	ENST00000379540.7	protein_coding	33290511,33294420,33301263,33303191,33307194,33311106,33313654,33318731,33318910,33328581,33332472,33338510,33342746,33344069,33347038,33351560,33352646,33354086,33354851,33364010,33364708,33366629,33367515,33369906	33290597,33295427,33301421,33303268,33307299,33311177,33313793,33318830,33319127,33328678,33332502,33338589,33342854,33344188,33347117,33351790,33352719,33354187,33354892,33364108,33364774,33366774,33367619,33371157	Gene ID= ENSG00000086102.18 TPM= 4.78 Transcript Type= protein_coding
chr9	33365403	33365613	33365403	33365613	+	transcript598.chr9.nnic@NA	transcript598.chr9.nnic	NA	33365403	33365613	Gene ID= novel_gene_chr9_599 TPM= 2.12 Transcript Type= NA
chr9	33384950	33402597	33384950	33402597	-	transcript606.chr9.nic@AQP7	transcript606.chr9.nic	protein_coding	33402373,33401237,33395078,33386969,33386404,33386077,33385649,33384950	33402597,33401287,33395195,33387092,33386541,33386195,33385866,33385231	Gene ID= ENSG00000165269.12 TPM= 18.06 Transcript Type= NA
chr9	33384369	33402532	33384369	33402532	-	transcript610.chr9.nic@AQP7	transcript610.chr9.nic	protein_coding	33402373,33401237,33395078,33386404,33386077,33385649,33384369	33402532,33401287,33395195,33386541,33386195,33385866,33385290	Gene ID= ENSG00000165269.12 TPM= 8.5 Transcript Type= NA
chr9	33384950	33402519	33384950	33402519	-	ENST00000297988.5@AQP7	ENST00000297988.5	protein_coding	33402373,33401237,33395078,33386969,33386404,33386077,33385649,33384950	33402519,33401287,33395195,33387092,33386541,33386195,33385866,33385290	Gene ID= ENSG00000165269.12 TPM= 26.55 Transcript Type= protein_coding
chr9	33399759	33400817	33399759	33400817	+	transcript637.chr9.nnic@NA	transcript637.chr9.nnic	NA	33399759	33400817	Gene ID= novel_gene_chr9_638 TPM= 4.25 Transcript Type= NA
chr9	33401664	33410550	33401664	33410550	+	transcript633.chr9.nnic@AL356218.1	transcript633.chr9.nnic	antisense_RNA	33401664,33409882,33410240	33402148,33409962,33410550	Gene ID= ENSG00000223678.1 TPM= 4.25 Transcript Type= NA
chr9	33441154	33447611	33441154	33447611	-	ENST00000297991.4@AQP3	ENST00000297991.4	protein_coding	33447423,33443766,33443321,33442852,33442301,33441154	33447611,33443892,33443458,33442970,33442518,33442211	Gene ID= ENSG00000165272.14 TPM= 3.19 Transcript Type= protein_coding
chr9	33461452	33473930	33461452	33473930	-	ENST00000297990.8@NOL6	ENST00000297990.8	protein_coding	33473789,33472206,33472004,33470012,33469499,33469207,33468958,33468752,33468508,33468321,33468030,33467691,33467394,33467114,33466912,33466569,33466308,33466071,33465734,33465207,33464879,33464037,33463831,33463247,33463033,33461452	33473930,33472412,33472120,33470191,33469667,33469341,33469121,33468872,33468566,33468422,33468145,33467868,33467516,33467262,33466987,33466709,33466425,33466225,33465897,33465359,33464976,33464161,33463920,33463441,33463134,33462813	Gene ID= ENSG00000165271.16 TPM= 39.3 Transcript Type= protein_coding
chr9	33675154	33677171	33675154	33677171	-	transcript649.chr9.nnic@NA	transcript649.chr9.nnic	NA	33675154	33677171	Gene ID= novel_gene_chr9_650 TPM= 8.5 Transcript Type= NA
chr9	33817306	33917987	33817306	33917987	+	transcript662.chr9.nnic@UBE2R2	transcript662.chr9.nnic	protein_coding	33817306,33900174,33911964,33917018	33817934,33900271,33912098,33917987	Gene ID= ENSG00000107341.4 TPM= 15.22 Transcript Type= NA
chr9	33843064	33844446	33843064	33844446	-	transcript665.chr9.nnic@NA	transcript665.chr9.nnic	NA	33843064	33844446	Gene ID= novel_gene_chr9_666 TPM= 2.12 Transcript Type= NA
chr9	33921693	34048901	33921693	34048901	-	ENST00000379238.5@UBAP2	ENST00000379238.5	protein_coding	34048825,34017050,33998787,33996223,33988973,33986760,33973183,33971651,33963726,33960826,33956079,33953285,33948374,33944365,33943420,33941649,33935839,33933490,33932562,33927797,33926989,33926617,33924206,33923795,33923379,33923186,33922966,33922687,33921693	34048901,34017189,33998864,33996333,33989126,33986837,33973237,33971754,33963791,33960878,33956146,33953474,33948587,33944639,33943589,33941862,33935878,33933628,33932628,33927992,33927080,33926664,33924284,33924000,33923478,33923293,33923033,33922878,33922599	Gene ID= ENSG00000137073.21 TPM= 9.56 Transcript Type= protein_coding
chr9	34086387	34126773	34086387	34126773	-	ENST00000361264.8@DCAF12	ENST00000361264.8	protein_coding	34126354,34125023,34107359,34106434,34098324,34096716,34093286,34089412,34086387	34126773,34125277,34107565,34106494,34098517,34096781,34093448,34089590,34088508	Gene ID= ENSG00000198876.12 TPM= 39.3 Transcript Type= protein_coding
chr9	34179022	34252523	34179022	34252523	+	transcript678.chr9.nnic@UBAP1	transcript678.chr9.nnic	protein_coding	34179022,34216674,34220908,34234216,34241185,34249779,34250658,34251392	34179240,34216789,34220948,34234340,34242108,34249961,34250759,34252523	Gene ID= ENSG00000165006.13 TPM= 6.9 Transcript Type= NA
chr9	34179013	34252523	34179013	34252523	+	ENST00000297661.8@UBAP1	ENST00000297661.8	protein_coding	34179013,34220908,34234216,34241185,34249779,34250658,34251392	34179240,34220948,34234340,34242108,34249961,34250759,34252523	Gene ID= ENSG00000165006.13 TPM= 53.64 Transcript Type= protein_coding
chr9	34179012	34252523	34179012	34252523	+	transcript682.chr9.nnic@UBAP1	transcript682.chr9.nnic	protein_coding	34179012,34220908,34234216,34249779,34250658,34251392	34179240,34220948,34234340,34249961,34250759,34252523	Gene ID= ENSG00000165006.13 TPM= 9.56 Transcript Type= NA
chr9	34228738	34231799	34228738	34231799	-	transcript687.chr9.nnic@NA	transcript687.chr9.nnic	NA	34228738	34231799	Gene ID= novel_gene_chr9_688 TPM= 2.12 Transcript Type= NA
chr9	34329506	34343713	34329506	34343713	+	ENST00000379158.6@NUDT2	ENST00000379158.6	protein_coding	34329506,34336229,34338713,34339024,34343124	34329599,34336341,34338847,34339166,34343713	Gene ID= ENSG00000164978.17 TPM= 4.07 Transcript Type= protein_coding
chr9	34329506	34343711	34329506	34343711	+	ENST00000618590.1@NUDT2	ENST00000618590.1	protein_coding	34329506,34339024,34343124	34329599,34339166,34343711	Gene ID= ENSG00000164978.17 TPM= 1.41 Transcript Type= protein_coding
chr9	34329506	34343711	34329506	34343711	+	ENST00000346365.8@NUDT2	ENST00000346365.8	protein_coding	34329506,34338713,34339024,34343124	34329599,34338847,34339166,34343711	Gene ID= ENSG00000164978.17 TPM= 15.75 Transcript Type= protein_coding
chr9	34366670	34376853	34366670	34376853	-	ENST00000297625.7@KIAA1161	ENST00000297625.7	protein_coding	34376793,34366670	34376853,34373006	Gene ID= ENSG00000164976.8 TPM= 14.87 Transcript Type= protein_coding
chr9	34379019	34381622	34379019	34381622	-	transcript695.chr9.nnic@C9orf24	transcript695.chr9.nnic	protein_coding	34381571,34381369,34380902,34379646,34379019	34381622,34381444,34381131,34379732,34379181	Gene ID= ENSG00000164972.12 TPM= 6.9 Transcript Type= NA
chr9	34379019	34381600	34379019	34381600	-	ENST00000379133.7@C9orf24	ENST00000379133.7	protein_coding	34381369,34380902,34379646,34379019	34381600,34381131,34379732,34379181	Gene ID= ENSG00000164972.12 TPM= 18.59 Transcript Type= protein_coding
chr9	34379019	34381560	34379019	34381560	-	ENST00000379127.1@C9orf24	ENST00000379127.1	protein_coding	34381526,34381369,34380897,34379646,34379019	34381560,34381444,34381131,34379732,34379181	Gene ID= ENSG00000164972.12 TPM= 4.25 Transcript Type= protein_coding
chr9	34379019	34379775	34379019	34379775	-	ENST00000481295.5@C9orf24	ENST00000481295.5	protein_coding	34379646,34379019	34379775,34379181	Gene ID= ENSG00000164972.12 TPM= 1.06 Transcript Type= processed_transcript
chr9	34388309	34391286	34388309	34391286	-	transcript698.chr9.nnic@NA	transcript698.chr9.nnic	NA	34388309	34391286	Gene ID= novel_gene_chr9_699 TPM= 2.12 Transcript Type= NA
chr9	34389943	34390051	34389943	34390051	-	ENST00000384305.1@Y_RNA	ENST00000384305.1	misc_RNA	34389943	34390051	Gene ID= ENSG00000207032.1 TPM= 1.06 Transcript Type= misc_RNA
chr9	34398190	34458570	34398190	34458570	-	ENST00000297620.8@FAM219A	ENST00000297620.8	protein_coding	34458204,34405916,34402705,34402387,34401666,34398190	34458570,34405964,34402807,34402467,34401720,34401122	Gene ID= ENSG00000164970.14 TPM= 77.54 Transcript Type= protein_coding
chr9	34410362	34412613	34410362	34412613	+	transcript708.chr9.nnic@NA	transcript708.chr9.nnic	NA	34410362	34412613	Gene ID= novel_gene_chr9_709 TPM= 2.12 Transcript Type= NA
chr9	34446203	34449006	34446203	34449006	+	transcript706.chr9.nnic@NA	transcript706.chr9.nnic	NA	34446203	34449006	Gene ID= novel_gene_chr9_707 TPM= 3.19 Transcript Type= NA
chr9	34521040	34523041	34521040	34523041	-	ENST00000399775.2@ENHO	ENST00000399775.2	protein_coding	34522777,34521040	34523041,34521856	Gene ID= ENSG00000168913.6 TPM= 2.12 Transcript Type= protein_coding
chr9	34610486	34612104	34610486	34612104	-	ENST00000297613.4@RPP25L	ENST00000297613.4	protein_coding	34611860,34610486	34612104,34611332	Gene ID= ENSG00000164967.9 TPM= 24.43 Transcript Type= protein_coding
chr9	34610486	34612104	34610486	34612104	-	ENST00000378959.8@RPP25L	ENST00000378959.8	protein_coding	34612064,34610486	34612104,34611332	Gene ID= ENSG00000164967.9 TPM= 52.05 Transcript Type= protein_coding
chr9	34613545	34620523	34613545	34620523	-	ENST00000378916.8@DCTN3	ENST00000378916.8	protein_coding	34620369,34618676,34617885,34614710,34614042,34613545	34620523,34618760,34617971,34614768,34614101,34613871	Gene ID= ENSG00000137100.15 TPM= 3.72 Transcript Type= protein_coding
chr9	34613551	34620480	34613551	34620480	-	ENST00000259632.11@DCTN3	ENST00000259632.11	protein_coding	34620369,34618676,34617885,34616030,34614710,34614042,34613551	34620480,34618760,34617971,34616113,34614768,34614101,34613871	Gene ID= ENSG00000137100.15 TPM= 137.55 Transcript Type= protein_coding
chr9	34613551	34620474	34613551	34620474	-	ENST00000341694.6@DCTN3	ENST00000341694.6	protein_coding	34620369,34618676,34617885,34616030,34614710,34614042,34613551	34620474,34618760,34617971,34616113,34614768,34614198,34613871	Gene ID= ENSG00000137100.15 TPM= 3.72 Transcript Type= protein_coding
chr9	34613551	34620443	34613551	34620443	-	ENST00000421919.5@DCTN3	ENST00000421919.5	protein_coding	34620369,34618676,34617885,34614710,34614042,34613551	34620443,34618760,34617971,34614768,34614101,34613871	Gene ID= ENSG00000137100.15 TPM= 1.59 Transcript Type= protein_coding
chr9	34634722	34637771	34634722	34637771	-	ENST00000277010.8@SIGMAR1	ENST00000277010.8	protein_coding	34637547,34637220,34636997,34634722	34637771,34637420,34637089,34635858	Gene ID= ENSG00000147955.16 TPM= 83.91 Transcript Type= protein_coding
chr9	34646614	34650583	34646614	34650583	+	transcript746.chr9.nnic@GALT	transcript746.chr9.nnic	protein_coding	34646614,34647089,34647492,34647657,34647832,34648115,34648334,34648762,34648998,34649422,34650369	34646786,34647258,34647567,34647705,34647961,34648171,34648456,34648894,34649081,34649564,34650583	Gene ID= ENSG00000213930.11 TPM= 74.35 Transcript Type= NA
chr9	34645849	34650583	34645849	34650583	+	transcript777.chr9.nic@GALT	transcript777.chr9.nic	protein_coding	34645849,34648334,34650369	34648171,34649564,34650583	Gene ID= ENSG00000213930.11 TPM= 3.72 Transcript Type= NA
chr9	34652182	34661887	34652182	34661887	+	transcript731.chr9.nnic@IL11RA	transcript731.chr9.nnic	protein_coding	34652182,34655218,34655605,34656739,34657035,34657303,34657421,34658520,34659759,34660274,34660504,34660854,34661482	34652233,34655317,34655665,34656908,34657149,34657335,34657587,34658695,34659900,34660393,34660600,34660936,34661887	Gene ID= ENSG00000137070.17 TPM= 11.63 Transcript Type= NA
chr9	34652129	34661887	34652129	34661887	+	transcript739.chr9.nic@IL11RA	transcript739.chr9.nic	protein_coding	34652129,34655218,34655605,34657035,34657303,34657421,34658520,34659759,34660274,34660504,34660854,34661482	34652233,34655317,34655665,34657149,34657335,34657587,34658683,34659900,34660393,34660600,34660936,34661887	Gene ID= ENSG00000137070.17 TPM= 9.28 Transcript Type= NA
chr9	34652188	34661893	34652188	34661893	+	transcript764.chr9.nic@IL11RA	transcript764.chr9.nic	protein_coding	34652188,34655218,34655605,34657303,34657421,34658520,34659759,34660274,34660504	34652233,34655317,34657149,34657335,34657587,34658683,34659900,34660393,34661893	Gene ID= ENSG00000137070.17 TPM= 3.19 Transcript Type= NA
chr9	34652162	34661887	34652162	34661887	+	ENST00000555247.5@IL11RA	ENST00000555247.5	protein_coding	34652162,34655218,34656739,34657035,34657303,34657421,34658520,34659759,34660274,34660504,34660854,34661482	34652233,34655317,34656908,34657149,34657335,34657587,34658683,34659900,34660393,34660600,34660936,34661887	Gene ID= ENSG00000137070.17 TPM= 6.63 Transcript Type= nonsense_mediated_decay
chr9	34652192	34661887	34652192	34661887	+	ENST00000441545.6@IL11RA	ENST00000441545.6	protein_coding	34652192,34655218,34655605,34656739,34657035,34657303,34657421,34658520,34659759,34660274,34660504,34660854,34661482	34652233,34655317,34655665,34656908,34657149,34657335,34657587,34658683,34659900,34660393,34660600,34660936,34661887	Gene ID= ENSG00000137070.17 TPM= 83.1 Transcript Type= protein_coding
chr9	34653935	34661892	34653935	34661892	+	ENST00000318041.13@IL11RA	ENST00000318041.13	protein_coding	34653935,34655218,34655605,34656739,34657035,34657303,34657421,34658520,34659759,34660274,34660504,34660854,34661482	34653999,34655317,34655665,34656908,34657149,34657335,34657587,34658683,34659900,34660393,34660600,34660936,34661892	Gene ID= ENSG00000137070.17 TPM= 9.69 Transcript Type= protein_coding
chr9	34664163	34666049	34664163	34666049	-	ENST00000421828.6@AL162231.1	ENST00000421828.6	protein_coding	34665613,34665314,34664163	34666049,34665373,34665190	Gene ID= ENSG00000187186.14 TPM= 3.19 Transcript Type= protein_coding
chr9	34665032	34666028	34665032	34666028	-	ENST00000544078.2@AL162231.1	ENST00000544078.2	protein_coding	34665978,34665613,34665314,34665032	34666028,34665680,34665373,34665190	Gene ID= ENSG00000187186.14 TPM= 16.99 Transcript Type= protein_coding
chr9	34665028	34666028	34665028	34666028	-	ENST00000416454.5@AL162231.1	ENST00000416454.5	protein_coding	34665978,34665613,34665028	34666028,34665680,34665373	Gene ID= ENSG00000187186.14 TPM= 4.25 Transcript Type= protein_coding
chr9	34709005	34710124	34709005	34710124	-	ENST00000259607.6@CCL21	ENST00000259607.6	protein_coding	34710000,34709777,34709500,34709005	34710124,34709897,34709682,34709427	Gene ID= ENSG00000137077.7 TPM= 15.93 Transcript Type= protein_coding
chr9	34989694	34998431	34989694	34998431	+	ENST00000312316.9@DNAJB5	ENST00000312316.9	protein_coding	34989694,34993200,34996265,34997026	34989831,34993444,34996866,34998431	Gene ID= ENSG00000137094.14 TPM= 76.03 Transcript Type= protein_coding
chr9	34990250	34998433	34990250	34998433	+	ENST00000454002.6@DNAJB5	ENST00000454002.6	protein_coding	34990250,34993200,34996265,34997026	34990812,34993444,34996866,34998433	Gene ID= ENSG00000137094.14 TPM= 31.42 Transcript Type= protein_coding
chr9	34992856	34997379	34992856	34997379	+	transcript793.chr9.nic@DNAJB5	transcript793.chr9.nic	protein_coding	34992856,34993200,34996265,34997026	34992986,34993444,34996866,34997379	Gene ID= ENSG00000137094.14 TPM= 4.51 Transcript Type= NA
chr9	34990222	34998428	34990222	34998428	+	ENST00000541010.5@DNAJB5	ENST00000541010.5	protein_coding	34990222,34996265,34997026	34993444,34996866,34998428	Gene ID= ENSG00000137094.14 TPM= 8.05 Transcript Type= retained_intron
chr9	34998811	35001566	34998811	35001566	-	transcript796.chr9.nnic@NA	transcript796.chr9.nnic	NA	34998811	35001566	Gene ID= novel_gene_chr9_797 TPM= 13.81 Transcript Type= NA
chr9	35042667	35046745	35042667	35046745	+	transcript817.chr9.nnic@NA	transcript817.chr9.nnic	NA	35042667	35046745	Gene ID= novel_gene_chr9_818 TPM= 4.25 Transcript Type= NA
chr9	35056064	35073249	35056064	35073249	-	ENST00000358901.10@VCP	ENST00000358901.10	protein_coding	35072337,35068251,35067891,35066675,35065251,35064154,35062978,35062217,35062003,35061577,35061015,35060801,35060313,35059493,35059064,35057376,35056064	35073249,35068362,35068063,35066817,35065381,35064285,35063080,35062350,35062138,35061689,35061179,35060923,35060525,35059801,35059219,35057530,35057222	Gene ID= ENSG00000165280.15 TPM= 44.96 Transcript Type= protein_coding
chr9	35073838	35080016	35073838	35080016	-	ENST00000378643.7@FANCG	ENST00000378643.7	protein_coding	35079441,35079151,35078605,35078141,35077264,35076971,35076724,35076432,35075962,35075465,35075279,35074927,35074371,35073838	35080016,35079241,35078736,35078343,35077399,35077101,35076870,35076583,35076028,35075754,35075325,35075082,35074494,35074216	Gene ID= ENSG00000221829.9 TPM= 5.31 Transcript Type= protein_coding
chr9	35088689	35096601	35088689	35096601	-	ENST00000361778.6@PIGO	ENST00000361778.6	protein_coding	35096561,35095055,35094216,35093901,35093421,35093030,35092543,35091240,35090466,35090066,35089380,35088689	35096601,35095566,35094359,35094024,35093580,35093209,35092767,35091291,35090672,35090280,35089450,35089221	Gene ID= ENSG00000165282.13 TPM= 13.81 Transcript Type= protein_coding
chr9	35088691	35096591	35088691	35096591	-	transcript824.chr9.nic@PIGO	transcript824.chr9.nic	protein_coding	35096561,35095055,35094216,35093901,35093421,35093030,35091240,35090466,35090066,35089380,35088691	35096591,35095566,35094359,35094024,35093580,35093209,35092767,35090672,35090280,35089450,35089221	Gene ID= ENSG00000165282.13 TPM= 9.56 Transcript Type= NA
chr9	35099896	35103196	35099896	35103196	-	transcript830.chr9.nnic@STOML2	transcript830.chr9.nnic	protein_coding	35103161,35102686,35102095,35101904,35101710,35101426,35101135,35100932,35100598,35099896	35103196,35102823,35102194,35101962,35101811,35101560,35101279,35101011,35100726,35100172	Gene ID= ENSG00000165283.15 TPM= 5.31 Transcript Type= NA
chr9	35099776	35103195	35099776	35103195	-	ENST00000619795.4@STOML2	ENST00000619795.4	protein_coding	35103050,35102095,35101904,35101710,35101426,35101135,35100932,35100598,35099776	35103195,35102194,35101962,35101811,35101560,35101279,35101011,35100726,35100172	Gene ID= ENSG00000165283.15 TPM= 4.25 Transcript Type= protein_coding
chr9	35099891	35103157	35099891	35103157	-	ENST00000356493.9@STOML2	ENST00000356493.9	protein_coding	35103050,35102686,35102095,35101904,35101710,35101426,35101135,35100932,35100598,35099891	35103157,35102823,35102194,35101962,35101811,35101560,35101279,35101011,35100726,35100172	Gene ID= ENSG00000165283.15 TPM= 205 Transcript Type= protein_coding
chr9	35104121	35111588	35104121	35111588	-	ENST00000603301.5@FAM214B	ENST00000603301.5	protein_coding	35111269,35108594,35107381,35106833,35106538,35106252,35105941,35105682,35104121	35111588,35108737,35108349,35106891,35106643,35106410,35106009,35105857,35105374	Gene ID= ENSG00000005238.19 TPM= 14.87 Transcript Type= protein_coding
chr9	35104121	35115881	35104121	35115881	-	transcript837.chr9.nic@FAM214B	transcript837.chr9.nic	protein_coding	35115671,35108594,35107381,35106833,35106538,35106252,35105941,35105682,35104121	35115881,35108737,35108349,35106891,35106643,35106410,35106009,35105857,35105374	Gene ID= ENSG00000005238.19 TPM= 13.81 Transcript Type= NA
chr9	35104121	35116096	35104121	35116096	-	transcript838.chr9.nnic@FAM214B	transcript838.chr9.nnic	protein_coding	35116050,35108594,35107381,35106833,35106538,35106252,35105941,35105682,35104121	35116096,35108737,35108349,35106891,35106643,35106410,35106009,35105857,35105374	Gene ID= ENSG00000005238.19 TPM= 13.81 Transcript Type= NA
chr9	35490127	35561892	35490127	35561892	+	ENST00000361226.7@RUSC2	ENST00000361226.7	protein_coding	35490127,35546430,35555060,35555952,35556308,35557914,35558197,35558462,35559226,35560029,35560960,35561181	35490172,35548535,35555701,35556137,35556448,35557990,35558371,35558567,35559272,35560851,35561097,35561892	Gene ID= ENSG00000198853.11 TPM= 60.54 Transcript Type= protein_coding
chr9	35544309	35547402	35544309	35547402	-	transcript847.chr9.nnic@NA	transcript847.chr9.nnic	NA	35544309	35547402	Gene ID= novel_gene_chr9_848 TPM= 3.19 Transcript Type= NA
chr9	35605247	35610031	35605247	35610031	+	transcript850.chr9.nnic@TESK1	transcript850.chr9.nnic	protein_coding	35605247,35605474,35605984,35606237,35606837,35607327,35607582,35607928,35608160,35608395,35609107	35605425,35605838,35606105,35606285,35606983,35607409,35607672,35608011,35608249,35608509,35610031	Gene ID= ENSG00000107140.15 TPM= 9.56 Transcript Type= NA
chr9	35605305	35610032	35605305	35610032	+	ENST00000620767.4@TESK1	ENST00000620767.4	protein_coding	35605305,35605474,35605984,35606237,35606837,35607327,35607582,35607928,35608160,35608395,35608862	35605425,35605838,35606105,35606285,35606983,35607409,35607672,35608011,35608249,35608509,35610032	Gene ID= ENSG00000107140.15 TPM= 27.09 Transcript Type= protein_coding
chr9	35605370	35610032	35605370	35610032	+	ENST00000336395.5@TESK1	ENST00000336395.5	protein_coding	35605370,35605984,35606237,35606837,35607327,35607582,35607928,35608160,35608395,35608862	35605838,35606105,35606285,35606983,35607409,35607672,35608011,35608249,35608509,35610032	Gene ID= ENSG00000107140.15 TPM= 27.09 Transcript Type= protein_coding
chr9	35658314	35661187	35658314	35661187	+	ENST00000378406.5@CCDC107	ENST00000378406.5	protein_coding	35658314,35658576,35660401,35660557	35658485,35658727,35660461,35661187	Gene ID= ENSG00000159884.11 TPM= 15.22 Transcript Type= protein_coding
chr9	35658317	35661177	35658317	35661177	+	ENST00000327351.6@CCDC107	ENST00000327351.6	protein_coding	35658317,35658576,35660401,35660557,35660766,35660940	35658485,35658727,35660461,35660647,35660858,35661177	Gene ID= ENSG00000159884.11 TPM= 36.46 Transcript Type= protein_coding
chr9	35658304	35661186	35658304	35661186	+	ENST00000378407.7@CCDC107	ENST00000378407.7	protein_coding	35658304,35658576,35660401,35660557,35660774	35658485,35658727,35660461,35660647,35661186	Gene ID= ENSG00000159884.11 TPM= 14.16 Transcript Type= protein_coding
chr9	35682008	35691121	35682008	35691121	-	transcript867.chr9.nnic@TPM2	transcript867.chr9.nnic	protein_coding	35689704,35689146,35685647,35685434,35685269,35685064,35684732,35684488,35684246,35682524,35682008	35691121,35689271,35685780,35685551,35685339,35685139,35684807,35684550,35684315,35683241,35682163	Gene ID= ENSG00000198467.13 TPM= 38.45 Transcript Type= NA
chr9	35682008	35690669	35682008	35690669	-	transcript868.chr9.nnic@TPM2	transcript868.chr9.nnic	protein_coding	35689704,35689146,35685647,35685434,35685269,35684732,35684488,35684246,35682524,35682008	35690669,35689271,35685780,35685551,35685339,35684807,35684550,35684315,35683241,35682163	Gene ID= ENSG00000198467.13 TPM= 40.76 Transcript Type= NA
chr9	35682008	35690222	35682008	35690222	-	transcript869.chr9.nnic@TPM2	transcript869.chr9.nnic	protein_coding	35689704,35689146,35685647,35685434,35685269,35685064,35684488,35684246,35682524,35682008	35690222,35689271,35685780,35685551,35685339,35685139,35684550,35684315,35683241,35682163	Gene ID= ENSG00000198467.13 TPM= 28.71 Transcript Type= NA
chr9	35682014	35689969	35682014	35689969	-	transcript877.chr9.nic@TPM2	transcript877.chr9.nic	protein_coding	35689704,35689146,35685647,35685434,35685269,35685064,35684488,35684246,35682014	35689969,35689271,35685780,35685551,35685339,35685139,35684550,35684315,35683241	Gene ID= ENSG00000198467.13 TPM= 34.91 Transcript Type= NA
chr9	35682930	35689922	35682930	35689922	-	ENST00000360958.6@TPM2	ENST00000360958.6	protein_coding	35689704,35689146,35685647,35685434,35685269,35684732,35684488,35684246,35682930	35689922,35689271,35685780,35685551,35685339,35684807,35684550,35684315,35683241	Gene ID= ENSG00000198467.13 TPM= 129.58 Transcript Type= protein_coding
chr9	35696948	35732395	35696948	35732395	-	ENST00000314888.9@TLN1	ENST00000314888.9	protein_coding	35732075,35725565,35725224,35724830,35724572,35724192,35723952,35722861,35722119,35721648,35720812,35720433,35720039,35719740,35719519,35719074,35718812,35717619,35717146,35716390,35715059,35714760,35714574,35714239,35713953,35713196,35712835,35712005,35711595,35711255,35710989,35710797,35710561,35708341,35707731,35707348,35707072,35706768,35706450,35706196,35705962,35705750,35705551,35704669,35704332,35703991,35703775,35703560,35700191,35699974,35699356,35699032,35698808,35698617,35698323,35698044,35696948	35732395,35725727,35725321,35724959,35724724,35724334,35724079,35722921,35722223,35721803,35720913,35720509,35720219,35719853,35719627,35719282,35718910,35717786,35717440,35716556,35715187,35714876,35714687,35714373,35714081,35713298,35713043,35712124,35711792,35711394,35711082,35710886,35710683,35708484,35707892,35707488,35707253,35706900,35706551,35706366,35706111,35705851,35705670,35704815,35704498,35704174,35703900,35703676,35700376,35700081,35699461,35699156,35698933,35698679,35698505,35698172,35697916	Gene ID= ENSG00000137076.20 TPM= 181.98 Transcript Type= protein_coding
chr9	35732335	35737004	35732335	35737004	+	ENST00000353704.2@CREB3	ENST00000353704.2	protein_coding	35732335,35732996,35733215,35733396,35735109,35735306,35736048,35736227,35736392	35732901,35733143,35733282,35733485,35735215,35735374,35736132,35736311,35737004	Gene ID= ENSG00000107175.11 TPM= 10.62 Transcript Type= protein_coding
chr9	35736866	35749256	35736866	35749256	-	transcript901.chr9.nnic@GBA2	transcript901.chr9.nnic	protein_coding	35748346,35744615,35744297,35740825,35740526,35740209,35739998,35739628,35739315,35739002,35738752,35738526,35738232,35738037,35737748,35736866	35749256,35744706,35744412,35741064,35740628,35740362,35740123,35739800,35739419,35739109,35738903,35738632,35738374,35738152,35737939,35737447	Gene ID= ENSG00000070610.14 TPM= 7.08 Transcript Type= NA
chr9	35736866	35749256	35736866	35749256	-	transcript902.chr9.nic@GBA2	transcript902.chr9.nic	protein_coding	35748346,35744615,35744297,35741672,35740825,35740209,35739998,35739628,35739315,35739002,35738752,35738526,35738232,35738037,35737748,35736866	35749256,35744706,35744412,35741890,35741064,35740628,35740123,35739800,35739419,35739109,35738903,35738632,35738374,35738152,35737939,35737447	Gene ID= ENSG00000070610.14 TPM= 6.82 Transcript Type= NA
chr9	35736866	35749228	35736866	35749228	-	ENST00000378103.7@GBA2	ENST00000378103.7	protein_coding	35748346,35744615,35744297,35741672,35740825,35740526,35740209,35739998,35739628,35739315,35739002,35738752,35738526,35738232,35738037,35737748,35736866	35749228,35744706,35744412,35741890,35741064,35740628,35740362,35740123,35739800,35739419,35739109,35738903,35738632,35738374,35738152,35737939,35737447	Gene ID= ENSG00000070610.14 TPM= 108.79 Transcript Type= protein_coding
chr9	35736867	35749218	35736867	35749218	-	ENST00000378094.4@GBA2	ENST00000378094.4	protein_coding	35748346,35744615,35744297,35741672,35740825,35740526,35740209,35739998,35739628,35739315,35739002,35738752,35738526,35738232,35738037,35737748,35736867	35749218,35744706,35744412,35741890,35741064,35740628,35740362,35740123,35739800,35739419,35739109,35738903,35738632,35738374,35738152,35737939,35737604	Gene ID= ENSG00000070610.14 TPM= 3.63 Transcript Type= protein_coding
chr9	35749287	35758575	35749287	35758575	+	ENST00000378078.4@RGP1	ENST00000378078.4	protein_coding	35749287,35749737,35750243,35750658,35750840,35751266,35751627,35751956,35752651	35749408,35749871,35750379,35750741,35750989,35751412,35751754,35752145,35758575	Gene ID= ENSG00000107185.9 TPM= 18.06 Transcript Type= protein_coding
chr9	35760001	35762850	35760001	35762850	+	transcript951.chr9.nnic@NA	transcript951.chr9.nnic	NA	35760001	35762850	Gene ID= novel_gene_chr9_952 TPM= 2.12 Transcript Type= NA
chr9	35792414	35809719	35792414	35809719	+	transcript954.chr9.nnic@NPR2	transcript954.chr9.nnic	protein_coding	35792414,35793898,35799618,35800022,35800389,35800709,35801070,35801532,35801926,35802206,35802503,35805511,35805830,35806065,35806392,35807023,35807330,35808509,35808755,35809156,35809380,35809586	35793075,35794103,35799731,35800157,35800483,35800841,35801154,35801763,35802000,35802283,35802607,35805670,35805985,35806233,35806538,35807146,35807398,35808683,35808853,35809247,35809528,35809719	Gene ID= ENSG00000159899.14 TPM= 3.19 Transcript Type= NA
chr9	35812960	35815021	35812960	35815021	-	ENST00000259667.5@HINT2	ENST00000259667.5	protein_coding	35814899,35813644,35813445,35813266,35812960	35815021,35813784,35813549,35813338,35813145	Gene ID= ENSG00000137133.10 TPM= 68.33 Transcript Type= protein_coding
chr9	35812974	35815021	35812974	35815021	-	ENST00000461169.1@HINT2	ENST00000461169.1	protein_coding	35814899,35813644,35813445,35812974	35815021,35813784,35813549,35813338	Gene ID= ENSG00000137133.10 TPM= 5.66 Transcript Type= processed_transcript
chr9	35812960	35814992	35812960	35814992	-	ENST00000472085.5@HINT2	ENST00000472085.5	protein_coding	35814899,35813644,35813445,35813266,35812960	35814992,35813784,35813519,35813338,35813145	Gene ID= ENSG00000137133.10 TPM= 1.41 Transcript Type= processed_transcript
chr9	35812960	35815526	35812960	35815526	-	transcript964.chr9.nnic@NA	transcript964.chr9.nnic	NA	35812960	35815526	Gene ID= novel_gene_chr9_965 TPM= 2.12 Transcript Type= NA
chr9	35910076	35911613	35910076	35911613	+	ENST00000636776.1@SPAAR	ENST00000636776.1	protein_coding	35910076	35911613	Gene ID= ENSG00000235387.2 TPM= 3.19 Transcript Type= protein_coding
chr9	36036433	36124451	36036433	36124451	+	ENST00000377966.3@RECK	ENST00000377966.3	protein_coding	36036433,36052265,36058827,36060119,36063795,36065577,36080605,36083365,36087694,36091164,36100331,36102094,36105143,36107976,36109957,36112305,36116985,36118757,36120663,36121533,36122824	36037098,36052323,36058901,36060155,36063880,36065624,36080638,36083562,36087961,36091343,36100543,36102230,36105283,36108164,36110079,36112476,36117177,36118967,36120736,36121688,36124451	Gene ID= ENSG00000122707.11 TPM= 2.12 Transcript Type= protein_coding
chr9	36136745	36163913	36136745	36163913	+	ENST00000377960.8@GLIPR2	ENST00000377960.8	protein_coding	36136745,36147786,36148547,36150872,36162362	36136791,36147894,36148650,36150949,36163913	Gene ID= ENSG00000122694.15 TPM= 9.56 Transcript Type= protein_coding
chr9	36190856	36212061	36190856	36212061	+	ENST00000433436.6@CLTA	ENST00000433436.6	protein_coding	36190856,36197551,36198979,36204068,36209267,36210625,36211604	36191273,36197588,36199096,36204179,36209320,36210661,36212061	Gene ID= ENSG00000122705.16 TPM= 1.91 Transcript Type= protein_coding
chr9	36190856	36212061	36190856	36212061	+	ENST00000538225.5@CLTA	ENST00000538225.5	protein_coding	36190856,36197551,36198979,36204068,36210625,36211604	36191273,36197588,36199096,36204179,36210661,36212061	Gene ID= ENSG00000122705.16 TPM= 11.47 Transcript Type= protein_coding
chr9	36190923	36212056	36190923	36212056	+	ENST00000345519.9@CLTA	ENST00000345519.9	protein_coding	36190923,36197551,36198979,36204068,36211603	36191273,36197588,36199096,36204179,36212056	Gene ID= ENSG00000122705.16 TPM= 61.39 Transcript Type= protein_coding
chr9	36190932	36212058	36190932	36212058	+	ENST00000470744.5@CLTA	ENST00000470744.5	protein_coding	36190932,36197551,36198979,36204068,36210625,36211603	36191273,36197588,36199096,36204179,36210660,36212058	Gene ID= ENSG00000122705.16 TPM= 11.47 Transcript Type= protein_coding
chr9	36190937	36212059	36190937	36212059	+	ENST00000242285.10@CLTA	ENST00000242285.10	protein_coding	36190937,36197551,36198979,36204068,36209267,36210625,36211603	36191273,36197588,36199096,36204179,36209320,36210660,36212059	Gene ID= ENSG00000122705.16 TPM= 1.91 Transcript Type= protein_coding
chr9	36336396	36400866	36336396	36400866	-	transcript990.chr9.nnic@RNF38	transcript990.chr9.nnic	protein_coding	36400554,36390569,36375934,36369719,36357775,36356303,36353170,36352742,36351115,36344832,36342325,36336396	36400866,36390616,36376127,36369932,36357942,36356473,36353331,36352848,36351199,36344953,36342424,36339814	Gene ID= ENSG00000137075.17 TPM= 11.68 Transcript Type= NA
chr9	37079857	37090507	37079857	37090507	+	ENST00000625445.1@EBLN3P	ENST00000625445.1	lincRNA	37079857,37086668	37080536,37090507	Gene ID= ENSG00000281649.1 TPM= 13.81 Transcript Type= lincRNA
chr9	37120539	37358149	37120539	37358149	+	ENST00000336755.9@ZCCHC7	ENST00000336755.9	protein_coding	37120539,37126312,37302188,37304188,37305544,37327799,37349357,37354710,37356835	37120623,37126942,37302231,37304313,37305714,37327834,37349452,37354824,37358149	Gene ID= ENSG00000147905.17 TPM= 3.19 Transcript Type= protein_coding
chr9	37422666	37436990	37422666	37436990	+	ENST00000318158.10@GRHPR	ENST00000318158.10	protein_coding	37422666,37424845,37425922,37426538,37428484,37429732,37430511,37432008,37436661	37422833,37424975,37425994,37426654,37428572,37429836,37430646,37432138,37436990	Gene ID= ENSG00000137106.17 TPM= 198.62 Transcript Type= protein_coding
chr9	37438114	37465399	37438114	37465399	-	ENST00000307750.4@ZBTB5	ENST00000307750.4	protein_coding	37465215,37438114	37465399,37442555	Gene ID= ENSG00000168795.4 TPM= 2.12 Transcript Type= protein_coding
chr9	37485935	37503697	37485935	37503697	+	ENST00000377798.8@POLR1E	ENST00000377798.8	protein_coding	37485935,37486703,37487863,37489315,37492657,37493559,37495169,37495890,37498091,37500840,37501713,37503043	37486123,37486806,37487939,37489400,37492715,37493703,37495276,37495986,37498224,37500921,37501844,37503697	Gene ID= ENSG00000137054.15 TPM= 20.18 Transcript Type= protein_coding
chr9	37507477	37510380	37507477	37510380	+	transcript1026.chr9.nnic@NA	transcript1026.chr9.nnic	NA	37507477	37510380	Gene ID= novel_gene_chr9_1027 TPM= 3.19 Transcript Type= NA
chr9	37510892	37576253	37510892	37576253	-	ENST00000432825.6@FBXO10	ENST00000432825.6	protein_coding	37576211,37541184,37537110,37531909,37529124,37525102,37522825,37521569,37518125,37515904,37510892	37576253,37541774,37537943,37532058,37529260,37525172,37522977,37521838,37518438,37516085,37512721	Gene ID= ENSG00000147912.12 TPM= 4.25 Transcript Type= protein_coding
chr9	37588413	37592597	37588413	37592597	-	ENST00000377773.9@TOMM5	ENST00000377773.9	protein_coding	37592310,37588413	37592597,37588932	Gene ID= ENSG00000175768.12 TPM= 1.06 Transcript Type= protein_coding
chr9	37588413	37592642	37588413	37592642	-	ENST00000321301.6@TOMM5	ENST00000321301.6	protein_coding	37592412,37588413	37592642,37588932	Gene ID= ENSG00000175768.12 TPM= 52.05 Transcript Type= protein_coding
chr9	37588458	37592604	37588458	37592604	-	ENST00000401811.3@TOMM5	ENST00000401811.3	protein_coding	37592291,37588458	37592604,37588932	Gene ID= ENSG00000175768.12 TPM= 1.06 Transcript Type= protein_coding
chr9	37753803	37778965	37753803	37778965	+	ENST00000537911.5@TRMT10B	ENST00000537911.5	protein_coding	37753803,37761903,37762577,37763629,37769941,37770672,37776282,37777628	37753852,37762117,37762685,37763753,37770019,37770739,37776405,37778965	Gene ID= ENSG00000165275.9 TPM= 3.19 Transcript Type= protein_coding
chr9	37753817	37778022	37753817	37778022	+	ENST00000488673.6@TRMT10B	ENST00000488673.6	protein_coding	37753817,37761903,37762577,37763629,37768076,37769941,37770672,37776282,37777601	37753852,37762117,37762685,37763865,37768228,37770019,37770739,37776405,37778022	Gene ID= ENSG00000165275.9 TPM= 1.06 Transcript Type= nonsense_mediated_decay
chr9	37775046	37777230	37775046	37777230	+	transcript1043.chr9.nnic@NA	transcript1043.chr9.nnic	NA	37775046	37777230	Gene ID= novel_gene_chr9_1044 TPM= 19.12 Transcript Type= NA
chr9	37800502	37863325	37800502	37863325	+	ENST00000377724.7@DCAF10	ENST00000377724.7	protein_coding	37800502,37819288,37842089,37854780,37857241,37860048,37861140	37801405,37819401,37842286,37854982,37857351,37860193,37863325	Gene ID= ENSG00000122741.15 TPM= 7.44 Transcript Type= protein_coding
chr9	37800767	37863325	37800767	37863325	+	transcript1061.chr9.nic@DCAF10	transcript1061.chr9.nic	protein_coding	37800767,37819288,37842089,37854780,37860048,37861140	37801405,37819401,37842286,37854982,37860193,37863325	Gene ID= ENSG00000122741.15 TPM= 2.12 Transcript Type= NA
chr9	37800767	37863325	37800767	37863325	+	transcript1063.chr9.nic@DCAF10	transcript1063.chr9.nic	protein_coding	37800767,37819288,37854780,37857241,37860048,37861140	37801405,37819401,37854982,37857351,37860193,37863325	Gene ID= ENSG00000122741.15 TPM= 7.44 Transcript Type= NA
chr9	37800767	37861959	37800767	37861959	+	transcript1064.chr9.nnic@DCAF10	transcript1064.chr9.nnic	protein_coding	37800767,37819288,37854780,37857241,37860048,37861140	37801405,37819401,37854982,37857351,37860360,37861959	Gene ID= ENSG00000122741.15 TPM= 2.12 Transcript Type= NA
chr9	37800767	37863325	37800767	37863325	+	transcript1069.chr9.nic@DCAF10	transcript1069.chr9.nic	protein_coding	37800767,37819288,37854780,37860048,37861140	37801405,37819401,37854982,37860193,37863325	Gene ID= ENSG00000122741.15 TPM= 3.19 Transcript Type= NA
chr9	37879400	37904193	37879400	37904193	-	transcript1071.chr9.nnic@SLC25A51	transcript1071.chr9.nnic	protein_coding	37904068,37903531,37899829,37881518,37879400	37904193,37903557,37899950,37881631,37880748	Gene ID= ENSG00000122696.13 TPM= 2.66 Transcript Type= NA
chr9	37858422	37904356	37858422	37904356	-	transcript1074.chr9.nnic@SLC25A51	transcript1074.chr9.nnic	protein_coding	37904068,37899829,37881518,37858422	37904356,37899950,37881631,37860490	Gene ID= ENSG00000122696.13 TPM= 3.72 Transcript Type= NA
chr9	37879400	37904353	37879400	37904353	-	ENST00000496760.5@SLC25A51	ENST00000496760.5	protein_coding	37904068,37899829,37881518,37879400	37904353,37899950,37881631,37880748	Gene ID= ENSG00000122696.13 TPM= 14.87 Transcript Type= processed_transcript
chr9	37883685	37885366	37883685	37885366	+	transcript1087.chr9.nnic@NA	transcript1087.chr9.nnic	NA	37883685	37885366	Gene ID= novel_gene_chr9_1088 TPM= 62.67 Transcript Type= NA
chr9	37886221	37887587	37886221	37887587	+	transcript1089.chr9.nnic@NA	transcript1089.chr9.nnic	NA	37886221	37887587	Gene ID= novel_gene_chr9_1090 TPM= 3.19 Transcript Type= NA
chr9	37904189	37905649	37904189	37905649	+	transcript1091.chr9.nnic@NA	transcript1091.chr9.nnic	NA	37904189	37905649	Gene ID= novel_gene_chr9_1092 TPM= 7.44 Transcript Type= NA
chr9	37915897	37919488	37915897	37919488	-	transcript1093.chr9.nnic@NA	transcript1093.chr9.nnic	NA	37915897	37919488	Gene ID= novel_gene_chr9_1094 TPM= 8.5 Transcript Type= NA
chr9	37919134	38069211	37919134	38069211	-	ENST00000377707.3@SHB	ENST00000377707.3	protein_coding	38067929,38016011,37974622,37955883,37948635,37919134	38069211,38016131,37974837,37956054,37948754,37920004	Gene ID= ENSG00000107338.9 TPM= 14.87 Transcript Type= protein_coding
chr9	38064094	38068028	38064094	38068028	-	transcript1095.chr9.nnic@NA	transcript1095.chr9.nnic	NA	38064094	38068028	Gene ID= novel_gene_chr9_1096 TPM= 4.25 Transcript Type= NA
chr9	38311027	38313139	38311027	38313139	+	transcript1099.chr9.nnic@NA	transcript1099.chr9.nnic	NA	38311027	38313139	Gene ID= novel_gene_chr9_1100 TPM= 2.12 Transcript Type= NA
chr9	38392664	38398661	38392664	38398661	+	ENST00000377698.3@ALDH1B1	ENST00000377698.3	protein_coding	38392664,38395740	38392807,38398661	Gene ID= ENSG00000137124.7 TPM= 37.18 Transcript Type= protein_coding
chr9	38620719	38623282	38620719	38623282	+	transcript1108.chr9.nnic@NA	transcript1108.chr9.nnic	NA	38620719	38623282	Gene ID= novel_gene_chr9_1109 TPM= 2.12 Transcript Type= NA
chr9	38949716	38968378	38949716	38968378	+	transcript1116.chr9.nnic@NA	transcript1116.chr9.nnic	NA	38949716,38950329,38964940,38967972	38949849,38950512,38965093,38968378	Gene ID= novel_gene_chr9_1117 TPM= 3.19 Transcript Type= NA
chr9	38949716	38998503	38949716	38998503	+	transcript1118.chr9.nnic@NA	transcript1118.chr9.nnic	NA	38949716,38950329,38964940,38997943	38949849,38950512,38965093,38998503	Gene ID= novel_gene_chr9_1117 TPM= 3.19 Transcript Type= NA
chr9	39803496	39810098	39803496	39810098	-	transcript1126.chr9.nnic@GLIDR	transcript1126.chr9.nnic	lincRNA	39809731,39809486,39803496	39810098,39809615,39803859	Gene ID= ENSG00000278175.3 TPM= 5.31 Transcript Type= NA
chr9	39816599	39874198	39816599	39874198	-	transcript1124.chr9.nnic@BX664615.2	transcript1124.chr9.nnic	processed_transcript	39873910,39863833,39818821,39816599	39874198,39863942,39818924,39817729	Gene ID= ENSG00000283886.1 TPM= 3.19 Transcript Type= NA
chr9	39816599	39874562	39816599	39874562	-	ENST00000639056.1@BX664615.2	ENST00000639056.1	processed_transcript	39873910,39818821,39816599	39874562,39818924,39817729	Gene ID= ENSG00000283886.1 TPM= 3.19 Transcript Type= processed_transcript
chr9	40997089	41002454	40997089	41002454	-	transcript1163.chr9.nnic@NA	transcript1163.chr9.nnic	NA	40997089	41002454	Gene ID= novel_gene_chr9_1164 TPM= 3.19 Transcript Type= NA
chr9	41015638	41022327	41015638	41022327	+	transcript1161.chr9.nnic@NA	transcript1161.chr9.nnic	NA	41015638	41022327	Gene ID= novel_gene_chr9_1162 TPM= 3.19 Transcript Type= NA
chr9	41048327	41051800	41048327	41051800	-	transcript1165.chr9.nnic@NA	transcript1165.chr9.nnic	NA	41048327	41051800	Gene ID= novel_gene_chr9_1166 TPM= 2.12 Transcript Type= NA
chr9	41357132	41358783	41357132	41358783	-	transcript1172.chr9.nnic@NA	transcript1172.chr9.nnic	NA	41357132	41358783	Gene ID= novel_gene_chr9_1173 TPM= 8.5 Transcript Type= NA
chr9	41358882	41481607	41358882	41481607	+	transcript1171.chr9.nnic@AL354718.1	transcript1171.chr9.nnic	processed_pseudogene	41358882,41474878,41479945	41359152,41475053,41481607	Gene ID= ENSG00000275160.1 TPM= 6.37 Transcript Type= NA
chr9	62868139	62897777	62868139	62897777	-	ENST00000585533.1@AL512625.3	ENST00000585533.1	lincRNA	62897529,62869190,62868139	62897777,62869304,62868233	Gene ID= ENSG00000234665.8 TPM= 5.31 Transcript Type= lincRNA
chr9	63299295	63334428	63299295	63334428	-	transcript1190.chr9.nnic@AQP7P1	transcript1190.chr9.nnic	unprocessed_pseudogene	63334212,63333066,63309142,63299295	63334428,63333116,63309312,63299534	Gene ID= ENSG00000186466.5 TPM= 4.25 Transcript Type= NA
chr9	63299299	63334367	63299299	63334367	-	transcript1191.chr9.nnic@AQP7P1	transcript1191.chr9.nnic	unprocessed_pseudogene	63334212,63333066,63309142,63299299	63334367,63333116,63309312,63299620	Gene ID= ENSG00000186466.5 TPM= 5.31 Transcript Type= NA
chr9	63324279	63328126	63324279	63328126	+	transcript1197.chr9.nnic@NA	transcript1197.chr9.nnic	NA	63324279	63328126	Gene ID= novel_gene_chr9_1198 TPM= 49.92 Transcript Type= NA
chr9	63815705	63819227	63815705	63819227	+	transcript1202.chr9.nnic@NA	transcript1202.chr9.nnic	NA	63815705	63819227	Gene ID= novel_gene_chr9_1203 TPM= 4.25 Transcript Type= NA
chr9	65675868	65733992	65675868	65733992	+	transcript1217.chr9.nic@CBWD5	transcript1217.chr9.nic	protein_coding	65675868,65679166,65681574,65682766,65690967,65692571,65693386,65698515,65702970,65708902,65720041,65731630,65731802,65732993,65733510	65676130,65679252,65681670,65682857,65691026,65692608,65693473,65698561,65703014,65708958,65720092,65731698,65731867,65733122,65733992	Gene ID= ENSG00000147996.16 TPM= 3.54 Transcript Type= NA
chr9	65675799	65734041	65675799	65734041	+	ENST00000382405.7@CBWD5	ENST00000382405.7	protein_coding	65675799,65679166,65681574,65682766,65690967,65692571,65698515,65700251,65702970,65708902,65720041,65731630,65731802,65732993,65733510	65676130,65679252,65681670,65682857,65691026,65692608,65698561,65700337,65703014,65708958,65720092,65731698,65731867,65733122,65734041	Gene ID= ENSG00000147996.16 TPM= 81.61 Transcript Type= protein_coding
chr9	65675868	65733672	65675868	65733672	+	transcript1221.chr9.nic@CBWD5	transcript1221.chr9.nic	protein_coding	65675868,65679166,65681574,65682766,65690967,65692571,65698515,65702970,65708902,65720041,65731630,65731802,65732993,65733510	65676130,65679252,65681670,65682857,65691026,65692608,65698561,65703014,65708958,65720092,65731698,65731867,65733122,65733672	Gene ID= ENSG00000147996.16 TPM= 3.19 Transcript Type= NA
chr9	65706433	65733992	65706433	65733992	+	ENST00000485088.5@CBWD5	ENST00000485088.5	protein_coding	65706433,65720041,65731630,65731802,65732993,65733510	65708958,65720092,65731698,65731867,65733122,65733992	Gene ID= ENSG00000147996.16 TPM= 3.8 Transcript Type= retained_intron
chr9	65675896	65733670	65675896	65733670	+	ENST00000497250.5@CBWD5	ENST00000497250.5	protein_coding	65675896,65679166,65681574,65682766,65690967,65692571,65693386,65698515,65700251,65702970,65708902,65720041,65731630,65731802,65732993,65733510	65676130,65679252,65681670,65682857,65691026,65692608,65693473,65698561,65700337,65703014,65708958,65720092,65731698,65731867,65733122,65733670	Gene ID= ENSG00000147996.16 TPM= 3.45 Transcript Type= nonsense_mediated_decay
chr9	66267761	66270550	66267761	66270550	-	transcript1233.chr9.nnic@NA	transcript1233.chr9.nnic	NA	66267761	66270550	Gene ID= novel_gene_chr9_1234 TPM= 3.19 Transcript Type= NA
chr9	66900729	66921439	66900729	66921439	+	ENST00000621410.4@ZNF658	ENST00000621410.4	protein_coding	66900729,66903518,66908238,66908639,66917805	66900836,66903576,66908364,66908734,66921439	Gene ID= ENSG00000274349.4 TPM= 2.12 Transcript Type= protein_coding
chr9	68356612	68479941	68356612	68479941	+	transcript1258.chr9.nic@PGM5	transcript1258.chr9.nic	protein_coding	68356612,68378199,68384398,68387463,68391534,68392319,68465093,68479418	68357388,68378361,68384544,68387588,68391724,68392473,68465208,68479941	Gene ID= ENSG00000154330.12 TPM= 2.47 Transcript Type= NA
chr9	68356573	68531061	68356573	68531061	+	transcript1270.chr9.nnic@PGM5	transcript1270.chr9.nnic	protein_coding	68356573,68378199,68384398,68387463,68530708	68357388,68378361,68384544,68387588,68531061	Gene ID= ENSG00000154330.12 TPM= 6.72 Transcript Type= NA
chr9	68355189	68357863	68355189	68357863	-	transcript1272.chr9.nic@PGM5-AS1	transcript1272.chr9.nic	antisense_RNA	68356290,68355189	68357863,68355605	Gene ID= ENSG00000224958.5 TPM= 2.47 Transcript Type= NA
chr9	68536932	68539742	68536932	68539742	+	transcript1273.chr9.nnic@NA	transcript1273.chr9.nnic	NA	68536932	68539742	Gene ID= novel_gene_chr9_1274 TPM= 2.12 Transcript Type= NA
chr9	68705647	68942438	68705647	68942438	+	transcript1279.chr9.nic@PIP5K1B	transcript1279.chr9.nic	protein_coding	68705647,68818461,68822615,68863837,68876677,68888981,68894339,68917548,68919479,68919681,68923302,68934890,68940646	68705762,68818545,68822683,68863967,68876794,68889133,68894638,68917759,68919562,68919729,68923386,68935045,68942438	Gene ID= ENSG00000107242.17 TPM= 4.25 Transcript Type= NA
chr9	68705700	69009175	68705700	69009175	+	ENST00000265382.7@PIP5K1B	ENST00000265382.7	protein_coding	68705700,68742501,68818461,68822615,68863837,68876677,68888981,68894339,68917548,68919479,68919681,68923302,68934890,68940646,68991140,69008447	68705762,68742657,68818545,68822683,68863967,68876794,68889133,68894638,68917759,68919562,68919729,68923386,68935045,68940790,68991257,69009175	Gene ID= ENSG00000107242.17 TPM= 4.25 Transcript Type= protein_coding
chr9	68753183	68754313	68753183	68754313	-	transcript1314.chr9.nnic@NA	transcript1314.chr9.nnic	NA	68753183	68754313	Gene ID= novel_gene_chr9_1315 TPM= 2.12 Transcript Type= NA
chr9	68754177	68755565	68754177	68755565	-	transcript1312.chr9.nnic@NA	transcript1312.chr9.nnic	NA	68754177	68755565	Gene ID= novel_gene_chr9_1313 TPM= 3.19 Transcript Type= NA
chr9	68780043	68781414	68780043	68781414	+	transcript1300.chr9.nnic@NA	transcript1300.chr9.nnic	NA	68780043	68781414	Gene ID= novel_gene_chr9_1301 TPM= 9.56 Transcript Type= NA
chr9	68951672	68953095	68951672	68953095	-	transcript1310.chr9.nnic@NA	transcript1310.chr9.nnic	NA	68951672	68953095	Gene ID= novel_gene_chr9_1311 TPM= 31.86 Transcript Type= NA
chr9	68952871	68975845	68952871	68975845	-	transcript1281.chr9.nnic@NA	transcript1281.chr9.nnic	NA	68975664,68957026,68952871	68975845,68957211,68954945	Gene ID= novel_gene_chr9_1282 TPM= 13.81 Transcript Type= NA
chr9	68953096	68975844	68953096	68975844	-	transcript1286.chr9.nnic@NA	transcript1286.chr9.nnic	NA	68975745,68957026,68953096	68975844,68957211,68954945	Gene ID= novel_gene_chr9_1287 TPM= 3.19 Transcript Type= NA
chr9	68969783	68975135	68969783	68975135	+	transcript1308.chr9.nnic@NA	transcript1308.chr9.nnic	NA	68969783	68975135	Gene ID= novel_gene_chr9_1309 TPM= 19.12 Transcript Type= NA
chr9	69035736	69111912	69035736	69111912	+	transcript1316.chr9.nnic@FXN	transcript1316.chr9.nnic	protein_coding	69035736,69046385,69053140,69064938,69099901,69111820	69035947,69046482,69053260,69065035,69100061,69111912	Gene ID= ENSG00000165060.11 TPM= 2.12 Transcript Type= NA
chr9	69035259	69074213	69035259	69074213	+	ENST00000377270.7@FXN	ENST00000377270.7	protein_coding	69035259,69046385,69053140,69064938,69072612	69035947,69046482,69053260,69065035,69074213	Gene ID= ENSG00000165060.11 TPM= 5.31 Transcript Type= protein_coding
chr9	69035762	69073022	69035762	69073022	+	ENST00000396366.6@FXN	ENST00000396366.6	protein_coding	69035762,69046385,69053140,69064938,69072612	69035947,69046482,69053260,69065043,69073022	Gene ID= ENSG00000165060.11 TPM= 1.06 Transcript Type= protein_coding
chr9	69174165	69255204	69174165	69255204	+	ENST00000377245.8@TJP2	ENST00000377245.8	protein_coding	69174165,69212548,69216339,69218257,69220887,69225304,69226022,69227765,69227981,69229184,69230082,69234439,69236028,69236949,69237878,69238710,69239937,69246690,69248012,69249375,69251035,69252815,69254209	69174432,69212601,69216463,69218359,69221496,69225407,69226175,69227873,69228114,69229250,69230232,69234547,69236238,69237136,69237973,69238789,69240147,69246790,69248224,69249485,69251364,69252900,69255204	Gene ID= ENSG00000119139.17 TPM= 6.11 Transcript Type= protein_coding
chr9	69174193	69255204	69174193	69255204	+	transcript1326.chr9.nic@TJP2	transcript1326.chr9.nic	protein_coding	69174193,69212548,69216339,69218257,69220887,69225304,69226022,69227765,69227981,69229184,69230082,69234439,69236028,69236949,69237878,69238710,69239937,69246690,69248012,69251035,69252815,69254209	69174432,69212601,69216463,69218359,69221496,69225407,69226175,69227873,69228114,69229250,69230232,69234547,69236238,69237136,69237973,69238789,69240147,69246790,69248224,69251364,69252900,69255204	Gene ID= ENSG00000119139.17 TPM= 30.54 Transcript Type= NA
chr9	69174277	69255204	69174277	69255204	+	ENST00000348208.8@TJP2	ENST00000348208.8	protein_coding	69174277,69212548,69216339,69218257,69220887,69225304,69226022,69227765,69227981,69229184,69230082,69234439,69236028,69236949,69237878,69238710,69239937,69246690,69248012,69252815,69254209	69174432,69212601,69216463,69218359,69221496,69225407,69226175,69227873,69228114,69229250,69230232,69234547,69236238,69237136,69237973,69238789,69240147,69246790,69248224,69252900,69255204	Gene ID= ENSG00000119139.17 TPM= 5.23 Transcript Type= protein_coding
chr9	69164559	69166717	69164559	69166717	-	transcript1330.chr9.nnic@NA	transcript1330.chr9.nnic	NA	69164559	69166717	Gene ID= novel_gene_chr9_1331 TPM= 2.12 Transcript Type= NA
chr9	69296685	69307136	69296685	69307136	-	transcript1332.chr9.nnic@BANCR	transcript1332.chr9.nnic	lincRNA	69306854,69306148,69304936,69296685	69307136,69306290,69305077,69296867	Gene ID= ENSG00000278910.3 TPM= 25.49 Transcript Type= NA
chr9	69296685	69306295	69296685	69306295	-	ENST00000624238.1@BANCR	ENST00000624238.1	lincRNA	69306148,69304936,69296685	69306295,69305077,69296867	Gene ID= ENSG00000278910.3 TPM= 1.06 Transcript Type= lincRNA
chr9	69324976	69392611	69324976	69392611	+	transcript1335.chr9.nnic@FAM189A2	transcript1335.chr9.nnic	protein_coding	69324976,69336213,69371499,69375736,69377370,69377611,69383630,69383947,69385795,69388158,69391601	69325723,69336269,69371609,69375864,69377477,69377744,69383759,69384025,69385947,69388450,69392611	Gene ID= ENSG00000135063.17 TPM= 4.51 Transcript Type= NA
chr9	69324971	69392454	69324971	69392454	+	transcript1337.chr9.nnic@FAM189A2	transcript1337.chr9.nnic	protein_coding	69324971,69336213,69371499,69375736,69377370,69377611,69383630,69383947,69385795,69391601	69325723,69336269,69371609,69375864,69377477,69377744,69383759,69384025,69385947,69392454	Gene ID= ENSG00000135063.17 TPM= 3.45 Transcript Type= NA
chr9	69325222	69392455	69325222	69392455	+	transcript1338.chr9.nnic@FAM189A2	transcript1338.chr9.nnic	protein_coding	69325222,69371499,69375736,69377370,69377611,69383630,69383947,69385795,69388158,69391601	69325723,69371609,69375864,69377477,69377744,69383759,69384025,69385947,69388450,69392455	Gene ID= ENSG00000135063.17 TPM= 2.12 Transcript Type= NA
chr9	69325115	69386504	69325115	69386504	+	transcript1339.chr9.nnic@FAM189A2	transcript1339.chr9.nnic	protein_coding	69325115,69336213,69371499,69375736,69377370,69377611,69383630,69383947,69385795	69325723,69336269,69371609,69375864,69377477,69377744,69383759,69384025,69386504	Gene ID= ENSG00000135063.17 TPM= 2.39 Transcript Type= NA
chr9	69324794	69327022	69324794	69327022	+	transcript1344.chr9.nnic@NA	transcript1344.chr9.nnic	NA	69324794	69327022	Gene ID= novel_gene_chr9_1345 TPM= 9.56 Transcript Type= NA
chr9	69334777	69336990	69334777	69336990	-	transcript1346.chr9.nnic@NA	transcript1346.chr9.nnic	NA	69334777	69336990	Gene ID= novel_gene_chr9_1347 TPM= 5.31 Transcript Type= NA
chr9	69366387	69372606	69366387	69372606	-	transcript1348.chr9.nnic@NA	transcript1348.chr9.nnic	NA	69366387	69372606	Gene ID= novel_gene_chr9_1349 TPM= 2.12 Transcript Type= NA
chr9	69757123	69759959	69757123	69759959	-	ENST00000472967.2@PTAR1	ENST00000472967.2	protein_coding	69759853,69757123	69759959,69758704	Gene ID= ENSG00000188647.12 TPM= 1.06 Transcript Type= protein_coding
chr9	70043581	70226970	70043581	70226970	+	ENST00000377182.4@MAMDC2	ENST00000377182.4	protein_coding	70043581,70044584,70108211,70109720,70112995,70126159,70131519,70140145,70143554,70168702,70170479,70218337,70225750,70225968	70044231,70044697,70108482,70109804,70113132,70126415,70131612,70140288,70143819,70168795,70170631,70218596,70225834,70226970	Gene ID= ENSG00000165072.9 TPM= 3.19 Transcript Type= protein_coding
chr9	70258962	70354888	70258962	70354888	+	ENST00000361138.6@SMC5	ENST00000361138.6	protein_coding	70258962,70264304,70267923,70277310,70278491,70280759,70282422,70286200,70297966,70300046,70305247,70314742,70315446,70318514,70318794,70323483,70324021,70344144,70346605,70347066,70347613,70347919,70350114,70350376,70352191	70259263,70264445,70267975,70277472,70278625,70280899,70282583,70286271,70298221,70300200,70305360,70314836,70315578,70318687,70318963,70323606,70324143,70344269,70346649,70347161,70347717,70348038,70350293,70350471,70354888	Gene ID= ENSG00000198887.8 TPM= 4.25 Transcript Type= protein_coding
chr9	70405692	70406910	70405692	70406910	+	transcript1366.chr9.nnic@NA	transcript1366.chr9.nnic	NA	70405692	70406910	Gene ID= novel_gene_chr9_1367 TPM= 2.12 Transcript Type= NA
chr9	72351425	72364592	72351425	72364592	-	ENST00000237937.7@ZFAND5	ENST00000237937.7	protein_coding	72364462,72360628,72360110,72359418,72356931,72351425	72364592,72360787,72360221,72359521,72357056,72356101	Gene ID= ENSG00000107372.12 TPM= 3.54 Transcript Type= protein_coding
chr9	72354458	72365235	72354458	72365235	-	ENST00000376960.8@ZFAND5	ENST00000376960.8	protein_coding	72364696,72360628,72360110,72359418,72356931,72354458	72365235,72360787,72360221,72359521,72357056,72356101	Gene ID= ENSG00000107372.12 TPM= 92.76 Transcript Type= protein_coding
chr9	72354458	72365197	72354458	72365197	-	ENST00000376962.9@ZFAND5	ENST00000376962.9	protein_coding	72364696,72363470,72360628,72360110,72359418,72356931,72354458	72365197,72363606,72360787,72360221,72359521,72357056,72356101	Gene ID= ENSG00000107372.12 TPM= 58.77 Transcript Type= protein_coding
chr9	72900662	72953055	72900662	72953055	-	ENST00000297785.7@ALDH1A1	ENST00000297785.7	protein_coding	72952935,72940148,72930879,72928892,72927116,72925484,72924019,72918720,72916920,72911958,72909602,72905958,72900662	72953055,72940252,72931019,72929021,72927177,72925612,72924132,72918822,72917104,72912122,72909759,72906032,72901280	Gene ID= ENSG00000165092.12 TPM= 7.44 Transcript Type= protein_coding
chr9	73151866	73170393	73151866	73170393	+	transcript1384.chr9.nnic@ANXA1	transcript1384.chr9.nnic	protein_coding	73151866,73154461,73158522,73158695,73159329,73160263,73160803,73162782,73163476,73165116,73166097,73167497,73169032,73170051	73151924,73154581,73158601,73158803,73159423,73160376,73160893,73162861,73163532,73165209,73166192,73167555,73169154,73170393	Gene ID= ENSG00000135046.13 TPM= 3.72 Transcript Type= NA
chr9	73151757	73170393	73151757	73170393	+	ENST00000257497.10@ANXA1	ENST00000257497.10	protein_coding	73151757,73158522,73158695,73159329,73160263,73160803,73162782,73163476,73165116,73166097,73167497,73169032,73170051	73151924,73158601,73158803,73159423,73160376,73160893,73162861,73163532,73165209,73166192,73167555,73169154,73170393	Gene ID= ENSG00000135046.13 TPM= 41.96 Transcript Type= protein_coding
chr9	73445666	73455102	73445666	73455102	+	transcript1390.chr9.nnic@NA	transcript1390.chr9.nnic	NA	73445666,73449391,73452780,73454887	73445719,73449507,73452914,73455102	Gene ID= novel_gene_chr9_1391 TPM= 8.5 Transcript Type= NA
chr9	73445666	73623789	73445666	73623789	+	transcript1387.chr9.nnic@AL451127.1	transcript1387.chr9.nnic	lincRNA	73445666,73449391,73452780,73603364,73606456,73622648	73445719,73449507,73452914,73603554,73606623,73623789	Gene ID= ENSG00000232590.1 TPM= 2.12 Transcript Type= NA
chr9	73445678	73455102	73445678	73455102	+	transcript1396.chr9.nnic@NA	transcript1396.chr9.nnic	NA	73445678,73452780,73454887	73445719,73452914,73455102	Gene ID= novel_gene_chr9_1397 TPM= 8.5 Transcript Type= NA
chr9	73447726	73450539	73447726	73450539	-	transcript1399.chr9.nnic@NA	transcript1399.chr9.nnic	NA	73447726	73450539	Gene ID= novel_gene_chr9_1400 TPM= 2.12 Transcript Type= NA
chr9	74946581	74952886	74946581	74952886	-	ENST00000376854.5@C9orf40	ENST00000376854.5	protein_coding	74952186,74946581	74952886,74948206	Gene ID= ENSG00000135045.6 TPM= 2.12 Transcript Type= protein_coding
chr9	74981020	75028394	74981020	75028394	-	ENST00000376834.7@CARNMT1	ENST00000376834.7	protein_coding	75028012,75017253,75016268,74999730,74998598,74996447,74984907,74981020	75028394,75017448,75016431,74999870,74998776,74996560,74985010,74983868	Gene ID= ENSG00000156017.12 TPM= 9.56 Transcript Type= protein_coding
chr9	75061200	75088241	75061200	75088241	-	transcript1417.chr9.nnic@NMRK1	transcript1417.chr9.nnic	protein_coding	75088008,75083087,75078326,75077490,75077159,75069895,75069742,75068996,75066757,75061200	75088241,75083150,75078611,75077580,75077207,75070042,75069813,75069102,75066840,75061567	Gene ID= ENSG00000106733.20 TPM= 3.54 Transcript Type= NA
chr9	75061200	75088209	75061200	75088209	-	ENST00000361092.8@NMRK1	ENST00000361092.8	protein_coding	75088008,75083087,75077490,75077159,75069895,75069742,75068996,75066757,75061200	75088209,75083150,75077580,75077207,75070042,75069813,75069102,75066840,75061567	Gene ID= ENSG00000106733.20 TPM= 13.1 Transcript Type= protein_coding
chr9	75061200	75088217	75061200	75088217	-	ENST00000376808.8@NMRK1	ENST00000376808.8	protein_coding	75088008,75083087,75077490,75077159,75069895,75068996,75066757,75061200	75088217,75083150,75077580,75077207,75070042,75069102,75066840,75061567	Gene ID= ENSG00000106733.20 TPM= 2.47 Transcript Type= protein_coding
chr9	76385517	76394505	76385517	76394505	-	ENST00000376736.5@RFK	ENST00000376736.5	protein_coding	76394090,76392418,76388554,76385517	76394505,76392569,76388656,76387529	Gene ID= ENSG00000135002.11 TPM= 56.29 Transcript Type= protein_coding
chr9	76459230	76507416	76459230	76507416	+	ENST00000376730.4@GCNT1	ENST00000376730.4	protein_coding	76459230,76460060,76500916,76502239	76459305,76460177,76501061,76507416	Gene ID= ENSG00000187210.12 TPM= 1.06 Transcript Type= protein_coding
chr9	76459152	76507414	76459152	76507414	+	ENST00000444201.6@GCNT1	ENST00000444201.6	protein_coding	76459152,76500916,76502239	76459305,76501061,76507414	Gene ID= ENSG00000187210.12 TPM= 1.06 Transcript Type= protein_coding
chr9	76611378	76692208	76611378	76692208	-	transcript1439.chr9.nnic@PRUNE2	transcript1439.chr9.nnic	protein_coding	76692074,76655423,76652483,76644739,76638186,76637418,76636471,76629192,76625023,76619340,76615191,76611378	76692208,76655502,76652683,76644912,76638288,76637549,76636557,76629290,76625058,76619387,76615237,76614600	Gene ID= ENSG00000106772.17 TPM= 4.25 Transcript Type= NA
chr9	76611376	76692208	76611376	76692208	-	transcript1443.chr9.nic@PRUNE2	transcript1443.chr9.nic	protein_coding	76692074,76655423,76652483,76644739,76638186,76637418,76636471,76629192,76625023,76619340,76611376	76692208,76655502,76652683,76644909,76638288,76637549,76636557,76629290,76625058,76619387,76614600	Gene ID= ENSG00000106772.17 TPM= 7.44 Transcript Type= NA
chr9	76823248	76906087	76823248	76906087	-	ENST00000492157.5@PRUNE2	ENST00000492157.5	protein_coding	76905928,76854104,76850463,76846515,76826580,76823248	76906087,76854208,76850665,76846678,76826732,76823726	Gene ID= ENSG00000106772.17 TPM= 1.06 Transcript Type= processed_transcript
chr9	77423079	77648307	77423079	77648307	-	ENST00000341700.6@GNA14	ENST00000341700.6	protein_coding	77647670,77529069,77434368,77431321,77428907,77425562,77423079	77648307,77529253,77434522,77431449,77429036,77425715,77424169	Gene ID= ENSG00000156049.6 TPM= 2.12 Transcript Type= protein_coding
chr9	78236068	78267067	78236068	78267067	+	transcript1461.chr9.nic@CEP78	transcript1461.chr9.nic	protein_coding	78236068,78240023,78240292,78241696,78243462,78246669,78248291,78248762,78251908,78253232,78254836,78262907,78264150,78265372,78265859,78266442	78236659,78240195,78240364,78241799,78243636,78246782,78248355,78248873,78252043,78253277,78254964,78262984,78264316,78265543,78265906,78267067	Gene ID= ENSG00000148019.12 TPM= 2.12 Transcript Type= NA
chr9	78297143	78330093	78297143	78330093	+	ENST00000376588.3@PSAT1	ENST00000376588.3	protein_coding	78297143,78300602,78301954,78304735,78306314,78308414,78317676,78328051,78328981	78297270,78300662,78302023,78304940,78306486,78308583,78317804,78328188,78330093	Gene ID= ENSG00000135069.13 TPM= 2.12 Transcript Type= protein_coding
chr9	79641950	79644620	79641950	79644620	-	transcript1467.chr9.nnic@NA	transcript1467.chr9.nnic	NA	79641950	79644620	Gene ID= novel_gene_chr9_1468 TPM= 2.12 Transcript Type= NA
chr9	81583683	81689546	81583683	81689546	-	transcript1469.chr9.nic@TLE1	transcript1469.chr9.nic	protein_coding	81688217,81687334,81685833,81685676,81653974,81652184,81634097,81633348,81620441,81616646,81615982,81613377,81611769,81610220,81593025,81590805,81587681,81585505,81584448,81583683	81689546,81687434,81685896,81685720,81654036,81652288,81634301,81633364,81620557,81616699,81616134,81613521,81611959,81610296,81593274,81591052,81587828,81585655,81584524,81584305	Gene ID= ENSG00000196781.14 TPM= 2.12 Transcript Type= NA
chr9	81633469	81689647	81633469	81689647	-	transcript1476.chr9.nic@TLE1	transcript1476.chr9.nic	protein_coding	81688217,81687334,81685833,81685676,81653974,81652184,81633469	81689647,81687434,81685896,81685720,81654036,81652288,81634301	Gene ID= ENSG00000196781.14 TPM= 3.19 Transcript Type= NA
chr9	83242992	83267285	83242992	83267285	-	transcript1485.chr9.nnic@FRMD3	transcript1485.chr9.nnic	protein_coding	83267012,83248055,83246764,83242992	83267285,83248516,83246868,83243215	Gene ID= ENSG00000172159.15 TPM= 2.84 Transcript Type= NA
chr9	83242990	83266752	83242990	83266752	-	transcript1489.chr9.nnic@FRMD3	transcript1489.chr9.nnic	protein_coding	83266598,83248055,83242990	83266752,83248516,83243215	Gene ID= ENSG00000172159.15 TPM= 2.84 Transcript Type= NA
chr9	83242990	83267287	83242990	83267287	-	ENST00000328788.5@FRMD3	ENST00000328788.5	protein_coding	83267012,83248055,83242990	83267287,83248516,83243215	Gene ID= ENSG00000172159.15 TPM= 44.26 Transcript Type= protein_coding
chr9	83244622	83267285	83244622	83267285	-	transcript1496.chr9.nic@FRMD3	transcript1496.chr9.nic	protein_coding	83267012,83244622	83267285,83248516	Gene ID= ENSG00000172159.15 TPM= 11.68 Transcript Type= NA
chr9	83246762	83267285	83246762	83267285	-	transcript1497.chr9.nic@FRMD3	transcript1497.chr9.nic	protein_coding	83267012,83246762	83267285,83248516	Gene ID= ENSG00000172159.15 TPM= 4.25 Transcript Type= NA
chr9	83247385	83267285	83247385	83267285	-	transcript1499.chr9.nic@FRMD3	transcript1499.chr9.nic	protein_coding	83267012,83247385	83267285,83248516	Gene ID= ENSG00000172159.15 TPM= 37.18 Transcript Type= NA
chr9	83623147	83644129	83623147	83644129	+	transcript1507.chr9.nnic@IDNK	transcript1507.chr9.nnic	protein_coding	83623147,83628181,83628873,83641548,83643429	83623523,83628211,83628959,83641591,83644129	Gene ID= ENSG00000148057.15 TPM= 4.25 Transcript Type= NA
chr9	83661429	83707934	83661429	83707934	-	ENST00000257468.11@UBQLN1	ENST00000257468.11	protein_coding	83707500,83686004,83682951,83679775,83678441,83677727,83669185,83665030,83663875,83661429	83707934,83686155,83683066,83680037,83678599,83677961,83669327,83665145,83664043,83661939	Gene ID= ENSG00000135018.13 TPM= 26.55 Transcript Type= protein_coding
chr9	83806355	83817808	83806355	83817808	-	transcript1534.chr9.nic@GKAP1	transcript1534.chr9.nic	protein_coding	83817517,83816996,83806355	83817808,83817127,83806560	Gene ID= ENSG00000165113.12 TPM= 4.25 Transcript Type= NA
chr9	83739421	83817742	83739421	83817742	-	ENST00000376371.6@GKAP1	ENST00000376371.6	protein_coding	83817517,83816996,83806302,83799185,83788601,83784715,83780382,83768818,83753258,83748309,83742530,83741952,83739421	83817742,83817127,83806560,83799328,83788678,83784838,83780404,83768970,83753359,83748372,83742600,83742029,83739744	Gene ID= ENSG00000165113.12 TPM= 8.5 Transcript Type= protein_coding
chr9	83938311	83956717	83938311	83956717	-	ENST00000376344.7@C9orf64	ENST00000376344.7	protein_coding	83956164,83955381,83944794,83938311	83956717,83955640,83944989,83939743	Gene ID= ENSG00000165118.14 TPM= 11.68 Transcript Type= protein_coding
chr9	83968084	83980269	83968084	83980269	-	ENST00000376263.7@HNRNPK	ENST00000376263.7	protein_coding	83980153,83978373,83978195,83977689,83976995,83975462,83974517,83973902,83973286,83972844,83971882,83971672,83971273,83970897,83970737,83970162,83968084	83980269,83978452,83978279,83977786,83977051,83975505,83974589,83973973,83973399,83972972,83972189,83971726,83971356,83970912,83970819,83970331,83969440	Gene ID= ENSG00000165119.20 TPM= 3.44 Transcript Type= protein_coding
chr9	83968086	83980646	83968086	83980646	-	transcript1542.chr9.nic@HNRNPK	transcript1542.chr9.nic	protein_coding	83980503,83978373,83978195,83977689,83976995,83975462,83974517,83973902,83973286,83972844,83971882,83971672,83971273,83970897,83970737,83970162,83968086	83980646,83978452,83978279,83977786,83977051,83975505,83974589,83973973,83973399,83972972,83972189,83971726,83971356,83970912,83970819,83970331,83969380	Gene ID= ENSG00000165119.20 TPM= 7.86 Transcript Type= NA
chr9	83968909	83980250	83968909	83980250	-	ENST00000360384.9@HNRNPK	ENST00000360384.9	protein_coding	83980153,83978373,83978195,83977689,83976995,83975462,83974517,83973902,83973286,83972844,83971882,83971672,83971273,83970897,83970737,83970162,83968909	83980250,83978452,83978279,83977786,83977051,83975505,83974589,83973973,83973399,83972972,83972189,83971726,83971356,83970912,83970819,83970331,83969380	Gene ID= ENSG00000165119.20 TPM= 5.92 Transcript Type= protein_coding
chr9	83968909	83980215	83968909	83980215	-	transcript1559.chr9.nnic@HNRNPK	transcript1559.chr9.nnic	protein_coding	83980119,83978373,83978195,83977689,83976995,83975462,83974517,83973902,83973286,83972844,83971882,83971672,83971273,83970897,83970737,83970162,83968909	83980215,83978452,83978279,83977786,83977051,83975505,83974589,83973973,83973399,83972972,83972189,83971726,83971356,83970912,83970819,83970331,83969440	Gene ID= ENSG00000165119.20 TPM= 9.45 Transcript Type= NA
chr9	83968909	83980646	83968909	83980646	-	transcript1568.chr9.nic@HNRNPK	transcript1568.chr9.nic	protein_coding	83980503,83978373,83978195,83977689,83976995,83975462,83974517,83973286,83972844,83971882,83971672,83971273,83970897,83970737,83970162,83968909	83980646,83978452,83978279,83977786,83977051,83975505,83974589,83973399,83972972,83972189,83971726,83971356,83970912,83970819,83970331,83969380	Gene ID= ENSG00000165119.20 TPM= 4.46 Transcript Type= NA
chr9	83968083	83980604	83968083	83980604	-	ENST00000376281.8@HNRNPK	ENST00000376281.8	protein_coding	83980503,83978373,83978195,83977689,83976995,83975462,83974517,83973902,83973286,83972844,83971882,83971672,83971273,83970897,83970737,83970162,83968083	83980604,83978452,83978279,83977786,83977051,83975505,83974589,83973973,83973399,83972972,83972189,83971726,83971356,83970912,83970819,83970331,83969440	Gene ID= ENSG00000165119.20 TPM= 4.5 Transcript Type= protein_coding
chr9	83968197	83978452	83968197	83978452	-	ENST00000351839.7@HNRNPK	ENST00000351839.7	protein_coding	83978373,83978195,83977689,83976995,83975462,83974517,83973902,83973286,83972844,83971882,83971672,83971273,83970897,83970737,83970162,83968197	83978452,83978279,83977786,83977051,83975505,83974589,83973973,83973399,83972972,83972189,83971726,83971356,83970912,83970819,83970331,83969380	Gene ID= ENSG00000165119.20 TPM= 10.7 Transcript Type= protein_coding
chr9	83980713	84004074	83980713	84004074	+	transcript1575.chr9.nnic@RMI1	transcript1575.chr9.nnic	protein_coding	83980713,83988329,83999709,84000951	83980891,83988404,83999797,84004074	Gene ID= ENSG00000178966.16 TPM= 2.12 Transcript Type= NA
chr9	85546542	85741886	85546542	85741886	-	ENST00000357081.7@AGTPBP1	ENST00000357081.7	protein_coding	85741775,85712502,85692689,85681268,85678335,85677436,85672550,85669485,85660936,85657435,85655143,85646321,85642827,85632662,85621202,85619215,85618983,85596362,85592560,85589528,85588298,85586831,85585463,85578920,85575315,85546542	85741886,85712566,85692813,85681335,85678398,85677582,85672681,85669578,85660973,85657643,85655320,85646418,85642943,85633374,85621285,85619301,85619131,85596449,85592704,85589681,85588478,85586960,85585594,85579096,85575475,85547286	Gene ID= ENSG00000135049.15 TPM= 5.31 Transcript Type= protein_coding
chr9	85941263	86022298	85941263	86022298	+	transcript1608.chr9.nic@NAA35	transcript1608.chr9.nic	protein_coding	85941263,85942155,85956360,85958472,85959793,85962013,85974967,85975114,85976685,85977363,85978267,85996399,86003585,86007358,86009865,86013046,86013719,86016539,86017498,86018255,86018699,86020889,86021901	85941874,85942283,85956393,85958586,85959867,85962180,85975033,85975157,85976735,85977446,85978381,85996577,86003644,86007464,86009931,86013144,86013897,86016675,86017565,86018395,86018821,86020969,86022298	Gene ID= ENSG00000135040.15 TPM= 4.25 Transcript Type= NA
chr9	85941039	86016670	85941039	86016670	+	transcript1611.chr9.nic@NAA35	transcript1611.chr9.nic	protein_coding	85941039,85942155,85956360,85958472,85959793,85962013,85974967,85975114,85976685,85977363,85978267,85996399,86003585,86007358,86009865,86013046,86013719,86016539	85941273,85942283,85956393,85958586,85959867,85962180,85975033,85975157,85976735,85977446,85978381,85996577,86003644,86007464,86009931,86013144,86013897,86016670	Gene ID= ENSG00000135040.15 TPM= 11.68 Transcript Type= NA
chr9	85941146	86022298	85941146	86022298	+	ENST00000361671.9@NAA35	ENST00000361671.9	protein_coding	85941146,85942155,85956360,85958472,85959793,85962013,85974967,85975114,85976685,85977363,85978267,85996399,86003585,86007358,86009865,86013046,86013719,86016539,86017498,86018255,86018699,86020889,86021901	85941273,85942283,85956393,85958586,85959867,85962180,85975033,85975157,85976735,85977446,85978381,85996577,86003644,86007464,86009931,86013144,86013897,86016675,86017565,86018395,86018821,86020969,86022298	Gene ID= ENSG00000135040.15 TPM= 2.12 Transcript Type= protein_coding
chr9	86023654	86026965	86023654	86026965	+	transcript1619.chr9.nnic@NA	transcript1619.chr9.nnic	NA	86023654	86026965	Gene ID= novel_gene_chr9_1620 TPM= 2.12 Transcript Type= NA
chr9	86026146	86099558	86026146	86099558	-	ENST00000388712.7@GOLM1	ENST00000388712.7	protein_coding	86099411,86079192,86077412,86052537,86046470,86040739,86036348,86035368,86033282,86026146	86099558,86079341,86077591,86052591,86046572,86040868,86036507,86035625,86033395,86027893	Gene ID= ENSG00000135052.16 TPM= 9.56 Transcript Type= protein_coding
chr9	86264546	86282529	86264546	86282529	-	ENST00000375991.8@ISCA1	ENST00000375991.8	protein_coding	86282378,86274189,86272007,86264546	86282529,86274242,86272112,86266191	Gene ID= ENSG00000135070.14 TPM= 82.85 Transcript Type= protein_coding
chr9	86323499	86354429	86323499	86354429	-	transcript1628.chr9.nic@ZCCHC6	transcript1628.chr9.nic	protein_coding	86354271,86352680,86346299,86345669,86344977,86343075,86341002,86340036,86338823,86337419,86328340,86325334,86323499	86354429,86353230,86346480,86345785,86345154,86343163,86341053,86340105,86338949,86337538,86328492,86325514,86323960	Gene ID= ENSG00000083223.17 TPM= 3.19 Transcript Type= NA
chr9	86323623	86354159	86323623	86354159	-	transcript1629.chr9.nnic@ZCCHC6	transcript1629.chr9.nnic	protein_coding	86353450,86352680,86346299,86345669,86344977,86343075,86341002,86340036,86338823,86337419,86328340,86325334,86323623	86354159,86353230,86346480,86345785,86345154,86343163,86341053,86340105,86338949,86337538,86328492,86325514,86323960	Gene ID= ENSG00000083223.17 TPM= 2.12 Transcript Type= NA
chr9	86297923	86298053	86297923	86298053	-	transcript1630.chr9.nnic@NA	transcript1630.chr9.nnic	NA	86297923	86298053	Gene ID= novel_gene_chr9_1631 TPM= 2.12 Transcript Type= NA
chr9	86944363	86947189	86944363	86947189	-	ENST00000298743.8@GAS1	ENST00000298743.8	protein_coding	86944363	86947189	Gene ID= ENSG00000180447.6 TPM= 7.44 Transcript Type= protein_coding
chr9	87725519	87731392	87725519	87731392	+	ENST00000343150.9@CTSL	ENST00000343150.9	protein_coding	87725519,87727594,87728027,87728250,87728585,87729573,87730381,87731008	87726398,87727729,87728149,87728396,87728809,87729735,87730498,87731392	Gene ID= ENSG00000135047.14 TPM= 83.56 Transcript Type= protein_coding
chr9	87726054	87731393	87726054	87731393	+	transcript1637.chr9.nic@CTSL	transcript1637.chr9.nic	protein_coding	87726054,87727594,87728027,87728250,87728585,87729573,87730381,87731008	87726308,87727729,87728149,87728396,87728809,87729735,87730498,87731393	Gene ID= ENSG00000135047.14 TPM= 20.36 Transcript Type= NA
chr9	87726109	87731386	87726109	87731386	+	ENST00000340342.10@CTSL	ENST00000340342.10	protein_coding	87726109,87727594,87728027,87728250,87728585,87729573,87730381,87731008	87726253,87727729,87728149,87728396,87728809,87729735,87730498,87731386	Gene ID= ENSG00000135047.14 TPM= 30.98 Transcript Type= protein_coding
chr9	87966446	87974753	87966446	87974753	-	ENST00000375883.7@CDK20	ENST00000375883.7	protein_coding	87974372,87973922,87971147,87970776,87969796,87969194,87966446	87974753,87974035,87971335,87970897,87969919,87969349,87967659	Gene ID= ENSG00000156345.17 TPM= 3.19 Transcript Type= protein_coding
chr9	88389018	88478694	88389018	88478694	+	transcript1647.chr9.nnic@SPIN1	transcript1647.chr9.nnic	protein_coding	88389018,88426382,88448941,88462496,88468372,88475078	88389114,88426591,88448989,88462749,88468605,88478694	Gene ID= ENSG00000106723.16 TPM= 2.12 Transcript Type= NA
chr9	88388336	88478694	88388336	88478694	+	transcript1651.chr9.nic@SPIN1	transcript1651.chr9.nic	protein_coding	88388336,88448941,88468372,88475078	88388538,88448989,88468605,88478694	Gene ID= ENSG00000106723.16 TPM= 2.12 Transcript Type= NA
chr9	88388419	88478694	88388419	88478694	+	ENST00000375859.3@SPIN1	ENST00000375859.3	protein_coding	88388419,88426382,88448941,88462496,88468372,88475078	88388538,88426591,88448989,88462749,88468605,88478694	Gene ID= ENSG00000106723.16 TPM= 28.68 Transcript Type= protein_coding
chr9	88444238	88445705	88444238	88445705	-	transcript1652.chr9.nnic@NA	transcript1652.chr9.nnic	NA	88444238	88445705	Gene ID= novel_gene_chr9_1653 TPM= 4.25 Transcript Type= NA
chr9	88991447	89005010	88991447	89005010	+	ENST00000358157.2@S1PR3	ENST00000358157.2	protein_coding	88991447,89001054	88991695,89005010	Gene ID= ENSG00000213694.3 TPM= 15.93 Transcript Type= protein_coding
chr9	89310023	89310928	89310023	89310928	-	transcript1656.chr9.nnic@NA	transcript1656.chr9.nnic	NA	89310023	89310928	Gene ID= novel_gene_chr9_1657 TPM= 3.19 Transcript Type= NA
chr9	89311198	89316703	89311198	89316703	+	ENST00000314355.6@CKS2	ENST00000314355.6	protein_coding	89311198,89315170,89316373	89311351,89315297,89316703	Gene ID= ENSG00000123975.4 TPM= 3.19 Transcript Type= protein_coding
chr9	89318470	89338510	89318470	89338510	+	transcript1669.chr9.nic@SECISBP2	transcript1669.chr9.nic	protein_coding	89318470,89319652,89325427,89325897,89328660,89332908,89334522,89338458	89318612,89319797,89325676,89326038,89328886,89332986,89334730,89338510	Gene ID= ENSG00000187742.14 TPM= 9.56 Transcript Type= NA
chr9	89318470	89320380	89318470	89320380	+	transcript1673.chr9.nic@SECISBP2	transcript1673.chr9.nic	protein_coding	89318470,89319652	89318612,89320380	Gene ID= ENSG00000187742.14 TPM= 2.12 Transcript Type= NA
chr9	89318506	89359650	89318506	89359650	+	ENST00000375807.7@SECISBP2	ENST00000375807.7	protein_coding	89318506,89319652,89325427,89325897,89328660,89332908,89334522,89338458,89339864,89341347,89346882,89348079,89349776,89350632,89357411,89357999,89358721	89318612,89319797,89325676,89326038,89328886,89332986,89334730,89338580,89339953,89341479,89347048,89348214,89349929,89350852,89357565,89358191,89359650	Gene ID= ENSG00000187742.14 TPM= 4.25 Transcript Type= protein_coding
chr9	89361609	89498140	89361609	89498140	-	transcript1677.chr9.nic@SEMA4D	transcript1677.chr9.nic	protein_coding	89497919,89455888,89405351,89402871,89399276,89396737,89393562,89392423,89391264,89388872,89388636,89387386,89386367,89381174,89381055,89376833,89363741,89363430,89361609	89498140,89455953,89405699,89403016,89399338,89396835,89393655,89392536,89391415,89389047,89388792,89387608,89386482,89381346,89381098,89377051,89363950,89363527,89362428	Gene ID= ENSG00000187764.11 TPM= 11.15 Transcript Type= NA
chr9	89361609	89498130	89361609	89498130	-	ENST00000455551.6@SEMA4D	ENST00000455551.6	protein_coding	89497919,89455888,89418056,89405351,89402871,89399276,89396737,89393562,89392423,89391264,89388872,89388636,89387386,89386367,89381174,89381055,89376833,89363741,89363430,89361609	89498130,89455953,89418118,89405699,89403016,89399338,89396835,89393655,89392536,89391415,89389047,89388792,89387608,89386482,89381346,89381098,89377051,89363950,89363527,89362428	Gene ID= ENSG00000187764.11 TPM= 29.21 Transcript Type= protein_coding
chr9	89605012	89606555	89605012	89606555	+	transcript1680.chr9.nnic@GADD45G	transcript1680.chr9.nnic	protein_coding	89605012,89605667,89605969	89605174,89605880,89606555	Gene ID= ENSG00000130222.10 TPM= 4.25 Transcript Type= NA
chr9	89605012	89606555	89605012	89606555	+	transcript1681.chr9.nic@GADD45G	transcript1681.chr9.nic	protein_coding	89605012,89605969	89605880,89606555	Gene ID= ENSG00000130222.10 TPM= 9.56 Transcript Type= NA
chr9	89605013	89606555	89605013	89606555	+	ENST00000252506.10@GADD45G	ENST00000252506.10	protein_coding	89605013,89605432,89605667,89605969	89605174,89605533,89605880,89606555	Gene ID= ENSG00000130222.10 TPM= 84.97 Transcript Type= protein_coding
chr9	91119062	91182762	91119062	91182762	+	ENST00000439438.1@LINC00484	ENST00000439438.1	lincRNA	91119062,91119228,91182469	91119086,91119362,91182762	Gene ID= ENSG00000229694.6 TPM= 2.12 Transcript Type= lincRNA
chr9	91144473	91146274	91144473	91146274	+	transcript1687.chr9.nnic@NA	transcript1687.chr9.nnic	NA	91144473	91146274	Gene ID= novel_gene_chr9_1688 TPM= 2.12 Transcript Type= NA
chr9	91213815	91361913	91213815	91361913	-	transcript1689.chr9.nnic@AUH	transcript1689.chr9.nnic	protein_coding	91361628,91357484,91356088,91355883,91325318,91297984,91296021,91220805,91217277,91216059,91213815	91361913,91357513,91356155,91355970,91325404,91298076,91296077,91220992,91217327,91216106,91214425	Gene ID= ENSG00000148090.11 TPM= 2.12 Transcript Type= NA
chr9	91218360	91361973	91218360	91361973	-	transcript1699.chr9.nnic@AUH	transcript1699.chr9.nnic	protein_coding	91361628,91356088,91355883,91325318,91297984,91296021,91220805,91218360	91361973,91356155,91355970,91325404,91298076,91296077,91220992,91218957	Gene ID= ENSG00000148090.11 TPM= 17.53 Transcript Type= NA
chr9	91292801	91361918	91292801	91361918	-	transcript1705.chr9.nnic@AUH	transcript1705.chr9.nnic	protein_coding	91361628,91356088,91355883,91325318,91297984,91296021,91292801	91361918,91356155,91355970,91325404,91298076,91296077,91294797	Gene ID= ENSG00000148090.11 TPM= 3.19 Transcript Type= NA
chr9	91213815	91361913	91213815	91361913	-	ENST00000375731.8@AUH	ENST00000375731.8	protein_coding	91361628,91356088,91355883,91325318,91297984,91296021,91220805,91217277,91216059,91213815	91361913,91356155,91355970,91325404,91298076,91296077,91220992,91217327,91216106,91214425	Gene ID= ENSG00000148090.11 TPM= 21.24 Transcript Type= protein_coding
chr9	91357968	91360028	91357968	91360028	+	transcript1707.chr9.nnic@NA	transcript1707.chr9.nnic	NA	91357968	91360028	Gene ID= novel_gene_chr9_1708 TPM= 2.12 Transcript Type= NA
chr9	91409048	91425056	91409048	91425056	-	transcript1712.chr9.nnic@NFIL3	transcript1712.chr9.nnic	protein_coding	91424703,91409048	91425056,91410906	Gene ID= ENSG00000165030.3 TPM= 2.12 Transcript Type= NA
chr9	91409045	91423862	91409045	91423862	-	ENST00000297689.3@NFIL3	ENST00000297689.3	protein_coding	91423640,91409045	91423862,91410906	Gene ID= ENSG00000165030.3 TPM= 60.54 Transcript Type= protein_coding
chr9	92107175	92115388	92107175	92115388	-	transcript1724.chr9.nic@SPTLC1	transcript1724.chr9.nic	protein_coding	92115314,92112455,92108740,92107175	92115388,92112562,92108834,92108069	Gene ID= ENSG00000090054.13 TPM= 4.25 Transcript Type= NA
chr9	92031999	92115376	92031999	92115376	-	ENST00000262554.6@SPTLC1	ENST00000262554.6	protein_coding	92115314,92112455,92108740,92080870,92080016,92067966,92059179,92055405,92049960,92047613,92047172,92045999,92038248,92034810,92031999	92115376,92112562,92108834,92080963,92080088,92068098,92059308,92055494,92050067,92047708,92047268,92046053,92038365,92034883,92032558	Gene ID= ENSG00000090054.13 TPM= 4.25 Transcript Type= protein_coding
chr9	92079061	92115383	92079061	92115383	-	ENST00000337841.4@SPTLC1	ENST00000337841.4	protein_coding	92115314,92112455,92108740,92080870,92080016,92079061	92115383,92112562,92108834,92080963,92080088,92079566	Gene ID= ENSG00000090054.13 TPM= 3.19 Transcript Type= protein_coding
chr9	92210211	92293756	92210211	92293756	-	ENST00000627121.2@IARS	ENST00000627121.2	protein_coding	92293611,92289301,92288126,92287791,92286536,92285722,92280746,92278199,92277863,92274426,92271533,92270985,92269885,92268174,92265480,92264929,92262969,92260151,92258854,92256680,92253362,92251808,92250713,92250187,92249858,92247377,92244959,92243216,92242154,92240856,92240643,92229001,92223346,92222520,92210211	92293756,92289426,92288282,92287910,92286618,92285839,92280893,92278286,92277923,92274521,92271655,92271076,92269983,92268300,92265553,92265123,92263055,92260234,92258998,92256800,92253453,92251885,92250834,92250289,92249941,92247551,92245071,92243311,92242330,92240961,92240691,92229126,92223489,92222672,92210889	Gene ID= ENSG00000196305.17 TPM= 3.19 Transcript Type= protein_coding
chr9	92210345	92293694	92210345	92293694	-	ENST00000443024.6@IARS	ENST00000443024.6	protein_coding	92293611,92289301,92288126,92287791,92286536,92285722,92280746,92278199,92277863,92274426,92271533,92270985,92269885,92268174,92265480,92264929,92262969,92260151,92258854,92256680,92253362,92251808,92250713,92250187,92249858,92247377,92244959,92243216,92242154,92240856,92229001,92223346,92222520,92210873,92210345	92293694,92289426,92288282,92287910,92286618,92285839,92280893,92278286,92277923,92274521,92271655,92271076,92269983,92268300,92265553,92265123,92263055,92260234,92258998,92256800,92253453,92251885,92250834,92250289,92249941,92247551,92245071,92243311,92242330,92240961,92229126,92223489,92222672,92210889,92210871	Gene ID= ENSG00000196305.17 TPM= 36.11 Transcript Type= protein_coding
chr9	92297358	92325556	92297358	92325556	-	ENST00000442668.6@NOL8	ENST00000442668.6	protein_coding	92325306,92324023,92323441,92321668,92319221,92318618,92314267,92311146,92310553,92310171,92306886,92305753,92301551,92299890,92298884,92298257,92297358	92325556,92324209,92323503,92321746,92319356,92318686,92316138,92311259,92310675,92310261,92307024,92305830,92301822,92300016,92298954,92298336,92297886	Gene ID= ENSG00000198000.11 TPM= 1.06 Transcript Type= protein_coding
chr9	92305753	92325371	92305753	92325371	-	transcript1738.chr9.nic@NOL8	transcript1738.chr9.nic	protein_coding	92325318,92324023,92323441,92321668,92319221,92318618,92314267,92311146,92310553,92310171,92306886,92305753	92325371,92324209,92323503,92321746,92319356,92318686,92316138,92311259,92310675,92310261,92307024,92305830	Gene ID= ENSG00000198000.11 TPM= 4.25 Transcript Type= NA
chr9	92305753	92325371	92305753	92325371	-	transcript1743.chr9.nic@NOL8	transcript1743.chr9.nic	protein_coding	92325318,92324023,92323441,92321668,92319221,92318618,92314267,92310553,92310171,92306886,92305753	92325371,92324209,92323503,92321746,92319356,92318686,92316138,92310675,92310261,92307024,92305830	Gene ID= ENSG00000198000.11 TPM= 2.12 Transcript Type= NA
chr9	92383967	92404613	92383967	92404613	-	ENST00000375561.9@OGN	ENST00000375561.9	protein_coding	92404496,92403234,92401092,92393086,92389854,92386201,92383967	92404613,92403482,92401185,92393244,92390056,92386296,92385790	Gene ID= ENSG00000106809.10 TPM= 7.44 Transcript Type= protein_coding
chr9	92414245	92424461	92414245	92424461	-	ENST00000375550.4@OMD	ENST00000375550.4	protein_coding	92424202,92416619,92414245	92424461,92417574,92415477	Gene ID= ENSG00000127083.7 TPM= 2.12 Transcript Type= protein_coding
chr9	92456205	92482506	92456205	92482506	-	ENST00000375544.7@ASPN	ENST00000375544.7	protein_coding	92482293,92474624,92470669,92466358,92464919,92460474,92459632,92456205	92482506,92474927,92470781,92466571,92465029,92460567,92459770,92457485	Gene ID= ENSG00000106819.11 TPM= 15.93 Transcript Type= protein_coding
chr9	92456205	92482506	92456205	92482506	-	ENST00000375543.1@ASPN	ENST00000375543.1	protein_coding	92482293,92474624,92470669,92466358,92464919,92456205	92482506,92474927,92470781,92466571,92465029,92457485	Gene ID= ENSG00000106819.11 TPM= 3.19 Transcript Type= protein_coding
chr9	92495312	92536055	92495312	92536055	-	ENST00000344604.9@ECM2	ENST00000344604.9	protein_coding	92535933,92522575,92517687,92514631,92512011,92509899,92505533,92502513,92500727,92495312	92536055,92522893,92517875,92515203,92512126,92510034,92505690,92502652,92501053,92496483	Gene ID= ENSG00000106823.12 TPM= 1.06 Transcript Type= protein_coding
chr9	92613184	92670265	92613184	92670265	-	ENST00000287996.7@IPPK	ENST00000287996.7	protein_coding	92669908,92658634,92656456,92652573,92649453,92648059,92642752,92640710,92638001,92635158,92634386,92619486,92613184	92670265,92658681,92656551,92652639,92649574,92648148,92642810,92640782,92638280,92635308,92634488,92619565,92616057	Gene ID= ENSG00000127080.9 TPM= 4.25 Transcript Type= protein_coding
chr9	92635705	92670102	92635705	92670102	-	transcript1759.chr9.nic@IPPK	transcript1759.chr9.nic	protein_coding	92669908,92658634,92656456,92652573,92649453,92648059,92642752,92640710,92635705	92670102,92658681,92656551,92652639,92649574,92648148,92642810,92640782,92638280	Gene ID= ENSG00000127080.9 TPM= 3.19 Transcript Type= NA
chr9	92711363	92764812	92711363	92764812	-	ENST00000375512.3@BICD2	ENST00000375512.3	protein_coding	92764505,92729024,92722656,92720300,92718539,92717797,92715253,92711363	92764812,92729236,92722808,92720755,92719582,92717948,92715463,92713461	Gene ID= ENSG00000185963.13 TPM= 70.63 Transcript Type= protein_coding
chr9	92711363	92764812	92711363	92764812	-	ENST00000356884.10@BICD2	ENST00000356884.10	protein_coding	92764505,92729024,92722656,92720300,92718539,92717797,92711363	92764812,92729236,92722808,92720755,92719582,92717948,92715463	Gene ID= ENSG00000185963.13 TPM= 16.46 Transcript Type= protein_coding
chr9	92846069	92878008	92846069	92878008	-	ENST00000375495.7@ZNF484	ENST00000375495.7	protein_coding	92877890,92875015,92856192,92855811,92846069	92878008,92875059,92856318,92855903,92848551	Gene ID= ENSG00000127081.13 TPM= 2.12 Transcript Type= protein_coding
chr9	92947451	93036236	92947451	93036236	+	ENST00000375482.7@FGD3	ENST00000375482.7	protein_coding	92947451,92975238,92976208,93002925,93004001,93006024,93010246,93011214,93013852,93015737,93018136,93019831,93020317,93022327,93029874,93032769,93034541,93035338	92947729,92975405,92976709,93003014,93004137,93006180,93010384,93011272,93013998,93015829,93018215,93019861,93020424,93022389,93029996,93032873,93034681,93036236	Gene ID= ENSG00000127084.17 TPM= 3.19 Transcript Type= protein_coding
chr9	93096158	93113283	93096158	93113283	+	transcript1773.chr9.nic@CARD19	transcript1773.chr9.nic	protein_coding	93096158,93107674,93110568,93111879,93112992	93096352,93107827,93110721,93112289,93113283	Gene ID= ENSG00000165233.17 TPM= 4.6 Transcript Type= NA
chr9	93096222	93113283	93096222	93113283	+	transcript1774.chr9.nic@CARD19	transcript1774.chr9.nic	protein_coding	93096222,93107674,93110568,93112218,93112992	93096352,93107827,93110721,93112289,93113283	Gene ID= ENSG00000165233.17 TPM= 6.72 Transcript Type= NA
chr9	93096242	93113283	93096242	93113283	+	transcript1776.chr9.nic@CARD19	transcript1776.chr9.nic	protein_coding	93096242,93107674,93110568,93112992	93096352,93107827,93112289,93113283	Gene ID= ENSG00000165233.17 TPM= 8.32 Transcript Type= NA
chr9	93096218	93113282	93096218	93113282	+	ENST00000375464.6@CARD19	ENST00000375464.6	protein_coding	93096218,93107674,93110568,93111879,93112218,93112992	93096352,93107816,93110721,93111938,93112289,93113282	Gene ID= ENSG00000165233.17 TPM= 50.98 Transcript Type= protein_coding
chr9	93096218	93113282	93096218	93113282	+	ENST00000466409.1@CARD19	ENST00000466409.1	protein_coding	93096218,93107674,93110568,93112992	93096352,93107816,93112289,93113282	Gene ID= ENSG00000165233.17 TPM= 9.03 Transcript Type= nonsense_mediated_decay
chr9	93121489	93134288	93121489	93134288	-	ENST00000375446.4@NINJ1	ENST00000375446.4	protein_coding	93134143,93126410,93124899,93121489	93134288,93126638,93125062,93122230	Gene ID= ENSG00000131669.9 TPM= 106.22 Transcript Type= protein_coding
chr9	93184139	93232985	93184139	93232985	+	transcript1783.chr9.nnic@WNK2	transcript1783.chr9.nnic	protein_coding	93184139,93184928,93229696,93230888	93184385,93185610,93229868,93232985	Gene ID= ENSG00000165238.16 TPM= 3.19 Transcript Type= NA
chr9	93306637	93320564	93306637	93320564	+	ENST00000467401.1@WNK2	ENST00000467401.1	protein_coding	93306637,93317520,93320367	93308584,93317631,93320564	Gene ID= ENSG00000165238.16 TPM= 4.25 Transcript Type= retained_intron
chr9	93269479	93272803	93269479	93272803	+	transcript1785.chr9.nnic@NA	transcript1785.chr9.nnic	NA	93269479	93272803	Gene ID= novel_gene_chr9_1786 TPM= 2.12 Transcript Type= NA
chr9	93293324	93294972	93293324	93294972	-	transcript1789.chr9.nnic@NA	transcript1789.chr9.nnic	NA	93293324	93294972	Gene ID= novel_gene_chr9_1790 TPM= 2.12 Transcript Type= NA
chr9	93317451	93320561	93317451	93320561	+	transcript1787.chr9.nnic@NA	transcript1787.chr9.nnic	NA	93317451	93320561	Gene ID= novel_gene_chr9_1788 TPM= 4.25 Transcript Type= NA
chr9	93443311	93444836	93443311	93444836	-	transcript1825.chr9.nnic@NA	transcript1825.chr9.nnic	NA	93443311	93444836	Gene ID= novel_gene_chr9_1826 TPM= 2.12 Transcript Type= NA
chr9	93446494	93453592	93446494	93453592	-	ENST00000375412.9@FAM120AOS	ENST00000375412.9	protein_coding	93452147,93450479,93446494	93453592,93450599,93447697	Gene ID= ENSG00000188938.15 TPM= 7.79 Transcript Type= protein_coding
chr9	93446494	93451562	93446494	93451562	-	ENST00000423591.5@FAM120AOS	ENST00000423591.5	protein_coding	93451088,93450479,93446494	93451562,93450599,93447697	Gene ID= ENSG00000188938.15 TPM= 26.37 Transcript Type= protein_coding
chr9	93446494	93451524	93446494	93451524	-	ENST00000479094.5@FAM120AOS	ENST00000479094.5	protein_coding	93450945,93450479,93446494	93451524,93450599,93447697	Gene ID= ENSG00000188938.15 TPM= 5.13 Transcript Type= processed_transcript
chr9	93499278	93500520	93499278	93500520	-	transcript1823.chr9.nnic@NA	transcript1823.chr9.nnic	NA	93499278	93500520	Gene ID= novel_gene_chr9_1824 TPM= 3.19 Transcript Type= NA
chr9	93572784	93574949	93572784	93574949	+	transcript1827.chr9.nnic@NA	transcript1827.chr9.nnic	NA	93572784	93574949	Gene ID= novel_gene_chr9_1828 TPM= 11.68 Transcript Type= NA
chr9	93576407	93679587	93576407	93679587	+	ENST00000359246.8@PHF2	ENST00000359246.8	protein_coding	93576407,93629970,93636411,93645629,93649071,93653179,93654413,93655934,93656489,93658145,93659511,93660192,93662907,93663517,93665686,93665990,93667080,93673585,93674927,93675680,93676594,93677588	93576871,93630055,93636525,93645789,93649212,93653365,93654575,93656021,93656595,93658236,93659600,93660560,93663026,93663635,93665864,93666060,93667240,93673862,93675022,93675789,93676963,93679587	Gene ID= ENSG00000197724.10 TPM= 33.99 Transcript Type= protein_coding
chr9	93663911	93666950	93663911	93666950	+	transcript1833.chr9.nnic@NA	transcript1833.chr9.nnic	NA	93663911	93666950	Gene ID= novel_gene_chr9_1834 TPM= 2.12 Transcript Type= NA
chr9	94030782	94109852	94030782	94109852	+	transcript1835.chr9.nnic@PTPDC1	transcript1835.chr9.nnic	protein_coding	94030782,94057118,94057269,94064734,94085251,94087831,94088145,94095317,94097321,94101566,94104275,94107828	94031127,94057179,94057361,94064821,94085422,94087911,94088263,94095454,94098579,94101751,94104385,94109852	Gene ID= ENSG00000158079.14 TPM= 3.19 Transcript Type= NA
chr9	94030794	94109856	94030794	94109856	+	ENST00000375360.7@PTPDC1	ENST00000375360.7	protein_coding	94030794,94064734,94085251,94087831,94088145,94095317,94097321,94101566,94104275,94107828	94031127,94064821,94085422,94087911,94088263,94095454,94098579,94101751,94104385,94109856	Gene ID= ENSG00000158079.14 TPM= 5.31 Transcript Type= protein_coding
chr9	94374541	94460920	94374541	94460920	+	transcript1846.chr9.nnic@MFSD14B	transcript1846.chr9.nnic	protein_coding	94374541,94415158,94429189,94438401,94440985,94444964,94446823,94451456,94453958,94458322,94459161	94374927,94415253,94429251,94438528,94441099,94445182,94446936,94451527,94454070,94458464,94460920	Gene ID= ENSG00000148110.15 TPM= 9.03 Transcript Type= NA
chr9	94374447	94460920	94374447	94460920	+	transcript1848.chr9.nnic@MFSD14B	transcript1848.chr9.nnic	protein_coding	94374447,94415158,94429189,94438401,94444964,94446823,94451456,94453958,94456240,94458322,94459161	94374927,94415253,94429251,94438528,94445182,94446936,94451527,94454070,94456337,94458464,94460920	Gene ID= ENSG00000148110.15 TPM= 13.28 Transcript Type= NA
chr9	94555069	94568127	94555069	94568127	+	ENST00000452148.2@PCAT7	ENST00000452148.2	antisense_RNA	94555069,94558969,94567390	94555310,94559152,94568127	Gene ID= ENSG00000231806.2 TPM= 1.06 Transcript Type= retained_intron
chr9	95003984	95087159	95003984	95087159	+	transcript1863.chr9.nic@C9orf3	transcript1863.chr9.nic	protein_coding	95003984,95005158,95005542,95060694,95080694,95082575,95086682	95004286,95005220,95005616,95060810,95080780,95082719,95087159	Gene ID= ENSG00000148120.16 TPM= 24.08 Transcript Type= NA
chr9	95004951	95087159	95004951	95087159	+	transcript1873.chr9.nic@C9orf3	transcript1873.chr9.nic	protein_coding	95004951,95005158,95005542,95060694,95080694,95082575,95086682	95005065,95005220,95005616,95060810,95080780,95082719,95087159	Gene ID= ENSG00000148120.16 TPM= 68.33 Transcript Type= NA
chr9	95004207	95084335	95004207	95084335	+	transcript1877.chr9.nic@C9orf3	transcript1877.chr9.nic	protein_coding	95004207,95005158,95005542,95060694,95080694,95082575	95004286,95005220,95005616,95060810,95080780,95084335	Gene ID= ENSG00000148120.16 TPM= 50.98 Transcript Type= NA
chr9	95004147	95087159	95004147	95087159	+	transcript1878.chr9.nic@C9orf3	transcript1878.chr9.nic	protein_coding	95004147,95005158,95005542,95060694,95080694,95086682	95004286,95005220,95005616,95060810,95080780,95087159	Gene ID= ENSG00000148120.16 TPM= 26.95 Transcript Type= NA
chr9	95004951	95020626	95004951	95020626	+	transcript1904.chr9.nic@C9orf3	transcript1904.chr9.nic	protein_coding	95004951,95005158,95005542,95019450	95005065,95005220,95005616,95020626	Gene ID= ENSG00000148120.16 TPM= 13.81 Transcript Type= NA
chr9	95005013	95022277	95005013	95022277	+	ENST00000496567.5@C9orf3	ENST00000496567.5	protein_coding	95005013,95005158,95005542,95019450,95021678	95005065,95005220,95005616,95020233,95022277	Gene ID= ENSG00000148120.16 TPM= 2.12 Transcript Type= processed_transcript
chr9	95004996	95083035	95004996	95083035	+	ENST00000445181.5@C9orf3	ENST00000445181.5	protein_coding	95004996,95005158,95005542,95060694,95080694,95082575	95005065,95005220,95005616,95060810,95080780,95083035	Gene ID= ENSG00000148120.16 TPM= 3.19 Transcript Type= protein_coding
chr9	95011687	95014311	95011687	95014311	+	transcript1915.chr9.nnic@NA	transcript1915.chr9.nnic	NA	95011687	95014311	Gene ID= novel_gene_chr9_1916 TPM= 3.19 Transcript Type= NA
chr9	95013408	95016148	95013408	95016148	-	transcript1923.chr9.nnic@NA	transcript1923.chr9.nnic	NA	95013408	95016148	Gene ID= novel_gene_chr9_1924 TPM= 11.68 Transcript Type= NA
chr9	95016131	95019525	95016131	95019525	-	transcript1921.chr9.nnic@NA	transcript1921.chr9.nnic	NA	95016131	95019525	Gene ID= novel_gene_chr9_1922 TPM= 10.62 Transcript Type= NA
chr9	95036704	95038415	95036704	95038415	-	transcript1929.chr9.nnic@NA	transcript1929.chr9.nnic	NA	95036704	95038415	Gene ID= novel_gene_chr9_1930 TPM= 3.19 Transcript Type= NA
chr9	95071925	95073702	95071925	95073702	+	transcript1919.chr9.nnic@NA	transcript1919.chr9.nnic	NA	95071925	95073702	Gene ID= novel_gene_chr9_1920 TPM= 2.12 Transcript Type= NA
chr9	95078041	95080527	95078041	95080527	+	transcript1917.chr9.nnic@NA	transcript1917.chr9.nnic	NA	95078041	95080527	Gene ID= novel_gene_chr9_1918 TPM= 5.31 Transcript Type= NA
chr9	95084880	95087158	95084880	95087158	+	transcript1913.chr9.nnic@NA	transcript1913.chr9.nnic	NA	95084880	95087158	Gene ID= novel_gene_chr9_1914 TPM= 13.81 Transcript Type= NA
chr9	95124901	95125027	95124901	95125027	+	transcript1933.chr9.nnic@NA	transcript1933.chr9.nnic	NA	95124901	95125027	Gene ID= novel_gene_chr9_1934 TPM= 2.12 Transcript Type= NA
chr9	95507641	95509047	95507641	95509047	-	transcript1935.chr9.nnic@NA	transcript1935.chr9.nnic	NA	95507641	95509047	Gene ID= novel_gene_chr9_1936 TPM= 2.12 Transcript Type= NA
chr9	95875616	95972398	95875616	95972398	+	transcript1939.chr9.nic@ERCC6L2	transcript1939.chr9.nic	protein_coding	95875616,95880869,95897849,95907078,95915668,95916227,95921175,95922305,95923260,95928079,95928719,95941454,95955914,95966562,95970576,95971933	95876084,95881293,95897971,95907271,95915829,95916434,95921315,95922418,95923379,95928150,95928864,95941549,95956013,95966714,95970656,95972398	Gene ID= ENSG00000182150.15 TPM= 7.44 Transcript Type= NA
chr9	95875616	95882647	95875616	95882647	+	transcript1943.chr9.nic@ERCC6L2	transcript1943.chr9.nic	protein_coding	95875616,95880869	95876084,95882647	Gene ID= ENSG00000182150.15 TPM= 3.19 Transcript Type= NA
chr9	95975514	95976375	95975514	95976375	-	transcript1946.chr9.nnic@NA	transcript1946.chr9.nnic	NA	95975514	95976375	Gene ID= novel_gene_chr9_1947 TPM= 2.12 Transcript Type= NA
chr9	96350348	96383725	96350348	96383725	-	transcript1957.chr9.nic@SLC35D2	transcript1957.chr9.nic	protein_coding	96383477,96368272,96364464,96360154,96350348	96383725,96368305,96364550,96360221,96352109	Gene ID= ENSG00000130958.11 TPM= 2.12 Transcript Type= NA
chr9	96320706	96383697	96320706	96383697	-	ENST00000253270.11@SLC35D2	ENST00000253270.11	protein_coding	96383477,96368272,96364464,96360154,96352038,96351103,96345299,96343904,96336717,96324091,96321998,96320706	96383697,96368305,96364550,96360221,96352109,96351171,96345401,96343996,96336784,96324169,96322080,96321341	Gene ID= ENSG00000130958.11 TPM= 12.75 Transcript Type= protein_coding
chr9	96450178	96490505	96450178	96490505	+	transcript1966.chr9.nnic@HABP4	transcript1966.chr9.nnic	protein_coding	96450178,96458379,96465337,96465710,96471011,96484462,96488089,96489982	96450628,96458541,96465498,96465778,96471094,96484659,96488274,96490505	Gene ID= ENSG00000130956.13 TPM= 4.25 Transcript Type= NA
chr9	96450205	96491336	96450205	96491336	+	ENST00000375249.4@HABP4	ENST00000375249.4	protein_coding	96450205,96458379,96465337,96465710,96471011,96484462,96488089,96489982	96450628,96458541,96465498,96465778,96471094,96484633,96488274,96491336	Gene ID= ENSG00000130956.13 TPM= 4.25 Transcript Type= protein_coding
chr9	96639577	96654906	96639577	96654906	-	transcript1987.chr9.nic@AAED1	transcript1987.chr9.nic	protein_coding	96654705,96651659,96651390,96645893,96639577	96654906,96651712,96651495,96646024,96641886	Gene ID= ENSG00000158122.11 TPM= 8.5 Transcript Type= NA
chr9	96641254	96655337	96641254	96655337	-	transcript1988.chr9.nic@AAED1	transcript1988.chr9.nic	protein_coding	96655090,96654705,96651659,96651390,96641254	96655337,96654773,96651712,96651495,96641886	Gene ID= ENSG00000158122.11 TPM= 7.44 Transcript Type= NA
chr9	96942913	97013600	96942913	97013600	-	ENST00000637864.1@MFSD14C	ENST00000637864.1	protein_coding	97013259,96972853,96958835,96949555,96942913	97013600,96972948,96958897,96949682,96944085	Gene ID= ENSG00000196312.12 TPM= 5.31 Transcript Type= protein_coding
chr9	97411950	97496125	97411950	97496125	+	ENST00000355295.4@TDRD7	ENST00000355295.4	protein_coding	97411950,97428460,97430933,97432025,97439245,97441658,97460178,97464842,97470558,97472293,97473492,97475383,97478439,97480828,97482849,97487172,97495663	97412238,97428672,97431074,97432238,97439318,97441875,97460764,97465028,97470669,97472495,97473626,97475469,97478573,97480938,97483351,97487332,97496125	Gene ID= ENSG00000196116.7 TPM= 8.5 Transcript Type= protein_coding
chr9	97411992	97496125	97411992	97496125	+	transcript2003.chr9.nnic@TDRD7	transcript2003.chr9.nnic	protein_coding	97411992,97430933,97432025,97439245,97441658,97460178,97464842,97470558,97472293,97473492,97475383,97478439,97480828,97482849,97487172,97495663	97412238,97431074,97432238,97439318,97441875,97460764,97465028,97470669,97472495,97473626,97475469,97478573,97480938,97483351,97487332,97496125	Gene ID= ENSG00000196116.7 TPM= 15.93 Transcript Type= NA
chr9	97501666	97601254	97501666	97601254	+	transcript2016.chr9.nnic@TMOD1	transcript2016.chr9.nnic	protein_coding	97501666,97524141,97546185,97547249,97553281,97562732,97564038,97565848,97568894,97591291,97599634	97501803,97524308,97546341,97547371,97553400,97562821,97564168,97565955,97569037,97591435,97601254	Gene ID= ENSG00000136842.13 TPM= 16.5 Transcript Type= NA
chr9	97501639	97601748	97501639	97601748	+	ENST00000259365.8@TMOD1	ENST00000259365.8	protein_coding	97501639,97524141,97546185,97553281,97562732,97564038,97565848,97568894,97591291,97599634	97501803,97524308,97546341,97553400,97562821,97564168,97565955,97569037,97591435,97601748	Gene ID= ENSG00000136842.13 TPM= 38.8 Transcript Type= protein_coding
chr9	97554747	97557883	97554747	97557883	+	transcript2050.chr9.nnic@NA	transcript2050.chr9.nnic	NA	97554747	97557883	Gene ID= novel_gene_chr9_2051 TPM= 4.25 Transcript Type= NA
chr9	97600083	97633575	97600083	97633575	-	ENST00000341170.4@TSTD2	ENST00000341170.4	protein_coding	97633243,97627398,97625681,97617757,97611574,97610346,97606143,97605483,97604727,97600083	97633575,97627612,97625997,97617877,97611699,97610451,97606261,97605641,97604865,97602767	Gene ID= ENSG00000136925.14 TPM= 21.24 Transcript Type= protein_coding
chr9	97654398	97697318	97654398	97697318	-	transcript2036.chr9.nnic@XPA	transcript2036.chr9.nnic	protein_coding	97697121,97693649,97689534,97687096,97684923,97675489,97654398	97697318,97693759,97689639,97687261,97685040,97675587,97654724	Gene ID= ENSG00000136936.10 TPM= 2.12 Transcript Type= NA
chr9	97674909	97697321	97674909	97697321	-	transcript2042.chr9.nic@XPA	transcript2042.chr9.nic	protein_coding	97697224,97693649,97689534,97687096,97684923,97674909	97697321,97693759,97689639,97687261,97685040,97675587	Gene ID= ENSG00000136936.10 TPM= 2.12 Transcript Type= NA
chr9	97674909	97697357	97674909	97697357	-	ENST00000375128.4@XPA	ENST00000375128.4	protein_coding	97697121,97693649,97689534,97687096,97684923,97674909	97697357,97693759,97689639,97687261,97685040,97675587	Gene ID= ENSG00000136936.10 TPM= 6.37 Transcript Type= protein_coding
chr9	97904489	97922570	97904489	97922570	-	ENST00000375119.7@TRMO	ENST00000375119.7	protein_coding	97922418,97916164,97913401,97909960,97904489	97922570,97916338,97913558,97910616,97904992	Gene ID= ENSG00000136932.13 TPM= 5.31 Transcript Type= protein_coding
chr9	97983361	98015943	97983361	98015943	+	ENST00000339399.4@ANP32B	ENST00000339399.4	protein_coding	97983361,97994631,97998556,98004964,98011271,98012421,98015364	97983609,97994780,97998678,98005153,98011389,98012472,98015943	Gene ID= ENSG00000136938.8 TPM= 14.87 Transcript Type= protein_coding
chr9	98056739	98083075	98056739	98083075	+	ENST00000210444.5@NANS	ENST00000210444.5	protein_coding	98056739,98060782,98076918,98078193,98080816,98082846	98056940,98060997,98077017,98078347,98081082,98083075	Gene ID= ENSG00000095380.10 TPM= 55.23 Transcript Type= protein_coding
chr9	98198999	98255721	98198999	98255721	-	ENST00000465784.6@TBC1D2	ENST00000465784.6	protein_coding	98255173,98251785,98243994,98233416,98228952,98220833,98213108,98210656,98208668,98203288,98201479,98200253,98198999	98255721,98251926,98244129,98233549,98229148,98221228,98213218,98210843,98209144,98203408,98201664,98200374,98199588	Gene ID= ENSG00000095383.19 TPM= 4.25 Transcript Type= protein_coding
chr9	98249068	98251301	98249068	98251301	+	transcript2073.chr9.nnic@NA	transcript2073.chr9.nnic	NA	98249068	98251301	Gene ID= novel_gene_chr9_2074 TPM= 2.12 Transcript Type= NA
chr9	98732013	98796549	98732013	98796549	-	transcript2075.chr9.nic@ANKS6	transcript2075.chr9.nic	protein_coding	98796133,98790104,98784832,98783953,98782467,98780189,98778226,98777405,98773877,98770896,98768081,98756420,98751029,98745559,98736527,98732013	98796549,98790606,98784876,98784157,98782573,98780337,98778424,98777454,98774080,98771046,98768250,98756606,98751096,98745675,98736623,98732553	Gene ID= ENSG00000165138.17 TPM= 2.12 Transcript Type= NA
chr9	98783567	98796549	98783567	98796549	-	transcript2081.chr9.nic@ANKS6	transcript2081.chr9.nic	protein_coding	98796133,98790104,98784832,98783567	98796549,98790606,98784876,98784157	Gene ID= ENSG00000165138.17 TPM= 2.12 Transcript Type= NA
chr9	98790657	98793553	98790657	98793553	+	transcript2083.chr9.nnic@NA	transcript2083.chr9.nnic	NA	98790657	98793553	Gene ID= novel_gene_chr9_2084 TPM= 2.12 Transcript Type= NA
chr9	98943639	99070792	98943639	99070792	+	ENST00000375001.7@COL15A1	ENST00000375001.7	protein_coding	98943639,98944162,98985565,98987294,98989178,98996934,99000839,99003453,99004898,99015417,99015976,99020389,99022091,99023357,99024874,99025904,99034549,99035014,99035350,99036170,99036313,99038668,99040521,99042045,99044568,99044735,99047786,99047941,99049690,99049854,99052388,99054576,99055102,99055262,99056260,99059889,99061971,99062245,99063050,99066882,99068555,99069673	98944072,98944250,98986112,98987368,98989258,98997081,99000951,99003587,99005050,99015566,99016119,99020442,99022150,99023449,99024999,99025966,99034584,99035154,99035418,99036205,99036396,99038733,99040556,99042107,99044636,99044770,99047839,99048000,99049758,99049895,99052433,99054656,99055151,99055372,99056404,99059953,99062099,99062304,99063109,99067067,99068670,99070792	Gene ID= ENSG00000204291.10 TPM= 35.05 Transcript Type= protein_coding
chr9	99025628	99027505	99025628	99027505	+	transcript2095.chr9.nnic@NA	transcript2095.chr9.nnic	NA	99025628	99027505	Gene ID= novel_gene_chr9_2096 TPM= 2.12 Transcript Type= NA
chr9	99105150	99153658	99105150	99153658	+	ENST00000552516.5@TGFBR1	ENST00000552516.5	protein_coding	99105150,99128855,99132497,99137859,99142536,99144732,99146485,99147654,99149180	99105302,99129100,99132739,99138089,99142703,99144888,99146609,99147784,99153658	Gene ID= ENSG00000106799.12 TPM= 18.06 Transcript Type= protein_coding
chr9	99217372	99221140	99217372	99221140	-	ENST00000319033.7@ALG2	ENST00000319033.7	protein_coding	99220979,99217372	99221140,99218836	Gene ID= ENSG00000119523.9 TPM= 2.12 Transcript Type= protein_coding
chr9	99217367	99221956	99217367	99221956	-	ENST00000476832.1@ALG2	ENST00000476832.1	protein_coding	99221547,99217367	99221956,99218836	Gene ID= ENSG00000119523.9 TPM= 11.68 Transcript Type= protein_coding
chr9	99222301	99230615	99222301	99230615	+	ENST00000223641.4@SEC61B	ENST00000223641.4	protein_coding	99222301,99222546,99227899,99230337	99222366,99222643,99228000,99230615	Gene ID= ENSG00000106803.9 TPM= 39.3 Transcript Type= protein_coding
chr9	99810147	99817022	99810147	99817022	+	transcript2111.chr9.nnic@NA	transcript2111.chr9.nnic	NA	99810147	99817022	Gene ID= novel_gene_chr9_2112 TPM= 3.19 Transcript Type= NA
chr9	99906633	99970341	99906633	99970341	+	ENST00000259400.10@STX17	ENST00000259400.10	protein_coding	99906633,99915178,99928778,99951060,99959917,99960105,99967653,99968434	99906706,99915362,99928843,99951285,99960032,99960155,99967739,99970341	Gene ID= ENSG00000136874.10 TPM= 3.19 Transcript Type= protein_coding
chr9	99968432	99973203	99968432	99973203	+	transcript2117.chr9.nnic@NA	transcript2117.chr9.nnic	NA	99968432	99973203	Gene ID= novel_gene_chr9_2118 TPM= 3.19 Transcript Type= NA
chr9	99979179	100099040	99979179	100099040	-	ENST00000262455.6@ERP44	ENST00000262455.6	protein_coding	100098784,100060100,100057820,100052417,100022042,100020616,100018256,100016322,100007578,100006506,99984967,99979179	100099040,100060172,100057859,100052532,100022226,100020731,100018313,100016438,100007689,100006647,99985069,99982713	Gene ID= ENSG00000023318.7 TPM= 5.31 Transcript Type= protein_coding
chr9	100302084	100352939	100302084	100352939	-	ENST00000374902.8@TEX10	ENST00000374902.8	protein_coding	100352772,100349184,100346694,100346072,100340257,100329931,100329140,100327787,100326302,100321683,100320265,100310299,100308500,100303632,100302084	100352939,100349372,100347406,100346315,100340369,100330169,100329275,100327962,100326479,100321771,100320398,100310379,100308681,100303842,100302304	Gene ID= ENSG00000136891.13 TPM= 21.24 Transcript Type= protein_coding
chr9	100427156	100451229	100427156	100451229	+	ENST00000395067.6@MSANTD3	ENST00000395067.6	protein_coding	100427156,100441906,100450557	100427393,100442356,100451229	Gene ID= ENSG00000066697.14 TPM= 32.4 Transcript Type= protein_coding
chr9	100578079	100580290	100578079	100580290	+	transcript2158.chr9.nnic@NA	transcript2158.chr9.nnic	NA	100578079	100580290	Gene ID= novel_gene_chr9_2159 TPM= 2.12 Transcript Type= NA
chr9	100578079	100587906	100578079	100587906	+	ENST00000307584.5@CAVIN4	ENST00000307584.5	protein_coding	100578079,100585765	100578551,100587906	Gene ID= ENSG00000170681.6 TPM= 193.31 Transcript Type= protein_coding
chr9	100586680	100590018	100586680	100590018	+	transcript2156.chr9.nnic@NA	transcript2156.chr9.nnic	NA	100586680	100590018	Gene ID= novel_gene_chr9_2157 TPM= 4.25 Transcript Type= NA
chr9	101387633	101398614	101387633	101398614	-	ENST00000374865.4@MRPL50	ENST00000374865.4	protein_coding	101398501,101387633	101398614,101390850	Gene ID= ENSG00000136897.7 TPM= 10.62 Transcript Type= protein_coding
chr9	101474988	101486884	101474988	101486884	-	transcript2169.chr9.nnic@TMEM246	transcript2169.chr9.nnic	protein_coding	101486568,101474988	101486884,101477169	Gene ID= ENSG00000165152.8 TPM= 16.99 Transcript Type= NA
chr9	101475331	101486788	101475331	101486788	-	transcript2172.chr9.nnic@TMEM246	transcript2172.chr9.nnic	protein_coding	101486568,101475331	101486788,101477169	Gene ID= ENSG00000165152.8 TPM= 3.19 Transcript Type= NA
chr9	101473171	101487193	101473171	101487193	-	ENST00000374848.7@TMEM246	ENST00000374848.7	protein_coding	101486949,101473171	101487193,101477169	Gene ID= ENSG00000165152.8 TPM= 12.75 Transcript Type= protein_coding
chr9	101533846	101552714	101533846	101552714	+	transcript2181.chr9.nic@RNF20	transcript2181.chr9.nic	protein_coding	101533846,101535398,101540203,101540490,101540793,101544767,101546820,101547137,101547399,101550606,101551684,101552141,101552383	101533914,101535552,101540370,101540637,101540975,101544885,101546966,101547214,101547518,101550785,101551819,101552262,101552714	Gene ID= ENSG00000155827.11 TPM= 6.37 Transcript Type= NA
chr9	101533851	101563344	101533851	101563344	+	ENST00000389120.7@RNF20	ENST00000389120.7	protein_coding	101533851,101535398,101540203,101540490,101540793,101544767,101546820,101547137,101547399,101550606,101551684,101552141,101552383,101553988,101554694,101557384,101560801,101561090,101561910,101562246	101533914,101535552,101540370,101540637,101540975,101544885,101546966,101547214,101547518,101550785,101551819,101552262,101552753,101554105,101554843,101557596,101560926,101561230,101562011,101563344	Gene ID= ENSG00000155827.11 TPM= 49.92 Transcript Type= protein_coding
chr9	104092403	104093987	104092403	104093987	-	transcript2190.chr9.nnic@NA	transcript2190.chr9.nnic	NA	104092403	104093987	Gene ID= novel_gene_chr9_2191 TPM= 2.12 Transcript Type= NA
chr9	104094564	104139651	104094564	104139651	+	ENST00000374787.7@SMC2	ENST00000374787.7	protein_coding	104094564,104095324,104096148,104098446,104099644,104100093,104100389,104101960,104102424,104111581,104113316,104113964,104114691,104116200,104118171,104120027,104123108,104124912,104126641,104127286,104129645,104132009,104134415,104138018,104139139	104094838,104095552,104096297,104098568,104099682,104100203,104100433,104102193,104102573,104111814,104113475,104114081,104114829,104116319,104118375,104120162,104123232,104125105,104126784,104127480,104129845,104132125,104134575,104138165,104139651	Gene ID= ENSG00000136824.18 TPM= 4.25 Transcript Type= protein_coding
chr9	104094250	104102193	104094250	104102193	+	transcript2200.chr9.nnic@SMC2	transcript2200.chr9.nnic	protein_coding	104094250,104095324,104096148,104098446,104099644,104100093,104100389,104101960	104094448,104095552,104096297,104098568,104099682,104100203,104100433,104102193	Gene ID= ENSG00000136824.18 TPM= 2.12 Transcript Type= NA
chr9	104747688	104760122	104747688	104760122	+	ENST00000374767.4@NIPSNAP3A	ENST00000374767.4	protein_coding	104747688,104750956,104752906,104754551,104759085,104759262	104747852,104751166,104753064,104754700,104759171,104760122	Gene ID= ENSG00000136783.9 TPM= 52.05 Transcript Type= protein_coding
chr9	104764132	104777764	104764132	104777764	+	transcript2204.chr9.nic@NIPSNAP3B	transcript2204.chr9.nic	protein_coding	104764132,104766325,104768863,104770849,104772822,104772997,104777128	104764300,104766535,104769021,104770998,104772908,104773176,104777764	Gene ID= ENSG00000165028.11 TPM= 3.19 Transcript Type= NA
chr9	104763782	104777764	104763782	104777764	+	transcript2212.chr9.nic@NIPSNAP3B	transcript2212.chr9.nic	protein_coding	104763782,104768863,104770849,104772822,104772997,104777128	104764300,104769021,104770998,104772908,104773176,104777764	Gene ID= ENSG00000165028.11 TPM= 3.19 Transcript Type= NA
chr9	104764170	104774010	104764170	104774010	+	ENST00000374762.3@NIPSNAP3B	ENST00000374762.3	protein_coding	104764170,104766325,104768863,104770849,104772822,104772997	104764300,104766535,104769021,104770998,104772908,104774010	Gene ID= ENSG00000165028.11 TPM= 6.37 Transcript Type= protein_coding
chr9	104922910	104926481	104922910	104926481	+	transcript2217.chr9.nnic@NA	transcript2217.chr9.nnic	NA	104922910	104926481	Gene ID= novel_gene_chr9_2218 TPM= 7.44 Transcript Type= NA
chr9	105244652	105438504	105244652	105438504	+	transcript2229.chr9.nnic@SLC44A1	transcript2229.chr9.nnic	protein_coding	105244652,105299220,105335563,105348358,105356212,105358344,105361191,105362821,105364555,105365483,105366346,105374598,105383123,105385422,105438281	105244904,105299309,105335699,105348451,105356381,105358433,105361330,105363007,105364720,105365639,105366429,105374735,105383359,105385502,105438504	Gene ID= ENSG00000070214.15 TPM= 5.31 Transcript Type= NA
chr9	105546715	105550762	105546715	105550762	+	transcript2235.chr9.nnic@NA	transcript2235.chr9.nnic	NA	105546715	105550762	Gene ID= novel_gene_chr9_2236 TPM= 2.12 Transcript Type= NA
chr9	105558130	105641118	105558130	105641118	+	ENST00000223528.6@FKTN	ENST00000223528.6	protein_coding	105558130,105574945,105596598,105601145,105604215,105607819,105615278,105617959,105619934,105635051	105558165,105575137,105596657,105601348,105604492,105607951,105615407,105618092,105620061,105641118	Gene ID= ENSG00000106692.13 TPM= 2.12 Transcript Type= protein_coding
chr9	105694522	105775816	105694522	105775816	+	transcript2243.chr9.nnic@TMEM38B	transcript2243.chr9.nnic	protein_coding	105694522,105705597,105721537,105722534,105744612,105748073,105773865	105694772,105705753,105721721,105722621,105744639,105748190,105775816	Gene ID= ENSG00000095209.11 TPM= 6.55 Transcript Type= NA
chr9	105694522	105775813	105694522	105775813	+	transcript2247.chr9.nic@TMEM38B	transcript2247.chr9.nic	protein_coding	105694522,105705597,105721537,105722534,105748073,105749073,105773865	105694772,105705753,105721721,105722621,105748190,105749111,105775813	Gene ID= ENSG00000095209.11 TPM= 3.37 Transcript Type= NA
chr9	105694544	105776612	105694544	105776612	+	ENST00000374692.7@TMEM38B	ENST00000374692.7	protein_coding	105694544,105705597,105721537,105722534,105748073,105773865	105694772,105705753,105721721,105722621,105748190,105776612	Gene ID= ENSG00000095209.11 TPM= 4.43 Transcript Type= protein_coding
chr9	105694522	105775797	105694522	105775797	+	transcript2257.chr9.nnic@TMEM38B	transcript2257.chr9.nnic	protein_coding	105694522,105705597,105721537,105722534,105773865	105694772,105705753,105721721,105722621,105775797	Gene ID= ENSG00000095209.11 TPM= 2.3 Transcript Type= NA
chr9	105705904	105708540	105705904	105708540	-	transcript2262.chr9.nnic@NA	transcript2262.chr9.nnic	NA	105705904	105708540	Gene ID= novel_gene_chr9_2263 TPM= 4.25 Transcript Type= NA
chr9	106864206	106868086	106864206	106868086	+	transcript2264.chr9.nnic@NA	transcript2264.chr9.nnic	NA	106864206	106868086	Gene ID= novel_gene_chr9_2265 TPM= 2.12 Transcript Type= NA
chr9	106927264	107011508	106927264	107011508	+	ENST00000374686.6@ZNF462	ENST00000374686.6	protein_coding	106927264,106930525,106932266,106935503,106938916,106972005,106974137,106984186,107003294,107009545,107010823	106929759,106930689,106932549,106935621,106939107,106972272,106974273,106984409,107003426,107009668,107011508	Gene ID= ENSG00000148143.12 TPM= 2.12 Transcript Type= protein_coding
chr9	107283256	107324979	107283256	107324979	+	transcript2271.chr9.nic@RAD23B	transcript2271.chr9.nic	protein_coding	107283256,107300141,107302035,107306379,107311682,107318752,107321983,107323890,107324834	107283695,107300222,107302114,107306647,107311737,107318879,107322118,107324017,107324979	Gene ID= ENSG00000119318.12 TPM= 7.44 Transcript Type= NA
chr9	107283279	107284504	107283279	107284504	+	transcript2277.chr9.nnic@NA	transcript2277.chr9.nnic	NA	107283279	107284504	Gene ID= novel_gene_chr9_2278 TPM= 3.19 Transcript Type= NA
chr9	107330217	107330892	107330217	107330892	+	transcript2275.chr9.nnic@NA	transcript2275.chr9.nnic	NA	107330217	107330892	Gene ID= novel_gene_chr9_2276 TPM= 5.31 Transcript Type= NA
chr9	107484852	107489437	107484852	107489437	-	ENST00000493306.1@KLF4	ENST00000493306.1	protein_coding	107489168,107488930,107487028,107484852	107489437,107489050,107488267,107485926	Gene ID= ENSG00000136826.14 TPM= 3.19 Transcript Type= retained_intron
chr9	107484852	107489646	107484852	107489646	-	ENST00000374672.4@KLF4	ENST00000374672.4	protein_coding	107489168,107488930,107487295,107487028,107484852	107489646,107489050,107488267,107487192,107485926	Gene ID= ENSG00000136826.14 TPM= 12.75 Transcript Type= protein_coding
chr9	108868641	108934340	108868641	108934340	-	transcript2288.chr9.nnic@ELP1	transcript2288.chr9.nnic	protein_coding	108933864,108930997,108929769,108927372,108926523,108922842,108919253,108918811,108917547,108916204,108912264,108911010,108908305,108906303,108903563,108902839,108901628,108901425,108900260,108899822,108898671,108898502,108897148,108896953,108896496,108893943,108892986,108891203,108889332,108882125,108881705,108880052,108879446,108878623,108877995,108874895,108868641	108934340,108931056,108929921,108927453,108926603,108922927,108919349,108918901,108917670,108916297,108912494,108911180,108908404,108906485,108903669,108902942,108901681,108901530,108900375,108899895,108898749,108898581,108897285,108897038,108896644,108894066,108893083,108891404,108889393,108882187,108881765,108880165,108879557,108878750,108878149,108874970,108869182	Gene ID= ENSG00000070061.14 TPM= 6.37 Transcript Type= NA
chr9	108934131	108940968	108934131	108940968	+	transcript2308.chr9.nnic@FAM206A	transcript2308.chr9.nnic	protein_coding	108934131,108935638,108939196,108939385,108939549	108934565,108935689,108939272,108939454,108940968	Gene ID= ENSG00000119328.11 TPM= 4.25 Transcript Type= NA
chr9	108934181	108940968	108934181	108940968	+	ENST00000322940.10@FAM206A	ENST00000322940.10	protein_coding	108934181,108935638,108936308,108939196,108939385,108939549	108934565,108935689,108936437,108939272,108939454,108940968	Gene ID= ENSG00000119328.11 TPM= 14.87 Transcript Type= protein_coding
chr9	108990725	109013582	108990725	109013582	-	transcript2310.chr9.nic@CTNNAL1	transcript2310.chr9.nic	protein_coding	109013302,108999067,108992632,108990725	109013582,108999256,108992819,108990845	Gene ID= ENSG00000119326.14 TPM= 46.74 Transcript Type= NA
chr9	108942571	109013529	108942571	109013529	-	ENST00000325551.8@CTNNAL1	ENST00000325551.8	protein_coding	109013302,108999067,108992632,108990726,108984347,108983145,108979281,108976962,108972675,108970402,108965378,108955790,108952444,108952209,108948186,108943962,108943703,108942961,108942571	109013529,108999256,108992819,108990845,108984436,108983315,108979481,108977048,108972833,108970494,108965528,108955827,108952494,108952363,108948234,108944018,108943816,108943044,108942834	Gene ID= ENSG00000119326.14 TPM= 177.38 Transcript Type= protein_coding
chr9	108942569	109013522	108942569	109013522	-	ENST00000374595.8@CTNNAL1	ENST00000374595.8	protein_coding	109013302,108999067,108992632,108990726,108984347,108983145,108979281,108976962,108972675,108970402,108965378,108955790,108952444,108952209,108948186,108943962,108943703,108942961,108942569	109013522,108999256,108992819,108990845,108984436,108983315,108979481,108977048,108972833,108970494,108965528,108955827,108952494,108952363,108948234,108944018,108943816,108943044,108942871	Gene ID= ENSG00000119326.14 TPM= 5.31 Transcript Type= protein_coding
chr9	109018926	109119968	109018926	109119968	-	transcript2321.chr9.nnic@TMEM245	transcript2321.chr9.nnic	protein_coding	109119335,109108453,109106508,109090922,109087173,109085997,109080839,109073356,109064477,109060354,109057191,109050570,109050283,109038017,109036206,109033307,109018926	109119968,109108570,109106609,109091155,109087342,109086020,109080943,109073438,109064567,109060452,109057322,109050692,109050428,109038117,109036380,109033501,109020505	Gene ID= ENSG00000106771.12 TPM= 43.55 Transcript Type= NA
chr9	109018926	109119938	109018926	109119938	-	transcript2326.chr9.nnic@TMEM245	transcript2326.chr9.nnic	protein_coding	109119335,109108453,109106508,109090922,109087173,109085997,109073356,109064477,109060354,109057191,109050570,109050283,109038017,109036206,109033307,109018926	109119938,109108570,109106609,109091155,109087342,109086020,109073438,109064567,109060452,109057322,109050692,109050428,109038117,109036380,109033501,109020505	Gene ID= ENSG00000106771.12 TPM= 4.25 Transcript Type= NA
chr9	109015152	109119945	109015152	109119945	-	ENST00000374586.7@TMEM245	ENST00000374586.7	protein_coding	109119335,109108453,109106508,109093475,109090922,109087173,109085997,109080839,109073356,109064477,109060354,109057191,109050570,109050283,109038017,109036206,109033307,109015152	109119945,109108570,109106609,109093591,109091155,109087342,109086020,109080943,109073438,109064567,109060452,109057322,109050692,109050428,109038117,109036380,109033501,109020505	Gene ID= ENSG00000106771.12 TPM= 21.59 Transcript Type= protein_coding
chr9	109375700	109498306	109375700	109498306	-	ENST00000374541.3@PTPN3	ENST00000374541.3	protein_coding	109498219,109463297,109457292,109457173,109454496,109448811,109445240,109438114,109436883,109433073,109428621,109426950,109422718,109420424,109410229,109409999,109408321,109406462,109404448,109391471,109391138,109389233,109383423,109382302,109381652,109375700	109498306,109463451,109457399,109457215,109454574,109448855,109445292,109438234,109436970,109433161,109428684,109427122,109422852,109420600,109410415,109410076,109408377,109406618,109404608,109391561,109391199,109389379,109383551,109382447,109381787,109379633	Gene ID= ENSG00000070159.13 TPM= 5.31 Transcript Type= protein_coding
chr9	109378240	109421487	109378240	109421487	-	transcript2345.chr9.nnic@PTPN3	transcript2345.chr9.nnic	protein_coding	109421234,109420424,109410229,109409999,109408321,109406462,109404448,109391471,109391138,109389233,109383423,109382302,109381652,109378240	109421487,109420600,109410415,109410076,109408377,109406618,109404608,109391561,109391199,109389379,109383551,109382447,109381787,109379633	Gene ID= ENSG00000070159.13 TPM= 8.5 Transcript Type= NA
chr9	109378240	109420665	109378240	109420665	-	transcript2346.chr9.nic@PTPN3	transcript2346.chr9.nic	protein_coding	109420424,109410229,109409999,109408321,109406462,109404448,109391471,109391138,109389233,109383423,109382302,109381652,109378240	109420665,109410415,109410076,109408377,109406618,109404608,109391561,109391199,109389379,109383551,109382447,109381787,109379633	Gene ID= ENSG00000070159.13 TPM= 6.37 Transcript Type= NA
chr9	109779958	110170219	109779958	110170219	+	transcript2359.chr9.nic@PALM2-AKAP2	transcript2359.chr9.nic	protein_coding	109779958,109867491,109880551,109923735,109925061,109931927,110015954,110136127,110168399	109780533,109867571,109880681,109923849,109925082,109932028,110016039,110138539,110170219	Gene ID= ENSG00000157654.17 TPM= 20.18 Transcript Type= NA
chr9	109780309	110172512	109780309	110172512	+	ENST00000374530.7@PALM2-AKAP2	ENST00000374530.7	protein_coding	109780309,109867491,109880551,109923735,109925061,109931927,110015954,110136127,110156319,110162094,110168399	109780533,109867571,109880681,109923849,109925082,109932028,110016039,110138539,110156497,110162132,110172512	Gene ID= ENSG00000157654.17 TPM= 44.96 Transcript Type= protein_coding
chr9	109787582	109792260	109787582	109792260	+	transcript2399.chr9.nnic@NA	transcript2399.chr9.nnic	NA	109787582	109792260	Gene ID= novel_gene_chr9_2400 TPM= 2.12 Transcript Type= NA
chr9	109941147	109944502	109941147	109944502	-	transcript2407.chr9.nnic@NA	transcript2407.chr9.nnic	NA	109941147	109944502	Gene ID= novel_gene_chr9_2408 TPM= 39.3 Transcript Type= NA
chr9	110025401	110026630	110025401	110026630	-	transcript2401.chr9.nnic@NA	transcript2401.chr9.nnic	NA	110025401	110026630	Gene ID= novel_gene_chr9_2402 TPM= 2.12 Transcript Type= NA
chr9	110125470	110172486	110125470	110172486	+	transcript2397.chr9.nic@AKAP2	transcript2397.chr9.nic	protein_coding	110125470,110136127,110168399	110125596,110138539,110172486	Gene ID= ENSG00000241978.9 TPM= 25.84 Transcript Type= NA
chr9	110048696	110172512	110048696	110172512	+	ENST00000374525.5@AKAP2	ENST00000374525.5	protein_coding	110048696,110136127,110156319,110168399	110048855,110138539,110156497,110172512	Gene ID= ENSG00000241978.9 TPM= 86.39 Transcript Type= protein_coding
chr9	110057368	110061572	110057368	110061572	-	transcript2403.chr9.nnic@NA	transcript2403.chr9.nnic	NA	110057368	110061572	Gene ID= novel_gene_chr9_2404 TPM= 14.87 Transcript Type= NA
chr9	110243811	110256640	110243811	110256640	-	ENST00000374517.5@TXN	ENST00000374517.5	protein_coding	110256412,110251358,110250820,110244778,110243811	110256640,110251462,110250879,110244843,110244219	Gene ID= ENSG00000136810.12 TPM= 60.54 Transcript Type= protein_coding
chr9	110873263	111038462	110873263	111038462	-	transcript2413.chr9.nic@LPAR1	transcript2413.chr9.nic	protein_coding	111038167,110973481,110972073,110941421,110873263	111038462,110973558,110972220,110942168,110875722	Gene ID= ENSG00000198121.13 TPM= 6.37 Transcript Type= NA
chr9	110941668	111038458	110941668	111038458	-	ENST00000441240.1@LPAR1	ENST00000441240.1	protein_coding	111038167,110973481,110972073,110941668	111038458,110973558,110972220,110942168	Gene ID= ENSG00000198121.13 TPM= 1.06 Transcript Type= protein_coding
chr9	111361891	111483880	111361891	111483880	-	transcript2417.chr9.nnic@KIAA0368	transcript2417.chr9.nnic	protein_coding	111483504,111472897,111451425,111444378,111442306,111440372,111436940,111433233,111430547,111428042,111425743,111425418,111423199,111422134,111421921,111420017,111417883,111416272,111414429,111413895,111412014,111410980,111410041,111408571,111397030,111394160,111393680,111392768,111391756,111389984,111389556,111386377,111385337,111384522,111383211,111378580,111376476,111375113,111373972,111373315,111373170,111372429,111371621,111370722,111370435,111369035,111366522,111366239,111363588,111361891	111483880,111473000,111451555,111444494,111442424,111440521,111437108,111433372,111430628,111428161,111425828,111425496,111423248,111422200,111422043,111420120,111418006,111416352,111414651,111413986,111412148,111411142,111410213,111408672,111397153,111394305,111393734,111392882,111391824,111390101,111389723,111386456,111385442,111384569,111383332,111378730,111376541,111375202,111374038,111373406,111373236,111372620,111371829,111370765,111370627,111369173,111366627,111366327,111363659,111362169	Gene ID= ENSG00000136813.14 TPM= 5.23 Transcript Type= NA
chr9	111361891	111484381	111361891	111484381	-	transcript2418.chr9.nnic@KIAA0368	transcript2418.chr9.nnic	protein_coding	111484116,111472897,111451425,111444378,111442306,111440372,111436940,111433233,111430547,111428042,111425743,111425418,111423199,111422134,111421921,111420017,111417883,111416272,111414429,111413895,111412014,111410980,111410041,111408571,111397030,111394160,111393680,111392768,111391756,111389984,111389556,111386377,111385337,111384522,111383211,111378580,111376476,111375113,111373972,111373315,111373170,111372429,111371621,111370722,111370435,111369035,111366522,111366239,111363588,111361891	111484381,111473000,111451555,111444494,111442424,111440521,111437108,111433372,111430628,111428161,111425828,111425496,111423248,111422200,111422043,111420120,111418006,111416352,111414651,111413986,111412148,111411142,111410213,111408672,111397153,111394305,111393734,111392882,111391824,111390101,111389723,111386456,111385442,111384569,111383332,111378730,111376541,111375202,111374038,111373406,111373236,111372620,111371829,111370765,111370627,111369173,111366627,111366327,111363659,111362169	Gene ID= ENSG00000136813.14 TPM= 4.16 Transcript Type= NA
chr9	111361891	111483881	111361891	111483881	-	transcript2420.chr9.nic@KIAA0368	transcript2420.chr9.nic	protein_coding	111483504,111451425,111444378,111442306,111440372,111436940,111433233,111430547,111428042,111425743,111425418,111423199,111422134,111421921,111420017,111417883,111416272,111414429,111413895,111412014,111410980,111410041,111408571,111397030,111394160,111393680,111392768,111391756,111389984,111389556,111386377,111385337,111384522,111383211,111378580,111376476,111375113,111373972,111373315,111373170,111372429,111371621,111370722,111370435,111369035,111366522,111366239,111363588,111361891	111483881,111451555,111444494,111442424,111440521,111437108,111433372,111430628,111428161,111425828,111425496,111423248,111422200,111422043,111420120,111418006,111416352,111414651,111413986,111412148,111411142,111410213,111408672,111397153,111394305,111393734,111392882,111391824,111390101,111389723,111386456,111385442,111384569,111383332,111378730,111376541,111375202,111374038,111373406,111373236,111372620,111371829,111370765,111370627,111369173,111366627,111366327,111363659,111362169	Gene ID= ENSG00000136813.14 TPM= 25.41 Transcript Type= NA
chr9	111360693	111484745	111360693	111484745	-	ENST00000259335.8@KIAA0368	ENST00000259335.8	protein_coding	111484662,111484354,111483985,111451425,111444378,111442306,111440372,111436940,111433233,111430547,111428042,111425743,111425418,111423199,111422134,111421921,111420017,111417883,111416272,111414429,111413895,111412014,111410980,111410041,111408571,111397030,111394160,111393680,111392768,111391756,111389984,111389556,111386377,111385337,111384522,111383211,111378580,111376476,111375113,111373972,111373315,111373170,111372429,111371621,111370722,111370435,111369035,111366522,111366239,111363588,111360693	111484745,111484548,111484261,111451555,111444494,111442424,111440521,111437108,111433372,111430628,111428161,111425828,111425496,111423248,111422200,111422043,111420120,111418006,111416352,111414651,111413986,111412148,111411142,111410213,111408672,111397153,111394305,111393734,111392882,111391824,111390101,111389723,111386456,111385442,111384569,111383332,111378730,111376541,111375202,111374038,111373406,111373236,111372620,111371829,111370765,111370627,111369173,111366627,111366327,111363659,111362169	Gene ID= ENSG00000136813.14 TPM= 3.45 Transcript Type= protein_coding
chr9	111562967	111599855	111562967	111599855	-	ENST00000407693.6@PTGR1	ENST00000407693.6	protein_coding	111599603,111597317,111594222,111592926,111585998,111583472,111578796,111574734,111570091,111562967	111599855,111597432,111594267,111592982,111586165,111583589,111578951,111574842,111570209,111563231	Gene ID= ENSG00000106853.18 TPM= 5.84 Transcript Type= protein_coding
chr9	111562967	111599407	111562967	111599407	-	ENST00000309195.9@PTGR1	ENST00000309195.9	protein_coding	111599339,111597317,111594222,111592926,111585998,111583472,111578796,111574734,111570091,111562967	111599407,111597432,111594267,111592982,111586165,111583589,111578951,111574842,111570209,111563231	Gene ID= ENSG00000106853.18 TPM= 22.84 Transcript Type= protein_coding
chr9	111631352	111654351	111631352	111654351	+	ENST00000313525.3@DNAJC25	ENST00000313525.3	protein_coding	111631352,111647107,111649453,111653100	111631743,111647259,111649923,111654351	Gene ID= ENSG00000059769.19 TPM= 4.25 Transcript Type= protein_coding
chr9	111631360	111654351	111631360	111654351	+	ENST00000447096.1@DNAJC25	ENST00000447096.1	protein_coding	111631360,111642857,111647107,111649453,111653100	111631743,111643094,111647259,111649923,111654351	Gene ID= ENSG00000059769.19 TPM= 9.56 Transcript Type= nonsense_mediated_decay
chr9	111661335	111670246	111661335	111670246	+	ENST00000374293.4@GNG10	ENST00000374293.4	protein_coding	111661335,111666815,111669269	111661715,111666946,111670246	Gene ID= ENSG00000242616.3 TPM= 74.35 Transcript Type= protein_coding
chr9	111897122	111935369	111897122	111935369	+	transcript2452.chr9.nic@UGCG	transcript2452.chr9.nic	protein_coding	111897122,111914605,111915759,111922849,111924777,111926384,111929500,111931271,111932170,111932827	111897313,111914746,111915836,111922951,111924878,111926496,111929678,111931357,111932359,111935369	Gene ID= ENSG00000148154.9 TPM= 4.78 Transcript Type= NA
chr9	111896766	111935369	111896766	111935369	+	ENST00000374279.3@UGCG	ENST00000374279.3	protein_coding	111896766,111914605,111922849,111924777,111926384,111929500,111931271,111932170,111932827	111897313,111914746,111922951,111924878,111926496,111929678,111931357,111932359,111935369	Gene ID= ENSG00000148154.9 TPM= 41.96 Transcript Type= protein_coding
chr9	112379937	112472410	112379937	112472410	+	ENST00000398805.7@HSDL2	ENST00000398805.7	protein_coding	112379937,112403995,112405624,112408907,112416841,112418860,112438431,112441699,112454013,112459449,112470432	112380180,112404158,112405722,112409021,112416944,112418958,112438625,112441770,112454162,112459577,112472410	Gene ID= ENSG00000119471.14 TPM= 98.25 Transcript Type= protein_coding
chr9	112380080	112472405	112380080	112472405	+	ENST00000398803.1@HSDL2	ENST00000398803.1	protein_coding	112380080,112403995,112405624,112418860,112438431,112441699,112454013,112459449,112470432	112380180,112404158,112405722,112418958,112438625,112441770,112454162,112459577,112472405	Gene ID= ENSG00000119471.14 TPM= 8.5 Transcript Type= protein_coding
chr9	112471592	112475505	112471592	112475505	+	transcript2482.chr9.nnic@NA	transcript2482.chr9.nnic	NA	112471592	112475505	Gene ID= novel_gene_chr9_2483 TPM= 4.25 Transcript Type= NA
chr9	112683926	112718236	112683926	112718236	-	ENST00000374242.8@INIP	ENST00000374242.8	protein_coding	112717987,112716461,112694131,112689527,112683926	112718236,112716541,112694233,112689617,112687633	Gene ID= ENSG00000148153.13 TPM= 4.25 Transcript Type= protein_coding
chr9	112997120	113012227	112997120	113012227	-	ENST00000638622.1@ZNF883	ENST00000638622.1	protein_coding	113012150,113011141,113001994,112999665,112997120	113012227,113011227,113002073,112999814,112999138	Gene ID= ENSG00000228623.5 TPM= 2.12 Transcript Type= processed_transcript
chr9	113038380	113056716	113038380	113056716	-	ENST00000374227.7@ZFP37	ENST00000374227.7	protein_coding	113056557,113049791,113049362,113038380	113056716,113049872,113049496,113044268	Gene ID= ENSG00000136866.13 TPM= 1.06 Transcript Type= protein_coding
chr9	113042241	113056759	113042241	113056759	-	ENST00000555206.5@ZFP37	ENST00000555206.5	protein_coding	113056557,113049791,113049362,113042241	113056759,113049875,113049496,113044268	Gene ID= ENSG00000136866.13 TPM= 1.06 Transcript Type= protein_coding
chr9	113150942	113164137	113150942	113164137	+	ENST00000259392.7@SLC31A2	ENST00000259392.7	protein_coding	113150942,113157727,113161509,113162749	113151080,113157793,113161698,113164137	Gene ID= ENSG00000136867.10 TPM= 11.68 Transcript Type= protein_coding
chr9	113165520	113221361	113165520	113221361	-	ENST00000238256.7@FKBP15	ENST00000238256.7	protein_coding	113221191,113211477,113207212,113206509,113202961,113202531,113199814,113198855,113196932,113194027,113193492,113190471,113188389,113187793,113186249,113184695,113184292,113183751,113182766,113178630,113176537,113174428,113173453,113171581,113170522,113169224,113168460,113165520	113221361,113211592,113207296,113206578,113203035,113202629,113199963,113198923,113197078,113194169,113193549,113190578,113188491,113187899,113186363,113184804,113184399,113183845,113182868,113178801,113176673,113174583,113173605,113171706,113170629,113169942,113168556,113166155	Gene ID= ENSG00000119321.8 TPM= 14.34 Transcript Type= protein_coding
chr9	113221528	113259371	113221528	113259371	+	transcript2514.chr9.nic@SLC31A1	transcript2514.chr9.nic	protein_coding	113221528,113256114,113257113,113258694	113221678,113256277,113257185,113259371	Gene ID= ENSG00000136868.10 TPM= 3.19 Transcript Type= NA
chr9	113221587	113227660	113221587	113227660	+	ENST00000496650.1@SLC31A1	ENST00000496650.1	protein_coding	113221587,113227278	113221678,113227660	Gene ID= ENSG00000136868.10 TPM= 1.06 Transcript Type= processed_transcript
chr9	113221562	113264492	113221562	113264492	+	ENST00000374212.4@SLC31A1	ENST00000374212.4	protein_coding	113221562,113256114,113257113,113258694,113260272	113221678,113256277,113257185,113258862,113264492	Gene ID= ENSG00000136868.10 TPM= 3.19 Transcript Type= protein_coding
chr9	113267008	113275589	113267008	113275589	-	ENST00000374206.3@CDC26	ENST00000374206.3	protein_coding	113275382,113273329,113272427,113267008	113275589,113273438,113272548,113267439	Gene ID= ENSG00000176386.8 TPM= 63.2 Transcript Type= protein_coding
chr9	113267008	113275590	113267008	113275590	-	transcript2519.chr9.nnic@CDC26	transcript2519.chr9.nnic	protein_coding	113275463,113273329,113272427,113267008	113275590,113273438,113272548,113267439	Gene ID= ENSG00000176386.8 TPM= 12.21 Transcript Type= NA
chr9	113266134	113266486	113266134	113266486	-	transcript2524.chr9.nnic@NA	transcript2524.chr9.nnic	NA	113266134	113266486	Gene ID= novel_gene_chr9_2525 TPM= 2.12 Transcript Type= NA
chr9	113275343	113292905	113275343	113292905	+	ENST00000374199.8@PRPF4	ENST00000374199.8	protein_coding	113275343,113276548,113278945,113282646,113283132,113283389,113284295,113286232,113286705,113288175,113290466,113290700,113290898,113291467	113275770,113276725,113279131,113282733,113283211,113283482,113284389,113286290,113286828,113288264,113290588,113290807,113291016,113292905	Gene ID= ENSG00000136875.12 TPM= 12.75 Transcript Type= protein_coding
chr9	113275642	113292776	113275642	113292776	+	ENST00000374198.4@PRPF4	ENST00000374198.4	protein_coding	113275642,113276545,113278945,113282646,113283132,113283389,113284295,113286232,113286705,113288175,113290466,113290700,113290898,113291467	113275770,113276725,113279131,113282733,113283211,113283482,113284389,113286290,113286828,113288264,113290588,113290807,113291016,113292776	Gene ID= ENSG00000136875.12 TPM= 15.93 Transcript Type= protein_coding
chr9	113315671	113340302	113315671	113340302	-	transcript2530.chr9.nic@WDR31	transcript2530.chr9.nic	protein_coding	113340217,113331907,113330984,113328881,113323011,113322811,113321511,113320357,113318475,113315671	113340302,113332050,113331116,113328955,113323155,113322911,113321578,113320498,113318637,113316909	Gene ID= ENSG00000148225.15 TPM= 3.19 Transcript Type= NA
chr9	113315684	113340254	113315684	113340254	-	ENST00000465205.2@WDR31	ENST00000465205.2	protein_coding	113340217,113336288,113331907,113328881,113323011,113322811,113321511,113320357,113318475,113315684	113340254,113336440,113332050,113328955,113323155,113322911,113321578,113320498,113318637,113316909	Gene ID= ENSG00000148225.15 TPM= 1.06 Transcript Type= nonsense_mediated_decay
chr9	113373419	113376999	113373419	113376999	-	ENST00000374180.3@HDHD3	ENST00000374180.3	protein_coding	113376729,113375453,113373419	113376999,113375567,113374529	Gene ID= ENSG00000119431.9 TPM= 10.62 Transcript Type= protein_coding
chr9	113386317	113401347	113386317	113401347	-	transcript2546.chr9.nnic@ALAD	transcript2546.chr9.nnic	protein_coding	113401212,113393447,113392119,113391527,113390798,113390593,113390405,113389773,113389599,113389438,113388977,113386317	113401347,113393634,113392169,113391623,113390933,113390691,113390493,113389828,113389686,113389524,113389106,113388361	Gene ID= ENSG00000148218.15 TPM= 6.8 Transcript Type= NA
chr9	113386317	113401333	113386317	113401333	-	ENST00000409155.7@ALAD	ENST00000409155.7	protein_coding	113401212,113393447,113392119,113391527,113390798,113390593,113390405,113389773,113389599,113389438,113388977,113386317	113401333,113393634,113392169,113391623,113390933,113390676,113390493,113389828,113389686,113389524,113389106,113388361	Gene ID= ENSG00000148218.15 TPM= 133.73 Transcript Type= protein_coding
chr9	113386319	113401243	113386319	113401243	-	ENST00000482847.5@ALAD	ENST00000482847.5	protein_coding	113401212,113393447,113392119,113391527,113390798,113390593,113390405,113389773,113389599,113389438,113388977,113386319	113401243,113393634,113392335,113391623,113390933,113390676,113390493,113389828,113389686,113389524,113389106,113388361	Gene ID= ENSG00000148218.15 TPM= 9.45 Transcript Type= retained_intron
chr9	113410686	113429684	113410686	113429684	+	ENST00000374165.5@C9orf43	ENST00000374165.5	protein_coding	113410686,113413445,113413759,113419108,113421103,113422549,113423326,113424166,113425019,113425344,113425643,113428147,113428900,113429172	113411001,113413644,113413894,113419165,113421203,113422585,113423498,113424316,113425076,113425420,113425730,113428223,113428963,113429684	Gene ID= ENSG00000157653.11 TPM= 1.06 Transcript Type= protein_coding
chr9	113410742	113429684	113410742	113429684	+	ENST00000288462.4@C9orf43	ENST00000288462.4	protein_coding	113410742,113413445,113413759,113419108,113421103,113422549,113423326,113424166,113425019,113425344,113425643,113428147,113428900,113429172	113411138,113413644,113413894,113419165,113421203,113422585,113423498,113424316,113425076,113425420,113425730,113428223,113428963,113429684	Gene ID= ENSG00000157653.11 TPM= 1.06 Transcript Type= protein_coding
chr9	113501471	113542091	113501471	113542091	+	transcript2571.chr9.nic@RGS3	transcript2571.chr9.nic	protein_coding	113501471,113505442,113506388,113507287,113508541,113514458,113517541,113522930,113529221,113536796,113541320	113501630,113505523,113506493,113507638,113508580,113514654,113517624,113523041,113529264,113536918,113542091	Gene ID= ENSG00000138835.22 TPM= 9.56 Transcript Type= NA
chr9	113501503	113549767	113501503	113549767	+	transcript2574.chr9.nnic@RGS3	transcript2574.chr9.nnic	protein_coding	113501503,113505442,113506388,113507287,113508541,113514458,113517541,113522930,113529221,113536796,113548605	113501630,113505523,113506493,113507638,113508580,113514654,113517624,113523041,113529264,113536918,113549767	Gene ID= ENSG00000138835.22 TPM= 7.44 Transcript Type= NA
chr9	113565033	113597723	113565033	113597723	+	transcript2589.chr9.nnic@RGS3	transcript2589.chr9.nnic	protein_coding	113565033,113583450,113591333,113594430,113594919,113595599,113596768	113565730,113584427,113591397,113594531,113594980,113595765,113597723	Gene ID= ENSG00000138835.22 TPM= 41.77 Transcript Type= NA
chr9	113565051	113597723	113565051	113597723	+	transcript2590.chr9.nic@RGS3	transcript2590.chr9.nic	protein_coding	113565051,113583450,113591333,113594430,113594919,113595599,113596768	113565360,113584427,113591397,113594531,113594980,113595765,113597723	Gene ID= ENSG00000138835.22 TPM= 24.78 Transcript Type= NA
chr9	113463732	113542089	113463732	113542089	+	ENST00000317613.10@RGS3	ENST00000317613.10	protein_coding	113463732,113479491,113483059,113484138,113485625,113495786,113497314,113498025,113505442,113506388,113507287,113508541,113514458,113517541,113522930,113529221,113536796,113541320	113463881,113479541,113483117,113484232,113485693,113495846,113497404,113498080,113505523,113506493,113507638,113508580,113514654,113517624,113523041,113529264,113536918,113542089	Gene ID= ENSG00000138835.22 TPM= 5.31 Transcript Type= protein_coding
chr9	113594129	113597729	113594129	113597729	+	ENST00000620489.1@RGS3	ENST00000620489.1	protein_coding	113594129,113594430,113594919,113595599,113596768	113594338,113594531,113594980,113595765,113597729	Gene ID= ENSG00000138835.22 TPM= 101.26 Transcript Type= protein_coding
chr9	113595472	113597738	113595472	113597738	+	ENST00000490241.1@RGS3	ENST00000490241.1	protein_coding	113595472,113596768	113595765,113597738	Gene ID= ENSG00000138835.22 TPM= 18.06 Transcript Type= retained_intron
chr9	113544301	113547471	113544301	113547471	-	transcript2604.chr9.nnic@NA	transcript2604.chr9.nnic	NA	113544301	113547471	Gene ID= novel_gene_chr9_2605 TPM= 103.03 Transcript Type= NA
chr9	113591579	113592926	113591579	113592926	+	transcript2602.chr9.nnic@NA	transcript2602.chr9.nnic	NA	113591579	113592926	Gene ID= novel_gene_chr9_2603 TPM= 3.19 Transcript Type= NA
chr9	114091638	114099291	114091638	114099291	-	ENST00000640217.1@KIF12	ENST00000640217.1	protein_coding	114099251,114099104,114098935,114098302,114098115,114097607,114097301,114096387,114096051,114095214,114095023,114094353,114094181,114093886,114093407,114093229,114092542,114092333,114091638	114099291,114099169,114099013,114098429,114098190,114097741,114097436,114096478,114096207,114095332,114095127,114094455,114094271,114093972,114093497,114093333,114092642,114092451,114092000	Gene ID= ENSG00000136883.13 TPM= 2.12 Transcript Type= protein_coding
chr9	114155560	114312511	114155560	114312511	+	ENST00000356083.7@COL27A1	ENST00000356083.7	protein_coding	114155560,114162715,114167689,114178291,114183022,114194404,114195959,114205102,114205759,114206252,114209675,114210982,114219791,114222223,114231079,114231822,114235599,114236981,114237662,114240220,114240434,114242187,114243507,114245866,114250615,114252593,114252879,114258541,114264355,114264924,114265066,114265422,114266565,114267504,114269241,114270728,114275661,114282277,114282457,114283709,114284724,114288455,114288702,114288914,114289242,114290058,114290224,114290810,114292103,114300070,114300625,114301072,114301284,114301445,114301682,114302082,114304608,114306520,114307669,114309260,114310549	114156012,114162785,114169463,114178344,114183075,114194457,114196012,114205146,114205812,114206296,114209728,114211026,114219844,114222267,114231132,114231866,114235652,114237034,114237715,114240273,114240487,114242231,114243560,114245910,114250668,114252646,114252932,114258594,114264408,114264968,114265110,114265475,114266618,114267557,114269294,114270781,114275768,114282330,114282564,114283762,114284777,114288511,114288755,114288967,114289295,114290111,114290331,114290917,114292210,114300123,114300687,114301125,114301319,114301462,114301717,114302108,114304673,114306688,114307778,114309478,114312511	Gene ID= ENSG00000196739.14 TPM= 9.56 Transcript Type= protein_coding
chr9	114224650	114228580	114224650	114228580	-	transcript2616.chr9.nnic@NA	transcript2616.chr9.nnic	NA	114224650	114228580	Gene ID= novel_gene_chr9_2617 TPM= 14.87 Transcript Type= NA
chr9	114587746	114598373	114587746	114598373	+	ENST00000374050.3@ATP6V1G1	ENST00000374050.3	protein_coding	114587746,114592552,114597570	114587920,114592652,114598373	Gene ID= ENSG00000136888.6 TPM= 128.52 Transcript Type= protein_coding
chr9	114611206	114646422	114611206	114646422	+	ENST00000374049.4@TMEM268	ENST00000374049.4	protein_coding	114611206,114617118,114624350,114626896,114628101,114633768,114636990,114638544,114643134	114611564,114617301,114624459,114627006,114628250,114633878,114637070,114638726,114646422	Gene ID= ENSG00000157693.14 TPM= 4.25 Transcript Type= protein_coding
chr9	115020534	115118158	115020534	115118158	-	transcript2626.chr9.nic@TNC	transcript2626.chr9.nic	protein_coding	115117982,115090562,115085864,115084209,115082692,115081772,115077943,115076390,115076032,115073603,115042219,115040941,115038261,115036098,115035204,115031553,115030254,115029360,115026534,115023973,115020534	115118158,115091154,115087273,115084472,115082807,115081928,115078212,115076575,115076121,115073866,115042341,115041084,115038380,115036241,115035334,115031685,115030405,115029456,115026695,115024136,115021267	Gene ID= ENSG00000041982.15 TPM= 13.81 Transcript Type= NA
chr9	116153804	116402322	116153804	116402322	+	ENST00000328252.3@PAPPA	ENST00000328252.3	protein_coding	116153804,116187154,116207456,116211639,116219937,116227431,116235139,116265857,116271325,116302757,116331244,116332333,116334861,116344543,116347026,116352706,116353622,116362592,116367645,116377576,116382395,116396509	116154587,116188216,116207601,116211932,116220129,116227552,116235637,116265985,116271416,116302950,116331357,116332468,116335074,116344711,116347209,116352916,116353793,116362739,116367754,116377647,116382493,116402322	Gene ID= ENSG00000182752.9 TPM= 1.06 Transcript Type= protein_coding
chr9	116425228	116687235	116425228	116687235	-	transcript2630.chr9.nic@ASTN2	transcript2630.chr9.nic	protein_coding	116687066,116651528,116620310,116618324,116487359,116442453,116440609,116425228	116687235,116651793,116620443,116618472,116487500,116442553,116440792,116426088	Gene ID= ENSG00000148219.16 TPM= 3.19 Transcript Type= NA
chr9	116687302	116701298	116687302	116701298	+	ENST00000450136.1@TRIM32	ENST00000450136.1	protein_coding	116687302,116697662	116687381,116701298	Gene ID= ENSG00000119401.10 TPM= 5.31 Transcript Type= protein_coding
chr9	116694461	116696239	116694461	116696239	-	transcript2632.chr9.nnic@NA	transcript2632.chr9.nnic	NA	116694461	116696239	Gene ID= novel_gene_chr9_2633 TPM= 4.25 Transcript Type= NA
chr9	117704372	117716871	117704372	117716871	+	ENST00000355622.6@TLR4	ENST00000355622.6	protein_coding	117704372,117708563,117712389	117704565,117708729,117716871	Gene ID= ENSG00000136869.13 TPM= 2.12 Transcript Type= protein_coding
chr9	120389199	120580172	120389199	120580172	-	transcript2639.chr9.nic@CDK5RAP2	transcript2639.chr9.nic	protein_coding	120579920,120571974,120568321,120550792,120545714,120539041,120536372,120529978,120528744,120527806,120524986,120518427,120491307,120487294,120477350,120471748,120470111,120467860,120458450,120453456,120447895,120443620,120439399,120437295,120422693,120419788,120415040,120411358,120409127,120408347,120407012,120404036,120402806,120400742,120394512,120389741,120389199	120580172,120572041,120568388,120550902,120545790,120539164,120536526,120530140,120528797,120527925,120525078,120518645,120491477,120487437,120477450,120471878,120470220,120467997,120458622,120453873,120448126,120443742,120439972,120437527,120422741,120419960,120415159,120411474,120409316,120408468,120407248,120404113,120403071,120400885,120394638,120389787,120389292	Gene ID= ENSG00000136861.17 TPM= 5.31 Transcript Type= NA
chr9	120389199	120534047	120389199	120534047	-	transcript2640.chr9.nnic@CDK5RAP2	transcript2640.chr9.nnic	protein_coding	120533917,120529978,120528744,120527806,120524986,120518427,120491307,120487294,120477350,120471748,120470111,120467860,120458450,120453456,120447895,120443620,120439399,120437295,120422693,120419788,120415040,120411358,120409127,120408347,120407012,120404036,120402806,120400742,120394512,120389741,120389199	120534047,120530140,120528797,120527925,120525078,120518645,120491477,120487437,120477450,120471878,120470220,120467997,120458622,120453873,120448126,120443742,120439972,120437527,120422741,120419960,120415159,120411474,120409316,120408468,120407248,120404113,120403071,120400885,120394638,120389787,120389292	Gene ID= ENSG00000136861.17 TPM= 5.31 Transcript Type= NA
chr9	120388876	120412417	120388876	120412417	-	transcript2643.chr9.nnic@CDK5RAP2	transcript2643.chr9.nnic	protein_coding	120411680,120411358,120409127,120408347,120407012,120404036,120402806,120400742,120394512,120389741,120388876	120412417,120411474,120409316,120408468,120407248,120404113,120403071,120400885,120394638,120389787,120389292	Gene ID= ENSG00000136861.17 TPM= 4.78 Transcript Type= NA
chr9	120388876	120412417	120388876	120412417	-	transcript2646.chr9.nnic@CDK5RAP2	transcript2646.chr9.nnic	protein_coding	120411680,120411358,120409127,120408347,120404036,120402806,120400742,120394512,120389741,120388876	120412417,120411474,120409316,120408468,120404113,120403071,120400885,120394638,120389787,120389292	Gene ID= ENSG00000136861.17 TPM= 2.66 Transcript Type= NA
chr9	120388876	120580158	120388876	120580158	-	ENST00000360190.8@CDK5RAP2	ENST00000360190.8	protein_coding	120579920,120571974,120568321,120550792,120545714,120539041,120536372,120529978,120528744,120527806,120524986,120518427,120491307,120487294,120477350,120471748,120470111,120467860,120460572,120458450,120453456,120447895,120443620,120439399,120437295,120422693,120419788,120415040,120411358,120409127,120408347,120404036,120402806,120400742,120394512,120389741,120388876	120580158,120572041,120568388,120550902,120545790,120539164,120536526,120530140,120528797,120527925,120525078,120518645,120491477,120487437,120477450,120471878,120470220,120467997,120460667,120458622,120453873,120448126,120443742,120439972,120437527,120422741,120419960,120415159,120411474,120409316,120408468,120404113,120403071,120400885,120394638,120389787,120389292	Gene ID= ENSG00000136861.17 TPM= 3.19 Transcript Type= protein_coding
chr9	120405797	120407725	120405797	120407725	+	transcript2649.chr9.nnic@NA	transcript2649.chr9.nnic	NA	120405797	120407725	Gene ID= novel_gene_chr9_2650 TPM= 6.37 Transcript Type= NA
chr9	120600917	120603009	120600917	120603009	-	transcript2651.chr9.nnic@NA	transcript2651.chr9.nnic	NA	120600917	120603009	Gene ID= novel_gene_chr9_2652 TPM= 5.31 Transcript Type= NA
chr9	120746823	120748454	120746823	120748454	+	transcript2654.chr9.nnic@NA	transcript2654.chr9.nnic	NA	120746823	120748454	Gene ID= novel_gene_chr9_2655 TPM= 2.12 Transcript Type= NA
chr9	120759194	120762871	120759194	120762871	-	transcript2656.chr9.nnic@NA	transcript2656.chr9.nnic	NA	120759194	120762871	Gene ID= novel_gene_chr9_2657 TPM= 7.44 Transcript Type= NA
chr9	120764172	120793427	120764172	120793427	-	transcript2661.chr9.nnic@FBXW2	transcript2661.chr9.nnic	protein_coding	120793354,120792887,120787769,120778351,120776093,120772754,120771348,120764172	120793427,120793257,120788186,120778545,120776226,120772840,120771517,120764847	Gene ID= ENSG00000119402.16 TPM= 3.54 Transcript Type= NA
chr9	120764172	120793433	120764172	120793433	-	transcript2666.chr9.nnic@FBXW2	transcript2666.chr9.nnic	protein_coding	120793360,120793149,120787769,120778351,120776093,120772754,120771348,120764172	120793433,120793257,120788278,120778545,120776226,120772840,120771517,120764847	Gene ID= ENSG00000119402.16 TPM= 5.66 Transcript Type= NA
chr9	120764172	120793331	120764172	120793331	-	transcript2672.chr9.nic@FBXW2	transcript2672.chr9.nic	protein_coding	120793149,120787769,120778351,120776093,120772754,120771348,120764172	120793331,120788278,120778545,120776226,120772840,120771517,120764847	Gene ID= ENSG00000119402.16 TPM= 3.54 Transcript Type= NA
chr9	120816053	120842984	120816053	120842984	-	ENST00000210313.7@PSMD5	ENST00000210313.7	protein_coding	120842737,120833312,120831832,120831331,120829099,120826765,120824494,120821355,120820839,120816053	120842984,120833456,120831945,120831459,120829208,120826907,120824685,120821464,120820979,120818163	Gene ID= ENSG00000095261.13 TPM= 3.19 Transcript Type= protein_coding
chr9	120855652	120868911	120855652	120868911	-	ENST00000419155.5@PHF19	ENST00000419155.5	protein_coding	120868808,120866870,120866028,120865710,120864049,120862588,120861918,120861089,120860090,120855652	120868911,120866965,120866096,120865830,120864116,120862749,120862005,120861174,120860185,120858286	Gene ID= ENSG00000119403.13 TPM= 13.46 Transcript Type= protein_coding
chr9	120855699	120868890	120855699	120868890	-	transcript2689.chr9.nnic@PHF19	transcript2689.chr9.nnic	protein_coding	120868808,120866870,120866028,120865710,120864049,120862613,120861089,120860090,120855699	120868890,120866965,120866096,120865830,120864116,120862749,120861174,120860185,120858286	Gene ID= ENSG00000119403.13 TPM= 4.96 Transcript Type= NA
chr9	120855699	120877328	120855699	120877328	-	ENST00000373896.7@PHF19	ENST00000373896.7	protein_coding	120877091,120874556,120873979,120870443,120869845,120869182,120866870,120866028,120865710,120864049,120862588,120861918,120861089,120860090,120855699	120877328,120874756,120874060,120870538,120869945,120869330,120866965,120866096,120865830,120864116,120862749,120862005,120861174,120860185,120858286	Gene ID= ENSG00000119403.13 TPM= 4.96 Transcript Type= protein_coding
chr9	120902393	120929173	120902393	120929173	-	ENST00000540010.1@TRAF1	ENST00000540010.1	protein_coding	120929114,120926550,120925936,120923705,120914235,120913328,120911336,120909230,120902393	120929173,120926688,120926301,120923792,120914300,120913738,120911513,120909378,120905238	Gene ID= ENSG00000056558.10 TPM= 1.06 Transcript Type= protein_coding
chr9	121181276	121201886	121181276	121201886	-	transcript2787.chr9.nic@RAB14	transcript2787.chr9.nic	protein_coding	121201639,121193361,121192171,121186953,121183311,121182930,121181276	121201886,121193419,121192224,121190731,121183398,121182960,121181573	Gene ID= ENSG00000119396.10 TPM= 2.12 Transcript Type= NA
chr9	121178137	121201869	121178137	121201869	-	ENST00000373840.8@RAB14	ENST00000373840.8	protein_coding	121201639,121193361,121192171,121190554,121186953,121183311,121182930,121178137	121201869,121193419,121192224,121190731,121187019,121183398,121182960,121181573	Gene ID= ENSG00000119396.10 TPM= 8.5 Transcript Type= protein_coding
chr9	121268150	121332842	121268150	121332842	+	transcript2707.chr9.nnic@GSN	transcript2707.chr9.nnic	protein_coding	121268150,121281470,121286083,121301963,121302911,121310684,121312339,121313934,121317086,121318406,121318665,121321268,121324554,121326512,121327308,121328891,121329238,121331388,121332434	121268219,121281562,121286185,121302167,121303065,121310845,121312488,121314023,121317218,121318494,121318880,121321401,121324644,121326682,121327482,121329015,121329315,121331448,121332842	Gene ID= ENSG00000148180.19 TPM= 176.99 Transcript Type= NA
chr9	121267781	121332842	121267781	121332842	+	transcript2715.chr9.nic@GSN	transcript2715.chr9.nic	protein_coding	121267781,121281470,121301963,121302911,121310684,121312339,121313934,121317086,121318406,121318665,121321268,121324554,121326512,121327308,121328891,121329238,121331388,121332434	121268219,121281562,121302167,121303065,121310845,121312488,121314023,121317218,121318494,121318880,121321401,121324644,121326682,121327482,121329015,121329315,121331448,121332842	Gene ID= ENSG00000148180.19 TPM= 444.29 Transcript Type= NA
chr9	121286086	121332842	121286086	121332842	+	transcript2724.chr9.nnic@GSN	transcript2724.chr9.nnic	protein_coding	121286086,121286602,121301963,121302911,121310684,121312339,121313934,121317086,121318406,121318665,121321268,121324554,121326512,121327308,121328891,121329238,121331388,121332434	121286185,121286761,121302167,121303065,121310845,121312488,121314023,121317218,121318494,121318880,121321401,121324644,121326682,121327482,121329015,121329315,121331448,121332842	Gene ID= ENSG00000148180.19 TPM= 146.19 Transcript Type= NA
chr9	121299793	121332842	121299793	121332842	+	ENST00000373818.8@GSN	ENST00000373818.8	protein_coding	121299793,121301963,121302911,121310684,121312339,121313934,121317086,121318406,121318665,121321268,121324554,121326512,121327308,121328891,121329238,121331388,121332434	121300005,121302167,121303065,121310845,121312488,121314023,121317218,121318494,121318880,121321401,121324644,121326682,121327482,121329015,121329315,121331448,121332842	Gene ID= ENSG00000148180.19 TPM= 1598.33 Transcript Type= protein_coding
chr9	121268168	121332843	121268168	121332843	+	ENST00000449733.7@GSN	ENST00000449733.7	protein_coding	121268168,121281470,121282439,121301963,121302911,121310684,121312339,121313934,121317086,121318406,121318665,121321268,121324554,121326512,121327308,121328891,121329238,121331388,121332434	121268219,121281562,121282550,121302167,121303065,121310845,121312488,121314023,121317218,121318494,121318880,121321401,121324644,121326682,121327482,121329015,121329315,121331448,121332843	Gene ID= ENSG00000148180.19 TPM= 136.01 Transcript Type= protein_coding
chr9	121339077	121370205	121339077	121370205	-	ENST00000286713.6@STOM	ENST00000286713.6	protein_coding	121370127,121356053,121354601,121353220,121349120,121348015,121339077	121370205,121356156,121354673,121353302,121349323,121348149,121341408	Gene ID= ENSG00000148175.12 TPM= 277.22 Transcript Type= protein_coding
chr9	121774344	121785530	121774344	121785530	+	transcript2817.chr9.nic@DAB2IP	transcript2817.chr9.nic	protein_coding	121774344,121781464,121782331	121776391,121781551,121785530	Gene ID= ENSG00000136848.16 TPM= 29.74 Transcript Type= NA
chr9	121651594	121785530	121651594	121785530	+	ENST00000408936.7@DAB2IP	ENST00000408936.7	protein_coding	121651594,121678678,121699325,121757013,121758898,121759885,121763505,121763735,121766494,121768432,121770546,121772607,121774260,121776198,121781464,121782331	121651899,121678781,121699458,121757166,121758996,121760439,121763649,121763879,121766730,121768633,121770724,121773495,121774412,121776391,121781551,121785530	Gene ID= ENSG00000136848.16 TPM= 63.73 Transcript Type= protein_coding
chr9	121609701	121612166	121609701	121612166	+	transcript2819.chr9.nnic@NA	transcript2819.chr9.nnic	NA	121609701	121612166	Gene ID= novel_gene_chr9_2820 TPM= 2.12 Transcript Type= NA
chr9	121656014	121657941	121656014	121657941	-	transcript2825.chr9.nnic@NA	transcript2825.chr9.nnic	NA	121656014	121657941	Gene ID= novel_gene_chr9_2826 TPM= 2.12 Transcript Type= NA
chr9	121745958	121747869	121745958	121747869	+	transcript2821.chr9.nnic@NA	transcript2821.chr9.nnic	NA	121745958	121747869	Gene ID= novel_gene_chr9_2822 TPM= 2.12 Transcript Type= NA
chr9	121747345	121751217	121747345	121751217	-	transcript2827.chr9.nnic@NA	transcript2827.chr9.nnic	NA	121747345	121751217	Gene ID= novel_gene_chr9_2828 TPM= 5.31 Transcript Type= NA
chr9	121988910	122093606	121988910	122093606	-	ENST00000373776.4@TTLL11	ENST00000373776.4	protein_coding	122092687,122039272,122031723,121988910	122093606,122039368,122031856,121989770	Gene ID= ENSG00000175764.14 TPM= 2.12 Transcript Type= protein_coding
chr9	122090647	122093288	122090647	122093288	-	transcript2831.chr9.nnic@NA	transcript2831.chr9.nnic	NA	122090647	122093288	Gene ID= novel_gene_chr9_2832 TPM= 2.12 Transcript Type= NA
chr9	122144058	122159819	122144058	122159819	-	ENST00000373768.3@NDUFA8	ENST00000373768.3	protein_coding	122159627,122152245,122148112,122144058	122159819,122152408,122148277,122144378	Gene ID= ENSG00000119421.6 TPM= 420.62 Transcript Type= protein_coding
chr9	122237624	122264839	122237624	122264839	-	ENST00000417201.3@RBM18	ENST00000417201.3	protein_coding	122264715,122261380,122251847,122247518,122245256,122237624	122264839,122261508,122251973,122247604,122245341,122242043	Gene ID= ENSG00000119446.13 TPM= 1.06 Transcript Type= protein_coding
chr9	122247676	122250078	122247676	122250078	+	transcript2860.chr9.nnic@NA	transcript2860.chr9.nnic	NA	122247676	122250078	Gene ID= novel_gene_chr9_2861 TPM= 3.19 Transcript Type= NA
chr9	122264615	122323461	122264615	122323461	+	transcript2842.chr9.nic@MRRF	transcript2842.chr9.nic	protein_coding	122264615,122270864,122280443,122285169,122286039,122291749,122313227,122322540	122264938,122271075,122280598,122285946,122286166,122291840,122313386,122323461	Gene ID= ENSG00000148187.17 TPM= 2.66 Transcript Type= NA
chr9	122264883	122323461	122264883	122323461	+	transcript2843.chr9.nic@MRRF	transcript2843.chr9.nic	protein_coding	122264883,122265462,122270864,122280443,122285169,122291749,122313227,122322540	122264938,122265545,122271075,122280598,122285287,122291840,122313386,122323461	Gene ID= ENSG00000148187.17 TPM= 6.9 Transcript Type= NA
chr9	122370986	122393299	122370986	122393299	+	transcript2863.chr9.nnic@PTGS1	transcript2863.chr9.nnic	protein_coding	122370986,122371186,122371613,122378433,122378775,122381371,122381664,122383509,122386446,122390198,122392189	122371091,122371272,122371834,122378573,122378918,122381552,122381747,122383755,122386732,122390345,122393299	Gene ID= ENSG00000095303.14 TPM= 2.12 Transcript Type= NA
chr9	122818344	122828631	122818344	122828631	-	ENST00000259467.8@PDCL	ENST00000259467.8	protein_coding	122828471,122826616,122823016,122818344	122828631,122826792,122823197,122820636	Gene ID= ENSG00000136940.13 TPM= 33.99 Transcript Type= protein_coding
chr9	122849453	122905283	122849453	122905283	-	ENST00000357244.6@RC3H2	ENST00000357244.6	protein_coding	122905110,122897279,122892909,122890312,122883204,122880594,122879993,122879755,122877471,122865349,122859917,122858669,122857923,122855732,122855184,122854531,122854185,122853952,122851323,122851081,122849453	122905283,122897576,122893026,122890545,122883379,122880794,122880125,122879873,122877583,122865657,122860131,122859102,122858093,122855878,122855397,122854615,122854266,122854086,122851436,122851229,122849822	Gene ID= ENSG00000056586.15 TPM= 14.87 Transcript Type= protein_coding
chr9	122853745	122905341	122853745	122905341	-	ENST00000423239.6@RC3H2	ENST00000423239.6	protein_coding	122905110,122897279,122892909,122890312,122883204,122880594,122879993,122879755,122877471,122865349,122859917,122858669,122857923,122855732,122855184,122854531,122854185,122853745	122905341,122897576,122893026,122890545,122883379,122880794,122880125,122879873,122877583,122865657,122860131,122859102,122858093,122855878,122855397,122854615,122854266,122854086	Gene ID= ENSG00000056586.15 TPM= 6.37 Transcript Type= protein_coding
chr9	122908056	122913330	122908056	122913330	-	ENST00000373659.3@ZBTB6	ENST00000373659.3	protein_coding	122913251,122908056	122913330,122912081	Gene ID= ENSG00000186130.4 TPM= 3.19 Transcript Type= protein_coding
chr9	122913514	122914990	122913514	122914990	-	transcript2881.chr9.nnic@NA	transcript2881.chr9.nnic	NA	122913514	122914990	Gene ID= novel_gene_chr9_2882 TPM= 2.12 Transcript Type= NA
chr9	122915566	122931500	122915566	122931500	-	ENST00000373656.3@ZBTB26	ENST00000373656.3	protein_coding	122931437,122915566	122931500,122919944	Gene ID= ENSG00000171448.8 TPM= 4.25 Transcript Type= protein_coding
chr9	122941001	123104431	122941001	123104431	+	transcript2885.chr9.nnic@RABGAP1	transcript2885.chr9.nnic	protein_coding	122941001,122957011,122984485,122986215,122989297,122990056,122996041,122996539,122997259,122998597,123010354,123015543,123020309,123065348,123070350,123073552,123074285,123076245,123076634,123089758,123090275,123097741,123098715,123099478,123101566,123103091,123103639	122941093,122957209,122984719,122986419,122989471,122990213,122996151,122996605,122997361,122998766,123010528,123015636,123020459,123065461,123070424,123073677,123074428,123076286,123076762,123089850,123090385,123097845,123098798,123099549,123101763,123103606,123104431	Gene ID= ENSG00000011454.16 TPM= 7.97 Transcript Type= NA
chr9	122941009	123104866	122941009	123104866	+	ENST00000373647.8@RABGAP1	ENST00000373647.8	protein_coding	122941009,122957011,122984485,122986215,122989297,122990056,122996041,122996539,122997259,122998597,123010354,123015543,123020309,123065348,123070350,123073552,123074285,123076245,123076634,123089758,123090275,123097741,123098715,123099478,123101566,123103091	122941093,122957209,122984719,122986419,122989471,122990213,122996151,122996605,122997361,122998766,123010528,123015636,123020459,123065461,123070424,123073677,123074428,123076286,123076762,123089850,123090385,123097845,123098798,123099549,123101763,123104866	Gene ID= ENSG00000011454.16 TPM= 19.65 Transcript Type= protein_coding
chr9	123124709	123268621	123124709	123268621	-	transcript2909.chr9.nic@STRBP	transcript2909.chr9.nic	protein_coding	123268436,123184132,123179007,123173677,123169902,123160977,123160367,123159096,123158332,123158012,123147778,123146855,123139529,123136381,123136041,123132845,123128214,123124709	123268621,123184298,123179227,123173842,123170046,123161068,123160462,123159207,123158429,123158123,123147870,123147054,123139687,123136515,123136181,123132968,123128258,123125673	Gene ID= ENSG00000165209.18 TPM= 2.84 Transcript Type= NA
chr9	123125220	123268564	123125220	123268564	-	ENST00000407982.6@STRBP	ENST00000407982.6	protein_coding	123268436,123184132,123179007,123173677,123169902,123168189,123160977,123160367,123159096,123158332,123158012,123147778,123146855,123139529,123136381,123136041,123132845,123128214,123125220	123268564,123184298,123179227,123173834,123170046,123168258,123161068,123160462,123159207,123158429,123158123,123147870,123147054,123139687,123136515,123136181,123132968,123128258,123125673	Gene ID= ENSG00000165209.18 TPM= 2.12 Transcript Type= nonsense_mediated_decay
chr9	124258251	124352438	124258251	124352438	+	ENST00000545174.5@NEK6	ENST00000545174.5	protein_coding	124258251,124301936,124312509,124313923,124321459,124326330,124327338,124339571,124347709,124350837	124258361,124302054,124312649,124313985,124321569,124326438,124327445,124339665,124347822,124352438	Gene ID= ENSG00000119408.16 TPM= 3.19 Transcript Type= protein_coding
chr9	124353466	124415439	124353466	124415439	-	ENST00000259457.7@PSMB7	ENST00000259457.7	protein_coding	124415364,124414842,124413908,124412352,124405317,124384598,124356764,124353466	124415439,124414935,124414005,124412492,124405432,124384656,124356915,124353709	Gene ID= ENSG00000136930.12 TPM= 228.36 Transcript Type= protein_coding
chr9	124356413	124359184	124356413	124359184	+	transcript2935.chr9.nnic@NA	transcript2935.chr9.nnic	NA	124356413	124359184	Gene ID= novel_gene_chr9_2936 TPM= 3.19 Transcript Type= NA
chr9	124857884	124861961	124857884	124861961	-	ENST00000348462.5@RPL35	ENST00000348462.5	protein_coding	124861910,124861419,124860183,124857884	124861961,124861555,124860264,124858067	Gene ID= ENSG00000136942.14 TPM= 517.8 Transcript Type= protein_coding
chr9	124857883	124861936	124857883	124861936	-	ENST00000487431.1@RPL35	ENST00000487431.1	protein_coding	124861419,124860183,124857883	124861936,124860264,124858067	Gene ID= ENSG00000136942.14 TPM= 12.21 Transcript Type= retained_intron
chr9	124862130	124877733	124862130	124877733	+	ENST00000353214.6@ARPC5L	ENST00000353214.6	protein_coding	124862130,124863988,124868428,124873692,124874975,124876878	124862398,124864107,124869439,124873764,124875151,124877733	Gene ID= ENSG00000136950.13 TPM= 57.36 Transcript Type= protein_coding
chr9	124869205	124877717	124869205	124877717	+	ENST00000259477.6@ARPC5L	ENST00000259477.6	protein_coding	124869205,124873692,124874975,124876878	124869439,124873764,124875151,124877717	Gene ID= ENSG00000136950.13 TPM= 1.06 Transcript Type= protein_coding
chr9	124878357	124941000	124878357	124941000	-	transcript2940.chr9.nnic@GOLGA1	transcript2940.chr9.nnic	protein_coding	124940913,124940106,124938577,124931316,124929216,124928188,124926709,124923095,124921723,124921129,124911901,124908377,124900452,124899329,124898549,124890389,124889434,124889143,124888253,124882510,124881784,124881171,124878357	124941000,124940155,124938866,124931406,124929290,124928285,124926741,124923223,124921892,124921240,124912026,124908472,124900547,124899478,124898644,124890478,124889536,124889303,124888396,124882569,124881954,124881257,124880610	Gene ID= ENSG00000136935.13 TPM= 7.97 Transcript Type= NA
chr9	124878357	124941099	124878357	124941099	-	ENST00000373555.8@GOLGA1	ENST00000373555.8	protein_coding	124940971,124940106,124938577,124931316,124929216,124928188,124926709,124923095,124921723,124921129,124911901,124908377,124900452,124899329,124898549,124890389,124889434,124889143,124888253,124882510,124881784,124881171,124878357	124941099,124940155,124938866,124931406,124929290,124928285,124926741,124923223,124921892,124921240,124912026,124908472,124900547,124899478,124898644,124890478,124889536,124889303,124888396,124882569,124881954,124881257,124880610	Gene ID= ENSG00000136935.13 TPM= 10.09 Transcript Type= protein_coding
chr9	124879207	124941001	124879207	124941001	-	transcript2942.chr9.nnic@GOLGA1	transcript2942.chr9.nnic	protein_coding	124940840,124940106,124938577,124931316,124929216,124928188,124926709,124923095,124921723,124921129,124911901,124908377,124900452,124899329,124898549,124890389,124889434,124889143,124888253,124882510,124881784,124881171,124879207	124941001,124940155,124938866,124931406,124929290,124928285,124926741,124923223,124921892,124921240,124912026,124908472,124900547,124899478,124898644,124890478,124889536,124889303,124888396,124882569,124881954,124881257,124880610	Gene ID= ENSG00000136935.13 TPM= 3.19 Transcript Type= NA
chr9	124906845	124941082	124906845	124941082	-	transcript2945.chr9.nic@GOLGA1	transcript2945.chr9.nic	protein_coding	124940971,124940106,124938577,124931316,124929216,124928188,124926709,124923095,124921723,124921129,124911901,124906845	124941082,124940155,124938866,124931406,124929290,124928285,124926741,124923223,124921892,124921240,124912026,124908472	Gene ID= ENSG00000136935.13 TPM= 2.12 Transcript Type= NA
chr9	125146574	125189939	125146574	125189939	-	ENST00000451402.5@PPP6C	ENST00000451402.5	protein_coding	125189562,125188919,125171085,125160841,125158241,125153906,125153533,125146574	125189939,125188947,125171180,125160906,125158382,125153985,125153742,125149921	Gene ID= ENSG00000119414.11 TPM= 1.06 Transcript Type= protein_coding
chr9	125146574	125189939	125146574	125189939	-	ENST00000415905.5@PPP6C	ENST00000415905.5	protein_coding	125189644,125171085,125158241,125153906,125153533,125146574	125189939,125171180,125158382,125153985,125153742,125149921	Gene ID= ENSG00000119414.11 TPM= 1.06 Transcript Type= protein_coding
chr9	125146573	125189818	125146573	125189818	-	ENST00000373547.8@PPP6C	ENST00000373547.8	protein_coding	125189644,125171085,125160841,125158241,125153906,125153533,125146573	125189818,125171180,125160906,125158382,125153985,125153742,125149921	Gene ID= ENSG00000119414.11 TPM= 4.25 Transcript Type= protein_coding
chr9	125200525	125233997	125200525	125233997	+	transcript2971.chr9.nnic@RABEPK	transcript2971.chr9.nnic	protein_coding	125200525,125200780,125203008,125207564,125227910,125232596,125233688	125200577,125200906,125203066,125207721,125228059,125232745,125233997	Gene ID= ENSG00000136933.16 TPM= 4.25 Transcript Type= NA
chr9	125234853	125241330	125234853	125241330	-	ENST00000324460.6@HSPA5	ENST00000324460.6	protein_coding	125241005,125240676,125240172,125239421,125238941,125238590,125238141,125234853	125241330,125240907,125240309,125239533,125239331,125238827,125238308,125237154	Gene ID= ENSG00000044574.7 TPM= 53.11 Transcript Type= protein_coding
chr9	125261794	125341264	125261794	125341264	+	transcript2979.chr9.nic@GAPVD1	transcript2979.chr9.nic	protein_coding	125261794,125268936,125298890,125301983,125305063,125307413,125307691,125312452,125321433,125323798,125326416,125330078,125331926,125332510,125337018,125337221,125341177	125261959,125268984,125299106,125302826,125305149,125307547,125307880,125312612,125321562,125323923,125326589,125330218,125332060,125332629,125337095,125337591,125341264	Gene ID= ENSG00000165219.21 TPM= 7.97 Transcript Type= NA
chr9	125261794	125341264	125261794	125341264	+	transcript2981.chr9.nic@GAPVD1	transcript2981.chr9.nic	protein_coding	125261794,125298890,125301983,125305063,125307413,125307691,125312452,125321433,125323798,125326416,125330078,125331926,125332510,125337018,125337221,125341177	125261959,125299106,125302826,125305149,125307547,125307880,125312612,125321562,125323923,125326589,125330218,125332060,125332629,125337095,125337591,125341264	Gene ID= ENSG00000165219.21 TPM= 13.28 Transcript Type= NA
chr9	125437394	125707234	125437394	125707234	-	ENST00000394063.5@MAPKAP1	ENST00000394063.5	protein_coding	125706971,125657651,125585555,125559633,125543059,125506310,125484443,125467972,125444501,125437394	125707234,125657799,125585727,125559809,125543168,125506417,125484583,125468109,125444598,125439012	Gene ID= ENSG00000119487.16 TPM= 8.41 Transcript Type= protein_coding
chr9	125437394	125707234	125437394	125707234	-	ENST00000265960.7@MAPKAP1	ENST00000265960.7	protein_coding	125706971,125672316,125669818,125657651,125585555,125559633,125543059,125506310,125484443,125467972,125444501,125437394	125707234,125672643,125669907,125657799,125585727,125559809,125543168,125506417,125484583,125468109,125444598,125439012	Gene ID= ENSG00000119487.16 TPM= 40.28 Transcript Type= protein_coding
chr9	125437394	125707212	125437394	125707212	-	ENST00000373503.7@MAPKAP1	ENST00000373503.7	protein_coding	125706971,125669818,125657651,125585555,125559633,125543059,125506310,125484443,125467972,125444501,125437394	125707212,125669907,125657799,125585727,125559809,125543168,125506417,125484583,125468109,125444598,125439012	Gene ID= ENSG00000119487.16 TPM= 8.41 Transcript Type= protein_coding
chr9	125437394	125707203	125437394	125707203	-	ENST00000350766.7@MAPKAP1	ENST00000350766.7	protein_coding	125706971,125672316,125669818,125657651,125585555,125559633,125543059,125484443,125467972,125444501,125437394	125707203,125672643,125669907,125657799,125585727,125559809,125543168,125484583,125468109,125444598,125439012	Gene ID= ENSG00000119487.16 TPM= 8.23 Transcript Type= protein_coding
chr9	125521468	125707231	125521468	125707231	-	ENST00000394060.7@MAPKAP1	ENST00000394060.7	protein_coding	125706971,125672316,125669818,125657651,125585555,125559633,125543059,125521468	125707231,125672643,125669907,125657799,125585727,125559809,125543168,125521765	Gene ID= ENSG00000119487.16 TPM= 7.44 Transcript Type= protein_coding
chr9	125439946	125442153	125439946	125442153	+	transcript3026.chr9.nnic@NA	transcript3026.chr9.nnic	NA	125439946	125442153	Gene ID= novel_gene_chr9_3027 TPM= 13.81 Transcript Type= NA
chr9	125747438	125967377	125747438	125967377	+	ENST00000373489.9@PBX3	ENST00000373489.9	protein_coding	125747438,125748550,125915686,125929655,125935472,125960684,125962102,125963012,125965831	125747653,125748623,125915927,125929845,125935607,125960849,125962214,125963101,125967377	Gene ID= ENSG00000167081.16 TPM= 18.94 Transcript Type= protein_coding
chr9	125747345	125967377	125747345	125967377	+	ENST00000342287.9@PBX3	ENST00000342287.9	protein_coding	125747345,125748550,125915686,125929655,125935472,125960684,125963012,125965831	125747653,125748623,125915927,125929845,125935607,125960849,125963101,125967377	Gene ID= ENSG00000167081.16 TPM= 8.85 Transcript Type= protein_coding
chr9	126804997	126835229	126804997	126835229	+	transcript3063.chr9.nnic@ZBTB43	transcript3063.chr9.nnic	protein_coding	126804997,126808793,126823480,126832487	126805132,126808915,126823541,126835229	Gene ID= ENSG00000169155.9 TPM= 4.25 Transcript Type= NA
chr9	126805006	126838210	126805006	126838210	+	ENST00000449886.5@ZBTB43	ENST00000449886.5	protein_coding	126805006,126832487	126805132,126838210	Gene ID= ENSG00000169155.9 TPM= 2.12 Transcript Type= protein_coding
chr9	126805015	126838210	126805015	126838210	+	ENST00000373464.4@ZBTB43	ENST00000373464.4	protein_coding	126805015,126808793,126832487	126805132,126808915,126838210	Gene ID= ENSG00000169155.9 TPM= 3.19 Transcript Type= protein_coding
chr9	126914766	127220112	126914766	127220112	+	transcript3078.chr9.nic@RALGPS1	transcript3078.chr9.nic	protein_coding	126914766,126962225,126965844,126977695,127034431,127050043,127052847,127069230,127166069,127168679,127174715,127195091,127210695,127212131,127212627,127212944,127214751,127218740	126915012,126962346,126965951,126977745,127034514,127050132,127052939,127069356,127166206,127168772,127174782,127195217,127210778,127212236,127212719,127213049,127214842,127220112	Gene ID= ENSG00000136828.18 TPM= 2.12 Transcript Type= NA
chr9	126914786	127184336	126914786	127184336	+	ENST00000394022.7@RALGPS1	ENST00000394022.7	protein_coding	126914786,126962225,126965844,126977695,127034431,127050043,127052847,127069230,127166069,127168679,127174715,127183867	126915012,126962346,126965951,126977745,127034514,127050132,127052939,127069356,127166206,127168772,127174782,127184336	Gene ID= ENSG00000136828.18 TPM= 1.06 Transcript Type= protein_coding
chr9	127177981	127184336	127177981	127184336	-	transcript3089.chr9.nnic@NA	transcript3089.chr9.nnic	NA	127184066,127180605,127179834,127177981	127184336,127180749,127180015,127179194	Gene ID= novel_gene_chr9_3090 TPM= 3.19 Transcript Type= NA
chr9	127225171	127393538	127225171	127393538	+	transcript3097.chr9.nic@GARNL3	transcript3097.chr9.nic	protein_coding	127225171,127243079,127264952,127291168,127311636,127313441,127318063,127320715,127325069,127332274,127333023,127335230,127336128,127338116,127339645,127342219,127344235,127345403,127348924,127353846,127354294,127355297,127357219,127365300,127383438,127385027,127387193,127388904,127390641,127393083	127225403,127243249,127265021,127291242,127311735,127313559,127318127,127320778,127325095,127332349,127333121,127335333,127336236,127338161,127339751,127342334,127344339,127345477,127349035,127353944,127354410,127355472,127357377,127365366,127383545,127385145,127387331,127389119,127390767,127393538	Gene ID= ENSG00000136895.18 TPM= 6.37 Transcript Type= NA
chr9	127264526	127393660	127264526	127393660	+	ENST00000373387.8@GARNL3	ENST00000373387.8	protein_coding	127264526,127291168,127311636,127313441,127318063,127320715,127325069,127332274,127333023,127335230,127336128,127338116,127339645,127342219,127344235,127345403,127348924,127353846,127354294,127355297,127357219,127365300,127383438,127385027,127387193,127388904,127390641,127393083	127265021,127291242,127311735,127313559,127318127,127320778,127325095,127332349,127333121,127335333,127336236,127338161,127339751,127342334,127344339,127345477,127349035,127353944,127354410,127355472,127357377,127365366,127383545,127385145,127387331,127389119,127390767,127393660	Gene ID= ENSG00000136895.18 TPM= 3.19 Transcript Type= protein_coding
chr9	127263662	127393547	127263662	127393547	+	ENST00000435213.6@GARNL3	ENST00000435213.6	protein_coding	127263662,127264952,127291168,127311636,127313441,127318063,127320715,127325069,127332274,127333023,127335230,127336128,127338116,127339645,127342219,127344235,127345403,127348924,127353846,127354294,127355297,127357219,127365300,127383438,127385027,127387193,127388904,127390641,127393083	127263999,127265021,127291242,127311735,127313559,127318127,127320778,127325095,127332349,127333121,127335333,127336236,127338161,127339751,127342334,127344339,127345477,127349035,127353944,127354410,127355472,127357377,127365366,127383545,127385145,127387331,127389119,127390767,127393547	Gene ID= ENSG00000136895.18 TPM= 1.06 Transcript Type= protein_coding
chr9	127361716	127393538	127361716	127393538	+	ENST00000481242.5@GARNL3	ENST00000481242.5	protein_coding	127361716,127383438,127385027,127387193,127388904,127390641,127393083	127365366,127383545,127385145,127387331,127389119,127390767,127393538	Gene ID= ENSG00000136895.18 TPM= 7.44 Transcript Type= retained_intron
chr9	127225225	127237612	127225225	127237612	+	transcript3113.chr9.nnic@GARNL3	transcript3113.chr9.nnic	protein_coding	127225225,127232330,127235703,127237153	127225403,127232450,127235891,127237612	Gene ID= ENSG00000136895.18 TPM= 2.12 Transcript Type= NA
chr9	127269788	127273301	127269788	127273301	-	transcript3123.chr9.nnic@NA	transcript3123.chr9.nnic	NA	127269788	127273301	Gene ID= novel_gene_chr9_3124 TPM= 2.12 Transcript Type= NA
chr9	127326766	127327828	127326766	127327828	+	transcript3119.chr9.nnic@NA	transcript3119.chr9.nnic	NA	127326766	127327828	Gene ID= novel_gene_chr9_3120 TPM= 2.12 Transcript Type= NA
chr9	127369843	127371832	127369843	127371832	+	transcript3121.chr9.nnic@NA	transcript3121.chr9.nnic	NA	127369843	127371832	Gene ID= novel_gene_chr9_3122 TPM= 2.12 Transcript Type= NA
chr9	127397142	127407898	127397142	127407898	+	ENST00000373371.7@SLC2A8	ENST00000373371.7	protein_coding	127397142,127397376,127397905,127399907,127402557,127403660,127403959,127404818,127405420,127407112	127397286,127397538,127398111,127400006,127402753,127403803,127404067,127404991,127405565,127407898	Gene ID= ENSG00000136856.17 TPM= 8.5 Transcript Type= protein_coding
chr9	127397145	127407668	127397145	127407668	+	transcript3133.chr9.nic@SLC2A8	transcript3133.chr9.nic	protein_coding	127397145,127397376,127399907,127402557,127403660,127403959,127404818,127405420,127407112	127397286,127397538,127400006,127402753,127403803,127404067,127404991,127405565,127407668	Gene ID= ENSG00000136856.17 TPM= 2.12 Transcript Type= NA
chr9	127397138	127407855	127397138	127407855	+	ENST00000610552.4@SLC2A8	ENST00000610552.4	protein_coding	127397138,127399907,127402557,127403660,127403959,127404818,127405420,127407112	127397286,127400006,127402753,127403803,127404067,127404991,127405565,127407855	Gene ID= ENSG00000136856.17 TPM= 3.19 Transcript Type= protein_coding
chr9	127400168	127402975	127400168	127402975	-	transcript3145.chr9.nnic@NA	transcript3145.chr9.nnic	NA	127400168	127402975	Gene ID= novel_gene_chr9_3146 TPM= 4.25 Transcript Type= NA
chr9	127447674	127451405	127447674	127451405	-	ENST00000497825.5@RPL12	ENST00000497825.5	protein_coding	127451050,127450731,127449610,127449281,127448337,127447877,127447674	127451405,127450804,127449708,127449362,127448423,127447989,127447726	Gene ID= ENSG00000197958.12 TPM= 6.37 Transcript Type= processed_transcript
chr9	127447674	127451405	127447674	127451405	-	ENST00000361436.9@RPL12	ENST00000361436.9	protein_coding	127451281,127450731,127449610,127449281,127448337,127447877,127447674	127451405,127450804,127449708,127449362,127448423,127447989,127447726	Gene ID= ENSG00000197958.12 TPM= 199.69 Transcript Type= protein_coding
chr9	127451468	127503499	127451468	127503499	+	transcript3153.chr9.nnic@LRSAM1	transcript3153.chr9.nnic	protein_coding	127451468,127451929,127454496,127454998,127455576,127457316,127459003,127460877,127461173,127462252,127467740,127473801,127478934,127479383,127479839,127481183,127482950,127485736,127487676,127489444,127491215,127492802,127495320,127495964,127497253,127501010,127502774	127451669,127452084,127454599,127455054,127455620,127457393,127459071,127460998,127461257,127462373,127467830,127473931,127478963,127479505,127479978,127481227,127483020,127485835,127487763,127489518,127491295,127492897,127495418,127496095,127497334,127501143,127503499	Gene ID= ENSG00000148356.13 TPM= 4.25 Transcript Type= NA
chr9	127451486	127503501	127451486	127503501	+	ENST00000300417.10@LRSAM1	ENST00000300417.10	protein_coding	127451486,127451929,127454496,127454998,127455576,127457316,127459003,127461173,127462252,127467740,127473801,127478934,127479383,127479839,127481183,127482950,127485736,127487676,127489444,127491215,127492802,127495320,127495964,127497253,127501010,127502774	127451669,127452084,127454599,127455054,127455620,127457393,127459071,127461257,127462373,127467830,127473931,127478963,127479505,127479978,127481227,127483020,127485835,127487763,127489518,127491295,127492897,127495418,127496095,127497334,127501143,127503501	Gene ID= ENSG00000148356.13 TPM= 49.92 Transcript Type= protein_coding
chr9	127451513	127503499	127451513	127503499	+	ENST00000323301.8@LRSAM1	ENST00000323301.8	protein_coding	127451513,127454496,127454998,127455576,127457316,127459003,127461173,127462252,127467740,127473801,127478934,127479383,127479839,127481183,127482950,127485736,127487676,127489444,127491215,127492802,127495320,127495964,127497253,127501010,127502774	127452084,127454599,127455054,127455620,127457393,127459071,127461257,127462373,127467830,127473931,127478963,127479505,127479978,127481227,127483020,127485835,127487763,127489518,127491295,127492897,127495418,127496095,127497334,127501143,127503499	Gene ID= ENSG00000148356.13 TPM= 22.31 Transcript Type= protein_coding
chr9	127505343	127569088	127505343	127569088	-	ENST00000373312.3@FAM129B	ENST00000373312.3	protein_coding	127568820,127531648,127527194,127525058,127523679,127517826,127517112,127516857,127510146,127508976,127508422,127508093,127507867,127505343	127569088,127531778,127527322,127525163,127523846,127517941,127517216,127517019,127510333,127509131,127508538,127508200,127507978,127507431	Gene ID= ENSG00000136830.11 TPM= 27.62 Transcript Type= protein_coding
chr9	127612188	127669336	127612188	127669336	+	transcript3177.chr9.nic@STXBP1	transcript3177.chr9.nic	protein_coding	127612188,127651603,127653715,127658375,127660030,127661102,127663205,127665247,127666166,127668080	127612440,127651652,127653796,127658451,127660108,127661205,127663353,127665331,127666296,127669336	Gene ID= ENSG00000136854.19 TPM= 2.12 Transcript Type= NA
chr9	127690134	127692715	127690134	127692715	+	ENST00000628768.1@STXBP1	ENST00000628768.1	protein_coding	127690134	127692715	Gene ID= ENSG00000136854.19 TPM= 6.37 Transcript Type= processed_transcript
chr9	127708482	127711679	127708482	127711679	-	transcript3185.chr9.nnic@NA	transcript3185.chr9.nnic	NA	127708482	127711679	Gene ID= novel_gene_chr9_3186 TPM= 5.31 Transcript Type= NA
chr9	127713510	127724873	127713510	127724873	-	ENST00000419060.5@PTRH1	ENST00000419060.5	protein_coding	127724737,127715544,127714975,127714603,127714379,127713510	127724873,127716959,127715194,127714702,127714424,127714282	Gene ID= ENSG00000187024.14 TPM= 5.31 Transcript Type= protein_coding
chr9	127713949	127715657	127713949	127715657	-	ENST00000543175.4@PTRH1	ENST00000543175.4	protein_coding	127715544,127714975,127714603,127714379,127713949	127715657,127715194,127714702,127714424,127714282	Gene ID= ENSG00000187024.14 TPM= 18.06 Transcript Type= protein_coding
chr9	127713972	127715604	127713972	127715604	-	ENST00000456267.5@PTRH1	ENST00000456267.5	protein_coding	127715544,127714975,127714603,127714379,127713972	127715604,127715194,127714702,127714424,127714189	Gene ID= ENSG00000187024.14 TPM= 1.06 Transcript Type= protein_coding
chr9	127731524	127735317	127731524	127735317	-	ENST00000373284.9@TOR2A	ENST00000373284.9	protein_coding	127735120,127734299,127733385,127732564,127731524	127735317,127734564,127733560,127732691,127732278	Gene ID= ENSG00000160404.17 TPM= 2.12 Transcript Type= protein_coding
chr9	127738318	127762418	127738318	127762418	-	ENST00000429553.5@SH2D3C	ENST00000429553.5	protein_coding	127762121,127761611,127751172,127749211,127747147,127744564,127742849,127741788,127740258,127739682,127738318	127762418,127761650,127751300,127749665,127747271,127745099,127742964,127741959,127740369,127739888,127738921	Gene ID= ENSG00000095370.19 TPM= 12.75 Transcript Type= protein_coding
chr9	127738317	127771438	127738317	127771438	-	ENST00000373277.8@SH2D3C	ENST00000373277.8	protein_coding	127771186,127761611,127751172,127749211,127747147,127744564,127742849,127741788,127740258,127739682,127738317	127771438,127761650,127751300,127749665,127747271,127745099,127742964,127741959,127740369,127739888,127738921	Gene ID= ENSG00000095370.19 TPM= 23.37 Transcript Type= protein_coding
chr9	127786049	127790787	127786049	127790787	+	ENST00000373264.4@CDK9	ENST00000373264.4	protein_coding	127786049,127786701,127787518,127787947,127788214,127788544,127789178	127786240,127786782,127787608,127788113,127788385,127788692,127790787	Gene ID= ENSG00000136807.13 TPM= 5.31 Transcript Type= protein_coding
chr9	127793910	127795089	127793910	127795089	-	transcript3273.chr9.nnic@NA	transcript3273.chr9.nnic	NA	127793910	127795089	Gene ID= novel_gene_chr9_3274 TPM= 4.25 Transcript Type= NA
chr9	127802862	127814506	127802862	127814506	+	transcript3205.chr9.nic@FPGS	transcript3205.chr9.nic	protein_coding	127802862,127804285,127804499,127804636,127806973,127807209,127807421,127807586,127808234,127808558,127808800,127809684,127810031,127810945,127813195,127814208	127803062,127804413,127804552,127804700,127807087,127807286,127807482,127807688,127808311,127808705,127808889,127809834,127810106,127811011,127813323,127814506	Gene ID= ENSG00000136877.14 TPM= 7.97 Transcript Type= NA
chr9	127803186	127814506	127803186	127814506	+	transcript3207.chr9.nic@FPGS	transcript3207.chr9.nic	protein_coding	127803186,127804285,127804499,127804636,127806973,127807209,127807421,127807586,127808234,127808558,127808800,127809684,127810031,127810945,127813195,127814208	127803404,127804413,127804552,127804700,127807087,127807286,127807482,127807688,127808311,127808705,127808889,127809834,127810106,127811011,127813323,127814506	Gene ID= ENSG00000136877.14 TPM= 3.72 Transcript Type= NA
chr9	127803208	127814059	127803208	127814059	+	ENST00000373225.7@FPGS	ENST00000373225.7	protein_coding	127803208,127804285,127804499,127804636,127806973,127807209,127807421,127807586,127808234,127808558,127808800,127809684,127810031,127810945,127813195	127803404,127804413,127804552,127804700,127807087,127807286,127807482,127807688,127808311,127808705,127808889,127809834,127810106,127811011,127814059	Gene ID= ENSG00000136877.14 TPM= 10.97 Transcript Type= protein_coding
chr9	127802858	127814081	127802858	127814081	+	ENST00000393706.6@FPGS	ENST00000393706.6	protein_coding	127802858,127804285,127804499,127804636,127806973,127807421,127807586,127808234,127808558,127808800,127809684,127810031,127810945,127813195	127803062,127804413,127804552,127804700,127807087,127807482,127807688,127808311,127808705,127808889,127809834,127810106,127811011,127814081	Gene ID= ENSG00000136877.14 TPM= 3.19 Transcript Type= protein_coding
chr9	127803186	127814059	127803186	127814059	+	transcript3236.chr9.nic@FPGS	transcript3236.chr9.nic	protein_coding	127803186,127804285,127804499,127804636,127806973,127807421,127807586,127808234,127808558,127808800,127809684,127810031,127810945,127813195	127803404,127804413,127804552,127804700,127807087,127807482,127807688,127808311,127808705,127808889,127809834,127810106,127811011,127814059	Gene ID= ENSG00000136877.14 TPM= 6.72 Transcript Type= NA
chr9	127802875	127814069	127802875	127814069	+	ENST00000373247.6@FPGS	ENST00000373247.6	protein_coding	127802875,127804285,127804499,127804636,127806973,127807209,127807421,127807586,127808234,127808558,127808800,127809684,127810031,127810945,127813195	127803062,127804413,127804552,127804700,127807087,127807286,127807482,127807688,127808311,127808705,127808889,127809834,127810106,127811011,127814069	Gene ID= ENSG00000136877.14 TPM= 50.27 Transcript Type= protein_coding
chr9	127795862	127796100	127795862	127796100	+	transcript3269.chr9.nnic@NA	transcript3269.chr9.nnic	NA	127795862	127796100	Gene ID= novel_gene_chr9_3270 TPM= 2.12 Transcript Type= NA
chr9	127815013	127847167	127815013	127847167	-	ENST00000480266.5@ENG	ENST00000480266.5	protein_coding	127846943,127843094,127829687,127826510,127825695,127825231,127824800,127824304,127819900,127819622,127818716,127818120,127817149,127815943,127815013	127847167,127843245,127829827,127826672,127825860,127825357,127824974,127824446,127820037,127819660,127818832,127818377,127817203,127816053,127815806	Gene ID= ENSG00000106991.13 TPM= 101.57 Transcript Type= protein_coding
chr9	127815012	127854756	127815012	127854756	-	ENST00000373203.8@ENG	ENST00000373203.8	protein_coding	127854289,127843094,127829687,127826510,127825695,127825231,127824800,127824304,127819900,127819622,127818716,127818120,127817149,127815943,127815012	127854756,127843245,127829827,127826672,127825860,127825357,127824974,127824446,127820037,127819660,127818832,127818377,127817203,127816053,127815806	Gene ID= ENSG00000106991.13 TPM= 471.42 Transcript Type= protein_coding
chr9	127815017	127854636	127815017	127854636	-	ENST00000344849.4@ENG	ENST00000344849.4	protein_coding	127854289,127843094,127829687,127826510,127825695,127825231,127824800,127824304,127819900,127819622,127818716,127818120,127817149,127815017	127854636,127843245,127829827,127826672,127825860,127825357,127824974,127824446,127820037,127819660,127818832,127818377,127817203,127816053	Gene ID= ENSG00000106991.13 TPM= 15.93 Transcript Type= protein_coding
chr9	127815015	127818007	127815015	127818007	-	transcript3275.chr9.nnic@NA	transcript3275.chr9.nnic	NA	127815015	127818007	Gene ID= novel_gene_chr9_3276 TPM= 25.28 Transcript Type= NA
chr9	127866480	127877743	127866480	127877743	-	ENST00000373176.5@AK1	ENST00000373176.5	protein_coding	127877623,127874611,127873026,127872690,127871823,127868321,127866480	127877743,127874649,127873061,127872853,127871939,127868512,127868076	Gene ID= ENSG00000106992.17 TPM= 73.64 Transcript Type= protein_coding
chr9	127885322	127899655	127885322	127899655	-	ENST00000373144.7@ST6GALNAC6	ENST00000373144.7	protein_coding	127899503,127896242,127894512,127890637,127887484,127885322	127899655,127896332,127894691,127891043,127887591,127886788	Gene ID= ENSG00000160408.14 TPM= 96.31 Transcript Type= protein_coding
chr9	127885322	127899646	127885322	127899646	-	ENST00000373142.5@ST6GALNAC6	ENST00000373142.5	protein_coding	127899503,127897956,127896242,127894512,127890637,127887484,127885322	127899646,127898010,127896332,127894691,127891043,127887591,127886784	Gene ID= ENSG00000160408.14 TPM= 7.08 Transcript Type= protein_coding
chr9	127907886	127917060	127907886	127917060	-	transcript3313.chr9.nnic@ST6GALNAC4	transcript3313.chr9.nnic	protein_coding	127916826,127916408,127914656,127912268,127909951,127908216,127907886	127917060,127916494,127914841,127912680,127910058,127908581,127908171	Gene ID= ENSG00000136840.18 TPM= 6.11 Transcript Type= NA
chr9	127907889	127917060	127907889	127917060	-	transcript3318.chr9.nnic@ST6GALNAC4	transcript3318.chr9.nnic	protein_coding	127916826,127916408,127914656,127912268,127909951,127908318,127907889	127917060,127916494,127914841,127912680,127910058,127908581,127908168	Gene ID= ENSG00000136840.18 TPM= 30.01 Transcript Type= NA
chr9	127907889	127917043	127907889	127917043	-	transcript3326.chr9.nnic@ST6GALNAC4	transcript3326.chr9.nnic	protein_coding	127916826,127914656,127912268,127909951,127908318,127907889	127917043,127914841,127912680,127910058,127908581,127908168	Gene ID= ENSG00000136840.18 TPM= 8.5 Transcript Type= NA
chr9	127907886	127917060	127907886	127917060	-	transcript3334.chr9.nic@ST6GALNAC4	transcript3334.chr9.nic	protein_coding	127916826,127916408,127914656,127912268,127907886	127917060,127916494,127914841,127912680,127908581	Gene ID= ENSG00000136840.18 TPM= 3.45 Transcript Type= NA
chr9	127907886	127917026	127907886	127917026	-	ENST00000335791.9@ST6GALNAC4	ENST00000335791.9	protein_coding	127916826,127916408,127914656,127912268,127909951,127907886	127917026,127916494,127914841,127912680,127910058,127908581	Gene ID= ENSG00000136840.18 TPM= 61.87 Transcript Type= protein_coding
chr9	127935099	127938484	127935099	127938484	-	ENST00000314392.12@DPM2	ENST00000314392.12	protein_coding	127937818,127937434,127936553,127935099	127938484,127937523,127936655,127935780	Gene ID= ENSG00000136908.17 TPM= 28.68 Transcript Type= protein_coding
chr9	127935099	127937853	127935099	127937853	-	transcript3338.chr9.nnic@DPM2	transcript3338.chr9.nnic	protein_coding	127937818,127936553,127935099	127937853,127936655,127935780	Gene ID= ENSG00000136908.17 TPM= 5.31 Transcript Type= NA
chr9	127935099	127937846	127935099	127937846	-	transcript3340.chr9.nic@DPM2	transcript3340.chr9.nic	protein_coding	127936553,127935099	127937846,127935780	Gene ID= ENSG00000136908.17 TPM= 3.19 Transcript Type= NA
chr9	127935099	127937826	127935099	127937826	-	ENST00000495270.1@DPM2	ENST00000495270.1	protein_coding	127937818,127936553,127935099	127937826,127937523,127935780	Gene ID= ENSG00000136908.17 TPM= 9.56 Transcript Type= retained_intron
chr9	127942039	127949332	127942039	127949332	+	transcript3346.chr9.nnic@NA	transcript3346.chr9.nnic	NA	127942039,127944615,127944777,127945360,127945649,127948076	127943239,127944686,127944896,127945562,127945760,127949332	Gene ID= novel_gene_chr9_3347 TPM= 10.62 Transcript Type= NA
chr9	127978526	127980691	127978526	127980691	-	transcript3350.chr9.nnic@NA	transcript3350.chr9.nnic	NA	127978526	127980691	Gene ID= novel_gene_chr9_3351 TPM= 7.44 Transcript Type= NA
chr9	128068201	128109244	128068201	128109244	+	ENST00000373068.6@SLC25A25	ENST00000373068.6	protein_coding	128068201,128101096,128101309,128102370,128103681,128105729,128106150,128106353,128107029,128107260	128068580,128101222,128101396,128102481,128103839,128105881,128106257,128106520,128107179,128109244	Gene ID= ENSG00000148339.12 TPM= 7.44 Transcript Type= protein_coding
chr9	128098304	128109245	128098304	128109245	+	ENST00000373064.9@SLC25A25	ENST00000373064.9	protein_coding	128098304,128101096,128101309,128102370,128103681,128105729,128106150,128106353,128107029,128107260	128098725,128101222,128101396,128102481,128103839,128105881,128106257,128106520,128107179,128109245	Gene ID= ENSG00000148339.12 TPM= 4.25 Transcript Type= protein_coding
chr9	128120693	128128462	128120693	128128462	-	ENST00000338961.10@PTGES2	ENST00000338961.10	protein_coding	128127439,128125244,128124492,128123702,128122934,128122362,128120693	128128462,128125441,128124550,128123851,128123134,128122479,128121273	Gene ID= ENSG00000148334.14 TPM= 479.78 Transcript Type= protein_coding
chr9	128120723	128127717	128120723	128127717	-	ENST00000496594.5@PTGES2	ENST00000496594.5	protein_coding	128127439,128125244,128124779,128124492,128123702,128122362,128120723	128127717,128125441,128124871,128124550,128123851,128123134,128121273	Gene ID= ENSG00000148334.14 TPM= 3.4 Transcript Type= retained_intron
chr9	128160260	128163928	128160260	128163928	+	ENST00000372994.1@C9orf16	ENST00000372994.1	protein_coding	128160260,128163443	128160486,128163928	Gene ID= ENSG00000171159.4 TPM= 108.34 Transcript Type= protein_coding
chr9	128166071	128191601	128166071	128191601	-	transcript3389.chr9.nic@CIZ1	transcript3389.chr9.nic	protein_coding	128191432,128190688,128190329,128187863,128185547,128180721,128180415,128179073,128178709,128178369,128177566,128176351,128170020,128169406,128169052,128167095,128166759,128166071	128191601,128190862,128190444,128187934,128185776,128180814,128180523,128179415,128178904,128178490,128177763,128176475,128170107,128169519,128169201,128167164,128166880,128166406	Gene ID= ENSG00000148337.20 TPM= 19.68 Transcript Type= NA
chr9	128166071	128191601	128166071	128191601	-	transcript3394.chr9.nic@CIZ1	transcript3394.chr9.nic	protein_coding	128191432,128190688,128190329,128187863,128185547,128180721,128180415,128178709,128178369,128177566,128176351,128170020,128169406,128169052,128167095,128166759,128166071	128191601,128190862,128190444,128187934,128185776,128180799,128180523,128179415,128178490,128177763,128176475,128170107,128169519,128169201,128167164,128166880,128166406	Gene ID= ENSG00000148337.20 TPM= 6.14 Transcript Type= NA
chr9	128166071	128191601	128166071	128191601	-	transcript3400.chr9.nic@CIZ1	transcript3400.chr9.nic	protein_coding	128191432,128190688,128185547,128180721,128180415,128178709,128178369,128177566,128176351,128170020,128169406,128169052,128167095,128166759,128166071	128191601,128190862,128185776,128180814,128180523,128179415,128178490,128177763,128176475,128170107,128169519,128169201,128167164,128166880,128166406	Gene ID= ENSG00000148337.20 TPM= 9.69 Transcript Type= NA
chr9	128166069	128191572	128166069	128191572	-	ENST00000629610.2@CIZ1	ENST00000629610.2	protein_coding	128191432,128190688,128187863,128185547,128180721,128180415,128178709,128178369,128177566,128176351,128170020,128169406,128169052,128167095,128166759,128166069	128191572,128190862,128187934,128185776,128180814,128180523,128179415,128178490,128177763,128176475,128170107,128169519,128169201,128167164,128166880,128166406	Gene ID= ENSG00000148337.20 TPM= 29.87 Transcript Type= protein_coding
chr9	128166073	128191589	128166073	128191589	-	ENST00000372938.9@CIZ1	ENST00000372938.9	protein_coding	128191432,128190688,128190329,128187863,128185547,128180721,128180415,128178709,128178369,128177566,128176351,128170020,128169406,128169052,128167095,128166759,128166073	128191589,128190862,128190444,128187934,128185776,128180814,128180523,128179415,128178490,128177763,128176475,128170107,128169519,128169201,128167164,128166880,128166406	Gene ID= ENSG00000148337.20 TPM= 45.59 Transcript Type= protein_coding
chr9	128166066	128191589	128166066	128191589	-	ENST00000357558.9@CIZ1	ENST00000357558.9	protein_coding	128191432,128190688,128190329,128187863,128185547,128180721,128180415,128178989,128178709,128178369,128177566,128176351,128170020,128169406,128169052,128167095,128166759,128166066	128191589,128190862,128190444,128187934,128185776,128180814,128180523,128179415,128178904,128178490,128177763,128176475,128170107,128169519,128169201,128167164,128166880,128166406	Gene ID= ENSG00000148337.20 TPM= 4.81 Transcript Type= protein_coding
chr9	128255829	128275948	128255829	128275948	-	transcript3406.chr9.nic@GOLGA2	transcript3406.chr9.nic	protein_coding	128275893,128273850,128272785,128268420,128268117,128267934,128267458,128267194,128266287,128265970,128265788,128265585,128263034,128262563,128261668,128261454,128261172,128260465,128260076,128259167,128259007,128258455,128257980,128257790,128257601,128257369,128255829	128275948,128273972,128272865,128268524,128268160,128267997,128267517,128267274,128266325,128266020,128265881,128265691,128263092,128262704,128261757,128261561,128261259,128260802,128260189,128259391,128259082,128258570,128258198,128257892,128257707,128257525,128257281	Gene ID= ENSG00000167110.17 TPM= 15.22 Transcript Type= NA
chr9	128255829	128275947	128255829	128275947	-	transcript3410.chr9.nic@GOLGA2	transcript3410.chr9.nic	protein_coding	128275893,128273850,128272785,128268420,128268117,128267934,128267458,128266287,128265970,128265788,128265585,128263034,128262563,128261668,128261454,128261172,128260465,128260076,128259167,128259007,128258455,128257980,128257790,128257601,128257369,128255829	128275947,128273972,128272865,128268524,128268160,128267997,128267517,128266325,128266020,128265881,128265691,128263092,128262704,128261757,128261561,128261259,128260802,128260189,128259391,128259082,128258570,128258198,128257892,128257707,128257525,128257281	Gene ID= ENSG00000167110.17 TPM= 13.81 Transcript Type= NA
chr9	128276222	128288990	128276222	128288990	+	ENST00000608796.5@SWI5	ENST00000608796.5	protein_coding	128276222,128276587,128284510,128285939,128288652	128276402,128276755,128284631,128286033,128288990	Gene ID= ENSG00000175854.11 TPM= 6.37 Transcript Type= protein_coding
chr9	128276244	128288989	128276244	128288989	+	ENST00000418976.1@SWI5	ENST00000418976.1	protein_coding	128276244,128276707,128284510,128285939,128288652	128276402,128276755,128284631,128286033,128288989	Gene ID= ENSG00000175854.11 TPM= 18.06 Transcript Type= protein_coding
chr9	128309109	128322762	128309109	128322762	-	transcript3425.chr9.nic@TRUB2	transcript3425.chr9.nic	protein_coding	128322300,128321599,128317152,128315567,128313808,128310887,128309109	128322762,128321730,128317226,128315628,128313889,128311601,128309875	Gene ID= ENSG00000167112.9 TPM= 8.5 Transcript Type= NA
chr9	128330271	128334072	128330271	128334072	+	transcript3430.chr9.nic@COQ4	transcript3430.chr9.nic	protein_coding	128330271,128332850,128333474	128332282,128332943,128334072	Gene ID= ENSG00000167113.10 TPM= 2.66 Transcript Type= NA
chr9	128330412	128334068	128330412	128334068	+	ENST00000461102.1@COQ4	ENST00000461102.1	protein_coding	128330412,128333474	128332943,128334068	Gene ID= ENSG00000167113.10 TPM= 4.78 Transcript Type= processed_transcript
chr9	128322536	128334072	128322536	128334072	+	ENST00000300452.7@COQ4	ENST00000300452.7	protein_coding	128322536,128323016,128325143,128325779,128332153,128332850,128333474	128322928,128323147,128325239,128325881,128332282,128332943,128334072	Gene ID= ENSG00000167113.10 TPM= 23.37 Transcript Type= protein_coding
chr9	128322544	128323586	128322544	128323586	+	ENST00000609948.1@COQ4	ENST00000609948.1	protein_coding	128322544,128323016	128322928,128323586	Gene ID= ENSG00000167113.10 TPM= 8.5 Transcript Type= protein_coding
chr9	128340480	128361217	128340480	128361217	+	transcript3433.chr9.nnic@SLC27A4	transcript3433.chr9.nnic	protein_coding	128340480,128340754,128343127,128345155,128348545,128350312,128350484,128352638,128353025,128353415,128355053,128355398,128355650,128360334	128340617,128340838,128343293,128345549,128348703,128350381,128350575,128352747,128353234,128353541,128355190,128355562,128355796,128361217	Gene ID= ENSG00000167114.12 TPM= 2.12 Transcript Type= NA
chr9	128340480	128361223	128340480	128361223	+	transcript3436.chr9.nnic@SLC27A4	transcript3436.chr9.nnic	protein_coding	128340480,128343127,128345155,128348545,128350312,128350484,128352638,128353025,128353415,128355053,128355398,128355650,128360415	128340838,128343293,128345549,128348703,128350381,128350575,128352747,128353234,128353541,128355190,128355562,128355796,128361223	Gene ID= ENSG00000167114.12 TPM= 4.25 Transcript Type= NA
chr9	128340671	128357112	128340671	128357112	+	transcript3438.chr9.nic@SLC27A4	transcript3438.chr9.nic	protein_coding	128340671,128343127,128345155,128348545,128350312,128350484,128352638,128353025,128353415,128355053,128355398,128355650	128340838,128343293,128345549,128348703,128350381,128350575,128352747,128353234,128353541,128355190,128355562,128357112	Gene ID= ENSG00000167114.12 TPM= 2.12 Transcript Type= NA
chr9	128340565	128361217	128340565	128361217	+	transcript3439.chr9.nic@SLC27A4	transcript3439.chr9.nic	protein_coding	128340565,128343127,128345155,128348545,128350312,128350484,128352638,128353025,128355053,128355398,128355650,128360334	128340838,128343293,128345549,128348703,128350381,128350575,128352747,128353541,128355190,128355562,128355796,128361217	Gene ID= ENSG00000167114.12 TPM= 3.19 Transcript Type= NA
chr9	128340480	128361217	128340480	128361217	+	transcript3440.chr9.nnic@SLC27A4	transcript3440.chr9.nnic	protein_coding	128340480,128343127,128345155,128348545,128352638,128353025,128353415,128355053,128355398,128355650,128360334	128340838,128343293,128345549,128348703,128352747,128353234,128353541,128355190,128355562,128355796,128361217	Gene ID= ENSG00000167114.12 TPM= 3.19 Transcript Type= NA
chr9	128340728	128361470	128340728	128361470	+	ENST00000300456.4@SLC27A4	ENST00000300456.4	protein_coding	128340728,128343127,128345155,128348545,128350312,128350484,128352638,128353025,128353415,128355053,128355398,128355650,128360334	128340838,128343293,128345549,128348703,128350381,128350575,128352747,128353234,128353541,128355190,128355562,128355796,128361470	Gene ID= ENSG00000167114.12 TPM= 3.19 Transcript Type= protein_coding
chr9	128371361	128390734	128371361	128390734	+	ENST00000372850.5@URM1	ENST00000372850.5	protein_coding	128371361,128378036,128387816	128371415,128378106,128390734	Gene ID= ENSG00000167118.10 TPM= 23.37 Transcript Type= protein_coding
chr9	128420480	128437347	128420480	128437347	+	ENST00000372838.8@CERCAM	ENST00000372838.8	protein_coding	128420480,128422868,128423146,128424138,128424410,128428302,128428757,128428930,128431171,128434102,128434410,128435653,128436849	128421074,128422978,128423263,128424272,128424614,128428421,128428833,128429036,128431303,128434229,128434613,128435905,128437347	Gene ID= ENSG00000167123.18 TPM= 20.18 Transcript Type= protein_coding
chr9	128420829	128432010	128420829	128432010	+	transcript3450.chr9.nic@CERCAM	transcript3450.chr9.nic	protein_coding	128420829,128422868,128423146,128424138,128424410,128428302,128428757,128428930,128431171	128421074,128422978,128423263,128424272,128424614,128428421,128428833,128429036,128432010	Gene ID= ENSG00000167123.18 TPM= 2.12 Transcript Type= NA
chr9	128456006	128501292	128456006	128501292	+	ENST00000351030.7@ODF2	ENST00000351030.7	protein_coding	128456006,128459567,128460513,128460942,128469183,128471308,128472913,128473610,128481580,128482816,128483938,128484701,128485365,128487890,128492426,128492701,128494510,128496041,128498413,128499001,128500067	128456255,128459657,128460666,128461067,128469353,128471468,128473042,128473741,128481651,128482887,128484054,128484886,128485474,128488025,128492536,128492805,128494668,128496141,128498575,128499126,128501292	Gene ID= ENSG00000136811.16 TPM= 4.25 Transcript Type= protein_coding
chr9	128456126	128494836	128456126	128494836	+	transcript3454.chr9.nic@ODF2	transcript3454.chr9.nic	protein_coding	128456126,128459567,128460513,128460942,128469183,128471308,128472913,128473610,128481580,128482816,128483938,128484701,128485365,128487890,128492426,128492701,128494510	128456255,128459657,128460666,128461010,128469353,128471468,128473042,128473741,128481651,128482887,128484054,128484886,128485474,128488025,128492536,128492805,128494836	Gene ID= ENSG00000136811.16 TPM= 2.12 Transcript Type= NA
chr9	128456126	128494836	128456126	128494836	+	transcript3455.chr9.nic@ODF2	transcript3455.chr9.nic	protein_coding	128456126,128459567,128460513,128460942,128469183,128471308,128472913,128473610,128481580,128482816,128483938,128484701,128485365,128487890,128492426,128492701,128494510	128456255,128459657,128460666,128461067,128469353,128471468,128473042,128473741,128481651,128482887,128484054,128484886,128485474,128488025,128492536,128492805,128494836	Gene ID= ENSG00000136811.16 TPM= 2.12 Transcript Type= NA
chr9	128504693	128542288	128504693	128542288	+	transcript3459.chr9.nic@GLE1	transcript3459.chr9.nic	protein_coding	128504693,128508876,128515529,128522668,128523280,128523592,128525192,128527179,128527456,128532665,128533513,128533761,128536355,128537986,128539616,128540275,128541102	128504904,128509097,128515639,128522816,128523340,128523846,128525423,128527291,128527525,128532691,128533655,128533951,128536484,128538090,128539698,128540338,128542288	Gene ID= ENSG00000119392.14 TPM= 7.44 Transcript Type= NA
chr9	128504700	128542288	128504700	128542288	+	ENST00000309971.8@GLE1	ENST00000309971.8	protein_coding	128504700,128508876,128515529,128522668,128523280,128523592,128525192,128527179,128527456,128533513,128533761,128536355,128537986,128539616,128540275,128541102	128504904,128509097,128515639,128522816,128523340,128523846,128525423,128527291,128527525,128533655,128533951,128536484,128538090,128539698,128540338,128542288	Gene ID= ENSG00000119392.14 TPM= 29.74 Transcript Type= protein_coding
chr9	128552571	128633662	128552571	128633662	+	transcript3468.chr9.nic@SPTAN1	transcript3468.chr9.nic	protein_coding	128552571,128566738,128568772,128574675,128575199,128576823,128577129,128577352,128578110,128579637,128580922,128581782,128582479,128582694,128583077,128583788,128584282,128584721,128585748,128587606,128588809,128591477,128594175,128598400,128598963,128600080,128603543,128604326,128605034,128605296,128607604,128607852,128608130,128608874,128609122,128609651,128611714,128612109,128613381,128615632,128617640,128617987,128618871,128621158,128624328,128625103,128625769,128626391,128627386,128627925,128629125,128630321,128632127,128632431,128632572,128632808,128633209	128552696,128566977,128568897,128574815,128575345,128576956,128577273,128577506,128578245,128579738,128581059,128581892,128582556,128582849,128583281,128583969,128584525,128584843,128585965,128587698,128588943,128591625,128594373,128598504,128598986,128600115,128603590,128604417,128605178,128605477,128607703,128608049,128608276,128608977,128609284,128609665,128611845,128612246,128613485,128615840,128617760,128618108,128619003,128621256,128624487,128625179,128625978,128626687,128627498,128627942,128629187,128630375,128632323,128632484,128632718,128632955,128633662	Gene ID= ENSG00000197694.15 TPM= 106.4 Transcript Type= NA
chr9	128552593	128633662	128552593	128633662	+	ENST00000358161.9@SPTAN1	ENST00000358161.9	protein_coding	128552593,128566738,128568772,128574675,128575199,128576823,128577129,128577352,128578110,128579637,128580922,128581782,128582479,128582694,128583077,128583788,128584282,128584721,128585748,128587606,128588809,128591477,128594175,128598400,128598963,128600080,128603543,128604326,128605034,128605296,128607604,128607852,128608130,128608874,128609122,128611714,128612109,128613381,128615632,128617640,128617987,128618871,128621158,128624328,128625103,128625769,128626391,128627386,128627925,128630321,128632127,128632431,128632572,128632808,128633209	128552696,128566977,128568897,128574815,128575345,128576956,128577273,128577506,128578245,128579738,128581059,128581892,128582556,128582849,128583281,128583969,128584525,128584843,128585965,128587698,128588943,128591625,128594373,128598504,128598986,128600115,128603590,128604417,128605178,128605477,128607703,128608049,128608276,128608977,128609284,128611845,128612246,128613485,128615840,128617760,128618108,128619003,128621256,128624487,128625179,128625978,128626687,128627498,128627942,128630375,128632323,128632484,128632718,128632955,128633662	Gene ID= ENSG00000197694.15 TPM= 19.3 Transcript Type= protein_coding
chr9	128629660	128633659	128629660	128633659	+	ENST00000625980.2@SPTAN1	ENST00000625980.2	protein_coding	128629660,128632127,128632431,128632572,128632808,128633209	128630375,128632323,128632484,128632718,128632955,128633659	Gene ID= ENSG00000197694.15 TPM= 12.4 Transcript Type= retained_intron
chr9	128552587	128553336	128552587	128553336	+	transcript3499.chr9.nnic@NA	transcript3499.chr9.nnic	NA	128552587	128553336	Gene ID= novel_gene_chr9_3500 TPM= 6.37 Transcript Type= NA
chr9	128594431	128596180	128594431	128596180	-	transcript3501.chr9.nnic@NA	transcript3501.chr9.nnic	NA	128594431	128596180	Gene ID= novel_gene_chr9_3502 TPM= 3.19 Transcript Type= NA
chr9	128633661	128656787	128633661	128656787	-	ENST00000372715.6@WDR34	ENST00000372715.6	protein_coding	128656541,128640691,128636918,128636281,128635658,128635092,128634689,128634226,128633661	128656787,128640939,128637027,128636438,128635767,128635259,128634921,128634383,128633982	Gene ID= ENSG00000119333.11 TPM= 40.19 Transcript Type= protein_coding
chr9	128633661	128656688	128633661	128656688	-	transcript3485.chr9.nic@WDR34	transcript3485.chr9.nic	protein_coding	128656541,128640691,128636918,128635092,128634689,128634226,128633661	128656688,128640939,128637027,128636438,128634921,128634383,128633982	Gene ID= ENSG00000119333.11 TPM= 24.79 Transcript Type= NA
chr9	128633661	128636184	128633661	128636184	-	transcript3490.chr9.nnic@WDR34	transcript3490.chr9.nnic	protein_coding	128636136,128635658,128635092,128634689,128634226,128633661	128636184,128635767,128635259,128634921,128634383,128633982	Gene ID= ENSG00000119333.11 TPM= 17.57 Transcript Type= NA
chr9	128633661	128636706	128633661	128636706	-	transcript3491.chr9.nic@WDR34	transcript3491.chr9.nic	protein_coding	128636281,128635658,128635092,128634689,128634226,128633661	128636706,128635767,128635259,128634921,128634383,128633982	Gene ID= ENSG00000119333.11 TPM= 8.54 Transcript Type= NA
chr9	128689226	128696388	128689226	128696388	+	ENST00000322030.12@SET	ENST00000322030.12	protein_coding	128689226,128691170,128691858,128692662,128692868,128693638,128693896,128694641	128689655,128691227,128692000,128692765,128692981,128693808,128694042,128696388	Gene ID= ENSG00000119335.16 TPM= 80.19 Transcript Type= protein_coding
chr9	128702523	128720918	128702523	128720918	+	ENST00000291906.4@PKN3	ENST00000291906.4	protein_coding	128702523,128705303,128705734,128706713,128706896,128707222,128713052,128713278,128713499,128714046,128714197,128714562,128714798,128715172,128715369,128716747,128718325,128718549,128719686,128719910,128720203,128720394	128702939,128705543,128705879,128706824,128707023,128707405,128713198,128713387,128713642,128714121,128714365,128714664,128714865,128715235,128715460,128716923,128718387,128718625,128719828,128720017,128720283,128720918	Gene ID= ENSG00000160447.6 TPM= 7.44 Transcript Type= protein_coding
chr9	128720869	128724106	128720869	128724106	-	ENST00000372663.8@ZDHHC12	ENST00000372663.8	protein_coding	128723994,128722438,128722009,128721651,128720869	128724106,128722574,128722086,128721817,128721502	Gene ID= ENSG00000160446.18 TPM= 20.18 Transcript Type= protein_coding
chr9	128729786	128771948	128729786	128771948	-	transcript3525.chr9.nic@ZER1	transcript3525.chr9.nic	protein_coding	128771815,128755408,128753809,128753164,128752673,128751413,128751122,128750616,128742530,128741800,128741535,128740772,128739931,128735334,128733426,128729786	128771948,128755659,128753959,128753600,128752849,128751527,128751268,128750789,128742745,128741841,128741654,128740887,128740119,128735431,128733528,128731394	Gene ID= ENSG00000160445.10 TPM= 25.49 Transcript Type= NA
chr9	128729786	128771893	128729786	128771893	-	ENST00000291900.6@ZER1	ENST00000291900.6	protein_coding	128771581,128755408,128753809,128753164,128752673,128751413,128751122,128750616,128742530,128741800,128741535,128740772,128739931,128735334,128733426,128729786	128771893,128755659,128753959,128753600,128752849,128751527,128751268,128750789,128742745,128741841,128741654,128740887,128740119,128735431,128733528,128731394	Gene ID= ENSG00000160445.10 TPM= 71.16 Transcript Type= protein_coding
chr9	128787204	128810432	128787204	128810432	+	ENST00000372648.9@TBC1D13	ENST00000372648.9	protein_coding	128787204,128788334,128790735,128791380,128791594,128792492,128797055,128803250,128803956,128805859,128806254,128807814	128787376,128788407,128790775,128791441,128791693,128792574,128797214,128803460,128804119,128806019,128806311,128810432	Gene ID= ENSG00000107021.15 TPM= 25.49 Transcript Type= protein_coding
chr9	128818466	128822676	128818466	128822676	+	transcript3553.chr9.nnic@ENDOG	transcript3553.chr9.nnic	protein_coding	128818466,128820739,128821438,128822328	128819185,128820848,128821814,128822676	Gene ID= ENSG00000167136.6 TPM= 5.31 Transcript Type= NA
chr9	128818474	128822677	128818474	128822677	+	ENST00000372642.4@ENDOG	ENST00000372642.4	protein_coding	128818474,128820739,128822328	128819185,128820848,128822677	Gene ID= ENSG00000167136.6 TPM= 105.15 Transcript Type= protein_coding
chr9	128819651	128829821	128819651	128829821	-	ENST00000361256.9@SPOUT1	ENST00000361256.9	protein_coding	128829745,128829110,128828735,128827032,128826540,128826384,128826022,128824977,128824771,128824072,128823747,128819651	128829821,128829155,128828860,128827191,128826629,128826433,128826152,128825049,128824869,128824174,128823894,128822833	Gene ID= ENSG00000198917.12 TPM= 12.75 Transcript Type= protein_coding
chr9	128822070	128829820	128822070	128829820	-	transcript3551.chr9.nic@SPOUT1	transcript3551.chr9.nic	protein_coding	128829745,128829110,128828735,128827032,128826540,128826022,128824977,128824771,128824072,128823747,128822070	128829820,128829155,128828860,128827191,128826629,128826433,128825049,128824869,128824174,128823894,128822833	Gene ID= ENSG00000198917.12 TPM= 5.31 Transcript Type= NA
chr9	128822091	128829820	128822091	128829820	-	transcript3552.chr9.nic@SPOUT1	transcript3552.chr9.nic	protein_coding	128829745,128829110,128828735,128827032,128826540,128826384,128826022,128824977,128824771,128824072,128822091	128829820,128829155,128828860,128827191,128826629,128826433,128826152,128825049,128824869,128824174,128822833	Gene ID= ENSG00000198917.12 TPM= 4.25 Transcript Type= NA
chr9	128833113	128881947	128833113	128881947	-	transcript3558.chr9.nnic@KYAT1	transcript3558.chr9.nnic	protein_coding	128881897,128846680,128845605,128845353,128842654,128838218,128838051,128837685,128836802,128835997,128835779,128835481,128835323,128833740,128833113	128881947,128846859,128845886,128845517,128842801,128838367,128838137,128837813,128836922,128836073,128835868,128835667,128835402,128833826,128833643	Gene ID= ENSG00000171097.13 TPM= 4.78 Transcript Type= NA
chr9	128833113	128882053	128833113	128882053	-	ENST00000302586.7@KYAT1	ENST00000302586.7	protein_coding	128881897,128845353,128842654,128838218,128838051,128837685,128836802,128835997,128835779,128835481,128835323,128833740,128833113	128882053,128845411,128842801,128838367,128838137,128837813,128836922,128836073,128835868,128835667,128835402,128833826,128833643	Gene ID= ENSG00000171097.13 TPM= 16.46 Transcript Type= protein_coding
chr9	128882112	128918039	128882112	128918039	+	ENST00000372600.8@LRRC8A	ENST00000372600.8	protein_coding	128882112,128886015,128907157,128916096	128882250,128886121,128909321,128918039	Gene ID= ENSG00000136802.11 TPM= 47.8 Transcript Type= protein_coding
chr9	128920895	128942037	128920895	128942037	+	ENST00000372592.7@PHYHD1	ENST00000372592.7	protein_coding	128920895,128921930,128922283,128927038,128933782,128934011,128936448,128936583,128937757,128940369,128940599,128941445,128941668	128921668,128922047,128922356,128927196,128933857,128934058,128936503,128936645,128937778,128940497,128940715,128941571,128942037	Gene ID= ENSG00000175287.18 TPM= 9.56 Transcript Type= protein_coding
chr9	128945530	128947619	128945530	128947619	-	ENST00000372586.3@DOLK	ENST00000372586.3	protein_coding	128945530	128947619	Gene ID= ENSG00000175283.7 TPM= 52.05 Transcript Type= protein_coding
chr9	128988021	129007096	128988021	129007096	+	transcript3574.chr9.nnic@NUP188	transcript3574.chr9.nnic	protein_coding	128988021,128993197,128993525,128994373,128994856,128995319,128998151,128998538,128999172,128999624,129001529,129001884,129002817,129003317,129005147,129005303,129005645,129006050,129006239,129006502	128988186,128993403,128993694,128994442,128994923,128995514,128998228,128998623,128999317,128999805,129001729,129001976,129002975,129003454,129005221,129005530,129005776,129006123,129006368,129007096	Gene ID= ENSG00000095319.14 TPM= 2.12 Transcript Type= NA
chr9	128947699	129007096	128947699	129007096	+	ENST00000372577.2@NUP188	ENST00000372577.2	protein_coding	128947699,128949189,128952773,128956350,128956952,128958010,128958802,128959015,128968506,128969400,128970758,128973160,128979262,128980606,128981264,128982549,128982902,128983293,128983474,128984900,128986558,128986809,128987589,128988047,128990120,128993197,128993525,128994373,128994856,128995319,128998151,128998538,128999172,128999624,129001529,129001884,129002817,129003317,129005147,129005303,129005645,129006050,129006239,129006502	128947751,128949243,128952846,128956434,128957032,128958054,128958894,128959134,128968717,128969514,128970958,128973249,128979327,128980725,128981390,128982701,128983028,128983380,128983550,128985014,128986678,128986875,128987717,128988186,128990226,128993403,128993694,128994442,128994923,128995514,128998228,128998623,128999317,128999805,129001729,129001976,129002975,129003454,129005221,129005530,129005776,129006123,129006368,129007096	Gene ID= ENSG00000095319.14 TPM= 66.92 Transcript Type= protein_coding
chr9	129008039	129028331	129008039	129028331	-	transcript3591.chr9.nic@SH3GLB2	transcript3591.chr9.nic	protein_coding	129028092,129022282,129021091,129014771,129014411,129010670,129010120,129009771,129009106,129008039	129028331,129022423,129021219,129014904,129014503,129012298,129010209,129009871,129009346,129008791	Gene ID= ENSG00000148341.17 TPM= 5.31 Transcript Type= NA
chr9	129008039	129028321	129008039	129028321	-	transcript3593.chr9.nic@SH3GLB2	transcript3593.chr9.nic	protein_coding	129028092,129014771,129014411,129012236,129010670,129010120,129009771,129009106,129008039	129028321,129014904,129014503,129012298,129010693,129010209,129009871,129009346,129008791	Gene ID= ENSG00000148341.17 TPM= 8.5 Transcript Type= NA
chr9	129008039	129028331	129008039	129028331	-	transcript3594.chr9.nic@SH3GLB2	transcript3594.chr9.nic	protein_coding	129028092,129022282,129021091,129014771,129014411,129010120,129009771,129009106,129008039	129028331,129022423,129021219,129014904,129014503,129012298,129009871,129009346,129008791	Gene ID= ENSG00000148341.17 TPM= 8.5 Transcript Type= NA
chr9	129007036	129028300	129007036	129028300	-	ENST00000372564.7@SH3GLB2	ENST00000372564.7	protein_coding	129028092,129022282,129021091,129014771,129014411,129012236,129010670,129010120,129009771,129009106,129007036	129028300,129022423,129021219,129014904,129014503,129012298,129010693,129010209,129009871,129009346,129008791	Gene ID= ENSG00000148341.17 TPM= 5.31 Transcript Type= protein_coding
chr9	129008039	129028279	129008039	129028279	-	ENST00000372554.8@SH3GLB2	ENST00000372554.8	protein_coding	129028092,129022282,129021091,129014771,129014411,129013008,129012236,129010670,129010120,129009771,129009453,129009106,129008039	129028279,129022423,129021219,129014904,129014503,129013019,129012298,129010693,129010209,129009871,129009467,129009346,129008791	Gene ID= ENSG00000148341.17 TPM= 11.68 Transcript Type= protein_coding
chr9	129036620	129072082	129036620	129072082	+	transcript3599.chr9.nic@MIGA2	transcript3599.chr9.nic	protein_coding	129036620,129040452,129042304,129048427,129049381,129049827,129059154,129060550,129061231,129063244,129063545,129067773,129068198,129069076,129069849,129070247	129036681,129040690,129042514,129048539,129049498,129049963,129059271,129060650,129061346,129063316,129063631,129067871,129068332,129069129,129069965,129072082	Gene ID= ENSG00000148343.18 TPM= 77.54 Transcript Type= NA
chr9	129036620	129072082	129036620	129072082	+	transcript3603.chr9.nic@MIGA2	transcript3603.chr9.nic	protein_coding	129036620,129040452,129042304,129048427,129049381,129049827,129059154,129061231,129063244,129063545,129067773,129068198,129069076,129069849,129070247	129036681,129040690,129042514,129048539,129049498,129049963,129060650,129061346,129063316,129063631,129067871,129068332,129069129,129069965,129072082	Gene ID= ENSG00000148343.18 TPM= 15.93 Transcript Type= NA
chr9	129064508	129066782	129064508	129066782	-	transcript3606.chr9.nnic@NA	transcript3606.chr9.nnic	NA	129064508	129066782	Gene ID= novel_gene_chr9_3607 TPM= 4.25 Transcript Type= NA
chr9	129081100	129090435	129081100	129090435	+	ENST00000372546.8@DOLPP1	ENST00000372546.8	protein_coding	129081100,129084668,129085023,129085207,129085518,129086139,129086709,129088971	129081207,129084768,129085107,129085306,129085616,129086267,129086798,129090435	Gene ID= ENSG00000167130.17 TPM= 7.44 Transcript Type= protein_coding
chr9	129081111	129090435	129081111	129090435	+	ENST00000406974.7@DOLPP1	ENST00000406974.7	protein_coding	129081111,129084668,129085023,129085207,129085518,129086709,129088971	129081207,129084768,129085107,129085306,129085616,129086798,129090435	Gene ID= ENSG00000167130.17 TPM= 5.31 Transcript Type= protein_coding
chr9	129094810	129110804	129094810	129110804	-	ENST00000318080.6@CRAT	ENST00000318080.6	protein_coding	129110483,129107814,129104188,129103013,129102400,129101883,129100511,129099866,129098531,129098249,129098013,129097250,129095998,129094810	129110804,129108077,129104306,129103066,129102565,129102057,129100689,129099966,129098650,129098371,129098148,129097312,129096135,129095612	Gene ID= ENSG00000095321.16 TPM= 79.66 Transcript Type= protein_coding
chr9	129107334	129110711	129107334	129110711	-	ENST00000393384.3@CRAT	ENST00000393384.3	protein_coding	129110483,129107334	129110711,129108077	Gene ID= ENSG00000095321.16 TPM= 3.19 Transcript Type= protein_coding
chr9	129111314	129148945	129111314	129148945	+	ENST00000337738.5@PTPA	ENST00000337738.5	protein_coding	129111314,129120513,129123052,129127964,129128985,129131522,129134795,129136471,129137592,129142445,129147387	129111631,129120610,129123138,129128068,129129110,129131639,129134894,129136595,129137692,129142552,129148945	Gene ID= ENSG00000119383.19 TPM= 47.8 Transcript Type= protein_coding
chr9	129111318	129148946	129111318	129148946	+	ENST00000393370.6@PTPA	ENST00000393370.6	protein_coding	129111318,129120513,129123052,129128985,129131522,129134795,129136471,129137592,129142445,129147387	129111631,129120610,129123138,129129110,129131639,129134894,129136595,129137692,129142552,129148946	Gene ID= ENSG00000119383.19 TPM= 74.35 Transcript Type= protein_coding
chr9	129176670	129178262	129176670	129178262	-	transcript3648.chr9.nnic@NA	transcript3648.chr9.nnic	NA	129176670	129178262	Gene ID= novel_gene_chr9_3649 TPM= 24.43 Transcript Type= NA
chr9	129488630	129506948	129488630	129506948	+	transcript3657.chr9.nnic@LINC00963	transcript3657.chr9.nnic	processed_transcript	129488630,129493419,129503323,129506628	129489299,129493595,129504278,129506948	Gene ID= ENSG00000204054.13 TPM= 3.19 Transcript Type= NA
chr9	129488545	129504274	129488545	129504274	+	ENST00000444184.5@LINC00963	ENST00000444184.5	processed_transcript	129488545,129493416,129503323	129489299,129493595,129504274	Gene ID= ENSG00000204054.13 TPM= 9.56 Transcript Type= lincRNA
chr9	129503859	129505043	129503859	129505043	+	transcript3667.chr9.nnic@NA	transcript3667.chr9.nnic	NA	129503859	129505043	Gene ID= novel_gene_chr9_3668 TPM= 2.12 Transcript Type= NA
chr9	129504679	129506939	129504679	129506939	+	transcript3669.chr9.nnic@NA	transcript3669.chr9.nnic	NA	129504679	129506939	Gene ID= novel_gene_chr9_3670 TPM= 2.12 Transcript Type= NA
chr9	129508674	129510898	129508674	129510898	+	transcript3671.chr9.nnic@NA	transcript3671.chr9.nnic	NA	129508674	129510898	Gene ID= novel_gene_chr9_3672 TPM= 3.19 Transcript Type= NA
chr9	129626153	129636131	129626153	129636131	+	ENST00000611055.4@NTMT1	ENST00000611055.4	protein_coding	129626153,129632650,129634054,129635208	129626321,129632865,129634306,129636131	Gene ID= ENSG00000148335.14 TPM= 1.06 Transcript Type= protein_coding
chr9	129626183	129635600	129626183	129635600	+	transcript3689.chr9.nic@NTMT1	transcript3689.chr9.nic	protein_coding	129626183,129634054,129635208	129626321,129634221,129635600	Gene ID= ENSG00000148335.14 TPM= 9.56 Transcript Type= NA
chr9	129636892	129642487	129636892	129642487	-	transcript3676.chr9.nic@ASB6	transcript3676.chr9.nic	protein_coding	129641887,129640541,129639402,129638573,129636892	129642487,129640722,129639508,129639310,129638457	Gene ID= ENSG00000148331.11 TPM= 4.78 Transcript Type= NA
chr9	129636892	129642165	129636892	129642165	-	ENST00000277458.4@ASB6	ENST00000277458.4	protein_coding	129641887,129640541,129639402,129639202,129638573,129636892	129642165,129640722,129639508,129639310,129638659,129638457	Gene ID= ENSG00000148331.11 TPM= 18.59 Transcript Type= protein_coding
chr9	129665641	129722674	129665641	129722674	+	ENST00000372469.5@PRRX2	ENST00000372469.5	protein_coding	129665641,129719231,129720596,129722217	129666126,129719418,129720774,129722674	Gene ID= ENSG00000167157.10 TPM= 5.31 Transcript Type= protein_coding
chr9	129738331	129753047	129738331	129753047	-	ENST00000340607.4@PTGES	ENST00000340607.4	protein_coding	129752887,129748655,129738331	129753047,129748737,129739860	Gene ID= ENSG00000148344.10 TPM= 3.19 Transcript Type= protein_coding
chr9	129803140	129811281	129803140	129811281	+	transcript3697.chr9.nnic@TOR1B	transcript3697.chr9.nnic	protein_coding	129803140,129804073,129807188,129808905,129809342	129803411,129804213,129807363,129809032,129811281	Gene ID= ENSG00000136816.15 TPM= 2.12 Transcript Type= NA
chr9	129803153	129811281	129803153	129811281	+	ENST00000259339.6@TOR1B	ENST00000259339.6	protein_coding	129803153,129804073,129807188,129808905,129809342	129803411,129804338,129807363,129809032,129811281	Gene ID= ENSG00000136816.15 TPM= 9.56 Transcript Type= protein_coding
chr9	129812944	129824134	129812944	129824134	-	ENST00000351698.4@TOR1A	ENST00000351698.4	protein_coding	129823908,129822581,129818745,129818520,129812944	129824134,129822846,129818920,129818647,129814222	Gene ID= ENSG00000136827.11 TPM= 20.18 Transcript Type= protein_coding
chr9	129827290	129835275	129827290	129835275	-	ENST00000372447.7@C9orf78	ENST00000372447.7	protein_coding	129835139,129834707,129833658,129833447,129831896,129830871,129829405,129829205,129827290	129835275,129834766,129833709,129833517,129831973,129831068,129829541,129829303,129828252	Gene ID= ENSG00000136819.15 TPM= 63.73 Transcript Type= protein_coding
chr9	129835446	129881838	129835446	129881838	+	ENST00000372429.7@USP20	ENST00000372429.7	protein_coding	129835446,129849813,129852540,129856307,129858050,129858467,129860937,129861543,129863186,129865303,129868005,129868862,129869310,129869672,129870453,129873482,129873699,129874576,129874829,129875310,129875560,129876130,129878338,129879573,129880113,129880467	129835499,129849924,129852636,129856360,129858112,129858598,129861033,129861612,129863299,129865381,129868449,129869002,129869425,129869844,129870547,129873515,129873744,129874756,129874955,129875479,129875641,129876238,129878440,129879644,129880289,129881838	Gene ID= ENSG00000136878.12 TPM= 25.49 Transcript Type= protein_coding
chr9	129873082	129876463	129873082	129876463	-	transcript3717.chr9.nnic@NA	transcript3717.chr9.nnic	NA	129873082	129876463	Gene ID= novel_gene_chr9_3718 TPM= 3.19 Transcript Type= NA
chr9	129895812	130043227	129895812	130043227	-	transcript3720.chr9.nic@FNBP1	transcript3720.chr9.nic	protein_coding	130042952,129994843,129979318,129978465,129958491,129957360,129929567,129927195,129924960,129923844,129915966,129908890,129902869,129900426,129899965,129895812	130043227,129994958,129979374,129978612,129958553,129957464,129929695,129927341,129925157,129923996,129915980,129908999,129903001,129900547,129900101,129895996	Gene ID= ENSG00000187239.16 TPM= 5.84 Transcript Type= NA
chr9	129895812	130043167	129895812	130043167	-	ENST00000355681.3@FNBP1	ENST00000355681.3	protein_coding	130042952,129994843,129979318,129978465,129958491,129957360,129929567,129927195,129924960,129923844,129915966,129908890,129902869,129900426,129899965,129895812	130043167,129994958,129979374,129978612,129958553,129957464,129929695,129927341,129925157,129923939,129915980,129908999,129903001,129900547,129900101,129895996	Gene ID= ENSG00000187239.16 TPM= 1.06 Transcript Type= protein_coding
chr9	129891883	129892906	129891883	129892906	-	transcript3729.chr9.nnic@NA	transcript3729.chr9.nnic	NA	129891883	129892906	Gene ID= novel_gene_chr9_3730 TPM= 3.19 Transcript Type= NA
chr9	130002329	130003932	130002329	130003932	+	transcript3727.chr9.nnic@NA	transcript3727.chr9.nnic	NA	130002329	130003932	Gene ID= novel_gene_chr9_3728 TPM= 2.12 Transcript Type= NA
chr9	130135239	130138012	130135239	130138012	+	transcript3731.chr9.nnic@NA	transcript3731.chr9.nnic	NA	130135239	130138012	Gene ID= novel_gene_chr9_3732 TPM= 2.12 Transcript Type= NA
chr9	130444929	130501274	130444929	130501274	+	ENST00000352480.9@ASS1	ENST00000352480.9	protein_coding	130444929,130452224,130454305,130458401,130464111,130466725,130470834,130471485,130476871,130479716,130480385,130489333,130494867,130499505,130500976	130444995,130452333,130454373,130458589,130464167,130466799,130470904,130471515,130476961,130479800,130480449,130489464,130495023,130499570,130501274	Gene ID= ENSG00000130707.17 TPM= 67.45 Transcript Type= protein_coding
chr9	130444988	130501255	130444988	130501255	+	ENST00000372393.7@ASS1	ENST00000372393.7	protein_coding	130444988,130450272,130452224,130454305,130458401,130464111,130466725,130470834,130471485,130476871,130479716,130480385,130489333,130494867,130499505,130500976	130444995,130450333,130452333,130454373,130458589,130464167,130466799,130470904,130471515,130476961,130479800,130480449,130489464,130495023,130499570,130501255	Gene ID= ENSG00000130707.17 TPM= 16.46 Transcript Type= protein_coding
chr9	130579576	130638352	130579576	130638352	+	transcript3750.chr9.nnic@FUBP3	transcript3750.chr9.nnic	protein_coding	130579576,130595483,130609954,130612456,130612956,130614288,130616355,130617797,130620354,130622708,130623611,130626364,130630628,130631557,130631942,130632202,130635999,130637014	130579764,130595588,130609987,130612505,130613027,130614345,130616517,130617895,130620458,130622810,130623711,130626505,130630788,130631630,130632022,130632278,130636126,130638352	Gene ID= ENSG00000107164.15 TPM= 25.49 Transcript Type= NA
chr9	130579585	130638352	130579585	130638352	+	transcript3752.chr9.nnic@FUBP3	transcript3752.chr9.nnic	protein_coding	130579585,130609954,130612456,130612956,130614288,130616355,130617797,130620354,130622708,130623611,130626364,130630628,130631557,130631942,130632202,130634667,130635999,130637014	130579764,130609987,130612505,130613027,130614345,130616517,130617895,130620458,130622810,130623711,130626505,130630788,130631630,130632022,130632278,130634738,130636126,130638352	Gene ID= ENSG00000107164.15 TPM= 4.25 Transcript Type= NA
chr9	130579606	130638352	130579606	130638352	+	ENST00000319725.9@FUBP3	ENST00000319725.9	protein_coding	130579606,130595483,130609954,130612456,130612956,130614288,130616355,130617797,130620354,130622708,130623611,130626364,130630628,130631557,130631942,130632202,130634667,130635999,130637014	130579764,130595588,130609987,130612505,130613027,130614345,130616517,130617895,130620458,130622810,130623711,130626505,130630788,130631630,130632022,130632278,130634738,130636126,130638352	Gene ID= ENSG00000107164.15 TPM= 56.29 Transcript Type= protein_coding
chr9	130603327	130604913	130603327	130604913	+	transcript3759.chr9.nnic@NA	transcript3759.chr9.nnic	NA	130603327	130604913	Gene ID= novel_gene_chr9_3760 TPM= 2.12 Transcript Type= NA
chr9	130693721	130704861	130693721	130704861	+	ENST00000372358.9@EXOSC2	ENST00000372358.9	protein_coding	130693721,130695492,130697582,130698162,130699329,130700867,130702134,130703053,130703694	130693913,130695593,130697627,130698251,130699394,130700935,130702310,130703181,130704861	Gene ID= ENSG00000130713.15 TPM= 1.06 Transcript Type= protein_coding
chr9	130706609	130706962	130706609	130706962	-	transcript3766.chr9.nnic@NA	transcript3766.chr9.nnic	NA	130706609	130706962	Gene ID= novel_gene_chr9_3767 TPM= 4.25 Transcript Type= NA
chr9	130835066	130887675	130835066	130887675	+	ENST00000318560.5@ABL1	ENST00000318560.5	protein_coding	130835066,130854064,130854801,130862763,130872129,130872860,130874868,130878415,130880068,130880500,130883969	130835525,130854237,130855096,130863035,130872213,130873037,130875052,130878567,130880157,130880664,130887675	Gene ID= ENSG00000097007.17 TPM= 45.67 Transcript Type= protein_coding
chr9	131096542	131123145	131096542	131123145	+	ENST00000247291.7@AIF1L	ENST00000247291.7	protein_coding	131096542,131096802,131111597,131114577,131117756,131120235	131096660,131096863,131111663,131114618,131117918,131123145	Gene ID= ENSG00000126878.12 TPM= 9.56 Transcript Type= protein_coding
chr9	131228518	131233008	131228518	131233008	+	ENST00000496921.2@NUP214	ENST00000496921.2	protein_coding	131228518,131232284	131230769,131233008	Gene ID= ENSG00000126883.16 TPM= 1.06 Transcript Type= retained_intron
chr9	131260082	131277987	131260082	131277987	-	transcript3781.chr9.nnic@FAM78A	transcript3781.chr9.nnic	protein_coding	131277340,131275857,131260082	131277987,131276943,131261350	Gene ID= ENSG00000126882.12 TPM= 5.31 Transcript Type= NA
chr9	131260082	131278101	131260082	131278101	-	transcript3782.chr9.nnic@FAM78A	transcript3782.chr9.nnic	protein_coding	131277548,131275857,131260082	131278101,131276943,131261350	Gene ID= ENSG00000126882.12 TPM= 5.84 Transcript Type= NA
chr9	131258076	131276547	131258076	131276547	-	ENST00000372271.3@FAM78A	ENST00000372271.3	protein_coding	131275857,131258076	131276547,131261350	Gene ID= ENSG00000126882.12 TPM= 28.68 Transcript Type= protein_coding
chr9	131289694	131309262	131289694	131309262	+	ENST00000372264.3@PLPP7	ENST00000372264.3	protein_coding	131289694,131307923	131290448,131309262	Gene ID= ENSG00000160539.4 TPM= 182.69 Transcript Type= protein_coding
chr9	131289812	131291445	131289812	131291445	+	ENST00000372261.1@PLPP7	ENST00000372261.1	protein_coding	131289812,131291111	131290448,131291445	Gene ID= ENSG00000160539.4 TPM= 3.19 Transcript Type= protein_coding
chr9	131291559	131293676	131291559	131293676	-	transcript3798.chr9.nnic@NA	transcript3798.chr9.nnic	NA	131291559	131293676	Gene ID= novel_gene_chr9_3799 TPM= 8.5 Transcript Type= NA
chr9	131302762	131304639	131302762	131304639	+	transcript3792.chr9.nnic@NA	transcript3792.chr9.nnic	NA	131302762	131304639	Gene ID= novel_gene_chr9_3793 TPM= 3.19 Transcript Type= NA
chr9	131308989	131311501	131308989	131311501	+	transcript3796.chr9.nnic@NA	transcript3796.chr9.nnic	NA	131308989	131311501	Gene ID= novel_gene_chr9_3797 TPM= 2.12 Transcript Type= NA
chr9	131394093	131500197	131394093	131500197	+	ENST00000405995.5@PRRC2B	ENST00000405995.5	protein_coding	131394093,131430090,131432617,131436620,131438989,131444185,131446401,131447085,131447662,131455076,131459164,131464763,131467563,131470788,131473508,131477744,131478474,131479252,131481726,131482371,131482710,131483359,131484686,131484948,131486085,131487167,131487856,131491425,131492169,131494405,131495740	131394263,131430259,131432794,131436722,131439061,131444328,131446642,131447206,131447804,131455166,131459356,131465078,131467753,131470983,131473724,131477949,131478619,131479393,131481808,131482562,131482907,131483445,131484790,131485140,131486182,131487294,131488096,131491580,131492260,131494486,131500197	Gene ID= ENSG00000130723.18 TPM= 48.86 Transcript Type= protein_coding
chr9	131414575	131417473	131414575	131417473	-	transcript3806.chr9.nnic@NA	transcript3806.chr9.nnic	NA	131414575	131417473	Gene ID= novel_gene_chr9_3807 TPM= 3.19 Transcript Type= NA
chr9	131430954	131434597	131430954	131434597	-	transcript3812.chr9.nnic@NA	transcript3812.chr9.nnic	NA	131430954	131434597	Gene ID= novel_gene_chr9_3813 TPM= 3.19 Transcript Type= NA
chr9	131488271	131490222	131488271	131490222	-	transcript3808.chr9.nnic@NA	transcript3808.chr9.nnic	NA	131488271	131490222	Gene ID= novel_gene_chr9_3809 TPM= 3.19 Transcript Type= NA
chr9	131502918	131523806	131502918	131523806	+	ENST00000341012.11@POMT1	ENST00000341012.11	protein_coding	131502918,131506114,131506403,131507368,131508911,131509743,131509903,131510260,131511337,131512041,131513239,131515426,131518445,131518837,131519389,131520080,131521346,131522047,131522932	131503073,131506220,131506453,131507514,131509022,131509808,131509996,131510415,131511467,131512136,131513331,131515522,131518537,131518957,131519486,131520193,131521472,131522224,131523806	Gene ID= ENSG00000130714.15 TPM= 11.07 Transcript Type= protein_coding
chr9	131502937	131523798	131502937	131523798	+	transcript3818.chr9.nic@POMT1	transcript3818.chr9.nic	protein_coding	131502937,131504189,131506114,131506403,131507368,131508911,131509743,131509903,131511337,131512041,131513239,131515426,131518445,131518837,131519389,131520080,131521346,131522047,131522932	131503073,131504340,131506220,131506453,131507514,131509022,131509808,131510415,131511467,131512136,131513331,131515522,131518537,131518957,131519486,131520193,131521472,131522224,131523798	Gene ID= ENSG00000130714.15 TPM= 6.11 Transcript Type= NA
chr9	131502902	131523806	131502902	131523806	+	ENST00000404875.6@POMT1	ENST00000404875.6	protein_coding	131502902,131506403,131507368,131508911,131509743,131509903,131510260,131511337,131512041,131513239,131515426,131518445,131518837,131519389,131520080,131521346,131522047,131522932	131503073,131506453,131507514,131509022,131509808,131509996,131510415,131511467,131512136,131513331,131515522,131518537,131518957,131519486,131520193,131521472,131522224,131523806	Gene ID= ENSG00000130714.15 TPM= 7.88 Transcript Type= protein_coding
chr9	131502944	131523806	131502944	131523806	+	ENST00000402686.7@POMT1	ENST00000402686.7	protein_coding	131502944,131504189,131506114,131506403,131507368,131508911,131509743,131509903,131510260,131511337,131512041,131513239,131515426,131518445,131518837,131519389,131520080,131521346,131522047,131522932	131503073,131504340,131506220,131506453,131507514,131509022,131509808,131509996,131510415,131511467,131512136,131513331,131515522,131518537,131518957,131519486,131520193,131521472,131522224,131523806	Gene ID= ENSG00000130714.15 TPM= 13.19 Transcript Type= protein_coding
chr9	131523801	131531259	131523801	131531259	-	transcript3825.chr9.nnic@UCK1	transcript3825.chr9.nnic	protein_coding	131531067,131530486,131529488,131529128,131528944,131526445,131525929,131523801	131531259,131530645,131529584,131529270,131529038,131526506,131525977,131525221	Gene ID= ENSG00000130717.12 TPM= 6.02 Transcript Type= NA
chr9	131523801	131531268	131523801	131531268	-	ENST00000372215.4@UCK1	ENST00000372215.4	protein_coding	131531067,131530486,131529488,131529128,131528944,131525929,131523801	131531268,131530645,131529584,131529270,131529038,131525977,131525221	Gene ID= ENSG00000130717.12 TPM= 70.81 Transcript Type= protein_coding
chr9	131523801	131531200	131523801	131531200	-	ENST00000372211.7@UCK1	ENST00000372211.7	protein_coding	131531094,131530486,131529488,131529128,131528944,131525929,131523801	131531200,131530687,131529584,131529270,131529038,131525977,131525221	Gene ID= ENSG00000130717.12 TPM= 6.02 Transcript Type= protein_coding
chr9	131576778	131740111	131576778	131740111	-	transcript3841.chr9.nic@RAPGEF1	transcript3841.chr9.nic	protein_coding	131739770,131650810,131643239,131638635,131630236,131629102,131628549,131627913,131625922,131621796,131619051,131604931,131602061,131598199,131596298,131592099,131589886,131588801,131587942,131587736,131584518,131584311,131582605,131580263,131576778	131740111,131650949,131643417,131638791,131630324,131629254,131628672,131628096,131626422,131621998,131619209,131605188,131602149,131598310,131596373,131592183,131589978,131588986,131588026,131587830,131584596,131584412,131582702,131580391,131579647	Gene ID= ENSG00000107263.18 TPM= 147.64 Transcript Type= NA
chr9	131649201	131740111	131649201	131740111	-	transcript3849.chr9.nic@RAPGEF1	transcript3849.chr9.nic	protein_coding	131739770,131649201	131740111,131650949	Gene ID= ENSG00000107263.18 TPM= 6.37 Transcript Type= NA
chr9	131860107	132079908	131860107	132079908	-	ENST00000292035.9@MED27	ENST00000292035.9	protein_coding	132079642,132077442,132014337,131939381,131893885,131884058,131863063,131860107	132079908,132077586,132014467,131939474,131893992,131884099,131863140,131860672	Gene ID= ENSG00000160563.13 TPM= 28.68 Transcript Type= protein_coding
chr9	131865281	131868232	131865281	131868232	-	transcript3853.chr9.nnic@NA	transcript3853.chr9.nnic	NA	131865281	131868232	Gene ID= novel_gene_chr9_3854 TPM= 2.12 Transcript Type= NA
chr9	132326325	132354996	132326325	132354996	-	transcript3861.chr9.nic@SETX	transcript3861.chr9.nic	protein_coding	132354917,132353649,132349252,132346261,132342690,132336296,132334608,132331277,132331052,132326325	132354996,132353755,132349435,132346471,132342799,132336515,132334727,132331448,132331139,132330499	Gene ID= ENSG00000107290.13 TPM= 6.37 Transcript Type= NA
chr9	132375548	132406851	132375548	132406851	-	ENST00000612514.4@TTF1	ENST00000612514.4	protein_coding	132406790,132400035,132398141,132396433,132392076,132390597,132388139,132386556,132379059,132375548	132406851,132400258,132398326,132396511,132392206,132390831,132388228,132386621,132379144,132376168	Gene ID= ENSG00000125482.12 TPM= 1.06 Transcript Type= protein_coding
chr9	132402001	132406841	132402001	132406841	-	transcript3868.chr9.nic@TTF1	transcript3868.chr9.nic	protein_coding	132406790,132402001	132406841,132402828	Gene ID= ENSG00000125482.12 TPM= 6.37 Transcript Type= NA
chr9	132402169	132406841	132402169	132406841	-	transcript3869.chr9.nic@TTF1	transcript3869.chr9.nic	protein_coding	132406790,132402169	132406841,132402828	Gene ID= ENSG00000125482.12 TPM= 3.19 Transcript Type= NA
chr9	132375621	132406822	132375621	132406822	-	ENST00000334270.2@TTF1	ENST00000334270.2	protein_coding	132406790,132401455,132400035,132398141,132396433,132392076,132390597,132388139,132386556,132379059,132375621	132406822,132402828,132400258,132398326,132396511,132392206,132390831,132388228,132386621,132379144,132376168	Gene ID= ENSG00000125482.12 TPM= 6.37 Transcript Type= protein_coding
chr9	132410030	132545471	132410030	132545471	+	transcript3871.chr9.nnic@CFAP77	transcript3871.chr9.nnic	protein_coding	132410030,132498695,132499372,132537601,132542946,132544681	132410466,132498794,132499600,132537706,132543047,132545471	Gene ID= ENSG00000188523.8 TPM= 2.12 Transcript Type= NA
chr9	132579547	132581730	132579547	132581730	+	transcript3873.chr9.nnic@NA	transcript3873.chr9.nnic	NA	132579547	132581730	Gene ID= novel_gene_chr9_3874 TPM= 3.19 Transcript Type= NA
chr9	132594289	132670000	132594289	132670000	-	transcript3878.chr9.nnic@DDX31	transcript3878.chr9.nnic	protein_coding	132669860,132662439,132662261,132661208,132659710,132658671,132652448,132651075,132650234,132648432,132648189,132646823,132645895,132642004,132632041,132630264,132618330,132612087,132594289	132670000,132662695,132662336,132661251,132659780,132658735,132652492,132651116,132650298,132648551,132648295,132647058,132646071,132642063,132632091,132630378,132618441,132612255,132595112	Gene ID= ENSG00000125485.17 TPM= 2.12 Transcript Type= NA
chr9	132594386	132670027	132594386	132670027	-	ENST00000438527.7@DDX31	ENST00000438527.7	protein_coding	132669860,132662439,132662261,132661208,132659710,132658671,132652448,132651075,132650234,132648432,132648189,132646823,132645895,132642004,132632041,132630264,132625664,132618330,132612087,132594386	132670027,132662695,132662336,132661251,132659780,132658735,132652492,132651116,132650298,132648551,132648295,132647058,132646071,132642063,132632091,132630403,132625745,132618441,132612255,132595112	Gene ID= ENSG00000125485.17 TPM= 1.06 Transcript Type= protein_coding
chr9	132670035	132694955	132670035	132694955	+	ENST00000372146.4@GTF3C4	ENST00000372146.4	protein_coding	132670035,132677977,132683563,132687239,132688881	132670955,132679803,132683693,132687327,132694955	Gene ID= ENSG00000125484.11 TPM= 6.37 Transcript Type= protein_coding
chr9	132878323	132890030	132878323	132890030	+	transcript3883.chr9.nic@SPACA9	transcript3883.chr9.nic	protein_coding	132878323,132883911,132887369,132888290,132889957	132878436,132884091,132887571,132888437,132890030	Gene ID= ENSG00000165698.15 TPM= 4.25 Transcript Type= NA
chr9	132891348	132944621	132891348	132944621	-	ENST00000298552.7@TSC1	ENST00000298552.7	protein_coding	132944543,132935033,132928767,132927201,132925587,132923348,132921819,132921363,132912282,132911453,132911002,132910571,132907301,132906731,132905581,132904411,132903651,132902605,132901589,132900715,132897423,132897184,132891348	132944621,132935095,132928952,132927304,132925739,132923492,132921973,132921436,132912457,132911568,132911113,132910692,132907370,132906835,132906139,132904454,132903817,132902787,132901699,132900837,132897610,132897345,132896754	Gene ID= ENSG00000165699.13 TPM= 60.54 Transcript Type= protein_coding
chr9	133030689	133058503	133030689	133058503	+	ENST00000372097.9@GTF3C5	ENST00000372097.9	protein_coding	133030689,133042087,133043728,133050783,133052060,133053828,133054408,133054712,133056012,133056766,133057814	133031164,133042306,133043926,133050978,133052164,133053942,133054488,133054809,133056094,133056908,133058503	Gene ID= ENSG00000148308.17 TPM= 39.3 Transcript Type= protein_coding
chr9	133097723	133149433	133097723	133149433	-	transcript3890.chr9.nic@RALGDS	transcript3890.chr9.nic	protein_coding	133148963,133112042,133110296,133109626,133108673,133107988,133107085,133106645,133105932,133104263,133103747,133103230,133102779,133102476,133101938,133101520,133100268,133097723	133149433,133112152,133110489,133109685,133108866,133108406,133107300,133106748,133106016,133104331,133103833,133103262,133102900,133102571,133102139,133101762,133100382,133098762	Gene ID= ENSG00000160271.14 TPM= 21.77 Transcript Type= NA
chr9	133152953	133163945	133152953	133163945	-	ENST00000372040.7@GBGT1	ENST00000372040.7	protein_coding	133163754,133162342,133161467,133156015,133155901,133155178,133152953	133163945,133162532,133161532,133156065,133155936,133155312,133154261	Gene ID= ENSG00000148288.11 TPM= 1.06 Transcript Type= protein_coding
chr9	133328774	133336398	133328774	133336398	-	ENST00000372022.5@SURF6	ENST00000372022.5	protein_coding	133336039,133334392,133333718,133332548,133328774	133336398,133334601,133333806,133332760,133332348	Gene ID= ENSG00000148296.6 TPM= 10.62 Transcript Type= protein_coding
chr9	133340905	133348117	133340905	133348117	-	ENST00000343730.9@MED22	ENST00000343730.9	protein_coding	133347922,133346540,133345172,133344125,133340905	133348117,133346700,133345252,133344333,133341694	Gene ID= ENSG00000148297.15 TPM= 52.05 Transcript Type= protein_coding
chr9	133340905	133348117	133340905	133348117	-	ENST00000610888.4@MED22	ENST00000610888.4	protein_coding	133347922,133346540,133345172,133340905	133348117,133346700,133345252,133344333	Gene ID= ENSG00000148297.15 TPM= 21.24 Transcript Type= protein_coding
chr9	133348214	133351426	133348214	133351426	+	ENST00000323345.10@RPL7A	ENST00000323345.10	protein_coding	133348214,133348922,133349551,133349912,133350240,133350597,133351002,133351262	133348246,133349042,133349700,133350052,133350319,133350727,133351071,133351426	Gene ID= ENSG00000148303.16 TPM= 215.62 Transcript Type= protein_coding
chr9	133351755	133356485	133351755	133356485	-	ENST00000371974.7@SURF1	ENST00000371974.7	protein_coding	133356400,133356269,133354824,133354659,133353749,133352694,133352446,133352061,133351755	133356485,133356320,133354957,133354741,133353940,133352766,133352608,133352142,133351982	Gene ID= ENSG00000148290.9 TPM= 92.41 Transcript Type= protein_coding
chr9	133351805	133356485	133351805	133356485	-	ENST00000615505.4@SURF1	ENST00000615505.4	protein_coding	133356400,133354824,133354659,133353749,133352694,133352446,133352061,133351805	133356485,133354957,133354741,133353940,133352766,133352608,133352142,133351982	Gene ID= ENSG00000148290.9 TPM= 49.92 Transcript Type= protein_coding
chr9	133356105	133356676	133356105	133356676	-	ENST00000463965.1@SURF1	ENST00000463965.1	protein_coding	133356400,133356105	133356676,133356320	Gene ID= ENSG00000148290.9 TPM= 2.12 Transcript Type= processed_transcript
chr9	133356554	133361169	133356554	133361169	+	transcript3926.chr9.nnic@SURF2	transcript3926.chr9.nnic	protein_coding	133356554,133356914,133357220,133357711,133359950,133360265,133361056	133356670,133357056,133357234,133357814,133360129,133360434,133361169	Gene ID= ENSG00000148291.9 TPM= 2.66 Transcript Type= NA
chr9	133356552	133361169	133356552	133361169	+	ENST00000371964.4@SURF2	ENST00000371964.4	protein_coding	133356552,133356914,133357711,133359950,133360265,133361056	133356670,133357068,133357814,133360129,133360434,133361169	Gene ID= ENSG00000148291.9 TPM= 6.9 Transcript Type= protein_coding
chr9	133356554	133361169	133356554	133361169	+	transcript3928.chr9.nic@SURF2	transcript3928.chr9.nic	protein_coding	133356554,133356914,133357711,133359950,133360265,133361056	133356670,133357182,133357814,133360129,133360434,133361169	Gene ID= ENSG00000148291.9 TPM= 9.03 Transcript Type= NA
chr9	133356554	133361169	133356554	133361169	+	transcript3930.chr9.nic@SURF2	transcript3930.chr9.nic	protein_coding	133356554,133356914,133357711,133359950,133360265,133361056	133356670,133357234,133357814,133360129,133360434,133361169	Gene ID= ENSG00000148291.9 TPM= 3.72 Transcript Type= NA
chr9	133361450	133376166	133361450	133376166	-	ENST00000545297.5@SURF4	ENST00000545297.5	protein_coding	133375922,133367259,133366599,133365985,133361450	133376166,133367445,133366675,133366028,133363759	Gene ID= ENSG00000148248.13 TPM= 21.77 Transcript Type= protein_coding
chr9	133361449	133376099	133361449	133376099	-	ENST00000371989.7@SURF4	ENST00000371989.7	protein_coding	133375922,133367259,133366599,133365985,133364840,133361449	133376099,133367445,133366675,133366028,133365026,133363759	Gene ID= ENSG00000148248.13 TPM= 190.66 Transcript Type= protein_coding
chr9	133406062	133418044	133406062	133418044	-	ENST00000371942.7@REXO4	ENST00000371942.7	protein_coding	133417620,133414665,133412778,133412299,133410985,133408768,133407807,133406062	133418044,133415011,133412921,133412492,133411073,133408842,133407881,133407072	Gene ID= ENSG00000148300.11 TPM= 27.62 Transcript Type= protein_coding
chr9	133459997	133470763	133459997	133470763	+	transcript3956.chr9.nnic@CACFD1	transcript3956.chr9.nnic	protein_coding	133459997,133463407,133465322,133467921,133468563	133460187,133463555,133465447,133468028,133470763	Gene ID= ENSG00000160325.14 TPM= 4.25 Transcript Type= NA
chr9	133459967	133470848	133459967	133470848	+	ENST00000291722.11@CACFD1	ENST00000291722.11	protein_coding	133459967,133463483,133467921,133468563	133460187,133463555,133468028,133470848	Gene ID= ENSG00000160325.14 TPM= 7.44 Transcript Type= protein_coding
chr9	133460576	133470763	133460576	133470763	+	transcript3960.chr9.nic@CACFD1	transcript3960.chr9.nic	protein_coding	133460576,133465322,133467921,133468563	133463555,133465447,133468028,133470763	Gene ID= ENSG00000160325.14 TPM= 8.5 Transcript Type= NA
chr9	133463280	133470763	133463280	133470763	+	transcript3961.chr9.nic@CACFD1	transcript3961.chr9.nic	protein_coding	133463280,133467921,133468563	133463555,133468028,133470763	Gene ID= ENSG00000160325.14 TPM= 2.12 Transcript Type= NA
chr9	133471095	133479137	133471095	133479137	-	ENST00000371899.8@SLC2A6	ENST00000371899.8	protein_coding	133478968,133478254,133477035,133476237,133475400,133474961,133473980,133473415,133473105,133471095	133479137,133478416,133477241,133476336,133475611,133475113,133474088,133473600,133473250,133472176	Gene ID= ENSG00000160326.13 TPM= 5.84 Transcript Type= protein_coding
chr9	133471095	133479096	133471095	133479096	-	ENST00000371897.8@SLC2A6	ENST00000371897.8	protein_coding	133478968,133478254,133477035,133476237,133475400,133474961,133473980,133473105,133471095	133479096,133478416,133477241,133476336,133475611,133475113,133474088,133473250,133472176	Gene ID= ENSG00000160326.13 TPM= 4.78 Transcript Type= protein_coding
chr9	133534309	133575519	133534309	133575519	+	ENST00000393061.7@ADAMTSL2	ENST00000393061.7	protein_coding	133534309,133536563,133537405,133538349,133539771,133540598,133540878,133544470,133547038,133554357,133555558,133561198,133566936,133568273,133568603,133569408,133570331,133573843,133574746	133534917,133536802,133537547,133538424,133539873,133540743,133541001,133544550,133547213,133554693,133555930,133561295,133567062,133568486,133568758,133569578,133570507,133573987,133575519	Gene ID= ENSG00000197859.9 TPM= 19.12 Transcript Type= protein_coding
chr9	133663560	133739920	133663560	133739920	-	ENST00000371872.8@SARDH	ENST00000371872.8	protein_coding	133739693,133733843,133732423,133731305,133730064,133729765,133718938,133717326,133713038,133712619,133708287,133704948,133702916,133696223,133694258,133690380,133685193,133671535,133670584,133666735,133663560	133739920,133734203,133732601,133731484,133730187,133729865,133719042,133717455,133713124,133712709,133708428,133705031,133703029,133696361,133694371,133690527,133685286,133671697,133670752,133666870,133664014	Gene ID= ENSG00000123453.17 TPM= 2.12 Transcript Type= protein_coding
chr9	133761894	133992825	133761894	133992825	-	transcript3966.chr9.nnic@VAV2	transcript3966.chr9.nnic	protein_coding	133992075,133861374,133834272,133812114,133809040,133807258,133806081,133797710,133796429,133795668,133791783,133789258,133788354,133785776,133784317,133783503,133780694,133779918,133778762,133777389,133776028,133774935,133771959,133770378,133769417,133768442,133761894	133992825,133861432,133834340,133812216,133809138,133807326,133806181,133797809,133796524,133795736,133791869,133789343,133788486,133785885,133784418,133783591,133780710,133779939,133778889,133777463,133776080,133775051,133772046,133770501,133769503,133768596,133764109	Gene ID= ENSG00000160293.16 TPM= 11.68 Transcript Type= NA
chr9	133992951	133994957	133992951	133994957	+	transcript3971.chr9.nnic@NA	transcript3971.chr9.nnic	NA	133992951	133994957	Gene ID= novel_gene_chr9_3972 TPM= 2.12 Transcript Type= NA
chr9	134028771	134030459	134028771	134030459	+	ENST00000599836.1@LINC00094	ENST00000599836.1	protein_coding	134028771	134030459	Gene ID= ENSG00000235106.9 TPM= 1.06 Transcript Type= protein_coding
chr9	134025495	134028102	134025495	134028102	+	ENST00000432807.1@LINC00094	ENST00000432807.1	protein_coding	134025495,134025845	134025536,134028102	Gene ID= ENSG00000235106.9 TPM= 4.25 Transcript Type= protein_coding
chr9	134040199	134068056	134040199	134068056	-	transcript3976.chr9.nic@BRD3	transcript3976.chr9.nic	protein_coding	134067945,134053265,134052306,134051562,134050374,134048083,134045293,134041760,134040199	134068056,134053590,134052443,134051709,134050588,134048454,134045421,134041951,134040269	Gene ID= ENSG00000169925.16 TPM= 8.5 Transcript Type= NA
chr9	134030305	134068017	134030305	134068017	-	ENST00000303407.11@BRD3	ENST00000303407.11	protein_coding	134067945,134053265,134052306,134051562,134050374,134048083,134045293,134041760,134040034,134036032,134034701,134030305	134068017,134053590,134052443,134051709,134050588,134048454,134045421,134041951,134040269,134036324,134034829,134033705	Gene ID= ENSG00000169925.16 TPM= 32.93 Transcript Type= protein_coding
chr9	134136088	134159968	134136088	134159968	+	ENST00000358625.3@WDR5	ENST00000358625.3	protein_coding	134136088,134139820,134140703,134141510,134141949,134142333,134142636,134148288,134151983,134154466,134155340,134155693,134156506,134157893	134136200,134139958,134140811,134141583,134142038,134142422,134142719,134148343,134152029,134154541,134155373,134155767,134156593,134159968	Gene ID= ENSG00000196363.9 TPM= 12.75 Transcript Type= protein_coding
chr9	134641774	134844843	134641774	134844843	+	ENST00000371817.7@COL5A1	ENST00000371817.7	protein_coding	134641774,134690912,134699909,134701171,134727266,134728670,134730236,134731496,134732071,134738474,134738746,134750542,134750790,134752589,134753850,134754273,134756765,134758243,134761925,134763693,134765681,134766454,134767000,134767310,134768410,134772790,134774859,134780102,134782667,134784989,134785995,134789155,134795082,134795262,134796374,134796848,134798408,134801954,134802888,134804975,134805161,134806189,134809183,134810255,134811339,134811492,134812449,134812605,134813983,134814797,134815576,134815935,134817026,134817778,134818656,134818848,134819000,134820116,134822097,134822998,134823416,134824600,134825792,134829976,134834971,134842157	134642296,134691079,134700122,134701333,134727397,134728807,134730475,134731663,134732127,134738515,134738808,134750616,134750882,134752645,134753903,134754326,134756818,134758296,134761978,134763737,134765734,134766498,134767053,134767354,134768463,134772834,134774912,134780146,134782720,134785096,134786048,134789208,134795126,134795315,134796418,134796901,134798461,134802007,134802995,134805064,134805214,134806296,134809290,134810308,134811392,134811599,134812502,134812712,134814036,134814904,134815629,134815988,134817079,134817831,134818763,134818901,134819053,134820223,134822150,134823033,134823469,134824855,134825904,134830044,134835204,134844843	Gene ID= ENSG00000130635.15 TPM= 6.37 Transcript Type= protein_coding
chr9	134909585	134917963	134909585	134917963	-	ENST00000371806.3@FCN1	ENST00000371806.3	protein_coding	134917769,134916348,134914756,134914385,134913581,134913016,134912486,134911133,134909585	134917963,134916461,134914809,134914420,134913613,134913143,134912615,134911267,134910045	Gene ID= ENSG00000085265.10 TPM= 8.5 Transcript Type= protein_coding
chr9	135075422	135098107	135075422	135098107	+	ENST00000277415.15@OLFM1	ENST00000277415.15	protein_coding	135075422,135090195,135095864,135097781	135075802,135090344,135096019,135098107	Gene ID= ENSG00000130558.19 TPM= 2.12 Transcript Type= protein_coding
chr9	135075520	135121178	135075520	135121178	+	ENST00000252854.8@OLFM1	ENST00000252854.8	protein_coding	135075520,135090195,135095864,135098286,135106749,135119504	135075802,135090344,135096019,135098505,135106855,135121178	Gene ID= ENSG00000130558.19 TPM= 3.19 Transcript Type= protein_coding
chr9	135087674	135098065	135087674	135098065	+	ENST00000392991.8@OLFM1	ENST00000392991.8	protein_coding	135087674,135090195,135095864,135097781	135088139,135090344,135096019,135098065	Gene ID= ENSG00000130558.19 TPM= 4.25 Transcript Type= protein_coding
chr9	135479674	135488893	135479674	135488893	+	transcript3995.chr9.nnic@PPP1R26	transcript3995.chr9.nnic	protein_coding	135479674,135482683,135483950,135484449	135479724,135482815,135484082,135488893	Gene ID= ENSG00000196422.10 TPM= 15.67 Transcript Type= NA
chr9	135479674	135488891	135479674	135488891	+	transcript3997.chr9.nnic@PPP1R26	transcript3997.chr9.nnic	protein_coding	135479674,135482683,135483950	135479724,135482815,135488891	Gene ID= ENSG00000196422.10 TPM= 15.67 Transcript Type= NA
chr9	135479954	135488891	135479954	135488891	+	transcript3998.chr9.nic@PPP1R26	transcript3998.chr9.nic	protein_coding	135479954,135482683,135483950	135480022,135482815,135488891	Gene ID= ENSG00000196422.10 TPM= 15.67 Transcript Type= NA
chr9	135479802	135488893	135479802	135488893	+	ENST00000356818.6@PPP1R26	ENST00000356818.6	protein_coding	135479802,135482683,135483950,135484449	135480022,135482815,135484082,135488893	Gene ID= ENSG00000196422.10 TPM= 24.16 Transcript Type= protein_coding
chr9	135500631	135504672	135500631	135504672	+	ENST00000241600.9@MRPS2	ENST00000241600.9	protein_coding	135500631,135500998,135501844,135503542	135500753,135501123,135501973,135504672	Gene ID= ENSG00000122140.10 TPM= 89.22 Transcript Type= protein_coding
chr9	135932969	135961218	135932969	135961218	-	transcript4016.chr9.nic@UBAC1	transcript4016.chr9.nic	protein_coding	135961025,135955295,135953680,135947798,135946269,135945028,135939673,135938222,135932969	135961218,135955415,135953753,135947905,135946371,135945997,135939759,135938360,135933515	Gene ID= ENSG00000130560.8 TPM= 5.31 Transcript Type= NA
chr9	135932969	135961380	135932969	135961380	-	ENST00000371756.3@UBAC1	ENST00000371756.3	protein_coding	135961025,135955295,135953680,135947798,135946269,135945889,135945028,135939673,135938222,135932969	135961380,135955415,135953753,135947905,135946371,135945997,135945250,135939759,135938360,135933515	Gene ID= ENSG00000130560.8 TPM= 252.79 Transcript Type= protein_coding
chr9	135933272	135936040	135933272	135936040	+	transcript4032.chr9.nnic@NA	transcript4032.chr9.nnic	NA	135933272	135936040	Gene ID= novel_gene_chr9_4033 TPM= 2.12 Transcript Type= NA
chr9	136007087	136010253	136007087	136010253	-	transcript4034.chr9.nnic@NA	transcript4034.chr9.nnic	NA	136007087	136010253	Gene ID= novel_gene_chr9_4035 TPM= 6.37 Transcript Type= NA
chr9	136114581	136118863	136114581	136118863	-	ENST00000418388.5@TMEM250	ENST00000418388.5	protein_coding	136118485,136114581	136118863,136117024	Gene ID= ENSG00000238227.7 TPM= 103.03 Transcript Type= protein_coding
chr9	136118030	136120334	136118030	136120334	+	transcript4039.chr9.nnic@NA	transcript4039.chr9.nnic	NA	136118030	136120334	Gene ID= novel_gene_chr9_4040 TPM= 5.31 Transcript Type= NA
chr9	136355490	136359601	136355490	136359601	+	transcript4051.chr9.nnic@GPSM1	transcript4051.chr9.nnic	protein_coding	136355490,136355690,136356342,136358014	136355525,136355846,136356550,136359601	Gene ID= ENSG00000160360.12 TPM= 14.87 Transcript Type= NA
chr9	136327476	136359605	136327476	136359605	+	ENST00000440944.5@GPSM1	ENST00000440944.5	protein_coding	136327476,136334447,136335966,136336921,136337441,136337846,136338555,136339707,136340870,136348697,136349587,136355690,136356342,136358014	136327763,136334668,136336101,136337072,136337564,136337961,136338710,136339815,136340993,136348767,136349763,136355846,136356550,136359605	Gene ID= ENSG00000160360.12 TPM= 24.43 Transcript Type= protein_coding
chr9	136353057	136359605	136353057	136359605	+	ENST00000429455.5@GPSM1	ENST00000429455.5	protein_coding	136353057,136355690,136356342,136358014	136353155,136355846,136356550,136359605	Gene ID= ENSG00000160360.12 TPM= 15.93 Transcript Type= protein_coding
chr9	136355530	136359601	136355530	136359601	+	ENST00000291775.3@GPSM1	ENST00000291775.3	protein_coding	136355530,136356342,136358014	136355846,136356550,136359601	Gene ID= ENSG00000160360.12 TPM= 12.75 Transcript Type= protein_coding
chr9	136361900	136363789	136361900	136363789	-	ENST00000371738.3@DNLZ	ENST00000371738.3	protein_coding	136363487,136362989,136361900	136363789,136363128,136362180	Gene ID= ENSG00000213221.4 TPM= 84.97 Transcript Type= protein_coding
chr9	136363956	136373681	136363956	136373681	-	ENST00000371732.9@CARD9	ENST00000371732.9	protein_coding	136373532,136371895,136371324,136370841,136370522,136370294,136369750,136367637,136367216,136366800,136365141,136364483,136363956	136373681,136372094,136371461,136371145,136370701,136370437,136369875,136367828,136367257,136366845,136365217,136364559,136364401	Gene ID= ENSG00000187796.14 TPM= 1.06 Transcript Type= protein_coding
chr9	136401922	136410527	136401922	136410527	-	ENST00000357365.7@SDCCAG3	ENST00000357365.7	protein_coding	136410328,136410090,136408999,136407826,136407145,136405905,136405091,136404631,136404055,136401922	136410527,136410239,136409067,136407938,136407561,136405978,136405202,136404693,136404194,136402887	Gene ID= ENSG00000165689.16 TPM= 6.37 Transcript Type= protein_coding
chr9	136406783	136410622	136406783	136410622	-	transcript4068.chr9.nic@SDCCAG3	transcript4068.chr9.nic	protein_coding	136410328,136407826,136406783	136410622,136407938,136407561	Gene ID= ENSG00000165689.16 TPM= 2.12 Transcript Type= NA
chr9	136401951	136410600	136401951	136410600	-	ENST00000371725.7@SDCCAG3	ENST00000371725.7	protein_coding	136410328,136407826,136407145,136405905,136405091,136404631,136404055,136401951	136410600,136407938,136407561,136405978,136405202,136404693,136404194,136402887	Gene ID= ENSG00000165689.16 TPM= 3.19 Transcript Type= protein_coding
chr9	136410570	136423761	136410570	136423761	+	ENST00000371717.7@PMPCA	ENST00000371717.7	protein_coding	136410570,136411997,136412490,136412810,136414553,136416291,136416951,136418017,136418555,136418828,136419044,136421832,136423095	136410739,136412199,136412569,136412892,136414647,136416391,136417214,136418109,136418673,136418918,136419106,136421976,136423761	Gene ID= ENSG00000165688.11 TPM= 245.36 Transcript Type= protein_coding
chr9	136428625	136439866	136428625	136439866	-	transcript4077.chr9.nnic@INPP5E	transcript4077.chr9.nnic	protein_coding	136438608,136434740,136434037,136433155,136432956,136432479,136431824,136431002,136430277,136428625	136439866,136434863,136434134,136433279,136433075,136432586,136431985,136431117,136430413,136429760	Gene ID= ENSG00000148384.12 TPM= 2.12 Transcript Type= NA
chr9	136428619	136439866	136428619	136439866	-	transcript4079.chr9.nic@INPP5E	transcript4079.chr9.nic	protein_coding	136438608,136434740,136434037,136433155,136432956,136431824,136431002,136430277,136428619	136439866,136434863,136434134,136433279,136433075,136432586,136431117,136430413,136429807	Gene ID= ENSG00000148384.12 TPM= 3.19 Transcript Type= NA
chr9	136435513	136439823	136435513	136439823	-	ENST00000635815.1@INPP5E	ENST00000635815.1	protein_coding	136435513	136439823	Gene ID= ENSG00000148384.12 TPM= 4.25 Transcript Type= processed_transcript
chr9	136428619	136439822	136428619	136439822	-	ENST00000371712.3@INPP5E	ENST00000371712.3	protein_coding	136438608,136434740,136434037,136433155,136432956,136432479,136431824,136431002,136430277,136428619	136439822,136434863,136434134,136433279,136433075,136432586,136431985,136431117,136430413,136429807	Gene ID= ENSG00000148384.12 TPM= 27.62 Transcript Type= protein_coding
chr9	136440493	136441378	136440493	136441378	-	transcript4088.chr9.nnic@NA	transcript4088.chr9.nnic	NA	136440493	136441378	Gene ID= novel_gene_chr9_4089 TPM= 3.19 Transcript Type= NA
chr9	136658856	136672678	136658856	136672678	+	ENST00000371699.5@EGFL7	ENST00000371699.5	protein_coding	136658856,136664692,136668241,136668557,136669606,136669914,136670169,136670950,136671926,136672264	136659630,136664785,136668362,136668673,136669721,136670009,136670330,136671014,136672088,136672678	Gene ID= ENSG00000172889.15 TPM= 2.89 Transcript Type= protein_coding
chr9	136662927	136672677	136662927	136672677	+	ENST00000308874.11@EGFL7	ENST00000308874.11	protein_coding	136662927,136663408,136664692,136668241,136668557,136669606,136669914,136670169,136670950,136671926,136672264	136663108,136663623,136664785,136668362,136668673,136669721,136670009,136670330,136671014,136672088,136672677	Gene ID= ENSG00000172889.15 TPM= 3.82 Transcript Type= protein_coding
chr9	136662915	136672678	136662915	136672678	+	transcript4102.chr9.nic@EGFL7	transcript4102.chr9.nic	protein_coding	136662915,136664692,136668557,136669606,136669914,136670169,136670950,136671926,136672264	136663108,136664785,136668673,136669721,136670009,136670330,136671014,136672088,136672678	Gene ID= ENSG00000172889.15 TPM= 8.7 Transcript Type= NA
chr9	136667021	136672678	136667021	136672678	+	transcript4108.chr9.nic@EGFL7	transcript4108.chr9.nic	protein_coding	136667021,136668557,136669606,136669914,136670169,136670950,136671926,136672264	136668362,136668673,136669721,136670009,136670330,136671014,136672088,136672678	Gene ID= ENSG00000172889.15 TPM= 7.85 Transcript Type= NA
chr9	136671140	136672678	136671140	136672678	+	transcript4121.chr9.nnic@EGFL7	transcript4121.chr9.nnic	protein_coding	136671140,136671293,136672264	136671240,136672088,136672678	Gene ID= ENSG00000172889.15 TPM= 10.96 Transcript Type= NA
chr9	136671145	136672678	136671145	136672678	+	transcript4123.chr9.nnic@EGFL7	transcript4123.chr9.nnic	protein_coding	136671145,136671321,136672264	136671220,136672088,136672678	Gene ID= ENSG00000172889.15 TPM= 8.84 Transcript Type= NA
chr9	136671140	136672678	136671140	136672678	+	transcript4128.chr9.nnic@EGFL7	transcript4128.chr9.nnic	protein_coding	136671140,136671293	136671240,136672678	Gene ID= ENSG00000172889.15 TPM= 6.69 Transcript Type= NA
chr9	136662930	136672678	136662930	136672678	+	ENST00000406555.7@EGFL7	ENST00000406555.7	protein_coding	136662930,136664692,136668241,136668557,136669606,136669914,136670169,136670950,136671926,136672264	136663108,136664785,136668362,136668673,136669721,136670009,136670330,136671014,136672088,136672678	Gene ID= ENSG00000172889.15 TPM= 39.32 Transcript Type= protein_coding
chr9	136665792	136672678	136665792	136672678	+	ENST00000371698.3@EGFL7	ENST00000371698.3	protein_coding	136665792,136668241,136668557,136669606,136669914,136670169,136670950,136671926,136672264	136665817,136668362,136668673,136669721,136670009,136670330,136671014,136672088,136672678	Gene ID= ENSG00000172889.15 TPM= 13.48 Transcript Type= protein_coding
chr9	136673143	136687442	136673143	136687442	-	transcript4114.chr9.nic@AGPAT2	transcript4114.chr9.nic	protein_coding	136687176,136676961,136676585,136674735,136673143	136687442,136677556,136676680,136674807,136673927	Gene ID= ENSG00000169692.12 TPM= 12.4 Transcript Type= NA
chr9	136673143	136687398	136673143	136687398	-	ENST00000371694.7@AGPAT2	ENST00000371694.7	protein_coding	136687176,136677423,136676961,136674735,136673143	136687398,136677556,136677136,136674807,136673927	Gene ID= ENSG00000169692.12 TPM= 20.89 Transcript Type= protein_coding
chr9	136673143	136687423	136673143	136687423	-	ENST00000371696.6@AGPAT2	ENST00000371696.6	protein_coding	136687176,136677423,136676961,136676585,136674735,136673143	136687423,136677556,136677136,136676680,136674807,136673927	Gene ID= ENSG00000169692.12 TPM= 170.66 Transcript Type= protein_coding
chr9	136712503	136724050	136712503	136724050	+	transcript4140.chr9.nnic@FAM69B	transcript4140.chr9.nnic	protein_coding	136712503,136717577,136721966,136722125,136722962	136712728,136717711,136722028,136722301,136724050	Gene ID= ENSG00000165716.10 TPM= 6.9 Transcript Type= NA
chr9	136712570	136724050	136712570	136724050	+	ENST00000371692.8@FAM69B	ENST00000371692.8	protein_coding	136712570,136717577,136721921,136722125,136722962	136712728,136717711,136722028,136722301,136724050	Gene ID= ENSG00000165716.10 TPM= 60.01 Transcript Type= protein_coding
chr9	136716265	136718252	136716265	136718252	-	transcript4150.chr9.nnic@NA	transcript4150.chr9.nnic	NA	136718195,136716265	136718252,136718122	Gene ID= novel_gene_chr9_4151 TPM= 4.25 Transcript Type= NA
chr9	136724658	136728184	136724658	136728184	-	ENST00000416970.5@SNHG7	ENST00000416970.5	antisense_RNA	136727881,136727046,136726311,136725055,136724658	136728184,136727086,136726416,136725110,136724939	Gene ID= ENSG00000233016.6 TPM= 1.06 Transcript Type= antisense_RNA
chr9	136724598	136728184	136724598	136728184	-	transcript4144.chr9.nic@SNHG7	transcript4144.chr9.nic	antisense_RNA	136727881,136727046,136726311,136724598	136728184,136727086,136726416,136725110	Gene ID= ENSG00000233016.6 TPM= 5.31 Transcript Type= NA
chr9	136738167	136743356	136738167	136743356	-	ENST00000406721.7@LCN10	ENST00000406721.7	protein_coding	136741881,136741656,136741252,136740836,136739950,136738167	136743356,136741737,136741361,136740943,136740048,136739553	Gene ID= ENSG00000187922.13 TPM= 2.12 Transcript Type= retained_intron
chr9	136791334	136793257	136791334	136793257	+	transcript4177.chr9.nnic@TMEM141	transcript4177.chr9.nnic	protein_coding	136791334,136791711,136792251,136792819	136791424,136791777,136792358,136793257	Gene ID= ENSG00000244187.7 TPM= 2.97 Transcript Type= NA
chr9	136791357	136793257	136791357	136793257	+	transcript4189.chr9.nnic@TMEM141	transcript4189.chr9.nnic	protein_coding	136791357,136792251,136792819	136791424,136792358,136793257	Gene ID= ENSG00000244187.7 TPM= 2.97 Transcript Type= NA
chr9	136791355	136793257	136791355	136793257	+	ENST00000290079.8@TMEM141	ENST00000290079.8	protein_coding	136791355,136791711,136791947,136792251,136792819	136791424,136791777,136792030,136792358,136793257	Gene ID= ENSG00000244187.7 TPM= 23.16 Transcript Type= protein_coding
chr9	136791368	136793256	136791368	136793256	+	ENST00000465017.5@TMEM141	ENST00000465017.5	protein_coding	136791368,136791626,136791947,136792251,136792819	136791424,136791777,136792030,136792358,136793256	Gene ID= ENSG00000244187.7 TPM= 4.04 Transcript Type= processed_transcript
chr9	136791372	136793256	136791372	136793256	+	ENST00000483187.5@TMEM141	ENST00000483187.5	protein_coding	136791372,136791947,136792251,136792819	136791424,136792030,136792358,136793256	Gene ID= ENSG00000244187.7 TPM= 6.16 Transcript Type= processed_transcript
chr9	136807915	136840185	136807915	136840185	+	transcript4160.chr9.nic@RABL6	transcript4160.chr9.nic	protein_coding	136807915,136823525,136825779,136828494,136829393,136831721,136832265,136835742,136837346,136837862,136838909,136839222,136839694,136840154	136808326,136823659,136825826,136828546,136829484,136831861,136832370,136835845,136837662,136838015,136839121,136839486,136839865,136840185	Gene ID= ENSG00000196642.18 TPM= 49.92 Transcript Type= NA
chr9	136807943	136834340	136807943	136834340	+	ENST00000371671.9@RABL6	ENST00000371671.9	protein_coding	136807943,136823525,136825779,136828494,136829393,136831721,136832265,136833720	136808326,136823659,136825826,136828546,136829484,136831861,136832370,136834340	Gene ID= ENSG00000196642.18 TPM= 3.19 Transcript Type= protein_coding
chr9	136807948	136809615	136807948	136809615	+	transcript4197.chr9.nnic@NA	transcript4197.chr9.nnic	NA	136807948	136809615	Gene ID= novel_gene_chr9_4198 TPM= 2.12 Transcript Type= NA
chr9	136844415	136848801	136844415	136848801	+	ENST00000436881.2@C9orf172	ENST00000436881.2	protein_coding	136844415	136848801	Gene ID= ENSG00000232434.2 TPM= 33.99 Transcript Type= protein_coding
chr9	136847933	136851022	136847933	136851022	+	transcript4171.chr9.nnic@PHPT1	transcript4171.chr9.nnic	protein_coding	136847933,136849111,136850013,136850506,136850755	136848283,136849590,136850137,136850560,136851022	Gene ID= ENSG00000054148.17 TPM= 15.93 Transcript Type= NA
chr9	136847902	136851022	136847902	136851022	+	transcript4179.chr9.nnic@PHPT1	transcript4179.chr9.nnic	protein_coding	136847902,136849228,136850013,136850755	136848283,136849590,136850137,136851022	Gene ID= ENSG00000054148.17 TPM= 223.58 Transcript Type= NA
chr9	136847933	136851022	136847933	136851022	+	transcript4184.chr9.nnic@PHPT1	transcript4184.chr9.nnic	protein_coding	136847933,136849111,136850013,136850755	136848283,136849590,136850137,136851022	Gene ID= ENSG00000054148.17 TPM= 241.64 Transcript Type= NA
chr9	136847937	136851022	136847937	136851022	+	transcript4195.chr9.nic@PHPT1	transcript4195.chr9.nic	protein_coding	136847937,136850013	136849590,136851022	Gene ID= ENSG00000054148.17 TPM= 15.93 Transcript Type= NA
chr9	136849779	136851022	136849779	136851022	+	ENST00000463215.1@PHPT1	ENST00000463215.1	protein_coding	136849779,136850755	136850137,136851022	Gene ID= ENSG00000054148.17 TPM= 77.54 Transcript Type= processed_transcript
chr9	136862119	136866286	136862119	136866286	-	ENST00000224073.5@EDF1	ENST00000224073.5	protein_coding	136866181,136863820,136863288,136862906,136862119	136866286,136863871,136863448,136862999,136862345	Gene ID= ENSG00000107223.12 TPM= 299.53 Transcript Type= protein_coding
chr9	136862119	136866285	136862119	136866285	-	ENST00000371649.5@EDF1	ENST00000371649.5	protein_coding	136866181,136863820,136863288,136862906,136862119	136866285,136863871,136863448,136862999,136862496	Gene ID= ENSG00000107223.12 TPM= 19.12 Transcript Type= protein_coding
chr9	136886496	136926607	136886496	136926607	+	transcript4210.chr9.nnic@TRAF2	transcript4210.chr9.nnic	protein_coding	136886496,136889469,136889670,136890349,136898713,136899594,136900422,136908070,136909920,136916541,136920234,136921038,136923852,136925683	136886541,136889562,136889736,136890542,136898928,136899672,136900520,136908231,136909994,136916615,136920515,136921215,136924000,136926607	Gene ID= ENSG00000127191.17 TPM= 3.72 Transcript Type= NA
chr9	136886492	136926607	136886492	136926607	+	transcript4212.chr9.nnic@TRAF2	transcript4212.chr9.nnic	protein_coding	136886492,136889670,136890349,136898713,136899594,136900422,136908070,136909920,136916541,136920234,136921038,136923852,136925683	136886541,136889736,136890542,136898928,136899672,136900520,136908231,136909994,136916615,136920515,136921215,136924000,136926607	Gene ID= ENSG00000127191.17 TPM= 3.19 Transcript Type= NA
chr9	136889220	136926607	136889220	136926607	+	transcript4214.chr9.nic@TRAF2	transcript4214.chr9.nic	protein_coding	136889220,136889670,136890349,136898713,136899594,136900422,136908070,136909920,136916541,136920234,136921038,136923852,136925683	136889562,136889736,136890542,136898928,136899672,136900520,136908231,136909994,136916615,136920515,136921215,136924000,136926607	Gene ID= ENSG00000127191.17 TPM= 3.72 Transcript Type= NA
chr9	136921968	136926607	136921968	136926607	+	transcript4219.chr9.nic@TRAF2	transcript4219.chr9.nic	protein_coding	136921968,136923852,136925683	136922493,136924000,136926607	Gene ID= ENSG00000127191.17 TPM= 3.19 Transcript Type= NA
chr9	136889220	136890835	136889220	136890835	+	transcript4220.chr9.nic@TRAF2	transcript4220.chr9.nic	protein_coding	136889220,136889670	136889562,136890835	Gene ID= ENSG00000127191.17 TPM= 3.19 Transcript Type= NA
chr9	136886518	136926607	136886518	136926607	+	ENST00000247668.6@TRAF2	ENST00000247668.6	protein_coding	136886518,136898713,136899594,136900422,136908070,136909920,136916541,136920234,136921038,136923852,136925683	136886541,136898928,136899672,136900520,136908231,136909994,136916615,136920515,136921215,136924000,136926607	Gene ID= ENSG00000127191.17 TPM= 18.06 Transcript Type= protein_coding
chr9	136940435	136944744	136940435	136944744	-	transcript4237.chr9.nic@FBXW5	transcript4237.chr9.nic	protein_coding	136944594,136943891,136943349,136942769,136942547,136942100,136941537,136941251,136940435	136944744,136944106,136943506,136942943,136942695,136942466,136941684,136941463,136941171	Gene ID= ENSG00000159069.13 TPM= 136.82 Transcript Type= NA
chr9	136940435	136944650	136940435	136944650	-	ENST00000325285.7@FBXW5	ENST00000325285.7	protein_coding	136944594,136943891,136943349,136942769,136942547,136942046,136941537,136941251,136940435	136944650,136944106,136943506,136942943,136942695,136942466,136941684,136941463,136941171	Gene ID= ENSG00000159069.13 TPM= 695.68 Transcript Type= protein_coding
chr9	136940435	136944688	136940435	136944688	-	ENST00000483559.5@FBXW5	ENST00000483559.5	protein_coding	136944594,136943891,136943349,136942769,136942046,136941537,136941251,136940435	136944688,136944106,136943506,136942943,136942695,136941684,136941463,136941171	Gene ID= ENSG00000159069.13 TPM= 18.02 Transcript Type= retained_intron
chr9	136977505	136981738	136977505	136981738	+	ENST00000371625.7@PTGDS	ENST00000371625.7	protein_coding	136977505,136978993,136979223,136979946,136980183,136980833,136981579	136977692,136979132,136979299,136980062,136980284,136980855,136981738	Gene ID= ENSG00000107317.12 TPM= 1164.34 Transcript Type= protein_coding
chr9	136981904	136985758	136981904	136985758	+	ENST00000482657.1@LCNL1	ENST00000482657.1	protein_coding	136981904,136984713	136984563,136985758	Gene ID= ENSG00000214402.6 TPM= 4.25 Transcript Type= retained_intron
chr9	136992415	136993976	136992415	136993976	+	transcript4305.chr9.nic@PAXX	transcript4305.chr9.nic	protein_coding	136992415,136992640,136992925,136993343,136993580,136993766	136992562,136992700,136993243,136993411,136993664,136993976	Gene ID= ENSG00000148362.10 TPM= 3.45 Transcript Type= NA
chr9	136992422	136993976	136992422	136993976	+	transcript4306.chr9.nnic@PAXX	transcript4306.chr9.nnic	protein_coding	136992422,136992640,136993053,136993343,136993580,136993766	136992562,136992700,136993243,136993411,136993664,136993976	Gene ID= ENSG00000148362.10 TPM= 3.45 Transcript Type= NA
chr9	136992418	136993976	136992418	136993976	+	ENST00000371620.3@PAXX	ENST00000371620.3	protein_coding	136992418,136992640,136992925,136993053,136993343,136993580,136993766	136992562,136992700,136992974,136993243,136993411,136993664,136993976	Gene ID= ENSG00000148362.10 TPM= 24.7 Transcript Type= protein_coding
chr9	136992463	136993984	136992463	136993984	+	ENST00000498095.4@PAXX	ENST00000498095.4	protein_coding	136992463,136992640,136993343,136993580,136993766	136992562,136993243,136993411,136993664,136993984	Gene ID= ENSG00000148362.10 TPM= 18.32 Transcript Type= retained_intron
chr9	136994635	136996803	136994635	136996803	-	ENST00000494426.1@CLIC3	ENST00000494426.1	protein_coding	136996511,136995648,136995442,136995186,136994930,136994635	136996803,136995757,136995567,136995292,136995105,136994839	Gene ID= ENSG00000169583.12 TPM= 25.49 Transcript Type= protein_coding
chr9	137007234	137028288	137007234	137028288	-	ENST00000371605.7@ABCA2	ENST00000371605.7	protein_coding	137028075,137024143,137022941,137022702,137022351,137021891,137021392,137020694,137020336,137019178,137018903,137018719,137018178,137017973,137017787,137017502,137017196,137016920,137016574,137016291,137015962,137015675,137015414,137014913,137014690,137014168,137013832,137013461,137013002,137012712,137012485,137012265,137012102,137011844,137011634,137011407,137011186,137010973,137010620,137010193,137009983,137009769,137009541,137009370,137008951,137008731,137008416,137007234	137028288,137024236,137023052,137022865,137022478,137022001,137021610,137021061,137020495,137019306,137019070,137018815,137018351,137018075,137017901,137017692,137017346,137017124,137016738,137016471,137016174,137015871,137015596,137015097,137014810,137014404,137014038,137013563,137013318,137012925,137012590,137012376,137012162,137012018,137011749,137011554,137011309,137011105,137010737,137010371,137010124,137009903,137009644,137009462,137009053,137008868,137008622,137007964	Gene ID= ENSG00000107331.16 TPM= 63.73 Transcript Type= protein_coding
chr9	137037582	137046194	137037582	137046194	-	transcript4316.chr9.nnic@NPDC1	transcript4316.chr9.nnic	protein_coding	137045878,137042927,137041062,137040814,137040671,137040514,137040357,137039971,137037582	137046194,137043073,137041187,137040984,137040737,137040598,137040436,137040067,137037910	Gene ID= ENSG00000107281.9 TPM= 7.44 Transcript Type= NA
chr9	137039470	137046201	137039470	137046201	-	transcript4329.chr9.nnic@NPDC1	transcript4329.chr9.nnic	protein_coding	137042927,137041062,137040814,137040671,137040514,137040357,137039971,137039470	137046201,137041187,137040984,137040737,137040598,137040436,137040155,137039864	Gene ID= ENSG00000107281.9 TPM= 12.11 Transcript Type= NA
chr9	137039470	137046203	137039470	137046203	-	ENST00000371601.4@NPDC1	ENST00000371601.4	protein_coding	137045878,137042927,137041062,137040814,137040671,137040514,137040357,137039971,137039470	137046203,137043073,137041187,137040984,137040737,137040598,137040436,137040067,137039864	Gene ID= ENSG00000107281.9 TPM= 163.65 Transcript Type= protein_coding
chr9	137077501	137084538	137077501	137084538	+	ENST00000409858.7@UAP1L1	ENST00000409858.7	protein_coding	137077501,137078050,137078502,137078976,137079256,137080002,137080689,137081998,137082637	137077821,137078254,137078677,137079148,137079449,137080142,137080874,137082064,137084538	Gene ID= ENSG00000197355.10 TPM= 2.12 Transcript Type= protein_coding
chr9	137084946	137086817	137084946	137086817	-	ENST00000596585.3@MAN1B1-AS1	ENST00000596585.3	antisense_RNA	137084946	137086817	Gene ID= ENSG00000268996.3 TPM= 3.19 Transcript Type= antisense_RNA
chr9	137086985	137109181	137086985	137109181	+	transcript4338.chr9.nic@MAN1B1	transcript4338.chr9.nic	protein_coding	137086985,137088075,137088869,137096237,137097828,137099696,137101005,137101484,137106125,137106689,137107250,137107531,137108531	137087218,137088183,137089005,137096391,137097937,137099881,137101153,137101672,137106315,137106809,137107447,137107662,137109181	Gene ID= ENSG00000177239.14 TPM= 3.72 Transcript Type= NA
chr9	137086927	137109187	137086927	137109187	+	ENST00000371589.8@MAN1B1	ENST00000371589.8	protein_coding	137086927,137088075,137088869,137096237,137097828,137099696,137101005,137101484,137106125,137106689,137107250,137107531,137108388	137087218,137088183,137089005,137096391,137097937,137099881,137101153,137101672,137106315,137106809,137107447,137107662,137109187	Gene ID= ENSG00000177239.14 TPM= 60.01 Transcript Type= protein_coding
chr9	137110546	137114756	137110546	137114756	-	transcript4347.chr9.nic@DPP7	transcript4347.chr9.nic	protein_coding	137114647,137114463,137114243,137113865,137113361,137113206,137112953,137112745,137112112,137111941,137111690,137110880,137110546	137114756,137114576,137114382,137114028,137113496,137113287,137113119,137112805,137112230,137112029,137111754,137110950,137110783	Gene ID= ENSG00000176978.13 TPM= 11.43 Transcript Type= NA
chr9	137110546	137114752	137110546	137114752	-	transcript4349.chr9.nic@DPP7	transcript4349.chr9.nic	protein_coding	137114463,137114243,137113865,137113361,137113206,137112953,137112745,137112112,137111873,137111690,137110880,137110546	137114752,137114382,137114028,137113496,137113287,137113119,137112805,137112230,137112029,137111754,137110950,137110783	Gene ID= ENSG00000176978.13 TPM= 17.8 Transcript Type= NA
chr9	137110546	137114756	137110546	137114756	-	transcript4353.chr9.nnic@DPP7	transcript4353.chr9.nnic	protein_coding	137114647,137114463,137114243,137113865,137113361,137112953,137112745,137112112,137111873,137111690,137110880,137110546	137114756,137114576,137114382,137114028,137113496,137113119,137112805,137112230,137112029,137111754,137110950,137110783	Gene ID= ENSG00000176978.13 TPM= 17.8 Transcript Type= NA
chr9	137110546	137114756	137110546	137114756	-	transcript4355.chr9.nic@DPP7	transcript4355.chr9.nic	protein_coding	137114647,137114463,137114243,137113865,137113361,137113206,137112953,137112112,137111873,137111690,137110880,137110546	137114756,137114576,137114382,137114028,137113496,137113287,137113119,137112805,137112029,137111754,137110950,137110783	Gene ID= ENSG00000176978.13 TPM= 28.35 Transcript Type= NA
chr9	137110542	137114718	137110542	137114718	-	ENST00000371579.6@DPP7	ENST00000371579.6	protein_coding	137114647,137114463,137114243,137113865,137113361,137113206,137112953,137112745,137112112,137111873,137111690,137110880,137110542	137114718,137114576,137114382,137114028,137113496,137113287,137113119,137112805,137112230,137112029,137111754,137110950,137110783	Gene ID= ENSG00000176978.13 TPM= 336.45 Transcript Type= protein_coding
chr9	137128693	137129742	137128693	137129742	-	transcript4377.chr9.nnic@NA	transcript4377.chr9.nnic	NA	137128693	137129742	Gene ID= novel_gene_chr9_4378 TPM= 3.19 Transcript Type= NA
chr9	137174784	137188537	137174784	137188537	-	ENST00000323927.2@ANAPC2	ENST00000323927.2	protein_coding	137188416,137187481,137186224,137184913,137183672,137183125,137181681,137180788,137180452,137180181,137175708,137175237,137174784	137188537,137188103,137186356,137185087,137183791,137183242,137181862,137180929,137180527,137180384,137175837,137175472,137175154	Gene ID= ENSG00000176248.8 TPM= 7.44 Transcript Type= protein_coding
chr9	137188647	137190370	137188647	137190370	+	ENST00000322310.9@SSNA1	ENST00000322310.9	protein_coding	137188647,137189066,137189807	137188778,137189265,137190370	Gene ID= ENSG00000176101.11 TPM= 81.79 Transcript Type= protein_coding
chr9	137188660	137190370	137188660	137190370	+	ENST00000459860.1@SSNA1	ENST00000459860.1	protein_coding	137188660,137189807	137189265,137190370	Gene ID= ENSG00000176101.11 TPM= 80.72 Transcript Type= retained_intron
chr9	137188706	137190370	137188706	137190370	+	ENST00000464553.2@SSNA1	ENST00000464553.2	protein_coding	137188706,137189066,137189807	137188778,137189151,137190370	Gene ID= ENSG00000176101.11 TPM= 6.37 Transcript Type= protein_coding
chr9	137188682	137190364	137188682	137190364	+	transcript4386.chr9.nnic@NA	transcript4386.chr9.nnic	NA	137188682	137190364	Gene ID= novel_gene_chr9_4387 TPM= 5.31 Transcript Type= NA
chr9	137191617	137200798	137191617	137200798	-	ENST00000409012.4@TPRN	ENST00000409012.4	protein_coding	137198987,137192451,137192259,137191617	137200798,137192691,137192365,137192174	Gene ID= ENSG00000176058.11 TPM= 19.83 Transcript Type= protein_coding
chr9	137191619	137205669	137191619	137205669	-	transcript4390.chr9.nnic@TPRN	transcript4390.chr9.nnic	protein_coding	137203897,137192451,137192259,137191619	137205669,137192691,137192365,137192174	Gene ID= ENSG00000176058.11 TPM= 3.9 Transcript Type= NA
chr9	137191619	137205667	137191619	137205667	-	transcript4391.chr9.nic@TPRN	transcript4391.chr9.nic	protein_coding	137204104,137192451,137192259,137191619	137205667,137192691,137192365,137192174	Gene ID= ENSG00000176058.11 TPM= 10.27 Transcript Type= NA
chr9	137204082	137205638	137204082	137205638	-	ENST00000343666.5@TMEM203	ENST00000343666.5	protein_coding	137204082	137205638	Gene ID= ENSG00000187713.6 TPM= 105.15 Transcript Type= protein_coding
chr9	137205680	137217009	137205680	137217009	+	transcript4393.chr9.nic@NDOR1	transcript4393.chr9.nic	protein_coding	137205680,137206232,137212502,137213967,137214204,137214570,137214798,137215659,137215899,137216094,137216272	137205912,137206309,137213878,137214068,137214413,137214691,137215521,137215805,137216017,137216188,137217009	Gene ID= ENSG00000188566.13 TPM= 4.25 Transcript Type= NA
chr9	137220247	137221323	137220247	137221323	-	ENST00000391553.2@RNF208	ENST00000391553.2	protein_coding	137220247	137221323	Gene ID= ENSG00000212864.3 TPM= 55.23 Transcript Type= protein_coding
chr9	137239233	137240891	137239233	137240891	-	transcript4400.chr9.nnic@NA	transcript4400.chr9.nnic	NA	137239233	137240891	Gene ID= novel_gene_chr9_4401 TPM= 2.12 Transcript Type= NA
chr9	137241213	137243707	137241213	137243707	+	ENST00000340384.4@TUBB4B	ENST00000340384.4	protein_coding	137241213,137241721,137241911,137242496	137241417,137241829,137242021,137243707	Gene ID= ENSG00000188229.5 TPM= 504 Transcript Type= protein_coding
chr9	137241288	137243706	137241288	137243706	+	ENST00000604929.1@TUBB4B	ENST00000604929.1	protein_coding	137241288,137241721,137241911	137241417,137241829,137243706	Gene ID= ENSG00000188229.5 TPM= 232.08 Transcript Type= retained_intron
chr9	137255173	137273546	137255173	137273546	+	ENST00000343053.4@NELFB	ENST00000343053.4	protein_coding	137255173,137255907,137256329,137256824,137263037,137264245,137265877,137266331,137266944,137267240,137272081,137272507,137272782	137255611,137256070,137256428,137257054,137263222,137264357,137265979,137266426,137267086,137267346,137272222,137272615,137273546	Gene ID= ENSG00000188986.6 TPM= 168.17 Transcript Type= protein_coding
chr9	137255196	137273546	137255196	137273546	+	transcript4413.chr9.nic@NELFB	transcript4413.chr9.nic	protein_coding	137255196,137255907,137256824,137263037,137264245,137265877,137266331,137266944,137267240,137272081,137272507,137272782	137255611,137256428,137257054,137263222,137264357,137265979,137266426,137267086,137267346,137272222,137272615,137273546	Gene ID= ENSG00000188986.6 TPM= 14.16 Transcript Type= NA
chr9	137277749	137282641	137277749	137282641	+	ENST00000357503.2@TOR4A	ENST00000357503.2	protein_coding	137277749,137278653	137277907,137282641	Gene ID= ENSG00000198113.2 TPM= 35.05 Transcript Type= protein_coding
chr9	137300482	137302251	137300482	137302251	-	ENST00000356628.3@NRARP	ENST00000356628.3	protein_coding	137300482	137302251	Gene ID= ENSG00000198435.3 TPM= 7.44 Transcript Type= protein_coding
chr9	137306905	137423262	137306905	137423262	-	ENST00000340951.8@EXD3	ENST00000340951.8	protein_coding	137423114,137395303,137383313,137373426,137372905,137367936,137366493,137356268,137354700,137354339,137352620,137352066,137351318,137351038,137349369,137349110,137348071,137324090,137323725,137309607,137307608,137306905	137423262,137395404,137383377,137373599,137373072,137367989,137366632,137356368,137354773,137354377,137352786,137352201,137351528,137351147,137349531,137349282,137348238,137324143,137323856,137309700,137307646,137307263	Gene ID= ENSG00000187609.15 TPM= 2.12 Transcript Type= protein_coding
chr9	137366146	137423170	137366146	137423170	-	transcript4441.chr9.nic@EXD3	transcript4441.chr9.nic	protein_coding	137423114,137395303,137383313,137373426,137372905,137366146	137423170,137395404,137383377,137373599,137373072,137367989	Gene ID= ENSG00000187609.15 TPM= 3.19 Transcript Type= NA
chr9	137366145	137423155	137366145	137423155	-	ENST00000479452.5@EXD3	ENST00000479452.5	protein_coding	137423114,137395303,137383313,137373426,137372905,137367936,137366493,137366145	137423155,137395404,137383377,137373599,137373072,137367989,137366632,137366361	Gene ID= ENSG00000187609.15 TPM= 5.31 Transcript Type= protein_coding
chr9	137391802	137423162	137391802	137423162	-	ENST00000465160.2@EXD3	ENST00000465160.2	protein_coding	137423114,137395303,137391802	137423162,137395404,137393235	Gene ID= ENSG00000187609.15 TPM= 1.06 Transcript Type= protein_coding
chr9	137423350	137434406	137423350	137434406	+	ENST00000341349.6@NOXA1	ENST00000341349.6	protein_coding	137423350,137426248,137428033,137428882,137429276,137430784,137431075,137431236,137433029,137433205,137433453,137433750,137433965,137434203	137423706,137426330,137428141,137429016,137429383,137430843,137431100,137431341,137433074,137433263,137433607,137433864,137434079,137434406	Gene ID= ENSG00000188747.8 TPM= 6.37 Transcript Type= protein_coding
chr9	137447573	137459334	137447573	137459334	-	ENST00000371473.7@NSMF	ENST00000371473.7	protein_coding	137459032,137458488,137457407,137456411,137455629,137455239,137454391,137453056,137452736,137452553,137452365,137450176,137449923,137449599,137447573	137459334,137458549,137457901,137456486,137455634,137455307,137454443,137453180,137452819,137452586,137452435,137450255,137450025,137449674,137449491	Gene ID= ENSG00000165802.22 TPM= 3.19 Transcript Type= protein_coding
chr9	137447573	137459334	137447573	137459334	-	ENST00000371474.7@NSMF	ENST00000371474.7	protein_coding	137459032,137458488,137457407,137456411,137454391,137453731,137453056,137452736,137452553,137452365,137450176,137449923,137449599,137447573	137459334,137458549,137457901,137456486,137454443,137453820,137453180,137452819,137452586,137452435,137450255,137450025,137449674,137449491	Gene ID= ENSG00000165802.22 TPM= 3.19 Transcript Type= protein_coding
chr9	137448232	137459334	137448232	137459334	-	ENST00000265663.12@NSMF	ENST00000265663.12	protein_coding	137459032,137458488,137457407,137456411,137455239,137454391,137453731,137453056,137452736,137452553,137452365,137450176,137449923,137449599,137448232	137459334,137458549,137457901,137456486,137455307,137454443,137453820,137453180,137452819,137452586,137452435,137450255,137450025,137449674,137449491	Gene ID= ENSG00000165802.22 TPM= 20.18 Transcript Type= protein_coding
chr9	137459953	137550534	137459953	137550534	-	ENST00000406427.5@PNPLA7	ENST00000406427.5	protein_coding	137550168,137547585,137547309,137546830,137543724,137543432,137542642,137540642,137522729,137521636,137519917,137515379,137505983,137505614,137501650,137500691,137498114,137497187,137495033,137493013,137484587,137480960,137480312,137479056,137478034,137467317,137464340,137464126,137463415,137462685,137462179,137461931,137461536,137460634,137459953	137550534,137547659,137547396,137546909,137543815,137543572,137542801,137540722,137522857,137521716,137520043,137515519,137506083,137505760,137501727,137500896,137498245,137497310,137495146,137493082,137484736,137481023,137480480,137479238,137478152,137467473,137464456,137464195,137463531,137462833,137462331,137462041,137461620,137460737,137460476	Gene ID= ENSG00000130653.15 TPM= 11.68 Transcript Type= protein_coding
chr9	137551199	137552555	137551199	137552555	+	ENST00000371443.5@MRPL41	ENST00000371443.5	protein_coding	137551199,137552074	137551978,137552555	Gene ID= ENSG00000182154.7 TPM= 569.32 Transcript Type= protein_coding
chr9	137554904	137578926	137554904	137578926	-	transcript4471.chr9.nic@DPH7	transcript4471.chr9.nic	protein_coding	137578625,137577470,137576309,137575709,137574752,137574208,137565085,137564893,137564434,137554904	137578926,137577603,137576402,137576167,137574846,137574380,137565154,137564958,137564606,137555648	Gene ID= ENSG00000148399.12 TPM= 7.62 Transcript Type= NA
chr9	137554904	137578926	137554904	137578926	-	transcript4481.chr9.nic@DPH7	transcript4481.chr9.nic	protein_coding	137578625,137577470,137574752,137574208,137565085,137564893,137564434,137554904	137578926,137577603,137576167,137574380,137565154,137564958,137564606,137555648	Gene ID= ENSG00000148399.12 TPM= 2.47 Transcript Type= NA
chr9	137554909	137578935	137554909	137578935	-	ENST00000277540.6@DPH7	ENST00000277540.6	protein_coding	137578625,137577470,137576080,137574752,137574208,137565085,137564893,137564434,137554909	137578935,137577603,137576167,137574843,137574380,137565154,137564958,137564606,137555648	Gene ID= ENSG00000148399.12 TPM= 9.74 Transcript Type= protein_coding
chr9	137554904	137578924	137554904	137578924	-	transcript4493.chr9.nic@DPH7	transcript4493.chr9.nic	protein_coding	137578625,137574752,137574208,137565085,137564434,137554904	137578924,137576167,137574380,137565154,137564606,137555648	Gene ID= ENSG00000148399.12 TPM= 3.54 Transcript Type= NA
chr9	137582079	137590490	137582079	137590490	-	ENST00000298585.2@ZMYND19	ENST00000298585.2	protein_coding	137590213,137588659,137587717,137586967,137582983,137582079	137590490,137588718,137587823,137587107,137583163,137582686	Gene ID= ENSG00000165724.5 TPM= 22.31 Transcript Type= protein_coding
chr9	137582142	137585021	137582142	137585021	+	transcript4498.chr9.nnic@NA	transcript4498.chr9.nnic	NA	137582142	137585021	Gene ID= novel_gene_chr9_4499 TPM= 3.19 Transcript Type= NA
chr9	137605642	137615358	137605642	137615358	+	transcript4513.chr9.nic@ARRDC1	transcript4513.chr9.nic	protein_coding	137605642,137612896,137613413,137613615,137614032,137614299,137614559,137615074	137605835,137613006,137613510,137613769,137614214,137614475,137615000,137615358	Gene ID= ENSG00000197070.13 TPM= 4.25 Transcript Type= NA
chr9	137605642	137615359	137605642	137615359	+	transcript4521.chr9.nic@ARRDC1	transcript4521.chr9.nic	protein_coding	137605642,137612896,137613460,137613615,137614032,137614299,137614559	137605835,137613006,137613510,137613769,137614214,137614475,137615359	Gene ID= ENSG00000197070.13 TPM= 5.31 Transcript Type= NA
chr9	137605654	137615358	137605654	137615358	+	ENST00000371421.8@ARRDC1	ENST00000371421.8	protein_coding	137605654,137612896,137613460,137613615,137614032,137614299,137614559,137615074	137605835,137613006,137613510,137613769,137614214,137614475,137615000,137615358	Gene ID= ENSG00000197070.13 TPM= 41.42 Transcript Type= protein_coding
chr9	137615331	137618793	137615331	137618793	-	transcript4538.chr9.nnic@NA	transcript4538.chr9.nnic	NA	137615331	137618793	Gene ID= novel_gene_chr9_4539 TPM= 4.25 Transcript Type= NA
chr9	137615332	137618813	137615332	137618813	-	ENST00000371417.3@ARRDC1-AS1	ENST00000371417.3	antisense_RNA	137618531,137617934,137615332	137618813,137618191,137616199	Gene ID= ENSG00000203993.4 TPM= 21.24 Transcript Type= antisense_RNA
chr9	137618963	137836127	137618963	137836127	+	ENST00000460843.5@EHMT1	ENST00000460843.5	protein_coding	137618963,137710967,137716626,137728349,137743371,137743902,137752331,137754171,137757880,137762675,137775109,137776618,137777882,137779635,137782291,137790848,137798813,137800880,137811461,137813006,137813386,137814431,137815947,137817439,137818060,137834349,137834773	137619049,137711030,137717182,137728529,137743528,137744090,137752408,137754291,137758011,137762820,137775252,137776844,137778055,137779717,137782397,137790970,137798914,137800984,137811615,137813173,137813530,137814508,137816062,137817525,137818138,137834524,137836127	Gene ID= ENSG00000181090.20 TPM= 16.99 Transcript Type= protein_coding
chr9	137618990	137764782	137618990	137764782	+	transcript4509.chr9.nic@EHMT1	transcript4509.chr9.nic	protein_coding	137618990,137710967,137716626,137728349,137743392,137743902,137752331,137754171,137757880,137762675,137764127	137619049,137711030,137717182,137728529,137743528,137744090,137752408,137754291,137758011,137762820,137764782	Gene ID= ENSG00000181090.20 TPM= 2.12 Transcript Type= NA
chr9	137618990	137730471	137618990	137730471	+	transcript4533.chr9.nic@EHMT1	transcript4533.chr9.nic	protein_coding	137618990,137710967,137716626,137728349	137619049,137711030,137717182,137730471	Gene ID= ENSG00000181090.20 TPM= 2.12 Transcript Type= NA
chr10	134922	254634	134922	254634	+	transcript8.chr10.nnic@ZMYND11	transcript8.chr10.nnic	protein_coding	134922,179994,209889,221195,236838,237585,239438,240056,240893,242021,246766,247398,248336,248903,252348	135203,180128,210048,221356,236915,237677,239525,240111,240970,242139,246973,247466,248608,249088,254634	Gene ID= ENSG00000015171.19 TPM= 8.16 Transcript Type= NA
chr10	135397	254634	135397	254634	+	transcript10.chr10.nic@ZMYND11	transcript10.chr10.nic	protein_coding	135397,179994,209889,221195,236838,237585,239438,240056,240893,242021,246766,247398,248336,248903,252348	135559,180128,210048,221356,236915,237677,239525,240111,240970,242139,246973,247466,248608,249088,254634	Gene ID= ENSG00000015171.19 TPM= 46.4 Transcript Type= NA
chr10	134916	254634	134916	254634	+	transcript16.chr10.nic@ZMYND11	transcript16.chr10.nic	protein_coding	134916,179994,209889,236838,237585,239438,240056,240893,242021,246766,247398,248336,248903,252348	135302,180128,210048,236915,237677,239525,240111,240970,242139,246973,247466,248608,249088,254634	Gene ID= ENSG00000015171.19 TPM= 6.03 Transcript Type= NA
chr10	135462	254634	135462	254634	+	transcript29.chr10.nic@ZMYND11	transcript29.chr10.nic	protein_coding	135462,179994,209889,236838,239438,240056,240893,242021,246766,247398,248336,248903,252348	135559,180128,210048,236915,239525,240111,240970,242139,246973,247466,248608,249088,254634	Gene ID= ENSG00000015171.19 TPM= 5.68 Transcript Type= NA
chr10	135484	254626	135484	254626	+	ENST00000381607.8@ZMYND11	ENST00000381607.8	protein_coding	135484,179994,209889,236838,237585,239438,240056,240893,242021,246766,247398,248336,248903,252348	135559,180128,210048,236915,237677,239525,240111,240970,242139,246973,247466,248608,249088,254626	Gene ID= ENSG00000015171.19 TPM= 29.93 Transcript Type= protein_coding
chr10	135069	254637	135069	254637	+	ENST00000381591.5@ZMYND11	ENST00000381591.5	protein_coding	135069,179994,209889,221195,236838,237585,239438,240056,240893,242021,246766,247398,248336,248903,252348	135302,180128,210048,221356,236915,237677,239525,240111,240970,242139,246973,247466,248608,249088,254637	Gene ID= ENSG00000015171.19 TPM= 11.92 Transcript Type= protein_coding
chr10	135509	254634	135509	254634	+	ENST00000402736.5@ZMYND11	ENST00000402736.5	protein_coding	135509,179994,209889,221195,236838,239438,240056,240893,242021,246766,247398,248336,248903,252348	135559,180128,210048,221356,236915,239525,240111,240970,242139,246973,247466,248608,249088,254634	Gene ID= ENSG00000015171.19 TPM= 2.5 Transcript Type= protein_coding
chr10	594877	596524	594877	596524	+	transcript36.chr10.nnic@NA	transcript36.chr10.nnic	NA	594877	596524	Gene ID= novel_gene_chr10_37 TPM= 5.31 Transcript Type= NA
chr10	806914	931705	806914	931705	-	ENST00000612396.4@LARP4B	ENST00000612396.4	protein_coding	931428,885641,884447,864123,863743,844977,842932,836403,830867,829681,829385,825764,825065,820800,817725,814946,814742,806914	931705,885760,884506,864270,863883,845055,843068,836506,830977,829734,829594,825870,825316,820845,817889,815070,814850,813213	Gene ID= ENSG00000107929.14 TPM= 42.49 Transcript Type= protein_coding
chr10	988019	1019936	988019	1019936	+	ENST00000360803.8@GTPBP4	ENST00000360803.8	protein_coding	988019,992489,995929,996106,997208,999003,1000677,1000948,1005818,1007018,1008958,1009529,1010420,1012465,1014247,1015753,1017075	988527,992659,996032,996242,997308,999095,1000868,1001013,1005907,1007128,1009035,1009580,1010520,1012662,1014312,1015896,1019936	Gene ID= ENSG00000107937.18 TPM= 29.74 Transcript Type= protein_coding
chr10	1022666	1044201	1022666	1044201	+	ENST00000437374.5@IDI2-AS1	ENST00000437374.5	antisense_RNA	1022666,1036789,1043529	1022783,1036893,1044201	Gene ID= ENSG00000232656.7 TPM= 1.59 Transcript Type= antisense_RNA
chr10	1022668	1044198	1022668	1044198	+	ENST00000428780.2@IDI2-AS1	ENST00000428780.2	antisense_RNA	1022668,1035814,1036789,1043529	1022783,1035976,1036893,1044198	Gene ID= ENSG00000232656.7 TPM= 11.15 Transcript Type= antisense_RNA
chr10	1040028	1056704	1040028	1056704	-	transcript69.chr10.nnic@IDI1	transcript69.chr10.nnic	protein_coding	1056309,1043301,1042632,1040028	1056704,1043393,1042762,1041504	Gene ID= ENSG00000067064.10 TPM= 4.25 Transcript Type= NA
chr10	1040028	1048897	1040028	1048897	-	transcript70.chr10.nic@IDI1	transcript70.chr10.nic	protein_coding	1048864,1043301,1042632,1040028	1048897,1044171,1042762,1041504	Gene ID= ENSG00000067064.10 TPM= 4.25 Transcript Type= NA
chr10	1049020	1050264	1049020	1050264	+	transcript77.chr10.nnic@NA	transcript77.chr10.nnic	NA	1049020	1050264	Gene ID= novel_gene_chr10_78 TPM= 3.19 Transcript Type= NA
chr10	1056799	1132170	1056799	1132170	+	transcript58.chr10.nnic@WDR37	transcript58.chr10.nnic	protein_coding	1056799,1072116,1077907,1080011,1080412,1084403,1086286,1093452,1096170,1103599,1105126,1124218,1124910,1129213	1056968,1072293,1078003,1080106,1080476,1084538,1086357,1093496,1096246,1103836,1105267,1124352,1125024,1132170	Gene ID= ENSG00000047056.14 TPM= 3.19 Transcript Type= NA
chr10	1056892	1078232	1056892	1078232	+	transcript72.chr10.nic@WDR37	transcript72.chr10.nic	protein_coding	1056892,1072116,1077907	1056968,1072293,1078232	Gene ID= ENSG00000047056.14 TPM= 2.12 Transcript Type= NA
chr10	1056858	1132170	1056858	1132170	+	ENST00000263150.8@WDR37	ENST00000263150.8	protein_coding	1056858,1072116,1077907,1080011,1080412,1084403,1086286,1093452,1096170,1103602,1105126,1124218,1124910,1129213	1056968,1072293,1078003,1080106,1080476,1084538,1086357,1093496,1096246,1103836,1105267,1124352,1125024,1132170	Gene ID= ENSG00000047056.14 TPM= 28.68 Transcript Type= protein_coding
chr10	3067520	3136802	3067520	3136802	+	ENST00000381125.8@PFKP	ENST00000381125.8	protein_coding	3067520,3082388,3099275,3101365,3103779,3105115,3105393,3107214,3108701,3109355,3112222,3113119,3113372,3116776,3118782,3119892,3129819,3132380,3133203,3134483,3135736,3136450	3067707,3082461,3099352,3101554,3103944,3105159,3105501,3107309,3108793,3109480,3112286,3113188,3113518,3116846,3118869,3120044,3129983,3132441,3133314,3134582,3135838,3136802	Gene ID= ENSG00000067057.16 TPM= 388.01 Transcript Type= protein_coding
chr10	3121795	3124844	3121795	3124844	-	transcript101.chr10.nnic@NA	transcript101.chr10.nnic	NA	3121795	3124844	Gene ID= novel_gene_chr10_102 TPM= 81.79 Transcript Type= NA
chr10	3137728	3172752	3137728	3172752	-	transcript104.chr10.nnic@PITRM1	transcript104.chr10.nnic	protein_coding	3172717,3170104,3166936,3166229,3165413,3165238,3163725,3160204,3159848,3158914,3158040,3157435,3156930,3155591,3151247,3149621,3148171,3147987,3147572,3147150,3145596,3144292,3143389,3140687,3138904,3138235,3137728	3172752,3170206,3167042,3166380,3165483,3165334,3163885,3160330,3159936,3159042,3158153,3157531,3157064,3155729,3151363,3149753,3148291,3148063,3147737,3147250,3145716,3144366,3143501,3140812,3139049,3138337,3138124	Gene ID= ENSG00000107959.15 TPM= 22.49 Transcript Type= NA
chr10	3137730	3172841	3137730	3172841	-	ENST00000380989.6@PITRM1	ENST00000380989.6	protein_coding	3172717,3170104,3166936,3166229,3165413,3165238,3163725,3160204,3159848,3158914,3158040,3157435,3156930,3155591,3151247,3149621,3148168,3147987,3147572,3147150,3145596,3144292,3143389,3140687,3138904,3138235,3137730	3172841,3170206,3167042,3166380,3165527,3165334,3163885,3160330,3159936,3159042,3158153,3157531,3157064,3155729,3151363,3149753,3148291,3148063,3147737,3147250,3145716,3144366,3143501,3140812,3139049,3138337,3138124	Gene ID= ENSG00000107959.15 TPM= 52.76 Transcript Type= protein_coding
chr10	3137728	3172822	3137728	3172822	-	transcript111.chr10.nic@PITRM1	transcript111.chr10.nic	protein_coding	3172717,3170104,3166936,3166229,3165413,3165238,3163725,3160204,3159848,3158914,3158040,3157435,3156930,3155591,3151247,3149621,3147572,3147150,3145596,3144292,3143389,3140687,3138904,3138235,3137728	3172822,3170206,3167042,3166380,3165527,3165334,3163885,3160330,3159936,3159042,3158153,3157531,3157064,3155729,3151363,3149753,3147737,3147250,3145716,3144366,3143501,3140812,3139049,3138337,3138124	Gene ID= ENSG00000107959.15 TPM= 16.11 Transcript Type= NA
chr10	3779047	3785209	3779047	3785209	-	transcript121.chr10.nic@KLF6	transcript121.chr10.nic	protein_coding	3784913,3780106,3779047	3785209,3782214,3779590	Gene ID= ENSG00000067082.14 TPM= 5.31 Transcript Type= NA
chr10	3776552	3779085	3776552	3779085	-	transcript125.chr10.nnic@NA	transcript125.chr10.nnic	NA	3776552	3779085	Gene ID= novel_gene_chr10_126 TPM= 8.5 Transcript Type= NA
chr10	3782042	3784580	3782042	3784580	+	transcript123.chr10.nnic@NA	transcript123.chr10.nnic	NA	3782042	3784580	Gene ID= novel_gene_chr10_124 TPM= 6.37 Transcript Type= NA
chr10	3784327	3785209	3784327	3785209	-	transcript127.chr10.nnic@NA	transcript127.chr10.nnic	NA	3784327	3785209	Gene ID= novel_gene_chr10_128 TPM= 6.37 Transcript Type= NA
chr10	4201141	4243912	4201141	4243912	-	ENST00000608792.1@LINC00702	ENST00000608792.1	lincRNA	4243823,4243504,4201141	4243912,4243687,4207166	Gene ID= ENSG00000233117.2 TPM= 12.75 Transcript Type= lincRNA
chr10	4201141	4243768	4201141	4243768	-	transcript135.chr10.nic@LINC00702	transcript135.chr10.nic	lincRNA	4243504,4201141	4243768,4207166	Gene ID= ENSG00000233117.2 TPM= 24.43 Transcript Type= NA
chr10	4242950	4243789	4242950	4243789	-	ENST00000418372.1@LINC00702	ENST00000418372.1	lincRNA	4243504,4242950	4243789,4243109	Gene ID= ENSG00000233117.2 TPM= 3.19 Transcript Type= lincRNA
chr10	4220089	4222496	4220089	4222496	+	transcript147.chr10.nnic@NA	transcript147.chr10.nnic	NA	4220089	4222496	Gene ID= novel_gene_chr10_148 TPM= 2.12 Transcript Type= NA
chr10	4231329	4231569	4231329	4231569	-	transcript151.chr10.nnic@NA	transcript151.chr10.nnic	NA	4231329	4231569	Gene ID= novel_gene_chr10_152 TPM= 2.12 Transcript Type= NA
chr10	4240665	4243703	4240665	4243703	+	transcript149.chr10.nnic@NA	transcript149.chr10.nnic	NA	4240665	4243703	Gene ID= novel_gene_chr10_150 TPM= 2.12 Transcript Type= NA
chr10	4989789	5004023	4989789	5004023	-	ENST00000460124.5@AKR1C2	ENST00000460124.5	protein_coding	5003752,5001514,4999200,4998625,4995756,4995319,4991831,4989789	5004023,5001681,5000666,4998747,4995865,4995484,4991913,4990038	Gene ID= ENSG00000151632.17 TPM= 1.06 Transcript Type= retained_intron
chr10	5093793	5107686	5093793	5107686	+	ENST00000380554.4@AKR1C3	ENST00000380554.4	protein_coding	5093793,5096410,5097434,5098802,5099327,5102101,5102485,5105595,5107461	5094528,5096577,5097550,5098879,5099449,5102210,5102650,5105677,5107686	Gene ID= ENSG00000196139.13 TPM= 19.12 Transcript Type= protein_coding
chr10	5412551	5458463	5412551	5458463	+	ENST00000355029.8@NET1	ENST00000355029.8	protein_coding	5412551,5426655,5429170,5451830,5452358,5452858,5453250,5453484,5454265,5454948,5456087,5456588	5412820,5426721,5429229,5451937,5452525,5452920,5453346,5453560,5454522,5455118,5456273,5458463	Gene ID= ENSG00000173848.18 TPM= 11.68 Transcript Type= protein_coding
chr10	5446611	5458463	5446611	5458463	+	ENST00000380359.3@NET1	ENST00000380359.3	protein_coding	5446611,5451830,5452358,5452858,5453250,5453484,5454265,5454948,5456087,5456588	5446858,5451937,5452525,5452920,5453346,5453560,5454522,5455118,5456273,5458463	Gene ID= ENSG00000173848.18 TPM= 12.75 Transcript Type= protein_coding
chr10	5638868	5666578	5638868	5666578	-	ENST00000357700.10@ASB13	ENST00000357700.10	protein_coding	5666509,5652863,5651213,5648970,5641770,5638868	5666578,5653050,5651363,5649104,5641961,5640830	Gene ID= ENSG00000196372.12 TPM= 19.12 Transcript Type= protein_coding
chr10	5684838	5763740	5684838	5763740	+	ENST00000328090.9@FAM208B	ENST00000328090.9	protein_coding	5684838,5712823,5717659,5720544,5720755,5720871,5723677,5724430,5726885,5727061,5730487,5735304,5739618,5742097,5746179,5756613,5757520,5758887,5761290,5762532,5763029	5685175,5712918,5717750,5720668,5720774,5720970,5723777,5724533,5726957,5727123,5731203,5735546,5740497,5742526,5750027,5756738,5757673,5758992,5761471,5762646,5763740	Gene ID= ENSG00000108021.19 TPM= 8.5 Transcript Type= protein_coding
chr10	5765223	5813549	5765223	5813549	-	ENST00000380191.8@GDI2	ENST00000380191.8	protein_coding	5813214,5800598,5796763,5794885,5785852,5785142,5773842,5768213,5766494,5766241,5765223	5813549,5800705,5796862,5795019,5786050,5785273,5773941,5768384,5766638,5766295,5766152	Gene ID= ENSG00000057608.16 TPM= 149.76 Transcript Type= protein_coding
chr10	5861617	5889898	5861617	5889898	-	ENST00000380094.9@ANKRD16	ENST00000380094.9	protein_coding	5889041,5887847,5885723,5883969,5883006,5880298,5878097,5861617	5889898,5888067,5885765,5884077,5883167,5880376,5878287,5862691	Gene ID= ENSG00000134461.15 TPM= 1.06 Transcript Type= protein_coding
chr10	5878087	5889871	5878087	5889871	-	ENST00000380092.8@ANKRD16	ENST00000380092.8	protein_coding	5889041,5887847,5885723,5883969,5883006,5880298,5878087	5889871,5888067,5885765,5884077,5883167,5880376,5878287	Gene ID= ENSG00000134461.15 TPM= 4.25 Transcript Type= protein_coding
chr10	5890231	5937593	5890231	5937593	+	ENST00000362091.8@FBXO18	ENST00000362091.8	protein_coding	5890231,5903020,5906037,5908925,5909159,5910938,5913747,5914178,5915403,5916234,5917420,5917590,5918342,5921258,5921448,5923621,5924311,5925367,5927435,5936456,5937110	5890346,5903175,5906632,5909055,5909294,5911128,5913839,5914269,5915571,5916456,5917507,5917676,5918478,5921357,5921569,5923696,5924508,5925492,5927541,5936587,5937593	Gene ID= ENSG00000134452.19 TPM= 58.9 Transcript Type= protein_coding
chr10	5890200	5937593	5890200	5937593	+	transcript211.chr10.nic@FBXO18	transcript211.chr10.nic	protein_coding	5890200,5906037,5908925,5909159,5910938,5913747,5914178,5915403,5916234,5917420,5917590,5918342,5921258,5921448,5923621,5924311,5925367,5927435,5936456,5937110	5890346,5906632,5909055,5909294,5911128,5913839,5914269,5915571,5916456,5917507,5917676,5918478,5921357,5921569,5923696,5924508,5925492,5927541,5936587,5937593	Gene ID= ENSG00000134452.19 TPM= 18 Transcript Type= NA
chr10	5890203	5937594	5890203	5937594	+	ENST00000397269.7@FBXO18	ENST00000397269.7	protein_coding	5890203,5903020,5906037,5908925,5909159,5910938,5913747,5914178,5915403,5916234,5917420,5917590,5918342,5921258,5921448,5923621,5924311,5924751,5925367,5927435,5936456,5937110	5890346,5903175,5906632,5909055,5909294,5911128,5913839,5914269,5915571,5916456,5917507,5917676,5918478,5921357,5921569,5923696,5924508,5924801,5925492,5927541,5936587,5937594	Gene ID= ENSG00000134452.19 TPM= 2.66 Transcript Type= protein_coding
chr10	5952371	5977590	5952371	5977590	-	ENST00000379977.7@IL15RA	ENST00000379977.7	protein_coding	5977405,5966145,5963743,5960367,5959754,5956379,5952371	5977590,5966339,5963841,5960567,5959786,5956454,5953206	Gene ID= ENSG00000134470.20 TPM= 2.12 Transcript Type= protein_coding
chr10	6089062	6105071	6089062	6105071	+	transcript239.chr10.nic@RBM17	transcript239.chr10.nic	protein_coding	6089062,6097048,6101271,6104931	6089193,6097188,6101387,6105071	Gene ID= ENSG00000134453.15 TPM= 6.37 Transcript Type= NA
chr10	6088987	6116880	6088987	6116880	+	ENST00000379888.8@RBM17	ENST00000379888.8	protein_coding	6088987,6097048,6101271,6104931,6106141,6108686,6109986,6112210,6113508,6114049,6115239,6115453	6089193,6097188,6101387,6105097,6106238,6108742,6110127,6112361,6113581,6114147,6115311,6116880	Gene ID= ENSG00000134453.15 TPM= 38.24 Transcript Type= protein_coding
chr10	6202931	6235532	6202931	6235532	+	ENST00000379775.8@PFKFB3	ENST00000379775.8	protein_coding	6202931,6213623,6215221,6216125,6216706,6217135,6219569,6220658,6221381,6221641,6222855,6223958,6224149,6226192,6232895	6203336,6213748,6215317,6216191,6216780,6217191,6219693,6220865,6221527,6221745,6222984,6224020,6224213,6226365,6235532	Gene ID= ENSG00000170525.19 TPM= 5.84 Transcript Type= protein_coding
chr10	6144934	6235532	6144934	6235532	+	ENST00000379789.8@PFKFB3	ENST00000379789.8	protein_coding	6144934,6213623,6215221,6216125,6216706,6217135,6219569,6220658,6221381,6221641,6222855,6223958,6224149,6226192,6232895	6145013,6213748,6215317,6216191,6216780,6217191,6219693,6220865,6221527,6221745,6222984,6224020,6224213,6226365,6235532	Gene ID= ENSG00000170525.19 TPM= 5.84 Transcript Type= protein_coding
chr10	6737382	6739026	6737382	6739026	+	ENST00000417112.1@LINP1	ENST00000417112.1	lincRNA	6737382,6738357	6737628,6739026	Gene ID= ENSG00000223784.1 TPM= 6.37 Transcript Type= lincRNA
chr10	7223806	7228388	7223806	7228388	+	transcript247.chr10.nnic@NA	transcript247.chr10.nnic	NA	7223806	7228388	Gene ID= novel_gene_chr10_248 TPM= 3.19 Transcript Type= NA
chr10	7309542	7317656	7309542	7317656	+	transcript249.chr10.nnic@NA	transcript249.chr10.nnic	NA	7309542	7317656	Gene ID= novel_gene_chr10_250 TPM= 5.31 Transcript Type= NA
chr10	7384147	7386014	7384147	7386014	+	transcript251.chr10.nnic@NA	transcript251.chr10.nnic	NA	7384147	7386014	Gene ID= novel_gene_chr10_252 TPM= 3.19 Transcript Type= NA
chr10	7559270	7666971	7559270	7666971	-	ENST00000397146.6@ITIH5	ENST00000397146.6	protein_coding	7666803,7655631,7641927,7640754,7637228,7617113,7615982,7585901,7579755,7576453,7573142,7569668,7566030,7559270	7666971,7655675,7642090,7640855,7637478,7617282,7616098,7586069,7580064,7577012,7573195,7569784,7566407,7563384	Gene ID= ENSG00000123243.14 TPM= 5.31 Transcript Type= protein_coding
chr10	7769253	7788426	7769253	7788426	-	transcript280.chr10.nic@KIN	transcript280.chr10.nic	protein_coding	7787820,7783081,7780264,7780056,7778838,7775751,7774831,7769253	7788426,7783175,7780307,7780178,7779019,7775799,7774891,7769345	Gene ID= ENSG00000151657.11 TPM= 7.44 Transcript Type= NA
chr10	7788177	7807815	7788177	7807815	+	ENST00000335698.4@ATP5C1	ENST00000335698.4	protein_coding	7788177,7796121,7797047,7798990,7799772,7800027,7802270,7802758,7807659	7788263,7796155,7797178,7799194,7799915,7800091,7802425,7802854,7807815	Gene ID= ENSG00000165629.19 TPM= 1180.68 Transcript Type= protein_coding
chr10	7788129	7807815	7788129	7807815	+	ENST00000356708.11@ATP5C1	ENST00000356708.11	protein_coding	7788129,7796121,7797047,7798990,7799772,7800027,7802270,7802758,7806974,7807659	7788263,7796155,7797178,7799194,7799915,7800091,7802425,7802854,7807010,7807815	Gene ID= ENSG00000165629.19 TPM= 11.24 Transcript Type= protein_coding
chr10	7818504	8016627	7818504	8016627	+	ENST00000344293.5@TAF3	ENST00000344293.5	protein_coding	7818504,7824318,7963920,7977241,8009078,8013731,8014637	7818875,7824560,7965742,7977323,8009330,8013837,8016627	Gene ID= ENSG00000165632.7 TPM= 14.87 Transcript Type= protein_coding
chr10	11017872	11331277	11017872	11331277	+	transcript295.chr10.nic@CELF2	transcript295.chr10.nic	protein_coding	11017872,11165486,11217425,11249153,11257738,11266598,11270666,11275057,11288418,11314139,11321207,11325836,11328926,11330456	11018163,11165682,11217507,11249201,11257872,11266677,11270824,11275120,11288552,11314258,11321386,11325979,11329097,11331277	Gene ID= ENSG00000048740.18 TPM= 27.62 Transcript Type= NA
chr10	11165030	11336675	11165030	11336675	+	ENST00000417956.6@CELF2	ENST00000417956.6	protein_coding	11165030,11165486,11217425,11249153,11257738,11266598,11270666,11275057,11288418,11314139,11321189,11325836,11328926,11330456	11165317,11165682,11217507,11249201,11257872,11266677,11270824,11275120,11288552,11314258,11321386,11325979,11329097,11336675	Gene ID= ENSG00000048740.18 TPM= 8.5 Transcript Type= protein_coding
chr10	11165097	11331277	11165097	11331277	+	transcript308.chr10.nic@CELF2	transcript308.chr10.nic	protein_coding	11165097,11217425,11249153,11257738,11266598,11270666,11275057,11288418,11314139,11321207,11325836,11328926,11330456	11165682,11217507,11249201,11257872,11266677,11270824,11275120,11288552,11314258,11321386,11325979,11329097,11331277	Gene ID= ENSG00000048740.18 TPM= 3.19 Transcript Type= NA
chr10	11018030	11260705	11018030	11260705	+	transcript315.chr10.nic@CELF2	transcript315.chr10.nic	protein_coding	11018030,11165486,11217425,11249153,11257738	11018163,11165682,11217507,11249201,11260705	Gene ID= ENSG00000048740.18 TPM= 2.12 Transcript Type= NA
chr10	11057303	11058083	11057303	11058083	+	transcript323.chr10.nnic@NA	transcript323.chr10.nnic	NA	11057303	11058083	Gene ID= novel_gene_chr10_324 TPM= 2.12 Transcript Type= NA
chr10	11164665	11168665	11164665	11168665	-	transcript327.chr10.nnic@NA	transcript327.chr10.nnic	NA	11164665	11168665	Gene ID= novel_gene_chr10_328 TPM= 3.19 Transcript Type= NA
chr10	11210674	11210962	11210674	11210962	+	transcript321.chr10.nnic@NA	transcript321.chr10.nnic	NA	11210674	11210962	Gene ID= novel_gene_chr10_322 TPM= 2.12 Transcript Type= NA
chr10	11311193	11313746	11311193	11313746	+	transcript325.chr10.nnic@NA	transcript325.chr10.nnic	NA	11311193	11313746	Gene ID= novel_gene_chr10_326 TPM= 2.12 Transcript Type= NA
chr10	11742405	11757902	11742405	11757902	+	transcript343.chr10.nic@ECHDC3	transcript343.chr10.nic	protein_coding	11742405,11747349,11749495,11755408	11742746,11747470,11749592,11757902	Gene ID= ENSG00000134463.14 TPM= 12.75 Transcript Type= NA
chr10	11742342	11764068	11742342	11764068	+	transcript344.chr10.nnic@ECHDC3	transcript344.chr10.nnic	protein_coding	11742342,11747349,11749495,11763224	11742746,11747470,11749592,11764068	Gene ID= ENSG00000134463.14 TPM= 9.03 Transcript Type= NA
chr10	11742366	11764070	11742366	11764070	+	ENST00000379215.8@ECHDC3	ENST00000379215.8	protein_coding	11742366,11747349,11749495,11755408,11763224	11742746,11747470,11749592,11755608,11764070	Gene ID= ENSG00000134463.14 TPM= 124.8 Transcript Type= protein_coding
chr10	12035157	12042888	12035157	12042888	-	transcript356.chr10.nic@UPF2	transcript356.chr10.nic	protein_coding	12042755,12035157	12042888,12035441	Gene ID= ENSG00000151461.19 TPM= 10.62 Transcript Type= NA
chr10	12035232	12042832	12035232	12042832	-	transcript357.chr10.nic@UPF2	transcript357.chr10.nic	protein_coding	12042755,12035232	12042832,12035441	Gene ID= ENSG00000151461.19 TPM= 3.19 Transcript Type= NA
chr10	12035355	12042832	12035355	12042832	-	transcript358.chr10.nic@UPF2	transcript358.chr10.nic	protein_coding	12042755,12035355	12042832,12035441	Gene ID= ENSG00000151461.19 TPM= 3.19 Transcript Type= NA
chr10	11920022	12042834	11920022	12042834	-	ENST00000357604.9@UPF2	ENST00000357604.9	protein_coding	12042755,12035059,12028745,12014024,12004530,12001676,11999906,11997672,11979057,11967341,11964009,11959171,11956320,11955232,11952066,11948369,11943064,11942665,11936545,11931641,11929865,11920022	12042834,12035441,12029524,12014184,12004727,12001825,12000009,11997757,11979165,11967454,11964125,11959356,11956523,11955507,11952249,11948508,11943168,11942763,11936712,11931782,11929985,11921307	Gene ID= ENSG00000151461.19 TPM= 9.56 Transcript Type= protein_coding
chr10	12068926	12123590	12068926	12123590	+	transcript359.chr10.nnic@DHTKD1	transcript359.chr10.nnic	protein_coding	12068926,12081472,12084540,12087535,12088986,12091513,12094073,12097684,12100178,12101042,12106246,12107909,12112900,12117673,12118749,12120182,12120787,12123570	12069187,12081627,12084751,12087729,12089255,12091684,12094271,12097996,12100262,12101181,12106396,12108015,12113064,12117755,12118918,12120267,12121191,12123590	Gene ID= ENSG00000181192.11 TPM= 2.12 Transcript Type= NA
chr10	12068926	12121238	12068926	12121238	+	transcript361.chr10.nnic@DHTKD1	transcript361.chr10.nnic	protein_coding	12068926,12081472,12084540,12087535,12088986,12091513,12094073,12097684,12100178,12101042,12106246,12107909,12117673,12118749,12120182,12120787	12069187,12081627,12084751,12087729,12089255,12091684,12094271,12097996,12100262,12101181,12106396,12108015,12117755,12118918,12120267,12121238	Gene ID= ENSG00000181192.11 TPM= 4.25 Transcript Type= NA
chr10	12068972	12123225	12068972	12123225	+	ENST00000263035.8@DHTKD1	ENST00000263035.8	protein_coding	12068972,12081472,12084540,12087535,12088986,12091513,12094073,12097684,12100178,12101042,12106246,12107909,12112900,12117673,12118749,12120182,12120787	12069187,12081627,12084751,12087729,12089255,12091684,12094271,12097996,12100262,12101181,12106396,12108015,12113064,12117755,12118918,12120267,12123225	Gene ID= ENSG00000181192.11 TPM= 8.5 Transcript Type= protein_coding
chr10	12129699	12164827	12129699	12164827	+	ENST00000298428.13@SEC61A2	ENST00000298428.13	protein_coding	12129699,12133241,12136105,12143117,12149595,12149852,12155778,12156907,12157908,12160930,12162213,12164268	12129794,12133308,12136170,12143195,12149726,12149961,12155931,12157067,12158105,12161121,12162289,12164827	Gene ID= ENSG00000065665.20 TPM= 9.56 Transcript Type= protein_coding
chr10	12165325	12196124	12165325	12196124	-	ENST00000491614.5@NUDT5	ENST00000491614.5	protein_coding	12195770,12186229,12184889,12179083,12177793,12173718,12172765,12170900,12170717,12165325	12196124,12186332,12184956,12179132,12177900,12173813,12172866,12170908,12170770,12167811	Gene ID= ENSG00000165609.12 TPM= 2.12 Transcript Type= protein_coding
chr10	12167577	12196144	12167577	12196144	-	ENST00000537776.5@NUDT5	ENST00000537776.5	protein_coding	12195770,12186229,12184889,12179083,12177793,12173718,12172769,12170900,12170717,12167577	12196144,12186332,12184956,12179132,12177900,12173813,12172866,12170912,12170770,12167811	Gene ID= ENSG00000165609.12 TPM= 7.44 Transcript Type= protein_coding
chr10	12195966	12250588	12195966	12250588	+	ENST00000281141.8@CDC123	ENST00000281141.8	protein_coding	12195966,12198705,12209967,12210290,12215740,12217361,12230948,12235048,12237144,12238457,12246149,12249581,12250311	12196319,12198776,12210024,12210322,12215835,12217467,12230996,12235123,12237266,12238485,12246277,12249718,12250588	Gene ID= ENSG00000151465.13 TPM= 84.97 Transcript Type= protein_coding
chr10	12896625	13001697	12896625	13001697	-	ENST00000378825.4@CCDC3	ENST00000378825.4	protein_coding	13001197,12998338,12896625	13001697,12998512,12898679	Gene ID= ENSG00000151468.10 TPM= 3.19 Transcript Type= protein_coding
chr10	13100169	13138308	13100169	13138308	+	ENST00000378757.6@OPTN	ENST00000378757.6	protein_coding	13100169,13109112,13110274,13112453,13116267,13118888,13122385,13123995,13125418,13125946,13127745,13132067,13133502,13136745	13100302,13109288,13110476,13112635,13116340,13119040,13122487,13124110,13125567,13126039,13127903,13132197,13133581,13138308	Gene ID= ENSG00000123240.16 TPM= 13.1 Transcript Type= protein_coding
chr10	13100225	13138291	13100225	13138291	+	ENST00000378747.7@OPTN	ENST00000378747.7	protein_coding	13100225,13108138,13109112,13110274,13112453,13116267,13118888,13122385,13123995,13125418,13125946,13127745,13132067,13133502,13136745	13100302,13108289,13109288,13110476,13112635,13116340,13119040,13122487,13124110,13125567,13126039,13127903,13132197,13133581,13138291	Gene ID= ENSG00000123240.16 TPM= 5.66 Transcript Type= protein_coding
chr10	13277800	13300064	13277800	13300064	-	transcript439.chr10.nnic@PHYH	transcript439.chr10.nnic	protein_coding	13299968,13298187,13295496,13294428,13283690,13280976,13277800	13300064,13298245,13295606,13294596,13283839,13281110,13278354	Gene ID= ENSG00000107537.13 TPM= 10.09 Transcript Type= NA
chr10	13277800	13300101	13277800	13300101	-	ENST00000263038.8@PHYH	ENST00000263038.8	protein_coding	13299968,13298187,13295496,13294428,13291831,13288360,13283690,13280976,13277800	13300101,13298245,13295606,13294596,13291912,13288541,13283839,13281110,13278354	Gene ID= ENSG00000107537.13 TPM= 168.35 Transcript Type= protein_coding
chr10	13317439	13347736	13317439	13347736	-	transcript442.chr10.nic@SEPHS1	transcript442.chr10.nic	protein_coding	13347277,13344758,13338705,13336243,13333817,13329698,13328351,13322835,13317439	13347736,13345028,13338808,13336350,13333971,13329788,13328450,13323047,13319356	Gene ID= ENSG00000086475.14 TPM= 13.1 Transcript Type= NA
chr10	13317424	13348297	13317424	13348297	-	ENST00000327347.9@SEPHS1	ENST00000327347.9	protein_coding	13348000,13344758,13338705,13336243,13333817,13329698,13328351,13322835,13317424	13348297,13345028,13338808,13336350,13333971,13329788,13328450,13323047,13319356	Gene ID= ENSG00000086475.14 TPM= 6.72 Transcript Type= protein_coding
chr10	13317439	13348298	13317439	13348298	-	ENST00000545675.5@SEPHS1	ENST00000545675.5	protein_coding	13348000,13338705,13336243,13333817,13329698,13328351,13322835,13317439	13348298,13338808,13336350,13333971,13329788,13328450,13323047,13319356	Gene ID= ENSG00000086475.14 TPM= 1.41 Transcript Type= protein_coding
chr10	13318080	13348280	13318080	13348280	-	ENST00000378614.8@SEPHS1	ENST00000378614.8	protein_coding	13348000,13344758,13338705,13336243,13333817,13329698,13328351,13318080	13348280,13345028,13338808,13336350,13333971,13329788,13328450,13319356	Gene ID= ENSG00000086475.14 TPM= 1.06 Transcript Type= protein_coding
chr10	13586927	13630868	13586927	13630868	+	ENST00000378572.7@PRPF18	ENST00000378572.7	protein_coding	13586927,13597458,13600244,13605631,13610039,13611615,13613741,13614015,13616398,13630260	13587152,13597535,13600348,13605744,13610185,13611683,13613881,13614086,13616553,13630868	Gene ID= ENSG00000165630.13 TPM= 12.75 Transcript Type= protein_coding
chr10	13638301	13640568	13638301	13640568	-	transcript467.chr10.nnic@NA	transcript467.chr10.nnic	NA	13638301	13640568	Gene ID= novel_gene_chr10_468 TPM= 9.56 Transcript Type= NA
chr10	13692169	13707757	13692169	13707757	-	ENST00000492155.5@FRMD4A	ENST00000492155.5	protein_coding	13707037,13701340,13692169	13707757,13701478,13694039	Gene ID= ENSG00000151474.21 TPM= 2.12 Transcript Type= retained_intron
chr10	13700112	13707562	13700112	13707562	-	transcript472.chr10.nic@FRMD4A	transcript472.chr10.nic	protein_coding	13707037,13700112	13707562,13701478	Gene ID= ENSG00000151474.21 TPM= 2.12 Transcript Type= NA
chr10	13700821	13707562	13700821	13707562	-	transcript473.chr10.nic@FRMD4A	transcript473.chr10.nic	protein_coding	13707037,13700821	13707562,13701478	Gene ID= ENSG00000151474.21 TPM= 2.12 Transcript Type= NA
chr10	13646334	13657123	13646334	13657123	-	ENST00000495956.2@FRMD4A	ENST00000495956.2	protein_coding	13656636,13654416,13646334	13657123,13654512,13647035	Gene ID= ENSG00000151474.21 TPM= 1.06 Transcript Type= protein_coding
chr10	14519513	14604418	14519513	14604418	-	ENST00000378467.8@FAM107B	ENST00000378467.8	protein_coding	14604240,14553322,14530332,14521869,14519513	14604418,14553387,14530515,14522019,14521306	Gene ID= ENSG00000065809.13 TPM= 1.06 Transcript Type= protein_coding
chr10	14838164	14871741	14838164	14871741	+	ENST00000378372.7@HSPA14	ENST00000378372.7	protein_coding	14838164,14839905,14840075,14848609,14848790,14849721,14851219,14852370,14854125,14855841,14867083,14867736,14870597,14871528	14838459,14839985,14840157,14848657,14848895,14849811,14851323,14852531,14854280,14855943,14867295,14867909,14870667,14871741	Gene ID= ENSG00000187522.14 TPM= 16.99 Transcript Type= protein_coding
chr10	14838302	14844737	14838302	14844737	+	ENST00000437161.6@HSPA14	ENST00000437161.6	protein_coding	14838302,14839905,14840075,14843371	14838459,14839985,14840157,14844737	Gene ID= ENSG00000187522.14 TPM= 1.06 Transcript Type= protein_coding
chr10	14838166	14844727	14838166	14844727	+	ENST00000640019.1@AC069544.2	ENST00000640019.1	protein_coding	14838166,14839905,14840075,14842134,14843371	14838459,14839985,14840157,14842846,14844727	Gene ID= ENSG00000284024.1 TPM= 5.31 Transcript Type= protein_coding
chr10	14877688	14878686	14877688	14878686	-	ENST00000609399.1@AC069544.1	ENST00000609399.1	lincRNA	14877688	14878686	Gene ID= ENSG00000272853.1 TPM= 1.06 Transcript Type= lincRNA
chr10	14878820	14904315	14878820	14904315	+	ENST00000378331.5@SUV39H2	ENST00000378331.5	protein_coding	14878820,14896846,14899539,14901133,14902406	14878919,14897517,14899685,14901262,14904315	Gene ID= ENSG00000152455.15 TPM= 1.06 Transcript Type= nonsense_mediated_decay
chr10	14898203	14954096	14898203	14954096	-	transcript490.chr10.nnic@DCLRE1C	transcript490.chr10.nnic	protein_coding	14953902,14949036,14945105,14939810,14936538,14935463,14934703,14934380,14932854,14928016,14926843,14922981,14919738,14908705,14898203	14954096,14949087,14945189,14939869,14936593,14935564,14934775,14934520,14932955,14928152,14926897,14923069,14919832,14909330,14899312	Gene ID= ENSG00000152457.17 TPM= 3.19 Transcript Type= NA
chr10	14908171	14954048	14908171	14954048	-	ENST00000378278.6@DCLRE1C	ENST00000378278.6	protein_coding	14953902,14949036,14945105,14939810,14936538,14935463,14934703,14934380,14932854,14928016,14926843,14922981,14919738,14908171	14954048,14949087,14945189,14939869,14936593,14935564,14934775,14934520,14932955,14928152,14926897,14923069,14919832,14909330	Gene ID= ENSG00000152457.17 TPM= 6.37 Transcript Type= protein_coding
chr10	15097180	15104254	15097180	15104254	+	ENST00000616640.1@RPP38	ENST00000616640.1	protein_coding	15097180,15103305	15097766,15104254	Gene ID= ENSG00000152464.14 TPM= 1.41 Transcript Type= protein_coding
chr10	15097331	15104255	15097331	15104255	+	ENST00000378202.5@RPP38	ENST00000378202.5	protein_coding	15097331,15103305	15097409,15104255	Gene ID= ENSG00000152464.14 TPM= 2.47 Transcript Type= protein_coding
chr10	15097382	15104257	15097382	15104257	+	ENST00000378197.4@RPP38	ENST00000378197.4	protein_coding	15097382,15102218,15103305	15097766,15102336,15104257	Gene ID= ENSG00000152464.14 TPM= 3.54 Transcript Type= protein_coding
chr10	15098839	15100762	15098839	15100762	-	transcript517.chr10.nnic@NA	transcript517.chr10.nnic	NA	15098839	15100762	Gene ID= novel_gene_chr10_518 TPM= 2.12 Transcript Type= NA
chr10	15141511	15168703	15141511	15168703	-	transcript516.chr10.nic@NMT2	transcript516.chr10.nic	protein_coding	15168503,15141511	15168703,15141557	Gene ID= ENSG00000152465.17 TPM= 3.19 Transcript Type= NA
chr10	15211643	15371059	15211643	15371059	-	ENST00000378116.8@FAM171A1	ENST00000378116.8	protein_coding	15370956,15283878,15275855,15254721,15248639,15220944,15215996,15211643	15371059,15284105,15275947,15254879,15248815,15221060,15216110,15214601	Gene ID= ENSG00000148468.16 TPM= 7.44 Transcript Type= protein_coding
chr10	15513949	15720125	15513949	15720125	-	ENST00000378076.3@ITGA8	ENST00000378076.3	protein_coding	15719563,15718766,15687938,15684004,15678722,15677592,15672624,15671603,15660879,15658999,15655354,15646846,15644030,15616514,15613660,15608235,15607677,15606285,15605724,15604208,15597207,15592225,15586584,15575489,15572211,15558074,15548455,15531050,15519290,15513949	15720125,15718899,15688038,15684127,15678783,15677637,15672749,15671647,15660922,15659055,15655406,15647051,15644221,15616559,15613767,15608290,15607831,15606422,15605791,15604355,15597299,15592304,15586664,15575594,15572369,15558202,15548568,15531151,15519412,15517244	Gene ID= ENSG00000077943.7 TPM= 5.31 Transcript Type= protein_coding
chr10	15778170	15860520	15778170	15860520	-	ENST00000277632.7@MINDY3	ENST00000277632.7	protein_coding	15860206,15847864,15843212,15841426,15838228,15837204,15834543,15833630,15821656,15816835,15796100,15789247,15786561,15782155,15778170	15860520,15847943,15843272,15841599,15838279,15837318,15834616,15833709,15821726,15816915,15796172,15789319,15786648,15782226,15779141	Gene ID= ENSG00000148481.13 TPM= 10.09 Transcript Type= protein_coding
chr10	15778170	15860498	15778170	15860498	-	ENST00000477891.1@MINDY3	ENST00000477891.1	protein_coding	15860206,15847864,15843212,15841426,15837204,15834543,15833630,15821656,15816835,15796100,15789247,15786561,15782155,15778170	15860498,15847943,15843272,15841599,15837318,15834616,15833709,15821726,15816915,15796172,15789319,15786648,15782226,15779141	Gene ID= ENSG00000148481.13 TPM= 10.09 Transcript Type= processed_transcript
chr10	16440069	16443420	16440069	16443420	-	transcript543.chr10.nnic@NA	transcript543.chr10.nnic	NA	16440069	16443420	Gene ID= novel_gene_chr10_544 TPM= 2.12 Transcript Type= NA
chr10	16590611	16817528	16590611	16817528	-	ENST00000345264.9@RSU1	ENST00000345264.9	protein_coding	16817315,16816973,16782034,16764390,16754871,16752918,16752539,16695023,16590611	16817528,16817084,16782084,16764510,16754989,16753000,16752653,16695155,16593496	Gene ID= ENSG00000148484.17 TPM= 35.05 Transcript Type= protein_coding
chr10	16714040	16718111	16714040	16718111	+	transcript561.chr10.nnic@NA	transcript561.chr10.nnic	NA	16714040	16718111	Gene ID= novel_gene_chr10_562 TPM= 4.25 Transcript Type= NA
chr10	17146737	17201682	17146737	17201682	-	ENST00000377799.7@TRDMT1	ENST00000377799.7	protein_coding	17201571,17174551,17168841,17162166,17161483,17160305,17159146,17157441,17154677,17153507,17146737	17201682,17174660,17168917,17162237,17161548,17160374,17159229,17157784,17154734,17153636,17149140	Gene ID= ENSG00000107614.21 TPM= 1.06 Transcript Type= protein_coding
chr10	17229278	17237593	17229278	17237593	+	ENST00000487938.5@VIM	ENST00000487938.5	protein_coding	17229278,17230650,17233587,17233770,17234693,17235169,17235846,17237230	17229985,17230710,17233682,17233931,17234818,17235389,17236379,17237593	Gene ID= ENSG00000026025.15 TPM= 3.72 Transcript Type= nonsense_mediated_decay
chr10	17229278	17237593	17229278	17237593	+	ENST00000224237.9@VIM	ENST00000224237.9	protein_coding	17229278,17230650,17233587,17233770,17234693,17235169,17235846,17236294,17237230	17229985,17230710,17233682,17233931,17234818,17235389,17235889,17236379,17237593	Gene ID= ENSG00000026025.15 TPM= 326.61 Transcript Type= protein_coding
chr10	17454170	17455498	17454170	17455498	+	transcript595.chr10.nnic@NA	transcript595.chr10.nnic	NA	17454170	17455498	Gene ID= novel_gene_chr10_596 TPM= 6.37 Transcript Type= NA
chr10	17589032	17617377	17589032	17617377	-	ENST00000361271.7@HACD1	ENST00000361271.7	protein_coding	17617083,17603930,17603726,17603560,17599290,17594205,17589032	17617377,17604047,17603744,17603648,17599411,17594383,17590446	Gene ID= ENSG00000165996.13 TPM= 10.62 Transcript Type= protein_coding
chr10	17615477	17617367	17615477	17617367	-	ENST00000326961.6@HACD1	ENST00000326961.6	protein_coding	17617083,17615477	17617367,17615964	Gene ID= ENSG00000165996.13 TPM= 9.56 Transcript Type= protein_coding
chr10	17598364	17601320	17598364	17601320	-	transcript629.chr10.nnic@NA	transcript629.chr10.nnic	NA	17598364	17601320	Gene ID= novel_gene_chr10_630 TPM= 3.19 Transcript Type= NA
chr10	17644202	17715914	17644202	17715914	+	transcript632.chr10.nnic@STAM	transcript632.chr10.nnic	protein_coding	17644202,17660464,17680900,17684675,17684832,17688027,17693222,17695049,17696775,17700191,17704431,17704970,17705588,17708776,17714543	17644379,17660548,17681011,17684750,17684927,17688173,17693312,17695241,17696869,17700279,17704518,17705024,17705741,17708951,17715914	Gene ID= ENSG00000136738.14 TPM= 9.03 Transcript Type= NA
chr10	17644125	17715914	17644125	17715914	+	ENST00000377524.7@STAM	ENST00000377524.7	protein_coding	17644125,17660464,17684675,17684832,17688027,17693222,17695049,17696775,17700191,17704431,17704970,17705588,17708776,17714543	17644379,17660548,17684750,17684927,17688173,17693312,17695241,17696869,17700279,17704518,17705024,17705741,17708951,17715914	Gene ID= ENSG00000136738.14 TPM= 32.4 Transcript Type= protein_coding
chr10	17669886	17673170	17669886	17673170	-	transcript642.chr10.nnic@NA	transcript642.chr10.nnic	NA	17669886	17673170	Gene ID= novel_gene_chr10_643 TPM= 2.12 Transcript Type= NA
chr10	17707881	17708857	17707881	17708857	-	transcript644.chr10.nnic@NA	transcript644.chr10.nnic	NA	17707881	17708857	Gene ID= novel_gene_chr10_645 TPM= 2.12 Transcript Type= NA
chr10	17712785	17713369	17712785	17713369	-	transcript646.chr10.nnic@NA	transcript646.chr10.nnic	NA	17712785	17713369	Gene ID= novel_gene_chr10_647 TPM= 5.31 Transcript Type= NA
chr10	18140391	18152738	18140391	18152738	+	transcript651.chr10.nic@CACNB2	transcript651.chr10.nic	protein_coding	18140391,18150883	18141215,18152738	Gene ID= ENSG00000165995.18 TPM= 3.19 Transcript Type= NA
chr10	18172926	18174626	18172926	18174626	-	transcript652.chr10.nnic@NA	transcript652.chr10.nnic	NA	18172926	18174626	Gene ID= novel_gene_chr10_653 TPM= 8.5 Transcript Type= NA
chr10	18386401	18387982	18386401	18387982	-	transcript661.chr10.nnic@NA	transcript661.chr10.nnic	NA	18386401	18387982	Gene ID= novel_gene_chr10_662 TPM= 2.12 Transcript Type= NA
chr10	18438185	18441096	18438185	18441096	-	transcript659.chr10.nnic@NA	transcript659.chr10.nnic	NA	18438185	18441096	Gene ID= novel_gene_chr10_660 TPM= 6.37 Transcript Type= NA
chr10	18544402	18545879	18544402	18545879	+	transcript672.chr10.nnic@NA	transcript672.chr10.nnic	NA	18544402	18545879	Gene ID= novel_gene_chr10_673 TPM= 2.12 Transcript Type= NA
chr10	18545561	18651622	18545561	18651622	-	ENST00000377304.6@NSUN6	ENST00000377304.6	protein_coding	18651129,18648490,18642476,18616184,18614460,18609845,18596208,18585949,18551823,18548112,18545561	18651622,18648645,18642555,18616293,18614613,18609926,18596327,18586093,18551971,18548237,18546145	Gene ID= ENSG00000241058.3 TPM= 7.44 Transcript Type= protein_coding
chr10	19721588	19728550	19721588	19728550	-	ENST00000431157.6@AL157895.1	ENST00000431157.6	antisense_RNA	19728405,19724927,19722330,19721588	19728550,19724981,19722422,19722225	Gene ID= ENSG00000233968.6 TPM= 1.06 Transcript Type= antisense_RNA
chr10	19991349	19993012	19991349	19993012	-	transcript687.chr10.nnic@NA	transcript687.chr10.nnic	NA	19991349	19993012	Gene ID= novel_gene_chr10_688 TPM= 2.12 Transcript Type= NA
chr10	20286850	20289033	20286850	20289033	+	transcript689.chr10.nnic@NA	transcript689.chr10.nnic	NA	20286850	20289033	Gene ID= novel_gene_chr10_690 TPM= 3.19 Transcript Type= NA
chr10	20779973	20897602	20779973	20897602	-	ENST00000377122.8@NEBL	ENST00000377122.8	protein_coding	20897125,20896958,20889845,20888097,20880794,20869740,20868664,20859713,20858240,20852545,20850395,20845258,20840739,20835513,20831473,20831196,20828530,20826447,20823208,20819424,20817600,20815625,20813939,20812769,20809806,20808510,20787202,20779973	20897602,20897029,20889949,20888207,20880904,20869841,20868765,20859826,20858344,20852649,20850502,20845368,20840849,20835623,20831583,20831306,20828634,20826539,20823300,20819516,20817692,20815717,20814043,20812940,20809898,20808659,20787308,20785923	Gene ID= ENSG00000078114.18 TPM= 21.24 Transcript Type= protein_coding
chr10	20792227	20796392	20792227	20796392	+	transcript726.chr10.nnic@NA	transcript726.chr10.nnic	NA	20792227	20796392	Gene ID= novel_gene_chr10_727 TPM= 28.68 Transcript Type= NA
chr10	20798240	20801286	20798240	20801286	+	transcript732.chr10.nnic@NA	transcript732.chr10.nnic	NA	20798240	20801286	Gene ID= novel_gene_chr10_733 TPM= 4.25 Transcript Type= NA
chr10	20802884	20805864	20802884	20805864	+	transcript712.chr10.nnic@NA	transcript712.chr10.nnic	NA	20802884	20805864	Gene ID= novel_gene_chr10_713 TPM= 7.44 Transcript Type= NA
chr10	20804285	20808360	20804285	20808360	+	transcript716.chr10.nnic@NA	transcript716.chr10.nnic	NA	20804285	20808360	Gene ID= novel_gene_chr10_717 TPM= 7.44 Transcript Type= NA
chr10	20808306	20809964	20808306	20809964	+	transcript728.chr10.nnic@NA	transcript728.chr10.nnic	NA	20808306	20809964	Gene ID= novel_gene_chr10_729 TPM= 14.87 Transcript Type= NA
chr10	20808307	20808706	20808307	20808706	+	transcript720.chr10.nnic@NA	transcript720.chr10.nnic	NA	20808307	20808706	Gene ID= novel_gene_chr10_721 TPM= 3.19 Transcript Type= NA
chr10	20810768	20814458	20810768	20814458	+	transcript722.chr10.nnic@NA	transcript722.chr10.nnic	NA	20810768	20814458	Gene ID= novel_gene_chr10_723 TPM= 4.25 Transcript Type= NA
chr10	20828694	20830933	20828694	20830933	+	transcript714.chr10.nnic@NA	transcript714.chr10.nnic	NA	20828694	20830933	Gene ID= novel_gene_chr10_715 TPM= 63.73 Transcript Type= NA
chr10	20868727	20870343	20868727	20870343	+	transcript724.chr10.nnic@NA	transcript724.chr10.nnic	NA	20868727	20870343	Gene ID= novel_gene_chr10_725 TPM= 19.12 Transcript Type= NA
chr10	20872205	20874885	20872205	20874885	+	transcript730.chr10.nnic@NA	transcript730.chr10.nnic	NA	20872205	20874885	Gene ID= novel_gene_chr10_731 TPM= 4.25 Transcript Type= NA
chr10	20874743	20879398	20874743	20879398	-	transcript740.chr10.nnic@NA	transcript740.chr10.nnic	NA	20874743	20879398	Gene ID= novel_gene_chr10_741 TPM= 5.31 Transcript Type= NA
chr10	20891127	20894767	20891127	20894767	+	transcript718.chr10.nnic@NA	transcript718.chr10.nnic	NA	20891127	20894767	Gene ID= novel_gene_chr10_719 TPM= 58.42 Transcript Type= NA
chr10	21494490	21497295	21494490	21497295	-	transcript743.chr10.nnic@NA	transcript743.chr10.nnic	NA	21494490	21497295	Gene ID= novel_gene_chr10_744 TPM= 2.12 Transcript Type= NA
chr10	21534173	21743630	21534173	21743630	+	ENST00000377072.7@MLLT10	ENST00000377072.7	protein_coding	21534173,21534645,21538833,21586294,21595331,21612348,21614831,21617112,21651673,21670449,21673350,21681332,21682225,21688491,21713772,21726244,21727856,21730900,21732899,21733504,21733768,21735139,21740154,21741939	21534520,21534804,21538912,21586348,21595440,21612451,21614924,21617207,21651768,21670704,21673919,21681376,21682257,21688538,21713950,21726355,21727928,21731054,21733087,21733592,21734129,21735235,21740236,21743630	Gene ID= ENSG00000078403.16 TPM= 5.31 Transcript Type= protein_coding
chr10	21622155	21624341	21622155	21624341	-	transcript754.chr10.nnic@NA	transcript754.chr10.nnic	NA	21622155	21624341	Gene ID= novel_gene_chr10_755 TPM= 6.37 Transcript Type= NA
chr10	21756536	21758392	21756536	21758392	-	transcript762.chr10.nnic@NA	transcript762.chr10.nnic	NA	21756536	21758392	Gene ID= novel_gene_chr10_763 TPM= 2.12 Transcript Type= NA
chr10	21919889	22003755	21919889	22003755	-	transcript759.chr10.nic@DNAJC1	transcript759.chr10.nic	protein_coding	22003213,21929040,21928506,21920798,21919889	22003755,21929141,21928552,21920963,21919929	Gene ID= ENSG00000136770.10 TPM= 5.31 Transcript Type= NA
chr10	21756537	22003725	21756537	22003725	-	ENST00000376980.7@DNAJC1	ENST00000376980.7	protein_coding	22003213,21929040,21928506,21920798,21919832,21918779,21904522,21882282,21805980,21766261,21759170,21756537	22003725,21929141,21928552,21920963,21919929,21918872,21904612,21882439,21806099,21766309,21759618,21756755	Gene ID= ENSG00000136770.10 TPM= 11.68 Transcript Type= protein_coding
chr10	22252072	22254589	22252072	22254589	+	ENST00000623583.1@AL158211.5	ENST00000623583.1	TEC	22252072	22254589	Gene ID= ENSG00000279631.1 TPM= 2.12 Transcript Type= TEC
chr10	22315974	22320308	22315974	22320308	+	ENST00000376836.7@COMMD3	ENST00000376836.7	protein_coding	22315974,22317884,22318105,22318272,22318653,22318806,22318959,22319939	22316556,22317995,22318168,22318306,22318713,22318862,22319018,22320308	Gene ID= ENSG00000148444.15 TPM= 93.82 Transcript Type= protein_coding
chr10	22316399	22319281	22316399	22319281	+	ENST00000468179.6@COMMD3	ENST00000468179.6	protein_coding	22316399,22317884,22318105,22318272	22316556,22317995,22318168,22319281	Gene ID= ENSG00000148444.15 TPM= 1.06 Transcript Type= retained_intron
chr10	22316420	22320287	22316420	22320287	+	ENST00000444869.5@COMMD3	ENST00000444869.5	protein_coding	22316420,22317884,22318105,22318272,22318959,22319939	22316556,22317995,22318168,22318306,22319018,22320287	Gene ID= ENSG00000148444.15 TPM= 3.19 Transcript Type= protein_coding
chr10	22316441	22320306	22316441	22320306	+	ENST00000463688.6@COMMD3	ENST00000463688.6	protein_coding	22316441,22317884,22318105,22318272,22319939	22316556,22317995,22318168,22319018,22320306	Gene ID= ENSG00000148444.15 TPM= 2.47 Transcript Type= retained_intron
chr10	22319493	22321006	22319493	22321006	-	transcript773.chr10.nnic@NA	transcript773.chr10.nnic	NA	22319493	22321006	Gene ID= novel_gene_chr10_774 TPM= 2.47 Transcript Type= NA
chr10	22321800	22331254	22321800	22331254	+	transcript779.chr10.nic@BMI1	transcript779.chr10.nic	protein_coding	22321800,22326431,22326890,22327595,22327742,22327950,22328134,22328600,22329048,22329213	22322170,22326561,22326986,22327650,22327792,22328058,22328179,22328698,22329128,22331254	Gene ID= ENSG00000168283.13 TPM= 2.12 Transcript Type= NA
chr10	22321211	22331484	22321211	22331484	+	ENST00000376663.7@BMI1	ENST00000376663.7	protein_coding	22321211,22326431,22326890,22327595,22327742,22327950,22328134,22328600,22329048,22329213	22321696,22326561,22326986,22327650,22327792,22328058,22328179,22328698,22329128,22331484	Gene ID= ENSG00000168283.13 TPM= 13.81 Transcript Type= protein_coding
chr10	22435431	22437834	22435431	22437834	-	transcript784.chr10.nnic@NA	transcript784.chr10.nnic	NA	22435431	22437834	Gene ID= novel_gene_chr10_785 TPM= 5.31 Transcript Type= NA
chr10	23095506	23122013	23095506	23122013	+	ENST00000376510.7@MSRB2	ENST00000376510.7	protein_coding	23095506,23104144,23110242,23119304,23120758	23095726,23104244,23110318,23119451,23122013	Gene ID= ENSG00000148450.12 TPM= 240.05 Transcript Type= protein_coding
chr10	23096411	23103049	23096411	23103049	+	transcript807.chr10.nnic@NA	transcript807.chr10.nnic	NA	23096411	23103049	Gene ID= novel_gene_chr10_808 TPM= 2.12 Transcript Type= NA
chr10	23192327	23194252	23192327	23194252	+	ENST00000376504.3@PTF1A	ENST00000376504.3	protein_coding	23192327,23193704	23193314,23194252	Gene ID= ENSG00000168267.6 TPM= 1.06 Transcript Type= protein_coding
chr10	23439458	23442390	23439458	23442390	+	ENST00000376495.4@OTUD1	ENST00000376495.4	protein_coding	23439458	23442390	Gene ID= ENSG00000165312.6 TPM= 16.99 Transcript Type= protein_coding
chr10	24209164	24547843	24209164	24547843	+	ENST00000376454.7@KIAA1217	ENST00000376454.7	protein_coding	24209164,24219626,24380869,24432995,24438386,24473228,24494500,24495147,24501379,24513259,24520123,24521782,24524323,24527936,24531830,24533070,24536774,24542693,24542883,24544981,24545827	24209263,24219909,24381067,24433193,24438479,24474060,24494604,24495196,24501545,24513434,24520253,24521929,24524764,24528119,24531993,24533237,24536893,24542770,24544481,24545103,24547843	Gene ID= ENSG00000120549.17 TPM= 3.19 Transcript Type= protein_coding
chr10	24629524	24723969	24629524	24723969	-	transcript824.chr10.nic@ARHGAP21	transcript824.chr10.nic	protein_coding	24723562,24721837,24670218,24666985,24635011,24633402,24629996,24629524	24723969,24722279,24670397,24667009,24635103,24633480,24630050,24629862	Gene ID= ENSG00000107863.17 TPM= 2.12 Transcript Type= NA
chr10	24629014	24723219	24629014	24723219	-	transcript825.chr10.nic@ARHGAP21	transcript825.chr10.nic	protein_coding	24723157,24721837,24670218,24666985,24635011,24633402,24629014	24723219,24722279,24670397,24667009,24635103,24633480,24630050	Gene ID= ENSG00000107863.17 TPM= 2.12 Transcript Type= NA
chr10	24848607	24952604	24848607	24952604	-	ENST00000320152.10@PRTFDC1	ENST00000320152.10	protein_coding	24952528,24942330,24937184,24871998,24858392,24856913,24855318,24851388,24848607	24952604,24942436,24937367,24872063,24858409,24856995,24855364,24851464,24849891	Gene ID= ENSG00000099256.18 TPM= 5.31 Transcript Type= protein_coding
chr10	25016658	25026664	25016658	25026664	+	ENST00000524413.5@THNSL1	ENST00000524413.5	protein_coding	25016658,25021742,25023176	25016789,25021908,25026664	Gene ID= ENSG00000185875.12 TPM= 6.37 Transcript Type= protein_coding
chr10	26697659	26746798	26697659	26746798	+	ENST00000376215.9@PDSS1	ENST00000376215.9	protein_coding	26697659,26702162,26704677,26705286,26709638,26720218,26723806,26724014,26735240,26735466,26742497,26746333	26697840,26702194,26704741,26705394,26709768,26720359,26723917,26724123,26735320,26735579,26742577,26746798	Gene ID= ENSG00000148459.15 TPM= 8.5 Transcript Type= protein_coding
chr10	26747814	26860957	26747814	26860957	-	transcript850.chr10.nnic@ABI1	transcript850.chr10.nnic	protein_coding	26860747,26823138,26777065,26771075,26770245,26768852,26765218,26763880,26751598,26747814	26860957,26823305,26777241,26771089,26770345,26768992,26765318,26763960,26751783,26748745	Gene ID= ENSG00000136754.17 TPM= 2.12 Transcript Type= NA
chr10	26746596	26861087	26746596	26861087	-	ENST00000376137.8@ABI1	ENST00000376137.8	protein_coding	26860747,26823138,26777065,26771075,26770245,26768852,26765218,26755655,26751598,26746596	26861087,26823305,26777241,26771089,26770345,26768992,26765318,26755741,26751783,26748745	Gene ID= ENSG00000136754.17 TPM= 1.06 Transcript Type= protein_coding
chr10	26746596	26861087	26746596	26861087	-	ENST00000536334.5@ABI1	ENST00000536334.5	protein_coding	26860747,26823138,26777065,26771075,26770245,26768852,26765218,26751598,26746596	26861087,26823305,26777241,26771089,26770345,26768992,26765318,26751783,26748745	Gene ID= ENSG00000136754.17 TPM= 1.06 Transcript Type= protein_coding
chr10	26746593	26860935	26746593	26860935	-	ENST00000376142.6@ABI1	ENST00000376142.6	protein_coding	26860747,26823138,26777065,26771075,26770245,26768852,26765218,26763880,26759062,26755655,26751598,26746593	26860935,26823305,26777241,26771089,26770345,26768992,26765318,26763960,26759238,26755741,26751783,26748745	Gene ID= ENSG00000136754.17 TPM= 3.19 Transcript Type= protein_coding
chr10	27037996	27100500	27037996	27100500	-	transcript859.chr10.nic@ANKRD26	transcript859.chr10.nic	protein_coding	27100085,27093685,27093349,27092406,27086539,27082803,27079089,27077633,27077338,27067157,27066487,27063988,27061144,27060512,27060345,27053320,27048801,27046353,27044157,27043426,27039965,27037996	27100500,27093799,27093522,27092512,27086609,27082833,27079161,27077693,27077540,27067286,27066548,27064081,27061242,27060540,27060417,27053390,27048979,27046523,27044190,27043567,27040178,27038054	Gene ID= ENSG00000107890.16 TPM= 3.19 Transcript Type= NA
chr10	27004116	27100498	27004116	27100498	-	ENST00000436985.6@ANKRD26	ENST00000436985.6	protein_coding	27100085,27093685,27093349,27092406,27086539,27082803,27080032,27079089,27077633,27077338,27067157,27066487,27063988,27060512,27060345,27053320,27048801,27046353,27044157,27043426,27039965,27037871,27037186,27034796,27033225,27029286,27028852,27024447,27022558,27017502,27014494,27012882,27006917,27004116	27100498,27093799,27093522,27092512,27086609,27082833,27080178,27079161,27077693,27077540,27067286,27066548,27064081,27060540,27060417,27053390,27048979,27046523,27044190,27043567,27040178,27038054,27037323,27035752,27033377,27029356,27028945,27024559,27022687,27017792,27014711,27013110,27006962,27005723	Gene ID= ENSG00000107890.16 TPM= 2.12 Transcript Type= protein_coding
chr10	27081460	27082072	27081460	27082072	+	transcript866.chr10.nnic@NA	transcript866.chr10.nnic	NA	27081460	27082072	Gene ID= novel_gene_chr10_867 TPM= 5.31 Transcript Type= NA
chr10	27110454	27154392	27110454	27154392	-	ENST00000376016.7@YME1L1	ENST00000376016.7	protein_coding	27154178,27148906,27145428,27142387,27136276,27134831,27134039,27131859,27126696,27123547,27122841,27121386,27120435,27119294,27117576,27116219,27116060,27114521,27110454	27154392,27149040,27145590,27142485,27136385,27134981,27134122,27131941,27126786,27123699,27122973,27121448,27120547,27119449,27117727,27116345,27116133,27114607,27112120	Gene ID= ENSG00000136758.18 TPM= 61.61 Transcript Type= protein_coding
chr10	27195217	27240816	27195217	27240816	-	transcript885.chr10.nic@ACBD5	transcript885.chr10.nic	protein_coding	27240674,27240319,27235092,27231748,27223338,27223207,27219723,27217980,27215535,27210814,27208246,27205198,27204440,27195217	27240816,27240484,27235212,27231820,27223452,27223239,27219857,27218183,27215641,27211081,27208445,27205248,27204549,27197442	Gene ID= ENSG00000107897.18 TPM= 11.66 Transcript Type= NA
chr10	27195217	27240829	27195217	27240829	-	transcript891.chr10.nic@ACBD5	transcript891.chr10.nic	protein_coding	27240674,27240319,27235092,27231748,27223338,27219723,27217980,27215535,27210814,27208246,27205198,27204440,27195217	27240829,27240474,27235212,27231820,27223452,27219857,27218183,27215641,27211081,27208445,27205248,27204549,27197442	Gene ID= ENSG00000107897.18 TPM= 13.09 Transcript Type= NA
chr10	27195217	27242130	27195217	27242130	-	ENST00000375905.8@ACBD5	ENST00000375905.8	protein_coding	27242059,27240319,27235092,27231748,27223338,27219723,27217980,27215535,27210814,27208246,27205198,27204440,27195217	27242130,27240484,27235212,27231820,27223452,27219857,27218183,27215641,27211081,27208445,27205248,27204549,27197442	Gene ID= ENSG00000107897.18 TPM= 24.59 Transcript Type= protein_coding
chr10	27195215	27240879	27195215	27240879	-	ENST00000375897.7@ACBD5	ENST00000375897.7	protein_coding	27240319,27235092,27231748,27223338,27219723,27217980,27215535,27210814,27208246,27205198,27204440,27195215	27240879,27235212,27231820,27223452,27219857,27218183,27215641,27211081,27208445,27205248,27204549,27197442	Gene ID= ENSG00000107897.18 TPM= 14.68 Transcript Type= protein_coding
chr10	27204447	27240792	27204447	27240792	-	transcript910.chr10.nic@ACBD5	transcript910.chr10.nic	protein_coding	27240674,27240319,27235092,27231748,27223338,27219723,27217980,27215535,27210814,27208246,27205198,27204447	27240792,27240484,27235212,27231820,27223452,27219857,27218183,27215641,27211081,27208445,27205248,27204549	Gene ID= ENSG00000107897.18 TPM= 3.19 Transcript Type= NA
chr10	27195214	27240815	27195214	27240815	-	ENST00000396271.7@ACBD5	ENST00000396271.7	protein_coding	27240674,27240319,27235092,27231748,27223338,27219723,27217980,27215535,27210814,27208246,27205198,27204440,27195214	27240815,27240484,27235212,27231820,27223452,27219857,27218183,27215641,27211081,27208445,27205248,27204549,27197442	Gene ID= ENSG00000107897.18 TPM= 57.07 Transcript Type= protein_coding
chr10	27504309	27539828	27504309	27539828	+	transcript924.chr10.nic@RAB18	transcript924.chr10.nic	protein_coding	27504309,27509875,27526828,27532507,27533735,27537876	27504437,27509930,27526889,27532579,27533994,27539828	Gene ID= ENSG00000099246.16 TPM= 6.37 Transcript Type= NA
chr10	27504394	27514217	27504394	27514217	+	ENST00000484281.1@RAB18	ENST00000484281.1	protein_coding	27504394,27509875,27513963	27504437,27509930,27514217	Gene ID= ENSG00000099246.16 TPM= 1.06 Transcript Type= processed_transcript
chr10	28050993	28303077	28050993	28303077	-	transcript929.chr10.nnic@MPP7	transcript929.chr10.nnic	protein_coding	28302861,28238568,28202153,28149982,28147483,28131560,28125010,28124031,28120594,28120194,28119651,28089671,28069772,28059650,28058495,28056480,28050993	28303077,28238735,28202271,28150059,28147563,28131691,28125091,28124116,28120668,28120390,28119715,28089841,28069852,28059743,28058603,28056623,28054244	Gene ID= ENSG00000150054.18 TPM= 5.31 Transcript Type= NA
chr10	28525525	28533046	28525525	28533046	-	transcript980.chr10.nic@WAC-AS1	transcript980.chr10.nic	antisense_RNA	28532442,28525525	28533046,28526008	Gene ID= ENSG00000254635.5 TPM= 2.12 Transcript Type= NA
chr10	28522652	28532743	28522652	28532743	-	ENST00000527986.5@WAC-AS1	ENST00000527986.5	antisense_RNA	28532442,28525948,28522652	28532743,28526008,28524611	Gene ID= ENSG00000254635.5 TPM= 6.37 Transcript Type= antisense_RNA
chr10	28529065	28531607	28529065	28531607	+	transcript981.chr10.nnic@NA	transcript981.chr10.nnic	NA	28529065	28531607	Gene ID= novel_gene_chr10_982 TPM= 6.37 Transcript Type= NA
chr10	28533109	28619979	28533109	28619979	+	transcript943.chr10.nnic@WAC	transcript943.chr10.nnic	protein_coding	28533109,28533500,28533998,28535544,28583399,28589736,28590720,28595733,28608186,28610699,28611774,28614567,28616173,28617657,28619537	28533148,28533620,28534034,28535757,28583505,28589851,28590832,28596041,28608431,28610821,28611922,28614685,28616362,28617784,28619979	Gene ID= ENSG00000095787.21 TPM= 5.31 Transcript Type= NA
chr10	28532493	28623112	28532493	28623112	+	ENST00000375664.8@WAC	ENST00000375664.8	protein_coding	28532493,28533998,28535562,28583399,28589736,28590720,28595733,28608186,28610699,28611774,28614567,28616173,28617657,28619537	28533007,28534034,28535757,28583505,28589851,28590832,28596041,28608431,28610821,28611922,28614685,28616362,28617784,28623112	Gene ID= ENSG00000095787.21 TPM= 4.25 Transcript Type= protein_coding
chr10	28533086	28620991	28533086	28620991	+	transcript953.chr10.nnic@WAC	transcript953.chr10.nnic	protein_coding	28533086,28533998,28535544,28583399,28589736,28590720,28595733,28608186,28610699,28611774,28614567,28616173,28617657,28619537	28533620,28534034,28535757,28583505,28589851,28590832,28596041,28608431,28610821,28611922,28614685,28616362,28617784,28620991	Gene ID= ENSG00000095787.21 TPM= 10.09 Transcript Type= NA
chr10	28533728	28620991	28533728	28620991	+	transcript961.chr10.nic@WAC	transcript961.chr10.nic	protein_coding	28533728,28533998,28535562,28583399,28589736,28590720,28595733,28608186,28610699,28611774,28614567,28616173,28617657,28619537	28533893,28534034,28535757,28583505,28589851,28590832,28596041,28608431,28610821,28611922,28614685,28616362,28617784,28620991	Gene ID= ENSG00000095787.21 TPM= 6.9 Transcript Type= NA
chr10	28677342	28682939	28677342	28682939	+	ENST00000375533.5@BAMBI	ENST00000375533.5	protein_coding	28677342,28681258,28681983	28677973,28681545,28682939	Gene ID= ENSG00000095739.10 TPM= 181.63 Transcript Type= protein_coding
chr10	28677522	28682767	28677522	28682767	+	transcript990.chr10.nnic@NA	transcript990.chr10.nnic	NA	28677522	28682767	Gene ID= novel_gene_chr10_991 TPM= 2.12 Transcript Type= NA
chr10	29409557	29427648	29409557	29427648	+	transcript1028.chr10.nnic@SVIL-AS1	transcript1028.chr10.nnic	antisense_RNA	29409557,29415357,29420491,29423798	29409683,29415412,29423222,29427648	Gene ID= ENSG00000224597.9 TPM= 3.72 Transcript Type= NA
chr10	29409534	29457835	29409534	29457835	+	transcript1050.chr10.nnic@SVIL-AS1	transcript1050.chr10.nnic	antisense_RNA	29409534,29415357,29457651	29409658,29415412,29457835	Gene ID= ENSG00000224597.9 TPM= 4.25 Transcript Type= NA
chr10	29409572	29422372	29409572	29422372	+	ENST00000427063.6@SVIL-AS1	ENST00000427063.6	antisense_RNA	29409572,29415357,29420491	29409658,29415412,29422372	Gene ID= ENSG00000224597.9 TPM= 12.75 Transcript Type= antisense_RNA
chr10	29409597	29420748	29409597	29420748	+	ENST00000623175.3@SVIL-AS1	ENST00000623175.3	antisense_RNA	29409597,29415357,29420491	29409683,29415412,29420748	Gene ID= ENSG00000224597.9 TPM= 1.06 Transcript Type= antisense_RNA
chr10	29457348	29634972	29457348	29634972	-	ENST00000375398.6@SVIL	ENST00000375398.6	protein_coding	29634420,29569255,29563201,29555051,29554783,29550597,29535989,29532529,29532002,29531254,29530607,29529705,29524472,29523451,29522410,29512735,29499116,29495092,29494914,29493214,29490847,29488601,29487163,29486410,29486085,29484656,29481584,29480537,29473838,29471138,29470276,29467742,29465595,29463492,29462277,29458434,29457348	29634972,29569312,29563292,29555108,29554934,29551263,29536069,29533458,29532172,29531288,29530668,29529844,29524715,29524027,29522635,29512861,29499263,29495181,29495000,29493391,29491019,29488756,29487299,29486557,29486230,29484831,29481728,29480813,29473989,29471243,29470483,29467875,29465750,29463635,29462401,29458589,29458333	Gene ID= ENSG00000197321.14 TPM= 186.47 Transcript Type= protein_coding
chr10	29533065	29737075	29533065	29737075	-	transcript1009.chr10.nic@SVIL	transcript1009.chr10.nic	protein_coding	29736685,29686553,29657969,29569255,29563201,29555051,29554783,29550597,29535989,29533065	29737075,29686651,29658068,29569312,29563292,29555108,29554934,29551263,29536069,29533458	Gene ID= ENSG00000197321.14 TPM= 7.91 Transcript Type= NA
chr10	29533065	29634946	29533065	29634946	-	transcript1014.chr10.nnic@SVIL	transcript1014.chr10.nnic	protein_coding	29634527,29569255,29563201,29555051,29554783,29550597,29535989,29533065	29634946,29569312,29563292,29555108,29554934,29551263,29536069,29533458	Gene ID= ENSG00000197321.14 TPM= 13.22 Transcript Type= NA
chr10	29508031	29522568	29508031	29522568	-	ENST00000464984.1@SVIL	ENST00000464984.1	protein_coding	29522410,29512735,29508031	29522568,29512861,29508389	Gene ID= ENSG00000197321.14 TPM= 9.56 Transcript Type= processed_transcript
chr10	29464976	29465930	29464976	29465930	+	transcript1068.chr10.nnic@NA	transcript1068.chr10.nnic	NA	29464976	29465930	Gene ID= novel_gene_chr10_1069 TPM= 3.19 Transcript Type= NA
chr10	29607387	29610212	29607387	29610212	-	transcript1076.chr10.nnic@NA	transcript1076.chr10.nnic	NA	29607387	29610212	Gene ID= novel_gene_chr10_1077 TPM= 3.19 Transcript Type= NA
chr10	29622446	29624180	29622446	29624180	+	transcript1064.chr10.nnic@NA	transcript1064.chr10.nnic	NA	29622446	29624180	Gene ID= novel_gene_chr10_1065 TPM= 3.19 Transcript Type= NA
chr10	29631295	29634205	29631295	29634205	+	transcript1066.chr10.nnic@NA	transcript1066.chr10.nnic	NA	29631295	29634205	Gene ID= novel_gene_chr10_1067 TPM= 2.12 Transcript Type= NA
chr10	29633665	29634915	29633665	29634915	-	transcript1074.chr10.nnic@NA	transcript1074.chr10.nnic	NA	29633665	29634915	Gene ID= novel_gene_chr10_1075 TPM= 2.12 Transcript Type= NA
chr10	30012800	30059524	30012800	30059524	-	ENST00000375377.1@JCAD	ENST00000375377.1	protein_coding	30059482,30047532,30026103,30012800	30059524,30047871,30029866,30017917	Gene ID= ENSG00000165757.8 TPM= 15.93 Transcript Type= protein_coding
chr10	30309801	30349319	30309801	30349319	-	ENST00000263063.8@MTPAP	ENST00000263063.8	protein_coding	30349119,30341468,30340226,30336803,30326424,30322391,30316118,30315963,30309801	30349319,30341640,30340450,30337027,30326635,30322617,30316210,30316036,30313971	Gene ID= ENSG00000107951.14 TPM= 210.31 Transcript Type= protein_coding
chr10	30844781	30974857	30844781	30974857	-	transcript1105.chr10.nnic@ZNF438	transcript1105.chr10.nnic	protein_coding	30974594,30908933,30876998,30848531,30844781	30974857,30909015,30877065,30850367,30845573	Gene ID= ENSG00000183621.15 TPM= 4.25 Transcript Type= NA
chr10	30901452	30904028	30901452	30904028	+	transcript1110.chr10.nnic@NA	transcript1110.chr10.nnic	NA	30901452	30904028	Gene ID= novel_gene_chr10_1111 TPM= 4.25 Transcript Type= NA
chr10	31316528	31319030	31316528	31319030	-	ENST00000607166.1@ZEB1-AS1	ENST00000607166.1	antisense_RNA	31316528	31319030	Gene ID= ENSG00000237036.4 TPM= 2.12 Transcript Type= antisense_RNA
chr10	31319203	31529202	31319203	31529202	+	transcript1114.chr10.nnic@ZEB1	transcript1114.chr10.nnic	protein_coding	31319203,31387124,31461037,31495776,31502348,31510673,31514603,31520126,31523933,31526672	31319292,31387266,31461237,31495838,31502509,31510875,31514708,31521936,31524113,31529202	Gene ID= ENSG00000148516.21 TPM= 6.98 Transcript Type= NA
chr10	31319216	31529814	31319216	31529814	+	ENST00000437844.6@ZEB1	ENST00000437844.6	protein_coding	31319216,31373018,31387124,31461037,31495776,31502348,31510673,31514603,31520126,31523933,31526672	31319292,31373173,31387266,31461237,31495838,31502509,31510875,31514708,31521936,31524113,31529814	Gene ID= ENSG00000148516.21 TPM= 1.67 Transcript Type= nonsense_mediated_decay
chr10	31319172	31529813	31319172	31529813	+	ENST00000361642.9@ZEB1	ENST00000361642.9	protein_coding	31319172,31461037,31495776,31502348,31510673,31514603,31520126,31523933,31526672	31319292,31461237,31495838,31502509,31510875,31514708,31521936,31524113,31529813	Gene ID= ENSG00000148516.21 TPM= 4.85 Transcript Type= protein_coding
chr10	31319125	31529202	31319125	31529202	+	ENST00000320985.14@ZEB1	ENST00000320985.14	protein_coding	31319125,31461037,31495779,31502348,31510673,31514603,31520126,31523933,31526672	31319292,31461237,31495838,31502509,31510875,31514708,31521936,31524113,31529202	Gene ID= ENSG00000148516.21 TPM= 21.85 Transcript Type= protein_coding
chr10	31320126	31520811	31320126	31520811	+	ENST00000561212.5@ZEB1	ENST00000561212.5	protein_coding	31320126,31461037,31495779,31502348,31510673,31514603,31520126	31320207,31461237,31495838,31502509,31510875,31514708,31520811	Gene ID= ENSG00000148516.21 TPM= 5.84 Transcript Type= protein_coding
chr10	31363149	31365452	31363149	31365452	+	transcript1134.chr10.nnic@NA	transcript1134.chr10.nnic	NA	31363149	31365452	Gene ID= novel_gene_chr10_1135 TPM= 3.19 Transcript Type= NA
chr10	31398993	31399842	31398993	31399842	-	transcript1136.chr10.nnic@NA	transcript1136.chr10.nnic	NA	31398993	31399842	Gene ID= novel_gene_chr10_1137 TPM= 3.19 Transcript Type= NA
chr10	31806306	31928807	31806306	31928807	-	ENST00000344936.6@ARHGAP12	ENST00000344936.6	protein_coding	31928683,31910525,31908172,31861395,31854066,31852517,31843461,31839637,31839305,31831739,31826304,31820387,31817788,31814259,31812707,31810649,31809230,31808994,31808649,31806306	31928807,31910563,31908926,31861658,31854206,31852597,31843586,31839711,31839319,31831800,31826385,31820488,31817886,31814361,31812823,31810747,31809307,31809128,31808751,31807832	Gene ID= ENSG00000165322.17 TPM= 10.62 Transcript Type= protein_coding
chr10	32009010	32056431	32009010	32056431	-	ENST00000302418.4@KIF5B	ENST00000302418.4	protein_coding	32055848,32048464,32040384,32039327,32038778,32038163,32037520,32037254,32035890,32035522,32034690,32033845,32032706,32031073,32028428,32022848,32022140,32021226,32021022,32019858,32018502,32018316,32018052,32017143,32015509,32009010	32056431,32048551,32040457,32039431,32038826,32038218,32037607,32037378,32035994,32035667,32034838,32034038,32032774,32031279,32028571,32023036,32022257,32021287,32021131,32019959,32018562,32018387,32018156,32017359,32015659,32011516	Gene ID= ENSG00000170759.10 TPM= 54.17 Transcript Type= protein_coding
chr10	32267751	32347218	32267751	32347218	-	ENST00000319778.10@EPC1	ENST00000319778.10	protein_coding	32346763,32305772,32293592,32292988,32292496,32291163,32287098,32286926,32286694,32284698,32273163,32272026,32271554,32267751	32347218,32305931,32293737,32293194,32292644,32291322,32287274,32287015,32286842,32285050,32273281,32272167,32271917,32269135	Gene ID= ENSG00000120616.15 TPM= 5.31 Transcript Type= protein_coding
chr10	32345112	32347218	32345112	32347218	-	ENST00000480402.1@EPC1	ENST00000480402.1	protein_coding	32346763,32345112	32347218,32345562	Gene ID= ENSG00000120616.15 TPM= 1.06 Transcript Type= processed_transcript
chr10	32267751	32378798	32267751	32378798	-	ENST00000375110.6@EPC1	ENST00000375110.6	protein_coding	32378491,32305772,32293592,32292988,32292496,32291163,32287098,32286926,32286694,32284698,32273163,32272026,32271554,32267751	32378798,32305931,32293737,32293194,32292644,32291322,32287274,32287015,32286842,32285050,32273281,32272167,32271917,32269135	Gene ID= ENSG00000120616.15 TPM= 1.06 Transcript Type= protein_coding
chr10	32900392	32958209	32900392	32958209	-	ENST00000302278.7@ITGB1	ENST00000302278.7	protein_coding	32958145,32935492,32932515,32929822,32928094,32925871,32923585,32922640,32922257,32920245,32919885,32911886,32911448,32910223,32908368,32900392	32958209,32935558,32932600,32930044,32928264,32926109,32923740,32922735,32922346,32920385,32920084,32912124,32911670,32910455,32908534,32901635	Gene ID= ENSG00000150093.18 TPM= 163.48 Transcript Type= protein_coding
chr10	32901564	32903371	32901564	32903371	+	transcript1218.chr10.nnic@NA	transcript1218.chr10.nnic	NA	32901564	32903371	Gene ID= novel_gene_chr10_1219 TPM= 43.55 Transcript Type= NA
chr10	33194367	33334779	33194367	33334779	-	transcript1226.chr10.nnic@NRP1	transcript1226.chr10.nnic	protein_coding	33334310,33330708,33270675,33263646,33256316,33254028,33226134,33221719,33213386,33207572,33202891,33197650,33194367	33334779,33330882,33270856,33263873,33256471,33254194,33226291,33221865,33213717,33207718,33202995,33197709,33194780	Gene ID= ENSG00000099250.17 TPM= 99.76 Transcript Type= NA
chr10	33252997	33334779	33252997	33334779	-	transcript1231.chr10.nic@NRP1	transcript1231.chr10.nic	protein_coding	33334310,33330708,33270675,33263646,33256316,33252997	33334779,33330882,33270856,33263873,33256471,33254194	Gene ID= ENSG00000099250.17 TPM= 66.3 Transcript Type= NA
chr10	33197621	33334642	33197621	33334642	-	ENST00000374822.8@NRP1	ENST00000374822.8	protein_coding	33334310,33330708,33270675,33263646,33256316,33254028,33226134,33221719,33213386,33207572,33202891,33197621	33334642,33330882,33270856,33263873,33256471,33254194,33226289,33221863,33213717,33207716,33202995,33197709	Gene ID= ENSG00000099250.17 TPM= 23.1 Transcript Type= protein_coding
chr10	33192973	33197470	33192973	33197470	-	transcript1239.chr10.nnic@NA	transcript1239.chr10.nnic	NA	33192973	33197470	Gene ID= novel_gene_chr10_1240 TPM= 8.5 Transcript Type= NA
chr10	34312260	34815332	34312260	34815332	-	transcript1243.chr10.nic@PARD3	transcript1243.chr10.nic	protein_coding	34814876,34696318,34516979,34470085,34450317,34401826,34399330,34384129,34382540,34377967,34374874,34372498,34360071,34359147,34347965,34341627,34337275,34331117,34317107,34312260	34815332,34696419,34517159,34470263,34450448,34401917,34399413,34384254,34382922,34378106,34375002,34372536,34360259,34359317,34348115,34341816,34337426,34331344,34317338,34312382	Gene ID= ENSG00000148498.15 TPM= 6.72 Transcript Type= NA
chr10	34317206	34815332	34317206	34815332	-	transcript1248.chr10.nic@PARD3	transcript1248.chr10.nic	protein_coding	34814876,34696318,34516979,34470085,34450317,34401826,34399330,34384129,34382540,34377967,34374874,34360071,34359147,34347965,34341627,34337275,34331117,34317206	34815332,34696419,34517159,34470263,34450448,34401917,34399413,34384254,34382922,34378106,34375002,34360259,34359317,34348115,34341816,34337426,34331344,34317338	Gene ID= ENSG00000148498.15 TPM= 3.54 Transcript Type= NA
chr10	34634756	34640734	34634756	34640734	+	transcript1254.chr10.nnic@NA	transcript1254.chr10.nnic	NA	34634756	34640734	Gene ID= novel_gene_chr10_1255 TPM= 6.37 Transcript Type= NA
chr10	35009870	35090372	35009870	35090372	-	transcript1257.chr10.nic@CUL2	transcript1257.chr10.nic	protein_coding	35089896,35071199,35062960,35060874,35054434,35049683,35044772,35044566,35038920,35035172,35033166,35032435,35031491,35031300,35029488,35028810,35025132,35016192,35013699,35011848,35009870	35090372,35071339,35063062,35060968,35054539,35049765,35044868,35044676,35039082,35035296,35033273,35032494,35031619,35031386,35029640,35028887,35025198,35016394,35013800,35011964,35010442	Gene ID= ENSG00000108094.14 TPM= 13.81 Transcript Type= NA
chr10	35008551	35090366	35008551	35090366	-	ENST00000374749.7@CUL2	ENST00000374749.7	protein_coding	35090179,35071199,35062960,35060874,35054434,35049683,35044772,35044566,35038920,35035172,35033166,35032435,35031491,35031300,35029488,35028810,35025132,35016192,35013699,35011848,35008551	35090366,35071339,35063062,35060968,35054539,35049765,35044868,35044676,35039082,35035296,35033273,35032494,35031619,35031386,35029640,35028887,35025198,35016394,35013800,35011964,35010442	Gene ID= ENSG00000108094.14 TPM= 23.9 Transcript Type= protein_coding
chr10	35008551	35090642	35008551	35090642	-	ENST00000374751.7@CUL2	ENST00000374751.7	protein_coding	35090430,35071199,35062960,35060874,35054434,35049683,35044772,35044566,35038920,35035172,35033166,35032435,35031491,35031300,35029488,35028810,35025132,35016192,35013699,35011848,35008551	35090642,35071339,35063062,35060968,35054539,35049765,35044868,35044676,35039082,35035296,35033273,35032494,35031619,35031386,35029640,35028887,35025198,35016394,35013800,35011964,35010442	Gene ID= ENSG00000108094.14 TPM= 29.74 Transcript Type= protein_coding
chr10	35127100	35211865	35127100	35211865	+	transcript1272.chr10.nic@CREM	transcript1272.chr10.nic	protein_coding	35127100,35148368,35178889,35179134,35206895,35211254	35127193,35148491,35178986,35179276,35207051,35211865	Gene ID= ENSG00000095794.19 TPM= 3.19 Transcript Type= NA
chr10	35126946	35212379	35126946	35212379	+	transcript1275.chr10.nic@CREM	transcript1275.chr10.nic	protein_coding	35126946,35148368,35178889,35179134,35206895,35211656	35127193,35148491,35178986,35179276,35207051,35212379	Gene ID= ENSG00000095794.19 TPM= 2.12 Transcript Type= NA
chr10	35126958	35211876	35126958	35211876	+	transcript1288.chr10.nic@CREM	transcript1288.chr10.nic	protein_coding	35126958,35148368,35206895,35211656	35127193,35148491,35207051,35211876	Gene ID= ENSG00000095794.19 TPM= 4.25 Transcript Type= NA
chr10	35126791	35212125	35126791	35212125	+	ENST00000474362.5@CREM	ENST00000474362.5	protein_coding	35126791,35206895,35211656	35127193,35207051,35212125	Gene ID= ENSG00000095794.19 TPM= 2.12 Transcript Type= protein_coding
chr10	35195133	35212465	35195133	35212465	+	ENST00000488328.5@CREM	ENST00000488328.5	protein_coding	35195133,35206895,35211656	35195214,35207051,35212465	Gene ID= ENSG00000095794.19 TPM= 1.06 Transcript Type= protein_coding
chr10	35126923	35179847	35126923	35179847	+	ENST00000374726.7@CREM	ENST00000374726.7	protein_coding	35126923,35148368,35178889,35179134	35127193,35148491,35178986,35179847	Gene ID= ENSG00000095794.19 TPM= 13.81 Transcript Type= protein_coding
chr10	35314550	35317088	35314550	35317088	-	transcript1314.chr10.nnic@NA	transcript1314.chr10.nnic	NA	35314550	35317088	Gene ID= novel_gene_chr10_1315 TPM= 2.12 Transcript Type= NA
chr10	35345276	35350250	35345276	35350250	-	transcript1343.chr10.nnic@NA	transcript1343.chr10.nnic	NA	35345276	35350250	Gene ID= novel_gene_chr10_1344 TPM= 3.19 Transcript Type= NA
chr10	35370156	35374610	35370156	35374610	-	transcript1341.chr10.nnic@NA	transcript1341.chr10.nnic	NA	35370156	35374610	Gene ID= novel_gene_chr10_1342 TPM= 3.19 Transcript Type= NA
chr10	37828765	37858084	37828765	37858084	-	ENST00000357328.8@ZNF248	ENST00000357328.8	protein_coding	37858005,37856435,37856296,37837985,37837617,37828765	37858084,37856532,37856337,37838111,37837712,37833116	Gene ID= ENSG00000198105.13 TPM= 1.06 Transcript Type= protein_coding
chr10	37828765	37857610	37828765	37857610	-	ENST00000395867.7@ZNF248	ENST00000395867.7	protein_coding	37857185,37856435,37856296,37837985,37837617,37828765	37857610,37856532,37856337,37838111,37837712,37833116	Gene ID= ENSG00000198105.13 TPM= 4.25 Transcript Type= protein_coding
chr10	37949572	37976633	37949572	37976633	-	ENST00000302609.7@ZNF25	ENST00000302609.7	protein_coding	37976506,37971708,37957420,37957020,37953695,37949572	37976633,37971807,37957546,37957115,37953758,37953195	Gene ID= ENSG00000175395.15 TPM= 16.99 Transcript Type= protein_coding
chr10	37976048	37976629	37976048	37976629	-	transcript1362.chr10.nnic@NA	transcript1362.chr10.nnic	NA	37976048	37976629	Gene ID= novel_gene_chr10_1363 TPM= 2.12 Transcript Type= NA
chr10	38012427	38013898	38012427	38013898	-	transcript1370.chr10.nnic@NA	transcript1370.chr10.nnic	NA	38012427	38013898	Gene ID= novel_gene_chr10_1371 TPM= 4.25 Transcript Type= NA
chr10	38094336	38123348	38094336	38123348	+	ENST00000351773.7@ZNF37A	ENST00000351773.7	protein_coding	38094336,38094931,38095358,38095744,38096574,38114755,38115195,38117390	38094490,38095224,38095633,38095804,38096632,38114881,38115290,38123348	Gene ID= ENSG00000075407.18 TPM= 2.12 Transcript Type= protein_coding
chr10	38122147	38124629	38122147	38124629	+	transcript1391.chr10.nnic@NA	transcript1391.chr10.nnic	NA	38122147	38124629	Gene ID= novel_gene_chr10_1392 TPM= 2.12 Transcript Type= NA
chr10	38356383	38360138	38356383	38360138	+	transcript1393.chr10.nic@HSD17B7P2	transcript1393.chr10.nic	transcribed_unprocessed_pseudogene	38356383,38358312	38356489,38360138	Gene ID= ENSG00000099251.14 TPM= 4.25 Transcript Type= NA
chr10	42592231	42638570	42592231	42638570	-	transcript1406.chr10.nic@ZNF33B	transcript1406.chr10.nic	protein_coding	42638474,42636920,42632295,42631929,42614282,42592231	42638570,42636972,42632439,42632024,42614358,42594699	Gene ID= ENSG00000196693.14 TPM= 3.19 Transcript Type= NA
chr10	42782801	42831399	42782801	42831399	+	transcript1414.chr10.nnic@BMS1	transcript1414.chr10.nnic	protein_coding	42782801,42784362,42785482,42787168,42790323,42791627,42792493,42792957,42793852,42796474,42797422,42798468,42802137,42816599,42817318,42820236,42820508,42820934,42822062,42823118,42823609,42830261,42830866	42782998,42784570,42785672,42787247,42790511,42791769,42792614,42793144,42793991,42797231,42797523,42798625,42802218,42816672,42817494,42820424,42820688,42820992,42822184,42823265,42823784,42830422,42831399	Gene ID= ENSG00000165733.7 TPM= 14.87 Transcript Type= NA
chr10	42782763	42797177	42782763	42797177	+	transcript1417.chr10.nic@BMS1	transcript1417.chr10.nic	protein_coding	42782763,42784362,42785482,42787168,42790323,42791627,42792493,42792957,42793852,42796474	42782830,42784570,42785672,42787247,42790511,42791769,42792614,42793144,42793991,42797177	Gene ID= ENSG00000165733.7 TPM= 14.87 Transcript Type= NA
chr10	43138445	43183773	43138445	43183773	+	transcript1422.chr10.nnic@CSGALNACT2	transcript1422.chr10.nnic	protein_coding	43138445,43154897,43158715,43160494,43162200,43167004,43175951,43183250	43138567,43155810,43158931,43160595,43164044,43167098,43176032,43183773	Gene ID= ENSG00000169826.7 TPM= 2.12 Transcript Type= NA
chr10	43138450	43185308	43138450	43185308	+	transcript1427.chr10.nnic@CSGALNACT2	transcript1427.chr10.nnic	protein_coding	43138450,43154897,43158715,43160494,43175951,43183250	43138567,43155810,43158931,43160595,43176032,43185308	Gene ID= ENSG00000169826.7 TPM= 2.12 Transcript Type= NA
chr10	43138486	43185308	43138486	43185308	+	ENST00000374466.3@CSGALNACT2	ENST00000374466.3	protein_coding	43138486,43154897,43158715,43160494,43163866,43167004,43175951,43183250	43138567,43155810,43158931,43160595,43164044,43167098,43176032,43185308	Gene ID= ENSG00000169826.7 TPM= 9.56 Transcript Type= protein_coding
chr10	43385617	43407819	43385617	43407819	-	ENST00000357065.8@HNRNPF	ENST00000357065.8	protein_coding	43407717,43396456,43394630,43385617	43407819,43396590,43394688,43387936	Gene ID= ENSG00000169813.16 TPM= 3.19 Transcript Type= protein_coding
chr10	43385617	43409241	43385617	43409241	-	transcript1438.chr10.nnic@HNRNPF	transcript1438.chr10.nnic	protein_coding	43409131,43396456,43394630,43385617	43409241,43396590,43394688,43387936	Gene ID= ENSG00000169813.16 TPM= 9.91 Transcript Type= NA
chr10	43386022	43409166	43386022	43409166	-	ENST00000337970.7@HNRNPF	ENST00000337970.7	protein_coding	43409090,43396456,43394630,43386022	43409166,43396590,43394688,43387936	Gene ID= ENSG00000169813.16 TPM= 42.49 Transcript Type= protein_coding
chr10	43556347	43574618	43556347	43574618	-	ENST00000426961.1@ZNF239	ENST00000426961.1	protein_coding	43574540,43567899,43556347	43574618,43568021,43558171	Gene ID= ENSG00000196793.13 TPM= 1.06 Transcript Type= protein_coding
chr10	43556344	43574584	43556344	43574584	-	ENST00000374446.6@ZNF239	ENST00000374446.6	protein_coding	43574540,43573637,43567899,43556344	43574584,43573677,43568021,43558171	Gene ID= ENSG00000196793.13 TPM= 1.06 Transcript Type= protein_coding
chr10	43606407	43617903	43606407	43617903	+	ENST00000361807.7@ZNF485	ENST00000361807.7	protein_coding	43606407,43606997,43608614,43609255,43616291	43606546,43607074,43608740,43609350,43617903	Gene ID= ENSG00000198298.12 TPM= 4.25 Transcript Type= protein_coding
chr10	43643859	43648856	43643859	43648856	-	ENST00000374433.6@ZNF32	ENST00000374433.6	protein_coding	43648802,43646064,43643859	43648856,43646202,43644801	Gene ID= ENSG00000169740.13 TPM= 42.49 Transcript Type= protein_coding
chr10	43859369	43875914	43859369	43875914	+	transcript1467.chr10.nic@LINC00840	transcript1467.chr10.nic	lincRNA	43859369,43861879,43867157,43874190	43860360,43861927,43867339,43875914	Gene ID= ENSG00000226808.1 TPM= 2.12 Transcript Type= NA
chr10	44292084	44294007	44292084	44294007	-	transcript1469.chr10.nnic@AL137026.1	transcript1469.chr10.nnic	lincRNA	44293837,44293272,44292084	44294007,44293761,44292734	Gene ID= ENSG00000229116.2 TPM= 2.12 Transcript Type= NA
chr10	44370165	44385092	44370165	44385092	-	ENST00000374429.6@CXCL12	ENST00000374429.6	protein_coding	44384945,44380763,44378637,44370165	44385092,44380880,44378723,44373343	Gene ID= ENSG00000107562.16 TPM= 40.89 Transcript Type= protein_coding
chr10	44377133	44385092	44377133	44385092	-	ENST00000343575.10@CXCL12	ENST00000343575.10	protein_coding	44384945,44380763,44377133	44385092,44380880,44378723	Gene ID= ENSG00000107562.16 TPM= 29.74 Transcript Type= protein_coding
chr10	44372639	44376927	44372639	44376927	+	transcript1478.chr10.nnic@NA	transcript1478.chr10.nnic	NA	44372639	44376927	Gene ID= novel_gene_chr10_1479 TPM= 13.28 Transcript Type= NA
chr10	44959725	44994707	44959725	44994707	+	transcript1482.chr10.nnic@RASSF4	transcript1482.chr10.nnic	protein_coding	44959725,44970165,44971773,44982521,44983896,44984813,44989274,44989670,44990948,44991905,44993269	44959866,44970264,44971848,44982663,44984113,44984970,44989375,44989721,44991069,44992002,44994707	Gene ID= ENSG00000107551.20 TPM= 2.39 Transcript Type= NA
chr10	44959725	44994707	44959725	44994707	+	transcript1484.chr10.nic@RASSF4	transcript1484.chr10.nic	protein_coding	44959725,44970165,44971773,44982521,44983941,44984813,44989274,44989670,44990948,44991905,44993269	44959866,44970264,44971848,44982663,44984113,44984970,44989375,44989721,44991069,44992002,44994707	Gene ID= ENSG00000107551.20 TPM= 17.26 Transcript Type= NA
chr10	44959725	44994710	44959725	44994710	+	transcript1489.chr10.nic@RASSF4	transcript1489.chr10.nic	protein_coding	44959725,44970165,44971773,44982521,44984022,44984813,44989274,44989670,44990948,44991905	44959866,44970264,44971848,44982663,44984113,44984970,44989375,44989721,44991069,44994710	Gene ID= ENSG00000107551.20 TPM= 6.64 Transcript Type= NA
chr10	44959407	44994707	44959407	44994707	+	ENST00000489171.5@RASSF4	ENST00000489171.5	protein_coding	44959407,44970165,44982521,44984022,44984813,44989274,44989670,44990948,44991905,44993269	44959866,44971848,44982663,44984113,44984970,44989375,44989721,44991069,44992002,44994707	Gene ID= ENSG00000107551.20 TPM= 6.37 Transcript Type= retained_intron
chr10	44959792	44995891	44959792	44995891	+	ENST00000340258.9@RASSF4	ENST00000340258.9	protein_coding	44959792,44970165,44971773,44982521,44984022,44984813,44989274,44989670,44990948,44991905,44993269	44959866,44970264,44971848,44982663,44984113,44984970,44989375,44989721,44991069,44992002,44995891	Gene ID= ENSG00000107551.20 TPM= 1.33 Transcript Type= protein_coding
chr10	44976129	44978810	44976129	44978810	-	ENST00000298295.3@C10orf10	ENST00000298295.3	protein_coding	44978618,44976129	44978810,44978055	Gene ID= ENSG00000165507.8 TPM= 45.67 Transcript Type= protein_coding
chr10	45000475	45005326	45000475	45005326	+	ENST00000298299.3@ZNF22	ENST00000298299.3	protein_coding	45000475,45003280	45000978,45005326	Gene ID= ENSG00000165512.4 TPM= 44.61 Transcript Type= protein_coding
chr10	45374227	45446115	45374227	45446115	+	ENST00000374391.6@ALOX5	ENST00000374391.6	protein_coding	45374227,45382483,45395855,45412191,45424041,45424960,45428618,45440430,45441344,45443038,45443416,45443728,45444116,45445508	45374429,45382681,45395936,45412313,45424147,45425132,45428764,45440633,45441430,45443216,45443537,45443828,45444286,45446115	Gene ID= ENSG00000012779.10 TPM= 9.56 Transcript Type= protein_coding
chr10	45454593	45594906	45454593	45594906	-	ENST00000319836.7@MARCH8	ENST00000319836.7	protein_coding	45594235,45533110,45489367,45464239,45461231,45459120,45454593	45594906,45533289,45489417,45464327,45461411,45459267,45458543	Gene ID= ENSG00000165406.15 TPM= 19.12 Transcript Type= protein_coding
chr10	45638645	45672785	45638645	45672785	-	transcript1520.chr10.nic@ZFAND4	transcript1520.chr10.nic	protein_coding	45672250,45663542,45652984,45651966,45648294,45638645	45672785,45663842,45653059,45652033,45648534,45639963	Gene ID= ENSG00000172671.19 TPM= 3.19 Transcript Type= NA
chr10	45727208	45792961	45727208	45792961	+	transcript1538.chr10.nnic@WASHC2C	transcript1538.chr10.nnic	protein_coding	45727208,45727417,45728862,45737983,45740073,45743390,45744821,45746600,45750096,45750751,45751482,45752588,45753180,45754486,45754936,45757012,45763388,45765679,45769449,45773256,45777273,45778953,45784565,45784821,45785509,45786612,45787035,45788871,45790356,45792261	45727320,45727539,45729026,45738045,45740246,45743483,45744882,45746647,45750206,45750838,45751553,45752706,45753237,45754545,45755115,45757139,45763489,45765810,45769618,45773358,45777425,45779135,45784693,45784901,45785631,45786674,45787247,45789491,45790533,45792961	Gene ID= ENSG00000172661.17 TPM= 2.7 Transcript Type= NA
chr10	45727200	45792961	45727200	45792961	+	ENST00000540872.5@WASHC2C	ENST00000540872.5	protein_coding	45727200,45727417,45728862,45737983,45740073,45743390,45744821,45746600,45750096,45750751,45751482,45752588,45753180,45754486,45754936,45757012,45759315,45763388,45765679,45769449,45773256,45777273,45778953,45784565,45784821,45787035,45788871,45790356,45792261	45727320,45727539,45729026,45738045,45740246,45743483,45744882,45746647,45750206,45750838,45751553,45752706,45753237,45754545,45755115,45757139,45759401,45763489,45765810,45769618,45773358,45777425,45779135,45784693,45784901,45787247,45789491,45790533,45792961	Gene ID= ENSG00000172661.17 TPM= 13.32 Transcript Type= protein_coding
chr10	45727208	45792961	45727208	45792961	+	transcript1541.chr10.nnic@WASHC2C	transcript1541.chr10.nnic	protein_coding	45727208,45727417,45728862,45737983,45740073,45743390,45744821,45746600,45750096,45750751,45751482,45752588,45753180,45754486,45754936,45757012,45763388,45765679,45769449,45773256,45777273,45778953,45784565,45784821,45785509,45787035,45788871,45790356,45792261	45727320,45727539,45729026,45738045,45740246,45743483,45744882,45746647,45750206,45750838,45751553,45752706,45753237,45754545,45755115,45757139,45763489,45765810,45769618,45773358,45777425,45779135,45784693,45784901,45785631,45787247,45789491,45790533,45792961	Gene ID= ENSG00000172661.17 TPM= 3.05 Transcript Type= NA
chr10	45727208	45792961	45727208	45792961	+	transcript1543.chr10.nic@WASHC2C	transcript1543.chr10.nic	protein_coding	45727208,45727417,45728862,45737983,45740073,45743390,45744821,45746600,45750096,45750751,45752588,45753180,45754486,45754936,45757012,45759315,45763388,45765679,45769449,45773256,45777273,45778953,45784565,45784821,45785509,45787035,45788871,45790356,45792261	45727320,45727539,45729026,45738045,45740246,45743483,45744882,45746647,45750206,45750838,45752706,45753237,45754545,45755115,45757139,45759401,45763489,45765810,45769618,45773358,45777425,45779135,45784693,45784901,45785631,45787247,45789491,45790533,45792961	Gene ID= ENSG00000172661.17 TPM= 3.85 Transcript Type= NA
chr10	45727208	45792961	45727208	45792961	+	transcript1547.chr10.nnic@WASHC2C	transcript1547.chr10.nnic	protein_coding	45727208,45727417,45728862,45737983,45740073,45743390,45744821,45746600,45750096,45750751,45752588,45753180,45754486,45754936,45757012,45759315,45763388,45765679,45769449,45773256,45777273,45778953,45784565,45787035,45788871,45790356,45792261	45727320,45727539,45729026,45738045,45740246,45743483,45744882,45746647,45750206,45750838,45752706,45753237,45754545,45755115,45757139,45759401,45763489,45765810,45769618,45773358,45777425,45779135,45784693,45787247,45789491,45790533,45792961	Gene ID= ENSG00000172661.17 TPM= 2.43 Transcript Type= NA
chr10	45727219	45792961	45727219	45792961	+	ENST00000374362.6@WASHC2C	ENST00000374362.6	protein_coding	45727219,45727417,45728862,45737983,45740073,45743390,45744821,45746600,45750096,45750751,45751482,45752588,45753180,45754486,45754936,45757012,45759315,45763388,45765679,45769449,45773256,45777273,45778953,45784565,45784821,45785509,45787035,45788871,45790356,45792261	45727320,45727539,45729026,45738045,45740246,45743483,45744882,45746647,45750206,45750838,45751553,45752706,45753237,45754545,45755115,45757139,45759401,45763489,45765810,45769618,45773358,45777425,45779135,45784693,45784901,45785631,45787247,45789491,45790533,45792961	Gene ID= ENSG00000172661.17 TPM= 21.11 Transcript Type= protein_coding
chr10	45727236	45792961	45727236	45792961	+	ENST00000336378.8@WASHC2C	ENST00000336378.8	protein_coding	45727236,45727417,45728862,45737983,45740073,45743390,45744821,45746600,45750096,45750751,45751482,45752588,45753180,45754486,45754936,45757010,45759315,45763388,45765679,45769449,45773256,45777273,45778953,45784565,45784821,45785509,45786612,45787035,45788871,45790356,45792261	45727320,45727539,45729026,45738045,45740246,45743483,45744882,45746647,45750206,45750838,45751553,45752706,45753237,45754545,45755113,45757139,45759401,45763489,45765810,45769618,45773358,45777425,45779135,45784693,45784901,45785631,45786674,45787247,45789491,45790533,45792961	Gene ID= ENSG00000172661.17 TPM= 1.37 Transcript Type= protein_coding
chr10	45825602	45847757	45825602	45847757	-	ENST00000616763.4@AGAP4	ENST00000616763.4	protein_coding	45847125,45846689,45844326,45841653,45834016,45831394,45828029,45825602	45847757,45846755,45844396,45841687,45834116,45831429,45828080,45827390	Gene ID= ENSG00000188234.13 TPM= 20.18 Transcript Type= protein_coding
chr10	45972449	46003734	45972449	46003734	+	ENST00000580018.3@TIMM23	ENST00000580018.3	protein_coding	45972449,45975454,45982523,45982846,45985383,45988737,46003203	45972730,45975512,45982616,45982930,45985441,45988847,46003734	Gene ID= ENSG00000265354.3 TPM= 91.35 Transcript Type= protein_coding
chr10	45991688	45993669	45991688	45993669	+	transcript1575.chr10.nnic@NA	transcript1575.chr10.nnic	NA	45991688	45993669	Gene ID= novel_gene_chr10_1576 TPM= 2.12 Transcript Type= NA
chr10	46005088	46023455	46005088	46023455	-	ENST00000585132.5@NCOA4	ENST00000585132.5	protein_coding	46023330,46016540,46015126,46014854,46014444,46013550,46012883,46010223,46009411,46005088	46023455,46016694,46015266,46014942,46014552,46013639,46013026,46011206,46009551,46006597	Gene ID= ENSG00000266412.5 TPM= 51.11 Transcript Type= protein_coding
chr10	46005091	46030714	46005091	46030714	-	ENST00000581486.5@NCOA4	ENST00000581486.5	protein_coding	46030526,46016540,46015126,46014854,46014444,46013550,46012883,46010223,46009411,46005091	46030714,46016694,46015266,46014942,46014552,46013639,46013026,46011206,46009551,46006597	Gene ID= ENSG00000266412.5 TPM= 305.5 Transcript Type= protein_coding
chr10	46005091	46030668	46005091	46030668	-	transcript1565.chr10.nic@NCOA4	transcript1565.chr10.nic	protein_coding	46030526,46015126,46014854,46014444,46013550,46012883,46010223,46009411,46005091	46030668,46015266,46014942,46014552,46013639,46013026,46011206,46009551,46006597	Gene ID= ENSG00000266412.5 TPM= 22.07 Transcript Type= NA
chr10	46006427	46030615	46006427	46030615	-	ENST00000579039.2@NCOA4	ENST00000579039.2	protein_coding	46030526,46027432,46016540,46015126,46014854,46014444,46013550,46012883,46010223,46009411,46006427	46030615,46027528,46016694,46015266,46014942,46014552,46013639,46013026,46011206,46009551,46006597	Gene ID= ENSG00000266412.5 TPM= 1.46 Transcript Type= protein_coding
chr10	46911428	47002322	46911428	47002322	+	ENST00000395722.7@PTPN20	ENST00000395722.7	protein_coding	46911428,46943918,46946563,46999912,47000676	46911501,46944015,46946675,46999974,47002322	Gene ID= ENSG00000204179.10 TPM= 9.03 Transcript Type= protein_coding
chr10	46911396	47002322	46911396	47002322	+	ENST00000374342.6@PTPN20	ENST00000374342.6	protein_coding	46911396,46946563,46999912,47000676	46911501,46946675,46999974,47002322	Gene ID= ENSG00000204179.10 TPM= 3.72 Transcript Type= protein_coding
chr10	47548601	47553505	47548601	47553505	-	transcript1596.chr10.nic@AL591684.2	transcript1596.chr10.nic	processed_transcript	47551744,47550658,47548601	47553505,47550847,47549384	Gene ID= ENSG00000254929.6 TPM= 4.25 Transcript Type= NA
chr10	48009873	48031599	48009873	48031599	-	ENST00000585227.6@AGAP12P	ENST00000585227.6	transcribed_unprocessed_pseudogene	48031376,48030938,48028572,48025897,48018268,48015647,48012276,48009873	48031599,48031006,48028640,48025931,48018368,48015682,48012327,48011645	Gene ID= ENSG00000265018.6 TPM= 16.99 Transcript Type= transcribed_unprocessed_pseudogene
chr10	49014245	49115509	49014245	49115509	-	ENST00000332853.8@VSTM4	ENST00000332853.8	protein_coding	49115431,49107594,49085955,49077219,49064703,49048478,49046983,49014245	49115509,49107995,49086023,49077326,49064736,49048584,49047044,49019775	Gene ID= ENSG00000165633.12 TPM= 6.37 Transcript Type= protein_coding
chr10	49032940	49035594	49032940	49035594	-	transcript1616.chr10.nnic@NA	transcript1616.chr10.nnic	NA	49032940	49035594	Gene ID= novel_gene_chr10_1617 TPM= 2.12 Transcript Type= NA
chr10	49297032	49325261	49297032	49325261	+	transcript1628.chr10.nnic@C10orf71	transcript1628.chr10.nnic	protein_coding	49297032,49316145,49322400	49297153,49316247,49325261	Gene ID= ENSG00000177354.11 TPM= 3.19 Transcript Type= NA
chr10	49298807	49327161	49298807	49327161	+	transcript1629.chr10.nnic@C10orf71	transcript1629.chr10.nnic	protein_coding	49298807,49316137,49322400	49299225,49316247,49327161	Gene ID= ENSG00000177354.11 TPM= 45.67 Transcript Type= NA
chr10	49299206	49327477	49299206	49327477	+	transcript1634.chr10.nnic@C10orf71	transcript1634.chr10.nnic	protein_coding	49299206,49316145,49322400	49299289,49316247,49327477	Gene ID= ENSG00000177354.11 TPM= 3.19 Transcript Type= NA
chr10	49299165	49316247	49299165	49316247	+	transcript1637.chr10.nic@C10orf71	transcript1637.chr10.nic	protein_coding	49299165,49316145	49299233,49316247	Gene ID= ENSG00000177354.11 TPM= 6.37 Transcript Type= NA
chr10	49299158	49319356	49299158	49319356	+	transcript1638.chr10.nic@C10orf71	transcript1638.chr10.nic	protein_coding	49299158,49316145	49299233,49319356	Gene ID= ENSG00000177354.11 TPM= 3.19 Transcript Type= NA
chr10	49299193	49327487	49299193	49327487	+	ENST00000374144.7@C10orf71	ENST00000374144.7	protein_coding	49299193,49316145,49322402	49299233,49316247,49327487	Gene ID= ENSG00000177354.11 TPM= 159.32 Transcript Type= protein_coding
chr10	49310368	49312932	49310368	49312932	+	transcript1645.chr10.nnic@NA	transcript1645.chr10.nnic	NA	49310368	49312932	Gene ID= novel_gene_chr10_1646 TPM= 2.12 Transcript Type= NA
chr10	49326225	49330144	49326225	49330144	+	transcript1643.chr10.nnic@NA	transcript1643.chr10.nnic	NA	49326225	49330144	Gene ID= novel_gene_chr10_1644 TPM= 38.24 Transcript Type= NA
chr10	49515201	49539040	49515201	49539040	-	transcript1653.chr10.nnic@ERCC6	transcript1653.chr10.nnic	protein_coding	49538962,49532543,49530720,49528417,49515201	49539040,49532978,49530840,49528525,49517121	Gene ID= ENSG00000225830.12 TPM= 2.12 Transcript Type= NA
chr10	49515201	49539040	49515201	49539040	-	ENST00000447839.6@ERCC6	ENST00000447839.6	protein_coding	49538962,49532543,49530720,49528417,49524033,49515201	49539040,49532978,49530840,49528525,49524777,49517121	Gene ID= ENSG00000225830.12 TPM= 7.44 Transcript Type= protein_coding
chr10	49734644	49762379	49734644	49762379	-	ENST00000419399.4@OGDHL	ENST00000419399.4	protein_coding	49762239,49758389,49752638,49752133,49751827,49750839,49749726,49747029,49746750,49745798,49745344,49744650,49743994,49742828,49740710,49739661,49738191,49737947,49737786,49736357,49736023,49734644	49762379,49758593,49752740,49752248,49751981,49750985,49749816,49747208,49746878,49745977,49745496,49744752,49744122,49742978,49740837,49739839,49738262,49738072,49737858,49736520,49736177,49735351	Gene ID= ENSG00000197444.9 TPM= 3.72 Transcript Type= protein_coding
chr10	49734643	49762323	49734643	49762323	-	ENST00000374103.8@OGDHL	ENST00000374103.8	protein_coding	49762239,49758389,49756776,49752638,49752133,49751827,49750839,49749726,49747029,49746750,49745798,49745344,49744650,49743994,49742828,49740710,49739661,49738191,49737947,49737786,49736357,49736023,49734643	49762323,49758593,49756946,49752740,49752248,49751981,49750985,49749816,49747208,49746878,49745977,49745496,49744752,49744122,49742978,49740837,49739839,49738262,49738072,49737858,49736520,49736177,49735351	Gene ID= ENSG00000197444.9 TPM= 21.77 Transcript Type= protein_coding
chr10	49818279	49942009	49818279	49942009	-	transcript1659.chr10.nnic@PARG	transcript1659.chr10.nnic	protein_coding	49941509,49935076,49933177,49932096,49922547,49922336,49915917,49885203,49879673,49869476,49865321,49861588,49857306,49843554,49841950,49832803,49820165,49818279	49942009,49935142,49934163,49932283,49922669,49922419,49915991,49885295,49879830,49869555,49865381,49861663,49857453,49843632,49842058,49832908,49820293,49819494	Gene ID= ENSG00000227345.8 TPM= 8.5 Transcript Type= NA
chr10	49818279	49942023	49818279	49942023	-	transcript1660.chr10.nnic@PARG	transcript1660.chr10.nnic	protein_coding	49941935,49935076,49933177,49932096,49922547,49922336,49915917,49885203,49879673,49869476,49865321,49861588,49857306,49843554,49841950,49832803,49820165,49818279	49942023,49935142,49934163,49932283,49922669,49922419,49915991,49885295,49879830,49869555,49865381,49861663,49857453,49843632,49842058,49832908,49820293,49819494	Gene ID= ENSG00000227345.8 TPM= 3.19 Transcript Type= NA
chr10	49818279	49941998	49818279	49941998	-	transcript1664.chr10.nnic@PARG	transcript1664.chr10.nnic	protein_coding	49941509,49933177,49932096,49922547,49922336,49915917,49885203,49879673,49869476,49865321,49861588,49857306,49843554,49841950,49832803,49820165,49818279	49941998,49934163,49932283,49922669,49922419,49915991,49885295,49879830,49869555,49865381,49861663,49857453,49843632,49842058,49832908,49820293,49819494	Gene ID= ENSG00000227345.8 TPM= 3.19 Transcript Type= NA
chr10	49942033	49973477	49942033	49973477	+	ENST00000374098.6@TIMM23B	ENST00000374098.6	protein_coding	49942033,49945032,49952126,49952449,49955002,49958370,49973012	49942300,49945090,49952219,49952533,49955060,49958480,49973477	Gene ID= ENSG00000204152.10 TPM= 1.06 Transcript Type= protein_coding
chr10	49960212	49960680	49960212	49960680	-	transcript1678.chr10.nnic@NA	transcript1678.chr10.nnic	NA	49960212	49960680	Gene ID= novel_gene_chr10_1679 TPM= 4.25 Transcript Type= NA
chr10	49963838	49964796	49963838	49964796	+	transcript1676.chr10.nnic@NA	transcript1676.chr10.nnic	NA	49963838	49964796	Gene ID= novel_gene_chr10_1677 TPM= 2.12 Transcript Type= NA
chr10	49981421	49983583	49981421	49983583	-	transcript1683.chr10.nnic@NA	transcript1683.chr10.nnic	NA	49981421	49983583	Gene ID= novel_gene_chr10_1684 TPM= 4.25 Transcript Type= NA
chr10	50067888	50133506	50067888	50133506	+	ENST00000351071.10@WASHC2A	ENST00000351071.10	protein_coding	50067888,50068105,50069547,50078675,50080758,50084072,50085497,50087275,50090776,50091431,50092162,50093268,50093860,50095148,50095599,50097675,50099978,50104042,50106334,50110101,50113895,50117906,50119587,50125113,50125369,50126057,50127583,50129419,50130901,50132806	50068008,50068227,50069711,50078737,50080931,50084165,50085558,50087322,50090886,50091518,50092233,50093386,50093917,50095207,50095778,50097802,50100064,50104143,50106465,50110270,50113997,50118058,50119769,50125241,50125449,50126179,50127795,50130039,50131078,50133506	Gene ID= ENSG00000099290.15 TPM= 16.28 Transcript Type= protein_coding
chr10	50067888	50133506	50067888	50133506	+	ENST00000314664.11@WASHC2A	ENST00000314664.11	protein_coding	50067888,50068105,50069547,50078675,50080758,50084072,50085497,50087275,50090776,50091431,50092162,50093268,50093860,50095148,50095599,50097675,50099978,50104042,50106334,50110101,50113895,50117906,50119587,50125113,50125369,50127583,50129419,50130901,50132806	50068008,50068227,50069711,50078737,50080931,50084165,50085558,50087322,50090886,50091518,50092233,50093386,50093917,50095207,50095778,50097802,50100064,50104143,50106465,50110270,50113997,50118058,50119769,50125241,50125449,50127795,50130039,50131078,50133506	Gene ID= ENSG00000099290.15 TPM= 7.79 Transcript Type= protein_coding
chr10	50067891	50133506	50067891	50133506	+	transcript1690.chr10.nic@WASHC2A	transcript1690.chr10.nic	protein_coding	50067891,50068105,50069547,50078675,50080758,50084072,50085497,50087275,50090776,50091431,50093268,50093860,50095148,50095599,50097675,50099978,50104042,50106334,50110101,50113895,50117906,50119587,50125113,50125369,50126057,50127583,50129419,50130901,50132806	50068008,50068227,50069711,50078737,50080931,50084165,50085558,50087322,50090886,50091518,50093386,50093917,50095207,50095778,50097802,50100064,50104143,50106465,50110270,50113997,50118058,50119769,50125241,50125449,50126179,50127795,50130039,50131078,50133506	Gene ID= ENSG00000099290.15 TPM= 3.19 Transcript Type= NA
chr10	50067891	50133506	50067891	50133506	+	transcript1691.chr10.nnic@WASHC2A	transcript1691.chr10.nnic	protein_coding	50067891,50068105,50069547,50078675,50080758,50084072,50085497,50087275,50090776,50091431,50092162,50093268,50093860,50095148,50095599,50097675,50104042,50106334,50110101,50113895,50117906,50119587,50125113,50125369,50127583,50129419,50130901,50132806	50068008,50068227,50069711,50078737,50080931,50084165,50085558,50087322,50090886,50091518,50092233,50093386,50093917,50095207,50095778,50097802,50104143,50106465,50110270,50113997,50118058,50119769,50125241,50125449,50127795,50130039,50131078,50133506	Gene ID= ENSG00000099290.15 TPM= 3.54 Transcript Type= NA
chr10	50305600	50623983	50305600	50623983	-	ENST00000361781.6@SGMS1	ENST00000361781.6	protein_coding	50623707,50590153,50519831,50466890,50460673,50433476,50343492,50327205,50311262,50307982,50305600	50623983,50590247,50519921,50466932,50460814,50433556,50344345,50327322,50311415,50308148,50307321	Gene ID= ENSG00000198964.13 TPM= 6.37 Transcript Type= protein_coding
chr10	50305720	50625216	50305720	50625216	-	transcript1697.chr10.nic@SGMS1	transcript1697.chr10.nic	protein_coding	50624920,50590153,50519831,50466890,50460673,50433476,50343492,50327205,50311262,50307982,50305720	50625216,50590247,50519921,50466932,50460814,50433556,50344345,50327322,50311415,50308148,50307321	Gene ID= ENSG00000198964.13 TPM= 3.19 Transcript Type= NA
chr10	50325649	50357927	50325649	50357927	+	transcript1714.chr10.nnic@AC069547.1	transcript1714.chr10.nnic	TEC	50325649,50338764,50357806	50325964,50338882,50357927	Gene ID= ENSG00000279863.1 TPM= 2.12 Transcript Type= NA
chr10	50363254	50365276	50363254	50365276	+	transcript1722.chr10.nnic@NA	transcript1722.chr10.nnic	NA	50363254	50365276	Gene ID= novel_gene_chr10_1723 TPM= 6.37 Transcript Type= NA
chr10	50655841	50660249	50655841	50660249	-	transcript1724.chr10.nnic@NA	transcript1724.chr10.nnic	NA	50655841	50660249	Gene ID= novel_gene_chr10_1725 TPM= 3.19 Transcript Type= NA
chr10	50739318	50757188	50739318	50757188	+	ENST00000374007.5@ASAH2B	ENST00000374007.5	protein_coding	50739318,50742915,50745128,50749343,50752468,50754551	50740002,50743010,50745274,50749402,50752556,50757188	Gene ID= ENSG00000204147.9 TPM= 4.25 Transcript Type= protein_coding
chr10	51074465	51153555	51074465	51153555	+	transcript1730.chr10.nic@PRKG1	transcript1730.chr10.nic	protein_coding	51074465,51153164	51074901,51153555	Gene ID= ENSG00000185532.15 TPM= 3.19 Transcript Type= NA
chr10	51228370	51229946	51228370	51229946	+	transcript1731.chr10.nnic@NA	transcript1731.chr10.nnic	NA	51228370	51229946	Gene ID= novel_gene_chr10_1732 TPM= 2.12 Transcript Type= NA
chr10	51695487	51699591	51695487	51699591	-	ENST00000331173.5@CSTF2T	ENST00000331173.5	protein_coding	51695487	51699591	Gene ID= ENSG00000177613.8 TPM= 2.12 Transcript Type= protein_coding
chr10	56357228	56361275	56357228	56361275	-	ENST00000373944.7@ZWINT	ENST00000373944.7	protein_coding	56361196,56360293,56360018,56359687,56359476,56358805,56358556,56358377,56357228	56361275,56360383,56360141,56359853,56359532,56358947,56358724,56358459,56358185	Gene ID= ENSG00000122952.16 TPM= 2.12 Transcript Type= protein_coding
chr10	58269058	58289586	58269058	58289586	+	ENST00000333926.5@CISD1	ENST00000333926.5	protein_coding	58269058,58277117,58287561	58269304,58277322,58289586	Gene ID= ENSG00000122873.11 TPM= 104.09 Transcript Type= protein_coding
chr10	58334975	58370753	58334975	58370753	+	ENST00000373910.8@UBE2D1	ENST00000373910.8	protein_coding	58334975,58361338,58361495,58363609,58364771,58367923,58368720	58335225,58361401,58361526,58363686,58364876,58368016,58370753	Gene ID= ENSG00000072401.14 TPM= 55.23 Transcript Type= protein_coding
chr10	58334979	58370751	58334979	58370751	+	ENST00000615793.1@UBE2D1	ENST00000615793.1	protein_coding	58334979,58361338,58363609,58364771,58367923,58368720	58335225,58361401,58363686,58364876,58368016,58370751	Gene ID= ENSG00000072401.14 TPM= 2.12 Transcript Type= protein_coding
chr10	58385022	58399221	58385022	58399221	+	ENST00000487519.5@TFAM	ENST00000487519.5	protein_coding	58385022,58386220,58388190,58388670,58390765,58394358,58394928	58385648,58386338,58388260,58388819,58390860,58394414,58399221	Gene ID= ENSG00000108064.10 TPM= 3.19 Transcript Type= protein_coding
chr10	58999626	59001543	58999626	59001543	+	ENST00000432535.1@LINC00844	ENST00000432535.1	lincRNA	58999626,59001229	58999787,59001543	Gene ID= ENSG00000237949.1 TPM= 2.12 Transcript Type= lincRNA
chr10	59247567	59362903	59247567	59362903	-	ENST00000468840.6@FAM13C	ENST00000468840.6	protein_coding	59362576,59362399,59355887,59352270,59323988,59302801,59283363,59269899,59268553,59264085,59262434,59254348,59252799,59251575,59247567	59362903,59362437,59355943,59352474,59324106,59302864,59283447,59270109,59268691,59264166,59262645,59254443,59252998,59251676,59247737	Gene ID= ENSG00000148541.12 TPM= 1.06 Transcript Type= protein_coding
chr10	59246179	59362594	59246179	59362594	-	ENST00000611933.4@FAM13C	ENST00000611933.4	protein_coding	59362399,59355887,59352270,59323988,59302801,59283363,59269899,59268553,59254348,59252799,59251575,59246179	59362594,59355943,59352474,59324106,59302864,59283447,59270109,59268691,59254443,59252998,59251676,59247737	Gene ID= ENSG00000148541.12 TPM= 1.06 Transcript Type= protein_coding
chr10	59299512	59362578	59299512	59362578	-	transcript1775.chr10.nic@FAM13C	transcript1775.chr10.nic	protein_coding	59362399,59355887,59352270,59323988,59299512	59362578,59355943,59352474,59324106,59302864	Gene ID= ENSG00000148541.12 TPM= 2.12 Transcript Type= NA
chr10	59246129	59362550	59246129	59362550	-	ENST00000618804.4@FAM13C	ENST00000618804.4	protein_coding	59362399,59355887,59352270,59323988,59302801,59283363,59269899,59268553,59264085,59262434,59254348,59252799,59251575,59246129	59362550,59355943,59352474,59324106,59302864,59283447,59270109,59268691,59264166,59262645,59254443,59252998,59251676,59247737	Gene ID= ENSG00000148541.12 TPM= 2.12 Transcript Type= protein_coding
chr10	59650761	59710079	59650761	59710079	-	ENST00000395348.7@SLC16A9	ENST00000395348.7	protein_coding	59709479,59684096,59672770,59664227,59653675,59650761	59710079,59684327,59672913,59664322,59654589,59652950	Gene ID= ENSG00000165449.11 TPM= 1.06 Transcript Type= protein_coding
chr10	60029691	60141012	60029691	60141012	-	transcript1785.chr10.nic@ANK3	transcript1785.chr10.nic	protein_coding	60140352,60138964,60137342,60134271,60114225,60108830,60105905,60088147,60086677,60085157,60084602,60083492,60082615,60080573,60067935,60064157,60063111,60059698,60059340,60055658,60042672,60029691	60141012,60139087,60137353,60134358,60114331,60109054,60106059,60088358,60086884,60085253,60084830,60083617,60082737,60080618,60068009,60064288,60063254,60060006,60059430,60056036,60042759,60029826	Gene ID= ENSG00000151150.21 TPM= 4.25 Transcript Type= NA
chr10	60869438	60944247	60869438	60944247	-	ENST00000337910.9@RHOBTB1	ENST00000337910.9	protein_coding	60943971,60941804,60911351,60910887,60892810,60888212,60886112,60877908,60874954,60872185,60869438	60944247,60941854,60911552,60910990,60892995,60889185,60886230,60878058,60875042,60872290,60871651	Gene ID= ENSG00000072422.16 TPM= 14.87 Transcript Type= protein_coding
chr10	60944399	60945264	60944399	60945264	+	transcript1802.chr10.nnic@NA	transcript1802.chr10.nnic	NA	60944399,60945023	60944631,60945264	Gene ID= novel_gene_chr10_1803 TPM= 2.12 Transcript Type= NA
chr10	62049211	62093064	62049211	62093064	+	ENST00000309334.5@ARID5B	ENST00000309334.5	protein_coding	62049211,62050888,62057117,62059243,62069700,62085702,62090862	62049483,62051000,62057318,62059295,62069797,62085900,62093064	Gene ID= ENSG00000150347.14 TPM= 12.75 Transcript Type= protein_coding
chr10	62049228	62054404	62049228	62054404	+	transcript1809.chr10.nic@ARID5B	transcript1809.chr10.nic	protein_coding	62049228,62050888	62049483,62054404	Gene ID= ENSG00000150347.14 TPM= 8.5 Transcript Type= NA
chr10	62068534	62070478	62068534	62070478	-	transcript1810.chr10.nnic@NA	transcript1810.chr10.nnic	NA	62068534	62070478	Gene ID= novel_gene_chr10_1811 TPM= 2.12 Transcript Type= NA
chr10	62804857	62808483	62804857	62808483	+	ENST00000373783.2@ADO	ENST00000373783.2	protein_coding	62804857	62808483	Gene ID= ENSG00000181915.4 TPM= 5.31 Transcript Type= protein_coding
chr10	63133290	63155026	63133290	63155026	+	ENST00000277746.10@NRBF2	ENST00000277746.10	protein_coding	63133290,63146209,63152150,63153511	63133500,63146293,63152190,63155026	Gene ID= ENSG00000148572.15 TPM= 27.62 Transcript Type= protein_coding
chr10	63172874	63173727	63172874	63173727	+	transcript1820.chr10.nnic@NA	transcript1820.chr10.nnic	NA	63172874	63173727	Gene ID= novel_gene_chr10_1821 TPM= 2.12 Transcript Type= NA
chr10	63239015	63239499	63239015	63239499	+	transcript1843.chr10.nnic@NA	transcript1843.chr10.nnic	NA	63239015	63239499	Gene ID= novel_gene_chr10_1844 TPM= 2.12 Transcript Type= NA
chr10	63463984	63466017	63463984	63466017	-	transcript1849.chr10.nnic@NA	transcript1849.chr10.nnic	NA	63463984	63466017	Gene ID= novel_gene_chr10_1850 TPM= 2.12 Transcript Type= NA
chr10	63518445	63520519	63518445	63520519	+	transcript1845.chr10.nnic@NA	transcript1845.chr10.nnic	NA	63518445	63520519	Gene ID= novel_gene_chr10_1846 TPM= 2.12 Transcript Type= NA
chr10	63521353	63610291	63521353	63610291	+	transcript1839.chr10.nic@REEP3	transcript1839.chr10.nic	protein_coding	63521353,63566338,63594778,63598024,63599170,63610187	63521577,63566410,63594854,63598144,63599283,63610291	Gene ID= ENSG00000165476.13 TPM= 2.12 Transcript Type= NA
chr10	65912518	67696169	65912518	67696169	-	ENST00000433211.6@CTNNA3	ENST00000433211.6	protein_coding	67696000,67647415,67606857,67539503,67521842,67219607,67180317,66775444,66766264,66621692,66520617,66379152,66280470,66103157,66069308,65988692,65966612,65912518	67696169,67647518,67607049,67539669,67521961,67219870,67180520,66775524,66766416,66621784,66520773,66379352,66280621,66103249,66069489,65988797,65966746,65920617	Gene ID= ENSG00000183230.16 TPM= 28.68 Transcript Type= protein_coding
chr10	66520246	66775524	66520246	66775524	-	transcript1857.chr10.nic@CTNNA3	transcript1857.chr10.nic	protein_coding	66775444,66766264,66621692,66520246	66775524,66766416,66621784,66520773	Gene ID= ENSG00000183230.16 TPM= 2.12 Transcript Type= NA
chr10	66929072	66931209	66929072	66931209	+	transcript1862.chr10.nnic@NA	transcript1862.chr10.nnic	NA	66929072	66931209	Gene ID= novel_gene_chr10_1863 TPM= 7.44 Transcript Type= NA
chr10	66956457	66958332	66956457	66958332	+	transcript1864.chr10.nnic@NA	transcript1864.chr10.nnic	NA	66956457	66958332	Gene ID= novel_gene_chr10_1865 TPM= 5.31 Transcript Type= NA
chr10	66975621	66978551	66975621	66978551	+	transcript1860.chr10.nnic@NA	transcript1860.chr10.nnic	NA	66975621	66978551	Gene ID= novel_gene_chr10_1861 TPM= 11.68 Transcript Type= NA
chr10	67043137	67045571	67043137	67045571	-	transcript1879.chr10.nnic@NA	transcript1879.chr10.nnic	NA	67043137	67045571	Gene ID= novel_gene_chr10_1880 TPM= 2.12 Transcript Type= NA
chr10	67071332	67072754	67071332	67072754	-	transcript1881.chr10.nnic@NA	transcript1881.chr10.nnic	NA	67071332	67072754	Gene ID= novel_gene_chr10_1882 TPM= 2.12 Transcript Type= NA
chr10	67072311	67074009	67072311	67074009	-	transcript1885.chr10.nnic@NA	transcript1885.chr10.nnic	NA	67072311	67074009	Gene ID= novel_gene_chr10_1886 TPM= 2.12 Transcript Type= NA
chr10	67119685	67122006	67119685	67122006	+	transcript1873.chr10.nnic@NA	transcript1873.chr10.nnic	NA	67119685	67122006	Gene ID= novel_gene_chr10_1874 TPM= 40.36 Transcript Type= NA
chr10	67132499	67133208	67132499	67133208	+	transcript1871.chr10.nnic@NA	transcript1871.chr10.nnic	NA	67132499	67133208	Gene ID= novel_gene_chr10_1872 TPM= 7.44 Transcript Type= NA
chr10	67142603	67143445	67142603	67143445	+	transcript1875.chr10.nnic@NA	transcript1875.chr10.nnic	NA	67142603	67143445	Gene ID= novel_gene_chr10_1876 TPM= 22.31 Transcript Type= NA
chr10	67145438	67148359	67145438	67148359	-	transcript1883.chr10.nnic@NA	transcript1883.chr10.nnic	NA	67145438	67148359	Gene ID= novel_gene_chr10_1884 TPM= 2.12 Transcript Type= NA
chr10	67177762	67179512	67177762	67179512	+	transcript1877.chr10.nnic@NA	transcript1877.chr10.nnic	NA	67177762	67179512	Gene ID= novel_gene_chr10_1878 TPM= 10.62 Transcript Type= NA
chr10	67402453	67408898	67402453	67408898	+	transcript1889.chr10.nnic@NA	transcript1889.chr10.nnic	NA	67402453	67408898	Gene ID= novel_gene_chr10_1890 TPM= 16.99 Transcript Type= NA
chr10	67470957	67476211	67470957	67476211	-	transcript1899.chr10.nnic@NA	transcript1899.chr10.nnic	NA	67470957	67476211	Gene ID= novel_gene_chr10_1900 TPM= 2.12 Transcript Type= NA
chr10	67490573	67493223	67490573	67493223	+	transcript1891.chr10.nnic@NA	transcript1891.chr10.nnic	NA	67490573	67493223	Gene ID= novel_gene_chr10_1892 TPM= 2.12 Transcript Type= NA
chr10	67502148	67504458	67502148	67504458	+	transcript1893.chr10.nnic@NA	transcript1893.chr10.nnic	NA	67502148	67504458	Gene ID= novel_gene_chr10_1894 TPM= 4.25 Transcript Type= NA
chr10	67514722	67518433	67514722	67518433	-	transcript1897.chr10.nnic@NA	transcript1897.chr10.nnic	NA	67514722	67518433	Gene ID= novel_gene_chr10_1898 TPM= 2.12 Transcript Type= NA
chr10	67603093	67603613	67603093	67603613	+	transcript1895.chr10.nnic@NA	transcript1895.chr10.nnic	NA	67603093	67603613	Gene ID= novel_gene_chr10_1896 TPM= 2.12 Transcript Type= NA
chr10	67796665	67838164	67796665	67838164	-	ENST00000225171.6@DNAJC12	ENST00000225171.6	protein_coding	67837934,67823314,67811524,67805583,67796665	67838164,67823392,67811663,67805787,67797210	Gene ID= ENSG00000108176.14 TPM= 9.56 Transcript Type= protein_coding
chr10	67884669	67918390	67884669	67918390	+	ENST00000212015.10@SIRT1	ENST00000212015.10	protein_coding	67884669,67887417,67888882,67891402,67906790,67908046,67909256,67912474,67916265	67885151,67887533,67889123,67891554,67906937,67908125,67909442,67913031,67918390	Gene ID= ENSG00000096717.11 TPM= 16.99 Transcript Type= protein_coding
chr10	67922489	68075348	67922489	68075348	-	ENST00000373700.8@HERC4	ENST00000373700.8	protein_coding	68075144,68073657,68072883,68044404,68038093,68033965,68032778,68025546,68014026,67992606,67992199,67991140,67990904,67990211,67988663,67966683,67956878,67954963,67954595,67940939,67939588,67936153,67932597,67925085,67922489	68075348,68073686,68073186,68044563,68038169,68034186,68032869,68025676,68014186,67992682,67992323,67991199,67991015,67990400,67988835,67966802,67956976,67955130,67954738,67941105,67939654,67936235,67932780,67925187,67923139	Gene ID= ENSG00000148634.15 TPM= 16.28 Transcript Type= protein_coding
chr10	67966602	68075297	67966602	68075297	-	transcript1917.chr10.nic@HERC4	transcript1917.chr10.nic	protein_coding	68075144,68073657,68072883,68044404,68038093,68033965,68032778,68025546,68014026,67992606,67992199,67991140,67990904,67990211,67988663,67966602	68075297,68073686,68073186,68044563,68038169,68034186,68032869,68025676,68014186,67992682,67992323,67991199,67991015,67990400,67988835,67966802	Gene ID= ENSG00000148634.15 TPM= 2.47 Transcript Type= NA
chr10	67921908	68075283	67921908	68075283	-	ENST00000395198.7@HERC4	ENST00000395198.7	protein_coding	68075144,68073657,68072883,68044404,68038093,68033965,68032778,68025546,68014026,67992606,67992199,67991140,67990904,67990211,67988663,67966683,67959113,67956878,67954963,67954595,67940939,67939588,67936153,67932597,67925085,67921908	68075283,68073686,68073186,68044563,68038169,68034186,68032869,68025676,68014186,67992682,67992323,67991199,67991015,67990400,67988835,67966802,67959136,67956976,67955130,67954738,67941105,67939654,67936235,67932780,67925187,67923139	Gene ID= ENSG00000148634.15 TPM= 15.22 Transcript Type= protein_coding
chr10	68087882	68211699	68087882	68211699	+	transcript1925.chr10.nnic@MYPN	transcript1925.chr10.nnic	protein_coding	68087882,68093056,68142940,68145475,68148353,68150040,68158486,68161729,68165702,68166294,68174066,68175323,68188905,68194363,68195450,68197352,68199368,68201829,68206770,68210286	68087992,68093258,68143115,68145526,68148467,68150111,68158627,68161752,68165818,68166666,68174656,68175461,68189126,68194512,68195532,68197478,68199575,68201994,68206903,68211699	Gene ID= ENSG00000138347.15 TPM= 118.96 Transcript Type= NA
chr10	68130408	68132971	68130408	68132971	-	transcript1937.chr10.nnic@NA	transcript1937.chr10.nnic	NA	68130408	68132971	Gene ID= novel_gene_chr10_1938 TPM= 4.25 Transcript Type= NA
chr10	68196485	68198591	68196485	68198591	-	transcript1935.chr10.nnic@NA	transcript1935.chr10.nnic	NA	68196485	68198591	Gene ID= novel_gene_chr10_1936 TPM= 4.25 Transcript Type= NA
chr10	68212470	68213883	68212470	68213883	-	transcript1933.chr10.nnic@NA	transcript1933.chr10.nnic	NA	68212470	68213883	Gene ID= novel_gene_chr10_1934 TPM= 5.31 Transcript Type= NA
chr10	68213722	68216050	68213722	68216050	-	transcript1931.chr10.nnic@NA	transcript1931.chr10.nnic	NA	68213722	68216050	Gene ID= novel_gene_chr10_1932 TPM= 104.09 Transcript Type= NA
chr10	68221900	68223582	68221900	68223582	+	transcript1929.chr10.nnic@NA	transcript1929.chr10.nnic	NA	68221900	68223582	Gene ID= novel_gene_chr10_1930 TPM= 9.56 Transcript Type= NA
chr10	68282660	68332897	68282660	68332897	-	transcript1960.chr10.nnic@PBLD	transcript1960.chr10.nnic	protein_coding	68332784,68306761,68296886,68296266,68292129,68292010,68288931,68288483,68285348,68282660	68332897,68306906,68296985,68296364,68292238,68292039,68289019,68288661,68285385,68284289	Gene ID= ENSG00000108187.15 TPM= 5.31 Transcript Type= NA
chr10	68332065	68342273	68332065	68342273	+	transcript1946.chr10.nic@HNRNPH3	transcript1946.chr10.nic	protein_coding	68332065,68337199,68337858,68338503,68339140,68339440,68341174,68341585,68341759,68341978	68332235,68337333,68337996,68338642,68339226,68339555,68341309,68341680,68341851,68342273	Gene ID= ENSG00000096746.17 TPM= 7.79 Transcript Type= NA
chr10	68331971	68343191	68331971	68343191	+	transcript1952.chr10.nic@HNRNPH3	transcript1952.chr10.nic	protein_coding	68331971,68337199,68337858,68338503,68339140,68339440,68341174,68341585,68341759,68341978	68332235,68337333,68337996,68338687,68339226,68339555,68341309,68341680,68341851,68343191	Gene ID= ENSG00000096746.17 TPM= 28.41 Transcript Type= NA
chr10	68332064	68343191	68332064	68343191	+	transcript1964.chr10.nic@HNRNPH3	transcript1964.chr10.nic	protein_coding	68332064,68337199,68338503,68339140,68339440,68341174,68341585,68341759,68341978	68332235,68337333,68338687,68339226,68339555,68341309,68341680,68341851,68343191	Gene ID= ENSG00000096746.17 TPM= 5.58 Transcript Type= NA
chr10	68332075	68343187	68332075	68343187	+	ENST00000265866.11@HNRNPH3	ENST00000265866.11	protein_coding	68332075,68337199,68337858,68338503,68339140,68339440,68341174,68341585,68341759,68341978	68332216,68337333,68337996,68338687,68339226,68339555,68341309,68341680,68341851,68343187	Gene ID= ENSG00000096746.17 TPM= 43.28 Transcript Type= protein_coding
chr10	68332103	68339201	68332103	68339201	+	ENST00000486854.5@HNRNPH3	ENST00000486854.5	protein_coding	68332103,68337199,68337858,68338503,68339140	68332216,68337333,68337996,68338687,68339201	Gene ID= ENSG00000096746.17 TPM= 1.06 Transcript Type= processed_transcript
chr10	68332122	68342272	68332122	68342272	+	ENST00000354695.5@HNRNPH3	ENST00000354695.5	protein_coding	68332122,68337199,68337858,68338503,68339140,68339440,68341174,68341585,68341759,68341978	68332216,68337333,68337996,68338642,68339226,68339555,68341309,68341680,68341851,68342272	Gene ID= ENSG00000096746.17 TPM= 9.91 Transcript Type= protein_coding
chr10	68721144	68792375	68721144	68792375	+	ENST00000630771.2@CCAR1	ENST00000630771.2	protein_coding	68721144,68722455,68736876,68737845,68740629,68742376,68747161,68747374,68749136,68749524,68753852,68754714,68755370,68757294,68761007,68765888,68771206,68772988,68786136,68786546,68787927,68788143,68789710,68791207	68721282,68722577,68737048,68737889,68740661,68742569,68747275,68747566,68749265,68749685,68754077,68754827,68755536,68757377,68761192,68766079,68771445,68773099,68786218,68786692,68788047,68788328,68789915,68792375	Gene ID= ENSG00000060339.13 TPM= 1.41 Transcript Type= protein_coding
chr10	68721176	68771444	68721176	68771444	+	transcript1992.chr10.nic@CCAR1	transcript1992.chr10.nic	protein_coding	68721176,68722455,68736876,68737845,68740629,68742376,68747161,68747374,68749136,68749524,68753852,68754714,68755370,68756273,68757294,68761007,68765888,68771206	68721282,68722577,68737048,68737889,68740661,68742569,68747275,68747566,68749265,68749685,68754077,68754827,68755536,68756483,68757377,68761192,68766079,68771444	Gene ID= ENSG00000060339.13 TPM= 5.13 Transcript Type= NA
chr10	68721242	68771301	68721242	68771301	+	transcript1995.chr10.nic@CCAR1	transcript1995.chr10.nic	protein_coding	68721242,68722455,68736876,68740629,68742376,68747161,68747374,68749136,68749524,68753852,68754714,68755370,68756273,68757294,68761007,68765888,68771206	68721282,68722577,68737048,68740661,68742569,68747275,68747566,68749265,68749685,68754077,68754827,68755536,68756483,68757377,68761192,68766079,68771301	Gene ID= ENSG00000060339.13 TPM= 2.12 Transcript Type= NA
chr10	68763265	68764394	68763265	68764394	+	transcript2003.chr10.nnic@NA	transcript2003.chr10.nnic	NA	68763265	68764394	Gene ID= novel_gene_chr10_2004 TPM= 2.12 Transcript Type= NA
chr10	68901282	68946847	68901282	68946847	+	transcript2006.chr10.nic@DDX50	transcript2006.chr10.nic	protein_coding	68901282,68906226,68906711,68910307,68911068,68913162,68913391,68914059,68919832,68934199,68934799,68936006,68936936,68941060,68943213,68946352	68901471,68906337,68907007,68910382,68911246,68913279,68913576,68914204,68919981,68934360,68934918,68936079,68937095,68941194,68943257,68946847	Gene ID= ENSG00000107625.12 TPM= 2.12 Transcript Type= NA
chr10	68901278	68946847	68901278	68946847	+	ENST00000373585.7@DDX50	ENST00000373585.7	protein_coding	68901278,68906711,68910307,68911068,68913162,68913391,68914059,68919832,68934199,68934799,68936006,68936936,68941060,68943213,68946352	68901471,68907007,68910382,68911246,68913279,68913576,68914204,68919981,68934360,68934918,68936079,68937095,68941194,68943257,68946847	Gene ID= ENSG00000107625.12 TPM= 43.55 Transcript Type= protein_coding
chr10	68956128	68985073	68956128	68985073	+	ENST00000354185.8@DDX21	ENST00000354185.8	protein_coding	68956128,68959806,68962082,68963291,68965377,68967018,68968976,68970201,68971891,68973545,68974670,68977529,68978842,68981537,68982543	68956312,68960249,68962157,68963469,68965494,68967203,68969121,68970350,68972052,68973664,68974743,68977688,68978976,68981581,68985073	Gene ID= ENSG00000165732.12 TPM= 21.24 Transcript Type= protein_coding
chr10	68956440	68985067	68956440	68985067	+	ENST00000620315.1@DDX21	ENST00000620315.1	protein_coding	68956440,68959806,68962082,68963291,68965377,68967018,68968976,68970201,68971891,68973545,68974670,68977529,68978842,68981537,68982543	68956748,68960249,68962157,68963469,68965494,68967203,68969121,68970350,68972052,68973664,68974743,68977688,68978976,68981581,68985067	Gene ID= ENSG00000165732.12 TPM= 2.12 Transcript Type= protein_coding
chr10	68988721	69016982	68988721	69016982	+	ENST00000361983.6@KIF1BP	ENST00000361983.6	protein_coding	68988721,69000424,69005046,69005732,69008841,69010900,69015541	68989258,69000522,69005125,69005915,69008925,69011015,69016982	Gene ID= ENSG00000198954.7 TPM= 119.49 Transcript Type= protein_coding
chr10	68988750	69016929	68988750	69016929	+	ENST00000638119.1@KIF1BP	ENST00000638119.1	protein_coding	68988750,68995204,69000424,69005046,69005732,69008841,69010900,69015541	68989258,68995278,69000522,69005125,69005915,69008925,69011015,69016929	Gene ID= ENSG00000198954.7 TPM= 2.66 Transcript Type= protein_coding
chr10	69088118	69104811	69088118	69104811	+	ENST00000242465.3@SRGN	ENST00000242465.3	protein_coding	69088118,69097084,69103871	69088236,69097231,69104811	Gene ID= ENSG00000122862.4 TPM= 11.68 Transcript Type= protein_coding
chr10	69124200	69172856	69124200	69172856	+	transcript2027.chr10.nnic@VPS26A	transcript2027.chr10.nnic	protein_coding	69124200,69132898,69133532,69155812,69157007,69158047,69162406,69166042,69168489,69171156	69124280,69133047,69133637,69155887,69157163,69158211,69162512,69166110,69168631,69172856	Gene ID= ENSG00000122958.14 TPM= 3.45 Transcript Type= NA
chr10	69123512	69172861	69123512	69172861	+	ENST00000373382.5@VPS26A	ENST00000373382.5	protein_coding	69123512,69123660,69132898,69155812,69157007,69158047,69162406,69166042,69168489,69171156	69123546,69124280,69133047,69155887,69157163,69158211,69162512,69166110,69168631,69172861	Gene ID= ENSG00000122958.14 TPM= 47.53 Transcript Type= protein_coding
chr10	69124144	69172856	69124144	69172856	+	transcript2033.chr10.nic@VPS26A	transcript2033.chr10.nic	protein_coding	69124144,69132898,69157007,69158047,69162406,69166042,69168489,69171156	69124280,69133047,69157163,69158211,69162512,69166110,69168631,69172856	Gene ID= ENSG00000122958.14 TPM= 4.51 Transcript Type= NA
chr10	69124152	69172856	69124152	69172856	+	ENST00000263559.10@VPS26A	ENST00000263559.10	protein_coding	69124152,69132898,69155812,69157007,69158047,69162406,69166042,69168489,69171156	69124280,69133047,69155887,69157163,69158211,69162512,69166110,69168631,69172856	Gene ID= ENSG00000122958.14 TPM= 36.91 Transcript Type= protein_coding
chr10	69124152	69172856	69124152	69172856	+	ENST00000395098.5@VPS26A	ENST00000395098.5	protein_coding	69124152,69132898,69155812,69157007,69158047,69162406,69166042,69171156	69124280,69133047,69155887,69157163,69158211,69162512,69166110,69172856	Gene ID= ENSG00000122958.14 TPM= 2.12 Transcript Type= protein_coding
chr10	69180252	69209098	69180252	69209098	+	transcript2036.chr10.nic@SUPV3L1	transcript2036.chr10.nic	protein_coding	69180252,69182520,69185987,69186443,69187642,69189267,69191655,69195188,69196992,69198372,69199104,69200280,69202439,69202867,69207793,69208600	69180562,69182654,69186064,69186550,69187756,69189435,69191766,69195265,69197083,69198552,69199197,69200499,69202519,69203043,69207941,69209098	Gene ID= ENSG00000156502.13 TPM= 7.44 Transcript Type= NA
chr10	69180232	69209098	69180232	69209098	+	ENST00000359655.8@SUPV3L1	ENST00000359655.8	protein_coding	69180232,69185987,69186443,69187642,69189267,69191655,69195188,69196992,69198372,69199104,69200280,69202439,69202867,69207793,69208600	69180562,69186064,69186550,69187756,69189435,69191766,69195265,69197083,69198552,69199197,69200499,69202519,69203043,69207941,69209098	Gene ID= ENSG00000156502.13 TPM= 37.18 Transcript Type= protein_coding
chr10	69180250	69193263	69180250	69193263	+	ENST00000471069.5@SUPV3L1	ENST00000471069.5	protein_coding	69180250,69185987,69186443,69187642,69189267,69191655	69180562,69186064,69186550,69187756,69189435,69193263	Gene ID= ENSG00000156502.13 TPM= 3.19 Transcript Type= retained_intron
chr10	69193454	69196316	69193454	69196316	-	transcript2045.chr10.nnic@NA	transcript2045.chr10.nnic	NA	69193454	69196316	Gene ID= novel_gene_chr10_2046 TPM= 4.25 Transcript Type= NA
chr10	69315854	69401879	69315854	69401879	+	ENST00000298649.7@HK1	ENST00000298649.7	protein_coding	69315854,69343827,69359897,69364783,69368536,69369237,69369441,69376934,69379862,69382487,69384333,69384796,69386323,69389197,69392125,69394950,69398595,69400991	69316014,69343989,69360045,69364902,69368631,69369336,69369624,69377089,69380095,69382791,69384481,69384915,69386418,69389296,69392308,69395105,69398828,69401879	Gene ID= ENSG00000156515.21 TPM= 58.95 Transcript Type= protein_coding
chr10	69318844	69401882	69318844	69401882	+	ENST00000359426.6@HK1	ENST00000359426.6	protein_coding	69318844,69343827,69359897,69364783,69368536,69369237,69369441,69376934,69379862,69382487,69384333,69384796,69386323,69389197,69392125,69394950,69398595,69400991	69319010,69343989,69360045,69364902,69368631,69369336,69369624,69377089,69380095,69382791,69384481,69384915,69386418,69389296,69392308,69395105,69398828,69401882	Gene ID= ENSG00000156515.21 TPM= 803.52 Transcript Type= protein_coding
chr10	69402000	69402717	69402000	69402717	-	transcript2068.chr10.nnic@NA	transcript2068.chr10.nnic	NA	69402000	69402717	Gene ID= novel_gene_chr10_2069 TPM= 3.19 Transcript Type= NA
chr10	69409117	69410992	69409117	69410992	+	transcript2072.chr10.nnic@NA	transcript2072.chr10.nnic	NA	69409117	69410992	Gene ID= novel_gene_chr10_2073 TPM= 2.12 Transcript Type= NA
chr10	69451466	69507669	69451466	69507669	+	transcript2077.chr10.nnic@TSPAN15	transcript2077.chr10.nnic	protein_coding	69451466,69495594,69498280,69504438,69506124,69506829	69451690,69495689,69498396,69504485,69506240,69507669	Gene ID= ENSG00000099282.9 TPM= 3.19 Transcript Type= NA
chr10	69451473	69507669	69451473	69507669	+	ENST00000373290.6@TSPAN15	ENST00000373290.6	protein_coding	69451473,69483691,69485141,69495594,69498280,69504438,69506124,69506829	69451690,69483876,69485215,69495689,69498396,69504485,69506240,69507669	Gene ID= ENSG00000099282.9 TPM= 3.19 Transcript Type= protein_coding
chr10	69630232	69633599	69630232	69633599	+	transcript2078.chr10.nnic@C10orf35	transcript2078.chr10.nnic	protein_coding	69630232,69631176,69631480,69631709,69632790	69630313,69631275,69631547,69631839,69633599	Gene ID= ENSG00000171224.8 TPM= 2.12 Transcript Type= NA
chr10	69630258	69633599	69630258	69633599	+	ENST00000373279.5@C10orf35	ENST00000373279.5	protein_coding	69630258,69631480,69631709,69632790	69630313,69631547,69631839,69633599	Gene ID= ENSG00000171224.8 TPM= 11.68 Transcript Type= protein_coding
chr10	69870490	69876334	69870490	69876334	-	transcript2092.chr10.nnic@NA	transcript2092.chr10.nnic	NA	69870490	69876334	Gene ID= novel_gene_chr10_2093 TPM= 6.37 Transcript Type= NA
chr10	69919961	69922218	69919961	69922218	+	transcript2090.chr10.nnic@NA	transcript2090.chr10.nnic	NA	69919961	69922218	Gene ID= novel_gene_chr10_2091 TPM= 2.12 Transcript Type= NA
chr10	70052796	70112280	70052796	70112280	+	ENST00000373255.8@H2AFY2	ENST00000373255.8	protein_coding	70052796,70075600,70090060,70091757,70093735,70095654,70100208,70109033,70111518	70053000,70075830,70090166,70091954,70093845,70095753,70100297,70109207,70112280	Gene ID= ENSG00000099284.13 TPM= 27.62 Transcript Type= protein_coding
chr10	70112271	70132934	70112271	70132934	-	ENST00000307864.2@AIFM2	ENST00000307864.2	protein_coding	70132734,70123907,70123405,70121092,70120507,70117812,70116622,70114920,70112271	70132934,70124097,70123520,70121211,70120599,70117920,70116774,70115120,70114329	Gene ID= ENSG00000042286.14 TPM= 15.93 Transcript Type= protein_coding
chr10	70113986	70132609	70113986	70132609	-	transcript2104.chr10.nnic@AIFM2	transcript2104.chr10.nnic	protein_coding	70132172,70123907,70123405,70121092,70120507,70117812,70116622,70114920,70113986	70132609,70124100,70123520,70121211,70120599,70117920,70116774,70115120,70114329	Gene ID= ENSG00000042286.14 TPM= 5.31 Transcript Type= NA
chr10	70113986	70146678	70113986	70146678	-	transcript2105.chr10.nnic@AIFM2	transcript2105.chr10.nnic	protein_coding	70146533,70123907,70123405,70121092,70120507,70117812,70116622,70114920,70113986	70146678,70124100,70123520,70121211,70120599,70117920,70116774,70115120,70114329	Gene ID= ENSG00000042286.14 TPM= 6.37 Transcript Type= NA
chr10	70128866	70132877	70128866	70132877	-	transcript2108.chr10.nnic@AIFM2	transcript2108.chr10.nnic	protein_coding	70132734,70129924,70128866	70132877,70130016,70128962	Gene ID= ENSG00000042286.14 TPM= 2.12 Transcript Type= NA
chr10	70137981	70146656	70137981	70146656	-	ENST00000335494.5@TYSND1	ENST00000335494.5	protein_coding	70145421,70137981	70146656,70140141	Gene ID= ENSG00000156521.13 TPM= 7.44 Transcript Type= protein_coding
chr10	70150204	70170523	70150204	70170523	-	transcript2119.chr10.nnic@SAR1A	transcript2119.chr10.nnic	protein_coding	70170413,70161004,70157764,70153838,70150204	70170523,70161069,70157867,70153969,70152592	Gene ID= ENSG00000079332.14 TPM= 21.24 Transcript Type= NA
chr10	70150204	70170523	70150204	70170523	-	ENST00000373241.8@SAR1A	ENST00000373241.8	protein_coding	70170413,70161858,70161619,70161004,70157764,70153838,70150204	70170523,70161931,70161738,70161069,70157867,70153969,70152592	Gene ID= ENSG00000079332.14 TPM= 74.35 Transcript Type= protein_coding
chr10	70202830	70233427	70202830	70233427	-	ENST00000373232.7@PPA1	ENST00000373232.7	protein_coding	70233264,70230341,70218764,70217812,70214500,70213463,70209558,70209205,70206264,70204873,70202830	70233427,70230399,70218817,70217931,70214586,70213589,70209685,70209290,70206333,70204915,70203186	Gene ID= ENSG00000180817.11 TPM= 92.41 Transcript Type= protein_coding
chr10	70298973	70381914	70298973	70381914	-	ENST00000355790.8@LRRC20	ENST00000355790.8	protein_coding	70381500,70376452,70340553,70323863,70298973	70381914,70376596,70340702,70324030,70301508	Gene ID= ENSG00000172731.13 TPM= 7.97 Transcript Type= protein_coding
chr10	70298970	70382650	70298970	70382650	-	ENST00000395010.5@LRRC20	ENST00000395010.5	protein_coding	70382549,70340553,70323863,70298970	70382650,70340702,70324030,70301508	Gene ID= ENSG00000172731.13 TPM= 13.28 Transcript Type= protein_coding
chr10	70298976	70324480	70298976	70324480	-	transcript2136.chr10.nic@LRRC20	transcript2136.chr10.nic	protein_coding	70323863,70298976	70324480,70301508	Gene ID= ENSG00000172731.13 TPM= 10.8 Transcript Type= NA
chr10	70298976	70382626	70298976	70382626	-	ENST00000357631.6@LRRC20	ENST00000357631.6	protein_coding	70382549,70376452,70340553,70298976	70382626,70376596,70340702,70301508	Gene ID= ENSG00000172731.13 TPM= 15.05 Transcript Type= protein_coding
chr10	70298976	70382626	70298976	70382626	-	ENST00000358141.6@LRRC20	ENST00000358141.6	protein_coding	70382549,70376452,70323863,70298976	70382626,70376596,70324030,70301508	Gene ID= ENSG00000172731.13 TPM= 10.8 Transcript Type= protein_coding
chr10	70298973	70382589	70298973	70382589	-	ENST00000373224.5@LRRC20	ENST00000373224.5	protein_coding	70382494,70376452,70340553,70323863,70298973	70382589,70376596,70340702,70324030,70301508	Gene ID= ENSG00000172731.13 TPM= 9.03 Transcript Type= protein_coding
chr10	70404379	70428618	70404379	70428618	+	ENST00000373218.4@EIF4EBP2	ENST00000373218.4	protein_coding	70404379,70419914,70421716	70404546,70420099,70428618	Gene ID= ENSG00000148730.6 TPM= 46.74 Transcript Type= protein_coding
chr10	70411387	70411491	70411387	70411491	-	transcript2150.chr10.nnic@NA	transcript2150.chr10.nnic	NA	70411387	70411491	Gene ID= novel_gene_chr10_2151 TPM= 2.12 Transcript Type= NA
chr10	70478821	70568449	70478821	70568449	+	ENST00000263563.6@PALD1	ENST00000263563.6	protein_coding	70478821,70525923,70529229,70529889,70531290,70532621,70532995,70533922,70534425,70534739,70537811,70538280,70538892,70539092,70539580,70541102,70541463,70547306,70564364,70566581	70479059,70526136,70529331,70530068,70531454,70532781,70533070,70534073,70534524,70534843,70537906,70538408,70539008,70539247,70539762,70541242,70541534,70547446,70564519,70568449	Gene ID= ENSG00000107719.8 TPM= 9.56 Transcript Type= protein_coding
chr10	70597348	70602759	70597348	70602759	-	ENST00000373209.2@PRF1	ENST00000373209.2	protein_coding	70602645,70600364,70597348	70602759,70600906,70599181	Gene ID= ENSG00000180644.7 TPM= 3.19 Transcript Type= protein_coding
chr10	70759120	70760729	70759120	70760729	-	transcript2161.chr10.nnic@NA	transcript2161.chr10.nnic	NA	70759120	70760729	Gene ID= novel_gene_chr10_2162 TPM= 2.12 Transcript Type= NA
chr10	70878197	70880108	70878197	70880108	+	transcript2165.chr10.nnic@NA	transcript2165.chr10.nnic	NA	70878197	70880108	Gene ID= novel_gene_chr10_2166 TPM= 8.5 Transcript Type= NA
chr10	70882280	70888628	70882280	70888628	-	transcript2167.chr10.nic@PCBD1	transcript2167.chr10.nic	protein_coding	70888531,70885798,70885152,70882280	70888628,70885929,70885232,70882485	Gene ID= ENSG00000166228.8 TPM= 8.5 Transcript Type= NA
chr10	70883510	70888784	70883510	70888784	-	ENST00000299299.3@PCBD1	ENST00000299299.3	protein_coding	70888531,70885798,70885152,70883510	70888784,70885929,70885232,70884048	Gene ID= ENSG00000166228.8 TPM= 154.01 Transcript Type= protein_coding
chr10	71000922	71003562	71000922	71003562	-	transcript2181.chr10.nnic@NA	transcript2181.chr10.nnic	NA	71000922	71003562	Gene ID= novel_gene_chr10_2182 TPM= 2.12 Transcript Type= NA
chr10	71003108	71005783	71003108	71005783	-	transcript2172.chr10.nnic@NA	transcript2172.chr10.nnic	NA	71005683,71004476,71003108	71005783,71004584,71003770	Gene ID= novel_gene_chr10_2173 TPM= 3.19 Transcript Type= NA
chr10	71003108	71005761	71003108	71005761	-	transcript2177.chr10.nnic@NA	transcript2177.chr10.nnic	NA	71005683,71003108	71005761,71004365	Gene ID= novel_gene_chr10_2173 TPM= 4.78 Transcript Type= NA
chr10	71003108	71005783	71003108	71005783	-	transcript2179.chr10.nnic@NA	transcript2179.chr10.nnic	NA	71005683,71003108	71005783,71004584	Gene ID= novel_gene_chr10_2173 TPM= 4.78 Transcript Type= NA
chr10	71217224	71218228	71217224	71218228	-	ENST00000447119.2@UNC5B-AS1	ENST00000447119.2	antisense_RNA	71217994,71217224	71218228,71217635	Gene ID= ENSG00000237512.6 TPM= 3.72 Transcript Type= antisense_RNA
chr10	71217224	71217825	71217224	71217825	-	ENST00000449737.5@UNC5B-AS1	ENST00000449737.5	antisense_RNA	71217766,71217224	71217825,71217635	Gene ID= ENSG00000237512.6 TPM= 3.72 Transcript Type= antisense_RNA
chr10	71256686	71259399	71256686	71259399	+	transcript2192.chr10.nnic@NA	transcript2192.chr10.nnic	NA	71256686	71259399	Gene ID= novel_gene_chr10_2193 TPM= 3.19 Transcript Type= NA
chr10	71298050	71299931	71298050	71299931	+	transcript2194.chr10.nnic@NA	transcript2194.chr10.nnic	NA	71298050	71299931	Gene ID= novel_gene_chr10_2195 TPM= 6.37 Transcript Type= NA
chr10	71760482	71773603	71760482	71773603	-	transcript2204.chr10.nic@VSIR	transcript2204.chr10.nic	protein_coding	71773358,71761598,71760482	71773603,71762026,71760924	Gene ID= ENSG00000107738.19 TPM= 6.37 Transcript Type= NA
chr10	71747559	71773498	71747559	71773498	-	ENST00000394957.7@VSIR	ENST00000394957.7	protein_coding	71773358,71761598,71760868,71755359,71752975,71751668,71747559	71773498,71762026,71760924,71755466,71753002,71751861,71751290	Gene ID= ENSG00000107738.19 TPM= 25.49 Transcript Type= protein_coding
chr10	71769256	71773573	71769256	71773573	-	transcript2205.chr10.nnic@NA	transcript2205.chr10.nnic	NA	71769256	71773573	Gene ID= novel_gene_chr10_2206 TPM= 4.25 Transcript Type= NA
chr10	71816298	71851375	71816298	71851375	-	ENST00000394936.7@PSAP	ENST00000394936.7	protein_coding	71851182,71834372,71831846,71831126,71828877,71828014,71825837,71821876,71820240,71819714,71819465,71819031,71818617,71816298	71851375,71834505,71831920,71831251,71829077,71828157,71825893,71822007,71820335,71819900,71819622,71819111,71818724,71817476	Gene ID= ENSG00000197746.13 TPM= 1739.68 Transcript Type= protein_coding
chr10	71967977	71972698	71967977	71972698	-	transcript2246.chr10.nnic@NA	transcript2246.chr10.nnic	NA	71967977	71972698	Gene ID= novel_gene_chr10_2247 TPM= 9.56 Transcript Type= NA
chr10	72059035	72088773	72059035	72088773	-	ENST00000373109.6@SPOCK2	ENST00000373109.6	protein_coding	72088140,72072902,72072503,72072144,72070312,72068187,72067613,72066902,72064178,72063025,72059035	72088773,72072910,72072548,72072258,72070426,72068301,72067732,72067120,72064240,72063162,72062905	Gene ID= ENSG00000107742.12 TPM= 7.44 Transcript Type= protein_coding
chr10	72062406	72088526	72062406	72088526	-	ENST00000536168.2@SPOCK2	ENST00000536168.2	protein_coding	72088136,72072503,72072144,72070312,72068187,72067613,72066902,72064178,72063025,72062406	72088526,72072550,72072258,72070426,72068301,72067732,72067120,72064240,72063162,72062905	Gene ID= ENSG00000107742.12 TPM= 1.06 Transcript Type= protein_coding
chr10	72096522	72215991	72096522	72215991	-	transcript2256.chr10.nic@ASCC1	transcript2256.chr10.nic	protein_coding	72215782,72213187,72210732,72203427,72196811,72161538,72152869,72133057,72128082,72096522	72215991,72213331,72210831,72203524,72196989,72161674,72152988,72133181,72128167,72097450	Gene ID= ENSG00000138303.17 TPM= 14.34 Transcript Type= NA
chr10	72096521	72216288	72096521	72216288	-	ENST00000317168.10@ASCC1	ENST00000317168.10	protein_coding	72216207,72213187,72210732,72203427,72196811,72161538,72152869,72133057,72128082,72096521	72216288,72213331,72210831,72203524,72196989,72161674,72152988,72133181,72128167,72097450	Gene ID= ENSG00000138303.17 TPM= 19.65 Transcript Type= protein_coding
chr10	72215996	72233829	72215996	72233829	+	transcript2265.chr10.nnic@ANAPC16	transcript2265.chr10.nnic	protein_coding	72215996,72220054,72223888,72230366,72233001	72216072,72220379,72224056,72230440,72233829	Gene ID= ENSG00000166295.8 TPM= 21.24 Transcript Type= NA
chr10	72216000	72235858	72216000	72235858	+	ENST00000621663.4@ANAPC16	ENST00000621663.4	protein_coding	72216000,72220054,72223888,72230366,72233001	72216138,72220379,72224056,72230440,72235858	Gene ID= ENSG00000166295.8 TPM= 18.06 Transcript Type= protein_coding
chr10	72216017	72235860	72216017	72235860	+	transcript2272.chr10.nnic@ANAPC16	transcript2272.chr10.nnic	protein_coding	72216017,72223888,72230366,72233001,72235339	72216138,72224056,72230440,72234125,72235860	Gene ID= ENSG00000166295.8 TPM= 9.56 Transcript Type= NA
chr10	72215982	72233829	72215982	72233829	+	transcript2275.chr10.nic@ANAPC16	transcript2275.chr10.nic	protein_coding	72215982,72223888,72230366,72233001	72216072,72224056,72230440,72233829	Gene ID= ENSG00000166295.8 TPM= 52.05 Transcript Type= NA
chr10	72215999	72233829	72215999	72233829	+	transcript2287.chr10.nnic@ANAPC16	transcript2287.chr10.nnic	protein_coding	72215999,72230366,72233001	72216138,72230440,72233829	Gene ID= ENSG00000166295.8 TPM= 12.75 Transcript Type= NA
chr10	72216017	72224154	72216017	72224154	+	transcript2291.chr10.nic@ANAPC16	transcript2291.chr10.nic	protein_coding	72216017,72220054,72223888	72216138,72220379,72224154	Gene ID= ENSG00000166295.8 TPM= 12.75 Transcript Type= NA
chr10	72223133	72233829	72223133	72233829	+	ENST00000470481.2@ANAPC16	ENST00000470481.2	protein_coding	72223133,72230366,72233001	72224056,72230440,72233829	Gene ID= ENSG00000166295.8 TPM= 7.44 Transcript Type= processed_transcript
chr10	72216030	72217323	72216030	72217323	+	transcript2296.chr10.nnic@NA	transcript2296.chr10.nnic	NA	72216030	72217323	Gene ID= novel_gene_chr10_2297 TPM= 2.12 Transcript Type= NA
chr10	72273920	72276036	72273920	72276036	+	ENST00000307365.3@DDIT4	ENST00000307365.3	protein_coding	72273920,72274157,72274695	72274060,72274421,72276036	Gene ID= ENSG00000168209.4 TPM= 45.67 Transcript Type= protein_coding
chr10	72332835	72355001	72332835	72355001	-	transcript2301.chr10.nic@DNAJB12	transcript2301.chr10.nic	protein_coding	72354765,72344950,72343366,72340985,72340789,72338202,72336524,72335834,72332835	72355001,72345127,72343511,72341170,72340868,72338311,72336696,72335931,72334617	Gene ID= ENSG00000148719.14 TPM= 12.21 Transcript Type= NA
chr10	72332830	72355149	72332830	72355149	-	ENST00000338820.7@DNAJB12	ENST00000338820.7	protein_coding	72354765,72344950,72343366,72340985,72340789,72338202,72336524,72332830	72355149,72345127,72343511,72341170,72340868,72338311,72336696,72335931	Gene ID= ENSG00000148719.14 TPM= 2.12 Transcript Type= protein_coding
chr10	72367327	72626191	72367327	72626191	-	ENST00000398761.8@MICU1	ENST00000398761.8	protein_coding	72626010,72566633,72562895,72551179,72533742,72508155,72477174,72475100,72423234,72407929,72375783,72367327	72626191,72566794,72563063,72551341,72533789,72508271,72477256,72475297,72423371,72408037,72375872,72368355	Gene ID= ENSG00000107745.18 TPM= 5.84 Transcript Type= protein_coding
chr10	72367340	72626105	72367340	72626105	-	ENST00000361114.9@MICU1	ENST00000361114.9	protein_coding	72626010,72566633,72562895,72551179,72533746,72508155,72477174,72475100,72423234,72407929,72375783,72367340	72626105,72566794,72563063,72551341,72533789,72508269,72477256,72475297,72423371,72408037,72375872,72368355	Gene ID= ENSG00000107745.18 TPM= 51.51 Transcript Type= protein_coding
chr10	72692131	72887694	72692131	72887694	+	ENST00000373053.7@MCU	ENST00000373053.7	protein_coding	72692131,72834359,72859177,72860423,72868703,72871377,72884266,72885745	72692301,72834428,72859347,72860527,72868863,72871580,72884382,72887694	Gene ID= ENSG00000156026.14 TPM= 19.12 Transcript Type= protein_coding
chr10	73007217	73096866	73007217	73096866	-	transcript2330.chr10.nnic@P4HA1	transcript2330.chr10.nnic	protein_coding	73096766,73077721,73074808,73073731,73072029,73068846,73053351,73051053,73046925,73044981,73030267,73016846,73014224,73010969,73009807,73007217	73096866,73077813,73074915,73073827,73072180,73068983,73053590,73051249,73047101,73045051,73030370,73016895,73014289,73011037,73009903,73008292	Gene ID= ENSG00000122884.12 TPM= 2.97 Transcript Type= NA
chr10	73007224	73096974	73007224	73096974	-	ENST00000263556.3@P4HA1	ENST00000263556.3	protein_coding	73096766,73074808,73073731,73072029,73068846,73053351,73051053,73046925,73043887,73030271,73016846,73014224,73010969,73009807,73007224	73096974,73074915,73073827,73072180,73068983,73053590,73051249,73047101,73043957,73030370,73016899,73014289,73011037,73009903,73008292	Gene ID= ENSG00000122884.12 TPM= 1.91 Transcript Type= protein_coding
chr10	73007224	73096974	73007224	73096974	-	ENST00000394890.6@P4HA1	ENST00000394890.6	protein_coding	73096766,73074808,73073731,73072029,73068846,73053351,73051053,73046925,73044981,73030271,73016846,73014224,73010969,73009807,73007224	73096974,73074915,73073827,73072180,73068983,73053590,73051249,73047101,73045051,73030370,73016899,73014289,73011037,73009903,73008292	Gene ID= ENSG00000122884.12 TPM= 5.1 Transcript Type= protein_coding
chr10	73007217	73096850	73007217	73096850	-	ENST00000373008.6@P4HA1	ENST00000373008.6	protein_coding	73096766,73074808,73073731,73072029,73068846,73053351,73051053,73046925,73043887,73030267,73016846,73014224,73010969,73009807,73007217	73096850,73074915,73073827,73072180,73068983,73053590,73051249,73047101,73043957,73030370,73016895,73014289,73011037,73009903,73008292	Gene ID= ENSG00000122884.12 TPM= 5.1 Transcript Type= protein_coding
chr10	73007217	73096850	73007217	73096850	-	ENST00000307116.6@P4HA1	ENST00000307116.6	protein_coding	73096766,73074808,73073731,73072029,73068846,73053351,73051053,73046925,73044981,73030267,73016846,73014224,73010969,73009807,73007217	73096850,73074915,73073827,73072180,73068983,73053590,73051249,73047101,73045051,73030370,73016895,73014289,73011037,73009903,73008292	Gene ID= ENSG00000122884.12 TPM= 12.53 Transcript Type= protein_coding
chr10	73110459	73131828	73110459	73131828	+	ENST00000357321.8@NUDT13	ENST00000357321.8	protein_coding	73110459,73114357,73120018,73122175,73124214,73125118,73125398,73126673,73130703	73110567,73114448,73120157,73122309,73124320,73125243,73125509,73126827,73131828	Gene ID= ENSG00000166321.13 TPM= 1.06 Transcript Type= protein_coding
chr10	73133656	73168059	73133656	73168059	-	ENST00000372979.8@ECD	ENST00000372979.8	protein_coding	73167866,73163733,73160434,73156568,73156275,73154256,73152293,73148276,73146276,73139631,73139309,73138003,73136704,73133656	73168059,73163950,73160551,73156655,73156453,73154448,73152421,73148404,73146361,73139737,73139495,73138070,73136918,73134813	Gene ID= ENSG00000122882.10 TPM= 5.31 Transcript Type= protein_coding
chr10	73242824	73248862	73242824	73248862	-	ENST00000372950.4@DNAJC9	ENST00000372950.4	protein_coding	73247010,73246688,73245922,73243843,73242824	73248862,73246828,73246176,73243929,73243519	Gene ID= ENSG00000213551.4 TPM= 13.81 Transcript Type= protein_coding
chr10	73248843	73252693	73248843	73252693	-	ENST00000372945.7@MRPS16	ENST00000372945.7	protein_coding	73252470,73251763,73248843	73252693,73252023,73250991	Gene ID= ENSG00000182180.13 TPM= 128.52 Transcript Type= protein_coding
chr10	73248843	73252625	73248843	73252625	-	ENST00000479005.1@MRPS16	ENST00000479005.1	protein_coding	73252470,73251763,73248843	73252625,73252037,73250991	Gene ID= ENSG00000182180.13 TPM= 15.93 Transcript Type= processed_transcript
chr10	73252747	73254347	73252747	73254347	+	transcript2375.chr10.nnic@NA	transcript2375.chr10.nnic	NA	73252747	73254347	Gene ID= novel_gene_chr10_2376 TPM= 3.19 Transcript Type= NA
chr10	73375445	73414067	73375445	73414067	-	ENST00000372919.8@ANXA7	ENST00000372919.8	protein_coding	73414012,73400803,73398181,73397164,73396519,73396044,73388312,73387689,73383577,73383175,73380031,73379879,73378911,73375445	73414067,73400857,73398385,73397274,73396583,73396109,73388414,73387783,73383690,73383345,73380201,73379954,73379023,73376217	Gene ID= ENSG00000138279.15 TPM= 149.76 Transcript Type= protein_coding
chr10	73423581	73433561	73423581	73433561	-	ENST00000299432.6@MSS51	ENST00000299432.6	protein_coding	73433513,73428064,73427613,73426607,73425811,73425098,73423581	73433561,73428301,73427768,73426731,73426377,73425191,73424772	Gene ID= ENSG00000166343.9 TPM= 3.19 Transcript Type= protein_coding
chr10	73436806	73496024	73436806	73496024	-	ENST00000394829.6@PPP3CB	ENST00000394829.6	protein_coding	73495805,73479317,73478499,73474919,73471468,73471070,73470887,73470687,73467553,73454412,73446492,73444725,73439872,73436806	73496024,73479517,73478623,73475030,73471613,73471209,73470964,73470781,73467678,73454489,73446576,73444822,73439901,73438420	Gene ID= ENSG00000107758.15 TPM= 29.21 Transcript Type= protein_coding
chr10	73436806	73496024	73436806	73496024	-	ENST00000394828.6@PPP3CB	ENST00000394828.6	protein_coding	73495805,73479317,73478499,73474919,73471468,73471070,73470887,73470687,73467553,73454412,73446492,73444725,73436806	73496024,73479517,73478623,73475030,73471613,73471209,73470964,73470781,73467678,73454489,73446576,73444822,73438420	Gene ID= ENSG00000107758.15 TPM= 15.4 Transcript Type= protein_coding
chr10	73497538	73519162	73497538	73519162	-	transcript2411.chr10.nic@USP54	transcript2411.chr10.nic	protein_coding	73516375,73505308,73500655,73497538	73519162,73505426,73500838,73499188	Gene ID= ENSG00000166348.18 TPM= 13.81 Transcript Type= NA
chr10	73631654	73641757	73631654	73641757	-	ENST00000359322.4@MYOZ1	ENST00000359322.4	protein_coding	73641411,73639945,73637744,73634484,73633900,73631654	73641757,73640035,73637922,73634733,73634065,73632161	Gene ID= ENSG00000177791.11 TPM= 5.31 Transcript Type= protein_coding
chr10	73645520	73650030	73645520	73650030	-	transcript2428.chr10.nnic@SYNPO2L	transcript2428.chr10.nnic	protein_coding	73649811,73645520	73650030,73648879	Gene ID= ENSG00000166317.11 TPM= 65.94 Transcript Type= NA
chr10	73644881	73656072	73644881	73656072	-	ENST00000394810.2@SYNPO2L	ENST00000394810.2	protein_coding	73655818,73654129,73653139,73644881	73656072,73654280,73653653,73648879	Gene ID= ENSG00000166317.11 TPM= 572.59 Transcript Type= protein_coding
chr10	73644881	73651029	73644881	73651029	-	ENST00000372873.8@SYNPO2L	ENST00000372873.8	protein_coding	73650908,73644881	73651029,73648879	Gene ID= ENSG00000166317.11 TPM= 515.23 Transcript Type= protein_coding
chr10	73648144	73652088	73648144	73652088	+	transcript2430.chr10.nnic@NA	transcript2430.chr10.nnic	NA	73648144	73652088	Gene ID= novel_gene_chr10_2431 TPM= 14.6 Transcript Type= NA
chr10	73653862	73676308	73653862	73676308	+	transcript2456.chr10.nnic@AC073389.2	transcript2456.chr10.nnic	antisense_RNA	73653862,73674573	73654306,73676308	Gene ID= ENSG00000271848.1 TPM= 3.19 Transcript Type= NA
chr10	73715843	73730469	73715843	73730469	-	ENST00000584747.5@BMS1P4	ENST00000584747.5	transcribed_unprocessed_pseudogene	73730316,73728379,73727293,73725961,73722389,73721362,73720538,73719160,73718015,73715843	73730469,73728587,73727482,73726040,73722577,73721504,73720659,73719299,73718165,73716180	Gene ID= ENSG00000242338.6 TPM= 1.06 Transcript Type= processed_transcript
chr10	73731680	73733996	73731680	73733996	+	transcript2458.chr10.nnic@NA	transcript2458.chr10.nnic	NA	73731680	73733996	Gene ID= novel_gene_chr10_2459 TPM= 5.31 Transcript Type= NA
chr10	73742995	73744230	73742995	73744230	-	ENST00000625041.1@AC022400.7	ENST00000625041.1	TEC	73742995	73744230	Gene ID= ENSG00000279088.1 TPM= 4.25 Transcript Type= TEC
chr10	73744384	73772161	73744384	73772161	+	ENST00000345254.8@SEC24C	ENST00000345254.8	protein_coding	73744384,73746805,73751108,73759622,73760018,73760713,73763490,73763856,73765451,73765800,73766086,73766350,73766760,73767054,73767837,73768810,73769007,73769347,73769615,73769836,73770280,73770709,73770955	73744437,73747004,73751243,73759794,73760386,73760849,73763601,73763983,73765589,73765915,73766210,73766541,73766853,73767170,73768007,73768906,73769152,73769485,73769733,73770015,73770471,73770798,73772161	Gene ID= ENSG00000176986.15 TPM= 120.02 Transcript Type= protein_coding
chr10	73772300	73777325	73772300	73777325	+	transcript2449.chr10.nnic@FUT11	transcript2449.chr10.nnic	protein_coding	73772300,73773190,73775541,73776942	73773041,73773815,73776342,73777325	Gene ID= ENSG00000196968.10 TPM= 4.25 Transcript Type= NA
chr10	73772291	73776219	73772291	73776219	+	ENST00000372841.7@FUT11	ENST00000372841.7	protein_coding	73772291,73773190,73775541	73773041,73773815,73776219	Gene ID= ENSG00000196968.10 TPM= 5.31 Transcript Type= protein_coding
chr10	73772300	73779274	73772300	73779274	+	transcript2455.chr10.nic@FUT11	transcript2455.chr10.nic	protein_coding	73772300,73773190,73778828	73773041,73773815,73779274	Gene ID= ENSG00000196968.10 TPM= 2.66 Transcript Type= NA
chr10	73778256	73779577	73778256	73779577	+	transcript2462.chr10.nnic@NA	transcript2462.chr10.nnic	NA	73778256	73779577	Gene ID= novel_gene_chr10_2463 TPM= 3.19 Transcript Type= NA
chr10	73782063	73783652	73782063	73783652	+	ENST00000372833.5@CHCHD1	ENST00000372833.5	protein_coding	73782063,73782323,73783074	73782199,73782441,73783652	Gene ID= ENSG00000172586.7 TPM= 5.31 Transcript Type= protein_coding
chr10	73810684	73811798	73810684	73811798	-	ENST00000398701.2@NDST2	ENST00000398701.2	protein_coding	73811474,73810684	73811798,73810903	Gene ID= ENSG00000166507.17 TPM= 1.06 Transcript Type= processed_transcript
chr10	73812501	73874591	73812501	73874591	-	ENST00000322680.7@CAMK2G	ENST00000322680.7	protein_coding	73874397,73872989,73860830,73853192,73852254,73849261,73849013,73848526,73847988,73847225,73842458,73842169,73837468,73825279,73824040,73821682,73819532,73817479,73817023,73815003,73812501	73874591,73873083,73860889,73853246,73852319,73849333,73849115,73848609,73848082,73847347,73842541,73842211,73837511,73825347,73824084,73821730,73819645,73817554,73817117,73815247,73814505	Gene ID= ENSG00000148660.20 TPM= 3.9 Transcript Type= protein_coding
chr10	73812501	73874591	73812501	73874591	-	ENST00000394762.6@CAMK2G	ENST00000394762.6	protein_coding	73874397,73872989,73860830,73853192,73852254,73849261,73849013,73848526,73847988,73847225,73842458,73842169,73839539,73837468,73825279,73824040,73821682,73817479,73817023,73815003,73812501	73874591,73873083,73860889,73853246,73852319,73849333,73849115,73848609,73848082,73847347,73842541,73842211,73839601,73837511,73825347,73824084,73821730,73817554,73817117,73815247,73814505	Gene ID= ENSG00000148660.20 TPM= 1.77 Transcript Type= protein_coding
chr10	73812501	73874571	73812501	73874571	-	transcript2477.chr10.nic@CAMK2G	transcript2477.chr10.nic	protein_coding	73874397,73872989,73860830,73853192,73852254,73849261,73849013,73848526,73847988,73847225,73842458,73842169,73837468,73825279,73824040,73821682,73817479,73817023,73815003,73812501	73874571,73873083,73860889,73853246,73852319,73849333,73849115,73848609,73848082,73847347,73842541,73842211,73837511,73825347,73824084,73821730,73817554,73817117,73815247,73814505	Gene ID= ENSG00000148660.20 TPM= 2.84 Transcript Type= NA
chr10	73814288	73874571	73814288	73874571	-	transcript2478.chr10.nic@CAMK2G	transcript2478.chr10.nic	protein_coding	73874397,73872989,73860830,73853192,73852254,73849261,73849013,73848526,73847988,73847225,73842458,73842169,73837468,73824040,73821682,73819532,73817479,73817023,73815003,73814288	73874571,73873083,73860889,73853246,73852319,73849333,73849115,73848609,73848082,73847347,73842541,73842211,73837511,73824084,73821730,73819645,73817554,73817117,73815247,73814505	Gene ID= ENSG00000148660.20 TPM= 2.12 Transcript Type= NA
chr10	73814288	73874502	73814288	73874502	-	ENST00000372765.5@CAMK2G	ENST00000372765.5	protein_coding	73874397,73872989,73860830,73853192,73852254,73849261,73849013,73848526,73847988,73847225,73842458,73842169,73839539,73837468,73824040,73821682,73817479,73817023,73815003,73814288	73874502,73873083,73860889,73853246,73852319,73849333,73849115,73848609,73848082,73847347,73842541,73842211,73839601,73837511,73824084,73821730,73817554,73817117,73815247,73814505	Gene ID= ENSG00000148660.20 TPM= 2.12 Transcript Type= protein_coding
chr10	73911157	73917497	73911157	73917497	+	ENST00000372764.3@PLAU	ENST00000372764.3	protein_coding	73911157,73911525,73912041,73912215,73912924,73913290,73913539,73913980,73914776,73915251,73916389	73911218,73911612,73912068,73912322,73913098,73913381,73913758,73914128,73914916,73915399,73917497	Gene ID= ENSG00000122861.15 TPM= 22.31 Transcript Type= protein_coding
chr10	73998114	74121363	73998114	74121363	+	ENST00000372755.7@VCL	ENST00000372755.7	protein_coding	73998114,74043083,74070670,74070975,74072730,74074743,74082454,74083366,74089196,74090023,74094271,74095656,74097204,74100948,74103820,74105051,74107230,74108971,74114184,74114795,74118023	73998375,74043153,74070820,74071083,74072852,74074903,74082544,74083513,74089349,74090198,74094461,74095855,74097332,74101097,74103928,74105353,74107354,74109156,74114387,74114899,74121363	Gene ID= ENSG00000035403.17 TPM= 23.37 Transcript Type= protein_coding
chr10	73998114	74120160	73998114	74120160	+	ENST00000211998.9@VCL	ENST00000211998.9	protein_coding	73998114,74043083,74070670,74070975,74072730,74074743,74082454,74083366,74089196,74090023,74094271,74095656,74097204,74100948,74103820,74105051,74107230,74108971,74111909,74114184,74114795,74118023	73998375,74043153,74070820,74071083,74072852,74074903,74082544,74083513,74089349,74090198,74094461,74095855,74097332,74101097,74103928,74105353,74107354,74109156,74112112,74114387,74114899,74120160	Gene ID= ENSG00000035403.17 TPM= 13.81 Transcript Type= protein_coding
chr10	74122964	74150842	74122964	74150842	-	ENST00000372745.1@AP3M1	ENST00000372745.1	protein_coding	74150755,74138806,74138107,74136632,74134027,74129907,74129108,74126148,74124380,74122964	74150842,74138931,74138382,74136803,74134164,74129992,74129241,74126355,74124524,74123910	Gene ID= ENSG00000185009.12 TPM= 7.44 Transcript Type= protein_coding
chr10	74120255	74151063	74120255	74151063	-	ENST00000355264.8@AP3M1	ENST00000355264.8	protein_coding	74150755,74138107,74136632,74134027,74129907,74129108,74126148,74124380,74120255	74151063,74138382,74136803,74134164,74129992,74129241,74126355,74124524,74123910	Gene ID= ENSG00000185009.12 TPM= 7.44 Transcript Type= protein_coding
chr10	74151212	74708701	74151212	74708701	+	transcript2520.chr10.nic@ADK	transcript2520.chr10.nic	protein_coding	74151212,74174416,74200764,74224538,74314667,74394141,74398471,74525256,74589282,74600379,74670183,74708321	74151343,74174618,74200838,74224591,74314745,74394313,74398579,74525426,74589317,74600493,74670269,74708701	Gene ID= ENSG00000156110.13 TPM= 2.12 Transcript Type= NA
chr10	74176686	74709303	74176686	74709303	+	ENST00000372734.3@ADK	ENST00000372734.3	protein_coding	74176686,74200764,74224538,74314667,74394141,74398471,74525256,74589282,74600379,74670183,74708321	74176886,74200838,74224591,74314745,74394313,74398579,74525426,74589317,74600493,74670269,74709303	Gene ID= ENSG00000156110.13 TPM= 2.12 Transcript Type= protein_coding
chr10	74151185	74709299	74151185	74709299	+	ENST00000539909.5@ADK	ENST00000539909.5	protein_coding	74151185,74200764,74224538,74314667,74394141,74398471,74589282,74600379,74670183,74708321	74151343,74200838,74224591,74314745,74394313,74398579,74589317,74600493,74670269,74709299	Gene ID= ENSG00000156110.13 TPM= 1.06 Transcript Type= protein_coding
chr10	74151229	74708475	74151229	74708475	+	ENST00000286621.6@ADK	ENST00000286621.6	protein_coding	74151229,74200764,74224538,74314667,74394141,74398471,74525256,74589282,74600379,74670183,74708321	74151343,74200838,74224591,74314745,74394313,74398579,74525426,74589317,74600493,74670269,74708475	Gene ID= ENSG00000156110.13 TPM= 1.06 Transcript Type= protein_coding
chr10	74151203	74152644	74151203	74152644	+	transcript2541.chr10.nnic@NA	transcript2541.chr10.nnic	NA	74151203	74152644	Gene ID= novel_gene_chr10_2542 TPM= 2.12 Transcript Type= NA
chr10	74826570	75022137	74826570	75022137	+	transcript2547.chr10.nic@KAT6B	transcript2547.chr10.nic	protein_coding	74826570,74838683,74842600,74959970,74969660,74970020,74972507,74975399,74977316,74979224,74981787,74985080,74989019,75020582,75021126,75021881	74826785,74838752,74843478,74960078,74969775,74970101,74972639,74975454,74977437,74979339,74981928,74985241,74989112,75020813,75021285,75022137	Gene ID= ENSG00000156650.12 TPM= 3.19 Transcript Type= NA
chr10	75094436	75109142	75094436	75109142	-	transcript2558.chr10.nnic@DUSP13	transcript2558.chr10.nnic	protein_coding	75109009,75107992,75101867,75097712,75095575,75094436	75109142,75108283,75101961,75097885,75095795,75094878	Gene ID= ENSG00000079393.20 TPM= 5.66 Transcript Type= NA
chr10	75094436	75101919	75094436	75101919	-	transcript2562.chr10.nnic@DUSP13	transcript2562.chr10.nnic	protein_coding	75101867,75095575,75094436	75101919,75095795,75094878	Gene ID= ENSG00000079393.20 TPM= 21.59 Transcript Type= NA
chr10	75094434	75109221	75094434	75109221	-	ENST00000372702.7@DUSP13	ENST00000372702.7	protein_coding	75109009,75107992,75105661,75103894,75101867,75097712,75095575,75094434	75109221,75108209,75105868,75104097,75101961,75097885,75095795,75094878	Gene ID= ENSG00000079393.20 TPM= 13.1 Transcript Type= protein_coding
chr10	75111471	75176831	75111471	75176831	+	ENST00000372690.7@SAMD8	ENST00000372690.7	protein_coding	75111471,75150514,75164645,75168541,75176066,75176388	75111722,75151106,75164740,75168658,75176216,75176831	Gene ID= ENSG00000156671.12 TPM= 2.12 Transcript Type= protein_coding
chr10	75111635	75182123	75111635	75182123	+	ENST00000542569.5@SAMD8	ENST00000542569.5	protein_coding	75111635,75150514,75164645,75168541,75176066,75176388	75111722,75151106,75164740,75168658,75176216,75182123	Gene ID= ENSG00000156671.12 TPM= 11.68 Transcript Type= protein_coding
chr10	75210848	75231277	75210848	75231277	+	ENST00000313132.8@VDAC2	ENST00000313132.8	protein_coding	75210848,75211134,75211482,75212230,75214021,75219063,75219304,75220743,75222252,75229644,75230898	75210938,75211189,75211659,75212298,75214070,75219215,75219356,75220970,75222402,75229701,75231277	Gene ID= ENSG00000165637.13 TPM= 1.06 Transcript Type= protein_coding
chr10	75210751	75231448	75210751	75231448	+	ENST00000332211.10@VDAC2	ENST00000332211.10	protein_coding	75210751,75211134,75212230,75214021,75219063,75219304,75220743,75222252,75229644,75230898	75210938,75211189,75212298,75214070,75219215,75219356,75220970,75222402,75229701,75231448	Gene ID= ENSG00000165637.13 TPM= 262.53 Transcript Type= protein_coding
chr10	75233971	75235957	75233971	75235957	-	transcript2598.chr10.nic@COMTD1	transcript2598.chr10.nic	protein_coding	75235616,75235267,75235060,75234938,75234610,75233971	75235957,75235372,75235178,75234992,75234743,75234225	Gene ID= ENSG00000165644.10 TPM= 13.46 Transcript Type= NA
chr10	75233971	75236038	75233971	75236038	-	transcript2599.chr10.nnic@COMTD1	transcript2599.chr10.nnic	protein_coding	75235835,75235267,75235060,75234938,75234610,75233971	75236038,75235372,75235178,75234992,75234743,75234225	Gene ID= ENSG00000165644.10 TPM= 7.08 Transcript Type= NA
chr10	75233971	75235957	75233971	75235957	-	transcript2603.chr10.nic@COMTD1	transcript2603.chr10.nic	protein_coding	75235616,75235267,75234938,75234610,75233971	75235957,75235372,75235178,75234743,75234225	Gene ID= ENSG00000165644.10 TPM= 2.47 Transcript Type= NA
chr10	75233971	75235959	75233971	75235959	-	transcript2607.chr10.nnic@COMTD1	transcript2607.chr10.nnic	protein_coding	75235835,75234938,75234610,75233971	75235959,75235178,75234743,75234225	Gene ID= ENSG00000165644.10 TPM= 2.47 Transcript Type= NA
chr10	75233971	75235957	75233971	75235957	-	transcript2608.chr10.nic@COMTD1	transcript2608.chr10.nic	protein_coding	75235616,75235267,75234610,75233971	75235957,75235372,75235178,75234225	Gene ID= ENSG00000165644.10 TPM= 3.37 Transcript Type= NA
chr10	75233969	75236011	75233969	75236011	-	ENST00000372538.7@COMTD1	ENST00000372538.7	protein_coding	75235835,75235616,75235267,75235060,75234938,75234610,75233969	75236011,75235743,75235372,75235178,75234992,75234743,75234225	Gene ID= ENSG00000165644.10 TPM= 32.22 Transcript Type= protein_coding
chr10	75233984	75235512	75233984	75235512	-	ENST00000470947.5@COMTD1	ENST00000470947.5	protein_coding	75235267,75235060,75234938,75234610,75233984	75235512,75235178,75234992,75234743,75234225	Gene ID= ENSG00000165644.10 TPM= 3.72 Transcript Type= processed_transcript
chr10	75233971	75235783	75233971	75235783	-	transcript2609.chr10.nnic@NA	transcript2609.chr10.nnic	NA	75233971	75235783	Gene ID= novel_gene_chr10_2610 TPM= 4.25 Transcript Type= NA
chr10	75397830	75401906	75397830	75401906	-	ENST00000372524.4@ZNF503	ENST00000372524.4	protein_coding	75401105,75397830	75401906,75400374	Gene ID= ENSG00000165655.16 TPM= 6.37 Transcript Type= protein_coding
chr10	77975149	78029545	77975149	78029545	-	ENST00000372371.7@POLR3A	ENST00000372371.7	protein_coding	78029364,78026094,78025622,78024971,78024549,78022145,78021860,78021546,78019162,78017575,78013650,78010471,78009864,78009537,78007702,78004716,78002197,78000976,77999981,77993197,77991054,77986073,77985903,77985170,77984205,77983920,77982653,77982154,77981428,77980141,77975149	78029545,78026229,78025759,78025142,78024703,78022384,78022022,78021682,78019265,78017716,78013790,78010540,78009991,78009675,78007866,78004888,78002308,78001094,78000118,77993367,77991167,77986159,77985985,77985340,77984298,77984012,77982817,77982318,77981559,77980273,77977626	Gene ID= ENSG00000148606.12 TPM= 5.31 Transcript Type= protein_coding
chr10	78033760	78040713	78033760	78040713	+	ENST00000435275.5@RPS24	ENST00000435275.5	protein_coding	78033760,78035352,78035511,78037194,78040201,78040615	78033904,78035417,78035720,78037304,78040225,78040713	Gene ID= ENSG00000138326.18 TPM= 26.71 Transcript Type= protein_coding
chr10	78033865	78040697	78033865	78040697	+	ENST00000372360.7@RPS24	ENST00000372360.7	protein_coding	78033865,78035352,78035511,78037194,78040615	78033904,78035417,78035720,78037304,78040697	Gene ID= ENSG00000138326.18 TPM= 3.35 Transcript Type= protein_coding
chr10	78033844	78040670	78033844	78040670	+	ENST00000485708.6@RPS24	ENST00000485708.6	protein_coding	78033844,78035352,78035511,78037194,78037965,78040204,78040615	78033904,78035417,78035720,78037304,78037982,78040225,78040670	Gene ID= ENSG00000138326.18 TPM= 130.01 Transcript Type= processed_transcript
chr10	78033883	78040697	78033883	78040697	+	ENST00000360830.8@RPS24	ENST00000360830.8	protein_coding	78033883,78035352,78035511,78037194,78040204,78040615	78033904,78035417,78035720,78037304,78040225,78040697	Gene ID= ENSG00000138326.18 TPM= 20.34 Transcript Type= protein_coding
chr10	78037904	78038854	78037904	78038854	-	transcript2633.chr10.nnic@NA	transcript2633.chr10.nnic	NA	78037904	78038854	Gene ID= novel_gene_chr10_2634 TPM= 21.24 Transcript Type= NA
chr10	79069025	79217526	79069025	79217526	+	transcript2640.chr10.nic@ZMIZ1	transcript2640.chr10.nic	protein_coding	79069025,79118915,79139682,79162053,79201584,79208336,79216169	79069270,79119024,79139777,79162133,79201692,79208449,79217526	Gene ID= ENSG00000108175.16 TPM= 2.12 Transcript Type= NA
chr10	79078721	79082532	79078721	79082532	-	transcript2654.chr10.nnic@NA	transcript2654.chr10.nnic	NA	79078721	79082532	Gene ID= novel_gene_chr10_2655 TPM= 2.12 Transcript Type= NA
chr10	79195596	79199043	79195596	79199043	+	transcript2650.chr10.nnic@NA	transcript2650.chr10.nnic	NA	79195596	79199043	Gene ID= novel_gene_chr10_2651 TPM= 2.12 Transcript Type= NA
chr10	79255804	79258396	79255804	79258396	+	transcript2652.chr10.nnic@NA	transcript2652.chr10.nnic	NA	79255804	79258396	Gene ID= novel_gene_chr10_2653 TPM= 2.12 Transcript Type= NA
chr10	79347478	79355337	79347478	79355337	+	ENST00000225174.7@PPIF	ENST00000225174.7	protein_coding	79347478,79349076,79349665,79351487,79352317,79353707	79347743,79349106,79349753,79351583,79352392,79355337	Gene ID= ENSG00000108179.13 TPM= 92.41 Transcript Type= protein_coding
chr10	79382325	79445627	79382325	79445627	-	ENST00000372336.3@ZCCHC24	ENST00000372336.3	protein_coding	79445195,79432558,79394276,79382325	79445627,79432758,79394440,79386458	Gene ID= ENSG00000165424.6 TPM= 49.92 Transcript Type= protein_coding
chr10	79691502	79826516	79691502	79826516	-	ENST00000601369.5@NUTM2B-AS1	ENST00000601369.5	antisense_RNA	79826198,79814613,79808759,79806039,79804485,79766271,79691502	79826516,79814716,79808832,79806122,79804527,79766324,79692056	Gene ID= ENSG00000225484.6 TPM= 13.99 Transcript Type= antisense_RNA
chr10	79691502	79826509	79691502	79826509	-	transcript2686.chr10.nic@NUTM2B-AS1	transcript2686.chr10.nic	antisense_RNA	79826198,79814613,79806039,79804485,79766271,79691502	79826509,79814716,79806122,79804527,79766324,79692056	Gene ID= ENSG00000225484.6 TPM= 4.43 Transcript Type= NA
chr10	79680682	79685305	79680682	79685305	-	transcript2695.chr10.nnic@NA	transcript2695.chr10.nnic	NA	79680682	79685305	Gene ID= novel_gene_chr10_2696 TPM= 7.44 Transcript Type= NA
chr10	79797791	79799152	79797791	79799152	+	transcript2693.chr10.nnic@NA	transcript2693.chr10.nnic	NA	79797791	79799152	Gene ID= novel_gene_chr10_2694 TPM= 2.12 Transcript Type= NA
chr10	79825902	79827602	79825902	79827602	+	ENST00000605920.1@AL135925.1	ENST00000605920.1	lincRNA	79825902	79827602	Gene ID= ENSG00000272447.1 TPM= 20.89 Transcript Type= lincRNA
chr10	80079266	80092550	80079266	80092550	+	transcript2703.chr10.nic@TMEM254	transcript2703.chr10.nic	protein_coding	80079266,80081640,80081841,80082145,80090797	80079307,80081741,80081944,80082204,80092550	Gene ID= ENSG00000133678.13 TPM= 3.19 Transcript Type= NA
chr10	80079270	80092557	80079270	80092557	+	ENST00000467529.5@TMEM254	ENST00000467529.5	protein_coding	80079270,80081841,80082145,80090797	80079307,80081944,80082204,80092557	Gene ID= ENSG00000133678.13 TPM= 2.12 Transcript Type= processed_transcript
chr10	80078670	80092557	80078670	80092557	+	ENST00000372281.7@TMEM254	ENST00000372281.7	protein_coding	80078670,80081841,80082145,80090797	80078786,80081944,80082204,80092557	Gene ID= ENSG00000133678.13 TPM= 8.5 Transcript Type= protein_coding
chr10	80078691	80081254	80078691	80081254	+	transcript2710.chr10.nnic@NA	transcript2710.chr10.nnic	NA	80078691	80081254	Gene ID= novel_gene_chr10_2711 TPM= 2.12 Transcript Type= NA
chr10	80132721	80145359	80132721	80145359	+	ENST00000372263.3@PLAC9	ENST00000372263.3	protein_coding	80132721,80142082,80144223,80144900	80132826,80142179,80144343,80145359	Gene ID= ENSG00000189129.13 TPM= 1.06 Transcript Type= protein_coding
chr10	80155124	80205572	80155124	80205572	-	ENST00000422982.7@ANXA11	ENST00000422982.7	protein_coding	80205343,80176107,80172807,80170800,80168969,80167226,80166890,80166084,80164053,80163534,80163349,80161935,80159100,80157967,80157641,80155124	80205572,80176155,80172869,80170915,80169358,80167313,80166984,80166197,80164143,80163613,80163405,80162028,80159195,80158025,80157763,80155912	Gene ID= ENSG00000122359.17 TPM= 29.62 Transcript Type= protein_coding
chr10	80152610	80154789	80152610	80154789	-	transcript2748.chr10.nnic@NA	transcript2748.chr10.nnic	NA	80152610	80154789	Gene ID= novel_gene_chr10_2749 TPM= 9.56 Transcript Type= NA
chr10	80201972	80205536	80201972	80205536	-	transcript2758.chr10.nnic@NA	transcript2758.chr10.nnic	NA	80201972	80205536	Gene ID= novel_gene_chr10_2759 TPM= 5.31 Transcript Type= NA
chr10	80408486	80432996	80408486	80432996	+	ENST00000615554.4@FAM213A	ENST00000615554.4	protein_coding	80408486,80420000,80422417,80425866,80427332,80431986	80408643,80420645,80422508,80426006,80427496,80432996	Gene ID= ENSG00000122378.13 TPM= 4.78 Transcript Type= protein_coding
chr10	80408494	80432997	80408494	80432997	+	ENST00000372185.5@FAM213A	ENST00000372185.5	protein_coding	80408494,80420483,80422417,80425866,80427332,80431986	80408643,80420645,80422508,80426006,80427496,80432997	Gene ID= ENSG00000122378.13 TPM= 18.59 Transcript Type= protein_coding
chr10	80454316	80519628	80454316	80519628	+	transcript2773.chr10.nnic@TSPAN14	transcript2773.chr10.nnic	protein_coding	80454316,80468547,80504728,80507228,80509301,80512144,80514019,80516204,80517905	80454371,80468687,80504778,80507374,80509471,80512269,80514063,80516323,80519628	Gene ID= ENSG00000108219.14 TPM= 10.62 Transcript Type= NA
chr10	84139440	84153245	84139440	84153245	+	ENST00000372134.5@GHITM	ENST00000372134.5	protein_coding	84139440,84141462,84142655,84143995,84144875,84148730,84150055,84150709,84152264	84139593,84141629,84142754,84144106,84145016,84148838,84150243,84150880,84153245	Gene ID= ENSG00000165678.20 TPM= 288.46 Transcript Type= protein_coding
chr10	84328544	84470425	84328544	84470425	+	transcript2793.chr10.nic@CCSER2	transcript2793.chr10.nic	protein_coding	84328544,84371014,84373619,84417771,84425731,84438512,84463933,84470372	84328808,84372469,84373815,84417861,84425893,84438707,84464016,84470425	Gene ID= ENSG00000107771.15 TPM= 81.26 Transcript Type= NA
chr10	84424947	84514804	84424947	84514804	+	transcript2803.chr10.nnic@CCSER2	transcript2803.chr10.nnic	protein_coding	84424947,84425731,84438512,84463933,84470372,84477575,84499875,84513449	84425048,84425893,84438707,84464016,84470458,84477664,84500007,84514804	Gene ID= ENSG00000107771.15 TPM= 4.25 Transcript Type= NA
chr10	84424939	84518521	84424939	84518521	+	ENST00000543283.2@CCSER2	ENST00000543283.2	protein_coding	84424939,84425731,84438512,84463933,84470372,84477575,84499875,84513449	84425048,84425893,84438707,84464016,84470458,84477664,84499959,84518521	Gene ID= ENSG00000107771.15 TPM= 18.06 Transcript Type= protein_coding
chr10	85599555	86366478	85599555	86366478	-	ENST00000327946.11@GRID1	ENST00000327946.11	protein_coding	86366314,86363941,86206364,86138819,85916186,85869010,85856029,85854496,85729513,85727855,85724352,85723003,85647202,85619867,85613407,85599555	86366478,86364096,86206648,86139024,85916239,85869180,85856190,85854615,85729614,85728052,85724676,85723141,85647397,85620033,85613647,85602701	Gene ID= ENSG00000182771.18 TPM= 1.06 Transcript Type= protein_coding
chr10	86133913	86366835	86133913	86366835	-	transcript2814.chr10.nnic@GRID1	transcript2814.chr10.nnic	protein_coding	86366314,86363941,86206364,86138819,86133913	86366835,86364096,86206648,86139024,86134479	Gene ID= ENSG00000182771.18 TPM= 13.81 Transcript Type= NA
chr10	86467347	86521828	86467347	86521828	-	transcript2822.chr10.nnic@WAPL	transcript2822.chr10.nnic	protein_coding	86521365,86517571,86499718,86497201,86473878,86472612,86472208,86470992,86467347	86521828,86518091,86500743,86497301,86473973,86472764,86472344,86471103,86467506	Gene ID= ENSG00000062650.18 TPM= 3.19 Transcript Type= NA
chr10	86497238	86521828	86497238	86521828	-	transcript2825.chr10.nic@WAPL	transcript2825.chr10.nic	protein_coding	86521365,86517571,86499718,86497238	86521828,86518091,86500743,86497319	Gene ID= ENSG00000062650.18 TPM= 5.31 Transcript Type= NA
chr10	86498394	86521777	86498394	86521777	-	transcript2826.chr10.nic@WAPL	transcript2826.chr10.nic	protein_coding	86521365,86517571,86498394	86521777,86518091,86500743	Gene ID= ENSG00000062650.18 TPM= 3.19 Transcript Type= NA
chr10	86435256	86521815	86435256	86521815	-	ENST00000298767.9@WAPL	ENST00000298767.9	protein_coding	86521365,86517571,86499718,86497201,86473878,86472612,86472208,86470992,86467279,86461176,86460399,86458989,86453656,86453220,86451967,86446242,86443275,86437920,86435256	86521815,86518091,86500743,86497319,86473973,86472764,86472344,86471103,86467506,86461287,86460496,86459065,86453831,86453335,86452131,86446449,86443363,86438015,86437608	Gene ID= ENSG00000062650.18 TPM= 14.87 Transcript Type= protein_coding
chr10	86521947	86522684	86521947	86522684	+	transcript2829.chr10.nnic@NA	transcript2829.chr10.nnic	NA	86521947	86522684	Gene ID= novel_gene_chr10_2830 TPM= 2.12 Transcript Type= NA
chr10	86652255	86656964	86652255	86656964	+	transcript2903.chr10.nnic@NA	transcript2903.chr10.nnic	NA	86652255	86656964	Gene ID= novel_gene_chr10_2904 TPM= 10.62 Transcript Type= NA
chr10	86668409	86735279	86668409	86735279	+	transcript2832.chr10.nic@LDB3	transcript2832.chr10.nic	protein_coding	86668409,86668669,86679367,86680082,86681436,86691896,86692535,86706531,86709905,86716327,86717964,86718727,86726137,86732887	86668570,86668784,86679518,86680157,86681803,86692065,86692571,86706719,86710050,86716771,86718144,86718847,86726252,86735279	Gene ID= ENSG00000122367.19 TPM= 139.04 Transcript Type= NA
chr10	86668409	86735279	86668409	86735279	+	transcript2836.chr10.nic@LDB3	transcript2836.chr10.nic	protein_coding	86668409,86668669,86679367,86680082,86681436,86691896,86692535,86709905,86716327,86717964,86718727,86726137,86732887	86668570,86668784,86679518,86680157,86681803,86692065,86692571,86710050,86716771,86718144,86718847,86726252,86735279	Gene ID= ENSG00000122367.19 TPM= 148.07 Transcript Type= NA
chr10	86668409	86700045	86668409	86700045	+	transcript2856.chr10.nic@LDB3	transcript2856.chr10.nic	protein_coding	86668409,86668669,86679367,86680082,86685678,86687069,86691896,86692535,86699278	86668570,86668784,86679518,86680157,86685700,86687272,86692065,86692571,86700045	Gene ID= ENSG00000122367.19 TPM= 48.08 Transcript Type= NA
chr10	86666703	86700045	86666703	86700045	+	transcript2859.chr10.nnic@LDB3	transcript2859.chr10.nnic	protein_coding	86666703,86668669,86679367,86680082,86681436,86691896,86692535,86699278	86666848,86668784,86679518,86680157,86681803,86692065,86692571,86700045	Gene ID= ENSG00000122367.19 TPM= 116.25 Transcript Type= NA
chr10	86668409	86700045	86668409	86700045	+	transcript2864.chr10.nic@LDB3	transcript2864.chr10.nic	protein_coding	86668409,86668669,86679367,86680082,86681436,86691896,86692535,86699278	86668570,86668784,86679518,86680157,86681803,86692065,86692571,86700045	Gene ID= ENSG00000122367.19 TPM= 184.92 Transcript Type= NA
chr10	86668692	86700045	86668692	86700045	+	ENST00000623007.3@LDB3	ENST00000623007.3	protein_coding	86668692,86679367,86680082,86681436,86691896,86692535,86699278	86668784,86679518,86680157,86681803,86692065,86692571,86700045	Gene ID= ENSG00000122367.19 TPM= 56.42 Transcript Type= protein_coding
chr10	86716645	86735279	86716645	86735279	+	transcript2873.chr10.nnic@LDB3	transcript2873.chr10.nnic	protein_coding	86716645,86716709,86717964,86718727,86726137,86732887	86716652,86716771,86718144,86718847,86726252,86735279	Gene ID= ENSG00000122367.19 TPM= 329.18 Transcript Type= NA
chr10	86689653	86700045	86689653	86700045	+	transcript2878.chr10.nic@LDB3	transcript2878.chr10.nic	protein_coding	86689653,86692535,86699278	86692065,86692571,86700045	Gene ID= ENSG00000122367.19 TPM= 14.92 Transcript Type= NA
chr10	86668613	86700041	86668613	86700041	+	ENST00000372066.7@LDB3	ENST00000372066.7	protein_coding	86668613,86679367,86680082,86685678,86687069,86691896,86692535,86699278	86668784,86679518,86680157,86685700,86687272,86692065,86692571,86700041	Gene ID= ENSG00000122367.19 TPM= 36.57 Transcript Type= protein_coding
chr10	86668692	86700045	86668692	86700045	+	ENST00000372056.8@LDB3	ENST00000372056.8	protein_coding	86668692,86679367,86680082,86681436,86687069,86691896,86692535,86699278	86668784,86679518,86680157,86681803,86687272,86692065,86692571,86700045	Gene ID= ENSG00000122367.19 TPM= 43.41 Transcript Type= protein_coding
chr10	86668692	86734995	86668692	86734995	+	ENST00000263066.10@LDB3	ENST00000263066.10	protein_coding	86668692,86679367,86680082,86685678,86687069,86691896,86692535,86709905,86716327,86717964,86718727,86726137,86732887	86668784,86679518,86680157,86685700,86687272,86692065,86692571,86710050,86716771,86718144,86718847,86726252,86734995	Gene ID= ENSG00000122367.19 TPM= 16.02 Transcript Type= protein_coding
chr10	86668830	86674690	86668830	86674690	+	transcript2911.chr10.nnic@NA	transcript2911.chr10.nnic	NA	86668830	86674690	Gene ID= novel_gene_chr10_2912 TPM= 4.25 Transcript Type= NA
chr10	86674620	86676576	86674620	86676576	+	transcript2913.chr10.nnic@NA	transcript2913.chr10.nnic	NA	86674620	86676576	Gene ID= novel_gene_chr10_2914 TPM= 6.37 Transcript Type= NA
chr10	86678342	86682858	86678342	86682858	-	transcript2923.chr10.nnic@NA	transcript2923.chr10.nnic	NA	86678342	86682858	Gene ID= novel_gene_chr10_2924 TPM= 39.3 Transcript Type= NA
chr10	86680652	86686665	86680652	86686665	+	transcript2891.chr10.nnic@NA	transcript2891.chr10.nnic	NA	86680652	86686665	Gene ID= novel_gene_chr10_2892 TPM= 84.97 Transcript Type= NA
chr10	86686498	86687690	86686498	86687690	+	transcript2917.chr10.nnic@NA	transcript2917.chr10.nnic	NA	86686498	86687690	Gene ID= novel_gene_chr10_2918 TPM= 10.62 Transcript Type= NA
chr10	86697528	86699427	86697528	86699427	-	transcript2925.chr10.nnic@NA	transcript2925.chr10.nnic	NA	86697528	86699427	Gene ID= novel_gene_chr10_2926 TPM= 191.19 Transcript Type= NA
chr10	86704579	86705495	86704579	86705495	-	transcript2931.chr10.nnic@NA	transcript2931.chr10.nnic	NA	86704579	86705495	Gene ID= novel_gene_chr10_2932 TPM= 9.56 Transcript Type= NA
chr10	86714555	86716492	86714555	86716492	-	transcript2937.chr10.nnic@NA	transcript2937.chr10.nnic	NA	86714555	86716492	Gene ID= novel_gene_chr10_2938 TPM= 33.99 Transcript Type= NA
chr10	86718995	86720451	86718995	86720451	+	transcript2907.chr10.nnic@NA	transcript2907.chr10.nnic	NA	86718995	86720451	Gene ID= novel_gene_chr10_2908 TPM= 3.19 Transcript Type= NA
chr10	86724529	86726041	86724529	86726041	-	transcript2945.chr10.nnic@NA	transcript2945.chr10.nnic	NA	86724529	86726041	Gene ID= novel_gene_chr10_2946 TPM= 3.19 Transcript Type= NA
chr10	86727019	86730228	86727019	86730228	-	transcript2939.chr10.nnic@NA	transcript2939.chr10.nnic	NA	86727019	86730228	Gene ID= novel_gene_chr10_2940 TPM= 26.55 Transcript Type= NA
chr10	86735556	86739808	86735556	86739808	+	transcript2901.chr10.nnic@NA	transcript2901.chr10.nnic	NA	86735556	86739808	Gene ID= novel_gene_chr10_2902 TPM= 91.35 Transcript Type= NA
chr10	86742069	86742947	86742069	86742947	-	transcript2962.chr10.nnic@NA	transcript2962.chr10.nnic	NA	86742069	86742947	Gene ID= novel_gene_chr10_2963 TPM= 4.25 Transcript Type= NA
chr10	86755827	86925184	86755827	86925184	+	transcript2950.chr10.nnic@BMPR1A	transcript2950.chr10.nnic	protein_coding	86755827,86838865,86875867,86890062,86892127,86899794,86900027,86912240,86917134,86919172,86921520,86923376,86923594	86755963,86838979,86876085,86890224,86892229,86899890,86900126,86912384,86917326,86919469,86921695,86923506,86925184	Gene ID= ENSG00000107779.13 TPM= 5.84 Transcript Type= NA
chr10	86755833	86925184	86755833	86925184	+	transcript2951.chr10.nnic@BMPR1A	transcript2951.chr10.nnic	protein_coding	86755833,86838865,86875867,86890062,86892127,86899794,86900027,86912240,86917134,86919172,86921520,86923376,86923594	86756104,86838979,86876085,86890224,86892229,86899890,86900126,86912384,86917326,86919469,86921695,86923506,86925184	Gene ID= ENSG00000107779.13 TPM= 5.84 Transcript Type= NA
chr10	86765991	86767768	86765991	86767768	-	transcript2960.chr10.nnic@NA	transcript2960.chr10.nnic	NA	86765991	86767768	Gene ID= novel_gene_chr10_2961 TPM= 7.44 Transcript Type= NA
chr10	86778929	86781907	86778929	86781907	-	transcript2964.chr10.nnic@NA	transcript2964.chr10.nnic	NA	86778929	86781907	Gene ID= novel_gene_chr10_2965 TPM= 4.25 Transcript Type= NA
chr10	86791217	86791690	86791217	86791690	-	transcript2966.chr10.nnic@NA	transcript2966.chr10.nnic	NA	86791217	86791690	Gene ID= novel_gene_chr10_2967 TPM= 2.12 Transcript Type= NA
chr10	86805463	86809697	86805463	86809697	-	transcript2968.chr10.nnic@NA	transcript2968.chr10.nnic	NA	86805463	86809697	Gene ID= novel_gene_chr10_2969 TPM= 2.12 Transcript Type= NA
chr10	86925919	86927967	86925919	86927967	+	transcript2981.chr10.nnic@NA	transcript2981.chr10.nnic	NA	86925919	86927967	Gene ID= novel_gene_chr10_2982 TPM= 4.25 Transcript Type= NA
chr10	86935540	86957863	86935540	86957863	-	ENST00000372027.9@MMRN2	ENST00000372027.9	protein_coding	86957378,86945561,86945370,86945188,86944262,86942317,86935540	86957863,86945689,86945476,86945268,86944435,86944128,86937125	Gene ID= ENSG00000173269.13 TPM= 15.93 Transcript Type= protein_coding
chr10	86958656	86963260	86958656	86963260	+	ENST00000372017.3@SNCG	ENST00000372017.3	protein_coding	86958656,86959633,86960001,86962604,86962965	86958818,86959674,86960128,86962675,86963260	Gene ID= ENSG00000173267.13 TPM= 8.5 Transcript Type= protein_coding
chr10	86968192	86970915	86968192	86970915	+	ENST00000372013.7@ADIRF	ENST00000372013.7	protein_coding	86968192,86970200,86970476	86968605,86970262,86970915	Gene ID= ENSG00000148671.13 TPM= 41.42 Transcript Type= protein_coding
chr10	87040400	87041413	87040400	87041413	-	transcript2985.chr10.nnic@NA	transcript2985.chr10.nnic	NA	87040400	87041413	Gene ID= novel_gene_chr10_2986 TPM= 4.25 Transcript Type= NA
chr10	87041903	87042442	87041903	87042442	-	transcript2987.chr10.nnic@NA	transcript2987.chr10.nnic	NA	87041903	87042442	Gene ID= novel_gene_chr10_2988 TPM= 3.19 Transcript Type= NA
chr10	87050486	87094866	87050486	87094866	-	ENST00000277865.4@GLUD1	ENST00000277865.4	protein_coding	87094325,87076576,87075968,87074551,87068063,87062656,87060915,87060688,87060161,87059150,87057691,87053342,87050486	87094866,87076656,87076023,87074614,87068157,87062835,87061052,87060825,87060241,87059273,87057782,87053404,87051870	Gene ID= ENSG00000148672.8 TPM= 108.34 Transcript Type= protein_coding
chr10	87095166	87191463	87095166	87191463	+	transcript2998.chr10.nnic@FAM35A	transcript2998.chr10.nnic	protein_coding	87095166,87096934,87151350,87156694,87158048,87170478,87170840,87175889,87180075,87187085,87190484	87095248,87096989,87152879,87156837,87158155,87170672,87170974,87176095,87180303,87187200,87191463	Gene ID= ENSG00000122376.11 TPM= 2.12 Transcript Type= NA
chr10	87095196	87191468	87095196	87191468	+	ENST00000298786.4@FAM35A	ENST00000298786.4	protein_coding	87095196,87096934,87151350,87158048,87170478,87170840,87175889,87180075,87187085,87190484	87095248,87096989,87152879,87158155,87170672,87170974,87176095,87180303,87187200,87191468	Gene ID= ENSG00000122376.11 TPM= 8.5 Transcript Type= protein_coding
chr10	87208172	87342519	87208172	87342519	-	transcript3010.chr10.nnic@NUTM2A-AS1	transcript3010.chr10.nnic	antisense_RNA	87342242,87336786,87326630,87307957,87288442,87246115,87208172	87342519,87336889,87326672,87308060,87288495,87246212,87208512	Gene ID= ENSG00000223482.7 TPM= 4.25 Transcript Type= NA
chr10	87244132	87342612	87244132	87342612	-	ENST00000446751.5@NUTM2A-AS1	ENST00000446751.5	antisense_RNA	87342242,87336786,87326630,87288442,87246115,87244132	87342612,87336889,87326672,87288495,87246212,87245855	Gene ID= ENSG00000223482.7 TPM= 3.19 Transcript Type= antisense_RNA
chr10	87332965	87342519	87332965	87342519	-	transcript3026.chr10.nic@NUTM2A-AS1	transcript3026.chr10.nic	antisense_RNA	87342242,87336786,87332965	87342519,87336889,87334814	Gene ID= ENSG00000223482.7 TPM= 2.12 Transcript Type= NA
chr10	87207625	87208490	87207625	87208490	-	transcript3030.chr10.nnic@NA	transcript3030.chr10.nnic	NA	87207625	87208490	Gene ID= novel_gene_chr10_3031 TPM= 2.12 Transcript Type= NA
chr10	87212425	87213100	87212425	87213100	+	transcript3028.chr10.nnic@NA	transcript3028.chr10.nnic	NA	87212425	87213100	Gene ID= novel_gene_chr10_3029 TPM= 16.99 Transcript Type= NA
chr10	87225448	87234978	87225448	87234978	+	ENST00000381707.6@NUTM2A	ENST00000381707.6	protein_coding	87225448,87228263,87230920,87232021,87232603,87233473,87233923	87226212,87228962,87231048,87232160,87232985,87233589,87234978	Gene ID= ENSG00000184923.12 TPM= 2.12 Transcript Type= protein_coding
chr10	87504875	87553388	87504875	87553388	+	ENST00000371996.8@MINPP1	ENST00000371996.8	protein_coding	87504875,87508336,87513124,87521036,87552082	87505552,87508533,87513221,87521169,87553388	Gene ID= ENSG00000107789.15 TPM= 15.4 Transcript Type= protein_coding
chr10	87504875	87553388	87504875	87553388	+	transcript3037.chr10.nnic@MINPP1	transcript3037.chr10.nnic	protein_coding	87504875,87508336,87513124,87552082	87505552,87508533,87513221,87553388	Gene ID= ENSG00000107789.15 TPM= 2.66 Transcript Type= NA
chr10	87659613	87747705	87659613	87747705	+	ENST00000361175.8@PAPSS2	ENST00000361175.8	protein_coding	87659613,87709196,87713075,87714044,87714745,87714985,87715732,87727284,87741235,87743373,87745002,87745832	87660008,87709313,87713310,87714182,87714863,87715098,87715843,87727489,87741370,87743641,87745231,87747705	Gene ID= ENSG00000198682.12 TPM= 4.25 Transcript Type= protein_coding
chr10	87748284	87749189	87748284	87749189	-	transcript3068.chr10.nnic@NA	transcript3068.chr10.nnic	NA	87748284	87749189	Gene ID= novel_gene_chr10_3069 TPM= 2.12 Transcript Type= NA
chr10	87751851	87818268	87751851	87818268	-	transcript3050.chr10.nnic@ATAD1	transcript3050.chr10.nnic	protein_coding	87818167,87814438,87792657,87790310,87784470,87776321,87770952,87767673,87756789,87751851	87818268,87814612,87792755,87790430,87784670,87776427,87771041,87767723,87756922,87754807	Gene ID= ENSG00000138138.13 TPM= 10.62 Transcript Type= NA
chr10	87863113	87971930	87863113	87971930	+	ENST00000371953.7@PTEN	ENST00000371953.7	protein_coding	87863113,87894025,87925513,87931046,87933013,87952118,87957853,87960894,87965287	87864548,87894109,87925557,87931089,87933251,87952259,87958019,87961118,87971930	Gene ID= ENSG00000171862.10 TPM= 40.36 Transcript Type= protein_coding
chr10	87863447	87961309	87863447	87961309	+	transcript3081.chr10.nic@PTEN	transcript3081.chr10.nic	protein_coding	87863447,87894025,87925513,87931046,87933013,87952118,87957853,87960894	87864548,87894109,87925557,87931089,87933251,87952259,87958019,87961309	Gene ID= ENSG00000171862.10 TPM= 3.19 Transcript Type= NA
chr10	87863496	87867040	87863496	87867040	+	transcript3085.chr10.nnic@NA	transcript3085.chr10.nnic	NA	87863496	87867040	Gene ID= novel_gene_chr10_3086 TPM= 3.19 Transcript Type= NA
chr10	87869220	87871650	87869220	87871650	-	transcript3087.chr10.nnic@NA	transcript3087.chr10.nnic	NA	87869220	87871650	Gene ID= novel_gene_chr10_3088 TPM= 15.93 Transcript Type= NA
chr10	88273547	88362728	88273547	88362728	-	transcript3093.chr10.nic@RNLS	transcript3093.chr10.nic	protein_coding	88362552,88314466,88273547	88362728,88314641,88275032	Gene ID= ENSG00000184719.11 TPM= 2.12 Transcript Type= NA
chr10	88273864	88584530	88273864	88584530	-	ENST00000371947.7@RNLS	ENST00000371947.7	protein_coding	88583073,88582202,88581567,88572903,88362552,88314466,88273864	88584530,88582307,88581709,88573061,88362725,88314641,88275032	Gene ID= ENSG00000184719.11 TPM= 1.06 Transcript Type= protein_coding
chr10	88284959	88583213	88284959	88583213	-	ENST00000331772.8@RNLS	ENST00000331772.8	protein_coding	88583073,88582202,88581567,88572903,88362552,88314466,88284959	88583213,88582307,88581709,88573061,88362725,88314641,88285506	Gene ID= ENSG00000184719.11 TPM= 5.31 Transcript Type= protein_coding
chr10	88582922	88584528	88582922	88584528	+	transcript3100.chr10.nnic@NA	transcript3100.chr10.nnic	NA	88582922	88584528	Gene ID= novel_gene_chr10_3101 TPM= 2.12 Transcript Type= NA
chr10	88879734	88923487	88879734	88923487	+	ENST00000371926.7@STAMBPL1	ENST00000371926.7	protein_coding	88879734,88901656,88905443,88908702,88910916,88913101,88914534,88916680,88921283,88922337,88923168	88880638,88901738,88905660,88908777,88911011,88913458,88914658,88916817,88921395,88922436,88923487	Gene ID= ENSG00000138134.11 TPM= 5.31 Transcript Type= protein_coding
chr10	88935074	88991365	88935074	88991365	-	transcript3108.chr10.nic@ACTA2	transcript3108.chr10.nic	protein_coding	88990939,88948802,88947258,88943797,88941785,88941229,88939507,88938061,88935074	88991365,88948953,88947386,88943907,88941869,88941390,88939698,88938242,88935366	Gene ID= ENSG00000107796.13 TPM= 5.31 Transcript Type= NA
chr10	88935074	88952773	88935074	88952773	-	ENST00000224784.10@ACTA2	ENST00000224784.10	protein_coding	88952731,88948802,88947258,88943797,88941785,88941229,88939507,88938061,88935074	88952773,88948953,88947386,88943907,88941869,88941390,88939698,88938242,88935366	Gene ID= ENSG00000107796.13 TPM= 164.63 Transcript Type= protein_coding
chr10	88990047	88991332	88990047	88991332	-	transcript3113.chr10.nnic@NA	transcript3113.chr10.nnic	NA	88990047	88991332	Gene ID= novel_gene_chr10_3114 TPM= 3.19 Transcript Type= NA
chr10	88990657	89015785	88990657	89015785	+	ENST00000355740.6@FAS	ENST00000355740.6	protein_coding	88990657,89003029,89007700,89008889,89010539,89010753,89011999,89013343,89014119	88990906,89003194,89007837,89008997,89010600,89010815,89012081,89013367,89015785	Gene ID= ENSG00000026103.21 TPM= 1.06 Transcript Type= protein_coding
chr10	89205941	89207320	89205941	89207320	-	transcript3115.chr10.nnic@NA	transcript3115.chr10.nnic	NA	89205941	89207320	Gene ID= novel_gene_chr10_3116 TPM= 5.31 Transcript Type= NA
chr10	89213569	89252058	89213569	89252058	-	ENST00000336233.9@LIPA	ENST00000336233.9	protein_coding	89251737,89247538,89245676,89228200,89226895,89225092,89223684,89222511,89215938,89213569	89252058,89247649,89245793,89228398,89227004,89225228,89223830,89222582,89216009,89215061	Gene ID= ENSG00000107798.17 TPM= 23.37 Transcript Type= protein_coding
chr10	89250109	89251847	89250109	89251847	-	transcript3122.chr10.nnic@NA	transcript3122.chr10.nnic	NA	89250109	89251847	Gene ID= novel_gene_chr10_3123 TPM= 2.12 Transcript Type= NA
chr10	89327894	89340971	89327894	89340971	+	ENST00000371818.8@IFIT3	ENST00000371818.8	protein_coding	89327894,89338661	89328078,89340971	Gene ID= ENSG00000119917.13 TPM= 3.72 Transcript Type= protein_coding
chr10	89332484	89340971	89332484	89340971	+	ENST00000371811.4@IFIT3	ENST00000371811.4	protein_coding	89332484,89338661	89332627,89340971	Gene ID= ENSG00000119917.13 TPM= 10.09 Transcript Type= protein_coding
chr10	89330996	89331688	89330996	89331688	-	transcript3144.chr10.nnic@NA	transcript3144.chr10.nnic	NA	89330996	89331688	Gene ID= novel_gene_chr10_3145 TPM= 2.12 Transcript Type= NA
chr10	89392546	89403988	89392546	89403988	+	ENST00000371804.3@IFIT1	ENST00000371804.3	protein_coding	89392546,89402281	89392717,89403988	Gene ID= ENSG00000185745.9 TPM= 10.62 Transcript Type= protein_coding
chr10	89413858	89415403	89413858	89415403	-	transcript3146.chr10.nnic@NA	transcript3146.chr10.nnic	NA	89413858	89415403	Gene ID= novel_gene_chr10_3147 TPM= 4.25 Transcript Type= NA
chr10	89579497	89645572	89579497	89645572	-	ENST00000307534.8@PANK1	ENST00000307534.8	protein_coding	89644600,89611696,89599252,89593813,89593197,89588652,89579497	89645572,89612048,89599505,89593989,89593320,89588777,89584465	Gene ID= ENSG00000152782.16 TPM= 5.31 Transcript Type= protein_coding
chr10	90871944	90905643	90871944	90905643	+	transcript3157.chr10.nic@RPP30	transcript3157.chr10.nic	protein_coding	90871944,90874869,90875558,90876024,90879063,90885812,90894775,90895454,90895880,90896313,90900570,90902243,90903192,90905302	90872068,90874924,90875614,90876098,90879134,90885901,90894891,90895483,90895917,90896392,90900668,90902344,90903276,90905643	Gene ID= ENSG00000148688.13 TPM= 3.19 Transcript Type= NA
chr10	90871716	90902190	90871716	90902190	+	ENST00000371703.7@RPP30	ENST00000371703.7	protein_coding	90871716,90874869,90875558,90876024,90879063,90885812,90894775,90895454,90895880,90896313,90900570	90872068,90874924,90875614,90876098,90879134,90885901,90894891,90895483,90895917,90896392,90902190	Gene ID= ENSG00000148688.13 TPM= 8.5 Transcript Type= protein_coding
chr10	90910249	90912319	90910249	90912319	+	transcript3218.chr10.nnic@NA	transcript3218.chr10.nnic	NA	90910249	90912319	Gene ID= novel_gene_chr10_3219 TPM= 19.12 Transcript Type= NA
chr10	90912096	90921276	90912096	90921276	-	ENST00000371697.3@ANKRD1	ENST00000371697.3	protein_coding	90921001,90920169,90919131,90918865,90917732,90916171,90915782,90915543,90912096	90921276,90920348,90919268,90918972,90917830,90916269,90915880,90915641,90912976	Gene ID= ENSG00000148677.6 TPM= 5031.46 Transcript Type= protein_coding
chr10	90966021	90967578	90966021	90967578	+	transcript3246.chr10.nnic@NA	transcript3246.chr10.nnic	NA	90966021	90967578	Gene ID= novel_gene_chr10_3247 TPM= 3.19 Transcript Type= NA
chr10	90966022	90981759	90966022	90981759	+	transcript3240.chr10.nnic@NA	transcript3240.chr10.nnic	NA	90966022,90980575	90966354,90981759	Gene ID= novel_gene_chr10_3241 TPM= 2.12 Transcript Type= NA
chr10	90971441	90976006	90971441	90976006	+	transcript3244.chr10.nnic@NA	transcript3244.chr10.nnic	NA	90971441	90976006	Gene ID= novel_gene_chr10_3245 TPM= 5.31 Transcript Type= NA
chr10	90979365	90981757	90979365	90981757	+	transcript3248.chr10.nnic@NA	transcript3248.chr10.nnic	NA	90979365	90981757	Gene ID= novel_gene_chr10_3249 TPM= 3.19 Transcript Type= NA
chr10	90992097	90995989	90992097	90995989	-	transcript3252.chr10.nnic@NA	transcript3252.chr10.nnic	NA	90992097	90995989	Gene ID= novel_gene_chr10_3253 TPM= 2.12 Transcript Type= NA
chr10	90992124	90993682	90992124	90993682	+	transcript3250.chr10.nnic@NA	transcript3250.chr10.nnic	NA	90992124	90993682	Gene ID= novel_gene_chr10_3251 TPM= 2.12 Transcript Type= NA
chr10	91162842	91280978	91162842	91280978	+	transcript3268.chr10.nnic@PCGF5	transcript3268.chr10.nnic	protein_coding	91162842,91222689,91240484,91248505,91248665,91251292,91261326,91264431,91278269	91163081,91222983,91240580,91248560,91248724,91251440,91261424,91264520,91280978	Gene ID= ENSG00000180628.14 TPM= 6.37 Transcript Type= NA
chr10	91220656	91280978	91220656	91280978	+	transcript3271.chr10.nnic@PCGF5	transcript3271.chr10.nnic	protein_coding	91220656,91222689,91240484,91248505,91248665,91251292,91261326,91264431,91278269	91220836,91222983,91240580,91248560,91248724,91251440,91261424,91264520,91280978	Gene ID= ENSG00000180628.14 TPM= 7.44 Transcript Type= NA
chr10	91162842	91227960	91162842	91227960	+	transcript3279.chr10.nic@PCGF5	transcript3279.chr10.nic	protein_coding	91162842,91222689,91227337	91163081,91222983,91227960	Gene ID= ENSG00000180628.14 TPM= 8.5 Transcript Type= NA
chr10	91220783	91227960	91220783	91227960	+	ENST00000490164.1@PCGF5	ENST00000490164.1	protein_coding	91220783,91222689,91227337	91220836,91222983,91227960	Gene ID= ENSG00000180628.14 TPM= 24.43 Transcript Type= processed_transcript
chr10	91234002	91237754	91234002	91237754	+	transcript3289.chr10.nnic@NA	transcript3289.chr10.nnic	NA	91234002	91237754	Gene ID= novel_gene_chr10_3290 TPM= 3.19 Transcript Type= NA
chr10	91254334	91256393	91254334	91256393	+	transcript3291.chr10.nnic@NA	transcript3291.chr10.nnic	NA	91254334	91256393	Gene ID= novel_gene_chr10_3292 TPM= 2.12 Transcript Type= NA
chr10	91410345	91514761	91410345	91514761	+	ENST00000298068.9@HECTD2	ENST00000298068.9	protein_coding	91410345,91425281,91460427,91461254,91462095,91478201,91481094,91482967,91484507,91485180,91487682,91491200,91492352,91493420,91496214,91498108,91498872,91499044,91500502,91501191,91512264	91410576,91425410,91460565,91461356,91462184,91478265,91481139,91483076,91484655,91485303,91487778,91491307,91492484,91493508,91496372,91498182,91498959,91499150,91500617,91501334,91514761	Gene ID= ENSG00000165338.16 TPM= 4.25 Transcript Type= protein_coding
chr10	91410344	91463664	91410344	91463664	+	ENST00000371681.8@HECTD2	ENST00000371681.8	protein_coding	91410344,91425281,91460427,91461254,91462095	91410576,91425410,91460565,91461356,91463664	Gene ID= ENSG00000165338.16 TPM= 6.37 Transcript Type= protein_coding
chr10	91628442	91633054	91628442	91633054	-	ENST00000238994.5@PPP1R3C	ENST00000238994.5	protein_coding	91632956,91628442	91633054,91630866	Gene ID= ENSG00000119938.8 TPM= 298.47 Transcript Type= protein_coding
chr10	91798312	91865276	91798312	91865276	+	ENST00000371627.4@TNKS2	ENST00000371627.4	protein_coding	91798312,91812983,91817134,91819270,91819482,91819939,91822296,91827017,91828285,91830923,91831103,91833853,91836919,91840561,91841283,91842172,91844919,91845752,91848383,91849512,91851216,91855029,91855614,91857425,91859462,91861999,91862937	91798889,91813207,91817229,91819306,91819557,91820033,91822362,91827203,91828406,91831014,91831181,91834024,91836998,91840706,91841448,91842391,91845028,91845940,91848635,91849594,91851336,91855126,91855688,91857530,91859648,91862155,91865276	Gene ID= ENSG00000107854.5 TPM= 5.84 Transcript Type= protein_coding
chr10	91798456	91842749	91798456	91842749	+	transcript3310.chr10.nic@TNKS2	transcript3310.chr10.nic	protein_coding	91798456,91812983,91817134,91819270,91819482,91819939,91822296,91827017,91828285,91830923,91831103,91833853,91836919,91840561,91841283,91842172	91798889,91813207,91817229,91819306,91819557,91820033,91822362,91827203,91828406,91831014,91831181,91834024,91836998,91840706,91841448,91842749	Gene ID= ENSG00000107854.5 TPM= 2.66 Transcript Type= NA
chr10	91835594	91836776	91835594	91836776	-	transcript3312.chr10.nnic@NA	transcript3312.chr10.nnic	NA	91835594	91836776	Gene ID= novel_gene_chr10_3313 TPM= 4.25 Transcript Type= NA
chr10	91923761	91989339	91923761	91989339	+	transcript3318.chr10.nic@BTAF1	transcript3318.chr10.nic	protein_coding	91923761,91935657,91939952,91942422,91951403,91953737,91956528,91957225,91959065,91959785,91959978,91962538,91964077,91966637,91980454,91981643,91982083,91982587,91984201,91989154	91924090,91935780,91940066,91942568,91951566,91953873,91956657,91957293,91959154,91959880,91960154,91962678,91964201,91966757,91980558,91981792,91982225,91982761,91984404,91989339	Gene ID= ENSG00000095564.13 TPM= 5.31 Transcript Type= NA
chr10	91923761	91989339	91923761	91989339	+	transcript3320.chr10.nic@BTAF1	transcript3320.chr10.nic	protein_coding	91923761,91935657,91939952,91942422,91951403,91953737,91956528,91957225,91959065,91959785,91959978,91962538,91964077,91966637,91980454,91981643,91982083,91982587,91984201,91989154	91924090,91935780,91940066,91942568,91951566,91953873,91956657,91957293,91959282,91959880,91960154,91962678,91964201,91966757,91980558,91981792,91982225,91982761,91984404,91989339	Gene ID= ENSG00000095564.13 TPM= 3.19 Transcript Type= NA
chr10	92291163	92353964	92291163	92353964	+	ENST00000358935.2@MARCH5	ENST00000358935.2	protein_coding	92291163,92311135,92340673,92349349,92349671,92351091	92291529,92311337,92340803,92349532,92349837,92353964	Gene ID= ENSG00000198060.9 TPM= 7.44 Transcript Type= protein_coding
chr10	92452247	92574109	92452247	92574109	-	transcript3345.chr10.nic@IDE	transcript3345.chr10.nic	protein_coding	92573922,92537366,92534578,92531748,92514920,92510050,92508728,92508113,92507575,92506442,92504794,92490493,92487196,92483255,92478645,92475884,92474841,92470254,92468879,92465676,92463731,92461191,92456359,92455576,92452247	92574109,92537550,92534785,92531917,92515042,92510162,92508890,92508205,92507666,92506522,92504897,92490595,92487318,92483337,92478789,92475994,92474961,92470345,92468990,92465843,92464003,92461252,92456431,92455643,92454539	Gene ID= ENSG00000119912.15 TPM= 3.19 Transcript Type= NA
chr10	92689951	92695646	92689951	92695646	+	ENST00000282728.9@HHEX	ENST00000282728.9	protein_coding	92689951,92692368,92692702,92694547	92690347,92692546,92692752,92695646	Gene ID= ENSG00000152804.10 TPM= 4.25 Transcript Type= protein_coding
chr10	92848520	93059490	92848520	93059490	+	ENST00000260762.10@EXOC6	ENST00000260762.10	protein_coding	92848520,92893349,92894794,92894930,92899599,92909427,92915758,92919982,92928339,92934144,92934310,92935814,92940727,92948274,92952273,92954630,92955580,92974053,92997474,93014194,93056924,93058223	92848634,92893520,92894841,92895020,92899644,92909631,92915913,92920050,92928422,92934190,92934430,92935885,92940824,92948379,92952382,92954741,92955714,92974232,92997615,93014267,93057036,93059490	Gene ID= ENSG00000138190.16 TPM= 4.25 Transcript Type= protein_coding
chr10	93306429	93325888	93306429	93325888	-	transcript3371.chr10.nic@MYOF	transcript3371.chr10.nic	protein_coding	93323270,93323078,93319872,93316714,93313020,93310534,93310020,93306429	93325888,93323173,93320013,93316813,93313210,93310643,93310167,93307001	Gene ID= ENSG00000138119.16 TPM= 9.56 Transcript Type= NA
chr10	93397185	93482317	93397185	93482317	-	ENST00000371489.5@MYOF	ENST00000371489.5	protein_coding	93482107,93456882,93452050,93431408,93426071,93409573,93408787,93404157,93404023,93402860,93402232,93401418,93399392,93397388,93397185	93482317,93456937,93452141,93431516,93426158,93409739,93408915,93404219,93404073,93402890,93402347,93401544,93399495,93397456,93397290	Gene ID= ENSG00000138119.16 TPM= 3.19 Transcript Type= protein_coding
chr10	93669679	93702594	93669679	93702594	-	transcript3382.chr10.nnic@FRA10AC1	transcript3382.chr10.nnic	protein_coding	93702375,93700030,93698301,93698136,93694861,93692646,93687404,93685246,93684056,93681480,93676653,93670770,93669679	93702594,93700106,93698396,93698181,93694937,93692729,93687449,93685359,93684098,93681598,93676691,93670848,93669868	Gene ID= ENSG00000148690.11 TPM= 3.72 Transcript Type= NA
chr10	93681573	93702594	93681573	93702594	-	transcript3383.chr10.nic@FRA10AC1	transcript3383.chr10.nic	protein_coding	93702375,93700030,93698301,93698136,93694861,93692646,93692009,93687404,93685246,93684056,93681573	93702594,93700106,93698396,93698181,93694937,93692729,93692093,93687449,93685359,93684098,93681598	Gene ID= ENSG00000148690.11 TPM= 10.62 Transcript Type= NA
chr10	93693284	93694742	93693284	93694742	+	transcript3393.chr10.nnic@NA	transcript3393.chr10.nnic	NA	93693284	93694742	Gene ID= novel_gene_chr10_3394 TPM= 9.56 Transcript Type= NA
chr10	93893973	93902733	93893973	93902733	+	ENST00000427197.1@SLC35G1	ENST00000427197.1	protein_coding	93893973,93898571,93900752	93894211,93898751,93902733	Gene ID= ENSG00000176273.14 TPM= 1.06 Transcript Type= protein_coding
chr10	93893991	93909830	93893991	93909830	+	ENST00000483386.5@SLC35G1	ENST00000483386.5	protein_coding	93893991,93906252,93907099	93894160,93906385,93909830	Gene ID= ENSG00000176273.14 TPM= 3.19 Transcript Type= nonsense_mediated_decay
chr10	93993859	94252479	93993859	94252479	+	transcript3406.chr10.nnic@PLCE1	transcript3406.chr10.nnic	protein_coding	93993859,94030683,94132174,94171180,94227306,94234054,94235915,94245946,94252316	93994258,94032252,94132459,94171496,94227451,94234312,94236120,94246621,94252479	Gene ID= ENSG00000138193.15 TPM= 66.92 Transcript Type= NA
chr10	94264513	94281247	94264513	94281247	+	transcript3410.chr10.nic@PLCE1	transcript3410.chr10.nic	protein_coding	94264513,94265793,94268929,94270486,94273562,94279782	94265708,94265958,94269036,94270602,94273720,94281247	Gene ID= ENSG00000138193.15 TPM= 4.25 Transcript Type= NA
chr10	93993931	93996011	93993931	93996011	+	transcript3415.chr10.nnic@NA	transcript3415.chr10.nnic	NA	93993931	93996011	Gene ID= novel_gene_chr10_3416 TPM= 3.19 Transcript Type= NA
chr10	94007701	94009694	94007701	94009694	-	transcript3419.chr10.nnic@NA	transcript3419.chr10.nnic	NA	94007701	94009694	Gene ID= novel_gene_chr10_3420 TPM= 5.31 Transcript Type= NA
chr10	94041251	94045939	94041251	94045939	+	transcript3417.chr10.nnic@NA	transcript3417.chr10.nnic	NA	94041251	94045939	Gene ID= novel_gene_chr10_3418 TPM= 3.19 Transcript Type= NA
chr10	94071497	94073148	94071497	94073148	-	transcript3423.chr10.nnic@NA	transcript3423.chr10.nnic	NA	94071497	94073148	Gene ID= novel_gene_chr10_3424 TPM= 6.37 Transcript Type= NA
chr10	94210184	94213620	94210184	94213620	-	transcript3421.chr10.nnic@NA	transcript3421.chr10.nnic	NA	94210184	94213620	Gene ID= novel_gene_chr10_3422 TPM= 3.19 Transcript Type= NA
chr10	94325571	94328390	94325571	94328390	+	transcript3413.chr10.nnic@NA	transcript3413.chr10.nnic	NA	94325571	94328390	Gene ID= novel_gene_chr10_3414 TPM= 3.19 Transcript Type= NA
chr10	94346476	94362984	94346476	94362984	-	transcript3427.chr10.nic@NOC3L	transcript3427.chr10.nic	protein_coding	94362830,94361665,94358083,94357174,94356535,94354963,94352896,94352310,94350113,94349250,94346476	94362984,94361872,94358215,94357331,94356591,94355093,94353057,94352403,94350288,94349378,94346556	Gene ID= ENSG00000173145.11 TPM= 2.12 Transcript Type= NA
chr10	94333226	94362939	94333226	94362939	-	ENST00000371361.3@NOC3L	ENST00000371361.3	protein_coding	94362830,94361665,94358083,94357174,94356535,94354963,94352896,94352310,94350113,94349250,94346425,94344853,94344415,94341673,94340433,94340276,94339739,94338608,94337777,94334634,94333226	94362939,94361872,94358215,94357331,94356591,94355093,94353057,94352403,94350288,94349378,94346556,94344933,94344515,94341745,94340496,94340347,94339920,94338736,94337874,94334718,94334305	Gene ID= ENSG00000173145.11 TPM= 10.62 Transcript Type= protein_coding
chr10	94402475	94493447	94402475	94493447	+	transcript3434.chr10.nic@TBC1D12	transcript3434.chr10.nic	protein_coding	94402475,94441896,94474668,94493365	94403584,94442019,94474783,94493447	Gene ID= ENSG00000108239.8 TPM= 3.19 Transcript Type= NA
chr10	95237572	95291024	95237572	95291024	-	ENST00000329399.6@PDLIM1	ENST00000329399.6	protein_coding	95290820,95271633,95268778,95263864,95247215,95238568,95237572	95291024,95271784,95268862,95264063,95247366,95238685,95238111	Gene ID= ENSG00000107438.8 TPM= 635.17 Transcript Type= protein_coding
chr10	95392560	95408578	95392560	95408578	-	transcript3459.chr10.nic@SORBS1	transcript3459.chr10.nic	protein_coding	95406118,95399017,95392560	95408578,95399189,95397283	Gene ID= ENSG00000095637.21 TPM= 13.46 Transcript Type= NA
chr10	95311771	95561378	95311771	95561378	-	ENST00000371227.8@SORBS1	ENST00000371227.8	protein_coding	95561320,95491035,95441126,95437490,95434622,95432448,95422190,95421961,95414494,95410633,95406118,95399017,95397220,95384238,95383985,95381685,95375973,95371984,95371326,95367650,95357631,95354882,95351209,95346406,95341564,95341285,95339133,95336521,95322746,95321963,95318320,95311771	95561378,95491120,95441180,95437555,95434717,95432576,95422216,95422073,95414862,95410777,95406147,95399189,95397283,95384285,95384114,95381799,95376056,95372049,95371427,95367699,95357803,95354967,95351376,95346452,95341678,95341410,95339327,95337294,95322805,95322021,95318432,95315126	Gene ID= ENSG00000095637.21 TPM= 293.16 Transcript Type= protein_coding
chr10	95330499	95333361	95330499	95333361	-	transcript3493.chr10.nnic@NA	transcript3493.chr10.nnic	NA	95330499	95333361	Gene ID= novel_gene_chr10_3494 TPM= 2.12 Transcript Type= NA
chr10	95332611	95337080	95332611	95337080	-	transcript3487.chr10.nnic@NA	transcript3487.chr10.nnic	NA	95332611	95337080	Gene ID= novel_gene_chr10_3488 TPM= 2.12 Transcript Type= NA
chr10	95353679	95356238	95353679	95356238	-	transcript3495.chr10.nnic@NA	transcript3495.chr10.nnic	NA	95353679	95356238	Gene ID= novel_gene_chr10_3496 TPM= 2.12 Transcript Type= NA
chr10	95361614	95364040	95361614	95364040	-	transcript3489.chr10.nnic@NA	transcript3489.chr10.nnic	NA	95361614	95364040	Gene ID= novel_gene_chr10_3490 TPM= 3.19 Transcript Type= NA
chr10	95366688	95369869	95366688	95369869	-	transcript3481.chr10.nnic@NA	transcript3481.chr10.nnic	NA	95366688	95369869	Gene ID= novel_gene_chr10_3482 TPM= 3.19 Transcript Type= NA
chr10	95387982	95389525	95387982	95389525	+	transcript3475.chr10.nnic@NA	transcript3475.chr10.nnic	NA	95387982	95389525	Gene ID= novel_gene_chr10_3476 TPM= 3.19 Transcript Type= NA
chr10	95387983	95391522	95387983	95391522	-	transcript3479.chr10.nnic@NA	transcript3479.chr10.nnic	NA	95387983	95391522	Gene ID= novel_gene_chr10_3480 TPM= 16.99 Transcript Type= NA
chr10	95396693	95400866	95396693	95400866	+	transcript3465.chr10.nnic@NA	transcript3465.chr10.nnic	NA	95396693	95400866	Gene ID= novel_gene_chr10_3466 TPM= 5.31 Transcript Type= NA
chr10	95402784	95407665	95402784	95407665	-	transcript3491.chr10.nnic@NA	transcript3491.chr10.nnic	NA	95402784	95407665	Gene ID= novel_gene_chr10_3492 TPM= 3.19 Transcript Type= NA
chr10	95425177	95428430	95425177	95428430	+	transcript3469.chr10.nnic@NA	transcript3469.chr10.nnic	NA	95425177	95428430	Gene ID= novel_gene_chr10_3470 TPM= 8.5 Transcript Type= NA
chr10	95477502	95479420	95477502	95479420	+	transcript3471.chr10.nnic@NA	transcript3471.chr10.nnic	NA	95477502	95479420	Gene ID= novel_gene_chr10_3472 TPM= 18.06 Transcript Type= NA
chr10	95509943	95512438	95509943	95512438	+	transcript3467.chr10.nnic@NA	transcript3467.chr10.nnic	NA	95509943	95512438	Gene ID= novel_gene_chr10_3468 TPM= 25.49 Transcript Type= NA
chr10	95525898	95528946	95525898	95528946	+	transcript3473.chr10.nnic@NA	transcript3473.chr10.nnic	NA	95525898	95528946	Gene ID= novel_gene_chr10_3474 TPM= 16.99 Transcript Type= NA
chr10	95552988	95554151	95552988	95554151	+	transcript3477.chr10.nnic@NA	transcript3477.chr10.nnic	NA	95552988	95554151	Gene ID= novel_gene_chr10_3478 TPM= 2.12 Transcript Type= NA
chr10	95605945	95656668	95605945	95656668	-	transcript3498.chr10.nic@ALDH18A1	transcript3498.chr10.nic	protein_coding	95656446,95653290,95642992,95637287,95637093,95633491,95632959,95628368,95627442,95626703,95625362,95621031,95616477,95613966,95613742,95611256,95610197,95605945	95656668,95653405,95643206,95637436,95637197,95633649,95633049,95628492,95627586,95626776,95625455,95621251,95616614,95614161,95613863,95611442,95610292,95606943	Gene ID= ENSG00000059573.8 TPM= 10.62 Transcript Type= NA
chr10	95663879	95693842	95663879	95693842	-	transcript3502.chr10.nnic@TCTN3	transcript3502.chr10.nnic	protein_coding	95693644,95693353,95692920,95687592,95687247,95687044,95686495,95685556,95684499,95683522,95683101,95682651,95680472,95663879	95693842,95693476,95693038,95687719,95687355,95687159,95686530,95685636,95684624,95683629,95683180,95682804,95680609,95664300	Gene ID= ENSG00000119977.20 TPM= 3.19 Transcript Type= NA
chr10	95904693	95905837	95904693	95905837	+	transcript3514.chr10.nnic@NA	transcript3514.chr10.nnic	NA	95904693	95905837	Gene ID= novel_gene_chr10_3515 TPM= 3.19 Transcript Type= NA
chr10	96043394	96060870	96043394	96060870	+	ENST00000265992.9@CCNJ	ENST00000265992.9	protein_coding	96043394,96044353,96050256,96056701,96057121,96057830	96043719,96044462,96050466,96057000,96057247,96060870	Gene ID= ENSG00000107443.15 TPM= 5.31 Transcript Type= protein_coding
chr10	96364606	96513911	96364606	96513911	-	ENST00000357947.3@TLL2	ENST00000357947.3	protein_coding	96513511,96480349,96446091,96432807,96428631,96422549,96420956,96413192,96410359,96405232,96397186,96395875,96395187,96386953,96386055,96384587,96378967,96376692,96373596,96370065,96364606	96513911,96480459,96446168,96432962,96428748,96422727,96421061,96413316,96410474,96405334,96397302,96396020,96395382,96387078,96386215,96384767,96379092,96376819,96373809,96370315,96368222	Gene ID= ENSG00000095587.8 TPM= 2.12 Transcript Type= protein_coding
chr10	96518109	96587052	96518109	96587052	-	ENST00000371142.8@TM9SF3	ENST00000371142.8	protein_coding	96586734,96576634,96565304,96561978,96559659,96552928,96551245,96547895,96544076,96533051,96530540,96528031,96527413,96527213,96518109	96587052,96576829,96565426,96562138,96559736,96553059,96551411,96547989,96544206,96533190,96530608,96528177,96527496,96527289,96522330	Gene ID= ENSG00000077147.14 TPM= 21.24 Transcript Type= protein_coding
chr10	96750288	96750899	96750288	96750899	+	ENST00000439189.1@RPL13AP5	ENST00000439189.1	processed_pseudogene	96750288	96750899	Gene ID= ENSG00000236552.2 TPM= 95.59 Transcript Type= processed_pseudogene
chr10	96830632	96832237	96830632	96832237	-	transcript3543.chr10.nnic@NA	transcript3543.chr10.nnic	NA	96830632	96832237	Gene ID= novel_gene_chr10_3544 TPM= 11.68 Transcript Type= NA
chr10	97222176	97292673	97222176	97292673	-	ENST00000358308.7@ARHGAP19	ENST00000358308.7	protein_coding	97292572,97265860,97264826,97263420,97259402,97246272,97243968,97235217,97229764,97229147,97222176	97292673,97266125,97264906,97263629,97259628,97246337,97244159,97235315,97229874,97229225,97226132	Gene ID= ENSG00000213390.10 TPM= 1.06 Transcript Type= protein_coding
chr10	97222173	97292656	97222173	97292656	-	ENST00000358531.8@ARHGAP19	ENST00000358531.8	protein_coding	97292572,97265860,97264826,97263420,97259402,97256318,97246272,97243968,97235217,97229764,97229147,97222173	97292656,97266125,97264906,97263629,97259628,97256404,97246337,97244159,97235315,97229874,97229225,97226132	Gene ID= ENSG00000213390.10 TPM= 1.06 Transcript Type= protein_coding
chr10	97319272	97321822	97319272	97321822	+	transcript3558.chr10.nnic@NA	transcript3558.chr10.nnic	NA	97319272	97321822	Gene ID= novel_gene_chr10_3559 TPM= 7.44 Transcript Type= NA
chr10	97332497	97334709	97332497	97334709	-	ENST00000371019.3@FRAT2	ENST00000371019.3	protein_coding	97332497	97334709	Gene ID= ENSG00000181274.6 TPM= 23.37 Transcript Type= protein_coding
chr10	97356701	97426074	97356701	97426074	-	ENST00000536831.5@RRP12	ENST00000536831.5	protein_coding	97426023,97401093,97400305,97396218,97393684,97390739,97390423,97388489,97388252,97385895,97385166,97381715,97381386,97380799,97379628,97379293,97373830,97373575,97373046,97372736,97372073,97370923,97370716,97370455,97370167,97369425,97367041,97366742,97366446,97366108,97363854,97360546,97358943,97358537,97356701	97426074,97401368,97400534,97396301,97393760,97390844,97390539,97388624,97388379,97385993,97385257,97381826,97381483,97380913,97379770,97379414,97373894,97373737,97373200,97372803,97372166,97371081,97370796,97370560,97370274,97369582,97367132,97366909,97366621,97366233,97363903,97360618,97359010,97358619,97357196	Gene ID= ENSG00000052749.13 TPM= 65.85 Transcript Type= protein_coding
chr10	97426160	97433441	97426160	97433441	+	ENST00000334828.5@PGAM1	ENST00000334828.5	protein_coding	97426160,97430379,97430955,97432355	97426446,97430653,97431135,97433441	Gene ID= ENSG00000171314.8 TPM= 859.29 Transcript Type= protein_coding
chr10	97436142	97446017	97436142	97446017	-	ENST00000370902.7@EXOSC1	ENST00000370902.7	protein_coding	97445955,97445732,97443237,97441171,97438670,97437700,97437191,97436142	97446017,97445847,97443311,97441259,97438703,97437750,97437275,97436551	Gene ID= ENSG00000171311.12 TPM= 2.12 Transcript Type= protein_coding
chr10	97436248	97445993	97436248	97445993	-	ENST00000370885.8@EXOSC1	ENST00000370885.8	protein_coding	97445955,97445732,97441171,97438670,97437700,97437191,97436248	97445993,97445847,97441259,97438703,97437750,97437275,97436551	Gene ID= ENSG00000171311.12 TPM= 3.19 Transcript Type= protein_coding
chr10	97446131	97457363	97446131	97457363	+	ENST00000393760.5@ZDHHC16	ENST00000393760.5	protein_coding	97446131,97450357,97451671,97452090,97452415,97452895,97453530,97453799,97454714,97455660,97455974,97456777	97446353,97450536,97451918,97452284,97452503,97452923,97453663,97453846,97454799,97455783,97456044,97457363	Gene ID= ENSG00000171307.18 TPM= 5.74 Transcript Type= protein_coding
chr10	97446167	97457366	97446167	97457366	+	transcript3578.chr10.nic@ZDHHC16	transcript3578.chr10.nic	protein_coding	97446167,97450357,97451671,97452090,97452415,97453618,97453799,97454714,97455660,97455974,97456777	97446353,97450536,97451918,97452284,97452503,97453663,97453846,97454799,97455783,97456044,97457366	Gene ID= ENSG00000171307.18 TPM= 2.81 Transcript Type= NA
chr10	97446202	97457366	97446202	97457366	+	ENST00000352634.8@ZDHHC16	ENST00000352634.8	protein_coding	97446202,97451671,97452090,97452415,97452895,97453530,97454714,97455660,97455974,97456777	97446353,97451918,97452284,97452503,97452923,97453663,97454799,97455783,97456044,97457366	Gene ID= ENSG00000171307.18 TPM= 10.25 Transcript Type= protein_coding
chr10	97446170	97457366	97446170	97457366	+	ENST00000370854.7@ZDHHC16	ENST00000370854.7	protein_coding	97446170,97451671,97452090,97452415,97452895,97453530,97453799,97454714,97455660,97455974,97456777	97446353,97451918,97452284,97452503,97452923,97453663,97453846,97454799,97455783,97456044,97457366	Gene ID= ENSG00000171307.18 TPM= 42.11 Transcript Type= protein_coding
chr10	97446204	97457366	97446204	97457366	+	ENST00000353979.7@ZDHHC16	ENST00000353979.7	protein_coding	97446204,97451671,97452090,97452415,97453618,97453799,97454714,97455660,97455974,97456777	97446353,97451918,97452284,97452503,97453663,97453846,97454799,97455783,97456044,97457366	Gene ID= ENSG00000171307.18 TPM= 19.81 Transcript Type= protein_coding
chr10	97446165	97447936	97446165	97447936	+	transcript3605.chr10.nnic@NA	transcript3605.chr10.nnic	NA	97446165	97447936	Gene ID= novel_gene_chr10_3606 TPM= 4.25 Transcript Type= NA
chr10	97458324	97498432	97458324	97498432	-	transcript3567.chr10.nic@MMS19	transcript3567.chr10.nic	protein_coding	97498273,97484103,97480942,97480241,97478304,97477855,97477347,97476835,97476683,97470775,97470129,97469646,97468966,97468252,97467505,97466776,97466504,97466059,97465805,97463858,97462583,97462017,97461828,97461496,97460907,97460695,97460046,97459659,97459362,97459223,97458800,97458324	97498432,97484151,97481042,97480357,97478389,97477929,97477416,97476963,97476744,97470861,97470203,97469723,97469104,97468406,97467583,97466901,97466585,97466159,97465954,97464013,97462682,97462119,97461896,97461622,97461007,97460751,97460232,97459741,97459526,97459282,97458900,97458719	Gene ID= ENSG00000155229.20 TPM= 5.49 Transcript Type= NA
chr10	97458324	97498720	97458324	97498720	-	ENST00000438925.6@MMS19	ENST00000438925.6	protein_coding	97498273,97484103,97480942,97478304,97477855,97477347,97476835,97476683,97470775,97470129,97469646,97468966,97468252,97467505,97466776,97466504,97466059,97465805,97463858,97462583,97462017,97461828,97461496,97460907,97460695,97460046,97459659,97459362,97459223,97458800,97458324	97498720,97484151,97481042,97478389,97477929,97477416,97476963,97476744,97470861,97470203,97469723,97469104,97468406,97467583,97466901,97466585,97466159,97465954,97464013,97462682,97462119,97461896,97461622,97461007,97460751,97460232,97459741,97459526,97459282,97458900,97458719	Gene ID= ENSG00000155229.20 TPM= 16.11 Transcript Type= protein_coding
chr10	97458326	97498609	97458326	97498609	-	ENST00000355839.10@MMS19	ENST00000355839.10	protein_coding	97498273,97484103,97480942,97478304,97477855,97477347,97476683,97470775,97470129,97469646,97468966,97468252,97467505,97466776,97466504,97466059,97465805,97463858,97462583,97462017,97461828,97461496,97460907,97460695,97460046,97459659,97459362,97459223,97458800,97458326	97498609,97484151,97481042,97478389,97477929,97477416,97476744,97470861,97470203,97469723,97469104,97468406,97467583,97466901,97466585,97466159,97465954,97464013,97462682,97462119,97461896,97461622,97461007,97460751,97460232,97459741,97459526,97459282,97458900,97458719	Gene ID= ENSG00000155229.20 TPM= 3.37 Transcript Type= protein_coding
chr10	97458324	97498388	97458324	97498388	-	ENST00000415383.5@MMS19	ENST00000415383.5	protein_coding	97498273,97480942,97478304,97477855,97477347,97476835,97476683,97470775,97470129,97469646,97468966,97468252,97467505,97466776,97466504,97466059,97465805,97463858,97462583,97462017,97461828,97461496,97460907,97460695,97460046,97459659,97459362,97459223,97458800,97458324	97498388,97481042,97478389,97477929,97477404,97476963,97476744,97470861,97470203,97469723,97469104,97468406,97467583,97466901,97466585,97466156,97465954,97464013,97462682,97462119,97461896,97461622,97461007,97460751,97460232,97459741,97459526,97459282,97458900,97458719	Gene ID= ENSG00000155229.20 TPM= 5.84 Transcript Type= nonsense_mediated_decay
chr10	97498868	97571209	97498868	97571209	+	ENST00000370664.3@UBTD1	ENST00000370664.3	protein_coding	97498868,97567914,97570138	97499273,97568141,97571209	Gene ID= ENSG00000165886.4 TPM= 71.16 Transcript Type= protein_coding
chr10	97544016	97545189	97544016	97545189	+	transcript3610.chr10.nnic@NA	transcript3610.chr10.nnic	NA	97544016	97545189	Gene ID= novel_gene_chr10_3611 TPM= 2.12 Transcript Type= NA
chr10	97572494	97578888	97572494	97578888	+	transcript3616.chr10.nic@ANKRD2	transcript3616.chr10.nic	protein_coding	97572494,97577800,97578240,97578498	97572875,97577901,97578398,97578888	Gene ID= ENSG00000165887.11 TPM= 8.5 Transcript Type= NA
chr10	97572499	97583884	97572499	97583884	+	ENST00000370655.5@ANKRD2	ENST00000370655.5	protein_coding	97572499,97577800,97578240,97578498,97580855,97581316,97582315,97582604,97583576	97572875,97577901,97578398,97578605,97580953,97581414,97582413,97582702,97583884	Gene ID= ENSG00000165887.11 TPM= 117.9 Transcript Type= protein_coding
chr10	97584333	97602240	97584333	97602240	+	transcript3617.chr10.nic@HOGA1	transcript3617.chr10.nic	protein_coding	97584333,97598775,97599089,97599680,97600067,97601857,97602101	97584914,97598903,97599216,97599814,97600163,97601990,97602240	Gene ID= ENSG00000241935.8 TPM= 2.12 Transcript Type= NA
chr10	97584333	97602225	97584333	97602225	+	transcript3620.chr10.nic@HOGA1	transcript3620.chr10.nic	protein_coding	97584333,97598775,97599089,97599680,97600067,97601857	97584914,97598903,97599216,97599814,97600163,97602225	Gene ID= ENSG00000241935.8 TPM= 2.12 Transcript Type= NA
chr10	97584333	97612802	97584333	97612802	+	transcript3623.chr10.nic@HOGA1	transcript3623.chr10.nic	protein_coding	97584333,97598775,97599089,97600067,97601857,97611510	97584914,97598903,97599814,97600163,97601990,97612802	Gene ID= ENSG00000241935.8 TPM= 5.31 Transcript Type= NA
chr10	97584343	97612802	97584343	97612802	+	ENST00000370647.8@HOGA1	ENST00000370647.8	protein_coding	97584343,97601857,97611510	97584914,97601990,97612802	Gene ID= ENSG00000241935.8 TPM= 9.56 Transcript Type= protein_coding
chr10	97584343	97612802	97584343	97612802	+	ENST00000370646.8@HOGA1	ENST00000370646.8	protein_coding	97584343,97598775,97599089,97599680,97600067,97601857,97611510	97584914,97598903,97599216,97599814,97600163,97601990,97612802	Gene ID= ENSG00000241935.8 TPM= 16.99 Transcript Type= protein_coding
chr10	97614553	97633480	97614553	97633480	-	ENST00000307450.10@MORN4	ENST00000307450.10	protein_coding	97633347,97619587,97617208,97616678,97614553	97633480,97619683,97617322,97616787,97616411	Gene ID= ENSG00000171160.17 TPM= 36.11 Transcript Type= protein_coding
chr10	97619410	97633491	97619410	97633491	-	ENST00000370635.3@MORN4	ENST00000370635.3	protein_coding	97633347,97619410	97633491,97619683	Gene ID= ENSG00000171160.17 TPM= 12.75 Transcript Type= protein_coding
chr10	97640686	97676434	97640686	97676434	+	ENST00000370631.3@PI4K2A	ENST00000370631.3	protein_coding	97640686,97650941,97656285,97656821,97662907,97664885,97666438,97667061,97673581	97641177,97651141,97656416,97656974,97662968,97664984,97666571,97667120,97676434	Gene ID= ENSG00000155252.13 TPM= 9.56 Transcript Type= protein_coding
chr10	97677424	97687323	97677424	97687323	-	ENST00000370626.3@AVPI1	ENST00000370626.3	protein_coding	97686766,97679619,97677424	97687323,97679915,97678025	Gene ID= ENSG00000119986.6 TPM= 22.31 Transcript Type= protein_coding
chr10	97713724	97718152	97713724	97718152	+	ENST00000285605.7@MARVELD1	ENST00000285605.7	protein_coding	97713724,97717194	97715985,97718152	Gene ID= ENSG00000155254.12 TPM= 13.81 Transcript Type= protein_coding
chr10	97737123	97760895	97737123	97760895	+	transcript3640.chr10.nic@ZFYVE27	transcript3640.chr10.nic	protein_coding	97737123,97738477,97743094,97744729,97748269,97749474,97750331,97751376,97753038,97757265,97757642,97759236	97737321,97738674,97743164,97744915,97748364,97749586,97750470,97751462,97753182,97757311,97757723,97760895	Gene ID= ENSG00000155256.17 TPM= 9.82 Transcript Type= NA
chr10	97737121	97760906	97737121	97760906	+	ENST00000337540.11@ZFYVE27	ENST00000337540.11	protein_coding	97737121,97738477,97744729,97748269,97749474,97750331,97751391,97753038,97757265,97757642,97759236	97737321,97738649,97744915,97748364,97749586,97750470,97751462,97753182,97757311,97757723,97760906	Gene ID= ENSG00000155256.17 TPM= 3.98 Transcript Type= protein_coding
chr10	97737128	97760895	97737128	97760895	+	ENST00000423811.3@ZFYVE27	ENST00000423811.3	protein_coding	97737128,97738477,97743094,97744729,97748269,97749474,97750331,97751376,97752857,97753038,97757265,97757642,97759236	97737325,97738674,97743164,97744915,97748364,97749586,97750470,97751462,97752877,97753182,97757311,97757723,97760895	Gene ID= ENSG00000155256.17 TPM= 7.7 Transcript Type= protein_coding
chr10	97737140	97760895	97737140	97760895	+	ENST00000359980.5@ZFYVE27	ENST00000359980.5	protein_coding	97737140,97738477,97743094,97744729,97748269,97749474,97750331,97751391,97753038,97757265,97757642,97759236	97737325,97738674,97743164,97744915,97748364,97749586,97750470,97751462,97753182,97757311,97757723,97760895	Gene ID= ENSG00000155256.17 TPM= 19.92 Transcript Type= protein_coding
chr10	97754315	97756664	97754315	97756664	-	transcript3647.chr10.nnic@NA	transcript3647.chr10.nnic	NA	97754315	97756664	Gene ID= novel_gene_chr10_3648 TPM= 3.19 Transcript Type= NA
chr10	97766751	97771952	97766751	97771952	-	ENST00000266066.3@SFRP5	ENST00000266066.3	protein_coding	97771305,97769668,97766751	97771952,97769745,97767860	Gene ID= ENSG00000120057.4 TPM= 6.37 Transcript Type= protein_coding
chr10	97879629	98030828	97879629	98030828	-	ENST00000370591.6@CRTAC1	ENST00000370591.6	protein_coding	98030449,98011138,97936170,97923264,97917500,97908013,97904669,97901503,97896909,97895885,97895245,97884206,97882786,97880249,97879629	98030828,98011337,97936366,97923400,97917656,97908147,97904814,97901639,97896991,97895985,97895413,97884351,97882828,97880392,97879801	Gene ID= ENSG00000095713.13 TPM= 13.81 Transcript Type= protein_coding
chr10	98247690	98268194	98247690	98268194	-	transcript3655.chr10.nnic@LOXL4	transcript3655.chr10.nnic	protein_coding	98268132,98267631,98262743,98262035,98260922,98259391,98259009,98257981,98257650,98256780,98255577,98253553,98252353,98251566,98251065,98247690	98268194,98267822,98263051,98262213,98261127,98259429,98259228,98258164,98257804,98256947,98255739,98253796,98252468,98251702,98251176,98248991	Gene ID= ENSG00000138131.3 TPM= 9.03 Transcript Type= NA
chr10	98247690	98268250	98247690	98268250	-	ENST00000260702.3@LOXL4	ENST00000260702.3	protein_coding	98268132,98262743,98262035,98260922,98259391,98259009,98257981,98257650,98256780,98255577,98253553,98252353,98251566,98251065,98247690	98268250,98263051,98262213,98261127,98259429,98259228,98258164,98257804,98256947,98255739,98253796,98252468,98251702,98251176,98248991	Gene ID= ENSG00000138131.3 TPM= 23.9 Transcript Type= protein_coding
chr10	98383565	98415184	98383565	98415184	-	ENST00000370575.4@PYROXD2	ENST00000370575.4	protein_coding	98415009,98410939,98407904,98407582,98400102,98397345,98395391,98395196,98392942,98392432,98391010,98390598,98388354,98387201,98384947,98383565	98415184,98410958,98407997,98407655,98400257,98397498,98395452,98395293,98393083,98392566,98391082,98390754,98388508,98387307,98385067,98383868	Gene ID= ENSG00000119943.12 TPM= 5.31 Transcript Type= protein_coding
chr10	98417015	98446914	98417015	98446914	-	transcript3675.chr10.nic@HPS1	transcript3675.chr10.nic	protein_coding	98446807,98445300,98443124,98435635,98435272,98433983,98431131,98430571,98429573,98427215,98425818,98425541,98424313,98423753,98423603,98422369,98420045,98418175,98417015	98446914,98445413,98443240,98435772,98435414,98434091,98431291,98430670,98429642,98427264,98425985,98425720,98424374,98423887,98423668,98422513,98420158,98418257,98417726	Gene ID= ENSG00000107521.18 TPM= 5.84 Transcript Type= NA
chr10	98417015	98446887	98417015	98446887	-	ENST00000467246.5@HPS1	ENST00000467246.5	protein_coding	98446807,98445300,98443124,98435635,98435272,98433940,98431131,98430571,98429573,98427215,98425818,98425541,98424313,98423753,98423603,98422369,98420045,98418175,98417015	98446887,98445413,98443240,98435772,98435414,98434091,98431291,98430670,98429642,98427264,98425985,98425720,98424374,98423887,98423668,98422513,98420158,98418257,98417726	Gene ID= ENSG00000107521.18 TPM= 21.77 Transcript Type= processed_transcript
chr10	98431567	98433247	98431567	98433247	+	transcript3693.chr10.nnic@NA	transcript3693.chr10.nnic	NA	98431567	98433247	Gene ID= novel_gene_chr10_3694 TPM= 2.12 Transcript Type= NA
chr10	99396870	99430593	99396870	99430593	-	ENST00000370508.5@GOT1	ENST00000370508.5	protein_coding	99430448,99420624,99406726,99406137,99405756,99403724,99403469,99402580,99396870	99430593,99420805,99406849,99406249,99405860,99403874,99403634,99402722,99397686	Gene ID= ENSG00000120053.10 TPM= 454.6 Transcript Type= protein_coding
chr10	99610522	99620487	99610522	99620487	-	transcript3722.chr10.nnic@SLC25A28	transcript3722.chr10.nnic	protein_coding	99620045,99613733,99612543,99610522	99620487,99613924,99612599,99611366	Gene ID= ENSG00000155287.10 TPM= 6.37 Transcript Type= NA
chr10	99610522	99620487	99610522	99620487	-	transcript3725.chr10.nic@SLC25A28	transcript3725.chr10.nic	protein_coding	99620045,99612543,99610522	99620487,99613924,99611366	Gene ID= ENSG00000155287.10 TPM= 8.5 Transcript Type= NA
chr10	99610522	99620364	99610522	99620364	-	ENST00000370495.5@SLC25A28	ENST00000370495.5	protein_coding	99620045,99613696,99612543,99610522	99620364,99613924,99612599,99611366	Gene ID= ENSG00000155287.10 TPM= 9.56 Transcript Type= protein_coding
chr10	99618596	99620439	99618596	99620439	-	transcript3729.chr10.nnic@NA	transcript3729.chr10.nnic	NA	99618596	99620439	Gene ID= novel_gene_chr10_3730 TPM= 2.12 Transcript Type= NA
chr10	99732205	99756134	99732205	99756134	+	transcript3734.chr10.nnic@CUTC	transcript3734.chr10.nnic	protein_coding	99732205,99736246,99739710,99743153,99744037,99747257,99750369,99754529,99755625	99732356,99736317,99739769,99743362,99744072,99747390,99750396,99754634,99756134	Gene ID= ENSG00000119929.12 TPM= 5.31 Transcript Type= NA
chr10	99732220	99756134	99732220	99756134	+	ENST00000370476.9@CUTC	ENST00000370476.9	protein_coding	99732220,99736246,99739710,99743153,99744037,99747257,99750369,99754529,99755625	99732409,99736317,99739769,99743362,99744072,99747390,99750396,99754634,99756134	Gene ID= ENSG00000119929.12 TPM= 59.48 Transcript Type= protein_coding
chr10	99711844	99732100	99711844	99732100	-	ENST00000370483.9@COX15	ENST00000370483.9	protein_coding	99731960,99729553,99727441,99726968,99723956,99720987,99718346,99716348,99711844	99732100,99729734,99727563,99727154,99724123,99721068,99718500,99716461,99713479	Gene ID= ENSG00000014919.12 TPM= 4.25 Transcript Type= protein_coding
chr10	99713515	99732100	99713515	99732100	-	ENST00000016171.5@COX15	ENST00000016171.5	protein_coding	99731960,99729553,99727441,99726968,99723956,99720987,99718346,99716348,99713515	99732100,99729734,99727563,99727154,99724123,99721068,99718500,99716461,99714718	Gene ID= ENSG00000014919.12 TPM= 11.68 Transcript Type= protein_coding
chr10	100150094	100186057	100150094	100186057	-	transcript3753.chr10.nnic@ERLIN1	transcript3753.chr10.nnic	protein_coding	100185962,100185514,100183756,100156145,100154860,100150094	100186057,100185637,100183837,100156234,100154939,100152352	Gene ID= ENSG00000107566.13 TPM= 3.19 Transcript Type= NA
chr10	100151808	100186033	100151808	100186033	-	ENST00000407654.7@ERLIN1	ENST00000407654.7	protein_coding	100185962,100185514,100183756,100179201,100178133,100175945,100174208,100167348,100164004,100156145,100154860,100151808	100186033,100185637,100183837,100179247,100178194,100176070,100174281,100167406,100164095,100156234,100154939,100152352	Gene ID= ENSG00000107566.13 TPM= 1.06 Transcript Type= protein_coding
chr10	100188298	100229619	100188298	100229619	-	ENST00000370397.7@CHUK	ENST00000370397.7	protein_coding	100229428,100225923,100222866,100222112,100220588,100219270,100219008,100218718,100217995,100209595,100207230,100205076,100204506,100202088,100200671,100199971,100194425,100193984,100193298,100190869,100188298	100229619,100226017,100222980,100222181,100220676,100219359,100219132,100218825,100218130,100209789,100207332,100205199,100204657,100202149,100200780,100200020,100194521,100194131,100193431,100190968,100189627	Gene ID= ENSG00000213341.10 TPM= 16.99 Transcript Type= protein_coding
chr10	100207639	100208794	100207639	100208794	+	transcript3761.chr10.nnic@NA	transcript3761.chr10.nnic	NA	100207639	100208794	Gene ID= novel_gene_chr10_3762 TPM= 2.12 Transcript Type= NA
chr10	100232298	100267673	100232298	100267673	-	transcript3764.chr10.nnic@CWF19L1	transcript3764.chr10.nnic	protein_coding	100267571,100261979,100260966,100260218,100256262,100253421,100250248,100246795,100245799,100243698,100238022,100236850,100235667,100233047,100232298	100267673,100262063,100261044,100260319,100256476,100253539,100250332,100246935,100245913,100243777,100238231,100236969,100235764,100233371,100232543	Gene ID= ENSG00000095485.17 TPM= 2.66 Transcript Type= NA
chr10	100232298	100267680	100232298	100267680	-	ENST00000468709.5@CWF19L1	ENST00000468709.5	protein_coding	100267571,100261979,100260966,100260218,100253421,100250248,100246795,100245799,100243698,100238022,100236850,100235667,100232298	100267680,100262063,100261028,100260319,100253539,100250332,100246935,100245913,100243777,100238231,100236969,100235764,100233371	Gene ID= ENSG00000095485.17 TPM= 3.72 Transcript Type= nonsense_mediated_decay
chr10	100274695	100286712	100274695	100286712	-	ENST00000370372.6@BLOC1S2	ENST00000370372.6	protein_coding	100286605,100286097,100280934,100280124,100274695	100286712,100286213,100281053,100280228,100275493	Gene ID= ENSG00000196072.11 TPM= 37.18 Transcript Type= protein_coding
chr10	100347124	100364834	100347124	100364834	+	ENST00000370355.2@SCD	ENST00000370355.2	protein_coding	100347124,100348064,100352366,100354427,100356532,100360734	100347531,100348346,100352496,100354632,100356764,100364834	Gene ID= ENSG00000099194.5 TPM= 6.37 Transcript Type= protein_coding
chr10	100523743	100530000	100523743	100530000	-	ENST00000370322.5@NDUFB8	ENST00000370322.5	protein_coding	100529858,100529380,100526975,100526399,100523743	100530000,100529506,100527074,100526554,100523929	Gene ID= ENSG00000166136.15 TPM= 16.99 Transcript Type= protein_coding
chr10	100523740	100529864	100523740	100529864	-	ENST00000299166.8@NDUFB8	ENST00000299166.8	protein_coding	100529767,100529380,100526975,100526399,100523740	100529864,100529506,100527074,100526554,100523929	Gene ID= ENSG00000166136.15 TPM= 400.43 Transcript Type= protein_coding
chr10	100523740	100526598	100523740	100526598	-	ENST00000464651.1@NDUFB8	ENST00000464651.1	protein_coding	100526399,100523740	100526598,100523929	Gene ID= ENSG00000166136.15 TPM= 37.18 Transcript Type= retained_intron
chr10	100535859	100559998	100535859	100559998	+	ENST00000299163.6@HIF1AN	ENST00000299163.6	protein_coding	100535859,100536411,100540634,100544951,100545943,100546518,100547140,100548093	100536135,100536661,100540782,100545096,100546049,100546581,100547250,100559998	Gene ID= ENSG00000166135.13 TPM= 14.16 Transcript Type= protein_coding
chr10	100535941	100550001	100535941	100550001	+	transcript3795.chr10.nic@HIF1AN	transcript3795.chr10.nic	protein_coding	100535941,100536411,100540634,100544951,100545943,100546518,100547140,100548093	100536050,100536661,100540782,100545096,100546049,100546581,100547250,100550001	Gene ID= ENSG00000166135.13 TPM= 10.44 Transcript Type= NA
chr10	100912569	100965136	100912569	100965136	+	ENST00000238961.8@SLF2	ENST00000238961.8	protein_coding	100912569,100915999,100916570,100918384,100923975,100925949,100929317,100929830,100930976,100937402,100938595,100944026,100945330,100947039,100947760,100950076,100950676,100956451,100959428,100961877	100913250,100916042,100917300,100918441,100924972,100926019,100929439,100929997,100931078,100937477,100938736,100944128,100945506,100947136,100947847,100950207,100950753,100956537,100959496,100965136	Gene ID= ENSG00000119906.11 TPM= 7.44 Transcript Type= protein_coding
chr10	100912963	100926760	100912963	100926760	+	ENST00000370271.7@SLF2	ENST00000370271.7	protein_coding	100912963,100915999,100916570,100918384,100923975,100925949	100913250,100916042,100917300,100918441,100924972,100926760	Gene ID= ENSG00000119906.11 TPM= 3.19 Transcript Type= protein_coding
chr10	100912996	100913886	100912996	100913886	+	ENST00000609386.1@SLF2	ENST00000609386.1	protein_coding	100912996	100913886	Gene ID= ENSG00000119906.11 TPM= 5.31 Transcript Type= protein_coding
chr10	100968125	100969480	100968125	100969480	-	transcript3807.chr10.nnic@NA	transcript3807.chr10.nnic	NA	100968125	100969480	Gene ID= novel_gene_chr10_3808 TPM= 5.31 Transcript Type= NA
chr10	100981376	100987513	100981376	100987513	-	transcript3818.chr10.nnic@MRPL43	transcript3818.chr10.nnic	protein_coding	100987313,100983755,100981376	100987513,100983817,100981543	Gene ID= ENSG00000055950.16 TPM= 3.19 Transcript Type= NA
chr10	100986276	100987286	100986276	100987286	-	ENST00000493646.1@MRPL43	ENST00000493646.1	protein_coding	100987090,100986276	100987286,100986975	Gene ID= ENSG00000055950.16 TPM= 5.49 Transcript Type= processed_transcript
chr10	100977821	100987497	100977821	100987497	-	ENST00000318325.6@MRPL43	ENST00000318325.6	protein_coding	100987313,100987090,100986749,100983755,100977821	100987497,100987196,100986975,100983817,100979372	Gene ID= ENSG00000055950.16 TPM= 1.06 Transcript Type= protein_coding
chr10	100981376	100987494	100981376	100987494	-	ENST00000299179.9@MRPL43	ENST00000299179.9	protein_coding	100987313,100987090,100986749,100983755,100981376	100987494,100987196,100986975,100983817,100981543	Gene ID= ENSG00000055950.16 TPM= 6.37 Transcript Type= protein_coding
chr10	100981377	100987515	100981377	100987515	-	ENST00000342071.5@MRPL43	ENST00000342071.5	protein_coding	100987313,100987090,100986749,100983948,100983755,100981377	100987515,100987196,100986975,100984074,100983817,100981543	Gene ID= ENSG00000055950.16 TPM= 2.12 Transcript Type= protein_coding
chr10	100986276	100987515	100986276	100987515	-	ENST00000318364.12@MRPL43	ENST00000318364.12	protein_coding	100987313,100987090,100986276	100987515,100987196,100986975	Gene ID= ENSG00000055950.16 TPM= 32.05 Transcript Type= protein_coding
chr10	100986280	100987483	100986280	100987483	-	ENST00000370234.4@MRPL43	ENST00000370234.4	protein_coding	100987313,100987090,100986749,100986280	100987483,100987196,100986975,100986572	Gene ID= ENSG00000055950.16 TPM= 3.9 Transcript Type= protein_coding
chr10	100999302	101007836	100999302	101007836	+	transcript3831.chr10.nic@LZTS2	transcript3831.chr10.nic	protein_coding	100999302,101002497,101003507,101005458,101006485	100999952,101002946,101004166,101005715,101007836	Gene ID= ENSG00000107816.17 TPM= 107.6 Transcript Type= NA
chr10	100999797	101007836	100999797	101007836	+	transcript3833.chr10.nic@LZTS2	transcript3833.chr10.nic	protein_coding	100999797,101002497,101003507,101006485	100999952,101002946,101005715,101007836	Gene ID= ENSG00000107816.17 TPM= 7.75 Transcript Type= NA
chr10	100999818	101007836	100999818	101007836	+	transcript3834.chr10.nnic@LZTS2	transcript3834.chr10.nnic	protein_coding	100999818,101002497,101005458,101006485	100999952,101002946,101005715,101007836	Gene ID= ENSG00000107816.17 TPM= 7.22 Transcript Type= NA
chr10	100997072	101007836	100997072	101007836	+	ENST00000370223.7@LZTS2	ENST00000370223.7	protein_coding	100997072,101002497,101003507,101005458,101006485	100997234,101002946,101004166,101005715,101007836	Gene ID= ENSG00000107816.17 TPM= 56.08 Transcript Type= protein_coding
chr10	101017332	101031133	101017332	101031133	-	ENST00000370215.7@PDZD7	ENST00000370215.7	protein_coding	101031073,101029994,101023928,101023436,101022209,101021798,101020618,101018822,101018099,101017332	101031133,101030384,101024068,101023610,101022385,101021945,101020678,101019217,101018296,101017615	Gene ID= ENSG00000186862.17 TPM= 1.06 Transcript Type= protein_coding
chr10	101226195	101229794	101226195	101229794	-	ENST00000370193.3@LBX1	ENST00000370193.3	protein_coding	101228491,101226195	101229794,101227790	Gene ID= ENSG00000138136.6 TPM= 1.06 Transcript Type= protein_coding
chr10	101354081	101557319	101354081	101557319	+	transcript3845.chr10.nnic@BTRC	transcript3845.chr10.nnic	protein_coding	101354081,101407441,101430345,101461981,101479368,101521639,101526013,101531237,101532295,101532952,101534661,101535354,101536543,101538293,101550699,101553155	101354228,101407533,101430452,101462058,101479457,101521870,101526199,101531333,101532432,101533070,101534910,101535472,101536653,101538371,101550891,101557319	Gene ID= ENSG00000166167.17 TPM= 8.5 Transcript Type= NA
chr10	101354063	101557321	101354063	101557321	+	ENST00000370187.7@BTRC	ENST00000370187.7	protein_coding	101354063,101430345,101461981,101479368,101521639,101526013,101531237,101532295,101532952,101534661,101535354,101536543,101538293,101550699,101553155	101354228,101430452,101462058,101479457,101521870,101526199,101531333,101532432,101533070,101534910,101535472,101536653,101538371,101550891,101557321	Gene ID= ENSG00000166167.17 TPM= 14.87 Transcript Type= protein_coding
chr10	101588288	101609668	101588288	101609668	+	ENST00000370151.8@DPCD	ENST00000370151.8	protein_coding	101588288,101594658,101600738,101601203,101608835,101609367	101588400,101594738,101600862,101601336,101608937,101609668	Gene ID= ENSG00000166171.12 TPM= 27.62 Transcript Type= protein_coding
chr10	101578882	101588209	101578882	101588209	-	ENST00000299206.8@POLL	ENST00000299206.8	protein_coding	101587885,101587246,101585862,101585316,101584602,101583508,101582763,101580248,101578882	101588209,101587406,101586156,101585478,101584919,101583681,101582891,101580416,101579817	Gene ID= ENSG00000166169.16 TPM= 9.03 Transcript Type= protein_coding
chr10	101578882	101588126	101578882	101588126	-	ENST00000339310.7@POLL	ENST00000339310.7	protein_coding	101587246,101583508,101582763,101580248,101578882	101588126,101583681,101582891,101580416,101579817	Gene ID= ENSG00000166169.16 TPM= 5.84 Transcript Type= protein_coding
chr10	101610666	101695191	101610666	101695191	-	transcript3857.chr10.nnic@FBXW4	transcript3857.chr10.nnic	protein_coding	101694381,101676341,101673488,101672915,101667886,101627985,101624745,101612337,101611628,101610666	101695191,101676436,101673673,101673047,101667980,101628056,101624810,101612477,101611769,101611410	Gene ID= ENSG00000107829.13 TPM= 8.85 Transcript Type= NA
chr10	101610666	101695259	101610666	101695259	-	ENST00000331272.7@FBXW4	ENST00000331272.7	protein_coding	101694381,101676341,101673488,101672915,101667886,101624745,101612337,101611628,101610666	101695259,101676436,101673673,101673047,101667980,101624810,101612477,101611769,101611410	Gene ID= ENSG00000107829.13 TPM= 78.95 Transcript Type= protein_coding
chr10	101610666	101695191	101610666	101695191	-	transcript3866.chr10.nnic@FBXW4	transcript3866.chr10.nnic	protein_coding	101694381,101676341,101673488,101672915,101624745,101612337,101611628,101610666	101695191,101676436,101673673,101673047,101624810,101612477,101611769,101611410	Gene ID= ENSG00000107829.13 TPM= 12.03 Transcript Type= NA
chr10	101799289	101818442	101799289	101818442	-	transcript3889.chr10.nic@MGEA5	transcript3889.chr10.nic	protein_coding	101817824,101813555,101813030,101810184,101807730,101806045,101803735,101800242,101799289	101818442,101813606,101813127,101810314,101807901,101806143,101804019,101800400,101799455	Gene ID= ENSG00000198408.13 TPM= 11.68 Transcript Type= NA
chr10	101797690	101811432	101797690	101811432	-	transcript3891.chr10.nic@MGEA5	transcript3891.chr10.nic	protein_coding	101810184,101807730,101806045,101803735,101800242,101798842,101797690	101811432,101807901,101806143,101804019,101800400,101799455,101798154	Gene ID= ENSG00000198408.13 TPM= 43.55 Transcript Type= NA
chr10	101784443	101818418	101784443	101818418	-	ENST00000361464.7@MGEA5	ENST00000361464.7	protein_coding	101817824,101813555,101813030,101810184,101807730,101806045,101803735,101800242,101798842,101797980,101793913,101792839,101791354,101790896,101787364,101784443	101818418,101813606,101813127,101810314,101807901,101806143,101804019,101800400,101799455,101798154,101793998,101792943,101791439,101791088,101787523,101786587	Gene ID= ENSG00000198408.13 TPM= 42.49 Transcript Type= protein_coding
chr10	101808697	101810814	101808697	101810814	+	transcript3895.chr10.nnic@NA	transcript3895.chr10.nnic	NA	101808697	101810814	Gene ID= novel_gene_chr10_3896 TPM= 2.12 Transcript Type= NA
chr10	101845599	101939993	101845599	101939993	-	transcript3906.chr10.nic@C10orf76	transcript3906.chr10.nic	protein_coding	101939863,101889412,101849776,101845599	101939993,101889490,101849892,101847620	Gene ID= ENSG00000120029.12 TPM= 47.8 Transcript Type= NA
chr10	101845599	102056193	101845599	102056193	-	ENST00000370033.8@C10orf76	ENST00000370033.8	protein_coding	102056085,102040013,102033283,102033026,102029638,102025156,102023675,102023477,102013968,102012833,102011723,102009977,102009374,102006540,102001971,101995297,101993538,101991969,101990551,101975212,101957650,101956597,101939863,101889412,101849776,101845599	102056193,102040125,102033339,102033172,102029745,102025248,102023749,102023563,102014024,102012876,102011783,102010023,102009449,102006633,102002072,101995355,101993603,101992038,101990611,101975300,101957732,101956723,101939938,101889490,101849892,101847620	Gene ID= ENSG00000120029.12 TPM= 26.55 Transcript Type= protein_coding
chr10	102065390	102068038	102065390	102068038	+	ENST00000299238.6@HPS6	ENST00000299238.6	protein_coding	102065390	102068038	Gene ID= ENSG00000166189.7 TPM= 41.42 Transcript Type= protein_coding
chr10	102106492	102120496	102106492	102120496	-	transcript3915.chr10.nic@LDB1	transcript3915.chr10.nic	protein_coding	102120086,102111434,102111256,102111069,102110869,102110529,102109921,102109600,102109384,102106492	102120496,102111536,102111300,102111144,102110971,102110701,102110043,102109683,102109507,102109177	Gene ID= ENSG00000198728.10 TPM= 23.72 Transcript Type= NA
chr10	102107583	102120453	102107583	102120453	-	ENST00000425280.1@LDB1	ENST00000425280.1	protein_coding	102120086,102111434,102111256,102111069,102110869,102110529,102109921,102109600,102109384,102109029,102107583	102120453,102111536,102111300,102111144,102110971,102110701,102110043,102109683,102109507,102109177,102108323	Gene ID= ENSG00000198728.10 TPM= 21.06 Transcript Type= protein_coding
chr10	102152176	102163866	102152176	102163866	+	ENST00000605788.5@NOLC1	ENST00000605788.5	protein_coding	102152176,102157019,102157189,102157431,102158049,102159193,102159433,102159896,102160233,102160452,102161556,102161833,102162111	102152530,102157074,102157328,102157555,102158214,102159308,102159568,102160024,102160343,102161093,102161662,102161925,102163866	Gene ID= ENSG00000166197.16 TPM= 20.18 Transcript Type= protein_coding
chr10	102152176	102163871	102152176	102163871	+	ENST00000405356.5@NOLC1	ENST00000405356.5	protein_coding	102152176,102157019,102157189,102157431,102158049,102159193,102159433,102159896,102160233,102160452,102161556,102161833,102162111	102152530,102157074,102157328,102157555,102158214,102159338,102159568,102160024,102160343,102161093,102161662,102161925,102163871	Gene ID= ENSG00000166197.16 TPM= 12.75 Transcript Type= protein_coding
chr10	102152404	102162600	102152404	102162600	+	ENST00000488254.6@NOLC1	ENST00000488254.6	protein_coding	102152404,102157019,102157186,102157431,102158049,102159193,102159433,102159896,102160233,102160452,102161556,102161833,102162111	102152530,102157074,102157328,102157555,102158214,102159308,102159568,102160024,102160343,102161093,102161662,102161925,102162600	Gene ID= ENSG00000166197.16 TPM= 1.06 Transcript Type= protein_coding
chr10	102245532	102382899	102245532	102382899	+	ENST00000369983.3@GBF1	ENST00000369983.3	protein_coding	102245532,102258929,102260050,102344051,102351256,102351843,102352458,102353600,102358039,102358506,102359270,102360184,102361022,102361718,102362475,102363256,102363710,102365397,102366383,102367085,102367478,102368218,102368739,102369211,102369711,102369861,102370174,102370384,102370707,102375359,102376272,102376560,102376935,102379284,102379521,102379853,102380249,102380506,102381127,102382056	102245781,102259034,102260116,102344182,102351374,102351951,102352518,102353654,102358186,102358729,102359435,102360395,102361120,102361912,102362664,102363396,102363798,102365599,102366506,102367210,102367560,102368454,102368832,102369387,102369775,102369984,102370245,102370478,102370860,102375584,102376432,102376800,102377140,102379434,102379651,102379954,102380362,102380686,102381255,102382899	Gene ID= ENSG00000107862.4 TPM= 69.04 Transcript Type= protein_coding
chr10	102394110	102402529	102394110	102402529	+	ENST00000428099.5@NFKB2	ENST00000428099.5	protein_coding	102394110,102395888,102396253,102396449,102396725,102396904,102397302,102397527,102397981,102398212,102398385,102398739,102399288,102399577,102400080,102400278,102400655,102400947,102401180,102401449,102401745,102402048,102402255	102394600,102395980,102396334,102396489,102396823,102397055,102397408,102397685,102398085,102398297,102398523,102398864,102399497,102399718,102400194,102400491,102400824,102401049,102401331,102401518,102401917,102402159,102402529	Gene ID= ENSG00000077150.18 TPM= 9.56 Transcript Type= protein_coding
chr10	102395665	102402524	102395665	102402524	+	transcript3942.chr10.nic@NFKB2	transcript3942.chr10.nic	protein_coding	102395665,102396253,102396449,102396725,102396904,102397302,102397527,102397981,102398212,102398385,102398739,102399288,102399577,102400080,102400278,102400655,102400947,102401180,102401449,102401745,102402048,102402252	102395980,102396334,102396489,102396823,102397055,102397408,102397685,102398085,102398297,102398523,102398864,102399497,102399718,102400194,102400491,102400824,102401049,102401331,102401518,102401917,102402159,102402524	Gene ID= ENSG00000077150.18 TPM= 10.62 Transcript Type= NA
chr10	102395706	102402524	102395706	102402524	+	ENST00000189444.10@NFKB2	ENST00000189444.10	protein_coding	102395706,102395888,102396253,102396449,102396725,102396904,102397302,102397527,102397981,102398212,102398385,102398739,102399288,102399577,102400080,102400278,102400655,102400947,102401180,102401449,102401745,102402048,102402255	102395796,102395980,102396334,102396489,102396823,102397055,102397408,102397685,102398085,102398297,102398523,102398864,102399497,102399718,102400194,102400491,102400824,102401049,102401331,102401518,102401917,102402159,102402524	Gene ID= ENSG00000077150.18 TPM= 8.5 Transcript Type= protein_coding
chr10	102420806	102423136	102420806	102423136	+	transcript3946.chr10.nic@FBXL15	transcript3946.chr10.nic	protein_coding	102420806,102421052,102421354,102421787,102422804	102420957,102421182,102421507,102422292,102423136	Gene ID= ENSG00000107872.12 TPM= 14.6 Transcript Type= NA
chr10	102421183	102423136	102421183	102423136	+	transcript3948.chr10.nic@FBXL15	transcript3948.chr10.nic	protein_coding	102421183,102421787,102422804	102421507,102422292,102423136	Gene ID= ENSG00000107872.12 TPM= 40.1 Transcript Type= NA
chr10	102421191	102423136	102421191	102423136	+	transcript3949.chr10.nnic@FBXL15	transcript3949.chr10.nnic	protein_coding	102421191,102421787,102422804	102421306,102422292,102423136	Gene ID= ENSG00000107872.12 TPM= 3.98 Transcript Type= NA
chr10	102421201	102423136	102421201	102423136	+	transcript3950.chr10.nic@FBXL15	transcript3950.chr10.nic	protein_coding	102421201,102422804	102422292,102423136	Gene ID= ENSG00000107872.12 TPM= 18.85 Transcript Type= NA
chr10	102420593	102422822	102420593	102422822	-	transcript3953.chr10.nnic@NA	transcript3953.chr10.nnic	NA	102420593	102422822	Gene ID= novel_gene_chr10_3954 TPM= 2.12 Transcript Type= NA
chr10	102423245	102432661	102423245	102432661	-	ENST00000369937.4@CUEDC2	ENST00000369937.4	protein_coding	102432526,102425115,102424649,102424499,102424264,102423996,102423798,102423657,102423245	102432661,102425198,102424792,102424560,102424394,102424178,102423859,102423717,102423572	Gene ID= ENSG00000107874.10 TPM= 180.57 Transcript Type= protein_coding
chr10	102450626	102456293	102450626	102456293	+	transcript3962.chr10.nnic@RPARP-AS1	transcript3962.chr10.nnic	processed_transcript	102450626,102451399,102455337	102451018,102451555,102456293	Gene ID= ENSG00000269609.5 TPM= 2.12 Transcript Type= NA
chr10	102461395	102477045	102461395	102477045	+	ENST00000238936.8@MFSD13A	ENST00000238936.8	protein_coding	102461395,102465982,102468955,102469993,102470665,102471273,102472854,102473570,102473819,102475722	102461450,102466087,102469197,102470075,102471117,102471396,102472950,102473741,102474012,102477045	Gene ID= ENSG00000138111.14 TPM= 2.12 Transcript Type= protein_coding
chr10	102461395	102472250	102461395	102472250	+	transcript3974.chr10.nic@MFSD13A	transcript3974.chr10.nic	protein_coding	102461395,102465982,102468955,102469993,102470665,102471273,102472022	102461450,102466087,102469197,102470075,102471117,102471396,102472250	Gene ID= ENSG00000138111.14 TPM= 2.12 Transcript Type= NA
chr10	102479229	102502711	102479229	102502711	-	ENST00000369905.8@ACTR1A	ENST00000369905.8	protein_coding	102502600,102490549,102489063,102488150,102485609,102484160,102483011,102482001,102481837,102481132,102479229	102502711,102490613,102489138,102488275,102485733,102484376,102483103,102482175,102481898,102481172,102480965	Gene ID= ENSG00000138107.12 TPM= 271.38 Transcript Type= protein_coding
chr10	102490720	102491838	102490720	102491838	+	transcript3976.chr10.nnic@NA	transcript3976.chr10.nnic	NA	102490720	102491838	Gene ID= novel_gene_chr10_3977 TPM= 2.12 Transcript Type= NA
chr10	102498637	102502712	102498637	102502712	-	transcript3978.chr10.nnic@NA	transcript3978.chr10.nnic	NA	102498637	102502712	Gene ID= novel_gene_chr10_3979 TPM= 3.19 Transcript Type= NA
chr10	102631402	102633452	102631402	102633452	+	transcript3984.chr10.nnic@NA	transcript3984.chr10.nnic	NA	102631402	102633452	Gene ID= novel_gene_chr10_3985 TPM= 10.62 Transcript Type= NA
chr10	102642363	102643360	102642363	102643360	+	transcript3988.chr10.nnic@NA	transcript3988.chr10.nnic	NA	102642363	102643360	Gene ID= novel_gene_chr10_3989 TPM= 7.44 Transcript Type= NA
chr10	102743970	102816240	102743970	102816240	+	ENST00000448841.5@WBP1L	ENST00000448841.5	protein_coding	102743970,102797993,102809893,102812595	102744143,102798095,102810054,102816240	Gene ID= ENSG00000166272.16 TPM= 3.19 Transcript Type= protein_coding
chr10	102776249	102816267	102776249	102816267	+	ENST00000369889.5@WBP1L	ENST00000369889.5	protein_coding	102776249,102797993,102809893,102812595	102776417,102798095,102810054,102816267	Gene ID= ENSG00000166272.16 TPM= 10.62 Transcript Type= protein_coding
chr10	102854223	102864961	102854223	102864961	+	ENST00000339834.9@BORCS7	ENST00000339834.9	protein_coding	102854223,102860332,102860498,102862160,102862873	102854427,102860394,102860541,102862180,102864961	Gene ID= ENSG00000166275.15 TPM= 1.06 Transcript Type= protein_coding
chr10	102869469	102901892	102869469	102901892	+	transcript4013.chr10.nnic@AS3MT	transcript4013.chr10.nnic	protein_coding	102869469,102869805,102870084,102872448,102873097,102874592,102876954,102878379,102878849,102890544,102890656,102900593,102901453	102869593,102869845,102870211,102872598,102873233,102874661,102877035,102878510,102878991,102890654,102890678,102900783,102901892	Gene ID= ENSG00000214435.7 TPM= 3.45 Transcript Type= NA
chr10	102869469	102901899	102869469	102901899	+	transcript4020.chr10.nnic@AS3MT	transcript4020.chr10.nnic	protein_coding	102869469,102869805,102870084,102872448,102873097,102874592,102876954,102878379,102878849,102901472	102869593,102869845,102870211,102872598,102873233,102874661,102877035,102878510,102878949,102901899	Gene ID= ENSG00000214435.7 TPM= 2.39 Transcript Type= NA
chr10	102869516	102901894	102869516	102901894	+	ENST00000615257.1@AS3MT	ENST00000615257.1	protein_coding	102869516,102869805,102870084,102872448,102873097,102874592,102876954,102878379,102878849,102890544,102890656,102900593,102901475	102869593,102869845,102870211,102872598,102873233,102874661,102877035,102878510,102878991,102890654,102890678,102900799,102901894	Gene ID= ENSG00000214435.7 TPM= 6.64 Transcript Type= protein_coding
chr10	103088155	103193311	103088155	103193311	-	transcript4036.chr10.nnic@NT5C2	transcript4036.chr10.nnic	protein_coding	103193236,103181231,103174858,103139406,103111745,103106589,103105706,103101235,103101045,103099926,103098931,103097291,103095939,103094348,103093972,103093139,103091564,103090936,103090611,103088155	103193311,103181328,103174982,103139479,103111805,103106706,103105801,103101326,103101102,103100019,103098984,103097374,103095980,103094455,103094038,103093309,103091615,103090996,103090787,103089908	Gene ID= ENSG00000076685.18 TPM= 2.12 Transcript Type= NA
chr10	103088155	103193311	103088155	103193311	-	transcript4042.chr10.nnic@NT5C2	transcript4042.chr10.nnic	protein_coding	103193236,103181185,103174858,103139406,103106589,103105706,103101235,103101045,103099926,103098931,103097291,103095939,103094348,103093972,103093139,103091564,103090936,103090611,103088155	103193311,103181328,103174982,103139479,103106706,103105801,103101326,103101102,103100019,103098984,103097374,103095980,103094455,103094038,103093309,103091615,103090996,103090787,103089908	Gene ID= ENSG00000076685.18 TPM= 5.31 Transcript Type= NA
chr10	103088155	103193311	103088155	103193311	-	transcript4043.chr10.nnic@NT5C2	transcript4043.chr10.nnic	protein_coding	103193236,103181231,103174858,103139406,103106589,103105706,103101235,103101045,103099926,103098931,103097291,103095939,103094348,103093972,103093139,103091564,103090936,103090611,103088155	103193311,103181328,103174982,103139479,103106706,103105801,103101326,103101102,103100019,103098984,103097374,103095980,103094455,103094038,103093309,103091615,103090996,103090787,103089908	Gene ID= ENSG00000076685.18 TPM= 2.12 Transcript Type= NA
chr10	103088018	103193306	103088018	103193306	-	ENST00000343289.9@NT5C2	ENST00000343289.9	protein_coding	103193236,103174858,103139406,103106589,103105706,103101235,103101045,103099926,103098931,103097291,103095939,103094348,103093972,103093139,103091564,103090936,103090611,103088018	103193306,103174982,103139479,103106706,103105801,103101326,103101102,103100019,103098984,103097374,103095980,103094455,103094038,103093309,103091615,103090996,103090787,103089908	Gene ID= ENSG00000076685.18 TPM= 4.25 Transcript Type= protein_coding
chr10	103088155	103146214	103088155	103146214	-	transcript4047.chr10.nnic@NT5C2	transcript4047.chr10.nnic	protein_coding	103146030,103139406,103106589,103105706,103105358,103101235,103101045,103099926,103098931,103097291,103095939,103094348,103093972,103093139,103091564,103090936,103090611,103088155	103146214,103139479,103106706,103105801,103105381,103101326,103101102,103100019,103098984,103097374,103095980,103094455,103094038,103093309,103091615,103090996,103090787,103089908	Gene ID= ENSG00000076685.18 TPM= 2.12 Transcript Type= NA
chr10	103088155	103146265	103088155	103146265	-	transcript4048.chr10.nnic@NT5C2	transcript4048.chr10.nnic	protein_coding	103146030,103139406,103111745,103106589,103105706,103101235,103101045,103099926,103098931,103097291,103095939,103094348,103093972,103093139,103091564,103090936,103090611,103088155	103146265,103139479,103111805,103106706,103105801,103101326,103101102,103100019,103098984,103097374,103095980,103094455,103094038,103093309,103091615,103090996,103090787,103089908	Gene ID= ENSG00000076685.18 TPM= 2.12 Transcript Type= NA
chr10	103088155	103153600	103088155	103153600	-	transcript4049.chr10.nnic@NT5C2	transcript4049.chr10.nnic	protein_coding	103153291,103139406,103111745,103106589,103105706,103101235,103101045,103099926,103098931,103097291,103095939,103094348,103093972,103093139,103091564,103090936,103090611,103088155	103153600,103139479,103111805,103106706,103105801,103101326,103101102,103100019,103098984,103097374,103095980,103094455,103094038,103093309,103091615,103090996,103090787,103089908	Gene ID= ENSG00000076685.18 TPM= 2.12 Transcript Type= NA
chr10	103302796	103351134	103302796	103351134	-	ENST00000369847.3@PCGF6	ENST00000369847.3	protein_coding	103350707,103348900,103348716,103347395,103347238,103345024,103333925,103326534,103314186,103302796	103351134,103348999,103348812,103347450,103347297,103345132,103333952,103326632,103314272,103303961	Gene ID= ENSG00000156374.14 TPM= 23.37 Transcript Type= protein_coding
chr10	103302796	103351079	103302796	103351079	-	ENST00000337211.8@PCGF6	ENST00000337211.8	protein_coding	103350707,103348900,103348716,103333925,103326534,103314186,103302796	103351079,103348999,103348812,103333952,103326632,103314272,103303961	Gene ID= ENSG00000156374.14 TPM= 1.06 Transcript Type= protein_coding
chr10	103367957	103379670	103367957	103379670	+	transcript4076.chr10.nic@TAF5	transcript4076.chr10.nic	protein_coding	103367957,103373358,103378235,103379608	103368548,103373595,103378550,103379670	Gene ID= ENSG00000148835.10 TPM= 3.19 Transcript Type= NA
chr10	103367967	103389065	103367967	103389065	+	ENST00000369839.3@TAF5	ENST00000369839.3	protein_coding	103367967,103373358,103378235,103379608,103379884,103381721,103383238,103385326,103387175,103387521,103388006	103368548,103373595,103378550,103379771,103380019,103381841,103383367,103385490,103387352,103387698,103389065	Gene ID= ENSG00000148835.10 TPM= 5.31 Transcript Type= protein_coding
chr10	103380133	103380425	103380133	103380425	-	transcript4085.chr10.nnic@NA	transcript4085.chr10.nnic	NA	103380133	103380425	Gene ID= novel_gene_chr10_4086 TPM= 2.12 Transcript Type= NA
chr10	103389050	103396466	103389050	103396466	-	ENST00000309579.7@USMG5	ENST00000309579.7	protein_coding	103396409,103392371,103392191,103389050	103396466,103392466,103392283,103389166	Gene ID= ENSG00000173915.14 TPM= 692.67 Transcript Type= protein_coding
chr10	103389050	103396466	103389050	103396466	-	ENST00000337003.4@USMG5	ENST00000337003.4	protein_coding	103396409,103394199,103392371,103392191,103389050	103396466,103394394,103392466,103392283,103389166	Gene ID= ENSG00000173915.14 TPM= 7.57 Transcript Type= protein_coding
chr10	103389050	103396441	103389050	103396441	-	ENST00000369815.5@USMG5	ENST00000369815.5	protein_coding	103396409,103395746,103392371,103392191,103389050	103396441,103396032,103392466,103392283,103389166	Gene ID= ENSG00000173915.14 TPM= 34.13 Transcript Type= protein_coding
chr10	103396648	103446292	103396648	103446292	+	ENST00000369797.7@PDCD11	ENST00000369797.7	protein_coding	103396648,103398416,103400397,103403118,103405022,103405985,103406609,103409699,103413116,103413966,103414270,103415005,103416491,103417792,103418440,103419538,103421348,103422988,103423543,103424984,103427329,103432129,103433948,103434248,103434798,103438015,103438686,103439746,103440290,103440734,103441826,103442213,103443165,103443915,103444517,103445378	103396730,103398528,103400528,103403285,103405183,103406108,103406790,103409806,103413322,103414090,103414330,103415151,103416742,103417932,103418634,103419708,103421567,103423137,103423658,103425525,103427391,103432234,103434037,103434350,103434975,103438071,103438808,103439868,103440581,103440850,103441975,103442460,103443333,103444068,103444682,103446292	Gene ID= ENSG00000148843.13 TPM= 15.93 Transcript Type= protein_coding
chr10	103446786	103452402	103446786	103452402	-	ENST00000369788.7@CALHM2	ENST00000369788.7	protein_coding	103452156,103451083,103449387,103446786	103452402,103451182,103450099,103447568	Gene ID= ENSG00000138172.10 TPM= 4.96 Transcript Type= protein_coding
chr10	103446786	103452408	103446786	103452408	-	transcript4095.chr10.nnic@CALHM2	transcript4095.chr10.nnic	protein_coding	103452156,103449387,103446786	103452408,103450099,103447568	Gene ID= ENSG00000138172.10 TPM= 4.43 Transcript Type= NA
chr10	103446789	103452318	103446789	103452318	-	ENST00000260743.9@CALHM2	ENST00000260743.9	protein_coding	103452156,103451083,103449387,103446789	103452318,103451285,103450099,103447568	Gene ID= ENSG00000138172.10 TPM= 7.62 Transcript Type= protein_coding
chr10	103493979	103592552	103493979	103592552	+	ENST00000369780.8@NEURL1	ENST00000369780.8	protein_coding	103493979,103570872,103571501,103584536,103589514,103590134	103494472,103571113,103571822,103585225,103589660,103592552	Gene ID= ENSG00000107954.10 TPM= 1.06 Transcript Type= protein_coding
chr10	103601746	103661704	103601746	103661704	-	transcript4102.chr10.nic@SH3PXD2A	transcript4102.chr10.nic	protein_coding	103660983,103627089,103622470,103617197,103612853,103611581,103605798,103601746	103661704,103627202,103622553,103617314,103613190,103611630,103605917,103603789	Gene ID= ENSG00000107957.16 TPM= 8.5 Transcript Type= NA
chr10	103606691	103608175	103606691	103608175	+	transcript4113.chr10.nnic@NA	transcript4113.chr10.nnic	NA	103606691	103608175	Gene ID= novel_gene_chr10_4114 TPM= 2.12 Transcript Type= NA
chr10	103630571	103630763	103630571	103630763	+	transcript4109.chr10.nnic@NA	transcript4109.chr10.nnic	NA	103630571	103630763	Gene ID= novel_gene_chr10_4110 TPM= 3.19 Transcript Type= NA
chr10	103634080	103636425	103634080	103636425	+	transcript4111.chr10.nnic@NA	transcript4111.chr10.nnic	NA	103634080	103636425	Gene ID= novel_gene_chr10_4112 TPM= 3.19 Transcript Type= NA
chr10	103710187	103712062	103710187	103712062	+	transcript4107.chr10.nnic@NA	transcript4107.chr10.nnic	NA	103710187	103712062	Gene ID= novel_gene_chr10_4108 TPM= 3.19 Transcript Type= NA
chr10	103882542	103918205	103882542	103918205	-	ENST00000224950.7@STN1	ENST00000224950.7	protein_coding	103918100,103917462,103910527,103905091,103900062,103898877,103897548,103892130,103889072,103882542	103918205,103917656,103910622,103905156,103900223,103899000,103897719,103892252,103889144,103882841	Gene ID= ENSG00000107960.10 TPM= 55.76 Transcript Type= protein_coding
chr10	103882555	103918130	103882555	103918130	-	ENST00000466828.5@STN1	ENST00000466828.5	protein_coding	103918100,103917462,103910527,103905091,103900062,103898877,103898293,103897548,103892130,103889072,103882555	103918130,103917656,103910622,103905156,103900223,103899000,103898377,103897719,103892252,103889144,103882841	Gene ID= ENSG00000107960.10 TPM= 1.59 Transcript Type= processed_transcript
chr10	103967097	104003528	103967097	104003528	+	transcript4137.chr10.nic@SLK	transcript4137.chr10.nic	protein_coding	103967097,103990675,103992598,103992984,103998899,103999119,103999867,104001444,104002172	103967895,103990839,103992646,103993133,103998971,103999313,103999948,104001572,104003528	Gene ID= ENSG00000065613.13 TPM= 73.29 Transcript Type= NA
chr10	103967201	104029233	103967201	104029233	+	ENST00000335753.8@SLK	ENST00000335753.8	protein_coding	103967201,103990675,103992598,103992984,103998899,103999119,103999867,104001444,104002172,104005561,104005912,104008177,104018160,104018784,104019734,104020488,104021620,104025574	103967895,103990839,103992646,103993133,103998971,103999313,103999948,104001572,104003527,104005691,104006035,104008356,104018289,104018908,104019922,104020613,104021733,104029233	Gene ID= ENSG00000065613.13 TPM= 14.87 Transcript Type= protein_coding
chr10	104122165	104126385	104122165	104126385	+	ENST00000369727.3@SFR1	ENST00000369727.3	protein_coding	104122165,104122965,104123714,104125513	104122196,104123086,104124124,104126385	Gene ID= ENSG00000156384.14 TPM= 5.84 Transcript Type= protein_coding
chr10	104122058	104126385	104122058	104126385	+	ENST00000369729.7@SFR1	ENST00000369729.7	protein_coding	104122058,104122965,104123714,104125513	104122154,104123086,104124124,104126385	Gene ID= ENSG00000156384.14 TPM= 9.03 Transcript Type= protein_coding
chr10	104254710	104267459	104254710	104267459	+	ENST00000369710.8@GSTO1	ENST00000369710.8	protein_coding	104254710,104255163,104259576,104266084,104267252	104254962,104255271,104259798,104266190,104267459	Gene ID= ENSG00000148834.12 TPM= 9.56 Transcript Type= protein_coding
chr10	104254735	104267457	104254735	104267457	+	ENST00000369713.9@GSTO1	ENST00000369713.9	protein_coding	104254735,104255163,104259576,104262979,104266084,104267252	104254962,104255271,104259798,104263077,104266190,104267457	Gene ID= ENSG00000148834.12 TPM= 209.6 Transcript Type= protein_coding
chr10	104312131	104338404	104312131	104338404	-	ENST00000337478.2@ITPRIP	ENST00000337478.2	protein_coding	104338246,104312131	104338404,104316064	Gene ID= ENSG00000148841.15 TPM= 22.31 Transcript Type= protein_coding
chr10	104331502	104335943	104331502	104335943	+	transcript4157.chr10.nnic@NA	transcript4157.chr10.nnic	NA	104331502	104335943	Gene ID= novel_gene_chr10_4158 TPM= 6.37 Transcript Type= NA
chr10	104338909	104340421	104338909	104340421	-	transcript4162.chr10.nnic@NA	transcript4162.chr10.nnic	NA	104338909	104340421	Gene ID= novel_gene_chr10_4163 TPM= 3.19 Transcript Type= NA
chr10	105461493	105473276	105461493	105473276	-	transcript4165.chr10.nnic@NA	transcript4165.chr10.nnic	NA	105473179,105461493	105473276,105461628	Gene ID= novel_gene_chr10_4166 TPM= 8.5 Transcript Type= NA
chr10	109864768	109923515	109864768	109923515	-	transcript4175.chr10.nnic@XPNPEP1	transcript4175.chr10.nnic	protein_coding	109923402,109915011,109907691,109893012,109891722,109888503,109888049,109886246,109884067,109882432,109880842,109880188,109878000,109877790,109875528,109873367,109871792,109870731,109869953,109868614,109867529,109864768	109923515,109915099,109907815,109893075,109891826,109888595,109888192,109886341,109884148,109882642,109880931,109880238,109878058,109877867,109875599,109873427,109871861,109870904,109870029,109868712,109867586,109865312	Gene ID= ENSG00000108039.17 TPM= 3.72 Transcript Type= NA
chr10	109864766	109923553	109864766	109923553	-	ENST00000502935.5@XPNPEP1	ENST00000502935.5	protein_coding	109923402,109915011,109907691,109893012,109891722,109888503,109888049,109886246,109884067,109882432,109880842,109880188,109878000,109877790,109875528,109873367,109871792,109870731,109869953,109868614,109864766	109923553,109915099,109907815,109893075,109891826,109888595,109888192,109886341,109884148,109882642,109880931,109880238,109878058,109877867,109875599,109873427,109871861,109870904,109870029,109868712,109865312	Gene ID= ENSG00000108039.17 TPM= 76.51 Transcript Type= protein_coding
chr10	109864766	109923456	109864766	109923456	-	transcript4182.chr10.nic@XPNPEP1	transcript4182.chr10.nic	protein_coding	109923402,109907691,109893012,109891722,109888503,109888049,109886246,109884067,109882432,109880842,109880188,109878000,109877790,109875528,109873367,109871792,109870731,109869953,109868614,109864766	109923456,109907815,109893075,109891826,109888595,109888192,109886341,109884148,109882642,109880931,109880238,109878058,109877867,109875599,109873427,109871861,109870904,109870029,109868712,109865312	Gene ID= ENSG00000108039.17 TPM= 9.06 Transcript Type= NA
chr10	109864766	109923455	109864766	109923455	-	transcript4183.chr10.nic@XPNPEP1	transcript4183.chr10.nic	protein_coding	109923402,109915011,109907691,109893012,109891722,109888503,109886246,109884067,109882432,109880842,109880188,109878000,109877790,109875528,109873367,109871792,109870731,109869953,109868614,109864766	109923455,109915099,109907815,109893075,109891826,109888595,109886341,109884148,109882642,109880931,109880238,109878058,109877867,109875599,109873427,109871861,109870904,109870029,109868712,109865312	Gene ID= ENSG00000108039.17 TPM= 6.94 Transcript Type= NA
chr10	109864766	109923553	109864766	109923553	-	ENST00000322238.12@XPNPEP1	ENST00000322238.12	protein_coding	109923402,109915011,109907691,109893012,109891722,109888503,109888049,109886246,109884067,109882432,109880842,109880188,109878000,109877790,109873367,109871792,109870731,109869953,109868614,109864766	109923553,109915099,109907815,109893075,109891826,109888595,109888192,109886341,109884148,109882642,109880931,109880238,109878058,109877867,109873427,109871861,109870904,109870029,109868712,109865312	Gene ID= ENSG00000108039.17 TPM= 3.4 Transcript Type= protein_coding
chr10	110007981	110134330	110007981	110134330	+	transcript4198.chr10.nic@ADD3	transcript4198.chr10.nic	protein_coding	110007981,110079240,110100625,110112777,110116259,110117342,110118587,110119211,110119466,110122110,110124017,110125826,110126417,110130363,110133326	110008299,110079297,110100848,110112915,110116410,110117422,110118736,110119354,110119564,110122292,110124274,110125945,110126503,110130486,110134330	Gene ID= ENSG00000148700.14 TPM= 4.25 Transcript Type= NA
chr10	110005804	110134330	110005804	110134330	+	ENST00000360162.7@ADD3	ENST00000360162.7	protein_coding	110005804,110100625,110112777,110116259,110117342,110118587,110119211,110119466,110122110,110124017,110125826,110126417,110130363,110133326	110006151,110100848,110112915,110116410,110117422,110118736,110119354,110119564,110122292,110124274,110125945,110126503,110130486,110134330	Gene ID= ENSG00000148700.14 TPM= 16.99 Transcript Type= protein_coding
chr10	110007964	110135565	110007964	110135565	+	ENST00000277900.12@ADD3	ENST00000277900.12	protein_coding	110007964,110100625,110112777,110116259,110117342,110118587,110119211,110119466,110122110,110124017,110125826,110126417,110130363,110133326	110008299,110100848,110112915,110116410,110117422,110118736,110119354,110119564,110122292,110124274,110125945,110126503,110130486,110135565	Gene ID= ENSG00000148700.14 TPM= 8.5 Transcript Type= protein_coding
chr10	110065541	110068137	110065541	110068137	-	transcript4215.chr10.nnic@NA	transcript4215.chr10.nnic	NA	110065541	110068137	Gene ID= novel_gene_chr10_4216 TPM= 7.44 Transcript Type= NA
chr10	110207605	110287365	110207605	110287365	+	ENST00000332674.9@MXI1	ENST00000332674.9	protein_coding	110207605,110228189,110244828,110279180,110279914,110284824	110208082,110228321,110244857,110279294,110280085,110287365	Gene ID= ENSG00000119950.20 TPM= 7.44 Transcript Type= protein_coding
chr10	110225993	110286506	110225993	110286506	+	ENST00000239007.11@MXI1	ENST00000239007.11	protein_coding	110225993,110228189,110244828,110279180,110279914,110284824	110226283,110228321,110244857,110279294,110280085,110286506	Gene ID= ENSG00000119950.20 TPM= 44.61 Transcript Type= protein_coding
chr10	110497254	110497763	110497254	110497763	-	transcript4245.chr10.nnic@NA	transcript4245.chr10.nnic	NA	110497254	110497763	Gene ID= novel_gene_chr10_4246 TPM= 2.12 Transcript Type= NA
chr10	110497838	110511544	110497838	110511544	+	ENST00000369583.3@DUSP5	ENST00000369583.3	protein_coding	110497838,110502721,110506935,110510020	110498500,110502869,110507154,110511544	Gene ID= ENSG00000138166.5 TPM= 78.6 Transcript Type= protein_coding
chr10	110567684	110601789	110567684	110601789	+	transcript4252.chr10.nic@SMC3	transcript4252.chr10.nic	protein_coding	110567684,110568938,110573707,110575336,110577421,110577835,110578628,110580904,110581923,110582562,110583384,110583841,110584183,110589605,110589892,110590412,110590991,110593073,110596398,110598139,110599654,110600439,110601022,110601637	110567831,110569013,110573745,110575403,110577492,110577914,110578706,110581021,110582098,110582642,110583548,110583962,110584396,110589708,110589991,110590572,110591132,110593223,110596550,110598290,110599812,110600546,110601130,110601789	Gene ID= ENSG00000108055.9 TPM= 2.12 Transcript Type= NA
chr10	110567691	110604636	110567691	110604636	+	ENST00000361804.4@SMC3	ENST00000361804.4	protein_coding	110567691,110568938,110573707,110575336,110577421,110577835,110578628,110580904,110581923,110582562,110583384,110583841,110584183,110589605,110589892,110590412,110590991,110593073,110596398,110598139,110599654,110600439,110601022,110601637,110601966,110602474,110602825,110603184,110604231	110567831,110569013,110573745,110575403,110577492,110577914,110578706,110581021,110582098,110582642,110583548,110583962,110584396,110589708,110589991,110590572,110591132,110593223,110596550,110598290,110599812,110600546,110601130,110601884,110602178,110602665,110603002,110603290,110604636	Gene ID= ENSG00000108055.9 TPM= 20.18 Transcript Type= protein_coding
chr10	110643912	110813858	110643912	110813858	+	transcript4268.chr10.nic@RBM20	transcript4268.chr10.nic	protein_coding	110643912,110780801,110783366,110784341,110784792,110797508,110799787,110810383,110812278	110644645,110781884,110783427,110784432,110784889,110797648,110799918,110810462,110813858	Gene ID= ENSG00000203867.7 TPM= 6.9 Transcript Type= NA
chr10	110828021	110839469	110828021	110839469	+	transcript4272.chr10.nic@RBM20	transcript4272.chr10.nic	protein_coding	110828021,110835868	110831182,110839469	Gene ID= ENSG00000203867.7 TPM= 2.12 Transcript Type= NA
chr10	110644397	110839469	110644397	110839469	+	ENST00000369519.3@RBM20	ENST00000369519.3	protein_coding	110644397,110780801,110783366,110784341,110784792,110797508,110799787,110810383,110812278,110820072,110821275,110823480,110831061,110835868	110644645,110781884,110783427,110784432,110784889,110797648,110799918,110810462,110812947,110820176,110821935,110823614,110831182,110839469	Gene ID= ENSG00000203867.7 TPM= 128.52 Transcript Type= protein_coding
chr10	110644358	110646388	110644358	110646388	+	transcript4278.chr10.nnic@NA	transcript4278.chr10.nnic	NA	110644358	110646388	Gene ID= novel_gene_chr10_4279 TPM= 2.12 Transcript Type= NA
chr10	110649265	110650883	110649265	110650883	-	transcript4298.chr10.nnic@NA	transcript4298.chr10.nnic	NA	110649265	110650883	Gene ID= novel_gene_chr10_4299 TPM= 2.12 Transcript Type= NA
chr10	110699262	110702349	110699262	110702349	-	transcript4290.chr10.nnic@NA	transcript4290.chr10.nnic	NA	110699262	110702349	Gene ID= novel_gene_chr10_4291 TPM= 7.44 Transcript Type= NA
chr10	110734620	110735452	110734620	110735452	-	transcript4284.chr10.nnic@NA	transcript4284.chr10.nnic	NA	110734620	110735452	Gene ID= novel_gene_chr10_4285 TPM= 13.81 Transcript Type= NA
chr10	110752947	110756970	110752947	110756970	-	transcript4282.chr10.nnic@NA	transcript4282.chr10.nnic	NA	110752947	110756970	Gene ID= novel_gene_chr10_4283 TPM= 11.68 Transcript Type= NA
chr10	110763753	110766292	110763753	110766292	-	transcript4292.chr10.nnic@NA	transcript4292.chr10.nnic	NA	110763753	110766292	Gene ID= novel_gene_chr10_4293 TPM= 60.54 Transcript Type= NA
chr10	110766315	110768313	110766315	110768313	-	transcript4286.chr10.nnic@NA	transcript4286.chr10.nnic	NA	110766315	110768313	Gene ID= novel_gene_chr10_4287 TPM= 19.12 Transcript Type= NA
chr10	110805681	110809230	110805681	110809230	+	transcript4274.chr10.nnic@NA	transcript4274.chr10.nnic	NA	110805681	110809230	Gene ID= novel_gene_chr10_4275 TPM= 4.25 Transcript Type= NA
chr10	110871795	110900005	110871795	110900005	+	ENST00000393104.6@PDCD4	ENST00000393104.6	protein_coding	110871795,110875966,110876670,110881233,110883003,110885253,110887665,110889533,110890556,110894091,110894412,110895948,110898028	110872018,110876070,110876753,110881535,110883097,110885366,110887886,110889630,110890670,110894198,110894522,110896087,110900005	Gene ID= ENSG00000150593.17 TPM= 2.66 Transcript Type= protein_coding
chr10	110871807	110900006	110871807	110900006	+	ENST00000280154.11@PDCD4	ENST00000280154.11	protein_coding	110871807,110875966,110881233,110883003,110885253,110887665,110889533,110890556,110894091,110894412,110895948,110898028	110872018,110876070,110881535,110883097,110885366,110887886,110889630,110890670,110894198,110894522,110896087,110900006	Gene ID= ENSG00000150593.17 TPM= 3.72 Transcript Type= protein_coding
chr10	110871913	110898718	110871913	110898718	+	transcript4306.chr10.nic@PDCD4	transcript4306.chr10.nic	protein_coding	110871913,110875966,110881275,110883003,110885253,110887665,110889533,110890556,110894091,110894412,110895948,110898028	110872018,110876070,110881535,110883097,110885366,110887886,110889630,110890670,110894198,110894522,110896087,110898718	Gene ID= ENSG00000150593.17 TPM= 3.19 Transcript Type= NA
chr10	110898730	110919274	110898730	110919274	-	ENST00000448814.5@BBIP1	ENST00000448814.5	protein_coding	110919121,110918121,110901538,110898730	110919274,110918213,110901612,110900526	Gene ID= ENSG00000214413.7 TPM= 9.56 Transcript Type= protein_coding
chr10	110899956	110919201	110899956	110919201	-	ENST00000447005.5@BBIP1	ENST00000447005.5	protein_coding	110919121,110901538,110899956	110919201,110901612,110900526	Gene ID= ENSG00000214413.7 TPM= 1.06 Transcript Type= protein_coding
chr10	110919547	111013667	110919547	111013667	+	ENST00000369452.8@SHOC2	ENST00000369452.8	protein_coding	110919547,110964125,110985628,111000415,111004606,111007531,111009248,111009713,111011610	110919657,110965061,110985765,111000545,111004794,111007653,111009385,111009830,111013667	Gene ID= ENSG00000108061.11 TPM= 35.58 Transcript Type= protein_coding
chr10	110919582	111013664	110919582	111013664	+	transcript4317.chr10.nnic@SHOC2	transcript4317.chr10.nnic	protein_coding	110919582,110985628,111000415,111004606,111007531,111009248,111009713,111011610	110919657,110985765,111000545,111004794,111007653,111009385,111009830,111013664	Gene ID= ENSG00000108061.11 TPM= 4.78 Transcript Type= NA
chr10	110930737	110934506	110930737	110934506	-	transcript4320.chr10.nnic@NA	transcript4320.chr10.nnic	NA	110930737	110934506	Gene ID= novel_gene_chr10_4321 TPM= 2.12 Transcript Type= NA
chr10	110936591	110941297	110936591	110941297	-	transcript4318.chr10.nnic@NA	transcript4318.chr10.nnic	NA	110936591	110941297	Gene ID= novel_gene_chr10_4319 TPM= 7.44 Transcript Type= NA
chr10	112149864	112183763	112149864	112183763	-	ENST00000348367.8@GPAM	ENST00000348367.8	protein_coding	112183693,112182794,112181683,112180473,112177984,112175600,112173699,112172970,112172182,112168853,112168312,112166402,112164525,112163701,112161667,112160604,112159911,112158316,112157249,112155864,112154629,112149864	112183763,112182891,112181813,112180595,112178057,112175713,112173845,112173066,112172318,112168952,112168524,112166515,112164610,112163816,112161737,112160868,112160053,112158393,112157389,112156053,112154687,112153666	Gene ID= ENSG00000119927.13 TPM= 3.19 Transcript Type= protein_coding
chr10	112376199	112428380	112376199	112428380	+	ENST00000354273.4@ACSL5	ENST00000354273.4	protein_coding	112376199,112394918,112398901,112404511,112404705,112408422,112409507,112410463,112410584,112411456,112411902,112413173,112416888,112417846,112421593,112421947,112422325,112425338,112426258,112426788,112427218	112376448,112395102,112399009,112404575,112404806,112408521,112409685,112410495,112410635,112411529,112411979,112413307,112417022,112417941,112421665,112422035,112422441,112425481,112426359,112426859,112428380	Gene ID= ENSG00000197142.10 TPM= 6.37 Transcript Type= protein_coding
chr10	112430300	112446747	112430300	112446747	-	transcript4324.chr10.nic@ZDHHC6	transcript4324.chr10.nic	protein_coding	112446587,112445170,112443515,112442192,112440534,112438336,112434297,112433240,112432376,112432240,112430300	112446747,112445650,112443606,112442351,112440695,112438389,112434464,112433281,112432521,112432286,112430907	Gene ID= ENSG00000023041.11 TPM= 3.19 Transcript Type= NA
chr10	112430300	112446914	112430300	112446914	-	ENST00000369405.7@ZDHHC6	ENST00000369405.7	protein_coding	112446705,112445170,112443515,112442192,112440534,112438336,112434297,112433240,112432376,112432240,112430300	112446914,112445650,112443606,112442351,112440695,112438389,112434464,112433281,112432521,112432286,112430907	Gene ID= ENSG00000023041.11 TPM= 8.5 Transcript Type= protein_coding
chr10	112819139	112827723	112819139	112827723	+	transcript4338.chr10.nnic@NA	transcript4338.chr10.nnic	NA	112819139	112827723	Gene ID= novel_gene_chr10_4339 TPM= 4.25 Transcript Type= NA
chr10	112823490	112827726	112823490	112827726	+	ENST00000564352.1@AL158212.3	ENST00000564352.1	sense_overlapping	112823490	112827726	Gene ID= ENSG00000260917.1 TPM= 1.06 Transcript Type= sense_overlapping
chr10	112950250	113167678	112950250	113167678	+	ENST00000536810.5@TCF7L2	ENST00000536810.5	protein_coding	112950250,112951207,112951483,113040025,113141184,113143923,113146011,113150998,113151725,113152333,113158021,113159920,113165555	112950945,112951273,112951607,113040126,113141316,113144025,113146097,113151123,113151884,113152440,113158069,113159992,113167678	Gene ID= ENSG00000148737.16 TPM= 18.06 Transcript Type= protein_coding
chr10	113164506	113166032	113164506	113166032	-	transcript4343.chr10.nnic@NA	transcript4343.chr10.nnic	NA	113164506	113166032	Gene ID= novel_gene_chr10_4344 TPM= 2.12 Transcript Type= NA
chr10	113588833	113664042	113588833	113664042	-	transcript4353.chr10.nnic@NRAP	transcript4353.chr10.nnic	protein_coding	113663811,113663352,113662679,113657470,113654021,113652935,113651803,113650438,113650037,113646923,113645825,113641365,113640227,113634112,113633084,113631857,113631509,113629588,113628917,113626047,113624826,113623529,113621869,113620604,113617455,113615712,113614839,113614183,113612234,113610459,113608414,113606178,113605762,113604609,113597969,113597086,113595623,113590578,113589666,113588833	113664042,113663446,113662766,113657574,113654125,113653039,113651907,113650545,113650141,113647027,113645941,113641472,113640331,113634210,113633188,113631964,113631610,113629785,113629021,113626145,113624930,113623636,113622180,113620708,113617553,113615816,113614946,113614296,113612431,113610563,113608512,113606282,113605869,113604920,113598073,113597184,113595727,113590889,113589797,113589079	Gene ID= ENSG00000197893.13 TPM= 45.32 Transcript Type= NA
chr10	113588716	113664046	113588716	113664046	-	ENST00000369360.7@NRAP	ENST00000369360.7	protein_coding	113663811,113663352,113662679,113657470,113654021,113652935,113651803,113650438,113650037,113646923,113645825,113641365,113640227,113634112,113633084,113631853,113631509,113629588,113628917,113626047,113624826,113623529,113621869,113620604,113617455,113615712,113614839,113614183,113612234,113610459,113608414,113606178,113605762,113604609,113597969,113597086,113595623,113592194,113590578,113589666,113588716	113664046,113663446,113662766,113657574,113654125,113653039,113651907,113650545,113650141,113647027,113645941,113641472,113640331,113634210,113633188,113631964,113631630,113629785,113629021,113626145,113624930,113623636,113622180,113620708,113617553,113615816,113614946,113614296,113612431,113610563,113608512,113606282,113605869,113604920,113598073,113597184,113595727,113592301,113590889,113589797,113589079	Gene ID= ENSG00000197893.13 TPM= 26.92 Transcript Type= protein_coding
chr10	113588825	113664070	113588825	113664070	-	ENST00000360478.7@NRAP	ENST00000360478.7	protein_coding	113663811,113663352,113662679,113657470,113654021,113652935,113651803,113650438,113650037,113646923,113645825,113641365,113640227,113634112,113633084,113631857,113631509,113629588,113628917,113626047,113624826,113623529,113621869,113620604,113617455,113615712,113614839,113614183,113612234,113610459,113608414,113606178,113605762,113604609,113597969,113597086,113595623,113592194,113590578,113589666,113588825	113664070,113663446,113662766,113657574,113654125,113653039,113651907,113650545,113650141,113647027,113645941,113641472,113640331,113634210,113633188,113631964,113631610,113629785,113629021,113626145,113624930,113623636,113622180,113620708,113617553,113615816,113614946,113614296,113612431,113610563,113608512,113606282,113605869,113604920,113598073,113597184,113595727,113592301,113590889,113589797,113589079	Gene ID= ENSG00000197893.13 TPM= 507.89 Transcript Type= protein_coding
chr10	113592936	113599912	113592936	113599912	-	transcript4375.chr10.nnic@NA	transcript4375.chr10.nnic	NA	113592936	113599912	Gene ID= novel_gene_chr10_4376 TPM= 7.44 Transcript Type= NA
chr10	113608494	113610371	113608494	113610371	+	transcript4371.chr10.nnic@NA	transcript4371.chr10.nnic	NA	113608494	113610371	Gene ID= novel_gene_chr10_4372 TPM= 4.25 Transcript Type= NA
chr10	113644543	113645952	113644543	113645952	+	transcript4373.chr10.nnic@NA	transcript4373.chr10.nnic	NA	113644543	113645952	Gene ID= novel_gene_chr10_4374 TPM= 7.44 Transcript Type= NA
chr10	113679877	113730903	113679877	113730903	+	ENST00000369318.7@CASP7	ENST00000369318.7	protein_coding	113679877,113697494,113721032,113721651,113725362,113726305,113729311	113679978,113697603,113721168,113721779,113725537,113726434,113730903	Gene ID= ENSG00000165806.19 TPM= 3.19 Transcript Type= protein_coding
chr10	113834729	113854383	113834729	113854383	-	ENST00000369305.1@DCLRE1A	ENST00000369305.1	protein_coding	113854354,113852723,113848980,113847202,113845685,113844104,113842343,113841406,113837062,113834729	113854383,113853847,113850644,113847335,113845803,113844244,113842488,113841560,113837203,113835312	Gene ID= ENSG00000198924.7 TPM= 4.25 Transcript Type= protein_coding
chr10	113854661	113917194	113854661	113917194	+	ENST00000369301.3@NHLRC2	ENST00000369301.3	protein_coding	113854661,113858528,113876521,113879574,113884251,113898110,113901666,113902471,113903527,113904817,113908280	113855050,113858680,113876976,113879695,113884380,113898209,113901897,113902593,113903736,113905036,113917194	Gene ID= ENSG00000196865.4 TPM= 57.36 Transcript Type= protein_coding
chr10	114044056	114046908	114044056	114046908	+	ENST00000369295.3@ADRB1	ENST00000369295.3	protein_coding	114044056	114046908	Gene ID= ENSG00000043591.5 TPM= 24.43 Transcript Type= protein_coding
chr10	114127465	114174220	114127465	114174220	-	transcript4405.chr10.nic@CCDC186	transcript4405.chr10.nic	protein_coding	114174015,114173141,114162637,114157554,114151092,114145549,114144497,114137186,114136148,114135891,114134913,114131929,114131147,114129891,114127465	114174220,114173265,114163329,114157680,114151220,114145761,114144616,114137290,114136246,114135977,114135055,114132184,114131336,114129971,114127671	Gene ID= ENSG00000165813.18 TPM= 6.37 Transcript Type= NA
chr10	114161608	114174202	114161608	114174202	-	ENST00000369285.7@CCDC186	ENST00000369285.7	protein_coding	114174015,114173141,114161608	114174202,114173265,114163329	Gene ID= ENSG00000165813.18 TPM= 1.06 Transcript Type= protein_coding
chr10	114294824	114404756	114294824	114404756	-	ENST00000369271.7@AFAP1L2	ENST00000369271.7	protein_coding	114404440,114340603,114333221,114331803,114323171,114315560,114313871,114310354,114308433,114307805,114304719,114302339,114301354,114300445,114300194,114299260,114297232,114296978,114294824	114404756,114340731,114333295,114331897,114323261,114315765,114314050,114310443,114308517,114307909,114304930,114302484,114301465,114300690,114300362,114299415,114297413,114297100,114296068	Gene ID= ENSG00000169129.14 TPM= 2.12 Transcript Type= protein_coding
chr10	114431113	114632298	114431113	114632298	-	transcript4431.chr10.nnic@ABLIM1	transcript4431.chr10.nnic	protein_coding	114631902,114601827,114575416,114571297,114547650,114545005,114491791,114487958,114485297,114473879,114472977,114468181,114465698,114453379,114451624,114445312,114444029,114441722,114441017,114439259,114439176,114437844,114431113	114632298,114601961,114575599,114571406,114547776,114545098,114491878,114488016,114485380,114473956,114473132,114468216,114465827,114453483,114451671,114445403,114444134,114441786,114441077,114439263,114439253,114437924,114436373	Gene ID= ENSG00000099204.18 TPM= 48.63 Transcript Type= NA
chr10	114435441	114526835	114435441	114526835	-	ENST00000369253.6@ABLIM1	ENST00000369253.6	protein_coding	114526660,114491791,114487958,114472977,114468181,114465698,114451624,114447880,114445312,114444029,114441722,114441017,114440082,114439176,114437844,114435441	114526835,114491878,114488016,114473132,114468216,114465827,114451671,114448020,114445403,114444134,114441786,114441077,114440089,114439250,114437924,114436373	Gene ID= ENSG00000099204.18 TPM= 1.06 Transcript Type= protein_coding
chr10	114490813	114632224	114490813	114632224	-	transcript4480.chr10.nnic@ABLIM1	transcript4480.chr10.nnic	protein_coding	114631902,114601827,114575416,114571297,114547650,114545005,114490813	114632224,114601961,114575599,114571406,114547776,114545098,114491878	Gene ID= ENSG00000099204.18 TPM= 8.96 Transcript Type= NA
chr10	114453403	114456948	114453403	114456948	+	transcript4492.chr10.nnic@NA	transcript4492.chr10.nnic	NA	114453403	114456948	Gene ID= novel_gene_chr10_4493 TPM= 7.44 Transcript Type= NA
chr10	114490845	114495028	114490845	114495028	-	transcript4498.chr10.nnic@NA	transcript4498.chr10.nnic	NA	114490845	114495028	Gene ID= novel_gene_chr10_4499 TPM= 2.12 Transcript Type= NA
chr10	114821670	114864707	114821670	114864707	+	transcript4500.chr10.nnic@FAM160B1	transcript4500.chr10.nnic	protein_coding	114821670,114830852,114833233,114835537,114836124,114842933,114843741,114845367,114846013,114846175,114846559,114847090,114848647,114855197,114860749,114861231,114863649,114864526	114822123,114830930,114833402,114835641,114836246,114843226,114843937,114845481,114846089,114846367,114846728,114847233,114848737,114855340,114860889,114861334,114863679,114864707	Gene ID= ENSG00000151553.14 TPM= 17.53 Transcript Type= NA
chr10	114821744	114864717	114821744	114864717	+	ENST00000369248.8@FAM160B1	ENST00000369248.8	protein_coding	114821744,114830852,114833233,114835537,114836124,114842933,114843741,114845367,114846013,114846175,114846559,114847090,114848647,114855197,114860749,114861231,114861435	114822123,114830930,114833402,114835641,114836246,114843226,114843937,114845481,114846089,114846367,114846728,114847233,114848737,114855340,114860889,114861334,114864717	Gene ID= ENSG00000151553.14 TPM= 2.66 Transcript Type= protein_coding
chr10	114938193	114977676	114938193	114977676	+	ENST00000298746.4@TRUB1	ENST00000298746.4	protein_coding	114938193,114942645,114951094,114959726,114970368,114972135,114974329,114975123	114938539,114942743,114951149,114959807,114970440,114972274,114974385,114977676	Gene ID= ENSG00000165832.5 TPM= 44.61 Transcript Type= protein_coding
chr10	115093350	115167734	115093350	115167734	+	transcript4512.chr10.nnic@ATRNL1	transcript4512.chr10.nnic	protein_coding	115093350,115120185,115121699,115127593,115129327,115160040,115165558,115166475	115094043,115120268,115121812,115127721,115129535,115160214,115165645,115167734	Gene ID= ENSG00000107518.16 TPM= 2.12 Transcript Type= NA
chr10	115093365	115171376	115093365	115171376	+	ENST00000609571.5@ATRNL1	ENST00000609571.5	protein_coding	115093365,115120185,115121699,115127593,115129327,115160040,115165558,115171037	115094043,115120268,115121812,115127721,115129535,115160214,115165645,115171376	Gene ID= ENSG00000107518.16 TPM= 3.19 Transcript Type= protein_coding
chr10	116671192	116742574	116671192	116742574	-	ENST00000369209.7@HSPA12A	ENST00000369209.7	protein_coding	116742430,116707200,116705151,116700943,116698635,116692351,116683791,116681791,116681152,116679503,116676399,116671192	116742574,116707285,116705278,116701129,116698739,116692467,116683962,116681877,116681256,116679761,116676502,116675418	Gene ID= ENSG00000165868.13 TPM= 4.25 Transcript Type= protein_coding
chr10	116883377	117005577	116883377	117005577	-	ENST00000355371.8@SHTN1	ENST00000355371.8	protein_coding	117005022,116979256,116968652,116960136,116954042,116951909,116948916,116944924,116940466,116929849,116927792,116921434,116915375,116911790,116906627,116901765,116883377	117005577,116979308,116968712,116960230,116954210,116952006,116948997,116945018,116940612,116930002,116927891,116921516,116915484,116911843,116906747,116901957,116886566	Gene ID= ENSG00000187164.19 TPM= 1.06 Transcript Type= protein_coding
chr10	116881482	117005365	116881482	117005365	-	ENST00000615301.4@SHTN1	ENST00000615301.4	protein_coding	117005022,116979256,116968652,116960136,116954042,116951909,116948916,116944924,116940466,116929849,116927792,116921434,116915375,116911790,116881482	117005365,116979308,116968712,116960230,116954210,116952006,116948997,116945018,116940612,116930002,116927891,116921516,116915484,116911843,116886566	Gene ID= ENSG00000187164.19 TPM= 2.12 Transcript Type= protein_coding
chr10	117241093	117279430	117241093	117279430	+	ENST00000298472.9@SLC18A2	ENST00000298472.9	protein_coding	117241093,117241679,117243971,117253399,117254048,117254405,117255277,117255479,117255597,117257797,117266733,117266984,117267673,117270071,117270330,117277162	117241220,117241814,117244313,117253457,117254131,117254497,117255366,117255522,117255657,117257892,117266811,117267035,117267736,117270190,117270463,117279430	Gene ID= ENSG00000165646.11 TPM= 3.19 Transcript Type= protein_coding
chr10	117267116	117268668	117267116	117268668	-	ENST00000614747.1@AL391988.1	ENST00000614747.1	antisense_RNA	117267116	117268668	Gene ID= ENSG00000277879.1 TPM= 1.06 Transcript Type= antisense_RNA
chr10	117277274	117375467	117277274	117375467	-	ENST00000334464.6@PDZD8	ENST00000334464.6	protein_coding	117374356,117340980,117318872,117290186,117277274	117375467,117341102,117318974,117290348,117285471	Gene ID= ENSG00000165650.11 TPM= 24.43 Transcript Type= protein_coding
chr10	118039210	118046931	118039210	118046931	-	transcript4539.chr10.nic@RAB11FIP2	transcript4539.chr10.nic	protein_coding	118045811,118040123,118039210	118046931,118040565,118039440	Gene ID= ENSG00000107560.10 TPM= 16.99 Transcript Type= NA
chr10	118310746	118342320	118310746	118342320	-	ENST00000369172.8@FAM204A	ENST00000369172.8	protein_coding	118342270,118336182,118335554,118335396,118335114,118326154,118311207,118310746	118342320,118336423,118335641,118335426,118335213,118326243,118311313,118310908	Gene ID= ENSG00000165669.13 TPM= 5.31 Transcript Type= protein_coding
chr10	118676411	118755246	118676411	118755246	-	ENST00000369151.7@CACUL1	ENST00000369151.7	protein_coding	118754396,118730284,118729295,118707492,118701306,118695141,118691265,118686598,118676411	118755246,118730410,118729397,118707587,118701408,118695230,118691403,118686641,118686168	Gene ID= ENSG00000151893.14 TPM= 71.16 Transcript Type= protein_coding
chr10	119029716	119033732	119029716	119033732	+	ENST00000425699.2@NANOS1	ENST00000425699.2	protein_coding	119029716	119033732	Gene ID= ENSG00000188613.6 TPM= 9.56 Transcript Type= protein_coding
chr10	119030426	119031533	119030426	119031533	+	ENST00000340087.5@NANOS1	ENST00000340087.5	protein_coding	119030426	119031533	Gene ID= ENSG00000188613.6 TPM= 4.25 Transcript Type= protein_coding
chr10	119035045	119080810	119035045	119080810	-	transcript4572.chr10.nnic@EIF3A	transcript4572.chr10.nnic	protein_coding	119080628,119073747,119073441,119072890,119070886,119069446,119065399,119061224,119060746,119059602,119059212,119057956,119056936,119056740,119051199,119050521,119049801,119044054,119041994,119038238,119037119,119035045	119080810,119073937,119073577,119073053,119071005,119069654,119065570,119061328,119060844,119059718,119059397,119058303,119057040,119056853,119051321,119050674,119049985,119044142,119042772,119038439,119037309,119036268	Gene ID= ENSG00000107581.12 TPM= 34.52 Transcript Type= NA
chr10	119038345	119080886	119038345	119080886	-	transcript4575.chr10.nic@EIF3A	transcript4575.chr10.nic	protein_coding	119080628,119073747,119073441,119072890,119070886,119069446,119065399,119061224,119060746,119059602,119059212,119057956,119056936,119056740,119051199,119050521,119049801,119044054,119041994,119038345	119080886,119073937,119073577,119073053,119071085,119069654,119065570,119061328,119060844,119059718,119059397,119058303,119057040,119056853,119051321,119050674,119049985,119044142,119042772,119038439	Gene ID= ENSG00000107581.12 TPM= 18.99 Transcript Type= NA
chr10	119033670	119080804	119033670	119080804	-	ENST00000369144.7@EIF3A	ENST00000369144.7	protein_coding	119080628,119073747,119073441,119072890,119070886,119069446,119065399,119061224,119060746,119059602,119059212,119057956,119056936,119056740,119051199,119050521,119049801,119044054,119041994,119038238,119037119,119033670	119080804,119073937,119073577,119073053,119071085,119069654,119065570,119061328,119060844,119059718,119059397,119058303,119057040,119056853,119051321,119050674,119049985,119044142,119042772,119038439,119037309,119036268	Gene ID= ENSG00000107581.12 TPM= 6.25 Transcript Type= protein_coding
chr10	119035793	119080823	119035793	119080823	-	ENST00000541549.2@EIF3A	ENST00000541549.2	protein_coding	119080628,119073747,119073441,119072890,119070886,119069446,119065399,119061224,119060746,119059602,119059212,119057956,119056936,119056740,119051199,119050521,119049801,119044054,119041994,119038238,119037119,119036031,119035793	119080823,119073937,119073577,119073053,119071085,119069654,119065570,119061328,119060844,119059718,119059397,119058303,119057040,119056853,119051321,119050674,119049985,119044142,119042772,119038439,119037309,119036268,119035983	Gene ID= ENSG00000107581.12 TPM= 152.29 Transcript Type= protein_coding
chr10	119104077	119137709	119104077	119137709	+	transcript4610.chr10.nic@FAM45A	transcript4610.chr10.nic	protein_coding	119104077,119107948,119111849,119117519,119120341,119123469,119129515,119132515,119136471	119104197,119108164,119111928,119117667,119120452,119123569,119129622,119132609,119137709	Gene ID= ENSG00000119979.16 TPM= 3.19 Transcript Type= NA
chr10	119104117	119137195	119104117	119137195	+	ENST00000361432.2@FAM45A	ENST00000361432.2	protein_coding	119104117,119107968,119111849,119117519,119120341,119123469,119129515,119132515,119136471	119104197,119108164,119111928,119117667,119120452,119123569,119129622,119132609,119137195	Gene ID= ENSG00000119979.16 TPM= 15.93 Transcript Type= protein_coding
chr10	119140913	119165572	119140913	119165572	-	transcript4601.chr10.nic@SFXN4	transcript4601.chr10.nic	protein_coding	119165202,119164131,119162340,119161055,119160915,119159728,119158009,119157871,119157668,119156678,119155062,119147775,119146236,119140913	119165572,119164196,119162414,119161081,119160969,119159753,119158062,119157927,119157733,119156756,119155177,119147860,119146353,119141319	Gene ID= ENSG00000183605.16 TPM= 9.03 Transcript Type= NA
chr10	119140928	119165729	119140928	119165729	-	transcript4604.chr10.nnic@SFXN4	transcript4604.chr10.nnic	protein_coding	119165537,119164131,119160915,119159728,119158009,119157871,119157668,119156678,119155062,119147775,119146236,119142253,119140928	119165729,119164196,119162414,119159753,119158062,119157927,119157733,119156756,119155177,119147860,119146353,119142373,119141319	Gene ID= ENSG00000183605.16 TPM= 5.31 Transcript Type= NA
chr10	119140913	119165729	119140913	119165729	-	transcript4606.chr10.nic@SFXN4	transcript4606.chr10.nic	protein_coding	119165537,119164131,119160915,119159728,119158009,119157871,119157668,119156678,119155062,119147775,119146236,119140913	119165729,119164196,119162414,119159753,119158062,119157927,119157733,119156756,119155177,119147860,119146353,119141319	Gene ID= ENSG00000183605.16 TPM= 3.19 Transcript Type= NA
chr10	119140913	119165667	119140913	119165667	-	ENST00000355697.6@SFXN4	ENST00000355697.6	protein_coding	119165537,119164131,119162340,119161055,119160915,119159728,119158009,119157871,119157668,119156678,119155062,119147775,119146236,119140913	119165667,119164196,119162414,119161081,119160969,119159753,119158062,119157927,119157733,119156756,119155177,119147860,119146353,119141319	Gene ID= ENSG00000183605.16 TPM= 37.71 Transcript Type= protein_coding
chr10	119163400	119165524	119163400	119165524	-	transcript4623.chr10.nnic@NA	transcript4623.chr10.nnic	NA	119163400	119165524	Gene ID= novel_gene_chr10_4624 TPM= 3.19 Transcript Type= NA
chr10	119167703	119178833	119167703	119178833	-	ENST00000298510.3@PRDX3	ENST00000298510.3	protein_coding	119178755,119177021,119174451,119173737,119172382,119169177,119167703	119178833,119177153,119174592,119173872,119172485,119169342,119168533	Gene ID= ENSG00000165672.6 TPM= 891.15 Transcript Type= protein_coding
chr10	119207589	119455619	119207589	119455619	+	ENST00000392870.2@GRK5	ENST00000392870.2	protein_coding	119207589,119326516,119380815,119396695,119423166,119424993,119430375,119431387,119436651,119439731,119441999,119443544,119448123,119452671,119453145,119454969	119207969,119326611,119380927,119396772,119423266,119425085,119430438,119431527,119436841,119439768,119442088,119443752,119448260,119452808,119453276,119455619	Gene ID= ENSG00000198873.11 TPM= 13.81 Transcript Type= protein_coding
chr10	119226315	119227725	119226315	119227725	-	transcript4641.chr10.nnic@NA	transcript4641.chr10.nnic	NA	119226315	119227725	Gene ID= novel_gene_chr10_4642 TPM= 2.12 Transcript Type= NA
chr10	119411844	119413188	119411844	119413188	-	transcript4643.chr10.nnic@NA	transcript4643.chr10.nnic	NA	119411844	119413188	Gene ID= novel_gene_chr10_4644 TPM= 6.37 Transcript Type= NA
chr10	119499925	119542708	119499925	119542708	-	ENST00000369103.2@RGS10	ENST00000369103.2	protein_coding	119542590,119527306,119526032,119515509,119499925	119542708,119527424,119526118,119515652,119500259	Gene ID= ENSG00000148908.14 TPM= 2.12 Transcript Type= protein_coding
chr10	119651370	119677819	119651370	119677819	+	ENST00000369085.7@BAG3	ENST00000369085.7	protein_coding	119651370,119669851,119672255,119676464	119651855,119670177,119672656,119677819	Gene ID= ENSG00000151929.9 TPM= 468.41 Transcript Type= protein_coding
chr10	119656380	119659062	119656380	119659062	-	transcript4659.chr10.nnic@NA	transcript4659.chr10.nnic	NA	119656380	119659062	Gene ID= novel_gene_chr10_4660 TPM= 6.37 Transcript Type= NA
chr10	119831197	119872857	119831197	119872857	-	transcript4672.chr10.nnic@MCMBP	transcript4672.chr10.nnic	protein_coding	119872527,119859799,119859041,119858884,119857338,119853050,119849425,119847613,119843254,119842472,119840843,119838535,119836896,119832012,119831197	119872857,119859884,119859181,119858925,119857439,119853194,119849576,119847713,119843426,119842595,119840960,119838700,119837029,119832100,119831600	Gene ID= ENSG00000197771.12 TPM= 2.12 Transcript Type= NA
chr10	119831197	119872849	119831197	119872849	-	ENST00000369077.3@MCMBP	ENST00000369077.3	protein_coding	119872527,119859799,119859041,119858884,119857338,119853050,119849425,119847613,119843254,119842472,119840843,119838535,119836896,119835540,119832012,119831197	119872849,119859884,119859181,119858925,119857439,119853194,119849576,119847713,119843426,119842595,119840960,119838700,119837029,119835704,119832100,119831600	Gene ID= ENSG00000197771.12 TPM= 29.74 Transcript Type= protein_coding
chr10	120354701	120355183	120354701	120355183	-	ENST00000495531.1@RPL21P16	ENST00000495531.1	processed_pseudogene	120354701	120355183	Gene ID= ENSG00000220842.6 TPM= 19.12 Transcript Type= processed_pseudogene
chr10	120851175	120909524	120851175	120909524	+	ENST00000263461.10@WDR11	ENST00000263461.10	protein_coding	120851175,120852524,120858643,120860109,120862735,120865047,120865630,120866569,120867066,120871170,120873839,120878353,120880826,120883780,120885814,120886689,120889078,120889895,120890716,120900029,120901036,120902257,120903055,120904047,120904646,120905319,120905876,120906776,120908556	120851506,120852635,120858796,120860282,120862921,120865212,120865744,120866764,120867169,120871346,120873923,120878459,120880901,120883888,120885938,120886836,120889184,120890009,120890887,120900137,120901098,120902322,120903232,120904142,120904811,120905416,120906021,120906855,120909524	Gene ID= ENSG00000120008.15 TPM= 3.19 Transcript Type= protein_coding
chr10	120907295	120909523	120907295	120909523	+	ENST00000604714.1@WDR11	ENST00000604714.1	protein_coding	120907295	120909523	Gene ID= ENSG00000120008.15 TPM= 3.19 Transcript Type= processed_transcript
chr10	121740421	121928801	121740421	121928801	-	ENST00000540606.5@ATE1	ENST00000540606.5	protein_coding	121928347,121924266,121922349,121913790,121910906,121902391,121898841,121870006,121841082,121836718,121790169,121740421	121928801,121924329,121922411,121913893,121911151,121902620,121898969,121870038,121841263,121836817,121790289,121743858	Gene ID= ENSG00000107669.17 TPM= 4.25 Transcript Type= protein_coding
chr10	121740421	121928063	121740421	121928063	-	ENST00000224652.10@ATE1	ENST00000224652.10	protein_coding	121927844,121924266,121922349,121913790,121910906,121902391,121899866,121870006,121841082,121836718,121790169,121740421	121928063,121924329,121922411,121913893,121911151,121902620,121899994,121870038,121841263,121836817,121790289,121743858	Gene ID= ENSG00000107669.17 TPM= 10.09 Transcript Type= protein_coding
chr10	121740424	121928036	121740424	121928036	-	ENST00000369043.7@ATE1	ENST00000369043.7	protein_coding	121927844,121924266,121922349,121913790,121910906,121902391,121898841,121870006,121841082,121836718,121790169,121740424	121928036,121924329,121922411,121913893,121911151,121902620,121898969,121870038,121841263,121836817,121790289,121743858	Gene ID= ENSG00000107669.17 TPM= 24.96 Transcript Type= protein_coding
chr10	121876865	121881686	121876865	121881686	+	transcript4710.chr10.nnic@NA	transcript4710.chr10.nnic	NA	121876865	121881686	Gene ID= novel_gene_chr10_4711 TPM= 2.12 Transcript Type= NA
chr10	121957091	121975276	121957091	121975276	-	transcript4712.chr10.nnic@NSMCE4A	transcript4712.chr10.nnic	protein_coding	121974874,121974004,121970939,121967655,121965286,121963238,121961843,121961423,121960358,121959501,121959324,121957091	121975276,121974081,121971069,121967806,121965385,121963328,121961938,121961517,121960406,121959595,121959410,121957259	Gene ID= ENSG00000107672.14 TPM= 3.19 Transcript Type= NA
chr10	121957091	121975276	121957091	121975276	-	transcript4716.chr10.nnic@NSMCE4A	transcript4716.chr10.nnic	protein_coding	121974874,121974004,121970939,121967655,121965286,121963238,121961423,121960358,121959501,121959324,121957091	121975276,121974081,121971069,121967806,121965385,121963328,121961457,121960406,121959595,121959410,121957259	Gene ID= ENSG00000107672.14 TPM= 2.12 Transcript Type= NA
chr10	121957091	121974814	121957091	121974814	-	transcript4718.chr10.nic@NSMCE4A	transcript4718.chr10.nic	protein_coding	121974306,121974004,121970939,121967655,121965286,121963238,121961423,121960358,121959501,121959324,121957091	121974814,121974081,121971069,121967806,121965385,121963328,121961517,121960406,121959595,121959410,121957259	Gene ID= ENSG00000107672.14 TPM= 2.12 Transcript Type= NA
chr10	121957091	121974814	121957091	121974814	-	transcript4719.chr10.nic@NSMCE4A	transcript4719.chr10.nic	protein_coding	121974390,121974004,121970939,121967655,121965286,121963238,121961423,121960358,121959501,121959324,121957091	121974814,121974081,121971069,121967806,121965385,121963328,121961517,121960406,121959595,121959410,121957259	Gene ID= ENSG00000107672.14 TPM= 8.5 Transcript Type= NA
chr10	121957091	121975257	121957091	121975257	-	transcript4724.chr10.nic@NSMCE4A	transcript4724.chr10.nic	protein_coding	121974004,121970939,121967655,121965286,121963238,121961423,121960358,121959501,121959324,121957091	121975257,121971069,121967806,121965385,121963328,121961517,121960406,121959595,121959410,121957259	Gene ID= ENSG00000107672.14 TPM= 6.37 Transcript Type= NA
chr10	121957091	121975276	121957091	121975276	-	transcript4726.chr10.nnic@NSMCE4A	transcript4726.chr10.nnic	protein_coding	121974874,121974004,121970939,121967655,121965286,121963238,121961423,121960358,121959324,121957091	121975276,121974081,121971069,121967806,121965385,121963328,121961517,121960406,121959410,121957259	Gene ID= ENSG00000107672.14 TPM= 3.19 Transcript Type= NA
chr10	121957091	121975257	121957091	121975257	-	transcript4730.chr10.nic@NSMCE4A	transcript4730.chr10.nic	protein_coding	121974004,121970939,121967655,121965286,121963238,121961423,121959324,121957091	121975257,121971069,121967806,121965385,121963328,121961517,121960406,121957259	Gene ID= ENSG00000107672.14 TPM= 4.25 Transcript Type= NA
chr10	121957088	121975217	121957088	121975217	-	ENST00000369023.7@NSMCE4A	ENST00000369023.7	protein_coding	121974874,121974004,121970939,121967655,121965286,121963238,121961423,121960358,121959501,121959324,121957088	121975217,121974081,121971069,121967806,121965385,121963328,121961517,121960406,121959595,121959410,121957259	Gene ID= ENSG00000107672.14 TPM= 39.3 Transcript Type= protein_coding
chr10	121957141	121975216	121957141	121975216	-	ENST00000489266.5@NSMCE4A	ENST00000489266.5	protein_coding	121974004,121970939,121967655,121965286,121963238,121961841,121961423,121960358,121959501,121959324,121957141	121975216,121971069,121967806,121965385,121963328,121962107,121961517,121960406,121959595,121959410,121957259	Gene ID= ENSG00000107672.14 TPM= 1.06 Transcript Type= processed_transcript
chr10	122112997	122254538	122112997	122254538	+	transcript4735.chr10.nic@TACC2	transcript4735.chr10.nic	protein_coding	122112997,122132609,122195040,122210397,122215391,122216627,122224726,122226366,122227837,122229346,122230351,122237395,122237961,122241958,122248643,122249050,122249544,122253991	122113233,122132734,122195176,122211708,122215451,122216828,122224787,122226481,122228008,122229486,122230440,122237538,122238037,122242001,122248803,122249156,122249664,122254538	Gene ID= ENSG00000138162.18 TPM= 114.71 Transcript Type= NA
chr10	122113027	122254538	122113027	122254538	+	transcript4738.chr10.nic@TACC2	transcript4738.chr10.nic	protein_coding	122113027,122132609,122195040,122210397,122215391,122216627,122224726,122226366,122227837,122237395,122237961,122241958,122248643,122249050,122249544,122253991	122113233,122132734,122195176,122211708,122215451,122216828,122224787,122226481,122228008,122237538,122238037,122242001,122248803,122249156,122249664,122254538	Gene ID= ENSG00000138162.18 TPM= 19.12 Transcript Type= NA
chr10	122125778	122127799	122125778	122127799	-	transcript4752.chr10.nnic@NA	transcript4752.chr10.nnic	NA	122125778	122127799	Gene ID= novel_gene_chr10_4753 TPM= 11.68 Transcript Type= NA
chr10	122148099	122153935	122148099	122153935	-	transcript4754.chr10.nnic@NA	transcript4754.chr10.nnic	NA	122148099	122153935	Gene ID= novel_gene_chr10_4755 TPM= 24.43 Transcript Type= NA
chr10	122153001	122155282	122153001	122155282	-	transcript4750.chr10.nnic@NA	transcript4750.chr10.nnic	NA	122153001	122155282	Gene ID= novel_gene_chr10_4751 TPM= 6.37 Transcript Type= NA
chr10	122373730	122375244	122373730	122375244	-	transcript4780.chr10.nnic@NA	transcript4780.chr10.nnic	NA	122373730	122375244	Gene ID= novel_gene_chr10_4781 TPM= 2.12 Transcript Type= NA
chr10	122374540	122432345	122374540	122432345	+	transcript4762.chr10.nnic@PLEKHA1	transcript4762.chr10.nnic	protein_coding	122374540,122392303,122393181,122397918,122400343,122406576,122412920,122415859,122417900,122424199,122424896,122426942,122428276,122429624	122374806,122392372,122393341,122397974,122400388,122406673,122413045,122416002,122417968,122424263,122424959,122427031,122428316,122432345	Gene ID= ENSG00000107679.14 TPM= 27.97 Transcript Type= NA
chr10	122375134	122430128	122375134	122430128	+	transcript4769.chr10.nnic@PLEKHA1	transcript4769.chr10.nnic	protein_coding	122375134,122392303,122393181,122397918,122400343,122406576,122412920,122415859,122417900,122424199,122424896,122426942,122428276,122429624	122375552,122392372,122393341,122397974,122400388,122406673,122413045,122416002,122417968,122424263,122424959,122427031,122428316,122430128	Gene ID= ENSG00000107679.14 TPM= 2.12 Transcript Type= NA
chr10	122374622	122432345	122374622	122432345	+	transcript4772.chr10.nic@PLEKHA1	transcript4772.chr10.nic	protein_coding	122374622,122393181,122397918,122400343,122406576,122412920,122415859,122417900,122424199,122424896,122426942,122428276,122429624	122374806,122393341,122397974,122400388,122406673,122413045,122416002,122417968,122424263,122424959,122427031,122428316,122432345	Gene ID= ENSG00000107679.14 TPM= 9.56 Transcript Type= NA
chr10	122374751	122406394	122374751	122406394	+	transcript4776.chr10.nnic@PLEKHA1	transcript4776.chr10.nnic	protein_coding	122374751,122392303,122393181,122397918,122400343,122403717	122374806,122392372,122393341,122397974,122400388,122406394	Gene ID= ENSG00000107679.14 TPM= 2.12 Transcript Type= NA
chr10	122378359	122382288	122378359	122382288	-	transcript4782.chr10.nnic@NA	transcript4782.chr10.nnic	NA	122378359	122382288	Gene ID= novel_gene_chr10_4783 TPM= 3.19 Transcript Type= NA
chr10	122461525	122514908	122461525	122514908	+	ENST00000368984.7@HTRA1	ENST00000368984.7	protein_coding	122461525,122488902,122489422,122506691,122507370,122508656,122510096,122511970,122514191	122462124,122489001,122489626,122506885,122507402,122508770,122510153,122512065,122514908	Gene ID= ENSG00000166033.11 TPM= 148.17 Transcript Type= protein_coding
chr10	122506691	122514907	122506691	122514907	+	ENST00000420892.1@HTRA1	ENST00000420892.1	protein_coding	122506691,122507370,122508656,122510096,122511970,122514191	122506885,122507402,122508770,122510153,122512065,122514907	Gene ID= ENSG00000166033.11 TPM= 28.15 Transcript Type= protein_coding
chr10	122496230	122498241	122496230	122498241	-	transcript4791.chr10.nnic@NA	transcript4791.chr10.nnic	NA	122496230	122498241	Gene ID= novel_gene_chr10_4792 TPM= 6.37 Transcript Type= NA
chr10	122931508	122954403	122931508	122954403	-	ENST00000481909.1@C10orf88	ENST00000481909.1	protein_coding	122954015,122952829,122951954,122948649,122937705,122931508	122954403,122953032,122952026,122948855,122938159,122932661	Gene ID= ENSG00000119965.12 TPM= 8.5 Transcript Type= protein_coding
chr10	122990806	123008817	122990806	123008817	-	ENST00000368886.9@IKZF5	ENST00000368886.9	protein_coding	123008694,123007026,122998493,122995994,122990806	123008817,123007176,122998671,122996176,122994723	Gene ID= ENSG00000095574.11 TPM= 4.25 Transcript Type= protein_coding
chr10	123009001	123055137	123009001	123055137	+	transcript4810.chr10.nic@ACADSB	transcript4810.chr10.nic	protein_coding	123009001,123034356,123040466,123041209,123043046,123044393,123047209,123051049,123053061,123053695	123009071,123034515,123040672,123041379,123043171,123044485,123047298,123051186,123053160,123055137	Gene ID= ENSG00000196177.12 TPM= 5.31 Transcript Type= NA
chr10	123009016	123058311	123009016	123058311	+	ENST00000358776.6@ACADSB	ENST00000358776.6	protein_coding	123009016,123034356,123037747,123040466,123041209,123043046,123044393,123047209,123051049,123053061,123053695	123009071,123034515,123037847,123040672,123041379,123043171,123044485,123047298,123051186,123053160,123058311	Gene ID= ENSG00000196177.12 TPM= 15.93 Transcript Type= protein_coding
chr10	123154277	123170467	123154277	123170467	+	ENST00000368865.8@BUB3	ENST00000368865.8	protein_coding	123154277,123154918,123155658,123157729,123160407,123162236,123162612,123163820	123154485,123155112,123155727,123157880,123160565,123162413,123162828,123170467	Gene ID= ENSG00000154473.17 TPM= 3.19 Transcript Type= protein_coding
chr10	123154368	123165365	123154368	123165365	+	transcript4818.chr10.nic@BUB3	transcript4818.chr10.nic	protein_coding	123154368,123154918,123155658,123157729,123160407,123162236,123162612	123154485,123155112,123155727,123157880,123160565,123162413,123165365	Gene ID= ENSG00000154473.17 TPM= 6.37 Transcript Type= NA
chr10	123154415	123165365	123154415	123165365	+	ENST00000368858.9@BUB3	ENST00000368858.9	protein_coding	123154415,123154918,123155658,123157729,123160407,123162236,123162612,123165047	123154485,123155112,123155727,123157880,123160565,123162413,123162828,123165365	Gene ID= ENSG00000154473.17 TPM= 26.55 Transcript Type= protein_coding
chr10	123156755	123161829	123156755	123161829	-	transcript4819.chr10.nnic@NA	transcript4819.chr10.nnic	NA	123156755	123161829	Gene ID= novel_gene_chr10_4820 TPM= 2.12 Transcript Type= NA
chr10	123745636	123891814	123745636	123891814	-	ENST00000241305.3@CPXM2	ENST00000241305.3	protein_coding	123891356,123880211,123862614,123842349,123799115,123797976,123780167,123770916,123768526,123766973,123761872,123757213,123754663,123745636	123891814,123880309,123862723,123842488,123799199,123798126,123780255,123771039,123768722,123767152,123762169,123757352,123754762,123747017	Gene ID= ENSG00000121898.12 TPM= 19.12 Transcript Type= protein_coding
chr10	124397303	124418976	124397303	124418976	-	ENST00000539214.5@OAT	ENST00000539214.5	protein_coding	124418873,124408741,124408542,124405436,124403798,124402927,124401726,124400840,124397303	124418976,124408965,124408637,124405563,124403920,124403055,124401839,124400984,124398102	Gene ID= ENSG00000065154.11 TPM= 7.44 Transcript Type= protein_coding
chr10	124397307	124418936	124397307	124418936	-	ENST00000368845.5@OAT	ENST00000368845.5	protein_coding	124418873,124411973,124408741,124408542,124405436,124403798,124402927,124401726,124400840,124397307	124418936,124412200,124408965,124408637,124405563,124403920,124403055,124401839,124400984,124398102	Gene ID= ENSG00000065154.11 TPM= 75.41 Transcript Type= protein_coding
chr10	124461835	124614141	124461835	124614141	+	ENST00000368842.9@LHPP	ENST00000368842.9	protein_coding	124461835,124484139,124488422,124496961,124498036,124517180,124613264	124461987,124484326,124488575,124497024,124498128,124517271,124614141	Gene ID= ENSG00000107902.13 TPM= 12.75 Transcript Type= protein_coding
chr10	124461834	124498514	124461834	124498514	+	ENST00000392757.8@LHPP	ENST00000392757.8	protein_coding	124461834,124484139,124488422,124496961,124498036,124498328	124461987,124484326,124488575,124497024,124498128,124498514	Gene ID= ENSG00000107902.13 TPM= 8.5 Transcript Type= protein_coding
chr10	124619292	124791887	124619292	124791887	-	transcript4841.chr10.nnic@AC068896.1	transcript4841.chr10.nnic	protein_coding	124791724,124790273,124789043,124774675,124765392,124762300,124760318,124706636,124696158,124681607,124619292	124791887,124790338,124789157,124774782,124765608,124762558,124760503,124706887,124696212,124682379,124623604	Gene ID= ENSG00000258539.1 TPM= 25.49 Transcript Type= NA
chr10	124757838	124791887	124757838	124791887	-	transcript4852.chr10.nic@AC068896.1	transcript4852.chr10.nic	protein_coding	124791724,124790273,124789043,124774675,124765392,124757838	124791887,124790338,124789157,124774782,124765608,124760503	Gene ID= ENSG00000258539.1 TPM= 2.12 Transcript Type= NA
chr10	124703625	124714217	124703625	124714217	+	ENST00000448422.2@FAM53B-AS1	ENST00000448422.2	antisense_RNA	124703625,124713434	124704331,124714217	Gene ID= ENSG00000233334.3 TPM= 1.06 Transcript Type= antisense_RNA
chr10	124757831	124791868	124757831	124791868	-	ENST00000466270.5@EEF1AKMT2	ENST00000466270.5	protein_coding	124791724,124790273,124789039,124774675,124765392,124762300,124757831	124791868,124790338,124789157,124774782,124765608,124762558,124760503	Gene ID= ENSG00000203791.14 TPM= 2.12 Transcript Type= nonsense_mediated_decay
chr10	124759954	124791870	124759954	124791870	-	ENST00000368836.6@EEF1AKMT2	ENST00000368836.6	protein_coding	124791724,124790273,124789043,124774675,124765392,124762300,124759954	124791870,124790338,124789157,124774782,124765608,124762558,124760503	Gene ID= ENSG00000203791.14 TPM= 3.19 Transcript Type= protein_coding
chr10	124760146	124791868	124760146	124791868	-	ENST00000464099.5@EEF1AKMT2	ENST00000464099.5	protein_coding	124791724,124790273,124789039,124774675,124765392,124760146	124791868,124790338,124789157,124774782,124765608,124760503	Gene ID= ENSG00000203791.14 TPM= 1.06 Transcript Type= nonsense_mediated_decay
chr10	124765326	124769232	124765326	124769232	+	transcript4871.chr10.nnic@NA	transcript4871.chr10.nnic	NA	124765326	124769232	Gene ID= novel_gene_chr10_4872 TPM= 6.37 Transcript Type= NA
chr10	124801769	124831436	124801769	124831436	+	transcript4877.chr10.nic@ABRAXAS2	transcript4877.chr10.nic	protein_coding	124801769,124806831,124816576,124819384,124826595,124828756,124829393,124831349	124801901,124806921,124816612,124819450,124826785,124828875,124829477,124831436	Gene ID= ENSG00000165660.7 TPM= 2.12 Transcript Type= NA
chr10	124801785	124836670	124801785	124836670	+	ENST00000298492.5@ABRAXAS2	ENST00000298492.5	protein_coding	124801785,124806831,124816576,124819384,124826595,124828756,124829393,124831349,124834502	124801901,124806921,124816612,124819450,124826785,124828875,124829477,124831463,124836670	Gene ID= ENSG00000165660.7 TPM= 14.87 Transcript Type= protein_coding
chr10	124916861	124986464	124916861	124986464	+	transcript4890.chr10.nnic@ZRANB1	transcript4890.chr10.nnic	protein_coding	124916861,124940374,124942457,124966594,124971965,124973645,124974200,124981709,124983175,124983459,124984774	124917272,124940547,124943307,124966781,124972118,124973716,124974398,124981829,124983304,124983688,124986464	Gene ID= ENSG00000019995.6 TPM= 9.56 Transcript Type= NA
chr10	124916859	124986464	124916859	124986464	+	transcript4903.chr10.nic@ZRANB1	transcript4903.chr10.nic	protein_coding	124916859,124942457,124966594,124971965,124973645,124974200,124981709,124983175,124983459,124984774	124917272,124943307,124966781,124972118,124973716,124974398,124981829,124983304,124983688,124986464	Gene ID= ENSG00000019995.6 TPM= 13.81 Transcript Type= NA
chr10	124916873	124986464	124916873	124986464	+	transcript4914.chr10.nnic@ZRANB1	transcript4914.chr10.nnic	protein_coding	124916873,124966594,124971965,124973645,124974200,124981709,124983175,124983459,124984774	124917272,124966781,124972118,124973716,124974398,124981829,124983304,124983688,124986464	Gene ID= ENSG00000019995.6 TPM= 4.25 Transcript Type= NA
chr10	124916896	124918348	124916896	124918348	-	transcript4926.chr10.nnic@NA	transcript4926.chr10.nnic	NA	124916896	124918348	Gene ID= novel_gene_chr10_4927 TPM= 4.25 Transcript Type= NA
chr10	124988883	125160591	124988883	125160591	-	transcript4907.chr10.nic@CTBP2	transcript4907.chr10.nic	protein_coding	125160319,125038997,125003338,125002960,124997964,124994469,124993855,124993202,124992695,124988883	125160591,125039155,125003492,125003104,124998170,124994683,124993985,124993329,124992812,124989698	Gene ID= ENSG00000175029.16 TPM= 4.25 Transcript Type= NA
chr10	125008139	125010240	125008139	125010240	+	transcript4924.chr10.nnic@NA	transcript4924.chr10.nnic	NA	125008139	125010240	Gene ID= novel_gene_chr10_4925 TPM= 10.62 Transcript Type= NA
chr10	125082591	125084765	125082591	125084765	-	transcript4928.chr10.nnic@NA	transcript4928.chr10.nnic	NA	125082591	125084765	Gene ID= novel_gene_chr10_4929 TPM= 2.12 Transcript Type= NA
chr10	125719703	125764139	125719703	125764139	+	ENST00000337623.7@EDRF1	ENST00000337623.7	protein_coding	125719703,125721204,125723068,125723811,125725318,125725682,125729358,125730288,125733404,125733635,125734072,125735644,125737918,125738295,125740463,125741001,125743058,125745707,125747536,125747863,125749412,125752799,125753694,125763301	125719915,125721412,125723134,125723936,125725442,125725838,125729479,125730399,125733551,125733743,125734183,125735904,125737989,125738445,125740651,125741201,125743276,125745930,125747694,125748012,125749565,125752914,125753845,125764139	Gene ID= ENSG00000107938.17 TPM= 7.44 Transcript Type= protein_coding
chr10	125719703	125728052	125719703	125728052	+	transcript4936.chr10.nic@EDRF1	transcript4936.chr10.nic	protein_coding	125719703,125721204,125723068,125723811,125725318,125725682	125719915,125721412,125723134,125723936,125725442,125728052	Gene ID= ENSG00000107938.17 TPM= 2.12 Transcript Type= NA
chr10	125788583	125823287	125788583	125823287	-	transcript4941.chr10.nnic@UROS	transcript4941.chr10.nnic	protein_coding	125823029,125816437,125816177,125815034,125812214,125807413,125798065,125796790,125796103,125794880,125788583	125823287,125816525,125816260,125815130,125812288,125807487,125798145,125796861,125796188,125794978,125789005	Gene ID= ENSG00000188690.12 TPM= 4.46 Transcript Type= NA
chr10	125788578	125823227	125788578	125823227	-	ENST00000368797.8@UROS	ENST00000368797.8	protein_coding	125823029,125816437,125816177,125815034,125812214,125807413,125798065,125796103,125794880,125788578	125823227,125816525,125816260,125815130,125812288,125807487,125798145,125796188,125794978,125789005	Gene ID= ENSG00000188690.12 TPM= 27.27 Transcript Type= protein_coding
chr10	125793528	125823287	125793528	125823287	-	transcript4946.chr10.nic@UROS	transcript4946.chr10.nic	protein_coding	125823029,125816437,125816177,125815034,125812214,125807413,125798065,125796103,125794880,125793528	125823287,125816525,125816260,125815130,125812288,125807487,125798145,125796188,125794978,125794388	Gene ID= ENSG00000188690.12 TPM= 6.37 Transcript Type= NA
chr10	125788583	125823287	125788583	125823287	-	transcript4947.chr10.nnic@UROS	transcript4947.chr10.nnic	protein_coding	125823029,125816437,125816177,125815034,125812214,125807413,125796103,125794880,125788583	125823287,125816525,125816260,125815130,125812288,125807487,125796188,125794978,125789005	Gene ID= ENSG00000188690.12 TPM= 6.37 Transcript Type= NA
chr10	125802057	125823196	125802057	125823196	-	ENST00000368778.7@UROS	ENST00000368778.7	protein_coding	125823029,125816437,125816177,125815034,125812214,125807413,125802057	125823196,125816525,125816260,125815130,125812288,125807487,125803024	Gene ID= ENSG00000188690.12 TPM= 2.12 Transcript Type= protein_coding
chr10	125823538	125836553	125823538	125836553	+	transcript4972.chr10.nnic@BCCIP	transcript4972.chr10.nnic	protein_coding	125823538,125827558,125830562,125831420,125833772,125836104	125823722,125827638,125830651,125831607,125833946,125836553	Gene ID= ENSG00000107949.16 TPM= 3.19 Transcript Type= NA
chr10	125823546	125842805	125823546	125842805	+	ENST00000299130.7@BCCIP	ENST00000299130.7	protein_coding	125823546,125826591,125827558,125830562,125831420,125833772,125841255	125823722,125826665,125827638,125830651,125831607,125833946,125842805	Gene ID= ENSG00000107949.16 TPM= 16.99 Transcript Type= protein_coding
chr10	125823546	125836553	125823546	125836553	+	ENST00000278100.10@BCCIP	ENST00000278100.10	protein_coding	125823546,125826591,125827558,125830562,125831420,125833772,125836104	125823722,125826665,125827638,125830651,125831607,125833946,125836553	Gene ID= ENSG00000107949.16 TPM= 47.8 Transcript Type= protein_coding
chr10	125823546	125853695	125823546	125853695	+	ENST00000368759.5@BCCIP	ENST00000368759.5	protein_coding	125823546,125826591,125827558,125830562,125831420,125833772,125841255,125853125	125823722,125826665,125827638,125830651,125831607,125833946,125841330,125853695	Gene ID= ENSG00000107949.16 TPM= 2.12 Transcript Type= protein_coding
chr10	125823552	125827003	125823552	125827003	+	transcript4978.chr10.nnic@NA	transcript4978.chr10.nnic	NA	125823552	125827003	Gene ID= novel_gene_chr10_4979 TPM= 2.12 Transcript Type= NA
chr10	125836337	125896486	125836337	125896486	-	transcript4954.chr10.nnic@DHX32	transcript4954.chr10.nnic	protein_coding	125896218,125885365,125880543,125866990,125859603,125853961,125852543,125852293,125841743,125840847,125839001,125838206,125836337	125896486,125885562,125881071,125867183,125859975,125854203,125852642,125852451,125841934,125840996,125839188,125838387,125836855	Gene ID= ENSG00000089876.11 TPM= 3.03 Transcript Type= NA
chr10	125836337	125896495	125836337	125896495	-	transcript4955.chr10.nnic@DHX32	transcript4955.chr10.nnic	protein_coding	125896218,125885365,125880543,125866990,125859603,125853961,125852543,125852293,125841743,125840847,125839001,125838206,125836337	125896495,125885676,125881071,125867183,125859975,125854203,125852642,125852451,125841934,125840996,125839188,125838387,125836855	Gene ID= ENSG00000089876.11 TPM= 18.96 Transcript Type= NA
chr10	125836337	125896495	125836337	125896495	-	transcript4956.chr10.nnic@DHX32	transcript4956.chr10.nnic	protein_coding	125896218,125885629,125880543,125866990,125859603,125853961,125852543,125852293,125841743,125840847,125839001,125838206,125836337	125896495,125885676,125881071,125867183,125859975,125854203,125852642,125852451,125841934,125840996,125839188,125838387,125836855	Gene ID= ENSG00000089876.11 TPM= 3.03 Transcript Type= NA
chr10	125836337	125896497	125836337	125896497	-	transcript4959.chr10.nic@DHX32	transcript4959.chr10.nic	protein_coding	125896218,125880543,125866990,125859603,125853961,125852543,125852293,125841743,125840847,125839001,125838206,125836337	125896497,125881071,125867183,125859975,125854203,125852642,125852451,125841934,125840996,125839188,125838387,125836855	Gene ID= ENSG00000089876.11 TPM= 33.83 Transcript Type= NA
chr10	125879016	125896495	125879016	125896495	-	transcript4976.chr10.nnic@DHX32	transcript4976.chr10.nnic	protein_coding	125896218,125885365,125879016	125896495,125885676,125881071	Gene ID= ENSG00000089876.11 TPM= 4.25 Transcript Type= NA
chr10	125836340	125881315	125836340	125881315	-	ENST00000284690.3@DHX32	ENST00000284690.3	protein_coding	125880543,125866990,125859603,125853961,125852543,125852293,125841743,125840847,125839001,125838206,125836340	125881315,125867183,125859975,125854203,125852642,125852451,125841934,125840996,125839188,125838387,125836855	Gene ID= ENSG00000089876.11 TPM= 18.69 Transcript Type= protein_coding
chr10	125848082	125850152	125848082	125850152	+	transcript4980.chr10.nnic@NA	transcript4980.chr10.nnic	NA	125848082	125850152	Gene ID= novel_gene_chr10_4981 TPM= 3.19 Transcript Type= NA
chr10	126905409	127452517	126905409	127452517	+	ENST00000280333.9@DOCK1	ENST00000280333.9	protein_coding	126905409,126970702,126977948,126981918,126987521,126990455,126996748,126998092,126999354,127000172,127008732,127012295,127018710,127023200,127024685,127026352,127031650,127032137,127037719,127042625,127043064,127052681,127061668,127106231,127110248,127125474,127127669,127248008,127257335,127339006,127343646,127354669,127362064,127373781,127374058,127380082,127381278,127384790,127403055,127404325,127409037,127409313,127410840,127415152,127418365,127419666,127425874,127433283,127439027,127444126,127447394,127451332	126905563,126970785,126977988,126981973,126987617,126990603,126996883,126998249,126999435,127000307,127008804,127012374,127018835,127023324,127024783,127026424,127031753,127032320,127037816,127042714,127043164,127052815,127061776,127106301,127110354,127125601,127127764,127248109,127257429,127339084,127343746,127354727,127362212,127373866,127374214,127380122,127381368,127384909,127403144,127404429,127409178,127409391,127410924,127415238,127418541,127419749,127426011,127433428,127439225,127444279,127447545,127452517	Gene ID= ENSG00000150760.12 TPM= 9.56 Transcript Type= protein_coding
chr10	126905414	126907881	126905414	126907881	+	transcript4989.chr10.nnic@NA	transcript4989.chr10.nnic	NA	126905414	126907881	Gene ID= novel_gene_chr10_4990 TPM= 8.5 Transcript Type= NA
chr10	127907134	128085853	127907134	128085853	+	transcript4993.chr10.nnic@PTPRE	transcript4993.chr10.nnic	protein_coding	127907134,127982274,128040875,128047390,128047764,128049530,128056123,128060939,128061679,128063083,128066075,128068123,128069692,128070301,128070808,128072138,128073337,128076603,128077617,128079560,128082832,128085073	127907309,127982296,128040990,128047489,128047837,128049666,128056213,128061015,128061715,128063180,128066194,128068286,128069827,128070450,128070901,128072214,128073471,128076728,128077783,128079695,128082940,128085853	Gene ID= ENSG00000132334.16 TPM= 3.19 Transcript Type= NA
chr10	127987279	128084156	127987279	128084156	+	transcript5001.chr10.nic@PTPRE	transcript5001.chr10.nic	protein_coding	127987279,128040875,128047390,128047764,128049530,128056123,128060939,128061679,128063083,128066075,128068123,128069692,128070301,128070808,128072138,128073337,128076603,128077617,128079560,128082832	127987395,128040990,128047489,128047837,128049666,128056213,128061015,128061715,128063180,128066194,128068286,128069827,128070450,128070901,128072214,128073471,128076728,128077783,128079695,128084156	Gene ID= ENSG00000132334.16 TPM= 6.37 Transcript Type= NA
chr10	128047570	128085855	128047570	128085855	+	ENST00000306042.9@PTPRE	ENST00000306042.9	protein_coding	128047570,128047764,128049530,128056123,128060939,128061679,128063083,128066075,128068123,128069692,128070301,128070808,128072138,128073337,128076603,128077617,128079560,128082832	128047683,128047837,128049666,128056213,128061015,128061715,128063180,128066194,128068286,128069827,128070450,128070901,128072214,128073471,128076728,128077783,128079695,128085855	Gene ID= ENSG00000132334.16 TPM= 6.37 Transcript Type= protein_coding
chr10	127907063	128056163	127907063	128056163	+	transcript5009.chr10.nnic@PTPRE	transcript5009.chr10.nnic	protein_coding	127907063,128040875,128047390,128047764,128049530,128056123	127907309,128040990,128047489,128047837,128049666,128056163	Gene ID= ENSG00000132334.16 TPM= 6.37 Transcript Type= NA
chr10	127907061	128085855	127907061	128085855	+	ENST00000254667.7@PTPRE	ENST00000254667.7	protein_coding	127907061,127982274,128040875,128047390,128047764,128049530,128056123,128060939,128061679,128063083,128066075,128068123,128069692,128070301,128070808,128072138,128073337,128076603,128077617,128079560,128082832	127907309,127982296,128040990,128047489,128047837,128049666,128056213,128061015,128061715,128063180,128066194,128068286,128069827,128070450,128070901,128072214,128073471,128076728,128077783,128079695,128085855	Gene ID= ENSG00000132334.16 TPM= 15.93 Transcript Type= protein_coding
chr10	127909168	127910919	127909168	127910919	+	transcript5018.chr10.nnic@NA	transcript5018.chr10.nnic	NA	127909168	127910919	Gene ID= novel_gene_chr10_5019 TPM= 3.19 Transcript Type= NA
chr10	127946921	127951087	127946921	127951087	+	transcript5014.chr10.nnic@NA	transcript5014.chr10.nnic	NA	127946921	127951087	Gene ID= novel_gene_chr10_5015 TPM= 3.19 Transcript Type= NA
chr10	127994141	127996974	127994141	127996974	+	transcript5016.chr10.nnic@NA	transcript5016.chr10.nnic	NA	127994141	127996974	Gene ID= novel_gene_chr10_5017 TPM= 5.31 Transcript Type= NA
chr10	129467184	129768007	129467184	129768007	+	ENST00000306010.7@MGMT	ENST00000306010.7	protein_coding	129467184,129536241,129707895,129759202,129766788	129467296,129536377,129708043,129759341,129768007	Gene ID= ENSG00000170430.9 TPM= 26.55 Transcript Type= protein_coding
chr10	130063900	130110817	130063900	130110817	-	ENST00000637128.1@LINC00959	ENST00000637128.1	protein_coding	130110704,130079737,130079566,130063900	130110817,130079901,130079628,130064383	Gene ID= ENSG00000237489.3 TPM= 1.06 Transcript Type= protein_coding
chr10	130136399	130179664	130136399	130179664	+	ENST00000331244.9@GLRX3	ENST00000331244.9	protein_coding	130136399,130145211,130159995,130160796,130166507,130166919,130169433,130171584,130174867,130174997,130179342	130136512,130145319,130160069,130160997,130166679,130166980,130169490,130171636,130174906,130175089,130179664	Gene ID= ENSG00000108010.11 TPM= 8.5 Transcript Type= protein_coding
chr10	130136399	130182881	130136399	130182881	+	ENST00000368644.5@GLRX3	ENST00000368644.5	protein_coding	130136399,130145211,130159995,130160796,130166507,130166919,130169433,130171584,130174867,130174997,130179342,130180113	130136512,130145319,130160069,130160997,130166679,130166980,130169490,130171636,130174906,130175089,130179420,130182881	Gene ID= ENSG00000108010.11 TPM= 3.19 Transcript Type= protein_coding
chr10	131900961	131956555	131900961	131956555	+	transcript5047.chr10.nic@PPP2R2D	transcript5047.chr10.nic	protein_coding	131900961,131901238,131934458,131934894,131940031,131940582,131943968,131945295,131947530,131955684	131901155,131901330,131934555,131935006,131940196,131940694,131944145,131945459,131947791,131956555	Gene ID= ENSG00000175470.18 TPM= 18.5 Transcript Type= NA
chr10	131901031	131956555	131901031	131956555	+	transcript5053.chr10.nnic@PPP2R2D	transcript5053.chr10.nnic	protein_coding	131901031,131901238,131934458,131938572,131940031,131940582,131943968,131945295,131947530,131955684	131901155,131901330,131934555,131938652,131940196,131940694,131944145,131945459,131947791,131956555	Gene ID= ENSG00000175470.18 TPM= 10.01 Transcript Type= NA
chr10	131900644	131959834	131900644	131959834	+	ENST00000455566.5@PPP2R2D	ENST00000455566.5	protein_coding	131900644,131901238,131934458,131940031,131940582,131943968,131945295,131947530,131955684	131901155,131901330,131934555,131940196,131940694,131944145,131945459,131947791,131959834	Gene ID= ENSG00000175470.18 TPM= 12.75 Transcript Type= protein_coding
chr10	131900961	131956555	131900961	131956555	+	transcript5059.chr10.nnic@PPP2R2D	transcript5059.chr10.nnic	protein_coding	131900961,131901238,131940031,131940582,131943968,131945295,131947530,131955684	131901155,131901330,131940196,131940694,131944145,131945459,131947791,131956555	Gene ID= ENSG00000175470.18 TPM= 15.32 Transcript Type= NA
chr10	131901031	131956555	131901031	131956555	+	ENST00000616467.4@PPP2R2D	ENST00000616467.4	protein_coding	131901031,131901238,131934458,131934894,131940031,131940582,131944095,131945295,131947530,131955684	131901155,131901330,131934555,131935006,131940196,131940694,131944145,131945459,131947791,131956555	Gene ID= ENSG00000175470.18 TPM= 7.17 Transcript Type= nonsense_mediated_decay
chr10	131966455	131982013	131966455	131982013	-	ENST00000368636.8@BNIP3	ENST00000368636.8	protein_coding	131981761,131973793,131973034,131970864,131970638,131966455	131982013,131973943,131973118,131970970,131970787,131968569	Gene ID= ENSG00000176171.11 TPM= 14.87 Transcript Type= protein_coding
chr10	132186900	132205776	132186900	132205776	+	ENST00000338492.8@DPYSL4	ENST00000338492.8	protein_coding	132186900,132190747,132192658,132194845,132196861,132197021,132198415,132198851,132200356,132200842,132201946,132202646,132203762,132204839	132187102,132190835,132192842,132195009,132196922,132197101,132198483,132198971,132200512,132200983,132202116,132202825,132203927,132205776	Gene ID= ENSG00000151640.12 TPM= 94.53 Transcript Type= protein_coding
chr10	132186897	132205776	132186897	132205776	+	transcript5074.chr10.nic@DPYSL4	transcript5074.chr10.nic	protein_coding	132186897,132190747,132192658,132194845,132196861,132197021,132198415,132198851,132200356,132200842,132201946,132203762,132204839	132187102,132190835,132192842,132195009,132196922,132197101,132198483,132198971,132200512,132200983,132202116,132203927,132205776	Gene ID= ENSG00000151640.12 TPM= 19.12 Transcript Type= NA
chr10	132207492	132307940	132207492	132307940	-	ENST00000298630.7@STK32C	ENST00000298630.7	protein_coding	132307572,132245900,132227977,132226795,132225747,132225527,132225233,132224407,132222861,132222641,132209034,132207492	132307940,132245955,132228128,132226968,132225784,132225616,132225336,132224523,132222986,132222772,132209101,132208151	Gene ID= ENSG00000165752.16 TPM= 2.12 Transcript Type= protein_coding
chr10	132397145	132417863	132397145	132417863	+	transcript5087.chr10.nnic@PWWP2B	transcript5087.chr10.nnic	protein_coding	132397145,132404626,132417061	132397298,132406289,132417863	Gene ID= ENSG00000171813.13 TPM= 5.31 Transcript Type= NA
chr10	132397168	132417863	132397168	132417863	+	ENST00000305233.5@PWWP2B	ENST00000305233.5	protein_coding	132397168,132404626,132417061	132397351,132406289,132417863	Gene ID= ENSG00000171813.13 TPM= 53.11 Transcript Type= protein_coding
chr10	132503380	132506860	132503380	132506860	-	transcript5092.chr10.nnic@NA	transcript5092.chr10.nnic	NA	132505511,132503380	132506860,132505478	Gene ID= novel_gene_chr10_5093 TPM= 18.06 Transcript Type= NA
chr10	132508403	132518260	132508403	132518260	-	transcript5090.chr10.nnic@AL451069.1	transcript5090.chr10.nnic	lincRNA	132518117,132511558,132508403	132518260,132512161,132508929	Gene ID= ENSG00000226900.1 TPM= 3.19 Transcript Type= NA
chr10	132511623	132516917	132511623	132516917	-	transcript5095.chr10.nnic@AL451069.1	transcript5095.chr10.nnic	lincRNA	132516887,132511623	132516917,132512161	Gene ID= ENSG00000226900.1 TPM= 2.12 Transcript Type= NA
chr10	132511626	132518191	132511626	132518191	-	ENST00000455414.1@AL451069.1	ENST00000455414.1	lincRNA	132518094,132511626	132518191,132512161	Gene ID= ENSG00000226900.1 TPM= 6.37 Transcript Type= lincRNA
chr10	132515572	132521102	132515572	132521102	-	transcript5100.chr10.nnic@NA	transcript5100.chr10.nnic	NA	132515572	132521102	Gene ID= novel_gene_chr10_5101 TPM= 5.31 Transcript Type= NA
chr10	132537756	132727349	132537756	132727349	+	transcript5118.chr10.nic@INPP5A	transcript5118.chr10.nic	protein_coding	132537756,132607915,132645868,132650418,132690392,132697816,132708313,132710337,132726821	132538171,132607956,132645968,132650505,132690455,132697919,132708365,132710456,132727349	Gene ID= ENSG00000068383.18 TPM= 9.56 Transcript Type= NA
chr10	132537820	132783480	132537820	132783480	+	ENST00000368594.7@INPP5A	ENST00000368594.7	protein_coding	132537820,132607915,132645868,132650418,132690392,132697816,132708313,132710337,132726821,132749517,132749771,132765773,132777671,132780849,132781861,132782037	132538171,132607956,132645968,132650505,132690455,132697919,132708365,132710456,132726905,132749612,132749845,132765846,132777782,132780917,132781948,132783480	Gene ID= ENSG00000068383.18 TPM= 258.37 Transcript Type= protein_coding
chr10	132561398	132563661	132561398	132563661	+	transcript5128.chr10.nnic@NA	transcript5128.chr10.nnic	NA	132561398	132563661	Gene ID= novel_gene_chr10_5129 TPM= 2.12 Transcript Type= NA
chr10	132582417	132586998	132582417	132586998	-	transcript5140.chr10.nnic@NA	transcript5140.chr10.nnic	NA	132582417	132586998	Gene ID= novel_gene_chr10_5141 TPM= 2.12 Transcript Type= NA
chr10	132621786	132624816	132621786	132624816	-	transcript5134.chr10.nnic@NA	transcript5134.chr10.nnic	NA	132621786	132624816	Gene ID= novel_gene_chr10_5135 TPM= 3.19 Transcript Type= NA
chr10	132651396	132653626	132651396	132653626	+	transcript5130.chr10.nnic@NA	transcript5130.chr10.nnic	NA	132651396	132653626	Gene ID= novel_gene_chr10_5131 TPM= 2.12 Transcript Type= NA
chr10	132657575	132666068	132657575	132666068	+	transcript5124.chr10.nnic@NA	transcript5124.chr10.nnic	NA	132657575	132666068	Gene ID= novel_gene_chr10_5125 TPM= 4.25 Transcript Type= NA
chr10	132685697	132689624	132685697	132689624	+	transcript5126.chr10.nnic@NA	transcript5126.chr10.nnic	NA	132685697	132689624	Gene ID= novel_gene_chr10_5127 TPM= 2.12 Transcript Type= NA
chr10	132778304	132780816	132778304	132780816	-	transcript5138.chr10.nnic@NA	transcript5138.chr10.nnic	NA	132778304	132780816	Gene ID= novel_gene_chr10_5139 TPM= 16.99 Transcript Type= NA
chr10	132779824	132783476	132779824	132783476	+	transcript5132.chr10.nnic@NA	transcript5132.chr10.nnic	NA	132779824	132783476	Gene ID= novel_gene_chr10_5133 TPM= 2.39 Transcript Type= NA
chr10	132937115	132942543	132937115	132942543	-	ENST00000475340.1@CFAP46	ENST00000475340.1	protein_coding	132942436,132941980,132941591,132940996,132938589,132937115	132942543,132942104,132941722,132941060,132938753,132937675	Gene ID= ENSG00000171811.13 TPM= 1.06 Transcript Type= retained_intron
chr10	133278630	133309156	133278630	133309156	-	ENST00000368563.6@TUBGCP2	ENST00000368563.6	protein_coding	133308823,133302792,133299985,133299427,133297952,133293562,133293039,133292499,133289824,133288840,133288129,133285456,133285085,133283882,133283078,133282223,133281273,133278630	133309156,133302980,133300113,133299603,133298111,133293769,133293238,133292688,133289969,133289020,133288309,133285628,133285213,133284002,133283221,133282342,133281436,133279901	Gene ID= ENSG00000130640.13 TPM= 67.98 Transcript Type= protein_coding
chr10	133301701	133308848	133301701	133308848	-	ENST00000480198.1@TUBGCP2	ENST00000480198.1	protein_coding	133308823,133301701	133308848,133302980	Gene ID= ENSG00000130640.13 TPM= 1.06 Transcript Type= retained_intron
chr10	133308475	133313158	133308475	133313158	+	ENST00000361518.9@ZNF511	ENST00000361518.9	protein_coding	133308475,133309390,133309776,133310164,133311716,133312788	133309096,133309463,133309977,133310288,133311841,133313158	Gene ID= ENSG00000198546.14 TPM= 47.27 Transcript Type= protein_coding
chr10	133308941	133313162	133308941	133313162	+	ENST00000359035.4@ZNF511	ENST00000359035.4	protein_coding	133308941,133309390,133309776,133310164,133311716	133309096,133309463,133309977,133310288,133313162	Gene ID= ENSG00000198546.14 TPM= 12.21 Transcript Type= protein_coding
chr10	133355154	133358035	133355154	133358035	-	ENST00000278025.8@FUOM	ENST00000278025.8	protein_coding	133357923,133357187,133356943,133356640,133355738,133355154	133358035,133357255,133357013,133356738,133355811,133355436	Gene ID= ENSG00000148803.11 TPM= 2.12 Transcript Type= protein_coding
chr10	133355166	133358019	133355166	133358019	-	transcript5165.chr10.nic@FUOM	transcript5165.chr10.nic	protein_coding	133357923,133357187,133356943,133355166	133358019,133357255,133357013,133356738	Gene ID= ENSG00000148803.11 TPM= 2.12 Transcript Type= NA
chr10	133362480	133373689	133362480	133373689	-	ENST00000368547.3@ECHS1	ENST00000368547.3	protein_coding	133373246,133370560,133369904,133368923,133366889,133365976,133364658,133362480	133373689,133370757,133370031,133369022,133366993,133366095,133364725,133362933	Gene ID= ENSG00000127884.4 TPM= 709.61 Transcript Type= protein_coding
chr10	133379234	133391694	133379234	133391694	+	ENST00000278060.9@PAOX	ENST00000278060.9	protein_coding	133379234,133379999,133381460,133383960,133388956,133389590,133391312	133379497,133380485,133381659,133384212,133389068,133389747,133391694	Gene ID= ENSG00000148832.15 TPM= 5.31 Transcript Type= protein_coding
chr10	133394094	133420464	133394094	133420464	+	ENST00000477902.6@MTG1	ENST00000477902.6	protein_coding	133394094,133395713,133396163,133398435,133399170,133399529,133401529,133402149,133402692,133419480,133420026	133394184,133395777,133396267,133398515,133399226,133399619,133401590,133402245,133402773,133419592,133420464	Gene ID= ENSG00000148824.18 TPM= 1.06 Transcript Type= protein_coding
chr10	133394171	133420670	133394171	133420670	+	ENST00000317502.10@MTG1	ENST00000317502.10	protein_coding	133394171,133395713,133396163,133398435,133399170,133399529,133401529,133402149,133402692,133419480,133420026	133394332,133395777,133396267,133398515,133399226,133399619,133401590,133402245,133402773,133419592,133420670	Gene ID= ENSG00000148824.18 TPM= 4.25 Transcript Type= protein_coding
chr10	133404131	133405503	133404131	133405503	-	transcript5198.chr10.nnic@NA	transcript5198.chr10.nnic	NA	133404131	133405503	Gene ID= novel_gene_chr10_5199 TPM= 22.31 Transcript Type= NA
chr10	133412892	133416886	133412892	133416886	+	transcript5196.chr10.nnic@NA	transcript5196.chr10.nnic	NA	133412892	133416886	Gene ID= novel_gene_chr10_5197 TPM= 6.37 Transcript Type= NA
chr11	202926	207428	202926	207428	-	ENST00000382762.7@BET1L	ENST00000382762.7	protein_coding	207303,205952,205611,202926	207428,206043,205667,205469	Gene ID= ENSG00000177951.17 TPM= 36.11 Transcript Type= protein_coding
chr11	201434	203555	201434	203555	-	transcript6.chr11.nnic@NA	transcript6.chr11.nnic	NA	201434	203555	Gene ID= novel_gene_chr11_7 TPM= 3.19 Transcript Type= NA
chr11	206792	207269	206792	207269	-	transcript8.chr11.nnic@NA	transcript8.chr11.nnic	NA	206792	207269	Gene ID= novel_gene_chr11_9 TPM= 2.12 Transcript Type= NA
chr11	208793	215113	208793	215113	+	transcript13.chr11.nic@RIC8A	transcript13.chr11.nic	protein_coding	208793,209271,209407,210571,211199,212416,212615,212837,213299,214288	208938,209318,210000,210662,211349,212511,212759,212981,213418,215113	Gene ID= ENSG00000177963.14 TPM= 3.66 Transcript Type= NA
chr11	207984	215113	207984	215113	+	transcript14.chr11.nic@RIC8A	transcript14.chr11.nic	protein_coding	207984,209175,209407,210571,211199,212416,212615,212837,213299,214230	208938,209318,210000,210662,211349,212511,212759,212981,213418,215113	Gene ID= ENSG00000177963.14 TPM= 17.74 Transcript Type= NA
chr11	208782	215113	208782	215113	+	transcript15.chr11.nic@RIC8A	transcript15.chr11.nic	protein_coding	208782,209271,209407,210571,211199,212416,212615,213299,214230	208938,209318,210000,210662,211349,212511,212981,213418,215113	Gene ID= ENSG00000177963.14 TPM= 4.2 Transcript Type= NA
chr11	207511	215113	207511	215113	+	ENST00000526104.5@RIC8A	ENST00000526104.5	protein_coding	207511,209271,209407,210571,211199,212416,212615,212837,213299,214230	208938,209318,210000,210662,211349,212511,212759,212981,213418,215113	Gene ID= ENSG00000177963.14 TPM= 107.23 Transcript Type= protein_coding
chr11	215427	236380	215427	236380	-	transcript24.chr11.nic@SIRT3	transcript24.chr11.nic	protein_coding	236048,233343,232983,230452,224078,218778,215427	236380,233534,233215,230552,224239,219041,216718	Gene ID= ENSG00000142082.14 TPM= 9.56 Transcript Type= NA
chr11	215458	236431	215458	236431	-	ENST00000382743.8@SIRT3	ENST00000382743.8	protein_coding	236048,233343,232983,230452,224078,218832,215458	236431,233534,233215,230552,224239,219041,216718	Gene ID= ENSG00000142082.14 TPM= 13.81 Transcript Type= protein_coding
chr11	216179	236370	216179	236370	-	transcript35.chr11.nic@SIRT3	transcript35.chr11.nic	protein_coding	236048,232983,230452,224078,218832,216179	236370,233215,230552,224239,219041,216718	Gene ID= ENSG00000142082.14 TPM= 3.19 Transcript Type= NA
chr11	236977	252981	236977	252981	+	ENST00000431206.6@PSMD13	ENST00000431206.6	protein_coding	236977,244041,244426,244675,247277,248776,248932,250803,251546,251820,252505	237144,244216,244469,244761,247448,248855,249057,250865,251626,251936,252981	Gene ID= ENSG00000185627.17 TPM= 9.03 Transcript Type= protein_coding
chr11	307927	309392	307927	309392	+	ENST00000616316.1@IFITM2	ENST00000616316.1	protein_coding	307927,309013	308438,309392	Gene ID= ENSG00000185201.16 TPM= 92.94 Transcript Type= protein_coding
chr11	308117	309398	308117	309398	+	transcript59.chr11.nnic@NA	transcript59.chr11.nnic	NA	308117	309398	Gene ID= novel_gene_chr11_60 TPM= 29.21 Transcript Type= NA
chr11	309532	311162	309532	311162	-	transcript61.chr11.nnic@NA	transcript61.chr11.nnic	NA	309532	311162	Gene ID= novel_gene_chr11_62 TPM= 2.12 Transcript Type= NA
chr11	313853	315272	313853	315272	+	ENST00000408968.3@IFITM1	ENST00000408968.3	protein_coding	313853,314922	314356,315272	Gene ID= ENSG00000185885.15 TPM= 240.05 Transcript Type= protein_coding
chr11	314062	316986	314062	316986	+	transcript57.chr11.nnic@NA	transcript57.chr11.nnic	NA	314062	316986	Gene ID= novel_gene_chr11_58 TPM= 3.19 Transcript Type= NA
chr11	319669	321050	319669	321050	-	ENST00000399808.4@IFITM3	ENST00000399808.4	protein_coding	320565,319669	321050,319990	Gene ID= ENSG00000142089.15 TPM= 520.46 Transcript Type= protein_coding
chr11	319673	320830	319673	320830	-	transcript63.chr11.nnic@NA	transcript63.chr11.nnic	NA	319673	320830	Gene ID= novel_gene_chr11_64 TPM= 36.11 Transcript Type= NA
chr11	394217	404908	394217	404908	+	ENST00000331563.6@PKP3	ENST00000331563.6	protein_coding	394217,396608,396814,397539,398992,399967,400334,400535,403078,403618,403943,404236,404534	394524,396687,397445,397662,399196,400141,400451,400705,403263,403771,404135,404323,404908	Gene ID= ENSG00000184363.9 TPM= 1.06 Transcript Type= protein_coding
chr11	405716	407218	405716	407218	-	transcript72.chr11.nic@SIGIRR	transcript72.chr11.nic	protein_coding	406843,406349,405716	407218,406538,406059	Gene ID= ENSG00000185187.12 TPM= 7.44 Transcript Type= NA
chr11	405716	407135	405716	407135	-	ENST00000526395.5@SIGIRR	ENST00000526395.5	protein_coding	407062,406349,405716	407135,406538,406059	Gene ID= ENSG00000185187.12 TPM= 11.68 Transcript Type= protein_coding
chr11	405716	414976	405716	414976	-	ENST00000431843.6@SIGIRR	ENST00000431843.6	protein_coding	414823,409868,408695,408073,407817,407425,407062,406843,406349,405716	414976,410027,408893,408206,407957,407568,407164,406993,406538,406059	Gene ID= ENSG00000185187.12 TPM= 8.5 Transcript Type= protein_coding
chr11	450264	491399	450264	491399	+	transcript75.chr11.nic@PTDSS2	transcript75.chr11.nic	protein_coding	450264,460187,473895,479085,486939,487420,488199,488529,489400,489588,489883,490420,491121	450637,460288,473977,479152,487073,487470,488312,488647,489514,489733,490068,490642,491399	Gene ID= ENSG00000174915.11 TPM= 6.37 Transcript Type= NA
chr11	450420	475885	450420	475885	+	transcript86.chr11.nic@PTDSS2	transcript86.chr11.nic	protein_coding	450420,460187,473895	450637,460288,475885	Gene ID= ENSG00000174915.11 TPM= 2.12 Transcript Type= NA
chr11	450280	491387	450280	491387	+	ENST00000308020.5@PTDSS2	ENST00000308020.5	protein_coding	450280,460187,473895,479085,486939,487420,488199,488529,489400,489588,489883,490420	450637,460288,473977,479152,487073,487470,488312,488647,489514,489733,490068,491387	Gene ID= ENSG00000174915.11 TPM= 41.42 Transcript Type= protein_coding
chr11	482225	486667	482225	486667	-	transcript88.chr11.nnic@NA	transcript88.chr11.nnic	NA	482225	486667	Gene ID= novel_gene_chr11_89 TPM= 7.44 Transcript Type= NA
chr11	494515	504674	494515	504674	-	transcript103.chr11.nic@RNH1	transcript103.chr11.nic	protein_coding	504427,502062,500484,499829,499015,498763,498457,497971,494883,494515	504674,502181,500654,499999,499185,498933,498627,498141,495053,494778	Gene ID= ENSG00000023191.16 TPM= 20.96 Transcript Type= NA
chr11	494515	504502	494515	504502	-	transcript106.chr11.nnic@RNH1	transcript106.chr11.nnic	protein_coding	504427,502062,500484,499829,499015,498763,498457,497971,494883,494515	504502,502249,500654,499999,499185,498933,498627,498141,495053,494778	Gene ID= ENSG00000023191.16 TPM= 57.78 Transcript Type= NA
chr11	494513	506821	494513	506821	-	ENST00000397614.5@RNH1	ENST00000397614.5	protein_coding	506609,502062,500484,499829,499015,498763,498457,497971,494883,494513	506821,502249,500654,499999,499185,498933,498627,498141,495053,494778	Gene ID= ENSG00000023191.16 TPM= 34.41 Transcript Type= protein_coding
chr11	494515	507253	494515	507253	-	ENST00000397604.7@RNH1	ENST00000397604.7	protein_coding	507113,502062,500484,499829,499015,498763,498457,497971,494883,494515	507253,502181,500654,499999,499185,498933,498627,498141,495053,494778	Gene ID= ENSG00000023191.16 TPM= 168.6 Transcript Type= protein_coding
chr11	494548	506785	494548	506785	-	ENST00000438658.6@RNH1	ENST00000438658.6	protein_coding	506609,502062,500484,499829,499015,498763,498457,497971,494883,494548	506785,502181,500654,499999,499185,498933,498627,498141,495053,494778	Gene ID= ENSG00000023191.16 TPM= 12.82 Transcript Type= protein_coding
chr11	494561	507300	494561	507300	-	ENST00000356187.9@RNH1	ENST00000356187.9	protein_coding	507113,502062,500484,499829,499015,498763,498457,497971,494883,494561	507300,502249,500654,499999,499185,498933,498627,498141,495053,494778	Gene ID= ENSG00000023191.16 TPM= 197.64 Transcript Type= protein_coding
chr11	494515	506800	494515	506800	-	ENST00000397615.6@RNH1	ENST00000397615.6	protein_coding	506609,504824,502062,500484,499829,499015,498763,498457,497971,494883,494515	506800,504996,502249,500654,499999,499185,498933,498627,498141,495053,494778	Gene ID= ENSG00000023191.16 TPM= 99.21 Transcript Type= protein_coding
chr11	494552	507221	494552	507221	-	ENST00000354420.6@RNH1	ENST00000354420.6	protein_coding	507113,504824,502062,500484,499829,499015,498763,498457,497971,494883,494552	507221,504996,502249,500654,499999,499185,498933,498627,498141,495053,494778	Gene ID= ENSG00000023191.16 TPM= 8.57 Transcript Type= protein_coding
chr11	494546	507218	494546	507218	-	ENST00000533410.5@RNH1	ENST00000533410.5	protein_coding	507113,504824,502062,500484,499829,499015,498763,498457,497971,494883,494546	507218,504996,502181,500654,499999,499185,498933,498627,498141,495053,494778	Gene ID= ENSG00000023191.16 TPM= 21.32 Transcript Type= protein_coding
chr11	532243	535550	532243	535550	-	ENST00000451590.5@HRAS	ENST00000451590.5	protein_coding	535416,534212,533766,533453,532243	535550,534375,533944,533612,532755	Gene ID= ENSG00000174775.16 TPM= 6.37 Transcript Type= protein_coding
chr11	532243	535550	532243	535550	-	ENST00000417302.5@HRAS	ENST00000417302.5	protein_coding	535416,534212,533766,533453,533277,532243	535550,534375,533944,533612,533358,532755	Gene ID= ENSG00000174775.16 TPM= 2.12 Transcript Type= protein_coding
chr11	532242	535538	532242	535538	-	ENST00000493230.5@HRAS	ENST00000493230.5	protein_coding	535416,534212,533766,533453,533277,532631,532242	535538,534375,533944,533612,533358,532755,532522	Gene ID= ENSG00000174775.16 TPM= 2.12 Transcript Type= nonsense_mediated_decay
chr11	560956	564012	560956	564012	+	ENST00000397582.7@RASSF7	ENST00000397582.7	protein_coding	560956,561762,562079,563189	561033,561892,562776,564012	Gene ID= ENSG00000099849.14 TPM= 6.37 Transcript Type= protein_coding
chr11	565660	568420	565660	568420	-	ENST00000500447.1@MIR210HG	ENST00000500447.1	lincRNA	568352,565660	568420,567555	Gene ID= ENSG00000247095.2 TPM= 3.19 Transcript Type= lincRNA
chr11	567016	568466	567016	568466	-	transcript159.chr11.nnic@NA	transcript159.chr11.nnic	NA	567016	568466	Gene ID= novel_gene_chr11_160 TPM= 2.12 Transcript Type= NA
chr11	607665	612043	607665	612043	+	transcript149.chr11.nic@PHRF1	transcript149.chr11.nic	protein_coding	607665,610954,611634	610761,611082,612043	Gene ID= ENSG00000070047.11 TPM= 10.62 Transcript Type= NA
chr11	612559	615999	612559	615999	-	ENST00000397574.6@IRF7	ENST00000397574.6	protein_coding	615913,615345,615097,614797,614476,614174,613951,613785,613206,612999,612559	615999,615647,615259,615007,614534,614399,614037,613865,613595,613117,612800	Gene ID= ENSG00000185507.19 TPM= 6.72 Transcript Type= protein_coding
chr11	612555	615950	612555	615950	-	transcript134.chr11.nic@IRF7	transcript134.chr11.nic	protein_coding	615913,615345,615097,614797,614476,613951,613785,613206,612999,612555	615950,615647,615259,615007,614534,614037,613865,613595,613117,612800	Gene ID= ENSG00000185507.19 TPM= 6.72 Transcript Type= NA
chr11	612591	615970	612591	615970	-	ENST00000330243.9@IRF7	ENST00000330243.9	protein_coding	615913,615097,614797,614476,614174,613951,613785,613206,612999,612591	615970,615647,615007,614534,614399,614037,613865,613595,613117,612800	Gene ID= ENSG00000185507.19 TPM= 1.41 Transcript Type= protein_coding
chr11	644231	644788	644231	644788	-	transcript186.chr11.nnic@NA	transcript186.chr11.nnic	NA	644231	644788	Gene ID= novel_gene_chr11_187 TPM= 2.12 Transcript Type= NA
chr11	674372	695747	674372	695747	-	transcript174.chr11.nic@DEAF1	transcript174.chr11.nic	protein_coding	694759,691501,688331,687911,686858,684898,680963,679688,678694,674372	695747,691598,688460,688057,686997,684963,681089,679816,678822,674783	Gene ID= ENSG00000177030.16 TPM= 4.25 Transcript Type= NA
chr11	649279	650397	649279	650397	+	transcript184.chr11.nnic@NA	transcript184.chr11.nnic	NA	649279	650397	Gene ID= novel_gene_chr11_185 TPM= 9.56 Transcript Type= NA
chr11	656867	660588	656867	660588	-	transcript188.chr11.nnic@NA	transcript188.chr11.nnic	NA	656867	660588	Gene ID= novel_gene_chr11_189 TPM= 2.12 Transcript Type= NA
chr11	695014	704129	695014	704129	+	transcript175.chr11.nic@TMEM80	transcript175.chr11.nic	protein_coding	695014,698869,700142,700615,702945,703800	695846,698888,700235,700707,703146,704129	Gene ID= ENSG00000177042.14 TPM= 15.93 Transcript Type= NA
chr11	695816	699762	695816	699762	+	transcript181.chr11.nic@TMEM80	transcript181.chr11.nic	protein_coding	695816,698869	695846,699762	Gene ID= ENSG00000177042.14 TPM= 4.25 Transcript Type= NA
chr11	695804	696449	695804	696449	+	transcript182.chr11.nnic@NA	transcript182.chr11.nnic	NA	695804	696449	Gene ID= novel_gene_chr11_183 TPM= 7.44 Transcript Type= NA
chr11	701408	703544	701408	703544	-	transcript190.chr11.nnic@NA	transcript190.chr11.nnic	NA	701408	703544	Gene ID= novel_gene_chr11_191 TPM= 13.81 Transcript Type= NA
chr11	747329	765024	747329	765024	+	ENST00000319006.7@TALDO1	ENST00000319006.7	protein_coding	747329,755879,758950,760122,763344,763747,764288,764813	747578,756002,759057,760253,763519,763944,764433,765024	Gene ID= ENSG00000177156.10 TPM= 179.51 Transcript Type= protein_coding
chr11	778862	781739	778862	781739	-	transcript209.chr11.nnic@NA	transcript209.chr11.nnic	NA	778862	781739	Gene ID= novel_gene_chr11_210 TPM= 3.19 Transcript Type= NA
chr11	790475	798333	790475	798333	-	ENST00000628067.2@SLC25A22	ENST00000628067.2	protein_coding	798217,794987,794776,794458,793529,792870,792553,792304,792142,790475	798333,795169,794901,794513,793619,792988,792727,792458,792217,792068	Gene ID= ENSG00000177542.10 TPM= 7.44 Transcript Type= protein_coding
chr11	796992	799190	796992	799190	+	transcript222.chr11.nnic@NA	transcript222.chr11.nnic	NA	796992	799190	Gene ID= novel_gene_chr11_223 TPM= 2.12 Transcript Type= NA
chr11	799184	809550	799184	809550	-	transcript211.chr11.nnic@PIDD1	transcript211.chr11.nnic	protein_coding	809412,805954,804094,803174,802682,802543,802195,801965,801445,801218,800985,800762,800543,800333,800131,799815,799184	809550,806095,804463,803587,802891,802597,802396,802090,801624,801365,801120,800912,800666,800451,800244,800014,799565	Gene ID= ENSG00000177595.17 TPM= 12.21 Transcript Type= NA
chr11	799184	809550	799184	809550	-	transcript212.chr11.nnic@PIDD1	transcript212.chr11.nnic	protein_coding	809412,805954,804094,803174,802682,802543,802195,801965,801445,801218,801002,800762,800543,800333,800131,799815,799184	809550,806095,804463,803647,802891,802597,802376,802090,801624,801365,801120,800912,800666,800451,800244,800014,799565	Gene ID= ENSG00000177595.17 TPM= 4.78 Transcript Type= NA
chr11	809647	812875	809647	812875	+	ENST00000321153.8@RPLP2	ENST00000321153.8	protein_coding	809647,810234,811597,812535,812760	810039,810357,811645,812633,812875	Gene ID= ENSG00000177600.8 TPM= 223.58 Transcript Type= protein_coding
chr11	810269	812871	810269	812871	+	ENST00000530398.1@RPLP2	ENST00000530398.1	protein_coding	810269,811597,812535,812760	810321,811645,812633,812871	Gene ID= ENSG00000177600.8 TPM= 7.97 Transcript Type= protein_coding
chr11	809984	812874	809984	812874	+	ENST00000530797.5@RPLP2	ENST00000530797.5	protein_coding	809984,811597,812535,812760	810357,811645,812633,812874	Gene ID= ENSG00000177600.8 TPM= 25.49 Transcript Type= protein_coding
chr11	819520	825218	819520	825218	+	transcript227.chr11.nic@PNPLA2	transcript227.chr11.nic	protein_coding	819520,821628,821958,822397,823527,823694,823998,824314,824523	819905,821860,822023,822606,823587,823855,824130,824436,825218	Gene ID= ENSG00000177666.16 TPM= 149.76 Transcript Type= NA
chr11	823543	825218	823543	825218	+	ENST00000529255.1@PNPLA2	ENST00000529255.1	protein_coding	823543,823694,824314,824523	823587,824130,824436,825218	Gene ID= ENSG00000177666.16 TPM= 95.59 Transcript Type= retained_intron
chr11	827155	831986	827155	831986	+	transcript232.chr11.nic@CRACR2B	transcript232.chr11.nic	protein_coding	827155,828230,828852,829360,829986,830250,830621,830866,831224,831535	827459,828772,828963,829540,830132,830337,830713,831032,831295,831986	Gene ID= ENSG00000177685.16 TPM= 6.94 Transcript Type= NA
chr11	827114	831986	827114	831986	+	transcript237.chr11.nnic@CRACR2B	transcript237.chr11.nnic	protein_coding	827114,828230,828852,829360,829986,830250,830621,830866,831224,831535	827318,828772,828963,829540,830132,830337,830713,831032,831295,831986	Gene ID= ENSG00000177685.16 TPM= 2.69 Transcript Type= NA
chr11	827004	831986	827004	831986	+	transcript238.chr11.nic@CRACR2B	transcript238.chr11.nic	protein_coding	827004,828260,828852,829360,829986,830250,830621,830866,831535	827318,828772,828963,829540,830132,830337,830713,831295,831986	Gene ID= ENSG00000177685.16 TPM= 3.4 Transcript Type= NA
chr11	827141	831986	827141	831986	+	transcript239.chr11.nic@CRACR2B	transcript239.chr11.nic	protein_coding	827141,828230,828852,829360,829986,830250,830621,830866,831535	827459,828772,828963,829540,830132,830337,830713,831295,831986	Gene ID= ENSG00000177685.16 TPM= 3.4 Transcript Type= NA
chr11	832952	838834	832952	838834	+	ENST00000397421.5@CD151	ENST00000397421.5	protein_coding	832952,836063,836251,836769,837250,837460,837942,838133	833026,836153,836442,836843,837354,837618,838028,838834	Gene ID= ENSG00000177697.17 TPM= 251.32 Transcript Type= protein_coding
chr11	832952	838834	832952	838834	+	ENST00000322008.8@CD151	ENST00000322008.8	protein_coding	832952,834530,836063,836251,836769,837250,837460,837942,838133	833026,834591,836153,836442,836843,837354,837618,838028,838834	Gene ID= ENSG00000177697.17 TPM= 624.35 Transcript Type= protein_coding
chr11	833009	838831	833009	838831	+	ENST00000530726.5@CD151	ENST00000530726.5	protein_coding	833009,834530,836063,836251,836769,837250,837460,837942,838133,838445	833022,834591,836153,836442,836843,837354,837618,838028,838367,838831	Gene ID= ENSG00000177697.17 TPM= 4.97 Transcript Type= nonsense_mediated_decay
chr11	834527	838835	834527	838835	+	ENST00000532045.5@CD151	ENST00000532045.5	protein_coding	834527,836063,836251,837250,837460,837942,838133	834591,836153,836843,837354,837618,838028,838835	Gene ID= ENSG00000177697.17 TPM= 22.1 Transcript Type= retained_intron
chr11	839721	842545	839721	842545	-	ENST00000322028.4@POLR2L	ENST00000322028.4	protein_coding	842414,839721	842545,840480	Gene ID= ENSG00000177700.5 TPM= 6.37 Transcript Type= protein_coding
chr11	842808	867111	842808	867111	+	ENST00000397397.6@TSPAN4	ENST00000397397.6	protein_coding	842808,847201,850288,862550,864437,865513,865694,865918,866562	842915,847300,850367,862741,864511,865614,865825,866001,867111	Gene ID= ENSG00000214063.10 TPM= 30.97 Transcript Type= protein_coding
chr11	842900	867111	842900	867111	+	transcript295.chr11.nnic@TSPAN4	transcript295.chr11.nnic	protein_coding	842900,847201,850288,862550,864437,865513,865694,865918,866562	843045,847300,850367,862741,864511,865614,865825,866001,867111	Gene ID= ENSG00000214063.10 TPM= 5.48 Transcript Type= NA
chr11	842836	867111	842836	867111	+	transcript299.chr11.nic@TSPAN4	transcript299.chr11.nic	protein_coding	842836,847201,850288,862550,864437,865513,865918,866562	842915,847300,850367,862741,864511,865825,866001,867111	Gene ID= ENSG00000214063.10 TPM= 9.46 Transcript Type= NA
chr11	842836	867111	842836	867111	+	transcript300.chr11.nic@TSPAN4	transcript300.chr11.nic	protein_coding	842836,847201,850288,862550,864437,865694,865918,866562	842915,847300,850367,862741,864511,865825,866001,867111	Gene ID= ENSG00000214063.10 TPM= 4.68 Transcript Type= NA
chr11	842824	867116	842824	867116	+	ENST00000397396.5@TSPAN4	ENST00000397396.5	protein_coding	842824,847201,862550,864437,865513,865694,865918,866562	842915,847300,862741,864511,865614,865825,866001,867116	Gene ID= ENSG00000214063.10 TPM= 1.5 Transcript Type= protein_coding
chr11	844127	867111	844127	867111	+	transcript303.chr11.nic@TSPAN4	transcript303.chr11.nic	protein_coding	844127,847201,850288,862550,864437,865513,865918,866562	844186,847300,850367,862741,864511,865825,866001,867111	Gene ID= ENSG00000214063.10 TPM= 3.85 Transcript Type= NA
chr11	842836	867111	842836	867111	+	transcript304.chr11.nic@TSPAN4	transcript304.chr11.nic	protein_coding	842836,847201,850288,862550,864437,865513,865918	842915,847300,850367,862741,864511,865825,867111	Gene ID= ENSG00000214063.10 TPM= 2.12 Transcript Type= NA
chr11	842941	867116	842941	867116	+	ENST00000397408.5@TSPAN4	ENST00000397408.5	protein_coding	842941,847201,850288,862550,864437,865513,865694,865918,866562	843050,847300,850367,862741,864511,865614,865825,866001,867116	Gene ID= ENSG00000214063.10 TPM= 5.48 Transcript Type= protein_coding
chr11	844081	867116	844081	867116	+	ENST00000397406.5@TSPAN4	ENST00000397406.5	protein_coding	844081,847201,850288,862550,864437,865513,865694,865918,866562	844186,847300,850367,862741,864511,865614,865825,866001,867116	Gene ID= ENSG00000214063.10 TPM= 11.85 Transcript Type= protein_coding
chr11	868396	911461	868396	911461	-	ENST00000323578.12@CHID1	ENST00000323578.12	protein_coding	910775,904706,902962,902198,900936,900004,899340,893427,884068,883148,870419,870121,868396	911461,904859,903111,902330,900980,900110,899401,893519,884169,883303,870499,870163,869956	Gene ID= ENSG00000177830.17 TPM= 4.78 Transcript Type= protein_coding
chr11	869762	910835	869762	910835	-	transcript283.chr11.nic@CHID1	transcript283.chr11.nic	protein_coding	910775,908542,904706,902962,902198,900936,900004,899340,884068,883148,870419,870121,869762	910835,908645,904859,903111,902330,900980,900110,899401,884169,883303,870499,870163,869956	Gene ID= ENSG00000177830.17 TPM= 3.54 Transcript Type= NA
chr11	880874	910874	880874	910874	-	transcript286.chr11.nnic@CHID1	transcript286.chr11.nnic	protein_coding	910775,904706,902962,902198,900936,900004,899340,893427,884068,883148,881340,880874	910874,904859,903111,902330,900980,900110,899401,893519,884169,883303,882515,881293	Gene ID= ENSG00000177830.17 TPM= 29.74 Transcript Type= NA
chr11	869767	910831	869767	910831	-	ENST00000436108.6@CHID1	ENST00000436108.6	protein_coding	910775,908542,904706,902962,902198,900936,900004,899340,893427,884068,883148,870419,870121,869767	910831,908645,904859,903111,902330,900980,900110,899401,893519,884169,883303,870499,870163,869956	Gene ID= ENSG00000177830.17 TPM= 34.87 Transcript Type= protein_coding
chr11	869762	910835	869762	910835	-	ENST00000429789.6@CHID1	ENST00000429789.6	protein_coding	910775,904706,902962,902198,900936,900004,899340,884068,883148,870419,870121,869762	910835,904859,903111,902330,900980,900110,899401,884169,883303,870499,870163,869956	Gene ID= ENSG00000177830.17 TPM= 4.6 Transcript Type= protein_coding
chr11	881341	882021	881341	882021	+	transcript309.chr11.nnic@NA	transcript309.chr11.nnic	NA	881341,881490	881418,882021	Gene ID= novel_gene_chr11_310 TPM= 3.72 Transcript Type= NA
chr11	892216	893848	892216	893848	+	transcript314.chr11.nnic@NA	transcript314.chr11.nnic	NA	892216	893848	Gene ID= novel_gene_chr11_315 TPM= 3.19 Transcript Type= NA
chr11	925809	1012245	925809	1012245	+	ENST00000332231.9@AP2A2	ENST00000332231.9	protein_coding	925809,959437,970169,972062,977095,981198,984645,985432,986785,988552,992503,993284,993754,994072,1000432,1003722,1006528,1008012,1009100,1009328,1009683,1010548	926088,959505,970311,972255,977224,981299,984753,985582,986953,988689,992685,993381,993985,994245,1000598,1003804,1006617,1008135,1009216,1009397,1009817,1012245	Gene ID= ENSG00000183020.13 TPM= 9.56 Transcript Type= protein_coding
chr11	925829	989350	925829	989350	+	transcript321.chr11.nic@AP2A2	transcript321.chr11.nic	protein_coding	925829,959437,970169,972062,977095,981198,984645,985432,986785,988552	926088,959505,970311,972255,977224,981299,984753,985582,986953,989350	Gene ID= ENSG00000183020.13 TPM= 3.19 Transcript Type= NA
chr11	925881	1012239	925881	1012239	+	ENST00000448903.6@AP2A2	ENST00000448903.6	protein_coding	925881,959437,970169,972062,977095,981198,984645,985435,986785,988552,992503,993284,993754,994072,1000432,1003722,1006528,1008012,1009100,1009328,1009683,1010548	926088,959505,970311,972255,977224,981299,984753,985582,986953,988689,992685,993381,993985,994245,1000598,1003804,1006617,1008135,1009216,1009397,1009817,1012239	Gene ID= ENSG00000183020.13 TPM= 6.37 Transcript Type= protein_coding
chr11	1298149	1309644	1298149	1309644	-	ENST00000527085.1@TOLLIP	ENST00000527085.1	protein_coding	1309466,1298149	1309644,1298564	Gene ID= ENSG00000078902.15 TPM= 1.06 Transcript Type= processed_transcript
chr11	1274371	1309622	1274371	1309622	-	ENST00000317204.10@TOLLIP	ENST00000317204.10	protein_coding	1309466,1295645,1290227,1288624,1286002,1274371	1309622,1295794,1290409,1288776,1286092,1277253	Gene ID= ENSG00000078902.15 TPM= 116.84 Transcript Type= protein_coding
chr11	1309769	1310707	1309769	1310707	+	ENST00000530897.1@TOLLIP-AS1	ENST00000530897.1	antisense_RNA	1309769	1310707	Gene ID= ENSG00000255153.1 TPM= 4.25 Transcript Type= antisense_RNA
chr11	1734821	1763954	1734821	1763954	-	ENST00000636615.1@AC068580.4	ENST00000636615.1	protein_coding	1763792,1761309,1759516,1758969,1757324,1754906,1753994,1753803,1747667,1734821	1763954,1761468,1759639,1759087,1757556,1755028,1754138,1753901,1748119,1735429	Gene ID= ENSG00000250644.3 TPM= 6.55 Transcript Type= protein_coding
chr11	1752752	1763992	1752752	1763992	-	ENST00000236671.6@CTSD	ENST00000236671.6	protein_coding	1763792,1761309,1759516,1758969,1757324,1754906,1753994,1753803,1752752	1763992,1761468,1759639,1759087,1757556,1755028,1754138,1753901,1753670	Gene ID= ENSG00000117984.13 TPM= 812.02 Transcript Type= protein_coding
chr11	1753313	1763948	1753313	1763948	-	ENST00000636843.1@CTSD	ENST00000636843.1	protein_coding	1763792,1761309,1759516,1758969,1757324,1754906,1753994,1753803,1753313	1763948,1761468,1759633,1759087,1757556,1755028,1754138,1753901,1753670	Gene ID= ENSG00000117984.13 TPM= 9.56 Transcript Type= protein_coding
chr11	1852970	1892263	1852970	1892263	+	ENST00000311604.7@LSP1	ENST00000311604.7	protein_coding	1852970,1880087,1881432,1883419,1883932,1884280,1884500,1886732,1887237,1887474,1891773	1853197,1880224,1881596,1883560,1884024,1884323,1884581,1886866,1887314,1887576,1892263	Gene ID= ENSG00000130592.15 TPM= 4.97 Transcript Type= protein_coding
chr11	1864148	1892263	1864148	1892263	+	transcript362.chr11.nic@LSP1	transcript362.chr11.nic	protein_coding	1864148,1880087,1881432,1883419,1883932,1884280,1884500,1886732,1887237,1887474,1891773	1864234,1880224,1881596,1883560,1884024,1884323,1884581,1886866,1887314,1887576,1892263	Gene ID= ENSG00000130592.15 TPM= 4.97 Transcript Type= NA
chr11	1868673	1892263	1868673	1892263	+	ENST00000405957.6@LSP1	ENST00000405957.6	protein_coding	1868673,1880087,1881432,1883419,1883932,1884280,1884500,1886732,1887237,1887474,1891773	1868986,1880224,1881596,1883560,1884024,1884323,1884581,1886866,1887314,1887576,1892263	Gene ID= ENSG00000130592.15 TPM= 8.16 Transcript Type= protein_coding
chr11	1870244	1892263	1870244	1892263	+	ENST00000406638.6@LSP1	ENST00000406638.6	protein_coding	1870244,1880087,1881432,1883419,1883932,1884280,1884500,1886732,1887237,1887474,1891773	1871412,1880224,1881596,1883560,1884024,1884323,1884581,1886866,1887314,1887576,1892263	Gene ID= ENSG00000130592.15 TPM= 11.08 Transcript Type= protein_coding
chr11	1875761	1892263	1875761	1892263	+	transcript370.chr11.nic@LSP1	transcript370.chr11.nic	protein_coding	1875761,1880087,1881432,1883419,1883932,1884280,1884500,1886732,1887237,1887474,1891773	1876645,1880224,1881596,1883560,1884024,1884323,1884581,1886866,1887314,1887576,1892263	Gene ID= ENSG00000130592.15 TPM= 4.71 Transcript Type= NA
chr11	1880446	1892263	1880446	1892263	+	transcript372.chr11.nic@LSP1	transcript372.chr11.nic	protein_coding	1880446,1883419,1883932,1884280,1884500,1886732,1887237,1887474,1891773	1881596,1883560,1884024,1884323,1884581,1886866,1887314,1887576,1892263	Gene ID= ENSG00000130592.15 TPM= 4.33 Transcript Type= NA
chr11	1888083	1917734	1888083	1917734	-	transcript373.chr11.nnic@AC051649.2	transcript373.chr11.nnic	protein_coding	1917639,1888083	1917734,1890593	Gene ID= ENSG00000283787.1 TPM= 4.25 Transcript Type= NA
chr11	1925366	1938701	1925366	1938701	+	transcript384.chr11.nic@TNNT3	transcript384.chr11.nic	protein_coding	1925366,1929810,1932469,1933721,1933931,1934332,1934546,1934829,1936963,1938438	1926481,1929828,1932514,1933837,1934008,1934445,1934655,1934919,1937003,1938701	Gene ID= ENSG00000130595.18 TPM= 7.08 Transcript Type= NA
chr11	1919562	1938706	1919562	1938706	+	ENST00000278317.10@TNNT3	ENST00000278317.10	protein_coding	1919562,1922857,1923048,1923555,1925099,1926695,1929120,1929810,1932469,1933721,1933931,1934332,1934546,1934829,1936963,1938438	1919762,1922891,1923061,1923572,1925116,1926709,1929143,1929828,1932514,1933837,1934008,1934445,1934655,1934919,1937003,1938706	Gene ID= ENSG00000130595.18 TPM= 5.49 Transcript Type= protein_coding
chr11	1919706	1938706	1919706	1938706	+	ENST00000381589.7@TNNT3	ENST00000381589.7	protein_coding	1919706,1922857,1923048,1923555,1925099,1925256,1926470,1929810,1932469,1933721,1933931,1934332,1934546,1934829,1936963,1938438	1919762,1922891,1923061,1923572,1925116,1925276,1926481,1929828,1932514,1933837,1934008,1934445,1934655,1934919,1937003,1938706	Gene ID= ENSG00000130595.18 TPM= 19.3 Transcript Type= protein_coding
chr11	1947278	1956609	1947278	1956609	+	ENST00000397298.7@MRPL23	ENST00000397298.7	protein_coding	1947278,1950899,1952127,1952782,1956256	1947379,1951021,1952209,1952855,1956609	Gene ID= ENSG00000214026.10 TPM= 126.4 Transcript Type= protein_coding
chr11	1947341	1962838	1947341	1962838	+	ENST00000381514.7@MRPL23	ENST00000381514.7	protein_coding	1947341,1950899,1952127,1952782,1962239	1947379,1951021,1952209,1952855,1962838	Gene ID= ENSG00000214026.10 TPM= 1.06 Transcript Type= protein_coding
chr11	1983788	1986373	1983788	1986373	+	transcript392.chr11.nnic@NA	transcript392.chr11.nnic	NA	1983788	1986373	Gene ID= novel_gene_chr11_393 TPM= 3.19 Transcript Type= NA
chr11	1995163	1997875	1995163	1997875	-	ENST00000414790.5@H19	ENST00000414790.5	processed_transcript	1996518,1996287,1996079,1995876,1995163	1997875,1996421,1996191,1995998,1995794	Gene ID= ENSG00000130600.17 TPM= 169.95 Transcript Type= lincRNA
chr11	1995179	1997744	1995179	1997744	-	transcript399.chr11.nnic@H19	transcript399.chr11.nnic	processed_transcript	1996518,1996287,1996079,1995179	1997744,1996421,1996191,1995794	Gene ID= ENSG00000130600.17 TPM= 21.77 Transcript Type= NA
chr11	1995176	1997217	1995176	1997217	-	ENST00000411861.5@H19	ENST00000411861.5	processed_transcript	1996518,1996287,1996079,1995176	1997217,1996421,1996191,1995998	Gene ID= ENSG00000130600.17 TPM= 12.21 Transcript Type= retained_intron
chr11	2129112	2139389	2129112	2139389	-	ENST00000416167.6@IGF2	ENST00000416167.6	protein_coding	2138229,2135367,2133517,2129112	2139389,2135529,2133665,2133223	Gene ID= ENSG00000167244.18 TPM= 280.41 Transcript Type= protein_coding
chr11	2129112	2137290	2129112	2137290	-	ENST00000381395.5@IGF2	ENST00000381395.5	protein_coding	2137188,2135367,2133517,2129112	2137290,2135529,2133665,2133223	Gene ID= ENSG00000167244.18 TPM= 274.04 Transcript Type= protein_coding
chr11	2268495	2270952	2268495	2270952	-	ENST00000331289.4@ASCL2	ENST00000331289.4	protein_coding	2269733,2268495	2270952,2269126	Gene ID= ENSG00000183734.4 TPM= 1.06 Transcript Type= protein_coding
chr11	2287594	2288163	2287594	2288163	+	transcript409.chr11.nnic@NA	transcript409.chr11.nnic	NA	2287594	2288163	Gene ID= novel_gene_chr11_410 TPM= 3.19 Transcript Type= NA
chr11	2295645	2302060	2295645	2302060	-	ENST00000381153.7@C11orf21	ENST00000381153.7	protein_coding	2301756,2300520,2299428,2295645	2302060,2300613,2299707,2297921	Gene ID= ENSG00000110665.11 TPM= 9.29 Transcript Type= protein_coding
chr11	2295645	2302961	2295645	2302961	-	transcript431.chr11.nnic@C11orf21	transcript431.chr11.nnic	protein_coding	2302882,2300520,2299428,2295645	2302961,2300613,2299707,2297921	Gene ID= ENSG00000110665.11 TPM= 10.36 Transcript Type= NA
chr11	2295645	2302960	2295645	2302960	-	transcript432.chr11.nnic@C11orf21	transcript432.chr11.nnic	protein_coding	2302882,2300520,2299428,2295645	2302960,2300768,2299707,2297921	Gene ID= ENSG00000110665.11 TPM= 2.92 Transcript Type= NA
chr11	2295645	2299884	2295645	2299884	-	transcript443.chr11.nic@C11orf21	transcript443.chr11.nic	protein_coding	2299428,2295645	2299884,2297921	Gene ID= ENSG00000110665.11 TPM= 2.92 Transcript Type= NA
chr11	2302013	2318142	2302013	2318142	+	ENST00000182290.8@TSPAN32	ENST00000182290.8	protein_coding	2302013,2302844,2304107,2308736,2313654,2314485,2316229,2316576,2317344,2317863	2302215,2302958,2304204,2308810,2313755,2314571,2316312,2316667,2317525,2318142	Gene ID= ENSG00000064201.15 TPM= 4.25 Transcript Type= protein_coding
chr11	2302026	2318142	2302026	2318142	+	ENST00000493924.5@TSPAN32	ENST00000493924.5	protein_coding	2302026,2302844,2304107,2308736,2313654,2314485,2316229,2317346,2317863	2302222,2302958,2304204,2308810,2313755,2314571,2316667,2317525,2318142	Gene ID= ENSG00000064201.15 TPM= 1.06 Transcript Type= retained_intron
chr11	2302013	2318200	2302013	2318200	+	ENST00000612299.4@TSPAN32	ENST00000612299.4	protein_coding	2302013,2302844,2304107,2313654,2314485,2316229,2316576,2317344,2317863	2302215,2302958,2304204,2313755,2314571,2316312,2316667,2317525,2318200	Gene ID= ENSG00000064201.15 TPM= 2.12 Transcript Type= protein_coding
chr11	2302009	2318200	2302009	2318200	+	ENST00000461200.5@TSPAN32	ENST00000461200.5	protein_coding	2302009,2302844,2303410,2304107,2308736,2313654,2314485,2317344,2317863	2302215,2302958,2303481,2304204,2308810,2313708,2316667,2317525,2318200	Gene ID= ENSG00000064201.15 TPM= 1.06 Transcript Type= retained_intron
chr11	2302150	2318142	2302150	2318142	+	ENST00000381121.7@TSPAN32	ENST00000381121.7	protein_coding	2302150,2302844,2304107,2308736,2313654,2314485,2316229,2316576,2317863	2302215,2302958,2304204,2308810,2313755,2314571,2316312,2316667,2318142	Gene ID= ENSG00000064201.15 TPM= 1.06 Transcript Type= protein_coding
chr11	2316205	2318200	2316205	2318200	+	transcript446.chr11.nnic@NA	transcript446.chr11.nnic	NA	2316205	2318200	Gene ID= novel_gene_chr11_447 TPM= 3.19 Transcript Type= NA
chr11	2377294	2397419	2377294	2397419	+	ENST00000263645.9@CD81	ENST00000263645.9	protein_coding	2377294,2390412,2394095,2394972,2395416,2395869,2396628,2396804	2377615,2390526,2394192,2395046,2395520,2395970,2396714,2397419	Gene ID= ENSG00000110651.11 TPM= 460.45 Transcript Type= protein_coding
chr11	2400488	2403878	2400488	2403878	+	ENST00000380996.9@TSSC4	ENST00000380996.9	protein_coding	2400488,2402294,2402611,2402845	2400798,2402450,2402652,2403878	Gene ID= ENSG00000184281.14 TPM= 4.25 Transcript Type= protein_coding
chr11	2400536	2403876	2400536	2403876	+	ENST00000333256.10@TSSC4	ENST00000333256.10	protein_coding	2400536,2402294,2402611	2400798,2402450,2403876	Gene ID= ENSG00000184281.14 TPM= 60.01 Transcript Type= protein_coding
chr11	2402293	2403875	2402293	2403875	+	ENST00000451491.2@TSSC4	ENST00000451491.2	protein_coding	2402293,2402611	2402450,2403875	Gene ID= ENSG00000184281.14 TPM= 5.84 Transcript Type= protein_coding
chr11	2461429	2848991	2461429	2848991	+	transcript474.chr11.nnic@KCNQ1	transcript474.chr11.nnic	protein_coding	2461429,2521479,2527928,2570628,2571325,2572013,2572846,2583435,2585212,2587570,2588713,2661961,2768844,2775960,2776986,2777976,2847767	2461714,2521570,2528018,2570754,2571403,2572109,2572986,2583545,2585307,2587692,2588854,2662081,2768919,2776054,2777032,2778037,2848991	Gene ID= ENSG00000053918.15 TPM= 4.25 Transcript Type= NA
chr11	2444991	2849109	2444991	2849109	+	ENST00000155840.9@KCNQ1	ENST00000155840.9	protein_coding	2444991,2527928,2570628,2571325,2572013,2572846,2583435,2585212,2587570,2588713,2661961,2768844,2775960,2776986,2777976,2847767	2445484,2528018,2570754,2571403,2572109,2572986,2583545,2585307,2587692,2588854,2662081,2768919,2776054,2777032,2778037,2849109	Gene ID= ENSG00000053918.15 TPM= 5.31 Transcript Type= protein_coding
chr11	2509166	2511605	2509166	2511605	-	transcript495.chr11.nnic@NA	transcript495.chr11.nnic	NA	2511460,2510154,2509166	2511605,2510277,2509726	Gene ID= novel_gene_chr11_496 TPM= 4.25 Transcript Type= NA
chr11	2883213	2885881	2883213	2885881	-	ENST00000414822.7@CDKN1C	ENST00000414822.7	protein_coding	2884670,2883999,2883213	2885881,2884134,2883915	Gene ID= ENSG00000129757.12 TPM= 1.06 Transcript Type= protein_coding
chr11	2883213	2885749	2883213	2885749	-	ENST00000380725.1@CDKN1C	ENST00000380725.1	protein_coding	2885634,2885202,2883999,2883213	2885749,2885466,2884134,2883915	Gene ID= ENSG00000129757.12 TPM= 2.12 Transcript Type= protein_coding
chr11	2902269	2925240	2902269	2925240	+	transcript504.chr11.nic@SLC22A18	transcript504.chr11.nic	protein_coding	2902269,2903214,2908233,2909196,2909578,2916622,2917988,2918906,2919307,2922102,2922436,2925010	2902364,2903489,2908330,2909356,2909710,2916740,2918095,2919008,2919407,2922203,2922556,2925240	Gene ID= ENSG00000110628.13 TPM= 3.19 Transcript Type= NA
chr11	2902193	2925246	2902193	2925246	+	ENST00000312221.9@SLC22A18	ENST00000312221.9	protein_coding	2902193,2903214,2908233,2909196,2909578,2916622,2917988,2919307,2922102,2922436,2925010	2902364,2903489,2908330,2909356,2909710,2916740,2918095,2919407,2922203,2922556,2925246	Gene ID= ENSG00000110628.13 TPM= 23.37 Transcript Type= protein_coding
chr11	2914731	2925240	2914731	2925240	+	transcript516.chr11.nnic@SLC22A18	transcript516.chr11.nnic	protein_coding	2914731,2916622,2917988,2919307,2922102,2922436,2925010	2915256,2916740,2918095,2919407,2922203,2922556,2925240	Gene ID= ENSG00000110628.13 TPM= 32.93 Transcript Type= NA
chr11	2902420	2925246	2902420	2925246	+	ENST00000380574.5@SLC22A18	ENST00000380574.5	protein_coding	2902420,2903214,2908233,2909196,2909578,2916622,2917988,2919307,2922102,2922436,2925010	2902718,2903489,2908330,2909356,2909710,2916740,2918095,2919407,2922203,2922556,2925246	Gene ID= ENSG00000110628.13 TPM= 3.19 Transcript Type= protein_coding
chr11	2928273	2929455	2928273	2929455	-	ENST00000314222.4@PHLDA2	ENST00000314222.4	protein_coding	2928896,2928273	2929455,2928667	Gene ID= ENSG00000181649.5 TPM= 1.06 Transcript Type= protein_coding
chr11	2944437	2992256	2944437	2992256	-	transcript537.chr11.nic@NAP1L4	transcript537.chr11.nic	protein_coding	2991794,2979207,2978284,2976024,2972102,2971448,2969803,2964680,2959770,2958399,2955744,2954527,2951780,2951259,2949227,2944437	2992256,2979237,2978342,2976123,2972243,2971534,2969934,2964751,2959909,2958544,2955766,2954646,2951809,2951315,2949264,2945646	Gene ID= ENSG00000205531.12 TPM= 41.54 Transcript Type= NA
chr11	2944431	2992256	2944431	2992256	-	transcript541.chr11.nic@NAP1L4	transcript541.chr11.nic	protein_coding	2991794,2979207,2978284,2976024,2972102,2971448,2969803,2964680,2959770,2958399,2955744,2954527,2951780,2951259,2944431	2992256,2979237,2978342,2976123,2972243,2971534,2969934,2964751,2959909,2958544,2955766,2954646,2951809,2951315,2945646	Gene ID= ENSG00000205531.12 TPM= 86.15 Transcript Type= NA
chr11	2944431	2992377	2944431	2992377	-	ENST00000620138.4@NAP1L4	ENST00000620138.4	protein_coding	2992254,2979207,2978284,2976024,2972102,2971448,2969803,2964680,2959770,2958399,2955744,2954527,2951780,2951259,2944431	2992377,2979237,2978342,2976123,2972243,2971534,2969934,2964751,2959909,2958544,2955766,2954646,2951809,2951315,2945646	Gene ID= ENSG00000205531.12 TPM= 194.49 Transcript Type= protein_coding
chr11	2944437	2992377	2944437	2992377	-	ENST00000380542.8@NAP1L4	ENST00000380542.8	protein_coding	2992254,2979207,2978284,2976024,2972102,2971448,2969803,2964680,2959770,2958399,2955744,2954527,2951780,2951259,2949227,2944437	2992377,2979237,2978342,2976123,2972243,2971534,2969934,2964751,2959909,2958544,2955766,2954646,2951809,2951315,2949264,2945646	Gene ID= ENSG00000205531.12 TPM= 95.71 Transcript Type= protein_coding
chr11	3000922	3057613	3000922	3057613	-	ENST00000397111.9@CARS	ENST00000397111.9	protein_coding	3057343,3042165,3040896,3039835,3039194,3038050,3029303,3028996,3026676,3020220,3019139,3018620,3018408,3017857,3017106,3015781,3012195,3006879,3005366,3002541,3001970,3000922	3057613,3042256,3040984,3039931,3039292,3038199,3029443,3029084,3026797,3020332,3019267,3018749,3018511,3017954,3017295,3015849,3012276,3006959,3005433,3002600,3002053,3001248	Gene ID= ENSG00000110619.17 TPM= 22.31 Transcript Type= protein_coding
chr11	3000922	3057437	3000922	3057437	-	ENST00000380525.8@CARS	ENST00000380525.8	protein_coding	3057343,3047753,3042165,3040896,3039835,3039194,3038050,3029303,3028996,3026676,3020220,3019139,3018620,3018408,3017857,3017106,3015781,3012195,3006879,3005366,3002541,3001970,3000922	3057437,3048001,3042256,3040984,3039931,3039292,3038199,3029443,3029084,3026797,3020332,3019267,3018749,3018511,3017954,3017295,3015849,3012276,3006959,3005433,3002600,3002053,3001248	Gene ID= ENSG00000110619.17 TPM= 8.5 Transcript Type= protein_coding
chr11	3000929	3057418	3000929	3057418	-	ENST00000278224.13@CARS	ENST00000278224.13	protein_coding	3057343,3042165,3040896,3039835,3039194,3038050,3029303,3028996,3026676,3020220,3019139,3018620,3018408,3017857,3017106,3015781,3012195,3006879,3005366,3002541,3001962,3000929	3057418,3042256,3040984,3039931,3039292,3038199,3029443,3029084,3026797,3020332,3019267,3018749,3018511,3017954,3017295,3015849,3012276,3006959,3005433,3002600,3002053,3001248	Gene ID= ENSG00000110619.17 TPM= 4.25 Transcript Type= protein_coding
chr11	3087116	3165354	3087116	3165354	-	ENST00000263650.11@OSBPL5	ENST00000263650.11	protein_coding	3165216,3129013,3126473,3122348,3121997,3120421,3119547,3107771,3107263,3104193,3103239,3102183,3101603,3100158,3094237,3093746,3093527,3092867,3092432,3090558,3089846,3087116	3165354,3129169,3126555,3122428,3122098,3120624,3119631,3107945,3107455,3104377,3103320,3102281,3101699,3100256,3094334,3093835,3093663,3093052,3092558,3090696,3089948,3088343	Gene ID= ENSG00000021762.19 TPM= 30.8 Transcript Type= protein_coding
chr11	3357928	3379222	3357928	3379222	-	ENST00000343338.11@ZNF195	ENST00000343338.11	protein_coding	3379038,3373577,3371577,3370975,3357928	3379222,3373675,3371703,3371070,3360565	Gene ID= ENSG00000005801.16 TPM= 1.06 Transcript Type= protein_coding
chr11	3357927	3379145	3357927	3379145	-	ENST00000354599.10@ZNF195	ENST00000354599.10	protein_coding	3379038,3371577,3370975,3357927	3379145,3371703,3371070,3360565	Gene ID= ENSG00000005801.16 TPM= 2.12 Transcript Type= protein_coding
chr11	3638503	3642255	3638503	3642255	-	ENST00000397068.7@ART5	ENST00000397068.7	protein_coding	3641806,3639642,3639003,3638503	3642255,3640371,3639035,3638793	Gene ID= ENSG00000167311.13 TPM= 2.12 Transcript Type= protein_coding
chr11	3665587	3671384	3665587	3671384	-	ENST00000250699.2@CHRNA10	ENST00000250699.2	protein_coding	3671252,3669796,3669196,3667232,3665587	3671384,3669941,3669350,3667764,3666564	Gene ID= ENSG00000129749.3 TPM= 3.19 Transcript Type= protein_coding
chr11	3711835	3797566	3711835	3797566	-	transcript581.chr11.nic@NUP98	transcript581.chr11.nic	protein_coding	3797400,3782042,3779156,3778873,3775882,3773632,3771748,3768581,3762902,3760539,3753316,3735191,3731391,3725103,3723157,3720712,3719412,3713818,3711835	3797566,3782145,3779257,3779049,3776021,3773739,3771928,3768744,3763039,3760626,3753408,3735324,3731578,3725219,3723455,3720825,3719550,3713995,3712728	Gene ID= ENSG00000110713.15 TPM= 2.12 Transcript Type= NA
chr11	3711553	3797541	3711553	3797541	-	ENST00000397004.8@NUP98	ENST00000397004.8	protein_coding	3797400,3782042,3779156,3778873,3775882,3773632,3771748,3768581,3762902,3760539,3753316,3744509,3735191,3731391,3725103,3723157,3720712,3719412,3713818,3711553	3797541,3782145,3779257,3779049,3776021,3773739,3771928,3768744,3763039,3760626,3753408,3744649,3735324,3731578,3725219,3723455,3720825,3719550,3713995,3712728	Gene ID= ENSG00000110713.15 TPM= 2.12 Transcript Type= protein_coding
chr11	3711835	3797547	3711835	3797547	-	ENST00000397007.8@NUP98	ENST00000397007.8	protein_coding	3797400,3782042,3779156,3778873,3775882,3773632,3771748,3768581,3762902,3760488,3753316,3744509,3735191,3731391,3725103,3723157,3720712,3719412,3713818,3711835	3797547,3782145,3779257,3779049,3776021,3773739,3771928,3768744,3763039,3760626,3753408,3744649,3735324,3731578,3725219,3723455,3720825,3719550,3713995,3712728	Gene ID= ENSG00000110713.15 TPM= 6.37 Transcript Type= protein_coding
chr11	3797819	3826352	3797819	3826352	+	ENST00000300730.10@PGAP2	ENST00000300730.10	protein_coding	3797819,3808294,3811250,3823883,3824270,3825020,3825328	3797982,3808315,3811424,3824135,3824364,3825128,3826352	Gene ID= ENSG00000148985.19 TPM= 14.87 Transcript Type= protein_coding
chr11	3808594	3826330	3808594	3826330	+	ENST00000496834.6@PGAP2	ENST00000496834.6	protein_coding	3808594,3823883,3824270,3825020,3825328	3808651,3824135,3824376,3825128,3826330	Gene ID= ENSG00000148985.19 TPM= 5.31 Transcript Type= protein_coding
chr11	3826978	3840983	3826978	3840983	-	ENST00000351018.4@RHOG	ENST00000351018.4	protein_coding	3840894,3826978	3840983,3828206	Gene ID= ENSG00000177105.9 TPM= 30.8 Transcript Type= protein_coding
chr11	3855188	4093209	3855188	4093209	+	transcript604.chr11.nnic@STIM1	transcript604.chr11.nnic	protein_coding	3855188,3855641,3967552,4023873,4055526,4059281,4070026,4074502,4082184,4082882,4083263,4084673,4086477,4091282	3855443,3856409,3967682,4023987,4055637,4059396,4070203,4074679,4082351,4082982,4083498,4084765,4086543,4093209	Gene ID= ENSG00000167323.11 TPM= 9.29 Transcript Type= NA
chr11	3855178	4093209	3855178	4093209	+	transcript605.chr11.nnic@STIM1	transcript605.chr11.nnic	protein_coding	3855178,3855645,3967552,4023873,4055526,4059281,4070026,4074502,4082184,4082882,4083263,4086477,4091282	3855473,3856409,3967682,4023987,4055637,4059396,4070203,4074679,4082351,4082982,4083498,4086543,4093209	Gene ID= ENSG00000167323.11 TPM= 4.51 Transcript Type= NA
chr11	3855568	4093209	3855568	4093209	+	transcript606.chr11.nic@STIM1	transcript606.chr11.nic	protein_coding	3855568,3967552,4023873,4055526,4059281,4070026,4074502,4082184,4082882,4083263,4084673,4086477,4091282	3856409,3967682,4023987,4055637,4059396,4070203,4074679,4082351,4082982,4083498,4084765,4086543,4093209	Gene ID= ENSG00000167323.11 TPM= 8.23 Transcript Type= NA
chr11	3855178	4083654	3855178	4083654	+	transcript609.chr11.nnic@STIM1	transcript609.chr11.nnic	protein_coding	3855178,3855645,3967552,4023873,4055526,4059281,4070026,4074502,4082184,4082882,4083263	3855473,3856409,3967682,4023987,4055637,4059396,4070203,4074679,4082351,4082982,4083654	Gene ID= ENSG00000167323.11 TPM= 10.62 Transcript Type= NA
chr11	3855702	4093209	3855702	4093209	+	ENST00000300737.8@STIM1	ENST00000300737.8	protein_coding	3855702,3967552,4023873,4055526,4059281,4070026,4074502,4082184,4082882,4083263,4086477,4091282	3856409,3967682,4023987,4055637,4059396,4070203,4074679,4082351,4082982,4083498,4086543,4093209	Gene ID= ENSG00000167323.11 TPM= 8.76 Transcript Type= protein_coding
chr11	4094809	4138876	4094809	4138876	+	ENST00000300738.9@RRM1	ENST00000300738.9	protein_coding	4094809,4101993,4106046,4107435,4109644,4111601,4111900,4118320,4119845,4121604,4122141,4123183,4126684,4127035,4129074,4132286,4133563,4135082,4138195	4095031,4102081,4106223,4107535,4109703,4111640,4112062,4118461,4119928,4121765,4122220,4123384,4126833,4127256,4129150,4132421,4133658,4135270,4138876	Gene ID= ENSG00000167325.14 TPM= 23.37 Transcript Type= protein_coding
chr11	4187140	4202655	4187140	4202655	+	ENST00000525365.1@AC015689.1	ENST00000525365.1	lincRNA	4187140,4202259	4187204,4202655	Gene ID= ENSG00000254480.1 TPM= 1.06 Transcript Type= lincRNA
chr11	4384902	4393696	4384902	4393696	-	ENST00000254436.7@TRIM21	ENST00000254436.7	protein_coding	4393633,4390002,4389654,4388300,4386968,4386157,4384902	4393696,4390458,4389749,4388530,4386990,4386257,4385853	Gene ID= ENSG00000132109.9 TPM= 7.44 Transcript Type= protein_coding
chr11	4598672	4608259	4598672	4608259	-	ENST00000300747.9@TRIM68	ENST00000300747.9	protein_coding	4608027,4605079,4603245,4602152,4601664,4601027,4598672	4608259,4605561,4603340,4602412,4601686,4601127,4600826	Gene ID= ENSG00000167333.12 TPM= 22.31 Transcript Type= protein_coding
chr11	4643420	4655488	4643420	4655488	+	ENST00000530215.2@OR51E1	ENST00000530215.2	protein_coding	4643420,4652488,4653327	4644030,4652656,4655488	Gene ID= ENSG00000180785.9 TPM= 2.12 Transcript Type= protein_coding
chr11	4643420	4655488	4643420	4655488	+	ENST00000396952.5@OR51E1	ENST00000396952.5	protein_coding	4643420,4652488	4644030,4655488	Gene ID= ENSG00000180785.9 TPM= 2.12 Transcript Type= protein_coding
chr11	5225464	5227071	5225464	5227071	-	ENST00000335295.4@HBB	ENST00000335295.4	protein_coding	5226930,5226577,5225464	5227071,5226799,5225726	Gene ID= ENSG00000244734.3 TPM= 149.76 Transcript Type= protein_coding
chr11	5624983	5644398	5624983	5644398	+	ENST00000429814.2@TRIM34	ENST00000429814.2	protein_coding	5624983,5632255,5633804,5634631,5641167,5642406,5642817,5643144	5625060,5632754,5633899,5634861,5641189,5642506,5642843,5644398	Gene ID= ENSG00000258659.6 TPM= 1.06 Transcript Type= protein_coding
chr11	5663557	5685063	5663557	5685063	-	ENST00000380034.7@TRIM5	ENST00000380034.7	protein_coding	5684868,5679761,5679074,5678204,5667689,5665981,5665656,5663557	5685063,5680238,5679169,5678434,5667711,5666081,5665682,5665395	Gene ID= ENSG00000132256.18 TPM= 3.19 Transcript Type= protein_coding
chr11	6211335	6234616	6211335	6234616	-	ENST00000449352.6@FAM160A2	ENST00000449352.6	protein_coding	6234544,6224379,6223610,6223080,6222811,6222442,6218971,6218600,6217371,6214733,6214411,6211335	6234616,6224707,6224248,6223238,6222897,6222609,6219050,6218763,6218150,6214911,6214573,6211867	Gene ID= ENSG00000051009.10 TPM= 15.93 Transcript Type= protein_coding
chr11	6318946	6320501	6318946	6320501	-	transcript650.chr11.nnic@NA	transcript650.chr11.nnic	NA	6318946	6320501	Gene ID= novel_gene_chr11_651 TPM= 6.37 Transcript Type= NA
chr11	6318946	6320501	6318946	6320501	-	transcript644.chr11.nic@CAVIN3	transcript644.chr11.nic	protein_coding	6320093,6319657,6318946	6320501,6319671,6319564	Gene ID= ENSG00000170955.9 TPM= 5.31 Transcript Type= NA
chr11	6318946	6320062	6318946	6320062	-	ENST00000532354.1@CAVIN3	ENST00000532354.1	protein_coding	6319657,6318946	6320062,6319564	Gene ID= ENSG00000170955.9 TPM= 8.5 Transcript Type= retained_intron
chr11	6319142	6330796	6319142	6330796	+	transcript641.chr11.nnic@AC068733.3	transcript641.chr11.nnic	lincRNA	6319142,6323585,6323894,6330170	6319697,6323692,6324035,6330796	Gene ID= ENSG00000282556.1 TPM= 3.19 Transcript Type= NA
chr11	6319142	6330749	6319142	6330749	+	transcript642.chr11.nnic@AC068733.3	transcript642.chr11.nnic	lincRNA	6319142,6323585,6323894,6330241	6319697,6323692,6324035,6330749	Gene ID= ENSG00000282556.1 TPM= 2.12 Transcript Type= NA
chr11	6390431	6394995	6390431	6394995	+	ENST00000342245.8@SMPD1	ENST00000342245.8	protein_coding	6390431,6391384,6393216,6393617,6393896,6394198	6390916,6392156,6393387,6393693,6394041,6394995	Gene ID= ENSG00000166311.9 TPM= 55.23 Transcript Type= protein_coding
chr11	6392488	6394512	6392488	6394512	-	transcript679.chr11.nnic@NA	transcript679.chr11.nnic	NA	6392488	6394512	Gene ID= novel_gene_chr11_680 TPM= 25.49 Transcript Type= NA
chr11	6395125	6419113	6395125	6419113	-	transcript666.chr11.nnic@APBB1	transcript666.chr11.nnic	protein_coding	6418985,6410627,6403647,6403488,6403319,6403145,6402576,6402082,6401574,6401345,6400989,6396100,6395786,6395125	6419113,6411361,6403837,6403544,6403404,6403208,6402725,6402209,6401688,6401429,6401072,6396215,6395962,6395701	Gene ID= ENSG00000166313.18 TPM= 22.49 Transcript Type= NA
chr11	6395125	6419070	6395125	6419070	-	ENST00000299402.10@APBB1	ENST00000299402.10	protein_coding	6418985,6410627,6403647,6403488,6403319,6403145,6402576,6402082,6401574,6401345,6400989,6396100,6395786,6395125	6419070,6411361,6403822,6403544,6403404,6403208,6402725,6402209,6401688,6401429,6401072,6396215,6395962,6395701	Gene ID= ENSG00000166313.18 TPM= 130.3 Transcript Type= protein_coding
chr11	6395125	6419414	6395125	6419414	-	ENST00000311051.7@APBB1	ENST00000311051.7	protein_coding	6419346,6410627,6403647,6403488,6403319,6403145,6402576,6402082,6401574,6401345,6400989,6396100,6395786,6395125	6419414,6411361,6403822,6403544,6403404,6403208,6402725,6402209,6401688,6401429,6401072,6396215,6395962,6395701	Gene ID= ENSG00000166313.18 TPM= 25.14 Transcript Type= protein_coding
chr11	6448617	6473984	6448617	6473984	-	ENST00000359518.7@TRIM3	ENST00000359518.7	protein_coding	6473791,6473084,6465565,6458065,6457696,6457296,6456297,6456072,6451271,6450892,6450551,6449306,6448617	6473984,6473248,6465732,6458296,6457847,6457476,6457029,6456175,6451438,6451060,6450621,6449446,6449180	Gene ID= ENSG00000110171.19 TPM= 1.94 Transcript Type= protein_coding
chr11	6448615	6473984	6448615	6473984	-	ENST00000345851.7@TRIM3	ENST00000345851.7	protein_coding	6473791,6465565,6458065,6457696,6457296,6456297,6456072,6451271,6450892,6450551,6449306,6448615	6473984,6465732,6458296,6457847,6457476,6457029,6456175,6451438,6451060,6450621,6449446,6449180	Gene ID= ENSG00000110171.19 TPM= 22.66 Transcript Type= protein_coding
chr11	6448615	6473954	6448615	6473954	-	transcript683.chr11.nic@TRIM3	transcript683.chr11.nic	protein_coding	6473791,6465565,6458065,6457696,6457296,6456297,6456072,6451271,6450892,6449306,6448615	6473954,6465732,6458296,6457847,6457476,6457029,6456175,6451438,6451060,6450621,6449180	Gene ID= ENSG00000110171.19 TPM= 6.19 Transcript Type= NA
chr11	6476519	6481436	6476519	6481436	-	ENST00000396777.7@ARFIP2	ENST00000396777.7	protein_coding	6481231,6480323,6479972,6479140,6478738,6478041,6477718,6476519	6481436,6480463,6480068,6479258,6478959,6478198,6477892,6477268	Gene ID= ENSG00000132254.12 TPM= 12.75 Transcript Type= protein_coding
chr11	6481447	6484679	6481447	6484679	+	ENST00000254616.10@TIMM10B	ENST00000254616.10	protein_coding	6481447,6481757,6482045	6481555,6481852,6484679	Gene ID= ENSG00000132286.11 TPM= 19.12 Transcript Type= protein_coding
chr11	6484094	6486097	6484094	6486097	-	transcript693.chr11.nnic@NA	transcript693.chr11.nnic	NA	6484094	6486097	Gene ID= novel_gene_chr11_694 TPM= 3.19 Transcript Type= NA
chr11	6599920	6604425	6599920	6604425	-	transcript717.chr11.nnic@RRP8	transcript717.chr11.nnic	protein_coding	6604059,6603404,6601852,6601149,6600926,6600669,6600486,6599920	6604425,6603583,6602215,6601602,6601055,6600775,6600582,6600265	Gene ID= ENSG00000132275.10 TPM= 4.25 Transcript Type= NA
chr11	6599920	6603579	6599920	6603579	-	ENST00000534343.1@RRP8	ENST00000534343.1	protein_coding	6603404,6600669,6600486,6599920	6603579,6600775,6600582,6600265	Gene ID= ENSG00000132275.10 TPM= 2.12 Transcript Type= protein_coding
chr11	6603708	6610874	6603708	6610874	+	ENST00000532063.5@ILK	ENST00000532063.5	protein_coding	6603708,6604226,6608394,6608694,6608884,6609071,6609299,6609512,6609724,6609936,6610148,6610462	6603822,6604360,6608489,6608790,6608967,6609156,6609408,6609639,6609845,6610035,6610278,6610874	Gene ID= ENSG00000166333.13 TPM= 9.6 Transcript Type= protein_coding
chr11	6603758	6610833	6603758	6610833	+	ENST00000420936.6@ILK	ENST00000420936.6	protein_coding	6603758,6604226,6608046,6608394,6608694,6608884,6609071,6609299,6609512,6609724,6609936,6610148,6610462	6603822,6604360,6608211,6608489,6608790,6608967,6609156,6609408,6609639,6609845,6610035,6610278,6610833	Gene ID= ENSG00000166333.13 TPM= 454.94 Transcript Type= protein_coding
chr11	6603731	6610870	6603731	6610870	+	ENST00000299421.8@ILK	ENST00000299421.8	protein_coding	6603731,6604180,6608046,6608394,6608694,6608884,6609071,6609299,6609512,6609724,6609936,6610148,6610462	6603822,6604360,6608211,6608489,6608790,6608967,6609156,6609408,6609639,6609845,6610035,6610278,6610870	Gene ID= ENSG00000166333.13 TPM= 110.96 Transcript Type= protein_coding
chr11	6603744	6610835	6603744	6610835	+	ENST00000537806.5@ILK	ENST00000537806.5	protein_coding	6603744,6604226,6608046,6608394,6608694,6609071,6609299,6609512,6609724,6609936,6610148,6610462	6603822,6604360,6608211,6608489,6608967,6609156,6609408,6609639,6609845,6610035,6610278,6610835	Gene ID= ENSG00000166333.13 TPM= 1.06 Transcript Type= protein_coding
chr11	6603787	6610866	6603787	6610866	+	ENST00000528995.5@ILK	ENST00000528995.5	protein_coding	6603787,6604180,6608046,6608394,6608884,6609299,6609512,6609724,6609936,6610148,6610462	6603822,6604360,6608211,6608489,6608967,6609408,6609639,6609845,6610035,6610278,6610866	Gene ID= ENSG00000166333.13 TPM= 2.04 Transcript Type= protein_coding
chr11	6603816	6610870	6603816	6610870	+	ENST00000396751.6@ILK	ENST00000396751.6	protein_coding	6603816,6608046,6608394,6608694,6608884,6609071,6609299,6609512,6609724,6609936,6610148,6610462	6604360,6608211,6608489,6608790,6608967,6609156,6609408,6609639,6609845,6610035,6610278,6610870	Gene ID= ENSG00000166333.13 TPM= 22.8 Transcript Type= protein_coding
chr11	6605515	6609192	6605515	6609192	-	transcript738.chr11.nnic@NA	transcript738.chr11.nnic	NA	6605515	6609192	Gene ID= novel_gene_chr11_739 TPM= 5.31 Transcript Type= NA
chr11	6610842	6612187	6610842	6612187	-	transcript723.chr11.nnic@TAF10	transcript723.chr11.nnic	protein_coding	6611958,6611535,6611388,6611189,6610842	6612187,6611818,6611452,6611303,6611011	Gene ID= ENSG00000166337.9 TPM= 5.31 Transcript Type= NA
chr11	6610842	6612667	6610842	6612667	-	ENST00000299424.8@TAF10	ENST00000299424.8	protein_coding	6611958,6611664,6611388,6611189,6610842	6612667,6611818,6611452,6611303,6611011	Gene ID= ENSG00000166337.9 TPM= 112.59 Transcript Type= protein_coding
chr11	6612763	6619461	6612763	6619461	-	ENST00000299427.10@TPP1	ENST00000299427.10	protein_coding	6619384,6619196,6618776,6617626,6617301,6616975,6616661,6616315,6616005,6615442,6615171,6614866,6612763	6619461,6619267,6618915,6617776,6617428,6617153,6616859,6616503,6616074,6615562,6615329,6614991,6614686	Gene ID= ENSG00000166340.15 TPM= 28.68 Transcript Type= protein_coding
chr11	6621323	6655854	6621323	6655854	-	ENST00000299441.4@DCHS1	ENST00000299441.4	protein_coding	6655563,6639817,6634118,6633789,6633412,6632031,6631616,6631311,6631053,6629999,6629672,6629452,6628621,6626789,6626552,6626169,6625920,6625597,6625198,6624730,6621323	6655854,6641733,6634306,6634020,6633648,6633056,6631809,6631407,6631210,6630863,6629911,6629577,6628830,6627667,6626665,6626380,6626074,6625727,6625481,6624868,6624390	Gene ID= ENSG00000166341.7 TPM= 10.62 Transcript Type= protein_coding
chr11	6680782	6683401	6680782	6683401	-	ENST00000288937.6@MRPL17	ENST00000288937.6	protein_coding	6683123,6682747,6680782	6683401,6682815,6682402	Gene ID= ENSG00000158042.8 TPM= 8.5 Transcript Type= protein_coding
chr11	6681951	6683296	6681951	6683296	-	ENST00000529958.1@MRPL17	ENST00000529958.1	protein_coding	6682747,6681951	6683296,6682402	Gene ID= ENSG00000158042.8 TPM= 1.06 Transcript Type= retained_intron
chr11	7251950	7469042	7251950	7469042	+	ENST00000318881.10@SYT9	ENST00000318881.10	protein_coding	7251950,7303039,7313395,7416042,7417957,7420506,7466792	7252331,7303390,7313941,7416162,7418128,7420635,7469042	Gene ID= ENSG00000170743.16 TPM= 2.12 Transcript Type= protein_coding
chr11	7485526	7488965	7485526	7488965	+	ENST00000528308.1@OLFML1	ENST00000528308.1	protein_coding	7485526,7488127	7486004,7488965	Gene ID= ENSG00000183801.7 TPM= 1.06 Transcript Type= retained_intron
chr11	7668503	7670366	7668503	7670366	+	transcript761.chr11.nnic@NA	transcript761.chr11.nnic	NA	7668503	7670366	Gene ID= novel_gene_chr11_762 TPM= 2.12 Transcript Type= NA
chr11	7987320	7996169	7987320	7996169	+	ENST00000309828.4@EIF3F	ENST00000309828.4	protein_coding	7987320,7991781,7992084,7992887,7994426,7994982,7995254,7995945	7987716,7991851,7992163,7993024,7994517,7995118,7995367,7996169	Gene ID= ENSG00000175390.13 TPM= 152.95 Transcript Type= protein_coding
chr11	8103153	8106242	8103153	8106242	+	transcript773.chr11.nnic@NA	transcript773.chr11.nnic	NA	8103153	8106242	Gene ID= novel_gene_chr11_774 TPM= 10.62 Transcript Type= NA
chr11	8108942	8169055	8108942	8169055	-	ENST00000343202.8@RIC3	ENST00000343202.8	protein_coding	8168866,8139967,8138272,8137378,8126659,8108942	8169055,8140193,8138347,8137471,8126804,8111137	Gene ID= ENSG00000166405.14 TPM= 3.19 Transcript Type= protein_coding
chr11	8391871	8594197	8391871	8594197	-	transcript784.chr11.nnic@STK33	transcript784.chr11.nnic	protein_coding	8594083,8474681,8473163,8464709,8461805,8457341,8454744,8452822,8440678,8436027,8435494,8413495,8391871	8594197,8475066,8473276,8464822,8461909,8457479,8454832,8452906,8440753,8436139,8435579,8413692,8392710	Gene ID= ENSG00000130413.15 TPM= 4.78 Transcript Type= NA
chr11	8682411	8689872	8682411	8689872	+	ENST00000314138.10@RPL27A	ENST00000314138.10	protein_coding	8682411,8683202,8684006,8684718,8685678	8682816,8683265,8684081,8684892,8689872	Gene ID= ENSG00000166441.12 TPM= 91.35 Transcript Type= protein_coding
chr11	8682810	8685848	8682810	8685848	+	ENST00000530022.5@RPL27A	ENST00000530022.5	protein_coding	8682810,8684006,8684718,8685678	8683265,8684081,8684892,8685848	Gene ID= ENSG00000166441.12 TPM= 91.35 Transcript Type= protein_coding
chr11	8682794	8686374	8682794	8686374	-	transcript810.chr11.nnic@NA	transcript810.chr11.nnic	NA	8682794	8686374	Gene ID= novel_gene_chr11_811 TPM= 3.19 Transcript Type= NA
chr11	8693352	8810840	8693352	8810840	-	ENST00000313726.10@ST5	ENST00000313726.10	protein_coding	8810517,8750621,8729950,8726073,8717741,8715603,8714610,8713998,8712551,8711122,8710845,8707777,8707085,8702572,8699213,8698933,8697525,8696427,8695463,8693352	8810840,8750725,8731209,8726209,8717892,8715818,8714706,8714042,8712735,8711231,8710914,8707854,8707225,8702720,8699390,8698974,8697636,8696666,8695549,8694130	Gene ID= ENSG00000166444.18 TPM= 24.96 Transcript Type= protein_coding
chr11	8693353	8718049	8693353	8718049	-	transcript801.chr11.nic@ST5	transcript801.chr11.nic	protein_coding	8717741,8715603,8714610,8713998,8712551,8711122,8710845,8707777,8707085,8702572,8699213,8698933,8697525,8696427,8695463,8693353	8718049,8715818,8714706,8714042,8712735,8711231,8710914,8707854,8707225,8702720,8699390,8698974,8697636,8696666,8695549,8694130	Gene ID= ENSG00000166444.18 TPM= 21.77 Transcript Type= NA
chr11	8774865	8778429	8774865	8778429	-	transcript812.chr11.nnic@NA	transcript812.chr11.nnic	NA	8774865	8778429	Gene ID= novel_gene_chr11_813 TPM= 3.19 Transcript Type= NA
chr11	8911140	8920084	8911140	8920084	+	ENST00000309377.8@AKIP1	ENST00000309377.8	protein_coding	8911140,8911444,8912453,8914826,8917287,8919337	8911223,8911671,8912533,8914930,8917367,8920084	Gene ID= ENSG00000166452.11 TPM= 21.24 Transcript Type= protein_coding
chr11	8911139	8920084	8911139	8920084	+	ENST00000299576.9@AKIP1	ENST00000299576.9	protein_coding	8911139,8911444,8914826,8917287,8919337	8911223,8911671,8914930,8917367,8920084	Gene ID= ENSG00000166452.11 TPM= 11.68 Transcript Type= protein_coding
chr11	8947294	8964773	8947294	8964773	-	ENST00000534025.5@TMEM9B	ENST00000534025.5	protein_coding	8964209,8962092,8956190,8953203,8947294	8964773,8962183,8956298,8953337,8948475	Gene ID= ENSG00000175348.10 TPM= 112.59 Transcript Type= protein_coding
chr11	8947294	8964441	8947294	8964441	-	ENST00000309134.9@TMEM9B	ENST00000309134.9	protein_coding	8964209,8956190,8953203,8947294	8964441,8956298,8953337,8948475	Gene ID= ENSG00000175348.10 TPM= 4.25 Transcript Type= protein_coding
chr11	8964553	8966502	8964553	8966502	+	transcript827.chr11.nic@TMEM9B-AS1	transcript827.chr11.nic	antisense_RNA	8964553,8965904	8965148,8966502	Gene ID= ENSG00000254860.5 TPM= 2.12 Transcript Type= NA
chr11	8980576	9004049	8980576	9004049	-	ENST00000309166.7@NRIP3	ENST00000309166.7	protein_coding	9003762,8988118,8987548,8985711,8984072,8983875,8980576	9004049,8988282,8987630,8985850,8984124,8983969,8983560	Gene ID= ENSG00000175352.10 TPM= 2.12 Transcript Type= protein_coding
chr11	9138825	9265390	9138825	9265390	-	ENST00000328194.7@DENND5A	ENST00000328194.7	protein_coding	9264961,9207561,9206673,9203660,9193494,9180767,9178858,9178132,9170627,9169856,9165836,9160713,9152358,9150680,9150081,9147030,9145670,9144995,9144097,9143403,9142722,9141940,9138825	9265390,9207632,9206782,9204317,9193681,9181084,9179073,9178366,9170777,9169949,9165967,9160865,9152442,9150764,9150209,9147151,9145815,9145113,9144278,9143485,9142845,9142108,9139854	Gene ID= ENSG00000184014.7 TPM= 90.28 Transcript Type= protein_coding
chr11	9280671	9314780	9280671	9314780	-	ENST00000528080.5@TMEM41B	ENST00000528080.5	protein_coding	9314321,9299584,9295259,9288442,9287702,9286455,9280671	9314780,9299701,9295387,9288535,9287806,9286593,9283593	Gene ID= ENSG00000166471.10 TPM= 36.11 Transcript Type= protein_coding
chr11	9384622	9448126	9384622	9448126	+	ENST00000379719.7@IPO7	ENST00000379719.7	protein_coding	9384622,9403290,9408486,9409928,9414255,9417059,9420411,9420614,9423006,9423777,9424914,9425146,9428540,9429031,9429674,9430875,9433570,9433721,9434934,9436271,9437754,9438080,9440455,9442081,9445097	9384847,9403371,9408639,9410086,9414411,9417148,9420505,9420698,9423140,9423876,9424990,9425262,9428629,9429196,9429834,9431003,9433636,9433846,9435031,9436366,9437974,9438285,9440661,9442197,9448126	Gene ID= ENSG00000205339.9 TPM= 3.19 Transcript Type= protein_coding
chr11	9415793	9417869	9415793	9417869	-	transcript863.chr11.nnic@NA	transcript863.chr11.nnic	NA	9415793	9417869	Gene ID= novel_gene_chr11_864 TPM= 2.12 Transcript Type= NA
chr11	9459556	9460702	9459556	9460702	-	ENST00000596206.2@AC132192.2	ENST00000596206.2	antisense_RNA	9459556	9460702	Gene ID= ENSG00000268403.2 TPM= 1.06 Transcript Type= antisense_RNA
chr11	9460965	9528524	9460965	9528524	+	ENST00000396602.6@ZNF143	ENST00000396602.6	protein_coding	9460965,9471302,9472677,9473941,9474550,9478390,9479472,9494646,9496303,9497675,9501091,9508619,9512448,9516201,9525240,9527530	9461076,9471420,9472769,9474024,9474633,9478586,9479546,9494765,9496378,9497800,9501270,9508846,9512596,9516362,9525386,9528524	Gene ID= ENSG00000166478.9 TPM= 12.75 Transcript Type= protein_coding
chr11	9575509	9589749	9575509	9589749	+	transcript890.chr11.nic@WEE1	transcript890.chr11.nic	protein_coding	9575509,9576230,9576487,9577142,9581532,9585258,9585442,9586449,9586711,9588449	9576093,9576293,9576659,9577263,9581678,9585353,9585527,9586619,9586856,9589749	Gene ID= ENSG00000166483.10 TPM= 10.33 Transcript Type= NA
chr11	9575490	9581487	9575490	9581487	+	ENST00000524549.1@WEE1	ENST00000524549.1	protein_coding	9575490,9576230,9576487,9577142	9576093,9576293,9576659,9581487	Gene ID= ENSG00000166483.10 TPM= 1.06 Transcript Type= retained_intron
chr11	9573681	9589207	9573681	9589207	+	ENST00000450114.6@WEE1	ENST00000450114.6	protein_coding	9573681,9575888,9576230,9576487,9577142,9581532,9585258,9585442,9586449,9586711,9588449	9574509,9576093,9576293,9576659,9577263,9581678,9585353,9585527,9586619,9586856,9589207	Gene ID= ENSG00000166483.10 TPM= 59.48 Transcript Type= protein_coding
chr11	9664058	9750372	9664058	9750372	+	transcript902.chr11.nnic@SWAP70	transcript902.chr11.nnic	protein_coding	9664058,9694146,9728053,9729343,9732529,9738213,9740181,9747858,9749087,9749864	9664278,9694286,9728199,9729451,9732710,9738320,9740347,9748056,9749183,9750372	Gene ID= ENSG00000133789.14 TPM= 4.25 Transcript Type= NA
chr11	9664077	9752991	9664077	9752991	+	ENST00000318950.10@SWAP70	ENST00000318950.10	protein_coding	9664077,9694146,9713466,9724658,9728053,9729343,9732529,9738213,9740181,9747858,9749087,9749864	9664278,9694286,9713639,9724885,9728199,9729451,9732710,9738320,9740347,9748056,9749183,9752991	Gene ID= ENSG00000133789.14 TPM= 13.81 Transcript Type= protein_coding
chr11	9664135	9741953	9664135	9741953	+	ENST00000524817.5@SWAP70	ENST00000524817.5	protein_coding	9664135,9694146,9713466,9724658,9728053,9729343,9732529,9738213,9740181	9664278,9694286,9713639,9724885,9728199,9729451,9732710,9738320,9741953	Gene ID= ENSG00000133789.14 TPM= 1.06 Transcript Type= retained_intron
chr11	9778667	10294207	9778667	10294207	-	ENST00000256190.12@SBF2	ENST00000256190.12	protein_coding	10294015,10193902,10042844,10031048,10029765,10028452,10002557,10000914,9998266,9993921,9992990,9992415,9989497,9968341,9963773,9961957,9895943,9858226,9856458,9853540,9852676,9850023,9846956,9845565,9842625,9839498,9832224,9829356,9816840,9812532,9808901,9808000,9795831,9790556,9789109,9787634,9785125,9784351,9781507,9778667	10294207,10193987,10042981,10031170,10029875,10028557,10002689,10001022,9998379,9993998,9993103,9992543,9989595,9968545,9963882,9962106,9896011,9858396,9856720,9853712,9852749,9850218,9847083,9845740,9842770,9839696,9832420,9829496,9817024,9812708,9809002,9808185,9795957,9790683,9789342,9787738,9785318,9784438,9781638,9780516	Gene ID= ENSG00000133812.15 TPM= 1.06 Transcript Type= protein_coding
chr11	9788763	9791880	9788763	9791880	-	transcript915.chr11.nnic@NA	transcript915.chr11.nnic	NA	9788763	9791880	Gene ID= novel_gene_chr11_916 TPM= 2.12 Transcript Type= NA
chr11	10304680	10307397	10304680	10307397	+	ENST00000278175.9@ADM	ENST00000278175.9	protein_coding	10304680,10305680,10305949,10306332	10305229,10305798,10306098,10307397	Gene ID= ENSG00000148926.9 TPM= 3.19 Transcript Type= protein_coding
chr11	10511923	10517740	10511923	10517740	-	ENST00000534281.1@RNF141	ENST00000534281.1	protein_coding	10511923	10517740	Gene ID= ENSG00000110315.6 TPM= 7.97 Transcript Type= retained_intron
chr11	10511678	10541217	10511678	10541217	-	ENST00000265981.6@RNF141	ENST00000265981.6	protein_coding	10541122,10534016,10530643,10525192,10519034,10511678	10541217,10534205,10530751,10525373,10519141,10515066	Gene ID= ENSG00000110315.6 TPM= 4.78 Transcript Type= protein_coding
chr11	10574946	10626312	10574946	10626312	-	transcript933.chr11.nic@MRVI1	transcript933.chr11.nic	protein_coding	10625966,10623778,10609728,10606742,10604405,10603120,10600918,10594146,10593492,10591548,10581867,10580455,10574946	10626312,10623856,10609851,10606772,10604545,10603251,10601059,10594195,10593599,10591612,10581986,10580589,10576575	Gene ID= ENSG00000072952.18 TPM= 3.19 Transcript Type= NA
chr11	10751019	10774085	10751019	10774085	+	transcript937.chr11.nic@CTR9	transcript937.chr11.nic	protein_coding	10751019,10752672,10754958,10755678,10756749,10760173,10761947,10763431,10763643,10764112,10764308,10764548,10766402,10767806,10768074,10768343,10770210,10770487,10771545,10772520,10773127,10774012	10751457,10752770,10755197,10755795,10756838,10760321,10762054,10763538,10763879,10764201,10764436,10764731,10766490,10767991,10768161,10768491,10770326,10770632,10771616,10772655,10773273,10774085	Gene ID= ENSG00000198730.7 TPM= 9.56 Transcript Type= NA
chr11	10750987	10779743	10750987	10779743	+	ENST00000361367.6@CTR9	ENST00000361367.6	protein_coding	10750987,10752672,10754958,10755678,10756749,10760173,10761947,10763431,10763643,10764112,10764308,10764548,10766402,10767806,10768074,10768343,10770210,10770487,10771545,10772520,10773127,10774012,10775207,10775521,10778679	10751457,10752770,10755197,10755795,10756838,10760321,10762054,10763538,10763879,10764201,10764436,10764731,10766490,10767991,10768161,10768491,10770326,10770632,10771616,10772655,10773273,10774169,10775303,10775633,10779743	Gene ID= ENSG00000198730.7 TPM= 21.24 Transcript Type= protein_coding
chr11	10797054	10809110	10797054	10809110	-	ENST00000339995.9@EIF4G2	ENST00000339995.9	protein_coding	10808705,10807255,10806820,10805907,10804913,10804287,10804137,10803899,10803480,10803211,10803030,10802294,10802049,10801661,10800962,10800731,10800432,10800090,10799552,10799213,10798992,10797054	10809110,10807381,10806885,10806047,10805015,10804418,10804203,10804050,10803590,10803294,10803128,10802435,10802209,10801774,10801087,10800835,10800647,10800348,10799756,10799424,10799113,10797881	Gene ID= ENSG00000110321.16 TPM= 582.51 Transcript Type= protein_coding
chr11	10852704	10858073	10852704	10858073	-	ENST00000432999.6@ZBED5	ENST00000432999.6	protein_coding	10857862,10856144,10852704	10858073,10856257,10855118	Gene ID= ENSG00000236287.7 TPM= 1.06 Transcript Type= protein_coding
chr11	10854408	10855895	10854408	10855895	+	transcript970.chr11.nnic@NA	transcript970.chr11.nnic	NA	10854408	10855895	Gene ID= novel_gene_chr11_971 TPM= 3.19 Transcript Type= NA
chr11	10858259	10879276	10858259	10879276	+	ENST00000501079.5@ZBED5-AS1	ENST00000501079.5	antisense_RNA	10858259,10865261,10878381	10858366,10865327,10879276	Gene ID= ENSG00000247271.6 TPM= 6.37 Transcript Type= antisense_RNA
chr11	10867986	10870323	10867986	10870323	-	transcript972.chr11.nnic@NA	transcript972.chr11.nnic	NA	10867986	10870323	Gene ID= novel_gene_chr11_973 TPM= 3.19 Transcript Type= NA
chr11	11247355	11622011	11247355	11622011	-	transcript976.chr11.nnic@GALNT18	transcript976.chr11.nnic	protein_coding	11621359,11448744,11432621,11379081,11377182,11372515,11340819,11332694,11327086,11293029,11271044,11247355	11622011,11448936,11432787,11379264,11377379,11372629,11341004,11332831,11327181,11293193,11271290,11247556	Gene ID= ENSG00000110328.5 TPM= 2.12 Transcript Type= NA
chr11	11270876	11622009	11270876	11622009	-	transcript981.chr11.nnic@GALNT18	transcript981.chr11.nnic	protein_coding	11621359,11448744,11432621,11379081,11377182,11372515,11332694,11327086,11293029,11270876	11622009,11448936,11432787,11379264,11377379,11372629,11332831,11327181,11293193,11271290	Gene ID= ENSG00000110328.5 TPM= 8.5 Transcript Type= NA
chr11	11365020	11622002	11365020	11622002	-	transcript986.chr11.nnic@GALNT18	transcript986.chr11.nnic	protein_coding	11621359,11448744,11432621,11379081,11377182,11372515,11365020	11622002,11448936,11432787,11379264,11377379,11372629,11365443	Gene ID= ENSG00000110328.5 TPM= 2.12 Transcript Type= NA
chr11	11270876	11622005	11270876	11622005	-	ENST00000227756.4@GALNT18	ENST00000227756.4	protein_coding	11621359,11448744,11432621,11379081,11377182,11372515,11340819,11332694,11327086,11293029,11270876	11622005,11448936,11432787,11379264,11377379,11372629,11341004,11332831,11327181,11293193,11271290	Gene ID= ENSG00000110328.5 TPM= 77.54 Transcript Type= protein_coding
chr11	11567055	11569261	11567055	11569261	+	transcript988.chr11.nnic@NA	transcript988.chr11.nnic	NA	11567055	11569261	Gene ID= novel_gene_chr11_989 TPM= 3.19 Transcript Type= NA
chr11	11616006	11622017	11616006	11622017	-	transcript990.chr11.nnic@NA	transcript990.chr11.nnic	NA	11616006	11622017	Gene ID= novel_gene_chr11_991 TPM= 6.37 Transcript Type= NA
chr11	11841423	11959323	11841423	11959323	+	ENST00000339865.9@USP47	ENST00000339865.9	protein_coding	11841423,11884467,11891968,11897597,11902715,11903263,11905399,11920156,11920342,11922724,11929434,11930044,11930696,11933004,11933831,11936303,11938257,11940429,11942335,11947945,11948478,11949889,11950364,11952741,11954897,11955034,11956001	11842224,11884580,11892106,11897693,11902860,11903342,11905548,11920251,11920494,11922891,11929565,11930120,11930751,11933116,11933935,11936510,11938372,11940548,11943112,11948120,11948558,11950004,11950482,11952871,11954944,11955164,11959323	Gene ID= ENSG00000170242.17 TPM= 3.19 Transcript Type= protein_coding
chr11	11841953	11942957	11841953	11942957	+	transcript1013.chr11.nic@USP47	transcript1013.chr11.nic	protein_coding	11841953,11873800,11880177,11884467,11891968,11897597,11902715,11903263,11905399,11920156,11920342,11922724,11929434,11930044,11930696,11933004,11933831,11936303,11938257,11940429,11942335	11842224,11873859,11880380,11884580,11892106,11897693,11902860,11903342,11905548,11920251,11920494,11922891,11929565,11930120,11930751,11933116,11933935,11936510,11938372,11940548,11942957	Gene ID= ENSG00000170242.17 TPM= 4.6 Transcript Type= NA
chr11	11841742	11942957	11841742	11942957	+	transcript1015.chr11.nic@USP47	transcript1015.chr11.nic	protein_coding	11841742,11880177,11884467,11891968,11897597,11902715,11903263,11905399,11920156,11920342,11922724,11929434,11930044,11930696,11933004,11933831,11936303,11938257,11940429,11942335	11842224,11880380,11884580,11892106,11897693,11902860,11903342,11905548,11920251,11920494,11922891,11929565,11930120,11930751,11933116,11933935,11936510,11938372,11940548,11942957	Gene ID= ENSG00000170242.17 TPM= 24.78 Transcript Type= NA
chr11	11841975	11956421	11841975	11956421	+	ENST00000527733.5@USP47	ENST00000527733.5	protein_coding	11841975,11880177,11884467,11891968,11897597,11902715,11903263,11905399,11920156,11920342,11922724,11929434,11930044,11930696,11933004,11933831,11936303,11938257,11940429,11942335,11947945,11948478,11949889,11950364,11952741,11954897,11955034,11956001	11842224,11880380,11884580,11892106,11897693,11902860,11903342,11905548,11920251,11920494,11922891,11929565,11930120,11930751,11933116,11933935,11936510,11938372,11940548,11943112,11948120,11948558,11950004,11950482,11952871,11954944,11955164,11956421	Gene ID= ENSG00000170242.17 TPM= 42.84 Transcript Type= protein_coding
chr11	11963106	12009377	11963106	12009377	-	transcript1046.chr11.nic@DKK3	transcript1046.chr11.nic	protein_coding	12009039,12008370,12002300,11998696,11968395,11966954,11965809,11963106	12009377,12008608,12002437,11998779,11968487,11967098,11965965,11964686	Gene ID= ENSG00000050165.17 TPM= 323.24 Transcript Type= NA
chr11	11963106	12009370	11963106	12009370	-	ENST00000326932.8@DKK3	ENST00000326932.8	protein_coding	12009172,12008370,12002300,11998696,11968395,11966954,11965809,11963106	12009370,12008608,12002437,11998779,11968487,11967098,11965965,11964686	Gene ID= ENSG00000050165.17 TPM= 1733.26 Transcript Type= protein_coding
chr11	11963106	12008665	11963106	12008665	-	transcript1066.chr11.nic@DKK3	transcript1066.chr11.nic	protein_coding	12008370,12002300,11998696,11968395,11966954,11965809,11963106	12008665,12002437,11998779,11968487,11967098,11965965,11964686	Gene ID= ENSG00000050165.17 TPM= 788.46 Transcript Type= NA
chr11	11963106	12009082	11963106	12009082	-	ENST00000396505.6@DKK3	ENST00000396505.6	protein_coding	12008870,12008370,12002300,11998696,11968395,11966954,11965809,11963106	12009082,12008608,12002437,11998779,11968487,11967098,11965965,11964686	Gene ID= ENSG00000050165.17 TPM= 346.6 Transcript Type= protein_coding
chr11	12110550	12263785	12110550	12263785	+	transcript1114.chr11.nic@MICAL2	transcript1114.chr11.nic	protein_coding	12110550,12138390,12162079,12204250,12208023,12209497,12213255,12216219,12220201,12221644,12222617,12223411,12224673,12226171,12227025,12236177,12239436,12241040,12242214,12242671,12243987,12255643,12256785,12258468,12259795,12262480,12263560	12110726,12138460,12162419,12204457,12208139,12209598,12213410,12216319,12220458,12221759,12222743,12223501,12224820,12226370,12227131,12236245,12239585,12241162,12242432,12242772,12244112,12255750,12256971,12258556,12259897,12262537,12263785	Gene ID= ENSG00000133816.13 TPM= 19.72 Transcript Type= NA
chr11	12110550	12244243	12110550	12244243	+	transcript1122.chr11.nic@MICAL2	transcript1122.chr11.nic	protein_coding	12110550,12138390,12162079,12204250,12208023,12209497,12213255,12216219,12220201,12221644,12222617,12223411,12224673,12226171,12227025,12236177,12239436,12241040,12242214,12242671,12243987	12110726,12138460,12162419,12204457,12208139,12209598,12213410,12216319,12220458,12221759,12222743,12223501,12224820,12226370,12227131,12236245,12239585,12241162,12242432,12242772,12244243	Gene ID= ENSG00000133816.13 TPM= 3.93 Transcript Type= NA
chr11	12254912	12263785	12254912	12263785	+	transcript1125.chr11.nic@MICAL2	transcript1125.chr11.nic	protein_coding	12254912,12256785,12258468,12259795	12255750,12256971,12258556,12263785	Gene ID= ENSG00000133816.13 TPM= 5.84 Transcript Type= NA
chr11	12253234	12263782	12253234	12263782	+	ENST00000530021.5@MICAL2	ENST00000530021.5	protein_coding	12253234,12258468,12259795,12262480	12256971,12258556,12259897,12263782	Gene ID= ENSG00000133816.13 TPM= 20.92 Transcript Type= retained_intron
chr11	12110591	12263785	12110591	12263785	+	ENST00000256194.8@MICAL2	ENST00000256194.8	protein_coding	12110591,12138390,12162079,12204250,12208023,12209497,12213255,12216219,12220201,12221644,12222617,12223411,12224673,12226171,12227025,12236177,12239436,12241040,12242214,12242671,12243987,12249184,12255643,12256785,12258468,12259795,12262480,12263560	12110726,12138464,12162419,12204457,12208139,12209598,12213410,12216319,12220458,12221759,12222743,12223501,12224820,12226370,12227131,12236245,12239585,12241162,12242432,12242772,12244112,12249246,12255750,12256971,12258556,12259897,12262537,12263785	Gene ID= ENSG00000133816.13 TPM= 73.18 Transcript Type= protein_coding
chr11	12377185	12530801	12377185	12530801	+	ENST00000334956.12@PARVA	ENST00000334956.12	protein_coding	12377185,12473745,12473913,12477847,12496458,12504314,12508584,12511514,12513299,12513997,12517610,12518445,12527849	12377783,12473834,12473983,12477949,12496598,12504429,12508642,12511533,12513360,12514065,12517711,12518517,12530801	Gene ID= ENSG00000197702.11 TPM= 56.29 Transcript Type= protein_coding
chr11	12509077	12512260	12509077	12512260	-	transcript1140.chr11.nnic@NA	transcript1140.chr11.nnic	NA	12509077	12512260	Gene ID= novel_gene_chr11_1141 TPM= 9.56 Transcript Type= NA
chr11	12532828	12535328	12532828	12535328	+	transcript1136.chr11.nnic@NA	transcript1136.chr11.nnic	NA	12532828	12535328	Gene ID= novel_gene_chr11_1137 TPM= 9.56 Transcript Type= NA
chr11	12674415	12938034	12674415	12938034	+	transcript1143.chr11.nnic@TEAD1	transcript1143.chr11.nnic	protein_coding	12674415,12675409,12764179,12862250,12864686,12864838,12878889,12879708,12881005,12881896,12883001,12901940,12924912,12930174,12937109	12674834,12675561,12764434,12862314,12864748,12864900,12878900,12879842,12881051,12881957,12883125,12902113,12925052,12930326,12938034	Gene ID= ENSG00000187079.16 TPM= 5.84 Transcript Type= NA
chr11	12674483	12938034	12674483	12938034	+	transcript1145.chr11.nic@TEAD1	transcript1145.chr11.nic	protein_coding	12674483,12675409,12764179,12862250,12864838,12878889,12879708,12881005,12881896,12883001,12901940,12924912,12930174,12937109	12674834,12675561,12764434,12862314,12864900,12878900,12879842,12881051,12881957,12883125,12902113,12925052,12930326,12938034	Gene ID= ENSG00000187079.16 TPM= 2.12 Transcript Type= NA
chr11	12674428	12938034	12674428	12938034	+	transcript1148.chr11.nnic@TEAD1	transcript1148.chr11.nnic	protein_coding	12674428,12764179,12862250,12864686,12864838,12878889,12879708,12881005,12881896,12883001,12901940,12924912,12930174,12937109	12674834,12764434,12862314,12864748,12864900,12878900,12879842,12881051,12881957,12883125,12902113,12925052,12930326,12938034	Gene ID= ENSG00000187079.16 TPM= 2.12 Transcript Type= NA
chr11	12674428	12938034	12674428	12938034	+	transcript1153.chr11.nic@TEAD1	transcript1153.chr11.nic	protein_coding	12674428,12764179,12862250,12864838,12878889,12879708,12881005,12881896,12883001,12901940,12924912,12930174,12937109	12674834,12764434,12862314,12864900,12878900,12879842,12881051,12881957,12883125,12902113,12925052,12930326,12938034	Gene ID= ENSG00000187079.16 TPM= 2.12 Transcript Type= NA
chr11	12828680	12831241	12828680	12831241	-	transcript1167.chr11.nnic@NA	transcript1167.chr11.nnic	NA	12828680	12831241	Gene ID= novel_gene_chr11_1168 TPM= 4.25 Transcript Type= NA
chr11	12938800	12944736	12938800	12944736	+	transcript1159.chr11.nnic@NA	transcript1159.chr11.nnic	NA	12938800	12944736	Gene ID= novel_gene_chr11_1160 TPM= 38.24 Transcript Type= NA
chr11	13388024	13463297	13388024	13463297	-	transcript1173.chr11.nnic@BTBD10	transcript1173.chr11.nnic	protein_coding	13463092,13421642,13419460,13417158,13413530,13405659,13403911,13403168,13388024	13463297,13421838,13419745,13417260,13413650,13405856,13404015,13403278,13389141	Gene ID= ENSG00000148925.10 TPM= 4.25 Transcript Type= NA
chr11	13388001	13463280	13388001	13463280	-	ENST00000278174.9@BTBD10	ENST00000278174.9	protein_coding	13463092,13445024,13421642,13419460,13417158,13413530,13405659,13403168,13388001	13463280,13445181,13421838,13419745,13417260,13413650,13405856,13403278,13389141	Gene ID= ENSG00000148925.10 TPM= 21.24 Transcript Type= protein_coding
chr11	13668670	13732346	13668670	13732346	+	ENST00000354817.7@FAR1	ENST00000354817.7	protein_coding	13668670,13694759,13700317,13707900,13710693,13711764,13711928,13712966,13714509,13721730,13727556,13728612	13668806,13694954,13700492,13708079,13710870,13711808,13712046,13713033,13714680,13721859,13727683,13732346	Gene ID= ENSG00000197601.12 TPM= 7.44 Transcript Type= protein_coding
chr11	14277926	14358800	14277926	14358800	-	transcript1193.chr11.nnic@RRAS2	transcript1193.chr11.nnic	protein_coding	14358763,14295768,14294760,14294471,14281602,14277926	14358800,14295873,14294862,14294579,14281720,14279424	Gene ID= ENSG00000133818.13 TPM= 11.68 Transcript Type= NA
chr11	14278750	14359184	14278750	14359184	-	ENST00000256196.8@RRAS2	ENST00000256196.8	protein_coding	14358763,14295768,14294760,14294471,14281602,14278750	14359184,14295855,14294862,14294579,14281720,14279424	Gene ID= ENSG00000133818.13 TPM= 52.05 Transcript Type= protein_coding
chr11	14338107	14339291	14338107	14339291	+	transcript1200.chr11.nnic@NA	transcript1200.chr11.nnic	NA	14338107	14339291	Gene ID= novel_gene_chr11_1201 TPM= 3.19 Transcript Type= NA
chr11	14347019	14349038	14347019	14349038	+	transcript1202.chr11.nnic@NA	transcript1202.chr11.nnic	NA	14347019	14349038	Gene ID= novel_gene_chr11_1203 TPM= 3.19 Transcript Type= NA
chr11	14457506	14499852	14457506	14499852	-	ENST00000249923.7@COPB1	ENST00000249923.7	protein_coding	14499609,14498838,14494210,14493642,14490565,14488492,14486367,14483032,14480990,14480759,14479569,14476919,14475785,14474495,14469336,14468681,14466282,14464911,14461186,14460208,14458532,14457506	14499852,14498985,14494439,14493811,14490679,14488584,14486504,14483151,14481097,14480905,14479714,14477015,14475945,14474615,14469563,14468860,14466426,14465030,14461331,14460297,14458687,14457883	Gene ID= ENSG00000129083.12 TPM= 7.08 Transcript Type= protein_coding
chr11	14457506	14499862	14457506	14499862	-	transcript1208.chr11.nic@COPB1	transcript1208.chr11.nic	protein_coding	14499742,14498838,14494210,14493642,14490565,14488492,14486367,14483032,14480990,14480759,14479569,14476919,14475785,14474495,14469336,14468681,14466282,14464911,14461186,14460208,14458532,14457506	14499862,14498985,14494439,14493811,14490679,14488584,14486504,14483151,14481097,14480905,14479714,14477015,14475945,14474615,14469563,14468860,14466426,14465030,14461331,14460297,14458687,14457883	Gene ID= ENSG00000129083.12 TPM= 12.4 Transcript Type= NA
chr11	14457550	14499895	14457550	14499895	-	ENST00000439561.6@COPB1	ENST00000439561.6	protein_coding	14499707,14498838,14494210,14493642,14490565,14488492,14486367,14483032,14480990,14480759,14479569,14476919,14475785,14474495,14469336,14468681,14466282,14464911,14461186,14460208,14458532,14457550	14499895,14498985,14494439,14493811,14490679,14488584,14486504,14483151,14481097,14480905,14479714,14477015,14475945,14474615,14469563,14468860,14466426,14465030,14461331,14460297,14458687,14457883	Gene ID= ENSG00000129083.12 TPM= 18.77 Transcript Type= protein_coding
chr11	14504876	14520380	14504876	14520380	-	transcript1214.chr11.nic@PSMA1	transcript1214.chr11.nic	protein_coding	14519873,14518997,14517880,14517642,14514403,14513817,14513570,14510872,14507656,14504876	14520380,14519041,14517981,14517745,14514491,14513887,14513699,14510951,14507766,14505248	Gene ID= ENSG00000129084.17 TPM= 7.44 Transcript Type= NA
chr11	14504876	14520338	14504876	14520338	-	transcript1216.chr11.nic@PSMA1	transcript1216.chr11.nic	protein_coding	14520193,14518997,14517880,14517642,14514403,14513817,14513570,14510872,14507656,14504876	14520338,14519041,14517981,14517745,14514491,14513887,14513699,14510951,14507766,14505248	Gene ID= ENSG00000129084.17 TPM= 5.31 Transcript Type= NA
chr11	14504876	14520696	14504876	14520696	-	ENST00000396394.6@PSMA1	ENST00000396394.6	protein_coding	14520297,14518997,14517880,14517642,14514403,14513817,14513570,14510872,14507656,14504876	14520696,14519041,14517981,14517745,14514491,14513887,14513699,14510951,14507766,14505248	Gene ID= ENSG00000129084.17 TPM= 133.83 Transcript Type= protein_coding
chr11	14504913	14520363	14504913	14520363	-	ENST00000530457.5@PSMA1	ENST00000530457.5	protein_coding	14519905,14518997,14517880,14517642,14514403,14513817,14513570,14510872,14507656,14504913	14520363,14519041,14517981,14517745,14514491,14513887,14513699,14510951,14507766,14505248	Gene ID= ENSG00000129084.17 TPM= 4.25 Transcript Type= protein_coding
chr11	14878009	14891640	14878009	14891640	-	ENST00000530609.5@CYP2R1	ENST00000530609.5	protein_coding	14891153,14885776,14880136,14879114,14878009	14891640,14885917,14880768,14879443,14878297	Gene ID= ENSG00000186104.10 TPM= 1.06 Transcript Type= nonsense_mediated_decay
chr11	16424964	16426294	16424964	16426294	+	transcript1240.chr11.nnic@NA	transcript1240.chr11.nnic	NA	16424964	16426294	Gene ID= novel_gene_chr11_1241 TPM= 11.68 Transcript Type= NA
chr11	16738401	16756223	16738401	16756223	+	ENST00000228136.8@C11orf58	ENST00000228136.8	protein_coding	16738401,16744601,16748097,16752785,16754871	16738841,16744684,16748157,16752894,16756223	Gene ID= ENSG00000110696.9 TPM= 18.06 Transcript Type= protein_coding
chr11	16740833	16742533	16740833	16742533	+	transcript1251.chr11.nnic@NA	transcript1251.chr11.nnic	NA	16740833	16742533	Gene ID= novel_gene_chr11_1252 TPM= 2.12 Transcript Type= NA
chr11	16834881	16838512	16834881	16838512	+	transcript1266.chr11.nnic@NA	transcript1266.chr11.nnic	NA	16834881	16838512	Gene ID= novel_gene_chr11_1267 TPM= 3.19 Transcript Type= NA
chr11	16974693	16975013	16974693	16975013	-	ENST00000459748.1@AC116533.1	ENST00000459748.1	processed_pseudogene	16974693	16975013	Gene ID= ENSG00000244398.1 TPM= 112.59 Transcript Type= processed_pseudogene
chr11	17074389	17077787	17074389	17077787	-	ENST00000525634.5@RPS13	ENST00000525634.5	protein_coding	17077619,17077429,17077168,17075454,17075097,17074389	17077787,17077477,17077246,17075623,17075197,17074466	Gene ID= ENSG00000110700.6 TPM= 469.83 Transcript Type= protein_coding
chr11	17074389	17077706	17074389	17077706	-	ENST00000526895.5@RPS13	ENST00000526895.5	protein_coding	17077619,17077429,17077168,17075454,17075097,17074389	17077706,17077473,17077246,17075623,17075197,17074466	Gene ID= ENSG00000110700.6 TPM= 8.85 Transcript Type= processed_transcript
chr11	17074393	17077668	17074393	17077668	-	ENST00000525828.1@RPS13	ENST00000525828.1	protein_coding	17077429,17077168,17075454,17075097,17074393	17077668,17077246,17075623,17075197,17074466	Gene ID= ENSG00000110700.6 TPM= 8.5 Transcript Type= retained_intron
chr11	17074389	17077666	17074389	17077666	-	ENST00000228140.6@RPS13	ENST00000228140.6	protein_coding	17077619,17077429,17077168,17075454,17075097,17074389	17077666,17077477,17077246,17075623,17075163,17074466	Gene ID= ENSG00000110700.6 TPM= 3.54 Transcript Type= protein_coding
chr11	17074390	17077672	17074390	17077672	-	transcript1270.chr11.nnic@NA	transcript1270.chr11.nnic	NA	17074390	17077672	Gene ID= novel_gene_chr11_1271 TPM= 6.37 Transcript Type= NA
chr11	17088249	17207991	17088249	17207991	-	transcript1273.chr11.nic@PIK3C2A	transcript1273.chr11.nic	protein_coding	17207848,17168677,17155526,17150498,17148667,17147517,17145863,17145668,17136482,17135111,17134819,17131916,17129300,17122702,17122188,17119786,17119220,17118645,17117491,17114361,17112574,17110432,17105169,17102662,17101278,17099860,17097057,17094261,17092159,17091996,17091547,17091334,17088249	17207991,17169806,17155629,17150655,17148787,17147628,17145942,17145731,17136625,17135159,17135029,17132038,17129467,17122813,17122333,17119974,17119313,17118739,17117671,17114465,17112666,17110561,17105305,17102831,17101434,17099969,17097264,17094385,17092276,17092068,17091656,17091459,17089920	Gene ID= ENSG00000011405.13 TPM= 9.56 Transcript Type= NA
chr11	17202116	17205497	17202116	17205497	+	transcript1277.chr11.nnic@NA	transcript1277.chr11.nnic	NA	17202116	17205497	Gene ID= novel_gene_chr11_1278 TPM= 8.5 Transcript Type= NA
chr11	17276705	17331523	17276705	17331523	+	transcript1288.chr11.nic@NUCB2	transcript1288.chr11.nic	protein_coding	17276705,17282789,17286634,17295324,17296104,17301744,17309572,17310825,17311193,17311872,17312028,17315386,17330127,17330902,17331412	17276828,17282943,17286717,17295467,17296211,17301870,17309675,17311010,17311283,17311930,17312120,17315475,17330297,17330983,17331523	Gene ID= ENSG00000070081.15 TPM= 7.44 Transcript Type= NA
chr11	17276705	17331862	17276705	17331862	+	transcript1316.chr11.nic@NUCB2	transcript1316.chr11.nic	protein_coding	17276705,17282789,17295324,17296104,17301744,17309572,17310825,17311193,17311872,17312028,17330127,17330902,17331412	17276828,17282943,17295467,17296211,17301870,17309675,17311010,17311283,17311930,17312120,17330297,17330983,17331862	Gene ID= ENSG00000070081.15 TPM= 5.4 Transcript Type= NA
chr11	17276741	17331390	17276741	17331390	+	ENST00000323688.10@NUCB2	ENST00000323688.10	protein_coding	17276741,17282789,17295324,17296104,17301744,17309572,17310825,17311193,17311872,17312028,17315386,17330127,17330902	17276828,17282943,17295467,17296211,17301870,17309675,17311010,17311283,17311930,17312120,17315475,17330297,17331390	Gene ID= ENSG00000070081.15 TPM= 2.21 Transcript Type= protein_coding
chr11	17276984	17310927	17276984	17310927	+	ENST00000529313.5@NUCB2	ENST00000529313.5	protein_coding	17276984,17282789,17286634,17295324,17296104,17301744,17309572,17310825	17277095,17282943,17286717,17295467,17296211,17301870,17309675,17310927	Gene ID= ENSG00000070081.15 TPM= 1.06 Transcript Type= protein_coding
chr11	17378960	17381663	17378960	17381663	+	transcript1341.chr11.nnic@NA	transcript1341.chr11.nnic	NA	17378960	17381663	Gene ID= novel_gene_chr11_1342 TPM= 2.12 Transcript Type= NA
chr11	17385859	17388659	17385859	17388659	-	ENST00000339994.4@KCNJ11	ENST00000339994.4	protein_coding	17385859	17388659	Gene ID= ENSG00000187486.5 TPM= 4.25 Transcript Type= protein_coding
chr11	17788048	18012936	17788048	18012936	-	transcript1353.chr11.nic@SERGEF	transcript1353.chr11.nic	protein_coding	18012851,18007941,18006591,18004441,18000497,17995796,17992931,17988597,17959470,17878208,17788048	18012936,18008076,18006746,18004535,18000557,17995909,17992993,17988755,17959636,17878244,17788413	Gene ID= ENSG00000129158.10 TPM= 4.25 Transcript Type= NA
chr11	17788048	18012938	17788048	18012938	-	transcript1357.chr11.nic@SERGEF	transcript1357.chr11.nic	protein_coding	18012851,18010075,18007941,18006591,18004441,18000497,17995796,17992931,17988597,17878208,17788048	18012938,18010139,18008076,18006746,18004535,18000557,17995909,17992993,17988755,17878244,17788413	Gene ID= ENSG00000129158.10 TPM= 3.19 Transcript Type= NA
chr11	17877847	18013034	17877847	18013034	-	transcript1359.chr11.nic@SERGEF	transcript1359.chr11.nic	protein_coding	18012951,18007941,18006591,18004441,18000497,17995796,17992931,17988597,17959470,17878208,17877847	18013034,18008076,18006746,18004535,18000557,17995909,17992993,17988755,17959636,17878244,17877997	Gene ID= ENSG00000129158.10 TPM= 2.12 Transcript Type= NA
chr11	17788048	18012936	17788048	18012936	-	transcript1361.chr11.nic@SERGEF	transcript1361.chr11.nic	protein_coding	18012851,18007941,18006591,18004441,18000497,17995796,17992931,17988597,17878208,17788048	18012936,18008076,18006746,18004535,18000557,17995909,17992993,17988755,17878244,17788413	Gene ID= ENSG00000129158.10 TPM= 2.12 Transcript Type= NA
chr11	17788049	18013028	17788049	18013028	-	ENST00000528200.5@SERGEF	ENST00000528200.5	protein_coding	18012951,18007941,18006591,18004441,18000497,17995796,17992931,17988597,17878208,17788049	18013028,18008076,18006746,18004535,18000557,17995909,17992993,17988755,17878244,17788413	Gene ID= ENSG00000129158.10 TPM= 3.19 Transcript Type= protein_coding
chr11	17788048	18012898	17788048	18012898	-	ENST00000527494.5@SERGEF	ENST00000527494.5	protein_coding	18012851,18007941,18006591,18004441,18000497,17999494,17995796,17992931,17988597,17878208,17788048	18012898,18008076,18006746,18004535,18000557,17999572,17995909,17992993,17988755,17878244,17788413	Gene ID= ENSG00000129158.10 TPM= 1.06 Transcript Type= nonsense_mediated_decay
chr11	17903703	17907181	17903703	17907181	+	transcript1364.chr11.nnic@NA	transcript1364.chr11.nnic	NA	17903703	17907181	Gene ID= novel_gene_chr11_1365 TPM= 3.19 Transcript Type= NA
chr11	18080345	18106104	18080345	18106104	-	transcript1367.chr11.nic@SAAL1	transcript1367.chr11.nic	protein_coding	18105907,18103233,18096771,18092245,18090434,18090175,18089330,18087143,18086866,18081411,18080345	18106104,18103346,18096854,18092324,18090493,18090290,18089510,18087225,18087054,18081503,18080491	Gene ID= ENSG00000166788.9 TPM= 3.72 Transcript Type= NA
chr11	18080292	18106091	18080292	18106091	-	ENST00000524803.5@SAAL1	ENST00000524803.5	protein_coding	18105907,18103233,18096771,18092245,18090434,18090175,18089330,18087143,18086866,18083535,18081411,18080292	18106091,18103346,18096854,18092324,18090493,18090290,18089510,18087225,18087054,18083731,18081503,18080491	Gene ID= ENSG00000166788.9 TPM= 2.66 Transcript Type= protein_coding
chr11	18266174	18269974	18266174	18269974	+	ENST00000356524.8@SAA1	ENST00000356524.8	protein_coding	18266174,18266884,18269195,18269717	18266296,18266978,18269333,18269974	Gene ID= ENSG00000173432.10 TPM= 1.06 Transcript Type= protein_coding
chr11	18278668	18322174	18278668	18322174	-	ENST00000396253.7@HPS5	ENST00000396253.7	protein_coding	18321946,18311914,18311387,18310741,18308946,18306135,18305422,18300828,18298792,18297559,18296798,18295999,18295020,18292899,18291442,18287893,18287535,18286591,18285346,18283795,18281950,18278668	18322174,18312024,18311451,18310933,18309079,18306347,18305493,18300916,18298970,18297717,18296984,18296122,18295169,18292976,18292019,18288013,18287690,18286710,18285459,18283901,18282220,18279942	Gene ID= ENSG00000110756.17 TPM= 1.06 Transcript Type= protein_coding
chr11	18322596	18367044	18322596	18367044	+	ENST00000265963.8@GTF2H1	ENST00000265963.8	protein_coding	18322596,18333060,18335754,18338109,18339564,18341261,18341528,18347588,18347832,18351881,18352329,18357952,18358525,18360615,18365783	18322740,18333228,18335946,18338274,18339657,18341410,18341607,18347715,18347919,18351969,18352446,18358042,18358640,18360707,18367044	Gene ID= ENSG00000110768.11 TPM= 6.37 Transcript Type= protein_coding
chr11	18394388	18408425	18394388	18408425	+	ENST00000422447.7@LDHA	ENST00000422447.7	protein_coding	18394388,18396819,18399431,18400837,18402840,18403694,18405449,18407117	18394636,18396968,18399548,18401010,18403013,18403811,18405572,18408425	Gene ID= ENSG00000134333.13 TPM= 315.99 Transcript Type= protein_coding
chr11	18396278	18407847	18396278	18407847	+	ENST00000379412.9@LDHA	ENST00000379412.9	protein_coding	18396278,18396819,18399431,18400837,18402840,18403694,18405449,18407117	18396610,18396968,18399548,18401010,18403013,18403811,18405572,18407847	Gene ID= ENSG00000134333.13 TPM= 80.19 Transcript Type= protein_coding
chr11	18480311	18527232	18480311	18527232	-	ENST00000251968.3@TSG101	ENST00000251968.3	protein_coding	18526775,18519519,18516099,18514678,18509542,18506857,18502486,18483870,18481630,18480311	18527232,18519603,18516164,18514841,18509665,18506923,18502577,18484072,18481869,18480635	Gene ID= ENSG00000074319.12 TPM= 151.36 Transcript Type= protein_coding
chr11	18508535	18510914	18508535	18510914	+	transcript1402.chr11.nnic@NA	transcript1402.chr11.nnic	NA	18508535	18510914	Gene ID= novel_gene_chr11_1403 TPM= 2.12 Transcript Type= NA
chr11	18567823	18570180	18567823	18570180	+	transcript1413.chr11.nnic@NA	transcript1413.chr11.nnic	NA	18567823	18570180	Gene ID= novel_gene_chr11_1414 TPM= 5.31 Transcript Type= NA
chr11	18588854	18603883	18588854	18603883	+	transcript1415.chr11.nnic@SPTY2D1-AS1	transcript1415.chr11.nnic	protein_coding	18588854,18603158,18603772	18588995,18603195,18603883	Gene ID= ENSG00000247595.4 TPM= 3.19 Transcript Type= NA
chr11	18606401	18634493	18606401	18634493	-	ENST00000336349.5@SPTY2D1	ENST00000336349.5	protein_coding	18634198,18616875,18614563,18612314,18611477,18606401	18634493,18616989,18616098,18612488,18611554,18609954	Gene ID= ENSG00000179119.14 TPM= 10.62 Transcript Type= protein_coding
chr11	18698791	18704785	18698791	18704785	+	ENST00000280734.2@TMEM86A	ENST00000280734.2	protein_coding	18698791,18700933,18701573	18698907,18701197,18704785	Gene ID= ENSG00000151117.8 TPM= 2.12 Transcript Type= protein_coding
chr11	18704305	18726180	18704305	18726180	-	ENST00000513874.5@IGSF22	ENST00000513874.5	protein_coding	18726074,18724128,18721910,18721535,18720186,18720064,18719716,18718615,18717931,18716728,18715432,18714500,18714277,18713852,18712082,18710655,18710327,18709387,18708207,18707804,18706914,18705817,18704305	18726180,18724269,18722041,18721671,18720285,18720103,18719893,18718728,18718093,18717000,18715716,18714624,18714418,18714148,18712384,18710828,18710455,18709683,18708295,18707996,18707213,18706146,18704538	Gene ID= ENSG00000179057.13 TPM= 1.06 Transcript Type= protein_coding
chr11	18727928	18791842	18727928	18791842	-	ENST00000358540.6@PTPN5	ENST00000358540.6	protein_coding	18791525,18771939,18765807,18744006,18743322,18742992,18742262,18740603,18737880,18733556,18733235,18732592,18729658,18729453,18727928	18791842,18772071,18765883,18744199,18743429,18743075,18742503,18740792,18737964,18733635,18733372,18732702,18729818,18729566,18729027	Gene ID= ENSG00000110786.17 TPM= 9.56 Transcript Type= protein_coding
chr11	19117129	19176415	19117129	19176415	+	ENST00000446113.6@ZDHHC13	ENST00000446113.6	protein_coding	19117129,19142978,19146181,19147596,19149187,19150727,19152158,19152559,19155796,19158940,19163303,19164301,19165052,19166302,19170411,19172723,19175822	19117276,19143123,19146303,19147673,19149331,19150791,19152320,19152684,19155929,19159040,19163427,19164363,19165145,19166385,19170568,19172820,19176415	Gene ID= ENSG00000177054.13 TPM= 6.9 Transcript Type= protein_coding
chr11	19117145	19176415	19117145	19176415	+	ENST00000399351.7@ZDHHC13	ENST00000399351.7	protein_coding	19117145,19146181,19147596,19149187,19150727,19152158,19152559,19155796,19158940,19163303,19164301,19165052,19166302,19170411,19172723,19175822	19117276,19146303,19147673,19149331,19150791,19152320,19152684,19155929,19159040,19163427,19164363,19165145,19166385,19170568,19172820,19176415	Gene ID= ENSG00000177054.13 TPM= 2.66 Transcript Type= protein_coding
chr11	19182030	19202042	19182030	19202042	-	ENST00000265968.7@CSRP3	ENST00000265968.7	protein_coding	19201954,19192337,19188136,19186216,19184952,19182030	19202042,19192476,19188304,19186348,19185045,19182746	Gene ID= ENSG00000129170.8 TPM= 644.26 Transcript Type= protein_coding
chr11	19228678	19234166	19228678	19234166	-	transcript1471.chr11.nnic@E2F8	transcript1471.chr11.nnic	protein_coding	19234008,19232234,19230631,19230241,19228678	19234166,19233681,19230834,19230328,19229988	Gene ID= ENSG00000129173.12 TPM= 2.12 Transcript Type= NA
chr11	19310853	19313261	19310853	19313261	+	transcript1474.chr11.nnic@NA	transcript1474.chr11.nnic	NA	19310853	19313261	Gene ID= novel_gene_chr11_1475 TPM= 2.12 Transcript Type= NA
chr11	19712836	19843776	19712836	19843776	+	transcript1485.chr11.nic@NAV2	transcript1485.chr11.nic	protein_coding	19712836,19832484,19842871	19713962,19832601,19843776	Gene ID= ENSG00000166833.19 TPM= 4.25 Transcript Type= NA
chr11	19710934	19712619	19710934	19712619	-	ENST00000603468.1@AC009549.1	ENST00000603468.1	lincRNA	19710934	19712619	Gene ID= ENSG00000270607.1 TPM= 2.12 Transcript Type= lincRNA
chr11	19711294	19714774	19711294	19714774	-	transcript1504.chr11.nnic@NA	transcript1504.chr11.nnic	NA	19711294	19714774	Gene ID= novel_gene_chr11_1505 TPM= 7.44 Transcript Type= NA
chr11	19716502	19718345	19716502	19718345	+	transcript1492.chr11.nnic@NA	transcript1492.chr11.nnic	NA	19716502	19718345	Gene ID= novel_gene_chr11_1493 TPM= 4.25 Transcript Type= NA
chr11	19736647	19739021	19736647	19739021	+	transcript1494.chr11.nnic@NA	transcript1494.chr11.nnic	NA	19736647	19739021	Gene ID= novel_gene_chr11_1495 TPM= 3.19 Transcript Type= NA
chr11	19744568	19747063	19744568	19747063	-	transcript1506.chr11.nnic@NA	transcript1506.chr11.nnic	NA	19744568	19747063	Gene ID= novel_gene_chr11_1507 TPM= 3.19 Transcript Type= NA
chr11	19777172	19778947	19777172	19778947	+	transcript1496.chr11.nnic@NA	transcript1496.chr11.nnic	NA	19777172	19778947	Gene ID= novel_gene_chr11_1497 TPM= 3.19 Transcript Type= NA
chr11	19789659	19793227	19789659	19793227	+	transcript1498.chr11.nnic@NA	transcript1498.chr11.nnic	NA	19789659	19793227	Gene ID= novel_gene_chr11_1499 TPM= 3.19 Transcript Type= NA
chr11	19844824	19847782	19844824	19847782	-	transcript1512.chr11.nnic@NA	transcript1512.chr11.nnic	NA	19844824	19847782	Gene ID= novel_gene_chr11_1513 TPM= 2.12 Transcript Type= NA
chr11	19876042	19877619	19876042	19877619	-	transcript1514.chr11.nnic@NA	transcript1514.chr11.nnic	NA	19876042	19877619	Gene ID= novel_gene_chr11_1515 TPM= 2.12 Transcript Type= NA
chr11	19877472	19883103	19877472	19883103	-	transcript1502.chr11.nnic@NA	transcript1502.chr11.nnic	NA	19877472	19883103	Gene ID= novel_gene_chr11_1503 TPM= 19.12 Transcript Type= NA
chr11	19944619	19944934	19944619	19944934	-	transcript1520.chr11.nnic@NA	transcript1520.chr11.nnic	NA	19944619	19944934	Gene ID= novel_gene_chr11_1521 TPM= 2.12 Transcript Type= NA
chr11	20008738	20010276	20008738	20010276	-	transcript1508.chr11.nnic@NA	transcript1508.chr11.nnic	NA	20008738	20010276	Gene ID= novel_gene_chr11_1509 TPM= 3.19 Transcript Type= NA
chr11	20043464	20049152	20043464	20049152	-	transcript1522.chr11.nnic@NA	transcript1522.chr11.nnic	NA	20043464	20049152	Gene ID= novel_gene_chr11_1523 TPM= 4.25 Transcript Type= NA
chr11	20043846	20049303	20043846	20049303	-	ENST00000533767.1@NAV2-AS2	ENST00000533767.1	antisense_RNA	20048974,20043846	20049303,20044297	Gene ID= ENSG00000254453.1 TPM= 54.17 Transcript Type= antisense_RNA
chr11	20046433	20049281	20046433	20049281	-	transcript1516.chr11.nnic@NA	transcript1516.chr11.nnic	NA	20046433	20049281	Gene ID= novel_gene_chr11_1517 TPM= 3.19 Transcript Type= NA
chr11	20056315	20059586	20056315	20059586	+	transcript1500.chr11.nnic@NA	transcript1500.chr11.nnic	NA	20056315	20059586	Gene ID= novel_gene_chr11_1501 TPM= 2.12 Transcript Type= NA
chr11	20363743	20383782	20363743	20383782	+	ENST00000419348.6@HTATIP2	ENST00000419348.6	protein_coding	20363743,20364237,20367174,20376580,20382178,20382980	20363912,20364432,20367281,20376717,20382239,20383782	Gene ID= ENSG00000109854.13 TPM= 22.31 Transcript Type= protein_coding
chr11	20363797	20383783	20363797	20383783	+	ENST00000451739.6@HTATIP2	ENST00000451739.6	protein_coding	20363797,20367174,20376580,20382178,20382980	20364432,20367281,20376717,20382239,20383783	Gene ID= ENSG00000109854.13 TPM= 4.25 Transcript Type= protein_coding
chr11	20387530	20509253	20387530	20509253	+	ENST00000331079.10@PRMT3	ENST00000331079.10	protein_coding	20387530,20388019,20389744,20392211,20392897,20395803,20397577,20402919,20407911,20426766,20452130,20461980,20464460,20493919,20494167,20508304	20387774,20388154,20389826,20392260,20392999,20395962,20397721,20402984,20408032,20426865,20452208,20462167,20464546,20493969,20494254,20509253	Gene ID= ENSG00000185238.12 TPM= 2.12 Transcript Type= protein_coding
chr11	22196503	22203644	22196503	22203644	-	transcript1558.chr11.nnic@NA	transcript1558.chr11.nnic	NA	22196503	22203644	Gene ID= novel_gene_chr11_1559 TPM= 11.68 Transcript Type= NA
chr11	22264026	22268840	22264026	22268840	-	transcript1560.chr11.nnic@NA	transcript1560.chr11.nnic	NA	22264026	22268840	Gene ID= novel_gene_chr11_1561 TPM= 7.44 Transcript Type= NA
chr11	22623061	22625845	22623061	22625845	-	transcript1562.chr11.nnic@NA	transcript1562.chr11.nnic	NA	22623061	22625845	Gene ID= novel_gene_chr11_1563 TPM= 7.44 Transcript Type= NA
chr11	22666615	22813055	22666615	22813055	+	ENST00000454584.6@GAS2	ENST00000454584.6	protein_coding	22666615,22674850,22685668,22726292,22737705,22749120,22755846,22811798	22666899,22675014,22685789,22726433,22737768,22749261,22755953,22813055	Gene ID= ENSG00000148935.10 TPM= 1.06 Transcript Type= protein_coding
chr11	22827245	22829890	22827245	22829890	-	transcript1580.chr11.nic@SVIP	transcript1580.chr11.nic	protein_coding	22829695,22827824,22827245	22829890,22827874,22827320	Gene ID= ENSG00000198168.8 TPM= 7.44 Transcript Type= NA
chr11	22818929	22829865	22818929	22829865	-	ENST00000354193.4@SVIP	ENST00000354193.4	protein_coding	22829695,22827824,22827207,22818929	22829865,22827874,22827320,22823133	Gene ID= ENSG00000198168.8 TPM= 1.06 Transcript Type= protein_coding
chr11	26994184	26996121	26994184	26996121	+	ENST00000318627.3@FIBIN	ENST00000318627.3	protein_coding	26994184	26996121	Gene ID= ENSG00000176971.3 TPM= 7.44 Transcript Type= protein_coding
chr11	27341408	27363248	27341408	27363248	-	transcript1585.chr11.nnic@CCDC34	transcript1585.chr11.nnic	protein_coding	27362836,27357403,27341408	27363248,27357541,27341550	Gene ID= ENSG00000109881.16 TPM= 2.12 Transcript Type= NA
chr11	27338514	27363868	27338514	27363868	-	ENST00000328697.10@CCDC34	ENST00000328697.10	protein_coding	27362836,27357403,27350332,27341392,27340696,27338514	27363868,27357541,27350439,27341550,27340837,27339035	Gene ID= ENSG00000109881.16 TPM= 2.12 Transcript Type= protein_coding
chr11	27494576	27506773	27494576	27506773	-	ENST00000278193.6@LIN7C	ENST00000278193.6	protein_coding	27506716,27501802,27501495,27499359,27494576	27506773,27501920,27501566,27499568,27498804	Gene ID= ENSG00000148943.11 TPM= 9.56 Transcript Type= protein_coding
chr11	27654893	27700488	27654893	27700488	-	ENST00000356660.8@BDNF	ENST00000356660.8	protein_coding	27700164,27654893	27700488,27658585	Gene ID= ENSG00000176697.18 TPM= 2.12 Transcript Type= protein_coding
chr11	27687115	27689679	27687115	27689679	-	transcript1604.chr11.nnic@NA	transcript1604.chr11.nnic	NA	27687115	27689679	Gene ID= novel_gene_chr11_1605 TPM= 2.12 Transcript Type= NA
chr11	28108248	28333507	28108248	28333507	+	ENST00000406787.7@METTL15	ENST00000406787.7	protein_coding	28108248,28110166,28113318,28211062,28290206,28296797,28330396	28108452,28110401,28113604,28211198,28290397,28296931,28333507	Gene ID= ENSG00000169519.20 TPM= 4.25 Transcript Type= protein_coding
chr11	29980113	29982392	29980113	29982392	-	ENST00000561816.1@LINC01616	ENST00000561816.1	lincRNA	29980113	29982392	Gene ID= ENSG00000261340.1 TPM= 1.06 Transcript Type= lincRNA
chr11	30006608	30008050	30006608	30008050	+	transcript1609.chr11.nnic@NA	transcript1609.chr11.nnic	NA	30006608	30008050	Gene ID= novel_gene_chr11_1610 TPM= 3.19 Transcript Type= NA
chr11	30323051	30338227	30323051	30338227	+	ENST00000282032.3@ARL14EP	ENST00000282032.3	protein_coding	30323051,30330886,30332866,30336567	30323202,30331374,30332993,30338227	Gene ID= ENSG00000152219.4 TPM= 29.74 Transcript Type= protein_coding
chr11	30323105	30327819	30323105	30327819	+	transcript1620.chr11.nnic@ARL14EP	transcript1620.chr11.nnic	protein_coding	30323105,30326832	30326811,30327819	Gene ID= ENSG00000152219.4 TPM= 2.12 Transcript Type= NA
chr11	30410229	30586366	30410229	30586366	-	transcript1621.chr11.nic@MPPED2	transcript1621.chr11.nic	protein_coding	30586042,30580246,30535994,30495296,30417518,30414228,30410229	30586366,30580494,30536175,30495521,30417633,30414341,30411586	Gene ID= ENSG00000066382.16 TPM= 4.25 Transcript Type= NA
chr11	30410229	30586366	30410229	30586366	-	transcript1622.chr11.nnic@MPPED2	transcript1622.chr11.nnic	protein_coding	30586042,30580246,30495296,30417518,30414228,30410229	30586366,30580494,30495521,30417633,30414341,30411586	Gene ID= ENSG00000066382.16 TPM= 2.12 Transcript Type= NA
chr11	30488673	30493606	30488673	30493606	+	transcript1624.chr11.nnic@NA	transcript1624.chr11.nnic	NA	30488673	30493606	Gene ID= novel_gene_chr11_1625 TPM= 3.19 Transcript Type= NA
chr11	31369857	31427978	31369857	31427978	+	ENST00000526042.5@DNAJC24	ENST00000526042.5	protein_coding	31369857,31370716,31414811,31421972,31426287	31369912,31370859,31414949,31422132,31427978	Gene ID= ENSG00000170946.14 TPM= 1.06 Transcript Type= nonsense_mediated_decay
chr11	31432071	31432834	31432071	31432834	+	transcript1639.chr11.nnic@NA	transcript1639.chr11.nnic	NA	31432071	31432834	Gene ID= novel_gene_chr11_1640 TPM= 2.12 Transcript Type= NA
chr11	31432401	31509574	31432401	31509574	-	ENST00000532287.5@IMMP1L	ENST00000532287.5	protein_coding	31509519,31463172,31460626,31456260,31433460,31432401	31509574,31463305,31460714,31456386,31433570,31432568	Gene ID= ENSG00000148950.9 TPM= 2.12 Transcript Type= protein_coding
chr11	31509700	31790328	31509700	31790328	+	ENST00000640961.1@ELP4	ENST00000640961.1	protein_coding	31509700,31520056,31539662,31594770,31603768,31627110,31632217,31647741,31650115,31783393	31510007,31520091,31539783,31594901,31603907,31627194,31632405,31647849,31650221,31790328	Gene ID= ENSG00000109911.18 TPM= 13.81 Transcript Type= protein_coding
chr11	33015864	33033582	33015864	33033582	+	ENST00000241051.7@DEPDC7	ENST00000241051.7	protein_coding	33015864,33025659,33027686,33028603,33031378,33032336,33032668,33032889,33033262	33016028,33026049,33027813,33028792,33031589,33032478,33032793,33032967,33033582	Gene ID= ENSG00000121690.10 TPM= 1.06 Transcript Type= protein_coding
chr11	33039417	33073563	33039417	33073563	+	ENST00000334274.8@TCP11L1	ENST00000334274.8	protein_coding	33039417,33043750,33054593,33057115,33057919,33058959,33061530,33065830,33068687,33072474	33039792,33043936,33054725,33057235,33058139,33059095,33061726,33066011,33068859,33073563	Gene ID= ENSG00000176148.15 TPM= 9.56 Transcript Type= protein_coding
chr11	33140966	33161531	33140966	33161531	-	ENST00000438862.6@CSTF3	ENST00000438862.6	protein_coding	33161299,33141885,33140966	33161531,33141986,33141762	Gene ID= ENSG00000176102.11 TPM= 3.19 Transcript Type= protein_coding
chr11	33084584	33161465	33084584	33161465	-	ENST00000323959.8@CSTF3	ENST00000323959.8	protein_coding	33161299,33141885,33141667,33108386,33107903,33105998,33105883,33105567,33103107,33102177,33099608,33099034,33098690,33096835,33096306,33092271,33090532,33086988,33085895,33085713,33084584	33161465,33141986,33141762,33108418,33108000,33106064,33105917,33105693,33103184,33102339,33099717,33099150,33098764,33096978,33096408,33092340,33090727,33087141,33085989,33085773,33085289	Gene ID= ENSG00000176102.11 TPM= 8.5 Transcript Type= protein_coding
chr11	33141465	33161491	33141465	33161491	-	ENST00000431742.2@CSTF3	ENST00000431742.2	protein_coding	33161299,33141465	33161491,33141986	Gene ID= ENSG00000176102.11 TPM= 1.06 Transcript Type= protein_coding
chr11	33257249	33347995	33257249	33347995	+	transcript1671.chr11.nic@HIPK3	transcript1671.chr11.nic	protein_coding	33257249,33286413,33328510,33337075,33338757,33339350,33340968,33341563,33347293,33347629,33347852	33257889,33287511,33328633,33337194,33338843,33339534,33341127,33341686,33347414,33347753,33347995	Gene ID= ENSG00000110422.11 TPM= 21.24 Transcript Type= NA
chr11	33257249	33329421	33257249	33329421	+	transcript1673.chr11.nic@HIPK3	transcript1673.chr11.nic	protein_coding	33257249,33286413,33328510	33257889,33287511,33329421	Gene ID= ENSG00000110422.11 TPM= 19.12 Transcript Type= NA
chr11	33708700	33736439	33708700	33736439	-	ENST00000395850.7@CD59	ENST00000395850.7	protein_coding	33736382,33722379,33717370,33708700	33736439,33722463,33717471,33710343	Gene ID= ENSG00000085063.14 TPM= 147.64 Transcript Type= protein_coding
chr11	33708865	33736445	33708865	33736445	-	ENST00000351554.7@CD59	ENST00000351554.7	protein_coding	33736382,33731424,33722379,33717370,33708865	33736445,33731468,33722463,33717471,33710343	Gene ID= ENSG00000085063.14 TPM= 55.23 Transcript Type= protein_coding
chr11	33703011	33707194	33703011	33707194	-	transcript1695.chr11.nnic@NA	transcript1695.chr11.nnic	NA	33703011	33707194	Gene ID= novel_gene_chr11_1696 TPM= 16.99 Transcript Type= NA
chr11	33704944	33706570	33704944	33706570	+	transcript1689.chr11.nnic@NA	transcript1689.chr11.nnic	NA	33704944	33706570	Gene ID= novel_gene_chr11_1690 TPM= 78.6 Transcript Type= NA
chr11	33706383	33708615	33706383	33708615	+	transcript1687.chr11.nnic@NA	transcript1687.chr11.nnic	NA	33706383	33708615	Gene ID= novel_gene_chr11_1688 TPM= 16.99 Transcript Type= NA
chr11	33731154	33735925	33731154	33735925	+	transcript1691.chr11.nnic@NA	transcript1691.chr11.nnic	NA	33731154	33735925	Gene ID= novel_gene_chr11_1692 TPM= 3.19 Transcript Type= NA
chr11	33746743	33774543	33746743	33774543	-	ENST00000448981.6@FBXO3	ENST00000448981.6	protein_coding	33774394,33770741,33768851,33758487,33755771,33754455,33751523,33750539,33748777,33746743	33774543,33770830,33769014,33758601,33755975,33754500,33751607,33750661,33748892,33747320	Gene ID= ENSG00000110429.13 TPM= 2.66 Transcript Type= protein_coding
chr11	33740946	33774516	33740946	33774516	-	ENST00000265651.7@FBXO3	ENST00000265651.7	protein_coding	33774394,33770741,33768851,33758487,33755771,33754455,33751523,33750539,33748777,33747130,33740946	33774516,33770830,33769014,33758601,33755975,33754500,33751607,33750661,33748892,33747320,33742084	Gene ID= ENSG00000110429.13 TPM= 105.68 Transcript Type= protein_coding
chr11	33765126	33767010	33765126	33767010	+	transcript1709.chr11.nnic@NA	transcript1709.chr11.nnic	NA	33765126	33767010	Gene ID= novel_gene_chr11_1710 TPM= 6.37 Transcript Type= NA
chr11	33858576	33892289	33858576	33892289	-	ENST00000257818.2@LMO2	ENST00000257818.2	protein_coding	33891795,33881824,33869710,33869346,33864602,33858576	33892289,33881887,33869987,33869586,33864817,33859575	Gene ID= ENSG00000135363.11 TPM= 9.03 Transcript Type= protein_coding
chr11	33858576	33869816	33858576	33869816	-	ENST00000395833.7@LMO2	ENST00000395833.7	protein_coding	33869346,33864602,33858576	33869816,33864817,33859575	Gene ID= ENSG00000135363.11 TPM= 15.4 Transcript Type= protein_coding
chr11	33858579	33861759	33858579	33861759	-	transcript1714.chr11.nnic@NA	transcript1714.chr11.nnic	NA	33858579	33861759	Gene ID= novel_gene_chr11_1715 TPM= 3.19 Transcript Type= NA
chr11	34051628	34099054	34051628	34099054	+	transcript1732.chr11.nic@CAPRIN1	transcript1732.chr11.nic	protein_coding	34051628,34071726,34071901,34076236,34076560,34079628,34082825,34082955,34086064,34086305,34089395,34090179,34090529,34091906,34096479,34097196,34097698	34051871,34071788,34071987,34076474,34076642,34079765,34082877,34083041,34086219,34086413,34089456,34090289,34090678,34092056,34096673,34097296,34099054	Gene ID= ENSG00000135387.20 TPM= 8.5 Transcript Type= NA
chr11	34051683	34101156	34051683	34101156	+	ENST00000341394.8@CAPRIN1	ENST00000341394.8	protein_coding	34051683,34052421,34071726,34071901,34076236,34076560,34079628,34082825,34082955,34086064,34086305,34089395,34090179,34090529,34091906,34096479,34097196,34097698,34099303	34051871,34052636,34071788,34071987,34076474,34076642,34079765,34082877,34083041,34086219,34086413,34089456,34090289,34090678,34092056,34096673,34097296,34097761,34101156	Gene ID= ENSG00000135387.20 TPM= 22.31 Transcript Type= protein_coding
chr11	34051732	34099054	34051732	34099054	+	ENST00000389645.7@CAPRIN1	ENST00000389645.7	protein_coding	34051732,34052421,34071726,34071901,34076236,34076560,34079628,34082825,34082955,34086064,34086305,34089395,34090179,34090529,34091906,34096479,34097196,34097698	34051871,34052636,34071788,34071987,34076474,34076642,34079765,34082877,34083041,34086219,34086413,34089456,34090289,34090678,34092056,34096673,34097296,34099054	Gene ID= ENSG00000135387.20 TPM= 22.31 Transcript Type= protein_coding
chr11	34084358	34085815	34084358	34085815	+	transcript1735.chr11.nnic@NA	transcript1735.chr11.nnic	NA	34084358	34085815	Gene ID= novel_gene_chr11_1736 TPM= 2.12 Transcript Type= NA
chr11	34093206	34093497	34093206	34093497	-	transcript1739.chr11.nnic@NA	transcript1739.chr11.nnic	NA	34093206	34093497	Gene ID= novel_gene_chr11_1740 TPM= 2.12 Transcript Type= NA
chr11	34102475	34102610	34102475	34102610	+	transcript1737.chr11.nnic@NA	transcript1737.chr11.nnic	NA	34102475	34102610	Gene ID= novel_gene_chr11_1738 TPM= 2.12 Transcript Type= NA
chr11	34105602	34146910	34105602	34146910	+	ENST00000257829.7@NAT10	ENST00000257829.7	protein_coding	34105602,34108211,34108742,34112052,34113716,34115823,34118180,34118396,34122459,34123762,34124302,34127463,34130813,34131381,34132125,34133026,34134319,34134512,34135175,34136642,34136978,34139191,34139385,34140400,34141089,34141719,34142275,34143445,34146084	34105792,34108333,34108833,34112223,34113838,34115884,34118294,34118503,34122592,34123855,34124400,34127599,34130937,34131531,34132221,34133142,34134420,34134586,34135291,34136775,34137026,34139287,34139495,34140572,34141208,34141817,34142348,34143528,34146910	Gene ID= ENSG00000135372.8 TPM= 14.87 Transcript Type= protein_coding
chr11	34110561	34112665	34110561	34112665	-	transcript1745.chr11.nnic@NA	transcript1745.chr11.nnic	NA	34110561	34112665	Gene ID= novel_gene_chr11_1746 TPM= 3.19 Transcript Type= NA
chr11	34150988	34358008	34150988	34358008	-	ENST00000435224.2@ABTB2	ENST00000435224.2	protein_coding	34356701,34204544,34197325,34173155,34170906,34167903,34167259,34165260,34164686,34162576,34160903,34160248,34159906,34159296,34154701,34154265,34150988	34358008,34204690,34197538,34173307,34171071,34167992,34167360,34165356,34164821,34162805,34161081,34160353,34160008,34159386,34154769,34154378,34152584	Gene ID= ENSG00000166016.5 TPM= 52.05 Transcript Type= protein_coding
chr11	34331780	34334030	34331780	34334030	+	transcript1750.chr11.nnic@NA	transcript1750.chr11.nnic	NA	34331780	34334030	Gene ID= novel_gene_chr11_1751 TPM= 4.25 Transcript Type= NA
chr11	34438925	34472062	34438925	34472062	+	ENST00000241052.4@CAT	ENST00000241052.4	protein_coding	34438925,34449192,34450988,34452077,34453090,34453801,34456011,34456665,34461251,34464105,34468288,34470958,34471368	34439079,34449363,34451098,34452207,34453194,34453926,34456202,34456817,34461389,34464235,34468395,34471041,34472062	Gene ID= ENSG00000121691.4 TPM= 75.41 Transcript Type= protein_coding
chr11	34882295	34916499	34882295	34916499	-	ENST00000395787.3@APIP	ENST00000395787.3	protein_coding	34916228,34895010,34890504,34888752,34888293,34883337,34882295	34916499,34895110,34890552,34888869,34888428,34883504,34882816	Gene ID= ENSG00000149089.12 TPM= 3.19 Transcript Type= protein_coding
chr11	34882370	34894531	34882370	34894531	-	transcript1772.chr11.nic@APIP	transcript1772.chr11.nic	protein_coding	34890504,34888752,34888293,34883337,34882370	34894531,34888869,34888428,34883504,34882816	Gene ID= ENSG00000149089.12 TPM= 5.31 Transcript Type= NA
chr11	34882370	34916351	34882370	34916351	-	ENST00000527830.1@APIP	ENST00000527830.1	protein_coding	34916228,34890504,34888752,34888293,34883337,34882370	34916351,34890552,34888869,34888428,34883504,34882816	Gene ID= ENSG00000149089.12 TPM= 8.5 Transcript Type= processed_transcript
chr11	34916130	34996122	34916130	34996122	+	ENST00000448838.7@PDHX	ENST00000448838.7	protein_coding	34916130,34931404,34947506,34957384,34960420,34966640,34970139,34978124,34984570,34992315,34994914	34916486,34931484,34947606,34957583,34960518,34966814,34970286,34978182,34984728,34992379,34996122	Gene ID= ENSG00000110435.11 TPM= 5.84 Transcript Type= protein_coding
chr11	34916572	34995971	34916572	34995971	+	ENST00000227868.8@PDHX	ENST00000227868.8	protein_coding	34916572,34931404,34947506,34957384,34960420,34966640,34970139,34978124,34984570,34992315,34994914	34916815,34931484,34947606,34957583,34960518,34966814,34970286,34978182,34984728,34992379,34995971	Gene ID= ENSG00000110435.11 TPM= 188.53 Transcript Type= protein_coding
chr11	34936771	34940676	34936771	34940676	-	transcript1777.chr11.nnic@NA	transcript1777.chr11.nnic	NA	34936771	34940676	Gene ID= novel_gene_chr11_1778 TPM= 2.12 Transcript Type= NA
chr11	34980354	34983876	34980354	34983876	-	transcript1775.chr11.nnic@NA	transcript1775.chr11.nnic	NA	34980354	34983876	Gene ID= novel_gene_chr11_1776 TPM= 3.19 Transcript Type= NA
chr11	35138870	35232402	35138870	35232402	+	ENST00000263398.10@CD44	ENST00000263398.10	protein_coding	35138870,35176575,35180274,35186832,35189835,35214852,35219316,35221654,35229129	35139370,35176740,35180407,35186900,35190065,35214914,35219387,35221732,35232402	Gene ID= ENSG00000026508.17 TPM= 32.93 Transcript Type= protein_coding
chr11	35431823	35526031	35431823	35526031	-	ENST00000619888.4@PAMR1	ENST00000619888.4	protein_coding	35525513,35494096,35492045,35474630,35470601,35468001,35441481,35439627,35435903,35434512,35431823	35526031,35494272,35492173,35474744,35470818,35468108,35441693,35439693,35436135,35434804,35432892	Gene ID= ENSG00000149090.11 TPM= 3.72 Transcript Type= protein_coding
chr11	35431823	35525623	35431823	35525623	-	ENST00000622144.4@PAMR1	ENST00000622144.4	protein_coding	35525513,35494096,35492045,35474630,35470601,35468001,35451888,35441481,35439627,35435903,35434512,35431823	35525623,35494272,35492173,35474744,35470818,35468108,35451938,35441693,35439693,35436135,35434804,35432892	Gene ID= ENSG00000149090.11 TPM= 1.59 Transcript Type= protein_coding
chr11	35618419	35620868	35618419	35620868	+	ENST00000317811.5@FJX1	ENST00000317811.5	protein_coding	35618419	35620868	Gene ID= ENSG00000179431.6 TPM= 10.62 Transcript Type= protein_coding
chr11	35807925	35811052	35807925	35811052	+	transcript1801.chr11.nnic@NA	transcript1801.chr11.nnic	NA	35807925	35811052	Gene ID= novel_gene_chr11_1802 TPM= 22.31 Transcript Type= NA
chr11	35944078	36232136	35944078	36232136	+	ENST00000315571.5@LDLRAD3	ENST00000315571.5	protein_coding	35944078,36036103,36081653,36098327,36227085,36229160	35944144,36036249,36081778,36098461,36227430,36232136	Gene ID= ENSG00000179241.12 TPM= 3.19 Transcript Type= protein_coding
chr11	36272292	36289429	36272292	36289429	-	ENST00000263401.9@COMMD9	ENST00000263401.9	protein_coding	36289362,36280712,36278477,36277089,36276137,36272292	36289429,36280837,36278616,36277123,36276240,36274772	Gene ID= ENSG00000110442.11 TPM= 2.12 Transcript Type= protein_coding
chr11	36483756	36487007	36483756	36487007	-	transcript1818.chr11.nnic@NA	transcript1818.chr11.nnic	NA	36483756	36487007	Gene ID= novel_gene_chr11_1819 TPM= 2.12 Transcript Type= NA
chr11	36594501	36659268	36594501	36659268	+	ENST00000334307.9@C11orf74	ENST00000334307.9	protein_coding	36594501,36610081,36633284,36636051,36648016,36659019	36594592,36610239,36633438,36636117,36648155,36659268	Gene ID= ENSG00000166352.15 TPM= 31.07 Transcript Type= protein_coding
chr11	36594493	36659290	36594493	36659290	+	ENST00000446510.6@C11orf74	ENST00000446510.6	protein_coding	36594493,36610081,36633284,36636051,36648016,36659019	36594761,36610239,36633438,36636117,36648155,36659290	Gene ID= ENSG00000166352.15 TPM= 3.19 Transcript Type= protein_coding
chr11	36594501	36659272	36594501	36659272	+	transcript1826.chr11.nic@C11orf74	transcript1826.chr11.nic	protein_coding	36594501,36610081,36633284,36648016,36659019	36594592,36610239,36633438,36648155,36659272	Gene ID= ENSG00000166352.15 TPM= 3.45 Transcript Type= NA
chr11	36594502	36659272	36594502	36659272	+	transcript1828.chr11.nic@C11orf74	transcript1828.chr11.nic	protein_coding	36594502,36610081,36633284,36648016,36659019	36594641,36610239,36633438,36648155,36659272	Gene ID= ENSG00000166352.15 TPM= 2.39 Transcript Type= NA
chr11	36594513	36659272	36594513	36659272	+	ENST00000347206.8@C11orf74	ENST00000347206.8	protein_coding	36594513,36610081,36648016,36659019	36594592,36610239,36648155,36659272	Gene ID= ENSG00000166352.15 TPM= 3.45 Transcript Type= protein_coding
chr11	43311972	43329352	43311972	43329352	+	transcript1842.chr11.nic@API5	transcript1842.chr11.nic	protein_coding	43311972,43318640,43320821,43321411,43321985,43323430,43326507,43328712	43312196,43318801,43320914,43321476,43322136,43323636,43327878,43329352	Gene ID= ENSG00000166181.12 TPM= 2.12 Transcript Type= NA
chr11	43311972	43325120	43311972	43325120	+	transcript1843.chr11.nic@API5	transcript1843.chr11.nic	protein_coding	43311972,43318640,43320821,43321411,43321985,43323430	43312196,43318801,43320914,43321476,43322136,43325120	Gene ID= ENSG00000166181.12 TPM= 3.19 Transcript Type= NA
chr11	43312003	43344529	43312003	43344529	+	ENST00000378852.7@API5	ENST00000378852.7	protein_coding	43312003,43318640,43320821,43321411,43321985,43323430,43326507,43327789,43328712,43329965,43330508,43335278,43335858,43342433	43312196,43318801,43320914,43321476,43322136,43323636,43326611,43327878,43328893,43330058,43330564,43335354,43335994,43344529	Gene ID= ENSG00000166181.12 TPM= 75.41 Transcript Type= protein_coding
chr11	43311989	43342664	43311989	43342664	+	ENST00000531273.5@API5	ENST00000531273.5	protein_coding	43311989,43318640,43320821,43321411,43321985,43323430,43326507,43327789,43328712,43329965,43330508,43335278,43335858,43342428	43312196,43318801,43320914,43321476,43322136,43323636,43326611,43327878,43328893,43330058,43330564,43335354,43335994,43342664	Gene ID= ENSG00000166181.12 TPM= 1.06 Transcript Type= protein_coding
chr11	43358921	43493961	43358921	43493961	+	transcript1844.chr11.nic@TTC17	transcript1844.chr11.nic	protein_coding	43358921,43379233,43389652,43391465,43391821,43396709,43397347,43397974,43399888,43401446,43403998,43405514,43405786,43407138,43407353,43414590,43436164,43443325,43444056,43448002,43450082,43451182,43490239,43492020,43493773	43359113,43379322,43389821,43391576,43391952,43396818,43397491,43398113,43400048,43401558,43404144,43405629,43405951,43407215,43407577,43414776,43436334,43443584,43444209,43448122,43450241,43451265,43490358,43492163,43493961	Gene ID= ENSG00000052841.14 TPM= 35.69 Transcript Type= NA
chr11	43358921	43446544	43358921	43446544	+	transcript1854.chr11.nic@TTC17	transcript1854.chr11.nic	protein_coding	43358921,43379233,43389652,43391465,43391821,43396709,43397347,43397974,43399888,43401446,43403998,43405514,43405786,43407138,43407353,43414590,43443325,43444056,43445931	43359113,43379322,43389821,43391576,43391952,43396818,43397491,43398113,43400048,43401558,43404144,43405629,43405951,43407215,43407577,43414776,43443584,43444209,43446544	Gene ID= ENSG00000052841.14 TPM= 2.76 Transcript Type= NA
chr11	43358921	43415449	43358921	43415449	+	transcript1858.chr11.nic@TTC17	transcript1858.chr11.nic	protein_coding	43358921,43379233,43389652,43391465,43391821,43396709,43397347,43397974,43399888,43401446,43403998,43405514,43405786,43407138,43407353,43414590	43359113,43379322,43389821,43391576,43391952,43396818,43397491,43398113,43400048,43401558,43404144,43405629,43405951,43407215,43407577,43415449	Gene ID= ENSG00000052841.14 TPM= 3.82 Transcript Type= NA
chr11	43358921	43402027	43358921	43402027	+	transcript1862.chr11.nic@TTC17	transcript1862.chr11.nic	protein_coding	43358921,43379233,43389652,43391465,43391821,43396709,43397347,43397974,43399888,43401446	43359113,43379322,43389821,43391576,43391952,43396818,43397491,43398113,43400048,43402027	Gene ID= ENSG00000052841.14 TPM= 5.31 Transcript Type= NA
chr11	43358921	43390675	43358921	43390675	+	transcript1866.chr11.nic@TTC17	transcript1866.chr11.nic	protein_coding	43358921,43379233,43389652	43359113,43379322,43390675	Gene ID= ENSG00000052841.14 TPM= 5.31 Transcript Type= NA
chr11	43358932	43446719	43358932	43446719	+	ENST00000299240.10@TTC17	ENST00000299240.10	protein_coding	43358932,43379233,43389652,43391465,43391821,43396709,43397347,43397974,43399888,43401446,43403998,43405514,43405786,43407138,43407353,43414590,43436164,43443325,43444056,43445931	43359113,43379322,43389821,43391576,43391952,43396818,43397491,43398113,43400048,43401558,43404144,43405629,43405951,43407215,43407577,43414776,43436334,43443584,43444209,43446719	Gene ID= ENSG00000052841.14 TPM= 4.89 Transcript Type= protein_coding
chr11	43680558	43856610	43680558	43856610	+	ENST00000278353.9@HSD17B12	ENST00000278353.9	protein_coding	43680558,43750911,43754046,43798320,43815437,43816347,43830976,43838317,43839999,43854715,43855144	43680987,43750957,43754121,43798427,43815501,43816391,43831010,43838398,43840064,43854864,43856610	Gene ID= ENSG00000149084.12 TPM= 141.27 Transcript Type= protein_coding
chr11	43942590	43943883	43942590	43943883	+	ENST00000617612.1@C11orf96	ENST00000617612.1	protein_coding	43942590	43943883	Gene ID= ENSG00000187479.5 TPM= 44.61 Transcript Type= protein_coding
chr11	44066268	44084214	44066268	44084214	+	ENST00000263776.8@ACCS	ENST00000263776.8	protein_coding	44066268,44067628,44071256,44073447,44074612,44075526,44077279,44077845,44078684,44079531,44081020,44081179,44083169,44083424,44083695	44066701,44067915,44071315,44073517,44074681,44075592,44077376,44077922,44078784,44079620,44081065,44081320,44083311,44083577,44084214	Gene ID= ENSG00000110455.13 TPM= 1.06 Transcript Type= protein_coding
chr11	44095549	44244932	44095549	44244932	+	ENST00000533608.5@EXT2	ENST00000533608.5	protein_coding	44095549,44107683,44109194,44114185,44124789,44126816,44130045,44171611,44197829,44206793,44232353,44234115,44236293,44244149	44095852,44108248,44109283,44114301,44124984,44126955,44130138,44171742,44198018,44206959,44232496,44234243,44236375,44244932	Gene ID= ENSG00000151348.13 TPM= 52.05 Transcript Type= protein_coding
chr11	44147777	44151147	44147777	44151147	-	transcript1888.chr11.nnic@NA	transcript1888.chr11.nnic	NA	44147777	44151147	Gene ID= novel_gene_chr11_1889 TPM= 2.12 Transcript Type= NA
chr11	44278013	44279461	44278013	44279461	-	transcript1890.chr11.nnic@NA	transcript1890.chr11.nnic	NA	44278013	44279461	Gene ID= novel_gene_chr11_1891 TPM= 2.12 Transcript Type= NA
chr11	44726922	44765766	44726922	44765766	+	transcript1912.chr11.nic@TSPAN18	transcript1912.chr11.nic	protein_coding	44726922,44764426	44727287,44765766	Gene ID= ENSG00000157570.11 TPM= 4.25 Transcript Type= NA
chr11	44727112	44931332	44727112	44931332	+	ENST00000520358.6@TSPAN18	ENST00000520358.6	protein_coding	44727112,44764426,44860328,44906407,44909705,44917972,44919214,44919817,44926674,44929131	44727287,44764512,44860469,44906479,44909899,44918046,44919312,44919999,44926757,44931332	Gene ID= ENSG00000157570.11 TPM= 50.98 Transcript Type= protein_coding
chr11	44783401	44785477	44783401	44785477	-	transcript1914.chr11.nnic@NA	transcript1914.chr11.nnic	NA	44783401	44785477	Gene ID= novel_gene_chr11_1915 TPM= 4.25 Transcript Type= NA
chr11	44788449	44791450	44788449	44791450	-	transcript1916.chr11.nnic@NA	transcript1916.chr11.nnic	NA	44788449	44791450	Gene ID= novel_gene_chr11_1917 TPM= 18.06 Transcript Type= NA
chr11	44932348	44951306	44932348	44951306	-	ENST00000616990.4@TP53I11	ENST00000616990.4	protein_coding	44950877,44938207,44937555,44937304,44936803,44935561,44932348	44951306,44938366,44937613,44937352,44936899,44935662,44935017	Gene ID= ENSG00000175274.18 TPM= 93.47 Transcript Type= protein_coding
chr11	45180702	45214713	45180702	45214713	+	transcript1923.chr11.nnic@PRDM11	transcript1923.chr11.nnic	protein_coding	45180702,45181761,45182246,45182861,45204711,45208874,45212469	45181167,45181885,45182349,45183123,45204778,45209295,45214713	Gene ID= ENSG00000019485.13 TPM= 3.19 Transcript Type= NA
chr11	45240301	45286319	45240301	45286319	-	ENST00000020926.7@SYT13	ENST00000020926.7	protein_coding	45286025,45255666,45254270,45252421,45246383,45240301	45286319,45255891,45254404,45252722,45246512,45244356	Gene ID= ENSG00000019505.7 TPM= 1.06 Transcript Type= protein_coding
chr11	45648877	45665622	45648877	45665622	-	ENST00000308064.6@CHST1	ENST00000308064.6	protein_coding	45665178,45652521,45651993,45648877	45665622,45652606,45652090,45650965	Gene ID= ENSG00000175264.7 TPM= 7.44 Transcript Type= protein_coding
chr11	45771432	45772358	45771432	45772358	+	ENST00000378779.4@DKFZp779M0652	ENST00000378779.4	lincRNA	45771432,45771993	45771714,45772358	Gene ID= ENSG00000205106.4 TPM= 2.12 Transcript Type= lincRNA
chr11	45804072	45811558	45804072	45811558	+	ENST00000442528.2@SLC35C1	ENST00000442528.2	protein_coding	45804072,45805810,45810776	45804517,45806336,45811558	Gene ID= ENSG00000181830.8 TPM= 1.06 Transcript Type= protein_coding
chr11	45804406	45813015	45804406	45813015	+	ENST00000314134.3@SLC35C1	ENST00000314134.3	protein_coding	45804406,45810776	45806336,45813015	Gene ID= ENSG00000181830.8 TPM= 18.06 Transcript Type= protein_coding
chr11	45847434	45883244	45847434	45883244	+	transcript1936.chr11.nnic@CRY2	transcript1936.chr11.nnic	protein_coding	45847434,45855982,45858731,45860848,45862060,45867612,45869506,45870053,45870330,45870842,45872092,45880914,45882149	45847705,45856090,45858873,45861032,45862148,45867752,45869817,45870204,45870532,45870934,45872233,45882057,45883244	Gene ID= ENSG00000121671.11 TPM= 8.58 Transcript Type= NA
chr11	45847434	45883247	45847434	45883247	+	transcript1940.chr11.nic@CRY2	transcript1940.chr11.nic	protein_coding	45847434,45855982,45858731,45860848,45867612,45869506,45870053,45870330,45870842,45872092,45880914	45847705,45856090,45858873,45862148,45867752,45869817,45870204,45870532,45870934,45872233,45883247	Gene ID= ENSG00000121671.11 TPM= 35.67 Transcript Type= NA
chr11	45847434	45864263	45847434	45864263	+	transcript1942.chr11.nic@CRY2	transcript1942.chr11.nic	protein_coding	45847434,45855982,45858731,45860848	45847705,45856090,45858873,45864263	Gene ID= ENSG00000121671.11 TPM= 2.39 Transcript Type= NA
chr11	45900119	45906465	45900119	45906465	+	transcript1946.chr11.nic@MAPK8IP1	transcript1946.chr11.nic	protein_coding	45900119,45901980,45902372,45903365,45903989,45904455,45904718,45904971,45905151,45905649	45900452,45902061,45903184,45903440,45904161,45904564,45904834,45905041,45905249,45906465	Gene ID= ENSG00000121653.11 TPM= 22.31 Transcript Type= NA
chr11	45910174	45918055	45910174	45918055	-	ENST00000378750.9@PEX16	ENST00000378750.9	protein_coding	45917700,45917458,45916227,45915703,45915468,45914604,45914316,45914131,45913819,45910898,45910174	45918055,45917493,45916303,45915836,45915568,45914684,45914468,45914203,45913938,45910962,45910312	Gene ID= ENSG00000121680.15 TPM= 24.43 Transcript Type= protein_coding
chr11	45932566	46121178	45932566	46121178	-	ENST00000323180.10@PHF21A	ENST00000323180.10	protein_coding	46120935,46092183,46084166,46079134,46076754,45979760,45971116,45969815,45965315,45953527,45950206,45949402,45948886,45946076,45938157,45936494,45935636,45932566	46121178,46092223,46084302,46079166,46076819,45979966,45971367,45969904,45965608,45953625,45950257,45949481,45948946,45946098,45938312,45936569,45935739,45934225	Gene ID= ENSG00000135365.15 TPM= 18.06 Transcript Type= protein_coding
chr11	45971892	45975878	45971892	45975878	-	transcript1962.chr11.nnic@NA	transcript1962.chr11.nnic	NA	45971892	45975878	Gene ID= novel_gene_chr11_1963 TPM= 2.12 Transcript Type= NA
chr11	46277661	46321422	46277661	46321422	+	ENST00000621158.4@CREB3L1	ENST00000621158.4	protein_coding	46277661,46299935,46307816,46309989,46311032,46312325,46312612,46312851,46316286,46317361,46320264,46320710	46278213,46300163,46308000,46310067,46311189,46312474,46312670,46312919,46316385,46317487,46320528,46321422	Gene ID= ENSG00000157613.10 TPM= 2.12 Transcript Type= protein_coding
chr11	46361595	46380554	46361595	46380554	+	ENST00000454345.5@DGKZ	ENST00000454345.5	protein_coding	46361595,46366244,46367291,46367652,46368005,46369494,46369941,46371313,46371487,46371704,46372075,46372428,46372617,46372771,46372961,46374157,46374399,46374604,46374766,46374934,46375432,46375851,46376066,46376328,46376524,46377073,46378198,46378457,46378991,46379203,46379469,46379831	46361706,46366984,46367399,46367747,46368079,46369550,46370009,46371384,46371603,46371775,46372170,46372510,46372677,46372884,46373101,46374235,46374454,46374666,46374839,46375045,46375631,46375951,46376145,46376397,46376564,46377212,46378229,46378500,46379111,46379236,46379568,46380554	Gene ID= ENSG00000149091.15 TPM= 37.18 Transcript Type= protein_coding
chr11	46347434	46369198	46347434	46369198	+	transcript1977.chr11.nic@DGKZ	transcript1977.chr11.nic	protein_coding	46347434,46367291,46367652,46368002	46347820,46367399,46367747,46369198	Gene ID= ENSG00000149091.15 TPM= 9.56 Transcript Type= NA
chr11	46347456	46369175	46347456	46369175	+	transcript1980.chr11.nic@DGKZ	transcript1980.chr11.nic	protein_coding	46347456,46367291,46367652	46347820,46367399,46369175	Gene ID= ENSG00000149091.15 TPM= 2.12 Transcript Type= NA
chr11	46361820	46369198	46361820	46369198	+	transcript1981.chr11.nic@DGKZ	transcript1981.chr11.nic	protein_coding	46361820,46367652,46368002	46367399,46367747,46369198	Gene ID= ENSG00000149091.15 TPM= 11.68 Transcript Type= NA
chr11	46379160	46380551	46379160	46380551	+	transcript1983.chr11.nic@DGKZ	transcript1983.chr11.nic	protein_coding	46379160,46379831	46379568,46380551	Gene ID= ENSG00000149091.15 TPM= 10.62 Transcript Type= NA
chr11	46350857	46355398	46350857	46355398	-	transcript1986.chr11.nnic@NA	transcript1986.chr11.nnic	NA	46350857	46355398	Gene ID= novel_gene_chr11_1987 TPM= 23.37 Transcript Type= NA
chr11	46377442	46378112	46377442	46378112	+	transcript1984.chr11.nnic@NA	transcript1984.chr11.nnic	NA	46377442	46378112	Gene ID= novel_gene_chr11_1985 TPM= 4.25 Transcript Type= NA
chr11	46380756	46383799	46380756	46383799	+	ENST00000405308.6@MDK	ENST00000405308.6	protein_coding	46380756,46382057,46382294,46382587,46383469	46381183,46382133,46382461,46382748,46383799	Gene ID= ENSG00000110492.15 TPM= 2.66 Transcript Type= protein_coding
chr11	46381676	46383806	46381676	46383806	+	ENST00000395566.8@MDK	ENST00000395566.8	protein_coding	46381676,46382057,46382294,46382587,46383469	46381758,46382133,46382461,46382748,46383806	Gene ID= ENSG00000110492.15 TPM= 5.84 Transcript Type= protein_coding
chr11	46396414	46593948	46396414	46593948	-	ENST00000533727.5@AMBRA1	ENST00000533727.5	protein_coding	46593828,46548246,46547817,46547113,46545604,46543975,46543252,46541945,46508191,46494124,46493608,46443488,46434849,46433474,46417913,46410276,46408513,46396414	46593948,46548500,46547875,46547296,46545776,46544041,46543398,46542981,46508370,46494204,46493708,46443598,46435037,46433628,46418052,46410368,46408706,46397943	Gene ID= ENSG00000110497.14 TPM= 4.25 Transcript Type= protein_coding
chr11	46428653	46429150	46428653	46429150	-	ENST00000467930.1@AC024293.1	ENST00000467930.1	processed_pseudogene	46428653	46429150	Gene ID= ENSG00000244313.3 TPM= 8.5 Transcript Type= processed_pseudogene
chr11	46602861	46617227	46602861	46617227	-	ENST00000326737.3@HARBI1	ENST00000326737.3	protein_coding	46617124,46615568,46602861	46617227,46616381,46603909	Gene ID= ENSG00000180423.4 TPM= 1.06 Transcript Type= protein_coding
chr11	46677489	46700602	46677489	46700602	-	transcript2006.chr11.nnic@ARHGAP1	transcript2006.chr11.nnic	protein_coding	46700551,46695975,46695660,46688165,46682051,46681293,46681011,46680640,46680487,46680205,46679648,46679365,46677489	46700602,46696156,46695755,46688260,46682178,46681379,46681109,46680747,46680563,46680282,46679776,46679468,46679225	Gene ID= ENSG00000175220.11 TPM= 4.78 Transcript Type= NA
chr11	46677080	46700599	46677080	46700599	-	ENST00000311956.8@ARHGAP1	ENST00000311956.8	protein_coding	46700551,46695975,46695660,46688173,46682051,46681293,46681011,46680640,46680487,46680205,46679648,46679365,46677080	46700599,46696156,46695755,46688260,46682182,46681379,46681109,46680747,46680563,46680282,46679776,46679468,46679225	Gene ID= ENSG00000175220.11 TPM= 404.15 Transcript Type= protein_coding
chr11	46700818	46705912	46700818	46705912	+	ENST00000311764.2@ZNF408	ENST00000311764.2	protein_coding	46700818,46701399,46702704,46702984,46704353	46701099,46701676,46702765,46703243,46705912	Gene ID= ENSG00000175213.2 TPM= 22.31 Transcript Type= protein_coding
chr11	46743540	46846311	46743540	46846311	-	transcript2017.chr11.nnic@CKAP5	transcript2017.chr11.nnic	protein_coding	46846220,46821175,46816198,46811007,46809742,46809400,46808031,46801200,46798083,46797805,46796812,46795594,46790470,46790076,46788681,46784488,46783274,46780428,46780194,46778460,46778139,46777439,46776255,46770788,46769963,46767575,46765131,46763481,46762976,46762627,46762000,46760612,46759269,46758923,46754888,46753310,46752635,46751346,46751118,46750528,46750274,46744426,46743540	46846311,46821268,46816404,46811178,46809874,46809500,46808144,46801304,46798172,46797969,46796940,46795776,46790583,46790186,46788773,46784673,46783368,46780485,46780319,46778599,46778313,46777552,46776383,46770982,46770098,46767663,46765256,46763630,46763179,46762762,46762193,46760784,46759442,46759043,46755067,46753497,46752710,46751534,46751255,46750611,46750433,46744577,46744265	Gene ID= ENSG00000175216.14 TPM= 15.93 Transcript Type= NA
chr11	46743536	46846308	46743536	46846308	-	ENST00000312055.9@CKAP5	ENST00000312055.9	protein_coding	46846220,46821175,46818310,46816198,46811007,46809742,46809400,46808031,46801200,46798083,46797805,46796812,46795594,46790470,46790076,46788681,46784488,46783274,46780428,46780194,46778460,46778139,46777439,46776255,46770788,46769963,46767575,46765131,46763481,46762976,46762627,46762000,46760612,46759269,46758923,46753310,46752635,46751346,46751118,46750528,46750274,46744426,46743536	46846308,46821268,46818503,46816404,46811178,46809874,46809500,46808144,46801304,46798172,46797969,46796940,46795776,46790583,46790186,46788773,46784673,46783368,46780485,46780319,46778599,46778313,46777552,46776383,46770982,46770098,46767663,46765256,46763630,46763179,46762762,46762193,46760784,46759442,46759043,46753497,46752710,46751534,46751255,46750611,46750433,46744577,46744265	Gene ID= ENSG00000175216.14 TPM= 6.37 Transcript Type= protein_coding
chr11	46856868	46918622	46856868	46918622	-	ENST00000378623.5@LRP4	ENST00000378623.5	protein_coding	46918328,46902783,46900262,46899863,46899387,46898904,46898558,46896869,46896210,46895884,46895166,46894589,46892973,46890277,46889944,46889411,46886325,46886091,46883871,46881702,46879126,46878907,46877199,46876744,46876466,46875804,46875456,46874800,46873375,46873100,46871525,46868988,46868600,46867979,46865119,46864448,46862606,46856868	46918622,46902929,46900378,46899976,46899503,46899032,46898677,46896994,46896335,46896018,46895291,46894819,46893129,46890494,46890120,46889533,46886533,46886172,46883976,46881903,46879315,46879038,46877339,46876830,46876637,46875966,46875681,46875103,46873593,46873234,46871633,46869132,46868713,46868114,46865186,46864535,46862747,46859315	Gene ID= ENSG00000134569.9 TPM= 9.56 Transcript Type= protein_coding
chr11	46900017	46905002	46900017	46905002	+	transcript2025.chr11.nnic@NA	transcript2025.chr11.nnic	NA	46900017,46902775	46900375,46905002	Gene ID= novel_gene_chr11_2026 TPM= 5.31 Transcript Type= NA
chr11	46936758	47162247	46936758	47162247	+	transcript2050.chr11.nnic@C11orf49	transcript2050.chr11.nnic	protein_coding	46936758,46987208,47052388,47137645,47155176,47157023,47157813,47161127,47161998	46936851,46987310,47052518,47137729,47155261,47157218,47157922,47161190,47162247	Gene ID= ENSG00000149179.13 TPM= 5.31 Transcript Type= NA
chr11	46936747	47162228	46936747	47162228	+	ENST00000278460.11@C11orf49	ENST00000278460.11	protein_coding	46936747,46987208,47052388,47137645,47155176,47157023,47157813,47161127,47161464	46936851,46987310,47052518,47137729,47155261,47157218,47157922,47161190,47162228	Gene ID= ENSG00000149179.13 TPM= 19.12 Transcript Type= protein_coding
chr11	46936779	47162245	46936779	47162245	+	ENST00000525895.5@C11orf49	ENST00000525895.5	protein_coding	46936779,47052388,47137645,47155176,47157023,47157813,47161127,47161464	46936851,47052518,47137729,47155261,47157218,47157922,47161190,47162245	Gene ID= ENSG00000149179.13 TPM= 2.12 Transcript Type= nonsense_mediated_decay
chr11	46936754	47164385	46936754	47164385	+	ENST00000378618.6@C11orf49	ENST00000378618.6	protein_coding	46936754,46987208,47052388,47137645,47155176,47157023,47157813,47161127,47164093	46936851,46987310,47052518,47137729,47155261,47157218,47157922,47161190,47164385	Gene ID= ENSG00000149179.13 TPM= 4.25 Transcript Type= protein_coding
chr11	46936778	47162247	46936778	47162247	+	ENST00000378615.7@C11orf49	ENST00000378615.7	protein_coding	46936778,46987208,47052388,47137645,47155176,47157023,47157813,47161127,47161446	46936851,46987310,47052518,47137729,47155261,47157218,47157922,47161190,47162247	Gene ID= ENSG00000149179.13 TPM= 2.12 Transcript Type= protein_coding
chr11	46936768	47162247	46936768	47162247	+	ENST00000395460.6@C11orf49	ENST00000395460.6	protein_coding	46936768,46987208,47052388,47137645,47155176,47157023,47157813,47161127	46936851,46987310,47052518,47137729,47155261,47157218,47157922,47162247	Gene ID= ENSG00000149179.13 TPM= 4.25 Transcript Type= protein_coding
chr11	47164301	47186487	47164301	47186487	-	transcript2029.chr11.nic@ARFGAP2	transcript2029.chr11.nic	protein_coding	47186349,47183004,47182674,47182403,47180455,47180186,47179411,47179159,47178894,47178366,47176782,47176516,47175851,47175182,47175015,47173759,47173426,47172281,47171664,47171426,47168123,47167909,47166760,47166506,47166268,47164301	47186487,47183069,47182764,47182559,47180690,47180341,47179586,47179279,47179030,47178487,47178046,47176634,47175923,47175313,47175098,47173840,47173482,47172333,47171800,47171557,47168251,47168043,47166886,47166599,47166386,47165502	Gene ID= ENSG00000149182.14 TPM= 143.7 Transcript Type= NA
chr11	47174407	47176868	47174407	47176868	-	ENST00000526185.5@ARFGAP2	ENST00000526185.5	protein_coding	47176782,47176516,47174407	47176868,47176634,47175923	Gene ID= ENSG00000149182.14 TPM= 2.12 Transcript Type= retained_intron
chr11	47177525	47185426	47177525	47185426	-	transcript2035.chr11.nic@PACSIN3	transcript2035.chr11.nic	protein_coding	47185266,47183004,47182674,47182403,47180455,47180186,47179411,47179159,47178894,47178366,47177525	47185426,47183069,47182764,47182559,47180690,47180341,47179586,47179279,47179030,47178487,47178046	Gene ID= ENSG00000165912.15 TPM= 59 Transcript Type= NA
chr11	47177525	47186416	47177525	47186416	-	transcript2040.chr11.nnic@PACSIN3	transcript2040.chr11.nnic	protein_coding	47186349,47183004,47182674,47182403,47180455,47180186,47179411,47179159,47178894,47178366,47177525	47186416,47183311,47182764,47182559,47180690,47180341,47179586,47179279,47179030,47178487,47178046	Gene ID= ENSG00000165912.15 TPM= 119.55 Transcript Type= NA
chr11	47177557	47186440	47177557	47186440	-	ENST00000532457.5@PACSIN3	ENST00000532457.5	protein_coding	47186349,47183004,47182674,47182403,47180455,47180186,47179411,47179155,47178894,47178366,47177557	47186440,47183069,47182764,47182559,47180690,47180341,47179586,47179279,47179027,47178487,47178046	Gene ID= ENSG00000165912.15 TPM= 195.44 Transcript Type= nonsense_mediated_decay
chr11	47185660	47187671	47185660	47187671	+	transcript2067.chr11.nnic@NA	transcript2067.chr11.nnic	NA	47185660	47187671	Gene ID= novel_gene_chr11_2068 TPM= 2.12 Transcript Type= NA
chr11	47214942	47239240	47214942	47239240	+	ENST00000256996.8@DDB2	ENST00000256996.8	protein_coding	47214942,47216336,47216858,47232814,47234573,47234757,47235270,47237837,47238138,47238800	47215263,47216472,47217049,47232959,47234672,47234934,47235412,47238001,47238183,47239240	Gene ID= ENSG00000134574.11 TPM= 8.5 Transcript Type= protein_coding
chr11	47214952	47223135	47214952	47223135	+	transcript2084.chr11.nnic@DDB2	transcript2084.chr11.nnic	protein_coding	47214952,47216336,47216858,47222379	47215263,47216472,47217049,47223135	Gene ID= ENSG00000134574.11 TPM= 2.12 Transcript Type= NA
chr11	47235928	47237666	47235928	47237666	-	transcript2087.chr11.nnic@NA	transcript2087.chr11.nnic	NA	47235928	47237666	Gene ID= novel_gene_chr11_2088 TPM= 9.56 Transcript Type= NA
chr11	47239302	47248906	47239302	47248906	-	ENST00000256997.7@ACP2	ENST00000256997.7	protein_coding	47248676,47248038,47247641,47245682,47245474,47245305,47244735,47243239,47243018,47242723,47239302	47248906,47248133,47247727,47245834,47245572,47245394,47244867,47243321,47243124,47242898,47240249	Gene ID= ENSG00000134575.9 TPM= 22.31 Transcript Type= protein_coding
chr11	47257626	47268845	47257626	47268845	+	transcript2072.chr11.nic@NR1H3	transcript2072.chr11.nic	protein_coding	47257626,47257996,47259180,47259791,47260409,47261241,47261547,47261919,47267913,47268261,47268550	47257735,47258129,47259259,47259979,47260675,47261449,47261726,47262018,47268026,47268355,47268845	Gene ID= ENSG00000025434.18 TPM= 3.19 Transcript Type= NA
chr11	47248916	47268812	47248916	47268812	+	ENST00000395397.7@NR1H3	ENST00000395397.7	protein_coding	47248916,47259791,47260409,47261241,47261547,47261919,47267913,47268261,47268550	47248999,47259979,47260675,47261449,47261726,47262018,47268026,47268355,47268812	Gene ID= ENSG00000025434.18 TPM= 1.06 Transcript Type= protein_coding
chr11	47270092	47330031	47270092	47330031	+	transcript2090.chr11.nic@MADD	transcript2090.chr11.nic	protein_coding	47270092,47273827,47274563,47275899,47276732,47278165,47278999,47281575,47282381,47282813,47284178,47284375,47284941,47285451,47286433,47289391,47289867,47290149,47290610,47293883,47295496,47295897,47308591,47308980,47309281,47309507,47311732,47315220,47323671,47324265,47324471,47326738,47328658,47329046	47270246,47273976,47275159,47276202,47276863,47278278,47279079,47281753,47282616,47282969,47284281,47284565,47285065,47285590,47286534,47289493,47290053,47290299,47290816,47293983,47295567,47296055,47308699,47309042,47309401,47309612,47311842,47315327,47323835,47324337,47324577,47326807,47328704,47330031	Gene ID= ENSG00000110514.19 TPM= 10.09 Transcript Type= NA
chr11	47270156	47330030	47270156	47330030	+	ENST00000402192.6@MADD	ENST00000402192.6	protein_coding	47270156,47273827,47274563,47275899,47276732,47278165,47278999,47281575,47282381,47282813,47284178,47284375,47284941,47285451,47286433,47289391,47289867,47290149,47290610,47293883,47295496,47295897,47308591,47309281,47309507,47311732,47315220,47323671,47324265,47324471,47326738,47328658,47329046	47270246,47273976,47275159,47276202,47276863,47278278,47279079,47281753,47282616,47282969,47284281,47284565,47285194,47285590,47286534,47289493,47290053,47290299,47290816,47293983,47295576,47296055,47308699,47309401,47309612,47311842,47315327,47323835,47324337,47324577,47326807,47328704,47330030	Gene ID= ENSG00000110514.19 TPM= 5.84 Transcript Type= protein_coding
chr11	47281852	47282636	47281852	47282636	-	transcript2181.chr11.nnic@NA	transcript2181.chr11.nnic	NA	47281852	47282636	Gene ID= novel_gene_chr11_2182 TPM= 2.12 Transcript Type= NA
chr11	47331406	47352702	47331406	47352702	-	ENST00000256993.8@MYBPC3	ENST00000256993.8	protein_coding	47352623,47351239,47350502,47350014,47349774,47348424,47347857,47347651,47347426,47346627,47346207,47343492,47343021,47342830,47342578,47341991,47341138,47341003,47339651,47339324,47338520,47337690,47337391,47335877,47335042,47333922,47333557,47333194,47332814,47332566,47332072,47331845,47331406	47352702,47351505,47350615,47350112,47349922,47348541,47347905,47347680,47347479,47346647,47346370,47343624,47343148,47342935,47342744,47342156,47341244,47341032,47339790,47339404,47338679,47337794,47337579,47336011,47335209,47334010,47333752,47333333,47332973,47332702,47332258,47331881,47331716	Gene ID= ENSG00000134571.10 TPM= 1228.65 Transcript Type= protein_coding
chr11	47331406	47342148	47331406	47342148	-	transcript2141.chr11.nnic@MYBPC3	transcript2141.chr11.nnic	protein_coding	47341961,47341138,47341003,47339651,47339324,47338520,47337690,47337391,47335877,47335042,47333922,47333557,47333194,47332814,47332566,47332072,47331845,47331406	47342148,47341244,47341032,47339790,47339404,47338679,47337794,47337579,47336011,47335209,47334010,47333752,47333333,47332973,47332702,47332258,47331881,47331716	Gene ID= ENSG00000134571.10 TPM= 655.01 Transcript Type= NA
chr11	47331410	47335914	47331410	47335914	-	transcript2179.chr11.nnic@NA	transcript2179.chr11.nnic	NA	47331410	47335914	Gene ID= novel_gene_chr11_2180 TPM= 43.55 Transcript Type= NA
chr11	47354860	47378576	47354860	47378576	-	ENST00000378538.7@SPI1	ENST00000378538.7	protein_coding	47378309,47375633,47359853,47358844,47354860	47378576,47375729,47360040,47359006,47355546	Gene ID= ENSG00000066336.11 TPM= 7.44 Transcript Type= protein_coding
chr11	47408486	47416496	47408486	47416496	+	transcript2202.chr11.nic@SLC39A13	transcript2202.chr11.nic	protein_coding	47408486,47410087,47411926,47412346,47413400,47413597,47414425,47414777,47415060,47415288	47408662,47410395,47412039,47412467,47413507,47413686,47414475,47414909,47415159,47416496	Gene ID= ENSG00000165915.13 TPM= 218.31 Transcript Type= NA
chr11	47408486	47416496	47408486	47416496	+	transcript2207.chr11.nic@SLC39A13	transcript2207.chr11.nic	protein_coding	47408486,47410087,47411926,47412346,47413400,47413597,47414425,47414777,47415060	47408662,47410395,47412039,47412467,47413507,47413686,47414475,47414909,47416496	Gene ID= ENSG00000165915.13 TPM= 28.33 Transcript Type= NA
chr11	47408629	47416501	47408629	47416501	+	ENST00000362021.8@SLC39A13	ENST00000362021.8	protein_coding	47408629,47410087,47411926,47412346,47413400,47413597,47414425,47414777,47415039,47415288	47408662,47410395,47412039,47412467,47413507,47413686,47414475,47414909,47415159,47416501	Gene ID= ENSG00000165915.13 TPM= 12.61 Transcript Type= protein_coding
chr11	47418769	47426473	47418769	47426473	-	ENST00000619920.4@PSMC3	ENST00000619920.4	protein_coding	47426205,47425867,47425121,47424607,47424429,47424046,47422830,47422574,47420631,47420264,47419116,47418769	47426473,47425950,47425246,47424711,47424491,47424183,47422973,47422722,47420727,47420409,47419197,47418945	Gene ID= ENSG00000165916.8 TPM= 280.94 Transcript Type= protein_coding
chr11	47437757	47449178	47437757	47449178	-	ENST00000298854.6@RAPSN	ENST00000298854.6	protein_coding	47448773,47447812,47442656,47441823,47441611,47441159,47438732,47437757	47449178,47448150,47442814,47441921,47441733,47441212,47438931,47438047	Gene ID= ENSG00000165917.9 TPM= 9.56 Transcript Type= protein_coding
chr11	47437765	47449180	47437765	47449180	-	transcript2225.chr11.nnic@RAPSN	transcript2225.chr11.nnic	protein_coding	47448773,47447812,47442656,47441823,47441611,47438732,47437765	47449180,47448150,47442814,47441921,47441733,47438931,47438047	Gene ID= ENSG00000165917.9 TPM= 3.19 Transcript Type= NA
chr11	47468393	47553139	47468393	47553139	-	transcript2233.chr11.nnic@CELF1	transcript2233.chr11.nnic	protein_coding	47552992,47506858,47500861,47499453,47488837,47487159,47486750,47484389,47483453,47482695,47478877,47477297,47476846,47475336,47473088,47472191,47468393	47553139,47506897,47500932,47499604,47489024,47487241,47486798,47484523,47483532,47482856,47478952,47477425,47476959,47475521,47473231,47472357,47468891	Gene ID= ENSG00000149187.18 TPM= 7.44 Transcript Type= NA
chr11	47465933	47553162	47465933	47553162	-	transcript2247.chr11.nic@CELF1	transcript2247.chr11.nic	protein_coding	47552992,47488837,47487159,47486750,47484389,47483453,47482695,47478877,47477297,47476846,47475336,47473088,47472191,47465933	47553162,47489024,47487241,47486798,47484523,47483532,47482856,47478952,47477425,47476956,47475521,47473231,47472357,47468891	Gene ID= ENSG00000149187.18 TPM= 2.12 Transcript Type= NA
chr11	47470316	47553162	47470316	47553162	-	transcript2257.chr11.nic@CELF1	transcript2257.chr11.nic	protein_coding	47552992,47488837,47487159,47486750,47484389,47483453,47482695,47478877,47477297,47476846,47475336,47473088,47472191,47470316	47553162,47489024,47487241,47486798,47484523,47483532,47482856,47478952,47477425,47476959,47475521,47473231,47472357,47472102	Gene ID= ENSG00000149187.18 TPM= 3.19 Transcript Type= NA
chr11	47470287	47553162	47470287	47553162	-	transcript2260.chr11.nic@CELF1	transcript2260.chr11.nic	protein_coding	47552992,47488837,47487159,47486750,47484389,47483453,47482695,47478877,47477297,47476846,47475336,47473088,47470287	47553162,47489024,47487241,47486798,47484523,47483532,47482856,47478952,47477425,47476956,47475521,47473231,47472357	Gene ID= ENSG00000149187.18 TPM= 2.12 Transcript Type= NA
chr11	47481103	47553162	47481103	47553162	-	transcript2263.chr11.nic@CELF1	transcript2263.chr11.nic	protein_coding	47552992,47488837,47487159,47486750,47484389,47483453,47481103	47553162,47489024,47487241,47486798,47484523,47483532,47482856	Gene ID= ENSG00000149187.18 TPM= 2.12 Transcript Type= NA
chr11	47465933	47553117	47465933	47553117	-	ENST00000310513.10@CELF1	ENST00000310513.10	protein_coding	47552992,47488837,47487159,47486750,47484389,47483453,47482695,47478877,47477297,47476846,47475336,47473088,47472191,47465933	47553117,47489024,47487241,47486798,47484523,47483532,47482856,47478940,47477425,47476956,47475521,47473231,47472357,47468891	Gene ID= ENSG00000149187.18 TPM= 28.68 Transcript Type= protein_coding
chr11	47468155	47471979	47468155	47471979	+	transcript2265.chr11.nnic@NA	transcript2265.chr11.nnic	NA	47468155	47471979	Gene ID= novel_gene_chr11_2266 TPM= 13.81 Transcript Type= NA
chr11	47579010	47584562	47579010	47584562	+	ENST00000263774.8@NDUFS3	ENST00000263774.8	protein_coding	47579010,47579269,47580525,47580835,47582088,47582349,47584314	47579158,47579334,47580622,47580984,47582213,47582468,47584562	Gene ID= ENSG00000213619.9 TPM= 221.99 Transcript Type= protein_coding
chr11	47565458	47572360	47565458	47572360	+	ENST00000534775.1@PTPMT1	ENST00000534775.1	protein_coding	47565458,47569700,47571471	47565986,47569891,47572360	Gene ID= ENSG00000110536.13 TPM= 6.37 Transcript Type= protein_coding
chr11	47565601	47571769	47565601	47571769	+	ENST00000326674.9@PTPMT1	ENST00000326674.9	protein_coding	47565601,47565906,47569700,47571471	47565796,47565986,47569891,47571769	Gene ID= ENSG00000110536.13 TPM= 26.55 Transcript Type= protein_coding
chr11	47572198	47578969	47572198	47578969	-	ENST00000395288.6@KBTBD4	ENST00000395288.6	protein_coding	47578828,47577411,47575593,47572198	47578969,47578028,47575699,47573790	Gene ID= ENSG00000123444.13 TPM= 3.19 Transcript Type= protein_coding
chr11	47572197	47578977	47572197	47578977	-	transcript2279.chr11.nic@KBTBD4	transcript2279.chr11.nic	protein_coding	47578912,47577411,47575593,47572197	47578977,47578028,47575699,47573790	Gene ID= ENSG00000123444.13 TPM= 4.25 Transcript Type= NA
chr11	47572227	47579015	47572227	47579015	-	ENST00000430070.6@KBTBD4	ENST00000430070.6	protein_coding	47578933,47577411,47575593,47572227	47579015,47578028,47575699,47573790	Gene ID= ENSG00000123444.13 TPM= 62.67 Transcript Type= protein_coding
chr11	47617316	47642623	47617316	47642623	-	ENST00000302503.7@MTCH2	ENST00000302503.7	protein_coding	47642379,47638967,47638699,47635545,47634672,47631654,47631036,47630555,47628953,47627080,47625674,47622701,47617316	47642623,47639051,47638805,47635571,47634734,47631711,47631087,47630614,47629046,47627127,47625741,47622776,47618919	Gene ID= ENSG00000109919.9 TPM= 45.67 Transcript Type= protein_coding
chr11	47618704	47642546	47618704	47642546	-	transcript2296.chr11.nnic@MTCH2	transcript2296.chr11.nnic	protein_coding	47642379,47638967,47638699,47635545,47634672,47631654,47631036,47630555,47628953,47627080,47622701,47618704	47642546,47639051,47638805,47635571,47634734,47631711,47631087,47630614,47629046,47627127,47622776,47618919	Gene ID= ENSG00000109919.9 TPM= 3.19 Transcript Type= NA
chr11	47746300	47767307	47746300	47767307	-	transcript2309.chr11.nic@FNBP4	transcript2309.chr11.nic	protein_coding	47767069,47765270,47754528,47752916,47751143,47750916,47746300	47767307,47765362,47754664,47753102,47751290,47751036,47746394	Gene ID= ENSG00000109920.12 TPM= 3.19 Transcript Type= NA
chr11	47716517	47767301	47716517	47767301	-	ENST00000263773.9@FNBP4	ENST00000263773.9	protein_coding	47767069,47765270,47754528,47752916,47751143,47750916,47746056,47743953,47736616,47734025,47732537,47731374,47724468,47724028,47722976,47719929,47716517	47767301,47765362,47754664,47753102,47751290,47751036,47746394,47744163,47736740,47734129,47732670,47731561,47724778,47724172,47723316,47720086,47717512	Gene ID= ENSG00000109920.12 TPM= 6.37 Transcript Type= protein_coding
chr11	47778087	47848467	47778087	47848467	-	ENST00000378460.6@NUP160	ENST00000378460.6	protein_coding	47848219,47847848,47840378,47839843,47837545,47836887,47835651,47822087,47821724,47819374,47818056,47815946,47815479,47813316,47812882,47812302,47812064,47808396,47807070,47806153,47804549,47803438,47801811,47798368,47798168,47797978,47797779,47792786,47791930,47788501,47788182,47786453,47784922,47783073,47780343,47778087	47848467,47847959,47840588,47840065,47837623,47837001,47835809,47822164,47821821,47819458,47818124,47816029,47815649,47813415,47813047,47812429,47812224,47808529,47807140,47806312,47804618,47803536,47801930,47798463,47798262,47798074,47797884,47792946,47791990,47788611,47788305,47786554,47785063,47783198,47780447,47779194	Gene ID= ENSG00000030066.13 TPM= 10.62 Transcript Type= protein_coding
chr11	47792012	47848334	47792012	47848334	-	ENST00000528071.5@NUP160	ENST00000528071.5	protein_coding	47848219,47847848,47840378,47839843,47837545,47836887,47835651,47822087,47821724,47819374,47818056,47815946,47815479,47813316,47812882,47812302,47812064,47808396,47807070,47806153,47804549,47803438,47801811,47798368,47798168,47797978,47797779,47792012	47848334,47847959,47840588,47840065,47837623,47837001,47835809,47822164,47821821,47819458,47818124,47816029,47815649,47813415,47813047,47812429,47812224,47808529,47807140,47806312,47804618,47803536,47801930,47798463,47798262,47798074,47797884,47792946	Gene ID= ENSG00000030066.13 TPM= 1.06 Transcript Type= protein_coding
chr11	48000142	48000760	48000142	48000760	-	transcript2331.chr11.nnic@NA	transcript2331.chr11.nnic	NA	48000142	48000760	Gene ID= novel_gene_chr11_2332 TPM= 3.19 Transcript Type= NA
chr11	57233593	57237201	57233593	57237201	-	ENST00000606794.1@APLNR	ENST00000606794.1	protein_coding	57233593	57237201	Gene ID= ENSG00000134817.10 TPM= 24.43 Transcript Type= protein_coding
chr11	57299642	57311522	57299642	57311522	-	transcript2335.chr11.nic@TNKS1BP1	transcript2335.chr11.nic	protein_coding	57311238,57308395,57302459,57302074,57301807,57300884,57300528,57299642	57311522,57310556,57302825,57302224,57301943,57301041,57300600,57300081	Gene ID= ENSG00000149115.13 TPM= 11.15 Transcript Type= NA
chr11	57299642	57324927	57299642	57324927	-	ENST00000358252.7@TNKS1BP1	ENST00000358252.7	protein_coding	57324840,57321792,57320079,57317818,57312534,57308395,57302459,57302074,57301807,57300884,57300528,57299642	57324927,57321950,57320712,57317887,57313889,57310556,57302825,57302224,57301943,57301041,57300600,57300081	Gene ID= ENSG00000149115.13 TPM= 31.33 Transcript Type= protein_coding
chr11	57327425	57335892	57327425	57335892	-	transcript2344.chr11.nic@SSRP1	transcript2344.chr11.nic	protein_coding	57335730,57335068,57334463,57333435,57332959,57332625,57332383,57332152,57331668,57330855,57330291,57330093,57328297,57327712,57327425	57335892,57335240,57334648,57333540,57333149,57332855,57332486,57332280,57331889,57330927,57330429,57330138,57328426,57327882,57327514	Gene ID= ENSG00000149136.8 TPM= 3.19 Transcript Type= NA
chr11	57326872	57330927	57326872	57330927	-	ENST00000635721.1@SSRP1	ENST00000635721.1	protein_coding	57330855,57330733,57330291,57330093,57328297,57327712,57327426,57326872	57330927,57330741,57330429,57330138,57328426,57327882,57327514,57326889	Gene ID= ENSG00000149136.8 TPM= 1.06 Transcript Type= protein_coding
chr11	57325985	57335877	57325985	57335877	-	ENST00000278412.6@SSRP1	ENST00000278412.6	protein_coding	57335730,57335068,57334463,57333435,57332959,57332625,57332383,57332152,57331668,57330855,57330291,57330093,57328297,57327712,57327426,57326703,57325985	57335877,57335240,57334648,57333540,57333149,57332855,57332486,57332280,57331889,57330927,57330429,57330138,57328426,57327882,57327514,57326889,57326478	Gene ID= ENSG00000149136.8 TPM= 32.93 Transcript Type= protein_coding
chr11	57406954	57427160	57406954	57427160	-	transcript2356.chr11.nic@SLC43A3	transcript2356.chr11.nic	protein_coding	57427062,57425989,57425541,57423982,57421297,57420972,57417748,57416573,57414933,57414615,57409935,57409175,57406954	57427160,57426352,57425670,57424028,57421373,57421064,57417887,57416670,57415106,57414731,57410121,57409298,57407896	Gene ID= ENSG00000134802.17 TPM= 10.09 Transcript Type= NA
chr11	57406956	57427121	57406956	57427121	-	ENST00000395124.5@SLC43A3	ENST00000395124.5	protein_coding	57427062,57426588,57425989,57425541,57423982,57421297,57420972,57417748,57416573,57414933,57414615,57409935,57409175,57406956	57427121,57426652,57426352,57425670,57424028,57421373,57421064,57417887,57416670,57415106,57414731,57410121,57409298,57407896	Gene ID= ENSG00000134802.17 TPM= 26.02 Transcript Type= protein_coding
chr11	57460549	57477534	57460549	57477534	+	ENST00000335099.7@RTN4RL2	ENST00000335099.7	protein_coding	57460549,57467609,57476162	57460896,57468090,57477534	Gene ID= ENSG00000186907.7 TPM= 2.12 Transcript Type= protein_coding
chr11	57460857	57468884	57460857	57468884	+	ENST00000533205.5@RTN4RL2	ENST00000533205.5	protein_coding	57460857,57467609,57468770	57460896,57468090,57468884	Gene ID= ENSG00000186907.7 TPM= 1.06 Transcript Type= protein_coding
chr11	57484534	57515786	57484534	57515786	-	ENST00000278426.7@SLC43A1	ENST00000278426.7	protein_coding	57515444,57513958,57501152,57500988,57500779,57497753,57496031,57493993,57491716,57491591,57491224,57489251,57488916,57487095,57484534	57515786,57514124,57501329,57501043,57500855,57497845,57496164,57494171,57491862,57491626,57491362,57489392,57488989,57487218,57485242	Gene ID= ENSG00000149150.8 TPM= 2.12 Transcript Type= protein_coding
chr11	57528463	57530765	57528463	57530765	-	ENST00000257245.8@TIMM10	ENST00000257245.8	protein_coding	57530658,57530119,57528463	57530765,57530234,57528918	Gene ID= ENSG00000134809.8 TPM= 5.31 Transcript Type= protein_coding
chr11	57528641	57530734	57528641	57530734	-	ENST00000525158.1@TIMM10	ENST00000525158.1	protein_coding	57530658,57530119,57528641	57530734,57530293,57528918	Gene ID= ENSG00000134809.8 TPM= 3.19 Transcript Type= protein_coding
chr11	57551662	57567807	57551662	57567807	-	ENST00000287156.8@UBE2L6	ENST00000287156.8	protein_coding	57567585,57560337,57554437,57551662	57567807,57560432,57554623,57552509	Gene ID= ENSG00000156587.15 TPM= 35.05 Transcript Type= protein_coding
chr11	57597518	57614853	57597518	57614853	+	ENST00000278407.8@SERPING1	ENST00000278407.8	protein_coding	57597518,57598249,57599879,57602035,57606010,57606408,57611717,57614328	57597722,57598321,57600377,57602169,57606213,57606547,57611936,57614853	Gene ID= ENSG00000149131.15 TPM= 52.05 Transcript Type= protein_coding
chr11	57598033	57614847	57598033	57614847	+	transcript2372.chr11.nic@SERPING1	transcript2372.chr11.nic	protein_coding	57598033,57599879,57602035,57606010,57606408,57611717,57614328	57598321,57600377,57602169,57606213,57606547,57611936,57614847	Gene ID= ENSG00000149131.15 TPM= 40.36 Transcript Type= NA
chr11	57657158	57661868	57657158	57661868	+	ENST00000533682.1@CLP1	ENST00000533682.1	protein_coding	57657158,57659455,57660765	57657860,57660082,57661868	Gene ID= ENSG00000172409.5 TPM= 14.87 Transcript Type= protein_coding
chr11	57667747	57700363	57667747	57700363	+	ENST00000527985.5@ZDHHC5	ENST00000527985.5	protein_coding	57667747,57682422,57688508,57690031,57690335,57692611,57693783,57695920,57696761,57698559,57699866	57668187,57682543,57688665,57690203,57690437,57692702,57693915,57696043,57696873,57699418,57700363	Gene ID= ENSG00000156599.10 TPM= 3.9 Transcript Type= protein_coding
chr11	57667852	57697472	57667852	57697472	+	transcript2382.chr11.nic@ZDHHC5	transcript2382.chr11.nic	protein_coding	57667852,57672021,57682422,57688508,57690031,57690335,57692611,57693783,57695920,57696761	57668187,57673194,57682543,57688665,57690203,57690437,57692702,57693915,57696043,57697472	Gene ID= ENSG00000156599.10 TPM= 2.12 Transcript Type= NA
chr11	57667857	57701182	57667857	57701182	+	transcript2384.chr11.nic@ZDHHC5	transcript2384.chr11.nic	protein_coding	57667857,57688508,57690031,57690335,57692611,57693783,57695920,57696761,57698559,57699866	57668187,57688665,57690203,57690437,57692702,57693915,57696043,57696873,57699418,57701182	Gene ID= ENSG00000156599.10 TPM= 22.49 Transcript Type= NA
chr11	57667896	57701187	57667896	57701187	+	ENST00000287169.7@ZDHHC5	ENST00000287169.7	protein_coding	57667896,57672021,57682422,57688508,57690031,57690335,57692611,57693783,57695920,57696761,57698559,57699866	57668187,57673194,57682543,57688665,57690203,57690437,57692702,57693915,57696043,57696873,57699418,57701187	Gene ID= ENSG00000156599.10 TPM= 41.6 Transcript Type= protein_coding
chr11	57703714	57712323	57703714	57712323	-	ENST00000431606.3@MED19	ENST00000431606.3	protein_coding	57711963,57704973,57704719,57704302,57703714	57712323,57705229,57704815,57704396,57704106	Gene ID= ENSG00000156603.16 TPM= 24.43 Transcript Type= protein_coding
chr11	57712607	57740973	57712607	57740973	+	ENST00000278422.8@TMX2	ENST00000278422.8	protein_coding	57712607,57737608,57737913,57738354,57738664,57738974,57739131,57740099	57712807,57737668,57738026,57738430,57738770,57739039,57739260,57740973	Gene ID= ENSG00000213593.9 TPM= 66.2 Transcript Type= protein_coding
chr11	57712614	57740969	57712614	57740969	+	ENST00000529403.1@TMX2	ENST00000529403.1	protein_coding	57712614,57737608,57737836,57738354,57738664,57738974,57739131,57740099	57712807,57737668,57738026,57738430,57738770,57739039,57739260,57740969	Gene ID= ENSG00000213593.9 TPM= 16.81 Transcript Type= nonsense_mediated_decay
chr11	57712603	57740973	57712603	57740973	+	ENST00000378312.8@TMX2	ENST00000378312.8	protein_coding	57712603,57737608,57738354,57738664,57738974,57739131,57740099	57712807,57737668,57738430,57738770,57739039,57739260,57740973	Gene ID= ENSG00000213593.9 TPM= 8.32 Transcript Type= protein_coding
chr11	57741353	57743038	57741353	57743038	+	ENST00000534355.5@SELENOH	ENST00000534355.5	protein_coding	57741353,57741809,57742117,57742863	57741717,57741954,57742247,57743038	Gene ID= ENSG00000211450.9 TPM= 83.91 Transcript Type= protein_coding
chr11	57761882	57818445	57761882	57818445	+	transcript2405.chr11.nic@CTNND1	transcript2405.chr11.nic	protein_coding	57761882,57789037,57791385,57794010,57795577,57796457,57801733,57803621,57804663,57805882,57806461,57806915,57808165,57808390,57809274,57810109,57811399,57814311,57815394,57816297	57762046,57789155,57791673,57794081,57795729,57796992,57802196,57803804,57804780,57806035,57806478,57806983,57808292,57808540,57809466,57810223,57811486,57814373,57815500,57818445	Gene ID= ENSG00000198561.13 TPM= 3.19 Transcript Type= NA
chr11	57761797	57819178	57761797	57819178	+	ENST00000358694.10@CTNND1	ENST00000358694.10	protein_coding	57761797,57789037,57791385,57794010,57795577,57796457,57801733,57803621,57804663,57805882,57806915,57808165,57808390,57809274,57810109,57811399,57814311,57815394,57816297	57762046,57789155,57791673,57794081,57795729,57796992,57802196,57803804,57804780,57806035,57806983,57808292,57808540,57809466,57810223,57811486,57814373,57815500,57819178	Gene ID= ENSG00000198561.13 TPM= 4.78 Transcript Type= protein_coding
chr11	57761797	57819178	57761797	57819178	+	ENST00000428599.6@CTNND1	ENST00000428599.6	protein_coding	57761797,57791385,57794010,57795577,57796457,57801733,57803621,57804663,57805882,57806915,57808165,57808390,57809274,57810109,57811399,57814311,57815394,57816297	57762046,57791673,57794081,57795729,57796992,57802196,57803804,57804780,57806035,57806983,57808292,57808540,57809466,57810223,57811486,57814373,57815500,57819178	Gene ID= ENSG00000198561.13 TPM= 3.72 Transcript Type= protein_coding
chr11	57799980	57817271	57799980	57817271	+	transcript2414.chr11.nnic@CTNND1	transcript2414.chr11.nnic	protein_coding	57799980,57803621,57804663,57805882,57806912,57808163,57808390,57809274,57810109,57811399,57814311,57815394,57816297	57802196,57803804,57804780,57806049,57806983,57808292,57808540,57809466,57810223,57811486,57814373,57815500,57817271	Gene ID= ENSG00000198561.13 TPM= 9.56 Transcript Type= NA
chr11	57772098	57772867	57772098	57772867	-	transcript2419.chr11.nnic@NA	transcript2419.chr11.nnic	NA	57772098	57772867	Gene ID= novel_gene_chr11_2420 TPM= 2.12 Transcript Type= NA
chr11	58526871	58578166	58526871	58578166	-	ENST00000528954.5@LPXN	ENST00000528954.5	protein_coding	58578019,58570556,58564155,58554841,58551065,58549973,58549786,58528043,58526871	58578166,58570713,58564201,58554940,58551232,58550146,58549867,58528191,58527723	Gene ID= ENSG00000110031.12 TPM= 2.12 Transcript Type= protein_coding
chr11	58579111	58621042	58579111	58621042	+	ENST00000316059.6@ZFP91	ENST00000316059.6	protein_coding	58579111,58584856,58609830,58610298,58610950,58611604,58612278,58612762,58614229,58616716,58617196	58579622,58584884,58610039,58610334,58611054,58611738,58612328,58612840,58614343,58616815,58621042	Gene ID= ENSG00000186660.14 TPM= 18.06 Transcript Type= protein_coding
chr11	58579135	58611637	58579135	58611637	+	transcript2432.chr11.nic@ZFP91-CNTF	transcript2432.chr11.nic	protein_coding	58579135,58584856,58609830,58610298,58610950,58611604	58579622,58584884,58610039,58610334,58611054,58611637	Gene ID= ENSG00000255073.8 TPM= 7.44 Transcript Type= NA
chr11	59209075	59212927	59209075	59212927	-	transcript2435.chr11.nnic@NA	transcript2435.chr11.nnic	NA	59209075	59212927	Gene ID= novel_gene_chr11_2436 TPM= 3.19 Transcript Type= NA
chr11	59574398	59616144	59574398	59616144	-	ENST00000263847.5@OSBP	ENST00000263847.5	protein_coding	59615303,59610381,59608484,59601640,59601283,59600819,59600496,59594010,59593604,59581451,59580174,59578149,59576805,59574398	59616144,59610589,59608734,59601838,59601385,59600873,59600627,59594255,59593724,59581554,59580269,59578330,59577025,59576719	Gene ID= ENSG00000110048.11 TPM= 52.05 Transcript Type= protein_coding
chr11	59574398	59615779	59574398	59615779	-	transcript2442.chr11.nic@OSBP	transcript2442.chr11.nic	protein_coding	59615303,59610381,59608484,59601640,59601283,59600819,59600496,59594010,59581451,59580174,59578149,59576805,59574398	59615779,59610589,59608734,59601838,59601385,59600873,59600627,59594255,59581554,59580269,59578330,59577025,59576719	Gene ID= ENSG00000110048.11 TPM= 11.68 Transcript Type= NA
chr11	59592800	59615809	59592800	59615809	-	transcript2444.chr11.nic@OSBP	transcript2444.chr11.nic	protein_coding	59615303,59610381,59608484,59601640,59601283,59600819,59600496,59592800	59615809,59610589,59608734,59601838,59601385,59600873,59600627,59594255	Gene ID= ENSG00000110048.11 TPM= 5.31 Transcript Type= NA
chr11	59755059	59802706	59755059	59802706	+	ENST00000337979.8@STX3	ENST00000337979.8	protein_coding	59755059,59773211,59787037,59788873,59790519,59792107,59793099,59793380,59795372,59797283,59800855	59755635,59773294,59787136,59788947,59790586,59792215,59793172,59793514,59795482,59797396,59802706	Gene ID= ENSG00000166900.16 TPM= 10.62 Transcript Type= protein_coding
chr11	59755383	59805205	59755383	59805205	+	transcript2455.chr11.nnic@STX3	transcript2455.chr11.nnic	protein_coding	59755383,59773211,59787037,59788873,59790519,59792107,59793099,59793380,59795372,59803218,59803840	59755635,59773294,59787136,59788947,59790586,59792215,59793172,59793514,59795482,59803300,59805205	Gene ID= ENSG00000166900.16 TPM= 2.12 Transcript Type= NA
chr11	59755326	59802703	59755326	59802703	+	transcript2458.chr11.nic@STX3	transcript2458.chr11.nic	protein_coding	59755326,59773211,59787037,59788873,59790519,59792107,59793099,59793380,59795372,59800855	59755635,59773294,59787136,59788947,59790586,59792215,59793172,59793514,59795712,59802703	Gene ID= ENSG00000166900.16 TPM= 3.19 Transcript Type= NA
chr11	59755406	59802706	59755406	59802706	+	transcript2462.chr11.nic@STX3	transcript2462.chr11.nic	protein_coding	59755406,59773211,59788873,59790519,59792107,59793099,59793380,59795372,59800855	59755635,59773294,59788947,59790586,59792215,59793172,59793514,59795482,59802706	Gene ID= ENSG00000166900.16 TPM= 4.25 Transcript Type= NA
chr11	59806135	59810872	59806135	59810872	-	ENST00000300151.4@MRPL16	ENST00000300151.4	protein_coding	59810604,59809855,59807701,59806135	59810872,59809920,59807849,59806832	Gene ID= ENSG00000166902.4 TPM= 159.32 Transcript Type= protein_coding
chr11	60172015	60184666	60172015	60184666	-	ENST00000530839.5@MS4A6A	ENST00000530839.5	protein_coding	60184542,60182978,60181581,60179831,60178260,60175402,60173028,60172015	60184666,60183331,60181741,60179965,60178316,60175611,60173129,60172253	Gene ID= ENSG00000110077.14 TPM= 6.37 Transcript Type= protein_coding
chr11	60172014	60183104	60172014	60183104	-	ENST00000528851.5@MS4A6A	ENST00000528851.5	protein_coding	60182978,60181581,60179831,60178260,60175402,60172014	60183104,60181741,60179965,60178316,60175611,60173129	Gene ID= ENSG00000110077.14 TPM= 1.06 Transcript Type= protein_coding
chr11	60280586	60308972	60280586	60308972	+	ENST00000337908.4@MS4A4A	ENST00000337908.4	protein_coding	60280586,60292225,60297197,60301001,60302559,60306100,60308107	60280716,60292384,60297325,60301057,60302717,60306201,60308972	Gene ID= ENSG00000110079.16 TPM= 1.06 Transcript Type= protein_coding
chr11	60842071	60851081	60842071	60851081	+	ENST00000227520.9@CCDC86	ENST00000227520.9	protein_coding	60842071,60847924,60849940,60850206	60842882,60848053,60850014,60851081	Gene ID= ENSG00000110104.11 TPM= 29.74 Transcript Type= protein_coding
chr11	60890730	60906588	60890730	60906588	-	ENST00000227524.8@PRPF19	ENST00000227524.8	protein_coding	60906364,60903712,60903459,60902740,60902583,60902403,60901499,60901295,60900854,60900582,60899149,60898862,60898541,60898101,60897846,60890730	60906588,60903861,60903535,60902881,60902656,60902465,60901540,60901369,60900929,60900691,60899304,60898931,60898626,60898271,60897951,60891263	Gene ID= ENSG00000110107.8 TPM= 7.44 Transcript Type= protein_coding
chr11	60913874	60923443	60913874	60923443	+	ENST00000227525.7@TMEM109	ENST00000227525.7	protein_coding	60913874,60919686,60920886,60921774	60914268,60919930,60920988,60923443	Gene ID= ENSG00000110108.9 TPM= 132.77 Transcript Type= protein_coding
chr11	60924481	60937159	60924481	60937159	+	ENST00000005286.8@TMEM132A	ENST00000005286.8	protein_coding	60924481,60927204,60927641,60928629,60930510,60931686,60931984,60933542,60934488,60935252,60935864	60924733,60927418,60927859,60928960,60930659,60931884,60932127,60933744,60934764,60935443,60937159	Gene ID= ENSG00000006118.14 TPM= 10.62 Transcript Type= protein_coding
chr11	61130256	61161617	61130256	61161617	-	ENST00000301765.9@VPS37C	ENST00000301765.9	protein_coding	61161391,61138737,61134036,61133255,61130256	61161617,61138835,61134207,61133337,61132539	Gene ID= ENSG00000167987.10 TPM= 38.24 Transcript Type= protein_coding
chr11	61157719	61159720	61157719	61159720	+	transcript2497.chr11.nnic@NA	transcript2497.chr11.nnic	NA	61157719	61159720	Gene ID= novel_gene_chr11_2498 TPM= 2.12 Transcript Type= NA
chr11	61258286	61295091	61258286	61295091	-	ENST00000301770.10@VWCE	ENST00000301770.10	protein_coding	61294928,61291482,61291264,61290799,61286314,61282793,61281786,61280793,61280624,61278394,61276593,61274499,61273199,61271675,61268922,61267462,61265122,61264956,61264487,61258286	61295091,61291576,61291353,61290927,61286430,61282905,61281914,61281235,61280717,61278476,61276680,61274584,61273316,61271760,61269079,61267544,61265212,61265038,61264577,61259312	Gene ID= ENSG00000167992.12 TPM= 1.06 Transcript Type= nonsense_mediated_decay
chr11	61299451	61333366	61299451	61333366	-	ENST00000301764.11@DDB1	ENST00000301764.11	protein_coding	61332908,61331543,61329958,61329363,61326779,61325611,61323979,61323011,61322296,61321595,61316492,61316285,61314308,61314047,61313862,61313499,61311989,61311784,61310295,61309796,61308983,61303865,61303046,61302582,61302257,61300809,61299451	61333366,61331691,61330074,61329584,61326893,61325708,61324137,61323094,61322412,61321697,61316567,61316393,61314486,61314210,61313969,61313706,61312084,61311895,61310418,61309960,61309077,61304035,61303155,61302751,61302359,61300932,61300219	Gene ID= ENSG00000167986.13 TPM= 195.44 Transcript Type= protein_coding
chr11	61314824	61333110	61314824	61333110	-	transcript2513.chr11.nic@DDB1	transcript2513.chr11.nic	protein_coding	61332908,61331543,61329958,61329363,61326779,61325611,61323979,61323011,61322296,61321595,61316492,61314824	61333110,61331691,61330074,61329584,61326893,61325708,61324137,61323094,61322412,61321697,61316567,61316393	Gene ID= ENSG00000167986.13 TPM= 6.37 Transcript Type= NA
chr11	61333210	61349242	61333210	61349242	+	ENST00000394900.7@TKFC	ENST00000394900.7	protein_coding	61333210,61334620,61337941,61339066,61339254,61341436,61341823,61342461,61342574,61342755,61343342,61343856,61344136,61345260,61345462,61345712,61345857,61346351	61333329,61334731,61338130,61339176,61339435,61341514,61341912,61342495,61342658,61342844,61343458,61343975,61344273,61345366,61345565,61345745,61345946,61349242	Gene ID= ENSG00000149476.15 TPM= 7.97 Transcript Type= protein_coding
chr11	61334232	61346890	61334232	61346890	+	transcript2510.chr11.nic@TKFC	transcript2510.chr11.nic	protein_coding	61334232,61337941,61339066,61339254,61341436,61341823,61342461,61342574,61342755,61343342,61343856,61344136,61345260,61345462,61345712,61345857,61346351	61334731,61338130,61339176,61339435,61341514,61341912,61342495,61342658,61342844,61343458,61343975,61344273,61345366,61345565,61345745,61345946,61346890	Gene ID= ENSG00000149476.15 TPM= 2.66 Transcript Type= NA
chr11	61348745	61362299	61348745	61362299	-	ENST00000294072.8@CYB561A3	ENST00000294072.8	protein_coding	61361733,61357733,61356530,61353784,61352985,61350991,61348745	61362299,61357828,61356728,61353992,61353139,61351147,61350422	Gene ID= ENSG00000162144.9 TPM= 2.12 Transcript Type= protein_coding
chr11	61360512	61362277	61360512	61362277	-	transcript2532.chr11.nnic@NA	transcript2532.chr11.nnic	NA	61360512	61362277	Gene ID= novel_gene_chr11_2533 TPM= 4.25 Transcript Type= NA
chr11	61362001	61369509	61362001	61369509	+	ENST00000278826.10@TMEM138	ENST00000278826.10	protein_coding	61362001,61364252,61366045,61367923,61368597	61362420,61364518,61366216,61367998,61369509	Gene ID= ENSG00000149483.11 TPM= 9.56 Transcript Type= protein_coding
chr11	61362361	61368556	61362361	61368556	+	ENST00000542946.1@TMEM138	ENST00000542946.1	protein_coding	61362361,61364252,61366045	61362420,61364518,61368556	Gene ID= ENSG00000149483.11 TPM= 1.06 Transcript Type= protein_coding
chr11	61391687	61398851	61391687	61398851	+	ENST00000515837.6@TMEM216	ENST00000515837.6	protein_coding	61391687,61393231,61393884,61397774,61398270	61392665,61393332,61393976,61397975,61398851	Gene ID= ENSG00000187049.9 TPM= 7.97 Transcript Type= protein_coding
chr11	61392360	61398863	61392360	61398863	+	ENST00000334888.9@TMEM216	ENST00000334888.9	protein_coding	61392360,61393231,61393884,61397774,61398261	61392665,61393332,61393976,61397975,61398863	Gene ID= ENSG00000187049.9 TPM= 6.9 Transcript Type= protein_coding
chr11	61402731	61430003	61402731	61430003	-	transcript2539.chr11.nic@CPSF7	transcript2539.chr11.nic	protein_coding	61429914,61429182,61421390,61420470,61419949,61416364,61416105,61415666,61411769,61410938,61402731	61430003,61429290,61421608,61420573,61420094,61416519,61416162,61415784,61411937,61411105,61404704	Gene ID= ENSG00000149532.15 TPM= 2.12 Transcript Type= NA
chr11	61402649	61430031	61402649	61430031	-	ENST00000394888.8@CPSF7	ENST00000394888.8	protein_coding	61429914,61429182,61421390,61420470,61419922,61416105,61415666,61411769,61410938,61402649	61430031,61429290,61421608,61420573,61420094,61416519,61415784,61411937,61411105,61404704	Gene ID= ENSG00000149532.15 TPM= 6.37 Transcript Type= protein_coding
chr11	61402731	61430014	61402731	61430014	-	ENST00000439958.7@CPSF7	ENST00000439958.7	protein_coding	61429914,61429182,61421390,61420470,61419949,61416105,61415666,61411769,61410938,61402731	61430014,61429290,61421608,61420573,61420094,61416519,61415784,61411937,61411105,61404704	Gene ID= ENSG00000149532.15 TPM= 7.44 Transcript Type= protein_coding
chr11	61430040	61473528	61430040	61473528	+	transcript2545.chr11.nnic@AP003108.2	transcript2545.chr11.nnic	protein_coding	61430040,61437625,61438004,61468664,61472745	61430182,61437848,61438113,61468714,61473528	Gene ID= ENSG00000256591.5 TPM= 2.12 Transcript Type= NA
chr11	61430124	61473611	61430124	61473611	+	transcript2551.chr11.nnic@AP003108.2	transcript2551.chr11.nnic	protein_coding	61430124,61437625,61438004,61472745	61430182,61437848,61438113,61473611	Gene ID= ENSG00000256591.5 TPM= 2.12 Transcript Type= NA
chr11	61430105	61446697	61430105	61446697	+	ENST00000542074.1@SDHAF2	ENST00000542074.1	protein_coding	61430105,61445941	61430182,61446697	Gene ID= ENSG00000167985.6 TPM= 10.62 Transcript Type= protein_coding
chr11	61515464	61517399	61515464	61517399	-	transcript2560.chr11.nnic@NA	transcript2560.chr11.nnic	NA	61515464	61517399	Gene ID= novel_gene_chr11_2561 TPM= 4.25 Transcript Type= NA
chr11	61789131	61792802	61789131	61792802	-	ENST00000543510.1@TMEM258	ENST00000543510.1	protein_coding	61791463,61790493,61789785,61789131	61792802,61790602,61789921,61789235	Gene ID= ENSG00000134825.15 TPM= 9.91 Transcript Type= protein_coding
chr11	61789130	61792580	61789130	61792580	-	ENST00000541893.5@TMEM258	ENST00000541893.5	protein_coding	61792556,61790423,61789785,61789130	61792580,61790602,61789990,61789235	Gene ID= ENSG00000134825.15 TPM= 2.47 Transcript Type= nonsense_mediated_decay
chr11	61789130	61792594	61789130	61792594	-	ENST00000545210.5@TMEM258	ENST00000545210.5	protein_coding	61792556,61790375,61789785,61789130	61792594,61790602,61789990,61789235	Gene ID= ENSG00000134825.15 TPM= 2.47 Transcript Type= nonsense_mediated_decay
chr11	61789130	61792616	61789130	61792616	-	ENST00000535297.1@TMEM258	ENST00000535297.1	protein_coding	61792556,61790375,61789130	61792616,61790602,61789235	Gene ID= ENSG00000134825.15 TPM= 1.06 Transcript Type= nonsense_mediated_decay
chr11	61789130	61792601	61789130	61792601	-	ENST00000257262.12@TMEM258	ENST00000257262.12	protein_coding	61792556,61790493,61789716,61789130	61792601,61790602,61789921,61789235	Gene ID= ENSG00000134825.15 TPM= 1.06 Transcript Type= nonsense_mediated_decay
chr11	61792637	61797244	61792637	61797244	+	ENST00000305885.2@FEN1	ENST00000305885.2	protein_coding	61792637,61795341	61793028,61797244	Gene ID= ENSG00000168496.3 TPM= 7.44 Transcript Type= protein_coding
chr11	61827761	61867354	61827761	61867354	+	ENST00000278840.8@FADS2	ENST00000278840.8	protein_coding	61827761,61837778,61840334,61840624,61848159,61857011,61857454,61862972,61863282,61863707,61865152,61865638	61828597,61837888,61840531,61840725,61848284,61857071,61857530,61863069,61863378,61863786,61865277,61867354	Gene ID= ENSG00000134824.13 TPM= 37.71 Transcript Type= protein_coding
chr11	61828280	61864221	61828280	61864221	+	ENST00000521849.5@FADS2	ENST00000521849.5	protein_coding	61828280,61837778,61840334,61840624,61848159,61857011,61857454,61862972,61863282,61863707	61828597,61837888,61840531,61840725,61848284,61857071,61857530,61863069,61863378,61864221	Gene ID= ENSG00000134824.13 TPM= 2.66 Transcript Type= protein_coding
chr11	61799625	61817162	61799625	61817162	-	ENST00000350997.11@FADS1	ENST00000350997.11	protein_coding	61816555,61813243,61812471,61810974,61810751,61806664,61804685,61803670,61803363,61803032,61802801,61799625	61817162,61813353,61812668,61811075,61810879,61806724,61804761,61803767,61803459,61803111,61802926,61802462	Gene ID= ENSG00000149485.18 TPM= 15.93 Transcript Type= protein_coding
chr11	61873526	61891569	61873526	61891569	-	transcript2598.chr11.nnic@FADS3	transcript2598.chr11.nnic	protein_coding	61891169,61880041,61879312,61878746,61878512,61878155,61877411,61876359,61876111,61875851,61873526	61891569,61880151,61879509,61878847,61878634,61878215,61877587,61876963,61876190,61875976,61873865	Gene ID= ENSG00000221968.8 TPM= 65.64 Transcript Type= NA
chr11	61873526	61891781	61873526	61891781	-	transcript2601.chr11.nic@FADS3	transcript2601.chr11.nic	protein_coding	61891169,61880041,61879312,61878746,61878512,61878155,61877511,61876359,61876111,61875851,61873526	61891781,61880151,61879509,61878847,61878634,61878215,61877587,61876963,61876190,61875976,61873865	Gene ID= ENSG00000221968.8 TPM= 62.1 Transcript Type= NA
chr11	61873526	61891628	61873526	61891628	-	transcript2608.chr11.nic@FADS3	transcript2608.chr11.nic	protein_coding	61891169,61880041,61879312,61878746,61878512,61878155,61876359,61876111,61875851,61873526	61891628,61880151,61879509,61878847,61878634,61878215,61877587,61876190,61875976,61873865	Gene ID= ENSG00000221968.8 TPM= 50.69 Transcript Type= NA
chr11	61873526	61891610	61873526	61891610	-	transcript2611.chr11.nic@FADS3	transcript2611.chr11.nic	protein_coding	61891169,61880041,61879312,61878746,61878512,61876359,61876111,61875851,61873526	61891610,61880151,61879509,61878847,61878634,61878215,61876190,61875976,61873865	Gene ID= ENSG00000221968.8 TPM= 28.38 Transcript Type= NA
chr11	61873526	61891534	61873526	61891534	-	ENST00000278829.6@FADS3	ENST00000278829.6	protein_coding	61891169,61880041,61879312,61878746,61878512,61878155,61877511,61876866,61876359,61876111,61875851,61873526	61891534,61880151,61879509,61878847,61878634,61878215,61877587,61876963,61876455,61876190,61875976,61873865	Gene ID= ENSG00000221968.8 TPM= 209.05 Transcript Type= protein_coding
chr11	61890123	61891504	61890123	61891504	-	transcript2622.chr11.nnic@NA	transcript2622.chr11.nnic	NA	61890123	61891504	Gene ID= novel_gene_chr11_2623 TPM= 3.19 Transcript Type= NA
chr11	61897301	61917525	61897301	61917525	-	ENST00000394836.6@RAB3IL1	ENST00000394836.6	protein_coding	61917357,61908054,61907565,61907393,61906466,61904754,61904546,61902442,61899314,61897301	61917525,61908306,61907660,61907470,61906684,61904882,61904658,61902541,61899380,61898360	Gene ID= ENSG00000167994.11 TPM= 4.25 Transcript Type= protein_coding
chr11	61964566	61967631	61964566	61967631	-	ENST00000620041.4@FTH1	ENST00000620041.4	protein_coding	61967548,61967312,61965369,61964987,61964566	61967631,61967453,61965515,61965112,61964891	Gene ID= ENSG00000167996.15 TPM= 148.87 Transcript Type= protein_coding
chr11	61964566	61967633	61964566	61967633	-	ENST00000534180.1@FTH1	ENST00000534180.1	protein_coding	61967312,61965369,61964987,61964566	61967633,61965577,61965112,61964891	Gene ID= ENSG00000167996.15 TPM= 43.93 Transcript Type= nonsense_mediated_decay
chr11	61964566	61967631	61964566	61967631	-	ENST00000532829.5@FTH1	ENST00000532829.5	protein_coding	61967312,61965369,61964987,61964566	61967631,61965515,61965105,61964891	Gene ID= ENSG00000167996.15 TPM= 3299.61 Transcript Type= nonsense_mediated_decay
chr11	61964585	61967607	61964585	61967607	-	ENST00000526640.5@FTH1	ENST00000526640.5	protein_coding	61967402,61965369,61964987,61964585	61967607,61965515,61965112,61964891	Gene ID= ENSG00000167996.15 TPM= 2.27 Transcript Type= protein_coding
chr11	62337448	62393412	62337448	62393412	+	ENST00000415229.6@ASRGL1	ENST00000415229.6	protein_coding	62337448,62337890,62356325,62356987,62389133,62391522,62392079	62337574,62338167,62356467,62357144,62389251,62391632,62393412	Gene ID= ENSG00000162174.12 TPM= 1.59 Transcript Type= protein_coding
chr11	62337457	62357201	62337457	62357201	+	transcript2657.chr11.nic@ASRGL1	transcript2657.chr11.nic	protein_coding	62337457,62337890,62356325,62356987	62337574,62338167,62356467,62357201	Gene ID= ENSG00000162174.12 TPM= 2.12 Transcript Type= NA
chr11	62337453	62393406	62337453	62393406	+	ENST00000301776.9@ASRGL1	ENST00000301776.9	protein_coding	62337453,62337967,62356325,62356987,62389133,62391522,62392079	62337574,62338167,62356467,62357144,62389251,62391632,62393406	Gene ID= ENSG00000162174.12 TPM= 3.72 Transcript Type= protein_coding
chr11	62337495	62357201	62337495	62357201	+	ENST00000534571.5@ASRGL1	ENST00000534571.5	protein_coding	62337495,62337967,62356325,62356987	62337574,62338167,62356467,62357201	Gene ID= ENSG00000162174.12 TPM= 1.06 Transcript Type= protein_coding
chr11	62419035	62423195	62419035	62423195	+	ENST00000278282.2@SCGB1A1	ENST00000278282.2	protein_coding	62419035,62422221,62423059	62419150,62422408,62423195	Gene ID= ENSG00000149021.6 TPM= 2.12 Transcript Type= protein_coding
chr11	62433546	62546796	62433546	62546796	-	ENST00000257247.11@AHNAK	ENST00000257247.11	protein_coding	62546660,62536469,62535945,62535003,62491732,62433546	62546796,62536567,62536098,62535190,62491831,62433891	Gene ID= ENSG00000124942.13 TPM= 48.33 Transcript Type= protein_coding
chr11	62515905	62546835	62515905	62546835	-	ENST00000378024.8@AHNAK	ENST00000378024.8	protein_coding	62546660,62536469,62535945,62535003,62515905	62546835,62536567,62536098,62535190,62534074	Gene ID= ENSG00000124942.13 TPM= 287.85 Transcript Type= protein_coding
chr11	62546137	62546422	62546137	62546422	+	transcript2669.chr11.nnic@NA	transcript2669.chr11.nnic	NA	62546137	62546422	Gene ID= novel_gene_chr11_2670 TPM= 2.12 Transcript Type= NA
chr11	62559601	62573973	62559601	62573973	-	ENST00000329251.4@EEF1G	ENST00000329251.4	protein_coding	62573831,62572584,62571838,62571540,62570965,62567399,62566806,62560282,62560069,62559601	62573973,62572742,62571901,62571682,62571108,62567528,62567010,62560454,62560193,62559837	Gene ID= ENSG00000254772.9 TPM= 1248.57 Transcript Type= protein_coding
chr11	62559603	62591531	62559603	62591531	-	ENST00000496634.2@AP002990.1	ENST00000496634.2	protein_coding	62591404,62589031,62581386,62581106,62578561,62577182,62576907,62576657,62572584,62571838,62571540,62570965,62567399,62566806,62560282,62560069,62559603	62591531,62589221,62581701,62581206,62579030,62577291,62577017,62576749,62574908,62571901,62571682,62571108,62567528,62567010,62560454,62560193,62559837	Gene ID= ENSG00000255508.7 TPM= 43.02 Transcript Type= nonsense_mediated_decay
chr11	62593214	62601840	62593214	62601840	-	ENST00000278823.6@MTA2	ENST00000278823.6	protein_coding	62601423,62600622,62600166,62598522,62598327,62598024,62597610,62597316,62596637,62596458,62596279,62596010,62595752,62595264,62594981,62594516,62594259,62593214	62601840,62600689,62600259,62598639,62598390,62598141,62597712,62597415,62596825,62596532,62596337,62596107,62595891,62595492,62595070,62594634,62594407,62594040	Gene ID= ENSG00000149480.6 TPM= 19.12 Transcript Type= protein_coding
chr11	62602218	62612765	62602218	62612765	-	ENST00000394773.6@EML3	ENST00000394773.6	protein_coding	62612436,62611425,62611087,62610879,62609629,62609354,62608962,62608736,62608542,62608201,62607666,62606958,62606063,62605855,62605642,62605113,62604113,62603944,62603729,62603149,62602759,62602218	62612765,62611596,62611344,62610992,62609696,62609477,62609132,62608805,62608652,62608296,62607821,62607099,62606214,62605980,62605773,62605180,62604201,62604041,62603816,62603247,62602889,62602678	Gene ID= ENSG00000149499.11 TPM= 10.62 Transcript Type= protein_coding
chr11	62602219	62612524	62602219	62612524	-	ENST00000278845.8@EML3	ENST00000278845.8	protein_coding	62612436,62611425,62611087,62610879,62609629,62609354,62608962,62608736,62608542,62608201,62607666,62606958,62606063,62605855,62605642,62605113,62604113,62603944,62603729,62603149,62602759,62602219	62612524,62611596,62611347,62610992,62609696,62609477,62609132,62608805,62608652,62608296,62607821,62607099,62606214,62605980,62605773,62605180,62604201,62604041,62603816,62603247,62602889,62602678	Gene ID= ENSG00000149499.11 TPM= 7.44 Transcript Type= protein_coding
chr11	62611843	62615120	62611843	62615120	+	transcript2708.chr11.nic@ROM1	transcript2708.chr11.nic	protein_coding	62611843,62614258,62614621	62612091,62614504,62615120	Gene ID= ENSG00000149489.8 TPM= 2.12 Transcript Type= NA
chr11	62612741	62615120	62612741	62615120	+	ENST00000278833.3@ROM1	ENST00000278833.3	protein_coding	62612741,62614258,62614621	62613871,62614504,62615120	Gene ID= ENSG00000149489.8 TPM= 5.31 Transcript Type= protein_coding
chr11	62615296	62622175	62615296	62622175	-	ENST00000265471.9@B3GAT3	ENST00000265471.9	protein_coding	62621866,62620497,62616987,62616506,62615296	62622175,62620671,62617347,62616796,62615799	Gene ID= ENSG00000149541.9 TPM= 25.49 Transcript Type= protein_coding
chr11	62624826	62646615	62624826	62646615	-	ENST00000346178.8@GANAB	ENST00000346178.8	protein_coding	62646562,62639627,62639359,62638983,62634821,62634310,62633445,62633184,62633005,62632565,62631030,62630601,62630379,62630197,62629814,62629588,62629194,62628769,62627289,62627048,62626860,62626571,62626335,62626065,62624826	62646615,62639731,62639467,62639110,62635000,62634375,62633514,62633271,62633101,62632745,62631183,62630836,62630505,62630276,62629957,62629684,62629295,62629012,62627353,62627124,62626934,62626684,62626447,62626165,62625924	Gene ID= ENSG00000089597.16 TPM= 111.53 Transcript Type= protein_coding
chr11	62646848	62653302	62646848	62653302	-	ENST00000330574.2@INTS5	ENST00000330574.2	protein_coding	62653170,62646848	62653302,62649999	Gene ID= ENSG00000185085.2 TPM= 12.75 Transcript Type= protein_coding
chr11	62662816	62665217	62662816	62665217	-	ENST00000524958.5@C11orf98	ENST00000524958.5	protein_coding	62665131,62664849,62663236,62662816	62665217,62664973,62663333,62663159	Gene ID= ENSG00000278615.4 TPM= 23.9 Transcript Type= protein_coding
chr11	62662817	62665181	62662817	62665181	-	ENST00000532786.2@C11orf98	ENST00000532786.2	protein_coding	62664849,62663236,62662817	62665181,62663333,62663159	Gene ID= ENSG00000278615.4 TPM= 1.59 Transcript Type= retained_intron
chr11	62662817	62671769	62662817	62671769	-	ENST00000354588.7@LBHD1	ENST00000354588.7	protein_coding	62671564,62669882,62669641,62667523,62664849,62663236,62662817	62671769,62670041,62669803,62667747,62664973,62663333,62663159	Gene ID= ENSG00000162194.12 TPM= 2.12 Transcript Type= protein_coding
chr11	62665336	62665711	62665336	62665711	+	ENST00000594728.1@METTL12	ENST00000594728.1	protein_coding	62665336	62665711	Gene ID= ENSG00000214756.7 TPM= 4.25 Transcript Type= processed_transcript
chr11	62671654	62673687	62671654	62673687	+	ENST00000377953.3@UQCC3	ENST00000377953.3	protein_coding	62671654,62671953	62671865,62673687	Gene ID= ENSG00000204922.4 TPM= 1.06 Transcript Type= protein_coding
chr11	62676498	62679090	62676498	62679090	-	ENST00000301935.9@UBXN1	ENST00000301935.9	protein_coding	62678865,62678690,62678495,62678339,62677927,62677781,62677518,62676813,62676498	62679090,62678743,62678601,62678408,62678118,62677832,62677634,62677005,62676639	Gene ID= ENSG00000162191.13 TPM= 152.24 Transcript Type= protein_coding
chr11	62676498	62679055	62676498	62679055	-	ENST00000294119.6@UBXN1	ENST00000294119.6	protein_coding	62678865,62678690,62678495,62678339,62677927,62677781,62677518,62676498	62679055,62678743,62678601,62678408,62678118,62677832,62677634,62677005	Gene ID= ENSG00000162191.13 TPM= 1.41 Transcript Type= protein_coding
chr11	62676504	62679065	62676504	62679065	-	ENST00000529640.5@UBXN1	ENST00000529640.5	protein_coding	62678865,62678690,62678495,62678339,62677939,62677781,62677518,62676813,62676504	62679065,62678743,62678601,62678408,62678118,62677832,62677634,62677005,62676639	Gene ID= ENSG00000162191.13 TPM= 2.47 Transcript Type= protein_coding
chr11	62690275	62709514	62690275	62709514	-	ENST00000405837.5@BSCL2	ENST00000405837.5	protein_coding	62709147,62707109,62705301,62702468,62694568,62692663,62692376,62691280,62691075,62690787,62690612,62690275	62709514,62707324,62705617,62702549,62694711,62692797,62692473,62691421,62691141,62690873,62690692,62690521	Gene ID= ENSG00000168000.14 TPM= 1.06 Transcript Type= protein_coding
chr11	62690276	62706315	62690276	62706315	-	ENST00000278893.11@BSCL2	ENST00000278893.11	protein_coding	62706203,62705301,62702468,62694568,62692663,62692376,62691075,62690787,62690612,62690276	62706315,62705617,62702549,62694711,62692797,62692473,62691141,62690867,62690692,62690521	Gene ID= ENSG00000168000.14 TPM= 1.06 Transcript Type= protein_coding
chr11	62690295	62706344	62690295	62706344	-	ENST00000407022.7@BSCL2	ENST00000407022.7	protein_coding	62706203,62705301,62702468,62694568,62692663,62692376,62691280,62691075,62690787,62690612,62690295	62706344,62705617,62702549,62694711,62692797,62692473,62691421,62691141,62690867,62690692,62690521	Gene ID= ENSG00000168000.14 TPM= 13.81 Transcript Type= protein_coding
chr11	62690315	62706344	62690315	62706344	-	ENST00000421906.5@BSCL2	ENST00000421906.5	protein_coding	62706259,62705301,62702468,62694568,62692663,62692376,62691280,62691075,62690787,62690612,62690315	62706344,62705617,62702549,62694711,62692797,62692473,62691421,62691141,62690867,62690692,62690521	Gene ID= ENSG00000168000.14 TPM= 3.19 Transcript Type= protein_coding
chr11	62690276	62691178	62690276	62691178	-	ENST00000470529.5@BSCL2	ENST00000470529.5	protein_coding	62691075,62690787,62690612,62690276	62691178,62690867,62690692,62690521	Gene ID= ENSG00000168000.14 TPM= 1.06 Transcript Type= retained_intron
chr11	62714748	62727482	62714748	62727482	-	transcript2738.chr11.nnic@HNRNPUL2-BSCL2	transcript2738.chr11.nnic	protein_coding	62726619,62724291,62723914,62723587,62722813,62722601,62722117,62721820,62721295,62720069,62714748	62727482,62724426,62723990,62723726,62722903,62722713,62722380,62721942,62721423,62720191,62714820	Gene ID= ENSG00000234857.2 TPM= 2.12 Transcript Type= NA
chr11	62712755	62714138	62712755	62714138	-	transcript2761.chr11.nnic@NA	transcript2761.chr11.nnic	NA	62712755	62714138	Gene ID= novel_gene_chr11_2762 TPM= 2.12 Transcript Type= NA
chr11	62728539	62738636	62728539	62738636	+	ENST00000316461.8@TTC9C	ENST00000316461.8	protein_coding	62728539,62735382,62738288	62729086,62735564,62738636	Gene ID= ENSG00000162222.13 TPM= 3.72 Transcript Type= protein_coding
chr11	62728642	62738603	62728642	62738603	+	ENST00000532583.1@TTC9C	ENST00000532583.1	protein_coding	62728642,62728823,62735382,62738288	62728736,62729086,62735564,62738603	Gene ID= ENSG00000162222.13 TPM= 1.59 Transcript Type= protein_coding
chr11	62750963	62754188	62750963	62754188	-	ENST00000394807.3@ZBTB3	ENST00000394807.3	protein_coding	62753964,62750963	62754188,62753715	Gene ID= ENSG00000185670.7 TPM= 6.37 Transcript Type= protein_coding
chr11	62761544	62766710	62761544	62766710	+	ENST00000301788.11@POLR2G	ENST00000301788.11	protein_coding	62761544,62761795,62762867,62765182,62765340,62765653,62766243,62766494	62761660,62761904,62763026,62765232,62765405,62765724,62766276,62766710	Gene ID= ENSG00000168002.11 TPM= 29.74 Transcript Type= protein_coding
chr11	62761617	62766710	62761617	62766710	+	ENST00000531944.5@POLR2G	ENST00000531944.5	protein_coding	62761617,62761795,62765182,62765340,62765653,62766243,62766494	62761660,62762866,62765232,62765405,62765724,62766276,62766710	Gene ID= ENSG00000168002.11 TPM= 2.12 Transcript Type= nonsense_mediated_decay
chr11	62771120	62771606	62771120	62771606	-	ENST00000596071.1@AP001160.2	ENST00000596071.1	antisense_RNA	62771120	62771606	Gene ID= ENSG00000267811.1 TPM= 1.06 Transcript Type= antisense_RNA
chr11	62771120	62792009	62771120	62792009	-	transcript2789.chr11.nnic@TMEM223	transcript2789.chr11.nnic	protein_coding	62791679,62774595,62772066,62771120	62792009,62774665,62772132,62771362	Gene ID= ENSG00000168569.7 TPM= 2.12 Transcript Type= NA
chr11	62771303	62787342	62771303	62787342	+	ENST00000294168.7@TAF6L	ENST00000294168.7	protein_coding	62771303,62775771,62776384,62777978,62778285,62778869,62781894,62782113,62782693,62786260,62786517	62771490,62775930,62776470,62778128,62778335,62778963,62781968,62782333,62782825,62786388,62787342	Gene ID= ENSG00000162227.7 TPM= 17.53 Transcript Type= protein_coding
chr11	62771395	62787342	62771395	62787342	+	transcript2776.chr11.nic@TAF6L	transcript2776.chr11.nic	protein_coding	62771395,62775771,62776384,62777978,62778285,62781894,62782113,62782693,62786260,62786517	62771490,62775930,62776470,62778128,62778963,62781968,62782333,62782825,62786388,62787342	Gene ID= ENSG00000162227.7 TPM= 5.84 Transcript Type= NA
chr11	62771398	62787342	62771398	62787342	+	transcript2777.chr11.nic@TAF6L	transcript2777.chr11.nic	protein_coding	62771398,62775771,62776384,62777978,62778285,62781894,62782113,62786260,62786517	62771490,62775930,62776470,62778128,62778963,62781968,62782825,62786388,62787342	Gene ID= ENSG00000162227.7 TPM= 8.5 Transcript Type= NA
chr11	62786022	62789686	62786022	62789686	-	transcript2797.chr11.nnic@NA	transcript2797.chr11.nnic	NA	62786022	62789686	Gene ID= novel_gene_chr11_2798 TPM= 10.62 Transcript Type= NA
chr11	62787427	62790405	62787427	62790405	+	ENST00000333449.8@TMEM179B	ENST00000333449.8	protein_coding	62787427,62789023,62789292,62789601,62789886	62787527,62789210,62789426,62789679,62790405	Gene ID= ENSG00000185475.10 TPM= 7.44 Transcript Type= protein_coding
chr11	62792126	62805492	62792126	62805492	-	ENST00000294172.6@NXF1	ENST00000294172.6	protein_coding	62805329,62803792,62803419,62802177,62801942,62801739,62801562,62801329,62801094,62800377,62798539,62797318,62797183,62796460,62796287,62796066,62795901,62794935,62794258,62792641,62792126	62805492,62803978,62803572,62802260,62802046,62801819,62801631,62801417,62801201,62800486,62798575,62797386,62797238,62796567,62796345,62796181,62795943,62795007,62794440,62792701,62792514	Gene ID= ENSG00000162231.13 TPM= 11.15 Transcript Type= protein_coding
chr11	62792123	62805470	62792123	62805470	-	ENST00000531709.6@NXF1	ENST00000531709.6	protein_coding	62805329,62803792,62803419,62802177,62801942,62801739,62801562,62801329,62801094,62798539,62797318,62797183,62796460,62796287,62796066,62795901,62794935,62794258,62792641,62792123	62805470,62803978,62803572,62802260,62802046,62801819,62801631,62801417,62801201,62800486,62797386,62797238,62796567,62796345,62796181,62795943,62795007,62794440,62792701,62792514	Gene ID= ENSG00000162231.13 TPM= 17.53 Transcript Type= protein_coding
chr11	62806897	62832088	62806897	62832088	-	ENST00000294179.7@STX5	ENST00000294179.7	protein_coding	62831954,62831019,62827561,62827343,62827155,62825423,62825283,62825036,62824459,62824166,62806897	62832088,62831262,62827631,62827398,62827225,62825539,62825339,62825117,62824565,62824287,62807628	Gene ID= ENSG00000162236.11 TPM= 19.12 Transcript Type= protein_coding
chr11	62806925	62832042	62806925	62832042	-	ENST00000394690.5@STX5	ENST00000394690.5	protein_coding	62831954,62831019,62827561,62827343,62827155,62825423,62825283,62825036,62824459,62824166,62806925	62832042,62831110,62827631,62827398,62827225,62825539,62825339,62825117,62824565,62824287,62807628	Gene ID= ENSG00000162236.11 TPM= 2.12 Transcript Type= protein_coding
chr11	62806937	62832042	62806937	62832042	-	ENST00000491231.5@STX5	ENST00000491231.5	protein_coding	62831954,62831019,62827561,62827343,62827155,62825423,62825283,62825025,62824459,62824166,62806937	62832042,62831262,62827631,62827398,62827225,62825539,62825339,62825117,62824565,62824287,62807628	Gene ID= ENSG00000162236.11 TPM= 1.06 Transcript Type= nonsense_mediated_decay
chr11	62809319	62809703	62809319	62809703	+	transcript2806.chr11.nnic@NA	transcript2806.chr11.nnic	NA	62809319	62809703	Gene ID= novel_gene_chr11_2807 TPM= 2.12 Transcript Type= NA
chr11	62834387	62839596	62834387	62839596	-	ENST00000541930.5@WDR74	ENST00000541930.5	protein_coding	62839507,62839322,62839114,62835919,62835695,62835431,62834387	62839596,62839428,62839235,62836036,62835841,62835532,62834527	Gene ID= ENSG00000133316.15 TPM= 1.06 Transcript Type= retained_intron
chr11	62851988	62855886	62851988	62855886	-	transcript2810.chr11.nic@SNHG1	transcript2810.chr11.nic	processed_transcript	62855865,62855424,62855133,62854888,62854519,62854018,62853801,62853552,62853075,62852811,62851988	62855886,62855466,62855216,62854938,62854551,62854064,62853833,62853590,62853115,62852839,62852681	Gene ID= ENSG00000255717.6 TPM= 3.19 Transcript Type= NA
chr11	62880872	62888855	62880872	62888855	+	ENST00000338663.11@SLC3A2	ENST00000338663.11	protein_coding	62880872,62881893,62882908,62884457,62884632,62885177,62885465,62888135,62888331	62881447,62882066,62882999,62884525,62884690,62885357,62885608,62888218,62888855	Gene ID= ENSG00000168003.16 TPM= 58.42 Transcript Type= protein_coding
chr11	62881725	62888845	62881725	62888845	+	ENST00000536981.5@SLC3A2	ENST00000536981.5	protein_coding	62881725,62882908,62884457,62884632,62885177,62885465,62888135,62888331	62882066,62882999,62884525,62884690,62885357,62885608,62888218,62888845	Gene ID= ENSG00000168003.16 TPM= 5.31 Transcript Type= protein_coding
chr11	63536821	63546462	63536821	63546462	+	ENST00000255688.7@RARRES3	ENST00000255688.7	protein_coding	63536821,63539516,63544621,63546149	63536877,63539624,63544889,63546462	Gene ID= ENSG00000133321.10 TPM= 3.19 Transcript Type= protein_coding
chr11	63569735	63571625	63569735	63571625	-	transcript2837.chr11.nnic@NA	transcript2837.chr11.nnic	NA	63569735	63571625	Gene ID= novel_gene_chr11_2838 TPM= 11.68 Transcript Type= NA
chr11	63571782	63573642	63571782	63573642	+	transcript2833.chr11.nnic@NA	transcript2833.chr11.nnic	NA	63571782	63573642	Gene ID= novel_gene_chr11_2834 TPM= 15.93 Transcript Type= NA
chr11	63624087	63671612	63624087	63671612	-	ENST00000398868.7@ATL3	ENST00000398868.7	protein_coding	63671290,63659038,63658761,63652471,63651936,63646507,63644169,63643357,63636207,63635534,63633026,63631040,63624087	63671612,63659252,63658904,63652575,63651986,63646563,63644261,63643495,63636334,63635590,63633097,63631471,63629405	Gene ID= ENSG00000184743.12 TPM= 31.86 Transcript Type= protein_coding
chr11	63681450	63759891	63681450	63759891	+	ENST00000356000.7@RTN3	ENST00000356000.7	protein_coding	63681450,63704851,63749991,63752507,63753069,63753662,63756112,63758156	63681778,63704907,63750198,63752645,63753138,63753708,63756170,63759891	Gene ID= ENSG00000133318.13 TPM= 29.74 Transcript Type= protein_coding
chr11	63681500	63759885	63681500	63759885	+	ENST00000537981.5@RTN3	ENST00000537981.5	protein_coding	63681500,63749991,63752507,63753069,63753662,63756112,63758156	63681778,63750198,63752645,63753138,63753708,63756170,63759885	Gene ID= ENSG00000133318.13 TPM= 63.73 Transcript Type= protein_coding
chr11	63759893	63768787	63759893	63768787	-	transcript2853.chr11.nic@C11orf95	transcript2853.chr11.nic	protein_coding	63768484,63765807,63759893	63768787,63766304,63763869	Gene ID= ENSG00000188070.9 TPM= 21.24 Transcript Type= NA
chr11	63813388	63827718	63813388	63827718	+	ENST00000294244.8@C11orf84	ENST00000294244.8	protein_coding	63813388,63817805,63818216,63818527,63818802,63826928	63813813,63818134,63818365,63818652,63819002,63827718	Gene ID= ENSG00000168005.8 TPM= 1.06 Transcript Type= protein_coding
chr11	63838928	63911019	63838928	63911019	+	ENST00000402010.6@MARK2	ENST00000402010.6	protein_coding	63838928,63895159,63895580,63898232,63898608,63898763,63899052,63899874,63900559,63900780,63900957,63902198,63902601,63903061,63903986,63904786,63906088,63908260,63908877	63839560,63895338,63895633,63898280,63898673,63898833,63899108,63900110,63900678,63900879,63901069,63902330,63902782,63903158,63904147,63905043,63906114,63908304,63911019	Gene ID= ENSG00000072518.20 TPM= 36.11 Transcript Type= protein_coding
chr11	63839005	63909579	63839005	63909579	+	ENST00000361128.9@MARK2	ENST00000361128.9	protein_coding	63839005,63895159,63895580,63898232,63898608,63898763,63899052,63899874,63900559,63900780,63900957,63902198,63902601,63903061,63904786,63906088,63908877	63839560,63895338,63895633,63898280,63898673,63898833,63899108,63900110,63900678,63900879,63901069,63902330,63902782,63903158,63905043,63906114,63909579	Gene ID= ENSG00000072518.20 TPM= 9.56 Transcript Type= protein_coding
chr11	63839093	63909596	63839093	63909596	+	ENST00000350490.11@MARK2	ENST00000350490.11	protein_coding	63839093,63895159,63895580,63898232,63898608,63898763,63899052,63899874,63900559,63900780,63900957,63902198,63902604,63903061,63904786,63908877	63839560,63895338,63895633,63898280,63898673,63898833,63899108,63900110,63900678,63900879,63901069,63902330,63902782,63903158,63905043,63909596	Gene ID= ENSG00000072518.20 TPM= 7.44 Transcript Type= protein_coding
chr11	63938996	63957328	63938996	63957328	+	ENST00000377793.8@NAA40	ENST00000377793.8	protein_coding	63938996,63945840,63946951,63952238,63952407,63952756,63953972,63954338	63939102,63945935,63947003,63952333,63952565,63952839,63954049,63957328	Gene ID= ENSG00000110583.12 TPM= 11.68 Transcript Type= protein_coding
chr11	63974607	63976543	63974607	63976543	+	ENST00000314133.3@COX8A	ENST00000314133.3	protein_coding	63974607,63976225	63974794,63976543	Gene ID= ENSG00000176340.3 TPM= 728.64 Transcript Type= protein_coding
chr11	63986413	63998415	63986413	63998415	+	ENST00000538426.5@OTUB1	ENST00000538426.5	protein_coding	63986413,63988337,63988654,63996530,63996857,63997050,63997349	63986514,63988398,63988752,63996648,63996941,63997244,63998415	Gene ID= ENSG00000167770.11 TPM= 54.7 Transcript Type= protein_coding
chr11	63985853	63998411	63985853	63998411	+	ENST00000301453.7@OTUB1	ENST00000301453.7	protein_coding	63985853,63988337,63988654,63996530,63997050,63997349	63986514,63988398,63988752,63996941,63997244,63998411	Gene ID= ENSG00000167770.11 TPM= 26.02 Transcript Type= retained_intron
chr11	63998558	64166113	63998558	64166113	-	transcript2889.chr11.nic@MACROD1	transcript2889.chr11.nic	protein_coding	64165697,64152292,64151239,64015252,64000227,63999642,63999530,63999331,63998955,63998838,63998558	64166113,64152393,64151355,64015281,64000343,63999763,63999560,63999404,63999000,63998872,63998687	Gene ID= ENSG00000133315.10 TPM= 4.78 Transcript Type= NA
chr11	63998566	64166144	63998566	64166144	-	transcript2896.chr11.nic@MACROD1	transcript2896.chr11.nic	protein_coding	64165697,64152292,64151239,64015252,64000227,63999642,63999530,63999331,63998955,63998566	64166144,64152393,64151355,64015281,64000343,63999763,63999560,63999404,63999036,63998687	Gene ID= ENSG00000133315.10 TPM= 12.75 Transcript Type= NA
chr11	63998554	64166002	63998554	64166002	-	transcript2899.chr11.nic@MACROD1	transcript2899.chr11.nic	protein_coding	64165697,64152292,64151239,64015252,64000227,63999642,63999530,63998554	64166002,64152393,64151355,64015281,64000343,63999763,63999560,63999404	Gene ID= ENSG00000133315.10 TPM= 5.31 Transcript Type= NA
chr11	63998558	64166061	63998558	64166061	-	ENST00000255681.6@MACROD1	ENST00000255681.6	protein_coding	64165697,64152292,64151239,64015252,64000227,63999642,63999530,63999331,63998955,63998838,63998558	64166061,64152393,64151355,64015281,64000343,63999763,63999560,63999404,63999036,63998872,63998687	Gene ID= ENSG00000133315.10 TPM= 100.37 Transcript Type= protein_coding
chr11	64125243	64127288	64125243	64127288	+	transcript2907.chr11.nnic@NA	transcript2907.chr11.nnic	NA	64125243	64127288	Gene ID= novel_gene_chr11_2908 TPM= 3.19 Transcript Type= NA
chr11	64186115	64204543	64186115	64204543	+	ENST00000305218.8@STIP1	ENST00000305218.8	protein_coding	64186115,64193078,64194189,64194479,64195645,64197271,64197493,64197854,64199940,64200169,64202876,64203125,64203450,64204054	64186270,64193287,64194330,64194620,64195813,64197397,64197595,64197974,64200036,64200293,64202912,64203228,64203622,64204543	Gene ID= ENSG00000168439.16 TPM= 232.08 Transcript Type= protein_coding
chr11	64223833	64226217	64223833	64226217	-	transcript2935.chr11.nic@TRPT1	transcript2935.chr11.nic	protein_coding	64226050,64225786,64225499,64224801,64224543,64224285,64224100,64223833	64226217,64225869,64225580,64224970,64224717,64224341,64224162,64223967	Gene ID= ENSG00000149743.13 TPM= 3.3 Transcript Type= NA
chr11	64223800	64226254	64223800	64226254	-	ENST00000394546.6@TRPT1	ENST00000394546.6	protein_coding	64226050,64225786,64225499,64224795,64224543,64224285,64224100,64223800	64226254,64225869,64225580,64224970,64224717,64224341,64224210,64223967	Gene ID= ENSG00000149743.13 TPM= 56.83 Transcript Type= protein_coding
chr11	64223833	64226836	64223833	64226836	-	transcript2940.chr11.nic@TRPT1	transcript2940.chr11.nic	protein_coding	64226191,64225786,64225499,64224801,64224543,64224285,64224100,64223833	64226836,64225869,64225580,64224970,64224717,64224341,64224210,64223967	Gene ID= ENSG00000149743.13 TPM= 4.03 Transcript Type= NA
chr11	64223799	64226150	64223799	64226150	-	ENST00000394547.7@TRPT1	ENST00000394547.7	protein_coding	64226050,64225499,64224801,64224543,64224285,64224100,64223799	64226150,64225580,64224970,64224717,64224341,64224210,64223967	Gene ID= ENSG00000149743.13 TPM= 10.27 Transcript Type= protein_coding
chr11	64223833	64226200	64223833	64226200	-	transcript2956.chr11.nnic@TRPT1	transcript2956.chr11.nnic	protein_coding	64226098,64225499,64224801,64224543,64224285,64224100,64223833	64226200,64225580,64224970,64224717,64224341,64224210,64223967	Gene ID= ENSG00000149743.13 TPM= 4.03 Transcript Type= NA
chr11	64223833	64226217	64223833	64226217	-	transcript2958.chr11.nic@TRPT1	transcript2958.chr11.nic	protein_coding	64226050,64225786,64224801,64224543,64224285,64224100,64223833	64226217,64225869,64225580,64224717,64224341,64224210,64223967	Gene ID= ENSG00000149743.13 TPM= 4.03 Transcript Type= NA
chr11	64223833	64226199	64223833	64226199	-	transcript2974.chr11.nnic@TRPT1	transcript2974.chr11.nnic	protein_coding	64226050,64225499,64224543,64224285,64224100,64223833	64226199,64225580,64224717,64224341,64224210,64223967	Gene ID= ENSG00000149743.13 TPM= 6.64 Transcript Type= NA
chr11	64223830	64226229	64223830	64226229	-	ENST00000539436.5@TRPT1	ENST00000539436.5	protein_coding	64226050,64225786,64224801,64224285,64224100,64223830	64226229,64225869,64225580,64224717,64224210,64223967	Gene ID= ENSG00000149743.13 TPM= 1.06 Transcript Type= retained_intron
chr11	64223845	64226209	64223845	64226209	-	ENST00000317459.10@TRPT1	ENST00000317459.10	protein_coding	64226050,64225786,64225499,64224801,64224543,64224285,64224100,64223845	64226209,64225869,64225580,64224970,64224717,64224341,64224210,64223967	Gene ID= ENSG00000149743.13 TPM= 60.84 Transcript Type= protein_coding
chr11	64223858	64226199	64223858	64226199	-	transcript3008.chr11.nnic@NA	transcript3008.chr11.nnic	NA	64223858	64226199	Gene ID= novel_gene_chr11_3009 TPM= 8.5 Transcript Type= NA
chr11	64226249	64230016	64226249	64230016	+	transcript2963.chr11.nic@NUDT22	transcript2963.chr11.nic	protein_coding	64226249,64226635,64227568,64229247,64229478,64229850	64226297,64227132,64227666,64229344,64229571,64230016	Gene ID= ENSG00000149761.8 TPM= 18.59 Transcript Type= NA
chr11	64226249	64230016	64226249	64230016	+	transcript2982.chr11.nic@NUDT22	transcript2982.chr11.nic	protein_coding	64226249,64226635,64229247,64229478,64229850	64226297,64227132,64229344,64229571,64230016	Gene ID= ENSG00000149761.8 TPM= 3.72 Transcript Type= NA
chr11	64226264	64230016	64226264	64230016	+	transcript2984.chr11.nic@NUDT22	transcript2984.chr11.nic	protein_coding	64226264,64227568,64229247,64229478,64229850	64227132,64227666,64229344,64229571,64230016	Gene ID= ENSG00000149761.8 TPM= 21.77 Transcript Type= NA
chr11	64226276	64230016	64226276	64230016	+	transcript2994.chr11.nic@NUDT22	transcript2994.chr11.nic	protein_coding	64226276,64229247,64229478,64229850	64227132,64229344,64229571,64230016	Gene ID= ENSG00000149761.8 TPM= 7.97 Transcript Type= NA
chr11	64226290	64230016	64226290	64230016	+	ENST00000279206.7@NUDT22	ENST00000279206.7	protein_coding	64226290,64226635,64227568,64229247,64229478,64229850	64226427,64227132,64227666,64229344,64229571,64230016	Gene ID= ENSG00000149761.8 TPM= 71.7 Transcript Type= protein_coding
chr11	64226290	64230007	64226290	64230007	+	ENST00000441250.6@NUDT22	ENST00000441250.6	protein_coding	64226290,64226635,64229247,64229478,64229850	64226427,64227132,64229344,64229571,64230007	Gene ID= ENSG00000149761.8 TPM= 7.97 Transcript Type= protein_coding
chr11	64226368	64234281	64226368	64234281	+	transcript2930.chr11.nic@DNAJC4	transcript2930.chr11.nic	protein_coding	64226368,64227568,64229247,64229478,64230183,64230432,64231871,64232430,64232704,64233894,64234073	64227132,64227666,64229344,64229571,64230319,64230940,64231964,64232614,64232865,64233980,64234281	Gene ID= ENSG00000110011.13 TPM= 43.55 Transcript Type= NA
chr11	64230561	64234281	64230561	64234281	+	transcript3001.chr11.nnic@DNAJC4	transcript3001.chr11.nnic	protein_coding	64230561,64233894,64234073	64230940,64233980,64234281	Gene ID= ENSG00000110011.13 TPM= 5.31 Transcript Type= NA
chr11	64230758	64234281	64230758	64234281	+	ENST00000321460.5@DNAJC4	ENST00000321460.5	protein_coding	64230758,64231871,64232430,64232701,64233894	64230940,64231964,64232614,64232865,64234281	Gene ID= ENSG00000110011.13 TPM= 8.5 Transcript Type= protein_coding
chr11	64232784	64234278	64232784	64234278	+	transcript3006.chr11.nnic@NA	transcript3006.chr11.nnic	NA	64232784	64234278	Gene ID= novel_gene_chr11_3007 TPM= 3.19 Transcript Type= NA
chr11	64234538	64238793	64234538	64238793	+	ENST00000309422.6@VEGFB	ENST00000309422.6	protein_coding	64234538,64235458,64235813,64236254,64237187,64237420,64238356	64234893,64235500,64236009,64236327,64237222,64237655,64238793	Gene ID= ENSG00000173511.9 TPM= 209.6 Transcript Type= protein_coding
chr11	64234820	64238775	64234820	64238775	+	ENST00000426086.2@VEGFB	ENST00000426086.2	protein_coding	64234820,64235458,64235813,64236254,64237187,64237521,64238356	64234893,64235500,64236009,64236327,64237222,64237655,64238775	Gene ID= ENSG00000173511.9 TPM= 55.23 Transcript Type= protein_coding
chr11	64241089	64244126	64241089	64244126	+	transcript3011.chr11.nnic@FKBP2	transcript3011.chr11.nnic	protein_coding	64241089,64242419,64243199,64243451,64243841,64243968	64241132,64242558,64243311,64243497,64243876,64244126	Gene ID= ENSG00000173486.12 TPM= 7.73 Transcript Type= NA
chr11	64241004	64244124	64241004	64244124	+	ENST00000309366.8@FKBP2	ENST00000309366.8	protein_coding	64241004,64242384,64243199,64243451,64243841,64243968	64241132,64242558,64243311,64243497,64243876,64244124	Gene ID= ENSG00000173486.12 TPM= 72.7 Transcript Type= protein_coding
chr11	64241617	64244126	64241617	64244126	+	transcript3017.chr11.nnic@FKBP2	transcript3017.chr11.nnic	protein_coding	64241617,64242384,64243199,64243451,64243841,64243968	64241661,64242558,64243311,64243497,64243876,64244126	Gene ID= ENSG00000173486.12 TPM= 10.39 Transcript Type= NA
chr11	64241156	64244126	64241156	64244126	+	ENST00000449942.6@FKBP2	ENST00000449942.6	protein_coding	64241156,64242384,64243199,64243451,64243841,64243968	64241238,64242558,64243311,64243497,64243876,64244126	Gene ID= ENSG00000173486.12 TPM= 11.45 Transcript Type= protein_coding
chr11	64244484	64246941	64244484	64246941	-	ENST00000309318.7@PPP1R14B	ENST00000309318.7	protein_coding	64246416,64245204,64244930,64244484	64246941,64245287,64244962,64244822	Gene ID= ENSG00000173457.10 TPM= 106.22 Transcript Type= protein_coding
chr11	64251523	64267921	64251523	64267921	+	ENST00000279230.10@PLCB3	ENST00000279230.10	protein_coding	64251523,64254415,64254748,64254898,64255234,64255396,64255541,64255721,64256376,64256618,64258473,64258885,64259058,64260029,64261400,64261581,64261952,64262407,64262647,64263498,64263691,64264021,64264951,64265192,64265310,64265886,64266126,64266315,64266495,64267185,64267353	64251748,64254492,64254816,64255038,64255313,64255449,64255616,64255821,64256542,64256764,64258713,64258969,64259244,64260234,64261496,64261665,64262076,64262561,64262808,64263597,64263795,64264112,64265104,64265227,64265502,64266039,64266202,64266404,64266552,64267271,64267921	Gene ID= ENSG00000149782.11 TPM= 7.44 Transcript Type= protein_coding
chr11	64269830	64284639	64269830	64284639	-	ENST00000394532.7@BAD	ENST00000394532.7	protein_coding	64284182,64271613,64269830	64284639,64271803,64270337	Gene ID= ENSG00000002330.13 TPM= 14.87 Transcript Type= protein_coding
chr11	64269834	64284669	64269834	64284669	-	ENST00000309032.7@BAD	ENST00000309032.7	protein_coding	64284631,64284182,64271613,64269834	64284669,64284376,64271803,64270337	Gene ID= ENSG00000002330.13 TPM= 84.97 Transcript Type= protein_coding
chr11	64284802	64289494	64284802	64289494	+	transcript3035.chr11.nic@GPR137	transcript3035.chr11.nic	protein_coding	64284802,64286510,64286965,64287721,64288065,64288340,64288603,64289037	64285380,64286881,64287014,64287946,64288214,64288468,64288721,64289494	Gene ID= ENSG00000173264.14 TPM= 2.92 Transcript Type= NA
chr11	64285840	64289494	64285840	64289494	+	transcript3039.chr11.nnic@GPR137	transcript3039.chr11.nnic	protein_coding	64285840,64286510,64286965,64287721,64288065,64288340,64288603,64289037	64286234,64286881,64287014,64287946,64288214,64288468,64288721,64289494	Gene ID= ENSG00000173264.14 TPM= 10.36 Transcript Type= NA
chr11	64285833	64289500	64285833	64289500	+	transcript3046.chr11.nic@GPR137	transcript3046.chr11.nic	protein_coding	64285833,64286965,64287721,64288065,64288340,64289037	64286881,64287014,64287946,64288214,64288468,64289500	Gene ID= ENSG00000173264.14 TPM= 2.92 Transcript Type= NA
chr11	64285849	64289494	64285849	64289494	+	transcript3047.chr11.nic@GPR137	transcript3047.chr11.nic	protein_coding	64285849,64286965,64287721,64288065,64288603,64289037	64286881,64287014,64287946,64288468,64288721,64289494	Gene ID= ENSG00000173264.14 TPM= 6.11 Transcript Type= NA
chr11	64286418	64289494	64286418	64289494	+	ENST00000438980.6@GPR137	ENST00000438980.6	protein_coding	64286418,64286965,64287721,64288065,64288340,64288603,64289037	64286881,64287014,64287946,64288214,64288468,64288721,64289494	Gene ID= ENSG00000173264.14 TPM= 14.6 Transcript Type= protein_coding
chr11	64286420	64289491	64286420	64289491	+	ENST00000313074.7@GPR137	ENST00000313074.7	protein_coding	64286420,64286965,64287721,64288065,64288340,64288603,64289143	64286881,64287014,64287946,64288214,64288468,64288721,64289491	Gene ID= ENSG00000173264.14 TPM= 3.45 Transcript Type= protein_coding
chr11	64305521	64316743	64305521	64316743	+	transcript3058.chr11.nnic@ESRRA	transcript3058.chr11.nnic	protein_coding	64305521,64306286,64307168,64313951,64314239,64314741,64315001,64315707	64305736,64306448,64307504,64314067,64314367,64314911,64315270,64316743	Gene ID= ENSG00000173153.13 TPM= 14.08 Transcript Type= NA
chr11	64306227	64316743	64306227	64316743	+	ENST00000405666.5@ESRRA	ENST00000405666.5	protein_coding	64306227,64307168,64313951,64314239,64314741,64315001,64315707	64306448,64307504,64314067,64314367,64314911,64315270,64316743	Gene ID= ENSG00000173153.13 TPM= 41.7 Transcript Type= protein_coding
chr11	64305578	64316738	64305578	64316738	+	ENST00000000442.10@ESRRA	ENST00000000442.10	protein_coding	64305578,64307168,64313951,64314239,64314741,64315001,64315707	64305736,64307504,64314067,64314367,64314911,64315270,64316738	Gene ID= ENSG00000173153.13 TPM= 117.11 Transcript Type= protein_coding
chr11	64311984	64315345	64311984	64315345	-	transcript3078.chr11.nnic@NA	transcript3078.chr11.nnic	NA	64311984	64315345	Gene ID= novel_gene_chr11_3079 TPM= 16.99 Transcript Type= NA
chr11	64316691	64318084	64316691	64318084	-	ENST00000544844.5@TRMT112	ENST00000544844.5	protein_coding	64317449,64317264,64317058,64316691	64318084,64317365,64317147,64316968	Gene ID= ENSG00000173113.6 TPM= 116.84 Transcript Type= protein_coding
chr11	64316696	64317553	64316696	64317553	-	ENST00000539854.1@TRMT112	ENST00000539854.1	protein_coding	64317449,64317264,64316696	64317553,64317365,64317147	Gene ID= ENSG00000173113.6 TPM= 4.25 Transcript Type= protein_coding
chr11	64318088	64321811	64318088	64321811	+	ENST00000265462.8@PRDX5	ENST00000265462.8	protein_coding	64318088,64319734,64320661,64320865,64321007,64321586	64318386,64319868,64320792,64320903,64321068,64321811	Gene ID= ENSG00000126432.13 TPM= 345.2 Transcript Type= protein_coding
chr11	64318119	64321811	64318119	64321811	+	transcript3086.chr11.nnic@PRDX5	transcript3086.chr11.nnic	protein_coding	64318119,64320661,64320865,64321007,64321586	64318386,64320792,64320903,64321068,64321811	Gene ID= ENSG00000126432.13 TPM= 15.93 Transcript Type= NA
chr11	64318182	64321742	64318182	64321742	+	ENST00000347941.4@PRDX5	ENST00000347941.4	protein_coding	64318182,64320865,64321007,64321586	64318386,64320903,64321068,64321742	Gene ID= ENSG00000126432.13 TPM= 1.06 Transcript Type= protein_coding
chr11	64359148	64372215	64359148	64372215	+	ENST00000528057.5@RPS6KA4	ENST00000528057.5	protein_coding	64359148,64359378,64360163,64360477,64361134,64361469,64361642,64361852,64365301,64368132,64368489,64368704,64369446,64369699,64370225,64370563,64371283	64359290,64359449,64360381,64360592,64361241,64361549,64361745,64362002,64365465,64368260,64368601,64368797,64369619,64369893,64370384,64370726,64372215	Gene ID= ENSG00000162302.12 TPM= 7.44 Transcript Type= protein_coding
chr11	64359171	64372215	64359171	64372215	+	ENST00000334205.8@RPS6KA4	ENST00000334205.8	protein_coding	64359171,64359378,64360163,64360477,64361134,64361469,64361642,64361852,64365301,64368132,64368468,64368704,64369446,64369699,64370225,64370563,64371283	64359290,64359449,64360381,64360592,64361241,64361549,64361745,64362002,64365465,64368260,64368601,64368797,64369619,64369893,64370384,64370726,64372215	Gene ID= ENSG00000162302.12 TPM= 13.81 Transcript Type= protein_coding
chr11	64740866	64744145	64740866	64744145	-	ENST00000377486.7@RASGRP2	ENST00000377486.7	protein_coding	64744003,64742794,64742010,64741439,64740866	64744145,64742937,64742112,64741501,64741079	Gene ID= ENSG00000068831.18 TPM= 1.41 Transcript Type= protein_coding
chr11	64740866	64744863	64740866	64744863	-	transcript3107.chr11.nnic@RASGRP2	transcript3107.chr11.nnic	protein_coding	64744789,64742794,64742010,64741439,64740866	64744863,64742937,64742112,64741501,64741079	Gene ID= ENSG00000068831.18 TPM= 3.54 Transcript Type= NA
chr11	64726911	64744834	64726911	64744834	-	ENST00000377497.7@RASGRP2	ENST00000377497.7	protein_coding	64744742,64742794,64742010,64741439,64740948,64740013,64739636,64739360,64736753,64735903,64735542,64735112,64730053,64729762,64728863,64727296,64726911	64744834,64742937,64742112,64741501,64741079,64740163,64739809,64739476,64737034,64735980,64735664,64735227,64730194,64729798,64729042,64727360,64727131	Gene ID= ENSG00000068831.18 TPM= 6.37 Transcript Type= protein_coding
chr11	64740866	64744859	64740866	64744859	-	ENST00000377487.5@RASGRP2	ENST00000377487.5	protein_coding	64744742,64742794,64742010,64741439,64740866	64744859,64742937,64742112,64741501,64741079	Gene ID= ENSG00000068831.18 TPM= 20.53 Transcript Type= protein_coding
chr11	64746389	64760297	64746389	64760297	-	ENST00000164139.3@PYGM	ENST00000164139.3	protein_coding	64759656,64758603,64758437,64758246,64757779,64755447,64755273,64754693,64754253,64753879,64753519,64753073,64752403,64751924,64751597,64751325,64750376,64747224,64746921,64746389	64760297,64758704,64758515,64758349,64757910,64755558,64755355,64754836,64754345,64754025,64753682,64753187,64752504,64752071,64751655,64751466,64750583,64747358,64746987,64746808	Gene ID= ENSG00000068976.13 TPM= 30.8 Transcript Type= protein_coding
chr11	64746389	64759210	64746389	64759210	-	transcript3111.chr11.nic@PYGM	transcript3111.chr11.nic	protein_coding	64758603,64758437,64758246,64757779,64755447,64755273,64754693,64754253,64753879,64753519,64753073,64752403,64751924,64751597,64751325,64750376,64747224,64746921,64746389	64759210,64758515,64758349,64757910,64755558,64755355,64754836,64754345,64754025,64753682,64753187,64752504,64752071,64751655,64751466,64750583,64747358,64746987,64746808	Gene ID= ENSG00000068976.13 TPM= 20.18 Transcript Type= NA
chr11	64764606	64778786	64764606	64778786	-	ENST00000334944.9@SF1	ENST00000334944.9	protein_coding	64778362,64776498,64773430,64770256,64769964,64769426,64769223,64769022,64768106,64767571,64767192,64766900,64765951,64764606	64778786,64776626,64773505,64770408,64770053,64769609,64769338,64769129,64768286,64767844,64767251,64767079,64766155,64765518	Gene ID= ENSG00000168066.20 TPM= 6.37 Transcript Type= protein_coding
chr11	64764606	64778747	64764606	64778747	-	ENST00000448404.5@SF1	ENST00000448404.5	protein_coding	64778362,64776498,64770256,64769964,64769426,64769223,64769022,64768106,64767567,64767192,64766900,64764606	64778747,64776626,64770408,64770053,64769609,64769338,64769129,64768286,64767844,64767251,64767079,64765518	Gene ID= ENSG00000168066.20 TPM= 11.68 Transcript Type= nonsense_mediated_decay
chr11	64771048	64774976	64771048	64774976	+	transcript3124.chr11.nnic@NA	transcript3124.chr11.nnic	NA	64771048	64774976	Gene ID= novel_gene_chr11_3125 TPM= 5.31 Transcript Type= NA
chr11	64785590	64788641	64785590	64788641	-	transcript3126.chr11.nnic@NA	transcript3126.chr11.nnic	NA	64785590	64788641	Gene ID= novel_gene_chr11_3127 TPM= 3.19 Transcript Type= NA
chr11	64784914	64803241	64784914	64803241	-	ENST00000294066.6@MAP4K2	ENST00000294066.6	protein_coding	64803054,64802885,64802563,64802419,64802066,64801710,64801579,64801111,64800900,64800764,64800311,64800109,64799605,64799421,64798794,64797626,64797501,64797275,64797104,64796982,64796809,64796634,64796493,64796273,64792364,64792172,64791909,64790394,64790188,64789889,64789730,64784914	64803241,64802942,64802653,64802483,64802121,64801757,64801621,64801183,64801031,64800826,64800392,64800216,64799683,64799479,64798837,64797664,64797534,64797380,64797192,64797023,64796893,64796713,64796553,64796390,64792422,64792275,64792086,64790462,64790274,64789959,64789785,64789624	Gene ID= ENSG00000168067.11 TPM= 3.19 Transcript Type= protein_coding
chr11	64803516	64810741	64803516	64810741	-	ENST00000315422.8@MEN1	ENST00000315422.8	protein_coding	64810268,64809665,64807891,64807552,64807179,64807011,64806232,64805635,64805034,64803516	64810741,64810132,64808099,64807680,64807219,64807098,64806368,64805770,64805198,64804816	Gene ID= ENSG00000133895.14 TPM= 6.9 Transcript Type= protein_coding
chr11	64803516	64810560	64803516	64810560	-	transcript3134.chr11.nic@MEN1	transcript3134.chr11.nic	protein_coding	64810526,64809665,64807891,64807552,64807179,64807011,64806232,64805635,64805034,64803516	64810560,64810132,64808099,64807680,64807219,64807098,64806368,64805770,64805198,64804816	Gene ID= ENSG00000133895.14 TPM= 6.9 Transcript Type= NA
chr11	64851642	64878719	64851642	64878719	-	ENST00000320631.7@EHD1	ENST00000320631.7	protein_coding	64878061,64874421,64859924,64855322,64851642	64878719,64874518,64860336,64855486,64854857	Gene ID= ENSG00000110047.17 TPM= 26.55 Transcript Type= protein_coding
chr11	64924671	64934473	64924671	64934473	+	ENST00000164133.6@PPP2R5B	ENST00000164133.6	protein_coding	64924671,64925471,64926712,64927802,64928066,64928295,64930322,64930481,64931436,64931559,64931749,64932765,64933145,64933697	64925028,64925933,64926908,64927903,64928158,64928425,64930381,64930589,64931489,64931609,64931868,64932892,64933246,64934473	Gene ID= ENSG00000068971.13 TPM= 52.58 Transcript Type= protein_coding
chr11	64924689	64934473	64924689	64934473	+	transcript3151.chr11.nic@PPP2R5B	transcript3151.chr11.nic	protein_coding	64924689,64925848,64926712,64927802,64928066,64928295,64930322,64930481,64931436,64931559,64931749,64932765,64933145,64933697	64925028,64925933,64926908,64927903,64928158,64928425,64930381,64930589,64931489,64931609,64931868,64932892,64933246,64934473	Gene ID= ENSG00000068971.13 TPM= 20.71 Transcript Type= NA
chr11	64924672	64934473	64924672	64934473	+	transcript3152.chr11.nic@PPP2R5B	transcript3152.chr11.nic	protein_coding	64924672,64925471,64926712,64927802,64928066,64928295,64930322,64930481,64931436,64931749,64932765,64933145,64933697	64925028,64925933,64926908,64927903,64928158,64928425,64930381,64930589,64931609,64931868,64932892,64933246,64934473	Gene ID= ENSG00000068971.13 TPM= 6.37 Transcript Type= NA
chr11	65014113	65022184	65014113	65022184	+	ENST00000246747.8@ARL2	ENST00000246747.8	protein_coding	65014113,65018364,65018571,65020419,65021721	65014272,65018474,65018733,65020499,65022184	Gene ID= ENSG00000213465.7 TPM= 268.2 Transcript Type= protein_coding
chr11	65014192	65022160	65014192	65022160	+	ENST00000533729.1@ARL2	ENST00000533729.1	protein_coding	65014192,65018364,65018571,65021721	65014272,65018474,65018733,65022160	Gene ID= ENSG00000213465.7 TPM= 11.68 Transcript Type= protein_coding
chr11	65014180	65022184	65014180	65022184	+	ENST00000529384.5@ARL2	ENST00000529384.5	protein_coding	65014180,65018364,65018571,65020419,65021721,65021971	65014272,65018474,65018733,65020499,65021888,65022184	Gene ID= ENSG00000213465.7 TPM= 5.84 Transcript Type= protein_coding
chr11	65027458	65040572	65027458	65040572	+	transcript3160.chr11.nic@SNX15	transcript3160.chr11.nic	protein_coding	65027458,65032431,65034847,65035059,65035520,65038572,65039686	65027636,65032551,65034962,65035206,65035663,65038829,65040572	Gene ID= ENSG00000110025.12 TPM= 18.06 Transcript Type= NA
chr11	65040904	65044827	65040904	65044827	+	ENST00000398846.5@SAC3D1	ENST00000398846.5	protein_coding	65040904,65044225	65041866,65044827	Gene ID= ENSG00000168061.14 TPM= 7.97 Transcript Type= protein_coding
chr11	65040953	65044828	65040953	65044828	+	ENST00000528109.5@SAC3D1	ENST00000528109.5	protein_coding	65040953,65044225	65041866,65044828	Gene ID= ENSG00000168061.14 TPM= 4.78 Transcript Type= processed_transcript
chr11	65044822	65047888	65044822	65047888	-	transcript3171.chr11.nic@NAALADL1	transcript3171.chr11.nic	protein_coding	65047647,65046189,65046027,65044822	65047888,65046362,65046114,65045914	Gene ID= ENSG00000168060.15 TPM= 2.12 Transcript Type= NA
chr11	65077452	65084151	65077452	65084151	-	ENST00000275517.7@CDCA5	ENST00000275517.7	protein_coding	65083933,65083629,65083485,65083364,65079353,65077452	65084151,65083723,65083550,65083399,65079787,65079187	Gene ID= ENSG00000146670.9 TPM= 1.06 Transcript Type= protein_coding
chr11	65084210	65088400	65084210	65088400	+	transcript3178.chr11.nic@ZFPL1	transcript3178.chr11.nic	protein_coding	65084210,65084691,65085115,65086720,65086928,65087316,65087928	65084378,65084800,65086608,65086792,65087074,65087433,65088400	Gene ID= ENSG00000162300.11 TPM= 6.37 Transcript Type= NA
chr11	65084235	65088400	65084235	65088400	+	ENST00000294258.7@ZFPL1	ENST00000294258.7	protein_coding	65084235,65084691,65085115,65086415,65086720,65086928,65087316,65087928	65084378,65084800,65085226,65086608,65086792,65087074,65087433,65088400	Gene ID= ENSG00000162300.11 TPM= 23.37 Transcript Type= protein_coding
chr11	65084223	65085012	65084223	65085012	+	ENST00000525509.1@ZFPL1	ENST00000525509.1	protein_coding	65084223,65084691	65084378,65085012	Gene ID= ENSG00000162300.11 TPM= 3.19 Transcript Type= protein_coding
chr11	65096159	65111860	65096159	65111860	+	ENST00000279281.7@VPS51	ENST00000279281.7	protein_coding	65096159,65096998,65107581,65107803,65108197,65109280,65109705,65110482,65110694,65111327	65096478,65097127,65107727,65108022,65108914,65109495,65109923,65110603,65110781,65111860	Gene ID= ENSG00000149823.8 TPM= 4.25 Transcript Type= protein_coding
chr11	65109387	65111707	65109387	65111707	+	transcript3204.chr11.nnic@VPS51	transcript3204.chr11.nnic	protein_coding	65109387,65109447,65109705,65110482,65110694,65111327	65109401,65109495,65109923,65110603,65110781,65111707	Gene ID= ENSG00000149823.8 TPM= 20.18 Transcript Type= NA
chr11	65106736	65109416	65106736	65109416	-	transcript3205.chr11.nnic@NA	transcript3205.chr11.nnic	NA	65106736	65109416	Gene ID= novel_gene_chr11_3206 TPM= 2.12 Transcript Type= NA
chr11	65111854	65116356	65111854	65116356	+	ENST00000279263.11@TM7SF2	ENST00000279263.11	protein_coding	65111854,65112515,65112811,65113220,65113491,65114713,65114913,65115314,65115476,65115893	65112067,65112711,65112865,65113414,65113594,65114832,65115081,65115394,65115598,65116356	Gene ID= ENSG00000149809.14 TPM= 2.12 Transcript Type= protein_coding
chr11	65111872	65116230	65111872	65116230	+	transcript3192.chr11.nic@TM7SF2	transcript3192.chr11.nic	protein_coding	65111872,65112515,65112811,65113220,65113491,65114713,65114913,65115314,65115476,65115893	65111981,65112711,65112865,65113414,65113594,65114832,65115081,65115394,65115598,65116230	Gene ID= ENSG00000149809.14 TPM= 26.55 Transcript Type= NA
chr11	65111865	65116230	65111865	65116230	+	transcript3199.chr11.nic@TM7SF2	transcript3199.chr11.nic	protein_coding	65111865,65112515,65113220,65113491,65114713,65114913,65115314,65115476,65115893	65112067,65112865,65113414,65113594,65114832,65115081,65115394,65115598,65116230	Gene ID= ENSG00000149809.14 TPM= 13.81 Transcript Type= NA
chr11	65111884	65116235	65111884	65116235	+	ENST00000345348.9@TM7SF2	ENST00000345348.9	protein_coding	65111884,65112515,65112811,65113220,65113491,65114713,65114913,65115476,65115893	65112067,65112711,65112865,65113414,65113594,65114832,65115081,65115598,65116235	Gene ID= ENSG00000149809.14 TPM= 7.44 Transcript Type= protein_coding
chr11	65116403	65117708	65116403	65117708	-	ENST00000310597.5@ZNHIT2	ENST00000310597.5	protein_coding	65116403	65117708	Gene ID= ENSG00000174276.6 TPM= 18.06 Transcript Type= protein_coding
chr11	65120628	65122473	65120628	65122473	-	ENST00000529639.5@FAU	ENST00000529639.5	protein_coding	65122090,65121739,65121500,65120981,65120628	65122473,65121821,65121644,65121036,65120806	Gene ID= ENSG00000149806.10 TPM= 272.44 Transcript Type= protein_coding
chr11	65120630	65122057	65120630	65122057	-	ENST00000531743.5@FAU	ENST00000531743.5	protein_coding	65121739,65121500,65120981,65120630	65122057,65121644,65121036,65120806	Gene ID= ENSG00000149806.10 TPM= 16.46 Transcript Type= protein_coding
chr11	65127282	65130345	65127282	65130345	-	transcript3208.chr11.nic@SYVN1	transcript3208.chr11.nic	protein_coding	65130251,65130002,65129729,65128563,65127282	65130345,65130172,65129915,65128714,65128488	Gene ID= ENSG00000162298.18 TPM= 13.81 Transcript Type= NA
chr11	65122328	65127371	65122328	65127371	+	ENST00000279242.6@MRPL49	ENST00000279242.6	protein_coding	65122328,65124502,65125488,65125726	65122424,65124652,65125612,65127371	Gene ID= ENSG00000149792.8 TPM= 97.72 Transcript Type= protein_coding
chr11	65181194	65212006	65181194	65212006	+	ENST00000533820.5@CAPN1	ENST00000533820.5	protein_coding	65181194,65182701,65183128,65183474,65185917,65186170,65187215,65187955,65188414,65188586,65204683,65205710,65206463,65206780,65208055,65208205,65209323,65209849,65210018,65210336,65210814,65211260	65181410,65182968,65183197,65183592,65186050,65186338,65187298,65188040,65188488,65188746,65204858,65205721,65206674,65206819,65208120,65208262,65209387,65209917,65210096,65210452,65210872,65212006	Gene ID= ENSG00000014216.15 TPM= 26.55 Transcript Type= protein_coding
chr11	65181681	65212001	65181681	65212001	+	transcript3217.chr11.nic@CAPN1	transcript3217.chr11.nic	protein_coding	65181681,65182701,65183128,65183474,65185917,65186170,65187215,65187955,65188414,65188586,65204683,65205710,65206463,65206780,65208055,65208205,65209323,65209849,65210018,65210336,65210814,65211260	65181782,65182968,65183197,65183592,65186050,65186338,65187298,65188040,65188488,65188746,65204858,65205721,65206674,65206819,65208120,65208262,65209387,65209917,65210096,65210452,65210872,65212001	Gene ID= ENSG00000014216.15 TPM= 23.37 Transcript Type= NA
chr11	65181745	65212001	65181745	65212001	+	ENST00000524773.5@CAPN1	ENST00000524773.5	protein_coding	65181745,65182701,65183128,65183474,65185917,65186170,65187215,65187955,65188414,65188586,65204683,65205710,65206463,65206780,65208055,65208205,65209323,65209849,65210018,65210336,65210814,65211260	65181843,65182968,65183197,65183592,65186050,65186338,65187298,65188040,65188488,65188746,65204858,65205721,65206674,65206819,65208120,65208262,65209387,65209917,65210096,65210452,65210872,65212001	Gene ID= ENSG00000014216.15 TPM= 21.24 Transcript Type= protein_coding
chr11	65181872	65212005	65181872	65212005	+	ENST00000279247.10@CAPN1	ENST00000279247.10	protein_coding	65181872,65182701,65183128,65183474,65185917,65186170,65187215,65187955,65188414,65188586,65204683,65205710,65206463,65206780,65208055,65208205,65209323,65209849,65210018,65210336,65210814,65211260	65182013,65182968,65183197,65183592,65186050,65186338,65187298,65188040,65188488,65188746,65204858,65205721,65206674,65206819,65208120,65208262,65209387,65209917,65210096,65210452,65210872,65212005	Gene ID= ENSG00000014216.15 TPM= 94.53 Transcript Type= protein_coding
chr11	65261762	65298685	65261762	65298685	+	ENST00000265465.7@POLA2	ENST00000265465.7	protein_coding	65261762,65266582,65267477,65268672,65275892,65278730,65279538,65280992,65281670,65282479,65287716,65289050,65289799,65294153,65294546,65295540,65295864,65297120	65262371,65266706,65267568,65268729,65275998,65278923,65279626,65281147,65281732,65282521,65287840,65289088,65289872,65294261,65294652,65295599,65295990,65298685	Gene ID= ENSG00000014138.8 TPM= 1.06 Transcript Type= protein_coding
chr11	65314818	65322429	65314818	65322429	+	ENST00000279249.2@CDC42EP2	ENST00000279249.2	protein_coding	65314818,65320544	65314954,65322429	Gene ID= ENSG00000149798.4 TPM= 6.37 Transcript Type= protein_coding
chr11	65333867	65352983	65333867	65352983	+	ENST00000252268.8@DPF2	ENST00000252268.8	protein_coding	65333867,65340385,65340966,65341399,65343745,65343991,65344580,65345666,65345930,65346247,65348850,65351683	65333918,65340545,65341073,65341562,65343837,65344069,65344621,65345803,65346058,65346359,65348931,65352983	Gene ID= ENSG00000133884.9 TPM= 76.48 Transcript Type= protein_coding
chr11	65371375	65373668	65371375	65373668	-	transcript3238.chr11.nnic@NA	transcript3238.chr11.nnic	NA	65371375	65373668	Gene ID= novel_gene_chr11_3239 TPM= 5.31 Transcript Type= NA
chr11	65375625	65376090	65375625	65376090	+	transcript3236.chr11.nnic@NA	transcript3236.chr11.nnic	NA	65375625	65376090	Gene ID= novel_gene_chr11_3237 TPM= 11.68 Transcript Type= NA
chr11	65386599	65413525	65386599	65413525	+	ENST00000317568.9@FRMD8	ENST00000317568.9	protein_coding	65386599,65387037,65389361,65393573,65394041,65394259,65396799,65399736,65400724,65404864,65411242	65386761,65387121,65389528,65393674,65394099,65394425,65397020,65399859,65400867,65405068,65413525	Gene ID= ENSG00000126391.13 TPM= 54.17 Transcript Type= protein_coding
chr11	65420759	65422066	65420759	65422066	-	transcript3260.chr11.nnic@NA	transcript3260.chr11.nnic	NA	65420759	65422066	Gene ID= novel_gene_chr11_3261 TPM= 4.25 Transcript Type= NA
chr11	65423568	65426525	65423568	65426525	+	transcript3246.chr11.nnic@NA	transcript3246.chr11.nnic	NA	65423568	65426525	Gene ID= novel_gene_chr11_3247 TPM= 205.53 Transcript Type= NA
chr11	65424891	65428843	65424891	65428843	+	transcript3250.chr11.nnic@NA	transcript3250.chr11.nnic	NA	65424891	65428843	Gene ID= novel_gene_chr11_3251 TPM= 26.02 Transcript Type= NA
chr11	65426354	65433021	65426354	65433021	+	transcript3252.chr11.nnic@NA	transcript3252.chr11.nnic	NA	65426354	65433021	Gene ID= novel_gene_chr11_3253 TPM= 112.59 Transcript Type= NA
chr11	65436469	65440487	65436469	65440487	+	transcript3248.chr11.nnic@NA	transcript3248.chr11.nnic	NA	65436469	65440487	Gene ID= novel_gene_chr11_3249 TPM= 82.85 Transcript Type= NA
chr11	65498223	65499691	65498223	65499691	+	transcript3286.chr11.nnic@NA	transcript3286.chr11.nnic	NA	65498223	65499691	Gene ID= novel_gene_chr11_3287 TPM= 2000.05 Transcript Type= NA
chr11	65499043	65502993	65499043	65502993	+	transcript3290.chr11.nnic@NA	transcript3290.chr11.nnic	NA	65499043	65502993	Gene ID= novel_gene_chr11_3291 TPM= 496.03 Transcript Type= NA
chr11	65502620	65505566	65502620	65505566	-	transcript3274.chr11.nnic@NA	transcript3274.chr11.nnic	NA	65504324,65504131,65502620	65505566,65504206,65503799	Gene ID= novel_gene_chr11_3275 TPM= 23.37 Transcript Type= NA
chr11	65525085	65538704	65525085	65538704	+	ENST00000420247.6@SCYL1	ENST00000420247.6	protein_coding	65525085,65525574,65525921,65526124,65526783,65526962,65530629,65531576,65532692,65535227,65535953,65536259,65536586,65537037,65537809,65537967,65538270,65538442	65525264,65525714,65526043,65526350,65526873,65527117,65530787,65531683,65532805,65535382,65536141,65536334,65536750,65537128,65537880,65538182,65538324,65538704	Gene ID= ENSG00000142186.16 TPM= 44.19 Transcript Type= protein_coding
chr11	65525077	65538704	65525077	65538704	+	ENST00000270176.9@SCYL1	ENST00000270176.9	protein_coding	65525077,65525574,65525921,65526124,65526783,65526962,65530629,65531576,65532692,65535227,65535953,65536259,65536586,65536986,65537809,65537967,65538270,65538442	65525264,65525714,65526043,65526350,65526873,65527117,65530787,65531683,65532805,65535382,65536141,65536334,65536750,65537128,65537880,65538182,65538324,65538704	Gene ID= ENSG00000142186.16 TPM= 55.07 Transcript Type= protein_coding
chr11	65525077	65538704	65525077	65538704	+	ENST00000525364.5@SCYL1	ENST00000525364.5	protein_coding	65525077,65525574,65525921,65526124,65526783,65526962,65530629,65531576,65532692,65535227,65535953,65536259,65536586,65536986,65537812,65537967,65538442	65525264,65525714,65526043,65526350,65526873,65527117,65530787,65531683,65532805,65535382,65536141,65536334,65536750,65537128,65537880,65538182,65538704	Gene ID= ENSG00000142186.16 TPM= 7.28 Transcript Type= protein_coding
chr11	65525083	65538703	65525083	65538703	+	transcript3335.chr11.nnic@SCYL1	transcript3335.chr11.nnic	protein_coding	65525083,65525574,65525921,65526124,65526783,65526962,65530629,65531576,65532692,65535227,65535953,65536259,65536586,65537037,65537809,65537967,65538442	65525264,65525714,65526043,65526350,65526873,65527117,65530787,65531683,65532805,65535382,65536141,65536334,65536750,65537128,65537880,65538087,65538703	Gene ID= ENSG00000142186.16 TPM= 6.21 Transcript Type= NA
chr11	65538818	65549777	65538818	65549777	-	transcript3344.chr11.nic@LTBP3	transcript3344.chr11.nic	protein_coding	65547920,65547690,65547439,65546798,65546442,65543427,65543105,65541600,65541126,65540871,65540486,65540245,65539720,65539548,65539328,65538818	65549777,65547821,65547567,65546920,65546564,65543549,65543224,65541728,65541293,65540954,65540614,65540382,65539881,65539628,65539459,65539231	Gene ID= ENSG00000168056.15 TPM= 87.1 Transcript Type= NA
chr11	65570478	65574190	65570478	65574190	+	transcript3381.chr11.nic@SSSCA1	transcript3381.chr11.nic	protein_coding	65570478,65570604,65570886,65571391,65573353	65570510,65570755,65570970,65572960,65574190	Gene ID= ENSG00000173465.7 TPM= 3.19 Transcript Type= NA
chr11	65570473	65574192	65570473	65574192	+	transcript3384.chr11.nic@SSSCA1	transcript3384.chr11.nic	protein_coding	65570473,65570604,65570886,65572443,65573363	65570510,65570755,65570970,65572960,65574192	Gene ID= ENSG00000173465.7 TPM= 4.78 Transcript Type= NA
chr11	65570430	65571770	65570430	65571770	+	ENST00000309328.7@SSSCA1	ENST00000309328.7	protein_coding	65570430,65570604,65570886,65571391	65570510,65570755,65570970,65571770	Gene ID= ENSG00000173465.7 TPM= 37.18 Transcript Type= protein_coding
chr11	65572530	65574190	65572530	65574190	+	transcript3392.chr11.nnic@FAM89B	transcript3392.chr11.nnic	protein_coding	65572530,65573497	65572960,65574190	Gene ID= ENSG00000176973.7 TPM= 6.72 Transcript Type= NA
chr11	65572462	65574190	65572462	65574190	+	ENST00000449319.2@FAM89B	ENST00000449319.2	protein_coding	65572462,65573353	65572960,65574190	Gene ID= ENSG00000176973.7 TPM= 66.74 Transcript Type= protein_coding
chr11	65572528	65574192	65572528	65574192	+	ENST00000530349.1@FAM89B	ENST00000530349.1	protein_coding	65572528,65573363	65572960,65574192	Gene ID= ENSG00000176973.7 TPM= 85.85 Transcript Type= protein_coding
chr11	65575338	65575869	65575338	65575869	-	transcript3397.chr11.nnic@NA	transcript3397.chr11.nnic	NA	65575338	65575869	Gene ID= novel_gene_chr11_3398 TPM= 2.12 Transcript Type= NA
chr11	65576008	65592650	65576008	65592650	+	transcript3354.chr11.nic@EHBP1L1	transcript3354.chr11.nic	protein_coding	65576008,65579078,65579341,65579936,65580081,65580337,65580928,65581058,65581211,65581539,65583592,65584241,65584486,65584959,65589751,65589936,65590087,65590493,65591800,65591976,65592203	65576406,65579135,65579436,65579989,65580259,65580479,65580963,65581126,65581373,65581965,65583765,65584398,65584534,65585591,65589820,65589991,65590210,65590592,65591873,65592090,65592650	Gene ID= ENSG00000173442.12 TPM= 24.88 Transcript Type= NA
chr11	65576008	65592650	65576008	65592650	+	transcript3356.chr11.nnic@EHBP1L1	transcript3356.chr11.nnic	protein_coding	65576008,65579078,65579341,65579936,65580081,65580337,65580928,65581058,65581211,65583592,65584241,65584486,65584959,65589751,65589936,65590087,65590493,65591800,65591976,65592203	65576406,65579135,65579436,65579989,65580259,65580479,65580963,65581126,65581326,65583765,65584398,65584534,65585591,65589820,65589991,65590210,65590592,65591873,65592090,65592650	Gene ID= ENSG00000173442.12 TPM= 24.88 Transcript Type= NA
chr11	65576008	65592650	65576008	65592650	+	transcript3358.chr11.nic@EHBP1L1	transcript3358.chr11.nic	protein_coding	65576008,65579078,65579341,65579936,65580081,65580337,65580928,65581058,65581211,65581539,65584241,65584486,65584959,65589751,65589936,65590087,65590493,65591800,65591976,65592203	65576406,65579135,65579436,65579989,65580259,65580479,65580963,65581126,65581373,65583765,65584398,65584534,65585591,65589820,65589991,65590210,65590592,65591873,65592090,65592650	Gene ID= ENSG00000173442.12 TPM= 58.15 Transcript Type= NA
chr11	65576008	65592650	65576008	65592650	+	transcript3362.chr11.nnic@EHBP1L1	transcript3362.chr11.nnic	protein_coding	65576008,65579078,65579341,65579936,65580081,65580337,65580928,65581058,65581211,65584241,65584486,65584959,65589751,65589936,65590087,65590493,65591800,65591976,65592203	65576406,65579135,65579436,65579989,65580259,65580479,65580963,65581126,65581326,65584398,65584534,65585591,65589820,65589991,65590210,65590592,65591873,65592090,65592650	Gene ID= ENSG00000173442.12 TPM= 21.69 Transcript Type= NA
chr11	65576047	65579839	65576047	65579839	+	transcript3393.chr11.nnic@NA	transcript3393.chr11.nnic	NA	65576047	65579839	Gene ID= novel_gene_chr11_3394 TPM= 3.19 Transcript Type= NA
chr11	65608632	65614236	65608632	65614236	-	ENST00000527304.1@MAP3K11	ENST00000527304.1	protein_coding	65608632	65614236	Gene ID= ENSG00000173327.7 TPM= 10.62 Transcript Type= retained_intron
chr11	65597755	65614242	65597755	65614242	-	ENST00000309100.7@MAP3K11	ENST00000309100.7	protein_coding	65613018,65608268,65607922,65607641,65607270,65606691,65605946,65605761,65599394,65597755	65614242,65608448,65608070,65607816,65607513,65606804,65606081,65605852,65599768,65598628	Gene ID= ENSG00000173327.7 TPM= 60.54 Transcript Type= protein_coding
chr11	65599794	65601767	65599794	65601767	+	transcript3395.chr11.nnic@NA	transcript3395.chr11.nnic	NA	65599794	65601767	Gene ID= novel_gene_chr11_3396 TPM= 2.12 Transcript Type= NA
chr11	65636275	65637439	65636275	65637439	+	transcript3400.chr11.nic@PCNX3	transcript3400.chr11.nic	protein_coding	65636275,65636766	65636689,65637439	Gene ID= ENSG00000197136.4 TPM= 3.19 Transcript Type= NA
chr11	65615773	65637439	65615773	65637439	+	ENST00000355703.3@PCNX3	ENST00000355703.3	protein_coding	65615773,65616824,65617250,65617470,65617611,65617940,65619537,65619754,65620339,65620831,65622245,65623491,65623929,65624195,65624471,65624925,65625171,65625405,65625652,65625904,65626904,65627405,65628595,65628819,65629357,65629520,65630351,65634126,65634538,65634973,65635218,65635529,65636174,65636391,65636766	65616464,65617011,65617349,65617509,65617706,65619067,65619660,65619932,65620429,65620966,65622366,65623644,65623961,65624366,65624581,65625016,65625280,65625510,65625744,65626054,65627048,65627582,65628703,65628948,65629415,65629735,65630604,65634356,65634641,65635120,65635448,65635803,65636307,65636689,65637439	Gene ID= ENSG00000197136.4 TPM= 33.99 Transcript Type= protein_coding
chr11	65638097	65650930	65638097	65650930	+	ENST00000534313.5@SIPA1	ENST00000534313.5	protein_coding	65638097,65640831,65642250,65642463,65644955,65645854,65646221,65646456,65647384,65649262,65649561,65649757,65649950,65650138,65650401,65650569	65638182,65641600,65642377,65642639,65645129,65645957,65646378,65647065,65647658,65649480,65649672,65649865,65650051,65650192,65650479,65650930	Gene ID= ENSG00000213445.9 TPM= 38.24 Transcript Type= protein_coding
chr11	65662969	65671718	65662969	65671718	+	transcript3415.chr11.nnic@NA	transcript3415.chr11.nnic	NA	65662969,65665421,65666131,65671423	65663148,65665543,65666217,65671718	Gene ID= novel_gene_chr11_3416 TPM= 3.19 Transcript Type= NA
chr11	65711996	65719604	65711996	65719604	+	ENST00000377046.7@KAT5	ENST00000377046.7	protein_coding	65711996,65712379,65712766,65712922,65713348,65713593,65713774,65714495,65714821,65716667,65716889,65718590,65718873,65719047	65712279,65712445,65712834,65713058,65713503,65713667,65713848,65714743,65714910,65716807,65716982,65718749,65718954,65719604	Gene ID= ENSG00000172977.12 TPM= 32.93 Transcript Type= protein_coding
chr11	65712018	65719604	65712018	65719604	+	ENST00000352980.8@KAT5	ENST00000352980.8	protein_coding	65712018,65712379,65712766,65712922,65713593,65713774,65714495,65714821,65716667,65716889,65718590,65718873,65719047	65712279,65712445,65712834,65713058,65713667,65713848,65714743,65714910,65716807,65716982,65718749,65718954,65719604	Gene ID= ENSG00000172977.12 TPM= 49.39 Transcript Type= protein_coding
chr11	65712034	65719602	65712034	65719602	+	ENST00000341318.8@KAT5	ENST00000341318.8	protein_coding	65712034,65712766,65712922,65713348,65713593,65713774,65714495,65714821,65716667,65716889,65718590,65718873,65719047	65712445,65712834,65713058,65713503,65713667,65713848,65714743,65714910,65716807,65716982,65718749,65718954,65719602	Gene ID= ENSG00000172977.12 TPM= 10.62 Transcript Type= protein_coding
chr11	65712620	65719603	65712620	65719603	+	ENST00000534650.5@KAT5	ENST00000534650.5	protein_coding	65712620,65712922,65713593,65713774,65714495,65714821,65716667,65716889,65718590,65718873,65719047	65712834,65713058,65713667,65713848,65714743,65714910,65716807,65716982,65718749,65718954,65719603	Gene ID= ENSG00000172977.12 TPM= 4.78 Transcript Type= protein_coding
chr11	65717673	65720947	65717673	65720947	-	ENST00000308418.8@RNASEH2C	ENST00000308418.8	protein_coding	65720587,65720242,65720045,65717673	65720947,65720417,65720164,65719809	Gene ID= ENSG00000172922.8 TPM= 26.55 Transcript Type= protein_coding
chr11	65773897	65779466	65773897	65779466	-	transcript3445.chr11.nnic@NA	transcript3445.chr11.nnic	NA	65773897	65779466	Gene ID= novel_gene_chr11_3446 TPM= 10.62 Transcript Type= NA
chr11	65854837	65858333	65854837	65858333	-	ENST00000308162.9@CFL1	ENST00000308162.9	protein_coding	65858097,65855935,65855654,65854837	65858333,65856242,65855730,65855448	Gene ID= ENSG00000172757.12 TPM= 394.59 Transcript Type= protein_coding
chr11	65860451	65867653	65860451	65867653	+	transcript3457.chr11.nic@MUS81	transcript3457.chr11.nic	protein_coding	65860451,65860973,65861350,65861947,65862211,65862444,65863065,65863410,65863600,65863804,65864497,65864720,65865017,65865220,65865811,65867257	65860888,65861102,65861435,65862045,65862279,65862529,65863205,65863502,65863721,65863901,65864613,65864815,65865145,65865323,65865894,65867653	Gene ID= ENSG00000172732.11 TPM= 2.12 Transcript Type= NA
chr11	65860432	65866417	65860432	65866417	+	transcript3463.chr11.nic@MUS81	transcript3463.chr11.nic	protein_coding	65860432,65860973,65861350,65861947,65862211,65862444,65863065,65863410,65863600,65864497,65864720,65865115,65865220,65865811,65865986	65860888,65861102,65861435,65862045,65862279,65862529,65863205,65863502,65863901,65864613,65864815,65865145,65865323,65865894,65866417	Gene ID= ENSG00000172732.11 TPM= 3.72 Transcript Type= NA
chr11	65860405	65866439	65860405	65866439	+	ENST00000308110.8@MUS81	ENST00000308110.8	protein_coding	65860405,65860973,65861350,65861947,65862211,65862444,65863065,65863410,65863600,65863804,65864497,65864720,65865017,65865220,65865811,65865986	65860888,65861102,65861435,65862045,65862279,65862529,65863205,65863502,65863721,65863901,65864613,65864815,65865145,65865323,65865894,65866439	Gene ID= ENSG00000172732.11 TPM= 52.58 Transcript Type= protein_coding
chr11	65866825	65872862	65866825	65872862	-	transcript3482.chr11.nnic@EFEMP2	transcript3482.chr11.nnic	protein_coding	65872843,65872683,65872244,65871970,65871157,65870536,65870121,65869857,65868510,65868295,65867861,65866825	65872862,65872762,65872361,65872018,65871363,65870658,65870237,65869976,65868629,65868421,65868056,65867079	Gene ID= ENSG00000172638.12 TPM= 24.56 Transcript Type= NA
chr11	65866441	65872811	65866441	65872811	-	ENST00000531972.5@EFEMP2	ENST00000531972.5	protein_coding	65872683,65872244,65871970,65871157,65870536,65870121,65869857,65868510,65868295,65867861,65866845,65866441	65872811,65872361,65872018,65871363,65870658,65870237,65869976,65868629,65868421,65868056,65867079,65866712	Gene ID= ENSG00000172638.12 TPM= 38.01 Transcript Type= nonsense_mediated_decay
chr11	65866447	65872906	65866447	65872906	-	ENST00000307998.10@EFEMP2	ENST00000307998.10	protein_coding	65872683,65872244,65871970,65871157,65870536,65870121,65869857,65868510,65868295,65867861,65866447	65872906,65872361,65872018,65871363,65870658,65870237,65869976,65868629,65868421,65868056,65867079	Gene ID= ENSG00000172638.12 TPM= 115.55 Transcript Type= protein_coding
chr11	65866447	65872743	65866447	65872743	-	ENST00000528176.5@EFEMP2	ENST00000528176.5	protein_coding	65872683,65872244,65871970,65871157,65870536,65870121,65869857,65868510,65868295,65867861,65866447	65872743,65872361,65872018,65871363,65870658,65870237,65869976,65868629,65868421,65868056,65866712	Gene ID= ENSG00000172638.12 TPM= 3.9 Transcript Type= protein_coding
chr11	65879809	65883741	65879809	65883741	+	ENST00000307886.7@CTSW	ENST00000307886.7	protein_coding	65879809,65880202,65881407,65882175,65882430,65882609,65882779,65883069,65883215,65883508	65879941,65880286,65881520,65882329,65882526,65882689,65882904,65883133,65883424,65883741	Gene ID= ENSG00000172543.7 TPM= 1.06 Transcript Type= protein_coding
chr11	65883921	65888539	65883921	65888539	-	ENST00000357519.8@FIBP	ENST00000357519.8	protein_coding	65888334,65887934,65887600,65886322,65885530,65885078,65884935,65884570,65884392,65883921	65888539,65888132,65887726,65886422,65885663,65885186,65884998,65884656,65884489,65884043	Gene ID= ENSG00000172500.12 TPM= 84.44 Transcript Type= protein_coding
chr11	65883921	65888531	65883921	65888531	-	ENST00000338369.6@FIBP	ENST00000338369.6	protein_coding	65888334,65887934,65887600,65886322,65885509,65885078,65884935,65884570,65884392,65883921	65888531,65888132,65887726,65886422,65885663,65885186,65884998,65884656,65884489,65884043	Gene ID= ENSG00000172500.12 TPM= 11.15 Transcript Type= protein_coding
chr11	65916808	65919117	65916808	65919117	-	ENST00000438576.2@C11orf68	ENST00000438576.2	protein_coding	65918910,65916808	65919117,65918218	Gene ID= ENSG00000175573.6 TPM= 21.24 Transcript Type= protein_coding
chr11	65916810	65919062	65916810	65919062	-	ENST00000449692.3@C11orf68	ENST00000449692.3	protein_coding	65918910,65916810	65919062,65918215	Gene ID= ENSG00000175573.6 TPM= 54.17 Transcript Type= protein_coding
chr11	65919257	65921561	65919257	65921561	+	ENST00000312515.6@DRAP1	ENST00000312515.6	protein_coding	65919257,65919780,65919948,65920343,65920569,65920884,65921330	65919543,65919852,65920041,65920462,65920662,65920972,65921561	Gene ID= ENSG00000175550.7 TPM= 208.71 Transcript Type= protein_coding
chr11	65919724	65921554	65919724	65921554	+	ENST00000532933.1@DRAP1	ENST00000532933.1	protein_coding	65919724,65919948,65920343,65920569,65920884,65921330	65919852,65920041,65920462,65920662,65920972,65921554	Gene ID= ENSG00000175550.7 TPM= 17.53 Transcript Type= protein_coding
chr11	65961689	65979828	65961689	65979828	+	ENST00000312397.9@SART1	ENST00000312397.9	protein_coding	65961689,65964074,65964515,65965092,65965342,65965702,65965887,65966076,65966350,65967259,65967471,65967679,65976395,65976656,65977014,65977563,65977764,65978600,65978793,65979012	65962093,65964131,65964570,65965218,65965447,65965779,65965986,65966218,65966556,65967383,65967586,65967821,65976568,65976766,65977101,65977653,65977899,65978689,65978914,65979828	Gene ID= ENSG00000175467.14 TPM= 65.85 Transcript Type= protein_coding
chr11	65998433	66002217	65998433	66002217	-	transcript3546.chr11.nnic@EIF1AD	transcript3546.chr11.nnic	protein_coding	66002099,66001910,66000303,66000053,65999567,65999350,65998433	66002217,66002007,66000406,66000161,65999675,65999397,65998743	Gene ID= ENSG00000175376.8 TPM= 3.19 Transcript Type= NA
chr11	65997665	66001492	65997665	66001492	-	transcript3551.chr11.nic@EIF1AD	transcript3551.chr11.nic	protein_coding	66000303,66000053,65999567,65999350,65997665	66001492,66000161,65999675,65999397,65998743	Gene ID= ENSG00000175376.8 TPM= 4.25 Transcript Type= NA
chr11	65996545	66002157	65996545	66002157	-	ENST00000312234.6@EIF1AD	ENST00000312234.6	protein_coding	66001910,66000303,66000053,65999567,65999350,65996545	66002157,66000476,66000161,65999675,65999397,65998743	Gene ID= ENSG00000175376.8 TPM= 12.75 Transcript Type= protein_coding
chr11	66002228	66004146	66002228	66004146	+	ENST00000445560.6@BANF1	ENST00000445560.6	protein_coding	66002228,66003235,66003626	66002513,66003373,66004146	Gene ID= ENSG00000175334.7 TPM= 10.83 Transcript Type= protein_coding
chr11	66002079	66004149	66002079	66004149	+	ENST00000312175.6@BANF1	ENST00000312175.6	protein_coding	66002079,66003235,66003626	66002570,66003373,66004149	Gene ID= ENSG00000175334.7 TPM= 121.3 Transcript Type= protein_coding
chr11	66002729	66004146	66002729	66004146	+	transcript3556.chr11.nnic@BANF1	transcript3556.chr11.nnic	protein_coding	66002729,66003235,66003626	66002819,66003373,66004146	Gene ID= ENSG00000175334.7 TPM= 6.59 Transcript Type= NA
chr11	66002480	66004146	66002480	66004146	+	ENST00000524628.1@BANF1	ENST00000524628.1	protein_coding	66002480,66003626	66002570,66004146	Gene ID= ENSG00000175334.7 TPM= 7.44 Transcript Type= processed_transcript
chr11	66041952	66049180	66041952	66049180	-	ENST00000312006.4@GAL3ST3	ENST00000312006.4	protein_coding	66049011,66045291,66041952	66049180,66045527,66043677	Gene ID= ENSG00000175229.6 TPM= 2.12 Transcript Type= protein_coding
chr11	66052331	66069308	66052331	66069308	+	ENST00000528302.5@SF3B2	ENST00000528302.5	protein_coding	66052331,66052673,66053027,66055076,66056838,66057266,66058054,66058314,66058830,66059201,66059515,66059782,66060582,66061686,66061891,66063009,66063400,66063628,66067946,66068148,66068674	66052517,66052719,66053104,66055315,66056955,66057375,66058150,66058405,66059045,66059338,66059595,66060009,66060731,66061775,66061998,66063116,66063542,66063729,66068045,66068333,66069308	Gene ID= ENSG00000087365.15 TPM= 1.59 Transcript Type= protein_coding
chr11	66052336	66068911	66052336	66068911	+	ENST00000322535.10@SF3B2	ENST00000322535.10	protein_coding	66052336,66052673,66053027,66055076,66055535,66056838,66057266,66058054,66058314,66058830,66059201,66059515,66059782,66060582,66061686,66061891,66063009,66063400,66063628,66067946,66068148,66068674	66052517,66052719,66053104,66055315,66055585,66056955,66057375,66058150,66058405,66059045,66059338,66059595,66060009,66060731,66061775,66061998,66063116,66063542,66063729,66068045,66068333,66068911	Gene ID= ENSG00000087365.15 TPM= 161.98 Transcript Type= protein_coding
chr11	66070313	66241637	66070313	66241637	+	transcript3573.chr11.nic@PACS1	transcript3573.chr11.nic	protein_coding	66070313,66193486,66210362,66211134,66216119,66216520,66216695,66219746,66220631,66221154,66227504,66230548,66230805,66232172,66232960,66233785,66234132,66235301,66235898,66238804,66239142,66241427	66070842,66193573,66210451,66211259,66216263,66216611,66216775,66219805,66220791,66221247,66227584,66230663,66230940,66232276,66233066,66233939,66234242,66235403,66235940,66238846,66239277,66241637	Gene ID= ENSG00000175115.11 TPM= 9.03 Transcript Type= NA
chr11	66070313	66221643	66070313	66221643	+	transcript3579.chr11.nic@PACS1	transcript3579.chr11.nic	protein_coding	66070313,66193486,66210362,66211134,66216119,66216520,66216695,66219746,66220631,66221154	66070842,66193573,66210451,66211259,66216263,66216611,66216775,66219805,66220791,66221643	Gene ID= ENSG00000175115.11 TPM= 3.19 Transcript Type= NA
chr11	66070454	66244747	66070454	66244747	+	ENST00000320580.8@PACS1	ENST00000320580.8	protein_coding	66070454,66193486,66210362,66211134,66216119,66216520,66216695,66219746,66220631,66221154,66227504,66230548,66230805,66232172,66232960,66233785,66234132,66235301,66235898,66238804,66239142,66241427,66242912,66243165	66070842,66193573,66210451,66211259,66216263,66216611,66216775,66219805,66220791,66221247,66227584,66230663,66230940,66232276,66233066,66233939,66234242,66235403,66235940,66238846,66239277,66241653,66243031,66244747	Gene ID= ENSG00000175115.11 TPM= 106.75 Transcript Type= protein_coding
chr11	66077705	66079558	66077705	66079558	-	transcript3591.chr11.nnic@NA	transcript3591.chr11.nnic	NA	66077705	66079558	Gene ID= novel_gene_chr11_3592 TPM= 4.25 Transcript Type= NA
chr11	66079305	66081420	66079305	66081420	-	transcript3593.chr11.nnic@NA	transcript3593.chr11.nnic	NA	66079305	66081420	Gene ID= novel_gene_chr11_3594 TPM= 6.37 Transcript Type= NA
chr11	66088190	66088630	66088190	66088630	-	transcript3595.chr11.nnic@NA	transcript3595.chr11.nnic	NA	66088190	66088630	Gene ID= novel_gene_chr11_3596 TPM= 2.12 Transcript Type= NA
chr11	66246137	66247801	66246137	66247801	+	transcript3589.chr11.nnic@NA	transcript3589.chr11.nnic	NA	66246137	66247801	Gene ID= novel_gene_chr11_3590 TPM= 3.19 Transcript Type= NA
chr11	66257765	66267860	66257765	66267860	+	transcript3601.chr11.nnic@KLC2	transcript3601.chr11.nnic	protein_coding	66257765,66258584,66261742,66262123,66262814,66263660,66263851,66264046,66264345,66265023,66265168,66265655,66265854,66266093,66266433,66267171	66257871,66258822,66261972,66262192,66263036,66263747,66263952,66264219,66264444,66265072,66265235,66265763,66266012,66266217,66266490,66267860	Gene ID= ENSG00000174996.11 TPM= 21.95 Transcript Type= NA
chr11	66257758	66267860	66257758	66267860	+	transcript3605.chr11.nnic@KLC2	transcript3605.chr11.nnic	protein_coding	66257758,66258547,66261742,66262123,66262814,66263660,66263851,66264046,66264345,66265023,66265168,66265655,66265854,66266093,66266433,66267171	66257871,66258822,66261972,66262192,66263036,66263747,66263952,66264219,66264444,66265072,66265235,66265763,66266012,66266217,66266490,66267860	Gene ID= ENSG00000174996.11 TPM= 16.64 Transcript Type= NA
chr11	66257703	66267860	66257703	66267860	+	ENST00000316924.9@KLC2	ENST00000316924.9	protein_coding	66257703,66258547,66261742,66262123,66262814,66263660,66263851,66264046,66264345,66265023,66265168,66265655,66265854,66266093,66266433,66266873	66257871,66258822,66261972,66262192,66263036,66263747,66263952,66264219,66264444,66265072,66265235,66265763,66266012,66266217,66266490,66267860	Gene ID= ENSG00000174996.11 TPM= 43.2 Transcript Type= protein_coding
chr11	66268533	66277492	66268533	66277492	+	ENST00000311481.10@RAB1B	ENST00000311481.10	protein_coding	66268533,66271797,66272157,66272365,66275804,66276044	66268693,66271869,66272252,66272460,66275935,66277492	Gene ID= ENSG00000174903.15 TPM= 146.58 Transcript Type= protein_coding
chr11	66284580	66289170	66284580	66289170	-	ENST00000376901.8@YIF1A	ENST00000376901.8	protein_coding	66288955,66288081,66287812,66287598,66285701,66285381,66284873,66284580	66289170,66288292,66287916,66287676,66285758,66285536,66284966,66284783	Gene ID= ENSG00000174851.15 TPM= 210.87 Transcript Type= protein_coding
chr11	66284580	66289169	66284580	66289169	-	transcript3621.chr11.nic@YIF1A	transcript3621.chr11.nic	protein_coding	66288955,66288081,66287812,66285381,66284873,66284580	66289169,66288292,66287916,66287676,66284966,66284783	Gene ID= ENSG00000174851.15 TPM= 5.87 Transcript Type= NA
chr11	66284580	66289145	66284580	66289145	-	ENST00000359461.10@YIF1A	ENST00000359461.10	protein_coding	66288955,66288081,66287812,66287598,66285701,66284873,66284580	66289145,66288292,66287916,66287676,66285758,66284966,66284783	Gene ID= ENSG00000174851.15 TPM= 7.65 Transcript Type= protein_coding
chr11	66284581	66285623	66284581	66285623	-	ENST00000494836.2@YIF1A	ENST00000494836.2	protein_coding	66285381,66284873,66284581	66285623,66284966,66284783	Gene ID= ENSG00000174851.15 TPM= 2.34 Transcript Type= retained_intron
chr11	66314487	66317044	66314487	66317044	-	ENST00000311330.3@CD248	ENST00000311330.3	protein_coding	66314487	66317044	Gene ID= ENSG00000174807.3 TPM= 15.93 Transcript Type= protein_coding
chr11	66332062	66336529	66332062	66336529	-	ENST00000311320.8@RIN1	ENST00000311320.8	protein_coding	66336317,66335978,66335762,66335610,66335407,66334514,66333919,66333527,66333258,66332062	66336529,66336158,66335876,66335682,66335498,66335251,66334224,66333658,66333409,66332752	Gene ID= ENSG00000174791.10 TPM= 1.59 Transcript Type= protein_coding
chr11	66332062	66335753	66332062	66335753	-	transcript3625.chr11.nic@RIN1	transcript3625.chr11.nic	protein_coding	66335610,66335407,66334514,66333919,66333527,66333258,66332062	66335753,66335498,66335251,66334224,66333658,66333409,66332752	Gene ID= ENSG00000174791.10 TPM= 2.66 Transcript Type= NA
chr11	66337339	66345125	66337339	66345125	-	ENST00000359957.7@BRMS1	ENST00000359957.7	protein_coding	66344972,66342096,66341533,66341206,66340967,66340774,66340121,66338721,66338243,66337339	66345125,66342241,66341623,66341333,66341046,66340870,66340213,66338785,66338282,66337889	Gene ID= ENSG00000174744.13 TPM= 22.31 Transcript Type= protein_coding
chr11	66337333	66345119	66337333	66345119	-	ENST00000425825.6@BRMS1	ENST00000425825.6	protein_coding	66344972,66342096,66341533,66341206,66340967,66340774,66340121,66338721,66338243,66337333	66345119,66342241,66341623,66341333,66341046,66340870,66340213,66338785,66338282,66337807	Gene ID= ENSG00000174744.13 TPM= 1.06 Transcript Type= protein_coding
chr11	66345372	66347692	66345372	66347692	-	ENST00000311181.4@B4GAT1	ENST00000311181.4	protein_coding	66346490,66345372	66347692,66346240	Gene ID= ENSG00000174684.6 TPM= 89.22 Transcript Type= protein_coding
chr11	66362523	66372214	66362523	66372214	-	ENST00000546034.1@SLC29A2	ENST00000546034.1	protein_coding	66372010,66371563,66371244,66369369,66369060,66368537,66367772,66367464,66366431,66366126,66365936,66364225,66362523	66372214,66371611,66371325,66369532,66369199,66368671,66367869,66367548,66366564,66366231,66366021,66364424,66363547	Gene ID= ENSG00000174669.11 TPM= 6.37 Transcript Type= protein_coding
chr11	66362522	66371820	66362522	66371820	-	ENST00000357440.6@SLC29A2	ENST00000357440.6	protein_coding	66371563,66371244,66369369,66369060,66368537,66367772,66367464,66366431,66366126,66365936,66364225,66362522	66371820,66371325,66369532,66369199,66368671,66367869,66367548,66366564,66366231,66366021,66364424,66363547	Gene ID= ENSG00000174669.11 TPM= 10.62 Transcript Type= protein_coding
chr11	66435075	66438848	66435075	66438848	-	ENST00000310999.11@MRPL11	ENST00000310999.11	protein_coding	66438632,66438164,66437350,66437104,66435075	66438848,66438259,66437443,66437263,66436112	Gene ID= ENSG00000174547.13 TPM= 2.66 Transcript Type= protein_coding
chr11	66435075	66438848	66435075	66438848	-	ENST00000430466.6@MRPL11	ENST00000430466.6	protein_coding	66438710,66438164,66437350,66437104,66435075	66438848,66438259,66437443,66437263,66436112	Gene ID= ENSG00000174547.13 TPM= 2.66 Transcript Type= protein_coding
chr11	66435838	66438826	66435838	66438826	-	ENST00000534488.5@MRPL11	ENST00000534488.5	protein_coding	66438632,66438164,66437350,66437104,66435838	66438826,66438259,66437435,66437263,66436112	Gene ID= ENSG00000174547.13 TPM= 45.67 Transcript Type= nonsense_mediated_decay
chr11	66466869	66477337	66466869	66477337	+	ENST00000320740.11@PELI3	ENST00000320740.11	protein_coding	66466869,66468128,66468833,66471242,66472369,66473241,66473737,66475598	66467027,66468280,66468904,66471371,66472470,66473435,66473925,66477337	Gene ID= ENSG00000174516.14 TPM= 22.31 Transcript Type= protein_coding
chr11	66477346	66480231	66477346	66480231	-	ENST00000527274.2@AP002748.3	ENST00000527274.2	antisense_RNA	66480039,66477346	66480231,66478096	Gene ID= ENSG00000255517.6 TPM= 1.06 Transcript Type= antisense_RNA
chr11	66480013	66509657	66480013	66509657	+	ENST00000532677.5@DPP3	ENST00000532677.5	protein_coding	66480013,66482196,66485173,66486540,66487268,66487914,66491253,66491494,66491698,66492716,66493067,66493541,66495206,66495365,66495630,66497298,66504612,66509079	66480465,66482470,66485262,66486677,66487342,66488007,66491383,66491624,66491756,66492910,66493179,66493633,66495268,66495489,66495750,66497477,66504774,66509657	Gene ID= ENSG00000254986.7 TPM= 21.24 Transcript Type= protein_coding
chr11	66510609	66533627	66510609	66533627	+	ENST00000318312.11@BBS1	ENST00000318312.11	protein_coding	66510609,66511013,66511205,66514406,66515540,66515693,66515861,66519617,66521270,66523456,66523724,66526123,66526649,66529819,66530894,66531656,66531951	66510706,66511089,66511239,66514678,66515586,66515731,66515933,66519748,66521376,66523576,66523882,66526192,66526807,66529952,66531028,66531742,66533627	Gene ID= ENSG00000174483.19 TPM= 15.93 Transcript Type= protein_coding
chr11	66510634	66528263	66510634	66528263	+	transcript3664.chr11.nnic@BBS1	transcript3664.chr11.nnic	protein_coding	66510634,66511013,66511205,66514406,66515540,66515693,66515861,66519617,66521270,66523456,66523724,66526123,66526649,66528120	66510706,66511089,66511239,66514678,66515586,66515731,66515933,66519748,66521376,66523576,66523882,66526192,66526807,66528263	Gene ID= ENSG00000174483.19 TPM= 3.19 Transcript Type= NA
chr11	66535630	66546166	66535630	66546166	-	transcript3667.chr11.nnic@ZDHHC24	transcript3667.chr11.nnic	protein_coding	66545723,66543704,66537711,66535630	66546166,66543981,66539824,66536653	Gene ID= ENSG00000174165.7 TPM= 5.31 Transcript Type= NA
chr11	66535898	66546238	66535898	66546238	-	ENST00000310442.4@ZDHHC24	ENST00000310442.4	protein_coding	66545723,66543704,66535898	66546238,66543981,66539824	Gene ID= ENSG00000174165.7 TPM= 2.12 Transcript Type= protein_coding
chr11	66563464	66568389	66563464	66568389	-	transcript3672.chr11.nnic@CTSF	transcript3672.chr11.nnic	protein_coding	66568274,66567984,66567444,66567246,66566291,66566022,66565831,66565671,66564887,66564742,66564558,66564088,66563464	66568389,66568082,66567706,66567321,66566404,66566167,66565927,66565751,66565006,66564806,66564648,66564146,66564007	Gene ID= ENSG00000174080.10 TPM= 13.28 Transcript Type= NA
chr11	66563463	66568596	66563463	66568596	-	ENST00000310325.9@CTSF	ENST00000310325.9	protein_coding	66568274,66567984,66567444,66567246,66566291,66566022,66565831,66565671,66564887,66564742,66564558,66564088,66563463	66568596,66568082,66567662,66567321,66566404,66566167,66565927,66565751,66565006,66564806,66564648,66564146,66564007	Gene ID= ENSG00000174080.10 TPM= 222.52 Transcript Type= protein_coding
chr11	66592821	66606019	66592821	66606019	+	ENST00000533244.5@CCS	ENST00000533244.5	protein_coding	66592821,66593642,66599116,66599459,66600489,66605339,66605489,66605702	66593300,66593714,66599253,66599636,66600549,66605416,66605592,66606019	Gene ID= ENSG00000173992.8 TPM= 14.87 Transcript Type= protein_coding
chr11	66593152	66606019	66593152	66606019	+	transcript3677.chr11.nic@CCS	transcript3677.chr11.nic	protein_coding	66593152,66593642,66599116,66605154,66605489,66605702	66593300,66593714,66600549,66605416,66605592,66606019	Gene ID= ENSG00000173992.8 TPM= 4.25 Transcript Type= NA
chr11	66616582	66627347	66616582	66627347	+	ENST00000310137.4@RBM14	ENST00000310137.4	protein_coding	66616582,66624214,66626461	66617057,66625678,66627347	Gene ID= ENSG00000239306.4 TPM= 35.05 Transcript Type= protein_coding
chr11	66616595	66646467	66616595	66646467	+	transcript3680.chr11.nic@RBM14-RBM4	transcript3680.chr11.nic	protein_coding	66616595,66639700,66643450,66646027	66617057,66640123,66644140,66646467	Gene ID= ENSG00000248643.5 TPM= 5.05 Transcript Type= NA
chr11	66616595	66641177	66616595	66641177	+	transcript3689.chr11.nic@RBM14-RBM4	transcript3689.chr11.nic	protein_coding	66616595,66639700	66617057,66641177	Gene ID= ENSG00000248643.5 TPM= 2.12 Transcript Type= NA
chr11	66616626	66646469	66616626	66646469	+	ENST00000412278.2@RBM14-RBM4	ENST00000412278.2	protein_coding	66616626,66643450,66646027	66617057,66644140,66646469	Gene ID= ENSG00000248643.5 TPM= 3.98 Transcript Type= protein_coding
chr11	66616670	66646467	66616670	66646467	+	ENST00000500635.2@RBM14-RBM4	ENST00000500635.2	protein_coding	66616670,66646027	66617057,66646467	Gene ID= ENSG00000248643.5 TPM= 3.72 Transcript Type= protein_coding
chr11	66626665	66629932	66626665	66629932	+	transcript3693.chr11.nnic@NA	transcript3693.chr11.nnic	NA	66626665	66629932	Gene ID= novel_gene_chr11_3694 TPM= 3.19 Transcript Type= NA
chr11	66638617	66646469	66638617	66646469	+	ENST00000310092.11@RBM4	ENST00000310092.11	protein_coding	66638617,66639700,66643450,66646027	66638752,66640123,66644140,66646469	Gene ID= ENSG00000173933.19 TPM= 23.1 Transcript Type= protein_coding
chr11	66638698	66646468	66638698	66646468	+	ENST00000398692.8@RBM4	ENST00000398692.8	protein_coding	66638698,66639700,66646027	66638752,66640123,66646468	Gene ID= ENSG00000173933.19 TPM= 9.03 Transcript Type= protein_coding
chr11	66638672	66646452	66638672	66646452	+	ENST00000408993.6@RBM4	ENST00000408993.6	protein_coding	66638672,66639700,66643450,66646027	66638893,66640123,66644140,66646452	Gene ID= ENSG00000173933.19 TPM= 10.62 Transcript Type= protein_coding
chr11	66638698	66641192	66638698	66641192	+	ENST00000483858.5@RBM4	ENST00000483858.5	protein_coding	66638698,66639700	66638752,66641192	Gene ID= ENSG00000173933.19 TPM= 1.06 Transcript Type= protein_coding
chr11	66638720	66646439	66638720	66646439	+	ENST00000530235.1@RBM4	ENST00000530235.1	protein_coding	66638720,66639700,66646027	66638893,66640123,66646439	Gene ID= ENSG00000173933.19 TPM= 1.06 Transcript Type= protein_coding
chr11	66638935	66646467	66638935	66646467	+	ENST00000409406.1@RBM4	ENST00000409406.1	protein_coding	66638935,66643450,66646027	66640123,66644140,66646467	Gene ID= ENSG00000173933.19 TPM= 1.86 Transcript Type= protein_coding
chr11	66664998	66677921	66664998	66677921	-	ENST00000310046.8@RBM4B	ENST00000310046.8	protein_coding	66677764,66676668,66668615,66664998	66677921,66677091,66669291,66665578	Gene ID= ENSG00000173914.11 TPM= 12.75 Transcript Type= protein_coding
chr11	66744787	66843322	66744787	66843322	+	ENST00000540737.5@C11orf80	ENST00000540737.5	protein_coding	66744787,66759043,66788160,66796281,66800641,66801031,66803995,66813865,66816053,66821643,66822564,66828266,66838370,66842849,66843169	66744919,66759096,66788269,66796364,66800696,66801102,66804190,66814015,66816199,66821764,66822674,66828364,66838445,66843069,66843322	Gene ID= ENSG00000173715.15 TPM= 2.12 Transcript Type= protein_coding
chr11	66843451	66846532	66843451	66846532	+	ENST00000524849.5@RCE1	ENST00000524849.5	protein_coding	66843451,66843759,66843960,66844286,66844869,66845166,66845500,66845860	66843640,66843861,66844039,66844364,66845036,66845237,66845562,66846532	Gene ID= ENSG00000173653.7 TPM= 7.44 Transcript Type= nonsense_mediated_decay
chr11	66848525	66958376	66848525	66958376	-	ENST00000393958.6@PC	ENST00000393958.6	protein_coding	66958322,66952430,66872024,66871687,66871315,66871052,66870775,66870302,66868846,66866187,66863774,66853239,66852747,66852439,66851790,66851040,66850674,66850220,66849937,66849611,66849230,66848525	66958376,66952468,66872159,66871871,66871480,66871197,66870892,66870453,66868964,66866349,66863956,66853383,66852836,66852660,66851946,66851280,66850923,66850464,66850116,66849859,66849370,66849147	Gene ID= ENSG00000173599.13 TPM= 6.37 Transcript Type= protein_coding
chr11	66848526	66958376	66848526	66958376	-	ENST00000393960.5@PC	ENST00000393960.5	protein_coding	66958322,66954249,66952430,66872024,66871687,66871315,66871052,66870775,66870302,66868846,66866187,66863774,66853239,66852747,66852439,66851790,66851040,66850674,66850220,66849937,66849611,66849230,66848526	66958376,66954436,66952468,66872159,66871871,66871480,66871197,66870892,66870453,66868964,66866349,66863956,66853383,66852836,66852660,66851946,66851280,66850923,66850464,66850116,66849859,66849370,66849147	Gene ID= ENSG00000173599.13 TPM= 5.31 Transcript Type= protein_coding
chr11	66856555	66860475	66856555	66860475	+	transcript3704.chr11.nic@LRFN4	transcript3704.chr11.nic	protein_coding	66856555,66857735,66859637	66857296,66859093,66860475	Gene ID= ENSG00000173621.8 TPM= 32.93 Transcript Type= NA
chr11	67023121	67050863	67023121	67050863	+	transcript3713.chr11.nic@SYT12	transcript3713.chr11.nic	protein_coding	67023121,67030122,67030435,67034645,67039811,67043638,67044593,67045744,67048584	67023460,67030178,67030559,67034838,67040203,67043853,67044713,67045877,67050863	Gene ID= ENSG00000173227.13 TPM= 3.19 Transcript Type= NA
chr11	67054195	67056806	67054195	67056806	-	transcript3715.chr11.nnic@NA	transcript3715.chr11.nnic	NA	67054195	67056806	Gene ID= novel_gene_chr11_3716 TPM= 2.12 Transcript Type= NA
chr11	67056818	67072013	67056818	67072013	+	ENST00000308831.6@RHOD	ENST00000308831.6	protein_coding	67056818,67065896,67066738,67070425,67071435	67057034,67065983,67066847,67070559,67072013	Gene ID= ENSG00000173156.6 TPM= 48.86 Transcript Type= protein_coding
chr11	67240047	67256373	67240047	67256373	+	ENST00000530342.2@KDM2A	ENST00000530342.2	protein_coding	67240047,67243009,67245189,67245985,67248281,67250086,67252694,67253453,67254203,67254874	67240369,67243092,67245458,67246116,67248370,67250798,67252857,67253611,67254418,67256373	Gene ID= ENSG00000173120.14 TPM= 4.25 Transcript Type= protein_coding
chr11	67255545	67257983	67255545	67257983	+	transcript3728.chr11.nnic@NA	transcript3728.chr11.nnic	NA	67255545	67257983	Gene ID= novel_gene_chr11_3729 TPM= 2.12 Transcript Type= NA
chr11	67266410	67286556	67266410	67286556	+	ENST00000308595.9@GRK2	ENST00000308595.9	protein_coding	67266410,67277272,67279200,67279418,67279626,67279839,67280732,67281093,67281459,67281650,67281822,67282271,67282435,67282752,67283128,67283707,67283854,67284211,67284847,67285075,67285286	67266812,67277348,67279273,67279519,67279700,67279900,67280783,67281184,67281558,67281728,67281952,67282365,67282542,67282818,67283228,67283773,67283949,67284373,67284983,67285188,67286556	Gene ID= ENSG00000173020.10 TPM= 163.57 Transcript Type= protein_coding
chr11	67268359	67272332	67268359	67272332	-	transcript3753.chr11.nnic@NA	transcript3753.chr11.nnic	NA	67268359	67272332	Gene ID= novel_gene_chr11_3754 TPM= 9.56 Transcript Type= NA
chr11	67274011	67275055	67274011	67275055	-	transcript3755.chr11.nnic@NA	transcript3755.chr11.nnic	NA	67274011	67275055	Gene ID= novel_gene_chr11_3756 TPM= 9.56 Transcript Type= NA
chr11	67274497	67275685	67274497	67275685	-	transcript3757.chr11.nnic@NA	transcript3757.chr11.nnic	NA	67274497	67275685	Gene ID= novel_gene_chr11_3758 TPM= 12.75 Transcript Type= NA
chr11	67289348	67302483	67289348	67302483	+	ENST00000308440.10@ANKRD13D	ENST00000308440.10	protein_coding	67289348,67289829,67290078,67290322,67291476,67291603,67291991,67299058,67299530,67299827,67299993,67300990,67301282,67301488,67301732,67302119	67289550,67289965,67290213,67290446,67291521,67291746,67292180,67299124,67299611,67299888,67300123,67301147,67301398,67301651,67301823,67302483	Gene ID= ENSG00000172932.14 TPM= 6.72 Transcript Type= protein_coding
chr11	67288547	67302481	67288547	67302481	+	ENST00000447274.6@ANKRD13D	ENST00000447274.6	protein_coding	67288547,67290078,67290322,67291476,67291603,67291991,67299058,67299530,67299827,67299993,67300990,67301282,67301488,67301732,67302119	67289550,67290213,67290446,67291521,67291746,67292180,67299124,67299611,67299888,67300123,67301147,67301398,67301651,67301823,67302481	Gene ID= ENSG00000172932.14 TPM= 6.72 Transcript Type= protein_coding
chr11	67291410	67302481	67291410	67302481	+	transcript3744.chr11.nic@ANKRD13D	transcript3744.chr11.nic	protein_coding	67291410,67291603,67291991,67299058,67299530,67299827,67299993,67300990,67301282,67301488,67301732,67302119	67291521,67291746,67292180,67299124,67299611,67299888,67300123,67301147,67301398,67301651,67301823,67302481	Gene ID= ENSG00000172932.14 TPM= 3.54 Transcript Type= NA
chr11	67303448	67312600	67303448	67312600	+	ENST00000308127.8@SSH3	ENST00000308127.8	protein_coding	67303448,67304118,67304773,67306838,67307042,67307371,67307549,67307846,67308174,67308412,67309397,67309768,67310066,67311591	67303691,67304155,67305007,67306962,67307113,67307436,67307737,67307939,67308302,67308458,67309543,67309968,67310339,67312600	Gene ID= ENSG00000172830.12 TPM= 13.81 Transcript Type= protein_coding
chr11	67351548	67353078	67351548	67353078	-	ENST00000533429.1@POLD4	ENST00000533429.1	protein_coding	67352691,67351548	67353078,67352019	Gene ID= ENSG00000175482.8 TPM= 22.31 Transcript Type= retained_intron
chr11	67351548	67353518	67351548	67353518	-	ENST00000530584.5@POLD4	ENST00000530584.5	protein_coding	67353294,67352988,67352691,67351548	67353518,67353077,67352802,67352019	Gene ID= ENSG00000175482.8 TPM= 24.43 Transcript Type= protein_coding
chr11	67351548	67353593	67351548	67353593	-	transcript3776.chr11.nic@AP003419.2	transcript3776.chr11.nic	protein_coding	67352988,67352691,67351548	67353593,67352802,67352019	Gene ID= ENSG00000256514.1 TPM= 14.87 Transcript Type= NA
chr11	67364171	67373020	67364171	67373020	-	transcript3782.chr11.nnic@AP003419.2	transcript3782.chr11.nnic	protein_coding	67372866,67367460,67364171	67373020,67367626,67366067	Gene ID= ENSG00000256514.1 TPM= 3.54 Transcript Type= NA
chr11	67364168	67373020	67364168	67373020	-	transcript3779.chr11.nnic@CLCF1	transcript3779.chr11.nnic	protein_coding	67372866,67367460,67364168	67373020,67367626,67365630	Gene ID= ENSG00000175505.10 TPM= 2.47 Transcript Type= NA
chr11	67364168	67373737	67364168	67373737	-	ENST00000312438.7@CLCF1	ENST00000312438.7	protein_coding	67373524,67367460,67364168	67373737,67367626,67365630	Gene ID= ENSG00000175505.10 TPM= 1.41 Transcript Type= protein_coding
chr11	67391952	67398409	67391952	67398409	+	ENST00000307980.6@RAD9A	ENST00000307980.6	protein_coding	67391952,67392161,67392654,67393496,67393691,67395716,67395912,67396111,67396263,67397179,67397464	67392078,67392231,67392782,67393610,67393790,67395825,67396021,67396175,67396400,67397386,67398409	Gene ID= ENSG00000172613.7 TPM= 6.37 Transcript Type= protein_coding
chr11	67398183	67401793	67398183	67401793	-	ENST00000312989.11@PPP1CA	ENST00000312989.11	protein_coding	67401728,67401068,67400689,67399561,67398940,67398722,67398183	67401793,67401232,67400919,67399665,67399163,67398856,67398645	Gene ID= ENSG00000172531.14 TPM= 25.49 Transcript Type= protein_coding
chr11	67398201	67401931	67398201	67401931	-	ENST00000376745.8@PPP1CA	ENST00000376745.8	protein_coding	67401728,67401068,67400689,67399561,67398940,67398722,67398201	67401931,67401199,67400919,67399665,67399163,67398856,67398645	Gene ID= ENSG00000172531.14 TPM= 195.44 Transcript Type= protein_coding
chr11	67398201	67401604	67398201	67401604	-	ENST00000526510.5@PPP1CA	ENST00000526510.5	protein_coding	67401068,67400689,67399561,67398940,67398722,67398201	67401604,67400919,67399665,67399163,67398856,67398645	Gene ID= ENSG00000172531.14 TPM= 8.5 Transcript Type= retained_intron
chr11	67398201	67401577	67398201	67401577	-	ENST00000532446.5@PPP1CA	ENST00000532446.5	protein_coding	67401385,67401068,67400689,67399561,67398940,67398722,67398201	67401577,67401199,67400919,67399665,67399163,67398856,67398645	Gene ID= ENSG00000172531.14 TPM= 4.25 Transcript Type= processed_transcript
chr11	67415676	67425605	67415676	67425605	+	transcript3802.chr11.nic@CARNS1	transcript3802.chr11.nic	protein_coding	67415676,67416176,67417407,67418431,67418756,67419487,67419753,67420609,67420939,67423375	67415763,67416202,67417677,67418520,67419243,67419661,67419838,67420840,67421219,67425605	Gene ID= ENSG00000172508.10 TPM= 20.18 Transcript Type= NA
chr11	67416086	67425605	67416086	67425605	+	ENST00000445895.2@CARNS1	ENST00000445895.2	protein_coding	67416086,67417407,67418431,67418756,67419487,67419753,67420609,67420939,67423375	67416202,67417677,67418520,67419243,67419661,67419838,67420840,67421219,67425605	Gene ID= ENSG00000172508.10 TPM= 15.93 Transcript Type= protein_coding
chr11	67418622	67425607	67418622	67425607	+	transcript3811.chr11.nnic@CARNS1	transcript3811.chr11.nnic	protein_coding	67418622,67419487,67419753,67420609,67420939,67422229	67419243,67419661,67419838,67420840,67421219,67425607	Gene ID= ENSG00000172508.10 TPM= 14.87 Transcript Type= NA
chr11	67428456	67435408	67428456	67435408	+	transcript3818.chr11.nic@RPS6KB2	transcript3818.chr11.nic	protein_coding	67428456,67428982,67429120,67429527,67431368,67432600,67432737,67432952,67433126,67433340,67433995,67434198,67434377,67434582,67434989	67428623,67429022,67429240,67429595,67431515,67432657,67432837,67433042,67433194,67433447,67434057,67434275,67434484,67434694,67435408	Gene ID= ENSG00000175634.14 TPM= 2.12 Transcript Type= NA
chr11	67428456	67435408	67428456	67435408	+	transcript3821.chr11.nnic@RPS6KB2	transcript3821.chr11.nnic	protein_coding	67428456,67428982,67429120,67429527,67431368,67432600,67432737,67432952,67433340,67433995,67434198,67434377,67434582,67434989	67428623,67429022,67429240,67429595,67431515,67432657,67432837,67433042,67433447,67434057,67434275,67434484,67434694,67435408	Gene ID= ENSG00000175634.14 TPM= 2.12 Transcript Type= NA
chr11	67431030	67435088	67431030	67435088	+	transcript3830.chr11.nnic@RPS6KB2	transcript3830.chr11.nnic	protein_coding	67431030,67432737,67432952,67433340,67433995,67434198,67434377,67434582,67434989	67432657,67432837,67433042,67433447,67434057,67434275,67434484,67434694,67435088	Gene ID= ENSG00000175634.14 TPM= 11.68 Transcript Type= NA
chr11	67428501	67435408	67428501	67435408	+	ENST00000312629.9@RPS6KB2	ENST00000312629.9	protein_coding	67428501,67428982,67429120,67429527,67431368,67432600,67432737,67432952,67433126,67433340,67433995,67434198,67434377,67434582,67434989	67428623,67429022,67429240,67429595,67431515,67432657,67432837,67433042,67433216,67433447,67434057,67434275,67434484,67434694,67435408	Gene ID= ENSG00000175634.14 TPM= 38.24 Transcript Type= protein_coding
chr11	67438076	67443512	67438076	67443512	-	ENST00000341356.9@CORO1B	ENST00000341356.9	protein_coding	67443404,67442428,67441966,67441733,67441333,67441125,67440335,67440118,67439786,67438671,67438076	67443512,67442630,67442088,67441862,67441514,67441244,67440439,67440263,67439843,67438949,67438501	Gene ID= ENSG00000172725.13 TPM= 5.31 Transcript Type= protein_coding
chr11	67453019	67454820	67453019	67454820	-	transcript3843.chr11.nnic@NA	transcript3843.chr11.nnic	NA	67453019	67454820	Gene ID= novel_gene_chr11_3844 TPM= 2.12 Transcript Type= NA
chr11	67464392	67469250	67464392	67469250	-	ENST00000393877.3@TMEM134	ENST00000393877.3	protein_coding	67469019,67468028,67467501,67467312,67464803,67464392	67469250,67468092,67467590,67467388,67464856,67464696	Gene ID= ENSG00000172663.8 TPM= 16.99 Transcript Type= protein_coding
chr11	67464353	67469239	67464353	67469239	-	ENST00000545682.5@TMEM134	ENST00000545682.5	protein_coding	67469019,67468028,67467501,67467312,67465056,67464803,67464353	67469239,67468092,67467590,67467388,67465267,67464856,67464696	Gene ID= ENSG00000172663.8 TPM= 7.16 Transcript Type= nonsense_mediated_decay
chr11	67483041	67491103	67483041	67491103	+	ENST00000279146.7@AIP	ENST00000279146.7	protein_coding	67483041,67487006,67489267,67490038,67490316,67490788	67483257,67487185,67489455,67490214,67490457,67491103	Gene ID= ENSG00000110711.9 TPM= 106.22 Transcript Type= protein_coding
chr11	67491769	67505372	67491769	67505372	-	ENST00000356404.7@PITPNM1	ENST00000356404.7	protein_coding	67505188,67504103,67502504,67502292,67501862,67500095,67499914,67499723,67498940,67498596,67498133,67497917,67497522,67497231,67496178,67495438,67495077,67494846,67494244,67493922,67493688,67493410,67492934,67491769	67505372,67504221,67502718,67502413,67502086,67500421,67500009,67499830,67499001,67498846,67498322,67498024,67497679,67497436,67496348,67495602,67495225,67494956,67494360,67494070,67493837,67493593,67493062,67492296	Gene ID= ENSG00000110697.12 TPM= 110.46 Transcript Type= protein_coding
chr11	67506497	67508631	67506497	67508631	-	ENST00000301488.7@CDK2AP2	ENST00000301488.7	protein_coding	67508001,67507592,67507365,67506497	67508631,67507689,67507497,67507012	Gene ID= ENSG00000167797.7 TPM= 139.67 Transcript Type= protein_coding
chr11	67506512	67508649	67506512	67508649	-	ENST00000525402.5@CDK2AP2	ENST00000525402.5	protein_coding	67507592,67507365,67506512	67508649,67507497,67507012	Gene ID= ENSG00000167797.7 TPM= 6.37 Transcript Type= retained_intron
chr11	67583595	67586660	67583595	67586660	+	ENST00000398606.7@GSTP1	ENST00000398606.7	protein_coding	67583595,67584134,67584464,67584685,67585138,67586104,67586389	67583844,67584169,67584570,67584772,67585241,67586211,67586660	Gene ID= ENSG00000084207.15 TPM= 297.94 Transcript Type= protein_coding
chr11	67606852	67612506	67606852	67612506	+	ENST00000322776.10@NDUFV1	ENST00000322776.10	protein_coding	67606852,67608396,67608552,67609452,67610381,67610995,67611403,67611897,67612120,67612372	67607076,67608478,67608722,67609635,67610570,67611207,67611569,67611978,67612265,67612506	Gene ID= ENSG00000167792.11 TPM= 681.91 Transcript Type= protein_coding
chr11	67612651	67615198	67612651	67615198	-	ENST00000639052.1@DOC2GP	ENST00000639052.1	transcribed_unitary_pseudogene	67612651	67615198	Gene ID= ENSG00000231793.5 TPM= 1.06 Transcript Type= retained_intron
chr11	67627939	67629921	67627939	67629921	-	ENST00000376693.2@NUDT8	ENST00000376693.2	protein_coding	67629718,67628919,67628323,67627939	67629921,67629051,67628400,67628251	Gene ID= ENSG00000167799.9 TPM= 28.68 Transcript Type= protein_coding
chr11	67627938	67629930	67627938	67629930	-	ENST00000301490.8@NUDT8	ENST00000301490.8	protein_coding	67629718,67628919,67627938	67629930,67629051,67628400	Gene ID= ENSG00000167799.9 TPM= 2.12 Transcript Type= protein_coding
chr11	67791767	67805334	67791767	67805334	-	ENST00000529253.5@FAM86C2P	ENST00000529253.5	transcribed_unprocessed_pseudogene	67805218,67803002,67796684,67791767	67805334,67803064,67796833,67793293	Gene ID= ENSG00000160172.10 TPM= 3.19 Transcript Type= processed_transcript
chr11	67991104	68004123	67991104	68004123	-	ENST00000227471.6@UNC93B1	ENST00000227471.6	protein_coding	68003948,68003657,68003022,67999519,67999173,67998359,67997675,67996602,67995611,67993676,67991104	68004123,68003798,68003175,67999680,67999305,67998452,67997799,67996784,67995884,67993794,67991857	Gene ID= ENSG00000110057.7 TPM= 14.87 Transcript Type= protein_coding
chr11	68010352	68029276	68010352	68029276	+	ENST00000342456.10@ALDH3B1	ENST00000342456.10	protein_coding	68010352,68015297,68018527,68018773,68019170,68019715,68021485,68022595,68026009,68027749	68010392,68015459,68018637,68018893,68019255,68019796,68021871,68022761,68026108,68029276	Gene ID= ENSG00000006534.15 TPM= 4.25 Transcript Type= protein_coding
chr11	68024809	68030461	68024809	68030461	-	ENST00000532296.1@AC004923.4	ENST00000532296.1	antisense_RNA	68030259,68029284,68025187,68024809	68030461,68029420,68025332,68025061	Gene ID= ENSG00000255306.1 TPM= 1.06 Transcript Type= antisense_RNA
chr11	68030723	68036644	68030723	68036644	+	transcript3930.chr11.nic@NDUFS8	transcript3930.chr11.nic	protein_coding	68030723,68032152,68032286,68032923,68033111,68036253,68036462	68030961,68032209,68032336,68033012,68033283,68036381,68036644	Gene ID= ENSG00000110717.12 TPM= 19.28 Transcript Type= NA
chr11	68030627	68036644	68030627	68036644	+	ENST00000313468.9@NDUFS8	ENST00000313468.9	protein_coding	68030627,68032152,68032286,68032923,68033111,68036253,68036462	68030733,68032209,68032336,68033012,68033283,68036381,68036644	Gene ID= ENSG00000110717.12 TPM= 435.11 Transcript Type= protein_coding
chr11	68030688	68036639	68030688	68036639	+	ENST00000528492.1@NDUFS8	ENST00000528492.1	protein_coding	68030688,68036253,68036462	68030733,68036381,68036639	Gene ID= ENSG00000110717.12 TPM= 18.48 Transcript Type= protein_coding
chr11	68039004	68050895	68039004	68050895	+	transcript3945.chr11.nnic@TCIRG1	transcript3945.chr11.nnic	protein_coding	68039004,68041268,68041753,68042643,68042946,68043571,68043798,68044132,68044958,68047433,68047647,68047882,68048879,68049081,68049663,68049962,68050137,68050487,68050741	68039119,68041388,68041831,68042863,68043497,68043653,68043907,68044344,68045102,68047572,68047804,68047972,68048997,68049294,68049788,68050066,68050254,68050664,68050895	Gene ID= ENSG00000110719.9 TPM= 8.5 Transcript Type= NA
chr11	68039004	68050895	68039004	68050895	+	transcript3950.chr11.nic@TCIRG1	transcript3950.chr11.nic	protein_coding	68039004,68041268,68041753,68042643,68042946,68043571,68043814,68044132,68044958,68047433,68047647,68047882,68048879,68049081,68049962,68050137,68050487,68050741	68039119,68041388,68041831,68042863,68043497,68043653,68043907,68044344,68045102,68047572,68047804,68047972,68048997,68049788,68050066,68050254,68050664,68050895	Gene ID= ENSG00000110719.9 TPM= 12.21 Transcript Type= NA
chr11	68039016	68050895	68039016	68050895	+	ENST00000265686.7@TCIRG1	ENST00000265686.7	protein_coding	68039016,68041268,68041753,68042643,68042946,68043371,68043571,68043814,68044132,68044958,68047433,68047647,68047882,68048879,68049081,68049663,68049962,68050137,68050487,68050741	68039119,68041388,68041831,68042863,68043031,68043497,68043653,68043907,68044344,68045102,68047572,68047804,68047972,68048997,68049294,68049788,68050066,68050254,68050664,68050895	Gene ID= ENSG00000110719.9 TPM= 13.28 Transcript Type= protein_coding
chr11	68044289	68050868	68044289	68050868	+	ENST00000533005.5@TCIRG1	ENST00000533005.5	protein_coding	68044289,68044958,68047433,68047647,68048879,68049081,68049663,68049962,68050137,68050487,68050741	68044344,68045102,68047572,68047972,68048997,68049294,68049788,68050066,68050254,68050664,68050868	Gene ID= ENSG00000110719.9 TPM= 1.06 Transcript Type= retained_intron
chr11	68045558	68047638	68045558	68047638	-	transcript3962.chr11.nnic@NA	transcript3962.chr11.nnic	NA	68045558	68047638	Gene ID= novel_gene_chr11_3963 TPM= 12.75 Transcript Type= NA
chr11	68156935	68213658	68156935	68213658	-	transcript3969.chr11.nnic@KMT5B	transcript3969.chr11.nnic	protein_coding	68213477,68189917,68185781,68180132,68179470,68175018,68173804,68171543,68171232,68171015,68166982,68156935	68213658,68190152,68185928,68180200,68179830,68175183,68173913,68171709,68171251,68171151,68167178,68159171	Gene ID= ENSG00000110066.14 TPM= 2.34 Transcript Type= NA
chr11	68154863	68213415	68154863	68213415	-	ENST00000304363.8@KMT5B	ENST00000304363.8	protein_coding	68213138,68189917,68185781,68180132,68175018,68173804,68171543,68171232,68171015,68166982,68154863	68213415,68190152,68185928,68180200,68175183,68173913,68171709,68171251,68171151,68167178,68159171	Gene ID= ENSG00000110066.14 TPM= 1.06 Transcript Type= protein_coding
chr11	68156708	68213751	68156708	68213751	-	transcript3975.chr11.nic@KMT5B	transcript3975.chr11.nic	protein_coding	68213477,68189917,68185781,68180132,68175018,68173804,68171543,68171232,68171015,68166982,68156708	68213751,68190152,68185928,68180200,68175183,68173913,68171709,68171251,68171151,68167178,68159171	Gene ID= ENSG00000110066.14 TPM= 2.34 Transcript Type= NA
chr11	68165715	68213759	68165715	68213759	-	transcript3992.chr11.nic@KMT5B	transcript3992.chr11.nic	protein_coding	68213477,68185781,68180132,68175018,68173804,68171543,68171232,68171015,68165715	68213759,68185928,68180200,68175183,68173913,68171709,68171251,68171151,68167178	Gene ID= ENSG00000110066.14 TPM= 4.78 Transcript Type= NA
chr11	68165715	68213286	68165715	68213286	-	ENST00000401547.6@KMT5B	ENST00000401547.6	protein_coding	68213138,68189917,68185781,68180132,68175018,68173804,68171543,68171232,68171015,68165715	68213286,68190152,68185928,68180200,68175183,68173913,68171709,68171251,68171151,68167178	Gene ID= ENSG00000110066.14 TPM= 9.03 Transcript Type= protein_coding
chr11	68165719	68213595	68165719	68213595	-	ENST00000402789.5@KMT5B	ENST00000402789.5	protein_coding	68213477,68189917,68185781,68180132,68175018,68173804,68171543,68171232,68171015,68166982,68165719	68213595,68190152,68185928,68180200,68175183,68173913,68171709,68171251,68171151,68167178,68165948	Gene ID= ENSG00000110066.14 TPM= 5.31 Transcript Type= protein_coding
chr11	68201020	68201937	68201020	68201937	+	transcript3995.chr11.nnic@NA	transcript3995.chr11.nnic	NA	68201020	68201937	Gene ID= novel_gene_chr11_3996 TPM= 3.19 Transcript Type= NA
chr11	68261338	68271935	68261338	68271935	-	transcript3997.chr11.nnic@C11orf24	transcript3997.chr11.nnic	protein_coding	68271857,68268054,68263692,68261851,68261338	68271935,68268251,68263866,68262918,68261725	Gene ID= ENSG00000171067.10 TPM= 2.12 Transcript Type= NA
chr11	68261338	68271995	68261338	68271995	-	transcript3998.chr11.nic@C11orf24	transcript3998.chr11.nic	protein_coding	68271857,68268054,68263692,68262731,68261338	68271995,68268251,68263866,68262918,68261725	Gene ID= ENSG00000171067.10 TPM= 2.12 Transcript Type= NA
chr11	68261335	68271962	68261335	68271962	-	ENST00000304271.10@C11orf24	ENST00000304271.10	protein_coding	68271857,68268054,68263692,68261335	68271962,68268251,68263866,68262918	Gene ID= ENSG00000171067.10 TPM= 23.37 Transcript Type= protein_coding
chr11	68267101	68271971	68267101	68271971	-	ENST00000529590.5@C11orf24	ENST00000529590.5	protein_coding	68271857,68268054,68267101	68271971,68268251,68267397	Gene ID= ENSG00000171067.10 TPM= 2.12 Transcript Type= processed_transcript
chr11	68312505	68375423	68312505	68375423	+	transcript4011.chr11.nnic@LRP5	transcript4011.chr11.nnic	protein_coding	68312505,68347847,68357650,68363747,68365571,68375231	68312805,68348243,68357847,68363943,68365702,68375423	Gene ID= ENSG00000162337.11 TPM= 7.44 Transcript Type= NA
chr11	68342072	68344677	68342072	68344677	-	transcript4017.chr11.nnic@NA	transcript4017.chr11.nnic	NA	68342072	68344677	Gene ID= novel_gene_chr11_4018 TPM= 4.25 Transcript Type= NA
chr11	68349029	68351034	68349029	68351034	-	transcript4019.chr11.nnic@NA	transcript4019.chr11.nnic	NA	68349029	68351034	Gene ID= novel_gene_chr11_4020 TPM= 4.25 Transcript Type= NA
chr11	68376173	68378569	68376173	68378569	-	transcript4015.chr11.nnic@NA	transcript4015.chr11.nnic	NA	68376173	68378569	Gene ID= novel_gene_chr11_4016 TPM= 29.74 Transcript Type= NA
chr11	68586276	68614592	68586276	68614592	+	ENST00000526307.5@PPP6R3	ENST00000526307.5	protein_coding	68586276,68590660,68591576,68596097,68600341,68601863,68603342,68609611,68609904,68613066	68588024,68590714,68591706,68596218,68600494,68601969,68603492,68609628,68610023,68614592	Gene ID= ENSG00000110075.14 TPM= 1.77 Transcript Type= retained_intron
chr11	68460755	68614575	68460755	68614575	+	ENST00000524904.5@PPP6R3	ENST00000524904.5	protein_coding	68460755,68519501,68537659,68544838,68548067,68551121,68554145,68558566,68564303,68567014,68569748,68571040,68574109,68575958,68583043,68587945,68590660,68591576,68596097,68600341,68601863,68603342,68609904,68613066	68460827,68519651,68537891,68545024,68548204,68551186,68554257,68558679,68564432,68567166,68569897,68571104,68574224,68576043,68583129,68588024,68590714,68591706,68596218,68600494,68601969,68603492,68610023,68614575	Gene ID= ENSG00000110075.14 TPM= 10.8 Transcript Type= protein_coding
chr11	68460731	68615334	68460731	68615334	+	ENST00000393800.6@PPP6R3	ENST00000393800.6	protein_coding	68460731,68519501,68537659,68544838,68548067,68551121,68554145,68558566,68564303,68567014,68569748,68571040,68574109,68575958,68583043,68587927,68590660,68591576,68596097,68600341,68601863,68603342,68609904,68613066	68460827,68519651,68537891,68545024,68548204,68551186,68554257,68558679,68564432,68567166,68569897,68571104,68574224,68576043,68583129,68588024,68590714,68591706,68596218,68600494,68601969,68603492,68610023,68615334	Gene ID= ENSG00000110075.14 TPM= 17.18 Transcript Type= protein_coding
chr11	68510056	68511355	68510056	68511355	-	transcript4043.chr11.nnic@NA	transcript4043.chr11.nnic	NA	68510056	68511355	Gene ID= novel_gene_chr11_4044 TPM= 9.56 Transcript Type= NA
chr11	68542391	68550332	68542391	68550332	-	transcript4041.chr11.nnic@NA	transcript4041.chr11.nnic	NA	68542391	68550332	Gene ID= novel_gene_chr11_4042 TPM= 22.31 Transcript Type= NA
chr11	68561090	68562043	68561090	68562043	+	transcript4037.chr11.nnic@NA	transcript4037.chr11.nnic	NA	68561090	68562043	Gene ID= novel_gene_chr11_4038 TPM= 2.12 Transcript Type= NA
chr11	68562647	68565502	68562647	68565502	+	transcript4035.chr11.nnic@NA	transcript4035.chr11.nnic	NA	68562647	68565502	Gene ID= novel_gene_chr11_4036 TPM= 2.12 Transcript Type= NA
chr11	68580748	68586427	68580748	68586427	-	transcript4047.chr11.nnic@NA	transcript4047.chr11.nnic	NA	68580748	68586427	Gene ID= novel_gene_chr11_4048 TPM= 39.3 Transcript Type= NA
chr11	68581052	68582389	68581052	68582389	+	transcript4039.chr11.nnic@NA	transcript4039.chr11.nnic	NA	68581052	68582389	Gene ID= novel_gene_chr11_4040 TPM= 2.12 Transcript Type= NA
chr11	68754622	68841931	68754622	68841931	-	ENST00000376618.6@CPT1A	ENST00000376618.6	protein_coding	68841775,68815334,68812437,68807467,68804000,68799218,68796856,68794804,68793315,68784815,68781771,68780640,68775316,68773265,68762627,68761535,68760225,68759569,68754622	68841931,68815487,68812576,68807638,68804101,68799355,68796933,68794911,68793402,68785010,68781959,68780745,68775432,68773429,68762761,68761687,68760338,68759661,68754851	Gene ID= ENSG00000110090.12 TPM= 1.06 Transcript Type= protein_coding
chr11	68891276	68903820	68891276	68903820	-	ENST00000362034.6@MRPL21	ENST00000362034.6	protein_coding	68903723,68900548,68897927,68896515,68893403,68892890,68891276	68903820,68900605,68898012,68896678,68893455,68892993,68891395	Gene ID= ENSG00000197345.12 TPM= 99.84 Transcript Type= protein_coding
chr11	68891283	68903827	68891283	68903827	-	ENST00000541279.1@MRPL21	ENST00000541279.1	protein_coding	68903723,68900548,68897927,68896515,68893322,68892890,68891283	68903827,68900605,68898012,68896678,68893455,68892993,68891395	Gene ID= ENSG00000197345.12 TPM= 2.12 Transcript Type= nonsense_mediated_decay
chr11	68903842	68940599	68903842	68940599	+	ENST00000255078.7@IGHMBP2	ENST00000255078.7	protein_coding	68903842,68906069,68908145,68908534,68911440,68914823,68917736,68929183,68933299,68933795,68934464,68935299,68936237,68938182,68939534	68904038,68906238,68908337,68908631,68911603,68915023,68917883,68929357,68933481,68933913,68934558,68935422,68937091,68938354,68940599	Gene ID= ENSG00000132740.8 TPM= 9.56 Transcript Type= protein_coding
chr11	68903855	68913068	68903855	68913068	+	transcript4072.chr11.nic@IGHMBP2	transcript4072.chr11.nic	protein_coding	68903855,68906069,68908145,68908534,68911440	68904038,68906238,68908337,68908631,68913068	Gene ID= ENSG00000132740.8 TPM= 3.19 Transcript Type= NA
chr11	69004398	69013409	69004398	69013409	-	ENST00000309099.6@MRGPRF	ENST00000309099.6	protein_coding	69013083,69009854,69004398	69013409,69009957,69006261	Gene ID= ENSG00000172935.8 TPM= 3.19 Transcript Type= protein_coding
chr11	69048897	69088524	69048897	69088524	+	ENST00000294309.7@TPCN2	ENST00000294309.7	protein_coding	69048897,69054033,69054721,69055175,69057578,69062884,69063895,69067503,69070430,69071356,69071923,69072627,69072915,69078482,69078734,69078892,69079834,69081400,69083945,69085210,69085671,69085848,69086523,69087112,69087875	69049106,69054097,69054797,69055352,69057694,69062990,69063967,69067605,69070495,69071420,69072023,69072708,69073001,69078601,69078793,69079020,69079883,69081499,69084016,69085286,69085752,69085930,69086604,69087206,69088524	Gene ID= ENSG00000162341.16 TPM= 8.5 Transcript Type= protein_coding
chr11	69641087	69654474	69641087	69654474	+	ENST00000227507.2@CCND1	ENST00000227507.2	protein_coding	69641087,69643031,69643832,69647994,69651118	69641511,69643246,69643991,69648142,69654474	Gene ID= ENSG00000110092.3 TPM= 211.93 Transcript Type= protein_coding
chr11	69665563	69675347	69665563	69675347	-	ENST00000279147.8@ORAOV1	ENST00000279147.8	protein_coding	69675190,69673216,69671749,69667895,69665563	69675347,69673321,69671819,69668012,69667587	Gene ID= ENSG00000149716.12 TPM= 6.37 Transcript Type= protein_coding
chr11	70203187	70207390	70203187	70207390	+	transcript4118.chr11.nnic@FADD	transcript4118.chr11.nnic	protein_coding	70203187,70206133,70207069	70203745,70206757,70207390	Gene ID= ENSG00000168040.4 TPM= 2.66 Transcript Type= NA
chr11	70203163	70207390	70203163	70207390	+	ENST00000301838.4@FADD	ENST00000301838.4	protein_coding	70203163,70206133	70203745,70207390	Gene ID= ENSG00000168040.4 TPM= 37.71 Transcript Type= protein_coding
chr11	70270670	70384396	70270670	70384396	+	transcript4125.chr11.nic@PPFIA1	transcript4125.chr11.nic	protein_coding	70270670,70272173,70324402,70324847,70325500,70326262,70326597,70330173,70331960,70333470,70335563,70337365,70338374,70339171,70343669,70348189,70354301,70355639,70356161,70362095,70362288,70372215,70372477,70374918,70376532,70378030,70383003	70270914,70272436,70324503,70325011,70325574,70326363,70326818,70330319,70332094,70333553,70335694,70337427,70338453,70339306,70343892,70348420,70354452,70355811,70356254,70362176,70362488,70372390,70372574,70375093,70376600,70378195,70384396	Gene ID= ENSG00000131626.16 TPM= 7.97 Transcript Type= NA
chr11	70270670	70372534	70270670	70372534	+	transcript4126.chr11.nic@PPFIA1	transcript4126.chr11.nic	protein_coding	70270670,70272173,70324402,70324847,70325500,70326262,70326597,70330173,70331960,70333022,70333470,70335563,70337365,70338374,70339171,70343669,70348189,70354301,70355639,70356161,70362095,70362288,70372215,70372477	70270914,70272436,70324503,70325011,70325574,70326363,70326818,70330319,70332094,70333096,70333553,70335694,70337427,70338453,70339306,70343892,70348420,70354452,70355811,70356254,70362176,70362488,70372390,70372534	Gene ID= ENSG00000131626.16 TPM= 3.72 Transcript Type= NA
chr11	70270670	70349157	70270670	70349157	+	transcript4130.chr11.nic@PPFIA1	transcript4130.chr11.nic	protein_coding	70270670,70272173,70324402,70324847,70325500,70326262,70326597,70330173,70331960,70333022,70333470,70335563,70337365,70338374,70339171,70343669,70348189	70270914,70272436,70324503,70325011,70325574,70326363,70326818,70330319,70332094,70333096,70333553,70335694,70337427,70338453,70339306,70343892,70349157	Gene ID= ENSG00000131626.16 TPM= 5.31 Transcript Type= NA
chr11	70270700	70384400	70270700	70384400	+	ENST00000253925.11@PPFIA1	ENST00000253925.11	protein_coding	70270700,70272173,70324402,70324847,70325500,70326262,70326597,70330173,70331960,70333470,70335563,70337365,70338374,70339171,70343669,70348189,70354301,70355639,70356161,70362095,70362288,70372215,70372477,70374918,70376532,70378030,70382088,70383003	70270914,70272436,70324503,70325011,70325574,70326363,70326818,70330319,70332094,70333553,70335694,70337427,70338453,70339306,70343892,70348420,70354452,70355811,70356254,70362176,70362488,70372390,70372574,70375093,70376600,70378195,70382158,70384400	Gene ID= ENSG00000131626.16 TPM= 2.12 Transcript Type= protein_coding
chr11	70278210	70280131	70278210	70280131	-	transcript4146.chr11.nnic@NA	transcript4146.chr11.nnic	NA	70278210	70280131	Gene ID= novel_gene_chr11_4147 TPM= 2.12 Transcript Type= NA
chr11	70398506	70436575	70398506	70436575	+	ENST00000301843.12@CTTN	ENST00000301843.12	protein_coding	70398506,70405265,70407298,70407518,70409831,70414542,70415663,70417013,70419746,70420400,70421470,70422940,70425332,70429051,70431191,70433101,70433647,70435026	70398614,70405361,70407384,70407591,70409960,70414652,70415717,70417123,70419856,70420510,70421580,70422995,70425401,70429199,70431280,70433278,70433718,70436575	Gene ID= ENSG00000085733.15 TPM= 97.9 Transcript Type= protein_coding
chr11	70398404	70436584	70398404	70436584	+	ENST00000346329.7@CTTN	ENST00000346329.7	protein_coding	70398404,70405265,70407298,70407518,70409831,70414542,70415663,70417013,70419746,70420400,70422940,70425332,70429051,70431191,70433101,70433647,70435026	70398614,70405361,70407384,70407591,70409960,70414652,70415717,70417123,70419856,70420510,70422995,70425401,70429199,70431280,70433278,70433718,70436584	Gene ID= ENSG00000085733.15 TPM= 103.21 Transcript Type= protein_coding
chr11	70435426	70437896	70435426	70437896	-	transcript4162.chr11.nnic@NA	transcript4162.chr11.nnic	NA	70435426	70437896	Gene ID= novel_gene_chr11_4163 TPM= 11.33 Transcript Type= NA
chr11	71434414	71448435	71434414	71448435	-	ENST00000355527.7@DHCR7	ENST00000355527.7	protein_coding	71448290,71447610,71444855,71443993,71442263,71441227,71438879,71437812,71434414	71448435,71447734,71444958,71444215,71442353,71441440,71439083,71437943,71435839	Gene ID= ENSG00000172893.15 TPM= 35.05 Transcript Type= protein_coding
chr11	71434414	71441446	71434414	71441446	-	transcript4168.chr11.nic@DHCR7	transcript4168.chr11.nic	protein_coding	71441227,71438879,71437812,71434414	71441446,71439083,71437943,71435839	Gene ID= ENSG00000172893.15 TPM= 6.37 Transcript Type= NA
chr11	71448652	71452155	71448652	71452155	+	transcript4180.chr11.nnic@NA	transcript4180.chr11.nnic	NA	71448652	71452155	Gene ID= novel_gene_chr11_4181 TPM= 2.12 Transcript Type= NA
chr11	71448674	71452157	71448674	71452157	+	ENST00000529369.1@AP002387.1	ENST00000529369.1	antisense_RNA	71448674,71451690	71448885,71452157	Gene ID= ENSG00000254682.1 TPM= 4.25 Transcript Type= antisense_RNA
chr11	71453109	71501816	71453109	71501816	+	ENST00000319023.6@NADSYN1	ENST00000319023.6	protein_coding	71453109,71455110,71458428,71463432,71464053,71472449,71473278,71473569,71474395,71478395,71480755,71481356,71481923,71482849,71484312,71485542,71490845,71491834,71497483,71498352,71501302	71453381,71455170,71458544,71463485,71464142,71472500,71473366,71473686,71474526,71478469,71480879,71481404,71482025,71483017,71484447,71485648,71490976,71491903,71497611,71498528,71501816	Gene ID= ENSG00000172890.11 TPM= 1.06 Transcript Type= protein_coding
chr11	71453183	71501541	71453183	71501541	+	transcript4173.chr11.nic@NADSYN1	transcript4173.chr11.nic	protein_coding	71453183,71455110,71458428,71463432,71464053,71472449,71473278,71473569,71474395,71478395,71480755,71481356,71481923,71482849,71484312,71485542,71490845,71491834,71497483,71498352,71501302	71453381,71455170,71458544,71463485,71464142,71472500,71473366,71473686,71474526,71480274,71480879,71481404,71482025,71483017,71484447,71485648,71490976,71491903,71497611,71498528,71501541	Gene ID= ENSG00000172890.11 TPM= 3.72 Transcript Type= NA
chr11	71453183	71460947	71453183	71460947	+	transcript4177.chr11.nnic@NADSYN1	transcript4177.chr11.nnic	protein_coding	71453183,71455110,71458428,71460722	71453381,71455170,71458544,71460947	Gene ID= ENSG00000172890.11 TPM= 2.12 Transcript Type= NA
chr11	71453231	71464508	71453231	71464508	+	ENST00000524949.5@NADSYN1	ENST00000524949.5	protein_coding	71453231,71455110,71458428,71463432,71464053	71453381,71455170,71458544,71463485,71464508	Gene ID= ENSG00000172890.11 TPM= 1.06 Transcript Type= retained_intron
chr11	71479294	71501539	71479294	71501539	+	ENST00000530055.5@NADSYN1	ENST00000530055.5	protein_coding	71479294,71480755,71481356,71481923,71482849,71484312,71485542,71490845,71491834,71497483,71498352,71501302	71480274,71480879,71481404,71482025,71483017,71484447,71485648,71490976,71491903,71497611,71498528,71501539	Gene ID= ENSG00000172890.11 TPM= 5.84 Transcript Type= protein_coding
chr11	71787510	71801234	71787510	71801234	+	ENST00000346333.10@FAM86C1	ENST00000346333.10	protein_coding	71787510,71789783,71796017,71799561	71787632,71789845,71796166,71801234	Gene ID= ENSG00000158483.15 TPM= 4.25 Transcript Type= protein_coding
chr11	71928701	71997595	71928701	71997595	+	ENST00000361756.7@RNF121	ENST00000361756.7	protein_coding	71928701,71957227,71960750,71982761,71987004,71990597,71994719,71995450,71996195	71929124,71957264,71960891,71982915,71987111,71990717,71994852,71995551,71997595	Gene ID= ENSG00000137522.17 TPM= 9.56 Transcript Type= protein_coding
chr11	72002864	72041122	72002864	72041122	-	transcript4195.chr11.nic@NUMA1	transcript4195.chr11.nic	protein_coding	72040959,72035902,72029205,72024274,72023065,72022339,72021204,72019494,72018823,72018396,72018183,72017687,72016408,72012895,72012401,72010786,72009268,72008967,72008688,72007189,72006035,72005233,72004640,72004225,72003887,72002864	72041122,72035975,72029290,72024353,72023147,72022419,72021291,72019617,72018980,72018513,72018300,72017827,72016530,72016260,72012442,72010854,72009387,72009185,72008845,72007435,72006263,72005369,72004816,72004341,72004099,72003538	Gene ID= ENSG00000137497.17 TPM= 28.15 Transcript Type= NA
chr11	72002864	72041979	72002864	72041979	-	transcript4197.chr11.nic@NUMA1	transcript4197.chr11.nic	protein_coding	72041823,72035902,72029205,72024274,72023065,72022339,72021204,72019494,72018823,72018396,72018183,72017687,72016408,72012895,72012401,72010786,72009268,72008967,72008688,72007189,72006035,72005233,72004640,72004225,72003887,72002864	72041979,72035975,72029290,72024353,72023147,72022419,72021291,72019617,72018980,72018513,72018300,72017827,72016530,72016260,72012442,72010854,72009387,72009185,72008845,72007435,72006263,72005369,72004816,72004341,72004099,72003538	Gene ID= ENSG00000137497.17 TPM= 27.09 Transcript Type= NA
chr11	72002864	72041122	72002864	72041122	-	transcript4198.chr11.nic@NUMA1	transcript4198.chr11.nic	protein_coding	72040959,72035902,72029205,72024274,72023065,72022339,72021204,72019494,72018823,72018396,72018183,72017687,72016408,72012895,72010786,72009268,72008967,72008688,72007189,72006035,72005233,72004640,72004225,72003887,72002864	72041122,72035975,72029290,72024353,72023147,72022419,72021291,72019617,72018980,72018513,72018300,72017827,72016530,72016260,72010854,72009387,72009185,72008845,72007435,72006263,72005369,72004816,72004341,72004099,72003538	Gene ID= ENSG00000137497.17 TPM= 30.8 Transcript Type= NA
chr11	72022581	72028478	72022581	72028478	+	transcript4201.chr11.nnic@NA	transcript4201.chr11.nnic	NA	72022581,72025511	72024838,72028478	Gene ID= novel_gene_chr11_4202 TPM= 14.87 Transcript Type= NA
chr11	72080647	72096895	72080647	72096895	+	ENST00000289488.6@LRTOMT	ENST00000289488.6	protein_coding	72080647,72088297,72089029,72093496,72094948,72095379	72080885,72088380,72089165,72093701,72095096,72096895	Gene ID= ENSG00000184154.13 TPM= 2.12 Transcript Type= protein_coding
chr11	72097292	72103387	72097292	72103387	-	ENST00000278671.9@LAMTOR1	ENST00000278671.9	protein_coding	72103183,72099111,72098781,72098289,72097292	72103387,72099256,72098858,72098415,72097914	Gene ID= ENSG00000149357.9 TPM= 155.08 Transcript Type= protein_coding
chr11	72109587	72112780	72109587	72112780	-	transcript4210.chr11.nnic@ANAPC15	transcript4210.chr11.nnic	protein_coding	72112650,72111442,72111157,72110544,72110088,72109587	72112780,72111496,72111281,72110603,72110225,72109928	Gene ID= ENSG00000110200.8 TPM= 2.47 Transcript Type= NA
chr11	72109589	72112279	72109589	72112279	-	ENST00000542531.5@ANAPC15	ENST00000542531.5	protein_coding	72112216,72111412,72111157,72110544,72110088,72109589	72112279,72111496,72111281,72110603,72110225,72109928	Gene ID= ENSG00000110200.8 TPM= 1.94 Transcript Type= protein_coding
chr11	72109587	72112780	72109587	72112780	-	ENST00000227618.8@ANAPC15	ENST00000227618.8	protein_coding	72112650,72111412,72111157,72110544,72110088,72109587	72112780,72111496,72111286,72110603,72110225,72109928	Gene ID= ENSG00000110200.8 TPM= 67.27 Transcript Type= protein_coding
chr11	72109590	72112686	72109590	72112686	-	ENST00000545944.5@ANAPC15	ENST00000545944.5	protein_coding	72112650,72111157,72110544,72110088,72109590	72112686,72111286,72110603,72110225,72109928	Gene ID= ENSG00000110200.8 TPM= 1.41 Transcript Type= protein_coding
chr11	72109590	72112769	72109590	72112769	-	ENST00000538393.5@ANAPC15	ENST00000538393.5	protein_coding	72112650,72111412,72111157,72110544,72110088,72109590	72112769,72111496,72111281,72110603,72110225,72109928	Gene ID= ENSG00000110200.8 TPM= 20 Transcript Type= protein_coding
chr11	72109589	72112774	72109589	72112774	-	ENST00000535234.5@ANAPC15	ENST00000535234.5	protein_coding	72112650,72111442,72111157,72110544,72110088,72109589	72112774,72111496,72111286,72110603,72110225,72109928	Gene ID= ENSG00000110200.8 TPM= 4.6 Transcript Type= protein_coding
chr11	72216763	72221945	72216763	72221945	+	ENST00000298223.10@FOLR2	ENST00000298223.10	protein_coding	72216763,72218561,72220870,72221176,72221470	72216925,72218734,72221058,72221311,72221945	Gene ID= ENSG00000165457.13 TPM= 4.78 Transcript Type= protein_coding
chr11	72216781	72221950	72216781	72221950	+	ENST00000454954.6@FOLR2	ENST00000454954.6	protein_coding	72216781,72220870,72221176,72221470	72216925,72221058,72221311,72221950	Gene ID= ENSG00000165457.13 TPM= 1.59 Transcript Type= protein_coding
chr11	72223858	72239105	72223858	72239105	+	transcript4221.chr11.nic@INPPL1	transcript4221.chr11.nic	protein_coding	72223858,72224780,72228190,72228348,72228727,72229090,72229465,72229663,72229924,72230121,72230362,72230796,72230993,72231498,72232240,72232626,72232875,72233075,72233441,72233655,72234281,72234527,72235116,72235296,72235675,72235846,72237124,72238042,72238263	72223960,72225166,72228253,72228498,72228847,72229230,72229558,72229752,72230019,72230271,72230468,72230898,72231189,72231615,72232336,72232764,72232974,72233163,72233522,72233744,72234394,72234615,72235203,72235451,72235753,72235986,72237796,72238175,72239105	Gene ID= ENSG00000165458.13 TPM= 85.5 Transcript Type= NA
chr11	72226178	72230000	72226178	72230000	+	transcript4230.chr11.nnic@INPPL1	transcript4230.chr11.nnic	protein_coding	72226178,72228346,72229663	72228253,72229558,72230000	Gene ID= ENSG00000165458.13 TPM= 14.87 Transcript Type= NA
chr11	72292446	72434597	72292446	72434597	-	ENST00000538039.5@CLPB	ENST00000538039.5	protein_coding	72434072,72430312,72402966,72380281,72358880,72329707,72317106,72308527,72307199,72302304,72301803,72295492,72294620,72294325,72294022,72292446	72434597,72430363,72403052,72380384,72359008,72329804,72317220,72308604,72307254,72302348,72301964,72295648,72294693,72294444,72294126,72293615	Gene ID= ENSG00000162129.12 TPM= 29.74 Transcript Type= protein_coding
chr11	72576142	72642460	72576142	72642460	-	ENST00000444035.6@PDE2A	ENST00000444035.6	protein_coding	72642254,72631078,72608662,72605138,72597510,72596593,72591297,72590427,72590192,72589907,72589751,72589175,72588784,72586070,72585554,72585371,72584872,72584551,72584201,72583438,72582444,72581877,72581357,72580886,72580577,72579534,72579284,72578897,72578476,72578233,72576142	72642460,72631139,72608751,72605226,72597619,72596648,72591356,72590580,72590244,72589981,72589792,72589240,72588914,72586181,72585593,72585434,72584944,72584728,72584313,72583515,72582566,72581947,72581479,72580973,72580624,72579608,72579383,72579009,72578514,72578339,72577594	Gene ID= ENSG00000186642.15 TPM= 20.18 Transcript Type= protein_coding
chr11	72685069	72793599	72685069	72793599	-	ENST00000359373.9@ARAP1	ENST00000359373.9	protein_coding	72792875,72732515,72726620,72714152,72713176,72712438,72712196,72711430,72711021,72710385,72709870,72707175,72705805,72704152,72702905,72701649,72699417,72699005,72697911,72697598,72697323,72696983,72696549,72695718,72695542,72695387,72694980,72693692,72693325,72688455,72687688,72687439,72686042,72685069	72793599,72732597,72727172,72714321,72713243,72712568,72712339,72711499,72711141,72710587,72709976,72707374,72705890,72704334,72703079,72701783,72699552,72699107,72698106,72697649,72697486,72697195,72696654,72695865,72695628,72695455,72695097,72693805,72693470,72688537,72687738,72687502,72686191,72685681	Gene ID= ENSG00000186635.14 TPM= 16.46 Transcript Type= protein_coding
chr11	72685075	72726799	72685075	72726799	-	transcript4243.chr11.nic@ARAP1	transcript4243.chr11.nic	protein_coding	72726620,72714152,72713176,72712438,72712196,72711430,72711021,72710385,72709870,72707175,72705805,72702905,72701649,72699417,72699005,72697911,72697598,72697323,72696983,72696549,72695718,72695542,72695387,72694980,72693692,72693325,72688455,72687688,72687439,72686042,72685075	72726799,72714321,72713243,72712568,72712339,72711499,72711141,72710587,72709976,72707374,72705890,72703079,72701783,72699552,72699107,72698106,72697649,72697486,72697195,72696654,72695865,72695628,72695455,72695097,72693805,72693470,72688537,72687738,72687502,72686191,72685681	Gene ID= ENSG00000186635.14 TPM= 15.4 Transcript Type= NA
chr11	72754729	72781926	72754729	72781926	-	transcript4259.chr11.nic@STARD10	transcript4259.chr11.nic	protein_coding	72781664,72781113,72759234,72758530,72757767,72755701,72754729	72781926,72781294,72759381,72758633,72757884,72755753,72755142	Gene ID= ENSG00000214530.8 TPM= 23.37 Transcript Type= NA
chr11	72754729	72781926	72754729	72781926	-	transcript4260.chr11.nic@STARD10	transcript4260.chr11.nic	protein_coding	72781664,72780975,72759234,72758530,72755701,72754729	72781926,72781294,72759381,72758633,72755753,72755142	Gene ID= ENSG00000214530.8 TPM= 8.5 Transcript Type= NA
chr11	72814386	72829598	72814386	72829598	+	transcript4273.chr11.nic@ATG16L2	transcript4273.chr11.nic	protein_coding	72814386,72816728,72817756,72821199,72822044,72822478,72822848,72824060,72824734,72825302,72826173,72826518,72826703,72827188,72828359,72828729,72828883,72829303	72814563,72816827,72817855,72821741,72822295,72822543,72822961,72824122,72824842,72825407,72826243,72826589,72826823,72827293,72828508,72828776,72828984,72829598	Gene ID= ENSG00000168010.10 TPM= 3.19 Transcript Type= NA
chr11	72814308	72829635	72814308	72829635	+	ENST00000321297.9@ATG16L2	ENST00000321297.9	protein_coding	72814308,72816728,72817756,72821668,72822044,72822478,72822848,72824060,72824734,72825302,72826173,72826518,72826703,72827188,72828359,72828729,72828883,72829303	72814563,72816827,72817855,72821741,72822295,72822543,72822961,72824122,72824842,72825407,72826243,72826589,72826823,72827293,72828508,72828776,72828984,72829635	Gene ID= ENSG00000168010.10 TPM= 6.9 Transcript Type= protein_coding
chr11	72814386	72829598	72814386	72829598	+	transcript4282.chr11.nnic@ATG16L2	transcript4282.chr11.nnic	protein_coding	72814386,72816728,72817756,72821668,72822044,72822478,72822848,72824734,72825302,72826173,72826518,72826703,72827188,72828359,72828729,72828883,72829303	72814563,72816827,72817855,72821741,72822295,72822543,72824491,72824842,72825407,72826243,72826589,72826823,72827293,72828508,72828776,72828984,72829598	Gene ID= ENSG00000168010.10 TPM= 2.12 Transcript Type= NA
chr11	72814386	72829598	72814386	72829598	+	transcript4286.chr11.nic@ATG16L2	transcript4286.chr11.nic	protein_coding	72814386,72816728,72817756,72821668,72822044,72822478,72824734,72825302,72826173,72826518,72826703,72827188,72828359,72828729,72828883,72829303	72814563,72816827,72817855,72821741,72822295,72824122,72824842,72825407,72826243,72826589,72826823,72827293,72828508,72828776,72828984,72829598	Gene ID= ENSG00000168010.10 TPM= 3.19 Transcript Type= NA
chr11	72814419	72829635	72814419	72829635	+	ENST00000439504.6@ATG16L2	ENST00000439504.6	protein_coding	72814419,72816728,72817756,72821668,72822044,72822478,72822848,72825302,72826173,72826518,72826703,72827188,72828359,72828729,72828883,72829303	72814563,72816827,72817855,72821741,72822295,72822543,72824842,72825407,72826243,72826589,72826823,72827293,72828508,72828776,72828984,72829635	Gene ID= ENSG00000168010.10 TPM= 9.03 Transcript Type= retained_intron
chr11	72819753	72822636	72819753	72822636	-	transcript4305.chr11.nnic@NA	transcript4305.chr11.nnic	NA	72819753	72822636	Gene ID= novel_gene_chr11_4306 TPM= 2.12 Transcript Type= NA
chr11	73000432	73142393	73000432	73142393	-	transcript4299.chr11.nic@FCHSD2	transcript4299.chr11.nic	protein_coding	73141857,73140031,73083695,73015809,73000432	73142393,73140128,73083740,73015885,73001134	Gene ID= ENSG00000137478.14 TPM= 4.25 Transcript Type= NA
chr11	73218286	73235932	73218286	73235932	+	transcript4316.chr11.nnic@P2RY2	transcript4316.chr11.nnic	protein_coding	73218286,73227981,73234156	73218504,73228175,73235932	Gene ID= ENSG00000175591.11 TPM= 5.31 Transcript Type= NA
chr11	73218298	73235932	73218298	73235932	+	ENST00000393597.6@P2RY2	ENST00000393597.6	protein_coding	73218298,73227981,73234156	73218432,73228175,73235932	Gene ID= ENSG00000175591.11 TPM= 8.5 Transcript Type= protein_coding
chr11	73238975	73242335	73238975	73242335	+	ENST00000565433.1@AP002761.4	ENST00000565433.1	sense_overlapping	73238975	73242335	Gene ID= ENSG00000260401.1 TPM= 4.25 Transcript Type= sense_overlapping
chr11	73264517	73297805	73264517	73297805	+	ENST00000349767.6@P2RY6	ENST00000349767.6	protein_coding	73264517,73272307,73295730,73296485	73264649,73272466,73295815,73297805	Gene ID= ENSG00000171631.14 TPM= 2.66 Transcript Type= protein_coding
chr11	73271522	73297804	73271522	73297804	+	ENST00000540124.5@P2RY6	ENST00000540124.5	protein_coding	73271522,73295730,73296485	73272466,73295815,73297804	Gene ID= ENSG00000171631.14 TPM= 1.59 Transcript Type= protein_coding
chr11	73264539	73297802	73264539	73297802	+	ENST00000393592.6@P2RY6	ENST00000393592.6	protein_coding	73264539,73295730,73296485	73264649,73295815,73297802	Gene ID= ENSG00000171631.14 TPM= 3.19 Transcript Type= protein_coding
chr11	73307235	73309361	73307235	73309361	-	ENST00000546324.1@AP002761.3	ENST00000546324.1	antisense_RNA	73308672,73307882,73307235	73309361,73308564,73307556	Gene ID= ENSG00000257038.1 TPM= 1.06 Transcript Type= antisense_RNA
chr11	73308888	73354731	73308888	73354731	+	transcript4332.chr11.nic@ARHGEF17	transcript4332.chr11.nic	protein_coding	73308888,73346883,73352830	73311830,73346960,73354731	Gene ID= ENSG00000110237.3 TPM= 2.12 Transcript Type= NA
chr11	73308289	73369091	73308289	73369091	+	ENST00000263674.3@ARHGEF17	ENST00000263674.3	protein_coding	73308289,73346883,73352830,73355533,73355861,73356175,73356709,73357025,73357242,73359834,73360320,73361088,73362040,73362433,73363206,73363747,73364172,73364452,73365390,73365678,73367584	73311830,73346960,73353012,73355649,73355953,73356351,73356759,73357134,73357327,73359952,73360533,73361161,73362239,73362734,73363455,73363833,73364239,73364600,73365564,73365947,73369091	Gene ID= ENSG00000110237.3 TPM= 129.58 Transcript Type= protein_coding
chr11	73320005	73326732	73320005	73326732	+	transcript4335.chr11.nnic@NA	transcript4335.chr11.nnic	NA	73320005	73326732	Gene ID= novel_gene_chr11_4336 TPM= 3.19 Transcript Type= NA
chr11	73329375	73332281	73329375	73332281	-	transcript4341.chr11.nnic@NA	transcript4341.chr11.nnic	NA	73329375	73332281	Gene ID= novel_gene_chr11_4342 TPM= 4.25 Transcript Type= NA
chr11	73337336	73340204	73337336	73340204	-	transcript4343.chr11.nnic@NA	transcript4343.chr11.nnic	NA	73337336	73340204	Gene ID= novel_gene_chr11_4344 TPM= 4.25 Transcript Type= NA
chr11	73367615	73370783	73367615	73370783	+	transcript4339.chr11.nnic@NA	transcript4339.chr11.nnic	NA	73367615	73370783	Gene ID= novel_gene_chr11_4340 TPM= 2.12 Transcript Type= NA
chr11	73376264	73397472	73376264	73397472	+	ENST00000064780.6@RELT	ENST00000064780.6	protein_coding	73376264,73389112,73390551,73390755,73391144,73392211,73393837,73394236,73394477,73395087,73395444	73376499,73389181,73390625,73390921,73391223,73392468,73393917,73394317,73394734,73395285,73397472	Gene ID= ENSG00000054967.12 TPM= 3.19 Transcript Type= protein_coding
chr11	73400793	73405013	73400793	73405013	-	transcript4346.chr11.nnic@NA	transcript4346.chr11.nnic	NA	73400793	73405013	Gene ID= novel_gene_chr11_4347 TPM= 13.81 Transcript Type= NA
chr11	73647549	73662819	73647549	73662819	+	ENST00000227214.10@PLEKHB1	ENST00000227214.10	protein_coding	73647549,73649012,73650553,73651788,73652975,73660753,73661466	73647738,73649087,73650705,73651890,73653014,73660852,73662819	Gene ID= ENSG00000021300.13 TPM= 33.99 Transcript Type= protein_coding
chr11	73675638	73761137	73675638	73761137	-	ENST00000310653.10@RAB6A	ENST00000310653.10	protein_coding	73760566,73730765,73720846,73718785,73716251,73707420,73679654,73675638	73761137,73730823,73720899,73718890,73716362,73707513,73679720,73677962	Gene ID= ENSG00000175582.19 TPM= 13.28 Transcript Type= protein_coding
chr11	73675896	73761091	73675896	73761091	-	ENST00000336083.7@RAB6A	ENST00000336083.7	protein_coding	73760566,73730765,73720846,73718613,73716251,73707420,73679654,73675896	73761091,73730823,73720899,73718718,73716362,73707513,73679720,73677962	Gene ID= ENSG00000175582.19 TPM= 48.33 Transcript Type= protein_coding
chr11	73729464	73761017	73729464	73761017	-	ENST00000541795.1@RAB6A	ENST00000541795.1	protein_coding	73760566,73729464	73761017,73730823	Gene ID= ENSG00000175582.19 TPM= 1.06 Transcript Type= retained_intron
chr11	73787316	73864611	73787316	73864611	+	ENST00000310614.11@MRPL48	ENST00000310614.11	protein_coding	73787316,73805027,73808313,73825708,73844807,73859907,73863172,73864296	73787992,73805079,73808350,73825796,73844976,73860009,73863261,73864611	Gene ID= ENSG00000175581.13 TPM= 18.59 Transcript Type= protein_coding
chr11	73787906	73864605	73787906	73864605	+	ENST00000398483.7@MRPL48	ENST00000398483.7	protein_coding	73787906,73789335,73805027,73825708,73844807,73859907,73863172,73864296	73787992,73789490,73805079,73825796,73844976,73860009,73863261,73864605	Gene ID= ENSG00000175581.13 TPM= 3.72 Transcript Type= protein_coding
chr11	73870257	73872050	73870257	73872050	-	transcript4376.chr11.nnic@NA	transcript4376.chr11.nnic	NA	73870257	73872050	Gene ID= novel_gene_chr11_4377 TPM= 2.12 Transcript Type= NA
chr11	73872667	73876988	73872667	73876988	-	ENST00000355693.4@COA4	ENST00000355693.4	protein_coding	73876757,73872667	73876988,73873394	Gene ID= ENSG00000181924.6 TPM= 18.06 Transcript Type= protein_coding
chr11	73872669	73876674	73872669	73876674	-	ENST00000545127.1@COA4	ENST00000545127.1	protein_coding	73876479,73872669	73876674,73873394	Gene ID= ENSG00000181924.6 TPM= 2.12 Transcript Type= protein_coding
chr11	73876990	73927734	73876990	73927734	+	transcript4384.chr11.nnic@PAAF1	transcript4384.chr11.nnic	protein_coding	73876990,73878779,73886929,73887354,73889092,73891112,73899146,73900270,73909399,73914413,73916545,73918950,73924615,73927285	73877068,73878819,73887099,73887457,73889245,73891201,73899244,73900420,73909593,73914504,73916660,73919032,73924697,73927734	Gene ID= ENSG00000175575.12 TPM= 2.27 Transcript Type= NA
chr11	73876990	73927734	73876990	73927734	+	transcript4386.chr11.nnic@PAAF1	transcript4386.chr11.nnic	protein_coding	73876990,73878779,73887031,73887354,73888995,73891112,73899146,73900270,73909399,73914413,73916545,73918950,73924615,73927285	73877068,73878819,73887099,73887457,73889245,73891201,73899244,73900420,73909593,73914504,73916660,73919032,73924697,73927734	Gene ID= ENSG00000175575.12 TPM= 2.27 Transcript Type= NA
chr11	73876990	73927734	73876990	73927734	+	transcript4388.chr11.nnic@PAAF1	transcript4388.chr11.nnic	protein_coding	73876990,73878779,73887031,73887354,73889122,73891112,73899146,73900270,73909399,73914413,73916545,73918950,73924615,73927285	73877068,73878819,73887099,73887457,73889245,73891201,73899244,73900420,73909593,73914504,73916660,73919032,73924697,73927734	Gene ID= ENSG00000175575.12 TPM= 2.27 Transcript Type= NA
chr11	73876990	73927734	73876990	73927734	+	transcript4389.chr11.nnic@PAAF1	transcript4389.chr11.nnic	protein_coding	73876990,73878779,73887031,73887354,73889172,73891112,73899146,73900270,73909399,73914413,73916545,73918950,73924615,73927285	73877068,73878819,73887099,73887457,73889245,73891201,73899244,73900420,73909593,73914504,73916660,73919032,73924697,73927734	Gene ID= ENSG00000175575.12 TPM= 10.77 Transcript Type= NA
chr11	73876990	73927734	73876990	73927734	+	transcript4392.chr11.nic@PAAF1	transcript4392.chr11.nic	protein_coding	73876990,73878779,73886929,73887354,73891112,73899146,73900270,73909399,73914413,73916545,73918950,73924615,73927285	73877068,73878819,73887099,73887457,73891201,73899244,73900420,73909593,73914504,73916660,73919032,73924697,73927734	Gene ID= ENSG00000175575.12 TPM= 3.34 Transcript Type= NA
chr11	73876969	73931124	73876969	73931124	+	ENST00000310571.7@PAAF1	ENST00000310571.7	protein_coding	73876969,73878779,73887354,73891112,73899146,73900270,73909399,73914413,73916545,73918950,73924615,73927285	73877068,73878819,73887457,73891201,73899244,73900420,73909593,73914504,73916660,73919032,73924697,73931124	Gene ID= ENSG00000175575.12 TPM= 7.44 Transcript Type= protein_coding
chr11	73876974	73880703	73876974	73880703	+	ENST00000381783.4@PAAF1	ENST00000381783.4	protein_coding	73876974,73878779	73877068,73880703	Gene ID= ENSG00000175575.12 TPM= 1.06 Transcript Type= retained_intron
chr11	73877028	73927745	73877028	73927745	+	ENST00000544552.5@PAAF1	ENST00000544552.5	protein_coding	73877028,73878783,73887040,73887354,73891112,73899146,73900270,73909399,73914413,73916545,73918950,73924615,73927285	73877068,73878819,73887099,73887457,73891201,73899244,73900420,73909593,73914504,73916660,73919032,73924697,73927745	Gene ID= ENSG00000175575.12 TPM= 1.21 Transcript Type= protein_coding
chr11	73876997	73927728	73876997	73927728	+	ENST00000536003.5@PAAF1	ENST00000536003.5	protein_coding	73876997,73878779,73887031,73887354,73891112,73899146,73900270,73909399,73914413,73916545,73918950,73924615,73927285	73877068,73878819,73887099,73887457,73891201,73899244,73900420,73909593,73914504,73916660,73919032,73924697,73927728	Gene ID= ENSG00000175575.12 TPM= 4.25 Transcript Type= protein_coding
chr11	73974667	73983307	73974667	73983307	-	ENST00000310473.7@UCP2	ENST00000310473.7	protein_coding	73982721,73981476,73978253,73977886,73976823,73976641,73975491,73974667	73983307,73981632,73978477,73978096,73977017,73976742,73975671,73975121	Gene ID= ENSG00000175567.8 TPM= 6.37 Transcript Type= protein_coding
chr11	74012714	74171019	74012714	74171019	-	ENST00000334126.11@C2CD3	ENST00000334126.11	protein_coding	74170738,74168344,74161399,74139605,74138720,74133425,74132844,74122988,74118228,74114384,74113780,74109034,74106371,74103131,74100525,74098009,74095228,74093816,74092416,74090813,74085618,74084881,74078115,74074253,74057406,74054607,74049337,74048205,74042054,74037478,74033351,74028287,74012714	74171019,74168613,74161556,74139828,74138967,74133557,74132972,74123135,74118382,74114593,74113892,74109152,74106493,74103625,74100676,74098255,74095408,74093999,74092588,74090936,74085886,74084970,74078717,74074600,74057544,74054671,74049542,74048338,74042218,74037698,74034278,74028398,74013525	Gene ID= ENSG00000168014.16 TPM= 5.31 Transcript Type= protein_coding
chr11	74171099	74254703	74171099	74254703	+	ENST00000328257.12@PPME1	ENST00000328257.12	protein_coding	74171099,74203728,74204353,74222312,74225205,74230245,74230912,74235901,74239133,74246076,74247079,74250954,74251648,74253492	74171522,74203821,74204445,74222369,74225256,74230399,74231002,74235966,74239256,74246205,74247123,74251018,74251715,74254703	Gene ID= ENSG00000214517.9 TPM= 55.23 Transcript Type= protein_coding
chr11	74330318	74398473	74330318	74398473	-	ENST00000298198.4@PGM2L1	ENST00000298198.4	protein_coding	74398051,74374415,74371711,74370902,74368492,74351383,74347148,74346732,74345469,74343323,74342885,74342461,74338468,74330318	74398473,74374582,74371817,74370986,74368575,74351576,74347337,74346829,74345649,74343416,74343014,74342650,74338601,74336754	Gene ID= ENSG00000165434.7 TPM= 1.06 Transcript Type= protein_coding
chr11	74455090	74457881	74455090	74457881	-	transcript4418.chr11.nnic@NA	transcript4418.chr11.nnic	NA	74455090	74457881	Gene ID= novel_gene_chr11_4419 TPM= 2.12 Transcript Type= NA
chr11	74491843	74493733	74491843	74493733	-	ENST00000310109.4@LIPT2	ENST00000310109.4	protein_coding	74493238,74491843	74493733,74492364	Gene ID= ENSG00000175536.6 TPM= 2.12 Transcript Type= protein_coding
chr11	74493366	74498533	74493366	74498533	+	ENST00000526036.1@AP001372.2	ENST00000526036.1	bidirectional_promoter_lncRNA	74493366,74496649	74493973,74498533	Gene ID= ENSG00000254837.2 TPM= 6.37 Transcript Type= bidirectional_promoter_lncRNA
chr11	74592530	74643057	74592530	74643057	+	ENST00000263681.6@POLD3	ENST00000263681.6	protein_coding	74592530,74594061,74604692,74611499,74612878,74618537,74620017,74625408,74629217,74634583,74636197,74640564	74592718,74594116,74604794,74611538,74613010,74618804,74620089,74625573,74629323,74634695,74636275,74643057	Gene ID= ENSG00000077514.8 TPM= 2.12 Transcript Type= protein_coding
chr11	74595167	74596761	74595167	74596761	-	transcript4428.chr11.nnic@NA	transcript4428.chr11.nnic	NA	74595167	74596761	Gene ID= novel_gene_chr11_4429 TPM= 5.31 Transcript Type= NA
chr11	74696429	74731385	74696429	74731385	-	ENST00000376332.7@CHRDL2	ENST00000376332.7	protein_coding	74730807,74718720,74713386,74710849,74708302,74706487,74704486,74703305,74702794,74697205,74696429	74731385,74718832,74713479,74710991,74708395,74706542,74704654,74703499,74702967,74697297,74696585	Gene ID= ENSG00000054938.15 TPM= 4.25 Transcript Type= protein_coding
chr11	74748846	74810261	74748846	74810261	+	transcript4437.chr11.nic@RNF169	transcript4437.chr11.nic	protein_coding	74748846,74789626,74810184	74749382,74789699,74810261	Gene ID= ENSG00000166439.5 TPM= 2.12 Transcript Type= NA
chr11	74748868	74842413	74748868	74842413	+	ENST00000299563.4@RNF169	ENST00000299563.4	protein_coding	74748868,74789626,74810184,74817596,74834676,74835546	74749382,74789699,74810330,74817714,74834775,74842413	Gene ID= ENSG00000166439.5 TPM= 8.5 Transcript Type= protein_coding
chr11	74949247	74979031	74949247	74979031	+	ENST00000263672.10@SPCS2	ENST00000263672.10	protein_coding	74949247,74965034,74965763,74969565,74976857	74949399,74965117,74965923,74969699,74979031	Gene ID= ENSG00000118363.11 TPM= 28.68 Transcript Type= protein_coding
chr11	74988134	75010907	74988134	75010907	+	ENST00000294064.8@NEU3	ENST00000294064.8	protein_coding	74988134,74994509,75005413	74989154,74994720,75010907	Gene ID= ENSG00000162139.9 TPM= 7.44 Transcript Type= protein_coding
chr11	75150987	75206549	75150987	75206549	+	ENST00000289575.9@SLCO2B1	ENST00000289575.9	protein_coding	75150987,75162655,75163963,75165787,75169173,75169666,75172379,75188136,75193218,75196514,75200224,75202901,75203307,75204400	75151397,75162785,75164100,75165949,75169406,75169764,75172569,75188238,75193575,75196679,75200387,75202965,75203427,75206549	Gene ID= ENSG00000137491.14 TPM= 2.12 Transcript Type= protein_coding
chr11	75203381	75206254	75203381	75206254	+	ENST00000341411.5@SLCO2B1	ENST00000341411.5	protein_coding	75203381	75206254	Gene ID= ENSG00000137491.14 TPM= 2.12 Transcript Type= retained_intron
chr11	75265538	75306712	75265538	75306712	-	transcript4454.chr11.nic@ARRB1	transcript4454.chr11.nic	protein_coding	75306553,75290009,75287315,75284235,75283287,75281962,75281075,75278609,75277364,75276839,75274074,75272895,75268889,75267652,75265538	75306712,75290039,75287375,75284279,75283483,75282021,75281142,75278744,75277448,75276911,75274211,75272978,75268959,75267703,75266274	Gene ID= ENSG00000137486.16 TPM= 2.12 Transcript Type= NA
chr11	75399519	75405692	75399519	75405692	+	ENST00000530721.5@RPS3	ENST00000530721.5	protein_coding	75399519,75400694,75401640,75402352,75404020,75404672,75405614	75399577,75400777,75401733,75402446,75404207,75404868,75405692	Gene ID= ENSG00000149273.14 TPM= 19.65 Transcript Type= nonsense_mediated_decay
chr11	75399486	75406913	75399486	75406913	+	ENST00000531188.5@RPS3	ENST00000531188.5	protein_coding	75399486,75400694,75401640,75402352,75404020,75404672,75405614	75399577,75400824,75401733,75402446,75404207,75404868,75406913	Gene ID= ENSG00000149273.14 TPM= 412.12 Transcript Type= protein_coding
chr11	75399531	75422280	75399531	75422280	+	ENST00000527446.5@RPS3	ENST00000527446.5	protein_coding	75399531,75400694,75401640,75402352,75404020,75404672,75421727	75399577,75400824,75401733,75402446,75404207,75404868,75422280	Gene ID= ENSG00000149273.14 TPM= 10.62 Transcript Type= protein_coding
chr11	75399557	75405692	75399557	75405692	+	ENST00000526248.5@RPS3	ENST00000526248.5	protein_coding	75399557,75400694,75401640,75402352,75404054,75404672,75405614	75399577,75400824,75401733,75402446,75404207,75404868,75405692	Gene ID= ENSG00000149273.14 TPM= 7.97 Transcript Type= nonsense_mediated_decay
chr11	75422396	75430629	75422396	75430629	-	ENST00000539798.1@KLHL35	ENST00000539798.1	protein_coding	75429749,75428442,75426520,75425393,75423692,75422396	75430629,75428626,75426638,75425581,75423880,75422768	Gene ID= ENSG00000149243.15 TPM= 3.19 Transcript Type= protein_coding
chr11	75434640	75525903	75434640	75525903	-	ENST00000336898.7@GDPD5	ENST00000336898.7	protein_coding	75525210,75490237,75477619,75462786,75457693,75456757,75449885,75449517,75448977,75444413,75443136,75442363,75441646,75441163,75439879,75436936,75434640	75525903,75490320,75477795,75462889,75457786,75456816,75449983,75449610,75449122,75444495,75443286,75442581,75441803,75441310,75439961,75437048,75435655	Gene ID= ENSG00000158555.14 TPM= 4.25 Transcript Type= protein_coding
chr11	75562056	75572783	75562056	75572783	+	ENST00000533603.5@SERPINH1	ENST00000533603.5	protein_coding	75562056,75563727,75566316,75568731,75568939,75571781	75562319,75563770,75566971,75568829,75569171,75572783	Gene ID= ENSG00000149257.13 TPM= 18.06 Transcript Type= protein_coding
chr11	75562086	75572783	75562086	75572783	+	ENST00000358171.7@SERPINH1	ENST00000358171.7	protein_coding	75562086,75566316,75568731,75568939,75571781	75562319,75566971,75568829,75569171,75572783	Gene ID= ENSG00000149257.13 TPM= 65.85 Transcript Type= protein_coding
chr11	75562221	75568315	75562221	75568315	+	transcript4473.chr11.nic@SERPINH1	transcript4473.chr11.nic	protein_coding	75562221,75566316	75562319,75568315	Gene ID= ENSG00000149257.13 TPM= 3.19 Transcript Type= NA
chr11	75577350	75580659	75577350	75580659	+	transcript4474.chr11.nnic@NA	transcript4474.chr11.nnic	NA	75577350	75580659	Gene ID= novel_gene_chr11_4475 TPM= 2.12 Transcript Type= NA
chr11	75586918	75669120	75586918	75669120	-	ENST00000304771.7@MAP6	ENST00000304771.7	protein_coding	75667465,75608109,75605808,75586918	75669120,75608322,75606004,75588184	Gene ID= ENSG00000171533.11 TPM= 12.75 Transcript Type= protein_coding
chr11	75667775	75670964	75667775	75670964	+	transcript4484.chr11.nnic@NA	transcript4484.chr11.nnic	NA	75667775	75670964	Gene ID= novel_gene_chr11_4485 TPM= 5.31 Transcript Type= NA
chr11	75768732	75801534	75768732	75801534	+	ENST00000228027.11@DGAT2	ENST00000228027.11	protein_coding	75768732,75784618,75790188,75790661,75796328,75797158,75798227,75800354	75769112,75784746,75790295,75790731,75796532,75797332,75798429,75801534	Gene ID= ENSG00000062282.14 TPM= 29.74 Transcript Type= protein_coding
chr11	75815167	76143195	75815167	76143195	+	ENST00000356136.7@UVRAG	ENST00000356136.7	protein_coding	75815167,75851883,75861746,75879879,75888829,75911954,75961444,75983387,76004005,76007534,76008807,76016815,76065710,76115924,76140711	75815524,75852000,75861780,75880040,75888903,75912039,75961549,75983513,76004089,76007621,76008867,76016980,76065788,76116015,76143195	Gene ID= ENSG00000198382.8 TPM= 4.25 Transcript Type= protein_coding
chr11	76186396	76209549	76186396	76209549	-	transcript4497.chr11.nnic@WNT11	transcript4497.chr11.nnic	protein_coding	76208652,76206325,76196483,76194567,76191564,76186396	76209549,76206498,76196718,76194844,76191856,76187239	Gene ID= ENSG00000085741.12 TPM= 2.84 Transcript Type= NA
chr11	76186396	76210813	76186396	76210813	-	transcript4499.chr11.nic@WNT11	transcript4499.chr11.nic	protein_coding	76210347,76206325,76196483,76194567,76191564,76186396	76210813,76206498,76196718,76194844,76191856,76187239	Gene ID= ENSG00000085741.12 TPM= 6.02 Transcript Type= NA
chr11	76186396	76210914	76186396	76210914	-	transcript4500.chr11.nnic@WNT11	transcript4500.chr11.nnic	protein_coding	76210472,76206325,76196483,76194567,76191564,76186396	76210914,76206498,76196718,76194844,76191856,76187239	Gene ID= ENSG00000085741.12 TPM= 2.84 Transcript Type= NA
chr11	76209853	76211533	76209853	76211533	+	transcript4505.chr11.nnic@NA	transcript4505.chr11.nnic	NA	76209853	76211533	Gene ID= novel_gene_chr11_4506 TPM= 2.12 Transcript Type= NA
chr11	76349956	76381131	76349956	76381131	-	transcript4509.chr11.nnic@THAP12	transcript4509.chr11.nnic	protein_coding	76380748,76365780,76360956,76355618,76349956	76381131,76365972,76361063,76355654,76352794	Gene ID= ENSG00000137492.7 TPM= 2.66 Transcript Type= NA
chr11	76349956	76380942	76349956	76380942	-	ENST00000260045.7@THAP12	ENST00000260045.7	protein_coding	76380748,76365852,76360956,76355618,76349956	76380942,76365972,76361063,76355654,76352794	Gene ID= ENSG00000137492.7 TPM= 22.84 Transcript Type= protein_coding
chr11	76441338	76444574	76441338	76444574	-	ENST00000530759.1@AP002360.2	ENST00000530759.1	lincRNA	76444278,76441338	76444574,76441639	Gene ID= ENSG00000255135.3 TPM= 4.25 Transcript Type= lincRNA
chr11	76478342	76481333	76478342	76481333	-	transcript4523.chr11.nnic@NA	transcript4523.chr11.nnic	NA	76478342	76481333	Gene ID= novel_gene_chr11_4524 TPM= 4.25 Transcript Type= NA
chr11	76657527	76670747	76657527	76670747	-	ENST00000404995.5@LRRC32	ENST00000404995.5	protein_coding	76670614,76665871,76659583,76657527	76670747,76665958,76661508,76658034	Gene ID= ENSG00000137507.11 TPM= 21.24 Transcript Type= protein_coding
chr11	76783239	76798154	76783239	76798154	+	ENST00000333090.4@TSKU	ENST00000333090.4	protein_coding	76783239,76795609	76783404,76798154	Gene ID= ENSG00000182704.7 TPM= 30.8 Transcript Type= protein_coding
chr11	77179825	77215238	77179825	77215238	+	ENST00000458169.2@MYO7A	ENST00000458169.2	protein_coding	77179825,77180374,77181380,77181951,77182424,77183068,77184588,77189344,77190020,77190697,77192051,77194354,77197481,77198495,77199649,77201451,77202300,77203060,77204076,77205462,77206097,77207289,77208430,77208697,77211152,77211821,77212952,77213860,77214607	77179953,77180481,77181589,77182154,77182600,77183157,77184715,77189470,77190139,77190870,77192278,77194524,77197598,77198621,77199818,77201638,77202424,77203217,77204229,77205617,77206202,77207402,77208517,77208803,77211337,77211937,77213035,77213979,77215238	Gene ID= ENSG00000137474.19 TPM= 1.06 Transcript Type= protein_coding
chr11	77322022	77411971	77322022	77411971	-	transcript4542.chr11.nic@PAK1	transcript4542.chr11.nic	protein_coding	77411774,77392331,77379894,77379241,77374328,77358898,77355668,77353536,77349239,77343819,77340646,77337324,77336086,77332730,77322022	77411971,77392541,77379994,77379388,77374365,77359017,77355842,77353599,77349287,77343931,77340763,77337423,77336282,77332867,77323360	Gene ID= ENSG00000149269.9 TPM= 7.44 Transcript Type= NA
chr11	77321707	77474062	77321707	77474062	-	ENST00000356341.7@PAK1	ENST00000356341.7	protein_coding	77473552,77392331,77379894,77379241,77374328,77358898,77355668,77353536,77349239,77343819,77340646,77337324,77336086,77332730,77321707	77474062,77392541,77379994,77379388,77374365,77359017,77355842,77353599,77349287,77343931,77340763,77337423,77336282,77332867,77323360	Gene ID= ENSG00000149269.9 TPM= 3.19 Transcript Type= protein_coding
chr11	77322017	77412064	77322017	77412064	-	ENST00000530617.5@PAK1	ENST00000530617.5	protein_coding	77411774,77392331,77379894,77379241,77374328,77358898,77355668,77353536,77349239,77343819,77340646,77337324,77336086,77332730,77322017	77412064,77392541,77379994,77379388,77374365,77359017,77355842,77353599,77349287,77343931,77340763,77337423,77336282,77332867,77323154	Gene ID= ENSG00000149269.9 TPM= 1.06 Transcript Type= protein_coding
chr11	77634998	77637257	77634998	77637257	+	transcript4556.chr11.nnic@NA	transcript4556.chr11.nnic	NA	77634998	77637257	Gene ID= novel_gene_chr11_4557 TPM= 3.19 Transcript Type= NA
chr11	77659996	77821017	77659996	77821017	-	ENST00000308488.10@RSF1	ENST00000308488.10	protein_coding	77820528,77764598,77747036,77740731,77725545,77700721,77698487,77693507,77691159,77685105,77683710,77678086,77676792,77675036,77672042,77659996	77821017,77764689,77747128,77740936,77725699,77702495,77698693,77693611,77691238,77685159,77683819,77678153,77676999,77675256,77672230,77667491	Gene ID= ENSG00000048649.13 TPM= 3.72 Transcript Type= protein_coding
chr11	77683769	77820733	77683769	77820733	-	transcript4563.chr11.nic@RSF1	transcript4563.chr11.nic	protein_coding	77820528,77764598,77740731,77725545,77700721,77698487,77693507,77691159,77685105,77683769	77820733,77764689,77740936,77725699,77702495,77698693,77693611,77691238,77685159,77683819	Gene ID= ENSG00000048649.13 TPM= 5.84 Transcript Type= NA
chr11	77821142	77872352	77821142	77872352	+	transcript4576.chr11.nic@AAMDC	transcript4576.chr11.nic	protein_coding	77821142,77842479,77855345,77869722,77872175	77821241,77842628,77855482,77869817,77872352	Gene ID= ENSG00000087884.14 TPM= 3.19 Transcript Type= NA
chr11	77821109	77872352	77821109	77872352	+	transcript4579.chr11.nic@AAMDC	transcript4579.chr11.nic	protein_coding	77821109,77842479,77869722,77872175	77821180,77842628,77869817,77872352	Gene ID= ENSG00000087884.14 TPM= 2.47 Transcript Type= NA
chr11	77821144	77872361	77821144	77872361	+	ENST00000393427.6@AAMDC	ENST00000393427.6	protein_coding	77821144,77842479,77869722,77872175	77821241,77842628,77869817,77872361	Gene ID= ENSG00000087884.14 TPM= 23.72 Transcript Type= protein_coding
chr11	77821129	77872352	77821129	77872352	+	ENST00000526415.5@AAMDC	ENST00000526415.5	protein_coding	77821129,77841019,77842479,77869722,77872175	77821241,77841060,77842628,77869817,77872352	Gene ID= ENSG00000087884.14 TPM= 6.72 Transcript Type= protein_coding
chr11	77821736	77822929	77821736	77822929	+	transcript4586.chr11.nnic@NA	transcript4586.chr11.nnic	NA	77821736	77822929	Gene ID= novel_gene_chr11_4587 TPM= 2.12 Transcript Type= NA
chr11	77878720	77994678	77878720	77994678	-	ENST00000534064.5@INTS4	ENST00000534064.5	protein_coding	77994590,77991108,77981459,77978996,77960953,77960341,77958746,77955942,77941180,77938651,77928342,77924750,77922356,77921340,77918821,77907717,77903540,77901421,77894290,77891681,77891319,77883832,77878720	77994678,77991299,77981576,77979102,77961138,77960391,77958834,77956062,77941251,77938825,77928547,77924892,77922471,77921473,77918978,77907810,77903620,77901551,77894349,77891840,77891462,77883952,77879127	Gene ID= ENSG00000149262.16 TPM= 15.93 Transcript Type= protein_coding
chr11	77924442	77994666	77924442	77994666	-	ENST00000529807.5@INTS4	ENST00000529807.5	protein_coding	77994590,77991108,77981459,77978996,77960953,77960341,77958746,77955942,77941180,77938651,77928342,77924442	77994666,77991299,77981576,77979102,77961138,77960391,77958834,77956062,77941251,77938825,77928547,77924892	Gene ID= ENSG00000149262.16 TPM= 2.12 Transcript Type= protein_coding
chr11	78063861	78068351	78063861	78068351	+	ENST00000281030.2@THRSP	ENST00000281030.2	protein_coding	78063861,78067659	78064341,78068351	Gene ID= ENSG00000151365.2 TPM= 2.12 Transcript Type= protein_coding
chr11	78068304	78080219	78068304	78080219	-	ENST00000281031.4@NDUFC2	ENST00000281031.4	protein_coding	78079579,78072998,78068304	78080219,78073141,78070036	Gene ID= ENSG00000151366.12 TPM= 211.37 Transcript Type= protein_coding
chr11	78069856	78079819	78069856	78079819	-	ENST00000534029.5@NDUFC2	ENST00000534029.5	protein_coding	78079579,78069856	78079819,78070036	Gene ID= ENSG00000151366.12 TPM= 1.06 Transcript Type= protein_coding
chr11	78100942	78139660	78100942	78139660	-	ENST00000299626.9@ALG8	ENST00000299626.9	protein_coding	78139494,78127358,78124021,78121065,78119182,78114266,78113886,78112650,78109442,78106807,78104356,78103980,78100942	78139660,78127436,78124214,78121174,78119249,78114392,78113989,78112770,78109581,78106946,78104453,78104052,78101195	Gene ID= ENSG00000159063.12 TPM= 10.09 Transcript Type= protein_coding
chr11	78100947	78139592	78100947	78139592	-	ENST00000376156.7@ALG8	ENST00000376156.7	protein_coding	78139494,78127358,78124021,78121065,78119182,78114266,78113886,78112650,78109442,78106807,78104356,78103980,78102874,78100947	78139592,78127436,78124214,78121174,78119249,78114392,78113989,78112770,78109581,78106946,78104453,78104052,78102948,78101195	Gene ID= ENSG00000159063.12 TPM= 2.66 Transcript Type= protein_coding
chr11	78171249	78188822	78171249	78188822	-	ENST00000340067.3@KCTD21	ENST00000340067.3	protein_coding	78188573,78171249	78188822,78174583	Gene ID= ENSG00000188997.7 TPM= 12.75 Transcript Type= protein_coding
chr11	78179207	78182300	78179207	78182300	-	transcript4601.chr11.nnic@NA	transcript4601.chr11.nnic	NA	78179207	78182300	Gene ID= novel_gene_chr11_4602 TPM= 2.12 Transcript Type= NA
chr11	78215504	78218514	78215504	78218514	-	transcript4605.chr11.nnic@NA	transcript4605.chr11.nnic	NA	78215504	78218514	Gene ID= novel_gene_chr11_4606 TPM= 2.12 Transcript Type= NA
chr11	78435961	78574864	78435961	78574864	-	ENST00000281038.9@NARS2	ENST00000281038.9	protein_coding	78574348,78571335,78568632,78566132,78559539,78528842,78493063,78478585,78478438,78469247,78465876,78443661,78441091,78435961	78574864,78571444,78568752,78566272,78559619,78528936,78493195,78478683,78478475,78469313,78466013,78443758,78441117,78436814	Gene ID= ENSG00000137513.9 TPM= 24.43 Transcript Type= protein_coding
chr11	78436223	78574876	78436223	78574876	-	transcript4611.chr11.nic@NARS2	transcript4611.chr11.nic	protein_coding	78574829,78571335,78568632,78566132,78559539,78528842,78493063,78478585,78478438,78469247,78465876,78443661,78441091,78436223	78574876,78571444,78568752,78566272,78559619,78528936,78493195,78478683,78478475,78469313,78466013,78443758,78441117,78436814	Gene ID= ENSG00000137513.9 TPM= 6.37 Transcript Type= NA
chr11	78436223	78574864	78436223	78574864	-	transcript4615.chr11.nnic@NARS2	transcript4615.chr11.nnic	protein_coding	78574348,78571335,78568632,78566132,78559539,78528842,78469247,78465876,78443661,78441091,78436223	78574864,78571444,78568752,78566272,78559619,78528936,78469313,78466013,78443758,78441117,78436814	Gene ID= ENSG00000137513.9 TPM= 2.12 Transcript Type= NA
chr11	82823502	82900597	82823502	82900597	-	ENST00000313010.7@PRCP	ENST00000313010.7	protein_coding	82900235,82859977,82853177,82850324,82849914,82849049,82839261,82838387,82823502	82900597,82860117,82853278,82850505,82850071,82849218,82839425,82838574,82825122	Gene ID= ENSG00000137509.10 TPM= 36.11 Transcript Type= protein_coding
chr11	82979268	83071923	82979268	83071923	-	ENST00000534141.5@RAB30	ENST00000534141.5	protein_coding	83071691,82997224,82994039,82987591,82979268	83071923,82997324,82994122,82987770,82982415	Gene ID= ENSG00000137502.9 TPM= 2.12 Transcript Type= protein_coding
chr11	83031523	83071758	83031523	83071758	-	transcript4628.chr11.nic@RAB30	transcript4628.chr11.nic	protein_coding	83071691,83031523	83071758,83034272	Gene ID= ENSG00000137502.9 TPM= 2.12 Transcript Type= NA
chr11	83046499	83049602	83046499	83049602	-	transcript4629.chr11.nnic@NA	transcript4629.chr11.nnic	NA	83046499	83049602	Gene ID= novel_gene_chr11_4630 TPM= 2.12 Transcript Type= NA
chr11	83072066	83073646	83072066	83073646	+	ENST00000501011.6@RAB30-AS1	ENST00000501011.6	lincRNA	83072066,83072623,83073303	83072146,83072804,83073646	Gene ID= ENSG00000246067.7 TPM= 7.44 Transcript Type= lincRNA
chr11	83072343	83073600	83072343	83073600	+	ENST00000528156.1@RAB30-AS1	ENST00000528156.1	lincRNA	83072343,83073303	83072702,83073600	Gene ID= ENSG00000246067.7 TPM= 2.12 Transcript Type= lincRNA
chr11	83157193	83165958	83157193	83165958	+	transcript4635.chr11.nic@PCF11	transcript4635.chr11.nic	protein_coding	83157193,83161327,83163679,83164207,83165600	83157631,83161452,83163867,83164401,83165958	Gene ID= ENSG00000165494.11 TPM= 2.12 Transcript Type= NA
chr11	83190452	83193693	83190452	83193693	-	transcript4636.chr11.nnic@NA	transcript4636.chr11.nnic	NA	83190452	83193693	Gene ID= novel_gene_chr11_4637 TPM= 2.12 Transcript Type= NA
chr11	83193739	83215200	83193739	83215200	+	ENST00000393389.7@ANKRD42	ENST00000393389.7	protein_coding	83193739,83198479,83206058,83210300,83211295,83212653	83194728,83198642,83206165,83210419,83211430,83215200	Gene ID= ENSG00000137494.13 TPM= 2.12 Transcript Type= protein_coding
chr11	83259097	83286407	83259097	83286407	-	ENST00000529689.5@CCDC90B	ENST00000529689.5	protein_coding	83285873,83280141,83278726,83274639,83273951,83273793,83273647,83265865,83259097	83286407,83280260,83278829,83274740,83273992,83273864,83273700,83265979,83261966	Gene ID= ENSG00000137500.9 TPM= 1.06 Transcript Type= protein_coding
chr11	83261317	83286390	83261317	83286390	-	ENST00000455220.6@CCDC90B	ENST00000455220.6	protein_coding	83286100,83280141,83278726,83274639,83273951,83273793,83273647,83265865,83261317	83286390,83280260,83278829,83274740,83273992,83273864,83273700,83265979,83261966	Gene ID= ENSG00000137500.9 TPM= 2.12 Transcript Type= protein_coding
chr11	83261456	83285906	83261456	83285906	-	transcript4656.chr11.nic@CCDC90B	transcript4656.chr11.nic	protein_coding	83285553,83280141,83274639,83273951,83273793,83273647,83265865,83261456	83285906,83280260,83274740,83273992,83273864,83273700,83265979,83261966	Gene ID= ENSG00000137500.9 TPM= 2.12 Transcript Type= NA
chr11	83261456	83286351	83261456	83286351	-	ENST00000525503.5@CCDC90B	ENST00000525503.5	protein_coding	83285553,83280141,83278726,83274639,83273951,83273793,83273647,83265865,83261456	83286351,83280260,83278829,83274740,83273992,83273864,83273700,83265979,83261966	Gene ID= ENSG00000137500.9 TPM= 9.56 Transcript Type= protein_coding
chr11	85584009	85585366	85584009	85585366	-	transcript4667.chr11.nnic@NA	transcript4667.chr11.nnic	NA	85584009	85585366	Gene ID= novel_gene_chr11_4668 TPM= 2.12 Transcript Type= NA
chr11	85628573	85636539	85628573	85636539	+	ENST00000393375.5@TMEM126B	ENST00000393375.5	protein_coding	85628573,85631145,85631687,85634086,85635667,85636046	85628688,85631316,85631808,85634279,85635778,85636539	Gene ID= ENSG00000171204.12 TPM= 13.28 Transcript Type= protein_coding
chr11	85628585	85636502	85628585	85636502	+	ENST00000358867.10@TMEM126B	ENST00000358867.10	protein_coding	85628585,85631687,85634086,85635667,85636046	85628688,85631808,85634279,85635778,85636502	Gene ID= ENSG00000171204.12 TPM= 8.5 Transcript Type= protein_coding
chr11	85628604	85636507	85628604	85636507	+	ENST00000526822.5@TMEM126B	ENST00000526822.5	protein_coding	85628604,85634086,85635667,85636046	85628688,85634279,85635778,85636507	Gene ID= ENSG00000171204.12 TPM= 2.12 Transcript Type= nonsense_mediated_decay
chr11	85628605	85636510	85628605	85636510	+	ENST00000529197.1@TMEM126B	ENST00000529197.1	protein_coding	85628605,85631145,85631687,85634086,85635667,85636046	85628688,85631316,85631808,85634279,85635778,85636510	Gene ID= ENSG00000171204.12 TPM= 3.72 Transcript Type= nonsense_mediated_decay
chr11	85647977	85656542	85647977	85656542	+	ENST00000528105.5@TMEM126A	ENST00000528105.5	protein_coding	85647977,85654063,85655594,85656309	85648089,85654256,85655708,85656542	Gene ID= ENSG00000171202.6 TPM= 6.37 Transcript Type= protein_coding
chr11	85647988	85656543	85647988	85656543	+	ENST00000304511.6@TMEM126A	ENST00000304511.6	protein_coding	85647988,85650249,85654063,85655594,85656309	85648089,85650341,85654256,85655708,85656543	Gene ID= ENSG00000171202.6 TPM= 19.12 Transcript Type= protein_coding
chr11	85647987	85656547	85647987	85656547	+	ENST00000531366.5@TMEM126A	ENST00000531366.5	protein_coding	85647987,85650249,85654063,85655594,85656309	85648089,85650341,85654234,85655708,85656547	Gene ID= ENSG00000171202.6 TPM= 1.06 Transcript Type= nonsense_mediated_decay
chr11	85659708	85665128	85659708	85665128	-	transcript4690.chr11.nic@CREBZF	transcript4690.chr11.nic	protein_coding	85663815,85663524,85659708	85665128,85663601,85662457	Gene ID= ENSG00000137504.13 TPM= 4.25 Transcript Type= NA
chr11	85661066	85665102	85661066	85665102	-	ENST00000527447.1@CREBZF	ENST00000527447.1	protein_coding	85661066	85665102	Gene ID= ENSG00000137504.13 TPM= 9.03 Transcript Type= protein_coding
chr11	85659708	85665102	85659708	85665102	-	ENST00000490820.2@CREBZF	ENST00000490820.2	protein_coding	85663524,85659708	85665102,85662457	Gene ID= ENSG00000137504.13 TPM= 4.78 Transcript Type= nonsense_mediated_decay
chr11	85684866	85686277	85684866	85686277	-	ENST00000316398.4@CCDC89	ENST00000316398.4	protein_coding	85684866	85686277	Gene ID= ENSG00000179071.4 TPM= 1.06 Transcript Type= protein_coding
chr11	85694275	85719080	85694275	85719080	-	transcript4704.chr11.nic@SYTL2	transcript4704.chr11.nic	protein_coding	85718790,85717483,85714413,85709331,85707429,85704858,85700515,85697979,85696183,85694275	85719080,85717530,85714507,85709500,85707531,85705028,85700593,85698078,85696388,85695340	Gene ID= ENSG00000137501.17 TPM= 3.19 Transcript Type= NA
chr11	85694726	85719168	85694726	85719168	-	ENST00000389958.7@SYTL2	ENST00000389958.7	protein_coding	85718790,85711113,85709331,85707429,85704858,85700515,85697979,85696183,85694726	85719168,85711232,85709500,85707531,85705028,85700593,85698078,85696388,85695340	Gene ID= ENSG00000137501.17 TPM= 1.06 Transcript Type= protein_coding
chr11	85957684	86069119	85957684	86069119	-	transcript4711.chr11.nic@PICALM	transcript4711.chr11.nic	protein_coding	86068651,86031469,86026292,86022367,86014870,86012281,86011030,86007542,86003366,86001035,86000643,85996826,85983866,85981872,85981745,85981129,85978070,85976623,85974708,85960675,85957684	86069119,86031611,86026367,86022469,86014963,86012392,86011136,86007583,86003451,86001158,86000779,85996929,85983973,85981988,85981775,85981228,85978093,85976682,85974812,85960777,85959060	Gene ID= ENSG00000073921.17 TPM= 9.67 Transcript Type= NA
chr11	85957684	86069119	85957684	86069119	-	transcript4715.chr11.nic@PICALM	transcript4715.chr11.nic	protein_coding	86068651,86031469,86026292,86022367,86014870,86012281,86011030,86007542,86003366,86001035,86000643,85996826,85983866,85981872,85981745,85981129,85978070,85976623,85974708,85957684	86069119,86031611,86026367,86022469,86014963,86012392,86011136,86007583,86003451,86001158,86000779,85996929,85983973,85981988,85981775,85981228,85978093,85976682,85974812,85959060	Gene ID= ENSG00000073921.17 TPM= 18.69 Transcript Type= NA
chr11	85957684	86069059	85957684	86069059	-	ENST00000532317.5@PICALM	ENST00000532317.5	protein_coding	86068651,86031469,86026292,86022367,86014870,86012281,86011030,86007542,86003366,86001035,86000643,85996826,85983866,85981872,85981745,85981129,85978070,85976623,85974708,85957684	86069059,86031611,86026367,86022469,86014963,86012392,86011136,86007583,86003451,86001158,86000779,85996929,85983973,85982003,85981775,85981228,85978093,85976682,85974812,85959060	Gene ID= ENSG00000073921.17 TPM= 47.37 Transcript Type= protein_coding
chr11	85957688	86069097	85957688	86069097	-	ENST00000526033.5@PICALM	ENST00000526033.5	protein_coding	86068651,86031469,86026292,86022367,86014870,86012281,86011030,86007542,86003366,86001035,86000643,85996826,85990250,85983866,85981872,85981745,85981129,85976623,85974708,85957688	86069097,86031611,86026367,86022469,86014963,86012392,86011136,86007583,86003451,86001158,86000779,85996929,85990378,85983973,85982003,85981775,85981228,85976682,85974812,85959060	Gene ID= ENSG00000073921.17 TPM= 7.01 Transcript Type= protein_coding
chr11	86034448	86036955	86034448	86036955	+	transcript4728.chr11.nnic@NA	transcript4728.chr11.nnic	NA	86034448	86036955	Gene ID= novel_gene_chr11_4729 TPM= 2.12 Transcript Type= NA
chr11	86036512	86039121	86036512	86039121	+	transcript4730.chr11.nnic@NA	transcript4730.chr11.nnic	NA	86036512	86039121	Gene ID= novel_gene_chr11_4731 TPM= 2.12 Transcript Type= NA
chr11	86057015	86062529	86057015	86062529	+	transcript4726.chr11.nnic@NA	transcript4726.chr11.nnic	NA	86057015	86062529	Gene ID= novel_gene_chr11_4727 TPM= 5.31 Transcript Type= NA
chr11	86062105	86063886	86062105	86063886	+	transcript4724.chr11.nnic@NA	transcript4724.chr11.nnic	NA	86062105	86063886	Gene ID= novel_gene_chr11_4725 TPM= 6.37 Transcript Type= NA
chr11	86244544	86278736	86244544	86278736	+	ENST00000263360.10@EED	ENST00000263360.10	protein_coding	86244544,86250296,86252148,86255222,86256387,86257515,86264172,86266083,86268456,86276980,86277918,86278399	86245343,86250448,86252240,86255287,86256512,86257596,86264263,86266216,86268561,86277138,86277991,86278736	Gene ID= ENSG00000074266.19 TPM= 14.34 Transcript Type= protein_coding
chr11	86244774	86278739	86244774	86278739	+	transcript4735.chr11.nnic@EED	transcript4735.chr11.nnic	protein_coding	86244774,86250296,86255222,86256387,86257515,86264172,86266083,86268456,86276980,86277918,86278399	86245343,86250448,86255287,86256512,86257596,86264263,86266216,86268561,86277138,86277991,86278739	Gene ID= ENSG00000074266.19 TPM= 7.97 Transcript Type= NA
chr11	86272058	86274797	86272058	86274797	-	transcript4738.chr11.nnic@NA	transcript4738.chr11.nnic	NA	86272058	86274797	Gene ID= novel_gene_chr11_4739 TPM= 2.12 Transcript Type= NA
chr11	86302223	86345931	86302223	86345931	+	ENST00000278483.7@HIKESHI	ENST00000278483.7	protein_coding	86302223,86306245,86337379,86344603,86345584	86302478,86306482,86337530,86344721,86345931	Gene ID= ENSG00000149196.15 TPM= 38.24 Transcript Type= protein_coding
chr11	86302221	86345662	86302221	86345662	+	transcript4743.chr11.nnic@HIKESHI	transcript4743.chr11.nnic	protein_coding	86302221,86306245,86337379,86344663,86345584	86302478,86306482,86337530,86344721,86345662	Gene ID= ENSG00000149196.15 TPM= 2.12 Transcript Type= NA
chr11	86306333	86345662	86306333	86345662	+	ENST00000618164.1@HIKESHI	ENST00000618164.1	protein_coding	86306333,86306416,86337379,86344603,86345584	86306414,86306482,86337530,86344721,86345662	Gene ID= ENSG00000149196.15 TPM= 1.06 Transcript Type= protein_coding
chr11	86302211	86345638	86302211	86345638	+	ENST00000533986.5@HIKESHI	ENST00000533986.5	protein_coding	86302211,86306245,86337379,86344603	86302478,86306482,86337530,86345638	Gene ID= ENSG00000149196.15 TPM= 2.12 Transcript Type= protein_coding
chr11	86302243	86345791	86302243	86345791	+	ENST00000531485.5@HIKESHI	ENST00000531485.5	protein_coding	86302243,86337379,86344603,86345584	86302478,86337530,86344721,86345791	Gene ID= ENSG00000149196.15 TPM= 3.19 Transcript Type= processed_transcript
chr11	86441110	86672636	86441110	86672636	-	ENST00000543262.5@ME3	ENST00000543262.5	protein_coding	86672324,86671762,86559690,86556553,86508792,86497963,86487337,86465091,86450301,86449889,86448150,86447065,86446314,86442821,86441110	86672636,86671958,86559823,86556702,86508867,86498124,86487440,86465200,86450398,86450002,86448255,86447207,86446487,86442919,86441440	Gene ID= ENSG00000151376.16 TPM= 3.72 Transcript Type= protein_coding
chr11	86441194	86672426	86441194	86672426	-	transcript4756.chr11.nic@ME3	transcript4756.chr11.nic	protein_coding	86672274,86671762,86559690,86556553,86508792,86497963,86487337,86465091,86450301,86449889,86448150,86447065,86446314,86442821,86441194	86672426,86671958,86559823,86556702,86508867,86498124,86487440,86465200,86450398,86450002,86448255,86447207,86446487,86442919,86441440	Gene ID= ENSG00000151376.16 TPM= 4.25 Transcript Type= NA
chr11	86441108	86672198	86441108	86672198	-	ENST00000393324.7@ME3	ENST00000393324.7	protein_coding	86671762,86559690,86556553,86508792,86497963,86487337,86465091,86450301,86449889,86448150,86447065,86446314,86442821,86441108	86672198,86559823,86556702,86508867,86498124,86487440,86465200,86450398,86450002,86448255,86447207,86446487,86442919,86441440	Gene ID= ENSG00000151376.16 TPM= 12.21 Transcript Type= protein_coding
chr11	86462032	86672179	86462032	86672179	-	transcript4764.chr11.nnic@ME3	transcript4764.chr11.nnic	protein_coding	86671762,86559690,86556553,86508792,86497963,86487337,86465091,86464865,86462032	86672179,86559823,86556702,86508867,86498124,86487440,86465200,86464904,86462272	Gene ID= ENSG00000151376.16 TPM= 3.19 Transcript Type= NA
chr11	86800521	86952788	86800521	86952788	+	ENST00000532234.5@PRSS23	ENST00000532234.5	protein_coding	86800521,86823377,86939020,86950356,86951216	86800651,86823593,86939126,86950499,86952788	Gene ID= ENSG00000150687.11 TPM= 1.06 Transcript Type= nonsense_mediated_decay
chr11	86800240	86811233	86800240	86811233	+	ENST00000280258.5@PRSS23	ENST00000280258.5	protein_coding	86800240,86807631	86800651,86811233	Gene ID= ENSG00000150687.11 TPM= 64.79 Transcript Type= protein_coding
chr11	86911970	86914059	86911970	86914059	+	transcript4781.chr11.nnic@NA	transcript4781.chr11.nnic	NA	86911970	86914059	Gene ID= novel_gene_chr11_4782 TPM= 3.19 Transcript Type= NA
chr11	88293592	88337787	88293592	88337787	-	ENST00000227266.9@CTSC	ENST00000227266.9	protein_coding	88337501,88334937,88312388,88309163,88300530,88296133,88293592	88337787,88335082,88312554,88309318,88300645,88296264,88294508	Gene ID= ENSG00000109861.15 TPM= 5.31 Transcript Type= protein_coding
chr11	90201160	90223364	90201160	90223364	-	ENST00000320585.10@CHORDC1	ENST00000320585.10	protein_coding	90222891,90218135,90215174,90214018,90211215,90210536,90206202,90205460,90203308,90202813,90201160	90223364,90218184,90215230,90214175,90211318,90210594,90206272,90205565,90203427,90202875,90202551	Gene ID= ENSG00000110172.11 TPM= 18.06 Transcript Type= protein_coding
chr11	90210571	90223049	90210571	90223049	-	ENST00000533772.5@CHORDC1	ENST00000533772.5	protein_coding	90222891,90218135,90215174,90214018,90211215,90210571	90223049,90218184,90215230,90214175,90211335,90210591	Gene ID= ENSG00000110172.11 TPM= 1.06 Transcript Type= nonsense_mediated_decay
chr11	93478472	93543354	93478472	93543354	-	transcript4828.chr11.nnic@SMCO4	transcript4828.chr11.nnic	protein_coding	93543276,93499276,93479372,93478472	93543354,93499348,93479503,93479269	Gene ID= ENSG00000166002.6 TPM= 3.72 Transcript Type= NA
chr11	93478472	93543363	93478472	93543363	-	transcript4830.chr11.nnic@SMCO4	transcript4830.chr11.nnic	protein_coding	93543276,93479372,93478472	93543363,93479503,93479269	Gene ID= ENSG00000166002.6 TPM= 3.72 Transcript Type= NA
chr11	93478472	93543508	93478472	93543508	-	ENST00000298966.6@SMCO4	ENST00000298966.6	protein_coding	93543276,93499276,93478472	93543508,93499348,93479269	Gene ID= ENSG00000166002.6 TPM= 40.89 Transcript Type= protein_coding
chr11	93478472	93543389	93478472	93543389	-	transcript4834.chr11.nnic@SMCO4	transcript4834.chr11.nnic	protein_coding	93543276,93478472	93543389,93479269	Gene ID= ENSG00000166002.6 TPM= 4.78 Transcript Type= NA
chr11	93478828	93543389	93478828	93543389	-	transcript4835.chr11.nnic@SMCO4	transcript4835.chr11.nnic	protein_coding	93543276,93478828	93543389,93479269	Gene ID= ENSG00000166002.6 TPM= 2.12 Transcript Type= NA
chr11	93735567	93741945	93735567	93741945	-	ENST00000448108.6@TAF1D	ENST00000448108.6	protein_coding	93741322,93739237,93738109,93737064,93736694,93735567	93741945,93739331,93738499,93737239,93736751,93736304	Gene ID= ENSG00000166012.16 TPM= 2.12 Transcript Type= protein_coding
chr11	93741662	93763083	93741662	93763083	+	transcript4843.chr11.nnic@C11orf54	transcript4843.chr11.nnic	protein_coding	93741662,93743018,93747297,93750346,93753682,93753936,93755210,93757316,93759742,93761515	93741728,93743307,93747448,93750444,93753755,93754037,93755386,93757465,93759858,93763083	Gene ID= ENSG00000182919.14 TPM= 2.39 Transcript Type= NA
chr11	93741662	93763083	93741662	93763083	+	transcript4845.chr11.nnic@C11orf54	transcript4845.chr11.nnic	protein_coding	93741662,93743018,93747297,93750346,93753682,93753936,93755210,93757316,93759742,93761515	93741728,93743765,93747448,93750444,93753755,93754037,93755386,93757465,93759858,93763083	Gene ID= ENSG00000182919.14 TPM= 3.45 Transcript Type= NA
chr11	93741594	93763102	93741594	93763102	+	ENST00000540113.5@C11orf54	ENST00000540113.5	protein_coding	93741594,93750346,93753682,93753936,93755210,93757316,93759742,93761515	93741728,93750444,93753755,93754037,93755386,93757465,93759858,93763102	Gene ID= ENSG00000182919.14 TPM= 6.64 Transcript Type= protein_coding
chr11	93741594	93763102	93741594	93763102	+	ENST00000617482.4@C11orf54	ENST00000617482.4	protein_coding	93741594,93747297,93750346,93753682,93753936,93757316,93759742,93761515	93741728,93747448,93750444,93753755,93754037,93757465,93759858,93763102	Gene ID= ENSG00000182919.14 TPM= 2.39 Transcript Type= protein_coding
chr11	93741669	93762316	93741669	93762316	+	ENST00000354421.7@C11orf54	ENST00000354421.7	protein_coding	93741669,93747297,93750346,93753682,93753936,93755210,93757316,93759742,93761515	93741728,93747448,93750444,93753755,93754037,93755386,93757465,93759858,93762316	Gene ID= ENSG00000182919.14 TPM= 3.19 Transcript Type= protein_coding
chr11	93784227	93814963	93784227	93814963	+	ENST00000251871.8@MED17	ENST00000251871.8	protein_coding	93784227,93788001,93790574,93793728,93793951,93794908,93796410,93797535,93801835,93807518,93809717,93811853	93784763,93788167,93790793,93793864,93794035,93795060,93796540,93797719,93801972,93807635,93809876,93814963	Gene ID= ENSG00000042429.11 TPM= 1.06 Transcript Type= protein_coding
chr11	94128928	94181972	94128928	94181972	+	ENST00000227638.7@PANX1	ENST00000227638.7	protein_coding	94128928,94153491,94178369,94179602,94180790	94129493,94153630,94178592,94180257,94181972	Gene ID= ENSG00000110218.8 TPM= 28.68 Transcript Type= protein_coding
chr11	94419878	94493852	94419878	94493852	-	transcript4879.chr11.nic@MRE11	transcript4879.chr11.nic	protein_coding	94493684,94492782,94490833,94485924,94479674,94478735,94476289,94471574,94470471,94467813,94464113,94460936,94459408,94456276,94447219,94445810,94437177,94435832,94429911,94419878	94493852,94492906,94490965,94486084,94479761,94478876,94476403,94471759,94470642,94467893,94464239,94461036,94459581,94456338,94447438,94445893,94437235,94435899,94429986,94420181	Gene ID= ENSG00000020922.12 TPM= 7.44 Transcript Type= NA
chr11	94493629	94499583	94493629	94499583	+	ENST00000544612.5@ANKRD49	ENST00000544612.5	protein_coding	94493629,94496604,94498071	94494035,94496951,94499583	Gene ID= ENSG00000168876.8 TPM= 3.19 Transcript Type= protein_coding
chr11	94512432	94532123	94512432	94532123	+	ENST00000542198.2@C11orf97	ENST00000542198.2	protein_coding	94512432,94517583,94528084,94531896	94512673,94517687,94528209,94532123	Gene ID= ENSG00000257057.2 TPM= 1.06 Transcript Type= protein_coding
chr11	94543840	94549898	94543840	94549898	+	ENST00000358752.3@FUT4	ENST00000358752.3	protein_coding	94543840	94549898	Gene ID= ENSG00000196371.3 TPM= 5.31 Transcript Type= protein_coding
chr11	94706155	94876668	94706155	94876668	+	transcript4891.chr11.nic@AMOTL1	transcript4891.chr11.nic	protein_coding	94706155,94728921,94740938,94795011,94799390,94821530,94830050,94831452,94850114,94853933,94859525,94864735,94865942,94869198,94870689	94706597,94729055,94740988,94795160,94800311,94821821,94830194,94831541,94850259,94854082,94859715,94864860,94866168,94869473,94876668	Gene ID= ENSG00000166025.17 TPM= 46.74 Transcript Type= NA
chr11	94962622	94973612	94962622	94973612	-	ENST00000279839.7@CWC15	ENST00000279839.7	protein_coding	94973498,94972055,94971375,94970977,94969989,94966295,94962622	94973612,94972193,94971487,94971065,94970096,94966413,94963514	Gene ID= ENSG00000150316.11 TPM= 8.5 Transcript Type= protein_coding
chr11	94963368	94973586	94963368	94973586	-	ENST00000621358.4@CWC15	ENST00000621358.4	protein_coding	94973498,94972055,94970977,94969989,94966295,94963368	94973586,94972193,94971487,94970096,94966413,94963514	Gene ID= ENSG00000150316.11 TPM= 1.06 Transcript Type= retained_intron
chr11	94973681	94999518	94973681	94999518	+	ENST00000335080.5@KDM4D	ENST00000335080.5	protein_coding	94973681,94975654,94997024	94974068,94975748,94999518	Gene ID= ENSG00000186280.6 TPM= 3.19 Transcript Type= protein_coding
chr11	95067197	95071224	95067197	95071224	+	ENST00000587424.2@SRSF8	ENST00000587424.2	protein_coding	95067197	95071224	Gene ID= ENSG00000263465.4 TPM= 2.12 Transcript Type= protein_coding
chr11	95089810	95132645	95089810	95132645	+	ENST00000278505.4@ENDOD1	ENST00000278505.4	protein_coding	95089810,95128377	95090227,95132645	Gene ID= ENSG00000149218.4 TPM= 14.87 Transcript Type= protein_coding
chr11	95165513	95231197	95165513	95231197	-	ENST00000536441.6@SESN3	ENST00000536441.6	protein_coding	95230783,95193457,95191404,95189779,95185256,95184420,95178710,95177719,95175498,95165513	95231197,95193522,95191601,95189961,95185492,95184594,95178828,95177909,95175642,95173341	Gene ID= ENSG00000149212.11 TPM= 10.62 Transcript Type= protein_coding
chr11	95790461	95832693	95790461	95832693	+	ENST00000325542.9@CEP57	ENST00000325542.9	protein_coding	95790461,95799232,95812932,95813468,95817787,95818827,95821871,95822499,95827786,95829187,95831026	95790743,95799388,95813111,95813589,95817903,95818904,95821978,95822576,95828027,95829331,95832693	Gene ID= ENSG00000166037.10 TPM= 11.68 Transcript Type= protein_coding
chr11	95790461	95832691	95790461	95832691	+	ENST00000325486.9@CEP57	ENST00000325486.9	protein_coding	95790461,95799232,95812932,95813468,95817787,95818827,95821871,95827786,95829187,95831026	95790743,95799388,95813111,95813589,95817903,95818904,95821978,95828027,95829331,95832691	Gene ID= ENSG00000166037.10 TPM= 1.06 Transcript Type= protein_coding
chr11	95790522	95818903	95790522	95818903	+	ENST00000541365.5@CEP57	ENST00000541365.5	protein_coding	95790522,95799237,95812932,95813468,95817787,95818827	95790743,95799388,95813111,95813589,95817903,95818903	Gene ID= ENSG00000166037.10 TPM= 2.12 Transcript Type= protein_coding
chr11	95834089	95924114	95834089	95924114	-	transcript4941.chr11.nic@MTMR2	transcript4941.chr11.nic	protein_coding	95923875,95888156,95887612,95865601,95862272,95861992,95858531,95857552,95850600,95849674,95847714,95844953,95841617,95838094,95836148,95834089	95924114,95888261,95887684,95865676,95862366,95862102,95858632,95857635,95850749,95849862,95847899,95845159,95841709,95838207,95836324,95835451	Gene ID= ENSG00000087053.18 TPM= 6.37 Transcript Type= NA
chr11	95834089	95924100	95834089	95924100	-	ENST00000352297.11@MTMR2	ENST00000352297.11	protein_coding	95923875,95914242,95888156,95865601,95862272,95861992,95858531,95857552,95850600,95849674,95847714,95844953,95841617,95838094,95836148,95834089	95924100,95914312,95888261,95865676,95862366,95862102,95858632,95857635,95850749,95849862,95847899,95845159,95841709,95838207,95836324,95835451	Gene ID= ENSG00000087053.18 TPM= 6.37 Transcript Type= protein_coding
chr11	95834088	95924096	95834088	95924096	-	ENST00000409459.5@MTMR2	ENST00000409459.5	protein_coding	95923875,95914242,95888156,95887612,95865601,95862272,95861992,95858531,95857552,95850600,95849674,95847714,95844953,95841617,95838094,95836148,95834088	95924096,95914312,95888261,95887684,95865676,95862366,95862102,95858632,95857635,95850749,95849862,95847899,95845159,95841709,95838207,95836324,95835451	Gene ID= ENSG00000087053.18 TPM= 3.19 Transcript Type= protein_coding
chr11	95920483	95924109	95920483	95924109	-	transcript4951.chr11.nnic@NA	transcript4951.chr11.nnic	NA	95920483	95924109	Gene ID= novel_gene_chr11_4952 TPM= 4.25 Transcript Type= NA
chr11	96352769	96389927	96352769	96389927	-	transcript4955.chr11.nic@CCDC82	transcript4955.chr11.nic	protein_coding	96389844,96387530,96386254,96383962,96383269,96373375,96371013,96364980,96358993,96352769	96389927,96387613,96386293,96384761,96383473,96373467,96371137,96365150,96359178,96353714	Gene ID= ENSG00000149231.11 TPM= 18.06 Transcript Type= NA
chr11	96352769	96389927	96352769	96389927	-	transcript4958.chr11.nnic@CCDC82	transcript4958.chr11.nnic	protein_coding	96389844,96383269,96373375,96371013,96364980,96358993,96352769	96389927,96383473,96373467,96371137,96365150,96359178,96353714	Gene ID= ENSG00000149231.11 TPM= 7.44 Transcript Type= NA
chr11	96389994	96393257	96389994	96393257	+	ENST00000332349.4@JRKL	ENST00000332349.4	protein_coding	96389994,96390483	96390073,96393257	Gene ID= ENSG00000183340.6 TPM= 6.37 Transcript Type= protein_coding
chr11	96390020	96390778	96390020	96390778	+	transcript4969.chr11.nnic@NA	transcript4969.chr11.nnic	NA	96390020	96390778	Gene ID= novel_gene_chr11_4970 TPM= 3.19 Transcript Type= NA
chr11	100834844	100837983	100834844	100837983	-	transcript4975.chr11.nnic@NA	transcript4975.chr11.nnic	NA	100834844	100837983	Gene ID= novel_gene_chr11_4976 TPM= 3.19 Transcript Type= NA
chr11	101029624	101130524	101029624	101130524	-	ENST00000325455.9@PGR	ENST00000325455.9	protein_coding	101127434,101126007,101091760,101062447,101051424,101049929,101041945,101029624	101130524,101126158,101091876,101062752,101051568,101050059,101042102,101039271	Gene ID= ENSG00000082175.14 TPM= 6.37 Transcript Type= protein_coding
chr11	101060462	101128075	101060462	101128075	-	transcript4987.chr11.nic@PGR	transcript4987.chr11.nic	protein_coding	101127434,101126007,101091760,101060462	101128075,101126158,101091876,101062752	Gene ID= ENSG00000082175.14 TPM= 2.12 Transcript Type= NA
chr11	101034315	101107367	101034315	101107367	+	transcript4990.chr11.nnic@NA	transcript4990.chr11.nnic	NA	101034315,101093481,101105516	101034451,101093622,101107367	Gene ID= novel_gene_chr11_4991 TPM= 2.12 Transcript Type= NA
chr11	102110376	102111142	102110376	102111142	-	transcript5008.chr11.nnic@NA	transcript5008.chr11.nnic	NA	102110376	102111142	Gene ID= novel_gene_chr11_5009 TPM= 11.68 Transcript Type= NA
chr11	102172478	102174268	102172478	102174268	-	transcript5006.chr11.nnic@NA	transcript5006.chr11.nnic	NA	102172478	102174268	Gene ID= novel_gene_chr11_5007 TPM= 2.12 Transcript Type= NA
chr11	102317486	102322803	102317486	102322803	+	transcript5010.chr11.nic@BIRC3	transcript5010.chr11.nic	protein_coding	102317486,102321837	102317571,102322803	Gene ID= ENSG00000023445.13 TPM= 3.19 Transcript Type= NA
chr11	102347211	102368506	102347211	102368506	+	transcript5016.chr11.nic@BIRC2	transcript5016.chr11.nic	protein_coding	102347211,102348598,102350844,102362896,102363668,102368306	102347376,102350749,102350943,102362974,102363716,102368506	Gene ID= ENSG00000110330.8 TPM= 3.19 Transcript Type= NA
chr11	102347235	102378670	102347235	102378670	+	ENST00000227758.6@BIRC2	ENST00000227758.6	protein_coding	102347235,102348598,102350844,102362896,102363668,102368306,102377496,102377857,102377990	102347376,102350749,102350943,102362974,102363716,102368548,102377750,102377898,102378670	Gene ID= ENSG00000110330.8 TPM= 40.36 Transcript Type= protein_coding
chr11	102396336	102453044	102396336	102453044	-	ENST00000398136.6@TMEM123	ENST00000398136.6	protein_coding	102452524,102448812,102401916,102401539,102396336	102453044,102448868,102402206,102401692,102398891	Gene ID= ENSG00000152558.14 TPM= 63.73 Transcript Type= protein_coding
chr11	103062079	103092215	103062079	103092215	-	ENST00000260247.9@DCUN1D5	ENST00000260247.9	protein_coding	103091787,103089227,103083256,103082748,103066459,103066269,103064275,103062079	103092215,103089318,103083326,103082839,103066567,103066373,103064377,103062414	Gene ID= ENSG00000137692.11 TPM= 41.42 Transcript Type= protein_coding
chr11	103907189	104164379	103907189	104164379	-	ENST00000302251.9@PDGFD	ENST00000302251.9	protein_coding	104163804,104000051,103996065,103947662,103943452,103926912,103907189	104164379,104000237,103996245,103947724,103943650,103927126,103909819	Gene ID= ENSG00000170962.12 TPM= 4.25 Transcript Type= protein_coding
chr11	103907186	104164107	103907186	104164107	-	ENST00000393158.6@PDGFD	ENST00000393158.6	protein_coding	104163804,104000051,103996065,103947662,103943452,103926912,103907186	104164107,104000255,103996245,103947724,103943650,103927126,103909819	Gene ID= ENSG00000170962.12 TPM= 7.44 Transcript Type= protein_coding
chr11	104901553	104918175	104901553	104918175	-	ENST00000527637.5@AP002004.1	ENST00000527637.5	transcribed_unprocessed_pseudogene	104918113,104908835,104905448,104903391,104901553	104918175,104909008,104905557,104903551,104901659	Gene ID= ENSG00000235505.7 TPM= 4.25 Transcript Type= processed_transcript
chr11	104942866	104969436	104942866	104969436	-	ENST00000444739.6@CASP4	ENST00000444739.6	protein_coding	104968519,104954747,104951896,104950925,104949543,104948533,104947083,104944748,104942866	104969436,104955001,104952005,104951098,104949777,104948676,104947192,104944851,104942973	Gene ID= ENSG00000196954.13 TPM= 10.09 Transcript Type= protein_coding
chr11	104942870	104968581	104942870	104968581	-	transcript5047.chr11.nic@CASP4	transcript5047.chr11.nic	protein_coding	104968519,104954747,104951896,104950925,104949543,104948533,104947083,104942870	104968581,104955001,104952005,104951098,104949777,104948676,104947192,104944851	Gene ID= ENSG00000196954.13 TPM= 5.84 Transcript Type= NA
chr11	104942870	104950992	104942870	104950992	-	ENST00000529565.1@CASP4	ENST00000529565.1	protein_coding	104950925,104947083,104942870	104950992,104949777,104944851	Gene ID= ENSG00000196954.13 TPM= 1.06 Transcript Type= retained_intron
chr11	104966074	104968578	104966074	104968578	+	transcript5053.chr11.nnic@NA	transcript5053.chr11.nnic	NA	104966074	104968578	Gene ID= novel_gene_chr11_5054 TPM= 3.19 Transcript Type= NA
chr11	105025508	105035250	105025508	105035250	-	ENST00000436863.7@CASP1	ENST00000436863.7	protein_coding	105035107,105034208,105033064,105031165,105030330,105029665,105029124,105026842,105026226,105025508	105035250,105034474,105033126,105031280,105030503,105029899,105029267,105026951,105026356,105025600	Gene ID= ENSG00000137752.23 TPM= 1.59 Transcript Type= protein_coding
chr11	105025508	105035149	105025508	105035149	-	ENST00000533400.5@CASP1	ENST00000533400.5	protein_coding	105035107,105034208,105033064,105031165,105030330,105029665,105029124,105026842,105025508	105035149,105034474,105033126,105031280,105030503,105029899,105029267,105026951,105026356	Gene ID= ENSG00000137752.23 TPM= 3.72 Transcript Type= protein_coding
chr11	105041523	105045376	105041523	105045376	-	ENST00000375704.7@CARD16	ENST00000375704.7	protein_coding	105045291,105044392,105043483,105041523	105045376,105044658,105043545,105041719	Gene ID= ENSG00000204397.7 TPM= 1.06 Transcript Type= protein_coding
chr11	105998352	106002163	105998352	106002163	-	transcript5063.chr11.nnic@NA	transcript5063.chr11.nnic	NA	105998352	106002163	Gene ID= novel_gene_chr11_5064 TPM= 2.12 Transcript Type= NA
chr11	106007902	106022227	106007902	106022227	-	ENST00000301919.8@MSANTD4	ENST00000301919.8	protein_coding	106020962,106010456,106007902	106022227,106011067,106010110	Gene ID= ENSG00000170903.10 TPM= 6.37 Transcript Type= protein_coding
chr11	106007902	106022229	106007902	106022229	-	transcript5066.chr11.nic@MSANTD4	transcript5066.chr11.nic	protein_coding	106021836,106010456,106007902	106022229,106011067,106010110	Gene ID= ENSG00000170903.10 TPM= 8.5 Transcript Type= NA
chr11	106009984	106022403	106009984	106022403	-	ENST00000530788.1@MSANTD4	ENST00000530788.1	protein_coding	106022195,106010456,106009984	106022403,106011067,106010110	Gene ID= ENSG00000170903.10 TPM= 3.19 Transcript Type= protein_coding
chr11	106052674	106077765	106052674	106077765	-	ENST00000531837.1@KBTBD3	ENST00000531837.1	protein_coding	106077312,106076507,106058865,106052674	106077765,106076707,106059109,106054455	Gene ID= ENSG00000182359.14 TPM= 6.37 Transcript Type= protein_coding
chr11	106051098	106077459	106051098	106077459	-	ENST00000526793.5@KBTBD3	ENST00000526793.5	protein_coding	106077312,106058865,106051098	106077459,106059109,106054455	Gene ID= ENSG00000182359.14 TPM= 2.12 Transcript Type= protein_coding
chr11	106077489	106098710	106077489	106098710	+	ENST00000278618.8@AASDHPPT	ENST00000278618.8	protein_coding	106077489,106079467,106090557,106091316,106094583,106096743	106077893,106079692,106090678,106091477,106094654,106098710	Gene ID= ENSG00000149313.10 TPM= 105.15 Transcript Type= protein_coding
chr11	107326345	107457844	107326345	107457844	-	ENST00000282251.9@CWF19L2	ENST00000282251.9	protein_coding	107457712,107455666,107454450,107442939,107441503,107439090,107433634,107428799,107418194,107416209,107392779,107390074,107353524,107348937,107336558,107334881,107329918,107326345	107457844,107455776,107454572,107443049,107441622,107439183,107433749,107429451,107418287,107416298,107392895,107390211,107353736,107349053,107336713,107334961,107330019,107327053	Gene ID= ENSG00000152404.15 TPM= 7.44 Transcript Type= protein_coding
chr11	107502726	107565746	107502726	107565746	-	ENST00000428149.6@ALKBH8	ENST00000428149.6	protein_coding	107565601,107560765,107556766,107553847,107553108,107551808,107549753,107532300,107525441,107522299,107510887,107502726	107565746,107560899,107557003,107553978,107553203,107551912,107549823,107532406,107525592,107522555,107511036,107505215	Gene ID= ENSG00000137760.14 TPM= 1.06 Transcript Type= protein_coding
chr11	107707378	107719693	107707378	107719693	-	ENST00000531293.1@SLN	ENST00000531293.1	protein_coding	107719616,107711963,107707378	107719693,107712162,107708005	Gene ID= ENSG00000170290.3 TPM= 14.87 Transcript Type= protein_coding
chr11	107707383	107712061	107707383	107712061	-	ENST00000305991.2@SLN	ENST00000305991.2	protein_coding	107711963,107707383	107712061,107708005	Gene ID= ENSG00000170290.3 TPM= 2.12 Transcript Type= protein_coding
chr11	108008733	108107776	108008733	108107776	+	ENST00000393094.6@CUL5	ENST00000393094.6	protein_coding	108008733,108033802,108046270,108049890,108052660,108054647,108054875,108070096,108072332,108073390,108078176,108088527,108089492,108094391,108094812,108095530,108097636,108098406,108104190	108009372,108033911,108046369,108050066,108052801,108054792,108054955,108070189,108072462,108073497,108078240,108088659,108089623,108094514,108094987,108095691,108097754,108098529,108107776	Gene ID= ENSG00000166266.13 TPM= 4.25 Transcript Type= protein_coding
chr11	108121516	108147776	108121516	108147776	+	ENST00000265838.8@ACAT1	ENST00000265838.8	protein_coding	108121516,108131907,108133820,108134221,108135142,108138898,108140065,108141605,108142437,108143983,108146202,108147270	108121678,108131954,108133937,108134316,108135242,108139041,108140215,108141700,108142550,108144047,108146359,108147776	Gene ID= ENSG00000075239.13 TPM= 8.5 Transcript Type= protein_coding
chr11	108157215	108222642	108157215	108222642	-	ENST00000278612.8@NPAT	ENST00000278612.8	protein_coding	108222500,108197302,108193957,108192118,108190460,108189106,108188098,108186482,108185403,108185232,108176994,108176246,108172199,108169928,108169744,108162120,108160880,108157215	108222642,108197420,108194017,108192190,108190500,108189330,108188179,108186569,108185494,108185319,108177090,108176374,108173851,108170043,108169852,108162180,108162014,108159019	Gene ID= ENSG00000149308.16 TPM= 2.12 Transcript Type= protein_coding
chr11	108158793	108170201	108158793	108170201	-	ENST00000530859.1@NPAT	ENST00000530859.1	protein_coding	108169928,108169744,108162120,108160880,108158793	108170201,108169852,108162180,108162014,108159019	Gene ID= ENSG00000149308.16 TPM= 1.06 Transcript Type= retained_intron
chr11	108472112	108498415	108472112	108498415	-	transcript5125.chr11.nic@KDELC2	transcript5125.chr11.nic	protein_coding	108498165,108490970,108486157,108482006,108481180,108477607,108472112	108498415,108491167,108486440,108482222,108481376,108477711,108474952	Gene ID= ENSG00000178202.12 TPM= 3.72 Transcript Type= NA
chr11	108472105	108498432	108472105	108498432	-	ENST00000323468.9@KDELC2	ENST00000323468.9	protein_coding	108498165,108490970,108486157,108482006,108481180,108479301,108477607,108472105	108498432,108491167,108486440,108482222,108481376,108479495,108477711,108474952	Gene ID= ENSG00000178202.12 TPM= 3.72 Transcript Type= protein_coding
chr11	108665025	108940930	108665025	108940930	+	ENST00000322536.7@DDX10	ENST00000322536.7	protein_coding	108665025,108673467,108675596,108677085,108678315,108679371,108688936,108691876,108693516,108706739,108715879,108719797,108722997,108838446,108841315,108852153,108917873,108940246	108665339,108673527,108675726,108677243,108678435,108679560,108689062,108692038,108693600,108706837,108715966,108719885,108723462,108838565,108841476,108852209,108918018,108940930	Gene ID= ENSG00000178105.9 TPM= 5.31 Transcript Type= protein_coding
chr11	110093123	110169040	110093123	110169040	+	transcript5133.chr11.nnic@ZC3H12C	transcript5133.chr11.nnic	protein_coding	110093123,110136663,110152919,110159256,110163273,110164341	110093223,110137414,110153058,110159490,110163379,110169040	Gene ID= ENSG00000149289.10 TPM= 5.31 Transcript Type= NA
chr11	110100214	110103856	110100214	110103856	-	transcript5136.chr11.nnic@NA	transcript5136.chr11.nnic	NA	110100214	110103856	Gene ID= novel_gene_chr11_5137 TPM= 4.25 Transcript Type= NA
chr11	110168978	110171601	110168978	110171601	+	transcript5134.chr11.nnic@NA	transcript5134.chr11.nnic	NA	110168978	110171601	Gene ID= novel_gene_chr11_5135 TPM= 2.12 Transcript Type= NA
chr11	110247813	110296977	110247813	110296977	-	transcript5143.chr11.nic@RDX	transcript5143.chr11.nic	protein_coding	110296467,110279681,110272536,110264779,110263960,110258106,110257767,110255289,110253946,110247813	110296977,110279756,110272619,110264874,110264234,110258189,110257913,110255385,110254109,110247833	Gene ID= ENSG00000137710.14 TPM= 25.49 Transcript Type= NA
chr11	110429883	110464881	110429883	110464881	+	ENST00000260270.2@FDX1	ENST00000260270.2	protein_coding	110429883,110435834,110456918,110462354	110430305,110435958,110457047,110464881	Gene ID= ENSG00000137714.2 TPM= 15.93 Transcript Type= protein_coding
chr11	111540508	111561063	111540508	111561063	+	ENST00000375614.6@LAYN	ENST00000375614.6	protein_coding	111540508,111543923,111549618,111554561,111555207,111557541,111560095	111540928,111544220,111549775,111554593,111555290,111557643,111561063	Gene ID= ENSG00000204381.11 TPM= 1.06 Transcript Type= protein_coding
chr11	111540730	111560918	111540730	111560918	+	ENST00000533265.5@LAYN	ENST00000533265.5	protein_coding	111540730,111543923,111549618,111554561,111555207,111557541,111560095	111540928,111544220,111549775,111554593,111555290,111557647,111560918	Gene ID= ENSG00000204381.11 TPM= 1.06 Transcript Type= protein_coding
chr11	111602391	111730853	111602391	111730853	+	ENST00000304987.3@SIK2	ENST00000304987.3	protein_coding	111602391,111616243,111620339,111688001,111700886,111701452,111703203,111704987,111712211,111719775,111720478,111720899,111721830,111722665,111723496	111602698,111616359,111620402,111688162,111701010,111701575,111703423,111705139,111712375,111720003,111720762,111721062,111721940,111722756,111730853	Gene ID= ENSG00000170145.4 TPM= 8.5 Transcript Type= protein_coding
chr11	111737881	111766427	111737881	111766427	-	ENST00000527614.5@PPP2R1B	ENST00000527614.5	protein_coding	111766248,111765294,111764805,111760819,111759804,111755295,111754980,111754499,111753443,111752159,111747954,111743376,111742523,111742053,111737881	111766427,111765384,111764905,111761051,111759951,111755450,111755094,111754569,111753577,111752332,111748014,111743530,111742665,111742144,111741612	Gene ID= ENSG00000137713.15 TPM= 2.12 Transcript Type= protein_coding
chr11	111726908	111766382	111726908	111766382	-	ENST00000311129.9@PPP2R1B	ENST00000311129.9	protein_coding	111766248,111765294,111764805,111760819,111759804,111755295,111754980,111754499,111753443,111752159,111747954,111743376,111742523,111742053,111737448,111726908	111766382,111765384,111764905,111761051,111759951,111755450,111755094,111754569,111753577,111752332,111748014,111743530,111742665,111742144,111737569,111727057	Gene ID= ENSG00000137713.15 TPM= 9.56 Transcript Type= protein_coding
chr11	111786284	111871581	111786284	111871581	-	ENST00000616540.4@ALG9	ENST00000616540.4	protein_coding	111871352,111870232,111868602,111865181,111860547,111857602,111853649,111853380,111844601,111840655,111838249,111837468,111836165,111809643,111786284	111871581,111870370,111868736,111865251,111860635,111857737,111853736,111853485,111844723,111840809,111838399,111837615,111836294,111809773,111786520	Gene ID= ENSG00000086848.14 TPM= 2.12 Transcript Type= protein_coding
chr11	111786256	111871533	111786256	111871533	-	ENST00000614444.4@ALG9	ENST00000614444.4	protein_coding	111871352,111870232,111868602,111865181,111860547,111857602,111853649,111853380,111844601,111840655,111838249,111837468,111836165,111809643,111786256	111871533,111870370,111868736,111865251,111860635,111857737,111853736,111853485,111844723,111840809,111838378,111837615,111836294,111809773,111786520	Gene ID= ENSG00000086848.14 TPM= 6.37 Transcript Type= protein_coding
chr11	111874056	111879180	111874056	111879180	-	ENST00000260257.8@FDXACB1	ENST00000260257.8	protein_coding	111878961,111878556,111876808,111876481,111874056	111879180,111878712,111877011,111876639,111876104	Gene ID= ENSG00000255561.6 TPM= 1.06 Transcript Type= protein_coding
chr11	111879224	111885975	111879224	111885975	+	ENST00000260276.7@C11orf1	ENST00000260276.7	protein_coding	111879224,111882368,111883136,111883771	111879605,111882598,111883202,111885975	Gene ID= ENSG00000137720.7 TPM= 11.68 Transcript Type= protein_coding
chr11	111878935	111884074	111878935	111884074	+	transcript5192.chr11.nic@C11orf1	transcript5192.chr11.nic	protein_coding	111878935,111882368,111883771	111879040,111882598,111884074	Gene ID= ENSG00000137720.7 TPM= 2.12 Transcript Type= NA
chr11	111908623	111913238	111908623	111913238	-	transcript5195.chr11.nic@CRYAB	transcript5195.chr11.nic	protein_coding	111913139,111911524,111910327,111908623	111913238,111911922,111910449,111908967	Gene ID= ENSG00000109846.7 TPM= 2830.66 Transcript Type= NA
chr11	111908620	111910744	111908620	111910744	-	ENST00000533280.5@CRYAB	ENST00000533280.5	protein_coding	111910671,111910327,111908620	111910744,111910449,111908967	Gene ID= ENSG00000109846.7 TPM= 121.62 Transcript Type= protein_coding
chr11	111908620	111910893	111908620	111910893	-	ENST00000525823.1@CRYAB	ENST00000525823.1	protein_coding	111910327,111908620	111910893,111908967	Gene ID= ENSG00000109846.7 TPM= 40.36 Transcript Type= protein_coding
chr11	111908627	111911816	111908627	111911816	-	transcript5211.chr11.nnic@NA	transcript5211.chr11.nnic	NA	111908627	111911816	Gene ID= novel_gene_chr11_5212 TPM= 47.8 Transcript Type= NA
chr11	111912242	111914093	111912242	111914093	+	ENST00000304298.3@HSPB2	ENST00000304298.3	protein_coding	111912242,111913441	111912923,111914093	Gene ID= ENSG00000170276.5 TPM= 188 Transcript Type= protein_coding
chr11	111977325	112003464	111977325	112003464	+	transcript5221.chr11.nnic@DIXDC1	transcript5221.chr11.nnic	protein_coding	111977325,111980737,111982339,111985232,111986871,111989005,111992415,111992951,111993496,111993669,111995019,111995403,111996080,112002937	111977794,111980849,111982487,111985321,111986924,111989055,111992519,111993004,111993588,111993740,111995108,111995564,111996146,112003464	Gene ID= ENSG00000150764.13 TPM= 3.19 Transcript Type= NA
chr11	111937236	111982448	111937236	111982448	+	transcript5222.chr11.nic@DIXDC1	transcript5222.chr11.nic	protein_coding	111937236,111964549,111968513,111974023,111974876,111980737,111982339	111937559,111964678,111968638,111974254,111974983,111980849,111982448	Gene ID= ENSG00000150764.13 TPM= 2.12 Transcript Type= NA
chr11	111977309	112021979	111977309	112021979	+	ENST00000615255.1@DIXDC1	ENST00000615255.1	protein_coding	111977309,111980737,111982339,111985232,111986871,111989005,111992415,111992951,111993496,111993669,111995019,111995403,111996080,112016691,112017777,112018956	111977794,111980849,111982487,111985321,111986924,111989055,111992519,111993004,111993588,111993740,111995108,111995564,111996146,112016796,112017885,112021979	Gene ID= ENSG00000150764.13 TPM= 7.44 Transcript Type= protein_coding
chr11	112024814	112064390	112024814	112064390	+	ENST00000280346.10@DLAT	ENST00000280346.10	protein_coding	112024814,112026198,112028515,112028792,112033404,112037273,112039244,112043466,112045138,112045863,112051234,112059903,112061038,112062406	112025751,112026299,112028639,112028945,112033530,112037460,112039397,112043533,112045230,112045970,112051349,112060065,112061174,112064390	Gene ID= ENSG00000150768.15 TPM= 22.31 Transcript Type= protein_coding
chr11	112067801	112074171	112067801	112074171	-	ENST00000280350.8@PIH1D2	ENST00000280350.8	protein_coding	112073980,112072998,112071635,112071038,112070436,112067801	112074171,112073205,112071758,112071283,112070701,112068005	Gene ID= ENSG00000150773.10 TPM= 1.06 Transcript Type= protein_coding
chr11	112084817	112086798	112084817	112086798	-	ENST00000541231.1@TIMM8B	ENST00000541231.1	protein_coding	112086640,112084817	112086798,112085462	Gene ID= ENSG00000150779.11 TPM= 96.48 Transcript Type= protein_coding
chr11	112085149	112086722	112085149	112086722	-	ENST00000507614.1@TIMM8B	ENST00000507614.1	protein_coding	112086640,112085967,112085149	112086722,112086310,112085462	Gene ID= ENSG00000150779.11 TPM= 13.63 Transcript Type= processed_transcript
chr11	112084800	112086798	112084800	112086798	-	ENST00000509359.6@TIMM8B	ENST00000509359.6	protein_coding	112086640,112085978,112084800	112086798,112086310,112085462	Gene ID= ENSG00000150779.11 TPM= 9.91 Transcript Type= nonsense_mediated_decay
chr11	112086773	112095794	112086773	112095794	+	ENST00000375549.7@SDHD	ENST00000375549.7	protein_coding	112086773,112087857,112088867,112094805	112086959,112087973,112089011,112095794	Gene ID= ENSG00000204370.9 TPM= 599.06 Transcript Type= protein_coding
chr11	112175467	112218929	112175467	112218929	+	ENST00000357685.9@BCO2	ENST00000357685.9	protein_coding	112175467,112179278,112193474,112193879,112194653,112199699,112200613,112202023,112213724,112214762,112216220,112217761	112175689,112179482,112193697,112193994,112194755,112199827,112200773,112202190,112213861,112214944,112216330,112218929	Gene ID= ENSG00000197580.11 TPM= 22.31 Transcript Type= protein_coding
chr11	112175495	112218135	112175495	112218135	+	transcript5276.chr11.nnic@BCO2	transcript5276.chr11.nnic	protein_coding	112175495,112179278,112193474,112193879,112194653,112200613,112202023,112213724,112214762,112216220,112217761	112175689,112179482,112193697,112193994,112194755,112200773,112202190,112213861,112214944,112216330,112218135	Gene ID= ENSG00000197580.11 TPM= 7.97 Transcript Type= NA
chr11	112175522	112218141	112175522	112218141	+	ENST00000361053.8@BCO2	ENST00000361053.8	protein_coding	112175522,112179278,112193474,112199699,112200613,112202023,112213724,112214762,112216220,112217761	112175689,112179482,112193697,112199827,112200773,112202190,112213861,112214944,112216330,112218141	Gene ID= ENSG00000197580.11 TPM= 10.09 Transcript Type= protein_coding
chr11	112197325	112200343	112197325	112200343	+	transcript5292.chr11.nnic@NA	transcript5292.chr11.nnic	NA	112197325	112200343	Gene ID= novel_gene_chr11_5293 TPM= 2.12 Transcript Type= NA
chr11	112221602	112223718	112221602	112223718	+	transcript5290.chr11.nnic@NA	transcript5290.chr11.nnic	NA	112221602	112223718	Gene ID= novel_gene_chr11_5291 TPM= 3.19 Transcript Type= NA
chr11	112226365	112233810	112226365	112233810	+	transcript5300.chr11.nic@PTS	transcript5300.chr11.nic	protein_coding	112226365,112228594,112233163,112233432	112226526,112230682,112233233,112233810	Gene ID= ENSG00000150787.7 TPM= 2.12 Transcript Type= NA
chr11	112226365	112233973	112226365	112233973	+	ENST00000280362.7@PTS	ENST00000280362.7	protein_coding	112226365,112228594,112230208,112230626,112233163,112233432	112226526,112228673,112230230,112230682,112233233,112233973	Gene ID= ENSG00000150787.7 TPM= 1.06 Transcript Type= protein_coding
chr11	112226432	112233810	112226432	112233810	+	ENST00000525803.1@PTS	ENST00000525803.1	protein_coding	112226432,112228594,112233163,112233432	112226526,112228673,112233233,112233810	Gene ID= ENSG00000150787.7 TPM= 1.06 Transcript Type= protein_coding
chr11	112290223	112294116	112290223	112294116	+	transcript5302.chr11.nic@AP002884.3	transcript5302.chr11.nic	lincRNA	112290223,112291320,112293727	112290509,112292779,112294116	Gene ID= ENSG00000250303.3 TPM= 5.31 Transcript Type= NA
chr11	112290201	112292721	112290201	112292721	+	ENST00000419895.3@AP002884.3	ENST00000419895.3	lincRNA	112290201,112291320	112290509,112292721	Gene ID= ENSG00000250303.3 TPM= 118.96 Transcript Type= lincRNA
chr11	112290274	112291775	112290274	112291775	+	transcript5311.chr11.nnic@AP002884.3	transcript5311.chr11.nnic	lincRNA	112290274,112291320	112290461,112291775	Gene ID= ENSG00000250303.3 TPM= 9.56 Transcript Type= NA
chr11	112290278	112291776	112290278	112291776	+	transcript5313.chr11.nnic@NA	transcript5313.chr11.nnic	NA	112290278	112291776	Gene ID= novel_gene_chr11_5314 TPM= 3.19 Transcript Type= NA
chr11	112961436	113275489	112961436	113275489	+	ENST00000531044.5@NCAM1	ENST00000531044.5	protein_coding	112961436,113202379,113204286,113205523,113206043,113207261,113207833,113214369,113231645,113232170,113232718,113233147,113235033,113246368,113255877,113260146,113270188,113271760,113275267	112961664,113202453,113204504,113205666,113206180,113207378,113208002,113214511,113231795,113232354,113232814,113233317,113235164,113246370,113256001,113260323,113270395,113271876,113275489	Gene ID= ENSG00000149294.16 TPM= 1.74 Transcript Type= protein_coding
chr11	112961368	113265197	112961368	113265197	+	ENST00000621128.4@NCAM1	ENST00000621128.4	protein_coding	112961368,113202379,113204286,113205523,113206043,113207261,113207833,113214369,113231645,113232170,113232718,113233147,113235033,113246368,113255877,113260146,113262846	112961664,113202453,113204504,113205666,113206180,113207378,113208002,113214511,113231795,113232354,113232814,113233317,113235164,113246370,113256001,113260323,113265197	Gene ID= ENSG00000149294.16 TPM= 44.72 Transcript Type= protein_coding
chr11	113273025	113276600	113273025	113276600	+	transcript5372.chr11.nic@NCAM1	transcript5372.chr11.nic	protein_coding	113273025,113275267	113273748,113276600	Gene ID= ENSG00000149294.16 TPM= 7.44 Transcript Type= NA
chr11	113273383	113277876	113273383	113277876	+	transcript5373.chr11.nic@NCAM1	transcript5373.chr11.nic	protein_coding	113273383,113275267	113273748,113277876	Gene ID= ENSG00000149294.16 TPM= 8.5 Transcript Type= NA
chr11	113167527	113168528	113167527	113168528	-	transcript5381.chr11.nnic@NA	transcript5381.chr11.nnic	NA	113167527	113168528	Gene ID= novel_gene_chr11_5382 TPM= 2.12 Transcript Type= NA
chr11	113190314	113193644	113190314	113193644	+	transcript5375.chr11.nnic@NA	transcript5375.chr11.nnic	NA	113190314	113193644	Gene ID= novel_gene_chr11_5376 TPM= 2.12 Transcript Type= NA
chr11	113220751	113225376	113220751	113225376	+	transcript5377.chr11.nnic@NA	transcript5377.chr11.nnic	NA	113220751	113225376	Gene ID= novel_gene_chr11_5378 TPM= 5.31 Transcript Type= NA
chr11	113239501	113245727	113239501	113245727	-	transcript5379.chr11.nnic@NA	transcript5379.chr11.nnic	NA	113239501	113245727	Gene ID= novel_gene_chr11_5380 TPM= 55.23 Transcript Type= NA
chr11	113314570	113366386	113314570	113366386	+	transcript5384.chr11.nic@TTC12	transcript5384.chr11.nic	protein_coding	113314570,113315951,113316243,113323288,113323994,113324605,113325524,113329920,113334966,113338774,113339286,113340664,113341837,113344272,113350073,113351239,113352070,113359363,113359940,113362401,113363828,113364835,113366225	113314618,113316053,113316315,113323451,113324015,113324682,113325645,113329979,113335037,113338834,113339474,113340733,113341925,113344440,113350165,113351299,113352207,113359461,113360008,113362502,113363927,113365060,113366386	Gene ID= ENSG00000149292.16 TPM= 3.19 Transcript Type= NA
chr11	113314529	113366392	113314529	113366392	+	ENST00000529221.5@TTC12	ENST00000529221.5	protein_coding	113314529,113316243,113323288,113323994,113324605,113325524,113329920,113334966,113338774,113339286,113340664,113341837,113344272,113350073,113351239,113352070,113359363,113359940,113362401,113363828,113364835,113366225	113314618,113316315,113323451,113324015,113324682,113325645,113329979,113335037,113338834,113339474,113340733,113341925,113344440,113350165,113351299,113352207,113359461,113360008,113362502,113363927,113365060,113366392	Gene ID= ENSG00000149292.16 TPM= 3.19 Transcript Type= protein_coding
chr11	113733187	113773811	113733187	113773811	-	ENST00000200135.7@ZW10	ENST00000200135.7	protein_coding	113773562,113768833,113760817,113760513,113760209,113758554,113757662,113748257,113747531,113743802,113741694,113739213,113738264,113737572,113736620,113733187	113773811,113768967,113760918,113760590,113760368,113758706,113757853,113748420,113747713,113744040,113741765,113739382,113738394,113737703,113736822,113733814	Gene ID= ENSG00000086827.8 TPM= 12.75 Transcript Type= protein_coding
chr11	113797874	113875570	113797874	113875570	-	transcript5395.chr11.nnic@USP28	transcript5395.chr11.nnic	protein_coding	113875445,113854258,113852501,113841663,113840598,113834249,113833420,113831920,113830867,113829197,113827233,113823605,113817658,113815174,113813885,113812276,113809063,113808298,113807951,113806489,113804868,113804673,113803798,113803158,113801483,113797874	113875570,113854335,113852633,113841768,113840757,113834335,113833557,113831993,113830943,113829345,113827360,113823700,113817837,113815382,113813955,113812504,113809254,113808437,113808136,113806584,113805046,113804751,113803877,113803281,113801678,113799415	Gene ID= ENSG00000048028.11 TPM= 10.44 Transcript Type= NA
chr11	113797874	113875570	113797874	113875570	-	ENST00000003302.8@USP28	ENST00000003302.8	protein_coding	113875445,113854258,113852501,113841663,113840598,113834249,113833420,113831920,113830867,113829197,113827233,113823605,113817658,113815174,113813885,113812276,113809063,113808298,113806489,113804868,113804673,113803798,113803158,113801483,113797874	113875570,113854335,113852633,113841768,113840757,113834335,113833557,113831993,113830943,113829345,113827360,113823700,113817837,113815382,113813955,113812504,113809254,113808437,113806584,113805046,113804751,113803877,113803281,113801678,113799415	Gene ID= ENSG00000048028.11 TPM= 18.41 Transcript Type= protein_coding
chr11	113797874	113875570	113797874	113875570	-	transcript5411.chr11.nic@USP28	transcript5411.chr11.nic	protein_coding	113875445,113841663,113840598,113834249,113833420,113831920,113830867,113829197,113827233,113823605,113817658,113815174,113813885,113812276,113809063,113808298,113806489,113804868,113804673,113803798,113803158,113801483,113797874	113875570,113841768,113840757,113834335,113833557,113831993,113830943,113829345,113827360,113823700,113817837,113815382,113813955,113812504,113809254,113808437,113806584,113805046,113804751,113803877,113803281,113801678,113799415	Gene ID= ENSG00000048028.11 TPM= 7.97 Transcript Type= NA
chr11	113832103	113875570	113832103	113875570	-	transcript5424.chr11.nic@USP28	transcript5424.chr11.nic	protein_coding	113875445,113854258,113852501,113841663,113840598,113834249,113832103	113875570,113854335,113852633,113841768,113840757,113834335,113833557	Gene ID= ENSG00000048028.11 TPM= 2.12 Transcript Type= NA
chr11	113832103	113875538	113832103	113875538	-	transcript5426.chr11.nnic@USP28	transcript5426.chr11.nnic	protein_coding	113875445,113852501,113841663,113840598,113834249,113832103	113875538,113852633,113841768,113840757,113834335,113833557	Gene ID= ENSG00000048028.11 TPM= 3.19 Transcript Type= NA
chr11	113813755	113875528	113813755	113875528	-	ENST00000537706.5@USP28	ENST00000537706.5	protein_coding	113875445,113854258,113852501,113841663,113840598,113834249,113833420,113831920,113830867,113829197,113827233,113823605,113817658,113815174,113813755	113875528,113854335,113852633,113841768,113840757,113834335,113833557,113831993,113830943,113829345,113827360,113823700,113817837,113815382,113813955	Gene ID= ENSG00000048028.11 TPM= 3.54 Transcript Type= protein_coding
chr11	114059886	114250652	114059886	114250652	+	transcript5430.chr11.nic@ZBTB16	transcript5430.chr11.nic	protein_coding	114059886,114063211,114156337,114186952,114242167,114247198,114250326	114060294,114064568,114156434,114187038,114242337,114247365,114250652	Gene ID= ENSG00000109906.13 TPM= 3.19 Transcript Type= NA
chr11	114059593	114250676	114059593	114250676	+	ENST00000335953.8@ZBTB16	ENST00000335953.8	protein_coding	114059593,114063211,114156337,114186952,114242167,114247198,114250326	114059882,114064568,114156434,114187038,114242337,114247365,114250676	Gene ID= ENSG00000109906.13 TPM= 33.99 Transcript Type= protein_coding
chr11	114250940	114254411	114250940	114254411	+	transcript5437.chr11.nnic@NA	transcript5437.chr11.nnic	NA	114250940	114254411	Gene ID= novel_gene_chr11_5438 TPM= 6.37 Transcript Type= NA
chr11	114253616	114255978	114253616	114255978	+	transcript5435.chr11.nnic@NA	transcript5435.chr11.nnic	NA	114253616	114255978	Gene ID= novel_gene_chr11_5436 TPM= 6.37 Transcript Type= NA
chr11	114295825	114312560	114295825	114312560	+	ENST00000299964.3@NNMT	ENST00000299964.3	protein_coding	114295825,114297951,114312045	114296710,114298158,114312560	Gene ID= ENSG00000166741.7 TPM= 36.11 Transcript Type= protein_coding
chr11	114398532	114400511	114398532	114400511	-	ENST00000623205.2@C11orf71	ENST00000623205.2	protein_coding	114398532	114400511	Gene ID= ENSG00000180425.11 TPM= 5.31 Transcript Type= protein_coding
chr11	114400030	114410607	114400030	114410607	+	ENST00000540163.5@RBM7	ENST00000540163.5	protein_coding	114400030,114401698,114402828,114405709,114407445	114400767,114401860,114402915,114405799,114410607	Gene ID= ENSG00000076053.10 TPM= 6.37 Transcript Type= protein_coding
chr11	114400666	114408909	114400666	114408909	+	ENST00000542140.5@RBM7	ENST00000542140.5	protein_coding	114400666,114401698,114402832,114405706,114407445	114400767,114401860,114402915,114405799,114408909	Gene ID= ENSG00000076053.10 TPM= 1.06 Transcript Type= nonsense_mediated_decay
chr11	114439386	114450279	114439386	114450279	+	ENST00000265881.9@REXO2	ENST00000265881.9	protein_coding	114439386,114440656,114443856,114444541,114445979,114447826,114449846	114439675,114440739,114443933,114444652,114446087,114447879,114450279	Gene ID= ENSG00000076043.9 TPM= 225.18 Transcript Type= protein_coding
chr11	114443275	114445253	114443275	114445253	-	transcript5471.chr11.nnic@NA	transcript5471.chr11.nnic	NA	114443275	114445253	Gene ID= novel_gene_chr11_5472 TPM= 14.87 Transcript Type= NA
chr11	114475228	114479115	114475228	114479115	-	transcript5473.chr11.nnic@NA	transcript5473.chr11.nnic	NA	114475228	114479115	Gene ID= novel_gene_chr11_5474 TPM= 3.19 Transcript Type= NA
chr11	115176295	115504565	115176295	115504565	-	ENST00000331581.10@CADM1	ENST00000331581.10	protein_coding	115504271,115240274,115238500,115231353,115229113,115217892,115214608,115209574,115198406,115190888,115178644,115176295	115504565,115240420,115238652,115231490,115229271,115217991,115214780,115209657,115198438,115190941,115178775,115176592	Gene ID= ENSG00000182985.17 TPM= 1.06 Transcript Type= protein_coding
chr11	115174307	115504415	115174307	115504415	-	ENST00000536727.5@CADM1	ENST00000536727.5	protein_coding	115504271,115240274,115238500,115231353,115229113,115217892,115214608,115198406,115190888,115178644,115174307	115504415,115240420,115238652,115231490,115229271,115217991,115214780,115198438,115190941,115178775,115176592	Gene ID= ENSG00000182985.17 TPM= 1.06 Transcript Type= protein_coding
chr11	115169236	115504415	115169236	115504415	-	ENST00000452722.7@CADM1	ENST00000452722.7	protein_coding	115504271,115240274,115238500,115231353,115229113,115217892,115214608,115209574,115178644,115169236	115504415,115240420,115238652,115231490,115229271,115217991,115214780,115209657,115178775,115176592	Gene ID= ENSG00000182985.17 TPM= 5.31 Transcript Type= protein_coding
chr11	115173625	115504523	115173625	115504523	-	ENST00000542447.6@CADM1	ENST00000542447.6	protein_coding	115504271,115240274,115238500,115231353,115229113,115217892,115214608,115178644,115173625	115504523,115240420,115238652,115231490,115229271,115217991,115214780,115178775,115176592	Gene ID= ENSG00000182985.17 TPM= 9.56 Transcript Type= protein_coding
chr11	115176330	115194110	115176330	115194110	-	ENST00000543375.5@CADM1	ENST00000543375.5	protein_coding	115193838,115178644,115176330	115194110,115178775,115176592	Gene ID= ENSG00000182985.17 TPM= 1.06 Transcript Type= processed_transcript
chr11	115260685	115262102	115260685	115262102	-	transcript5494.chr11.nnic@NA	transcript5494.chr11.nnic	NA	115260685	115262102	Gene ID= novel_gene_chr11_5495 TPM= 2.12 Transcript Type= NA
chr11	115500876	115502636	115500876	115502636	+	transcript5496.chr11.nnic@NA	transcript5496.chr11.nnic	NA	115500876	115502636	Gene ID= novel_gene_chr11_5497 TPM= 2.12 Transcript Type= NA
chr11	116748170	116772988	116748170	116772988	-	ENST00000260210.4@BUD13	ENST00000260210.4	protein_coding	116772822,116770129,116765362,116762553,116760735,116759074,116758269,116757766,116757146,116748170	116772988,116770222,116765446,116763266,116760952,116759179,116758407,116757950,116757227,116748575	Gene ID= ENSG00000137656.11 TPM= 11.68 Transcript Type= protein_coding
chr11	116756410	116757364	116756410	116757364	+	transcript5501.chr11.nnic@NA	transcript5501.chr11.nnic	NA	116756410	116757364	Gene ID= novel_gene_chr11_5502 TPM= 2.12 Transcript Type= NA
chr11	116835751	116837950	116835751	116837950	-	ENST00000236850.4@APOA1	ENST00000236850.4	protein_coding	116837605,116837345,116837001,116835751	116837950,116837407,116837157,116836411	Gene ID= ENSG00000118137.9 TPM= 21.06 Transcript Type= protein_coding
chr11	116835751	116837614	116835751	116837614	-	ENST00000375323.5@APOA1	ENST00000375323.5	protein_coding	116837345,116837001,116835751	116837614,116837157,116836411	Gene ID= ENSG00000118137.9 TPM= 12.57 Transcript Type= protein_coding
chr11	116835751	116837610	116835751	116837610	-	ENST00000375329.6@APOA1	ENST00000375329.6	protein_coding	116837345,116835751	116837610,116836411	Gene ID= ENSG00000118137.9 TPM= 2.66 Transcript Type= protein_coding
chr11	116835751	116837609	116835751	116837609	-	ENST00000359492.6@APOA1	ENST00000359492.6	protein_coding	116837559,116837345,116837001,116835751	116837609,116837407,116837157,116836411	Gene ID= ENSG00000118137.9 TPM= 12.57 Transcript Type= protein_coding
chr11	116869525	117098453	116869525	117098453	-	transcript5514.chr11.nic@SIK3	transcript5514.chr11.nic	protein_coding	117098143,116956948,116954044,116927219,116897193,116896253,116876924,116876253,116875866,116875374,116875158,116873903,116873481,116869525	117098453,116957064,116954107,116927380,116897317,116896376,116877042,116876363,116876009,116875451,116875267,116874056,116873636,116870401	Gene ID= ENSG00000160584.15 TPM= 5.31 Transcript Type= NA
chr11	117144267	117171048	117144267	117171048	+	ENST00000527958.5@PAFAH1B2	ENST00000527958.5	protein_coding	117144267,117152441,117159934,117161145,117163770,117167421	117144418,117152528,117160023,117161261,117163892,117171048	Gene ID= ENSG00000168092.13 TPM= 202.87 Transcript Type= protein_coding
chr11	117199394	117204782	117199394	117204782	+	ENST00000278968.10@TAGLN	ENST00000278968.10	protein_coding	117199394,117203002,117203307,117203782,117204215	117199829,117203193,117203484,117203884,117204782	Gene ID= ENSG00000149591.16 TPM= 41.42 Transcript Type= protein_coding
chr11	117205074	117207041	117205074	117207041	-	transcript5566.chr11.nnic@PCSK7	transcript5566.chr11.nnic	protein_coding	117206880,117206681,117205074	117207041,117206798,117206356	Gene ID= ENSG00000160613.12 TPM= 14.87 Transcript Type= NA
chr11	117232736	117285688	117232736	117285688	+	ENST00000531452.5@RNF214	ENST00000531452.5	protein_coding	117232736,117234267,117238601,117239801,117244445,117246809,117279908,117280171,117281314,117281600,117281894,117282404,117282746,117283115,117285086	117232775,117234379,117239111,117239860,117244585,117246948,117280004,117280259,117281404,117281698,117282270,117282536,117282850,117283210,117285688	Gene ID= ENSG00000167257.10 TPM= 2.12 Transcript Type= protein_coding
chr11	117292183	117293093	117292183	117293093	-	transcript5574.chr11.nnic@NA	transcript5574.chr11.nnic	NA	117292183	117293093	Gene ID= novel_gene_chr11_5575 TPM= 26.55 Transcript Type= NA
chr11	117328085	117351959	117328085	117351959	+	ENST00000527609.5@CEP164	ENST00000527609.5	protein_coding	117328085,117335605,117338566,117344166,117351790	117328208,117335680,117338668,117344277,117351959	Gene ID= ENSG00000110274.15 TPM= 1.06 Transcript Type= protein_coding
chr11	117986348	118001479	117986348	118001479	+	ENST00000227752.7@IL10RA	ENST00000227752.7	protein_coding	117986348,117988382,117989442,117993241,117993999,117995589,117998715	117986534,117988502,117989620,117993410,117994149,117995710,118001479	Gene ID= ENSG00000110324.10 TPM= 1.06 Transcript Type= protein_coding
chr11	118134616	118136994	118134616	118136994	-	transcript5590.chr11.nnic@NA	transcript5590.chr11.nnic	NA	118134616	118136994	Gene ID= novel_gene_chr11_5591 TPM= 3.19 Transcript Type= NA
chr11	118161951	118176673	118161951	118176673	-	ENST00000278947.5@SCN2B	ENST00000278947.5	protein_coding	118176362,118168585,118168085,118161951	118176673,118168751,118168295,118167086	Gene ID= ENSG00000149575.5 TPM= 11.68 Transcript Type= protein_coding
chr11	118256911	118264536	118256911	118264536	-	ENST00000438295.2@MPZL2	ENST00000438295.2	protein_coding	118264096,118262931,118262438,118260054,118256911	118264536,118263097,118262648,118260201,118257313	Gene ID= ENSG00000149573.8 TPM= 1.06 Transcript Type= protein_coding
chr11	118253403	118264282	118253403	118264282	-	ENST00000278937.6@MPZL2	ENST00000278937.6	protein_coding	118264096,118262931,118262438,118260054,118257238,118253403	118264282,118263097,118262648,118260201,118257313,118255233	Gene ID= ENSG00000149573.8 TPM= 11.68 Transcript Type= protein_coding
chr11	118359585	118399211	118359585	118399211	+	ENST00000252108.7@UBE4A	ENST00000252108.7	protein_coding	118359585,118365040,118368631,118369423,118371514,118372507,118373086,118373494,118374896,118376574,118379446,118381391,118382589,118384635,118384832,118386438,118389725,118390657,118392738,118396314	118359674,118365201,118368804,118369535,118371666,118372666,118373288,118373685,118375229,118376694,118379750,118381523,118382776,118384735,118384945,118386612,118389905,118390804,118392895,118399211	Gene ID= ENSG00000110344.9 TPM= 68.51 Transcript Type= protein_coding
chr11	118359596	118374858	118359596	118374858	+	transcript5613.chr11.nic@UBE4A	transcript5613.chr11.nic	protein_coding	118359596,118365040,118368631,118369423,118371514,118372507,118373086,118373494	118359674,118365201,118368804,118369535,118371666,118372666,118373288,118374858	Gene ID= ENSG00000110344.9 TPM= 2.66 Transcript Type= NA
chr11	118401610	118409577	118401610	118409577	+	ENST00000529790.5@ATP5L	ENST00000529790.5	protein_coding	118401610,118405657,118406937,118409000	118401717,118405709,118407097,118409577	Gene ID= ENSG00000167283.7 TPM= 1.41 Transcript Type= retained_intron
chr11	118401154	118409851	118401154	118409851	+	ENST00000300688.7@ATP5L	ENST00000300688.7	protein_coding	118401154,118406937,118409000	118401717,118407097,118409851	Gene ID= ENSG00000167283.7 TPM= 838.4 Transcript Type= protein_coding
chr11	118401633	118409199	118401633	118409199	+	ENST00000529460.1@ATP5L	ENST00000529460.1	protein_coding	118401633,118406937,118409000	118401728,118407097,118409199	Gene ID= ENSG00000167283.7 TPM= 763.51 Transcript Type= processed_transcript
chr11	118401622	118409199	118401622	118409199	+	ENST00000533172.5@ATP5L	ENST00000533172.5	protein_coding	118401622,118406937,118409000	118401717,118406976,118409199	Gene ID= ENSG00000167283.7 TPM= 10.09 Transcript Type= processed_transcript
chr11	118436490	118526832	118436490	118526832	+	ENST00000534358.5@KMT2A	ENST00000534358.5	protein_coding	118436490,118468775,118471662,118476805,118477967,118480174,118481715,118482422,118484183,118484862,118488614,118489792,118490129,118491196,118491744,118493057,118494288,118494694,118495700,118496261,118497936,118498370,118499303,118499835,118500987,118501672,118502398,118507529,118509136,118509948,118511951,118519618,118519957,118520802,118521288,118521897	118436944,118468844,118474315,118476982,118478201,118480238,118482092,118482495,118484314,118484975,118488760,118489887,118490249,118491318,118491928,118493230,118494398,118494767,118495893,118496367,118498073,118498528,118499420,118499913,118501147,118501857,118506646,118507609,118509200,118510118,118512025,118519792,118520064,118520885,118521417,118526832	Gene ID= ENSG00000118058.20 TPM= 31.86 Transcript Type= protein_coding
chr11	118436481	118472794	118436481	118472794	+	transcript5631.chr11.nic@KMT2A	transcript5631.chr11.nic	protein_coding	118436481,118468775,118471662	118436944,118468844,118472794	Gene ID= ENSG00000118058.20 TPM= 2.12 Transcript Type= NA
chr11	118531209	118535835	118531209	118535835	+	ENST00000313236.9@TMEM25	ENST00000313236.9	protein_coding	118531209,118531775,118532150,118532917,118533420,118533857,118534029,118534266,118534507	118531234,118531871,118532461,118533207,118533551,118533887,118534129,118534355,118535835	Gene ID= ENSG00000149582.15 TPM= 8.5 Transcript Type= protein_coding
chr11	118544528	118566076	118544528	118566076	-	ENST00000264021.7@IFT46	ENST00000264021.7	protein_coding	118565790,118564965,118559785,118556906,118555248,118554990,118554459,118552214,118551786,118545793,118545409,118544528	118566076,118565061,118559864,118557045,118555322,118555083,118554587,118552335,118551852,118545853,118545494,118545011	Gene ID= ENSG00000118096.7 TPM= 16.99 Transcript Type= protein_coding
chr11	118544543	118566033	118544543	118566033	-	transcript5642.chr11.nnic@IFT46	transcript5642.chr11.nnic	protein_coding	118565790,118559785,118556906,118555248,118554990,118554459,118552214,118551786,118545793,118545409,118544543	118566033,118559864,118557045,118555322,118555083,118554587,118552335,118551852,118545853,118545494,118545011	Gene ID= ENSG00000118096.7 TPM= 5.31 Transcript Type= NA
chr11	118544543	118566035	118544543	118566035	-	ENST00000264020.6@IFT46	ENST00000264020.6	protein_coding	118565790,118564965,118559785,118557738,118556906,118555248,118554990,118554459,118552214,118551786,118545793,118545409,118544543	118566035,118565061,118559864,118557890,118557045,118555322,118555083,118554587,118552335,118551852,118545853,118545494,118545011	Gene ID= ENSG00000118096.7 TPM= 6.37 Transcript Type= protein_coding
chr11	118572393	118590364	118572393	118590364	+	transcript5652.chr11.nic@ARCN1	transcript5652.chr11.nic	protein_coding	118572393,118581246,118583179,118583809,118584480,118590341	118572550,118581509,118583358,118584014,118584644,118590364	Gene ID= ENSG00000095139.13 TPM= 2.12 Transcript Type= NA
chr11	118572453	118602928	118572453	118602928	+	ENST00000264028.4@ARCN1	ENST00000264028.4	protein_coding	118572453,118581246,118583179,118583809,118584480,118590341,118592709,118593590,118597707,118600625	118572550,118581509,118583358,118584014,118584644,118590506,118592856,118593698,118597911,118602928	Gene ID= ENSG00000095139.13 TPM= 62.67 Transcript Type= protein_coding
chr11	118621456	118658025	118621456	118658025	+	transcript5656.chr11.nnic@PHLDB1	transcript5656.chr11.nnic	protein_coding	118621456,118624934,118627305,118631207,118631913,118632159,118635393,118638891,118639162,118641614,118642254,118643800,118644072,118645356,118645735,118647930,118650077,118650445,118655605,118656683	118621538,118625059,118628650,118631479,118632053,118632296,118635548,118639001,118639251,118641784,118642394,118643940,118644174,118645650,118645825,118648076,118650193,118650547,118655690,118658025	Gene ID= ENSG00000019144.18 TPM= 114.71 Transcript Type= NA
chr11	118630029	118634378	118630029	118634378	+	transcript5670.chr11.nnic@PHLDB1	transcript5670.chr11.nnic	protein_coding	118630029,118631018,118631913	118630872,118631479,118634378	Gene ID= ENSG00000019144.18 TPM= 7.44 Transcript Type= NA
chr11	118662964	118665121	118662964	118665121	+	transcript5672.chr11.nnic@NA	transcript5672.chr11.nnic	NA	118662964	118665121	Gene ID= novel_gene_chr11_5673 TPM= 2.12 Transcript Type= NA
chr11	118749912	118790989	118749912	118790989	-	transcript5674.chr11.nnic@DDX6	transcript5674.chr11.nnic	protein_coding	118790887,118786052,118781121,118779632,118768223,118765209,118763212,118759922,118758774,118757171,118756260,118755402,118754705,118749912	118790989,118786518,118781184,118779736,118768352,118765355,118763306,118760044,118758902,118757287,118756323,118755503,118754887,118752097	Gene ID= ENSG00000110367.11 TPM= 16.99 Transcript Type= NA
chr11	118776049	118777912	118776049	118777912	+	transcript5684.chr11.nnic@NA	transcript5684.chr11.nnic	NA	118776049	118777912	Gene ID= novel_gene_chr11_5685 TPM= 5.31 Transcript Type= NA
chr11	118782838	118783822	118782838	118783822	+	transcript5680.chr11.nnic@NA	transcript5680.chr11.nnic	NA	118782838	118783822	Gene ID= novel_gene_chr11_5681 TPM= 6.37 Transcript Type= NA
chr11	118791254	118793137	118791254	118793137	+	ENST00000610705.1@AP004609.3	ENST00000610705.1	lincRNA	118791254	118793137	Gene ID= ENSG00000278376.1 TPM= 1.06 Transcript Type= lincRNA
chr11	118893875	118910904	118893875	118910904	-	ENST00000334801.7@BCL9L	ENST00000334801.7	protein_coding	118909914,118908270,118907483,118903236,118902990,118900619,118899917,118893875	118910904,118908655,118907602,118903452,118903074,118902908,118900198,118899508	Gene ID= ENSG00000186174.12 TPM= 19.12 Transcript Type= protein_coding
chr11	118998133	119015745	118998133	119015745	+	transcript5696.chr11.nic@CCDC84	transcript5696.chr11.nic	protein_coding	118998133,118998430,118999011,119010764,119011221,119011939,119012149,119013232,119014994,119015307,119015538	118998317,118998593,118999109,119010830,119011311,119012003,119012254,119013262,119015083,119015439,119015745	Gene ID= ENSG00000186166.8 TPM= 3.19 Transcript Type= NA
chr11	118998142	119015745	118998142	119015745	+	ENST00000334418.5@CCDC84	ENST00000334418.5	protein_coding	118998142,118998430,118999011,119010764,119011221,119011939,119012149,119013232,119014994,119015307,119015538	118998317,118998593,118999109,119010830,119011283,119012003,119012254,119013262,119015083,119015439,119015745	Gene ID= ENSG00000186166.8 TPM= 16.99 Transcript Type= protein_coding
chr11	119006240	119009119	119006240	119009119	-	transcript5707.chr11.nnic@NA	transcript5707.chr11.nnic	NA	119006240	119009119	Gene ID= novel_gene_chr11_5708 TPM= 4.25 Transcript Type= NA
chr11	119015712	119018678	119015712	119018678	-	ENST00000527791.5@RPS25	ENST00000527791.5	protein_coding	119018282,119017958,119017362,119015841,119015712	119018678,119018053,119017433,119015939,119015758	Gene ID= ENSG00000118181.10 TPM= 8.5 Transcript Type= nonsense_mediated_decay
chr11	119015712	119018690	119015712	119018690	-	ENST00000527673.1@RPS25	ENST00000527673.1	protein_coding	119018282,119017958,119017362,119015841,119015712	119018690,119018053,119017545,119015939,119015758	Gene ID= ENSG00000118181.10 TPM= 602.25 Transcript Type= protein_coding
chr11	119015713	119017520	119015713	119017520	-	transcript5709.chr11.nnic@NA	transcript5709.chr11.nnic	NA	119015713	119017520	Gene ID= novel_gene_chr11_5710 TPM= 4.25 Transcript Type= NA
chr11	119018432	119024134	119018432	119024134	+	ENST00000533632.5@TRAPPC4	ENST00000533632.5	protein_coding	119018432,119019143,119020150,119021760,119023321	119018970,119019317,119020253,119021886,119024134	Gene ID= ENSG00000196655.11 TPM= 40.36 Transcript Type= protein_coding
chr11	119024356	119030912	119024356	119030912	-	transcript5713.chr11.nic@SLC37A4	transcript5713.chr11.nic	protein_coding	119030849,119029222,119028194,119027628,119026937,119026603,119025967,119025692,119025191,119024356	119030912,119029564,119028426,119027872,119027095,119026688,119026080,119025757,119025329,119025076	Gene ID= ENSG00000137700.17 TPM= 8.5 Transcript Type= NA
chr11	119044189	119057155	119044189	119057155	-	transcript5715.chr11.nic@HYOU1	transcript5715.chr11.nic	protein_coding	119057075,119056070,119055750,119055493,119055185,119054984,119054494,119054121,119052637,119052295,119052090,119051819,119051438,119051035,119049777,119049556,119049018,119048714,119048476,119048248,119047947,119047734,119046562,119046417,119045781,119044189	119057155,119056167,119055843,119055571,119055339,119055060,119054675,119054236,119052829,119052429,119052172,119051951,119051625,119051173,119049837,119049635,119049203,119048886,119048563,119048370,119048080,119047818,119046802,119046467,119045831,119045654	Gene ID= ENSG00000149428.18 TPM= 14.87 Transcript Type= NA
chr11	119044189	119057220	119044189	119057220	-	transcript5716.chr11.nic@HYOU1	transcript5716.chr11.nic	protein_coding	119057153,119056070,119055750,119055493,119055185,119054984,119054494,119054121,119052637,119052295,119052090,119051819,119051438,119051035,119049777,119049556,119049018,119048714,119048476,119048248,119047947,119047734,119046562,119046417,119045781,119044189	119057220,119056167,119055843,119055571,119055339,119055060,119054675,119054236,119052829,119052429,119052172,119051951,119051625,119051173,119049837,119049635,119049203,119048886,119048563,119048370,119048080,119047818,119046802,119046467,119045831,119045654	Gene ID= ENSG00000149428.18 TPM= 15.93 Transcript Type= NA
chr11	119044189	119057137	119044189	119057137	-	ENST00000617285.4@HYOU1	ENST00000617285.4	protein_coding	119057020,119056070,119055750,119055493,119055185,119054984,119054494,119054121,119052637,119052295,119052090,119051819,119051438,119051035,119049777,119049556,119049018,119048714,119048476,119048248,119047947,119047734,119046562,119046417,119045781,119044189	119057137,119056167,119055843,119055571,119055339,119055060,119054675,119054236,119052829,119052429,119052172,119051951,119051625,119051173,119049837,119049635,119049203,119048886,119048563,119048370,119048080,119047818,119046802,119046467,119045831,119045654	Gene ID= ENSG00000149428.18 TPM= 54.17 Transcript Type= protein_coding
chr11	119067692	119081978	119067692	119081978	+	ENST00000621676.4@VPS11	ENST00000621676.4	protein_coding	119067692,119069196,119069442,119070234,119071596,119073198,119073800,119076897,119077501,119077878,119078173,119078565,119078795,119079129,119081092,119081459	119068010,119069344,119069577,119070397,119071843,119073399,119073951,119077083,119077647,119078066,119078334,119078704,119078997,119079300,119081314,119081978	Gene ID= ENSG00000160695.14 TPM= 27.62 Transcript Type= protein_coding
chr11	119087987	119093549	119087987	119093549	+	ENST00000392841.1@HMBS	ENST00000392841.1	protein_coding	119087987,119088255,119088635,119089082,119089217,119089683,119089990,119090190,119091413,119092125,119092404,119092758,119092935,119093110	119088078,119088308,119088707,119089131,119089272,119089760,119090067,119090265,119091526,119092163,119092523,119092811,119093021,119093549	Gene ID= ENSG00000256269.7 TPM= 1.59 Transcript Type= protein_coding
chr11	119084883	119093547	119084883	119093547	+	ENST00000278715.7@HMBS	ENST00000278715.7	protein_coding	119084883,119088255,119088635,119089082,119089217,119089683,119089990,119090190,119091413,119092125,119092404,119092758,119092935,119093110	119085066,119088308,119088707,119089131,119089272,119089760,119090067,119090265,119091526,119092163,119092523,119092811,119093021,119093547	Gene ID= ENSG00000256269.7 TPM= 21.77 Transcript Type= protein_coding
chr11	119084885	119093516	119084885	119093516	+	ENST00000537841.5@HMBS	ENST00000537841.5	protein_coding	119084885,119088255,119088635,119089082,119089217,119089683,119089990,119090190,119091413,119092125,119092404,119092758,119092935,119093110	119085157,119088308,119088707,119089131,119089272,119089760,119090067,119090265,119091526,119092163,119092523,119092811,119093021,119093516	Gene ID= ENSG00000256269.7 TPM= 1.06 Transcript Type= protein_coding
chr11	119093879	119095449	119093879	119095449	-	ENST00000375167.1@H2AFX	ENST00000375167.1	protein_coding	119094460,119093879	119095449,119094261	Gene ID= ENSG00000188486.3 TPM= 5.31 Transcript Type= nonsense_mediated_decay
chr11	119093854	119095467	119093854	119095467	-	ENST00000530167.1@H2AFX	ENST00000530167.1	protein_coding	119093854	119095467	Gene ID= ENSG00000188486.3 TPM= 18.06 Transcript Type= protein_coding
chr11	119096507	119102142	119096507	119102142	-	ENST00000354202.8@DPAGT1	ENST00000354202.8	protein_coding	119101495,119101018,119100630,119100262,119098403,119097855,119097464,119097142,119096507	119102142,119101138,119100843,119100408,119098487,119098043,119097551,119097297,119097063	Gene ID= ENSG00000172269.18 TPM= 12.75 Transcript Type= protein_coding
chr11	119096510	119101878	119096510	119101878	-	ENST00000392834.7@DPAGT1	ENST00000392834.7	protein_coding	119101495,119100630,119100262,119098403,119097855,119097464,119097142,119096510	119101878,119100843,119100408,119098487,119098043,119097551,119097297,119097063	Gene ID= ENSG00000172269.18 TPM= 2.12 Transcript Type= nonsense_mediated_decay
chr11	119107383	119118544	119107383	119118544	+	ENST00000336702.7@C2CD2L	ENST00000336702.7	protein_coding	119107383,119110104,119110561,119110847,119111052,119111263,119111521,119112328,119112482,119112700,119113611,119113852,119114080,119116045	119108095,119110199,119110680,119110957,119111168,119111374,119111629,119112392,119112609,119112874,119113712,119113988,119114365,119118544	Gene ID= ENSG00000172375.12 TPM= 5.31 Transcript Type= protein_coding
chr11	119111057	119117121	119111057	119117121	+	ENST00000528586.1@C2CD2L	ENST00000528586.1	protein_coding	119111057,119111263,119111521,119112328,119112482,119112700,119113611,119113855,119114080,119116025	119111168,119111374,119111629,119112392,119112609,119112874,119113712,119113988,119114365,119117121	Gene ID= ENSG00000172375.12 TPM= 7.44 Transcript Type= protein_coding
chr11	119121587	119136044	119121587	119136044	+	ENST00000350777.6@HINFP	ENST00000350777.6	protein_coding	119121587,119126935,119130725,119131535,119131830,119132496,119132661,119132864,119133095,119134084	119121639,119127125,119130954,119131646,119131982,119132573,119132781,119133002,119133219,119136044	Gene ID= ENSG00000172273.12 TPM= 1.06 Transcript Type= protein_coding
chr11	119149012	119162653	119149012	119162653	+	ENST00000619701.4@ABCG4	ENST00000619701.4	protein_coding	119149012,119149954,119154026,119154260,119154525,119154770,119156329,119156564,119156872,119158234,119158557,119158829,119160227,119160538,119160881	119149363,119150203,119154143,119154392,119154575,119154915,119156452,119156678,119157014,119158332,119158725,119158929,119160385,119160656,119162653	Gene ID= ENSG00000172350.9 TPM= 2.12 Transcript Type= protein_coding
chr11	119168722	119184016	119168722	119184016	+	transcript5754.chr11.nic@NLRX1	transcript5754.chr11.nic	protein_coding	119168722,119171356,119172356,119172901,119173479,119174453,119179693,119181171,119182094,119183118	119169042,119171473,119172425,119172989,119174098,119175274,119180288,119181257,119182345,119184016	Gene ID= ENSG00000160703.15 TPM= 31.31 Transcript Type= NA
chr11	119168722	119184016	119168722	119184016	+	transcript5755.chr11.nic@NLRX1	transcript5755.chr11.nic	protein_coding	119168722,119171356,119172356,119172901,119173479,119174453,119179693,119181171,119182094,119183821	119169042,119171473,119172425,119172989,119174098,119175274,119180288,119181257,119182345,119184016	Gene ID= ENSG00000160703.15 TPM= 2.55 Transcript Type= NA
chr11	119168729	119184014	119168729	119184014	+	ENST00000292199.6@NLRX1	ENST00000292199.6	protein_coding	119168729,119171356,119172356,119172901,119173479,119174453,119179693,119181171,119182094,119183118	119168921,119171473,119172425,119172989,119174098,119175274,119180288,119181257,119182345,119184014	Gene ID= ENSG00000160703.15 TPM= 11.13 Transcript Type= protein_coding
chr11	119168728	119184012	119168728	119184012	+	ENST00000409991.5@NLRX1	ENST00000409991.5	protein_coding	119168728,119171356,119172356,119172901,119173479,119174453,119179693,119181171,119182094,119183118	119168894,119171473,119172425,119172989,119174098,119175274,119180288,119181257,119182345,119184012	Gene ID= ENSG00000160703.15 TPM= 17.15 Transcript Type= protein_coding
chr11	119168764	119184016	119168764	119184016	+	ENST00000409109.5@NLRX1	ENST00000409109.5	protein_coding	119168764,119171356,119172356,119172901,119173479,119174453,119179693,119181171,119182094,119183118	119169302,119171473,119172425,119172989,119174098,119175274,119180288,119181257,119182345,119184016	Gene ID= ENSG00000160703.15 TPM= 17.5 Transcript Type= protein_coding
chr11	119206276	119308149	119206276	119308149	+	ENST00000264033.5@CBL	ENST00000264033.5	protein_coding	119206276,119232448,119271735,119273868,119274832,119275997,119277757,119278166,119278510,119284969,119285189,119287852,119296918,119297384,119298358,119299495	119206612,119232695,119271881,119274024,119274953,119276134,119277844,119278297,119278713,119285100,119285566,119287946,119297034,119297481,119298540,119308149	Gene ID= ENSG00000110395.6 TPM= 2.12 Transcript Type= protein_coding
chr11	119206297	119274733	119206297	119274733	+	transcript5763.chr11.nic@CBL	transcript5763.chr11.nic	protein_coding	119206297,119232448,119271735,119273868	119206612,119232695,119271881,119274733	Gene ID= ENSG00000110395.6 TPM= 4.25 Transcript Type= NA
chr11	119304723	119306952	119304723	119306952	+	transcript5765.chr11.nnic@NA	transcript5765.chr11.nnic	NA	119304723	119306952	Gene ID= novel_gene_chr11_5766 TPM= 4.25 Transcript Type= NA
chr11	119308529	119317161	119308529	119317161	-	transcript5776.chr11.nnic@MCAM	transcript5776.chr11.nnic	protein_coding	119317035,119315139,119314833,119314679,119314489,119312770,119312527,119312266,119312052,119311808,119311530,119311280,119310756,119310349,119308529	119317161,119315263,119315040,119314749,119314576,119312949,119312648,119312428,119312170,119311949,119311651,119311421,119310903,119310466,119309915	Gene ID= ENSG00000076706.16 TPM= 20.18 Transcript Type= NA
chr11	119308534	119317125	119308534	119317125	-	transcript5777.chr11.nic@MCAM	transcript5777.chr11.nic	protein_coding	119317035,119315139,119314833,119314679,119314489,119312770,119312527,119312266,119312052,119311808,119311530,119311280,119311090,119310756,119308534	119317125,119315263,119315040,119314749,119314576,119312949,119312648,119312428,119312170,119311949,119311651,119311421,119311185,119310903,119309915	Gene ID= ENSG00000076706.16 TPM= 4.25 Transcript Type= NA
chr11	119308529	119317116	119308529	119317116	-	ENST00000264036.5@MCAM	ENST00000264036.5	protein_coding	119317035,119315139,119314833,119314679,119314489,119312770,119312527,119312266,119312052,119311808,119311530,119311280,119311090,119310756,119310349,119308529	119317116,119315263,119315040,119314749,119314576,119312949,119312648,119312428,119312170,119311949,119311651,119311421,119311185,119310903,119310466,119309915	Gene ID= ENSG00000076706.16 TPM= 93.47 Transcript Type= protein_coding
chr11	119334527	119337313	119334527	119337313	+	ENST00000311413.4@RNF26	ENST00000311413.4	protein_coding	119334527	119337313	Gene ID= ENSG00000173456.4 TPM= 27.62 Transcript Type= protein_coding
chr11	119338939	119340883	119338939	119340883	-	ENST00000528368.2@C1QTNF5	ENST00000528368.2	protein_coding	119340695,119340184,119338939	119340883,119340440,119339848	Gene ID= ENSG00000223953.5 TPM= 91.88 Transcript Type= protein_coding
chr11	119338942	119346673	119338942	119346673	-	ENST00000619721.5@MFRP	ENST00000619721.5	protein_coding	119346460,119346272,119346046,119345773,119345420,119344874,119344632,119344315,119343816,119342873,119342596,119341857,119340695,119340184,119338942	119346673,119346374,119346159,119345928,119345633,119345004,119344757,119344391,119343964,119343003,119342727,119341984,119341772,119340440,119339848	Gene ID= ENSG00000235718.8 TPM= 92.94 Transcript Type= protein_coding
chr11	119338942	119341188	119338942	119341188	-	transcript5790.chr11.nic@MFRP	transcript5790.chr11.nic	protein_coding	119340695,119338942	119341188,119340440	Gene ID= ENSG00000235718.8 TPM= 5.31 Transcript Type= NA
chr11	119360429	119364200	119360429	119364200	-	transcript5814.chr11.nnic@NA	transcript5814.chr11.nnic	NA	119360429	119364200	Gene ID= novel_gene_chr11_5815 TPM= 5.31 Transcript Type= NA
chr11	119364299	119412564	119364299	119412564	+	transcript5800.chr11.nnic@USP2-AS1	transcript5800.chr11.nnic	antisense_RNA	119364299,119381462,119394981,119410678,119412471	119364530,119381908,119395154,119410775,119412564	Gene ID= ENSG00000245248.7 TPM= 5.31 Transcript Type= NA
chr11	119417378	119424128	119417378	119424128	-	ENST00000284240.9@THY1	ENST00000284240.9	protein_coding	119423113,119420869,119420051,119417378	119424128,119420929,119420386,119419520	Gene ID= ENSG00000154096.13 TPM= 9.56 Transcript Type= protein_coding
chr11	120210767	120230332	120210767	120230332	+	ENST00000328965.8@OAF	ENST00000328965.8	protein_coding	120210767,120225661,120226816,120228868	120211510,120225795,120226996,120230332	Gene ID= ENSG00000184232.8 TPM= 41.42 Transcript Type= protein_coding
chr11	120325298	120330642	120325298	120330642	+	transcript5822.chr11.nic@TMEM136	transcript5822.chr11.nic	protein_coding	120325298,120327441,120329977,120330407	120325368,120327640,120330049,120330642	Gene ID= ENSG00000181264.8 TPM= 3.19 Transcript Type= NA
chr11	120325129	120333679	120325129	120333679	+	ENST00000375095.2@TMEM136	ENST00000375095.2	protein_coding	120325129,120327441,120329977	120325368,120327640,120333679	Gene ID= ENSG00000181264.8 TPM= 12.75 Transcript Type= protein_coding
chr11	120325296	120333679	120325296	120333679	+	ENST00000531346.1@TMEM136	ENST00000531346.1	protein_coding	120325296,120329977	120325368,120333679	Gene ID= ENSG00000181264.8 TPM= 4.25 Transcript Type= processed_transcript
chr11	120367953	120370964	120367953	120370964	-	transcript5846.chr11.nnic@NA	transcript5846.chr11.nnic	NA	120367953	120370964	Gene ID= novel_gene_chr11_5847 TPM= 4.25 Transcript Type= NA
chr11	120425341	120427032	120425341	120427032	-	transcript5844.chr11.nnic@NA	transcript5844.chr11.nnic	NA	120425341	120427032	Gene ID= novel_gene_chr11_5845 TPM= 3.19 Transcript Type= NA
chr11	121024121	121090775	121024121	121090775	+	ENST00000422003.6@TBCEL	ENST00000422003.6	protein_coding	121024121,121045674,121047528,121053551,121055052,121058345,121059969,121086778	121024291,121045823,121047667,121053732,121055308,121058471,121060085,121090775	Gene ID= ENSG00000154114.12 TPM= 7.44 Transcript Type= protein_coding
chr11	121292453	121308694	121292453	121308694	+	ENST00000264027.8@SC5D	ENST00000264027.8	protein_coding	121292453,121303366,121304361,121306386,121307057	121292816,121303585,121304493,121306486,121308694	Gene ID= ENSG00000109929.9 TPM= 7.44 Transcript Type= protein_coding
chr11	121292771	121305710	121292771	121305710	+	ENST00000524683.5@SC5D	ENST00000524683.5	protein_coding	121292771,121303366	121292816,121305710	Gene ID= ENSG00000109929.9 TPM= 1.06 Transcript Type= retained_intron
chr11	121310571	121313404	121310571	121313404	+	transcript5859.chr11.nnic@NA	transcript5859.chr11.nnic	NA	121310571	121313404	Gene ID= novel_gene_chr11_5860 TPM= 2.12 Transcript Type= NA
chr11	122028329	122100452	122028329	122100452	-	transcript5863.chr11.nnic@MIR100HG	transcript5863.chr11.nnic	processed_transcript	122100374,122066136,122064180,122028329	122100452,122066434,122064271,122028845	Gene ID= ENSG00000255248.7 TPM= 3.19 Transcript Type= NA
chr11	122028325	122100448	122028325	122100448	-	transcript5866.chr11.nnic@MIR100HG	transcript5866.chr11.nnic	processed_transcript	122100374,122033314,122028325	122100448,122033462,122028845	Gene ID= ENSG00000255248.7 TPM= 5.31 Transcript Type= NA
chr11	122089103	122102178	122089103	122102178	-	ENST00000531381.1@MIR100HG	ENST00000531381.1	processed_transcript	122101447,122089103	122102178,122091740	Gene ID= ENSG00000255248.7 TPM= 16.99 Transcript Type= lincRNA
chr11	122089106	122102166	122089106	122102166	-	ENST00000529823.1@MIR100HG	ENST00000529823.1	processed_transcript	122101447,122089106	122102166,122091719	Gene ID= ENSG00000255248.7 TPM= 20.18 Transcript Type= lincRNA
chr11	122089110	122100447	122089110	122100447	-	ENST00000524376.1@MIR100HG	ENST00000524376.1	processed_transcript	122100374,122089110	122100447,122091719	Gene ID= ENSG00000255248.7 TPM= 4.25 Transcript Type= lincRNA
chr11	122089110	122101029	122089110	122101029	-	ENST00000528986.1@MIR100HG	ENST00000528986.1	processed_transcript	122100374,122089110	122101029,122091740	Gene ID= ENSG00000255248.7 TPM= 4.25 Transcript Type= lincRNA
chr11	122095885	122097663	122095885	122097663	-	transcript5878.chr11.nnic@NA	transcript5878.chr11.nnic	NA	122095885	122097663	Gene ID= novel_gene_chr11_5879 TPM= 2.12 Transcript Type= NA
chr11	122309522	122309626	122309522	122309626	-	transcript5880.chr11.nnic@NA	transcript5880.chr11.nnic	NA	122309522	122309626	Gene ID= novel_gene_chr11_5881 TPM= 2.12 Transcript Type= NA
chr11	122655675	122814473	122655675	122814473	+	ENST00000284273.5@UBASH3B	ENST00000284273.5	protein_coding	122655675,122776219,122777024,122779497,122783053,122789100,122794702,122796156,122796911,122798942,122801188,122806410,122808067,122809749	122656210,122776272,122777210,122779695,122783222,122789308,122794834,122796276,122797033,122799034,122801332,122806516,122808176,122814473	Gene ID= ENSG00000154127.9 TPM= 1.06 Transcript Type= protein_coding
chr11	122882528	122959721	122882528	122959721	+	ENST00000227349.6@C11orf63	ENST00000227349.6	protein_coding	122882528,122885761,122903925,122924897,122934420,122946498,122956496,122957363,122959248	122882972,122886193,122904444,122925010,122935075,122946792,122956576,122957491,122959721	Gene ID= ENSG00000109944.10 TPM= 2.12 Transcript Type= protein_coding
chr11	122882683	122905892	122882683	122905892	+	ENST00000307257.10@C11orf63	ENST00000307257.10	protein_coding	122882683,122885761,122903925,122905172	122882972,122886193,122904444,122905892	Gene ID= ENSG00000109944.10 TPM= 1.06 Transcript Type= protein_coding
chr11	123057489	123062335	123057489	123062335	-	ENST00000534624.5@HSPA8	ENST00000534624.5	protein_coding	123062064,123061120,123060593,123060116,123059473,123059059,123058632,123058252,123057489	123062335,123061329,123060798,123060268,123060028,123059261,123058830,123058484,123057919	Gene ID= ENSG00000109971.13 TPM= 3064.76 Transcript Type= protein_coding
chr11	123057489	123062335	123057489	123062335	-	ENST00000453788.6@HSPA8	ENST00000453788.6	protein_coding	123062064,123061120,123060593,123060116,123059473,123059059,123058767,123057489	123062335,123061329,123060798,123060268,123060028,123059261,123058830,123057828	Gene ID= ENSG00000109971.13 TPM= 40.36 Transcript Type= protein_coding
chr11	123057497	123061332	123057497	123061332	-	ENST00000227378.7@HSPA8	ENST00000227378.7	protein_coding	123061120,123060593,123060116,123059473,123059059,123058632,123058252,123057497	123061332,123060798,123060268,123060028,123059261,123058830,123058484,123057919	Gene ID= ENSG00000109971.13 TPM= 72.12 Transcript Type= protein_coding
chr11	123062632	123084877	123062632	123084877	+	transcript5918.chr11.nnic@NA	transcript5918.chr11.nnic	NA	123062632,123063331,123084571	123062697,123063513,123084877	Gene ID= novel_gene_chr11_5919 TPM= 2.12 Transcript Type= NA
chr11	123629835	123631801	123629835	123631801	-	transcript5924.chr11.nnic@NA	transcript5924.chr11.nnic	NA	123629835	123631801	Gene ID= novel_gene_chr11_5925 TPM= 2.12 Transcript Type= NA
chr11	123724341	123741660	123724341	123741660	-	transcript5927.chr11.nic@ZNF202	transcript5927.chr11.nic	protein_coding	123741549,123740417,123740117,123730487,123729615,123729126,123728133,123727476,123724341	123741660,123740536,123740232,123730985,123729825,123729214,123728262,123727595,123726991	Gene ID= ENSG00000166261.10 TPM= 3.19 Transcript Type= NA
chr11	123724780	123741671	123724780	123741671	-	ENST00000529691.1@ZNF202	ENST00000529691.1	protein_coding	123741549,123730487,123729615,123729126,123728133,123727476,123724780	123741671,123730985,123729825,123729214,123728262,123727595,123726991	Gene ID= ENSG00000166261.10 TPM= 2.12 Transcript Type= protein_coding
chr11	124115404	124146909	124115404	124146909	+	ENST00000392748.5@VWA5A	ENST00000392748.5	protein_coding	124115404,124117497,124117673,124118189,124118533,124118975,124122960,124123366,124123660,124124237,124134920,124136129,124136574,124137015,124141598,124142442,124145237,124145866	124115482,124117554,124117875,124118411,124118708,124119089,124123129,124123454,124123804,124124316,124135034,124136293,124136674,124137268,124141741,124142572,124145363,124146909	Gene ID= ENSG00000110002.15 TPM= 3.19 Transcript Type= protein_coding
chr11	124115404	124124841	124115404	124124841	+	ENST00000449321.5@VWA5A	ENST00000449321.5	protein_coding	124115404,124116566,124117497,124117673,124118189,124118533,124118975,124122960,124123366,124123660,124124237	124115482,124116680,124117554,124117875,124118411,124118708,124119089,124123129,124123454,124123804,124124841	Gene ID= ENSG00000110002.15 TPM= 2.12 Transcript Type= protein_coding
chr11	124115404	124124841	124115404	124124841	+	ENST00000361352.9@VWA5A	ENST00000361352.9	protein_coding	124115404,124117497,124117673,124118189,124118533,124118975,124122960,124123366,124123660,124124237	124115482,124117554,124117875,124118411,124118708,124119089,124123129,124123454,124123804,124124841	Gene ID= ENSG00000110002.15 TPM= 1.06 Transcript Type= protein_coding
chr11	124622836	124632434	124622836	124632434	+	ENST00000473629.6@TBRG1	ENST00000473629.6	protein_coding	124622836,124624931,124625671,124626813,124630388,124630745,124631275,124632093	124623233,124625001,124625903,124627050,124630485,124630855,124631417,124632434	Gene ID= ENSG00000154144.12 TPM= 3.19 Transcript Type= retained_intron
chr11	124622875	124635398	124622875	124635398	+	ENST00000284290.8@TBRG1	ENST00000284290.8	protein_coding	124622875,124624931,124625671,124626904,124630388,124630745,124631275,124632093	124623233,124625001,124625903,124627050,124630485,124630855,124631417,124635398	Gene ID= ENSG00000154144.12 TPM= 2.12 Transcript Type= nonsense_mediated_decay
chr11	124633113	124673881	124633113	124673881	-	ENST00000263593.7@SIAE	ENST00000263593.7	protein_coding	124673642,124669360,124660628,124654655,124649619,124648066,124647365,124639710,124638542,124633113	124673881,124669521,124660803,124654793,124649796,124648175,124647498,124639867,124638737,124637202	Gene ID= ENSG00000110013.12 TPM= 3.19 Transcript Type= protein_coding
chr11	124635789	124652711	124635789	124652711	-	transcript5951.chr11.nic@SIAE	transcript5951.chr11.nic	protein_coding	124649619,124648066,124647365,124639710,124638542,124635789	124652711,124648175,124647498,124639867,124638737,124637202	Gene ID= ENSG00000110013.12 TPM= 25.49 Transcript Type= NA
chr11	124652920	124673767	124652920	124673767	-	transcript5952.chr11.nnic@SIAE	transcript5952.chr11.nnic	protein_coding	124673642,124669360,124660628,124654655,124652920	124673767,124669521,124660803,124654793,124654493	Gene ID= ENSG00000110013.12 TPM= 2.12 Transcript Type= NA
chr11	124673798	124694661	124673798	124694661	+	ENST00000227135.6@SPA17	ENST00000227135.6	protein_coding	124673798,124675238,124681389,124691696,124694303	124673952,124675418,124681459,124691782,124694661	Gene ID= ENSG00000064199.6 TPM= 1.06 Transcript Type= protein_coding
chr11	124739846	124747210	124739846	124747210	+	ENST00000284292.10@NRGN	ENST00000284292.10	protein_coding	124739846,124745503,124745965,124746404	124740099,124745729,124745982,124747210	Gene ID= ENSG00000154146.12 TPM= 2.66 Transcript Type= protein_coding
chr11	124740045	124747206	124740045	124747206	+	ENST00000412681.2@NRGN	ENST00000412681.2	protein_coding	124740045,124745503,124745962,124746404	124740099,124745729,124745982,124747206	Gene ID= ENSG00000154146.12 TPM= 1.59 Transcript Type= protein_coding
chr11	124753123	124762288	124753123	124762288	-	transcript5968.chr11.nnic@ESAM	transcript5968.chr11.nnic	protein_coding	124762085,124756541,124756207,124754641,124754214,124753123	124762288,124756742,124756362,124754763,124754340,124753961	Gene ID= ENSG00000149564.11 TPM= 12.75 Transcript Type= NA
chr11	124753123	124762284	124753123	124762284	-	ENST00000278927.9@ESAM	ENST00000278927.9	protein_coding	124762085,124758349,124756541,124756207,124754641,124754214,124753123	124762284,124758527,124756742,124756362,124754763,124754340,124753961	Gene ID= ENSG00000149564.11 TPM= 62.67 Transcript Type= protein_coding
chr11	124753123	124762280	124753123	124762280	-	ENST00000417453.5@ESAM	ENST00000417453.5	protein_coding	124762085,124758349,124756541,124756207,124754630,124754214,124753123	124762280,124758527,124756742,124756362,124754763,124754340,124753961	Gene ID= ENSG00000149564.11 TPM= 14.87 Transcript Type= nonsense_mediated_decay
chr11	124757695	124761868	124757695	124761868	-	transcript5972.chr11.nnic@NA	transcript5972.chr11.nnic	NA	124757695	124761868	Gene ID= novel_gene_chr11_5973 TPM= 11.68 Transcript Type= NA
chr11	124766516	124800389	124766516	124800389	-	ENST00000374979.7@MSANTD2	ENST00000374979.7	protein_coding	124799871,124774719,124772994,124766516	124800389,124774974,124773054,124768028	Gene ID= ENSG00000120458.10 TPM= 2.12 Transcript Type= protein_coding
chr11	124877231	124881470	124877231	124881470	+	transcript5984.chr11.nic@ROBO3	transcript5984.chr11.nic	protein_coding	124877231,124878584,124879465,124879787,124880418,124881239	124878436,124879341,124879575,124879948,124880608,124881470	Gene ID= ENSG00000154134.14 TPM= 2.12 Transcript Type= NA
chr11	124884711	124897868	124884711	124897868	-	ENST00000533054.5@ROBO4	ENST00000533054.5	protein_coding	124897726,124896932,124896513,124896198,124895785,124895457,124895081,124894201,124893860,124893688,124891666,124891299,124887733,124887358,124886977,124886464,124885041,124884711	124897868,124897055,124896670,124896318,124895912,124895685,124895193,124894369,124894045,124893730,124891802,124891562,124887840,124887499,124887213,124886822,124885247,124884913	Gene ID= ENSG00000154133.14 TPM= 2.12 Transcript Type= protein_coding
chr11	125174746	125178624	125174746	125178624	+	transcript5989.chr11.nnic@NA	transcript5989.chr11.nnic	NA	125174746	125178624	Gene ID= novel_gene_chr11_5990 TPM= 2.12 Transcript Type= NA
chr11	125445753	125496275	125445753	125496275	-	transcript5992.chr11.nic@FEZ1	transcript5992.chr11.nic	protein_coding	125496121,125489467,125481534,125469049,125463484,125460498,125455835,125454130,125452334,125448502,125445753	125496275,125489822,125481633,125469156,125463570,125460666,125456106,125454210,125452409,125448567,125446111	Gene ID= ENSG00000149557.12 TPM= 2.12 Transcript Type= NA
chr11	125460164	125496236	125460164	125496236	-	transcript5995.chr11.nic@FEZ1	transcript5995.chr11.nic	protein_coding	125496121,125489467,125481534,125463484,125460164	125496236,125489822,125481633,125463570,125460666	Gene ID= ENSG00000149557.12 TPM= 2.12 Transcript Type= NA
chr11	125445753	125452796	125445753	125452796	-	transcript5996.chr11.nic@FEZ1	transcript5996.chr11.nic	protein_coding	125452508,125452334,125448502,125445753	125452796,125452409,125448567,125446111	Gene ID= ENSG00000149557.12 TPM= 2.66 Transcript Type= NA
chr11	125445745	125451520	125445745	125451520	-	ENST00000526507.5@FEZ1	ENST00000526507.5	protein_coding	125451411,125448502,125445745	125451520,125448567,125446111	Gene ID= ENSG00000149557.12 TPM= 2.66 Transcript Type= processed_transcript
chr11	125445761	125496310	125445761	125496310	-	ENST00000278919.7@FEZ1	ENST00000278919.7	protein_coding	125496121,125489467,125481534,125463484,125460498,125455835,125454130,125452334,125448502,125445761	125496310,125489822,125481633,125463570,125460666,125456106,125454210,125452409,125448567,125446111	Gene ID= ENSG00000149557.12 TPM= 61.61 Transcript Type= protein_coding
chr11	125569216	125584687	125569216	125584687	+	ENST00000278903.10@EI24	ENST00000278903.10	protein_coding	125569216,125572458,125575263,125576255,125577504,125578133,125578949,125580093,125581211,125582346,125583521	125569573,125572569,125575408,125576315,125577570,125578257,125579068,125580204,125581322,125582420,125584687	Gene ID= ENSG00000149547.14 TPM= 86.75 Transcript Type= protein_coding
chr11	125569458	125584209	125569458	125584209	+	ENST00000618552.4@EI24	ENST00000618552.4	protein_coding	125569458,125572458,125575251,125576255,125577504,125578133,125578949,125580093,125581211,125582346,125583521	125569573,125572569,125575408,125576315,125577570,125578257,125579068,125580204,125581322,125582420,125584209	Gene ID= ENSG00000149547.14 TPM= 71.88 Transcript Type= protein_coding
chr11	125569489	125584242	125569489	125584242	+	ENST00000527235.6@EI24	ENST00000527235.6	protein_coding	125569489,125572458,125575263,125576255,125577504,125578133,125578949,125580093,125582346,125583521	125569573,125572569,125575408,125576315,125577570,125578257,125579068,125580204,125582420,125584242	Gene ID= ENSG00000149547.14 TPM= 12.75 Transcript Type= protein_coding
chr11	125592795	125623091	125592795	125623091	+	ENST00000392708.8@STT3A	ENST00000392708.8	protein_coding	125592795,125595881,125597059,125602303,125602803,125604157,125605629,125606301,125608109,125609434,125611428,125612592,125612989,125614087,125614324,125618373,125620011,125620772	125592918,125596003,125597119,125602424,125602948,125604247,125605735,125606465,125608289,125609589,125611519,125612747,125613177,125614203,125614426,125618561,125620126,125623091	Gene ID= ENSG00000134910.12 TPM= 56.29 Transcript Type= protein_coding
chr11	125887060	125900648	125887060	125900648	+	ENST00000425380.6@HYLS1	ENST00000425380.6	protein_coding	125887060,125891423,125899344	125887765,125891472,125900648	Gene ID= ENSG00000198331.10 TPM= 5.31 Transcript Type= protein_coding
chr11	125893486	125903221	125893486	125903221	-	ENST00000227474.7@PUS3	ENST00000227474.7	protein_coding	125903170,125895907,125895224,125893486	125903221,125896330,125895789,125894286	Gene ID= ENSG00000110060.8 TPM= 4.25 Transcript Type= protein_coding
chr11	125893486	125903221	125893486	125903221	-	ENST00000613398.4@PUS3	ENST00000613398.4	protein_coding	125903170,125895224,125893486	125903221,125895789,125894286	Gene ID= ENSG00000110060.8 TPM= 2.12 Transcript Type= protein_coding
chr11	126202094	126211692	126202094	126211692	-	ENST00000298317.8@RPUSD4	ENST00000298317.8	protein_coding	126211450,126210890,126209521,126205688,126205468,126204231,126202094	126211692,126211055,126209722,126205781,126205612,126204328,126203657	Gene ID= ENSG00000165526.8 TPM= 17.53 Transcript Type= protein_coding
chr11	126202414	126207685	126202414	126207685	-	transcript6056.chr11.nnic@RPUSD4	transcript6056.chr11.nnic	protein_coding	126207533,126205688,126205468,126204231,126202414	126207685,126205781,126205612,126204328,126203657	Gene ID= ENSG00000165526.8 TPM= 3.19 Transcript Type= NA
chr11	126211414	126262986	126211414	126262986	+	ENST00000533050.5@FAM118B	ENST00000533050.5	protein_coding	126211414,126229225,126234995,126240792,126250506,126254305,126256567,126261425,126262120	126211830,126229293,126235087,126241044,126250733,126254433,126256852,126261484,126262986	Gene ID= ENSG00000197798.8 TPM= 5.31 Transcript Type= protein_coding
chr11	126211773	126262631	126211773	126262631	+	ENST00000360194.8@FAM118B	ENST00000360194.8	protein_coding	126211773,126234995,126240792,126250506,126254305,126256567,126261428,126262120	126211830,126235087,126241044,126250733,126254433,126256852,126261484,126262631	Gene ID= ENSG00000197798.8 TPM= 6.37 Transcript Type= protein_coding
chr11	126262919	126268959	126262919	126268959	-	ENST00000332118.10@SRPRA	ENST00000332118.10	protein_coding	126268688,126268003,126267549,126267175,126266763,126266476,126266187,126265963,126265737,126265268,126264959,126264376,126264191,126262919	126268959,126268086,126267712,126267335,126266922,126266629,126266278,126266081,126265823,126265440,126265172,126264539,126264289,126264044	Gene ID= ENSG00000182934.11 TPM= 95.59 Transcript Type= protein_coding
chr11	126266129	126267620	126266129	126267620	+	transcript6061.chr11.nnic@NA	transcript6061.chr11.nnic	NA	126266129	126267620	Gene ID= novel_gene_chr11_6062 TPM= 4.25 Transcript Type= NA
chr11	126269133	126278124	126269133	126278124	+	ENST00000263578.9@FOXRED1	ENST00000263578.9	protein_coding	126269133,126271437,126272969,126273336,126274927,126275327,126275794,126276059,126276394,126277071,126277435	126269291,126271657,126273079,126273454,126275021,126275428,126275870,126276219,126276523,126277175,126278124	Gene ID= ENSG00000110074.10 TPM= 45.67 Transcript Type= protein_coding
chr11	126283082	126293244	126283082	126293244	+	transcript6068.chr11.nic@TIRAP	transcript6068.chr11.nic	protein_coding	126283082,126290462,126290803,126292477	126283153,126290585,126290961,126293244	Gene ID= ENSG00000150455.13 TPM= 3.19 Transcript Type= NA
chr11	126303752	126345749	126303752	126345749	+	ENST00000263579.4@DCPS	ENST00000263579.4	protein_coding	126303752,126306570,126331405,126338286,126343307,126345347	126304281,126306744,126331550,126338399,126343417,126345749	Gene ID= ENSG00000110063.8 TPM= 11.68 Transcript Type= protein_coding
chr11	126340889	126355579	126340889	126355579	-	ENST00000629441.1@GSEC	ENST00000629441.1	antisense_RNA	126355442,126340889	126355579,126342322	Gene ID= ENSG00000280832.1 TPM= 3.19 Transcript Type= antisense_RNA
chr11	126355684	126414638	126355684	126414638	+	ENST00000444328.6@ST3GAL4	ENST00000444328.6	protein_coding	126355684,126406096,126406473,126406943,126407252,126407574,126408099,126408307,126409268,126413505,126413961	126355842,126406171,126406557,126407023,126407349,126407634,126408194,126408496,126409411,126413648,126414638	Gene ID= ENSG00000110080.18 TPM= 41.42 Transcript Type= protein_coding
chr11	126355660	126414604	126355660	126414604	+	ENST00000227495.10@ST3GAL4	ENST00000227495.10	protein_coding	126355660,126406096,126406473,126406943,126407252,126407574,126408099,126408307,126409268,126413505,126413961	126355842,126406171,126406545,126407023,126407349,126407634,126408194,126408496,126409411,126413648,126414604	Gene ID= ENSG00000110080.18 TPM= 10.62 Transcript Type= protein_coding
chr11	126355742	126359309	126355742	126359309	+	transcript6091.chr11.nnic@NA	transcript6091.chr11.nnic	NA	126355742	126359309	Gene ID= novel_gene_chr11_6092 TPM= 7.44 Transcript Type= NA
chr11	128691672	128693514	128691672	128693514	-	transcript6095.chr11.nic@SENCR	transcript6095.chr11.nic	antisense_RNA	128692655,128691672	128693514,128692121	Gene ID= ENSG00000254703.2 TPM= 3.19 Transcript Type= NA
chr11	128693770	128813267	128693770	128813267	+	ENST00000527786.6@FLI1	ENST00000527786.6	protein_coding	128693770,128758115,128768118,128772782,128781958,128805366,128807180,128809157,128810459	128694276,128758326,128768272,128772985,128782023,128805431,128807239,128809204,128813267	Gene ID= ENSG00000151702.16 TPM= 2.12 Transcript Type= protein_coding
chr11	128891442	128912456	128891442	128912456	+	transcript6105.chr11.nic@KCNJ5	transcript6105.chr11.nic	protein_coding	128891442,128911264	128891721,128912456	Gene ID= ENSG00000120457.11 TPM= 2.12 Transcript Type= NA
chr11	128918732	128921163	128918732	128921163	+	transcript6106.chr11.nnic@NA	transcript6106.chr11.nnic	NA	128918732	128921163	Gene ID= novel_gene_chr11_6107 TPM= 6.37 Transcript Type= NA
chr11	129233765	129237249	129233765	129237249	-	transcript6109.chr11.nnic@NA	transcript6109.chr11.nnic	NA	129233765	129237249	Gene ID= novel_gene_chr11_6110 TPM= 2.12 Transcript Type= NA
chr11	130001386	130002221	130001386	130002221	-	transcript6115.chr11.nnic@NA	transcript6115.chr11.nnic	NA	130001386	130002221	Gene ID= novel_gene_chr11_6116 TPM= 4.25 Transcript Type= NA
chr11	130069894	130143806	130069894	130143806	+	ENST00000528499.5@APLP2	ENST00000528499.5	protein_coding	130069894,130109429,130110538,130120706,130121614,130122305,130126700,130127766,130129048,130130038,130133629,130135563,130140398,130141498,130141919,130143347	130070082,130109602,130110661,130120818,130121810,130122513,130126830,130127840,130129206,130130166,130133728,130135715,130140483,130141572,130142074,130143806	Gene ID= ENSG00000084234.16 TPM= 18.06 Transcript Type= protein_coding
chr11	130069906	130144811	130069906	130144811	+	ENST00000263574.9@APLP2	ENST00000263574.9	protein_coding	130069906,130109429,130110538,130120706,130121614,130122305,130123612,130126700,130127766,130129048,130130038,130133629,130135563,130137256,130140398,130141498,130141919,130143347	130070082,130109602,130110661,130120818,130121810,130122513,130123779,130126830,130127840,130129206,130130166,130133728,130135715,130137291,130140483,130141572,130142074,130144811	Gene ID= ENSG00000084234.16 TPM= 35.58 Transcript Type= protein_coding
chr11	130159562	130210376	130159562	130210376	+	ENST00000278742.5@ST14	ENST00000278742.5	protein_coding	130159562,130188114,130188530,130188869,130189739,130190113,130190454,130194149,130194640,130196339,130196570,130197841,130198308,130198508,130198947,130199951,130208410,130209442,130209662	130160060,130188273,130188657,130188939,130189896,130190148,130190694,130194288,130194737,130196448,130196700,130197945,130198418,130198621,130199069,130200137,130208684,130209578,130210376	Gene ID= ENSG00000149418.10 TPM= 2.12 Transcript Type= protein_coding
chr11	130404925	130428993	130404925	130428993	-	ENST00000257359.6@ADAMTS8	ENST00000257359.6	protein_coding	130427567,130419053,130416940,130416163,130414531,130411417,130408768,130408464,130404925	130428993,130419292,130417075,130416330,130414832,130411600,130408940,130408639,130406128	Gene ID= ENSG00000134917.9 TPM= 7.44 Transcript Type= protein_coding
chr11	130875874	130916505	130875874	130916505	-	transcript6153.chr11.nnic@SNX19	transcript6153.chr11.nnic	protein_coding	130916280,130911633,130910270,130910018,130908361,130907953,130906625,130905953,130903255,130880622,130879624,130875874	130916505,130911771,130910370,130910137,130908445,130908083,130906721,130906133,130903384,130880806,130879711,130878554	Gene ID= ENSG00000120451.10 TPM= 6.37 Transcript Type= NA
chr11	130875436	130916509	130875436	130916509	-	ENST00000265909.8@SNX19	ENST00000265909.8	protein_coding	130914266,130911633,130910270,130910018,130907953,130906625,130905953,130903255,130880622,130879624,130875436	130916509,130911771,130910370,130910137,130908083,130906721,130906133,130903384,130880806,130879711,130878554	Gene ID= ENSG00000120451.10 TPM= 16.99 Transcript Type= protein_coding
chr11	130910302	130911208	130910302	130911208	+	transcript6156.chr11.nnic@NA	transcript6156.chr11.nnic	NA	130910302	130911208	Gene ID= novel_gene_chr11_6157 TPM= 4.25 Transcript Type= NA
chr11	133896438	133901601	133896438	133901601	-	ENST00000624667.1@MIR4697HG	ENST00000624667.1	TEC	133896438	133901601	Gene ID= ENSG00000280237.3 TPM= 18.06 Transcript Type= TEC
chr11	133933983	133939751	133933983	133939751	-	transcript6164.chr11.nic@IGSF9B	transcript6164.chr11.nic	protein_coding	133937810,133937376,133936053,133933983	133939751,133937493,133936194,133935762	Gene ID= ENSG00000080854.14 TPM= 3.19 Transcript Type= NA
chr11	133908564	133956985	133908564	133956985	-	ENST00000533871.6@IGSF9B	ENST00000533871.6	protein_coding	133956691,133946061,133944220,133937810,133937376,133936053,133935617,133932071,133931655,133931453,133930984,133929671,133926916,133925739,133924820,133922569,133922177,133919742,133911886,133908564	133956985,133946258,133944366,133937961,133937493,133936194,133935762,133932213,133931795,133931569,133931134,133929782,133927091,133925965,133924904,133922730,133922222,133921397,133912007,133909277	Gene ID= ENSG00000080854.14 TPM= 8.5 Transcript Type= protein_coding
chr11	134068925	134152001	134068925	134152001	+	ENST00000299106.8@JAM3	ENST00000299106.8	protein_coding	134068925,134139851,134140657,134144241,134144792,134145946,134148547,134148764,134149146	134069159,134139916,134140770,134144393,134144994,134146045,134148676,134148818,134152001	Gene ID= ENSG00000166086.12 TPM= 62.67 Transcript Type= protein_coding
chr11	134120855	134125162	134120855	134125162	-	transcript6171.chr11.nnic@NA	transcript6171.chr11.nnic	NA	134120855	134125162	Gene ID= novel_gene_chr11_6172 TPM= 2.12 Transcript Type= NA
chr11	134123172	134125208	134123172	134125208	-	transcript6169.chr11.nnic@NA	transcript6169.chr11.nnic	NA	134123172	134125208	Gene ID= novel_gene_chr11_6170 TPM= 9.56 Transcript Type= NA
chr11	134152445	134176418	134152445	134176418	-	transcript6178.chr11.nic@NCAPD3	transcript6178.chr11.nic	protein_coding	134176307,134168917,134168469,134167996,134161781,134159892,134158329,134157928,134157018,134153289,134153140,134152445	134176418,134169054,134168602,134168195,134161891,134160074,134158495,134158067,134157095,134153363,134153200,134153052	Gene ID= ENSG00000151503.12 TPM= 3.19 Transcript Type= NA
chr11	134210356	134225486	134210356	134225486	-	transcript6184.chr11.nic@NCAPD3	transcript6184.chr11.nic	protein_coding	134225097,134223863,134220572,134216936,134210356	134225486,134224000,134220726,134217098,134210454	Gene ID= ENSG00000151503.12 TPM= 3.19 Transcript Type= NA
chr11	134152445	134223991	134152445	134223991	-	ENST00000534548.6@NCAPD3	ENST00000534548.6	protein_coding	134223863,134220572,134216936,134210270,134209313,134209145,134208864,134206599,134204899,134204046,134203654,134203142,134202816,134194665,134194016,134192689,134185335,134184903,134184637,134181077,134178822,134178634,134177219,134176307,134168917,134168469,134167996,134161781,134159892,134158329,134157928,134157018,134153289,134153140,134152445	134223991,134220726,134217098,134210454,134209477,134209206,134208951,134206732,134204971,134204171,134203906,134203198,134202905,134194738,134194150,134192909,134185526,134185000,134184752,134181184,134178936,134178741,134177457,134176386,134169054,134168602,134168195,134161891,134160074,134158495,134158067,134157095,134153363,134153200,134153052	Gene ID= ENSG00000151503.12 TPM= 4.25 Transcript Type= protein_coding
chr11	134224645	134247792	134224645	134247792	+	ENST00000281187.9@VPS26B	ENST00000281187.9	protein_coding	134224645,134234897,134239991,134243119,134244938,134245444	134225345,134235053,134240155,134243294,134245080,134247792	Gene ID= ENSG00000151502.10 TPM= 67.98 Transcript Type= protein_coding
chr11	134224677	134245729	134224677	134245729	+	ENST00000525095.2@VPS26B	ENST00000525095.2	protein_coding	134224677,134224800,134234897,134239991,134243119,134244938,134245444	134224761,134225345,134235053,134240155,134243294,134245080,134245729	Gene ID= ENSG00000151502.10 TPM= 77.54 Transcript Type= protein_coding
chr11	134248288	134253399	134248288	134253399	-	transcript6196.chr11.nic@THYN1	transcript6196.chr11.nic	protein_coding	134253299,134252840,134251130,134250275,134249828,134249167,134248288	134253399,134252916,134251308,134250343,134249920,134249262,134248484	Gene ID= ENSG00000151500.14 TPM= 5.31 Transcript Type= NA
chr11	134248288	134253364	134248288	134253364	-	transcript6198.chr11.nic@THYN1	transcript6198.chr11.nic	protein_coding	134252840,134251130,134250275,134249828,134249167,134248288	134253364,134251308,134250343,134249920,134249262,134248484	Gene ID= ENSG00000151500.14 TPM= 4.25 Transcript Type= NA
chr11	134248279	134253370	134248279	134253370	-	ENST00000392594.7@THYN1	ENST00000392594.7	protein_coding	134253299,134252840,134251130,134250275,134249828,134249167,134248809,134248279	134253370,134252916,134251308,134250343,134249920,134249262,134248959,134248484	Gene ID= ENSG00000151500.14 TPM= 57.36 Transcript Type= protein_coding
chr11	134248279	134253344	134248279	134253344	-	ENST00000341541.7@THYN1	ENST00000341541.7	protein_coding	134252840,134251130,134250275,134249828,134249167,134248809,134248279	134253344,134251308,134250343,134249920,134249262,134248959,134248484	Gene ID= ENSG00000151500.14 TPM= 14.87 Transcript Type= protein_coding
chr11	134248288	134253350	134248288	134253350	-	ENST00000352327.5@THYN1	ENST00000352327.5	protein_coding	134253227,134252840,134251130,134250275,134249828,134249167,134248288	134253350,134252916,134251308,134250343,134249920,134249262,134248484	Gene ID= ENSG00000151500.14 TPM= 2.12 Transcript Type= protein_coding
chr11	134253527	134263100	134253527	134263100	+	transcript6206.chr11.nic@ACAD8	transcript6206.chr11.nic	protein_coding	134253527,134256548,134257088,134258515,134259008,134259608,134261044,134261275,134261738,134262520,134262770	134253709,134256648,134257257,134258624,134259084,134259745,134261179,134261372,134261890,134262622,134263100	Gene ID= ENSG00000151498.11 TPM= 5.31 Transcript Type= NA
chr11	134253495	134265855	134253495	134265855	+	ENST00000281182.8@ACAD8	ENST00000281182.8	protein_coding	134253495,134256548,134257088,134258515,134259008,134259608,134261044,134261275,134261738,134262520,134264908	134253709,134256648,134257257,134258624,134259084,134259745,134261179,134261372,134261890,134262622,134265855	Gene ID= ENSG00000151498.11 TPM= 72.07 Transcript Type= protein_coding
chr11	134253527	134265855	134253527	134265855	+	transcript6213.chr11.nic@ACAD8	transcript6213.chr11.nic	protein_coding	134253527,134256548,134257088,134258515,134259008,134259608,134261275,134261738,134262520,134264908	134253709,134256648,134257257,134258624,134259084,134261179,134261372,134261890,134262622,134265855	Gene ID= ENSG00000151498.11 TPM= 7.91 Transcript Type= NA
chr11	134253527	134265855	134253527	134265855	+	transcript6215.chr11.nic@ACAD8	transcript6215.chr11.nic	protein_coding	134253527,134256548,134258515,134259008,134259608,134261044,134261275,134261738,134262520,134264908	134253709,134256648,134258624,134259084,134259745,134261179,134261372,134261890,134262622,134265855	Gene ID= ENSG00000151498.11 TPM= 6.21 Transcript Type= NA
chr12	292954	389320	292954	389320	-	transcript15.chr12.nic@KDM5A	transcript15.chr12.nic	protein_coding	388927,385897,384031,365934,362963,356432,355158,354076,352205,350621,334241,333487,331819,328835,323600,323082,322417,320995,318106,313056,310885,309803,307454,306946,297041,295573,292954	389320,385974,384153,366104,363097,356537,355249,354234,352324,350779,334422,333649,331938,329029,323781,323206,322567,321109,318461,313194,311064,309964,308005,307089,297200,295793,293169	Gene ID= ENSG00000073614.12 TPM= 7.97 Transcript Type= NA
chr12	384307	387238	384307	387238	+	transcript21.chr12.nnic@NA	transcript21.chr12.nnic	NA	384307	387238	Gene ID= novel_gene_chr12_22 TPM= 2.12 Transcript Type= NA
chr12	401576	442645	401576	442645	+	ENST00000239830.8@CCDC77	ENST00000239830.8	protein_coding	401576,405511,409368,411747,418494,428769,430664,431866,433174,438335,440617,440844,441774	401684,405564,409421,411978,418636,428865,430736,431954,433322,438554,440742,440996,442645	Gene ID= ENSG00000120647.9 TPM= 1.06 Transcript Type= protein_coding
chr12	459934	555206	459934	555206	+	transcript31.chr12.nic@B4GALNT3	transcript31.chr12.nic	protein_coding	459934,535166,536218,544339,544882,545369,546646,548024,548231,549769,550922,552063,552467,553191	460545,535269,536295,544434,544972,545469,546713,548102,548297,549912,551031,552163,552528,555206	Gene ID= ENSG00000139044.10 TPM= 5.31 Transcript Type= NA
chr12	459934	538581	459934	538581	+	transcript39.chr12.nic@B4GALNT3	transcript39.chr12.nic	protein_coding	459934,535166,536218	460545,535269,538581	Gene ID= ENSG00000139044.10 TPM= 2.12 Transcript Type= NA
chr12	561855	567478	561855	567478	+	transcript53.chr12.nnic@NA	transcript53.chr12.nnic	NA	561855	567478	Gene ID= novel_gene_chr12_54 TPM= 2.12 Transcript Type= NA
chr12	642981	645415	642981	645415	+	ENST00000318291.4@AC021054.1	ENST00000318291.4	antisense_RNA	642981,643959	643717,645415	Gene ID= ENSG00000177406.4 TPM= 7.44 Transcript Type= antisense_RNA
chr12	752558	861135	752558	861135	+	transcript62.chr12.nic@WNK1	transcript62.chr12.nic	protein_coding	752558,813642,827042,830003,857161,859245,861013	754324,813814,827262,830160,857249,859464,861135	Gene ID= ENSG00000060237.16 TPM= 34.87 Transcript Type= NA
chr12	900559	904647	900559	904647	+	transcript66.chr12.nic@WNK1	transcript66.chr12.nic	protein_coding	900559,901561,904453	900670,901632,904647	Gene ID= ENSG00000060237.16 TPM= 2.12 Transcript Type= NA
chr12	752593	911300	752593	911300	+	ENST00000535572.5@WNK1	ENST00000535572.5	protein_coding	752593,813642,827042,830003,857161,859245,861013,862083,871265,878215,881692,881911,882943,883395,883774,884121,884649,887221,889140,890453,894562,896071,897479,900476,907847,908475	754324,813814,827262,830160,857249,859464,861343,862270,871348,878361,881789,882073,883059,883568,883831,884243,886084,887304,889223,890510,894635,896732,897681,900670,908034,911300	Gene ID= ENSG00000060237.16 TPM= 71.52 Transcript Type= protein_coding
chr12	832836	835646	832836	835646	+	transcript68.chr12.nnic@NA	transcript68.chr12.nnic	NA	832836	835646	Gene ID= novel_gene_chr12_69 TPM= 2.12 Transcript Type= NA
chr12	839886	843075	839886	843075	-	transcript72.chr12.nnic@NA	transcript72.chr12.nnic	NA	839886	843075	Gene ID= novel_gene_chr12_73 TPM= 7.44 Transcript Type= NA
chr12	991202	1110281	991202	1110281	+	transcript85.chr12.nic@ERC1	transcript85.chr12.nic	protein_coding	991202,1027748,1083164,1104750,1110192	991487,1028572,1083580,1104824,1110281	Gene ID= ENSG00000082805.19 TPM= 6.37 Transcript Type= NA
chr12	991208	1495933	991208	1495933	+	ENST00000543086.7@ERC1	ENST00000543086.7	protein_coding	991208,1027748,1083164,1104750,1110192,1115866,1141620,1180540,1181925,1183281,1189859,1236769,1263034,1289852,1371833,1408149,1444562,1490093	991322,1028572,1083580,1104824,1110347,1116033,1141787,1180677,1182065,1183421,1190052,1236904,1263165,1290012,1371977,1408247,1444750,1495933	Gene ID= ENSG00000082805.19 TPM= 25.49 Transcript Type= protein_coding
chr12	1199915	1205552	1199915	1205552	-	transcript96.chr12.nnic@NA	transcript96.chr12.nnic	NA	1199915	1205552	Gene ID= novel_gene_chr12_97 TPM= 2.12 Transcript Type= NA
chr12	1565993	1594165	1565993	1594165	-	ENST00000339235.3@FBXL14	ENST00000339235.3	protein_coding	1592873,1565993	1594165,1566810	Gene ID= ENSG00000171823.6 TPM= 1.06 Transcript Type= protein_coding
chr12	1591349	1594845	1591349	1594845	-	transcript102.chr12.nnic@NA	transcript102.chr12.nnic	NA	1591349	1594845	Gene ID= novel_gene_chr12_103 TPM= 16.99 Transcript Type= NA
chr12	1691027	1788678	1691027	1788678	+	ENST00000357103.4@ADIPOR2	ENST00000357103.4	protein_coding	1691027,1754258,1772842,1777854,1780451,1780889,1783880,1785944	1691191,1754514,1772961,1778025,1780637,1781076,1784073,1788678	Gene ID= ENSG00000006831.9 TPM= 8.5 Transcript Type= protein_coding
chr12	1946054	2004511	1946054	2004511	-	ENST00000280665.10@DCP1B	ENST00000280665.10	protein_coding	2004282,1997935,1993264,1967844,1965558,1955432,1952416,1949086,1946054	2004511,1997975,1993391,1967910,1965693,1955560,1953288,1949334,1946286	Gene ID= ENSG00000151065.13 TPM= 4.25 Transcript Type= protein_coding
chr12	1970777	2123397	1970777	2123397	+	transcript117.chr12.nic@CACNA1C	transcript117.chr12.nic	protein_coding	1970777,2115224,2120325	1971201,2115545,2123397	Gene ID= ENSG00000151067.21 TPM= 12.75 Transcript Type= NA
chr12	2052988	2123397	2052988	2123397	+	transcript119.chr12.nic@CACNA1C	transcript119.chr12.nic	protein_coding	2052988,2115224,2120325	2053611,2115545,2123397	Gene ID= ENSG00000151067.21 TPM= 11.68 Transcript Type= NA
chr12	1970787	1972480	1970787	1972480	+	transcript137.chr12.nnic@NA	transcript137.chr12.nnic	NA	1970787	1972480	Gene ID= novel_gene_chr12_138 TPM= 2.12 Transcript Type= NA
chr12	1985961	1990996	1985961	1990996	+	transcript127.chr12.nnic@NA	transcript127.chr12.nnic	NA	1985961	1990996	Gene ID= novel_gene_chr12_128 TPM= 3.19 Transcript Type= NA
chr12	2017091	2019479	2017091	2019479	+	transcript139.chr12.nnic@NA	transcript139.chr12.nnic	NA	2017091	2019479	Gene ID= novel_gene_chr12_140 TPM= 2.12 Transcript Type= NA
chr12	2022465	2027366	2022465	2027366	-	transcript145.chr12.nnic@NA	transcript145.chr12.nnic	NA	2022465	2027366	Gene ID= novel_gene_chr12_146 TPM= 2.12 Transcript Type= NA
chr12	2126123	2128518	2126123	2128518	-	transcript147.chr12.nnic@NA	transcript147.chr12.nnic	NA	2126123	2128518	Gene ID= novel_gene_chr12_148 TPM= 2.12 Transcript Type= NA
chr12	2130195	2133456	2130195	2133456	-	transcript155.chr12.nnic@NA	transcript155.chr12.nnic	NA	2130195	2133456	Gene ID= novel_gene_chr12_156 TPM= 12.75 Transcript Type= NA
chr12	2147791	2152675	2147791	2152675	+	transcript129.chr12.nnic@NA	transcript129.chr12.nnic	NA	2147791	2152675	Gene ID= novel_gene_chr12_130 TPM= 2.12 Transcript Type= NA
chr12	2155384	2158757	2155384	2158757	+	transcript131.chr12.nnic@NA	transcript131.chr12.nnic	NA	2155384	2158757	Gene ID= novel_gene_chr12_132 TPM= 4.25 Transcript Type= NA
chr12	2211716	2215958	2211716	2215958	-	transcript151.chr12.nnic@NA	transcript151.chr12.nnic	NA	2211716	2215958	Gene ID= novel_gene_chr12_152 TPM= 45.67 Transcript Type= NA
chr12	2232229	2236122	2232229	2236122	-	transcript143.chr12.nnic@NA	transcript143.chr12.nnic	NA	2232229	2236122	Gene ID= novel_gene_chr12_144 TPM= 71.16 Transcript Type= NA
chr12	2249774	2254863	2249774	2254863	-	transcript153.chr12.nnic@NA	transcript153.chr12.nnic	NA	2249774	2254863	Gene ID= novel_gene_chr12_154 TPM= 3.19 Transcript Type= NA
chr12	2252866	2256089	2252866	2256089	-	transcript141.chr12.nnic@NA	transcript141.chr12.nnic	NA	2252866	2256089	Gene ID= novel_gene_chr12_142 TPM= 24.43 Transcript Type= NA
chr12	2259544	2262972	2259544	2262972	+	transcript133.chr12.nnic@NA	transcript133.chr12.nnic	NA	2259544	2262972	Gene ID= novel_gene_chr12_134 TPM= 5.31 Transcript Type= NA
chr12	2268596	2271744	2268596	2271744	+	transcript135.chr12.nnic@NA	transcript135.chr12.nnic	NA	2268596	2271744	Gene ID= novel_gene_chr12_136 TPM= 2.12 Transcript Type= NA
chr12	2283022	2286867	2283022	2286867	-	transcript161.chr12.nnic@NA	transcript161.chr12.nnic	NA	2283022	2286867	Gene ID= novel_gene_chr12_162 TPM= 3.19 Transcript Type= NA
chr12	2295040	2297866	2295040	2297866	+	transcript157.chr12.nnic@NA	transcript157.chr12.nnic	NA	2295040	2297866	Gene ID= novel_gene_chr12_158 TPM= 4.25 Transcript Type= NA
chr12	2306802	2309684	2306802	2309684	+	transcript159.chr12.nnic@NA	transcript159.chr12.nnic	NA	2306802	2309684	Gene ID= novel_gene_chr12_160 TPM= 3.19 Transcript Type= NA
chr12	2323828	2330869	2323828	2330869	+	transcript163.chr12.nnic@NA	transcript163.chr12.nnic	NA	2323828	2330869	Gene ID= novel_gene_chr12_164 TPM= 9.56 Transcript Type= NA
chr12	2332845	2335448	2332845	2335448	+	transcript165.chr12.nnic@NA	transcript165.chr12.nnic	NA	2332845	2335448	Gene ID= novel_gene_chr12_166 TPM= 3.19 Transcript Type= NA
chr12	2357654	2360161	2357654	2360161	-	transcript171.chr12.nnic@NA	transcript171.chr12.nnic	NA	2357654	2360161	Gene ID= novel_gene_chr12_172 TPM= 3.19 Transcript Type= NA
chr12	2359540	2361824	2359540	2361824	-	transcript169.chr12.nnic@NA	transcript169.chr12.nnic	NA	2359540	2361824	Gene ID= novel_gene_chr12_170 TPM= 7.44 Transcript Type= NA
chr12	2363220	2367973	2363220	2367973	+	transcript167.chr12.nnic@NA	transcript167.chr12.nnic	NA	2363220	2367973	Gene ID= novel_gene_chr12_168 TPM= 6.37 Transcript Type= NA
chr12	2369405	2372311	2369405	2372311	-	transcript177.chr12.nnic@NA	transcript177.chr12.nnic	NA	2369405	2372311	Gene ID= novel_gene_chr12_178 TPM= 2.12 Transcript Type= NA
chr12	2376628	2380042	2376628	2380042	+	transcript173.chr12.nnic@NA	transcript173.chr12.nnic	NA	2376628	2380042	Gene ID= novel_gene_chr12_174 TPM= 4.25 Transcript Type= NA
chr12	2385804	2387487	2385804	2387487	+	transcript175.chr12.nnic@NA	transcript175.chr12.nnic	NA	2385804	2387487	Gene ID= novel_gene_chr12_176 TPM= 4.25 Transcript Type= NA
chr12	2408496	2411779	2408496	2411779	-	transcript181.chr12.nnic@NA	transcript181.chr12.nnic	NA	2408496	2411779	Gene ID= novel_gene_chr12_182 TPM= 18.06 Transcript Type= NA
chr12	2418442	2421922	2418442	2421922	+	transcript179.chr12.nnic@NA	transcript179.chr12.nnic	NA	2418442	2421922	Gene ID= novel_gene_chr12_180 TPM= 3.19 Transcript Type= NA
chr12	2439716	2444765	2439716	2444765	-	transcript183.chr12.nnic@NA	transcript183.chr12.nnic	NA	2439716	2444765	Gene ID= novel_gene_chr12_184 TPM= 3.19 Transcript Type= NA
chr12	2681423	2692159	2681423	2692159	+	transcript188.chr12.nic@CACNA1C	transcript188.chr12.nic	protein_coding	2681423,2685736,2686166,2688447,2690900	2682678,2685842,2686269,2688779,2692159	Gene ID= ENSG00000151067.21 TPM= 12.75 Transcript Type= NA
chr12	2608466	2614971	2608466	2614971	+	transcript192.chr12.nic@CACNA1C	transcript192.chr12.nic	protein_coding	2608466,2610541,2611903	2608712,2610699,2614971	Gene ID= ENSG00000151067.21 TPM= 2.12 Transcript Type= NA
chr12	2459171	2462402	2459171	2462402	-	transcript208.chr12.nnic@NA	transcript208.chr12.nnic	NA	2459171	2462402	Gene ID= novel_gene_chr12_209 TPM= 14.87 Transcript Type= NA
chr12	2499471	2501057	2499471	2501057	+	transcript196.chr12.nnic@NA	transcript196.chr12.nnic	NA	2499471	2501057	Gene ID= novel_gene_chr12_197 TPM= 3.19 Transcript Type= NA
chr12	2514258	2518456	2514258	2518456	+	transcript198.chr12.nnic@NA	transcript198.chr12.nnic	NA	2514258	2518456	Gene ID= novel_gene_chr12_199 TPM= 3.19 Transcript Type= NA
chr12	2532733	2535393	2532733	2535393	+	transcript200.chr12.nnic@NA	transcript200.chr12.nnic	NA	2532733	2535393	Gene ID= novel_gene_chr12_201 TPM= 2.12 Transcript Type= NA
chr12	2545214	2547946	2545214	2547946	-	transcript206.chr12.nnic@NA	transcript206.chr12.nnic	NA	2545214	2547946	Gene ID= novel_gene_chr12_207 TPM= 5.31 Transcript Type= NA
chr12	2621232	2625793	2621232	2625793	+	transcript194.chr12.nnic@NA	transcript194.chr12.nnic	NA	2621232	2625793	Gene ID= novel_gene_chr12_195 TPM= 18.06 Transcript Type= NA
chr12	2634731	2636361	2634731	2636361	+	transcript202.chr12.nnic@NA	transcript202.chr12.nnic	NA	2634731	2636361	Gene ID= novel_gene_chr12_203 TPM= 3.19 Transcript Type= NA
chr12	2687540	2691049	2687540	2691049	-	transcript212.chr12.nnic@NA	transcript212.chr12.nnic	NA	2687540	2691049	Gene ID= novel_gene_chr12_213 TPM= 7.44 Transcript Type= NA
chr12	2805134	2812381	2805134	2812381	-	ENST00000552469.1@ITFG2-AS1	ENST00000552469.1	antisense_RNA	2812219,2805134	2812381,2805317	Gene ID= ENSG00000258325.2 TPM= 1.06 Transcript Type= antisense_RNA
chr12	2812622	2832216	2812622	2832216	+	transcript214.chr12.nnic@ITFG2	transcript214.chr12.nnic	protein_coding	2812622,2817223,2817909,2818106,2820086,2820724,2821262,2821543,2821692,2822794,2823770,2824090,2830834,2831932	2812856,2817318,2817950,2818277,2820225,2820872,2821359,2821596,2821792,2822911,2823943,2824252,2830885,2832216	Gene ID= ENSG00000111203.11 TPM= 2.47 Transcript Type= NA
chr12	2812622	2825071	2812622	2825071	+	ENST00000228799.6@ITFG2	ENST00000228799.6	protein_coding	2812622,2817223,2817909,2818106,2820086,2820724,2821262,2821543,2821692,2822794,2823770,2824090	2812856,2817318,2817950,2818277,2820225,2820872,2821359,2821596,2821792,2822911,2823943,2825071	Gene ID= ENSG00000111203.11 TPM= 3.54 Transcript Type= protein_coding
chr12	2812622	2824941	2812622	2824941	+	transcript223.chr12.nic@ITFG2	transcript223.chr12.nic	protein_coding	2812622,2817223,2817909,2818106,2820086,2820724,2821262,2821543,2821692,2822794,2823770,2824090	2812856,2817318,2817950,2818277,2820225,2820872,2821359,2821596,2821792,2822911,2824013,2824941	Gene ID= ENSG00000111203.11 TPM= 5.66 Transcript Type= NA
chr12	2825348	2835024	2825348	2835024	-	ENST00000337508.8@NRIP2	ENST00000337508.8	protein_coding	2834642,2830708,2828332,2827926,2827625,2825348	2835024,2830860,2828414,2828047,2827677,2827299	Gene ID= ENSG00000053702.14 TPM= 2.12 Transcript Type= protein_coding
chr12	2877208	2889440	2877208	2889440	+	ENST00000464682.2@RHNO1	ENST00000464682.2	protein_coding	2877208,2887911	2877282,2889440	Gene ID= ENSG00000171792.10 TPM= 1.59 Transcript Type= processed_transcript
chr12	2877215	2889460	2877215	2889460	+	ENST00000489288.6@RHNO1	ENST00000489288.6	protein_coding	2877215,2885283,2887911	2877282,2885534,2889460	Gene ID= ENSG00000171792.10 TPM= 6.9 Transcript Type= protein_coding
chr12	2890897	2941140	2890897	2941140	+	ENST00000448120.6@TULP3	ENST00000448120.6	protein_coding	2890897,2909529,2920763,2922262,2930248,2931037,2933418,2934447,2937631,2938114,2939311	2890988,2909580,2920922,2922402,2930345,2931240,2933530,2934561,2937729,2938285,2941140	Gene ID= ENSG00000078246.16 TPM= 4.25 Transcript Type= protein_coding
chr12	2959305	3040665	2959305	3040665	+	transcript257.chr12.nnic@TEAD4	transcript257.chr12.nnic	protein_coding	2959305,2994738,3011004,3012170,3017398,3018545,3019115,3020634,3021844,3037968,3040107,3040365	2959481,2994992,3011068,3012232,3017526,3018588,3019170,3020773,3022017,3038108,3040259,3040665	Gene ID= ENSG00000197905.8 TPM= 6.43 Transcript Type= NA
chr12	2959573	3040665	2959573	3040665	+	transcript258.chr12.nic@TEAD4	transcript258.chr12.nic	protein_coding	2959573,2994738,3011004,3012170,3017398,3018545,3019115,3020634,3021844,3037968,3040107,3040365	2960040,2994992,3011068,3012232,3017526,3018588,3019170,3020773,3022017,3038108,3040259,3040665	Gene ID= ENSG00000197905.8 TPM= 21.3 Transcript Type= NA
chr12	2959897	3040665	2959897	3040665	+	transcript259.chr12.nic@TEAD4	transcript259.chr12.nic	protein_coding	2959897,2994738,3011004,3012170,3017398,3018545,3019115,3020634,3021844,3037968,3040107,3040365	2960353,2994992,3011068,3012232,3017526,3018588,3019170,3020773,3022017,3038108,3040259,3040665	Gene ID= ENSG00000197905.8 TPM= 7.49 Transcript Type= NA
chr12	2959811	3040665	2959811	3040665	+	transcript261.chr12.nic@TEAD4	transcript261.chr12.nic	protein_coding	2959811,2994738,3011004,3012170,3018545,3019115,3020634,3021844,3037968,3040107,3040365	2960040,2994992,3011068,3012232,3018588,3019170,3020773,3022017,3038108,3040259,3040665	Gene ID= ENSG00000197905.8 TPM= 7.22 Transcript Type= NA
chr12	2959414	3040673	2959414	3040673	+	ENST00000359864.6@TEAD4	ENST00000359864.6	protein_coding	2959414,2959948,2994738,3011004,3012170,3017398,3018545,3019115,3020634,3021844,3037968,3040107,3040365	2959481,2960040,2994992,3011068,3012232,3017526,3018588,3019170,3020773,3022017,3038108,3040259,3040673	Gene ID= ENSG00000197905.8 TPM= 18.11 Transcript Type= protein_coding
chr12	3045670	3046023	3045670	3046023	+	transcript264.chr12.nnic@NA	transcript264.chr12.nnic	NA	3045670	3046023	Gene ID= novel_gene_chr12_265 TPM= 2.12 Transcript Type= NA
chr12	3077355	3286564	3077355	3286564	+	ENST00000537971.5@TSPAN9	ENST00000537971.5	protein_coding	3077355,3201177,3278421,3278992,3280382,3281198,3281734,3283045	3077453,3201256,3278612,3279066,3280483,3281329,3281817,3286564	Gene ID= ENSG00000011105.12 TPM= 68.86 Transcript Type= protein_coding
chr12	3200531	3286559	3200531	3286559	+	transcript273.chr12.nnic@TSPAN9	transcript273.chr12.nnic	protein_coding	3200531,3278421,3278992,3280382,3281198,3281734,3283045,3285419	3201256,3278612,3279066,3280483,3281329,3281817,3283246,3286559	Gene ID= ENSG00000011105.12 TPM= 49.39 Transcript Type= NA
chr12	3200338	3283673	3200338	3283673	+	transcript274.chr12.nic@TSPAN9	transcript274.chr12.nic	protein_coding	3200338,3206280,3278421,3278992,3280382,3281198,3281734,3283045	3201256,3206418,3278612,3279066,3280483,3281329,3281817,3283673	Gene ID= ENSG00000011105.12 TPM= 5.49 Transcript Type= NA
chr12	3200327	3283673	3200327	3283673	+	transcript276.chr12.nic@TSPAN9	transcript276.chr12.nic	protein_coding	3200327,3278421,3278992,3280382,3281198,3281734,3283045	3201256,3278612,3279066,3280483,3281329,3281817,3283673	Gene ID= ENSG00000011105.12 TPM= 25.67 Transcript Type= NA
chr12	3118258	3120463	3118258	3120463	-	transcript298.chr12.nnic@NA	transcript298.chr12.nnic	NA	3118258	3120463	Gene ID= novel_gene_chr12_299 TPM= 11.68 Transcript Type= NA
chr12	3200348	3202228	3200348	3202228	-	transcript300.chr12.nnic@NA	transcript300.chr12.nnic	NA	3200348	3202228	Gene ID= novel_gene_chr12_301 TPM= 4.6 Transcript Type= NA
chr12	3209902	3211520	3209902	3211520	-	transcript302.chr12.nnic@NA	transcript302.chr12.nnic	NA	3209902	3211520	Gene ID= novel_gene_chr12_303 TPM= 4.25 Transcript Type= NA
chr12	3211663	3211917	3211663	3211917	-	ENST00000495392.1@AC005912.1	ENST00000495392.1	processed_pseudogene	3211663	3211917	Gene ID= ENSG00000227081.5 TPM= 1.06 Transcript Type= processed_pseudogene
chr12	3216880	3219863	3216880	3219863	+	transcript284.chr12.nnic@NA	transcript284.chr12.nnic	NA	3216880	3219863	Gene ID= novel_gene_chr12_285 TPM= 6.37 Transcript Type= NA
chr12	3220107	3221179	3220107	3221179	-	transcript304.chr12.nnic@NA	transcript304.chr12.nnic	NA	3220107	3221179	Gene ID= novel_gene_chr12_305 TPM= 2.12 Transcript Type= NA
chr12	3221362	3225048	3221362	3225048	-	transcript292.chr12.nnic@NA	transcript292.chr12.nnic	NA	3221362	3225048	Gene ID= novel_gene_chr12_293 TPM= 39.3 Transcript Type= NA
chr12	3226796	3231729	3226796	3231729	-	transcript290.chr12.nnic@NA	transcript290.chr12.nnic	NA	3226796	3231729	Gene ID= novel_gene_chr12_291 TPM= 78.6 Transcript Type= NA
chr12	3231039	3233589	3231039	3233589	+	transcript288.chr12.nnic@NA	transcript288.chr12.nnic	NA	3231039	3233589	Gene ID= novel_gene_chr12_289 TPM= 4.25 Transcript Type= NA
chr12	3248641	3250226	3248641	3250226	-	transcript296.chr12.nnic@NA	transcript296.chr12.nnic	NA	3248641	3250226	Gene ID= novel_gene_chr12_297 TPM= 4.25 Transcript Type= NA
chr12	3270427	3271557	3270427	3271557	+	transcript286.chr12.nnic@NA	transcript286.chr12.nnic	NA	3270427	3271557	Gene ID= novel_gene_chr12_287 TPM= 2.12 Transcript Type= NA
chr12	3808861	3873372	3808861	3873372	-	transcript309.chr12.nic@PARP11	transcript309.chr12.nic	protein_coding	3873212,3863836,3829890,3828910,3826158,3822085,3821873,3814037,3808861	3873372,3863957,3830018,3829030,3826233,3822157,3822003,3814188,3812439	Gene ID= ENSG00000111224.13 TPM= 3.19 Transcript Type= NA
chr12	3808861	3873374	3808861	3873374	-	ENST00000228820.8@PARP11	ENST00000228820.8	protein_coding	3873212,3829890,3828910,3826158,3822085,3821873,3814037,3808861	3873374,3830018,3829030,3826233,3822157,3822003,3814188,3812439	Gene ID= ENSG00000111224.13 TPM= 1.06 Transcript Type= protein_coding
chr12	4248765	4276184	4248765	4276184	-	ENST00000539135.1@CCND2-AS1	ENST00000539135.1	antisense_RNA	4276059,4248765	4276184,4249193	Gene ID= ENSG00000256164.1 TPM= 2.12 Transcript Type= antisense_RNA
chr12	4273772	4305350	4273772	4305350	+	ENST00000261254.7@CCND2	ENST00000261254.7	protein_coding	4273772,4276005,4278760,4288842,4299860	4274235,4276220,4278919,4288990,4305350	Gene ID= ENSG00000118971.7 TPM= 745.64 Transcript Type= protein_coding
chr12	4299262	4300120	4299262	4300120	-	transcript329.chr12.nnic@NA	transcript329.chr12.nnic	NA	4299262	4300120	Gene ID= novel_gene_chr12_330 TPM= 2.12 Transcript Type= NA
chr12	4321205	4354593	4321205	4354593	+	ENST00000179259.5@TIGAR	ENST00000179259.5	protein_coding	4321205,4331280,4337039,4349819,4351267,4352260	4321303,4331317,4337160,4349896,4351377,4354593	Gene ID= ENSG00000078237.6 TPM= 3.19 Transcript Type= protein_coding
chr12	4489415	4538508	4489415	4538508	-	ENST00000545746.5@C12orf4	ENST00000545746.5	protein_coding	4538409,4536017,4534157,4529869,4525484,4525254,4518774,4518058,4517061,4505306,4500138,4491177,4490522,4489415	4538508,4536211,4534302,4530050,4525583,4525375,4518880,4518255,4517189,4505380,4500340,4491234,4490589,4489899	Gene ID= ENSG00000047621.11 TPM= 2.12 Transcript Type= protein_coding
chr12	4604903	4613888	4604903	4613888	+	transcript343.chr12.nic@DYRK4	transcript343.chr12.nic	protein_coding	4604903,4607327,4610155,4612543,4613512	4605086,4607387,4610284,4612718,4613888	Gene ID= ENSG00000010219.13 TPM= 2.66 Transcript Type= NA
chr12	4604887	4613888	4604887	4613888	+	transcript346.chr12.nic@DYRK4	transcript346.chr12.nic	protein_coding	4604887,4610155,4612543,4613512	4605086,4610284,4612718,4613888	Gene ID= ENSG00000010219.13 TPM= 2.66 Transcript Type= NA
chr12	4604897	4613873	4604897	4613873	+	ENST00000545571.5@DYRK4	ENST00000545571.5	protein_coding	4604897,4610155,4612543,4613515	4605086,4610284,4612718,4613873	Gene ID= ENSG00000010219.13 TPM= 5.31 Transcript Type= retained_intron
chr12	4605731	4609021	4605731	4609021	-	transcript350.chr12.nnic@NA	transcript350.chr12.nnic	NA	4605731	4609021	Gene ID= novel_gene_chr12_351 TPM= 30.8 Transcript Type= NA
chr12	4615508	4649047	4615508	4649047	-	ENST00000545990.6@AKAP3	ENST00000545990.6	protein_coding	4648767,4645055,4641899,4638101,4626496,4615508	4649047,4645192,4642004,4638196,4628805,4615894	Gene ID= ENSG00000111254.7 TPM= 1.06 Transcript Type= protein_coding
chr12	4649107	4694317	4649107	4694317	+	ENST00000266544.9@NDUFA9	ENST00000266544.9	protein_coding	4649107,4654292,4654825,4657748,4659036,4662533,4668457,4669741,4682205,4685259,4686938	4649175,4654462,4654922,4657839,4659177,4662635,4668524,4669817,4682300,4685325,4694317	Gene ID= ENSG00000139180.10 TPM= 5.31 Transcript Type= protein_coding
chr12	5043989	5046788	5043989	5046788	+	ENST00000252321.4@KCNA5	ENST00000252321.4	protein_coding	5043989	5046788	Gene ID= ENSG00000130037.4 TPM= 8.5 Transcript Type= protein_coding
chr12	5705182	5705289	5705182	5705289	+	transcript368.chr12.nnic@NA	transcript368.chr12.nnic	NA	5705182	5705289	Gene ID= novel_gene_chr12_369 TPM= 2.12 Transcript Type= NA
chr12	5948874	6124675	5948874	6124675	-	ENST00000261405.9@VWF	ENST00000261405.9	protein_coding	6124421,6123142,6121174,6110866,6110374,6095460,6075335,6073619,6072331,6071297,6065137,6064246,6062954,6057849,6056857,6052543,6046723,6044291,6036388,6034688,6031444,6029342,6025906,6025580,6023631,6022740,6021900,6018365,6016754,6016516,6016089,6013481,6012087,6011617,5996002,5994415,5993862,5991819,5985563,5985045,5983150,5981786,5976111,5971599,5969211,5968127,5967486,5953496,5952391,5951844,5949786,5948874	6124675,6123196,6121338,6110968,6110582,6095584,6075551,6073741,6072442,6071343,6065273,6064384,6063054,6058044,6057072,6052783,6046817,6044451,6036491,6034826,6031578,6029488,6026046,6025693,6023787,6022898,6022035,6019743,6016870,6016656,6016232,6013645,6012130,6011794,5996222,5994607,5994203,5992018,5985665,5985119,5983254,5981991,5976260,5971709,5969391,5968167,5967602,5953594,5952519,5951883,5949883,5949203	Gene ID= ENSG00000110799.13 TPM= 272.98 Transcript Type= protein_coding
chr12	6199715	6238261	6199715	6238261	+	ENST00000382518.5@CD9	ENST00000382518.5	protein_coding	6199715,6200422,6225426,6232632,6233412,6235229,6235476,6236192,6237763	6200072,6200565,6225534,6232729,6233486,6235327,6235565,6236275,6238261	Gene ID= ENSG00000010278.12 TPM= 27.62 Transcript Type= protein_coding
chr12	6200316	6238271	6200316	6238271	+	ENST00000610354.4@CD9	ENST00000610354.4	protein_coding	6200316,6225426,6232632,6233412,6235229,6235475,6236192,6237763	6200565,6225534,6232729,6233486,6235327,6235565,6236275,6238271	Gene ID= ENSG00000010278.12 TPM= 81.79 Transcript Type= protein_coding
chr12	6200388	6201875	6200388	6201875	+	transcript385.chr12.nnic@NA	transcript385.chr12.nnic	NA	6200388	6201875	Gene ID= novel_gene_chr12_386 TPM= 2.12 Transcript Type= NA
chr12	6235767	6238258	6235767	6238258	+	transcript387.chr12.nnic@NA	transcript387.chr12.nnic	NA	6235767	6238258	Gene ID= novel_gene_chr12_388 TPM= 2.12 Transcript Type= NA
chr12	6328757	6342114	6328757	6342114	-	ENST00000162749.6@TNFRSF1A	ENST00000162749.6	protein_coding	6341776,6334091,6333737,6333367,6333069,6330853,6330598,6330267,6329778,6328757	6342114,6334244,6333865,6333516,6333147,6330926,6330711,6330295,6330066,6329622	Gene ID= ENSG00000067182.7 TPM= 35.58 Transcript Type= protein_coding
chr12	6328757	6342114	6328757	6342114	-	ENST00000534885.5@TNFRSF1A	ENST00000534885.5	protein_coding	6341776,6333737,6333367,6333069,6330853,6330598,6330267,6329778,6328757	6342114,6333865,6333516,6333147,6330926,6330711,6330295,6330066,6329622	Gene ID= ENSG00000067182.7 TPM= 6.9 Transcript Type= nonsense_mediated_decay
chr12	6340100	6342009	6340100	6342009	-	transcript393.chr12.nnic@NA	transcript393.chr12.nnic	NA	6340100	6342009	Gene ID= novel_gene_chr12_394 TPM= 2.12 Transcript Type= NA
chr12	6384033	6391563	6384033	6391563	+	ENST00000228918.8@LTBR	ENST00000228918.8	protein_coding	6384033,6384588,6385022,6385227,6386066,6386347,6388398,6388800,6390112,6390660	6384454,6384684,6385147,6385379,6386162,6386444,6388505,6388825,6390340,6391563	Gene ID= ENSG00000111321.10 TPM= 53.11 Transcript Type= protein_coding
chr12	6439161	6451567	6439161	6451567	-	ENST00000545339.5@CD27-AS1	ENST00000545339.5	processed_transcript	6451469,6450341,6448640,6448037,6446961,6443546,6439161	6451567,6450980,6448737,6448150,6447087,6443717,6439676	Gene ID= ENSG00000215039.6 TPM= 2.66 Transcript Type= antisense_RNA
chr12	6439165	6451523	6439165	6451523	-	transcript402.chr12.nnic@CD27-AS1	transcript402.chr12.nnic	processed_transcript	6451469,6450893,6448640,6448037,6446961,6443546,6439165	6451523,6450980,6448737,6448150,6447087,6443717,6439676	Gene ID= ENSG00000215039.6 TPM= 3.72 Transcript Type= NA
chr12	6447616	6451545	6447616	6451545	-	transcript407.chr12.nnic@CD27-AS1	transcript407.chr12.nnic	processed_transcript	6451469,6448640,6447616	6451545,6448737,6448150	Gene ID= ENSG00000215039.6 TPM= 2.12 Transcript Type= NA
chr12	6447616	6451515	6447616	6451515	-	ENST00000504270.2@CD27-AS1	ENST00000504270.2	processed_transcript	6451469,6448640,6447616	6451515,6448757,6448150	Gene ID= ENSG00000215039.6 TPM= 2.12 Transcript Type= retained_intron
chr12	6452084	6462318	6452084	6462318	+	ENST00000266556.7@TAPBPL	ENST00000266556.7	protein_coding	6452084,6453067,6453447,6457406,6458645,6460855,6462034	6452312,6453297,6453716,6457744,6458947,6460938,6462318	Gene ID= ENSG00000139192.11 TPM= 23.37 Transcript Type= protein_coding
chr12	6452486	6462277	6452486	6462277	+	ENST00000543567.5@TAPBPL	ENST00000543567.5	protein_coding	6452486,6453067,6453447,6457406,6458645,6460855,6462034	6452619,6453297,6453716,6457744,6458947,6460938,6462277	Gene ID= ENSG00000139192.11 TPM= 1.06 Transcript Type= processed_transcript
chr12	6459782	6462835	6459782	6462835	-	transcript418.chr12.nnic@NA	transcript418.chr12.nnic	NA	6459782	6462835	Gene ID= novel_gene_chr12_419 TPM= 3.19 Transcript Type= NA
chr12	6462237	6470987	6462237	6470987	-	ENST00000361716.7@VAMP1	ENST00000361716.7	protein_coding	6470530,6466225,6465842,6462237	6470987,6466351,6466000,6464941	Gene ID= ENSG00000139190.16 TPM= 3.19 Transcript Type= protein_coding
chr12	6491886	6493598	6491886	6493598	-	ENST00000229238.4@MRPL51	ENST00000229238.4	protein_coding	6493058,6492862,6491886	6493598,6492972,6492467	Gene ID= ENSG00000111639.7 TPM= 60.89 Transcript Type= protein_coding
chr12	6492147	6493840	6492147	6493840	-	ENST00000543164.5@MRPL51	ENST00000543164.5	protein_coding	6493459,6492862,6492147	6493840,6492972,6492467	Gene ID= ENSG00000111639.7 TPM= 3.54 Transcript Type= protein_coding
chr12	6492103	6493841	6492103	6493841	-	ENST00000537701.5@MRPL51	ENST00000537701.5	protein_coding	6493717,6492862,6492103	6493841,6492972,6492467	Gene ID= ENSG00000111639.7 TPM= 2.47 Transcript Type= protein_coding
chr12	6493379	6531955	6493379	6531955	+	ENST00000315579.9@NCAPD2	ENST00000315579.9	protein_coding	6493379,6495076,6509717,6510075,6510629,6511110,6514265,6514464,6514773,6516828,6517365,6517596,6517779,6520986,6521798,6522828,6523262,6525583,6526068,6526287,6526448,6526891,6527777,6527968,6528173,6528679,6528945,6529513,6529775,6530691,6530921,6531327	6494154,6495225,6509792,6510133,6510810,6511252,6514392,6514587,6514920,6517025,6517499,6517683,6517959,6521110,6522037,6523002,6523346,6525716,6526200,6526371,6526615,6527063,6527888,6528091,6528328,6528856,6529039,6529593,6529958,6530817,6531076,6531955	Gene ID= ENSG00000010292.12 TPM= 13.81 Transcript Type= protein_coding
chr12	6533927	6538371	6533927	6538371	+	ENST00000229239.9@GAPDH	ENST00000229239.9	protein_coding	6533927,6534810,6536494,6536684,6536920,6537101,6537309,6537584,6538101	6534569,6534861,6536593,6536790,6537010,6537216,6537390,6537996,6538371	Gene ID= ENSG00000111640.14 TPM= 7503.42 Transcript Type= protein_coding
chr12	6534534	6538359	6534534	6538359	+	ENST00000396861.5@GAPDH	ENST00000396861.5	protein_coding	6534534,6534810,6536494,6536684,6536920,6537101,6537309,6537584,6538101	6534661,6534861,6536593,6536790,6537010,6537216,6537390,6537996,6538359	Gene ID= ENSG00000111640.14 TPM= 36.56 Transcript Type= protein_coding
chr12	6534532	6538340	6534532	6538340	+	ENST00000396856.5@GAPDH	ENST00000396856.5	protein_coding	6534532,6534810,6536494,6536684,6536920,6537101,6537309,6537584,6538101	6534569,6534861,6536593,6536817,6537010,6537216,6537390,6537996,6538340	Gene ID= ENSG00000111640.14 TPM= 3.41 Transcript Type= protein_coding
chr12	6534754	6538339	6534754	6538339	+	ENST00000396859.5@GAPDH	ENST00000396859.5	protein_coding	6534754,6536494,6536684,6536920,6537101,6537309,6537584,6538101	6534861,6536593,6536790,6537010,6537216,6537390,6537996,6538339	Gene ID= ENSG00000111640.14 TPM= 25.62 Transcript Type= protein_coding
chr12	6539528	6556071	6539528	6556071	-	ENST00000487279.6@IFFO1	ENST00000487279.6	protein_coding	6555257,6551398,6550941,6550695,6549756,6548668,6548425,6548065,6541512,6539528	6556071,6551503,6551001,6550790,6549896,6548825,6548545,6548160,6541642,6540588	Gene ID= ENSG00000010295.19 TPM= 2.3 Transcript Type= nonsense_mediated_decay
chr12	6539540	6556083	6539540	6556083	-	transcript492.chr12.nnic@IFFO1	transcript492.chr12.nnic	protein_coding	6555995,6555257,6550941,6550695,6549756,6548668,6548425,6548065,6541512,6539540	6556083,6555885,6551001,6550790,6549896,6548825,6548545,6548160,6541642,6540588	Gene ID= ENSG00000010295.19 TPM= 9.74 Transcript Type= NA
chr12	6539528	6556071	6539528	6556071	-	ENST00000396840.6@IFFO1	ENST00000396840.6	protein_coding	6555257,6550941,6550695,6549756,6548668,6548425,6548065,6541512,6539528	6556071,6551001,6550790,6549896,6548825,6548545,6548157,6541642,6540588	Gene ID= ENSG00000010295.19 TPM= 16.64 Transcript Type= protein_coding
chr12	6546684	6549200	6546684	6549200	+	transcript495.chr12.nnic@NA	transcript495.chr12.nnic	NA	6546684	6549200	Gene ID= novel_gene_chr12_496 TPM= 5.31 Transcript Type= NA
chr12	6556871	6568691	6556871	6568691	-	ENST00000541778.5@NOP2	ENST00000541778.5	protein_coding	6568207,6567816,6566777,6566529,6566101,6563891,6563614,6563315,6563081,6561884,6561664,6560931,6560698,6560447,6560098,6556871	6568691,6567922,6566822,6566617,6566324,6563946,6563771,6563514,6563170,6561971,6561804,6561070,6560787,6560569,6560326,6557642	Gene ID= ENSG00000111641.11 TPM= 7.44 Transcript Type= protein_coding
chr12	6556871	6568324	6556871	6568324	-	ENST00000322166.9@NOP2	ENST00000322166.9	protein_coding	6568207,6567816,6566777,6566529,6566101,6563891,6563614,6563315,6563081,6561884,6561664,6560931,6560698,6560447,6560098,6556871	6568324,6567922,6566822,6566617,6566336,6563946,6563771,6563514,6563170,6561971,6561804,6561070,6560787,6560569,6560326,6557642	Gene ID= ENSG00000111641.11 TPM= 11.68 Transcript Type= protein_coding
chr12	6556871	6568324	6556871	6568324	-	transcript499.chr12.nic@NOP2	transcript499.chr12.nic	protein_coding	6568207,6567816,6566777,6566101,6563891,6563614,6563315,6563081,6561884,6561664,6560931,6560698,6560447,6560098,6556871	6568324,6567922,6566822,6566617,6563946,6563771,6563514,6563170,6561971,6561804,6561070,6560787,6560569,6560326,6557642	Gene ID= ENSG00000111641.11 TPM= 5.31 Transcript Type= NA
chr12	6568410	6584739	6568410	6584739	+	transcript518.chr12.nnic@AC006064.2	transcript518.chr12.nnic	antisense_RNA	6568410,6578553,6582644	6569530,6578721,6584739	Gene ID= ENSG00000247853.2 TPM= 2.12 Transcript Type= NA
chr12	6578846	6607453	6578846	6607453	-	transcript509.chr12.nic@CHD4	transcript509.chr12.nic	protein_coding	6607300,6606274,6602376,6601960,6601648,6601289,6600926,6600534,6600217,6599773,6598222,6597894,6596006,6595334,6594459,6593416,6593091,6592696,6592393,6591916,6591694,6591466,6588298,6587712,6587384,6583198,6583027,6582848,6582615,6582137,6581649,6581291,6581044,6578846	6607453,6606451,6602497,6602154,6601766,6601530,6601053,6600669,6600395,6600012,6598425,6598099,6596137,6595430,6594650,6593616,6593228,6592817,6592566,6592057,6591825,6591583,6588422,6587949,6587559,6583378,6583113,6582936,6582748,6582281,6581814,6581388,6581173,6578917	Gene ID= ENSG00000111642.14 TPM= 25.84 Transcript Type= NA
chr12	6600535	6614164	6600535	6614164	-	transcript515.chr12.nnic@CHD4	transcript515.chr12.nnic	protein_coding	6614084,6607300,6606274,6602376,6601960,6601648,6601289,6600926,6600535	6614164,6607417,6606451,6602497,6602175,6601766,6601530,6601053,6600669	Gene ID= ENSG00000111642.14 TPM= 4.25 Transcript Type= NA
chr12	6570083	6607424	6570083	6607424	-	ENST00000544040.5@CHD4	ENST00000544040.5	protein_coding	6607300,6606274,6602376,6601960,6601648,6601289,6600926,6600534,6600217,6599773,6598222,6597894,6596006,6595334,6594459,6593416,6593091,6592696,6592393,6591916,6591694,6591466,6588298,6587712,6587384,6583198,6583027,6582848,6582615,6582137,6581649,6581291,6581044,6578846,6578409,6578029,6577785,6573074,6570869,6570083	6607424,6606451,6602497,6602154,6601766,6601530,6601053,6600669,6600395,6600012,6598425,6598099,6596137,6595430,6594650,6593616,6593228,6592817,6592566,6592057,6591825,6591583,6588422,6587949,6587559,6583378,6583113,6582936,6582748,6582281,6581814,6581388,6581173,6578917,6578546,6578137,6577917,6573269,6571032,6570693	Gene ID= ENSG00000111642.14 TPM= 34.34 Transcript Type= protein_coding
chr12	6570083	6607385	6570083	6607385	-	ENST00000357008.6@CHD4	ENST00000357008.6	protein_coding	6607300,6606274,6602376,6601960,6601648,6601289,6600926,6600534,6600217,6599773,6598222,6597894,6596006,6595334,6594459,6593416,6593091,6592696,6592393,6591916,6591694,6591466,6588298,6587712,6587384,6583198,6583027,6582848,6582615,6582137,6581649,6581291,6581044,6578846,6578409,6578029,6577785,6573074,6570869,6570083	6607385,6606451,6602497,6602175,6601766,6601530,6601053,6600669,6600395,6600012,6598425,6598099,6596137,6595430,6594650,6593616,6593228,6592817,6592566,6592057,6591825,6591583,6588422,6587949,6587559,6583378,6583113,6582936,6582748,6582281,6581814,6581388,6581173,6578917,6578546,6578137,6577917,6573269,6571032,6570693	Gene ID= ENSG00000111642.14 TPM= 30.09 Transcript Type= protein_coding
chr12	6618835	6631649	6618835	6631649	-	ENST00000431922.1@LPAR5	ENST00000431922.1	protein_coding	6631585,6618835	6631649,6621464	Gene ID= ENSG00000184574.9 TPM= 6.37 Transcript Type= protein_coding
chr12	6650280	6663148	6650280	6663148	-	ENST00000341550.8@ING4	ENST00000341550.8	protein_coding	6663065,6656727,6653230,6652936,6652662,6652271,6651324,6650280	6663148,6656798,6653396,6653050,6652767,6652418,6651385,6651234	Gene ID= ENSG00000111653.19 TPM= 15.93 Transcript Type= protein_coding
chr12	6650591	6663140	6650591	6663140	-	ENST00000396807.8@ING4	ENST00000396807.8	protein_coding	6663065,6656727,6653230,6652936,6652662,6652271,6651324,6650591	6663140,6656798,6653396,6653050,6652770,6652418,6651385,6651234	Gene ID= ENSG00000111653.19 TPM= 8.5 Transcript Type= protein_coding
chr12	6650539	6663142	6650539	6663142	-	ENST00000619641.4@ING4	ENST00000619641.4	protein_coding	6663065,6656727,6652936,6652662,6652271,6651324,6650539	6663142,6656798,6653050,6652770,6652418,6651385,6651234	Gene ID= ENSG00000111653.19 TPM= 1.06 Transcript Type= protein_coding
chr12	6650626	6663142	6650626	6663142	-	ENST00000446105.6@ING4	ENST00000446105.6	protein_coding	6663065,6656727,6653230,6652945,6652662,6652271,6651324,6650626	6663142,6656798,6653396,6653050,6652767,6652418,6651385,6651234	Gene ID= ENSG00000111653.19 TPM= 2.12 Transcript Type= protein_coding
chr12	6666730	6688947	6666730	6688947	-	transcript542.chr12.nic@ZNF384	transcript542.chr12.nic	protein_coding	6688167,6679455,6678946,6678663,6678127,6673216,6670760,6669031,6666730	6688947,6679525,6679183,6678710,6678460,6673440,6670838,6669189,6668115	Gene ID= ENSG00000126746.17 TPM= 4.25 Transcript Type= NA
chr12	6666730	6673437	6666730	6673437	-	transcript547.chr12.nnic@ZNF384	transcript547.chr12.nnic	protein_coding	6673308,6672350,6670760,6669031,6666730	6673437,6672441,6670838,6669189,6668115	Gene ID= ENSG00000126746.17 TPM= 6.37 Transcript Type= NA
chr12	6723741	6731856	6723741	6731856	+	ENST00000543155.5@COPS7A	ENST00000543155.5	protein_coding	6723741,6724614,6727926,6728223,6729247,6730402,6730669,6731000	6724179,6724818,6728001,6728311,6729449,6730507,6730820,6731856	Gene ID= ENSG00000111652.9 TPM= 112.76 Transcript Type= protein_coding
chr12	6724014	6731873	6724014	6731873	+	ENST00000626119.2@COPS7A	ENST00000626119.2	protein_coding	6724014,6724614,6728223,6729247,6730402,6730669,6731000	6724152,6724818,6728311,6729449,6730507,6730820,6731873	Gene ID= ENSG00000111652.9 TPM= 16.28 Transcript Type= protein_coding
chr12	6724079	6731828	6724079	6731828	+	ENST00000539735.5@COPS7A	ENST00000539735.5	protein_coding	6724079,6724614,6727926,6728223,6729247,6730402,6730669,6731000	6724250,6724818,6728001,6728311,6729449,6730507,6730820,6731828	Gene ID= ENSG00000111652.9 TPM= 35.2 Transcript Type= protein_coding
chr12	6724071	6731807	6724071	6731807	+	ENST00000229251.7@COPS7A	ENST00000229251.7	protein_coding	6724071,6724614,6727926,6728223,6729247,6730402,6730669,6731000	6724152,6724818,6728001,6728311,6729449,6730507,6730820,6731807	Gene ID= ENSG00000111652.9 TPM= 4.4 Transcript Type= protein_coding
chr12	6724082	6731832	6724082	6731832	+	ENST00000538410.5@COPS7A	ENST00000538410.5	protein_coding	6724082,6724614,6727926,6728223,6729247,6730402,6731000	6724179,6724818,6728001,6728311,6729449,6730507,6731832	Gene ID= ENSG00000111652.9 TPM= 1.06 Transcript Type= protein_coding
chr12	6724298	6731842	6724298	6731842	+	ENST00000534877.5@COPS7A	ENST00000534877.5	protein_coding	6724298,6724614,6727926,6728223,6729247,6730402,6730669,6731000	6724330,6724818,6728001,6728311,6729449,6730507,6730820,6731842	Gene ID= ENSG00000111652.9 TPM= 1.21 Transcript Type= protein_coding
chr12	6724287	6731875	6724287	6731875	+	ENST00000534947.5@COPS7A	ENST00000534947.5	protein_coding	6724287,6727926,6728223,6729247,6730402,6730669,6731000	6724818,6728001,6728311,6729449,6730507,6730820,6731875	Gene ID= ENSG00000111652.9 TPM= 4.6 Transcript Type= protein_coding
chr12	6747996	6753555	6747996	6753555	-	ENST00000203630.9@MLF2	ENST00000203630.9	protein_coding	6752939,6752285,6751925,6751641,6750713,6750177,6749848,6748770,6747996	6753555,6752362,6752054,6751676,6750766,6750305,6750007,6748982,6748547	Gene ID= ENSG00000089693.10 TPM= 265.72 Transcript Type= protein_coding
chr12	6789472	6820808	6789472	6820808	+	ENST00000011653.8@CD4	ENST00000011653.8	protein_coding	6789472,6800072,6800307,6814142,6814759,6816056,6817130,6818421,6818847,6819299	6789662,6800187,6800471,6814300,6814992,6816403,6817330,6818542,6818914,6820808	Gene ID= ENSG00000010610.9 TPM= 4.25 Transcript Type= protein_coding
chr12	6821545	6827418	6821545	6827418	+	ENST00000311268.7@GPR162	ENST00000311268.7	protein_coding	6821545,6823468,6825484,6826196,6826653	6821900,6824765,6825673,6826353,6827418	Gene ID= ENSG00000250510.7 TPM= 3.19 Transcript Type= protein_coding
chr12	6828410	6839851	6828410	6839851	+	ENST00000290510.9@P3H3	ENST00000290510.9	protein_coding	6828410,6829859,6830353,6830639,6831216,6831825,6833592,6833742,6833925,6836985,6837423,6837732,6837958,6839000,6839297	6828938,6830011,6830554,6830770,6831352,6831914,6833644,6833809,6834049,6837086,6837573,6837849,6838033,6839140,6839851	Gene ID= ENSG00000110811.19 TPM= 14.87 Transcript Type= protein_coding
chr12	6840527	6847393	6840527	6847393	+	transcript617.chr12.nic@GNB3	transcript617.chr12.nic	protein_coding	6840527,6842970,6843174,6843363,6843632,6843777,6845586,6846792	6841624,6843076,6843237,6843525,6843698,6843978,6845802,6847393	Gene ID= ENSG00000111664.10 TPM= 5.31 Transcript Type= NA
chr12	6845367	6847352	6845367	6847352	+	ENST00000542751.1@GNB3	ENST00000542751.1	protein_coding	6845367,6846792	6845802,6847352	Gene ID= ENSG00000111664.10 TPM= 1.06 Transcript Type= retained_intron
chr12	6844095	6846671	6844095	6846671	-	transcript634.chr12.nnic@NA	transcript634.chr12.nnic	NA	6844095	6846671	Gene ID= novel_gene_chr12_635 TPM= 32.93 Transcript Type= NA
chr12	6852129	6866629	6852129	6866629	+	transcript599.chr12.nic@USP5	transcript599.chr12.nic	protein_coding	6852129,6855401,6855755,6856017,6856305,6856707,6857629,6858424,6859470,6860151,6860366,6860953,6861443,6862470,6863186,6863830,6864722,6865164,6865984	6852290,6855526,6855821,6856150,6856450,6856891,6857723,6858617,6859541,6860238,6860491,6861106,6861617,6862558,6863377,6864195,6864875,6865248,6866629	Gene ID= ENSG00000111667.13 TPM= 9.21 Transcript Type= NA
chr12	6852128	6866629	6852128	6866629	+	ENST00000229268.12@USP5	ENST00000229268.12	protein_coding	6852128,6855401,6855755,6856017,6856305,6856707,6857629,6858424,6859470,6860151,6860366,6860953,6861443,6862470,6863186,6863830,6864050,6864722,6865164,6865984	6852290,6855526,6855821,6856150,6856450,6856891,6857723,6858617,6859541,6860238,6860491,6861106,6861617,6862558,6863377,6863973,6864195,6864875,6865248,6866629	Gene ID= ENSG00000111667.13 TPM= 143.57 Transcript Type= protein_coding
chr12	6852148	6866620	6852148	6866620	+	ENST00000389231.9@USP5	ENST00000389231.9	protein_coding	6852148,6855401,6855755,6856017,6856305,6856707,6857629,6858424,6859470,6860151,6860366,6860953,6861443,6862470,6863186,6863830,6864050,6864722,6865164,6865984	6852290,6855526,6855821,6856150,6856450,6856891,6857723,6858617,6859541,6860238,6860491,6861106,6861617,6862558,6863308,6863973,6864195,6864875,6865248,6866620	Gene ID= ENSG00000111667.13 TPM= 30.98 Transcript Type= protein_coding
chr12	6867531	6870828	6867531	6870828	+	ENST00000396705.9@TPI1	ENST00000396705.9	protein_coding	6867531,6868864,6869099,6869258,6869688,6870049,6870265	6867681,6868987,6869183,6869390,6869773,6870136,6870828	Gene ID= ENSG00000111669.14 TPM= 1515.7 Transcript Type= protein_coding
chr12	6873227	6882304	6873227	6882304	+	transcript640.chr12.nic@RPL13P5	transcript640.chr12.nic	transcribed_processed_pseudogene	6873227,6882196	6873781,6882304	Gene ID= ENSG00000240370.6 TPM= 2.12 Transcript Type= NA
chr12	6904733	6914229	6904733	6914229	+	ENST00000007969.12@LRRC23	ENST00000007969.12	protein_coding	6904733,6905585,6905845,6906409,6907315,6909890,6912730,6913891	6904903,6905759,6905954,6906662,6907445,6910026,6913027,6914229	Gene ID= ENSG00000010626.14 TPM= 4.25 Transcript Type= protein_coding
chr12	6904808	6914228	6904808	6914228	+	transcript645.chr12.nic@LRRC23	transcript645.chr12.nic	protein_coding	6904808,6905585,6906409,6907315,6909890,6913891	6904903,6905759,6906662,6907445,6910026,6914228	Gene ID= ENSG00000010626.14 TPM= 2.12 Transcript Type= NA
chr12	6904791	6914194	6904791	6914194	+	ENST00000451681.5@LRRC23	ENST00000451681.5	protein_coding	6904791,6905585,6906409,6907315,6909890,6912730,6913891	6904903,6905759,6906662,6907445,6910026,6913027,6914194	Gene ID= ENSG00000010626.14 TPM= 10.62 Transcript Type= nonsense_mediated_decay
chr12	6904834	6914229	6904834	6914229	+	ENST00000428946.5@LRRC23	ENST00000428946.5	protein_coding	6904834,6905585,6906409,6907315,6913891	6904903,6905759,6906662,6907445,6914229	Gene ID= ENSG00000010626.14 TPM= 2.12 Transcript Type= nonsense_mediated_decay
chr12	6904841	6914228	6904841	6914228	+	ENST00000323702.9@LRRC23	ENST00000323702.9	protein_coding	6904841,6905585,6905845,6906409,6907315,6909890,6913891	6904903,6905759,6905954,6906662,6907445,6910026,6914228	Gene ID= ENSG00000010626.14 TPM= 1.06 Transcript Type= protein_coding
chr12	6914327	6923696	6914327	6923696	+	ENST00000541477.5@ENO2	ENST00000541477.5	protein_coding	6914327,6915818,6916417,6916671,6917038,6917581,6917940,6919566,6921581,6922056,6922344,6922731	6914659,6915917,6916512,6916729,6917107,6917714,6918162,6919763,6921782,6922164,6922402,6923696	Gene ID= ENSG00000111674.8 TPM= 60.01 Transcript Type= protein_coding
chr12	6914450	6923696	6914450	6923696	+	ENST00000229277.5@ENO2	ENST00000229277.5	protein_coding	6914450,6915821,6916417,6916671,6917038,6917581,6917940,6919566,6921581,6922056,6922344,6922731	6914659,6915917,6916512,6916729,6917107,6917714,6918162,6919763,6921782,6922164,6922402,6923696	Gene ID= ENSG00000111674.8 TPM= 45.14 Transcript Type= protein_coding
chr12	6924463	6942321	6924463	6942321	+	ENST00000356654.8@ATN1	ENST00000356654.8	protein_coding	6924463,6933840,6934176,6934465,6935547,6937845,6938481,6940880,6941374,6941747	6924537,6934028,6934313,6934578,6937561,6938067,6939177,6941023,6941554,6942321	Gene ID= ENSG00000111676.14 TPM= 78.6 Transcript Type= protein_coding
chr12	6944023	6946002	6944023	6946002	+	ENST00000229281.5@C12orf57	ENST00000229281.5	protein_coding	6944023,6944476,6945771	6944173,6944652,6946002	Gene ID= ENSG00000111678.10 TPM= 146.58 Transcript Type= protein_coding
chr12	6951269	6961313	6951269	6961313	+	ENST00000318974.13@PTPN6	ENST00000318974.13	protein_coding	6951269,6951609,6951983,6954805,6955151,6955372,6955660,6956142,6956419,6957654,6957919,6959927,6960088,6960344,6960806,6961126	6951520,6951731,6952177,6954994,6955267,6955485,6955756,6956221,6956568,6957785,6958073,6959994,6960239,6960435,6960945,6961313	Gene ID= ENSG00000111679.16 TPM= 2.12 Transcript Type= protein_coding
chr12	6965352	6970825	6965352	6970825	-	ENST00000535923.5@PHB2	ENST00000535923.5	protein_coding	6970417,6970196,6969498,6968411,6967892,6967676,6967171,6966424,6965911,6965352	6970825,6970280,6969577,6968595,6968021,6967779,6967248,6966500,6965916,6965712	Gene ID= ENSG00000215021.8 TPM= 29.21 Transcript Type= protein_coding
chr12	6965354	6970623	6965354	6970623	-	ENST00000399433.6@PHB2	ENST00000399433.6	protein_coding	6970417,6970196,6969498,6968411,6967892,6967676,6967171,6966423,6965354	6970623,6970280,6969577,6968595,6968021,6967779,6967248,6966500,6965714	Gene ID= ENSG00000215021.8 TPM= 17.53 Transcript Type= protein_coding
chr12	6970893	6979941	6970893	6979941	+	ENST00000599672.5@EMG1	ENST00000599672.5	protein_coding	6970893,6974339,6974552,6975090,6975229,6975696	6971091,6974440,6974693,6975148,6975378,6979941	Gene ID= ENSG00000126749.14 TPM= 29.74 Transcript Type= protein_coding
chr12	6976186	7018510	6976186	7018510	-	ENST00000261407.8@LPCAT3	ENST00000261407.8	protein_coding	7018274,6983432,6982676,6981811,6981595,6981004,6979471,6978603,6978341,6977598,6977367,6977134,6976186	7018510,6983539,6982782,6981904,6981632,6981182,6979579,6978689,6978507,6977745,6977525,6977262,6976891	Gene ID= ENSG00000111684.10 TPM= 31.86 Transcript Type= protein_coding
chr12	7060515	7071032	7060515	7071032	+	ENST00000328916.7@C1S	ENST00000328916.7	protein_coding	7060515,7061752,7062475,7062890,7064267,7065100,7065817,7066518,7067039,7067643,7068456,7069855	7060877,7061917,7062682,7063067,7064392,7065299,7065970,7066633,7067117,7067771,7068530,7071032	Gene ID= ENSG00000182326.14 TPM= 66.92 Transcript Type= protein_coding
chr12	7080209	7092607	7080209	7092607	-	ENST00000542285.5@C1R	ENST00000542285.5	protein_coding	7092387,7091452,7090056,7089587,7089293,7088839,7088610,7086379,7085861,7082032,7080209	7092607,7091680,7090248,7089733,7089489,7088986,7088731,7086457,7086016,7082106,7081301	Gene ID= ENSG00000159403.15 TPM= 41.42 Transcript Type= protein_coding
chr12	7094554	7109273	7094554	7109273	-	ENST00000266542.8@C1RL	ENST00000266542.8	protein_coding	7109110,7108251,7101898,7099901,7099686,7094554	7109273,7108479,7102087,7100026,7099760,7097163	Gene ID= ENSG00000139178.10 TPM= 4.25 Transcript Type= protein_coding
chr12	7097669	7099065	7097669	7099065	+	transcript690.chr12.nnic@NA	transcript690.chr12.nnic	NA	7097669	7099065	Gene ID= novel_gene_chr12_691 TPM= 6.37 Transcript Type= NA
chr12	7126989	7130526	7126989	7130526	-	transcript692.chr12.nnic@RBP5	transcript692.chr12.nnic	protein_coding	7129095,7126989	7130526,7129064	Gene ID= ENSG00000139194.7 TPM= 3.19 Transcript Type= NA
chr12	7189584	7211483	7189584	7211483	+	ENST00000266563.9@PEX5	ENST00000266563.9	protein_coding	7189584,7190362,7190888,7191226,7191569,7199011,7201751,7202612,7203432,7207659,7208010,7208457,7209005,7209683,7210022	7189750,7190524,7190923,7191358,7191700,7199113,7201841,7202704,7203551,7207802,7208080,7208669,7209170,7209840,7211483	Gene ID= ENSG00000139197.10 TPM= 3.19 Transcript Type= protein_coding
chr12	7470813	7503893	7470813	7503893	-	ENST00000359156.8@CD163	ENST00000359156.8	protein_coding	7503645,7502478,7501139,7498868,7496813,7495081,7487773,7487359,7486894,7486499,7485096,7483367,7482966,7482643,7481161,7479860,7470813	7503893,7502564,7501462,7499188,7497133,7495401,7488087,7487673,7486986,7486813,7485416,7483675,7483004,7482762,7481256,7479996,7471397	Gene ID= ENSG00000177575.12 TPM= 1.06 Transcript Type= protein_coding
chr12	7689782	7695776	7689782	7695776	-	ENST00000329913.3@GDF3	ENST00000329913.3	protein_coding	7695461,7689782	7695776,7690704	Gene ID= ENSG00000184344.3 TPM= 1.06 Transcript Type= protein_coding
chr12	7919230	7936275	7919230	7936275	-	ENST00000075120.11@SLC2A3	ENST00000075120.11	protein_coding	7936020,7933810,7932987,7931245,7930480,7929684,7925844,7924410,7922821,7919230	7936275,7933902,7933147,7931485,7930642,7929871,7925948,7924511,7923024,7921631	Gene ID= ENSG00000059804.15 TPM= 4.25 Transcript Type= protein_coding
chr12	8032703	8055503	8032703	8055503	+	ENST00000162391.7@FOXJ2	ENST00000162391.7	protein_coding	8032703,8039819,8042658,8043701,8043951,8044760,8047882,8048697,8049362,8050522,8052762	8033833,8040165,8042732,8043769,8044091,8044958,8048289,8048798,8049571,8050620,8055503	Gene ID= ENSG00000065970.8 TPM= 15.93 Transcript Type= protein_coding
chr12	8058302	8066471	8058302	8066471	-	ENST00000307637.4@C3AR1	ENST00000307637.4	protein_coding	8066278,8058302	8066471,8060195	Gene ID= ENSG00000171860.4 TPM= 2.12 Transcript Type= protein_coding
chr12	8082211	8097777	8082211	8097777	+	ENST00000339754.10@NECAP1	ENST00000339754.10	protein_coding	8082211,8089936,8090195,8091769,8092676,8092872,8095601,8096042	8082383,8090036,8090299,8091850,8092784,8093055,8095703,8097777	Gene ID= ENSG00000089818.17 TPM= 32.93 Transcript Type= protein_coding
chr12	8082268	8097769	8082268	8097769	+	ENST00000450991.6@NECAP1	ENST00000450991.6	protein_coding	8082268,8089936,8090195,8092676,8092872,8095601,8096042	8082383,8090036,8090299,8092784,8093055,8095703,8097769	Gene ID= ENSG00000089818.17 TPM= 1.06 Transcript Type= nonsense_mediated_decay
chr12	8645956	8662812	8645956	8662812	-	ENST00000359478.6@MFAP5	ENST00000359478.6	protein_coding	8662627,8662047,8660863,8655786,8655415,8654437,8651662,8650502,8649501,8645956	8662812,8662106,8660898,8655830,8655447,8654481,8651691,8650589,8649574,8648203	Gene ID= ENSG00000197614.10 TPM= 4.25 Transcript Type= protein_coding
chr12	8940365	8949955	8940365	8949955	-	ENST00000000412.7@M6PR	ENST00000000412.7	protein_coding	8949488,8946229,8945418,8943801,8943405,8942416,8940365	8949955,8946405,8945584,8943910,8943535,8942542,8941940	Gene ID= ENSG00000003056.7 TPM= 144.1 Transcript Type= protein_coding
chr12	8940363	8949665	8940363	8949665	-	transcript730.chr12.nic@M6PR	transcript730.chr12.nic	protein_coding	8949488,8946229,8945418,8943801,8943405,8940363	8949665,8946405,8945584,8943910,8943535,8942542	Gene ID= ENSG00000003056.7 TPM= 7.08 Transcript Type= NA
chr12	8940364	8949761	8940364	8949761	-	ENST00000536844.5@M6PR	ENST00000536844.5	protein_coding	8949488,8946229,8945418,8943801,8940364	8949761,8946405,8945584,8943910,8941940	Gene ID= ENSG00000003056.7 TPM= 3.9 Transcript Type= protein_coding
chr12	9067712	9116157	9067712	9116157	-	ENST00000318602.11@A2M	ENST00000318602.11	protein_coding	9115764,9113360,9112377,9112159,9110314,9109867,9109321,9107524,9106491,9106236,9104239,9101447,9101144,9099381,9098607,9095539,9094973,9093465,9091201,9090356,9089902,9089200,9080094,9079639,9079244,9077701,9077346,9076756,9074560,9072653,9072359,9070488,9069745,9068740,9068183,9067712	9116157,9113543,9112536,9112211,9110334,9110035,9109405,9107644,9106605,9106345,9104400,9101674,9101207,9099523,9098756,9095700,9095084,9093579,9091429,9090482,9090023,9089251,9080177,9079815,9079331,9077857,9077420,9076936,9074783,9072871,9072486,9070578,9069813,9068842,9068224,9067839	Gene ID= ENSG00000175899.14 TPM= 692 Transcript Type= protein_coding
chr12	9113107	9115935	9113107	9115935	-	transcript777.chr12.nnic@NA	transcript777.chr12.nnic	NA	9113107	9115935	Gene ID= novel_gene_chr12_778 TPM= 18.06 Transcript Type= NA
chr12	9240003	9243052	9240003	9243052	+	ENST00000427111.4@LINC00987	ENST00000427111.4	lincRNA	9240003,9241118	9240539,9243052	Gene ID= ENSG00000237248.4 TPM= 3.19 Transcript Type= lincRNA
chr12	9648047	9658412	9648047	9658412	+	ENST00000575094.5@AC010186.2	ENST00000575094.5	transcribed_unprocessed_pseudogene	9648047,9653683,9655873,9656921	9648933,9653808,9655979,9658412	Gene ID= ENSG00000256594.8 TPM= 4.25 Transcript Type= processed_transcript
chr12	9852984	9870136	9852984	9870136	-	ENST00000228438.2@CLEC2B	ENST00000228438.2	protein_coding	9869205,9862499,9857474,9854381,9852984	9870136,9862573,9857637,9854484,9853408	Gene ID= ENSG00000110852.4 TPM= 7.44 Transcript Type= protein_coding
chr12	10158301	10172138	10158301	10172138	-	ENST00000309539.7@OLR1	ENST00000309539.7	protein_coding	10172002,10169074,10166712,10160786,10160347,10158301	10172138,10169175,10166957,10160925,10160462,10160021	Gene ID= ENSG00000173391.8 TPM= 2.12 Transcript Type= protein_coding
chr12	10212805	10223130	10212805	10223130	+	ENST00000266458.9@GABARAPL1	ENST00000266458.9	protein_coding	10212805,10218063,10220440,10221787	10213219,10218141,10220558,10223130	Gene ID= ENSG00000139112.10 TPM= 207.65 Transcript Type= protein_coding
chr12	10213106	10223128	10213106	10223128	+	ENST00000541960.5@GABARAPL1	ENST00000541960.5	protein_coding	10213106,10218063,10220440,10221787	10214779,10218141,10220558,10223128	Gene ID= ENSG00000139112.10 TPM= 3.19 Transcript Type= nonsense_mediated_decay
chr12	10604190	10613623	10604190	10613623	-	ENST00000320756.6@MAGOHB	ENST00000320756.6	protein_coding	10613439,10610622,10609831,10607854,10604190	10613623,10610680,10609941,10607936,10606374	Gene ID= ENSG00000111196.9 TPM= 10.62 Transcript Type= protein_coding
chr12	10699089	10723307	10699089	10723307	-	ENST00000279550.11@YBX3	ENST00000279550.11	protein_coding	10722850,10719080,10718088,10715694,10713211,10704051,10701960,10701254,10699089	10723307,10719143,10718121,10715783,10713333,10704148,10702134,10701353,10699654	Gene ID= ENSG00000060138.12 TPM= 1527.58 Transcript Type= protein_coding
chr12	10699213	10723312	10699213	10723312	-	ENST00000228251.8@YBX3	ENST00000228251.8	protein_coding	10722850,10719080,10718088,10715694,10713211,10709908,10704051,10701960,10701254,10699213	10723312,10719143,10718121,10715783,10713333,10710114,10704148,10702134,10701353,10699654	Gene ID= ENSG00000060138.12 TPM= 245.55 Transcript Type= protein_coding
chr12	10845849	11171613	10845849	11171613	-	ENST00000535024.5@PRR4	ENST00000535024.5	protein_coding	11171422,11047020,10973655,10848372,10847045,10845849	11171613,11047188,10973721,10848407,10847367,10845950	Gene ID= ENSG00000111215.11 TPM= 1.06 Transcript Type= protein_coding
chr12	11171222	11176016	11171222	11176016	+	ENST00000622602.1@SMIM10L1	ENST00000622602.1	protein_coding	11171222	11176016	Gene ID= ENSG00000256537.4 TPM= 6.37 Transcript Type= protein_coding
chr12	11788758	11791230	11788758	11791230	-	transcript915.chr12.nnic@NA	transcript915.chr12.nnic	NA	11788758	11791230	Gene ID= novel_gene_chr12_916 TPM= 5.31 Transcript Type= NA
chr12	12326056	12350541	12326056	12350541	-	ENST00000535902.5@MANSC1	ENST00000535902.5	protein_coding	12350078,12343092,12338420,12326056	12350541,12343414,12338560,12330958	Gene ID= ENSG00000111261.13 TPM= 6.37 Transcript Type= protein_coding
chr12	12355406	12357067	12355406	12357067	-	ENST00000381800.3@LOH12CR2	ENST00000381800.3	lincRNA	12356928,12355406	12357067,12356805	Gene ID= ENSG00000205791.3 TPM= 2.12 Transcript Type= lincRNA
chr12	12357078	12461902	12357078	12461902	+	transcript924.chr12.nnic@BORCS5	transcript924.chr12.nnic	protein_coding	12357078,12361206,12435628,12461357	12357118,12361349,12435785,12461902	Gene ID= ENSG00000165714.10 TPM= 2.12 Transcript Type= NA
chr12	12470678	12475576	12470678	12475576	-	transcript929.chr12.nnic@NA	transcript929.chr12.nnic	NA	12470678	12475576	Gene ID= novel_gene_chr12_930 TPM= 2.12 Transcript Type= NA
chr12	12491165	12493325	12491165	12493325	-	transcript932.chr12.nnic@NA	transcript932.chr12.nnic	NA	12491165	12493325	Gene ID= novel_gene_chr12_933 TPM= 2.12 Transcript Type= NA
chr12	12611892	12645108	12611892	12645108	+	ENST00000228865.2@CREBL2	ENST00000228865.2	protein_coding	12611892,12635777,12637570,12641994	12612187,12635974,12637714,12645108	Gene ID= ENSG00000111269.2 TPM= 9.56 Transcript Type= protein_coding
chr12	12785607	12791466	12785607	12791466	+	ENST00000356591.4@APOLD1	ENST00000356591.4	protein_coding	12785607,12786909	12785694,12791466	Gene ID= ENSG00000178878.12 TPM= 27.62 Transcript Type= protein_coding
chr12	12725929	12829975	12725929	12829975	+	ENST00000534843.1@APOLD1	ENST00000534843.1	protein_coding	12725929,12726297,12812261,12813207,12814131,12821208,12821655,12821965,12822661,12823203,12823870,12824540,12826000,12827246,12829423	12726096,12726373,12812440,12813454,12814224,12821396,12821726,12822083,12822732,12823319,12824016,12824677,12826070,12827375,12829975	Gene ID= ENSG00000178878.12 TPM= 33.28 Transcript Type= nonsense_mediated_decay
chr12	12813346	12829981	12813346	12829981	+	ENST00000358007.7@DDX47	ENST00000358007.7	protein_coding	12813346,12814131,12821208,12821655,12821965,12822661,12823203,12823870,12824540,12826000,12827246,12829423	12813454,12814224,12821396,12821726,12822083,12822732,12823319,12824016,12824677,12826070,12827375,12829981	Gene ID= ENSG00000213782.7 TPM= 16.28 Transcript Type= protein_coding
chr12	12813354	12829979	12813354	12829979	+	ENST00000545038.5@DDX47	ENST00000545038.5	protein_coding	12813354,12814131,12821208,12821655,12821965,12822661,12823203,12824540,12826000,12827246,12829423	12813454,12814224,12821396,12821726,12822083,12822732,12824016,12824677,12826070,12827375,12829979	Gene ID= ENSG00000213782.7 TPM= 1.41 Transcript Type= retained_intron
chr12	12974864	13000273	12974864	13000273	-	ENST00000014930.8@HEBP1	ENST00000014930.8	protein_coding	13000037,12989277,12987152,12974864	13000273,12989415,12987332,12975479	Gene ID= ENSG00000013583.8 TPM= 69.04 Transcript Type= protein_coding
chr12	13000420	13004830	13000420	13004830	+	ENST00000624664.1@HTR7P1	ENST00000624664.1	transcribed_processed_pseudogene	13000420	13004830	Gene ID= ENSG00000183935.5 TPM= 1.06 Transcript Type= TEC
chr12	13196716	13219939	13196716	13219939	+	ENST00000256951.9@EMP1	ENST00000256951.9	protein_coding	13196716,13211469,13213479,13213681,13214534	13196872,13211588,13213575,13213821,13219939	Gene ID= ENSG00000134531.9 TPM= 8.5 Transcript Type= protein_coding
chr12	14365632	14502935	14365632	14502935	+	ENST00000261168.8@ATF7IP	ENST00000261168.8	protein_coding	14365632,14423909,14434337,14436106,14438130,14446988,14456561,14457207,14460495,14466526,14475890,14478317,14481003,14496231,14497654	14365827,14425473,14434423,14436251,14438267,14447053,14456634,14457295,14461133,14466590,14475968,14478472,14481185,14496343,14502935	Gene ID= ENSG00000171681.12 TPM= 8.5 Transcript Type= protein_coding
chr12	14503660	14507517	14503660	14507517	-	transcript984.chr12.nnic@NA	transcript984.chr12.nnic	NA	14503660	14507517	Gene ID= novel_gene_chr12_985 TPM= 2.12 Transcript Type= NA
chr12	14503661	14568349	14503661	14568349	-	ENST00000240617.9@PLBD1	ENST00000240617.9	protein_coding	14567582,14553193,14542208,14540764,14536570,14535659,14511511,14511260,14506933,14506162,14503661	14568349,14553412,14542291,14540902,14536710,14535803,14511711,14511400,14507118,14506268,14503954	Gene ID= ENSG00000121316.10 TPM= 68.51 Transcript Type= protein_coding
chr12	14503661	14567913	14503661	14567913	-	transcript968.chr12.nic@PLBD1	transcript968.chr12.nic	protein_coding	14567582,14542208,14540764,14536570,14535659,14511511,14511260,14506933,14506162,14503661	14567913,14542291,14540902,14536710,14535803,14511711,14511400,14507118,14506268,14503954	Gene ID= ENSG00000121316.10 TPM= 3.19 Transcript Type= NA
chr12	14535207	14567865	14535207	14567865	-	transcript974.chr12.nic@PLBD1	transcript974.chr12.nic	protein_coding	14567582,14553193,14542208,14540764,14536570,14535207	14567865,14553412,14542291,14540902,14536710,14535803	Gene ID= ENSG00000121316.10 TPM= 2.66 Transcript Type= NA
chr12	14774383	14775026	14774383	14775026	+	ENST00000544848.2@H2AFJ	ENST00000544848.2	protein_coding	14774383	14775026	Gene ID= ENSG00000246705.4 TPM= 22.31 Transcript Type= protein_coding
chr12	14784579	14803540	14784579	14803540	-	ENST00000261167.6@WBP11	ENST00000261167.6	protein_coding	14803352,14801320,14800752,14799635,14796807,14794971,14794537,14793731,14791169,14790456,14788951,14784579	14803540,14801428,14800783,14799728,14797003,14795104,14794736,14793922,14791270,14790749,14789133,14787498	Gene ID= ENSG00000084463.7 TPM= 7.44 Transcript Type= protein_coding
chr12	14803572	14824415	14803572	14824415	+	ENST00000330828.2@C12orf60	ENST00000330828.2	protein_coding	14803572,14822912	14803751,14824415	Gene ID= ENSG00000182993.3 TPM= 2.12 Transcript Type= protein_coding
chr12	14825569	14843495	14825569	14843495	-	ENST00000228936.4@ART4	ENST00000228936.4	protein_coding	14842970,14840445,14825569	14843495,14841153,14829462	Gene ID= ENSG00000111339.10 TPM= 2.12 Transcript Type= protein_coding
chr12	14881181	14885926	14881181	14885926	-	ENST00000539261.5@MGP	ENST00000539261.5	protein_coding	14885731,14884213,14882972,14881181	14885926,14884245,14883047,14882280	Gene ID= ENSG00000111341.9 TPM= 108.34 Transcript Type= protein_coding
chr12	15107783	15221417	15107783	15221417	-	ENST00000256953.6@RERG	ENST00000256953.6	protein_coding	15221195,15217429,15121063,15111344,15107783	15221417,15217603,15121119,15111417,15109517	Gene ID= ENSG00000134533.6 TPM= 5.31 Transcript Type= protein_coding
chr12	15620162	15789576	15620162	15789576	-	ENST00000281172.9@EPS8	ENST00000281172.9	protein_coding	15789161,15682893,15681226,15670856,15669664,15669387,15666440,15665756,15662026,15660614,15658497,15658079,15654145,15650823,15647127,15641722,15640703,15631442,15624227,15623158,15620162	15789576,15682972,15681302,15670923,15669825,15669536,15666522,15665892,15662099,15660740,15658585,15658153,15654293,15651006,15647260,15641830,15640846,15631664,15624407,15623287,15621430	Gene ID= ENSG00000151491.12 TPM= 14.87 Transcript Type= protein_coding
chr12	15882391	15903442	15882391	15903442	+	ENST00000541731.1@STRAP	ENST00000541731.1	protein_coding	15882391,15889928,15890597,15894047,15895359,15897882,15899904,15900947,15902917	15882819,15890009,15890669,15894143,15895496,15898018,15900053,15901012,15903442	Gene ID= ENSG00000023734.10 TPM= 27.62 Transcript Type= nonsense_mediated_decay
chr12	15882395	15903478	15882395	15903478	+	ENST00000419869.6@STRAP	ENST00000419869.6	protein_coding	15882395,15883541,15889928,15890597,15894047,15895359,15897882,15899904,15900947,15902917	15882819,15883676,15890009,15890669,15894143,15895496,15898018,15900053,15901012,15903478	Gene ID= ENSG00000023734.10 TPM= 262.35 Transcript Type= protein_coding
chr12	15911172	16037282	15911172	16037282	+	ENST00000428559.6@DERA	ENST00000428559.6	protein_coding	15911172,15956936,15958188,15959829,15962813,15982308,16032542,16036232,16036690	15911414,15957033,15958335,15959924,15962947,15982436,16032654,16036381,16037282	Gene ID= ENSG00000023697.12 TPM= 31.86 Transcript Type= protein_coding
chr12	16347649	16364403	16347649	16364403	+	ENST00000396210.7@MGST1	ENST00000396210.7	protein_coding	16347649,16354231,16357605,16363795	16347710,16354378,16357699,16364403	Gene ID= ENSG00000008394.12 TPM= 3.19 Transcript Type= protein_coding
chr12	18761272	18764548	18761272	18764548	+	transcript1020.chr12.nnic@NA	transcript1020.chr12.nnic	NA	18761272	18764548	Gene ID= novel_gene_chr12_1021 TPM= 2.12 Transcript Type= NA
chr12	19129548	19376397	19129548	19376397	+	transcript1026.chr12.nnic@PLEKHA5	transcript1026.chr12.nnic	protein_coding	19129548,19130051,19132393,19253940,19255045,19257433,19260949,19265750,19269770,19274516,19283280,19287473,19320562,19322310,19322518,19336515,19343323,19345842,19348399,19353884,19358228,19359412,19361582,19365964,19369693,19375531	19129888,19130130,19132450,19254023,19255165,19257537,19261021,19265850,19269885,19274983,19283745,19287556,19320624,19322390,19322667,19336616,19343419,19345888,19348519,19354002,19358437,19359546,19361706,19366109,19369798,19376397	Gene ID= ENSG00000052126.14 TPM= 3.01 Transcript Type= NA
chr12	19236900	19376397	19236900	19376397	+	transcript1031.chr12.nic@PLEKHA5	transcript1031.chr12.nic	protein_coding	19236900,19253940,19255045,19257433,19260949,19265750,19269770,19274516,19283280,19287473,19320562,19322310,19322518,19336515,19343323,19345842,19348399,19353884,19358228,19359412,19361582,19365964,19369693,19375531	19237034,19254023,19255165,19257537,19261021,19265850,19269885,19274983,19283745,19287556,19320624,19322390,19322667,19336616,19343434,19345888,19348519,19354002,19358437,19359546,19361706,19366109,19369798,19376397	Gene ID= ENSG00000052126.14 TPM= 2.47 Transcript Type= NA
chr12	19129640	19358305	19129640	19358305	+	transcript1032.chr12.nic@PLEKHA5	transcript1032.chr12.nic	protein_coding	19129640,19130051,19132393,19253940,19255045,19257433,19260949,19265750,19269770,19274516,19283280,19287473,19320562,19322310,19322518,19336515,19343323,19345842,19348399,19353884,19358228	19129888,19130130,19132450,19254023,19255165,19257537,19261021,19265850,19269885,19274983,19283745,19287556,19320624,19322390,19322667,19336616,19343434,19345888,19348519,19354002,19358305	Gene ID= ENSG00000052126.14 TPM= 3.72 Transcript Type= NA
chr12	19129752	19202003	19129752	19202003	+	ENST00000540972.5@PLEKHA5	ENST00000540972.5	protein_coding	19129752,19130051,19132393,19200325	19129888,19130130,19132450,19202003	Gene ID= ENSG00000052126.14 TPM= 2.12 Transcript Type= protein_coding
chr12	19129794	19376400	19129794	19376400	+	ENST00000299275.10@PLEKHA5	ENST00000299275.10	protein_coding	19129794,19130051,19132393,19253940,19255045,19257433,19260949,19265750,19269770,19274516,19283280,19287473,19320562,19322310,19322518,19336515,19343323,19345842,19348399,19353884,19358228,19359412,19361582,19365964,19369693,19375531	19129888,19130130,19132450,19254023,19255165,19257537,19261021,19265850,19269885,19274983,19283745,19287556,19320624,19322390,19322667,19336616,19343434,19345888,19348519,19354002,19358437,19359546,19361706,19366109,19369798,19376400	Gene ID= ENSG00000052126.14 TPM= 25.84 Transcript Type= protein_coding
chr12	19131675	19133326	19131675	19133326	-	transcript1046.chr12.nnic@NA	transcript1046.chr12.nnic	NA	19131675	19133326	Gene ID= novel_gene_chr12_1047 TPM= 2.12 Transcript Type= NA
chr12	19132775	19137754	19132775	19137754	-	transcript1048.chr12.nnic@NA	transcript1048.chr12.nnic	NA	19132775	19137754	Gene ID= novel_gene_chr12_1049 TPM= 8.5 Transcript Type= NA
chr12	19218908	19222090	19218908	19222090	-	transcript1050.chr12.nnic@NA	transcript1050.chr12.nnic	NA	19218908	19222090	Gene ID= novel_gene_chr12_1051 TPM= 4.25 Transcript Type= NA
chr12	19439699	19520224	19439699	19520224	+	ENST00000266508.13@AEBP2	ENST00000266508.13	protein_coding	19439699,19462510,19473248,19493800,19500097,19512398,19514671,19518087	19440370,19462717,19473355,19493986,19500221,19512465,19514784,19520224	Gene ID= ENSG00000139154.14 TPM= 7.44 Transcript Type= protein_coding
chr12	19570969	19575845	19570969	19575845	+	transcript1059.chr12.nnic@NA	transcript1059.chr12.nnic	NA	19570969	19575845	Gene ID= novel_gene_chr12_1060 TPM= 2.12 Transcript Type= NA
chr12	20104587	20109879	20104587	20109879	-	transcript1061.chr12.nnic@NA	transcript1061.chr12.nnic	NA	20109774,20105673,20104587	20109879,20105841,20104787	Gene ID= novel_gene_chr12_1062 TPM= 2.12 Transcript Type= NA
chr12	20368606	20617643	20368606	20617643	+	transcript1076.chr12.nic@PDE3A	transcript1076.chr12.nic	protein_coding	20368606,20556660,20613443,20616230	20370244,20556710,20613700,20617643	Gene ID= ENSG00000172572.6 TPM= 5.31 Transcript Type= NA
chr12	20385791	20389950	20385791	20389950	+	transcript1087.chr12.nnic@NA	transcript1087.chr12.nnic	NA	20385791	20389950	Gene ID= novel_gene_chr12_1088 TPM= 3.19 Transcript Type= NA
chr12	20448754	20452816	20448754	20452816	-	transcript1091.chr12.nnic@NA	transcript1091.chr12.nnic	NA	20448754	20452816	Gene ID= novel_gene_chr12_1092 TPM= 26.55 Transcript Type= NA
chr12	20453175	20454605	20453175	20454605	-	transcript1093.chr12.nnic@NA	transcript1093.chr12.nnic	NA	20453175	20454605	Gene ID= novel_gene_chr12_1094 TPM= 7.44 Transcript Type= NA
chr12	20545983	20549412	20545983	20549412	+	transcript1081.chr12.nnic@NA	transcript1081.chr12.nnic	NA	20545983	20549412	Gene ID= novel_gene_chr12_1082 TPM= 3.19 Transcript Type= NA
chr12	20581618	20583138	20581618	20583138	-	transcript1095.chr12.nnic@NA	transcript1095.chr12.nnic	NA	20581618	20583138	Gene ID= novel_gene_chr12_1096 TPM= 2.12 Transcript Type= NA
chr12	20680729	20683509	20680729	20683509	+	transcript1083.chr12.nnic@NA	transcript1083.chr12.nnic	NA	20680729	20683509	Gene ID= novel_gene_chr12_1084 TPM= 6.37 Transcript Type= NA
chr12	20685140	20687636	20685140	20687636	+	transcript1089.chr12.nnic@NA	transcript1089.chr12.nnic	NA	20685140	20687636	Gene ID= novel_gene_chr12_1090 TPM= 3.19 Transcript Type= NA
chr12	21468911	21501642	21468911	21501642	-	transcript1100.chr12.nic@RECQL	transcript1100.chr12.nic	protein_coding	21501463,21501170,21499555,21491519,21490199,21486479,21483376,21477803,21476911,21475676,21475468,21474841,21473551,21471428,21470969,21468911	21501642,21501215,21499615,21491716,21490378,21486585,21483574,21477969,21476992,21475824,21475585,21474979,21473642,21471647,21471098,21470346	Gene ID= ENSG00000004700.15 TPM= 4.25 Transcript Type= NA
chr12	21468911	21501596	21468911	21501596	-	transcript1102.chr12.nic@RECQL	transcript1102.chr12.nic	protein_coding	21501463,21501170,21499555,21491519,21490199,21486479,21483376,21477803,21476911,21475676,21475468,21474841,21473551,21471428,21470969,21468911	21501596,21501372,21499615,21491716,21490378,21486585,21483574,21477969,21476992,21475824,21475585,21474979,21473642,21471647,21471098,21470346	Gene ID= ENSG00000004700.15 TPM= 2.12 Transcript Type= NA
chr12	21468911	21501629	21468911	21501629	-	transcript1111.chr12.nic@RECQL	transcript1111.chr12.nic	protein_coding	21501463,21499555,21491519,21490199,21486479,21483376,21477803,21476911,21475676,21475468,21474841,21473551,21471428,21470969,21468911	21501629,21499615,21491716,21490378,21486585,21483574,21477969,21476992,21475824,21475585,21474979,21473642,21471647,21471098,21470346	Gene ID= ENSG00000004700.15 TPM= 2.12 Transcript Type= NA
chr12	21468911	21501593	21468911	21501593	-	ENST00000444129.6@RECQL	ENST00000444129.6	protein_coding	21501170,21499555,21491519,21490199,21486479,21483376,21477803,21476911,21475676,21475468,21474841,21473551,21471428,21470969,21468911	21501593,21499615,21491716,21490378,21486585,21483574,21477969,21476992,21475824,21475585,21474979,21473642,21471647,21471098,21470346	Gene ID= ENSG00000004700.15 TPM= 14.87 Transcript Type= protein_coding
chr12	21480173	21482277	21480173	21482277	+	transcript1120.chr12.nnic@NA	transcript1120.chr12.nnic	NA	21480173	21482277	Gene ID= novel_gene_chr12_1121 TPM= 3.19 Transcript Type= NA
chr12	21501815	21518408	21501815	21518408	+	ENST00000229314.9@GOLT1B	ENST00000229314.9	protein_coding	21501815,21506885,21508383,21512295,21515669	21501948,21506976,21508561,21512376,21518408	Gene ID= ENSG00000111711.9 TPM= 7.44 Transcript Type= protein_coding
chr12	21527435	21532523	21527435	21532523	+	ENST00000535139.5@SPX	ENST00000535139.5	protein_coding	21527435,21529001,21531137	21527789,21529084,21532523	Gene ID= ENSG00000134548.9 TPM= 14.87 Transcript Type= retained_intron
chr12	21527936	21532523	21527936	21532523	+	ENST00000543800.5@SPX	ENST00000543800.5	protein_coding	21527936,21529001,21531137	21528151,21529084,21532523	Gene ID= ENSG00000134548.9 TPM= 5.31 Transcript Type= processed_transcript
chr12	21635342	21657842	21635342	21657842	-	ENST00000350669.5@LDHB	ENST00000350669.5	protein_coding	21657751,21654543,21646899,21643935,21641952,21638353,21637071,21635342	21657842,21654677,21647016,21644108,21642125,21638470,21637194,21635709	Gene ID= ENSG00000111716.12 TPM= 1744.95 Transcript Type= protein_coding
chr12	21635342	21657794	21635342	21657794	-	ENST00000396076.5@LDHB	ENST00000396076.5	protein_coding	21657468,21654543,21646899,21643935,21641952,21638353,21637071,21635342	21657794,21654677,21647016,21644108,21642125,21638470,21637194,21635709	Gene ID= ENSG00000111716.12 TPM= 48.68 Transcript Type= protein_coding
chr12	21764955	21774821	21764955	21774821	-	ENST00000240662.2@KCNJ8	ENST00000240662.2	protein_coding	21774546,21773243,21764955	21774821,21773686,21766623	Gene ID= ENSG00000121361.3 TPM= 20.18 Transcript Type= protein_coding
chr12	21800604	21941426	21800604	21941426	-	transcript1151.chr12.nic@ABCC9	transcript1151.chr12.nic	protein_coding	21941200,21940710,21936533,21933782,21925942,21916937,21915668,21912872,21910826,21910157,21908077,21906126,21895275,21894032,21887826,21882766,21875654,21872625,21864439,21862953,21860971,21859586,21852368,21852097,21848150,21845603,21844767,21844483,21842314,21838078,21828958,21818150,21817187,21815763,21814644,21812049,21809852,21807346,21805998,21800604	21941426,21940825,21936694,21933923,21926063,21917103,21915910,21913066,21910978,21910312,21908211,21906288,21895315,21894174,21887934,21882873,21875726,21872730,21864477,21863054,21861055,21859666,21852505,21852222,21848246,21845832,21844915,21844552,21842471,21838170,21829060,21818251,21817307,21815893,21814722,21812157,21809955,21807479,21806060,21801181	Gene ID= ENSG00000069431.11 TPM= 3.19 Transcript Type= NA
chr12	21922969	21941309	21922969	21941309	-	transcript1157.chr12.nic@ABCC9	transcript1157.chr12.nic	protein_coding	21941200,21940710,21936533,21933782,21925942,21922969	21941309,21940825,21936694,21933923,21926063,21923856	Gene ID= ENSG00000069431.11 TPM= 4.25 Transcript Type= NA
chr12	21915516	21916640	21915516	21916640	-	transcript1161.chr12.nnic@NA	transcript1161.chr12.nnic	NA	21915516	21916640	Gene ID= novel_gene_chr12_1162 TPM= 2.12 Transcript Type= NA
chr12	22046174	22065663	22046174	22065663	+	ENST00000229329.6@CMAS	ENST00000229329.6	protein_coding	22046174,22055149,22055455,22058567,22060832,22061281,22062281,22065121	22046563,22055291,22055610,22058700,22060926,22061452,22062434,22065663	Gene ID= ENSG00000111726.12 TPM= 115.78 Transcript Type= protein_coding
chr12	22046225	22065674	22046225	22065674	+	ENST00000534981.5@CMAS	ENST00000534981.5	protein_coding	22046225,22055149,22055455,22058567,22060832,22062281,22065121	22046563,22055291,22055610,22058700,22060926,22062434,22065674	Gene ID= ENSG00000111726.12 TPM= 5.31 Transcript Type= nonsense_mediated_decay
chr12	22448583	22544546	22448583	22544546	-	ENST00000333957.8@C2CD5	ENST00000333957.8	protein_coding	22544320,22544061,22535258,22527721,22525610,22524472,22523426,22517986,22513294,22506711,22493223,22490123,22484697,22482557,22478313,22474751,22472744,22472286,22471967,22471399,22470824,22469709,22456971,22453896,22448583	22544546,22544179,22535344,22527892,22525705,22524627,22523624,22518137,22513379,22506819,22493337,22490218,22484888,22482743,22478477,22474891,22472807,22472347,22472065,22471488,22470911,22469795,22457161,22454042,22449891	Gene ID= ENSG00000111731.12 TPM= 2.12 Transcript Type= protein_coding
chr12	22625075	22690665	22625075	22690665	+	ENST00000266517.8@ETNK1	ENST00000266517.8	protein_coding	22625075,22643763,22659014,22661063,22671272,22673500,22684483,22684882	22625586,22644022,22659154,22661205,22671355,22673660,22684556,22690665	Gene ID= ENSG00000139163.15 TPM= 1.06 Transcript Type= protein_coding
chr12	25195265	25205015	25195265	25205015	+	ENST00000556885.5@ETFRF1	ENST00000556885.5	protein_coding	25195265,25203920,25204091	25195337,25204007,25205015	Gene ID= ENSG00000205707.10 TPM= 28.68 Transcript Type= protein_coding
chr12	25204789	25250931	25204789	25250931	-	ENST00000311936.7@KRAS	ENST00000311936.7	protein_coding	25250751,25245274,25227234,25225614,25204789	25250931,25245395,25227412,25225773,25209911	Gene ID= ENSG00000133703.11 TPM= 6.37 Transcript Type= protein_coding
chr12	25247928	25249606	25247928	25249606	+	transcript1180.chr12.nnic@NA	transcript1180.chr12.nnic	NA	25247928	25249606	Gene ID= novel_gene_chr12_1181 TPM= 6.37 Transcript Type= NA
chr12	25385737	25386195	25385737	25386195	-	transcript1182.chr12.nnic@NA	transcript1182.chr12.nnic	NA	25385737	25386195	Gene ID= novel_gene_chr12_1183 TPM= 2.12 Transcript Type= NA
chr12	25958645	26072869	25958645	26072869	+	transcript1184.chr12.nic@RASSF8	transcript1184.chr12.nic	protein_coding	25958645,25995037,26055279,26064498,26067569,26068697	25959148,25995130,26055446,26065387,26067713,26072869	Gene ID= ENSG00000123094.15 TPM= 13.28 Transcript Type= NA
chr12	25958639	26072869	25958639	26072869	+	transcript1187.chr12.nic@RASSF8	transcript1187.chr12.nic	protein_coding	25958639,26055279,26064498,26067569,26068697	25959148,26055446,26065387,26067713,26072869	Gene ID= ENSG00000123094.15 TPM= 10.09 Transcript Type= NA
chr12	26195340	26234779	26195340	26234779	+	ENST00000422622.3@SSPN	ENST00000422622.3	protein_coding	26195340,26224293,26230711	26195531,26224379,26234779	Gene ID= ENSG00000123096.11 TPM= 4.25 Transcript Type= protein_coding
chr12	26195496	26232955	26195496	26232955	+	ENST00000242729.6@SSPN	ENST00000242729.6	protein_coding	26195496,26224293,26230711	26195951,26224379,26232955	Gene ID= ENSG00000123096.11 TPM= 13.81 Transcript Type= protein_coding
chr12	26787923	26833227	26787923	26833227	-	transcript1213.chr12.nic@ITPR2	transcript1213.chr12.nic	protein_coding	26832690,26787923	26833227,26790227	Gene ID= ENSG00000123104.11 TPM= 2.12 Transcript Type= NA
chr12	26586330	26589795	26586330	26589795	+	transcript1214.chr12.nnic@NA	transcript1214.chr12.nnic	NA	26586330	26589795	Gene ID= novel_gene_chr12_1215 TPM= 3.19 Transcript Type= NA
chr12	26905181	26938321	26905181	26938321	-	ENST00000261191.11@INTS13	ENST00000261191.11	protein_coding	26937796,26936579,26934556,26928703,26928205,26925761,26924355,26922616,26917644,26917352,26916002,26914408,26913974,26913457,26911178,26906302,26905181	26938321,26936814,26934630,26928905,26928285,26925851,26924483,26922700,26917733,26917441,26916180,26914578,26914128,26913687,26911317,26906437,26905536	Gene ID= ENSG00000064102.14 TPM= 13.81 Transcript Type= protein_coding
chr12	26938383	26966553	26938383	26966553	+	ENST00000229395.7@FGFR1OP2	ENST00000229395.7	protein_coding	26938383,26954145,26956543,26957601,26960515,26963342,26964596	26938710,26954293,26956660,26957743,26960628,26963455,26966553	Gene ID= ENSG00000111790.13 TPM= 6.37 Transcript Type= protein_coding
chr12	26938500	26966650	26938500	26966650	+	ENST00000327214.5@FGFR1OP2	ENST00000327214.5	protein_coding	26938500,26954145,26956543,26957601,26963342,26964596	26938710,26954293,26956660,26957743,26963455,26966650	Gene ID= ENSG00000111790.13 TPM= 8.5 Transcript Type= protein_coding
chr12	26952677	26956932	26952677	26956932	-	transcript1238.chr12.nnic@NA	transcript1238.chr12.nnic	NA	26952677	26956932	Gene ID= novel_gene_chr12_1239 TPM= 2.12 Transcript Type= NA
chr12	26973195	27014380	26973195	27014380	-	transcript1249.chr12.nnic@TM7SF3	transcript1249.chr12.nnic	protein_coding	27014078,26999526,26996742,26995237,26982773,26980566,26979784,26976260,26975496,26973195	27014380,26999676,26996862,26995408,26982859,26980646,26979936,26976357,26975658,26974227	Gene ID= ENSG00000064115.10 TPM= 2.12 Transcript Type= NA
chr12	26973195	27014394	26973195	27014394	-	ENST00000343028.8@TM7SF3	ENST00000343028.8	protein_coding	27014078,27003236,26999526,26996742,26995237,26990450,26982773,26980566,26979784,26976260,26975496,26973195	27014394,27003390,26999676,26996862,26995408,26990627,26982859,26980646,26979936,26976357,26975658,26974227	Gene ID= ENSG00000064115.10 TPM= 4.25 Transcript Type= protein_coding
chr12	27022550	27029749	27022550	27029749	+	ENST00000282892.3@MED21	ENST00000282892.3	protein_coding	27022550,27026420,27027347,27028285	27022621,27026534,27027447,27029749	Gene ID= ENSG00000152944.8 TPM= 61.61 Transcript Type= protein_coding
chr12	27034540	27038952	27034540	27038952	+	transcript1262.chr12.nnic@NA	transcript1262.chr12.nnic	NA	27034540	27038952	Gene ID= novel_gene_chr12_1263 TPM= 3.19 Transcript Type= NA
chr12	27037100	27038960	27037100	27038960	+	ENST00000620519.1@AC092747.4	ENST00000620519.1	lincRNA	27037100	27038960	Gene ID= ENSG00000275764.1 TPM= 1.06 Transcript Type= lincRNA
chr12	27244243	27325090	27244243	27325090	+	transcript1291.chr12.nic@STK38L	transcript1291.chr12.nic	protein_coding	27244243,27297710,27302137,27309114,27312549,27314504,27315015,27315289,27317336,27317896,27319328,27322143,27322328	27244332,27297854,27302188,27309197,27312672,27314658,27315117,27315350,27317453,27318019,27319423,27322234,27325090	Gene ID= ENSG00000211455.7 TPM= 14.55 Transcript Type= NA
chr12	27247816	27249676	27247816	27249676	-	transcript1304.chr12.nnic@NA	transcript1304.chr12.nnic	NA	27247816	27249676	Gene ID= novel_gene_chr12_1305 TPM= 8.5 Transcript Type= NA
chr12	27298222	27299825	27298222	27299825	+	transcript1302.chr12.nnic@NA	transcript1302.chr12.nnic	NA	27298222	27299825	Gene ID= novel_gene_chr12_1303 TPM= 2.12 Transcript Type= NA
chr12	27524202	27695564	27524202	27695564	+	transcript1315.chr12.nic@PPFIBP1	transcript1315.chr12.nic	protein_coding	27524202,27578152,27633362,27634910,27646062,27647729,27650010,27654722,27655143,27656616,27658816,27660884,27664362,27667166,27671431,27672427,27673767,27674192,27676428,27677064,27679489,27679933,27681546,27682387,27682615,27687385,27688298,27689015,27691749,27692591,27692796	27524365,27578239,27633460,27635115,27646148,27647842,27650141,27654814,27655235,27656730,27658848,27660945,27664437,27667320,27671546,27672483,27673827,27674221,27676599,27677096,27679639,27680061,27681696,27682498,27682703,27687507,27688423,27689203,27691928,27692656,27695564	Gene ID= ENSG00000110841.13 TPM= 17.29 Transcript Type= NA
chr12	27524205	27695564	27524205	27695564	+	transcript1321.chr12.nic@PPFIBP1	transcript1321.chr12.nic	protein_coding	27524205,27578152,27633362,27634910,27646062,27647729,27650010,27654722,27655143,27656616,27660884,27664362,27667166,27671431,27672427,27673767,27674192,27676428,27677064,27679489,27679933,27681546,27682387,27682615,27687385,27688298,27689015,27691749,27692591,27692796	27524365,27578239,27633460,27635115,27646148,27647842,27650141,27654814,27655235,27656730,27660945,27664437,27667320,27671546,27672483,27673827,27674221,27676599,27677096,27679639,27680061,27681696,27682498,27682703,27687507,27688423,27689203,27691928,27692656,27695564	Gene ID= ENSG00000110841.13 TPM= 16.23 Transcript Type= NA
chr12	27524205	27656730	27524205	27656730	+	transcript1340.chr12.nic@PPFIBP1	transcript1340.chr12.nic	protein_coding	27524205,27578152,27646062,27647729,27650010,27654722,27655143,27656616	27524365,27578239,27646148,27647842,27650141,27654814,27655235,27656730	Gene ID= ENSG00000110841.13 TPM= 2.12 Transcript Type= NA
chr12	27524206	27695564	27524206	27695564	+	ENST00000318304.12@PPFIBP1	ENST00000318304.12	protein_coding	27524206,27578152,27633362,27634910,27646062,27647729,27650010,27654722,27655143,27656616,27660884,27664362,27667166,27671431,27672427,27673767,27674192,27676428,27679489,27679933,27681546,27682387,27682615,27687385,27688298,27689015,27691749,27692591,27692796	27524365,27578239,27633460,27635115,27646148,27647842,27650141,27654814,27655235,27656730,27660945,27664437,27667320,27671546,27672483,27673827,27674221,27676599,27679639,27680061,27681696,27682498,27682703,27687507,27688423,27689203,27691928,27692656,27695564	Gene ID= ENSG00000110841.13 TPM= 15.96 Transcript Type= protein_coding
chr12	27524220	27647977	27524220	27647977	+	ENST00000535047.5@PPFIBP1	ENST00000535047.5	protein_coding	27524220,27578152,27633362,27634910,27646062,27647729	27524365,27578239,27633460,27635115,27646148,27647977	Gene ID= ENSG00000110841.13 TPM= 2.24 Transcript Type= protein_coding
chr12	27524182	27695563	27524182	27695563	+	ENST00000537927.5@PPFIBP1	ENST00000537927.5	protein_coding	27524182,27578152,27646062,27647729,27650010,27654722,27655143,27656616,27660884,27664362,27667166,27671431,27672427,27673767,27674192,27676428,27679489,27679933,27681546,27682387,27682615,27687385,27688298,27689015,27691749,27692591,27692796	27524365,27578239,27646148,27647842,27650141,27654814,27655235,27656730,27660945,27664437,27667320,27671546,27672483,27673827,27674221,27676599,27679639,27680061,27681696,27682498,27682703,27687507,27688423,27689203,27691928,27692656,27695563	Gene ID= ENSG00000110841.13 TPM= 14.07 Transcript Type= protein_coding
chr12	27710773	27756295	27710773	27756295	+	ENST00000081029.7@MRPS35	ENST00000081029.7	protein_coding	27710773,27714780,27716291,27719808,27724047,27735447,27737539,27755181	27710955,27714820,27716458,27719868,27724186,27735556,27737608,27756295	Gene ID= ENSG00000061794.12 TPM= 163.57 Transcript Type= protein_coding
chr12	27710835	27756294	27710835	27756294	+	ENST00000538315.5@MRPS35	ENST00000538315.5	protein_coding	27710835,27714780,27716291,27719808,27724047,27737539,27755181	27710955,27714820,27716458,27719868,27724186,27737608,27756294	Gene ID= ENSG00000061794.12 TPM= 4.25 Transcript Type= protein_coding
chr12	28190438	28550165	28190438	28550165	+	transcript1359.chr12.nnic@CCDC91	transcript1359.chr12.nnic	protein_coding	28190438,28225795,28257202,28259364,28305649,28306742,28307645,28362438,28391304,28450161,28450350,28452478,28484052,28549063	28190641,28225861,28257245,28259442,28305806,28306945,28307749,28362515,28391411,28450253,28450418,28452654,28484165,28550165	Gene ID= ENSG00000123106.10 TPM= 5.31 Transcript Type= NA
chr12	28190426	28550165	28190426	28550165	+	transcript1360.chr12.nic@CCDC91	transcript1360.chr12.nic	protein_coding	28190426,28257202,28259364,28305649,28306742,28307645,28362438,28391304,28450161,28450350,28452478,28484052,28549063	28190641,28257245,28259442,28305779,28306945,28307749,28362515,28391411,28450253,28450418,28452654,28484165,28550165	Gene ID= ENSG00000123106.10 TPM= 2.12 Transcript Type= NA
chr12	28190426	28452527	28190426	28452527	+	transcript1364.chr12.nic@CCDC91	transcript1364.chr12.nic	protein_coding	28190426,28257202,28259364,28304626,28305649,28306742,28307645,28362438,28391304,28450161,28450350,28452478	28190641,28257245,28259442,28304711,28305806,28306945,28307749,28362515,28391411,28450253,28450418,28452527	Gene ID= ENSG00000123106.10 TPM= 2.47 Transcript Type= NA
chr12	28190427	28550166	28190427	28550166	+	ENST00000539107.5@CCDC91	ENST00000539107.5	protein_coding	28190427,28257202,28259364,28305649,28306742,28307645,28362438,28450161,28450350,28452478,28484052,28549063	28190641,28257245,28259442,28305806,28306945,28307749,28362515,28450253,28450418,28452654,28484165,28550166	Gene ID= ENSG00000123106.10 TPM= 2.12 Transcript Type= protein_coding
chr12	28190427	28452527	28190427	28452527	+	transcript1377.chr12.nic@CCDC91	transcript1377.chr12.nic	protein_coding	28190427,28305649,28306742,28307645,28362438,28391304,28450161,28450350,28452478	28190641,28305806,28306945,28307749,28362515,28391411,28450253,28450418,28452527	Gene ID= ENSG00000123106.10 TPM= 3.54 Transcript Type= NA
chr12	28190438	28452636	28190438	28452636	+	ENST00000536442.5@CCDC91	ENST00000536442.5	protein_coding	28190438,28257202,28259364,28305649,28306742,28307645,28362438,28391304,28450161,28450350,28452478	28190641,28257245,28259442,28305806,28306945,28307749,28362515,28391411,28450253,28450418,28452636	Gene ID= ENSG00000123106.10 TPM= 1.06 Transcript Type= non_stop_decay
chr12	28188330	28190738	28188330	28190738	-	ENST00000617468.1@AC022364.1	ENST00000617468.1	antisense_RNA	28188330	28190738	Gene ID= ENSG00000247934.4 TPM= 7.44 Transcript Type= antisense_RNA
chr12	29337352	29381153	29337352	29381153	-	ENST00000360150.8@ERGIC2	ENST00000360150.8	protein_coding	29381115,29371528,29370114,29368241,29366877,29361645,29357623,29356382,29350013,29349079,29345443,29343120,29341734,29337352	29381153,29371670,29370222,29368287,29366947,29361685,29357724,29356477,29350068,29349177,29345540,29343282,29341816,29341218	Gene ID= ENSG00000087502.17 TPM= 8.5 Transcript Type= protein_coding
chr12	29505982	29783912	29505982	29783912	-	transcript1393.chr12.nnic@TMTC1	transcript1393.chr12.nnic	protein_coding	29783450,29767898,29758704,29755709,29660804,29659880,29633147,29604178,29583407,29572105,29556857,29536209,29520618,29518472,29517427,29516349,29514482,29512043,29505982	29783912,29768075,29758777,29755885,29660885,29659983,29633336,29604299,29583574,29572218,29557000,29536317,29520720,29518607,29517571,29516486,29514604,29512120,29506986	Gene ID= ENSG00000133687.15 TPM= 5.31 Transcript Type= NA
chr12	30628988	30695986	30628988	30695986	-	ENST00000256079.8@IPO8	ENST00000256079.8	protein_coding	30695564,30690496,30684301,30681659,30680482,30676498,30674659,30673990,30670962,30669183,30666175,30665729,30665220,30663489,30662327,30661141,30656684,30652967,30652192,30649137,30639515,30636982,30634083,30631895,30628988	30695986,30690577,30684457,30681817,30680638,30676587,30674753,30674074,30671096,30669282,30666251,30665845,30665309,30663654,30662487,30661266,30656750,30653092,30652289,30649232,30639735,30637187,30634286,30632011,30630957	Gene ID= ENSG00000133704.9 TPM= 9.56 Transcript Type= protein_coding
chr12	30716623	30754955	30716623	30754955	-	transcript1417.chr12.nic@CAPRIN2	transcript1417.chr12.nic	protein_coding	30754681,30753344,30751071,30741020,30734968,30733629,30731343,30730239,30728648,30725966,30724370,30723259,30720811,30719079,30716623	30754955,30753559,30751133,30741106,30735206,30733711,30731510,30730282,30729325,30726088,30724451,30723314,30720915,30719225,30716676	Gene ID= ENSG00000110888.17 TPM= 3.72 Transcript Type= NA
chr12	30752091	30754862	30752091	30754862	-	transcript1426.chr12.nnic@NA	transcript1426.chr12.nnic	NA	30752091	30754862	Gene ID= novel_gene_chr12_1427 TPM= 2.12 Transcript Type= NA
chr12	31280584	31326372	31280584	31326372	-	ENST00000337682.8@FAM60A	ENST00000337682.8	protein_coding	31326024,31298077,31295234,31293805,31287634,31280584	31326372,31298224,31295333,31293931,31287784,31282871	Gene ID= ENSG00000139146.13 TPM= 3.19 Transcript Type= protein_coding
chr12	31387393	31591039	31387393	31591039	-	transcript1437.chr12.nnic@DENND5B	transcript1437.chr12.nnic	protein_coding	31590706,31499606,31495810,31479589,31460194,31451940,31447538,31442775,31433155,31432043,31426293,31424535,31423597,31415367,31413436,31409263,31402498,31399654,31398175,31392614,31392267,31389324,31387393	31591039,31499671,31495919,31480255,31460381,31452476,31447769,31442925,31433248,31432153,31426424,31424687,31423675,31415448,31413564,31409384,31402643,31399772,31398362,31392696,31392393,31389498,31387786	Gene ID= ENSG00000170456.15 TPM= 5.66 Transcript Type= NA
chr12	31451316	31591003	31451316	31591003	-	transcript1450.chr12.nic@DENND5B	transcript1450.chr12.nic	protein_coding	31590706,31495810,31479589,31460194,31451316	31591003,31495919,31480255,31460381,31452476	Gene ID= ENSG00000170456.15 TPM= 2.47 Transcript Type= NA
chr12	31432375	31591012	31432375	31591012	-	ENST00000354285.8@DENND5B	ENST00000354285.8	protein_coding	31590706,31499606,31495810,31479589,31460194,31451940,31447538,31442775,31432375	31591012,31499671,31495919,31480255,31460381,31452476,31447769,31442925,31433248	Gene ID= ENSG00000170456.15 TPM= 2.47 Transcript Type= protein_coding
chr12	31588621	31590420	31588621	31590420	-	transcript1453.chr12.nnic@NA	transcript1453.chr12.nnic	NA	31588621	31590420	Gene ID= novel_gene_chr12_1454 TPM= 2.12 Transcript Type= NA
chr12	31659688	31673114	31659688	31673114	+	ENST00000357721.3@ETFBKMT	ENST00000357721.3	protein_coding	31659688,31661841,31666087,31667647	31659789,31662267,31666217,31673114	Gene ID= ENSG00000139160.13 TPM= 1.06 Transcript Type= protein_coding
chr12	31671137	31729174	31671137	31729174	-	ENST00000281471.10@AMN1	ENST00000281471.10	protein_coding	31728971,31709293,31701863,31697740,31697361,31689007,31671137	31729174,31709425,31702007,31697957,31697417,31689118,31672377	Gene ID= ENSG00000151743.10 TPM= 1.06 Transcript Type= protein_coding
chr12	32106875	32305820	32106875	32305820	+	transcript1486.chr12.nic@BICD1	transcript1486.chr12.nic	protein_coding	32106875,32216247,32293994,32305697	32107544,32216459,32294146,32305820	Gene ID= ENSG00000151746.13 TPM= 2.12 Transcript Type= NA
chr12	32399523	32633660	32399523	32633660	+	transcript1488.chr12.nic@FGD4	transcript1488.chr12.nic	protein_coding	32399523,32564137,32576266,32581960,32598497,32601278,32602161,32607957,32610776,32611137,32619698,32624422,32624976,32625654,32633549	32399959,32564289,32576449,32582467,32598586,32601423,32602317,32608095,32610834,32611283,32619870,32624452,32625068,32625779,32633660	Gene ID= ENSG00000139132.14 TPM= 4.25 Transcript Type= NA
chr12	32502043	32582955	32502043	32582955	+	ENST00000472289.5@FGD4	ENST00000472289.5	protein_coding	32502043,32564137,32576266,32581960	32502338,32564289,32576449,32582955	Gene ID= ENSG00000139132.14 TPM= 1.06 Transcript Type= protein_coding
chr12	32679200	32745552	32679200	32745552	+	ENST00000452533.6@DNM1L	ENST00000452533.6	protein_coding	32679200,32701415,32707367,32708153,32710929,32713209,32718643,32720664,32722427,32731014,32731356,32731854,32733715,32737105,32738264,32740064,32740409,32742589,32743354	32679465,32701562,32707413,32708224,32711015,32713371,32718763,32720795,32722633,32731134,32731511,32731943,32733807,32737161,32738296,32740240,32740518,32742748,32745552	Gene ID= ENSG00000087470.17 TPM= 10.62 Transcript Type= protein_coding
chr12	32679290	32743612	32679290	32743612	+	ENST00000549701.5@DNM1L	ENST00000549701.5	protein_coding	32679290,32701415,32707367,32708153,32710929,32713209,32718643,32720664,32722427,32731014,32731356,32731854,32733715,32737105,32737865,32738264,32740064,32740409,32742589,32743354	32679465,32701562,32707413,32708224,32711015,32713371,32718763,32720795,32722633,32731134,32731511,32731943,32733807,32737161,32737942,32738296,32740240,32740518,32742748,32743612	Gene ID= ENSG00000087470.17 TPM= 5.31 Transcript Type= protein_coding
chr12	32679320	32743581	32679320	32743581	+	ENST00000547312.5@DNM1L	ENST00000547312.5	protein_coding	32679320,32701415,32707367,32708153,32710929,32713209,32718643,32720664,32722427,32731014,32731356,32731854,32733715,32737105,32737865,32740064,32740409,32742589,32743354	32679465,32701562,32707413,32708224,32711015,32713371,32718763,32720795,32722633,32731134,32731511,32731943,32733807,32737161,32737942,32740240,32740518,32742748,32743581	Gene ID= ENSG00000087470.17 TPM= 4.25 Transcript Type= protein_coding
chr12	32705962	32706619	32705962	32706619	-	transcript1515.chr12.nnic@NA	transcript1515.chr12.nnic	NA	32705962	32706619	Gene ID= novel_gene_chr12_1516 TPM= 2.12 Transcript Type= NA
chr12	32790745	32821883	32790745	32821883	-	transcript1551.chr12.nic@PKP2	transcript1551.chr12.nic	protein_coding	32821356,32802403,32796109,32792644,32790745	32821883,32802556,32796298,32792731,32792492	Gene ID= ENSG00000057294.14 TPM= 38.77 Transcript Type= NA
chr12	32790745	32896840	32790745	32896840	-	ENST00000340811.8@PKP2	ENST00000340811.8	protein_coding	32896509,32878920,32877846,32868927,32850766,32841028,32824045,32822467,32821356,32802403,32796109,32792644,32790745	32896840,32879032,32878543,32869062,32850973,32841205,32824162,32822631,32821529,32802556,32796298,32792731,32792492	Gene ID= ENSG00000057294.14 TPM= 361.13 Transcript Type= protein_coding
chr12	32847097	32849022	32847097	32849022	+	transcript1564.chr12.nnic@NA	transcript1564.chr12.nnic	NA	32847097	32849022	Gene ID= novel_gene_chr12_1565 TPM= 5.31 Transcript Type= NA
chr12	32856351	32858083	32856351	32858083	+	transcript1566.chr12.nnic@NA	transcript1566.chr12.nnic	NA	32856351	32858083	Gene ID= novel_gene_chr12_1567 TPM= 15.93 Transcript Type= NA
chr12	34022281	34028302	34022281	34028302	+	ENST00000266483.6@ALG10	ENST00000266483.6	protein_coding	34022281,34023962,34025863	34022770,34024159,34028302	Gene ID= ENSG00000139133.6 TPM= 1.06 Transcript Type= protein_coding
chr12	34029738	34031932	34029738	34031932	-	transcript1574.chr12.nnic@NA	transcript1574.chr12.nnic	NA	34029738	34031932	Gene ID= novel_gene_chr12_1575 TPM= 7.44 Transcript Type= NA
chr12	39351802	39443401	39351802	39443401	-	transcript1581.chr12.nic@KIF21A	transcript1581.chr12.nic	protein_coding	39442927,39370039,39369729,39367883,39367030,39366350,39363098,39358178,39357248,39356832,39351802	39443401,39370261,39369911,39368032,39367164,39366517,39363213,39358373,39357437,39356895,39351980	Gene ID= ENSG00000139116.18 TPM= 13.81 Transcript Type= NA
chr12	39293231	39332408	39293231	39332408	-	ENST00000551264.5@KIF21A	ENST00000551264.5	protein_coding	39332214,39331690,39330746,39326264,39325839,39322668,39319906,39311417,39309586,39307565,39304821,39302965,39301480,39293231	39332408,39331791,39330911,39326324,39325893,39322882,39320013,39311553,39309766,39307729,39304938,39303135,39301679,39294517	Gene ID= ENSG00000139116.18 TPM= 7.44 Transcript Type= protein_coding
chr12	39438176	39441678	39438176	39441678	+	transcript1585.chr12.nnic@NA	transcript1585.chr12.nnic	NA	39438176	39441678	Gene ID= novel_gene_chr12_1586 TPM= 24.43 Transcript Type= NA
chr12	39755021	40106078	39755021	40106078	-	transcript1591.chr12.nnic@SLC2A13	transcript1591.chr12.nnic	protein_coding	40105253,40048051,40028301,39951257,39871798,39864762,39830103,39764737,39764460,39755021	40106078,40048210,40028509,39951365,39871961,39864882,39830228,39764858,39764615,39760252	Gene ID= ENSG00000151229.12 TPM= 12.75 Transcript Type= NA
chr12	40089975	40106067	40089975	40106067	-	transcript1595.chr12.nnic@SLC2A13	transcript1595.chr12.nnic	protein_coding	40105253,40099992,40089975	40106067,40100089,40092933	Gene ID= ENSG00000151229.12 TPM= 2.66 Transcript Type= NA
chr12	40102433	40106043	40102433	40106043	-	transcript1596.chr12.nnic@NA	transcript1596.chr12.nnic	NA	40102433	40106043	Gene ID= novel_gene_chr12_1597 TPM= 2.66 Transcript Type= NA
chr12	40224995	40294890	40224995	40294890	+	transcript1598.chr12.nic@LRRK2	transcript1598.chr12.nic	protein_coding	40224995,40225555,40232274,40235626,40237969,40240483,40243550,40249826,40251232,40251465,40252910,40257248,40259480,40263789,40274583,40274854,40277888,40278091,40283875,40287351,40293545,40294845	40225282,40225640,40232383,40235714,40238103,40240617,40243681,40249945,40251374,40251544,40253016,40257377,40259604,40263901,40274727,40274993,40278016,40278261,40284133,40287539,40293663,40294890	Gene ID= ENSG00000188906.14 TPM= 3.19 Transcript Type= NA
chr12	40223073	40225061	40223073	40225061	-	transcript1599.chr12.nnic@NA	transcript1599.chr12.nnic	NA	40223073	40225061	Gene ID= novel_gene_chr12_1600 TPM= 2.12 Transcript Type= NA
chr12	42081845	42144879	42081845	42144879	-	ENST00000398675.7@GXYLT1	ENST00000398675.7	protein_coding	42144426,42129759,42119000,42109566,42105818,42097910,42097442,42081845	42144879,42129851,42119171,42109691,42106069,42098033,42097614,42087947	Gene ID= ENSG00000151233.10 TPM= 1.06 Transcript Type= protein_coding
chr12	42159124	42237573	42159124	42237573	-	transcript1610.chr12.nnic@YAF2	transcript1610.chr12.nnic	protein_coding	42237416,42210548,42210355,42199136,42161613,42159124	42237573,42210619,42210454,42199235,42161765,42160826	Gene ID= ENSG00000015153.14 TPM= 2.12 Transcript Type= NA
chr12	42159037	42237576	42159037	42237576	-	transcript1617.chr12.nnic@YAF2	transcript1617.chr12.nnic	protein_coding	42237423,42210548,42210355,42161613,42159037	42237576,42210680,42210454,42161765,42160826	Gene ID= ENSG00000015153.14 TPM= 3.19 Transcript Type= NA
chr12	42159037	42237753	42159037	42237753	-	transcript1630.chr12.nic@YAF2	transcript1630.chr12.nic	protein_coding	42237599,42161613,42159037	42237753,42161765,42160826	Gene ID= ENSG00000015153.14 TPM= 3.19 Transcript Type= NA
chr12	42161634	42238314	42161634	42238314	-	transcript1634.chr12.nic@YAF2	transcript1634.chr12.nic	protein_coding	42238155,42237599,42161634	42238314,42237724,42161765	Gene ID= ENSG00000015153.14 TPM= 3.19 Transcript Type= NA
chr12	42161681	42237596	42161681	42237596	-	transcript1635.chr12.nnic@YAF2	transcript1635.chr12.nnic	protein_coding	42237423,42235614,42161681	42237596,42235997,42161765	Gene ID= ENSG00000015153.14 TPM= 2.12 Transcript Type= NA
chr12	42161699	42237800	42161699	42237800	-	ENST00000548917.1@YAF2	ENST00000548917.1	protein_coding	42237599,42161699	42237800,42161765	Gene ID= ENSG00000015153.14 TPM= 3.19 Transcript Type= protein_coding
chr12	42312766	42326118	42312766	42326118	-	transcript1644.chr12.nic@ZCRB1	transcript1644.chr12.nic	protein_coding	42325924,42322418,42317787,42317340,42313874,42313690,42312766	42326118,42322446,42317898,42317447,42313986,42313765,42313198	Gene ID= ENSG00000139168.7 TPM= 5.31 Transcript Type= NA
chr12	42313901	42326141	42313901	42326141	-	transcript1647.chr12.nic@ZCRB1	transcript1647.chr12.nic	protein_coding	42325924,42324019,42322418,42317787,42317340,42313901	42326141,42324104,42322446,42317898,42317447,42313986	Gene ID= ENSG00000139168.7 TPM= 64.79 Transcript Type= NA
chr12	42313690	42326118	42313690	42326118	-	ENST00000552235.1@ZCRB1	ENST00000552235.1	protein_coding	42325924,42322418,42317787,42317340,42313874,42313690	42326118,42322446,42317898,42317447,42313986,42313765	Gene ID= ENSG00000139168.7 TPM= 1.06 Transcript Type= protein_coding
chr12	42312078	42326105	42312078	42326105	-	ENST00000266529.7@ZCRB1	ENST00000266529.7	protein_coding	42325924,42324019,42322418,42317787,42317340,42313874,42313690,42312078	42326105,42324104,42322446,42317898,42317447,42313986,42313765,42313198	Gene ID= ENSG00000139168.7 TPM= 3.19 Transcript Type= protein_coding
chr12	42326150	42448618	42326150	42448618	+	transcript1650.chr12.nic@PPHLN1	transcript1650.chr12.nic	protein_coding	42326150,42335883,42355161,42374863,42387456,42393570,42398854,42441315,42442641,42445991,42446592	42326229,42335974,42355222,42375074,42387535,42393689,42398994,42441429,42442741,42446290,42448618	Gene ID= ENSG00000134283.17 TPM= 2.12 Transcript Type= NA
chr12	42326149	42442181	42326149	42442181	+	ENST00000613154.4@PPHLN1	ENST00000613154.4	protein_coding	42326149,42332660,42335883,42351885,42355161,42374863,42387456,42393570,42398854,42441315	42326229,42332702,42335974,42352049,42355222,42375074,42387535,42393689,42398994,42442181	Gene ID= ENSG00000134283.17 TPM= 1.06 Transcript Type= protein_coding
chr12	42326150	42441955	42326150	42441955	+	transcript1658.chr12.nic@PPHLN1	transcript1658.chr12.nic	protein_coding	42326150,42335883,42355161,42374863,42384940,42387456,42393570,42398854,42441315	42326229,42335974,42355222,42375074,42384996,42387535,42393689,42398994,42441955	Gene ID= ENSG00000134283.17 TPM= 4.51 Transcript Type= NA
chr12	42326150	42441955	42326150	42441955	+	transcript1659.chr12.nic@PPHLN1	transcript1659.chr12.nic	protein_coding	42326150,42335883,42355161,42374863,42387456,42393570,42398854,42441315	42326229,42335974,42355222,42375074,42387535,42393689,42398994,42441955	Gene ID= ENSG00000134283.17 TPM= 7.7 Transcript Type= NA
chr12	42326168	42441963	42326168	42441963	+	ENST00000449194.6@PPHLN1	ENST00000449194.6	protein_coding	42326168,42335883,42351885,42355161,42374863,42387456,42393570,42398854,42441315	42326229,42335974,42352049,42355222,42375074,42387535,42393689,42398994,42441963	Gene ID= ENSG00000134283.17 TPM= 2.39 Transcript Type= protein_coding
chr12	42326171	42441543	42326171	42441543	+	ENST00000552761.5@PPHLN1	ENST00000552761.5	protein_coding	42326171,42332660,42335883,42355161,42374863,42384940,42387456,42393570,42398854,42441315	42326229,42332702,42335974,42355222,42375074,42384996,42387535,42393689,42398994,42441543	Gene ID= ENSG00000134283.17 TPM= 2.12 Transcript Type= protein_coding
chr12	42326157	42441955	42326157	42441955	+	ENST00000358314.11@PPHLN1	ENST00000358314.11	protein_coding	42326157,42335883,42351885,42355161,42374863,42384940,42387456,42393570,42398854,42441315	42326229,42335974,42352049,42355222,42375074,42384996,42387535,42393689,42398994,42441955	Gene ID= ENSG00000134283.17 TPM= 1.33 Transcript Type= protein_coding
chr12	42458829	42589746	42458829	42589746	-	ENST00000639958.1@PRICKLE1	ENST00000639958.1	protein_coding	42589465,42472385,42470246,42469450,42468626,42466194,42464395,42458829	42589746,42472561,42470359,42469587,42468829,42466380,42465258,42460665	Gene ID= ENSG00000139174.11 TPM= 5.31 Transcript Type= protein_coding
chr12	42480851	42484046	42480851	42484046	+	transcript1670.chr12.nnic@NA	transcript1670.chr12.nnic	NA	42480851	42484046	Gene ID= novel_gene_chr12_1671 TPM= 3.19 Transcript Type= NA
chr12	43758944	43789543	43758944	43789543	+	ENST00000431837.5@IRAK4	ENST00000431837.5	protein_coding	43758944,43768103,43772180,43772912,43773965,43777630,43778193,43782307,43783662,43786399,43786680	43759016,43768272,43772362,43773072,43774029,43777744,43778302,43782490,43783724,43786557,43789543	Gene ID= ENSG00000198001.13 TPM= 4.25 Transcript Type= protein_coding
chr12	43793723	43806375	43793723	43806375	-	ENST00000395510.6@TWF1	ENST00000395510.6	protein_coding	43806221,43804495,43802286,43800435,43799398,43797708,43797302,43796976,43793723	43806375,43804572,43802464,43800530,43799502,43797833,43797452,43797097,43795755	Gene ID= ENSG00000151239.13 TPM= 23.37 Transcript Type= protein_coding
chr12	43836098	44389758	43836098	44389758	+	ENST00000266534.7@TMEM117	ENST00000266534.7	protein_coding	43836098,43844624,43944210,44143525,44211290,44299580,44376595,44388026	43836196,43844928,43944342,44143624,44211387,44299739,44376724,44389758	Gene ID= ENSG00000139173.9 TPM= 13.28 Transcript Type= protein_coding
chr12	43836083	44389758	43836083	44389758	+	ENST00000551577.5@TMEM117	ENST00000551577.5	protein_coding	43836083,43844624,43944210,44143525,44211290,44299580,44388026	43836196,43844928,43944342,44143624,44211387,44299739,44389758	Gene ID= ENSG00000139173.9 TPM= 3.72 Transcript Type= protein_coding
chr12	45173064	45216006	45173064	45216006	-	ENST00000256692.5@PLEKHA8P1	ENST00000256692.5	transcribed_processed_pseudogene	45215940,45176241,45173064	45216006,45176433,45174642	Gene ID= ENSG00000134297.6 TPM= 1.06 Transcript Type= processed_transcript
chr12	45292683	45432351	45292683	45432351	+	ENST00000441606.2@ANO6	ENST00000441606.2	protein_coding	45292683,45302014,45331295,45347022,45348028,45348518,45350659,45357290,45367688,45378053,45388161,45390421,45401795,45403072,45403439,45409357,45416699,45421071,45422957,45429105	45292934,45302093,45331423,45347087,45348315,45348631,45350774,45357424,45367793,45378113,45388303,45390498,45402020,45403241,45403536,45409487,45416904,45421273,45423062,45432351	Gene ID= ENSG00000177119.15 TPM= 14.87 Transcript Type= protein_coding
chr12	45216020	45440404	45216020	45440404	+	ENST00000425752.6@ANO6	ENST00000425752.6	protein_coding	45216020,45302014,45331295,45347022,45348028,45348518,45350659,45357290,45367688,45378053,45388161,45390421,45401795,45403072,45403439,45409357,45416699,45421071,45422957,45439675	45216391,45302093,45331423,45347087,45348315,45348631,45350774,45357424,45367793,45378113,45388303,45390498,45402020,45403241,45403536,45409487,45416904,45421273,45423062,45440404	Gene ID= ENSG00000177119.15 TPM= 4.25 Transcript Type= protein_coding
chr12	45219505	45222172	45219505	45222172	-	transcript1704.chr12.nnic@NA	transcript1704.chr12.nnic	NA	45219505	45222172	Gene ID= novel_gene_chr12_1705 TPM= 16.99 Transcript Type= NA
chr12	45240353	45242697	45240353	45242697	-	transcript1706.chr12.nnic@NA	transcript1706.chr12.nnic	NA	45240353	45242697	Gene ID= novel_gene_chr12_1707 TPM= 10.62 Transcript Type= NA
chr12	45378120	45381265	45378120	45381265	-	transcript1708.chr12.nnic@NA	transcript1708.chr12.nnic	NA	45378120	45381265	Gene ID= novel_gene_chr12_1709 TPM= 3.19 Transcript Type= NA
chr12	45698049	45699511	45698049	45699511	-	transcript1710.chr12.nnic@NA	transcript1710.chr12.nnic	NA	45698049	45699511	Gene ID= novel_gene_chr12_1711 TPM= 2.12 Transcript Type= NA
chr12	45723607	45727968	45723607	45727968	-	transcript1714.chr12.nnic@NA	transcript1714.chr12.nnic	NA	45723607	45727968	Gene ID= novel_gene_chr12_1715 TPM= 9.56 Transcript Type= NA
chr12	45726025	45727943	45726025	45727943	-	transcript1712.chr12.nnic@NA	transcript1712.chr12.nnic	NA	45726025	45727943	Gene ID= novel_gene_chr12_1713 TPM= 20.18 Transcript Type= NA
chr12	45920981	45990574	45920981	45990574	-	transcript1720.chr12.nnic@SCAF11	transcript1720.chr12.nnic	protein_coding	45990353,45964107,45961700,45951650,45948437,45945249,45934447,45934176,45933131,45931506,45928653,45926142,45924728,45922936,45922463,45920981	45990574,45964188,45961857,45951727,45948537,45945313,45934505,45934285,45933232,45931612,45928859,45926291,45925074,45923154,45922582,45922194	Gene ID= ENSG00000139218.17 TPM= 3.19 Transcript Type= NA
chr12	45926716	45990594	45926716	45990594	-	transcript1724.chr12.nic@SCAF11	transcript1724.chr12.nic	protein_coding	45990353,45964107,45961700,45951650,45948437,45945249,45934447,45934176,45933131,45931506,45926716	45990594,45964188,45961857,45951727,45948537,45945313,45934505,45934285,45933232,45931612,45928859	Gene ID= ENSG00000139218.17 TPM= 39.92 Transcript Type= NA
chr12	45926716	45992143	45926716	45992143	-	transcript1725.chr12.nic@SCAF11	transcript1725.chr12.nic	protein_coding	45991885,45964107,45961700,45951650,45948437,45945249,45934447,45934176,45933131,45931506,45926716	45992143,45964188,45961857,45951727,45948537,45945313,45934505,45934285,45933232,45931612,45928859	Gene ID= ENSG00000139218.17 TPM= 5.93 Transcript Type= NA
chr12	45960455	45992143	45960455	45992143	-	transcript1730.chr12.nic@SCAF11	transcript1730.chr12.nic	protein_coding	45991885,45964107,45961700,45960455	45992143,45964188,45961857,45961322	Gene ID= ENSG00000139218.17 TPM= 2.12 Transcript Type= NA
chr12	45919131	45990565	45919131	45990565	-	ENST00000369367.7@SCAF11	ENST00000369367.7	protein_coding	45990353,45964107,45961700,45951650,45948437,45945249,45934447,45934176,45933131,45931506,45926142,45924728,45922936,45922463,45919131	45990565,45964188,45961857,45951727,45948537,45945313,45934505,45934285,45933232,45931612,45928859,45925074,45923154,45922582,45922194	Gene ID= ENSG00000139218.17 TPM= 16.2 Transcript Type= protein_coding
chr12	45926716	45992120	45926716	45992120	-	ENST00000547018.5@SCAF11	ENST00000547018.5	protein_coding	45991885,45964107,45961696,45951650,45948437,45945249,45934447,45934176,45933131,45931506,45926716	45992120,45964188,45961857,45951752,45948537,45945313,45934505,45934285,45933232,45931612,45928859	Gene ID= ENSG00000139218.17 TPM= 15.49 Transcript Type= non_stop_decay
chr12	45960455	45990580	45960455	45990580	-	ENST00000395453.2@SCAF11	ENST00000395453.2	protein_coding	45990353,45964107,45961700,45960455	45990580,45964188,45961857,45961322	Gene ID= ENSG00000139218.17 TPM= 21.24 Transcript Type= protein_coding
chr12	46183063	46269012	46183063	46269012	-	ENST00000398637.9@SLC38A1	ENST00000398637.9	protein_coding	46268526,46243200,46239679,46229564,46229153,46209054,46207529,46207155,46206080,46204532,46204301,46203010,46201098,46198625,46197919,46197720,46183063	46269012,46243314,46239893,46229639,46229268,46209127,46207621,46207236,46206162,46204590,46204417,46203089,46201198,46198743,46198060,46197817,46189071	Gene ID= ENSG00000111371.15 TPM= 38.24 Transcript Type= protein_coding
chr12	46187801	46269037	46187801	46269037	-	transcript1745.chr12.nic@SLC38A1	transcript1745.chr12.nic	protein_coding	46268865,46229564,46229153,46209054,46207529,46207155,46206080,46204532,46204301,46203010,46201098,46198625,46197919,46197720,46187801	46269037,46229639,46229268,46209127,46207621,46207236,46206162,46204590,46204417,46203089,46201198,46198743,46198060,46197817,46189071	Gene ID= ENSG00000111371.15 TPM= 3.19 Transcript Type= NA
chr12	46358189	46372867	46358189	46372867	-	ENST00000256689.9@SLC38A2	ENST00000256689.9	protein_coding	46372509,46371178,46370776,46370512,46367267,46367076,46366864,46365107,46364644,46364389,46363924,46363726,46363021,46362494,46362284,46358189	46372867,46371379,46370857,46370627,46367340,46367168,46366945,46365189,46364702,46364556,46364003,46363826,46363145,46362638,46362381,46361209	Gene ID= ENSG00000134294.13 TPM= 52.05 Transcript Type= protein_coding
chr12	46383671	46652577	46383671	46652577	+	transcript1751.chr12.nnic@AC008014.1	transcript1751.chr12.nnic	lincRNA	46383671,46387747,46470153,46652390	46383713,46387972,46470262,46652577	Gene ID= ENSG00000257261.5 TPM= 8.5 Transcript Type= NA
chr12	47661249	47706061	47661249	47706061	-	ENST00000005386.7@RPAP3	ENST00000005386.7	protein_coding	47705952,47702688,47701464,47697597,47696276,47690518,47689125,47687876,47686780,47681696,47679704,47679493,47670107,47668916,47667754,47666980,47661249	47706061,47702846,47701604,47697719,47696403,47690639,47689195,47688001,47686907,47681817,47679774,47679594,47670345,47669102,47667851,47667080,47663590	Gene ID= ENSG00000005175.9 TPM= 3.19 Transcript Type= protein_coding
chr12	47773208	47782753	47773208	47782753	+	ENST00000442218.2@SLC48A1	ENST00000442218.2	protein_coding	47773208,47779028,47780145	47773440,47779195,47782753	Gene ID= ENSG00000211584.13 TPM= 57.36 Transcript Type= protein_coding
chr12	48105923	48146104	48105923	48146104	+	ENST00000340802.10@PFKM	ENST00000340802.10	protein_coding	48105923,48107365,48108072,48122767,48130363,48131316,48132868,48133315,48134232,48134721,48134943,48135291,48137721,48139285,48139849,48140722,48141311,48141740,48141914,48142782,48143753,48144046,48145031,48145210,48145564	48106137,48107455,48108194,48122859,48130436,48131393,48133057,48133480,48134276,48134829,48135038,48135383,48137846,48139349,48139912,48140871,48141381,48141827,48142066,48142946,48143814,48144157,48145130,48145315,48146104	Gene ID= ENSG00000152556.15 TPM= 5.97 Transcript Type= protein_coding
chr12	48119226	48146404	48119226	48146404	+	ENST00000359794.9@PFKM	ENST00000359794.9	protein_coding	48119226,48122767,48130363,48131316,48132868,48133315,48134232,48134721,48134943,48135291,48137721,48139285,48139849,48140722,48141311,48141740,48141914,48142782,48143753,48144046,48145031,48145210,48145564	48119406,48122859,48130436,48131393,48133057,48133480,48134276,48134829,48135038,48135383,48137846,48139349,48139912,48140871,48141381,48141827,48142066,48142946,48143814,48144157,48145130,48145315,48146404	Gene ID= ENSG00000152556.15 TPM= 15.87 Transcript Type= protein_coding
chr12	48122647	48146104	48122647	48146104	+	ENST00000547587.5@PFKM	ENST00000547587.5	protein_coding	48122647,48130363,48131316,48132868,48133315,48134232,48134721,48134943,48135291,48137721,48139285,48139849,48140722,48141311,48141740,48141914,48142782,48143753,48144046,48145031,48145210,48145564	48122859,48130436,48131393,48133057,48133480,48134276,48134829,48135038,48135383,48137846,48139349,48139912,48140871,48141381,48141827,48142066,48142946,48143814,48144157,48145130,48145315,48146104	Gene ID= ENSG00000152556.15 TPM= 64.39 Transcript Type= protein_coding
chr12	48119343	48146104	48119343	48146104	+	ENST00000546964.5@PFKM	ENST00000546964.5	protein_coding	48119343,48122767,48130363,48131316,48132868,48133315,48134232,48134721,48134943,48137721,48139285,48139849,48140722,48141311,48141740,48141914,48142782,48143753,48144046,48145031,48145210,48145564	48119406,48122859,48130436,48131393,48133057,48133480,48134276,48134829,48135383,48137846,48139349,48139912,48140871,48141381,48141827,48142066,48142946,48143814,48144157,48145130,48145315,48146104	Gene ID= ENSG00000152556.15 TPM= 3.11 Transcript Type= retained_intron
chr12	48146331	48148144	48146331	48148144	+	transcript1835.chr12.nnic@NA	transcript1835.chr12.nnic	NA	48146331	48148144	Gene ID= novel_gene_chr12_1836 TPM= 4.25 Transcript Type= NA
chr12	48147788	48157595	48147788	48157595	-	ENST00000317697.7@ASB8	ENST00000317697.7	protein_coding	48157459,48153368,48151201,48147788	48157595,48153529,48151305,48149998	Gene ID= ENSG00000177981.10 TPM= 23.37 Transcript Type= protein_coding
chr12	48152377	48154498	48152377	48154498	+	transcript1833.chr12.nnic@NA	transcript1833.chr12.nnic	NA	48152377	48154498	Gene ID= novel_gene_chr12_1834 TPM= 3.19 Transcript Type= NA
chr12	48342556	48350891	48342556	48350891	-	ENST00000547026.5@ZNF641	ENST00000547026.5	protein_coding	48350786,48347907,48347252,48345345,48344599,48342556	48350891,48348115,48347343,48345474,48344712,48343727	Gene ID= ENSG00000167528.12 TPM= 1.06 Transcript Type= protein_coding
chr12	48653416	48682254	48653416	48682254	-	transcript1843.chr12.nic@KANSL2	transcript1843.chr12.nic	protein_coding	48682187,48681382,48679655,48679036,48671799,48669106,48667693,48662560,48661195,48660366,48654941,48653416	48682254,48681641,48679833,48679150,48671962,48669272,48667789,48662654,48661243,48660619,48655060,48654175	Gene ID= ENSG00000139620.12 TPM= 3.4 Transcript Type= NA
chr12	48653416	48682254	48653416	48682254	-	transcript1845.chr12.nic@KANSL2	transcript1845.chr12.nic	protein_coding	48682187,48681382,48679655,48679036,48671799,48669106,48667693,48662560,48660366,48654941,48653416	48682254,48681641,48679833,48679150,48671962,48669272,48667789,48662654,48660619,48655060,48654175	Gene ID= ENSG00000139620.12 TPM= 2.87 Transcript Type= NA
chr12	48653416	48682254	48653416	48682254	-	transcript1846.chr12.nic@KANSL2	transcript1846.chr12.nic	protein_coding	48682187,48681571,48679655,48679036,48671799,48669106,48667693,48662560,48660366,48654941,48653416	48682254,48681641,48679833,48679150,48671962,48669272,48667789,48662654,48660619,48655060,48654175	Gene ID= ENSG00000139620.12 TPM= 2.87 Transcript Type= NA
chr12	48653416	48682254	48653416	48682254	-	transcript1850.chr12.nic@KANSL2	transcript1850.chr12.nic	protein_coding	48682187,48681382,48679655,48679036,48671799,48669106,48667693,48660468,48654941,48653416	48682254,48681641,48679833,48679150,48671962,48669272,48667789,48660619,48655060,48654175	Gene ID= ENSG00000139620.12 TPM= 5.52 Transcript Type= NA
chr12	48653416	48682225	48653416	48682225	-	ENST00000420613.6@KANSL2	ENST00000420613.6	protein_coding	48682187,48681382,48679655,48679036,48671799,48669106,48667693,48660366,48654941,48653416	48682225,48681641,48679833,48679150,48671962,48669272,48667789,48660619,48655060,48654175	Gene ID= ENSG00000139620.12 TPM= 27.83 Transcript Type= protein_coding
chr12	48654382	48654518	48654382	48654518	-	ENST00000408564.2@SNORA2C	ENST00000408564.2	snoRNA	48654382	48654518	Gene ID= ENSG00000221491.2 TPM= 1.06 Transcript Type= snoRNA
chr12	48688464	48716898	48688464	48716898	-	ENST00000261900.7@CCNT1	ENST00000261900.7	protein_coding	48716515,48714443,48705768,48701013,48699778,48698138,48695999,48695759,48688464	48716898,48714524,48705896,48701073,48699840,48698183,48696162,48695829,48694436	Gene ID= ENSG00000129315.10 TPM= 3.19 Transcript Type= protein_coding
chr12	48766194	48789077	48766194	48789077	-	transcript1865.chr12.nic@ADCY6	transcript1865.chr12.nic	protein_coding	48788906,48782571,48778108,48777615,48777410,48777104,48776428,48776209,48775963,48775673,48775303,48774957,48774691,48774402,48773940,48773469,48772508,48772295,48771710,48770766,48768937,48766194	48789077,48783438,48778257,48777736,48777521,48777231,48776586,48776350,48776091,48775698,48775450,48775054,48774778,48774518,48774098,48773647,48772543,48772424,48771973,48770970,48769061,48768716	Gene ID= ENSG00000174233.11 TPM= 95.97 Transcript Type= NA
chr12	48766198	48789077	48766198	48789077	-	transcript1868.chr12.nnic@ADCY6	transcript1868.chr12.nnic	protein_coding	48788906,48782571,48778108,48777615,48777410,48777104,48776428,48776209,48775963,48775673,48775303,48774957,48774691,48774402,48773940,48773469,48772508,48772295,48771710,48770766,48768937,48766198	48789077,48783438,48778257,48777736,48777521,48777231,48776586,48776350,48776091,48775698,48775450,48775054,48774778,48774518,48774098,48773647,48772543,48772424,48771973,48770970,48769061,48767507	Gene ID= ENSG00000174233.11 TPM= 13.91 Transcript Type= NA
chr12	48766194	48789077	48766194	48789077	-	transcript1875.chr12.nic@ADCY6	transcript1875.chr12.nic	protein_coding	48788906,48782571,48778108,48777615,48777410,48777104,48776428,48776209,48775963,48775673,48775303,48774957,48774691,48774402,48773469,48772508,48772295,48770766,48768937,48766194	48789077,48783438,48778257,48777736,48777521,48777231,48776586,48776350,48776091,48775698,48775450,48775054,48774778,48774518,48774098,48772543,48772424,48771973,48769061,48768716	Gene ID= ENSG00000174233.11 TPM= 30.29 Transcript Type= NA
chr12	48766198	48789037	48766198	48789037	-	ENST00000550422.5@ADCY6	ENST00000550422.5	protein_coding	48788906,48782571,48778108,48777615,48777410,48777104,48776428,48776209,48775963,48775673,48775303,48774957,48774691,48774402,48773469,48772508,48772295,48771710,48770766,48768937,48766198	48789037,48783438,48778257,48777736,48777521,48777231,48776586,48776350,48776091,48775698,48775450,48775054,48774778,48774518,48773647,48772543,48772424,48771973,48770970,48769061,48768716	Gene ID= ENSG00000174233.11 TPM= 34.18 Transcript Type= protein_coding
chr12	48779075	48781212	48779075	48781212	+	transcript1880.chr12.nnic@NA	transcript1880.chr12.nnic	NA	48779075	48781212	Gene ID= novel_gene_chr12_1881 TPM= 24.43 Transcript Type= NA
chr12	48781058	48784253	48781058	48784253	+	transcript1884.chr12.nnic@NA	transcript1884.chr12.nnic	NA	48781058	48784253	Gene ID= novel_gene_chr12_1885 TPM= 8.5 Transcript Type= NA
chr12	48818731	48828941	48818731	48828941	+	ENST00000301050.6@CACNB3	ENST00000301050.6	protein_coding	48818731,48823344,48823681,48824258,48824669,48824949,48825163,48825434,48825660,48826367,48826759,48826974,48827585	48818974,48823466,48823803,48824373,48824733,48824968,48825243,48825492,48825769,48826518,48826854,48827123,48828941	Gene ID= ENSG00000167535.7 TPM= 3.19 Transcript Type= protein_coding
chr12	48829764	48852163	48829764	48852163	-	ENST00000308025.7@DDX23	ENST00000308025.7	protein_coding	48852084,48845574,48843940,48840013,48839844,48837942,48837524,48837281,48836894,48836569,48836121,48834320,48833277,48832422,48832078,48831142,48829764	48852163,48845782,48844050,48840106,48839909,48838080,48837657,48837393,48837037,48836794,48836266,48834497,48833519,48832573,48832186,48831316,48830692	Gene ID= ENSG00000174243.9 TPM= 18.06 Transcript Type= protein_coding
chr12	48857145	48865898	48857145	48865898	-	ENST00000309739.5@RND1	ENST00000309739.5	protein_coding	48865648,48864783,48862009,48860997,48857145	48865898,48864870,48862118,48861131,48858241	Gene ID= ENSG00000172602.9 TPM= 1.06 Transcript Type= protein_coding
chr12	48915116	48917276	48915116	48917276	-	transcript1898.chr12.nnic@NA	transcript1898.chr12.nnic	NA	48915116	48917276	Gene ID= novel_gene_chr12_1899 TPM= 4.25 Transcript Type= NA
chr12	48921959	48925827	48921959	48925827	-	ENST00000550765.5@FKBP11	ENST00000550765.5	protein_coding	48925300,48925046,48924561,48924223,48923782,48921959	48925827,48925111,48924648,48924256,48923852,48922201	Gene ID= ENSG00000134285.10 TPM= 3.19 Transcript Type= protein_coding
chr12	48935723	48957551	48935723	48957551	-	ENST00000256682.8@ARF3	ENST00000256682.8	protein_coding	48957310,48940948,48939997,48939655,48935723	48957551,48941188,48940107,48939779,48939108	Gene ID= ENSG00000134287.9 TPM= 5.31 Transcript Type= protein_coding
chr12	49002281	49019197	49002281	49019197	-	ENST00000548065.5@PRKAG1	ENST00000548065.5	protein_coding	49018732,49013062,49005743,49005462,49005306,49005120,49004964,49004507,49003757,49003558,49003144,49002281	49019197,49013110,49005852,49005543,49005364,49005165,49005018,49004633,49003922,49003595,49003290,49003006	Gene ID= ENSG00000181929.11 TPM= 62.67 Transcript Type= protein_coding
chr12	49002278	49018764	49002278	49018764	-	ENST00000547306.5@PRKAG1	ENST00000547306.5	protein_coding	49018732,49013062,49005462,49005306,49005120,49004964,49004507,49003757,49003558,49003144,49002278	49018764,49013110,49005543,49005364,49005165,49005018,49004633,49003922,49003595,49003290,49003006	Gene ID= ENSG00000181929.11 TPM= 40.36 Transcript Type= protein_coding
chr12	49096551	49110898	49096551	49110898	-	ENST00000267102.12@LMBR1L	ENST00000267102.12	protein_coding	49110484,49106961,49105924,49104746,49104448,49103687,49103091,49102887,49102468,49102293,49102120,49101472,49101250,49100556,49100388,49097944,49096551	49110898,49107045,49105957,49104885,49104551,49103813,49103159,49102951,49102540,49102376,49102196,49101549,49101323,49100646,49100454,49098105,49097739	Gene ID= ENSG00000139636.15 TPM= 1.06 Transcript Type= protein_coding
chr12	49097142	49110850	49097142	49110850	-	ENST00000547382.5@LMBR1L	ENST00000547382.5	protein_coding	49110484,49106961,49105924,49104746,49104448,49103687,49103091,49102887,49102468,49102293,49102120,49101472,49101250,49100556,49100388,49097944,49097142	49110850,49107045,49105957,49104885,49104551,49103813,49103159,49102951,49102540,49102376,49102196,49101549,49101263,49100646,49100454,49098105,49097739	Gene ID= ENSG00000139636.15 TPM= 4.25 Transcript Type= protein_coding
chr12	49127782	49131395	49127782	49131395	-	ENST00000336023.9@TUBA1B	ENST00000336023.9	protein_coding	49131298,49129500,49129242,49127782	49131395,49129722,49129390,49128938	Gene ID= ENSG00000123416.15 TPM= 278.82 Transcript Type= protein_coding
chr12	49127785	49272694	49127785	49272694	-	transcript1945.chr12.nnic@AC010173.1	transcript1945.chr12.nnic	antisense_RNA	49272459,49127785	49272694,49128785	Gene ID= ENSG00000258101.2 TPM= 30.27 Transcript Type= NA
chr12	49184795	49272694	49184795	49272694	-	transcript1946.chr12.nnic@AC010173.1	transcript1946.chr12.nnic	antisense_RNA	49272631,49184795	49272694,49185671	Gene ID= ENSG00000258101.2 TPM= 18.59 Transcript Type= NA
chr12	49184799	49272662	49184799	49272662	-	transcript1949.chr12.nnic@AC010173.1	transcript1949.chr12.nnic	antisense_RNA	49272459,49184799	49272662,49185837	Gene ID= ENSG00000258101.2 TPM= 20.53 Transcript Type= NA
chr12	49135464	49136835	49135464	49136835	-	transcript1951.chr12.nnic@NA	transcript1951.chr12.nnic	NA	49135464	49136835	Gene ID= novel_gene_chr12_1952 TPM= 4.25 Transcript Type= NA
chr12	49184796	49189324	49184796	49189324	-	ENST00000301071.11@TUBA1A	ENST00000301071.11	protein_coding	49188977,49186611,49186310,49184796	49189324,49186833,49186458,49185990	Gene ID= ENSG00000167552.13 TPM= 571.79 Transcript Type= protein_coding
chr12	49346917	49353684	49346917	49353684	+	ENST00000549441.6@DNAJC22	ENST00000549441.6	protein_coding	49346917,49347644,49348766,49351317	49347551,49348105,49349712,49353684	Gene ID= ENSG00000178401.14 TPM= 1.06 Transcript Type= protein_coding
chr12	49367296	49526365	49367296	49526365	+	transcript1956.chr12.nnic@SPATS2	transcript1956.chr12.nnic	protein_coding	49367296,49371228,49460770,49484590,49489465,49490682,49494741,49500070,49514555,49519073,49522751,49524682,49525944	49367587,49371290,49461037,49484669,49489573,49490731,49495002,49500205,49514613,49519182,49522853,49524896,49526365	Gene ID= ENSG00000123352.17 TPM= 2.12 Transcript Type= NA
chr12	49366905	49526365	49366905	49526365	+	ENST00000549412.5@SPATS2	ENST00000549412.5	protein_coding	49366905,49371228,49460770,49484590,49489465,49490682,49494741,49496833,49500070,49512862,49514555,49519073,49522751,49524682,49525944	49367587,49371290,49461037,49484669,49489573,49490731,49495002,49497009,49500205,49512905,49514613,49519182,49522853,49524896,49526365	Gene ID= ENSG00000123352.17 TPM= 1.06 Transcript Type= nonsense_mediated_decay
chr12	49367462	49491159	49367462	49491159	+	ENST00000549375.5@SPATS2	ENST00000549375.5	protein_coding	49367462,49460770,49484590,49489465,49490682	49367587,49461037,49484669,49489573,49491159	Gene ID= ENSG00000123352.17 TPM= 1.06 Transcript Type= retained_intron
chr12	49546882	49549911	49546882	49549911	-	transcript1984.chr12.nnic@NA	transcript1984.chr12.nnic	NA	49546882	49549911	Gene ID= novel_gene_chr12_1985 TPM= 2.12 Transcript Type= NA
chr12	49558302	49565230	49558302	49565230	-	transcript1980.chr12.nnic@MCRS1	transcript1980.chr12.nnic	protein_coding	49565087,49564737,49564481,49563438,49563001,49560295,49559939,49559729,49559453,49559214,49558843,49558302	49565230,49564895,49564590,49563546,49563139,49560370,49559967,49559821,49559535,49559301,49558970,49558729	Gene ID= ENSG00000187778.13 TPM= 15.35 Transcript Type= NA
chr12	49558320	49568153	49558320	49568153	-	ENST00000343810.8@MCRS1	ENST00000343810.8	protein_coding	49568048,49566722,49566077,49565529,49564737,49564481,49563438,49563001,49560295,49559939,49559729,49559453,49559214,49558843,49558320	49568153,49566841,49566215,49565667,49564895,49564590,49563546,49563139,49560370,49559967,49559821,49559535,49559301,49558970,49558729	Gene ID= ENSG00000187778.13 TPM= 129.76 Transcript Type= protein_coding
chr12	49569399	49571337	49569399	49571337	-	transcript1986.chr12.nnic@NA	transcript1986.chr12.nnic	NA	49569399	49571337	Gene ID= novel_gene_chr12_1987 TPM= 5.31 Transcript Type= NA
chr12	49623401	49643724	49623401	49643724	+	transcript1995.chr12.nic@PRPF40B	transcript1995.chr12.nic	protein_coding	49623401,49630545,49631401,49631860,49632596,49632855,49633014,49633427,49633637,49633886,49634332,49634538,49635099,49635365,49635843,49636716,49637470,49637733,49641908,49642235,49642580,49642930,49643223,49643691	49623593,49630625,49631544,49631925,49632623,49632880,49633124,49633547,49633661,49634092,49634455,49634602,49635263,49635473,49635993,49636849,49637584,49637824,49642024,49642372,49642675,49643016,49643397,49643724	Gene ID= ENSG00000110844.13 TPM= 7.97 Transcript Type= NA
chr12	49623778	49643724	49623778	49643724	+	transcript1997.chr12.nnic@PRPF40B	transcript1997.chr12.nnic	protein_coding	49623778,49630545,49631401,49631860,49632596,49632855,49633014,49633427,49633637,49633886,49634332,49634538,49635099,49635365,49635843,49636716,49637470,49637733,49641908,49642235,49642580,49642930,49643223,49643691	49623819,49630625,49631544,49631925,49632623,49632880,49633124,49633547,49633661,49634092,49634455,49634602,49635263,49635473,49635993,49636849,49637584,49637824,49642024,49642372,49642675,49643016,49643397,49643724	Gene ID= ENSG00000110844.13 TPM= 4.78 Transcript Type= NA
chr12	49644953	49707393	49644953	49707393	-	ENST00000352151.9@FMNL3	ENST00000352151.9	protein_coding	49707055,49668471,49666127,49665832,49661966,49657082,49656823,49656404,49654910,49654192,49653725,49653226,49651933,49651382,49651168,49650676,49649691,49649470,49649259,49649029,49648193,49647703,49647276,49646886,49644953	49707393,49668554,49666207,49665908,49662049,49657190,49656899,49656497,49654984,49654302,49653874,49653327,49652212,49651450,49651292,49650878,49649925,49649538,49649339,49649158,49648353,49647804,49647368,49647009,49645903	Gene ID= ENSG00000161791.13 TPM= 4.25 Transcript Type= protein_coding
chr12	49641732	49645127	49641732	49645127	+	transcript2003.chr12.nnic@NA	transcript2003.chr12.nnic	NA	49641732	49645127	Gene ID= novel_gene_chr12_2004 TPM= 96.66 Transcript Type= NA
chr12	49693000	49694921	49693000	49694921	+	transcript2005.chr12.nnic@NA	transcript2005.chr12.nnic	NA	49693000	49694921	Gene ID= novel_gene_chr12_2006 TPM= 2.12 Transcript Type= NA
chr12	49741528	49764933	49741528	49764933	+	transcript2016.chr12.nic@TMBIM6	transcript2016.chr12.nic	protein_coding	49741528,49752464,49752973,49755635,49758227,49758383,49758683,49761704,49762873	49741611,49752549,49753081,49755755,49758275,49758480,49759321,49761779,49764933	Gene ID= ENSG00000139644.12 TPM= 15.4 Transcript Type= NA
chr12	49741557	49764933	49741557	49764933	+	ENST00000267115.9@TMBIM6	ENST00000267115.9	protein_coding	49741557,49752464,49752973,49755635,49758227,49758383,49758683,49759221,49761704,49762873	49741611,49752549,49753081,49755755,49758275,49758480,49758762,49759321,49761779,49764933	Gene ID= ENSG00000139644.12 TPM= 73.82 Transcript Type= protein_coding
chr12	49791146	49828425	49791146	49828425	-	ENST00000335999.6@NCKAP5L	ENST00000335999.6	protein_coding	49828322,49805980,49803922,49803097,49802958,49801848,49798350,49794765,49793734,49793352,49792678,49792446,49791146	49828425,49806041,49804080,49803165,49802996,49801967,49798463,49797394,49793896,49793433,49792986,49792588,49792051	Gene ID= ENSG00000167566.16 TPM= 50.98 Transcript Type= protein_coding
chr12	49828542	49841143	49828542	49841143	+	ENST00000548872.5@BCDIN3D-AS1	ENST00000548872.5	antisense_RNA	49828542,49828935,49838422	49828748,49829083,49841143	Gene ID= ENSG00000258057.5 TPM= 1.06 Transcript Type= antisense_RNA
chr12	49836039	49843129	49836039	49843129	-	ENST00000333924.5@BCDIN3D	ENST00000333924.5	protein_coding	49842854,49836039	49843129,49839015	Gene ID= ENSG00000186666.5 TPM= 2.12 Transcript Type= protein_coding
chr12	50084972	50100712	50084972	50100712	+	ENST00000394963.8@SMARCD1	ENST00000394963.8	protein_coding	50084972,50086161,50086621,50086756,50087363,50088521,50089884,50090241,50090493,50094437,50096850,50098714,50098947	50085546,50086348,50086663,50086878,50087485,50088637,50089985,50090402,50090590,50094572,50096972,50098815,50100712	Gene ID= ENSG00000066117.14 TPM= 2.12 Transcript Type= protein_coding
chr12	50103819	50111319	50103819	50111319	+	ENST00000301149.7@GPD1	ENST00000301149.7	protein_coding	50103819,50104574,50105548,50106288,50106805,50107567,50108024,50109423	50104091,50104751,50105688,50106426,50106917,50107800,50108130,50111319	Gene ID= ENSG00000167588.12 TPM= 7.44 Transcript Type= protein_coding
chr12	50112204	50120457	50112204	50120457	+	ENST00000550654.1@COX14	ENST00000550654.1	protein_coding	50112204,50118493,50120036	50112301,50118552,50120457	Gene ID= ENSG00000178449.8 TPM= 6.02 Transcript Type= protein_coding
chr12	50111979	50120451	50111979	50120451	+	ENST00000550487.5@COX14	ENST00000550487.5	protein_coding	50111979,50120036	50112301,50120451	Gene ID= ENSG00000178449.8 TPM= 116.49 Transcript Type= protein_coding
chr12	50112237	50120451	50112237	50120451	+	ENST00000548985.1@COX14	ENST00000548985.1	protein_coding	50112237,50120036	50112497,50120451	Gene ID= ENSG00000178449.8 TPM= 2.84 Transcript Type= protein_coding
chr12	50129798	50167350	50129798	50167350	-	transcript2030.chr12.nic@CERS5	transcript2030.chr12.nic	protein_coding	50167101,50143952,50143074,50142053,50138567,50137728,50135941,50135732,50134546,50132962,50129798	50167350,50144057,50143204,50142110,50138617,50137820,50136069,50135838,50134702,50133064,50130694	Gene ID= ENSG00000139624.12 TPM= 5.31 Transcript Type= NA
chr12	50129306	50167533	50129306	50167533	-	ENST00000422340.6@CERS5	ENST00000422340.6	protein_coding	50167101,50144769,50143952,50143074,50142053,50138567,50137728,50135941,50135732,50134546,50129306	50167533,50144969,50144057,50143204,50142110,50138617,50137820,50136069,50135838,50134702,50130694	Gene ID= ENSG00000139624.12 TPM= 1.06 Transcript Type= protein_coding
chr12	50129798	50167422	50129798	50167422	-	ENST00000317551.10@CERS5	ENST00000317551.10	protein_coding	50167101,50143952,50143074,50142053,50138567,50137728,50135941,50135732,50134546,50129798	50167422,50144057,50143204,50142110,50138617,50137820,50136069,50135838,50134702,50130694	Gene ID= ENSG00000139624.12 TPM= 6.37 Transcript Type= protein_coding
chr12	50175788	50283546	50175788	50283546	-	ENST00000341247.8@LIMA1	ENST00000341247.8	protein_coding	50283420,50248633,50231665,50222021,50205984,50204552,50200777,50195830,50192452,50181904,50175788	50283546,50248774,50231710,50222485,50206068,50204700,50200884,50195887,50192561,50182037,50178069	Gene ID= ENSG00000050405.13 TPM= 3.9 Transcript Type= protein_coding
chr12	50175790	50222705	50175790	50222705	-	ENST00000552783.5@LIMA1	ENST00000552783.5	protein_coding	50222021,50205984,50204552,50200777,50195830,50192452,50181904,50175790	50222705,50206068,50204700,50200884,50195887,50192564,50182037,50178069	Gene ID= ENSG00000050405.13 TPM= 3.9 Transcript Type= protein_coding
chr12	50175788	50202112	50175788	50202112	-	ENST00000547825.5@LIMA1	ENST00000547825.5	protein_coding	50200777,50195830,50192452,50181904,50175788	50202112,50195887,50192561,50182037,50178069	Gene ID= ENSG00000050405.13 TPM= 2.84 Transcript Type= protein_coding
chr12	50400809	50479996	50400809	50479996	+	ENST00000293618.12@LARP4	ENST00000293618.12	protein_coding	50400809,50427762,50428935,50430495,50435488,50437735,50440439,50441590,50453460,50454314,50462582,50466959,50473415,50473999,50475526	50401028,50427909,50429090,50430570,50435624,50437838,50440549,50441643,50453672,50454417,50462630,50467120,50473536,50474167,50479996	Gene ID= ENSG00000161813.21 TPM= 12.75 Transcript Type= protein_coding
chr12	50400932	50435599	50400932	50435599	+	ENST00000551886.5@LARP4	ENST00000551886.5	protein_coding	50400932,50427762,50428935,50430498,50435488	50401028,50427909,50429090,50430570,50435599	Gene ID= ENSG00000161813.21 TPM= 1.06 Transcript Type= protein_coding
chr12	50411189	50411431	50411189	50411431	-	transcript2064.chr12.nnic@NA	transcript2064.chr12.nnic	NA	50411189	50411431	Gene ID= novel_gene_chr12_2065 TPM= 2.12 Transcript Type= NA
chr12	50453076	50455650	50453076	50455650	-	transcript2062.chr12.nnic@NA	transcript2062.chr12.nnic	NA	50453076	50455650	Gene ID= novel_gene_chr12_2063 TPM= 6.37 Transcript Type= NA
chr12	50504986	50685111	50504986	50685111	+	transcript2071.chr12.nic@DIP2B	transcript2071.chr12.nic	protein_coding	50504986,50625976,50640724,50660194,50671186,50674474,50675329,50678679,50680672,50683138	50505240,50626047,50640852,50660319,50671398,50674629,50675448,50678876,50680763,50685111	Gene ID= ENSG00000066084.12 TPM= 2.12 Transcript Type= NA
chr12	50504985	50680282	50504985	50680282	+	ENST00000549620.5@DIP2B	ENST00000549620.5	protein_coding	50504985,50625976,50640724,50660194,50671186,50674474,50675329,50678679	50505240,50626047,50640852,50660319,50671398,50674629,50675448,50680282	Gene ID= ENSG00000066084.12 TPM= 2.12 Transcript Type= retained_intron
chr12	50923472	50932510	50923472	50932510	+	ENST00000548553.1@METTL7A	ENST00000548553.1	protein_coding	50923472,50924667,50929914	50924080,50925536,50932510	Gene ID= ENSG00000185432.11 TPM= 5.31 Transcript Type= protein_coding
chr12	50979785	51026369	50979785	51026369	-	transcript2087.chr12.nnic@SLC11A2	transcript2087.chr12.nnic	protein_coding	51026315,51010695,51008476,51005311,51004788,51000313,50999345,50999174,50996817,50995629,50994544,50992810,50992190,50991599,50990795,50988300,50979785	51026369,51010766,51008624,51005436,51004907,51000419,50999415,50999241,50996972,50995787,50994630,50992929,50992339,50991672,50990948,50988435,50981803	Gene ID= ENSG00000110911.14 TPM= 2.12 Transcript Type= NA
chr12	50979820	51026368	50979820	51026368	-	ENST00000546636.5@SLC11A2	ENST00000546636.5	protein_coding	51026315,51010695,51008476,51005311,51004788,51000313,50999345,50999174,50996817,50995629,50994544,50992810,50992190,50991599,50990795,50988382,50981639,50979820	51026368,51010766,51008624,51005436,51004907,51000419,50999415,50999241,50996972,50995787,50994630,50992929,50992339,50991672,50990948,50988435,50981803,50980058	Gene ID= ENSG00000110911.14 TPM= 3.19 Transcript Type= nonsense_mediated_decay
chr12	50981009	51026338	50981009	51026338	-	ENST00000547198.5@SLC11A2	ENST00000547198.5	protein_coding	51026315,51010695,51008476,51005311,51004788,51000313,50999345,50999174,50996817,50995629,50994544,50992810,50992190,50991599,50990795,50988382,50981009	51026338,51010766,51008624,51005436,51004907,51000419,50999415,50999241,50996972,50995787,50994630,50992929,50992339,50991672,50990948,50988435,50981803	Gene ID= ENSG00000110911.14 TPM= 8.5 Transcript Type= protein_coding
chr12	50985992	51026384	50985992	51026384	-	ENST00000262052.9@SLC11A2	ENST00000262052.9	protein_coding	51026310,51010695,51008476,51005311,51004788,51000313,50999345,50999174,50996817,50995629,50994544,50992810,50992190,50991599,50990795,50985992	51026384,51010766,51008624,51005436,51004907,51000419,50999415,50999241,50996972,50995787,50994630,50992929,50992339,50991672,50990948,50988435	Gene ID= ENSG00000110911.14 TPM= 3.19 Transcript Type= protein_coding
chr12	51048318	51060421	51048318	51060421	+	ENST00000262055.8@LETMD1	ENST00000262055.8	protein_coding	51048318,51049034,51052092,51053778,51055835,51056144,51056350,51058032,51059361	51048478,51049185,51052207,51053860,51056021,51056245,51056502,51058128,51060421	Gene ID= ENSG00000050426.15 TPM= 30.8 Transcript Type= protein_coding
chr12	51048301	51060409	51048301	51060409	+	ENST00000547318.5@LETMD1	ENST00000547318.5	protein_coding	51048301,51049034,51053778,51055835,51056144,51056350,51058032,51059361	51048478,51049185,51053860,51056021,51056245,51056502,51058128,51060409	Gene ID= ENSG00000050426.15 TPM= 2.12 Transcript Type= nonsense_mediated_decay
chr12	51048346	51060401	51048346	51060401	+	ENST00000552739.5@LETMD1	ENST00000552739.5	protein_coding	51048346,51055835,51056144,51056350,51058032,51059361	51048478,51056021,51056245,51056502,51058128,51060401	Gene ID= ENSG00000050426.15 TPM= 1.06 Transcript Type= protein_coding
chr12	51077837	51079791	51077837	51079791	+	transcript2107.chr12.nnic@NA	transcript2107.chr12.nnic	NA	51077837	51079791	Gene ID= novel_gene_chr12_2108 TPM= 14.87 Transcript Type= NA
chr12	51201859	51217995	51201859	51217995	-	transcript2117.chr12.nic@POU6F1	transcript2117.chr12.nic	protein_coding	51217642,51206789,51201859	51217995,51206883,51204368	Gene ID= ENSG00000184271.16 TPM= 2.12 Transcript Type= NA
chr12	51238292	51243933	51238292	51243933	+	ENST00000412716.7@DAZAP2	ENST00000412716.7	protein_coding	51238292,51240343,51240871,51242330	51238920,51240461,51241116,51243933	Gene ID= ENSG00000183283.15 TPM= 26.02 Transcript Type= protein_coding
chr12	51238903	51243785	51238903	51243785	+	ENST00000436900.2@DAZAP2	ENST00000436900.2	protein_coding	51238903,51240343,51240899,51242330	51238920,51240461,51241116,51243785	Gene ID= ENSG00000183283.15 TPM= 24.96 Transcript Type= nonsense_mediated_decay
chr12	51244558	51270890	51244558	51270890	-	ENST00000603798.5@SMAGP	ENST00000603798.5	protein_coding	51270256,51269245,51246751,51244558	51270890,51269316,51246831,51246119	Gene ID= ENSG00000170545.16 TPM= 1.06 Transcript Type= protein_coding
chr12	51281038	51324198	51281038	51324198	-	ENST00000615107.4@BIN2	ENST00000615107.4	protein_coding	51324022,51313823,51303087,51302686,51302020,51299607,51299203,51297089,51295796,51291591,51288108,51284716,51281038	51324198,51313903,51303141,51302780,51302115,51299714,51299288,51297164,51295878,51292344,51288188,51284787,51281528	Gene ID= ENSG00000110934.10 TPM= 2.12 Transcript Type= protein_coding
chr12	51281038	51324154	51281038	51324154	-	ENST00000605039.5@BIN2	ENST00000605039.5	protein_coding	51324022,51313823,51303087,51302020,51299607,51299203,51297089,51295796,51291591,51288108,51284716,51281038	51324154,51313903,51303141,51302780,51299714,51299288,51297164,51295878,51292344,51288188,51284787,51281528	Gene ID= ENSG00000110934.10 TPM= 2.12 Transcript Type= retained_intron
chr12	51351247	51383563	51351247	51383563	-	ENST00000543196.6@GALNT6	ENST00000543196.6	protein_coding	51383461,51379291,51377195,51365430,51364121,51360721,51359132,51358130,51357349,51355806,51351247	51383563,51379884,51377367,51365579,51364355,51360838,51359332,51358261,51357450,51355958,51354492	Gene ID= ENSG00000139629.15 TPM= 1.06 Transcript Type= protein_coding
chr12	51912332	51923359	51912332	51923359	+	ENST00000550683.5@ACVRL1	ENST00000550683.5	protein_coding	51912332,51913099,51913559,51913974,51914439,51915225,51916036,51918985,51920759	51912535,51913350,51913770,51914073,51914585,51915500,51916233,51919115,51923359	Gene ID= ENSG00000139567.12 TPM= 7.44 Transcript Type= protein_coding
chr12	51951675	51953607	51951675	51953607	+	transcript2142.chr12.nnic@NA	transcript2142.chr12.nnic	NA	51951675	51953607	Gene ID= novel_gene_chr12_2143 TPM= 2.12 Transcript Type= NA
chr12	52013076	52015889	52013076	52015889	+	transcript2153.chr12.nnic@GRASP	transcript2153.chr12.nnic	protein_coding	52013076,52013872,52014135,52014694	52013775,52013943,52014201,52015889	Gene ID= ENSG00000161835.10 TPM= 30.09 Transcript Type= NA
chr12	52006940	52015864	52006940	52015864	+	ENST00000293662.8@GRASP	ENST00000293662.8	protein_coding	52006940,52009190,52010881,52011039,52013687,52013877,52014135,52014694	52007265,52009239,52010935,52011141,52013780,52013943,52014201,52015864	Gene ID= ENSG00000161835.10 TPM= 25.49 Transcript Type= protein_coding
chr12	52013076	52015596	52013076	52015596	-	transcript2154.chr12.nnic@NA	transcript2154.chr12.nnic	NA	52014135,52013872,52013076	52015596,52013943,52013775	Gene ID= novel_gene_chr12_2155 TPM= 4.6 Transcript Type= NA
chr12	52013076	52015596	52013076	52015596	-	transcript2157.chr12.nnic@NA	transcript2157.chr12.nnic	NA	52013872,52013076	52015596,52013775	Gene ID= novel_gene_chr12_2158 TPM= 3.54 Transcript Type= NA
chr12	52037129	52059501	52037129	52059501	+	transcript2164.chr12.nic@NR4A1	transcript2164.chr12.nic	protein_coding	52037129,52041810,52043802,52054327,52056030,52056494,52057057,52057352,52058688	52037443,52041929,52043911,52055204,52056159,52056645,52057259,52057530,52059501	Gene ID= ENSG00000123358.19 TPM= 33.67 Transcript Type= NA
chr12	52037129	52059501	52037129	52059501	+	transcript2165.chr12.nic@NR4A1	transcript2165.chr12.nic	protein_coding	52037129,52041810,52054327,52056030,52056494,52057057,52057352,52058688	52037443,52041929,52055204,52056159,52056645,52057259,52057530,52059501	Gene ID= ENSG00000123358.19 TPM= 44.29 Transcript Type= NA
chr12	52051402	52059506	52051402	52059506	+	ENST00000243050.5@NR4A1	ENST00000243050.5	protein_coding	52051402,52052496,52054327,52056030,52056494,52057057,52057352,52058688	52051568,52052645,52055204,52056159,52056645,52057259,52057530,52059506	Gene ID= ENSG00000123358.19 TPM= 20.39 Transcript Type= protein_coding
chr12	52051402	52059506	52051402	52059506	+	ENST00000394825.5@NR4A1	ENST00000394825.5	protein_coding	52051402,52054327,52056030,52056494,52057057,52057352,52058688	52051568,52055204,52056159,52056645,52057259,52057530,52059506	Gene ID= ENSG00000123358.19 TPM= 38.45 Transcript Type= protein_coding
chr12	52057370	52059506	52057370	52059506	+	transcript2172.chr12.nnic@NA	transcript2172.chr12.nnic	NA	52057370	52059506	Gene ID= novel_gene_chr12_2173 TPM= 6.59 Transcript Type= NA
chr12	52069971	52077494	52069971	52077494	+	ENST00000336854.8@ATG101	ENST00000336854.8	protein_coding	52069971,52070354,52073575,52076786	52070242,52070483,52073902,52077494	Gene ID= ENSG00000123395.14 TPM= 54.17 Transcript Type= protein_coding
chr12	52079696	52108239	52079696	52108239	+	ENST00000546390.1@OR7E47P	ENST00000546390.1	transcribed_unprocessed_pseudogene	52079696,52083894,52107379	52080181,52083968,52108239	Gene ID= ENSG00000257542.4 TPM= 1.06 Transcript Type= processed_transcript
chr12	52897194	52905333	52897194	52905333	-	transcript2184.chr12.nic@KRT8	transcript2184.chr12.nic	protein_coding	52904658,52901864,52901159,52900588,52899775,52898679,52898461,52897194	52905333,52902072,52901219,52900683,52900065,52898899,52898519,52897618	Gene ID= ENSG00000170421.12 TPM= 280.41 Transcript Type= NA
chr12	52948964	52952901	52948964	52952901	+	ENST00000388835.3@KRT18	ENST00000388835.3	protein_coding	52948964,52950328,52950750,52951481,52951731,52952119,52952722	52949590,52950410,52950906,52951645,52951856,52952342,52952901	Gene ID= ENSG00000111057.10 TPM= 41.42 Transcript Type= protein_coding
chr12	53006158	53042209	53006158	53042209	+	ENST00000262056.13@EIF4B	ENST00000262056.13	protein_coding	53006158,53016473,53018798,53019910,53021806,53022493,53027782,53028015,53033806,53034612,53037409,53038356,53039238,53039630,53040143	53006496,53016610,53019006,53020026,53021860,53022627,53027919,53028188,53034034,53034709,53037622,53038411,53039343,53039702,53042209	Gene ID= ENSG00000063046.17 TPM= 148.7 Transcript Type= protein_coding
chr12	53006456	53040280	53006456	53040280	+	ENST00000420463.7@EIF4B	ENST00000420463.7	protein_coding	53006456,53016473,53018798,53019910,53021806,53022493,53027782,53028015,53033806,53034612,53037409,53038356,53039238,53039630,53040143	53006496,53016610,53019006,53020026,53021860,53022627,53027919,53028188,53034034,53034724,53037622,53038411,53039343,53039702,53040280	Gene ID= ENSG00000063046.17 TPM= 52.05 Transcript Type= protein_coding
chr12	53007422	53008706	53007422	53008706	-	transcript2218.chr12.nnic@NA	transcript2218.chr12.nnic	NA	53007422	53008706	Gene ID= novel_gene_chr12_2219 TPM= 9.56 Transcript Type= NA
chr12	53038970	53047803	53038970	53047803	-	transcript2211.chr12.nnic@AC068888.1	transcript2211.chr12.nnic	antisense_RNA	53046853,53045961,53045600,53045065,53043098,53038970	53047803,53046061,53045653,53045186,53043147,53040263	Gene ID= ENSG00000257337.6 TPM= 2.12 Transcript Type= NA
chr12	53043189	53054438	53043189	53054438	-	ENST00000546793.1@AC068888.1	ENST00000546793.1	antisense_RNA	53054321,53053396,53045961,53043189	53054438,53053574,53046061,53045653	Gene ID= ENSG00000257337.6 TPM= 1.06 Transcript Type= antisense_RNA
chr12	53050186	53064372	53050186	53064372	+	ENST00000549700.5@TNS2	ENST00000549700.5	protein_coding	53050186,53051855,53052455,53053411,53053774,53053965,53054270,53055186,53055568,53055781,53057013,53057567,53057773,53058027,53058316,53058572,53058714,53059047,53060167,53060405,53060675,53061380,53061815,53062153,53062376,53062620,53063089,53063349,53063563,53063744	53050260,53051963,53052492,53053449,53053812,53054014,53054441,53055236,53055690,53055845,53057096,53057679,53057833,53058102,53058445,53058637,53058827,53059971,53060258,53060555,53061264,53061469,53061940,53062245,53062453,53062697,53063257,53063417,53063592,53064372	Gene ID= ENSG00000111077.17 TPM= 33.99 Transcript Type= protein_coding
chr12	53046969	53064369	53046969	53064369	+	ENST00000379902.7@TNS2	ENST00000379902.7	protein_coding	53046969,53051855,53052455,53053411,53053774,53053965,53054270,53055186,53055568,53055781,53057013,53057567,53057773,53058027,53058316,53058572,53058714,53059047,53060405,53060675,53061380,53061815,53062153,53062376,53062620,53063089,53063349,53063563,53063744	53047063,53051963,53052492,53053449,53053812,53054014,53054441,53055236,53055690,53055845,53057096,53057679,53057833,53058102,53058445,53058637,53058827,53060258,53060555,53061264,53061469,53061940,53062245,53062453,53062697,53063257,53063417,53063592,53064369	Gene ID= ENSG00000111077.17 TPM= 22.31 Transcript Type= protein_coding
chr12	53064316	53079420	53064316	53079420	-	ENST00000301463.8@SPRYD3	ENST00000301463.8	protein_coding	53079311,53077115,53075736,53075095,53074649,53073286,53068155,53067648,53066573,53066314,53064316	53079420,53077261,53075811,53075219,53074784,53073471,53068304,53067705,53066692,53066486,53065966	Gene ID= ENSG00000167778.8 TPM= 41.42 Transcript Type= protein_coding
chr12	53097445	53102340	53097445	53102340	+	ENST00000301464.3@IGFBP6	ENST00000301464.3	protein_coding	53097445,53100712,53101041,53102045	53098051,53100857,53101160,53102340	Gene ID= ENSG00000167779.7 TPM= 39.83 Transcript Type= protein_coding
chr12	53098106	53102340	53098106	53102340	+	transcript2223.chr12.nnic@IGFBP6	transcript2223.chr12.nnic	protein_coding	53098106,53100712,53101041,53102045	53098321,53100857,53101160,53102340	Gene ID= ENSG00000167779.7 TPM= 4.78 Transcript Type= NA
chr12	53157690	53180596	53157690	53180596	-	ENST00000379850.7@CSAD	ENST00000379850.7	protein_coding	53180567,53173728,53173345,53172522,53172346,53171882,53171326,53170423,53170072,53161273,53161127,53160763,53160120,53159887,53159623,53157690	53180596,53173767,53173476,53172648,53172436,53171988,53171441,53170502,53170126,53161389,53161191,53160844,53160319,53159938,53159712,53158684	Gene ID= ENSG00000139631.18 TPM= 1.06 Transcript Type= protein_coding
chr12	53210570	53218205	53210570	53218205	-	transcript2242.chr12.nic@RARG	transcript2242.chr12.nic	protein_coding	53215646,53215293,53214446,53214059,53213496,53213085,53210570	53218205,53215434,53214606,53214235,53213700,53213243,53211863	Gene ID= ENSG00000172819.16 TPM= 2.66 Transcript Type= NA
chr12	53210570	53214874	53210570	53214874	-	transcript2244.chr12.nic@RARG	transcript2244.chr12.nic	protein_coding	53214446,53214059,53213496,53213085,53210570	53214874,53214235,53213700,53213243,53211863	Gene ID= ENSG00000172819.16 TPM= 12.21 Transcript Type= NA
chr12	53210570	53214874	53210570	53214874	-	transcript2245.chr12.nnic@RARG	transcript2245.chr12.nnic	protein_coding	53214446,53214059,53213085,53210570	53214874,53214235,53213243,53211863	Gene ID= ENSG00000172819.16 TPM= 4.25 Transcript Type= NA
chr12	53252096	53254404	53252096	53254404	+	ENST00000329548.4@MFSD5	ENST00000329548.4	protein_coding	53252096,53252818	53252268,53254404	Gene ID= ENSG00000182544.8 TPM= 28.68 Transcript Type= protein_coding
chr12	53295291	53299450	53295291	53299450	+	ENST00000551018.5@PFDN5	ENST00000551018.5	protein_coding	53295291,53295839,53296244,53297850,53298045,53299269	53295639,53295941,53296275,53297924,53298150,53299450	Gene ID= ENSG00000123349.13 TPM= 243.15 Transcript Type= protein_coding
chr12	53295447	53299447	53295447	53299447	+	transcript2258.chr12.nic@PFDN5	transcript2258.chr12.nic	protein_coding	53295447,53295839,53297850,53298045,53299269	53295639,53296275,53297924,53298150,53299447	Gene ID= ENSG00000123349.13 TPM= 11.33 Transcript Type= NA
chr12	53295542	53299450	53295542	53299450	+	ENST00000547130.5@PFDN5	ENST00000547130.5	protein_coding	53295542,53296454,53297850,53298045,53299269	53295639,53296551,53297924,53298150,53299450	Gene ID= ENSG00000123349.13 TPM= 4.16 Transcript Type= nonsense_mediated_decay
chr12	53295525	53299445	53295525	53299445	+	ENST00000550880.5@PFDN5	ENST00000550880.5	protein_coding	53295525,53296430,53297850,53298045,53299269	53295639,53296551,53297924,53298150,53299445	Gene ID= ENSG00000123349.13 TPM= 1.24 Transcript Type= nonsense_mediated_decay
chr12	53295525	53299450	53295525	53299450	+	ENST00000351500.7@PFDN5	ENST00000351500.7	protein_coding	53295525,53297850,53298045,53299269	53295639,53297924,53298150,53299450	Gene ID= ENSG00000123349.13 TPM= 22.22 Transcript Type= protein_coding
chr12	53295536	53299450	53295536	53299450	+	ENST00000550846.5@PFDN5	ENST00000550846.5	protein_coding	53295536,53298045,53299269	53295639,53298150,53299450	Gene ID= ENSG00000123349.13 TPM= 10.09 Transcript Type= protein_coding
chr12	53295542	53299450	53295542	53299450	+	ENST00000243040.10@PFDN5	ENST00000243040.10	protein_coding	53295542,53295839,53297850,53298045,53299269	53295639,53295941,53297924,53298150,53299450	Gene ID= ENSG00000123349.13 TPM= 3.1 Transcript Type= nonsense_mediated_decay
chr12	53299686	53307158	53299686	53307158	+	ENST00000267103.9@C12orf10	ENST00000267103.9	protein_coding	53299686,53300150,53303034,53305908,53306198,53306680,53306966	53299953,53300262,53303193,53306060,53306320,53306861,53307158	Gene ID= ENSG00000139637.13 TPM= 40.36 Transcript Type= protein_coding
chr12	53307460	53321306	53307460	53321306	-	transcript2270.chr12.nic@AAAS	transcript2270.chr12.nic	protein_coding	53321201,53320565,53315727,53315335,53315094,53314751,53314298,53309601,53309157,53308960,53308725,53308435,53308282,53308052,53307845,53307460	53321306,53320692,53315782,53315426,53315140,53314849,53314441,53309721,53309281,53309020,53308815,53308528,53308349,53308133,53307929,53307713	Gene ID= ENSG00000094914.12 TPM= 4.78 Transcript Type= NA
chr12	53307456	53321631	53307456	53321631	-	ENST00000209873.8@AAAS	ENST00000209873.8	protein_coding	53321343,53320565,53315727,53315335,53315094,53314751,53314298,53309601,53309157,53308960,53308725,53308435,53308282,53308052,53307845,53307456	53321631,53320692,53315782,53315426,53315140,53314849,53314441,53309721,53309281,53309020,53308815,53308528,53308349,53308133,53307929,53307713	Gene ID= ENSG00000094914.12 TPM= 17.53 Transcript Type= protein_coding
chr12	53307460	53321609	53307460	53321609	-	transcript2272.chr12.nic@AAAS	transcript2272.chr12.nic	protein_coding	53321471,53320565,53315727,53315335,53315094,53314751,53314298,53309601,53309157,53308960,53308725,53308435,53308282,53308052,53307845,53307460	53321609,53320692,53315782,53315426,53315140,53314849,53314441,53309721,53309281,53309020,53308815,53308528,53308349,53308133,53307929,53307713	Gene ID= ENSG00000094914.12 TPM= 5.84 Transcript Type= NA
chr12	53307460	53321306	53307460	53321306	-	transcript2274.chr12.nic@AAAS	transcript2274.chr12.nic	protein_coding	53320565,53315727,53315335,53315094,53314751,53314298,53309601,53309157,53308960,53308725,53308435,53308282,53308052,53307845,53307460	53321306,53315782,53315426,53315140,53314849,53314441,53309721,53309281,53309020,53308815,53308528,53308349,53308133,53307929,53307713	Gene ID= ENSG00000094914.12 TPM= 14.34 Transcript Type= NA
chr12	53380947	53414013	53380947	53414013	+	transcript2279.chr12.nnic@SP1	transcript2279.chr12.nnic	protein_coding	53380947,53382107,53406585,53409362,53410923	53381813,53383622,53406753,53409561,53414013	Gene ID= ENSG00000185591.9 TPM= 5.31 Transcript Type= NA
chr12	53441605	53446633	53441605	53446633	+	ENST00000429243.6@PRR13	ENST00000429243.6	protein_coding	53441605,53442695,53443391,53446015	53441792,53442733,53443773,53446633	Gene ID= ENSG00000205352.10 TPM= 56.29 Transcript Type= protein_coding
chr12	53441748	53446645	53441748	53446645	+	ENST00000546581.5@PRR13	ENST00000546581.5	protein_coding	53441748,53442695,53443679,53446015	53441792,53442733,53443773,53446645	Gene ID= ENSG00000205352.10 TPM= 2.66 Transcript Type= protein_coding
chr12	53441709	53446635	53441709	53446635	+	transcript2284.chr12.nnic@AC023509.1	transcript2284.chr12.nnic	processed_transcript	53441709,53442695,53446015	53441792,53442733,53446635	Gene ID= ENSG00000257379.1 TPM= 3.72 Transcript Type= NA
chr12	53452129	53479832	53452129	53479832	+	ENST00000359462.9@PCBP2	ENST00000359462.9	protein_coding	53452129,53454726,53455347,53455461,53455885,53459272,53461015,53462481,53464760,53465932,53467221,53467805,53468777,53471638,53479406	53452376,53454869,53455370,53455493,53456001,53459403,53461143,53462567,53464852,53465973,53467293,53467843,53468832,53471807,53479832	Gene ID= ENSG00000197111.15 TPM= 18.16 Transcript Type= protein_coding
chr12	53452117	53479821	53452117	53479821	+	transcript2293.chr12.nic@PCBP2	transcript2293.chr12.nic	protein_coding	53452117,53454726,53455347,53455461,53455885,53459272,53461015,53462481,53464760,53465932,53467221,53468777,53471638,53479406	53452376,53454869,53455370,53455493,53456001,53459403,53461143,53462567,53464852,53465973,53467293,53468832,53471807,53479821	Gene ID= ENSG00000197111.15 TPM= 13.59 Transcript Type= NA
chr12	53452102	53481161	53452102	53481161	+	ENST00000447282.5@PCBP2	ENST00000447282.5	protein_coding	53452102,53454726,53455347,53455461,53455885,53459272,53461015,53462481,53465932,53467221,53467805,53468777,53471638,53479406	53452376,53454869,53455370,53455493,53456001,53459403,53461143,53462567,53465973,53467293,53467843,53468832,53471807,53481161	Gene ID= ENSG00000197111.15 TPM= 7.66 Transcript Type= protein_coding
chr12	53452102	53479826	53452102	53479826	+	ENST00000359282.9@PCBP2	ENST00000359282.9	protein_coding	53452102,53454726,53455347,53455461,53455885,53459272,53461015,53462493,53465932,53467221,53467805,53468777,53471638,53479406	53452376,53454869,53455370,53455493,53456001,53459403,53461143,53462567,53465973,53467293,53467843,53468832,53471807,53479826	Gene ID= ENSG00000197111.15 TPM= 8.72 Transcript Type= protein_coding
chr12	53452102	53481161	53452102	53481161	+	ENST00000437231.5@PCBP2	ENST00000437231.5	protein_coding	53452102,53454726,53455347,53455461,53455885,53459272,53461015,53462493,53465932,53467221,53468777,53471638,53479406	53452376,53454869,53455370,53455493,53456001,53459403,53461143,53462567,53465973,53467293,53468832,53471807,53481161	Gene ID= ENSG00000197111.15 TPM= 5.53 Transcript Type= protein_coding
chr12	53452117	53479821	53452117	53479821	+	transcript2311.chr12.nic@PCBP2	transcript2311.chr12.nic	protein_coding	53452117,53454726,53455347,53455461,53455885,53459272,53461015,53462493,53467221,53467805,53468777,53471638,53479406	53452376,53454869,53455370,53455493,53456001,53459403,53461143,53462567,53467293,53467843,53468832,53471807,53479821	Gene ID= ENSG00000197111.15 TPM= 22.79 Transcript Type= NA
chr12	53452368	53479614	53452368	53479614	+	ENST00000552296.6@PCBP2	ENST00000552296.6	protein_coding	53452368,53454726,53455347,53455461,53455885,53459272,53461015,53462493,53464760,53465932,53467221,53467805,53468780,53471638,53479406	53452376,53454869,53455370,53455493,53456001,53459403,53461143,53462567,53464852,53465973,53467293,53467843,53468832,53471807,53479614	Gene ID= ENSG00000197111.15 TPM= 3.19 Transcript Type= protein_coding
chr12	53468468	53479624	53468468	53479624	+	ENST00000550733.1@PCBP2	ENST00000550733.1	protein_coding	53468468,53471638,53479406	53468832,53471807,53479624	Gene ID= ENSG00000197111.15 TPM= 8.5 Transcript Type= retained_intron
chr12	53473765	53477356	53473765	53477356	-	transcript2319.chr12.nnic@NA	transcript2319.chr12.nnic	NA	53473765	53477356	Gene ID= novel_gene_chr12_2320 TPM= 6.37 Transcript Type= NA
chr12	53481178	53489101	53481178	53489101	-	transcript2314.chr12.nnic@MAP3K12	transcript2314.chr12.nnic	protein_coding	53486947,53486439,53486056,53485317,53485056,53484255,53483911,53483601,53483349,53482565,53482299,53481941,53481178	53489101,53486624,53486247,53485478,53485214,53484368,53484020,53483725,53483484,53483189,53482371,53482211,53481282	Gene ID= ENSG00000139625.12 TPM= 5.31 Transcript Type= NA
chr12	53479673	53485503	53479673	53485503	-	transcript2321.chr12.nnic@NA	transcript2321.chr12.nnic	NA	53479673	53485503	Gene ID= novel_gene_chr12_2322 TPM= 16.99 Transcript Type= NA
chr12	53500153	53501562	53500153	53501562	-	transcript2332.chr12.nnic@NA	transcript2332.chr12.nnic	NA	53500153	53501562	Gene ID= novel_gene_chr12_2333 TPM= 5.31 Transcript Type= NA
chr12	53500926	53506431	53500926	53506431	+	ENST00000266987.6@TARBP2	ENST00000266987.6	protein_coding	53500926,53502015,53503027,53503713,53504397,53504698,53505135,53505649,53505991	53501461,53502184,53503129,53503808,53504469,53504815,53505262,53505850,53506431	Gene ID= ENSG00000139546.10 TPM= 8.5 Transcript Type= protein_coding
chr12	53501283	53506431	53501283	53506431	+	transcript2325.chr12.nnic@TARBP2	transcript2325.chr12.nnic	protein_coding	53501283,53502015,53503713,53504397,53504698,53505135,53505649,53505991	53501461,53502184,53503808,53504469,53504815,53505262,53505850,53506431	Gene ID= ENSG00000139546.10 TPM= 2.12 Transcript Type= NA
chr12	53500921	53506431	53500921	53506431	+	ENST00000550147.5@TARBP2	ENST00000550147.5	protein_coding	53500921,53502015,53503027,53503730,53504397,53504698,53505135,53505649,53505991	53501461,53502184,53503129,53503808,53504469,53504815,53505262,53505850,53506431	Gene ID= ENSG00000139546.10 TPM= 1.06 Transcript Type= nonsense_mediated_decay
chr12	53512059	53626407	53512059	53626407	-	ENST00000420353.6@ATF7	ENST00000420353.6	protein_coding	53626279,53600953,53552541,53543330,53537415,53534502,53533160,53532510,53531744,53524564,53523276,53512059	53626407,53601021,53552637,53543448,53537552,53534659,53533259,53532623,53531896,53524761,53523384,53517354	Gene ID= ENSG00000170653.18 TPM= 18.06 Transcript Type= protein_coding
chr12	53542887	53626410	53542887	53626410	-	ENST00000591397.1@ATF7	ENST00000591397.1	protein_coding	53626279,53600953,53552541,53542887	53626410,53601021,53552637,53543448	Gene ID= ENSG00000170653.18 TPM= 18.06 Transcript Type= protein_coding
chr12	53665171	53676114	53665171	53676114	-	transcript2341.chr12.nnic@ATP5G2	transcript2341.chr12.nnic	protein_coding	53676053,53672576,53669871,53669148,53665171	53676114,53672645,53669879,53669341,53665428	Gene ID= ENSG00000135390.17 TPM= 33.99 Transcript Type= NA
chr12	53708517	53727745	53708517	53727745	-	ENST00000262059.8@CALCOCO1	ENST00000262059.8	protein_coding	53727404,53725087,53724645,53723593,53722025,53721467,53719739,53716260,53715793,53715200,53714598,53714133,53713701,53713100,53708517	53727745,53725266,53724747,53723783,53722183,53721615,53719829,53716415,53716047,53715325,53714693,53714241,53713900,53713203,53712121	Gene ID= ENSG00000012822.15 TPM= 8.5 Transcript Type= protein_coding
chr12	53711284	53727492	53711284	53727492	-	transcript2352.chr12.nic@CALCOCO1	transcript2352.chr12.nic	protein_coding	53727404,53725087,53724645,53723593,53722025,53721467,53719739,53716260,53715793,53715200,53714598,53713701,53711284	53727492,53725266,53724747,53723783,53722183,53721615,53719829,53716415,53716047,53715325,53714693,53714241,53713206	Gene ID= ENSG00000012822.15 TPM= 6.37 Transcript Type= NA
chr12	53746338	53751981	53746338	53751981	-	transcript2356.chr12.nnic@CISTR	transcript2356.chr12.nnic	lincRNA	53751774,53750317,53746338	53751981,53750965,53746848	Gene ID= ENSG00000260492.2 TPM= 3.19 Transcript Type= NA
chr12	54126098	54132843	54126098	54132843	+	ENST00000508564.1@LINC02381	ENST00000508564.1	lincRNA	54126098,54131990	54126612,54132843	Gene ID= ENSG00000250742.2 TPM= 6.37 Transcript Type= lincRNA
chr12	54180358	54188957	54180358	54188957	-	ENST00000513838.5@SMUG1	ENST00000513838.5	protein_coding	54188726,54188511,54187819,54183656,54182504,54180358	54188957,54188596,54187905,54183959,54182623,54181647	Gene ID= ENSG00000123415.15 TPM= 1.06 Transcript Type= protein_coding
chr12	54181471	54188989	54181471	54188989	-	transcript2361.chr12.nic@SMUG1	transcript2361.chr12.nic	protein_coding	54188951,54187819,54183656,54182504,54181471	54188989,54187905,54183959,54182623,54181647	Gene ID= ENSG00000123415.15 TPM= 3.19 Transcript Type= NA
chr12	54181275	54188994	54181275	54188994	-	ENST00000508394.6@SMUG1	ENST00000508394.6	protein_coding	54188951,54183656,54181275	54188994,54183959,54182623	Gene ID= ENSG00000123415.15 TPM= 4.25 Transcript Type= protein_coding
chr12	54181471	54188976	54181471	54188976	-	ENST00000243112.9@SMUG1	ENST00000243112.9	protein_coding	54188951,54183656,54182504,54181471	54188976,54183959,54182623,54181647	Gene ID= ENSG00000123415.15 TPM= 2.12 Transcript Type= protein_coding
chr12	54181468	54188974	54181468	54188974	-	ENST00000337581.7@SMUG1	ENST00000337581.7	protein_coding	54188951,54187819,54183656,54181468	54188974,54187905,54183959,54182623	Gene ID= ENSG00000123415.15 TPM= 6.37 Transcript Type= protein_coding
chr12	54230940	54280102	54230940	54280102	-	ENST00000209875.8@CBX5	ENST00000209875.8	protein_coding	54280008,54257514,54252041,54246115,54230940	54280102,54257692,54252227,54246215,54241905	Gene ID= ENSG00000094916.15 TPM= 197.56 Transcript Type= protein_coding
chr12	54278623	54280122	54278623	54280122	-	transcript2397.chr12.nnic@NA	transcript2397.chr12.nnic	NA	54278623	54280122	Gene ID= novel_gene_chr12_2398 TPM= 3.19 Transcript Type= NA
chr12	54280193	54287087	54280193	54287087	+	ENST00000546500.5@HNRNPA1	ENST00000546500.5	protein_coding	54280193,54281386,54281795,54282090,54282394,54282573,54282800,54283812,54284258,54284549	54280822,54281502,54281941,54282300,54282486,54282665,54282874,54283967,54284317,54287087	Gene ID= ENSG00000135486.17 TPM= 219.07 Transcript Type= protein_coding
chr12	54280755	54285214	54280755	54285214	+	ENST00000340913.10@HNRNPA1	ENST00000340913.10	protein_coding	54280755,54281386,54281795,54282090,54282394,54282573,54282800,54283079,54283812,54284258,54284549	54280822,54281502,54281941,54282300,54282486,54282665,54282874,54283234,54283967,54284317,54285214	Gene ID= ENSG00000135486.17 TPM= 71.43 Transcript Type= protein_coding
chr12	54280748	54287088	54280748	54287088	+	ENST00000547566.5@HNRNPA1	ENST00000547566.5	protein_coding	54280748,54281386,54281795,54282090,54282394,54282573,54282800,54283812,54284258,54286662,54286953	54280822,54281502,54281941,54282300,54282486,54282665,54282874,54283967,54284317,54286732,54287088	Gene ID= ENSG00000135486.17 TPM= 6.64 Transcript Type= nonsense_mediated_decay
chr12	54325127	54351849	54325127	54351849	+	ENST00000262061.6@COPZ1	ENST00000262061.6	protein_coding	54325127,54340547,54342206,54343225,54345460,54347767,54348000,54349620,54350476	54325181,54340615,54342287,54343316,54345515,54347844,54348051,54349658,54351849	Gene ID= ENSG00000111481.9 TPM= 75.41 Transcript Type= protein_coding
chr12	54369133	54385767	54369133	54385767	-	ENST00000551109.5@ZNF385A	ENST00000551109.5	protein_coding	54385673,54384428,54375844,54373973,54371473,54370927,54370626,54369133	54385767,54384564,54375954,54374135,54371715,54371096,54370721,54370486	Gene ID= ENSG00000161642.17 TPM= 9.56 Transcript Type= protein_coding
chr12	54580259	54588609	54580259	54588609	-	transcript2414.chr12.nic@PPP1R1A	transcript2414.chr12.nic	protein_coding	54588405,54584260,54583211,54581976,54580944,54580259	54588609,54584320,54583248,54582131,54581050,54580392	Gene ID= ENSG00000135447.16 TPM= 2.12 Transcript Type= NA
chr12	54580259	54588687	54580259	54588687	-	transcript2415.chr12.nic@PPP1R1A	transcript2415.chr12.nic	protein_coding	54588405,54584260,54583211,54582732,54580944,54580259	54588687,54584320,54583248,54582795,54581050,54580392	Gene ID= ENSG00000135447.16 TPM= 3.19 Transcript Type= NA
chr12	54580259	54588687	54580259	54588687	-	transcript2417.chr12.nic@PPP1R1A	transcript2417.chr12.nic	protein_coding	54588405,54584260,54583211,54580944,54580259	54588687,54584320,54583248,54581050,54580392	Gene ID= ENSG00000135447.16 TPM= 4.25 Transcript Type= NA
chr12	54579248	54588659	54579248	54588659	-	ENST00000257905.12@PPP1R1A	ENST00000257905.12	protein_coding	54588405,54584260,54583211,54582732,54581976,54580944,54579248	54588659,54584320,54583248,54582795,54582131,54581050,54580392	Gene ID= ENSG00000135447.16 TPM= 16.99 Transcript Type= protein_coding
chr12	55681546	55684611	55681546	55684611	+	ENST00000394252.3@METTL7B	ENST00000394252.3	protein_coding	55681546,55683813	55682252,55684611	Gene ID= ENSG00000170439.6 TPM= 10.62 Transcript Type= protein_coding
chr12	55684568	55707858	55684568	55707858	-	transcript2448.chr12.nnic@ITGA7	transcript2448.chr12.nnic	protein_coding	55707477,55703051,55702872,55700899,55699870,55698710,55698383,55697938,55697695,55697451,55697216,55696899,55696283,55695554,55694615,55694443,55694256,55694021,55693141,55692844,55688844,55688202,55687971,55684568	55707858,55703178,55702951,55701154,55699989,55698917,55698576,55698026,55697822,55697546,55697277,55697068,55696432,55695637,55694695,55694522,55694330,55694123,55693317,55692975,55688957,55688300,55688096,55685288	Gene ID= ENSG00000135424.15 TPM= 80.99 Transcript Type= NA
chr12	55684568	55707898	55684568	55707898	-	ENST00000257879.10@ITGA7	ENST00000257879.10	protein_coding	55707477,55703051,55702872,55700899,55699870,55698710,55698383,55697938,55697695,55697451,55697216,55696899,55696283,55695522,55694778,55694615,55694443,55694256,55694021,55693141,55692844,55688844,55688202,55687971,55684568	55707898,55703178,55702951,55701154,55699989,55698917,55698576,55698026,55697822,55697546,55697277,55697068,55696432,55695637,55694970,55694695,55694522,55694330,55694123,55693317,55692975,55688957,55688300,55688096,55685288	Gene ID= ENSG00000135424.15 TPM= 179.76 Transcript Type= protein_coding
chr12	55684568	55707701	55684568	55707701	-	ENST00000553804.5@ITGA7	ENST00000553804.5	protein_coding	55707477,55703051,55702872,55700899,55700262,55698710,55698383,55697938,55697695,55697451,55697216,55696899,55696283,55695522,55694778,55694615,55694443,55694256,55694021,55693141,55692844,55688844,55688202,55687971,55684568	55707701,55703178,55702951,55701154,55700393,55698917,55698576,55698026,55697822,55697546,55697277,55697068,55696432,55695637,55694970,55694695,55694522,55694330,55694123,55693317,55692975,55688957,55688300,55688096,55685288	Gene ID= ENSG00000135424.15 TPM= 126.12 Transcript Type= protein_coding
chr12	55709951	55719703	55709951	55719703	+	transcript2465.chr12.nnic@BLOC1S1	transcript2465.chr12.nnic	protein_coding	55709951,55715990,55716933,55719091,55719499	55710402,55716196,55717005,55719223,55719703	Gene ID= ENSG00000135441.7 TPM= 14.52 Transcript Type= NA
chr12	55709948	55719703	55709948	55719703	+	transcript2474.chr12.nnic@BLOC1S1	transcript2474.chr12.nnic	protein_coding	55709948,55719091,55719499	55710402,55719223,55719703	Gene ID= ENSG00000135441.7 TPM= 4.96 Transcript Type= NA
chr12	55716037	55719703	55716037	55719703	+	ENST00000548925.5@BLOC1S1	ENST00000548925.5	protein_coding	55716037,55716933,55719091,55719499	55716196,55717005,55719223,55719703	Gene ID= ENSG00000135441.7 TPM= 48.51 Transcript Type= protein_coding
chr12	55716081	55719670	55716081	55719670	+	ENST00000553100.1@BLOC1S1	ENST00000553100.1	protein_coding	55716081,55719091,55719499	55716196,55719223,55719670	Gene ID= ENSG00000135441.7 TPM= 1.06 Transcript Type= nonsense_mediated_decay
chr12	55709951	55720906	55709951	55720906	+	transcript2471.chr12.nnic@AC009779.3	transcript2471.chr12.nnic	protein_coding	55709951,55715990,55716933,55719091	55710402,55716196,55717005,55720906	Gene ID= ENSG00000258311.5 TPM= 4.25 Transcript Type= NA
chr12	55720398	55724705	55720398	55724705	+	ENST00000257895.9@RDH5	ENST00000257895.9	protein_coding	55720398,55721153,55721689,55723886,55724322	55720517,55721494,55721947,55724049,55724705	Gene ID= ENSG00000135437.9 TPM= 9.56 Transcript Type= protein_coding
chr12	55725487	55729220	55725487	55729220	-	ENST00000257857.8@CD63	ENST00000257857.8	protein_coding	55728953,55728276,55727151,55726890,55726700,55726121,55725813,55725487	55729220,55728352,55727339,55726964,55726795,55726261,55725896,55725626	Gene ID= ENSG00000135404.11 TPM= 306.08 Transcript Type= protein_coding
chr12	55725443	55728650	55725443	55728650	-	ENST00000420846.7@CD63	ENST00000420846.7	protein_coding	55728516,55728276,55727151,55726890,55726700,55726121,55725813,55725443	55728650,55728352,55727339,55726964,55726795,55726261,55725896,55725626	Gene ID= ENSG00000135404.11 TPM= 33.05 Transcript Type= protein_coding
chr12	55725482	55729707	55725482	55729707	-	ENST00000549117.5@CD63	ENST00000549117.5	protein_coding	55729282,55728276,55727151,55726890,55726700,55726121,55725813,55725482	55729707,55728352,55727339,55726964,55726795,55726261,55725896,55725626	Gene ID= ENSG00000135404.11 TPM= 4.99 Transcript Type= protein_coding
chr12	55725470	55728482	55725470	55728482	-	ENST00000552692.5@CD63	ENST00000552692.5	protein_coding	55728276,55727151,55726890,55726700,55726121,55725813,55725470	55728482,55727339,55726964,55726795,55726261,55725896,55725626	Gene ID= ENSG00000135404.11 TPM= 24.56 Transcript Type= protein_coding
chr12	55729104	55730852	55729104	55730852	+	ENST00000552576.2@AC009779.2	ENST00000552576.2	antisense_RNA	55729104,55729662	55729355,55730852	Gene ID= ENSG00000258056.2 TPM= 16.99 Transcript Type= antisense_RNA
chr12	55743399	55757127	55743399	55757127	+	ENST00000546799.1@GDF11	ENST00000546799.1	protein_coding	55743399,55748586,55749502,55757013	55743761,55748983,55749883,55757127	Gene ID= ENSG00000135414.9 TPM= 1.06 Transcript Type= protein_coding
chr12	55743280	55757278	55743280	55757278	+	ENST00000257868.9@GDF11	ENST00000257868.9	protein_coding	55743280,55748586,55749502	55743761,55748983,55757278	Gene ID= ENSG00000135414.9 TPM= 2.12 Transcript Type= protein_coding
chr12	55757274	55817756	55757274	55817756	-	ENST00000336133.7@SARNP	ENST00000336133.7	protein_coding	55817666,55803629,55800854,55800562,55796025,55794807,55794359,55790567,55789075,55760551,55757274	55817756,55803728,55800900,55800629,55796076,55794880,55794387,55790592,55789143,55760640,55757553	Gene ID= ENSG00000205323.8 TPM= 59.48 Transcript Type= protein_coding
chr12	55817919	55821879	55817919	55821879	+	ENST00000243045.9@ORMDL2	ENST00000243045.9	protein_coding	55817919,55818999,55819342,55820260	55818112,55819173,55819493,55821879	Gene ID= ENSG00000123353.9 TPM= 10.62 Transcript Type= protein_coding
chr12	55818044	55820476	55818044	55820476	+	ENST00000550836.1@ORMDL2	ENST00000550836.1	protein_coding	55818044,55819342,55820260	55818112,55819493,55820476	Gene ID= ENSG00000123353.9 TPM= 1.06 Transcript Type= protein_coding
chr12	55820960	55829603	55820960	55829603	-	transcript2521.chr12.nic@DNAJC14	transcript2521.chr12.nic	protein_coding	55829141,55827252,55823402,55823070,55822572,55822373,55820960	55829603,55828714,55823508,55823189,55822732,55822475,55822187	Gene ID= ENSG00000135392.15 TPM= 13.81 Transcript Type= NA
chr12	55820960	55830781	55820960	55830781	-	ENST00000357606.7@DNAJC14	ENST00000357606.7	protein_coding	55830696,55829489,55827252,55823402,55823070,55822572,55822373,55820960	55830781,55829636,55828714,55823508,55823189,55822732,55822475,55822187	Gene ID= ENSG00000135392.15 TPM= 24.43 Transcript Type= protein_coding
chr12	55832847	55836246	55832847	55836246	+	ENST00000487582.1@TMEM198B	ENST00000487582.1	transcribed_unitary_pseudogene	55832847,55834851,55836126	55833541,55835615,55836246	Gene ID= ENSG00000182796.13 TPM= 3.19 Transcript Type= processed_transcript
chr12	55836426	55842922	55836426	55842922	-	ENST00000322569.8@MMP19	ENST00000322569.8	protein_coding	55842744,55842353,55841106,55840667,55839496,55838606,55837843,55837555,55836426	55842922,55842438,55841236,55840882,55839741,55838734,55838007,55837682,55837374	Gene ID= ENSG00000123342.15 TPM= 2.12 Transcript Type= protein_coding
chr12	55901413	55927913	55901413	55927913	-	ENST00000408946.6@PYM1	ENST00000408946.6	protein_coding	55927725,55903387,55901413	55927913,55903480,55902355	Gene ID= ENSG00000170473.16 TPM= 9.56 Transcript Type= protein_coding
chr12	55901414	55927112	55901414	55927112	-	ENST00000398213.4@PYM1	ENST00000398213.4	protein_coding	55927076,55903387,55901414	55927112,55903480,55902355	Gene ID= ENSG00000170473.16 TPM= 4.25 Transcript Type= protein_coding
chr12	55966769	55972784	55966769	55972784	+	ENST00000266970.8@CDK2	ENST00000266970.8	protein_coding	55966769,55967857,55968049,55968778,55969475,55971044,55971521	55967124,55967934,55968169,55968948,55969576,55971247,55972784	Gene ID= ENSG00000123374.10 TPM= 15.93 Transcript Type= protein_coding
chr12	55974011	55996683	55974011	55996683	+	ENST00000360299.9@RAB5B	ENST00000360299.9	protein_coding	55974011,55986869,55989947,55990682,55991360,55992097	55974139,55987123,55990098,55990804,55991453,55996683	Gene ID= ENSG00000111540.15 TPM= 12.75 Transcript Type= protein_coding
chr12	55974122	55994706	55974122	55994706	+	transcript2541.chr12.nnic@RAB5B	transcript2541.chr12.nnic	protein_coding	55974122,55986869,55989947,55990682,55991360,55992097	55974339,55987123,55990098,55990804,55991453,55994706	Gene ID= ENSG00000111540.15 TPM= 45.67 Transcript Type= NA
chr12	55997180	56005525	55997180	56005525	+	ENST00000356124.8@SUOX	ENST00000356124.8	protein_coding	55997180,56002212,56002543,56003618	55997339,56002271,56002720,56005525	Gene ID= ENSG00000139531.12 TPM= 21.77 Transcript Type= protein_coding
chr12	55997231	56005525	55997231	56005525	+	ENST00000266971.7@SUOX	ENST00000266971.7	protein_coding	55997231,55997615,56002212,56002543,56003618	55997339,55997723,56002271,56002720,56005525	Gene ID= ENSG00000139531.12 TPM= 20.71 Transcript Type= protein_coding
chr12	55997288	56005486	55997288	56005486	+	ENST00000394115.6@SUOX	ENST00000394115.6	protein_coding	55997288,55997615,55999333,56002212,56002543,56003618	55997339,55997723,55999458,56002271,56002720,56005486	Gene ID= ENSG00000139531.12 TPM= 3.19 Transcript Type= protein_coding
chr12	55998805	56000394	55998805	56000394	-	transcript2550.chr12.nnic@NA	transcript2550.chr12.nnic	NA	55998805	56000394	Gene ID= novel_gene_chr12_2551 TPM= 2.12 Transcript Type= NA
chr12	56041853	56044675	56041853	56044675	+	ENST00000356464.9@RPS26	ENST00000356464.9	protein_coding	56041853,56042425,56043363,56044119	56042169,56042602,56043493,56044675	Gene ID= ENSG00000197728.9 TPM= 6.37 Transcript Type= protein_coding
chr12	56104319	56113861	56104319	56113861	+	ENST00000303305.10@PA2G4	ENST00000303305.10	protein_coding	56104319,56106588,56106990,56107187,56107521,56109230,56109857,56110399,56110559,56110964,56111182,56111476,56112823	56104825,56106716,56107095,56107256,56107613,56109293,56109935,56110477,56110692,56111058,56111309,56111529,56113861	Gene ID= ENSG00000170515.13 TPM= 84.97 Transcript Type= protein_coding
chr12	56116586	56117943	56116586	56117943	+	ENST00000546591.5@RPL41	ENST00000546591.5	protein_coding	56116586,56117189,56117482	56116799,56117211,56117943	Gene ID= ENSG00000229117.8 TPM= 102.5 Transcript Type= protein_coding
chr12	56116590	56117832	56116590	56117832	+	ENST00000501597.3@RPL41	ENST00000501597.3	protein_coding	56116590,56116775,56117189,56117482	56116659,56116799,56117211,56117832	Gene ID= ENSG00000229117.8 TPM= 974.53 Transcript Type= protein_coding
chr12	56118159	56127514	56118159	56127514	+	ENST00000257940.6@ZC3H10	ENST00000257940.6	protein_coding	56118159,56119088,56120511	56118318,56119151,56127514	Gene ID= ENSG00000135482.6 TPM= 11.68 Transcript Type= protein_coding
chr12	56128056	56144671	56128056	56144671	+	ENST00000394048.9@ESYT1	ENST00000394048.9	protein_coding	56128056,56130582,56130791,56131040,56131244,56131477,56131749,56132209,56132421,56132719,56133417,56133588,56133781,56134110,56134342,56136744,56137218,56137499,56137832,56138026,56138183,56138404,56138768,56138927,56142285,56142578,56142835,56143017,56143228,56143580,56143823	56128709,56130623,56130925,56131113,56131316,56131566,56131804,56132332,56132597,56132801,56133465,56133674,56133873,56134181,56134428,56136893,56137373,56137675,56137914,56138074,56138272,56138499,56138839,56139013,56142425,56142732,56142933,56143148,56143333,56143629,56144671	Gene ID= ENSG00000139641.12 TPM= 38.24 Transcript Type= protein_coding
chr12	56152568	56157976	56152568	56157976	+	transcript2600.chr12.nic@MYL6B	transcript2600.chr12.nic	protein_coding	56152568,56153873,56154813,56155055,56155419,56157468,56157698,56157882	56152631,56154092,56154840,56155198,56155592,56157545,56157735,56157976	Gene ID= ENSG00000196465.10 TPM= 18.06 Transcript Type= NA
chr12	56152439	56157976	56152439	56157976	+	ENST00000550443.5@MYL6B	ENST00000550443.5	protein_coding	56152439,56153809,56154813,56155055,56155419,56157468,56157698,56157882	56152631,56154092,56154840,56155198,56155592,56157545,56157735,56157976	Gene ID= ENSG00000196465.10 TPM= 3.19 Transcript Type= protein_coding
chr12	56158357	56161575	56158357	56161575	+	transcript2606.chr12.nnic@MYL6	transcript2606.chr12.nnic	protein_coding	56158357,56158684,56158902,56159587,56159975,56160243,56160626,56161387	56158404,56158711,56158920,56159730,56160148,56160320,56160670,56161575	Gene ID= ENSG00000092841.18 TPM= 260.34 Transcript Type= NA
chr12	56158298	56161575	56158298	56161575	+	transcript2611.chr12.nnic@MYL6	transcript2611.chr12.nnic	protein_coding	56158298,56158684,56158902,56159587,56159975,56160243,56161387	56158404,56158711,56158920,56159730,56160148,56160320,56161575	Gene ID= ENSG00000092841.18 TPM= 134.51 Transcript Type= NA
chr12	56158161	56161574	56158161	56161574	+	ENST00000550697.5@MYL6	ENST00000550697.5	protein_coding	56158161,56158684,56159587,56159975,56160243,56160626,56161387	56158404,56158711,56159730,56160148,56160320,56160670,56161574	Gene ID= ENSG00000092841.18 TPM= 238.76 Transcript Type= protein_coding
chr12	56158349	56161573	56158349	56161573	+	transcript2618.chr12.nnic@MYL6	transcript2618.chr12.nnic	protein_coding	56158349,56158684,56158902,56159587,56159975,56160243	56158404,56158711,56158920,56159730,56160148,56161573	Gene ID= ENSG00000092841.18 TPM= 105.33 Transcript Type= NA
chr12	56158359	56161573	56158359	56161573	+	transcript2633.chr12.nic@MYL6	transcript2633.chr12.nic	protein_coding	56158359,56158684,56159975,56160243	56158404,56159730,56160148,56161573	Gene ID= ENSG00000092841.18 TPM= 36.29 Transcript Type= NA
chr12	56158362	56161574	56158362	56161574	+	ENST00000547649.5@MYL6	ENST00000547649.5	protein_coding	56158362,56158684,56159587,56159975,56160243,56161387	56158404,56158711,56159730,56160148,56160320,56161574	Gene ID= ENSG00000092841.18 TPM= 204.61 Transcript Type= protein_coding
chr12	56158349	56161550	56158349	56161550	+	ENST00000550184.5@MYL6	ENST00000550184.5	protein_coding	56158349,56158684,56159975,56160243,56160626,56161387	56158404,56159730,56160148,56160320,56160670,56161550	Gene ID= ENSG00000092841.18 TPM= 8.5 Transcript Type= retained_intron
chr12	56158346	56161575	56158346	56161575	+	ENST00000548580.5@MYL6	ENST00000548580.5	protein_coding	56158346,56158684,56159975,56160243,56161387	56158404,56158711,56160148,56160320,56161575	Gene ID= ENSG00000092841.18 TPM= 47.41 Transcript Type= protein_coding
chr12	56158358	56161574	56158358	56161574	+	transcript2640.chr12.nnic@NA	transcript2640.chr12.nnic	NA	56158358	56161574	Gene ID= novel_gene_chr12_2641 TPM= 6.37 Transcript Type= NA
chr12	56162359	56189559	56162359	56189559	-	transcript2582.chr12.nic@SMARCC2	transcript2582.chr12.nic	protein_coding	56189351,56187187,56186155,56185030,56184844,56184175,56183861,56182004,56181704,56181482,56180977,56178997,56178810,56178404,56178022,56174651,56173696,56172585,56172428,56171679,56171271,56170144,56169776,56169529,56168060,56165318,56164648,56162359	56189559,56187306,56186240,56185111,56184936,56184244,56183930,56182079,56181835,56181597,56181101,56179056,56178847,56178534,56178093,56174764,56173849,56172704,56172490,56171937,56171432,56170208,56169911,56169695,56168194,56165699,56164731,56163765	Gene ID= ENSG00000139613.11 TPM= 24.43 Transcript Type= NA
chr12	56163330	56189548	56163330	56189548	-	ENST00000347471.8@SMARCC2	ENST00000347471.8	protein_coding	56189351,56187187,56186155,56185030,56184844,56184175,56183861,56182004,56181704,56181482,56180977,56178997,56178810,56178404,56178022,56174651,56173696,56172937,56172585,56172428,56171679,56171271,56170144,56169776,56169529,56168060,56165318,56164648,56163330	56189548,56187306,56186240,56185111,56184936,56184244,56183930,56182079,56181835,56181597,56181101,56179056,56178847,56178534,56178093,56174764,56173849,56173029,56172704,56172490,56171937,56171432,56170208,56169911,56169695,56168194,56165699,56164731,56163765	Gene ID= ENSG00000139613.11 TPM= 48.33 Transcript Type= protein_coding
chr12	56163328	56189476	56163328	56189476	-	ENST00000550164.5@SMARCC2	ENST00000550164.5	protein_coding	56189351,56187187,56186155,56185030,56184844,56184175,56183861,56182004,56181704,56181482,56180977,56178997,56178810,56178404,56178022,56174651,56173696,56172937,56172585,56172428,56171679,56171271,56170144,56169776,56169529,56168060,56165318,56164303,56163328	56189476,56187306,56186240,56185111,56184936,56184244,56183930,56182079,56181835,56181597,56181101,56179056,56178847,56178534,56178093,56174764,56173849,56173029,56172704,56172490,56171937,56171432,56170208,56169911,56169695,56168194,56165699,56164731,56163765	Gene ID= ENSG00000139613.11 TPM= 4.51 Transcript Type= protein_coding
chr12	56205450	56221969	56205450	56221969	-	transcript2645.chr12.nic@RNF41	transcript2645.chr12.nic	protein_coding	56221903,56216429,56213958,56212996,56210297,56208163,56207646,56205450	56221969,56216613,56214070,56213138,56210568,56208298,56207749,56206798	Gene ID= ENSG00000181852.17 TPM= 3.72 Transcript Type= NA
chr12	56205450	56221909	56205450	56221909	-	ENST00000394013.6@RNF41	ENST00000394013.6	protein_coding	56221760,56216429,56213958,56212996,56210297,56208163,56207646,56205450	56221909,56216613,56214070,56213138,56210568,56208298,56207749,56206798	Gene ID= ENSG00000181852.17 TPM= 4.78 Transcript Type= protein_coding
chr12	56224325	56229854	56224325	56229854	+	ENST00000267023.8@NABP2	ENST00000267023.8	protein_coding	56224325,56224834,56225373,56225624,56226179,56226356,56229014	56224441,56224935,56225511,56225695,56226260,56226419,56229854	Gene ID= ENSG00000139579.12 TPM= 13.81 Transcript Type= protein_coding
chr12	56224359	56229854	56224359	56229854	+	ENST00000380198.6@NABP2	ENST00000380198.6	protein_coding	56224359,56225373,56225624,56226179,56226356,56229014	56224935,56225511,56225695,56226260,56226419,56229854	Gene ID= ENSG00000139579.12 TPM= 9.56 Transcript Type= protein_coding
chr12	56237807	56258391	56237807	56258391	-	ENST00000267116.7@ANKRD52	ENST00000267116.7	protein_coding	56258243,56257828,56257283,56257015,56255784,56254865,56254578,56254067,56253722,56253288,56253004,56252780,56252502,56252175,56252015,56248759,56248495,56248023,56247687,56247493,56245377,56245103,56244906,56244652,56244353,56244051,56243785,56237807	56258391,56257911,56257361,56257085,56255984,56254952,56254720,56254279,56253800,56253402,56253086,56252897,56252570,56252315,56252095,56248870,56248566,56248224,56247774,56247610,56245596,56245190,56244989,56244797,56244435,56244133,56243876,56243392	Gene ID= ENSG00000139645.9 TPM= 27.62 Transcript Type= protein_coding
chr12	56251134	56251758	56251134	56251758	+	transcript2661.chr12.nnic@NA	transcript2661.chr12.nnic	NA	56251134	56251758	Gene ID= novel_gene_chr12_2662 TPM= 2.12 Transcript Type= NA
chr12	56266858	56270964	56266858	56270964	+	ENST00000308197.9@COQ10A	ENST00000308197.9	protein_coding	56266858,56267794,56269059,56269460,56270150	56267252,56267940,56269251,56269561,56270964	Gene ID= ENSG00000135469.13 TPM= 32.93 Transcript Type= protein_coding
chr12	56267283	56270966	56267283	56270966	+	ENST00000433805.6@COQ10A	ENST00000433805.6	protein_coding	56267283,56267794,56269059,56269460,56270150	56267433,56267940,56269251,56269561,56270966	Gene ID= ENSG00000135469.13 TPM= 56.29 Transcript Type= protein_coding
chr12	56267682	56270964	56267682	56270964	+	ENST00000546544.5@COQ10A	ENST00000546544.5	protein_coding	56267682,56269059,56269460,56270150	56267940,56269251,56269561,56270964	Gene ID= ENSG00000135469.13 TPM= 4.25 Transcript Type= protein_coding
chr12	56271701	56300391	56271701	56300391	-	ENST00000548567.5@CS	ENST00000548567.5	protein_coding	56300160,56298609,56286595,56285916,56283792,56282860,56282420,56275996,56275002,56274777,56273587,56271701	56300391,56298691,56286645,56286023,56283857,56282991,56282608,56276195,56275131,56274878,56273796,56273254	Gene ID= ENSG00000062485.18 TPM= 26.65 Transcript Type= protein_coding
chr12	56271701	56300392	56271701	56300392	-	ENST00000351328.7@CS	ENST00000351328.7	protein_coding	56300160,56286595,56285916,56283792,56282860,56282420,56275996,56275002,56274777,56273587,56271701	56300392,56286645,56286023,56283857,56282991,56282608,56276195,56275131,56274878,56273796,56273254	Gene ID= ENSG00000062485.18 TPM= 571.05 Transcript Type= protein_coding
chr12	56300142	56314788	56300142	56314788	+	ENST00000549565.1@AC073896.2	ENST00000549565.1	antisense_RNA	56300142,56312407,56314529	56300187,56312499,56314788	Gene ID= ENSG00000257303.1 TPM= 6.37 Transcript Type= antisense_RNA
chr12	56310428	56316336	56310428	56316336	-	ENST00000273308.8@CNPY2	ENST00000273308.8	protein_coding	56315821,56315130,56314851,56311211,56310958,56310428	56316336,56315242,56314966,56311414,56311054,56310595	Gene ID= ENSG00000257727.5 TPM= 19.12 Transcript Type= protein_coding
chr12	56316936	56334053	56316936	56334053	-	ENST00000440411.7@PAN2	ENST00000440411.7	protein_coding	56333862,56332813,56328472,56328238,56327995,56327364,56326617,56326313,56325335,56325009,56324581,56324294,56324049,56323807,56323500,56323311,56323062,56322615,56322423,56322078,56319864,56319621,56319308,56319088,56318237,56316936	56334053,56333208,56328641,56328358,56328072,56327631,56326959,56326409,56325454,56325128,56324709,56324493,56324185,56323913,56323598,56323384,56323209,56322758,56322482,56322168,56320021,56319764,56319487,56319181,56318434,56317643	Gene ID= ENSG00000135473.14 TPM= 8.5 Transcript Type= protein_coding
chr12	56417119	56449403	56417119	56449403	-	ENST00000229201.4@TIMELESS	ENST00000229201.4	protein_coding	56449310,56434074,56433773,56433538,56433381,56433026,56432369,56431471,56430881,56430105,56428883,56428549,56428236,56425015,56424762,56423797,56423584,56423274,56422847,56422106,56421899,56421727,56421351,56420963,56420813,56420569,56418134,56417907,56417119	56449403,56434231,56433926,56433652,56433443,56433127,56432521,56431604,56430968,56430281,56429100,56428652,56428405,56425152,56424913,56423894,56423707,56423475,56422992,56422191,56422016,56421809,56421493,56421134,56420881,56420687,56418359,56418008,56417786	Gene ID= ENSG00000111602.11 TPM= 3.19 Transcript Type= protein_coding
chr12	56589223	56591790	56589223	56591790	+	transcript2741.chr12.nnic@NA	transcript2741.chr12.nnic	NA	56589223	56591790	Gene ID= novel_gene_chr12_2742 TPM= 3.19 Transcript Type= NA
chr12	56590410	56594787	56590410	56594787	+	transcript2743.chr12.nnic@NA	transcript2743.chr12.nnic	NA	56590410	56594787	Gene ID= novel_gene_chr12_2744 TPM= 3.19 Transcript Type= NA
chr12	56594367	56595599	56594367	56595599	+	transcript2745.chr12.nnic@NA	transcript2745.chr12.nnic	NA	56594367	56595599	Gene ID= novel_gene_chr12_2746 TPM= 2.12 Transcript Type= NA
chr12	56598369	56630211	56598369	56630211	-	ENST00000549884.5@BAZ2A	ENST00000549884.5	protein_coding	56630125,56617395,56615014,56613953,56613015,56611773,56611573,56610409,56610114,56609736,56606633,56606247,56605830,56605073,56604585,56604217,56603520,56603359,56602713,56601546,56601180,56600943,56600681,56600201,56599964,56599702,56599129,56598868,56598369	56630211,56617532,56615607,56614138,56613233,56612246,56611633,56610517,56610215,56609946,56606733,56606312,56606063,56605327,56604799,56604291,56603700,56603418,56602857,56602192,56601402,56601098,56600832,56600490,56600096,56599848,56599358,56599011,56598783	Gene ID= ENSG00000076108.11 TPM= 9.56 Transcript Type= protein_coding
chr12	56638179	56646068	56638179	56646068	-	ENST00000262030.7@ATP5B	ENST00000262030.7	protein_coding	56645837,56645171,56644781,56643837,56643403,56642673,56642458,56639980,56639106,56638179	56646068,56645353,56644955,56643958,56643587,56642831,56642580,56640192,56639307,56638423	Gene ID= ENSG00000110955.8 TPM= 1466.6 Transcript Type= protein_coding
chr12	56663343	56688300	56663343	56688300	-	ENST00000262033.10@PTGES3	ENST00000262033.10	protein_coding	56687998,56672952,56672740,56671749,56670275,56666204,56664776,56663343	56688300,56673065,56672809,56671847,56670364,56666266,56664800,56664498	Gene ID= ENSG00000110958.15 TPM= 145.52 Transcript Type= protein_coding
chr12	56712433	56727197	56712433	56727197	-	ENST00000356769.7@NACA	ENST00000356769.7	protein_coding	56725263,56724452,56714602,56714362,56713537,56713062,56712786,56712433	56727197,56724523,56714687,56714439,56713683,56713190,56712908,56712552	Gene ID= ENSG00000196531.10 TPM= 195.44 Transcript Type= protein_coding
chr12	56712428	56725542	56712428	56725542	-	ENST00000454682.5@NACA	ENST00000454682.5	protein_coding	56725263,56724452,56715871,56714602,56714362,56713537,56713062,56712786,56712428	56725542,56724523,56721459,56714687,56714439,56713683,56713190,56712908,56712552	Gene ID= ENSG00000196531.10 TPM= 265.54 Transcript Type= protein_coding
chr12	56712435	56725267	56712435	56725267	-	ENST00000393891.8@NACA	ENST00000393891.8	protein_coding	56724962,56724452,56714602,56714362,56713537,56713062,56712786,56712435	56725267,56724523,56714687,56714439,56713683,56713190,56712908,56712552	Gene ID= ENSG00000196531.10 TPM= 31.33 Transcript Type= protein_coding
chr12	56731596	56752373	56731596	56752373	-	ENST00000552590.6@PRIM1	ENST00000552590.6	protein_coding	56752196,56751038,56746926,56746777,56746045,56744065,56742987,56741746,56741435,56739294,56738434,56734147,56731596	56752373,56751195,56747032,56746854,56746179,56744123,56743096,56741837,56741576,56739363,56738525,56734245,56731734	Gene ID= ENSG00000198056.13 TPM= 2.12 Transcript Type= nonsense_mediated_decay
chr12	57055643	57078763	57055643	57078763	-	ENST00000379391.7@NEMP1	ENST00000379391.7	protein_coding	57078619,57072788,57070820,57064646,57064071,57063119,57060772,57055643	57078763,57072912,57070893,57064739,57064185,57063344,57060945,57060059	Gene ID= ENSG00000166881.9 TPM= 1.59 Transcript Type= protein_coding
chr12	57055648	57078769	57055648	57078769	-	ENST00000300128.8@NEMP1	ENST00000300128.8	protein_coding	57078619,57072788,57070674,57069234,57064646,57064071,57063119,57060772,57055648	57078769,57072912,57070893,57069306,57064739,57064185,57063344,57060945,57060059	Gene ID= ENSG00000166881.9 TPM= 1.59 Transcript Type= protein_coding
chr12	57088894	57095476	57088894	57095476	+	ENST00000300131.7@NAB2	ENST00000300131.7	protein_coding	57088894,57091125,57092448,57092917,57093063,57093407,57094612	57089354,57091998,57092581,57092968,57093195,57093598,57095476	Gene ID= ENSG00000166886.12 TPM= 44.61 Transcript Type= protein_coding
chr12	57089094	57095475	57089094	57095475	+	ENST00000342556.6@NAB2	ENST00000342556.6	protein_coding	57089094,57091125,57092448,57092917,57093063,57094612	57089354,57091998,57092581,57092968,57093195,57095475	Gene ID= ENSG00000166886.12 TPM= 13.81 Transcript Type= protein_coding
chr12	57095408	57111433	57095408	57111433	-	ENST00000300134.7@STAT6	ENST00000300134.7	protein_coding	57111129,57108163,57107605,57107231,57106693,57106528,57106191,57105468,57105151,57104726,57104464,57102829,57102290,57099996,57099767,57099294,57099015,57098792,57098505,57097068,57096850,57095408	57111433,57108299,57107743,57107314,57106831,57106580,57106339,57105599,57105339,57104813,57104586,57102921,57102496,57100090,57099903,57099440,57099078,57098902,57098597,57097133,57096978,57096761	Gene ID= ENSG00000166888.11 TPM= 32.93 Transcript Type= protein_coding
chr12	57102983	57111410	57102983	57111410	-	transcript2798.chr12.nic@STAT6	transcript2798.chr12.nic	protein_coding	57111129,57108163,57107605,57107231,57106693,57106528,57105468,57105151,57104726,57102983	57111410,57108299,57107743,57107314,57106831,57106580,57106339,57105339,57104813,57104586	Gene ID= ENSG00000166888.11 TPM= 6.37 Transcript Type= NA
chr12	57216795	57226449	57216795	57226449	+	ENST00000349394.5@NXPH4	ENST00000349394.5	protein_coding	57216795,57224878	57217026,57226449	Gene ID= ENSG00000182379.9 TPM= 21.24 Transcript Type= protein_coding
chr12	57229327	57234931	57229327	57234931	+	ENST00000328923.7@SHMT2	ENST00000328923.7	protein_coding	57229327,57230803,57231481,57231713,57232211,57232453,57232704,57233180,57233563,57233749,57234003,57234234	57229811,57231000,57231560,57231913,57232292,57232575,57232843,57233345,57233662,57233904,57234110,57234931	Gene ID= ENSG00000182199.10 TPM= 13.28 Transcript Type= protein_coding
chr12	57230086	57234726	57230086	57234726	+	ENST00000414700.7@SHMT2	ENST00000414700.7	protein_coding	57230086,57230803,57231481,57231713,57232211,57232453,57232704,57233180,57233563,57233749,57234003,57234234	57230244,57231000,57231560,57231913,57232292,57232575,57232843,57233345,57233662,57233904,57234110,57234726	Gene ID= ENSG00000182199.10 TPM= 4.07 Transcript Type= protein_coding
chr12	57229573	57234935	57229573	57234935	+	ENST00000556825.5@SHMT2	ENST00000556825.5	protein_coding	57229573,57230803,57231713,57232211,57232453,57232704,57233180,57233563,57233749,57234003,57234234	57229811,57231000,57231913,57232292,57232575,57232843,57233345,57233662,57233904,57234110,57234935	Gene ID= ENSG00000182199.10 TPM= 5.84 Transcript Type= nonsense_mediated_decay
chr12	57229711	57234726	57229711	57234726	+	ENST00000557487.5@SHMT2	ENST00000557487.5	protein_coding	57229711,57230803,57231481,57231713,57232211,57232483,57232704,57233180,57233563,57233749,57234003,57234234	57229811,57231000,57231560,57231913,57232292,57232575,57232843,57233345,57233662,57233904,57234110,57234726	Gene ID= ENSG00000182199.10 TPM= 4.6 Transcript Type= protein_coding
chr12	57229759	57234726	57229759	57234726	+	ENST00000557433.5@SHMT2	ENST00000557433.5	protein_coding	57229759,57230803,57231481,57231713,57232211,57232453,57232704,57233180,57233563,57233749,57234003,57234234	57229811,57231000,57231560,57231917,57232292,57232575,57232843,57233345,57233662,57233904,57234110,57234726	Gene ID= ENSG00000182199.10 TPM= 4.07 Transcript Type= nonsense_mediated_decay
chr12	57234905	57237102	57234905	57237102	-	transcript2823.chr12.nnic@NDUFA4L2	transcript2823.chr12.nnic	protein_coding	57237029,57235749,57234905	57237102,57235809,57235619	Gene ID= ENSG00000185633.10 TPM= 18.06 Transcript Type= NA
chr12	57253765	57431005	57253765	57431005	-	ENST00000402412.5@R3HDM2	ENST00000402412.5	protein_coding	57430720,57395749,57310264,57303176,57300095,57299352,57298090,57297328,57296411,57295399,57292572,57289009,57283824,57280358,57269752,57269323,57268922,57268303,57266731,57258890,57257990,57256414,57255990,57253765	57431005,57395818,57310463,57303217,57300181,57299478,57298168,57297387,57296551,57295507,57292667,57289040,57284056,57280530,57269994,57269449,57269082,57268457,57266831,57259059,57258137,57256511,57256074,57255113	Gene ID= ENSG00000179912.20 TPM= 111.53 Transcript Type= protein_coding
chr12	57472270	57478198	57472270	57478198	-	ENST00000430041.6@ARHGAP9	ENST00000430041.6	protein_coding	57477785,57477459,57477156,57476871,57476590,57476364,57476071,57475833,57475483,57475291,57474875,57474626,57474423,57474042,57473603,57472270	57478198,57477680,57477269,57476963,57476651,57476454,57476166,57475931,57475615,57475398,57474973,57474703,57474476,57474176,57473708,57472688	Gene ID= ENSG00000123329.17 TPM= 4.25 Transcript Type= protein_coding
chr12	57487957	57516649	57487957	57516649	+	ENST00000262027.9@MARS	ENST00000262027.9	protein_coding	57487957,57489019,57489267,57489424,57489896,57490207,57490538,57498157,57498420,57500321,57504225,57511698,57512008,57512236,57512751,57514720,57514954,57515150,57515920,57516245,57516435	57488199,57489109,57489345,57489558,57489971,57490379,57490644,57498273,57498623,57500522,57504299,57511868,57512103,57512353,57512964,57514851,57515058,57515336,57515991,57516337,57516649	Gene ID= ENSG00000166986.14 TPM= 74.25 Transcript Type= protein_coding
chr12	57488034	57516649	57488034	57516649	+	transcript2842.chr12.nic@MARS	transcript2842.chr12.nic	protein_coding	57488034,57489019,57489267,57489424,57489896,57490207,57490538,57498157,57498420,57500321,57504225,57511698,57512008,57512236,57512751,57514720,57514954,57515150,57515920,57516435	57488199,57489109,57489345,57489558,57489971,57490379,57490644,57498273,57498623,57500522,57504299,57511868,57512103,57512353,57512964,57514851,57515058,57515336,57516337,57516649	Gene ID= ENSG00000166986.14 TPM= 2.55 Transcript Type= NA
chr12	57488034	57516649	57488034	57516649	+	transcript2844.chr12.nnic@MARS	transcript2844.chr12.nnic	protein_coding	57488034,57489019,57489267,57489424,57489896,57490207,57490538,57498157,57498420,57500321,57504225,57511698,57512008,57512751,57514720,57514954,57515150,57515920,57516245,57516435	57488199,57489109,57489345,57489558,57489971,57490379,57490644,57498273,57498623,57500522,57504299,57511868,57512103,57512964,57514851,57515058,57515336,57515991,57516337,57516649	Gene ID= ENSG00000166986.14 TPM= 4.14 Transcript Type= NA
chr12	57488034	57516649	57488034	57516649	+	transcript2848.chr12.nic@MARS	transcript2848.chr12.nic	protein_coding	57488034,57489019,57489267,57489424,57489896,57490207,57490538,57498157,57498420,57500321,57504225,57511698,57512008,57514720,57514954,57515150,57515920,57516435	57488199,57489109,57489345,57489558,57489971,57490379,57490644,57498273,57498623,57500522,57504299,57511868,57512964,57514851,57515058,57515336,57516337,57516649	Gene ID= ENSG00000166986.14 TPM= 2.55 Transcript Type= NA
chr12	57488034	57516649	57488034	57516649	+	transcript2850.chr12.nic@MARS	transcript2850.chr12.nic	protein_coding	57488034,57489019,57489267,57489424,57489896,57490207,57490538,57498157,57498420,57500321,57504225,57511698,57512008,57514720,57514954,57515150,57516435	57488199,57489109,57489345,57489558,57489971,57490379,57490644,57498273,57498623,57500522,57504299,57511868,57512964,57514851,57515058,57516337,57516649	Gene ID= ENSG00000166986.14 TPM= 2.34 Transcript Type= NA
chr12	57488066	57516655	57488066	57516655	+	ENST00000545888.6@MARS	ENST00000545888.6	protein_coding	57488066,57489019,57489267,57489424,57490207,57490538,57498157,57498420,57500321,57504225,57511698,57512008,57512236,57512751,57514720,57514954,57515150,57515920,57516435	57488199,57489109,57489345,57489558,57490379,57490644,57498273,57498623,57500522,57504299,57511868,57512103,57512353,57512964,57514851,57515058,57515336,57516337,57516655	Gene ID= ENSG00000166986.14 TPM= 1.27 Transcript Type= nonsense_mediated_decay
chr12	57516593	57520517	57516593	57520517	-	ENST00000346473.7@DDIT3	ENST00000346473.7	protein_coding	57520418,57517706,57517269,57516593	57520517,57517753,57517438,57517180	Gene ID= ENSG00000175197.11 TPM= 25.49 Transcript Type= protein_coding
chr12	57516589	57520517	57516589	57520517	-	ENST00000551116.5@DDIT3	ENST00000551116.5	protein_coding	57520418,57517706,57517269,57516589	57520517,57517753,57517595,57517180	Gene ID= ENSG00000175197.11 TPM= 4.25 Transcript Type= protein_coding
chr12	57525951	57530143	57525951	57530143	+	transcript2867.chr12.nic@MBD6	transcript2867.chr12.nic	protein_coding	57525951,57526566,57527507,57527848,57528147,57528666,57528946,57529160,57529611,57529934	57526388,57527227,57527660,57528017,57528560,57528718,57529009,57529329,57529674,57530143	Gene ID= ENSG00000166987.14 TPM= 19.12 Transcript Type= NA
chr12	57530102	57547331	57530102	57547331	-	ENST00000548249.5@DCTN2	ENST00000548249.5	protein_coding	57547028,57546028,57535749,57535484,57535056,57534292,57533953,57533238,57532984,57532733,57532572,57532213,57532015,57530102	57547331,57546096,57535845,57535545,57535154,57534452,57534097,57533303,57533022,57532810,57532643,57532315,57532106,57530775	Gene ID= ENSG00000175203.15 TPM= 25.49 Transcript Type= protein_coding
chr12	57538371	57540073	57538371	57540073	+	transcript2870.chr12.nnic@NA	transcript2870.chr12.nnic	NA	57538371	57540073	Gene ID= novel_gene_chr12_2871 TPM= 3.19 Transcript Type= NA
chr12	57591243	57603418	57591243	57603418	+	transcript2874.chr12.nic@PIP4K2C	transcript2874.chr12.nic	protein_coding	57591243,57594025,57595126,57595888,57599065,57600324,57600811,57601245,57601526	57591463,57594122,57595222,57596031,57599211,57600437,57601078,57601348,57603418	Gene ID= ENSG00000166908.17 TPM= 3.19 Transcript Type= NA
chr12	57591203	57603418	57591203	57603418	+	ENST00000540759.6@PIP4K2C	ENST00000540759.6	protein_coding	57591203,57594025,57595126,57595888,57599065,57599400,57600324,57600811,57601245,57601526,57601926	57591463,57594122,57595222,57596031,57599211,57599438,57600437,57601078,57601348,57601636,57603418	Gene ID= ENSG00000166908.17 TPM= 3.19 Transcript Type= protein_coding
chr12	57604622	57609800	57604622	57609800	+	ENST00000548804.5@DTX3	ENST00000548804.5	protein_coding	57604622,57606190,57606443,57606865,57608520,57609077	57604858,57606252,57606518,57607613,57608737,57609800	Gene ID= ENSG00000178498.15 TPM= 18.06 Transcript Type= protein_coding
chr12	57604821	57609800	57604821	57609800	+	ENST00000337737.7@DTX3	ENST00000337737.7	protein_coding	57604821,57605571,57606190,57606443,57606865,57608520,57609077	57604858,57605731,57606252,57606518,57607613,57608737,57609800	Gene ID= ENSG00000178498.15 TPM= 16.99 Transcript Type= protein_coding
chr12	57629329	57633202	57629329	57633202	-	ENST00000550764.5@B4GALNT1	ENST00000550764.5	protein_coding	57632772,57631915,57631200,57630980,57630478,57629329	57633202,57632133,57631364,57631086,57630518,57630332	Gene ID= ENSG00000135454.13 TPM= 14.87 Transcript Type= protein_coding
chr12	57629329	57633192	57629329	57633192	-	transcript2888.chr12.nic@B4GALNT1	transcript2888.chr12.nic	protein_coding	57632772,57631915,57630980,57630478,57629329	57633192,57632133,57631086,57630518,57630332	Gene ID= ENSG00000135454.13 TPM= 5.31 Transcript Type= NA
chr12	57694091	57721557	57694091	57721557	+	transcript2895.chr12.nic@OS9	transcript2895.chr12.nic	protein_coding	57694091,57694750,57695780,57695962,57696275,57715760,57716412,57716693,57717870,57718146,57718993,57720406,57720784	57694323,57694926,57695843,57696038,57696373,57716193,57716512,57716744,57717958,57718421,57719182,57720518,57721557	Gene ID= ENSG00000135506.15 TPM= 13.19 Transcript Type= NA
chr12	57694121	57721555	57694121	57721555	+	ENST00000315970.11@OS9	ENST00000315970.11	protein_coding	57694121,57694750,57695780,57695962,57696275,57715760,57716092,57716412,57716693,57717870,57718146,57718993,57720099,57720406,57720784	57694323,57694926,57695843,57696038,57696373,57715970,57716193,57716512,57716744,57717958,57718421,57719182,57720263,57720518,57721555	Gene ID= ENSG00000135506.15 TPM= 118.17 Transcript Type= protein_coding
chr12	57694145	57721555	57694145	57721555	+	ENST00000257966.12@OS9	ENST00000257966.12	protein_coding	57694145,57694750,57695780,57695962,57696275,57715760,57716089,57716412,57716693,57717870,57718146,57718993,57720406,57720784	57694323,57694926,57695843,57696038,57696373,57715970,57716193,57716512,57716744,57717958,57718421,57719182,57720518,57721555	Gene ID= ENSG00000135506.15 TPM= 153.4 Transcript Type= protein_coding
chr12	57694147	57721557	57694147	57721557	+	ENST00000389142.9@OS9	ENST00000389142.9	protein_coding	57694147,57694750,57695780,57695962,57696275,57715760,57716092,57716412,57716693,57717870,57718146,57718993,57720406,57720784	57694323,57694926,57695843,57696038,57696373,57715970,57716193,57716512,57716744,57717958,57718376,57719182,57720518,57721557	Gene ID= ENSG00000135506.15 TPM= 9.47 Transcript Type= protein_coding
chr12	57744881	57748232	57744881	57748232	+	ENST00000257910.7@TSPAN31	ENST00000257910.7	protein_coding	57744881,57745745,57746176,57746589,57747018,57747216	57745217,57745912,57746256,57746720,57747131,57748232	Gene ID= ENSG00000135452.9 TPM= 61.61 Transcript Type= protein_coding
chr12	57747727	57752521	57747727	57752521	-	ENST00000257904.10@CDK4	ENST00000257904.10	protein_coding	57752175,57751500,57751207,57750923,57750656,57749454,57749182,57747727	57752521,57751736,57751342,57751090,57750765,57749504,57749317,57748617	Gene ID= ENSG00000135446.16 TPM= 6.37 Transcript Type= protein_coding
chr12	57768471	57772793	57768471	57772793	-	ENST00000324871.11@METTL1	ENST00000324871.11	protein_coding	57771974,57771094,57769772,57769565,57769303,57768471	57772793,57771257,57769956,57769678,57769404,57769151	Gene ID= ENSG00000037897.16 TPM= 2.12 Transcript Type= protein_coding
chr12	57778295	57781215	57778295	57781215	-	transcript2924.chr12.nnic@NA	transcript2924.chr12.nnic	NA	57778295	57781215	Gene ID= novel_gene_chr12_2925 TPM= 3.19 Transcript Type= NA
chr12	57782589	57797584	57782589	57797584	+	ENST00000454289.7@TSFM	ENST00000454289.7	protein_coding	57782589,57783110,57786163,57787040,57792986,57796177	57782858,57783283,57786291,57787162,57793073,57797584	Gene ID= ENSG00000123297.17 TPM= 45.67 Transcript Type= protein_coding
chr12	57822800	57846724	57822800	57846724	-	transcript2932.chr12.nic@CTDSP2	transcript2932.chr12.nic	protein_coding	57846372,57829448,57827534,57826996,57826346,57824227,57823904,57822800	57846724,57829596,57827590,57827097,57826402,57824319,57824089,57823727	Gene ID= ENSG00000175215.10 TPM= 7.44 Transcript Type= NA
chr12	57819927	57846739	57819927	57846739	-	ENST00000398073.6@CTDSP2	ENST00000398073.6	protein_coding	57846372,57829448,57827552,57826996,57826346,57824227,57823904,57819927	57846739,57829596,57827590,57827097,57826402,57824319,57824089,57823727	Gene ID= ENSG00000175215.10 TPM= 91.35 Transcript Type= protein_coding
chr12	57941577	57957269	57941577	57957269	+	ENST00000300145.3@ATP23	ENST00000300145.3	protein_coding	57941577,57945628,57946995,57951758,57953606,57956687	57941888,57945673,57947076,57951895,57953689,57957269	Gene ID= ENSG00000166896.7 TPM= 2.12 Transcript Type= protein_coding
chr12	58872149	58920522	58872149	58920522	-	ENST00000320743.7@LRIG3	ENST00000320743.7	protein_coding	58920000,58914265,58913982,58890665,58889996,58888819,58888329,58887789,58886810,58885831,58883520,58882869,58880581,58878824,58877400,58876445,58874430,58874055,58872149	58920522,58914336,58914056,58890796,58890139,58888962,58888472,58887932,58886890,58885902,58883591,58883032,58880901,58879105,58877852,58876603,58874573,58874330,58872816	Gene ID= ENSG00000139263.11 TPM= 3.72 Transcript Type= protein_coding
chr12	58885698	58920304	58885698	58920304	-	transcript2947.chr12.nic@LRIG3	transcript2947.chr12.nic	protein_coding	58920000,58914265,58913982,58890665,58889996,58888819,58888329,58887789,58886810,58885698	58920304,58914336,58914056,58890796,58890139,58888962,58888472,58887932,58886890,58885902	Gene ID= ENSG00000139263.11 TPM= 2.66 Transcript Type= NA
chr12	58904050	58906965	58904050	58906965	+	transcript2948.chr12.nnic@NA	transcript2948.chr12.nnic	NA	58904050	58906965	Gene ID= novel_gene_chr12_2949 TPM= 3.19 Transcript Type= NA
chr12	59664719	59781782	59664719	59781782	+	transcript2966.chr12.nnic@SLC16A7	transcript2966.chr12.nnic	protein_coding	59664719,59704772,59771219,59774657,59779423	59664845,59705018,59771362,59775475,59781782	Gene ID= ENSG00000118596.11 TPM= 3.19 Transcript Type= NA
chr12	59595983	59660557	59595983	59660557	+	transcript2967.chr12.nic@SLC16A7	transcript2967.chr12.nic	protein_coding	59595983,59655152	59596236,59660557	Gene ID= ENSG00000118596.11 TPM= 2.12 Transcript Type= NA
chr12	59596067	59780213	59596067	59780213	+	ENST00000552432.5@SLC16A7	ENST00000552432.5	protein_coding	59596067,59655152,59704792,59771219,59774657,59779423	59596236,59655250,59705018,59771362,59775475,59780213	Gene ID= ENSG00000118596.11 TPM= 13.81 Transcript Type= protein_coding
chr12	59673484	59676566	59673484	59676566	-	transcript2968.chr12.nnic@NA	transcript2968.chr12.nnic	NA	59673484	59676566	Gene ID= novel_gene_chr12_2969 TPM= 2.12 Transcript Type= NA
chr12	62260357	62406119	62260357	62406119	+	ENST00000280377.9@USP15	ENST00000280377.9	protein_coding	62260357,62294179,62302790,62314790,62321464,62325872,62349221,62355331,62381490,62383840,62384078,62389431,62389605,62389797,62390864,62391157,62391816,62392272,62393053,62396295,62401187,62404193	62260503,62294306,62302920,62314916,62321609,62325933,62349307,62355475,62381663,62383998,62384302,62389514,62389699,62389988,62390979,62391429,62391886,62392387,62393202,62396398,62401275,62406119	Gene ID= ENSG00000135655.15 TPM= 23.37 Transcript Type= protein_coding
chr12	62260338	62416389	62260338	62416389	+	ENST00000353364.7@USP15	ENST00000353364.7	protein_coding	62260338,62294179,62302790,62314790,62321464,62325872,62355331,62381490,62383840,62384078,62389431,62389605,62389797,62390864,62391157,62391816,62392272,62393053,62396295,62401187,62404193	62260503,62294306,62302920,62314916,62321609,62325933,62355475,62381663,62383998,62384302,62389514,62389699,62389988,62390979,62391429,62391886,62392387,62393202,62396398,62401275,62416389	Gene ID= ENSG00000135655.15 TPM= 18.06 Transcript Type= protein_coding
chr12	62313996	62404643	62313996	62404643	+	transcript2977.chr12.nnic@USP15	transcript2977.chr12.nnic	protein_coding	62313996,62314790,62321464,62325872,62349221,62355331,62381490,62383840,62384078,62389431,62389605,62389797,62390864,62391157,62391816,62392272,62393053,62396295,62401187,62404193	62314062,62314916,62321609,62325933,62349307,62355475,62381663,62383998,62384302,62389514,62389699,62389988,62390979,62391429,62391886,62392387,62393202,62396398,62401275,62404643	Gene ID= ENSG00000135655.15 TPM= 4.25 Transcript Type= NA
chr12	62260397	62336690	62260397	62336690	+	ENST00000312635.10@USP15	ENST00000312635.10	protein_coding	62260397,62294179,62302790,62314790,62321464,62325872,62335166	62260503,62294306,62302920,62314916,62321609,62325933,62336690	Gene ID= ENSG00000135655.15 TPM= 2.12 Transcript Type= protein_coding
chr12	62466795	62510343	62466795	62510343	+	transcript2989.chr12.nic@MON2	transcript2989.chr12.nic	protein_coding	62466795,62484170,62493915,62495016,62498919,62500783,62501573,62508286	62467318,62484233,62494042,62495147,62499048,62500880,62501698,62510343	Gene ID= ENSG00000061987.15 TPM= 2.12 Transcript Type= NA
chr12	62466849	62553365	62466849	62553365	+	ENST00000552115.5@MON2	ENST00000552115.5	protein_coding	62466849,62484170,62493915,62495016,62498919,62500783,62501573,62508286,62524515,62525084,62525949,62532438,62534845,62535525,62537151,62537602,62538096,62538252,62538415,62543097,62544898,62546897,62549668,62552881	62467318,62484233,62494042,62495147,62499048,62500880,62501698,62508480,62524639,62525220,62526102,62532670,62534926,62535709,62537263,62537706,62538176,62538325,62538505,62543198,62545008,62547072,62549830,62553365	Gene ID= ENSG00000061987.15 TPM= 3.19 Transcript Type= protein_coding
chr12	63558913	63668518	63558913	63668518	-	transcript3001.chr12.nnic@DPY19L2	transcript3001.chr12.nnic	protein_coding	63668057,63665835,63663758,63661344,63647245,63644403,63626469,63624040,63621238,63618151,63617304,63608616,63600306,63597809,63595966,63594087,63570758,63558913	63668518,63665859,63663845,63661481,63647365,63644496,63626526,63624131,63621337,63618228,63617390,63608675,63600386,63597910,63596037,63594133,63570857,63560662	Gene ID= ENSG00000177990.11 TPM= 7.97 Transcript Type= NA
chr12	63558913	63668457	63558913	63668457	-	transcript3002.chr12.nnic@DPY19L2	transcript3002.chr12.nnic	protein_coding	63668057,63665835,63663758,63661344,63647245,63644403,63626469,63624040,63621238,63618151,63617304,63600306,63597809,63595966,63594087,63570758,63558913	63668457,63665859,63663845,63661481,63647365,63644496,63626526,63624131,63621337,63618228,63617390,63600386,63597910,63596037,63594133,63570857,63560662	Gene ID= ENSG00000177990.11 TPM= 5.84 Transcript Type= NA
chr12	63591144	63668501	63591144	63668501	-	transcript3008.chr12.nnic@DPY19L2	transcript3008.chr12.nnic	protein_coding	63668057,63665835,63663758,63661344,63647245,63644403,63626469,63624040,63621238,63618151,63617304,63600306,63597809,63595966,63594087,63591144	63668501,63665859,63663845,63661481,63647365,63644496,63626526,63624131,63621337,63618228,63617390,63600386,63597910,63596037,63594133,63591936	Gene ID= ENSG00000177990.11 TPM= 2.12 Transcript Type= NA
chr12	63659827	63668689	63659827	63668689	-	transcript3025.chr12.nnic@DPY19L2	transcript3025.chr12.nnic	protein_coding	63668057,63666465,63665835,63663758,63659827	63668689,63666564,63665859,63663845,63661481	Gene ID= ENSG00000177990.11 TPM= 2.12 Transcript Type= NA
chr12	63659827	63668739	63659827	63668739	-	transcript3029.chr12.nic@DPY19L2	transcript3029.chr12.nic	protein_coding	63668057,63665835,63663758,63659827	63668739,63665859,63663845,63661481	Gene ID= ENSG00000177990.11 TPM= 6.37 Transcript Type= NA
chr12	63564304	63566474	63564304	63566474	-	transcript3032.chr12.nnic@NA	transcript3032.chr12.nnic	NA	63564304	63566474	Gene ID= novel_gene_chr12_3033 TPM= 2.12 Transcript Type= NA
chr12	63780117	63809520	63780117	63809520	+	transcript3042.chr12.nic@TMEM5	transcript3042.chr12.nic	protein_coding	63780117,63781019,63782541,63784970,63802091,63805234,63808675	63780462,63781174,63782704,63785072,63802405,63805404,63809520	Gene ID= ENSG00000118600.11 TPM= 2.12 Transcript Type= NA
chr12	63779899	63785759	63779899	63785759	+	transcript3049.chr12.nic@TMEM5	transcript3049.chr12.nic	protein_coding	63779899,63781019,63782541,63784970	63780129,63781174,63782704,63785759	Gene ID= ENSG00000118600.11 TPM= 2.12 Transcript Type= NA
chr12	63779803	63809520	63779803	63809520	+	ENST00000261234.10@TMEM5	ENST00000261234.10	protein_coding	63779803,63781019,63784970,63802091,63805234,63808675	63780129,63781174,63785072,63802405,63805404,63809520	Gene ID= ENSG00000118600.11 TPM= 21.24 Transcript Type= protein_coding
chr12	63779866	63809100	63779866	63809100	+	ENST00000543342.5@TMEM5	ENST00000543342.5	protein_coding	63779866,63781019,63782541,63784970,63802091,63805234,63808675	63780129,63781174,63782704,63785072,63802405,63805404,63809100	Gene ID= ENSG00000118600.11 TPM= 3.19 Transcript Type= nonsense_mediated_decay
chr12	63780126	63809558	63780126	63809558	+	ENST00000537373.5@TMEM5	ENST00000537373.5	protein_coding	63780126,63781019,63784970,63802091,63805234,63808675	63780462,63781174,63785072,63802405,63805404,63809558	Gene ID= ENSG00000118600.11 TPM= 2.12 Transcript Type= protein_coding
chr12	63843741	64042947	63843741	64042947	+	transcript3056.chr12.nic@SRGAP1	transcript3056.chr12.nic	protein_coding	63843741,63983947,63989910,64016950,64042790	63844883,63984142,63990072,64017012,64042947	Gene ID= ENSG00000196935.8 TPM= 6.37 Transcript Type= NA
chr12	64191083	64222291	64191083	64222291	-	ENST00000398055.7@C12orf66	ENST00000398055.7	protein_coding	64222003,64215678,64191083	64222291,64215963,64194658	Gene ID= ENSG00000174206.12 TPM= 1.06 Transcript Type= protein_coding
chr12	64222346	64285841	64222346	64285841	+	transcript3060.chr12.nnic@AC012158.1	transcript3060.chr12.nnic	transcribed_processed_pseudogene	64222346,64227874,64285501	64222543,64227985,64285841	Gene ID= ENSG00000243024.6 TPM= 2.12 Transcript Type= NA
chr12	64404339	64448679	64404339	64448679	+	transcript3065.chr12.nic@XPOT	transcript3065.chr12.nic	protein_coding	64404339,64409962,64414907,64416698,64418046,64418876,64420070,64420353,64421235,64423005,64423182,64424599,64425038,64425338,64425815,64428051,64430049,64431538,64433414,64434507,64434794,64435627,64439244,64445075,64448105	64404804,64410095,64414989,64416754,64418115,64419094,64420254,64420521,64421471,64423043,64423244,64424723,64425138,64425457,64425909,64428120,64430287,64431823,64433603,64434623,64434909,64435674,64439315,64445131,64448679	Gene ID= ENSG00000184575.11 TPM= 14.87 Transcript Type= NA
chr12	64451880	64502108	64451880	64502108	+	ENST00000331710.9@TBK1	ENST00000331710.9	protein_coding	64451880,64455840,64460189,64464334,64466901,64474230,64480012,64481842,64484303,64485455,64485926,64488487,64490041,64495483,64495699,64496367,64496949,64497163,64497648,64497968,64501330	64452187,64455957,64460329,64464463,64467082,64474390,64480122,64482021,64484499,64485513,64486017,64488588,64490119,64495604,64495775,64496406,64497050,64497259,64497754,64498039,64502108	Gene ID= ENSG00000183735.9 TPM= 28.68 Transcript Type= protein_coding
chr12	64682778	64697567	64682778	64697567	+	transcript3077.chr12.nnic@RASSF3	transcript3077.chr12.nnic	protein_coding	64682778,64684787,64688216,64691470,64694763	64682912,64684894,64688453,64691579,64697567	Gene ID= ENSG00000153179.12 TPM= 2.12 Transcript Type= NA
chr12	64610513	64697567	64610513	64697567	+	ENST00000542104.5@RASSF3	ENST00000542104.5	protein_coding	64610513,64684787,64688216,64691470,64694763	64610743,64684894,64688453,64691579,64697567	Gene ID= ENSG00000153179.12 TPM= 53.11 Transcript Type= protein_coding
chr12	64622218	64623891	64622218	64623891	-	transcript3080.chr12.nnic@NA	transcript3080.chr12.nnic	NA	64622218	64623891	Gene ID= novel_gene_chr12_3081 TPM= 3.19 Transcript Type= NA
chr12	64713449	64759447	64713449	64759447	-	ENST00000258145.7@GNS	ENST00000258145.7	protein_coding	64759085,64752698,64747712,64745659,64744809,64743141,64740606,64739381,64737004,64728956,64723006,64721595,64720022,64713449	64759447,64752757,64747918,64745724,64744907,64743308,64740688,64739499,64737107,64729057,64723113,64721705,64720182,64716819	Gene ID= ENSG00000135677.10 TPM= 75.41 Transcript Type= protein_coding
chr12	65169571	65248327	65169571	65248327	+	ENST00000308330.2@LEMD3	ENST00000308330.2	protein_coding	65169571,65210926,65215977,65218552,65238502,65238669,65239929,65240136,65240909,65243388,65245669,65245861,65246162	65171118,65210963,65216043,65218619,65238581,65238814,65240030,65240238,65241087,65243469,65245774,65245939,65248327	Gene ID= ENSG00000174106.2 TPM= 10.62 Transcript Type= protein_coding
chr12	65221738	65224507	65221738	65224507	-	transcript3099.chr12.nnic@NA	transcript3099.chr12.nnic	NA	65221738	65224507	Gene ID= novel_gene_chr12_3100 TPM= 5.31 Transcript Type= NA
chr12	65278987	65466898	65278987	65466898	+	ENST00000614640.4@MSRB3	ENST00000614640.4	protein_coding	65278987,65308529,65326826,65328526,65368998,65453728,65463155	65279071,65308655,65326934,65328603,65369026,65453825,65466898	Gene ID= ENSG00000174099.10 TPM= 20.45 Transcript Type= protein_coding
chr12	65278643	65466906	65278643	65466906	+	ENST00000355192.7@MSRB3	ENST00000355192.7	protein_coding	65278643,65326826,65328526,65368998,65453728,65463155	65278865,65326934,65328603,65369026,65453825,65466906	Gene ID= ENSG00000174099.10 TPM= 32.13 Transcript Type= protein_coding
chr12	65375015	65377422	65375015	65377422	-	transcript3136.chr12.nnic@NA	transcript3136.chr12.nnic	NA	65375015	65377422	Gene ID= novel_gene_chr12_3137 TPM= 14.87 Transcript Type= NA
chr12	66137842	66169980	66137842	66169980	-	ENST00000545407.5@TMBIM4	ENST00000545407.5	protein_coding	66169855,66168915,66153340,66152271,66147908,66145841,66138724,66137842	66169980,66169353,66153448,66152376,66147941,66145958,66138769,66138166	Gene ID= ENSG00000155957.17 TPM= 1.06 Transcript Type= nonsense_mediated_decay
chr12	66135846	66170072	66135846	66170072	-	ENST00000358230.7@TMBIM4	ENST00000358230.7	protein_coding	66169855,66153340,66152271,66147908,66145841,66138724,66135846	66170072,66153448,66152376,66147941,66145958,66138769,66138166	Gene ID= ENSG00000155957.17 TPM= 26.55 Transcript Type= protein_coding
chr12	66137839	66170027	66137839	66170027	-	ENST00000633367.1@TMBIM4	ENST00000633367.1	protein_coding	66169855,66153340,66152271,66147908,66145841,66138724,66137839	66170027,66153410,66152376,66147941,66145958,66138769,66138166	Gene ID= ENSG00000155957.17 TPM= 2.12 Transcript Type= nonsense_mediated_decay
chr12	66137834	66169998	66137834	66169998	-	ENST00000398033.8@TMBIM4	ENST00000398033.8	protein_coding	66169855,66153340,66152271,66147908,66145841,66137834	66169998,66153448,66152376,66147941,66145958,66138166	Gene ID= ENSG00000155957.17 TPM= 2.12 Transcript Type= protein_coding
chr12	66137920	66169999	66137920	66169999	-	ENST00000542724.5@TMBIM4	ENST00000542724.5	protein_coding	66169855,66153340,66152271,66147908,66145841,66138724,66137920	66169999,66153448,66152376,66147941,66145958,66138734,66138166	Gene ID= ENSG00000155957.17 TPM= 1.06 Transcript Type= protein_coding
chr12	66167121	66168233	66167121	66168233	+	transcript3173.chr12.nnic@NA	transcript3173.chr12.nnic	NA	66167121	66168233	Gene ID= novel_gene_chr12_3174 TPM= 2.12 Transcript Type= NA
chr12	67269281	67319951	67269281	67319951	+	ENST00000545606.5@CAND1	ENST00000545606.5	protein_coding	67269281,67281910,67292622,67295033,67297407,67297748,67298950,67302323,67304605,67305104,67307397,67309901,67310152,67311693,67312606	67269785,67282053,67292776,67295156,67297663,67297853,67299095,67302615,67304746,67306597,67307492,67310070,67310316,67311800,67319951	Gene ID= ENSG00000111530.12 TPM= 15.93 Transcript Type= protein_coding
chr12	67648696	67658897	67648696	67658897	+	transcript3187.chr12.nnic@DYRK2	transcript3187.chr12.nnic	protein_coding	67648696,67649797,67650734,67657106	67649182,67649945,67650794,67658897	Gene ID= ENSG00000127334.10 TPM= 4.25 Transcript Type= NA
chr12	67648721	67665406	67648721	67665406	+	ENST00000344096.3@DYRK2	ENST00000344096.3	protein_coding	67648721,67649797,67657106	67649182,67649945,67665406	Gene ID= ENSG00000127334.10 TPM= 10.62 Transcript Type= protein_coding
chr12	67648778	67658909	67648778	67658909	+	ENST00000393555.3@DYRK2	ENST00000393555.3	protein_coding	67648778,67657106	67649182,67658909	Gene ID= ENSG00000127334.10 TPM= 16.99 Transcript Type= protein_coding
chr12	67929263	67970017	67929263	67970017	+	ENST00000546170.1@LINC01479	ENST00000546170.1	lincRNA	67929263,67932277,67969812	67929387,67932389,67970017	Gene ID= ENSG00000255772.5 TPM= 1.06 Transcript Type= lincRNA
chr12	68610839	68671901	68610839	68671901	+	ENST00000250559.13@RAP1B	ENST00000250559.13	protein_coding	68610839,68648699,68650400,68651995,68654112,68656306,68657101,68659280	68611043,68648781,68650468,68652051,68654252,68656449,68657217,68671901	Gene ID= ENSG00000127314.17 TPM= 2.12 Transcript Type= protein_coding
chr12	68610858	68660522	68610858	68660522	+	ENST00000393436.9@RAP1B	ENST00000393436.9	protein_coding	68610858,68648699,68650400,68651995,68654112,68656306,68657101,68659280	68611052,68648781,68650468,68652051,68654252,68656449,68657217,68660522	Gene ID= ENSG00000127314.17 TPM= 42.49 Transcript Type= protein_coding
chr12	68674371	68686859	68674371	68686859	-	ENST00000500695.2@AC090061.1	ENST00000500695.2	lincRNA	68686737,68685859,68674371	68686859,68686017,68675821	Gene ID= ENSG00000247363.2 TPM= 1.06 Transcript Type= lincRNA
chr12	68686734	68745809	68686734	68745809	+	ENST00000229179.8@NUP107	ENST00000229179.8	protein_coding	68686734,68688962,68689533,68690631,68691968,68696819,68700726,68702736,68709238,68710005,68713730,68715627,68719341,68719578,68721118,68721841,68722104,68725727,68726499,68727351,68731110,68731607,68732637,68733452,68734708,68735231,68741813,68742355	68687073,68689053,68689619,68690746,68692112,68696922,68700853,68702784,68709309,68710093,68713808,68715740,68719431,68719654,68721177,68721986,68722152,68725796,68726617,68727389,68731260,68731719,68732739,68733612,68734833,68735344,68741980,68745809	Gene ID= ENSG00000111581.9 TPM= 1.06 Transcript Type= protein_coding
chr12	68686967	68715513	68686967	68715513	+	transcript3211.chr12.nic@NUP107	transcript3211.chr12.nic	protein_coding	68686967,68688962,68689533,68690631,68691968,68696819,68700726,68702736,68709238,68710005,68713730	68687073,68689053,68689619,68690746,68692112,68696922,68700853,68702784,68709309,68710093,68715513	Gene ID= ENSG00000111581.9 TPM= 2.12 Transcript Type= NA
chr12	68840837	68841607	68840837	68841607	-	transcript3222.chr12.nnic@NA	transcript3222.chr12.nnic	NA	68840837	68841607	Gene ID= novel_gene_chr12_3223 TPM= 40.36 Transcript Type= NA
chr12	68851175	68933199	68851175	68933199	-	ENST00000551568.5@CPM	ENST00000551568.5	protein_coding	68933142,68932678,68885792,68871784,68870215,68869325,68866896,68858923,68851175	68933199,68932840,68885889,68871956,68870399,68869495,68867048,68859071,68856679	Gene ID= ENSG00000135678.11 TPM= 1.06 Transcript Type= protein_coding
chr12	69239537	69274358	69239537	69274358	+	ENST00000435070.6@CPSF6	ENST00000435070.6	protein_coding	69239537,69251129,69253051,69256697,69257732,69258590,69259428,69260044,69262373,69269512	69239706,69251338,69253154,69256842,69257905,69259094,69259543,69260197,69262562,69274358	Gene ID= ENSG00000111605.16 TPM= 3.19 Transcript Type= protein_coding
chr12	69239566	69266042	69239566	69266042	+	transcript3240.chr12.nic@CPSF6	transcript3240.chr12.nic	protein_coding	69239566,69251129,69253051,69256697,69257732,69258590,69259428,69260044,69262373	69239706,69251338,69253154,69256842,69257905,69259094,69259543,69260197,69266042	Gene ID= ENSG00000111605.16 TPM= 4.25 Transcript Type= NA
chr12	69265600	69272727	69265600	69272727	-	transcript3242.chr12.nnic@NA	transcript3242.chr12.nnic	NA	69265600	69272727	Gene ID= novel_gene_chr12_3243 TPM= 13.81 Transcript Type= NA
chr12	69348341	69354234	69348341	69354234	+	ENST00000261267.6@LYZ	ENST00000261267.6	protein_coding	69348341,69350108,69352220,69353153	69348544,69350272,69352298,69354234	Gene ID= ENSG00000090382.6 TPM= 8.5 Transcript Type= protein_coding
chr12	69359703	69390796	69359703	69390796	+	ENST00000247843.6@YEATS4	ENST00000247843.6	protein_coding	69359703,69362788,69365633,69365790,69370706,69370888,69390147	69360023,69362907,69365699,69365884,69370798,69370975,69390796	Gene ID= ENSG00000127337.6 TPM= 14.87 Transcript Type= protein_coding
chr12	69585334	69601570	69585334	69601570	+	ENST00000299300.10@CCT2	ENST00000299300.10	protein_coding	69585334,69586270,69586753,69587505,69587930,69588150,69589485,69592059,69592976,69593510,69597156,69597638,69597968,69598322,69599863,69601295	69585524,69586344,69586818,69587616,69588006,69588262,69589687,69592159,69593103,69593613,69597275,69597766,69598071,69598421,69600004,69601570	Gene ID= ENSG00000166226.12 TPM= 78.6 Transcript Type= protein_coding
chr12	69608564	69611162	69608564	69611162	-	ENST00000361484.4@LRRC10	ENST00000361484.4	protein_coding	69608564	69611162	Gene ID= ENSG00000198812.4 TPM= 73.29 Transcript Type= protein_coding
chr12	69738681	69817377	69738681	69817377	+	ENST00000247833.11@RAB3IP	ENST00000247833.11	protein_coding	69738681,69755384,69756405,69784720,69794437,69795141,69800209,69801609,69812778,69812964,69815364	69739031,69755659,69756663,69784815,69794514,69795344,69800337,69801721,69812877,69813033,69817377	Gene ID= ENSG00000127328.21 TPM= 10.62 Transcript Type= protein_coding
chr12	69756317	69815725	69756317	69815725	+	transcript3261.chr12.nic@RAB3IP	transcript3261.chr12.nic	protein_coding	69756317,69784720,69794437,69795141,69800209,69801609,69812778,69812964,69815364	69756663,69784815,69794514,69795344,69800337,69801721,69812877,69813033,69815725	Gene ID= ENSG00000127328.21 TPM= 2.12 Transcript Type= NA
chr12	69820635	69822840	69820635	69822840	+	transcript3263.chr12.nnic@NA	transcript3263.chr12.nnic	NA	69820635	69822840	Gene ID= novel_gene_chr12_3264 TPM= 3.19 Transcript Type= NA
chr12	70242306	70243360	70242306	70243360	-	ENST00000549651.1@LINC01481	ENST00000549651.1	antisense_RNA	70243066,70242306	70243360,70242893	Gene ID= ENSG00000257815.5 TPM= 3.19 Transcript Type= antisense_RNA
chr12	70242489	70243358	70242489	70243358	-	ENST00000553135.1@LINC01481	ENST00000553135.1	antisense_RNA	70243312,70242489	70243358,70242893	Gene ID= ENSG00000257815.5 TPM= 1.06 Transcript Type= antisense_RNA
chr12	70243431	70353938	70243431	70353938	+	transcript3269.chr12.nic@CNOT2	transcript3269.chr12.nic	protein_coding	70243431,70278132,70294071,70310895,70319298,70329423,70330287,70332767,70335438,70337389,70338443,70338666,70342107,70342258,70344128,70346180,70353829	70243480,70278274,70294294,70311017,70319364,70329570,70330469,70332846,70335563,70337513,70338563,70338822,70342168,70342307,70344228,70346324,70353938	Gene ID= ENSG00000111596.11 TPM= 2.66 Transcript Type= NA
chr12	70243431	70353938	70243431	70353938	+	transcript3270.chr12.nic@CNOT2	transcript3270.chr12.nic	protein_coding	70243431,70278132,70294237,70310895,70319298,70329423,70330287,70332767,70335438,70337389,70338443,70338666,70342107,70342258,70344128,70346180,70353829	70243480,70278274,70294294,70311017,70319364,70329570,70330469,70332846,70335563,70337513,70338563,70338822,70342168,70342307,70344228,70346324,70353938	Gene ID= ENSG00000111596.11 TPM= 3.72 Transcript Type= NA
chr12	70243431	70354350	70243431	70354350	+	transcript3281.chr12.nic@CNOT2	transcript3281.chr12.nic	protein_coding	70243431,70278132,70310895,70319298,70335438,70337389,70338443,70338666,70342107,70342258,70344128,70346180,70353829	70243480,70278274,70311017,70319364,70335563,70337513,70338563,70338822,70342168,70342307,70344228,70346324,70354350	Gene ID= ENSG00000111596.11 TPM= 2.12 Transcript Type= NA
chr12	70284246	70286460	70284246	70286460	-	transcript3286.chr12.nnic@NA	transcript3286.chr12.nnic	NA	70284246	70286460	Gene ID= novel_gene_chr12_3287 TPM= 8.5 Transcript Type= NA
chr12	70590941	70610024	70590941	70610024	-	transcript3296.chr12.nic@PTPRB	transcript3296.chr12.nic	protein_coding	70609761,70609069,70596049,70594467,70590941	70610024,70609339,70596327,70594724,70592545	Gene ID= ENSG00000127329.15 TPM= 2.12 Transcript Type= NA
chr12	70550281	70571454	70550281	70571454	+	transcript3293.chr12.nnic@AC083809.1	transcript3293.chr12.nnic	antisense_RNA	70550281,70557980,70560605,70569498,70570872	70550447,70558078,70560996,70570060,70571454	Gene ID= ENSG00000277247.1 TPM= 2.12 Transcript Type= NA
chr12	70550281	70571446	70550281	70571446	+	transcript3294.chr12.nnic@AC083809.1	transcript3294.chr12.nnic	antisense_RNA	70550281,70557980,70560605,70569498,70570872	70550447,70558078,70560996,70570140,70571446	Gene ID= ENSG00000277247.1 TPM= 2.12 Transcript Type= NA
chr12	70550281	70571446	70550281	70571446	+	transcript3300.chr12.nnic@AC083809.1	transcript3300.chr12.nnic	antisense_RNA	70550281,70557980,70569498,70570872	70550447,70558078,70570140,70571446	Gene ID= ENSG00000277247.1 TPM= 2.12 Transcript Type= NA
chr12	70550322	70571446	70550322	70571446	+	transcript3307.chr12.nnic@AC083809.1	transcript3307.chr12.nnic	antisense_RNA	70550322,70569498,70570872	70550447,70570140,70571446	Gene ID= ENSG00000277247.1 TPM= 2.12 Transcript Type= NA
chr12	71609472	71663969	71609472	71663969	-	ENST00000378743.7@ZFC3H1	ENST00000378743.7	protein_coding	71663013,71656885,71647749,71644877,71644095,71642436,71638418,71636850,71636490,71635443,71634704,71634155,71633264,71632886,71631972,71631778,71630823,71630600,71629609,71628918,71627751,71626260,71624104,71623360,71620210,71619926,71619315,71615206,71614834,71614535,71613335,71611786,71611058,71610695,71609472	71663969,71657301,71647813,71645075,71644318,71642559,71638515,71637059,71636654,71635580,71634825,71634304,71633438,71633017,71632514,71631887,71630954,71630721,71629710,71629037,71627934,71626446,71624292,71623597,71620315,71620124,71619409,71615316,71614938,71614700,71613435,71611887,71611097,71610757,71610565	Gene ID= ENSG00000133858.15 TPM= 1.06 Transcript Type= protein_coding
chr12	71661486	71663833	71661486	71663833	-	transcript3319.chr12.nnic@NA	transcript3319.chr12.nnic	NA	71661486	71663833	Gene ID= novel_gene_chr12_3320 TPM= 2.12 Transcript Type= NA
chr12	71663009	71680639	71663009	71680639	+	ENST00000308086.2@THAP2	ENST00000308086.2	protein_coding	71663009,71674203,71676689	71664580,71674398,71680639	Gene ID= ENSG00000173451.6 TPM= 15.93 Transcript Type= protein_coding
chr12	71686072	71704056	71686072	71704056	+	transcript3322.chr12.nic@TMEM19	transcript3322.chr12.nic	protein_coding	71686072,71689591,71696436,71697280,71698900,71700832,71703977	71686810,71689704,71696573,71697534,71699109,71701025,71704056	Gene ID= ENSG00000139291.13 TPM= 6.37 Transcript Type= NA
chr12	71686072	71703226	71686072	71703226	+	transcript3325.chr12.nnic@TMEM19	transcript3325.chr12.nnic	protein_coding	71686072,71689591,71696436,71697280,71698900,71700832,71702975	71686810,71689704,71696573,71697534,71699109,71702496,71703226	Gene ID= ENSG00000139291.13 TPM= 10.62 Transcript Type= NA
chr12	71785972	71790004	71785972	71790004	+	transcript3342.chr12.nnic@NA	transcript3342.chr12.nnic	NA	71785972	71790004	Gene ID= novel_gene_chr12_3343 TPM= 10.62 Transcript Type= NA
chr12	71839759	71923645	71839759	71923645	+	ENST00000485960.6@TBC1D15	ENST00000485960.6	protein_coding	71839759,71872070,71872929,71880469,71884811,71893222,71894686,71895947,71896677,71897847,71907022,71913826,71917698,71918451,71920731,71921368,71922983	71839811,71872168,71873003,71880607,71885021,71893324,71894883,71896075,71896780,71897941,71907138,71913926,71917797,71918548,71920847,71921454,71923645	Gene ID= ENSG00000121749.15 TPM= 2.12 Transcript Type= protein_coding
chr12	71876789	71879738	71876789	71879738	-	transcript3350.chr12.nnic@NA	transcript3350.chr12.nnic	NA	71876789	71879738	Gene ID= novel_gene_chr12_3351 TPM= 2.12 Transcript Type= NA
chr12	74537789	74541447	74537789	74541447	+	transcript3352.chr12.nnic@NA	transcript3352.chr12.nnic	NA	74537789	74541447	Gene ID= novel_gene_chr12_3353 TPM= 75.41 Transcript Type= NA
chr12	75359884	75390910	75359884	75390910	-	ENST00000548958.2@CAPS2	ENST00000548958.2	protein_coding	75390838,75359884	75390910,75361019	Gene ID= ENSG00000180881.19 TPM= 1.06 Transcript Type= processed_transcript
chr12	75391070	75432688	75391070	75432688	+	ENST00000550916.5@GLIPR1L2	ENST00000550916.5	protein_coding	75391070,75410434,75413598,75422904,75430715,75430824	75391350,75410679,75413701,75422989,75430741,75432688	Gene ID= ENSG00000180481.10 TPM= 2.12 Transcript Type= protein_coding
chr12	75391109	75424040	75391109	75424040	+	ENST00000320460.8@GLIPR1L2	ENST00000320460.8	protein_coding	75391109,75410434,75413598,75422904	75391350,75410679,75413701,75424040	Gene ID= ENSG00000180481.10 TPM= 4.25 Transcript Type= protein_coding
chr12	75480680	75503853	75480680	75503853	+	ENST00000266659.7@GLIPR1	ENST00000266659.7	protein_coding	75480680,75481834,75490406,75495577,75498694,75498824	75481054,75482079,75490518,75495662,75498720,75503853	Gene ID= ENSG00000139278.9 TPM= 4.25 Transcript Type= protein_coding
chr12	75496674	75499709	75496674	75499709	+	transcript3365.chr12.nnic@NA	transcript3365.chr12.nnic	NA	75496674	75499709	Gene ID= novel_gene_chr12_3366 TPM= 4.25 Transcript Type= NA
chr12	76025447	76033932	76025447	76033932	-	ENST00000266671.9@PHLDA1	ENST00000266671.9	protein_coding	76030510,76025447	76033932,76030092	Gene ID= ENSG00000139289.13 TPM= 103.03 Transcript Type= protein_coding
chr12	76047428	76084685	76047428	76084685	-	transcript3393.chr12.nic@NAP1L1	transcript3393.chr12.nic	protein_coding	76084567,76074203,76068909,76067371,76060138,76059798,76057744,76056033,76055019,76053770,76053205,76053091,76050531,76049756,76049200,76047428	76084685,76074239,76068994,76067473,76060279,76059878,76057776,76056161,76055090,76053909,76053350,76053110,76050653,76049785,76049250,76048464	Gene ID= ENSG00000187109.13 TPM= 5.84 Transcript Type= NA
chr12	76047596	76084625	76047596	76084625	-	transcript3404.chr12.nic@NAP1L1	transcript3404.chr12.nic	protein_coding	76084567,76074203,76060138,76059798,76056033,76055019,76053770,76053205,76053091,76050531,76049756,76049200,76048393,76047596	76084625,76074239,76060279,76059878,76056161,76055090,76053909,76053350,76053110,76050653,76049785,76049250,76048464,76047718	Gene ID= ENSG00000187109.13 TPM= 8.5 Transcript Type= NA
chr12	76049429	76084751	76049429	76084751	-	transcript3416.chr12.nic@NAP1L1	transcript3416.chr12.nic	protein_coding	76084567,76074203,76060138,76059798,76056033,76055019,76053770,76053205,76053091,76050531,76049756,76049429	76084751,76074239,76060279,76059878,76056161,76055090,76053909,76053350,76053110,76050653,76049785,76049525	Gene ID= ENSG00000187109.13 TPM= 3.19 Transcript Type= NA
chr12	76049562	76084666	76049562	76084666	-	transcript3420.chr12.nic@NAP1L1	transcript3420.chr12.nic	protein_coding	76084567,76074203,76060138,76059798,76056033,76055019,76053770,76053205,76053091,76050531,76049562	76084666,76074239,76060279,76059878,76056161,76055090,76053909,76053350,76053110,76050653,76049785	Gene ID= ENSG00000187109.13 TPM= 9.03 Transcript Type= NA
chr12	76047967	76084731	76047967	76084731	-	ENST00000544816.5@NAP1L1	ENST00000544816.5	protein_coding	76084567,76060138,76059798,76056033,76055019,76053770,76053205,76053091,76050531,76049756,76049200,76047967	76084731,76060279,76059878,76056161,76055090,76053909,76053350,76053110,76050653,76049785,76049250,76048464	Gene ID= ENSG00000187109.13 TPM= 1.06 Transcript Type= protein_coding
chr12	76047632	76084729	76047632	76084729	-	ENST00000547773.5@NAP1L1	ENST00000547773.5	protein_coding	76084567,76074203,76060138,76059798,76056033,76055019,76053770,76053205,76053091,76050531,76049756,76049200,76047632	76084729,76074239,76060279,76059878,76056161,76055090,76053909,76053350,76053110,76050653,76049785,76049250,76048464	Gene ID= ENSG00000187109.13 TPM= 3.72 Transcript Type= protein_coding
chr12	76073336	76077999	76073336	76077999	+	transcript3432.chr12.nnic@NA	transcript3432.chr12.nnic	NA	76073336	76077999	Gene ID= novel_gene_chr12_3433 TPM= 18.06 Transcript Type= NA
chr12	76082359	76083493	76082359	76083493	+	transcript3434.chr12.nnic@NA	transcript3434.chr12.nnic	NA	76082359	76083493	Gene ID= novel_gene_chr12_3435 TPM= 12.75 Transcript Type= NA
chr12	76344474	76348442	76344474	76348442	-	ENST00000393262.3@BBS10	ENST00000393262.3	protein_coding	76348162,76344474	76348442,76347787	Gene ID= ENSG00000179941.6 TPM= 6.37 Transcript Type= protein_coding
chr12	76763588	76853696	76763588	76853696	+	ENST00000426126.6@ZDHHC17	ENST00000426126.6	protein_coding	76763588,76797434,76805317,76809043,76809713,76815146,76815857,76822406,76826908,76828390,76841982,76842919,76845709,76846596,76848233,76849376,76850847	76764329,76797537,76805439,76809120,76809857,76815210,76816019,76822531,76827050,76828490,76842106,76842981,76845802,76846679,76848390,76849470,76853696	Gene ID= ENSG00000186908.14 TPM= 4.25 Transcript Type= protein_coding
chr12	76858715	76879060	76858715	76879060	-	ENST00000311083.9@CSRP2	ENST00000311083.9	protein_coding	76878938,76866149,76863176,76860284,76859547,76858715	76879060,76866261,76863344,76860413,76859640,76859028	Gene ID= ENSG00000175183.9 TPM= 9.56 Transcript Type= protein_coding
chr12	79797330	79935186	79797330	79935186	-	transcript3459.chr12.nnic@PPP1R12A	transcript3459.chr12.nnic	protein_coding	79934695,79872808,79845302,79832332,79828320,79822116,79821078,79820774,79817394,79810395,79809795,79808483,79807226,79806166,79805592,79798494,79797330	79935186,79872938,79845420,79832491,79828464,79822190,79821166,79820931,79817518,79810511,79810010,79808577,79807330,79806333,79805768,79798584,79797395	Gene ID= ENSG00000058272.16 TPM= 32.22 Transcript Type= NA
chr12	79773568	79935198	79773568	79935198	-	ENST00000450142.6@PPP1R12A	ENST00000450142.6	protein_coding	79934695,79872808,79845302,79832332,79828320,79822116,79821078,79820774,79817394,79809795,79808483,79807226,79806166,79805592,79798494,79797195,79796782,79795638,79793863,79790467,79788648,79786374,79781815,79778550,79773568	79935198,79872938,79845420,79832491,79828464,79822190,79821166,79820931,79817518,79810010,79808577,79807330,79806333,79805768,79798584,79797395,79796950,79795759,79793928,79790483,79788783,79786478,79781862,79778600,79776015	Gene ID= ENSG00000058272.16 TPM= 11.68 Transcript Type= protein_coding
chr12	79797330	79935186	79797330	79935186	-	transcript3461.chr12.nnic@PPP1R12A	transcript3461.chr12.nnic	protein_coding	79934695,79872808,79845302,79832332,79828320,79822116,79821078,79820774,79817394,79810395,79809795,79808483,79807226,79805592,79798494,79797330	79935186,79872938,79845420,79832491,79828464,79822190,79821166,79820931,79817518,79810511,79810010,79808577,79807330,79805768,79798584,79797395	Gene ID= ENSG00000058272.16 TPM= 8.85 Transcript Type= NA
chr12	79797330	79935186	79797330	79935186	-	transcript3462.chr12.nnic@PPP1R12A	transcript3462.chr12.nnic	protein_coding	79934695,79872808,79845302,79832332,79828320,79822116,79821078,79820774,79817394,79810395,79809795,79808483,79807226,79806166,79798494,79797330	79935186,79872938,79845420,79832491,79828464,79822190,79821166,79820931,79817518,79810511,79810010,79808577,79807330,79806333,79798584,79797395	Gene ID= ENSG00000058272.16 TPM= 4.6 Transcript Type= NA
chr12	80792520	80937925	80792520	80937925	-	ENST00000552864.5@LIN7A	ENST00000552864.5	protein_coding	80937641,80889251,80848251,80845730,80811465,80792520	80937925,80889369,80848322,80845939,80811683,80797726	Gene ID= ENSG00000111052.7 TPM= 5.31 Transcript Type= protein_coding
chr12	81077211	81261205	81077211	81261205	+	ENST00000548058.5@ACSS3	ENST00000548058.5	protein_coding	81077211,81109560,81134816,81139131,81143107,81151844,81152001,81174788,81199341,81216901,81220013,81231057,81233349,81253307,81253495,81254857	81078431,81109704,81135004,81139265,81143247,81151924,81152096,81174939,81199444,81216996,81220076,81231138,81233471,81253406,81253670,81261205	Gene ID= ENSG00000111058.7 TPM= 6.37 Transcript Type= protein_coding
chr12	82352306	82358788	82352306	82358788	-	ENST00000256151.7@CCDC59	ENST00000256151.7	protein_coding	82358223,82356960,82354495,82352306	82358788,82357269,82354594,82353312	Gene ID= ENSG00000133773.11 TPM= 4.25 Transcript Type= protein_coding
chr12	82352847	82358786	82352847	82358786	-	ENST00000548126.1@CCDC59	ENST00000548126.1	protein_coding	82358679,82356960,82354495,82352847	82358786,82357269,82354594,82353312	Gene ID= ENSG00000133773.11 TPM= 12.75 Transcript Type= processed_transcript
chr12	82429378	82431403	82429378	82431403	-	transcript3499.chr12.nnic@NA	transcript3499.chr12.nnic	NA	82429378	82431403	Gene ID= novel_gene_chr12_3500 TPM= 2.12 Transcript Type= NA
chr12	82686880	82986573	82686880	82986573	+	ENST00000551915.5@TMTC2	ENST00000551915.5	protein_coding	82686880,82857010,82895818,82930431,82965024,82965560,82966919,82985925	82687669,82857580,82896646,82930545,82965109,82965744,82966997,82986573	Gene ID= ENSG00000179104.8 TPM= 2.12 Transcript Type= retained_intron
chr12	85280107	85301784	85280107	85301784	+	ENST00000316824.3@ALX1	ENST00000316824.3	protein_coding	85280107,85283572,85286853,85301155	85280487,85283876,85286981,85301784	Gene ID= ENSG00000180318.3 TPM= 1.06 Transcript Type= protein_coding
chr12	85800697	85836570	85800697	85836570	-	ENST00000361228.4@RASSF9	ENST00000361228.4	protein_coding	85836155,85800697	85836570,85805962	Gene ID= ENSG00000198774.4 TPM= 8.5 Transcript Type= protein_coding
chr12	85955666	86049723	85955666	86049723	-	ENST00000611864.4@MGAT4C	ENST00000611864.4	protein_coding	86049674,85989400,85983523,85955666	86049723,85989552,85983670,85980430	Gene ID= ENSG00000182050.13 TPM= 1.06 Transcript Type= protein_coding
chr12	88035446	88050160	88035446	88050160	+	ENST00000356891.3@C12orf29	ENST00000356891.3	protein_coding	88035446,88040148,88042825,88043599,88045582,88046807,88048234	88035738,88040265,88042920,88043715,88045779,88046976,88050160	Gene ID= ENSG00000133641.17 TPM= 13.28 Transcript Type= protein_coding
chr12	88035505	88050158	88035505	88050158	+	ENST00000550333.5@C12orf29	ENST00000550333.5	protein_coding	88035505,88042825,88043599,88045582,88046807,88048234	88035738,88042920,88043715,88045779,88046976,88050158	Gene ID= ENSG00000133641.17 TPM= 7.97 Transcript Type= nonsense_mediated_decay
chr12	88049020	88142216	88049020	88142216	-	ENST00000552810.5@CEP290	ENST00000552810.5	protein_coding	88141900,88141206,88140956,88139495,88139145,88136643,88131165,88130545,88130268,88129694,88128946,88126316,88125246,88120997,88120114,88118643,88118483,88117033,88115098,88114420,88111694,88111202,88109066,88106996,88106675,88102838,88096888,88093770,88092681,88090728,88089032,88087780,88086391,88086039,88084586,88083847,88083031,88080182,88079092,88077697,88077222,88071781,88071294,88068522,88063981,88062692,88060830,88059898,88058848,88055576,88054340,88053652,88050354,88049020	88142216,88141334,88141033,88139564,88139191,88136786,88131218,88130565,88130420,88129876,88129035,88126438,88125369,88121166,88120276,88118743,88118570,88117145,88115182,88114562,88111858,88111351,88109181,88107098,88106905,88103011,88096999,88093975,88092832,88090839,88089487,88087944,88086498,88086173,88084852,88083954,88083230,88080395,88079229,88077918,88077344,88071926,88071449,88068645,88064115,88062778,88060994,88060020,88059020,88055717,88054413,88053746,88050433,88049414	Gene ID= ENSG00000198707.14 TPM= 3.19 Transcript Type= protein_coding
chr12	88142296	88199887	88142296	88199887	+	ENST00000266712.10@TMTC3	ENST00000266712.10	protein_coding	88142296,88148288,88153291,88154288,88160114,88160679,88166330,88172597,88174607,88176208,88188843,88190453,88192604,88194838	88142487,88148504,88153509,88154387,88160229,88160851,88166582,88172745,88174727,88176319,88188946,88190622,88192830,88199887	Gene ID= ENSG00000139324.11 TPM= 1.06 Transcript Type= protein_coding
chr12	89347232	89353271	89347232	89353271	-	ENST00000279488.7@DUSP6	ENST00000279488.7	protein_coding	89351640,89350588,89347232	89353271,89351025,89349561	Gene ID= ENSG00000139318.7 TPM= 20.18 Transcript Type= protein_coding
chr12	89353216	89353963	89353216	89353963	-	transcript3532.chr12.nnic@NA	transcript3532.chr12.nnic	NA	89353216	89353963	Gene ID= novel_gene_chr12_3533 TPM= 2.12 Transcript Type= NA
chr12	89419718	89525615	89419718	89525615	-	ENST00000393179.8@POC1B	ENST00000393179.8	protein_coding	89525120,89491936,89472168,89471614,89470361,89467617,89466770,89459638,89425161,89419718	89525615,89492115,89472275,89471729,89470494,89467685,89466922,89459718,89425379,89421257	Gene ID= ENSG00000139323.13 TPM= 1.06 Transcript Type= protein_coding
chr12	89419718	89526024	89419718	89526024	-	ENST00000313546.7@POC1B	ENST00000313546.7	protein_coding	89525881,89525120,89497171,89491936,89472168,89471614,89470361,89467617,89466770,89459638,89425161,89419718	89526024,89525204,89497342,89492115,89472275,89471729,89470494,89467685,89466922,89459718,89425379,89421257	Gene ID= ENSG00000139323.13 TPM= 6.37 Transcript Type= protein_coding
chr12	89521111	89524818	89521111	89524818	-	transcript3541.chr12.nnic@NA	transcript3541.chr12.nnic	NA	89521111	89524818	Gene ID= novel_gene_chr12_3542 TPM= 3.19 Transcript Type= NA
chr12	89630525	89709031	89630525	89709031	-	transcript3547.chr12.nic@ATP2B1	transcript3547.chr12.nic	protein_coding	89708596,89655679,89642158,89634997,89634778,89630525	89709031,89656107,89642355,89635251,89634903,89630645	Gene ID= ENSG00000070961.15 TPM= 17.53 Transcript Type= NA
chr12	89630525	89709363	89630525	89709363	-	transcript3548.chr12.nic@ATP2B1	transcript3548.chr12.nic	protein_coding	89709219,89655679,89642158,89634997,89634778,89630525	89709363,89656107,89642355,89635251,89634903,89630645	Gene ID= ENSG00000070961.15 TPM= 12.21 Transcript Type= NA
chr12	91102629	91111831	91102629	91111831	-	ENST00000266718.4@LUM	ENST00000266718.4	protein_coding	91111398,91108118,91102629	91111831,91109000,91104319	Gene ID= ENSG00000139329.4 TPM= 110.46 Transcript Type= protein_coding
chr12	91140484	91183123	91140484	91183123	-	ENST00000052754.9@DCN	ENST00000052754.9	protein_coding	91182655,91178342,91164605,91158296,91157075,91153096,91151654,91140484	91183123,91178585,91164717,91158509,91157188,91153189,91151792,91146252	Gene ID= ENSG00000011465.16 TPM= 9.91 Transcript Type= protein_coding
chr12	91145736	91182824	91145736	91182824	-	ENST00000552962.5@DCN	ENST00000552962.5	protein_coding	91182655,91179362,91178342,91164605,91158296,91157075,91153096,91151654,91145736	91182824,91179686,91178585,91164717,91158509,91157188,91153189,91151792,91146252	Gene ID= ENSG00000011465.16 TPM= 9.91 Transcript Type= protein_coding
chr12	91145259	91179582	91145259	91179582	-	ENST00000393155.5@DCN	ENST00000393155.5	protein_coding	91179362,91178342,91164605,91158296,91157075,91153096,91151654,91145259	91179582,91178585,91164717,91158509,91157188,91153189,91151792,91146252	Gene ID= ENSG00000011465.16 TPM= 14.16 Transcript Type= protein_coding
chr12	91984976	92141713	91984976	92141713	-	ENST00000551843.5@LINC01619	ENST00000551843.5	processed_transcript	92141651,91993370,91990288,91989097,91987556,91984976	92141713,91993529,91990362,91989193,91987643,91986697	Gene ID= ENSG00000257242.7 TPM= 1.06 Transcript Type= lincRNA
chr12	92140278	92145897	92140278	92145897	-	ENST00000256015.4@BTG1	ENST00000256015.4	protein_coding	92145388,92140278	92145897,92144447	Gene ID= ENSG00000133639.4 TPM= 160.39 Transcript Type= protein_coding
chr12	92143125	92145845	92143125	92145845	-	transcript3577.chr12.nnic@NA	transcript3577.chr12.nnic	NA	92143125	92145845	Gene ID= novel_gene_chr12_3578 TPM= 10.62 Transcript Type= NA
chr12	92781950	92929349	92781950	92929349	-	transcript3584.chr12.nic@EEA1	transcript3584.chr12.nic	protein_coding	92929043,92891629,92864860,92857431,92857275,92853915,92852912,92852175,92851111,92842465,92832512,92827912,92826166,92819308,92816200,92812980,92811279,92809017,92802404,92801600,92798892,92787867,92781950	92929349,92891721,92864987,92857485,92857340,92853954,92853025,92852296,92851266,92842581,92832850,92828061,92826285,92819511,92816400,92813093,92811434,92809156,92802734,92801701,92799086,92788049,92782135	Gene ID= ENSG00000102189.16 TPM= 4.43 Transcript Type= NA
chr12	92783386	92785041	92783386	92785041	+	transcript3593.chr12.nnic@NA	transcript3593.chr12.nnic	NA	92783386	92785041	Gene ID= novel_gene_chr12_3594 TPM= 2.12 Transcript Type= NA
chr12	93317135	93377716	93317135	93377716	-	ENST00000552835.5@AC124947.1	ENST00000552835.5	antisense_RNA	93377437,93339639,93328027,93317135	93377716,93339736,93328055,93317541	Gene ID= ENSG00000257252.5 TPM= 1.06 Transcript Type= antisense_RNA
chr12	93378550	93402301	93378550	93402301	+	ENST00000549992.5@NUDT4	ENST00000549992.5	protein_coding	93378550,93394609,93395489,93398771,93399177	93378790,93394719,93395533,93398855,93402301	Gene ID= ENSG00000173598.13 TPM= 53.64 Transcript Type= protein_coding
chr12	93377926	93381542	93377926	93381542	+	transcript3630.chr12.nnic@NA	transcript3630.chr12.nnic	NA	93377926	93381542	Gene ID= novel_gene_chr12_3631 TPM= 5.84 Transcript Type= NA
chr12	93405690	93442262	93405690	93442262	-	ENST00000318066.6@UBE2N	ENST00000318066.6	protein_coding	93441855,93411053,93410734,93405690	93442262,93411299,93410874,93410079	Gene ID= ENSG00000177889.9 TPM= 29.74 Transcript Type= protein_coding
chr12	93467488	93516213	93467488	93516213	+	ENST00000549982.5@MRPL42	ENST00000549982.5	protein_coding	93467488,93469192,93476954,93479388,93487497,93501176	93467554,93469355,93477017,93479472,93487660,93516213	Gene ID= ENSG00000198015.12 TPM= 15.93 Transcript Type= protein_coding
chr12	93467516	93501576	93467516	93501576	+	ENST00000552217.5@MRPL42	ENST00000552217.5	protein_coding	93467516,93469189,93476954,93479388,93487497,93501176	93467554,93469355,93477017,93479472,93487660,93501576	Gene ID= ENSG00000198015.12 TPM= 1.06 Transcript Type= protein_coding
chr12	93467517	93502652	93467517	93502652	+	ENST00000393128.8@MRPL42	ENST00000393128.8	protein_coding	93467517,93469192,93476954,93479388,93487497,93501185	93467554,93469355,93477017,93479472,93487660,93502652	Gene ID= ENSG00000198015.12 TPM= 18.06 Transcript Type= protein_coding
chr12	93542464	93571768	93542464	93571768	-	ENST00000500986.5@SOCS2-AS1	ENST00000500986.5	processed_transcript	93571567,93567064,93566744,93545071,93542464	93571768,93567159,93566970,93545358,93543305	Gene ID= ENSG00000246985.7 TPM= 1.06 Transcript Type= antisense_RNA
chr12	93542464	93571752	93542464	93571752	-	transcript3649.chr12.nic@SOCS2-AS1	transcript3649.chr12.nic	processed_transcript	93571567,93566744,93545071,93542464	93571752,93566970,93545358,93543305	Gene ID= ENSG00000246985.7 TPM= 2.12 Transcript Type= NA
chr12	93569814	93576745	93569814	93576745	+	ENST00000340600.6@SOCS2	ENST00000340600.6	protein_coding	93569814,93572685,93574722	93570198,93573036,93576745	Gene ID= ENSG00000120833.13 TPM= 1.59 Transcript Type= protein_coding
chr12	93571361	93576206	93571361	93576206	+	ENST00000549122.5@SOCS2	ENST00000549122.5	protein_coding	93571361,93572685,93574722	93571914,93573036,93576206	Gene ID= ENSG00000120833.13 TPM= 12.75 Transcript Type= protein_coding
chr12	93571890	93576206	93571890	93576206	+	transcript3655.chr12.nic@SOCS2	transcript3655.chr12.nic	protein_coding	93571890,93572685,93574722	93572375,93573036,93576206	Gene ID= ENSG00000120833.13 TPM= 12.75 Transcript Type= NA
chr12	93571681	93576744	93571681	93576744	+	ENST00000622746.4@SOCS2	ENST00000622746.4	protein_coding	93571681,93572685,93574722	93572186,93573036,93576744	Gene ID= ENSG00000120833.13 TPM= 3.72 Transcript Type= protein_coding
chr12	93679606	93850731	93679606	93850731	+	transcript3666.chr12.nnic@CRADD	transcript3666.chr12.nnic	protein_coding	93679606,93849970	93679811,93850731	Gene ID= ENSG00000169372.12 TPM= 2.12 Transcript Type= NA
chr12	93677375	93850736	93677375	93850736	+	ENST00000332896.7@CRADD	ENST00000332896.7	protein_coding	93677375,93678769,93849970	93677472,93679072,93850736	Gene ID= ENSG00000169372.12 TPM= 44.61 Transcript Type= protein_coding
chr12	93703980	93705164	93703980	93705164	-	transcript3669.chr12.nnic@NA	transcript3669.chr12.nnic	NA	93703980	93705164	Gene ID= novel_gene_chr12_3670 TPM= 3.19 Transcript Type= NA
chr12	93707791	93737823	93707791	93737823	-	ENST00000550287.1@AC012085.2	ENST00000550287.1	antisense_RNA	93737699,93735565,93707791	93737823,93735733,93709083	Gene ID= ENSG00000258274.1 TPM= 1.06 Transcript Type= antisense_RNA
chr12	93735377	93738787	93735377	93738787	+	transcript3667.chr12.nnic@NA	transcript3667.chr12.nnic	NA	93735377	93738787	Gene ID= novel_gene_chr12_3668 TPM= 2.12 Transcript Type= NA
chr12	93816385	93818360	93816385	93818360	-	transcript3671.chr12.nnic@NA	transcript3671.chr12.nnic	NA	93816385	93818360	Gene ID= novel_gene_chr12_3672 TPM= 2.12 Transcript Type= NA
chr12	93894745	93897718	93894745	93897718	+	transcript3673.chr12.nnic@NA	transcript3673.chr12.nnic	NA	93894745	93897718	Gene ID= novel_gene_chr12_3674 TPM= 6.37 Transcript Type= NA
chr12	94308280	94459946	94308280	94459946	-	ENST00000339839.9@CEP83	ENST00000339839.9	protein_coding	94459557,94412318,94411697,94403170,94400850,94378791,94375886,94369922,94368057,94367794,94335589,94333482,94331700,94312914,94309918,94308280	94459946,94412591,94411847,94403262,94400981,94379042,94376017,94370036,94368201,94367943,94335664,94333639,94331829,94313017,94310107,94308917	Gene ID= ENSG00000173588.14 TPM= 2.12 Transcript Type= protein_coding
chr12	94971333	95003770	94971333	95003770	-	ENST00000327772.6@NDUFA12	ENST00000327772.6	protein_coding	95003595,95002739,94994170,94971333	95003770,95002821,94994257,94971620	Gene ID= ENSG00000184752.12 TPM= 249.08 Transcript Type= protein_coding
chr12	94971336	95003713	94971336	95003713	-	ENST00000547986.5@NDUFA12	ENST00000547986.5	protein_coding	95003595,95002739,94971336	95003713,95002821,94971620	Gene ID= ENSG00000184752.12 TPM= 5.84 Transcript Type= protein_coding
chr12	95021893	95073618	95021893	95073618	-	transcript3701.chr12.nic@NR2C1	transcript3701.chr12.nic	protein_coding	95073380,95067331,95062850,95062508,95059906,95058310,95057731,95057553,95051762,95049068,95040476,95031349,95028387,95025150,95021893	95073618,95067391,95062887,95062738,95059984,95058489,95057878,95057643,95051943,95049233,95040597,95031488,95028524,95025255,95022403	Gene ID= ENSG00000120798.16 TPM= 3.19 Transcript Type= NA
chr12	95020229	95073703	95020229	95073703	-	ENST00000333003.9@NR2C1	ENST00000333003.9	protein_coding	95073380,95067331,95062508,95059906,95058310,95057731,95057553,95051762,95049068,95040476,95031349,95028387,95025150,95020229	95073703,95067391,95062738,95059984,95058489,95057878,95057643,95051943,95049233,95040597,95031488,95028524,95025255,95022403	Gene ID= ENSG00000120798.16 TPM= 3.19 Transcript Type= protein_coding
chr12	95021893	95073618	95021893	95073618	-	transcript3705.chr12.nic@NR2C1	transcript3705.chr12.nic	protein_coding	95073380,95067331,95062508,95059906,95057731,95057553,95051762,95049068,95040476,95031349,95028387,95025150,95021893	95073618,95067391,95062738,95059984,95058489,95057643,95051943,95049233,95040597,95031488,95028524,95025255,95022403	Gene ID= ENSG00000120798.16 TPM= 5.31 Transcript Type= NA
chr12	95076749	95217464	95076749	95217464	-	ENST00000343958.8@FGD6	ENST00000343958.8	protein_coding	95217225,95208843,95172600,95152926,95152811,95141388,95137522,95134739,95113651,95108503,95108348,95107563,95106954,95105007,95094592,95092699,95091707,95089569,95085780,95084498,95076749	95217464,95211267,95172744,95152993,95152841,95141539,95137678,95134826,95113701,95108561,95108419,95107631,95107037,95105086,95094694,95092845,95091809,95089696,95085908,95084646,95081556	Gene ID= ENSG00000180263.13 TPM= 4.25 Transcript Type= protein_coding
chr12	95217746	95301172	95217746	95301172	+	transcript3720.chr12.nic@VEZT	transcript3720.chr12.nic	protein_coding	95217746,95251940,95257150,95262906,95266357,95270051,95274742,95282313,95287664,95294272,95296051,95298862,95300165	95217886,95252071,95257239,95263081,95266632,95270188,95274889,95282644,95287857,95294372,95296258,95298943,95301172	Gene ID= ENSG00000028203.17 TPM= 3.72 Transcript Type= NA
chr12	95217778	95300654	95217778	95300654	+	transcript3722.chr12.nic@VEZT	transcript3722.chr12.nic	protein_coding	95217778,95224180,95251940,95257150,95262906,95266357,95270051,95274742,95282313,95287664,95294272,95296051,95300165	95217886,95224236,95252071,95257239,95263081,95266632,95270188,95274889,95282644,95287857,95294372,95296258,95300654	Gene ID= ENSG00000028203.17 TPM= 4.25 Transcript Type= NA
chr12	95217746	95302790	95217746	95302790	+	ENST00000436874.5@VEZT	ENST00000436874.5	protein_coding	95217746,95251940,95257150,95262906,95266357,95270051,95274742,95282313,95287664,95294272,95296051,95300165	95217886,95252071,95257239,95263081,95266632,95270188,95274889,95282644,95287857,95294372,95296258,95302790	Gene ID= ENSG00000028203.17 TPM= 6.37 Transcript Type= protein_coding
chr12	95217812	95301170	95217812	95301170	+	transcript3736.chr12.nic@VEZT	transcript3736.chr12.nic	protein_coding	95217812,95251940,95266357,95270039,95274742,95282313,95287664,95294272,95296051,95300165	95217886,95252071,95266632,95270188,95274889,95282644,95287857,95294372,95296258,95301170	Gene ID= ENSG00000028203.17 TPM= 2.66 Transcript Type= NA
chr12	95217818	95300654	95217818	95300654	+	ENST00000551994.5@VEZT	ENST00000551994.5	protein_coding	95217818,95251940,95257154,95262906,95266357,95270039,95274742,95282313,95287664,95294272,95296051,95300165	95217886,95252071,95257239,95263081,95266632,95270188,95274889,95282644,95287857,95294372,95296258,95300654	Gene ID= ENSG00000028203.17 TPM= 7.44 Transcript Type= nonsense_mediated_decay
chr12	95217812	95300921	95217812	95300921	+	ENST00000552660.5@VEZT	ENST00000552660.5	protein_coding	95217812,95251940,95256550,95257150,95262906,95266357,95270039,95274742,95282313,95287664,95294272,95296051,95300165	95217886,95252071,95256622,95257239,95263081,95266632,95270188,95274889,95282644,95287857,95294372,95296258,95300921	Gene ID= ENSG00000028203.17 TPM= 1.06 Transcript Type= nonsense_mediated_decay
chr12	95473951	95515839	95473951	95515839	+	ENST00000323666.9@METAP2	ENST00000323666.9	protein_coding	95473951,95476071,95483215,95485879,95494056,95494957,95496004,95504065,95511895,95512801,95513652	95474330,95476178,95483280,95485981,95494217,95495138,95496098,95504161,95511998,95512916,95515839	Gene ID= ENSG00000111142.13 TPM= 79.66 Transcript Type= protein_coding
chr12	95474162	95514326	95474162	95514326	+	ENST00000551840.5@METAP2	ENST00000551840.5	protein_coding	95474162,95476074,95483215,95485879,95494056,95494957,95496004,95504065,95511895,95512801,95513652	95474330,95476178,95483280,95485981,95494217,95495138,95496098,95504161,95511998,95512916,95514326	Gene ID= ENSG00000111142.13 TPM= 63.73 Transcript Type= protein_coding
chr12	95657807	95790758	95657807	95790758	-	ENST00000343702.8@NTN4	ENST00000343702.8	protein_coding	95790255,95786939,95737866,95713212,95710441,95683498,95682707,95670078,95665810,95657807	95790758,95787468,95738144,95713338,95710629,95683711,95682822,95670146,95665980,95659222	Gene ID= ENSG00000074527.11 TPM= 185.88 Transcript Type= protein_coding
chr12	95858928	95867053	95858928	95867053	+	ENST00000266735.9@SNRPF	ENST00000266735.9	protein_coding	95858928,95861168,95865324,95866005	95859076,95861293,95865388,95867053	Gene ID= ENSG00000139343.10 TPM= 19.12 Transcript Type= protein_coding
chr12	96000828	96035661	96000828	96035661	-	ENST00000228740.6@LTA4H	ENST00000228740.6	protein_coding	96035361,96029055,96027444,96024479,96022147,96021085,96019168,96018763,96017557,96017044,96015583,96014855,96013750,96013188,96009094,96006314,96003838,96002960,96000828	96035661,96029185,96027564,96024547,96022251,96021137,96019240,96018903,96017580,96017114,96015694,96014999,96013853,96013258,96009148,96006409,96003920,96003064,96001106	Gene ID= ENSG00000111144.9 TPM= 38.24 Transcript Type= protein_coding
chr12	96000830	96035652	96000830	96035652	-	transcript3766.chr12.nic@LTA4H	transcript3766.chr12.nic	protein_coding	96035361,96029055,96027444,96024479,96022147,96021085,96019168,96018763,96017557,96017044,96015583,96014855,96013750,96013188,96009094,96006314,96002960,96000830	96035652,96029185,96027564,96024547,96022251,96021137,96019240,96018903,96017580,96017114,96015694,96014999,96013853,96013258,96009148,96006409,96003064,96001106	Gene ID= ENSG00000111144.9 TPM= 8.5 Transcript Type= NA
chr12	96194459	96226149	96194459	96226149	+	transcript3772.chr12.nic@ELK3	transcript3772.chr12.nic	protein_coding	96194459,96223565	96194705,96226149	Gene ID= ENSG00000111145.7 TPM= 2.12 Transcript Type= NA
chr12	96194382	96269835	96194382	96269835	+	ENST00000228741.7@ELK3	ENST00000228741.7	protein_coding	96194382,96223565,96246940,96259731,96267082	96194705,96223773,96247734,96259853,96269835	Gene ID= ENSG00000111145.7 TPM= 12.75 Transcript Type= protein_coding
chr12	96397295	96400615	96397295	96400615	-	transcript3784.chr12.nnic@NA	transcript3784.chr12.nnic	NA	96397295	96400615	Gene ID= novel_gene_chr12_3785 TPM= 4.25 Transcript Type= NA
chr12	96907223	96953777	96907223	96953777	+	ENST00000266742.8@NEDD1	ENST00000266742.8	protein_coding	96907223,96907604,96909752,96912723,96917621,96919985,96934976,96936611,96937198,96940409,96942577,96943560,96944639,96945693,96951432,96951949	96907300,96907856,96909895,96912817,96917737,96920125,96935205,96936812,96937393,96940537,96942624,96943762,96944795,96945849,96951498,96953777	Gene ID= ENSG00000139350.11 TPM= 4.25 Transcript Type= protein_coding
chr12	96907224	96953351	96907224	96953351	+	ENST00000429527.6@NEDD1	ENST00000429527.6	protein_coding	96907224,96909752,96912723,96917621,96919985,96934976,96936611,96937198,96940409,96942577,96943560,96944639,96945693,96951432,96951949	96907300,96909895,96912817,96917737,96920125,96935205,96936812,96937393,96940537,96942624,96943762,96944795,96945849,96951498,96953351	Gene ID= ENSG00000139350.11 TPM= 5.31 Transcript Type= protein_coding
chr12	98453835	98457145	98453835	98457145	-	ENST00000554295.1@SLC9A7P1	ENST00000554295.1	transcribed_processed_pseudogene	98453835	98457145	Gene ID= ENSG00000227825.4 TPM= 1.06 Transcript Type= processed_transcript
chr12	98515512	98550379	98515512	98550379	+	ENST00000556029.5@TMPO	ENST00000556029.5	protein_coding	98515512,98527886,98531680,98537475,98544230,98544442,98544951,98546359,98547573	98516146,98528012,98531838,98537572,98544349,98544537,98545061,98546447,98550379	Gene ID= ENSG00000120802.13 TPM= 2.12 Transcript Type= protein_coding
chr12	98515630	98535634	98515630	98535634	+	ENST00000266732.8@TMPO	ENST00000266732.8	protein_coding	98515630,98527886,98531680,98532823	98516146,98528012,98531838,98535634	Gene ID= ENSG00000120802.13 TPM= 7.44 Transcript Type= protein_coding
chr12	98593591	98606379	98593591	98606379	+	ENST00000401722.7@SLC25A3	ENST00000401722.7	protein_coding	98593591,98593979,98595727,98597856,98598522,98599955,98601171,98601368	98593740,98594135,98595848,98598035,98598703,98600127,98601281,98606379	Gene ID= ENSG00000075415.12 TPM= 88.58 Transcript Type= protein_coding
chr12	98593686	98601708	98593686	98601708	+	transcript3815.chr12.nic@SLC25A3	transcript3815.chr12.nic	protein_coding	98593686,98595433,98597856,98598522,98599955,98601171,98601368	98594135,98595557,98598035,98598703,98600127,98601281,98601708	Gene ID= ENSG00000075415.12 TPM= 116.2 Transcript Type= NA
chr12	98593650	98601707	98593650	98601707	+	ENST00000551917.5@SLC25A3	ENST00000551917.5	protein_coding	98593650,98593979,98595433,98597856,98598522,98599955,98601171,98601368	98593740,98594135,98595557,98598035,98598703,98600127,98601281,98601707	Gene ID= ENSG00000075415.12 TPM= 663.21 Transcript Type= protein_coding
chr12	98593660	98601708	98593660	98601708	+	ENST00000552981.5@SLC25A3	ENST00000552981.5	protein_coding	98593660,98593975,98595727,98597856,98598522,98599955,98601171,98601368	98593740,98594135,98595848,98598035,98598703,98600127,98601281,98601708	Gene ID= ENSG00000075415.12 TPM= 90.97 Transcript Type= protein_coding
chr12	98613405	98645113	98613405	98645113	-	ENST00000342502.6@IKBIP	ENST00000342502.6	protein_coding	98644523,98634296,98613405	98645113,98634413,98614340	Gene ID= ENSG00000166130.14 TPM= 2.12 Transcript Type= protein_coding
chr12	98624249	98645075	98624249	98645075	-	ENST00000299157.4@IKBIP	ENST00000299157.4	protein_coding	98644523,98634296,98624249	98645075,98634413,98626766	Gene ID= ENSG00000166130.14 TPM= 3.19 Transcript Type= protein_coding
chr12	98613405	98644954	98613405	98644954	-	ENST00000393042.3@IKBIP	ENST00000393042.3	protein_coding	98644523,98613405	98644954,98614340	Gene ID= ENSG00000166130.14 TPM= 1.06 Transcript Type= protein_coding
chr12	100057572	100142874	100057572	100142874	-	transcript3829.chr12.nic@UHRF1BP1L	transcript3829.chr12.nic	protein_coding	100142592,100108386,100103913,100102766,100098352,100097365,100095667,100088915,100086275,100084476,100083016,100072672,100059850,100058029,100057572	100142874,100108548,100103951,100102857,100098541,100097505,100095837,100089095,100086358,100084658,100083134,100072813,100060043,100059533,100057746	Gene ID= ENSG00000111647.12 TPM= 8.5 Transcript Type= NA
chr12	100069908	100142847	100069908	100142847	-	ENST00000356828.7@UHRF1BP1L	ENST00000356828.7	protein_coding	100142592,100108386,100103913,100102766,100098352,100097365,100095667,100088915,100086275,100084476,100083016,100072672,100069908	100142847,100108548,100103951,100102857,100098541,100097505,100095837,100089095,100086358,100084658,100083134,100072813,100070169	Gene ID= ENSG00000111647.12 TPM= 2.12 Transcript Type= protein_coding
chr12	100032325	100034074	100032325	100034074	-	ENST00000623268.1@AC126474.2	ENST00000623268.1	TEC	100032325	100034074	Gene ID= ENSG00000280088.1 TPM= 1.06 Transcript Type= TEC
chr12	100200087	100224423	100200087	100224423	+	ENST00000188312.6@ACTR6	ENST00000188312.6	protein_coding	100200087,100204940,100205676,100207663,100210073,100210295,100212256,100212450,100218415,100220008,100223786	100200919,100205057,100205744,100207786,100210208,100210351,100212354,100212528,100218586,100220146,100224423	Gene ID= ENSG00000075089.9 TPM= 16.99 Transcript Type= protein_coding
chr12	100200830	100224421	100200830	100224421	+	ENST00000552376.5@ACTR6	ENST00000552376.5	protein_coding	100200830,100204940,100205676,100207663,100210073,100210295,100212256,100212450,100218415,100220068,100223786	100200919,100205057,100205744,100207786,100210208,100210351,100212354,100212528,100218586,100220146,100224421	Gene ID= ENSG00000075089.9 TPM= 1.06 Transcript Type= protein_coding
chr12	100200817	100224423	100200817	100224423	+	ENST00000548180.5@ACTR6	ENST00000548180.5	protein_coding	100200817,100204940,100205676,100207663,100210073,100210295,100212256,100212450,100218415,100220008,100223786	100200919,100205057,100205757,100207786,100210208,100210351,100212354,100212528,100218586,100220146,100224423	Gene ID= ENSG00000075089.9 TPM= 2.12 Transcript Type= nonsense_mediated_decay
chr12	100267246	100340139	100267246	100340139	+	ENST00000635101.1@SCYL2	ENST00000635101.1	protein_coding	100267246,100282943,100291503,100298031,100311044,100312432,100313422,100314489,100315558,100317681,100317803,100323525,100326622,100329201,100334166,100335625,100335811,100337387,100338528	100267396,100283147,100291660,100298175,100311193,100312653,100313538,100314614,100315734,100317692,100317925,100323638,100326754,100329319,100334266,100335691,100335906,100337506,100340139	Gene ID= ENSG00000136021.18 TPM= 12.75 Transcript Type= protein_coding
chr12	100267384	100341724	100267384	100341724	+	ENST00000360820.6@SCYL2	ENST00000360820.6	protein_coding	100267384,100282943,100291503,100298031,100311044,100312432,100313422,100314489,100315558,100317803,100323525,100326622,100329201,100334166,100335625,100335811,100337387,100338528	100267792,100283147,100291660,100298175,100311193,100312653,100313538,100314614,100315734,100317925,100323638,100326754,100329319,100334266,100335691,100335906,100337506,100341724	Gene ID= ENSG00000136021.18 TPM= 6.37 Transcript Type= protein_coding
chr12	101280109	101386616	101280109	101386616	+	ENST00000261637.4@UTP20	ENST00000261637.4	protein_coding	101280109,101281116,101285570,101285749,101286321,101288960,101290137,101290733,101291742,101291970,101293168,101295480,101299682,101299973,101302448,101305915,101306699,101308185,101309763,101311719,101312036,101317478,101319545,101320852,101321504,101327081,101329241,101333301,101334425,101338051,101338813,101340523,101342446,101342787,101342941,101344595,101345554,101346451,101352055,101353047,101354832,101356554,101356926,101361962,101363576,101365459,101366558,101367860,101369721,101370432,101371058,101372884,101373401,101373585,101374808,101375624,101379371,101381140,101383041,101383543,101385583,101385968	101280327,101281196,101285636,101285881,101286509,101289041,101290274,101290888,101291888,101292104,101293245,101295658,101299837,101300061,101302553,101306065,101306761,101308343,101309839,101311798,101312276,101317663,101319635,101320937,101321629,101327247,101329449,101333444,101334504,101338277,101338957,101340610,101342589,101342837,101343093,101344750,101345694,101346588,101352194,101353129,101355118,101356693,101357082,101362060,101363743,101365625,101366699,101367976,101369891,101370563,101371168,101372963,101373470,101373767,101374939,101375756,101379558,101381211,101383313,101383669,101385728,101386616	Gene ID= ENSG00000120800.4 TPM= 1.06 Transcript Type= protein_coding
chr12	101393120	101407820	101393120	101407820	-	ENST00000261636.12@ARL1	ENST00000261636.12	protein_coding	101407642,101405844,101402865,101401062,101396399,101393120	101407820,101405981,101402946,101401173,101396577,101395670	Gene ID= ENSG00000120805.13 TPM= 59.48 Transcript Type= protein_coding
chr12	101594971	101685876	101594971	101685876	+	ENST00000361685.6@MYBPC1	ENST00000361685.6	protein_coding	101594971,101614496,101617202,101626872,101627769,101629434,101631571,101632021,101634554,101636672,101642419,101644664,101646763,101648045,101649260,101651231,101652678,101653115,101659672,101661158,101662358,101663426,101667732,101670321,101673427,101675292,101677235,101678102,101680343,101684382,101685582	101595095,101614531,101617243,101626910,101627804,101629544,101631719,101632138,101634605,101636728,101642585,101644796,101646887,101648150,101649426,101651393,101652784,101653248,101659831,101661262,101662546,101663560,101667899,101670409,101673622,101675431,101677394,101678238,101680529,101684424,101685876	Gene ID= ENSG00000196091.13 TPM= 1.06 Transcript Type= protein_coding
chr12	101594969	101685811	101594969	101685811	+	transcript3863.chr12.nic@MYBPC1	transcript3863.chr12.nic	protein_coding	101594969,101614496,101617202,101626872,101627769,101629434,101631571,101632021,101634554,101636672,101642419,101644664,101646763,101648045,101649260,101651231,101652678,101653115,101659672,101661158,101662358,101663426,101667732,101670321,101673427,101675292,101677235,101678102,101680343,101685582	101595095,101614531,101617243,101626910,101627804,101629544,101631719,101632138,101634605,101636728,101642585,101644796,101646887,101648150,101649426,101651393,101652784,101653248,101659831,101661262,101662546,101663560,101667899,101670409,101673622,101675431,101677394,101678238,101680529,101685811	Gene ID= ENSG00000196091.13 TPM= 2.12 Transcript Type= NA
chr12	101594996	101685870	101594996	101685870	+	ENST00000361466.6@MYBPC1	ENST00000361466.6	protein_coding	101594996,101614496,101617202,101626872,101627769,101629434,101631571,101632021,101634554,101636672,101642419,101644664,101646763,101648045,101649260,101651231,101652678,101653115,101659672,101661158,101662358,101663426,101667732,101670321,101673427,101675292,101677235,101678102,101680343,101682604,101684382,101685582	101595095,101614531,101617243,101626910,101627804,101629544,101631719,101632138,101634605,101636728,101642585,101644796,101646887,101648150,101649426,101651393,101652784,101653248,101659831,101661262,101662546,101663560,101667899,101670409,101673622,101675431,101677394,101678238,101680529,101682662,101684424,101685870	Gene ID= ENSG00000196091.13 TPM= 1.06 Transcript Type= protein_coding
chr12	101697626	101729065	101697626	101729065	+	transcript3871.chr12.nnic@CHPT1	transcript3871.chr12.nnic	protein_coding	101697626,101714090,101714504,101716728,101720123,101723168,101723722,101726294,101728901	101698134,101714237,101714645,101716812,101720254,101723326,101723847,101726497,101729065	Gene ID= ENSG00000111666.10 TPM= 40.36 Transcript Type= NA
chr12	101697627	101729074	101697627	101729074	+	ENST00000229266.7@CHPT1	ENST00000229266.7	protein_coding	101697627,101714090,101714504,101716728,101720123,101723168,101723722,101726294,101728901	101698134,101714237,101714645,101716812,101720254,101723326,101723847,101726404,101729074	Gene ID= ENSG00000111666.10 TPM= 220.93 Transcript Type= protein_coding
chr12	101697672	101727039	101697672	101727039	+	ENST00000549872.5@CHPT1	ENST00000549872.5	protein_coding	101697672,101714090,101714504,101716728,101720123,101723168,101723722,101726294	101698134,101714237,101714645,101716812,101720254,101723326,101723847,101727039	Gene ID= ENSG00000111666.10 TPM= 10.62 Transcript Type= protein_coding
chr12	101697692	101729016	101697692	101729016	+	ENST00000549128.5@CHPT1	ENST00000549128.5	protein_coding	101697692,101714090,101714504,101716728,101720123,101723168,101723722,101726294,101728908	101698134,101714237,101714645,101716812,101720254,101723326,101723847,101726501,101729016	Gene ID= ENSG00000111666.10 TPM= 11.68 Transcript Type= nonsense_mediated_decay
chr12	101735873	101737232	101735873	101737232	-	transcript3905.chr12.nnic@NA	transcript3905.chr12.nnic	NA	101735873	101737232	Gene ID= novel_gene_chr12_3906 TPM= 4.25 Transcript Type= NA
chr12	101756215	101830867	101756215	101830867	-	transcript3895.chr12.nic@GNPTAB	transcript3895.chr12.nic	protein_coding	101830559,101796677,101789938,101788548,101786012,101780557,101780152,101770996,101770406,101770021,101768037,101766091,101764202,101761564,101761127,101760030,101757572,101757212,101756215	101830867,101796762,101790057,101788589,101786217,101780621,101780286,101771157,101770585,101770191,101768160,101766294,101765304,101761763,101761346,101760143,101757657,101757310,101756566	Gene ID= ENSG00000111670.14 TPM= 5.52 Transcript Type= NA
chr12	101765761	101830980	101765761	101830980	-	transcript3899.chr12.nic@GNPTAB	transcript3899.chr12.nic	protein_coding	101830559,101796677,101789938,101788548,101786012,101780557,101780152,101770996,101770406,101770021,101768037,101765761	101830980,101796762,101790057,101788589,101786217,101780621,101780286,101771157,101770585,101770191,101768160,101766294	Gene ID= ENSG00000111670.14 TPM= 12.96 Transcript Type= NA
chr12	101780118	101830980	101780118	101830980	-	transcript3901.chr12.nic@GNPTAB	transcript3901.chr12.nic	protein_coding	101830559,101796677,101789938,101788548,101786012,101780557,101780118	101830980,101796762,101790057,101788589,101786217,101780621,101780286	Gene ID= ENSG00000111670.14 TPM= 2.34 Transcript Type= NA
chr12	101745497	101830938	101745497	101830938	-	ENST00000299314.11@GNPTAB	ENST00000299314.11	protein_coding	101830559,101796677,101789938,101788548,101786012,101780557,101780152,101770996,101770406,101770021,101768037,101766091,101764202,101761564,101761127,101760030,101757572,101757212,101753372,101749101,101745497	101830938,101796762,101790057,101788589,101786217,101780621,101780286,101771157,101770585,101770191,101768160,101766294,101765304,101761763,101761346,101760143,101757657,101757310,101753539,101749191,101747241	Gene ID= ENSG00000111670.14 TPM= 14.02 Transcript Type= protein_coding
chr12	101877351	101923623	101877351	101923623	+	ENST00000258534.12@DRAM1	ENST00000258534.12	protein_coding	101877351,101897863,101901291,101908186,101914174,101920109,101921216	101877920,101897930,101901433,101908363,101914232,101920201,101923623	Gene ID= ENSG00000136048.13 TPM= 16.99 Transcript Type= protein_coding
chr12	102012939	102062124	102012939	102062124	-	ENST00000240079.10@WASHC3	ENST00000240079.10	protein_coding	102061912,102061248,102046054,102044105,102039868,102025974,102012939	102062124,102061346,102046119,102044212,102039978,102026038,102013192	Gene ID= ENSG00000120860.10 TPM= 52.05 Transcript Type= protein_coding
chr12	102012942	102062079	102012942	102062079	-	ENST00000545679.5@WASHC3	ENST00000545679.5	protein_coding	102061912,102061248,102046054,102044105,102039868,102025974,102012942	102062079,102061346,102046119,102044212,102039975,102026038,102013192	Gene ID= ENSG00000120860.10 TPM= 7.44 Transcript Type= protein_coding
chr12	102012944	102062034	102012944	102062034	-	ENST00000535501.5@WASHC3	ENST00000535501.5	protein_coding	102061912,102061248,102050189,102046054,102044105,102039868,102025974,102012944	102062034,102061346,102050291,102046119,102044212,102039975,102026038,102013192	Gene ID= ENSG00000120860.10 TPM= 2.12 Transcript Type= nonsense_mediated_decay
chr12	102074197	102118583	102074197	102118583	-	ENST00000251074.5@NUP37	ENST00000251074.5	protein_coding	102118363,102112108,102101032,102099106,102085766,102077322,102076797,102075001,102074197	102118583,102112232,102101104,102099200,102085856,102077503,102076847,102075094,102074467	Gene ID= ENSG00000075188.8 TPM= 1.06 Transcript Type= protein_coding
chr12	102395874	102480645	102395874	102480645	-	ENST00000337514.10@IGF1	ENST00000337514.10	protein_coding	102480319,102475643,102419509,102395874	102480645,102475799,102419690,102402566	Gene ID= ENSG00000017427.15 TPM= 3.19 Transcript Type= protein_coding
chr12	102417491	102480563	102417491	102480563	-	ENST00000307046.8@IGF1	ENST00000307046.8	protein_coding	102480319,102475643,102419509,102417491	102480563,102475799,102419690,102418003	Gene ID= ENSG00000017427.15 TPM= 2.12 Transcript Type= protein_coding
chr12	103847968	103848792	103847968	103848792	+	transcript3928.chr12.nnic@NA	transcript3928.chr12.nnic	NA	103847968	103848792	Gene ID= novel_gene_chr12_3929 TPM= 2.12 Transcript Type= NA
chr12	103930334	103947926	103930334	103947926	+	ENST00000299767.9@HSP90B1	ENST00000299767.9	protein_coding	103930334,103931521,103932277,103932826,103933956,103937695,103938340,103939509,103941410,103941629,103941832,103942527,103943074,103943738,103946618,103946786,103947311,103947633	103930564,103931623,103932418,103932942,103934287,103937806,103938459,103939625,103941547,103941706,103941897,103942796,103943319,103943874,103946696,103946941,103947430,103947926	Gene ID= ENSG00000166598.14 TPM= 412.79 Transcript Type= protein_coding
chr12	103930334	103938779	103930334	103938779	+	ENST00000640977.1@HSP90B1	ENST00000640977.1	protein_coding	103930334,103931521,103932277,103932826,103933956,103937695,103938340,103938773	103930564,103931623,103932418,103932942,103934287,103937806,103938422,103938779	Gene ID= ENSG00000166598.14 TPM= 112.34 Transcript Type= protein_coding
chr12	103950207	103957264	103950207	103957264	-	ENST00000378090.8@C12orf73	ENST00000378090.8	protein_coding	103957069,103956631,103950207	103957264,103956748,103951630	Gene ID= ENSG00000204954.9 TPM= 2.12 Transcript Type= protein_coding
chr12	103950745	103957190	103950745	103957190	-	ENST00000549478.1@C12orf73	ENST00000549478.1	protein_coding	103956631,103950745	103957190,103951630	Gene ID= ENSG00000204954.9 TPM= 1.06 Transcript Type= protein_coding
chr12	103965516	103965696	103965516	103965696	-	transcript3950.chr12.nnic@NA	transcript3950.chr12.nnic	NA	103965516	103965696	Gene ID= novel_gene_chr12_3951 TPM= 2.12 Transcript Type= NA
chr12	103965804	103988874	103965804	103988874	+	ENST00000392872.7@TDG	ENST00000392872.7	protein_coding	103965804,103976918,103979831,103980893,103982799,103983136,103983295,103984749,103985603,103986948	103966060,103977060,103980072,103980962,103982934,103983218,103983389,103984920,103985728,103988874	Gene ID= ENSG00000139372.14 TPM= 8.5 Transcript Type= protein_coding
chr12	103973088	103974536	103973088	103974536	-	transcript3956.chr12.nnic@NA	transcript3956.chr12.nnic	NA	103973088	103974536	Gene ID= novel_gene_chr12_3957 TPM= 2.12 Transcript Type= NA
chr12	104064457	104106524	104064457	104106524	+	ENST00000229330.8@HCFC2	ENST00000229330.8	protein_coding	104064457,104066167,104067947,104079445,104080746,104082500,104082713,104086847,104087986,104093386,104095360,104096360,104098343,104101968,104102959	104064723,104066315,104068107,104079653,104080830,104082606,104082901,104087014,104088038,104093563,104095563,104096433,104098480,104102153,104106524	Gene ID= ENSG00000111727.11 TPM= 5.31 Transcript Type= protein_coding
chr12	104105581	104110175	104105581	104110175	-	transcript3963.chr12.nnic@NA	transcript3963.chr12.nnic	NA	104105581	104110175	Gene ID= novel_gene_chr12_3964 TPM= 3.19 Transcript Type= NA
chr12	104117784	104138090	104117784	104138090	-	transcript3972.chr12.nnic@NFYB	transcript3972.chr12.nnic	protein_coding	104137345,104135448,104128424,104126114,104123226,104121240,104120400,104117784	104138090,104135532,104128517,104126244,104123423,104121321,104120479,104119769	Gene ID= ENSG00000120837.7 TPM= 3.19 Transcript Type= NA
chr12	104117077	104138289	104117077	104138289	-	ENST00000240055.7@NFYB	ENST00000240055.7	protein_coding	104138141,104135448,104128424,104126114,104123226,104121240,104120400,104117077	104138289,104135532,104128517,104126244,104123423,104121321,104120479,104119769	Gene ID= ENSG00000120837.7 TPM= 3.19 Transcript Type= protein_coding
chr12	104119355	104138017	104119355	104138017	-	ENST00000551727.5@NFYB	ENST00000551727.5	protein_coding	104137376,104135448,104128424,104126114,104123226,104121240,104120400,104119355	104138017,104135532,104128517,104126244,104123423,104121321,104120479,104119769	Gene ID= ENSG00000120837.7 TPM= 15.93 Transcript Type= protein_coding
chr12	104286982	104350283	104286982	104350283	+	transcript4001.chr12.nnic@TXNRD1	transcript4001.chr12.nnic	protein_coding	104286982,104311290,104313245,104315777,104318913,104319470,104321091,104325337,104326347,104327515,104331534,104334237,104339139,104346042,104348353	104287109,104311412,104313317,104315896,104319055,104319585,104321316,104325429,104326423,104327671,104331641,104334332,104339273,104346155,104350283	Gene ID= ENSG00000198431.15 TPM= 4.07 Transcript Type= NA
chr12	104286881	104350283	104286881	104350283	+	ENST00000526691.5@TXNRD1	ENST00000526691.5	protein_coding	104286881,104288931,104311290,104313245,104315777,104318913,104319470,104321091,104325337,104326347,104327515,104331534,104334237,104339139,104348353	104287346,104289040,104311412,104313317,104315896,104319055,104319585,104321316,104325429,104326423,104327671,104331641,104334332,104339273,104350283	Gene ID= ENSG00000198431.15 TPM= 12.13 Transcript Type= protein_coding
chr12	104288718	104350283	104288718	104350283	+	ENST00000527688.5@TXNRD1	ENST00000527688.5	protein_coding	104288718,104311290,104313245,104315777,104318913,104319470,104321091,104325337,104326347,104327515,104331534,104334237,104339139,104346019,104348353	104289040,104311412,104313317,104315896,104319055,104319585,104321316,104325429,104326423,104327671,104331641,104334332,104339273,104346155,104350283	Gene ID= ENSG00000198431.15 TPM= 3.37 Transcript Type= nonsense_mediated_decay
chr12	104286982	104350283	104286982	104350283	+	transcript4005.chr12.nic@TXNRD1	transcript4005.chr12.nic	protein_coding	104286982,104311290,104313245,104315777,104318913,104319470,104321091,104325337,104326347,104327515,104331534,104334237,104339139,104348353	104287109,104311412,104313317,104315896,104319055,104319585,104321316,104325429,104326423,104327671,104331641,104334332,104339273,104350283	Gene ID= ENSG00000198431.15 TPM= 11.24 Transcript Type= NA
chr12	104286982	104350283	104286982	104350283	+	transcript4006.chr12.nic@TXNRD1	transcript4006.chr12.nic	protein_coding	104286982,104311290,104313245,104315777,104318913,104319470,104321091,104325337,104326347,104327515,104331534,104334237,104339139,104348353	104287346,104311412,104313317,104315896,104319055,104319585,104321316,104325429,104326423,104327671,104331641,104334332,104339273,104350283	Gene ID= ENSG00000198431.15 TPM= 10.18 Transcript Type= NA
chr12	104288922	104350283	104288922	104350283	+	transcript4007.chr12.nic@TXNRD1	transcript4007.chr12.nic	protein_coding	104288922,104311290,104313245,104315777,104318913,104319470,104321091,104325337,104326347,104327515,104331534,104334237,104339139,104348353	104289040,104311412,104313317,104315896,104319055,104319585,104321316,104325429,104326423,104327671,104331641,104334332,104339273,104350283	Gene ID= ENSG00000198431.15 TPM= 12.13 Transcript Type= NA
chr12	104265309	104265836	104265309	104265836	+	ENST00000462885.1@RPL18AP3	ENST00000462885.1	processed_pseudogene	104265309	104265836	Gene ID= ENSG00000213442.5 TPM= 14.87 Transcript Type= processed_pseudogene
chr12	104302488	104304483	104302488	104304483	-	transcript4011.chr12.nnic@NA	transcript4011.chr12.nnic	NA	104302488	104304483	Gene ID= novel_gene_chr12_4012 TPM= 26.55 Transcript Type= NA
chr12	104986310	105017624	104986310	105017624	+	ENST00000552951.6@C12orf45	ENST00000552951.6	protein_coding	104986310,104988167,104991712,104994478	104986467,104988253,104991848,105017624	Gene ID= ENSG00000151131.10 TPM= 12.75 Transcript Type= protein_coding
chr12	105107715	105169130	105107715	105169130	+	ENST00000550053.5@WASHC4	ENST00000550053.5	protein_coding	105107715,105111125,105114216,105114362,105115184,105115661,105118446,105120555,105121089,105122118,105126004,105126235,105127129,105133770,105137886,105140294,105140899,105141167,105142453,105143127,105144287,105144718,105146452,105147042,105149615,105152343,105156726,105157236,105160001,105162749,105164111,105164641,105166864	105107861,105111264,105114269,105114427,105115229,105115728,105118528,105120597,105121204,105122238,105126127,105126362,105127289,105133896,105138011,105140401,105141045,105141246,105142558,105143243,105144455,105144872,105146526,105147146,105149749,105152451,105156792,105157322,105160148,105162845,105164307,105164740,105169130	Gene ID= ENSG00000136051.13 TPM= 2.66 Transcript Type= nonsense_mediated_decay
chr12	105107714	105169134	105107714	105169134	+	ENST00000332180.9@WASHC4	ENST00000332180.9	protein_coding	105107714,105111125,105114216,105114362,105115184,105115661,105118446,105120555,105121101,105122118,105126004,105126235,105127129,105133770,105137886,105140294,105140899,105141167,105142453,105143127,105144287,105144718,105146452,105147042,105149615,105152343,105156726,105157236,105160001,105162749,105164111,105164641,105166864	105107861,105111264,105114269,105114427,105115229,105115728,105118528,105120597,105121204,105122238,105126127,105126362,105127289,105133896,105138011,105140401,105141045,105141246,105142558,105143243,105144455,105144872,105146526,105147146,105149749,105152451,105156792,105157322,105160148,105162845,105164307,105164740,105169134	Gene ID= ENSG00000136051.13 TPM= 4.78 Transcript Type= protein_coding
chr12	105173296	105236238	105173296	105236238	-	ENST00000258530.7@APPL2	ENST00000258530.7	protein_coding	105235959,105229125,105217666,105217069,105211230,105208158,105207971,105207061,105203703,105199373,105197765,105195585,105195445,105195261,105189991,105189772,105188273,105177226,105176876,105176035,105173296	105236238,105229223,105217725,105217140,105211317,105208199,105208029,105207207,105203785,105199531,105197953,105195627,105195501,105195349,105190155,105189824,105188447,105177262,105177016,105176082,105174448	Gene ID= ENSG00000136044.11 TPM= 19.12 Transcript Type= protein_coding
chr12	105173297	105236134	105173297	105236134	-	transcript4040.chr12.nnic@APPL2	transcript4040.chr12.nnic	protein_coding	105235959,105229125,105217666,105217069,105211230,105208158,105207971,105207061,105203703,105199373,105197765,105195585,105195445,105195261,105189991,105189772,105188273,105177226,105176914,105176035,105173297	105236134,105229223,105217725,105217140,105211317,105208199,105208029,105207207,105203785,105199531,105197953,105195627,105195501,105195349,105190155,105189824,105188447,105177262,105177016,105176082,105174448	Gene ID= ENSG00000136044.11 TPM= 3.19 Transcript Type= NA
chr12	105229790	105236186	105229790	105236186	-	transcript4052.chr12.nnic@NA	transcript4052.chr12.nnic	NA	105229790	105236186	Gene ID= novel_gene_chr12_4053 TPM= 4.25 Transcript Type= NA
chr12	105330636	105371518	105330636	105371518	+	ENST00000443585.5@C12orf75	ENST00000443585.5	protein_coding	105330636,105348602,105365807,105366617,105367472,105370634	105330937,105348626,105365842,105366696,105367509,105371518	Gene ID= ENSG00000235162.8 TPM= 4.25 Transcript Type= protein_coding
chr12	106063340	106140033	106063340	106140033	-	ENST00000261402.6@NUAK1	ENST00000261402.6	protein_coding	106138414,106106405,106086734,106083864,106072724,106070774,106063340	106140033,106106525,106086885,106083929,106072843,106070906,106067955	Gene ID= ENSG00000074590.13 TPM= 80.72 Transcript Type= protein_coding
chr12	106126255	106127652	106126255	106127652	+	transcript4065.chr12.nnic@NA	transcript4065.chr12.nnic	NA	106126255	106127652	Gene ID= novel_gene_chr12_4066 TPM= 2.12 Transcript Type= NA
chr12	106127165	106129685	106127165	106129685	-	transcript4067.chr12.nnic@NA	transcript4067.chr12.nnic	NA	106127165	106129685	Gene ID= novel_gene_chr12_4068 TPM= 2.12 Transcript Type= NA
chr12	106139164	106143669	106139164	106143669	+	transcript4063.chr12.nnic@NA	transcript4063.chr12.nnic	NA	106139164	106143669	Gene ID= novel_gene_chr12_4064 TPM= 6.37 Transcript Type= NA
chr12	106237993	106248087	106237993	106248087	-	transcript4080.chr12.nnic@CKAP4	transcript4080.chr12.nnic	protein_coding	106247859,106247369,106237993	106248087,106247570,106240349	Gene ID= ENSG00000136026.13 TPM= 8.5 Transcript Type= NA
chr12	106237877	106247988	106237877	106247988	-	ENST00000378026.4@CKAP4	ENST00000378026.4	protein_coding	106247369,106237877	106247988,106240349	Gene ID= ENSG00000136026.13 TPM= 30.8 Transcript Type= protein_coding
chr12	106248159	106252785	106248159	106252785	+	transcript4092.chr12.nnic@AC079174.2	transcript4092.chr12.nnic	antisense_RNA	106248159,106252130	106248759,106252785	Gene ID= ENSG00000277715.1 TPM= 2.12 Transcript Type= NA
chr12	106302803	106347015	106302803	106347015	+	ENST00000299045.7@TCP11L2	ENST00000299045.7	protein_coding	106302803,106311041,106314358,106318344,106321486,106323510,106335639,106336032,106340826,106346286	106302941,106311232,106314493,106318464,106321706,106323646,106335826,106336213,106340998,106347015	Gene ID= ENSG00000166046.10 TPM= 2.12 Transcript Type= protein_coding
chr12	106302803	106330171	106302803	106330171	+	ENST00000547153.5@TCP11L2	ENST00000547153.5	protein_coding	106302803,106311041,106314358,106318344,106321486,106323510,106329330	106302941,106311232,106314493,106318464,106321706,106323646,106330171	Gene ID= ENSG00000166046.10 TPM= 1.06 Transcript Type= protein_coding
chr12	106347577	106348629	106347577	106348629	-	transcript4105.chr12.nnic@NA	transcript4105.chr12.nnic	NA	106347577	106348629	Gene ID= novel_gene_chr12_4106 TPM= 191.19 Transcript Type= NA
chr12	106357658	106510198	106357658	106510198	+	ENST00000228347.8@POLR3B	ENST00000228347.8	protein_coding	106357658,106363870,106366516,106366658,106369275,106369583,106376359,106378267,106380031,106393031,106405857,106410826,106427197,106430273,106432318,106433719,106437057,106437681,106444463,106454502,106457138,106459251,106463478,106496055,106496752,106501323,106504081,106509420	106357951,106363902,106366572,106366722,106369350,106369683,106376450,106378384,106380139,106393153,106405976,106410960,106427358,106430473,106432480,106433872,106437131,106437779,106444590,106454711,106457296,106459368,106463620,106496158,106496918,106501436,106504254,106510198	Gene ID= ENSG00000013503.9 TPM= 11.68 Transcript Type= protein_coding
chr12	106774580	106887284	106774580	106887284	+	transcript4110.chr12.nic@RIC8B	transcript4110.chr12.nic	protein_coding	106774580,106783997,106814696,106825726,106842589,106843852,106851450,106860268,106870823,106874481,106885904	106774829,106784044,106815304,106825820,106842817,106843947,106851594,106860412,106870942,106874567,106887284	Gene ID= ENSG00000111785.19 TPM= 2.12 Transcript Type= NA
chr12	106774631	106889313	106774631	106889313	+	transcript4116.chr12.nic@RIC8B	transcript4116.chr12.nic	protein_coding	106774631,106814696,106825726,106842589,106843852,106851450,106860268,106885904	106774829,106815304,106825820,106842817,106843947,106851594,106860412,106889313	Gene ID= ENSG00000111785.19 TPM= 6.37 Transcript Type= NA
chr12	106854739	106856122	106854739	106856122	-	transcript4117.chr12.nnic@NA	transcript4117.chr12.nnic	NA	106854739	106856122	Gene ID= novel_gene_chr12_4118 TPM= 3.19 Transcript Type= NA
chr12	106954029	106955497	106954029	106955497	-	ENST00000570282.1@AC007541.1	ENST00000570282.1	antisense_RNA	106954029	106955497	Gene ID= ENSG00000260329.1 TPM= 1.06 Transcript Type= antisense_RNA
chr12	106955722	106973984	106955722	106973984	+	ENST00000280756.8@TMEM263	ENST00000280756.8	protein_coding	106955722,106957082,106967111,106971105	106956065,106957149,106967180,106973984	Gene ID= ENSG00000151135.9 TPM= 12.21 Transcript Type= protein_coding
chr12	106955719	106974036	106955719	106974036	+	ENST00000548125.5@TMEM263	ENST00000548125.5	protein_coding	106955719,106967111,106971105	106956065,106967180,106974036	Gene ID= ENSG00000151135.9 TPM= 23.9 Transcript Type= protein_coding
chr12	106978266	106987100	106978266	106987100	-	transcript4131.chr12.nic@MTERF2	transcript4131.chr12.nic	protein_coding	106986969,106985115,106980621,106978266	106987100,106985225,106980713,106978771	Gene ID= ENSG00000120832.9 TPM= 2.12 Transcript Type= NA
chr12	106977291	106987166	106977291	106987166	-	ENST00000240050.8@MTERF2	ENST00000240050.8	protein_coding	106986969,106985115,106977291	106987166,106985225,106978771	Gene ID= ENSG00000120832.9 TPM= 10.62 Transcript Type= protein_coding
chr12	106977549	106987126	106977549	106987126	-	ENST00000552029.1@MTERF2	ENST00000552029.1	protein_coding	106985115,106977549	106987126,106978771	Gene ID= ENSG00000120832.9 TPM= 7.44 Transcript Type= protein_coding
chr12	107003808	107093557	107003808	107093557	-	transcript4146.chr12.nic@CRY1	transcript4146.chr12.nic	protein_coding	107092804,107022084,107003808	107093557,107022192,107005248	Gene ID= ENSG00000008405.11 TPM= 2.12 Transcript Type= NA
chr12	106991364	107093829	106991364	107093829	-	ENST00000008527.9@CRY1	ENST00000008527.9	protein_coding	107092804,107022084,107005106,107001764,107001280,106999942,106999551,106997915,106997488,106997294,106992965,106992787,106991364	107093829,107022192,107005248,107001948,107001368,107000082,106999862,106998066,106997690,106997386,106993036,106992890,106992001	Gene ID= ENSG00000008405.11 TPM= 36.11 Transcript Type= protein_coding
chr12	107685732	107713167	107685732	107713167	+	ENST00000412830.7@PWP1	ENST00000412830.7	protein_coding	107685732,107688448,107688615,107692814,107693000,107696474,107697467,107699373,107702935,107703685,107704636,107708926,107709111,107710405,107712111	107685971,107688506,107688802,107692899,107693096,107696584,107697597,107699434,107703031,107703746,107704747,107709016,107709232,107710510,107713167	Gene ID= ENSG00000136045.11 TPM= 18.06 Transcript Type= protein_coding
chr12	107732866	107761166	107732866	107761166	-	transcript4157.chr12.nic@PRDM4	transcript4157.chr12.nic	protein_coding	107760957,107760505,107756832,107753924,107751415,107746275,107744543,107743197,107742221,107740946,107739383,107732866	107761166,107760771,107756965,107754109,107752209,107746424,107744682,107743282,107742348,107741260,107739551,107734522	Gene ID= ENSG00000110851.11 TPM= 2.12 Transcript Type= NA
chr12	107732866	107761160	107732866	107761160	-	ENST00000228437.9@PRDM4	ENST00000228437.9	protein_coding	107760957,107760505,107756832,107753924,107751415,107746275,107744543,107743197,107742221,107740946,107739383,107732866	107761160,107760771,107756965,107754109,107752209,107746424,107744661,107743282,107742348,107741260,107739551,107734522	Gene ID= ENSG00000110851.11 TPM= 14.87 Transcript Type= protein_coding
chr12	108288790	108292217	108288790	108292217	-	transcript4162.chr12.nnic@NA	transcript4162.chr12.nnic	NA	108288790	108292217	Gene ID= novel_gene_chr12_4163 TPM= 3.19 Transcript Type= NA
chr12	108515185	108521210	108515185	108521210	+	ENST00000552695.5@FICD	ENST00000552695.5	protein_coding	108515185,108516915,108518400	108515361,108517273,108521210	Gene ID= ENSG00000198855.6 TPM= 19.12 Transcript Type= protein_coding
chr12	108522580	108561389	108522580	108561389	-	ENST00000228284.7@SART3	ENST00000228284.7	protein_coding	108560843,108549088,108547887,108545139,108544427,108543028,108538934,108538065,108537488,108536708,108536514,108535359,108532222,108531204,108530142,108526099,108525457,108524316,108522580	108561389,108549214,108547991,108545323,108544478,108543152,108539089,108538203,108537595,108536785,108536572,108535468,108532334,108531280,108530310,108526553,108525609,108524506,108523634	Gene ID= ENSG00000075856.11 TPM= 1.06 Transcript Type= protein_coding
chr12	108522708	108561161	108522708	108561161	-	ENST00000546728.5@SART3	ENST00000546728.5	protein_coding	108560843,108549088,108547887,108545139,108544427,108543028,108538945,108538065,108537488,108536708,108536514,108535359,108532222,108531204,108530142,108526099,108525457,108524316,108522708	108561161,108549214,108547991,108545323,108544478,108543152,108539089,108538203,108537595,108536785,108536572,108535468,108532334,108531280,108530310,108526553,108525609,108524506,108523634	Gene ID= ENSG00000075856.11 TPM= 15.93 Transcript Type= nonsense_mediated_decay
chr12	108562606	108569368	108562606	108569368	+	ENST00000392807.8@ISCU	ENST00000392807.8	protein_coding	108562606,108564060,108564279,108565321,108567190,108568831	108562736,108564155,108564392,108565431,108567268,108569368	Gene ID= ENSG00000136003.15 TPM= 25.23 Transcript Type= protein_coding
chr12	108562601	108569384	108562601	108569384	+	ENST00000311893.13@ISCU	ENST00000311893.13	protein_coding	108562601,108564279,108565321,108567190,108568831	108562736,108564392,108565431,108567268,108569384	Gene ID= ENSG00000136003.15 TPM= 675.27 Transcript Type= protein_coding
chr12	108562582	108569341	108562582	108569341	+	ENST00000545932.5@ISCU	ENST00000545932.5	protein_coding	108562582,108565321,108567190,108567658	108564392,108565431,108567268,108569341	Gene ID= ENSG00000136003.15 TPM= 2.12 Transcript Type= retained_intron
chr12	108562601	108569367	108562601	108569367	+	transcript4184.chr12.nnic@NA	transcript4184.chr12.nnic	NA	108562601	108569367	Gene ID= novel_gene_chr12_4185 TPM= 6.37 Transcript Type= NA
chr12	108589846	108598124	108589846	108598124	-	ENST00000392806.3@TMEM119	ENST00000392806.3	protein_coding	108597970,108589846	108598124,108592397	Gene ID= ENSG00000183160.8 TPM= 10.62 Transcript Type= protein_coding
chr12	108622277	108633959	108622277	108633959	-	ENST00000550948.1@SELPLG	ENST00000550948.1	protein_coding	108633740,108622277	108633959,108624312	Gene ID= ENSG00000110876.9 TPM= 8.5 Transcript Type= protein_coding
chr12	108645109	108731596	108645109	108731596	-	ENST00000261401.7@CORO1C	ENST00000261401.7	protein_coding	108731429,108701124,108678272,108662029,108658738,108657304,108654306,108652272,108648963,108648605,108645109	108731596,108701323,108678394,108662158,108658919,108657423,108654410,108652417,108649020,108648850,108647522	Gene ID= ENSG00000110880.10 TPM= 21.24 Transcript Type= protein_coding
chr12	108650661	108731527	108650661	108731527	-	transcript4190.chr12.nic@CORO1C	transcript4190.chr12.nic	protein_coding	108731429,108701124,108678272,108662029,108658738,108657304,108654306,108650661	108731527,108701323,108678394,108662158,108658919,108657423,108654410,108652417	Gene ID= ENSG00000110880.10 TPM= 2.12 Transcript Type= NA
chr12	108791919	108857590	108791919	108857590	-	ENST00000551165.5@SSH1	ENST00000551165.5	protein_coding	108857428,108852638,108823258,108818249,108817038,108811260,108809693,108807633,108806301,108805056,108802322,108800780,108799000,108791919	108857590,108852678,108823361,108818313,108817159,108811328,108809758,108807827,108806394,108805184,108802368,108800926,108799200,108792829	Gene ID= ENSG00000084112.14 TPM= 5.31 Transcript Type= protein_coding
chr12	108907741	109021240	108907741	109021240	-	ENST00000610966.4@SVOP	ENST00000610966.4	protein_coding	109020834,108983601,108978578,108977398,108972405,108960923,108945103,108940784,108938827,108937264,108934195,108922690,108919675,108918043,108915783,108907741	109021240,108983761,108978663,108977496,108972476,108961047,108945166,108940909,108938955,108937337,108934271,108922797,108919786,108918124,108915872,108912741	Gene ID= ENSG00000166111.9 TPM= 2.66 Transcript Type= protein_coding
chr12	108910885	108966493	108910885	108966493	-	transcript4204.chr12.nnic@SVOP	transcript4204.chr12.nnic	protein_coding	108966270,108960923,108945103,108940784,108938827,108937264,108934195,108922690,108919675,108918043,108915783,108910885	108966493,108961047,108945166,108940909,108938955,108937337,108934271,108922797,108919786,108918124,108915872,108912741	Gene ID= ENSG00000166111.9 TPM= 8.5 Transcript Type= NA
chr12	108910885	108966493	108910885	108966493	-	transcript4205.chr12.nnic@SVOP	transcript4205.chr12.nnic	protein_coding	108966270,108960923,108945103,108940784,108938827,108937264,108934195,108922690,108919675,108915783,108910885	108966493,108961047,108945166,108940909,108938955,108937337,108934271,108922797,108919786,108915872,108912741	Gene ID= ENSG00000166111.9 TPM= 2.66 Transcript Type= NA
chr12	109052586	109088023	109052586	109088023	+	transcript4212.chr12.nic@USP30	transcript4212.chr12.nic	protein_coding	109052586,109067524,109071612,109072305,109073438,109081334,109081933,109082663,109082843,109084953,109085667	109052761,109067627,109071710,109072350,109073532,109081393,109082019,109082743,109083062,109085073,109088023	Gene ID= ENSG00000135093.12 TPM= 9.56 Transcript Type= NA
chr12	109052586	109088026	109052586	109088026	+	ENST00000257548.9@USP30	ENST00000257548.9	protein_coding	109052586,109056682,109057926,109067524,109071612,109072305,109073438,109081334,109081933,109082663,109082843,109084953,109085667	109052761,109056791,109058108,109067627,109071710,109072350,109073532,109081393,109082019,109082743,109083062,109085073,109088026	Gene ID= ENSG00000135093.12 TPM= 11.68 Transcript Type= protein_coding
chr12	109088189	109093482	109088189	109093482	-	transcript4219.chr12.nic@ALKBH2	transcript4219.chr12.nic	protein_coding	109092507,109090009,109088189	109093482,109090207,109088512	Gene ID= ENSG00000189046.10 TPM= 2.12 Transcript Type= NA
chr12	109088197	109093459	109088197	109093459	-	ENST00000429722.2@ALKBH2	ENST00000429722.2	protein_coding	109093247,109092507,109090009,109088197	109093459,109092937,109090207,109088512	Gene ID= ENSG00000189046.10 TPM= 6.37 Transcript Type= protein_coding
chr12	109088189	109093472	109088189	109093472	-	ENST00000343075.7@ALKBH2	ENST00000343075.7	protein_coding	109093247,109092507,109090009,109088189	109093472,109092787,109090207,109088512	Gene ID= ENSG00000189046.10 TPM= 3.19 Transcript Type= protein_coding
chr12	109098118	109110975	109098118	109110975	+	ENST00000336865.6@UNG	ENST00000336865.6	protein_coding	109098118,109099189,109101902,109102839,109103433,109109829	109098638,109099284,109101999,109102927,109103611,109110975	Gene ID= ENSG00000076248.10 TPM= 58.42 Transcript Type= protein_coding
chr12	109111112	109112550	109111112	109112550	+	transcript4228.chr12.nnic@NA	transcript4228.chr12.nnic	NA	109111112	109112550	Gene ID= novel_gene_chr12_4229 TPM= 3.19 Transcript Type= NA
chr12	109116595	109268226	109116595	109268226	+	ENST00000338432.11@ACACB	ENST00000338432.11	protein_coding	109116595,109139397,109166861,109167896,109171805,109172275,109174132,109175931,109176153,109179088,109179917,109185579,109187999,109191613,109191847,109193648,109197008,109199402,109201567,109206710,109209165,109212836,109216618,109216796,109222507,109222799,109223815,109227371,109232669,109233748,109233938,109235313,109235606,109237165,109239830,109241078,109242437,109245626,109246179,109247606,109249984,109252046,109253015,109254214,109256140,109258268,109258973,109260480,109262357,109264232,109265110,109265389,109266236	109116704,109140058,109166993,109168034,109171914,109172356,109174230,109176040,109176263,109179297,109180087,109185740,109188162,109191763,109191950,109193729,109197153,109199552,109201701,109206856,109209353,109212936,109216706,109216920,109222620,109222912,109223904,109227489,109232806,109233847,109234045,109235369,109235647,109237380,109239985,109241281,109242592,109245748,109246448,109247703,109250104,109252156,109253158,109254334,109256236,109258364,109259108,109260657,109262469,109264386,109265280,109265525,109268226	Gene ID= ENSG00000076555.15 TPM= 22.31 Transcript Type= protein_coding
chr12	109145746	109147597	109145746	109147597	-	transcript4232.chr12.nnic@NA	transcript4232.chr12.nnic	NA	109145746	109147597	Gene ID= novel_gene_chr12_4233 TPM= 4.25 Transcript Type= NA
chr12	109158489	109159938	109158489	109159938	+	transcript4230.chr12.nnic@NA	transcript4230.chr12.nnic	NA	109158489	109159938	Gene ID= novel_gene_chr12_4231 TPM= 2.12 Transcript Type= NA
chr12	109264073	109266826	109264073	109266826	+	transcript4226.chr12.nnic@NA	transcript4226.chr12.nnic	NA	109264073	109266826	Gene ID= novel_gene_chr12_4227 TPM= 2.12 Transcript Type= NA
chr12	109448656	109477544	109448656	109477544	-	ENST00000228495.10@KCTD10	ENST00000228495.10	protein_coding	109477260,109469515,109460636,109457992,109457630,109456118,109448656	109477544,109469728,109460805,109458078,109457682,109456313,109451813	Gene ID= ENSG00000110906.12 TPM= 28.68 Transcript Type= protein_coding
chr12	109477402	109536705	109477402	109536705	+	ENST00000434735.6@UBE3B	ENST00000434735.6	protein_coding	109477402,109481637,109483531,109483861,109486012,109486471,109488572,109489919,109491045,109497818,109498233,109499633,109501371,109503023,109507564,109509596,109510344,109511204,109516765,109521148,109521441,109523978,109524438,109526358,109529890,109530547,109533466,109534591	109477764,109481742,109483712,109483981,109486071,109486575,109488668,109490004,109491127,109497923,109498353,109499810,109501534,109503190,109507735,109509714,109510458,109511303,109516884,109521324,109521551,109524115,109524503,109526416,109530072,109530658,109533558,109536705	Gene ID= ENSG00000151148.13 TPM= 16.46 Transcript Type= protein_coding
chr12	109477635	109490722	109477635	109490722	+	ENST00000536398.5@UBE3B	ENST00000536398.5	protein_coding	109477635,109481637,109483531,109483861,109486012,109486471,109488572,109489919,109490490	109477764,109481742,109483712,109483981,109486071,109486575,109488668,109490004,109490722	Gene ID= ENSG00000151148.13 TPM= 4.25 Transcript Type= protein_coding
chr12	109477642	109536702	109477642	109536702	+	ENST00000342494.7@UBE3B	ENST00000342494.7	protein_coding	109477642,109481637,109483531,109483861,109486012,109486471,109488572,109489919,109491045,109497818,109498233,109499633,109501371,109503023,109507564,109509596,109510344,109511204,109516765,109521148,109521441,109523978,109524438,109526358,109529890,109530547,109533466,109534591	109478109,109481742,109483712,109483981,109486071,109486575,109488668,109490004,109491127,109497923,109498353,109499810,109501534,109503190,109507735,109509714,109510458,109511303,109516884,109521324,109521551,109524115,109524503,109526416,109530072,109530658,109533558,109536702	Gene ID= ENSG00000151148.13 TPM= 21.77 Transcript Type= protein_coding
chr12	109478655	109481325	109478655	109481325	+	transcript4254.chr12.nnic@NA	transcript4254.chr12.nnic	NA	109478655	109481325	Gene ID= novel_gene_chr12_4255 TPM= 2.12 Transcript Type= NA
chr12	109553737	109573874	109553737	109573874	-	ENST00000545712.6@MMAB	ENST00000545712.6	protein_coding	109573347,109571649,109568770,109565119,109561780,109561420,109561040,109559096,109553737	109573874,109571710,109568863,109565176,109561852,109561517,109561104,109559155,109557136	Gene ID= ENSG00000139428.11 TPM= 3.19 Transcript Type= protein_coding
chr12	109556697	109559016	109556697	109559016	-	transcript4264.chr12.nnic@NA	transcript4264.chr12.nnic	NA	109556697	109559016	Gene ID= novel_gene_chr12_4265 TPM= 4.25 Transcript Type= NA
chr12	109573812	109597266	109573812	109597266	+	ENST00000228510.7@MVK	ENST00000228510.7	protein_coding	109573812,109574809,109575998,109579802,109581395,109586022,109586754,109590771,109591241,109595028,109596426	109573873,109574900,109576145,109579946,109581550,109586125,109586799,109590861,109591357,109595181,109597266	Gene ID= ENSG00000110921.13 TPM= 30.09 Transcript Type= protein_coding
chr12	109573837	109597261	109573837	109597261	+	ENST00000392727.7@MVK	ENST00000392727.7	protein_coding	109573837,109574809,109575998,109579802,109586022,109586754,109590771,109591241,109595028,109596426	109573873,109574900,109576145,109579946,109586125,109586799,109590861,109591357,109595181,109597261	Gene ID= ENSG00000110921.13 TPM= 3.54 Transcript Type= protein_coding
chr12	109574807	109597262	109574807	109597262	+	ENST00000629016.2@MVK	ENST00000629016.2	protein_coding	109574807,109575998,109586022,109586754,109590771,109591241,109595028,109596426	109574900,109576145,109586125,109586799,109590861,109591357,109595181,109597262	Gene ID= ENSG00000110921.13 TPM= 2.47 Transcript Type= protein_coding
chr12	109850946	109880540	109850946	109880540	-	transcript4277.chr12.nnic@GLTP	transcript4277.chr12.nnic	protein_coding	109880272,109858683,109857526,109855619,109852012,109850946	109880540,109858741,109857659,109855769,109852737,109851864	Gene ID= ENSG00000139433.9 TPM= 2.12 Transcript Type= NA
chr12	109850943	109880488	109850943	109880488	-	ENST00000318348.8@GLTP	ENST00000318348.8	protein_coding	109880272,109858683,109857526,109855619,109850943	109880488,109858741,109857659,109855769,109852737	Gene ID= ENSG00000139433.9 TPM= 40.36 Transcript Type= protein_coding
chr12	109900274	109953269	109900274	109953269	+	ENST00000544838.5@TCHP	ENST00000544838.5	protein_coding	109900274,109903027,109903937,109904737,109906572,109907526,109908586,109908871,109911063,109912991,109914442,109915403,109916591,109932897,109953118	109900426,109903214,109904147,109904793,109906640,109907699,109908698,109908937,109911235,109913072,109914627,109915546,109916710,109933084,109953269	Gene ID= ENSG00000139437.17 TPM= 1.06 Transcript Type= nonsense_mediated_decay
chr12	109900280	109918069	109900280	109918069	+	ENST00000405876.8@TCHP	ENST00000405876.8	protein_coding	109900280,109903027,109903937,109904737,109906572,109907526,109908586,109908871,109911063,109912991,109914442,109915403,109916591	109900426,109903214,109904147,109904793,109906640,109907699,109908698,109908937,109911235,109913072,109914627,109915546,109918069	Gene ID= ENSG00000139437.17 TPM= 20.18 Transcript Type= protein_coding
chr12	109929792	109996377	109929792	109996377	-	transcript4291.chr12.nnic@GIT2	transcript4291.chr12.nnic	protein_coding	109996173,109991627,109989690,109988963,109983608,109983373,109980952,109967458,109965526,109961613,109961278,109959847,109953092,109951212,109947256,109945260,109939165,109938380,109934022,109929792	109996377,109991760,109989802,109989068,109983694,109983503,109981046,109967503,109965577,109961685,109961375,109959958,109953234,109951316,109947504,109945349,109939247,109938568,109934085,109933190	Gene ID= ENSG00000139436.20 TPM= 15.93 Transcript Type= NA
chr12	110027028	110048555	110027028	110048555	-	ENST00000546651.3@C12orf76	ENST00000546651.3	protein_coding	110048363,110027028	110048555,110028589	Gene ID= ENSG00000174456.13 TPM= 2.12 Transcript Type= protein_coding
chr12	110041177	110048554	110041177	110048554	-	transcript4311.chr12.nic@C12orf76	transcript4311.chr12.nic	protein_coding	110048363,110041177	110048554,110042459	Gene ID= ENSG00000174456.13 TPM= 3.19 Transcript Type= NA
chr12	110124335	110218775	110124335	110218775	+	ENST00000552912.5@IFT81	ENST00000552912.5	protein_coding	110124335,110127360,110128046,110128950,110132547,110134948,110135327,110136776,110143382,110146953,110162919,110180422,110190920,110192617,110203864,110205443,110205595,110209171,110218044	110124443,110127524,110128149,110129130,110132636,110135013,110135437,110136860,110143545,110147048,110163065,110180571,110191048,110192706,110203950,110205514,110205680,110209216,110218775	Gene ID= ENSG00000122970.15 TPM= 7.44 Transcript Type= protein_coding
chr12	110124335	110169182	110124335	110169182	+	ENST00000361948.8@IFT81	ENST00000361948.8	protein_coding	110124335,110127360,110128046,110128950,110132547,110134948,110135327,110136776,110143382,110146953,110162919,110167871	110124861,110127524,110128149,110129130,110132636,110135013,110135437,110136860,110143545,110147048,110163065,110169182	Gene ID= ENSG00000122970.15 TPM= 1.06 Transcript Type= protein_coding
chr12	110124377	110218797	110124377	110218797	+	ENST00000242591.9@IFT81	ENST00000242591.9	protein_coding	110124377,110127360,110128046,110128950,110132547,110134948,110135327,110136776,110143382,110146953,110162919,110180422,110190920,110192617,110203864,110205443,110205595,110209171,110218044	110124861,110127524,110128149,110129130,110132636,110135013,110135437,110136860,110143545,110147048,110163065,110180571,110191048,110192706,110203950,110205514,110205680,110209216,110218797	Gene ID= ENSG00000122970.15 TPM= 4.25 Transcript Type= protein_coding
chr12	110281116	110351090	110281116	110351090	+	ENST00000308664.10@ATP2A2	ENST00000308664.10	protein_coding	110281116,110282604,110282713,110292020,110296599,110322992,110326390,110327553,110332597,110333181,110334012,110339281,110339503,110340659,110342228,110343232,110344886,110345249,110346001,110346201,110350292	110281907,110282621,110282795,110292124,110296737,110323072,110326475,110328017,110332685,110333283,110334143,110339403,110339721,110340994,110342448,110343434,110344971,110345382,110346118,110346321,110351090	Gene ID= ENSG00000174437.16 TPM= 483.67 Transcript Type= protein_coding
chr12	110281297	110351057	110281297	110351057	+	ENST00000377685.9@ATP2A2	ENST00000377685.9	protein_coding	110281297,110282713,110292020,110296599,110322992,110326390,110327553,110332597,110333181,110334012,110339281,110339503,110340659,110342228,110343232,110344886,110345249,110346001,110346201,110350292	110281918,110282795,110292124,110296737,110323072,110326475,110328017,110332685,110333283,110334143,110339403,110339721,110340994,110342448,110343434,110344971,110345382,110346118,110347791,110351057	Gene ID= ENSG00000174437.16 TPM= 4.34 Transcript Type= nonsense_mediated_decay
chr12	110288103	110291198	110288103	110291198	-	transcript4360.chr12.nnic@NA	transcript4360.chr12.nnic	NA	110288103	110291198	Gene ID= novel_gene_chr12_4361 TPM= 53.11 Transcript Type= NA
chr12	110334588	110339064	110334588	110339064	-	transcript4362.chr12.nnic@NA	transcript4362.chr12.nnic	NA	110334588	110339064	Gene ID= novel_gene_chr12_4363 TPM= 18.06 Transcript Type= NA
chr12	110373478	110403739	110373478	110403739	-	transcript4372.chr12.nic@ANAPC7	transcript4372.chr12.nic	protein_coding	110403527,110396266,110395101,110388512,110387739,110386327,110382843,110381752,110376066,110373478	110403739,110396452,110395220,110388623,110387892,110386469,110382960,110381948,110376216,110374333	Gene ID= ENSG00000196510.12 TPM= 10.62 Transcript Type= NA
chr12	110375477	110403730	110375477	110403730	-	ENST00000450008.2@ANAPC7	ENST00000450008.2	protein_coding	110403527,110396266,110395101,110388512,110387739,110386327,110382843,110381752,110377393,110375477	110403730,110396452,110395220,110388623,110387892,110386469,110382960,110381948,110377617,110376216	Gene ID= ENSG00000196510.12 TPM= 16.99 Transcript Type= protein_coding
chr12	110434825	110450407	110434825	110450407	-	ENST00000228825.11@ARPC3	ENST00000228825.11	protein_coding	110450255,110445452,110440312,110437084,110436557,110436110,110434825	110450407,110445551,110440388,110437152,110436683,110436204,110435217	Gene ID= ENSG00000111229.15 TPM= 75.41 Transcript Type= protein_coding
chr12	110452484	110468266	110452484	110468266	-	ENST00000228827.7@GPN3	ENST00000228827.7	protein_coding	110468156,110465106,110459695,110457510,110455815,110455586,110453743,110452484	110468266,110465214,110459862,110457634,110455930,110455682,110453871,110453096	Gene ID= ENSG00000111231.8 TPM= 7.44 Transcript Type= protein_coding
chr12	110468364	110490385	110468364	110490385	+	ENST00000377673.9@FAM216A	ENST00000377673.9	protein_coding	110468364,110473078,110485078,110486325,110486534,110487861,110490019	110469018,110473118,110485199,110486454,110486717,110487943,110490385	Gene ID= ENSG00000204856.11 TPM= 21.24 Transcript Type= protein_coding
chr12	110491523	110502099	110491523	110502099	-	ENST00000360579.11@VPS29	ENST00000360579.11	protein_coding	110502049,110499535,110496012,110492996,110491523	110502099,110499546,110496203,110493231,110492122	Gene ID= ENSG00000111237.18 TPM= 27.62 Transcript Type= protein_coding
chr12	110491625	110502078	110491625	110502078	-	ENST00000447578.6@VPS29	ENST00000447578.6	protein_coding	110502049,110498820,110496012,110492996,110491625	110502078,110498859,110496203,110493231,110492122	Gene ID= ENSG00000111237.18 TPM= 1.06 Transcript Type= protein_coding
chr12	110491886	110502111	110491886	110502111	-	ENST00000549970.5@VPS29	ENST00000549970.5	protein_coding	110502049,110499457,110496012,110492996,110491886	110502111,110499546,110496203,110493231,110492122	Gene ID= ENSG00000111237.18 TPM= 2.12 Transcript Type= protein_coding
chr12	110500754	110502109	110500754	110502109	-	transcript4402.chr12.nnic@NA	transcript4402.chr12.nnic	NA	110500754	110502109	Gene ID= novel_gene_chr12_4403 TPM= 3.19 Transcript Type= NA
chr12	110533245	110583320	110533245	110583320	-	ENST00000354300.4@PPTC7	ENST00000354300.4	protein_coding	110582809,110551789,110545880,110539822,110538144,110533245	110583320,110551968,110546078,110539945,110538273,110537095	Gene ID= ENSG00000196850.5 TPM= 38.24 Transcript Type= protein_coding
chr12	110582222	110584471	110582222	110584471	+	transcript4411.chr12.nnic@NA	transcript4411.chr12.nnic	NA	110582222	110584471	Gene ID= novel_gene_chr12_4412 TPM= 3.19 Transcript Type= NA
chr12	110614027	110649128	110614027	110649128	+	ENST00000614115.4@TCTN1	ENST00000614115.4	protein_coding	110614027,110619836,110626362,110628767,110632472,110634396,110636481,110640383,110641024,110641542,110642247,110644967,110647211,110647749,110649043	110614402,110619956,110626492,110628918,110632559,110634463,110636501,110640517,110641149,110641625,110642389,110645129,110647336,110647893,110649128	Gene ID= ENSG00000204852.15 TPM= 3.54 Transcript Type= protein_coding
chr12	110614027	110649430	110614027	110649430	+	ENST00000551590.5@TCTN1	ENST00000551590.5	protein_coding	110614027,110619836,110626362,110628767,110632472,110634670,110636481,110640383,110641024,110641542,110642249,110644967,110647211,110647749,110649043	110614402,110619956,110626492,110628918,110632559,110634779,110636501,110640517,110641149,110641627,110642389,110645129,110647336,110647893,110649430	Gene ID= ENSG00000204852.15 TPM= 7.79 Transcript Type= protein_coding
chr12	110614107	110649128	110614107	110649128	+	ENST00000495659.6@TCTN1	ENST00000495659.6	protein_coding	110614107,110619836,110626362,110628767,110632472,110634670,110636481,110640383,110641024,110641542,110642249,110644967,110647211,110647749,110649043	110614463,110619956,110626492,110628918,110632559,110634779,110636501,110640517,110641149,110641627,110642389,110645129,110647336,110647893,110649128	Gene ID= ENSG00000204852.15 TPM= 1.06 Transcript Type= nonsense_mediated_decay
chr12	110614027	110630287	110614027	110630287	+	ENST00000550703.6@TCTN1	ENST00000550703.6	protein_coding	110614027,110619836,110626362,110628767	110614402,110619956,110626492,110630287	Gene ID= ENSG00000204852.15 TPM= 2.47 Transcript Type= protein_coding
chr12	110614164	110649128	110614164	110649128	+	ENST00000397659.8@TCTN1	ENST00000397659.8	protein_coding	110614164,110619836,110626362,110628767,110632472,110634670,110636481,110640383,110641024,110641542,110642249,110644967,110647196,110647749,110649043	110614402,110619956,110626492,110628918,110632559,110634779,110636501,110640517,110641149,110641627,110642389,110645129,110647336,110647893,110649128	Gene ID= ENSG00000204852.15 TPM= 7.44 Transcript Type= protein_coding
chr12	110614113	110649128	110614113	110649128	+	ENST00000397655.7@TCTN1	ENST00000397655.7	protein_coding	110614113,110619836,110626362,110628767,110632472,110634396,110636481,110640383,110641024,110641542,110642249,110644967,110647211,110647749,110649043	110614402,110619956,110626492,110628918,110632559,110634463,110636501,110640517,110641149,110641627,110642389,110645129,110647336,110647893,110649128	Gene ID= ENSG00000204852.15 TPM= 3.19 Transcript Type= protein_coding
chr12	110648779	110689157	110648779	110689157	-	ENST00000242607.12@HVCN1	ENST00000242607.12	protein_coding	110689080,110688625,110683225,110661164,110655234,110651217,110650168,110648779	110689157,110688708,110683264,110661448,110655338,110651448,110650280,110649475	Gene ID= ENSG00000122986.13 TPM= 1.59 Transcript Type= protein_coding
chr12	110648779	110689811	110648779	110689811	-	transcript4429.chr12.nic@HVCN1	transcript4429.chr12.nic	protein_coding	110689726,110688625,110683225,110661164,110655234,110651217,110650168,110648779	110689811,110688708,110683264,110661448,110655338,110651448,110650280,110649475	Gene ID= ENSG00000122986.13 TPM= 4.78 Transcript Type= NA
chr12	110719908	110742939	110719908	110742939	-	ENST00000340766.9@PPP1CC	ENST00000340766.9	protein_coding	110742653,110731770,110730529,110724660,110722472,110722135,110721105,110719908	110742939,110731901,110730759,110724764,110722695,110722269,110721165,110720204	Gene ID= ENSG00000186298.11 TPM= 1.06 Transcript Type= protein_coding
chr12	110910819	110920577	110910819	110920577	-	ENST00000228841.12@MYL2	ENST00000228841.12	protein_coding	110920527,110919104,110915715,110914186,110913246,110913096,110910819	110920577,110919193,110915790,110914290,110913324,110913144,110911175	Gene ID= ENSG00000111245.14 TPM= 31436.75 Transcript Type= protein_coding
chr12	110918829	110920722	110918829	110920722	-	ENST00000546404.1@MYL2	ENST00000546404.1	protein_coding	110920527,110918829	110920722,110919193	Gene ID= ENSG00000111245.14 TPM= 35.05 Transcript Type= retained_intron
chr12	110936602	110937451	110936602	110937451	+	ENST00000331096.2@LINC01405	ENST00000331096.2	lincRNA	110936602,110937185	110936698,110937451	Gene ID= ENSG00000185847.7 TPM= 10.62 Transcript Type= lincRNA
chr12	111360682	111369104	111360682	111369104	-	transcript4652.chr12.nnic@FAM109A	transcript4652.chr12.nnic	protein_coding	111368912,111366113,111360682	111369104,111366257,111363463	Gene ID= ENSG00000198324.13 TPM= 30.8 Transcript Type= NA
chr12	111362719	111364777	111362719	111364777	+	transcript4654.chr12.nnic@NA	transcript4654.chr12.nnic	NA	111362719	111364777	Gene ID= novel_gene_chr12_4655 TPM= 6.37 Transcript Type= NA
chr12	111405894	111448703	111405894	111448703	+	transcript4657.chr12.nnic@SH2B3	transcript4657.chr12.nnic	protein_coding	111405894,111418108,111446753,111446942,111447125,111447330,111447656,111447983	111406266,111418877,111446854,111447033,111447219,111447544,111447827,111448703	Gene ID= ENSG00000111252.10 TPM= 2.12 Transcript Type= NA
chr12	111405880	111420391	111405880	111420391	+	transcript4662.chr12.nic@SH2B3	transcript4662.chr12.nic	protein_coding	111405880,111418119	111406277,111420391	Gene ID= ENSG00000111252.10 TPM= 5.31 Transcript Type= NA
chr12	111405948	111451623	111405948	111451623	+	ENST00000341259.6@SH2B3	ENST00000341259.6	protein_coding	111405948,111418119,111446753,111446942,111447125,111447330,111447656,111447983	111406277,111418877,111446854,111447033,111447219,111447544,111447827,111451623	Gene ID= ENSG00000111252.10 TPM= 72.23 Transcript Type= protein_coding
chr12	111452431	111599340	111452431	111599340	-	transcript4668.chr12.nic@ATXN2	transcript4668.chr12.nic	protein_coding	111598784,111555883,111554158,111552906,111552280,111525192,111520882,111519879,111518249,111516154,111513357,111510385,111509891,111509549,111488476,111486761,111485713,111485271,111470558,111470108,111457214,111456029,111453677,111452431	111599340,111555919,111554217,111552977,111552430,111525316,111520973,111520076,111518427,111516363,111513539,111510582,111509998,111509619,111488780,111486824,111485865,111485331,111470742,111470240,111457359,111456256,111453845,111452840	Gene ID= ENSG00000204842.14 TPM= 22.31 Transcript Type= NA
chr12	111642146	111685986	111642146	111685986	-	ENST00000419234.8@BRAP	ENST00000419234.8	protein_coding	111685711,111683146,111681637,111679151,111672661,111665639,111660600,111659207,111658736,111655566,111649939,111642146	111685986,111683307,111681835,111679340,111672774,111665787,111660675,111659345,111658845,111655655,111650042,111644562	Gene ID= ENSG00000089234.15 TPM= 9.56 Transcript Type= protein_coding
chr12	111686035	111757097	111686035	111757097	+	transcript4694.chr12.nnic@ACAD10	transcript4694.chr12.nnic	protein_coding	111686035,111692697,111702162,111705738,111709526,111712498,111715821,111721671,111727962,111729806,111733923,111736831,111744643,111747049,111747295,111748317,111749173,111753772,111755668,111756333	111686239,111692896,111702310,111705932,111709684,111712657,111715962,111721739,111728143,111729956,111734068,111737004,111745043,111747186,111747385,111748475,111749345,111753915,111755745,111757097	Gene ID= ENSG00000111271.14 TPM= 7.79 Transcript Type= NA
chr12	111686035	111757097	111686035	111757097	+	transcript4697.chr12.nnic@ACAD10	transcript4697.chr12.nnic	protein_coding	111686035,111692697,111702162,111705738,111709526,111712498,111715821,111721671,111727962,111736831,111744643,111746144,111747049,111747295,111748317,111749173,111753772,111755668,111756333	111686239,111692896,111702310,111705932,111709684,111712657,111715962,111721739,111728143,111737004,111745043,111746284,111747186,111747385,111748475,111749345,111753915,111755745,111757097	Gene ID= ENSG00000111271.14 TPM= 4.6 Transcript Type= NA
chr12	111686035	111706327	111686035	111706327	+	transcript4702.chr12.nic@ACAD10	transcript4702.chr12.nic	protein_coding	111686035,111692697,111702162,111705738	111686239,111692896,111702310,111706327	Gene ID= ENSG00000111271.14 TPM= 2.12 Transcript Type= NA
chr12	111686098	111757097	111686098	111757097	+	ENST00000313698.8@ACAD10	ENST00000313698.8	protein_coding	111686098,111692697,111702162,111705738,111709526,111712498,111715821,111721671,111727962,111729806,111733923,111736831,111744643,111746144,111747049,111747295,111748317,111749173,111753772,111755668,111756333	111686239,111692896,111702310,111705932,111709684,111712657,111715962,111721739,111728143,111729956,111734068,111737004,111745043,111746284,111747186,111747385,111748475,111749345,111753915,111755745,111757097	Gene ID= ENSG00000111271.14 TPM= 32.22 Transcript Type= protein_coding
chr12	111686076	111757094	111686076	111757094	+	ENST00000455480.6@ACAD10	ENST00000455480.6	protein_coding	111686076,111692697,111702162,111705738,111709526,111710273,111712498,111715821,111721671,111727962,111729806,111733923,111736831,111744643,111746144,111747049,111747295,111748317,111749173,111753772,111755668,111756333	111686239,111692896,111702310,111705932,111709684,111710365,111712657,111715962,111721739,111728143,111729956,111734068,111737004,111745043,111746284,111747186,111747385,111748475,111749345,111753915,111755745,111757094	Gene ID= ENSG00000111271.14 TPM= 4.25 Transcript Type= protein_coding
chr12	111839768	111842902	111839768	111842902	-	ENST00000456429.5@MAPKAPK5-AS1	ENST00000456429.5	lincRNA	111841327,111840333,111839768	111842902,111840477,111840003	Gene ID= ENSG00000234608.7 TPM= 5.31 Transcript Type= lincRNA
chr12	111839764	111842902	111839764	111842902	-	ENST00000428207.4@MAPKAPK5-AS1	ENST00000428207.4	lincRNA	111841327,111839764	111842902,111840477	Gene ID= ENSG00000234608.7 TPM= 6.37 Transcript Type= lincRNA
chr12	111839770	111841906	111839770	111841906	-	ENST00000442119.5@MAPKAPK5-AS1	ENST00000442119.5	lincRNA	111841684,111840333,111839770	111841906,111840477,111840003	Gene ID= ENSG00000234608.7 TPM= 6.37 Transcript Type= lincRNA
chr12	111839767	111841902	111839767	111841902	-	ENST00000443596.1@MAPKAPK5-AS1	ENST00000443596.1	lincRNA	111841684,111839767	111841902,111840477	Gene ID= ENSG00000234608.7 TPM= 3.19 Transcript Type= lincRNA
chr12	111839771	111841949	111839771	111841949	-	transcript4755.chr12.nnic@NA	transcript4755.chr12.nnic	NA	111839771	111841949	Gene ID= novel_gene_chr12_4756 TPM= 2.12 Transcript Type= NA
chr12	111841978	111902238	111841978	111902238	+	ENST00000550735.6@MAPKAPK5	ENST00000550735.6	protein_coding	111841978,111865250,111866156,111867572,111868753,111870271,111871085,111880447,111883581,111885916,111888488,111888885,111890040,111892967	111842769,111865323,111866231,111867669,111868861,111870360,111871180,111880527,111883768,111886036,111888618,111889000,111890144,111902238	Gene ID= ENSG00000089022.13 TPM= 10.62 Transcript Type= protein_coding
chr12	111842231	111893410	111842231	111893410	+	transcript4736.chr12.nnic@MAPKAPK5	transcript4736.chr12.nnic	protein_coding	111842231,111865250,111866156,111867572,111868753,111871085,111880447,111883581,111885916,111888488,111888885,111890040,111892967	111842769,111865323,111866231,111867669,111868861,111871180,111880527,111883768,111886036,111888618,111889000,111890144,111893410	Gene ID= ENSG00000089022.13 TPM= 4.25 Transcript Type= NA
chr12	111841995	111893350	111841995	111893350	+	transcript4737.chr12.nic@MAPKAPK5	transcript4737.chr12.nic	protein_coding	111841995,111865250,111866156,111867572,111870271,111871085,111880447,111883581,111885916,111888488,111888885,111890040,111892967	111842769,111865323,111866231,111867669,111870360,111871180,111880527,111883768,111886036,111888618,111889000,111890144,111893350	Gene ID= ENSG00000089022.13 TPM= 3.19 Transcript Type= NA
chr12	111884085	111887880	111884085	111887880	+	transcript4753.chr12.nnic@NA	transcript4753.chr12.nnic	NA	111884085	111887880	Gene ID= novel_gene_chr12_4754 TPM= 2.12 Transcript Type= NA
chr12	111924595	111926775	111924595	111926775	-	transcript4782.chr12.nnic@NA	transcript4782.chr12.nnic	NA	111924595	111926775	Gene ID= novel_gene_chr12_4783 TPM= 2.12 Transcript Type= NA
chr12	111931299	112006010	111931299	112006010	-	transcript4767.chr12.nic@TMEM116	transcript4767.chr12.nic	protein_coding	112005949,112005602,112005257,112003800,111991758,111943265,111938161,111937160,111936692,111933886,111932586,111931299	112006010,112005686,112005303,112003863,111991889,111943369,111938210,111937243,111936830,111934030,111932659,111931827	Gene ID= ENSG00000198270.12 TPM= 2.12 Transcript Type= NA
chr12	112010425	112013185	112010425	112013185	-	ENST00000437003.3@TMEM116	ENST00000437003.3	protein_coding	112010425	112013185	Gene ID= ENSG00000198270.12 TPM= 1.06 Transcript Type= processed_transcript
chr12	112013396	112022981	112013396	112022981	+	transcript4777.chr12.nnic@ERP29	transcript4777.chr12.nnic	protein_coding	112013396,112019756,112022150,112022717	112013609,112019894,112022663,112022981	Gene ID= ENSG00000089248.6 TPM= 2.12 Transcript Type= NA
chr12	112013316	112023451	112013316	112023451	+	ENST00000261735.3@ERP29	ENST00000261735.3	protein_coding	112013316,112019756,112022150	112013609,112019894,112023451	Gene ID= ENSG00000089248.6 TPM= 66.92 Transcript Type= protein_coding
chr12	112026689	112109022	112026689	112109022	-	ENST00000261745.8@NAA25	ENST00000261745.8	protein_coding	112108716,112093051,112090726,112087683,112081060,112078634,112078188,112075678,112074675,112071895,112068880,112061181,112060270,112054388,112053558,112048292,112047665,112043625,112043088,112042039,112040481,112039229,112033233,112026689	112109022,112093136,112090864,112087801,112081134,112078741,112078266,112075789,112074764,112072064,112068992,112061388,112060359,112054568,112053657,112048443,112047790,112043868,112043211,112042104,112040578,112039339,112033379,112029653	Gene ID= ENSG00000111300.9 TPM= 24.43 Transcript Type= protein_coding
chr12	112125501	112153609	112125501	112153609	+	ENST00000412615.6@TRAFD1	ENST00000412615.6	protein_coding	112125501,112130511,112134738,112135013,112140819,112142089,112145586,112148074,112149751,112151801,112152427,112152735	112125618,112130569,112134873,112135066,112141224,112142295,112145662,112148304,112149871,112152140,112152499,112153609	Gene ID= ENSG00000135148.11 TPM= 48.86 Transcript Type= protein_coding
chr12	112125545	112153603	112125545	112153603	+	ENST00000257604.9@TRAFD1	ENST00000257604.9	protein_coding	112125545,112130511,112134738,112135013,112140819,112142089,112145586,112148074,112149751,112151801,112152427,112152735	112126149,112130569,112134873,112135066,112141224,112142295,112145662,112148304,112149871,112152140,112152499,112153603	Gene ID= ENSG00000135148.11 TPM= 6.37 Transcript Type= protein_coding
chr12	112405203	112409596	112405203	112409596	-	ENST00000424576.6@RPL6	ENST00000424576.6	protein_coding	112409411,112408420,112408240,112406747,112406294,112405853,112405203	112409596,112408656,112408338,112406890,112406342,112406037,112405376	Gene ID= ENSG00000089009.15 TPM= 7.97 Transcript Type= protein_coding
chr12	112405199	112409641	112405199	112409641	-	ENST00000202773.13@RPL6	ENST00000202773.13	protein_coding	112409587,112408420,112408240,112406747,112406294,112405853,112405199	112409641,112408656,112408338,112406890,112406342,112406037,112405376	Gene ID= ENSG00000089009.15 TPM= 348.92 Transcript Type= protein_coding
chr12	112418884	112509913	112418884	112509913	+	transcript4796.chr12.nic@PTPN11	transcript4796.chr12.nic	protein_coding	112418884,112446276,112450318,112453195,112454564,112455950,112472944,112477651,112477857,112482074,112486463,112488443,112489024,112502144,112504695,112505825	112419125,112446398,112450512,112453387,112454680,112456063,112473040,112477730,112478015,112482205,112486629,112488510,112489175,112502256,112504796,112509913	Gene ID= ENSG00000179295.17 TPM= 15.93 Transcript Type= NA
chr12	112418884	112491287	112418884	112491287	+	transcript4804.chr12.nic@PTPN11	transcript4804.chr12.nic	protein_coding	112418884,112446276,112450318,112453195,112454564,112455950,112472944,112477651,112477857,112482074,112486475,112488443,112489024	112419125,112446398,112450512,112453387,112454680,112456063,112473040,112477730,112478015,112482205,112486629,112488510,112491287	Gene ID= ENSG00000179295.17 TPM= 3.19 Transcript Type= NA
chr12	112418914	112509913	112418914	112509913	+	ENST00000351677.6@PTPN11	ENST00000351677.6	protein_coding	112418914,112446276,112450318,112453195,112454564,112455950,112472944,112477651,112477857,112482074,112486475,112488443,112489024,112502144,112504695,112505825	112419125,112446398,112450512,112453387,112454680,112456063,112473040,112477730,112478015,112482205,112486629,112488510,112489175,112502256,112504796,112509913	Gene ID= ENSG00000179295.17 TPM= 189.06 Transcript Type= protein_coding
chr12	112906777	112919903	112906777	112919903	+	ENST00000202917.9@OAS1	ENST00000202917.9	protein_coding	112906777,112908536,112911051,112916509,112917547,112919389	112907219,112908824,112911235,112916738,112917700,112919903	Gene ID= ENSG00000089127.12 TPM= 4.25 Transcript Type= protein_coding
chr12	112978402	113011718	112978402	113011718	+	ENST00000392583.6@OAS2	ENST00000392583.6	protein_coding	112978402,112987038,112995296,112997520,112998266,113002932,113004934,113006413,113007705,113009087	112978785,112987308,112995474,112997755,112998410,113003102,113005222,113006600,113007943,113011718	Gene ID= ENSG00000111335.12 TPM= 1.06 Transcript Type= protein_coding
chr12	113057690	113098028	113057690	113098028	+	ENST00000257600.3@DTX1	ENST00000257600.3	protein_coding	113057690,113077424,113093162,113093539,113094038,113094789,113095042,113095325,113096715	113058451,113078105,113093223,113093700,113094099,113094947,113095203,113095414,113098028	Gene ID= ENSG00000135144.7 TPM= 6.37 Transcript Type= protein_coding
chr12	113158494	113185497	113158494	113185497	-	transcript4825.chr12.nnic@DDX54	transcript4825.chr12.nnic	protein_coding	113185278,113180929,113179935,113179143,113178977,113177052,113176840,113175036,113174875,113174640,113172353,113169770,113165644,113164067,113163132,113162932,113161893,113161270,113158494	113185497,113181058,113180005,113179331,113179026,113177093,113176935,113175157,113174936,113174771,113172563,113169904,113165717,113164285,113163274,113163045,113161997,113161382,113159109	Gene ID= ENSG00000123064.12 TPM= 28.68 Transcript Type= NA
chr12	113185542	113192361	113185542	113192361	+	ENST00000552495.1@RITA1	ENST00000552495.1	protein_coding	113185542,113186683,113191310	113186021,113187048,113192361	Gene ID= ENSG00000139405.15 TPM= 8.5 Transcript Type= protein_coding
chr12	113185526	113192368	113185526	113192368	+	ENST00000548278.1@RITA1	ENST00000548278.1	protein_coding	113185526,113186185,113186683,113191310	113186021,113186316,113187048,113192368	Gene ID= ENSG00000139405.15 TPM= 12.75 Transcript Type= protein_coding
chr12	113195443	113221094	113195443	113221094	-	ENST00000416617.2@IQCD	ENST00000416617.2	protein_coding	113220997,113207438,113200580,113197541,113195443	113221094,113208259,113200813,113197612,113195889	Gene ID= ENSG00000166578.9 TPM= 3.19 Transcript Type= protein_coding
chr12	113221460	113298585	113221460	113298585	+	ENST00000550785.5@TPCN1	ENST00000550785.5	protein_coding	113221460,113225244,113226728,113260368,113266180,113267843,113268742,113269757,113272658,113273232,113273569,113276919,113277240,113278189,113278772,113280151,113284581,113284718,113285889,113286987,113288163,113288758,113290128,113290952,113291609,113291874,113292934,113293269,113295960	113221626,113225336,113226964,113260492,113266356,113267956,113268872,113269845,113272692,113273290,113273668,113277035,113277364,113278237,113278835,113280195,113284637,113284771,113285961,113287094,113288234,113288847,113290243,113290998,113291677,113291958,113293073,113293349,113298585	Gene ID= ENSG00000186815.12 TPM= 52.93 Transcript Type= protein_coding
chr12	113221438	113298585	113221438	113298585	+	ENST00000335509.10@TPCN1	ENST00000335509.10	protein_coding	113221438,113226728,113260368,113266180,113267843,113268742,113269757,113272658,113273232,113273569,113276919,113277240,113278189,113278772,113280151,113284581,113284718,113285889,113286987,113288163,113288758,113290128,113290952,113291609,113291874,113292934,113293269,113295960	113221626,113226964,113260492,113266356,113267956,113268872,113269845,113272692,113273290,113273668,113277035,113277364,113278237,113278835,113280195,113284637,113284771,113285961,113287094,113288234,113288847,113290243,113290998,113291677,113291958,113293073,113293349,113298585	Gene ID= ENSG00000186815.12 TPM= 47.62 Transcript Type= protein_coding
chr12	113221469	113296128	113221469	113296128	+	transcript4845.chr12.nic@TPCN1	transcript4845.chr12.nic	protein_coding	113221469,113260368,113266180,113267843,113268742,113269757,113272658,113273232,113273569,113276919,113277240,113278189,113278772,113280151,113284581,113284718,113285889,113286987,113288163,113288758,113290128,113290952,113291609,113291874,113292934,113293269,113295960	113221626,113260492,113266356,113267956,113268872,113269845,113272692,113273290,113273668,113277035,113277364,113278237,113278835,113280195,113284637,113284771,113285961,113287094,113288234,113288847,113290243,113290998,113291677,113291958,113293073,113293349,113296128	Gene ID= ENSG00000186815.12 TPM= 3.54 Transcript Type= NA
chr12	113223437	113225894	113223437	113225894	-	transcript4864.chr12.nnic@NA	transcript4864.chr12.nnic	NA	113223437	113225894	Gene ID= novel_gene_chr12_4865 TPM= 8.5 Transcript Type= NA
chr12	113298781	113335169	113298781	113335169	-	transcript4850.chr12.nic@SLC8B1	transcript4850.chr12.nic	protein_coding	113334443,113332723,113321196,113321056,113320850,113320581,113320331,113318964,113316942,113316526,113315335,113310234,113307691,113306495,113304321,113298781	113335169,113332960,113321348,113321108,113320907,113320686,113320498,113319071,113317001,113316656,113315476,113310355,113307844,113306575,113304385,113299974	Gene ID= ENSG00000089060.11 TPM= 7.97 Transcript Type= NA
chr12	113358570	113391625	113358570	113391625	+	ENST00000280800.4@PLBD2	ENST00000280800.4	protein_coding	113358570,113369116,113372649,113374474,113374793,113380745,113384105,113384851,113385212,113386937,113387744,113388459	113358890,113369209,113372807,113374574,113375007,113380842,113384265,113384946,113385283,113387089,113387906,113391625	Gene ID= ENSG00000151176.7 TPM= 19.12 Transcript Type= protein_coding
chr12	113422237	113438276	113422237	113438276	+	ENST00000403593.8@SDSL	ENST00000403593.8	protein_coding	113422237,113427962,113428420,113429160,113434134,113435329,113436751,113437886	113422477,113428156,113428459,113429299,113434222,113435556,113436875,113438276	Gene ID= ENSG00000139410.14 TPM= 26.55 Transcript Type= protein_coding
chr12	113807059	113810224	113807059	113810224	-	transcript4875.chr12.nnic@NA	transcript4875.chr12.nnic	NA	113807059	113810224	Gene ID= novel_gene_chr12_4876 TPM= 3.19 Transcript Type= NA
chr12	113822057	113966371	113822057	113966371	-	ENST00000261741.9@RBM19	ENST00000261741.9	protein_coding	113966192,113962232,113960059,113959865,113959212,113957782,113955131,113952512,113950083,113948833,113947334,113946354,113945828,113942324,113939960,113937007,113927054,113924697,113920611,113918392,113914969,113858791,113844668,113822057	113966371,113962414,113960178,113959903,113959404,113958050,113955211,113952590,113950154,113949036,113947464,113946475,113945924,113942434,113940160,113937136,113927229,113924757,113920690,113918447,113915085,113858896,113844788,113823321	Gene ID= ENSG00000122965.10 TPM= 9.03 Transcript Type= protein_coding
chr12	113822057	113966357	113822057	113966357	-	transcript4886.chr12.nnic@RBM19	transcript4886.chr12.nnic	protein_coding	113966192,113962232,113960059,113959865,113959212,113957782,113955131,113952512,113948833,113947334,113946354,113945828,113942324,113939960,113937007,113927054,113924697,113920611,113918392,113914969,113858791,113844668,113822057	113966357,113962414,113960178,113959903,113959404,113958050,113955211,113952590,113949036,113947464,113946475,113945924,113942434,113940160,113937136,113927229,113924757,113920690,113918447,113915085,113858896,113844788,113823321	Gene ID= ENSG00000122965.10 TPM= 5.84 Transcript Type= NA
chr12	113816742	113966306	113816742	113966306	-	ENST00000545145.6@RBM19	ENST00000545145.6	protein_coding	113966192,113962232,113960059,113959865,113959212,113957782,113955131,113952512,113950083,113948833,113947334,113946354,113945828,113942324,113939960,113937007,113927054,113924697,113920611,113918392,113914969,113858791,113844668,113823209,113816742	113966306,113962414,113960178,113959903,113959404,113958050,113955211,113952590,113950154,113949036,113947464,113946475,113945924,113942434,113940160,113937136,113927229,113924757,113920690,113918447,113915085,113858896,113844788,113823321,113818186	Gene ID= ENSG00000122965.10 TPM= 12.75 Transcript Type= protein_coding
chr12	113822054	113966310	113822054	113966310	-	ENST00000392561.7@RBM19	ENST00000392561.7	protein_coding	113966192,113962232,113960059,113959865,113959212,113957782,113955131,113952512,113950083,113948833,113947334,113946354,113945828,113942324,113939960,113937007,113927054,113924697,113920611,113918392,113914969,113858791,113844668,113823209,113822054	113966310,113962414,113960178,113959903,113959404,113958050,113955211,113952590,113950154,113949036,113947464,113946475,113945924,113942434,113940160,113937136,113927229,113924757,113920690,113918447,113915085,113858896,113844788,113823321,113822646	Gene ID= ENSG00000122965.10 TPM= 16.99 Transcript Type= protein_coding
chr12	114400993	114403731	114400993	114403731	+	transcript4901.chr12.nnic@NA	transcript4901.chr12.nnic	NA	114400993	114403731	Gene ID= novel_gene_chr12_4902 TPM= 2.12 Transcript Type= NA
chr12	114408754	114412831	114408754	114412831	+	ENST00000528549.1@TBX5-AS1	ENST00000528549.1	antisense_RNA	114408754,114409466	114409007,114412831	Gene ID= ENSG00000255399.3 TPM= 20.18 Transcript Type= antisense_RNA
chr12	114670254	114684164	114670254	114684164	-	ENST00000349155.6@TBX3	ENST00000349155.6	protein_coding	114682812,114680879,114679505,114677580,114676313,114674165,114670254	114684164,114681146,114679651,114677656,114676470,114674835,114672302	Gene ID= ENSG00000135111.15 TPM= 33.99 Transcript Type= protein_coding
chr12	115302219	115337537	115302219	115337537	-	transcript4910.chr12.nnic@AC078880.4	transcript4910.chr12.nnic	lincRNA	115337403,115332177,115328045,115314184,115310716,115303775,115302219	115337537,115332303,115328120,115314287,115310900,115303968,115303014	Gene ID= ENSG00000276308.1 TPM= 2.12 Transcript Type= NA
chr12	115300754	115337537	115300754	115337537	-	transcript4911.chr12.nnic@AC078880.4	transcript4911.chr12.nnic	lincRNA	115337403,115332177,115328045,115314184,115310716,115300754	115337537,115332303,115328120,115314287,115310900,115303968	Gene ID= ENSG00000276308.1 TPM= 2.12 Transcript Type= NA
chr12	115323272	115337537	115323272	115337537	+	transcript4913.chr12.nnic@NA	transcript4913.chr12.nnic	NA	115323272,115328045,115332177,115337403	115323903,115328120,115332303,115337537	Gene ID= novel_gene_chr12_4914 TPM= 4.25 Transcript Type= NA
chr12	115325283	115337537	115325283	115337537	+	transcript4916.chr12.nnic@NA	transcript4916.chr12.nnic	NA	115325283,115332177,115337403	115328120,115332303,115337537	Gene ID= novel_gene_chr12_4917 TPM= 2.12 Transcript Type= NA
chr12	116092379	116096379	116092379	116096379	+	transcript4921.chr12.nnic@NA	transcript4921.chr12.nnic	NA	116092379	116096379	Gene ID= novel_gene_chr12_4922 TPM= 20.18 Transcript Type= NA
chr12	116273164	116274436	116273164	116274436	+	transcript4923.chr12.nnic@NA	transcript4923.chr12.nnic	NA	116273164	116274436	Gene ID= novel_gene_chr12_4924 TPM= 3.19 Transcript Type= NA
chr12	116717070	116738070	116717070	116738070	-	ENST00000547630.1@C12orf49	ENST00000547630.1	protein_coding	116737790,116720296,116719763,116717070	116738070,116720447,116719876,116717893	Gene ID= ENSG00000111412.5 TPM= 3.19 Transcript Type= nonsense_mediated_decay
chr12	116817900	116819278	116817900	116819278	-	transcript4934.chr12.nnic@NA	transcript4934.chr12.nnic	NA	116817900	116819278	Gene ID= novel_gene_chr12_4935 TPM= 2.12 Transcript Type= NA
chr12	116910953	116947754	116910953	116947754	+	transcript4944.chr12.nic@FBXW8	transcript4944.chr12.nic	protein_coding	116910953,116928023,116945364	116911355,116928127,116947754	Gene ID= ENSG00000174989.12 TPM= 2.12 Transcript Type= NA
chr12	116965927	116971832	116965927	116971832	-	transcript4947.chr12.nnic@NA	transcript4947.chr12.nnic	NA	116965927	116971832	Gene ID= novel_gene_chr12_4948 TPM= 8.5 Transcript Type= NA
chr12	117030250	117032497	117030250	117032497	+	transcript4945.chr12.nnic@NA	transcript4945.chr12.nnic	NA	117030250	117032497	Gene ID= novel_gene_chr12_4946 TPM= 5.31 Transcript Type= NA
chr12	117038924	117099469	117038924	117099469	-	ENST00000335209.11@TESC	ENST00000335209.11	protein_coding	117099225,117075271,117056806,117049019,117046777,117046559,117041947,117038924	117099469,117075340,117056886,117049158,117046838,117046666,117041994,117039210	Gene ID= ENSG00000088992.17 TPM= 27.62 Transcript Type= protein_coding
chr12	117038925	117099446	117038925	117099446	-	ENST00000541210.5@TESC	ENST00000541210.5	protein_coding	117099225,117075271,117049019,117046777,117046559,117041947,117038925	117099446,117075340,117049158,117046838,117046666,117041994,117039210	Gene ID= ENSG00000088992.17 TPM= 5.31 Transcript Type= protein_coding
chr12	117141988	117190531	117141988	117190531	-	ENST00000622495.4@FBXO21	ENST00000622495.4	protein_coding	117190218,117189227,117186477,117177520,117174651,117174205,117172471,117166898,117165485,117157873,117155791,117141988	117190531,117189362,117186571,117177641,117174797,117174341,117172607,117167077,117165617,117158063,117155948,117146277	Gene ID= ENSG00000135108.14 TPM= 84.44 Transcript Type= protein_coding
chr12	117143781	117190471	117143781	117190471	-	ENST00000427718.6@FBXO21	ENST00000427718.6	protein_coding	117190327,117190218,117189227,117186477,117177520,117174651,117174205,117172471,117166898,117165485,117157873,117155791,117143781	117190471,117190277,117189362,117186571,117177641,117174797,117174341,117172607,117167077,117165617,117158063,117155948,117146277	Gene ID= ENSG00000135108.14 TPM= 9.56 Transcript Type= protein_coding
chr12	117145068	117190456	117145068	117190456	-	ENST00000330622.9@FBXO21	ENST00000330622.9	protein_coding	117190218,117189227,117186477,117177520,117174651,117174205,117172471,117166898,117165485,117157873,117155791,117145068	117190456,117189362,117186571,117177641,117174797,117174341,117172607,117167077,117165617,117158084,117155948,117146277	Gene ID= ENSG00000135108.14 TPM= 134.36 Transcript Type= protein_coding
chr12	118035698	118061307	118035698	118061307	-	transcript4973.chr12.nic@WSB2	transcript4973.chr12.nic	protein_coding	118061036,118052310,118043133,118042841,118038288,118035698	118061307,118052478,118043377,118042972,118038388,118036510	Gene ID= ENSG00000176871.8 TPM= 5.31 Transcript Type= NA
chr12	118032907	118061190	118032907	118061190	-	ENST00000315436.7@WSB2	ENST00000315436.7	protein_coding	118061036,118052310,118043133,118042841,118038288,118036338,118035214,118034986,118032907	118061190,118052478,118043377,118042972,118038388,118036510,118035324,118035093,118034358	Gene ID= ENSG00000176871.8 TPM= 148.7 Transcript Type= protein_coding
chr12	118063593	118103948	118063593	118103948	-	ENST00000359236.9@VSIG10	ENST00000359236.9	protein_coding	118103593,118095533,118082127,118079346,118073699,118071359,118071052,118068377,118063593	118103948,118095814,118082429,118079606,118073992,118071469,118071067,118068597,118066694	Gene ID= ENSG00000176834.13 TPM= 1.06 Transcript Type= protein_coding
chr12	118101605	118103885	118101605	118103885	-	ENST00000612851.1@VSIG10	ENST00000612851.1	protein_coding	118103593,118101605	118103885,118103176	Gene ID= ENSG00000176834.13 TPM= 1.06 Transcript Type= retained_intron
chr12	118135858	118145584	118135858	118145584	+	ENST00000261313.2@PEBP1	ENST00000261313.2	protein_coding	118135858,118138039,118139451,118144586	118136344,118138148,118139551,118145584	Gene ID= ENSG00000089220.4 TPM= 1029.76 Transcript Type= protein_coding
chr12	118149801	118372945	118149801	118372945	-	ENST00000392533.7@TAOK3	ENST00000392533.7	protein_coding	118372648,118266655,118255448,118244894,118243415,118239227,118238073,118235558,118233674,118214017,118212914,118201296,118199051,118189807,118181371,118177201,118172457,118161788,118160146,118152227,118149801	118372945,118266759,118255655,118244965,118243516,118239272,118238169,118235671,118233765,118214110,118212995,118201463,118199257,118189941,118181607,118177329,118172660,118162027,118160358,118152409,118151158	Gene ID= ENSG00000135090.13 TPM= 20.18 Transcript Type= protein_coding
chr12	118150957	118190544	118150957	118190544	-	transcript4986.chr12.nic@TAOK3	transcript4986.chr12.nic	protein_coding	118190183,118189807,118181371,118177201,118172457,118161788,118160146,118152227,118150957	118190544,118189941,118181607,118177329,118172660,118162027,118160358,118152409,118151158	Gene ID= ENSG00000135090.13 TPM= 3.19 Transcript Type= NA
chr12	118150957	118190545	118150957	118190545	-	ENST00000537952.1@TAOK3	ENST00000537952.1	protein_coding	118189807,118181371,118177201,118172457,118161788,118160146,118152227,118150957	118190545,118181607,118177329,118172660,118162027,118160358,118152409,118151158	Gene ID= ENSG00000135090.13 TPM= 3.19 Transcript Type= protein_coding
chr12	118246084	118246962	118246084	118246962	+	ENST00000488803.1@AC026366.1	ENST00000488803.1	processed_pseudogene	118246084	118246962	Gene ID= ENSG00000240342.3 TPM= 6.37 Transcript Type= processed_pseudogene
chr12	118376380	118418031	118376380	118418031	+	ENST00000543473.1@SUDS3	ENST00000543473.1	protein_coding	118376380,118380162,118384012,118386114,118389927,118391126,118400659,118401759,118401983,118403412,118411073,118414335	118376833,118380231,118384067,118386185,118389946,118391282,118400754,118401820,118402004,118403517,118411157,118418031	Gene ID= ENSG00000111707.11 TPM= 9.56 Transcript Type= protein_coding
chr12	118417679	118421259	118417679	118421259	-	transcript5012.chr12.nnic@NA	transcript5012.chr12.nnic	NA	118417679	118421259	Gene ID= novel_gene_chr12_5013 TPM= 3.19 Transcript Type= NA
chr12	118430147	118430699	118430147	118430699	+	ENST00000610630.1@AC026367.2	ENST00000610630.1	lincRNA	118430147	118430699	Gene ID= ENSG00000275409.1 TPM= 1.06 Transcript Type= lincRNA
chr12	119178642	119194748	119178642	119194748	+	ENST00000281938.6@HSPB8	ENST00000281938.6	protein_coding	119178642,119187025,119193699	119179679,119187088,119194748	Gene ID= ENSG00000152137.6 TPM= 1830.63 Transcript Type= protein_coding
chr12	119178928	119196111	119178928	119196111	+	transcript5022.chr12.nnic@HSPB8	transcript5022.chr12.nnic	protein_coding	119178928,119193699	119179683,119196111	Gene ID= ENSG00000152137.6 TPM= 23.9 Transcript Type= NA
chr12	119667864	119681624	119667864	119681624	+	ENST00000541640.5@PRKAB1	ENST00000541640.5	protein_coding	119667864,119668236,119672301,119673964,119674340,119676537,119679933,119680248	119668045,119668403,119672464,119674057,119674454,119676670,119680001,119681624	Gene ID= ENSG00000111725.10 TPM= 3.72 Transcript Type= protein_coding
chr12	119667753	119681630	119667753	119681630	+	ENST00000229328.9@PRKAB1	ENST00000229328.9	protein_coding	119667753,119672301,119673964,119674340,119676537,119679933,119680248	119668403,119672464,119674057,119674454,119676670,119680001,119681630	Gene ID= ENSG00000111725.10 TPM= 28.15 Transcript Type= protein_coding
chr12	119677355	119681619	119677355	119681619	+	ENST00000542698.1@PRKAB1	ENST00000542698.1	protein_coding	119677355,119680248	119680001,119681619	Gene ID= ENSG00000111725.10 TPM= 7.44 Transcript Type= retained_intron
chr12	120095095	120116839	120095095	120116839	-	ENST00000229340.9@RAB35	ENST00000229340.9	protein_coding	120116599,120108417,120103826,120099030,120098811,120095095	120116839,120108467,120103949,120099154,120098935,120097373	Gene ID= ENSG00000111737.11 TPM= 11.68 Transcript Type= protein_coding
chr12	120116908	120118365	120116908	120118365	+	transcript5033.chr12.nnic@NA	transcript5033.chr12.nnic	NA	120116908	120118365	Gene ID= novel_gene_chr12_5034 TPM= 4.25 Transcript Type= NA
chr12	120127203	120194710	120127203	120194710	-	ENST00000300648.6@GCN1	ENST00000300648.6	protein_coding	120194680,120190298,120184824,120184112,120183569,120178852,120178625,120177684,120177447,120176143,120175746,120175162,120174071,120173653,120170169,120168208,120164646,120164336,120163070,120162847,120161880,120161490,120160142,120159825,120158460,120157849,120156912,120156461,120155592,120155241,120154970,120153744,120153213,120151145,120149922,120149606,120148167,120147052,120145262,120144923,120144639,120144306,120142824,120142507,120140859,120138695,120138323,120137901,120137545,120137206,120136502,120134533,120134291,120131926,120131185,120130646,120129276,120127203	120194710,120190400,120184887,120184243,120183677,120178950,120178759,120177752,120177555,120176217,120175874,120175212,120174169,120173826,120170321,120168300,120164721,120164495,120163259,120162971,120162058,120161583,120160255,120160023,120158615,120158030,120156992,120156604,120155719,120155430,120155040,120153909,120153407,120151391,120150043,120149720,120148346,120147272,120145330,120145061,120144835,120144448,120142941,120142722,120141023,120138856,120138415,120138044,120137814,120137319,120136732,120134726,120134405,120132022,120131333,120130753,120129494,120127974	Gene ID= ENSG00000089154.10 TPM= 9.56 Transcript Type= protein_coding
chr12	120196686	120201211	120196686	120201211	-	ENST00000392514.8@RPLP0	ENST00000392514.8	protein_coding	120201083,120200730,120199310,120199118,120198854,120198554,120197322,120196686	120201211,120200831,120199485,120199205,120199000,120198739,120197462,120196934	Gene ID= ENSG00000089157.15 TPM= 692.97 Transcript Type= protein_coding
chr12	120196702	120201107	120196702	120201107	-	ENST00000313104.9@RPLP0	ENST00000313104.9	protein_coding	120201083,120200730,120199310,120199118,120198854,120197322,120196702	120201107,120200831,120199485,120199205,120199000,120197462,120196934	Gene ID= ENSG00000089157.15 TPM= 62.93 Transcript Type= protein_coding
chr12	120196699	120201099	120196699	120201099	-	ENST00000551150.5@RPLP0	ENST00000551150.5	protein_coding	120200730,120199310,120199118,120198854,120198554,120197322,120196699	120201099,120199485,120199205,120199000,120198739,120197462,120196934	Gene ID= ENSG00000089157.15 TPM= 143.31 Transcript Type= protein_coding
chr12	120201291	120212919	120201291	120212919	+	ENST00000542265.5@PXN-AS1	ENST00000542265.5	antisense_RNA	120201291,120206545,120209839,120212375	120201426,120206621,120209934,120212919	Gene ID= ENSG00000255857.5 TPM= 4.25 Transcript Type= antisense_RNA
chr12	120210447	120265771	120210447	120265771	-	ENST00000424649.6@PXN	ENST00000424649.6	protein_coding	120265617,120224151,120223718,120222863,120222549,120221623,120215103,120214825,120214136,120213842,120210447	120265771,120224377,120223833,120222999,120222750,120221758,120215273,120214998,120214217,120213990,120212580	Gene ID= ENSG00000089159.16 TPM= 69.39 Transcript Type= protein_coding
chr12	120210447	120216315	120210447	120216315	-	transcript5051.chr12.nic@PXN	transcript5051.chr12.nic	protein_coding	120215560,120215103,120214825,120214136,120213842,120210447	120216315,120215273,120214998,120214217,120213990,120212580	Gene ID= ENSG00000089159.16 TPM= 74.7 Transcript Type= NA
chr12	120218043	120265760	120218043	120265760	-	transcript5052.chr12.nic@PXN	transcript5052.chr12.nic	protein_coding	120265617,120224151,120223718,120222863,120222549,120218043	120265760,120224377,120223833,120222999,120222750,120221758	Gene ID= ENSG00000089159.16 TPM= 12.75 Transcript Type= NA
chr12	120210447	120217155	120210447	120217155	-	transcript5055.chr12.nic@PXN	transcript5055.chr12.nic	protein_coding	120215103,120214825,120214136,120213842,120210447	120217155,120214998,120214217,120213990,120212580	Gene ID= ENSG00000089159.16 TPM= 68.33 Transcript Type= NA
chr12	120341624	120342582	120341624	120342582	-	transcript5062.chr12.nnic@NA	transcript5062.chr12.nnic	NA	120341624	120342582	Gene ID= novel_gene_chr12_5063 TPM= 2.12 Transcript Type= NA
chr12	120438090	120440742	120438090	120440742	+	ENST00000229379.2@COX6A1	ENST00000229379.2	protein_coding	120438090,120438379,120440454	120438229,120438521,120440742	Gene ID= ENSG00000111775.2 TPM= 183.75 Transcript Type= protein_coding
chr12	120443961	120446412	120443961	120446412	-	ENST00000546954.1@TRIAP1	ENST00000546954.1	protein_coding	120446226,120443961	120446412,120444955	Gene ID= ENSG00000170855.3 TPM= 13.81 Transcript Type= protein_coding
chr12	120446438	120463749	120446438	120463749	+	ENST00000551765.5@GATC	ENST00000551765.5	protein_coding	120446438,120446657,120457076,120459907	120446561,120446829,120457179,120463749	Gene ID= ENSG00000257218.5 TPM= 9.56 Transcript Type= protein_coding
chr12	120461668	120469793	120461668	120469793	-	ENST00000229390.7@SRSF9	ENST00000229390.7	protein_coding	120469422,120465627,120463950,120461668	120469793,120465787,120464122,120462162	Gene ID= ENSG00000111786.8 TPM= 65.85 Transcript Type= protein_coding
chr12	120496056	120498493	120496056	120498493	+	ENST00000242577.10@DYNLL1	ENST00000242577.10	protein_coding	120496056,120496416,120498073	120496216,120496553,120498493	Gene ID= ENSG00000088986.10 TPM= 77.54 Transcript Type= protein_coding
chr12	120496091	120498491	120496091	120498491	+	ENST00000392508.2@DYNLL1	ENST00000392508.2	protein_coding	120496091,120496402,120498073	120496216,120496553,120498491	Gene ID= ENSG00000088986.10 TPM= 12.75 Transcript Type= protein_coding
chr12	120496113	120498350	120496113	120498350	+	ENST00000549989.1@DYNLL1	ENST00000549989.1	protein_coding	120496113,120498073	120496553,120498350	Gene ID= ENSG00000088986.10 TPM= 1.06 Transcript Type= protein_coding
chr12	120487525	120490783	120487525	120490783	-	transcript5079.chr12.nnic@NA	transcript5079.chr12.nnic	NA	120487525	120490783	Gene ID= novel_gene_chr12_5080 TPM= 2.12 Transcript Type= NA
chr12	120490328	120495940	120490328	120495940	-	ENST00000500741.2@NRAV	ENST00000500741.2	antisense_RNA	120495823,120490328	120495940,120492110	Gene ID= ENSG00000248008.2 TPM= 6.37 Transcript Type= antisense_RNA
chr12	120503274	120529165	120503274	120529165	-	transcript5084.chr12.nic@COQ5	transcript5084.chr12.nic	protein_coding	120528940,120526457,120522214,120516567,120510017,120504895,120503970,120503274	120529165,120526546,120522363,120516788,120510123,120504983,120504081,120503885	Gene ID= ENSG00000110871.14 TPM= 11.68 Transcript Type= NA
chr12	120503274	120529182	120503274	120529182	-	ENST00000288532.10@COQ5	ENST00000288532.10	protein_coding	120528940,120522214,120516567,120510017,120504895,120503970,120503274	120529182,120522363,120516788,120510123,120504983,120504081,120503885	Gene ID= ENSG00000110871.14 TPM= 60.54 Transcript Type= protein_coding
chr12	120534336	120576886	120534336	120576886	+	transcript5115.chr12.nic@RNF10	transcript5115.chr12.nic	protein_coding	120534336,120546405,120552499,120554718,120557282,120557546,120560726,120562945,120563347,120563810,120565072,120565428,120566825,120575631,120575792,120576590	120534968,120546601,120552698,120554808,120557466,120557682,120560886,120563070,120563623,120563943,120565189,120565529,120566980,120575688,120575950,120576886	Gene ID= ENSG00000022840.15 TPM= 13.14 Transcript Type= NA
chr12	120534351	120577594	120534351	120577594	+	ENST00000325954.8@RNF10	ENST00000325954.8	protein_coding	120534351,120546405,120552499,120554718,120557282,120557546,120560726,120562945,120563347,120563810,120565072,120565428,120566825,120571191,120575631,120575792,120576590	120534968,120546601,120552698,120554808,120557466,120557682,120560886,120563070,120563623,120563943,120565189,120565529,120566980,120571291,120575688,120575950,120577594	Gene ID= ENSG00000022840.15 TPM= 59.66 Transcript Type= protein_coding
chr12	120534812	120576886	120534812	120576886	+	ENST00000413266.6@RNF10	ENST00000413266.6	protein_coding	120534812,120546405,120552499,120554718,120557282,120557546,120560726,120562945,120563332,120563810,120565072,120565428,120566825,120571191,120575631,120575792,120576590	120534968,120546601,120552698,120554808,120557466,120557682,120560886,120563070,120563623,120563943,120565189,120565529,120566980,120571291,120575688,120575950,120576886	Gene ID= ENSG00000022840.15 TPM= 74.74 Transcript Type= protein_coding
chr12	120579045	120581398	120579045	120581398	-	ENST00000357500.4@POP5	ENST00000357500.4	protein_coding	120581343,120581115,120579774,120579514,120579045	120581398,120581257,120579923,120579597,120579412	Gene ID= ENSG00000167272.10 TPM= 48.86 Transcript Type= protein_coding
chr12	120687091	120701859	120687091	120701859	+	transcript5133.chr12.nic@MLEC	transcript5133.chr12.nic	protein_coding	120687091,120694091,120694824,120695095,120696316,120700464	120687531,120694269,120695000,120695152,120696541,120701859	Gene ID= ENSG00000110917.7 TPM= 40.36 Transcript Type= NA
chr12	120686869	120701864	120686869	120701864	+	ENST00000228506.7@MLEC	ENST00000228506.7	protein_coding	120686869,120694091,120694824,120695095,120696316	120687531,120694269,120695000,120695152,120701864	Gene ID= ENSG00000110917.7 TPM= 120.02 Transcript Type= protein_coding
chr12	120710435	120723640	120710435	120723640	+	ENST00000344651.4@UNC119B	ENST00000344651.4	protein_coding	120710435,120713274,120716628,120716870,120719920	120710718,120713387,120716739,120717042,120723640	Gene ID= ENSG00000175970.10 TPM= 7.44 Transcript Type= protein_coding
chr12	120725735	120740008	120725735	120740008	+	ENST00000242592.8@ACADS	ENST00000242592.8	protein_coding	120725735,120727026,120736986,120737356,120737837,120738280,120738533,120738820,120739140,120739296	120725931,120727189,120737135,120737467,120737988,120738450,120738670,120738915,120739196,120740008	Gene ID= ENSG00000122971.8 TPM= 284.48 Transcript Type= protein_coding
chr12	120725791	120740008	120725791	120740008	+	transcript5149.chr12.nic@ACADS	transcript5149.chr12.nic	protein_coding	120725791,120727026,120736986,120737837,120738280,120738533,120738820,120739140,120739296	120725931,120727189,120737467,120737988,120738450,120738670,120738915,120739196,120740008	Gene ID= ENSG00000122971.8 TPM= 16.81 Transcript Type= NA
chr12	120762510	120904371	120762510	120904371	-	ENST00000353487.6@SPPL3	ENST00000353487.6	protein_coding	120903845,120810809,120791469,120784474,120783674,120782655,120768953,120768325,120767394,120766263,120762510	120904371,120810886,120791557,120784593,120783752,120782767,120769059,120768488,120767593,120766372,120765070	Gene ID= ENSG00000157837.15 TPM= 5.31 Transcript Type= protein_coding
chr12	120896639	120898333	120896639	120898333	+	transcript5168.chr12.nnic@NA	transcript5168.chr12.nnic	NA	120896639	120898333	Gene ID= novel_gene_chr12_5169 TPM= 2.12 Transcript Type= NA
chr12	121019111	121039242	121019111	121039242	-	ENST00000257570.9@OASL	ENST00000257570.9	protein_coding	121038774,121033461,121031442,121027576,121023990,121019111	121039242,121033743,121031617,121027817,121024137,121021058	Gene ID= ENSG00000135114.12 TPM= 1.06 Transcript Type= protein_coding
chr12	121209857	121234106	121209857	121234106	+	ENST00000337233.8@P2RX4	ENST00000337233.8	protein_coding	121209857,121217134,121221913,121222094,121222947,121228533,121228725,121228963,121232414,121232611,121232997,121233523	121210298,121217281,121221984,121222166,121223043,121228613,121228866,121229099,121232507,121232676,121233092,121234106	Gene ID= ENSG00000135124.14 TPM= 4.25 Transcript Type= protein_coding
chr12	121240525	121296753	121240525	121296753	-	ENST00000404169.7@CAMKK2	ENST00000404169.7	protein_coding	121296638,121274056,121270898,121269528,121268638,121263806,121260319,121255783,121255550,121253273,121252661,121249961,121249787,121248606,121245140,121244573,121240525	121296753,121274585,121270945,121269581,121268689,121263939,121260355,121255804,121255638,121253472,121252714,121250034,121249874,121248734,121245240,121244615,121240869	Gene ID= ENSG00000110931.18 TPM= 5.31 Transcript Type= protein_coding
chr12	121240525	121296686	121240525	121296686	-	ENST00000412367.6@CAMKK2	ENST00000412367.6	protein_coding	121296638,121274056,121270898,121269528,121268638,121263806,121260319,121255783,121255550,121253273,121252661,121249961,121249787,121248606,121245140,121240525	121296686,121274585,121270945,121269581,121268689,121263939,121260355,121255804,121255638,121253472,121252714,121250034,121249874,121248734,121245240,121240869	Gene ID= ENSG00000110931.18 TPM= 4.25 Transcript Type= protein_coding
chr12	121308357	121352462	121308357	121352462	-	ENST00000261819.7@ANAPC5	ENST00000261819.7	protein_coding	121352134,121347802,121346896,121345839,121342003,121337291,121335533,121331347,121330583,121328316,121327096,121320385,121319697,121318501,121318277,121309701,121308357	121352462,121347881,121347005,121346031,121342069,121337392,121335723,121331428,121330672,121328497,121327231,121320459,121319818,121318608,121318424,121309863,121308691	Gene ID= ENSG00000089053.12 TPM= 77.36 Transcript Type= protein_coding
chr12	121308357	121352388	121308357	121352388	-	ENST00000541887.5@ANAPC5	ENST00000541887.5	protein_coding	121352134,121347802,121346896,121345839,121342003,121337291,121335533,121331347,121330583,121328316,121327096,121320385,121319697,121318501,121318277,121309701,121308357	121352388,121347881,121347005,121346031,121342069,121337392,121335723,121331428,121330672,121328458,121327231,121320459,121319818,121318608,121318424,121309863,121308691	Gene ID= ENSG00000089053.12 TPM= 19.47 Transcript Type= protein_coding
chr12	121400119	121424348	121400119	121424348	+	ENST00000392465.7@RNF34	ENST00000392465.7	protein_coding	121400119,121402742,121416159,121417504,121420242,121420577,121423386	121400218,121402807,121416377,121417911,121420334,121420778,121424348	Gene ID= ENSG00000170633.16 TPM= 3.19 Transcript Type= protein_coding
chr12	121400041	121424351	121400041	121424351	+	ENST00000361234.9@RNF34	ENST00000361234.9	protein_coding	121400041,121416159,121417504,121420242,121420577,121423386	121400218,121416377,121417911,121420334,121420778,121424351	Gene ID= ENSG00000170633.16 TPM= 19.12 Transcript Type= protein_coding
chr12	121712752	121778956	121712752	121778956	+	ENST00000342607.10@TMEM120B	ENST00000342607.10	protein_coding	121712752,121743629,121748326,121750380,121752128,121761649,121770907,121771488,121773421,121774658,121775062,121775609,121778077	121712964,121743747,121748442,121750439,121752223,121761738,121770972,121771549,121773513,121774722,121775130,121776444,121778956	Gene ID= ENSG00000188735.12 TPM= 4.25 Transcript Type= nonsense_mediated_decay
chr12	121712762	121753591	121712762	121753591	+	transcript5217.chr12.nic@TMEM120B	transcript5217.chr12.nic	protein_coding	121712762,121743629,121748326,121750380,121752128	121712964,121743747,121748442,121750439,121753591	Gene ID= ENSG00000188735.12 TPM= 2.12 Transcript Type= NA
chr12	121712795	121782062	121712795	121782062	+	ENST00000449592.6@TMEM120B	ENST00000449592.6	protein_coding	121712795,121743629,121748326,121750380,121752128,121761649,121770907,121771488,121773421,121774658,121775062,121775609	121712964,121743747,121748442,121750439,121752223,121761738,121770972,121771549,121773513,121774722,121775130,121782062	Gene ID= ENSG00000188735.12 TPM= 6.37 Transcript Type= protein_coding
chr12	121777754	121794262	121777754	121794262	-	ENST00000267205.6@RHOF	ENST00000267205.6	protein_coding	121793496,121793152,121781083,121780872,121777754	121794262,121793239,121781192,121781006,121779662	Gene ID= ENSG00000139725.7 TPM= 54.17 Transcript Type= protein_coding
chr12	121795267	121802910	121795267	121802910	-	ENST00000542933.5@LINC01089	ENST00000542933.5	lincRNA	121802879,121801707,121799847,121795267	121802910,121801808,121799956,121796242	Gene ID= ENSG00000212694.8 TPM= 2.12 Transcript Type= lincRNA
chr12	121823377	121832656	121823377	121832656	+	transcript5230.chr12.nic@SETD1B	transcript5230.chr12.nic	protein_coding	121823377,121825200,121827519,121827735,121827933,121830066	121823749,121825366,121827650,121827854,121828070,121832656	Gene ID= ENSG00000139718.10 TPM= 10.62 Transcript Type= NA
chr12	121888731	121918297	121888731	121918297	+	ENST00000541212.5@PSMD9	ENST00000541212.5	protein_coding	121888731,121894739,121899634,121903006,121915856,121916284	121888994,121894841,121899845,121903107,121915944,121918297	Gene ID= ENSG00000110801.13 TPM= 80.72 Transcript Type= protein_coding
chr12	121888771	121917863	121888771	121917863	+	ENST00000261817.6@PSMD9	ENST00000261817.6	protein_coding	121888771,121894739,121899634,121903006,121915859,121916284	121888994,121894841,121899845,121903107,121915944,121917863	Gene ID= ENSG00000110801.13 TPM= 4.25 Transcript Type= protein_coding
chr12	122021886	122060905	122021886	122060905	+	ENST00000261822.4@BCL7A	ENST00000261822.4	protein_coding	122021886,122030700,122035331,122043886,122054805,122059092	122022183,122030781,122035427,122044053,122054926,122060905	Gene ID= ENSG00000110987.8 TPM= 10.62 Transcript Type= protein_coding
chr12	122019422	122062044	122019422	122062044	+	ENST00000538010.5@BCL7A	ENST00000538010.5	protein_coding	122019422,122030700,122035331,122043886,122054805,122059092	122022183,122030781,122035427,122044053,122054989,122062044	Gene ID= ENSG00000110987.8 TPM= 33.99 Transcript Type= protein_coding
chr12	122021978	122044371	122021978	122044371	+	ENST00000432926.2@BCL7A	ENST00000432926.2	protein_coding	122021978,122030700,122035331,122043886	122022183,122030781,122035427,122044371	Gene ID= ENSG00000110987.8 TPM= 1.06 Transcript Type= retained_intron
chr12	122038379	122039297	122038379	122039297	+	transcript5255.chr12.nnic@NA	transcript5255.chr12.nnic	NA	122038379	122039297	Gene ID= novel_gene_chr12_5256 TPM= 2.12 Transcript Type= NA
chr12	122133901	122136482	122133901	122136482	+	transcript5263.chr12.nic@MLXIP	transcript5263.chr12.nic	protein_coding	122133901,122135489	122135345,122136482	Gene ID= ENSG00000175727.13 TPM= 2.12 Transcript Type= NA
chr12	122207669	122227534	122207669	122227534	-	ENST00000443649.7@DIABLO	ENST00000443649.7	protein_coding	122227356,122225965,122224512,122218266,122216759,122216488,122207669	122227534,122226653,122224644,122218397,122216869,122216584,122208577	Gene ID= ENSG00000184047.16 TPM= 4.25 Transcript Type= protein_coding
chr12	122207774	122226052	122207774	122226052	-	ENST00000342392.3@DIABLO	ENST00000342392.3	protein_coding	122225965,122224645,122218266,122216759,122216488,122207774	122226052,122224748,122218397,122216869,122216584,122208577	Gene ID= ENSG00000184047.16 TPM= 2.12 Transcript Type= nonsense_mediated_decay
chr12	122207662	122226052	122207662	122226052	-	ENST00000353548.10@DIABLO	ENST00000353548.10	protein_coding	122225965,122224512,122216759,122216488,122207662	122226052,122224644,122216869,122216584,122208577	Gene ID= ENSG00000184047.16 TPM= 2.12 Transcript Type= protein_coding
chr12	122207767	122226062	122207767	122226062	-	ENST00000464942.6@DIABLO	ENST00000464942.6	protein_coding	122224645,122218266,122216759,122216488,122207767	122226062,122218397,122216869,122216584,122208577	Gene ID= ENSG00000184047.16 TPM= 1.06 Transcript Type= protein_coding
chr12	122261025	122266482	122261025	122266482	-	transcript5277.chr12.nic@AC048338.1	transcript5277.chr12.nic	protein_coding	122266307,122264134,122263572,122261025	122266482,122264199,122263699,122261447	Gene ID= ENSG00000256861.1 TPM= 2.12 Transcript Type= NA
chr12	122229564	122266521	122229564	122266521	-	ENST00000267199.8@VPS33A	ENST00000267199.8	protein_coding	122266307,122264134,122263572,122261261,122250983,122249871,122244569,122242382,122239878,122238587,122235786,122232800,122229564	122266521,122264199,122263699,122261447,122251099,122250045,122244762,122242508,122239945,122238724,122235923,122232968,122232427	Gene ID= ENSG00000139719.9 TPM= 7.44 Transcript Type= protein_coding
chr12	122328307	122422754	122328307	122422754	-	transcript5283.chr12.nnic@CLIP1	transcript5283.chr12.nnic	protein_coding	122422521,122417327,122380368,122377389,122363983,122360959,122355115,122354453,122352726,122351111,122347375,122340753,122336632,122334648,122334027,122332987,122328307	122422754,122417463,122380558,122377960,122364107,122361181,122355312,122354556,122352786,122351143,122347479,122341697,122336748,122334705,122334110,122333143,122328426	Gene ID= ENSG00000130779.19 TPM= 9.29 Transcript Type= NA
chr12	122328307	122422742	122328307	122422742	-	transcript5285.chr12.nic@CLIP1	transcript5285.chr12.nic	protein_coding	122422521,122380368,122377389,122363983,122360959,122355115,122354453,122352726,122351111,122347375,122340753,122336632,122334648,122334027,122332987,122328307	122422742,122380558,122377960,122364107,122361181,122355312,122354556,122352786,122351143,122347479,122341697,122336748,122334705,122334110,122333143,122328426	Gene ID= ENSG00000130779.19 TPM= 32.81 Transcript Type= NA
chr12	122328307	122422652	122328307	122422652	-	transcript5290.chr12.nnic@CLIP1	transcript5290.chr12.nnic	protein_coding	122422521,122380368,122377389,122363983,122360959,122355115,122354453,122352726,122351111,122340753,122336632,122334648,122334027,122332987,122328307	122422652,122380558,122377960,122364107,122361181,122355312,122354556,122352786,122351143,122341697,122336748,122334705,122334110,122333143,122328426	Gene ID= ENSG00000130779.19 TPM= 2.54 Transcript Type= NA
chr12	122328307	122422667	122328307	122422667	-	transcript5294.chr12.nic@CLIP1	transcript5294.chr12.nic	protein_coding	122422521,122380368,122377389,122363983,122360959,122355115,122354453,122352726,122340753,122336632,122334648,122334027,122332987,122328307	122422667,122380558,122377960,122364107,122361181,122355312,122354556,122352786,122341697,122336748,122334705,122334110,122333143,122328426	Gene ID= ENSG00000130779.19 TPM= 4.13 Transcript Type= NA
chr12	122349887	122422652	122349887	122422652	-	transcript5310.chr12.nic@CLIP1	transcript5310.chr12.nic	protein_coding	122422521,122380368,122377389,122363983,122360959,122355115,122354453,122352726,122349887	122422652,122380558,122377960,122364107,122361181,122355312,122354556,122352786,122351143	Gene ID= ENSG00000130779.19 TPM= 2.27 Transcript Type= NA
chr12	122271434	122422569	122271434	122422569	-	ENST00000620786.4@CLIP1	ENST00000620786.4	protein_coding	122422521,122380368,122377389,122363983,122360959,122355115,122354453,122352726,122351111,122347375,122340753,122336632,122334648,122334027,122332987,122328261,122327947,122319232,122316749,122309762,122288489,122279028,122278792,122278154,122274038,122271434	122422569,122380558,122377960,122364107,122361181,122355312,122354556,122352786,122351143,122347479,122341697,122336748,122334705,122334110,122333143,122328426,122328162,122319348,122316855,122309882,122288541,122279145,122278942,122278203,122274162,122273100	Gene ID= ENSG00000130779.19 TPM= 30.8 Transcript Type= protein_coding
chr12	122472899	122501073	122472899	122501073	-	ENST00000633063.1@ZCCHC8	ENST00000633063.1	protein_coding	122500640,122498827,122492715,122490462,122489386,122483460,122483279,122482635,122481945,122481522,122480190,122478206,122477841,122472899	122501073,122498867,122492789,122490567,122489463,122483563,122483344,122482695,122482087,122481664,122480311,122478292,122477958,122474275	Gene ID= ENSG00000033030.13 TPM= 8.5 Transcript Type= protein_coding
chr12	122505059	122527000	122505059	122527000	-	ENST00000532695.5@RSRC2	ENST00000532695.5	protein_coding	122526848,122522143,122521385,122520504,122518839,122517227,122515105,122511109,122508218,122506834,122505059	122527000,122522299,122521428,122520581,122519029,122517430,122515227,122511188,122508450,122506923,122505706	Gene ID= ENSG00000111011.17 TPM= 2.12 Transcript Type= nonsense_mediated_decay
chr12	122504726	122527004	122504726	122527004	-	transcript5335.chr12.nic@RSRC2	transcript5335.chr12.nic	protein_coding	122526848,122522143,122521385,122518839,122517227,122515105,122511109,122508218,122506834,122504726	122527004,122522299,122521428,122519029,122517430,122515227,122511188,122508450,122506923,122505706	Gene ID= ENSG00000111011.17 TPM= 17.53 Transcript Type= NA
chr12	122508250	122526949	122508250	122526949	-	ENST00000525335.6@RSRC2	ENST00000525335.6	protein_coding	122526848,122522143,122521385,122518839,122517227,122515105,122514712,122511109,122508250	122526949,122522329,122521428,122519029,122517430,122515227,122514728,122511188,122508447	Gene ID= ENSG00000111011.17 TPM= 2.12 Transcript Type= retained_intron
chr12	122511111	122526995	122511111	122526995	-	ENST00000527399.3@RSRC2	ENST00000527399.3	protein_coding	122526848,122522143,122521385,122520504,122518839,122517231,122515105,122511111	122526995,122522299,122521428,122520581,122519051,122517430,122515227,122511188	Gene ID= ENSG00000111011.17 TPM= 2.12 Transcript Type= nonsense_mediated_decay
chr12	122752774	122771064	122752774	122771064	+	ENST00000280557.10@DENR	ENST00000280557.10	protein_coding	122752774,122753693,122762187,122762845,122765304,122767488,122768782,122769034	122752950,122753807,122762206,122762929,122765387,122767604,122768921,122771064	Gene ID= ENSG00000139726.10 TPM= 33.99 Transcript Type= protein_coding
chr12	122835426	122862960	122835426	122862960	+	ENST00000253083.8@HIP1R	ENST00000253083.8	protein_coding	122835426,122848031,122848466,122848796,122849875,122850835,122851236,122854043,122854905,122855053,122855265,122855551,122855831,122855980,122856256,122856432,122856625,122857021,122858102,122858349,122858838,122859061,122859426,122859772,122860047,122860148,122860423,122860679,122860916,122861131,122861308,122861706	122835643,122848094,122848608,122848852,122849955,122850911,122851297,122854183,122854962,122855128,122855405,122855612,122855903,122856163,122856344,122856548,122856726,122857215,122858249,122858435,122858945,122859197,122859536,122859830,122860077,122860210,122860523,122860784,122861039,122861192,122861514,122862960	Gene ID= ENSG00000130787.13 TPM= 41.42 Transcript Type= protein_coding
chr12	122865328	122872045	122865328	122872045	-	transcript5372.chr12.nnic@VPS37B	transcript5372.chr12.nnic	protein_coding	122871986,122870890,122868480,122865328	122872045,122871061,122868562,122867607	Gene ID= ENSG00000139722.6 TPM= 7.79 Transcript Type= NA
chr12	122865328	122896444	122865328	122896444	-	ENST00000267202.6@VPS37B	ENST00000267202.6	protein_coding	122895952,122870890,122868480,122865328	122896444,122871061,122868562,122867607	Gene ID= ENSG00000139722.6 TPM= 37.53 Transcript Type= protein_coding
chr12	122865328	122896111	122865328	122896111	-	transcript5375.chr12.nnic@VPS37B	transcript5375.chr12.nnic	protein_coding	122895952,122868480,122865328	122896111,122868562,122867607	Gene ID= ENSG00000139722.6 TPM= 7.79 Transcript Type= NA
chr12	122928992	122966496	122928992	122966496	-	ENST00000280560.12@ABCB9	ENST00000280560.12	protein_coding	122966287,122959635,122950451,122949788,122948624,122946025,122944391,122940807,122940111,122935272,122932192,122928992	122966496,122960322,122950565,122949918,122948829,122946222,122944519,122940995,122940284,122935431,122932328,122930171	Gene ID= ENSG00000150967.17 TPM= 7.44 Transcript Type= protein_coding
chr12	122974752	122979438	122974752	122979438	+	ENST00000545612.5@OGFOD2	ENST00000545612.5	protein_coding	122974752,122975811,122976654,122976871,122978360,122978753,122979083	122975121,122975867,122976767,122976970,122978569,122979010,122979438	Gene ID= ENSG00000111325.16 TPM= 1.06 Transcript Type= protein_coding
chr12	122975220	122980041	122975220	122980041	+	ENST00000228922.11@OGFOD2	ENST00000228922.11	protein_coding	122975220,122975811,122976654,122976871,122978442,122978753,122979083	122975383,122975867,122976767,122976970,122978569,122979010,122980041	Gene ID= ENSG00000111325.16 TPM= 7.44 Transcript Type= protein_coding
chr12	122980060	122982913	122980060	122982913	+	ENST00000543566.5@ARL6IP4	ENST00000543566.5	protein_coding	122980060,122981129,122981595,122981957,122982469,122982620	122980745,122981266,122981879,122982074,122982538,122982913	Gene ID= ENSG00000182196.13 TPM= 41.03 Transcript Type= protein_coding
chr12	122980060	122982909	122980060	122982909	+	ENST00000315580.9@ARL6IP4	ENST00000315580.9	protein_coding	122980060,122981129,122981571,122981957,122982469,122982620	122980745,122981299,122981879,122982074,122982538,122982909	Gene ID= ENSG00000182196.13 TPM= 9.93 Transcript Type= protein_coding
chr12	122980189	122982909	122980189	122982909	+	ENST00000453766.6@ARL6IP4	ENST00000453766.6	protein_coding	122980189,122981129,122981595,122981957,122982469,122982620	122980745,122981299,122981879,122982074,122982538,122982909	Gene ID= ENSG00000182196.13 TPM= 30.64 Transcript Type= protein_coding
chr12	122980666	122982909	122980666	122982909	+	transcript5407.chr12.nic@ARL6IP4	transcript5407.chr12.nic	protein_coding	122980666,122981129,122981571,122981957,122982469,122982620	122980812,122981299,122981879,122982074,122982538,122982909	Gene ID= ENSG00000182196.13 TPM= 8.38 Transcript Type= NA
chr12	122980495	122982909	122980495	122982909	+	ENST00000454885.6@ARL6IP4	ENST00000454885.6	protein_coding	122980495,122981129,122981571,122981957,122982469,122982620	122980887,122981266,122981879,122982074,122982538,122982909	Gene ID= ENSG00000182196.13 TPM= 6.79 Transcript Type= protein_coding
chr12	122980703	122982860	122980703	122982860	+	ENST00000412505.6@ARL6IP4	ENST00000412505.6	protein_coding	122980703,122981129,122981595,122982031,122982469,122982620	122980812,122981266,122981809,122982074,122982538,122982860	Gene ID= ENSG00000182196.13 TPM= 2.12 Transcript Type= protein_coding
chr12	122980721	122982873	122980721	122982873	+	ENST00000536502.5@ARL6IP4	ENST00000536502.5	protein_coding	122980721,122981595,122981957,122982469,122982620	122981266,122981879,122982074,122982538,122982873	Gene ID= ENSG00000182196.13 TPM= 1.06 Transcript Type= retained_intron
chr12	122980703	122982909	122980703	122982909	+	transcript5427.chr12.nnic@NA	transcript5427.chr12.nnic	NA	122980703	122982909	Gene ID= novel_gene_chr12_5428 TPM= 3.19 Transcript Type= NA
chr12	123156399	123233164	123156399	123233164	-	transcript5433.chr12.nic@MPHOSPH9	transcript5433.chr12.nic	protein_coding	123233075,123230261,123227463,123223038,123221372,123218376,123214744,123210056,123202624,123202164,123198247,123194386,123181163,123179926,123176688,123166655,123165302,123163950,123163014,123162115,123161136,123160781,123156399	123233164,123230522,123227572,123223127,123221895,123218499,123214834,123210162,123203084,123202319,123198334,123194601,123181210,123179990,123176789,123166789,123165477,123164090,123163134,123162218,123161383,123160849,123156908	Gene ID= ENSG00000051825.14 TPM= 2.12 Transcript Type= NA
chr12	123156399	123233164	123156399	123233164	-	transcript5434.chr12.nic@MPHOSPH9	transcript5434.chr12.nic	protein_coding	123233075,123230261,123227463,123223038,123221372,123218376,123214744,123210056,123202624,123202164,123198247,123194386,123181163,123179926,123176688,123166655,123165302,123163950,123163014,123162115,123161136,123160781,123156399	123233164,123230522,123227616,123223127,123221895,123218499,123214834,123210162,123203084,123202319,123198334,123194601,123181210,123179990,123176789,123166789,123165477,123164090,123163134,123162218,123161383,123160849,123156908	Gene ID= ENSG00000051825.14 TPM= 3.19 Transcript Type= NA
chr12	123204987	123207163	123204987	123207163	+	transcript5455.chr12.nnic@NA	transcript5455.chr12.nnic	NA	123204987	123207163	Gene ID= novel_gene_chr12_5456 TPM= 3.19 Transcript Type= NA
chr12	123232916	123257959	123232916	123257959	+	ENST00000253233.5@C12orf65	ENST00000253233.5	protein_coding	123232916,123253647,123256813	123233531,123253956,123257959	Gene ID= ENSG00000130921.7 TPM= 12.75 Transcript Type= protein_coding
chr12	123260981	123272140	123260981	123272140	-	ENST00000261692.6@CDK2AP1	ENST00000261692.6	protein_coding	123271564,123267185,123265196,123260981	123272140,123267282,123265322,123261803	Gene ID= ENSG00000111328.6 TPM= 259.17 Transcript Type= protein_coding
chr12	123261003	123271141	123261003	123271141	-	ENST00000535979.5@CDK2AP1	ENST00000535979.5	protein_coding	123270887,123267185,123265196,123261003	123271141,123267282,123265322,123261803	Gene ID= ENSG00000111328.6 TPM= 5.31 Transcript Type= protein_coding
chr12	123320833	123364869	123320833	123364869	-	transcript5462.chr12.nic@SBNO1	transcript5462.chr12.nic	protein_coding	123364701,123350310,123348029,123345258,123340988,123336395,123334053,123331242,123330419,123328734,123327892,123327707,123327426,123326152,123325502,123323680,123321535,123320833	123364869,123350441,123348133,123345567,123341088,123336491,123334213,123331375,123330509,123328895,123328027,123327812,123327579,123326334,123325599,123323831,123321732,123320866	Gene ID= ENSG00000139697.13 TPM= 20.71 Transcript Type= NA
chr12	123290907	123293539	123290907	123293539	-	transcript5548.chr12.nnic@NA	transcript5548.chr12.nnic	NA	123290907	123293539	Gene ID= novel_gene_chr12_5549 TPM= 2.12 Transcript Type= NA
chr12	123364953	123366113	123364953	123366113	+	ENST00000543072.1@AC137767.1	ENST00000543072.1	lincRNA	123364953,123365525	123365115,123366113	Gene ID= ENSG00000256092.2 TPM= 1.06 Transcript Type= lincRNA
chr12	123388883	123409358	123388883	123409358	+	transcript5476.chr12.nnic@KMT5A	transcript5476.chr12.nnic	protein_coding	123388883,123389433,123390630,123395047,123396345,123403573,123404884,123407493	123389182,123389554,123390786,123395266,123396432,123403632,123405074,123409358	Gene ID= ENSG00000183955.12 TPM= 33.28 Transcript Type= NA
chr12	123388917	123409358	123388917	123409358	+	transcript5488.chr12.nic@KMT5A	transcript5488.chr12.nic	protein_coding	123388917,123390630,123395047,123396345,123403573,123404884,123407493	123389182,123390786,123395266,123396432,123403632,123405074,123409358	Gene ID= ENSG00000183955.12 TPM= 31.86 Transcript Type= NA
chr12	123389228	123408507	123389228	123408507	+	transcript5494.chr12.nic@KMT5A	transcript5494.chr12.nic	protein_coding	123389228,123390630,123395047,123396345,123403573,123404884,123407493	123389554,123390786,123395266,123396432,123403632,123405074,123408507	Gene ID= ENSG00000183955.12 TPM= 6.02 Transcript Type= NA
chr12	123458144	123466390	123458144	123466390	+	transcript5518.chr12.nnic@SNRNP35	transcript5518.chr12.nnic	protein_coding	123458144,123458964,123459696,123465538	123458216,123459031,123459900,123466390	Gene ID= ENSG00000184209.14 TPM= 9.03 Transcript Type= NA
chr12	123458098	123467669	123458098	123467669	+	transcript5528.chr12.nnic@SNRNP35	transcript5528.chr12.nnic	protein_coding	123458098,123465538,123467487	123458216,123466273,123467669	Gene ID= ENSG00000184209.14 TPM= 2.66 Transcript Type= NA
chr12	123457641	123466936	123457641	123466936	+	ENST00000526639.2@SNRNP35	ENST00000526639.2	protein_coding	123457641,123465538	123458216,123466936	Gene ID= ENSG00000184209.14 TPM= 45.67 Transcript Type= protein_coding
chr12	123471818	123534392	123471818	123534392	-	transcript5478.chr12.nnic@RILPL1	transcript5478.chr12.nnic	protein_coding	123533174,123523495,123499418,123498544,123485633,123484180,123475364,123471818	123534392,123523645,123499536,123498765,123485805,123484272,123475387,123472682	Gene ID= ENSG00000188026.12 TPM= 10.6 Transcript Type= NA
chr12	123482621	123534392	123482621	123534392	-	transcript5505.chr12.nic@RILPL1	transcript5505.chr12.nic	protein_coding	123533174,123523495,123499418,123498544,123485633,123482621	123534392,123523645,123499536,123498765,123485805,123484272	Gene ID= ENSG00000188026.12 TPM= 11.66 Transcript Type= NA
chr12	123471816	123533718	123471816	123533718	-	ENST00000636882.1@RILPL1	ENST00000636882.1	protein_coding	123533174,123523495,123499418,123498544,123485633,123484180,123475663,123471816	123533718,123523645,123499536,123498765,123485805,123484272,123475750,123472682	Gene ID= ENSG00000188026.12 TPM= 21.39 Transcript Type= protein_coding
chr12	123512770	123514499	123512770	123514499	+	transcript5544.chr12.nnic@NA	transcript5544.chr12.nnic	NA	123512770	123514499	Gene ID= novel_gene_chr12_5545 TPM= 4.25 Transcript Type= NA
chr12	123516726	123517451	123516726	123517451	+	transcript5546.chr12.nnic@NA	transcript5546.chr12.nnic	NA	123516726	123517451	Gene ID= novel_gene_chr12_5547 TPM= 2.12 Transcript Type= NA
chr12	123584516	123598139	123584516	123598139	+	transcript5552.chr12.nic@TMED2	transcript5552.chr12.nic	protein_coding	123584516,123586747,123587611,123590342,123596605	123584816,123586939,123587631,123590449,123598139	Gene ID= ENSG00000086598.10 TPM= 279.35 Transcript Type= NA
chr12	123584531	123598577	123584531	123598577	+	ENST00000262225.7@TMED2	ENST00000262225.7	protein_coding	123584531,123586747,123590342,123596605	123584816,123586939,123590449,123598577	Gene ID= ENSG00000086598.10 TPM= 6.37 Transcript Type= protein_coding
chr12	123621025	123633760	123621025	123633760	-	transcript5562.chr12.nnic@EIF2B1	transcript5562.chr12.nnic	protein_coding	123633545,123632345,123630397,123630169,123627044,123626425,123624787,123622636,123621708,123621025	123633760,123632446,123630533,123630285,123627156,123626493,123624862,123622761,123621920,123621422	Gene ID= ENSG00000111361.12 TPM= 2.66 Transcript Type= NA
chr12	123620406	123633766	123620406	123633766	-	ENST00000424014.6@EIF2B1	ENST00000424014.6	protein_coding	123633545,123632345,123630397,123630169,123627044,123626425,123624787,123622636,123620406	123633766,123632446,123630533,123630285,123627156,123626493,123624862,123622761,123621920	Gene ID= ENSG00000111361.12 TPM= 87.63 Transcript Type= protein_coding
chr12	123633829	123662606	123633829	123662606	+	ENST00000543341.6@GTF2H3	ENST00000543341.6	protein_coding	123633829,123639264,123645455,123647963,123650994,123652532,123652707,123654924,123655771,123659516,123659795,123660046,123660166	123633872,123639343,123645561,123648126,123651056,123652561,123652735,123654998,123655824,123659584,123659930,123660082,123662606	Gene ID= ENSG00000111358.13 TPM= 5.31 Transcript Type= protein_coding
chr12	123712318	123761755	123712318	123761755	+	ENST00000330342.7@ATP6V0A2	ENST00000330342.7	protein_coding	123712318,123718623,123722351,123724654,123726197,123727783,123733926,123735531,123737059,123743785,123744201,123744597,123744882,123747607,123748575,123751110,123752283,123754420,123756815,123757927	123712682,123718701,123722448,123724791,123726285,123727909,123734008,123735624,123737271,123743935,123744337,123744784,123744972,123747725,123748785,123751229,123752402,123754537,123756986,123761755	Gene ID= ENSG00000185344.13 TPM= 7.44 Transcript Type= protein_coding
chr12	123729324	123732407	123729324	123732407	-	transcript5581.chr12.nnic@NA	transcript5581.chr12.nnic	NA	123729324	123732407	Gene ID= novel_gene_chr12_5582 TPM= 3.19 Transcript Type= NA
chr12	123936417	123973005	123936417	123973005	-	transcript5587.chr12.nnic@CCDC92	transcript5587.chr12.nnic	protein_coding	123972529,123944669,123944272,123943347,123942744,123936417	123973005,123944740,123944364,123943493,123942785,123937830	Gene ID= ENSG00000119242.8 TPM= 2.12 Transcript Type= NA
chr12	123936417	123972857	123936417	123972857	-	transcript5588.chr12.nic@CCDC92	transcript5588.chr12.nic	protein_coding	123972529,123956284,123944272,123943347,123942744,123936417	123972857,123956444,123944364,123943493,123942785,123937830	Gene ID= ENSG00000119242.8 TPM= 3.19 Transcript Type= NA
chr12	123935622	123972824	123935622	123972824	-	ENST00000238156.7@CCDC92	ENST00000238156.7	protein_coding	123972529,123944272,123943347,123942744,123935622	123972824,123944364,123943493,123942785,123937830	Gene ID= ENSG00000119242.8 TPM= 11.68 Transcript Type= protein_coding
chr12	123936436	123972734	123936436	123972734	-	ENST00000545891.5@CCDC92	ENST00000545891.5	protein_coding	123972529,123943347,123942744,123936436	123972734,123943493,123942785,123937830	Gene ID= ENSG00000119242.8 TPM= 10.62 Transcript Type= protein_coding
chr12	123932287	123936562	123932287	123936562	-	transcript5608.chr12.nnic@NA	transcript5608.chr12.nnic	NA	123932287	123936562	Gene ID= novel_gene_chr12_5609 TPM= 2.12 Transcript Type= NA
chr12	123973227	124015426	123973227	124015426	+	transcript5583.chr12.nic@ZNF664	transcript5583.chr12.nic	protein_coding	123973227,123973886,123988043,124003423,124004878,124011381,124011546	123973352,123974020,123988138,124003540,124004935,124011441,124015426	Gene ID= ENSG00000179195.15 TPM= 8.5 Transcript Type= NA
chr12	123973184	124015426	123973184	124015426	+	transcript5591.chr12.nic@ZNF664	transcript5591.chr12.nic	protein_coding	123973184,123973886,123988043,124011381,124011546	123973303,123974020,123988138,124011441,124015426	Gene ID= ENSG00000179195.15 TPM= 10.62 Transcript Type= NA
chr12	123973215	124015439	123973215	124015439	+	ENST00000538932.6@ZNF664	ENST00000538932.6	protein_coding	123973215,123973886,123988046,124011381,124011546	123973352,123974020,123988138,124011441,124015439	Gene ID= ENSG00000179195.15 TPM= 15.93 Transcript Type= protein_coding
chr12	124402488	124567636	124402488	124567636	-	transcript5611.chr12.nic@NCOR2	transcript5611.chr12.nic	protein_coding	124567308,124535565,124495147,124486441,124483596,124472952,124466173,124457106,124449815,124437930,124430615,124429613,124426622,124422501,124419957,124402488	124567636,124535611,124495368,124486568,124483773,124473131,124466286,124457162,124449867,124437996,124430787,124429706,124426800,124422555,124420055,124402561	Gene ID= ENSG00000196498.13 TPM= 8.5 Transcript Type= NA
chr12	124324415	124328304	124324415	124328304	-	transcript5617.chr12.nnic@NCOR2	transcript5617.chr12.nnic	protein_coding	124328227,124327547,124326191,124324415	124328304,124327633,124326370,124325583	Gene ID= ENSG00000196498.13 TPM= 80.72 Transcript Type= NA
chr12	124328533	124331152	124328533	124331152	-	transcript5619.chr12.nnic@NA	transcript5619.chr12.nnic	NA	124328533	124331152	Gene ID= novel_gene_chr12_5620 TPM= 2.12 Transcript Type= NA
chr12	124366697	124370091	124366697	124370091	-	transcript5621.chr12.nnic@NA	transcript5621.chr12.nnic	NA	124366697	124370091	Gene ID= novel_gene_chr12_5622 TPM= 2.12 Transcript Type= NA
chr12	124776856	124863917	124776856	124863917	-	ENST00000339570.9@SCARB1	ENST00000339570.9	protein_coding	124863595,124817550,124814973,124814202,124811870,124810174,124807761,124800124,124795195,124787406,124786357,124776856	124863917,124817707,124815114,124814405,124811965,124810289,124807927,124800242,124795268,124787457,124786503,124778586	Gene ID= ENSG00000073060.15 TPM= 10.62 Transcript Type= protein_coding
chr12	124777627	124779884	124777627	124779884	-	transcript5630.chr12.nnic@NA	transcript5630.chr12.nnic	NA	124777627	124779884	Gene ID= novel_gene_chr12_5631 TPM= 3.19 Transcript Type= NA
chr12	124911648	124915147	124911648	124915147	-	ENST00000339647.5@UBC	ENST00000339647.5	protein_coding	124914587,124911648	124915147,124913774	Gene ID= ENSG00000150991.14 TPM= 913.72 Transcript Type= protein_coding
chr12	124911604	124915348	124911604	124915348	-	ENST00000536769.1@UBC	ENST00000536769.1	protein_coding	124911604	124915348	Gene ID= ENSG00000150991.14 TPM= 166.41 Transcript Type= protein_coding
chr12	124946826	124980730	124946826	124980730	-	transcript5648.chr12.nic@DHX37	transcript5648.chr12.nic	protein_coding	124980490,124977342,124975419,124972503,124971302,124968867,124968534,124967123,124966793,124965668,124964930,124964394,124960312,124957029,124956691,124954087,124953880,124952398,124950690,124950413,124950149,124949986,124948084,124946826	124980730,124977490,124975511,124972599,124971415,124968968,124968648,124967218,124966878,124965812,124965006,124964626,124960423,124957135,124956879,124954211,124953996,124952570,124950804,124950550,124950243,124950059,124948181,124947887	Gene ID= ENSG00000150990.7 TPM= 4.25 Transcript Type= NA
chr12	125065379	125143320	125065379	125143320	+	ENST00000316519.10@AACS	ENST00000316519.10	protein_coding	125065379,125073876,125076491,125086330,125091426,125102679,125103000,125107121,125114477,125118641,125124705,125124902,125128161,125129335,125134003,125134794,125136662,125142092	125065717,125073979,125076611,125086443,125091523,125102793,125103081,125107268,125114557,125118765,125124769,125125024,125128274,125129460,125134072,125134852,125136864,125143320	Gene ID= ENSG00000081760.16 TPM= 11.68 Transcript Type= protein_coding
chr12	127146184	127147245	127146184	127147245	+	transcript5662.chr12.nnic@NA	transcript5662.chr12.nnic	NA	127146184	127147245	Gene ID= novel_gene_chr12_5663 TPM= 2.12 Transcript Type= NA
chr12	128793195	128824038	128793195	128824038	-	transcript5666.chr12.nic@SLC15A4	transcript5666.chr12.nic	protein_coding	128823398,128814775,128809943,128809396,128808788,128800854,128799259,128793195	128824038,128815070,128810053,128809473,128808956,128801009,128799417,128794356	Gene ID= ENSG00000139370.11 TPM= 2.66 Transcript Type= NA
chr12	128813186	128824038	128813186	128824038	-	transcript5676.chr12.nic@SLC15A4	transcript5676.chr12.nic	protein_coding	128823398,128813186	128824038,128815070	Gene ID= ENSG00000139370.11 TPM= 5.31 Transcript Type= NA
chr12	128793191	128823983	128793191	128823983	-	ENST00000266771.9@SLC15A4	ENST00000266771.9	protein_coding	128823398,128814775,128809943,128809396,128808788,128800854,128799259,128793191	128823983,128815070,128810111,128809473,128808956,128801009,128799417,128794356	Gene ID= ENSG00000139370.11 TPM= 46.2 Transcript Type= protein_coding
chr12	130789600	130839290	130789600	130839290	-	transcript5680.chr12.nnic@STX2	transcript5680.chr12.nnic	protein_coding	130839070,130827193,130821689,130812957,130808631,130806982,130801415,130801153,130798525,130789600	130839290,130827267,130821788,130813031,130808704,130807090,130801488,130801290,130798635,130791916	Gene ID= ENSG00000111450.13 TPM= 2.66 Transcript Type= NA
chr12	130798393	130839290	130798393	130839290	-	transcript5688.chr12.nic@STX2	transcript5688.chr12.nic	protein_coding	130839070,130827193,130821689,130812957,130808631,130806982,130801415,130801153,130798393	130839290,130827267,130821788,130813031,130808704,130807090,130801488,130801290,130798635	Gene ID= ENSG00000111450.13 TPM= 9.56 Transcript Type= NA
chr12	130789600	130839266	130789600	130839266	-	ENST00000261653.10@STX2	ENST00000261653.10	protein_coding	130839070,130827193,130821689,130812957,130808631,130806982,130801415,130801153,130798525,130789600	130839266,130827267,130821788,130813031,130808704,130807090,130801488,130801290,130798635,130791977	Gene ID= ENSG00000111450.13 TPM= 16.46 Transcript Type= protein_coding
chr12	130871879	130877678	130871879	130877678	+	ENST00000543796.5@RAN	ENST00000543796.5	protein_coding	130871879,130872584,130872836,130873003,130874546,130875612,130875882	130872126,130872629,130872920,130873128,130874733,130875782,130877678	Gene ID= ENSG00000132341.11 TPM= 409.99 Transcript Type= protein_coding
chr12	130953888	130961825	130953888	130961825	+	transcript5705.chr12.nnic@ADGRD1	transcript5705.chr12.nnic	protein_coding	130953888,130954624,130961488	130954531,130954660,130961825	Gene ID= ENSG00000111452.12 TPM= 2.12 Transcript Type= NA
chr12	131137594	131141469	131137594	131141469	+	transcript5706.chr12.nic@ADGRD1	transcript5706.chr12.nic	protein_coding	131137594,131139168	131138229,131141469	Gene ID= ENSG00000111452.12 TPM= 41.42 Transcript Type= NA
chr12	130955125	130958177	130955125	130958177	-	transcript5709.chr12.nnic@NA	transcript5709.chr12.nnic	NA	130955125	130958177	Gene ID= novel_gene_chr12_5710 TPM= 31.86 Transcript Type= NA
chr12	130959984	130961345	130959984	130961345	+	transcript5707.chr12.nnic@NA	transcript5707.chr12.nnic	NA	130959984	130961345	Gene ID= novel_gene_chr12_5708 TPM= 2.12 Transcript Type= NA
chr12	131711080	131778181	131711080	131778181	+	transcript5713.chr12.nic@SFSWAP	transcript5713.chr12.nic	protein_coding	131711080,131714071,131714822,131719454,131725405,131726940,131728293,131753123,131754368,131755386,131756473,131764456,131766118,131778065	131711447,131714240,131714953,131719539,131725630,131727052,131728428,131753363,131754499,131755479,131756644,131764686,131766308,131778181	Gene ID= ENSG00000061936.9 TPM= 19.12 Transcript Type= NA
chr12	131711089	131799737	131711089	131799737	+	ENST00000261674.8@SFSWAP	ENST00000261674.8	protein_coding	131711089,131714071,131714822,131719454,131725405,131726940,131728293,131753123,131754368,131755386,131756473,131764456,131766118,131778065,131786463,131797178,131799037,131799423	131711447,131714240,131714953,131719539,131725630,131727052,131728428,131753363,131754499,131755479,131756644,131764686,131766308,131778330,131786588,131797360,131799109,131799737	Gene ID= ENSG00000061936.9 TPM= 22.31 Transcript Type= protein_coding
chr12	131741589	131746482	131741589	131746482	-	transcript5717.chr12.nnic@NA	transcript5717.chr12.nnic	NA	131741589	131746482	Gene ID= novel_gene_chr12_5718 TPM= 3.19 Transcript Type= NA
chr12	131894651	131923167	131894651	131923167	+	ENST00000321867.5@ULK1	ENST00000321867.5	protein_coding	131894651,131895601,131895783,131906892,131907495,131908644,131908898,131909136,131909775,131909919,131910254,131910712,131911942,131913198,131913747,131914352,131915083,131915335,131915891,131916398,131916953,131917411,131918497,131919212,131919472,131919979,131921100,131921306	131895112,131895693,131895824,131906924,131907531,131908817,131908971,131909237,131909833,131910001,131910304,131910800,131912089,131913258,131913836,131914477,131915231,131915421,131916159,131916591,131917062,131917554,131918681,131919384,131919590,131920136,131921235,131923167	Gene ID= ENSG00000177169.9 TPM= 82.85 Transcript Type= protein_coding
chr12	131901041	131903526	131901041	131903526	-	transcript5728.chr12.nnic@NA	transcript5728.chr12.nnic	NA	131901041	131903526	Gene ID= novel_gene_chr12_5729 TPM= 2.12 Transcript Type= NA
chr12	131924466	131928389	131924466	131928389	-	transcript5727.chr12.nic@AC131009.1	transcript5727.chr12.nic	lincRNA	131927963,131924466	131928389,131924766	Gene ID= ENSG00000255992.1 TPM= 2.12 Transcript Type= NA
chr12	131925713	131926524	131925713	131926524	-	transcript5730.chr12.nnic@NA	transcript5730.chr12.nnic	NA	131925713	131926524	Gene ID= novel_gene_chr12_5731 TPM= 2.12 Transcript Type= NA
chr12	131929223	131945896	131929223	131945896	+	ENST00000376649.7@PUS1	ENST00000376649.7	protein_coding	131929223,131929907,131932175,131939173,131941292,131943539	131929796,131930135,131932312,131939275,131941983,131945896	Gene ID= ENSG00000177192.13 TPM= 2.12 Transcript Type= protein_coding
chr12	131929200	131943859	131929200	131943859	+	ENST00000443358.6@PUS1	ENST00000443358.6	protein_coding	131929200,131929907,131932175,131939173,131941292,131943539	131929380,131930135,131932312,131939275,131941983,131943859	Gene ID= ENSG00000177192.13 TPM= 1.06 Transcript Type= protein_coding
chr12	132084285	132085797	132084285	132085797	+	ENST00000537558.5@EP400NL	ENST00000537558.5	transcribed_unprocessed_pseudogene	132084285,132084964,132085405	132084399,132085316,132085797	Gene ID= ENSG00000185684.13 TPM= 1.06 Transcript Type= processed_transcript
chr12	132101309	132103311	132101309	132103311	-	transcript5742.chr12.nnic@NA	transcript5742.chr12.nnic	NA	132101309	132103311	Gene ID= novel_gene_chr12_5743 TPM= 2.12 Transcript Type= NA
chr12	132136594	132144335	132136594	132144335	-	ENST00000397333.3@DDX51	ENST00000397333.3	protein_coding	132143993,132143695,132142728,132142277,132142119,132141850,132141498,132141275,132140831,132140620,132140423,132140098,132139861,132139635,132136594	132144335,132143909,132142878,132142422,132142190,132141956,132141606,132141420,132141020,132140735,132140539,132140199,132139924,132139769,132139298	Gene ID= ENSG00000185163.9 TPM= 4.25 Transcript Type= protein_coding
chr12	132144448	132152441	132144448	132152441	+	ENST00000330579.5@NOC4L	ENST00000330579.5	protein_coding	132144448,132144854,132145559,132147281,132147633,132147880,132148072,132148609,132148784,132150981,132151258,132151484,132151738,132152084,132152282	132144605,132144974,132145665,132147388,132147782,132147979,132148106,132148659,132148895,132151041,132151368,132151644,132151820,132152197,132152441	Gene ID= ENSG00000184967.6 TPM= 21.24 Transcript Type= protein_coding
chr12	132571566	132584296	132571566	132584296	+	transcript5757.chr12.nic@FBRSL1	transcript5757.chr12.nic	protein_coding	132571566,132572527,132574090,132574319,132574493,132576799,132581439,132581741,132582062,132582971	132572344,132572622,132574158,132574348,132574564,132576931,132581516,132581824,132582266,132584296	Gene ID= ENSG00000112787.12 TPM= 40.36 Transcript Type= NA
chr12	132490150	132511952	132490150	132511952	+	transcript5762.chr12.nic@FBRSL1	transcript5762.chr12.nic	protein_coding	132490150,132508153,132509166	132490861,132508350,132511952	Gene ID= ENSG00000112787.12 TPM= 35.05 Transcript Type= NA
chr12	132511556	132515543	132511556	132515543	+	transcript5765.chr12.nnic@NA	transcript5765.chr12.nnic	NA	132511556	132515543	Gene ID= novel_gene_chr12_5766 TPM= 3.19 Transcript Type= NA
chr12	132548606	132554494	132548606	132554494	+	transcript5767.chr12.nnic@NA	transcript5767.chr12.nnic	NA	132548606	132554494	Gene ID= novel_gene_chr12_5768 TPM= 11.68 Transcript Type= NA
chr12	132564504	132567217	132564504	132567217	-	transcript5769.chr12.nnic@NA	transcript5769.chr12.nnic	NA	132564504	132567217	Gene ID= novel_gene_chr12_5770 TPM= 2.12 Transcript Type= NA
chr12	132603150	132604189	132603150	132604189	-	transcript5771.chr12.nnic@NA	transcript5771.chr12.nnic	NA	132603150	132604189	Gene ID= novel_gene_chr12_5772 TPM= 2.12 Transcript Type= NA
chr12	132687564	132704976	132687564	132704976	+	transcript5774.chr12.nic@PXMP2	transcript5774.chr12.nic	protein_coding	132687564,132690263,132695884,132701250,132702429,132704619	132687792,132690376,132696046,132701369,132702564,132704976	Gene ID= ENSG00000176894.9 TPM= 2.47 Transcript Type= NA
chr12	132687643	132702116	132687643	132702116	+	transcript5778.chr12.nic@PXMP2	transcript5778.chr12.nic	protein_coding	132687643,132690263,132695884,132701250	132687792,132690376,132696046,132702116	Gene ID= ENSG00000176894.9 TPM= 3.19 Transcript Type= NA
chr12	132687636	132704991	132687636	132704991	+	transcript5779.chr12.nic@PXMP2	transcript5779.chr12.nic	protein_coding	132687636,132690263,132701250,132704619	132687792,132690376,132701369,132704991	Gene ID= ENSG00000176894.9 TPM= 3.54 Transcript Type= NA
chr12	132687606	132704991	132687606	132704991	+	ENST00000317479.7@PXMP2	ENST00000317479.7	protein_coding	132687606,132690263,132695884,132701250,132704619	132687792,132690376,132696046,132701369,132704991	Gene ID= ENSG00000176894.9 TPM= 63.02 Transcript Type= protein_coding
chr12	132710844	132722710	132710844	132722710	+	transcript5783.chr12.nnic@PGAM5	transcript5783.chr12.nnic	protein_coding	132710844,132714858,132717439,132717710,132717987,132720678,132721852	132711067,132715036,132717564,132717798,132718120,132721278,132722710	Gene ID= ENSG00000247077.6 TPM= 2.12 Transcript Type= NA
chr12	132710819	132722734	132710819	132722734	+	ENST00000498926.6@PGAM5	ENST00000498926.6	protein_coding	132710819,132714858,132717439,132717710,132717987,132720678	132711067,132715036,132717564,132717798,132718120,132722734	Gene ID= ENSG00000247077.6 TPM= 7.44 Transcript Type= protein_coding
chr12	132726363	132761868	132726363	132761868	-	transcript5791.chr12.nnic@ANKLE2	transcript5791.chr12.nnic	protein_coding	132761618,132754675,132750643,132748138,132747832,132743154,132741419,132736893,132735406,132734385,132729679,132728032,132727223,132726363	132761868,132755133,132750849,132748331,132748020,132743276,132741485,132737065,132735512,132734575,132730270,132728163,132727443,132726583	Gene ID= ENSG00000176915.14 TPM= 2.12 Transcript Type= NA
chr12	132725503	132761888	132725503	132761888	-	ENST00000357997.9@ANKLE2	ENST00000357997.9	protein_coding	132761618,132754675,132750643,132748138,132747832,132743154,132741419,132736893,132735406,132734385,132729679,132728032,132725503	132761888,132755133,132750849,132748331,132748020,132743276,132741485,132737065,132735512,132734575,132730270,132728163,132727443	Gene ID= ENSG00000176915.14 TPM= 3.19 Transcript Type= protein_coding
chr12	132738529	132740969	132738529	132740969	-	transcript5803.chr12.nnic@NA	transcript5803.chr12.nnic	NA	132738529	132740969	Gene ID= novel_gene_chr12_5804 TPM= 2.12 Transcript Type= NA
chr12	132791242	132828869	132791242	132828869	-	transcript5819.chr12.nnic@GOLGA3	transcript5819.chr12.nnic	protein_coding	132828803,132821996,132816660,132813307,132807891,132807177,132804716,132801767,132798340,132796539,132795852,132791242	132828869,132822311,132816812,132813419,132808549,132807288,132805022,132801969,132798477,132796700,132796220,132791293	Gene ID= ENSG00000090615.14 TPM= 3.19 Transcript Type= NA
chr12	132812952	132828869	132812952	132828869	-	transcript5824.chr12.nnic@GOLGA3	transcript5824.chr12.nnic	protein_coding	132828803,132821996,132816660,132812952	132828869,132822311,132816812,132813419	Gene ID= ENSG00000090615.14 TPM= 3.19 Transcript Type= NA
chr12	132792003	132794354	132792003	132794354	+	transcript5829.chr12.nnic@NA	transcript5829.chr12.nnic	NA	132792003,132793108,132793628	132793027,132793507,132794354	Gene ID= novel_gene_chr12_5830 TPM= 3.19 Transcript Type= NA
chr12	132840352	132887628	132840352	132887628	-	transcript5811.chr12.nic@CHFR	transcript5811.chr12.nic	protein_coding	132887547,132887196,132877555,132872285,132870724,132869619,132861467,132859068,132857405,132856468,132853431,132851618,132848641,132848085,132847043,132844027,132843011,132840352	132887628,132887340,132877654,132872394,132870783,132869798,132861634,132859227,132857559,132856630,132853573,132851734,132848724,132848155,132847130,132844134,132843083,132841596	Gene ID= ENSG00000072609.17 TPM= 10.62 Transcript Type= NA
chr12	132840352	132887623	132840352	132887623	-	ENST00000450056.6@CHFR	ENST00000450056.6	protein_coding	132887547,132887196,132877555,132872285,132870724,132869619,132861467,132859068,132857405,132856468,132853431,132851618,132848641,132848085,132847043,132844027,132843011,132840352	132887623,132887340,132877654,132872394,132870783,132869798,132861634,132859227,132857559,132856630,132853573,132851737,132848724,132848155,132847130,132844134,132843083,132841596	Gene ID= ENSG00000072609.17 TPM= 19.12 Transcript Type= protein_coding
chr12	132887842	132888583	132887842	132888583	+	ENST00000424075.2@AC127070.2	ENST00000424075.2	antisense_RNA	132887842,132888120	132887932,132888583	Gene ID= ENSG00000236617.2 TPM= 1.06 Transcript Type= antisense_RNA
chr12	133037301	133059606	133037301	133059606	+	ENST00000543758.5@ZNF84	ENST00000543758.5	protein_coding	133037301,133041100,133047955,133048753,133056957	133037545,133041482,133048081,133048848,133059606	Gene ID= ENSG00000198040.10 TPM= 2.12 Transcript Type= protein_coding
chr12	133037506	133059606	133037506	133059606	+	transcript5850.chr12.nic@ZNF84	transcript5850.chr12.nic	protein_coding	133037506,133041278,133047955,133048753,133056954	133037554,133041482,133048081,133048848,133059606	Gene ID= ENSG00000198040.10 TPM= 7.44 Transcript Type= NA
chr12	133080415	133107428	133080415	133107428	+	transcript5855.chr12.nnic@ZNF140	transcript5855.chr12.nnic	protein_coding	133080415,133081273,133083103,133083466,133105510	133080551,133081329,133083229,133083561,133107428	Gene ID= ENSG00000196387.9 TPM= 3.19 Transcript Type= NA
chr12	133079838	133107544	133079838	133107544	+	ENST00000355557.6@ZNF140	ENST00000355557.6	protein_coding	133079838,133081273,133083103,133083466,133105510	133081072,133081329,133083229,133083561,133107544	Gene ID= ENSG00000196387.9 TPM= 5.31 Transcript Type= protein_coding
chr12	133106817	133130473	133106817	133130473	-	ENST00000537226.2@ZNF891	ENST00000537226.2	protein_coding	133130227,133106817	133130473,133122024	Gene ID= ENSG00000214029.4 TPM= 1.06 Transcript Type= protein_coding
chr12	133130573	133155598	133130573	133155598	+	transcript5861.chr12.nic@ZNF10	transcript5861.chr12.nic	protein_coding	133130573,133130837,133144434,133151028,133151809,133155503	133130754,133131014,133144525,133151154,133151904,133155598	Gene ID= ENSG00000256223.5 TPM= 3.19 Transcript Type= NA
chr12	133181409	133214831	133181409	133214831	+	ENST00000536435.6@ZNF268	ENST00000536435.6	protein_coding	133181409,133181946,133187872,133191489,133191908,133202144	133181686,133182030,133188072,133191615,133192003,133214831	Gene ID= ENSG00000090612.20 TPM= 1.06 Transcript Type= protein_coding
chr12	133181474	133205023	133181474	133205023	+	ENST00000228289.9@ZNF268	ENST00000228289.9	protein_coding	133181474,133181946,133187872,133191489,133191908,133202144	133181627,133182030,133188072,133191615,133192003,133205023	Gene ID= ENSG00000090612.20 TPM= 1.06 Transcript Type= protein_coding
chr12	133181559	133205173	133181559	133205173	+	ENST00000541009.6@ZNF268	ENST00000541009.6	protein_coding	133181559,133181946,133187872,133191489,133191908,133193428,133202144	133181686,133182030,133188072,133191615,133192003,133193533,133205173	Gene ID= ENSG00000090612.20 TPM= 1.06 Transcript Type= protein_coding
chr13	19601904	19646841	19601904	19646841	+	transcript10.chr13.nnic@MPHOSPH8	transcript10.chr13.nnic	protein_coding	19601904,19633620,19642115,19646443	19602155,19633961,19642270,19646841	Gene ID= ENSG00000196199.13 TPM= 19.65 Transcript Type= NA
chr13	19633681	19673459	19633681	19673459	+	ENST00000361479.9@MPHOSPH8	ENST00000361479.9	protein_coding	19633681,19642115,19646443,19648422,19650003,19658995,19659201,19661698,19663040,19666425,19668377,19670236,19671206,19671834	19633961,19642270,19647291,19648521,19650260,19659120,19659289,19661838,19663126,19666579,19668531,19670363,19671289,19673459	Gene ID= ENSG00000196199.13 TPM= 6.9 Transcript Type= protein_coding
chr13	19667991	19669622	19667991	19669622	+	transcript14.chr13.nnic@NA	transcript14.chr13.nnic	NA	19667991	19669622	Gene ID= novel_gene_chr13_15 TPM= 2.12 Transcript Type= NA
chr13	19702871	19783019	19702871	19783019	-	ENST00000619300.4@PSPC1	ENST00000619300.4	protein_coding	19782917,19782386,19772242,19759323,19751271,19741565,19730239,19709542,19705662,19702871	19783019,19782791,19772543,19759418,19751467,19741649,19730344,19709599,19705831,19703360	Gene ID= ENSG00000121390.18 TPM= 2.12 Transcript Type= protein_coding
chr13	19675389	19782941	19675389	19782941	-	transcript8.chr13.nic@PSPC1	transcript8.chr13.nic	protein_coding	19782386,19772242,19759323,19751271,19741565,19730239,19675389	19782941,19772543,19759418,19751467,19741649,19730344,19677823	Gene ID= ENSG00000121390.18 TPM= 3.19 Transcript Type= NA
chr13	19674756	19782917	19674756	19782917	-	ENST00000471658.5@PSPC1	ENST00000471658.5	protein_coding	19782386,19772242,19759323,19751271,19741565,19730239,19677724,19674756	19782917,19772543,19759418,19751467,19741649,19730344,19677823,19674984	Gene ID= ENSG00000121390.18 TPM= 4.25 Transcript Type= nonsense_mediated_decay
chr13	19675388	19782942	19675388	19782942	-	ENST00000492741.5@PSPC1	ENST00000492741.5	protein_coding	19782386,19772242,19759323,19751271,19741565,19730239,19677724,19675388	19782942,19772543,19759418,19751467,19741649,19730344,19677823,19675653	Gene ID= ENSG00000121390.18 TPM= 7.44 Transcript Type= nonsense_mediated_decay
chr13	19837465	19863524	19837465	19863524	-	ENST00000382905.8@ZMYM5	ENST00000382905.8	protein_coding	19863450,19862399,19851689,19851355,19838700,19837465	19863524,19862466,19852190,19851448,19838985,19837821	Gene ID= ENSG00000132950.18 TPM= 1.06 Transcript Type= protein_coding
chr13	19834169	19922865	19834169	19922865	+	transcript26.chr13.nnic@AL355001.1	transcript26.chr13.nnic	antisense_RNA	19834169,19883278,19922574	19835876,19883297,19922865	Gene ID= ENSG00000223576.2 TPM= 2.12 Transcript Type= NA
chr13	19863858	19865048	19863858	19865048	+	ENST00000620617.1@AL355001.2	ENST00000620617.1	lincRNA	19863858	19865048	Gene ID= ENSG00000275964.1 TPM= 3.19 Transcript Type= lincRNA
chr13	19958860	20086484	19958860	20086484	+	transcript31.chr13.nnic@ZMYM2	transcript31.chr13.nnic	protein_coding	19958860,19959958,19993063,20002850,20005074,20006374,20019547,20026612,20027203,20031319,20034254,20036737,20051433,20052277,20058575,20059447,20061053,20062846,20064451,20066851,20067239,20082016,20082781,20083656,20085822	19958959,19960026,19993919,20003135,20005239,20006586,20019618,20026762,20027318,20031435,20034404,20036909,20051598,20052311,20058704,20059562,20061224,20062971,20064545,20067019,20067390,20082130,20083032,20083776,20086484	Gene ID= ENSG00000121741.16 TPM= 6.37 Transcript Type= NA
chr13	19958988	20019963	19958988	20019963	+	transcript38.chr13.nnic@ZMYM2	transcript38.chr13.nnic	protein_coding	19958988,19959958,19993063,20002850,20005074,20006374,20019547	19959135,19960026,19993919,20003135,20005239,20006586,20019963	Gene ID= ENSG00000121741.16 TPM= 3.19 Transcript Type= NA
chr13	20021369	20024164	20021369	20024164	-	transcript39.chr13.nnic@NA	transcript39.chr13.nnic	NA	20021369	20024164	Gene ID= novel_gene_chr13_40 TPM= 5.31 Transcript Type= NA
chr13	20138255	20161049	20138255	20161049	-	ENST00000241125.3@GJA3	ENST00000241125.3	protein_coding	20160890,20138255	20161049,20143305	Gene ID= ENSG00000121743.3 TPM= 33.99 Transcript Type= protein_coding
chr13	20403671	20525877	20403671	20525877	-	transcript55.chr13.nnic@CRYL1	transcript55.chr13.nnic	protein_coding	20525754,20512443,20489370,20432102,20413282,20404635,20403671	20525877,20512550,20489496,20432296,20413387,20404741,20404242	Gene ID= ENSG00000165475.13 TPM= 4.78 Transcript Type= NA
chr13	20403667	20525857	20403667	20525857	-	ENST00000298248.11@CRYL1	ENST00000298248.11	protein_coding	20525754,20512443,20489370,20439593,20432102,20413282,20404635,20403667	20525857,20512550,20489496,20439754,20432296,20413387,20404741,20404242	Gene ID= ENSG00000165475.13 TPM= 37.71 Transcript Type= protein_coding
chr13	20567069	20691362	20567069	20691362	+	ENST00000351808.9@IFT88	ENST00000351808.9	protein_coding	20567069,20574380,20582957,20589811,20590967,20591618,20592335,20596150,20597015,20598651,20599451,20601705,20605035,20615793,20625750,20631016,20638332,20641290,20643455,20644843,20653876,20656365,20663498,20670973,20690705,20691054	20567256,20574475,20583019,20589867,20591020,20591681,20592404,20596240,20597119,20598753,20599565,20601933,20605105,20615879,20625849,20631102,20638518,20641398,20643605,20644958,20653928,20656430,20663604,20671039,20690815,20691362	Gene ID= ENSG00000032742.17 TPM= 8.5 Transcript Type= protein_coding
chr13	20567145	20567837	20567145	20567837	+	transcript65.chr13.nnic@NA	transcript65.chr13.nnic	NA	20567145	20567837	Gene ID= novel_gene_chr13_66 TPM= 2.12 Transcript Type= NA
chr13	20702128	20704375	20702128	20704375	-	transcript69.chr13.nnic@NA	transcript69.chr13.nnic	NA	20702128	20704375	Gene ID= novel_gene_chr13_70 TPM= 16.99 Transcript Type= NA
chr13	20773278	20774464	20773278	20774464	+	transcript76.chr13.nnic@NA	transcript76.chr13.nnic	NA	20773278	20774464	Gene ID= novel_gene_chr13_77 TPM= 3.19 Transcript Type= NA
chr13	20773295	20775641	20773295	20775641	+	transcript78.chr13.nnic@NA	transcript78.chr13.nnic	NA	20773295	20775641	Gene ID= novel_gene_chr13_79 TPM= 2.12 Transcript Type= NA
chr13	20777329	20902810	20777329	20902810	-	ENST00000255305.10@XPO4	ENST00000255305.10	protein_coding	20902670,20868596,20862717,20855627,20843770,20842895,20827067,20822132,20821704,20809791,20809083,20808436,20807457,20800831,20800156,20799165,20796764,20796076,20790462,20788486,20787481,20786965,20777329	20902810,20868701,20862858,20855765,20843886,20843048,20827179,20822289,20821878,20809967,20809225,20808581,20807634,20800990,20800325,20799339,20797057,20796256,20790580,20788616,20787598,20787057,20783919	Gene ID= ENSG00000132953.16 TPM= 4.25 Transcript Type= protein_coding
chr13	20811144	20812544	20811144	20812544	+	transcript100.chr13.nnic@NA	transcript100.chr13.nnic	NA	20811144	20812544	Gene ID= novel_gene_chr13_101 TPM= 3.19 Transcript Type= NA
chr13	20850472	20853350	20850472	20853350	+	transcript102.chr13.nnic@NA	transcript102.chr13.nnic	NA	20850472	20853350	Gene ID= novel_gene_chr13_103 TPM= 5.31 Transcript Type= NA
chr13	20973032	21061547	20973032	21061547	-	ENST00000382592.4@LATS2	ENST00000382592.4	protein_coding	21061346,21045685,20991272,20987881,20983224,20981466,20979691,20973032	21061547,21046230,20991404,20989304,20983806,20981648,20979797,20975364	Gene ID= ENSG00000150457.8 TPM= 14.87 Transcript Type= protein_coding
chr13	20993067	20994865	20993067	20994865	+	transcript106.chr13.nnic@NA	transcript106.chr13.nnic	NA	20993067	20994865	Gene ID= novel_gene_chr13_107 TPM= 2.12 Transcript Type= NA
chr13	21140886	21147603	21140886	21147603	+	ENST00000467636.1@SAP18	ENST00000467636.1	protein_coding	21140886,21146805,21147167	21140995,21146927,21147603	Gene ID= ENSG00000150459.12 TPM= 1.06 Transcript Type= protein_coding
chr13	21176655	21177512	21176655	21177512	+	transcript122.chr13.nnic@MRPL57	transcript122.chr13.nnic	protein_coding	21176655,21176862	21176717,21177512	Gene ID= ENSG00000173141.4 TPM= 7.44 Transcript Type= NA
chr13	21176645	21179084	21176645	21179084	+	ENST00000309594.4@MRPL57	ENST00000309594.4	protein_coding	21176645,21176912	21176717,21179084	Gene ID= ENSG00000173141.4 TPM= 12.75 Transcript Type= protein_coding
chr13	21372573	21459369	21372573	21459369	-	ENST00000382466.7@ZDHHC20	ENST00000382466.7	protein_coding	21459054,21425652,21421061,21413652,21402797,21401653,21400373,21391722,21387508,21382920,21381434,21372573	21459369,21425678,21421164,21413772,21402866,21401685,21400493,21391854,21387634,21383009,21381546,21376655	Gene ID= ENSG00000180776.15 TPM= 6.37 Transcript Type= protein_coding
chr13	21492700	21604214	21492700	21604214	-	ENST00000382374.8@MICU2	ENST00000382374.8	protein_coding	21603939,21566797,21539657,21539302,21522603,21521245,21514353,21510004,21502926,21496052,21495161,21492700	21604214,21566944,21539688,21539377,21522650,21521327,21514418,21510101,21503097,21496160,21495318,21493353	Gene ID= ENSG00000165487.13 TPM= 75.41 Transcript Type= protein_coding
chr13	21674085	21702597	21674085	21702597	+	transcript140.chr13.nnic@FGF9	transcript140.chr13.nnic	protein_coding	21674085,21681042,21701190	21674308,21681145,21702597	Gene ID= ENSG00000102678.6 TPM= 3.19 Transcript Type= NA
chr13	22210285	22276521	22210285	22276521	+	ENST00000616974.1@LINC00540	ENST00000616974.1	lincRNA	22210285,22274523	22210428,22276521	Gene ID= ENSG00000276476.2 TPM= 3.19 Transcript Type= lincRNA
chr13	23180973	23325165	23180973	23325165	+	transcript145.chr13.nnic@SGCG	transcript145.chr13.nnic	protein_coding	23180973,23203695,23234611,23250630,23279359,23295415,23310108,23320637,23324368	23181075,23203889,23234712,23250717,23279478,23295487,23310249,23320760,23325165	Gene ID= ENSG00000102683.7 TPM= 3.19 Transcript Type= NA
chr13	23180912	23325165	23180912	23325165	+	transcript146.chr13.nnic@SGCG	transcript146.chr13.nnic	protein_coding	23180912,23191247,23203695,23234611,23250630,23279359,23295415,23320637,23324368	23181075,23191397,23203889,23234712,23250717,23279478,23295487,23320760,23325165	Gene ID= ENSG00000102683.7 TPM= 6.37 Transcript Type= NA
chr13	23180952	23325165	23180952	23325165	+	ENST00000218867.3@SGCG	ENST00000218867.3	protein_coding	23180952,23203695,23234611,23250630,23279359,23295415,23320637,23324368	23181075,23203889,23234712,23250717,23279478,23295487,23320760,23325165	Gene ID= ENSG00000102683.7 TPM= 89.22 Transcript Type= protein_coding
chr13	23730189	23889419	23730189	23889419	-	ENST00000382172.3@MIPEP	ENST00000382172.3	protein_coding	23889132,23886333,23881699,23879268,23874846,23870013,23869292,23864141,23862302,23858860,23841335,23839649,23837552,23836240,23809850,23805950,23760096,23756545,23730189	23889419,23886506,23881787,23879354,23874909,23870195,23869448,23864189,23862362,23858912,23841488,23839726,23837756,23836349,23809924,23806069,23760217,23756618,23730445	Gene ID= ENSG00000027001.9 TPM= 48.86 Transcript Type= protein_coding
chr13	24270687	24307074	24270687	24307074	+	ENST00000343003.10@SPATA13	ENST00000343003.10	protein_coding	24270687,24278614,24284135,24286214,24286765,24288999,24290652,24294739,24297363,24300401,24302598	24270912,24278821,24284271,24286393,24286950,24289178,24290884,24294868,24297735,24300475,24307074	Gene ID= ENSG00000182957.15 TPM= 1.06 Transcript Type= protein_coding
chr13	24420926	24512810	24420926	24512810	-	ENST00000381989.3@PARP4	ENST00000381989.3	protein_coding	24512706,24503645,24501633,24500316,24499301,24498116,24494573,24493596,24492421,24490668,24486168,24484653,24478093,24477701,24475472,24469894,24469024,24459972,24459264,24459044,24456341,24455017,24453587,24452406,24449718,24447016,24446681,24443650,24442590,24441846,24434395,24431377,24426466,24420926	24512810,24503777,24501834,24500382,24499376,24498229,24494722,24493733,24492594,24490828,24486305,24484748,24478276,24477857,24475596,24470025,24469110,24460136,24459310,24459122,24456478,24455212,24453654,24452593,24449817,24447186,24446761,24443730,24442685,24441968,24435474,24431476,24426598,24421314	Gene ID= ENSG00000102699.5 TPM= 14.87 Transcript Type= protein_coding
chr13	24883033	24922880	24883033	24922880	-	ENST00000381884.8@CENPJ	ENST00000381884.8	protein_coding	24922761,24912582,24911946,24909790,24908018,24907091,24905346,24903926,24899419,24892643,24889316,24885606,24885276,24884323,24884161,24883963,24883033	24922880,24913091,24912069,24910086,24908126,24907193,24906960,24904058,24899584,24892867,24889400,24885670,24885386,24884463,24884245,24884083,24883369	Gene ID= ENSG00000151849.14 TPM= 2.12 Transcript Type= protein_coding
chr13	25246201	25288009	25246201	25288009	-	ENST00000381801.5@MTMR6	ENST00000381801.5	protein_coding	25287224,25274071,25267779,25266129,25265819,25261668,25258560,25257736,25257196,25254385,25253764,25251853,25251649,25246201	25288009,25274187,25267941,25266286,25265947,25261802,25258692,25257845,25257321,25254434,25253964,25251984,25251775,25249492	Gene ID= ENSG00000139505.11 TPM= 2.12 Transcript Type= protein_coding
chr13	25301524	25342416	25301524	25342416	+	ENST00000381736.7@NUP58	ENST00000381736.7	protein_coding	25301524,25307806,25309247,25312883,25313614,25315357,25319326,25320530,25320919,25324989,25326916,25327430,25331357,25336936,25338636,25339965	25301880,25307948,25309282,25313032,25313751,25315467,25319350,25320595,25321093,25325068,25327034,25327512,25331558,25337034,25338731,25342416	Gene ID= ENSG00000139496.15 TPM= 15.93 Transcript Type= protein_coding
chr13	25311674	25316214	25311674	25316214	+	transcript200.chr13.nic@NUP58	transcript200.chr13.nic	protein_coding	25311674,25313614,25315357	25313032,25313751,25316214	Gene ID= ENSG00000139496.15 TPM= 2.12 Transcript Type= NA
chr13	25301631	25336340	25301631	25336340	+	ENST00000463407.5@NUP58	ENST00000463407.5	protein_coding	25301631,25307806,25309247,25312883,25313614,25315357,25319326,25320530,25320919,25324989,25326916,25327430,25331357	25301880,25307948,25309282,25313032,25313751,25315467,25319350,25320595,25321093,25325068,25327034,25327512,25336340	Gene ID= ENSG00000139496.15 TPM= 1.06 Transcript Type= protein_coding
chr13	26212778	26221842	26212778	26221842	-	transcript202.chr13.nnic@RNF6	transcript202.chr13.nnic	protein_coding	26221782,26221248,26219457,26218511,26215474,26212778	26221842,26221330,26219667,26218606,26215592,26214769	Gene ID= ENSG00000127870.16 TPM= 2.97 Transcript Type= NA
chr13	26212778	26222319	26212778	26222319	-	transcript204.chr13.nnic@RNF6	transcript204.chr13.nnic	protein_coding	26222003,26221248,26219457,26218511,26215474,26212778	26222319,26221330,26219667,26218606,26215592,26214769	Gene ID= ENSG00000127870.16 TPM= 4.04 Transcript Type= NA
chr13	26212775	26222289	26212775	26222289	-	transcript208.chr13.nic@RNF6	transcript208.chr13.nic	protein_coding	26221835,26221248,26219457,26218511,26212775	26222289,26221330,26219667,26218606,26215592	Gene ID= ENSG00000127870.16 TPM= 3.69 Transcript Type= NA
chr13	26212768	26222493	26212768	26222493	-	ENST00000381588.8@RNF6	ENST00000381588.8	protein_coding	26222003,26221248,26219457,26218511,26212768	26222493,26221330,26219667,26218606,26215592	Gene ID= ENSG00000127870.16 TPM= 28.12 Transcript Type= protein_coding
chr13	26212762	26221842	26212762	26221842	-	ENST00000346166.7@RNF6	ENST00000346166.7	protein_coding	26221782,26221248,26219457,26218511,26212762	26221842,26221330,26219667,26218606,26215592	Gene ID= ENSG00000127870.16 TPM= 21.74 Transcript Type= protein_coding
chr13	26254123	26405238	26254123	26405238	+	transcript211.chr13.nic@CDK8	transcript211.chr13.nic	protein_coding	26254123,26337567,26349072,26353740,26382814,26385211,26393367,26396285,26397153,26400453,26401269,26401469,26403956	26254769,26337642,26349182,26353880,26382871,26385342,26393510,26396354,26397225,26400550,26401347,26401624,26405238	Gene ID= ENSG00000132964.11 TPM= 6.9 Transcript Type= NA
chr13	26254139	26405238	26254139	26405238	+	ENST00000381527.7@CDK8	ENST00000381527.7	protein_coding	26254139,26337567,26349072,26353740,26382814,26385211,26393367,26396285,26397153,26400453,26401269,26401466,26403956	26254769,26337642,26349182,26353880,26382871,26385342,26393510,26396354,26397225,26400550,26401347,26401624,26405238	Gene ID= ENSG00000132964.11 TPM= 16.46 Transcript Type= protein_coding
chr13	26682609	26688943	26682609	26688943	+	transcript214.chr13.nic@WASF3	transcript214.chr13.nic	protein_coding	26682609,26685688	26682974,26688943	Gene ID= ENSG00000132970.12 TPM= 6.37 Transcript Type= NA
chr13	27066142	27171896	27066142	27171896	-	ENST00000282344.10@USP12	ENST00000282344.10	protein_coding	27171592,27116516,27105731,27095601,27090082,27089883,27075191,27071071,27066142	27171896,27116596,27105944,27095830,27090158,27089966,27075388,27071149,27069384	Gene ID= ENSG00000152484.13 TPM= 33.99 Transcript Type= protein_coding
chr13	27107101	27109924	27107101	27109924	+	transcript220.chr13.nnic@NA	transcript220.chr13.nnic	NA	27107101	27109924	Gene ID= novel_gene_chr13_221 TPM= 2.12 Transcript Type= NA
chr13	27251309	27256568	27251309	27256568	+	ENST00000311549.10@RPL21	ENST00000311549.10	protein_coding	27251309,27253765,27254220,27255242,27256184,27256436	27251585,27253843,27254281,27255354,27256334,27256568	Gene ID= ENSG00000122026.10 TPM= 111.53 Transcript Type= protein_coding
chr13	27251583	27256568	27251583	27256568	+	ENST00000319826.8@RPL21	ENST00000319826.8	protein_coding	27251583,27253765,27254220,27255242,27256184,27256436	27251850,27253843,27254281,27255354,27256334,27256568	Gene ID= ENSG00000122026.10 TPM= 7.44 Transcript Type= protein_coding
chr13	27251579	27256568	27251579	27256568	+	ENST00000272274.8@RPL21	ENST00000272274.8	protein_coding	27251579,27253765,27254220,27255242,27256184,27256436	27251656,27253843,27254281,27255354,27256334,27256568	Gene ID= ENSG00000122026.10 TPM= 9.56 Transcript Type= protein_coding
chr13	27424544	27435688	27424544	27435688	+	ENST00000381140.8@GTF3A	ENST00000381140.8	protein_coding	27424544,27427092,27429870,27430533,27432731,27434139,27434805,27435133,27435433	27424938,27427192,27429966,27430621,27432804,27434219,27435034,27435192,27435688	Gene ID= ENSG00000122034.14 TPM= 347.54 Transcript Type= protein_coding
chr13	27424662	27435688	27424662	27435688	+	ENST00000419181.5@GTF3A	ENST00000419181.5	protein_coding	27424662,27427092,27429870,27430533,27434139,27434805,27435133,27435433	27424938,27427192,27429966,27430621,27434219,27435034,27435192,27435688	Gene ID= ENSG00000122034.14 TPM= 15.88 Transcript Type= nonsense_mediated_decay
chr13	27435643	27450604	27435643	27450604	-	transcript249.chr13.nic@MTIF3	transcript249.chr13.nic	protein_coding	27450509,27445088,27441017,27439989,27437116,27435643	27450604,27445156,27441077,27440449,27437273,27435893	Gene ID= ENSG00000122033.14 TPM= 7.65 Transcript Type= NA
chr13	27435643	27450587	27435643	27450587	-	transcript255.chr13.nic@MTIF3	transcript255.chr13.nic	protein_coding	27450509,27445088,27439989,27437116,27435643	27450587,27445137,27440449,27437273,27435893	Gene ID= ENSG00000122033.14 TPM= 5.52 Transcript Type= NA
chr13	27435643	27450184	27435643	27450184	-	transcript256.chr13.nic@MTIF3	transcript256.chr13.nic	protein_coding	27450064,27445088,27439989,27437116,27435643	27450184,27445156,27440449,27437273,27435893	Gene ID= ENSG00000122033.14 TPM= 16.14 Transcript Type= NA
chr13	27435643	27450393	27435643	27450393	-	transcript257.chr13.nic@MTIF3	transcript257.chr13.nic	protein_coding	27450142,27445088,27439989,27437116,27435643	27450393,27445156,27440449,27437273,27435893	Gene ID= ENSG00000122033.14 TPM= 7.65 Transcript Type= NA
chr13	27440281	27450604	27440281	27450604	-	transcript271.chr13.nic@MTIF3	transcript271.chr13.nic	protein_coding	27450509,27445088,27440281	27450604,27445156,27440449	Gene ID= ENSG00000122033.14 TPM= 2.12 Transcript Type= NA
chr13	27435643	27450574	27435643	27450574	-	ENST00000381120.7@MTIF3	ENST00000381120.7	protein_coding	27450509,27445088,27439989,27437116,27435643	27450574,27445156,27440449,27437273,27435893	Gene ID= ENSG00000122033.14 TPM= 49.07 Transcript Type= protein_coding
chr13	27435684	27450131	27435684	27450131	-	ENST00000461838.5@MTIF3	ENST00000461838.5	protein_coding	27450064,27445088,27439989,27437116,27435684	27450131,27445137,27440449,27437273,27435893	Gene ID= ENSG00000122033.14 TPM= 14.87 Transcript Type= processed_transcript
chr13	27437145	27450164	27437145	27450164	-	ENST00000493719.5@MTIF3	ENST00000493719.5	protein_coding	27450064,27445088,27439989,27437145	27450164,27445156,27440449,27437273	Gene ID= ENSG00000122033.14 TPM= 1.06 Transcript Type= processed_transcript
chr13	27440281	27450199	27440281	27450199	-	ENST00000464753.1@MTIF3	ENST00000464753.1	protein_coding	27450142,27445088,27440281	27450199,27445156,27440449	Gene ID= ENSG00000122033.14 TPM= 1.06 Transcript Type= processed_transcript
chr13	27545911	27620542	27545911	27620542	-	transcript272.chr13.nnic@LNX2	transcript272.chr13.nnic	protein_coding	27620018,27581297,27569029,27567640,27562413,27559842,27556236,27553208,27550333,27545911	27620542,27581803,27569276,27567839,27562781,27559985,27556413,27553439,27550491,27548470	Gene ID= ENSG00000139517.7 TPM= 8.5 Transcript Type= NA
chr13	27620762	27623452	27620762	27623452	+	transcript280.chr13.nic@POLR1D	transcript280.chr13.nic	protein_coding	27620762,27621337,27622875	27621140,27622009,27623452	Gene ID= ENSG00000186184.16 TPM= 21.77 Transcript Type= NA
chr13	27620779	27623452	27620779	27623452	+	transcript281.chr13.nic@POLR1D	transcript281.chr13.nic	protein_coding	27620779,27621337,27622875	27621104,27622009,27623452	Gene ID= ENSG00000186184.16 TPM= 15.4 Transcript Type= NA
chr13	27620881	27623447	27620881	27623447	+	transcript285.chr13.nnic@NA	transcript285.chr13.nnic	NA	27620881	27623447	Gene ID= novel_gene_chr13_286 TPM= 2.12 Transcript Type= NA
chr13	28136845	28139099	28136845	28139099	-	transcript290.chr13.nnic@PAN3-AS1	transcript290.chr13.nnic	antisense_RNA	28138547,28136845	28139099,28138405	Gene ID= ENSG00000261485.1 TPM= 2.12 Transcript Type= NA
chr13	28206740	28209787	28206740	28209787	-	transcript291.chr13.nnic@NA	transcript291.chr13.nnic	NA	28206740	28209787	Gene ID= novel_gene_chr13_292 TPM= 2.12 Transcript Type= NA
chr13	28385647	28389103	28385647	28389103	-	transcript299.chr13.nnic@NA	transcript299.chr13.nnic	NA	28385647	28389103	Gene ID= novel_gene_chr13_300 TPM= 2.12 Transcript Type= NA
chr13	28659104	28678925	28659104	28678925	+	ENST00000380842.4@POMP	ENST00000380842.4	protein_coding	28659104,28662410,28664509,28668473,28672339,28678035	28659187,28662507,28664569,28668574,28672432,28678925	Gene ID= ENSG00000132963.7 TPM= 10.62 Transcript Type= protein_coding
chr13	28700080	28718841	28700080	28718841	-	ENST00000266943.10@SLC46A3	ENST00000266943.10	protein_coding	28718496,28717810,28712680,28710760,28703943,28700080	28718841,28718022,28713550,28710843,28704099,28701581	Gene ID= ENSG00000139508.14 TPM= 7.44 Transcript Type= protein_coding
chr13	29428749	29499477	29428749	29499477	+	transcript323.chr13.nnic@MTUS2	transcript323.chr13.nnic	protein_coding	29428749,29439983,29480150,29487900,29492646,29497238,29498418,29498795	29428896,29440049,29480364,29488005,29492719,29497336,29498537,29499477	Gene ID= ENSG00000132938.19 TPM= 3.19 Transcript Type= NA
chr13	29428627	29503736	29428627	29503736	+	ENST00000380808.6@MTUS2	ENST00000380808.6	protein_coding	29428627,29439983,29480150,29487900,29492646,29497238,29498418,29501097,29502993	29428896,29440049,29480364,29488005,29492719,29497336,29498537,29501194,29503736	Gene ID= ENSG00000132938.19 TPM= 84.97 Transcript Type= protein_coding
chr13	29489335	29595475	29489335	29595475	-	transcript333.chr13.nnic@SLC7A1	transcript333.chr13.nnic	protein_coding	29595144,29553761,29492554,29489335	29595475,29553860,29492665,29490845	Gene ID= ENSG00000139514.12 TPM= 2.12 Transcript Type= NA
chr13	29509410	29595688	29509410	29595688	-	ENST00000380752.9@SLC7A1	ENST00000380752.9	protein_coding	29595416,29553761,29535819,29532824,29530538,29524132,29523266,29522317,29519447,29517573,29517144,29516138,29509410	29595688,29553860,29536202,29532982,29530712,29524253,29523488,29522456,29519549,29517790,29517310,29516246,29514583	Gene ID= ENSG00000139514.12 TPM= 46.74 Transcript Type= protein_coding
chr13	29593765	29595784	29593765	29595784	-	transcript337.chr13.nnic@NA	transcript337.chr13.nnic	NA	29593765	29595784	Gene ID= novel_gene_chr13_338 TPM= 2.12 Transcript Type= NA
chr13	29764371	29850684	29764371	29850684	-	ENST00000380680.4@UBL3	ENST00000380680.4	protein_coding	29849512,29777155,29772112,29767618,29764371	29850684,29777263,29772198,29767695,29767307	Gene ID= ENSG00000122042.9 TPM= 35.05 Transcript Type= protein_coding
chr13	30208040	30307036	30208040	30307036	-	transcript352.chr13.nnic@KATNAL1	transcript352.chr13.nnic	protein_coding	30306679,30283616,30280063,30255447,30240959,30240460,30231314,30230468,30227412,30210316,30208040	30307036,30283791,30280223,30255615,30241086,30240565,30231472,30230594,30227546,30210442,30208738	Gene ID= ENSG00000102781.13 TPM= 5.31 Transcript Type= NA
chr13	30208480	30307026	30208480	30307026	-	ENST00000380617.7@KATNAL1	ENST00000380617.7	protein_coding	30306940,30283616,30280063,30255447,30240959,30240460,30231314,30230468,30227412,30210316,30208480	30307026,30283791,30280223,30255615,30241086,30240565,30231472,30230594,30227546,30210442,30208738	Gene ID= ENSG00000102781.13 TPM= 3.19 Transcript Type= protein_coding
chr13	30456704	30465965	30456704	30465965	-	ENST00000341423.9@HMGB1	ENST00000341423.9	protein_coding	30465796,30463531,30463207,30462538,30456704	30465965,30463694,30463352,30462712,30461533	Gene ID= ENSG00000189403.14 TPM= 53.64 Transcript Type= protein_coding
chr13	30460907	30464879	30460907	30464879	-	transcript390.chr13.nic@HMGB1	transcript390.chr13.nic	protein_coding	30463531,30463207,30462538,30460907	30464879,30463352,30462712,30461533	Gene ID= ENSG00000189403.14 TPM= 5.31 Transcript Type= NA
chr13	30460907	30465242	30460907	30465242	-	ENST00000399494.5@HMGB1	ENST00000399494.5	protein_coding	30465073,30463531,30463207,30462538,30460907	30465242,30463694,30463352,30462712,30461533	Gene ID= ENSG00000189403.14 TPM= 12.75 Transcript Type= protein_coding
chr13	30735508	30764426	30735508	30764426	+	ENST00000380490.4@ALOX5AP	ENST00000380490.4	protein_coding	30735508,30744060,30752052,30755944,30763944	30735675,30744159,30752122,30756025,30764426	Gene ID= ENSG00000132965.9 TPM= 2.12 Transcript Type= protein_coding
chr13	30906191	30925572	30906191	30925572	+	ENST00000380482.8@MEDAG	ENST00000380482.8	protein_coding	30906191,30917403,30921014,30921561,30924311	30906793,30917512,30921126,30921846,30925572	Gene ID= ENSG00000102802.9 TPM= 31.86 Transcript Type= protein_coding
chr13	31136625	31161975	31136625	31161975	-	transcript409.chr13.nic@HSPH1	transcript409.chr13.nic	protein_coding	31161476,31158806,31155514,31154633,31152852,31151609,31150947,31149954,31148374,31147959,31145563,31143792,31141122,31140184,31139000,31138781,31138407,31137368,31136625	31161975,31158863,31155654,31154755,31152951,31151742,31151191,31150182,31148480,31148092,31145768,31143923,31141259,31140309,31139107,31138900,31138568,31137524,31137117	Gene ID= ENSG00000120694.19 TPM= 9.56 Transcript Type= NA
chr13	31136625	31162388	31136625	31162388	-	ENST00000630972.2@HSPH1	ENST00000630972.2	protein_coding	31161982,31158806,31155514,31154633,31152852,31151609,31150947,31149954,31148374,31147959,31145563,31143792,31141122,31140184,31139000,31138781,31138407,31136625	31162388,31158863,31155654,31154755,31152951,31151742,31151191,31150182,31148480,31148092,31145768,31143923,31141259,31140309,31139107,31138900,31138568,31137524	Gene ID= ENSG00000120694.19 TPM= 5.84 Transcript Type= protein_coding
chr13	31140277	31162030	31140277	31162030	-	transcript425.chr13.nic@HSPH1	transcript425.chr13.nic	protein_coding	31161476,31158806,31155514,31154633,31152852,31151609,31150947,31149954,31148374,31147959,31145563,31141122,31140277	31162030,31158863,31155654,31154755,31152951,31151742,31151191,31150182,31148480,31148092,31145768,31141259,31140309	Gene ID= ENSG00000120694.19 TPM= 9.82 Transcript Type= NA
chr13	31136628	31161927	31136628	31161927	-	ENST00000380405.7@HSPH1	ENST00000380405.7	protein_coding	31161476,31158806,31155514,31154633,31152852,31151609,31150947,31149954,31148374,31147959,31145563,31141122,31140184,31139000,31138781,31138407,31136628	31161927,31158863,31155654,31154755,31152951,31151742,31151191,31150182,31148480,31148092,31145768,31141259,31140309,31139107,31138900,31138568,31137524	Gene ID= ENSG00000120694.19 TPM= 7.97 Transcript Type= protein_coding
chr13	31199936	31332276	31199936	31332276	+	ENST00000343307.4@B3GLCT	ENST00000343307.4	protein_coding	31199936,31215051,31222952,31229185,31247023,31247855,31260946,31269214,31274509,31276702,31284648,31286720,31317566,31323751,31329501	31200154,31215100,31222991,31229294,31247099,31247966,31261082,31269277,31274628,31276771,31284761,31286819,31317685,31323895,31332276	Gene ID= ENSG00000187676.7 TPM= 4.25 Transcript Type= protein_coding
chr13	31846723	31962548	31846723	31962548	+	transcript461.chr13.nnic@EEF1DP3	transcript461.chr13.nnic	transcribed_unprocessed_pseudogene	31846723,31941308,31946009,31959483	31846939,31941366,31946181,31962548	Gene ID= ENSG00000229715.4 TPM= 3.72 Transcript Type= NA
chr13	31846682	31954680	31846682	31954680	+	transcript465.chr13.nnic@EEF1DP3	transcript465.chr13.nnic	transcribed_unprocessed_pseudogene	31846682,31946009,31952495	31846939,31946181,31954680	Gene ID= ENSG00000229715.4 TPM= 4.25 Transcript Type= NA
chr13	31846682	31962548	31846682	31962548	+	transcript467.chr13.nnic@EEF1DP3	transcript467.chr13.nnic	transcribed_unprocessed_pseudogene	31846682,31946009,31959483	31846939,31946181,31962548	Gene ID= ENSG00000229715.4 TPM= 5.84 Transcript Type= NA
chr13	31846682	31963738	31846682	31963738	+	transcript468.chr13.nnic@EEF1DP3	transcript468.chr13.nnic	transcribed_unprocessed_pseudogene	31846682,31946009,31962954	31846939,31946181,31963738	Gene ID= ENSG00000229715.4 TPM= 20.71 Transcript Type= NA
chr13	31846786	32082238	31846786	32082238	+	transcript470.chr13.nnic@EEF1DP3	transcript470.chr13.nnic	transcribed_unprocessed_pseudogene	31846786,31946009,32078834	31846939,31946181,32082238	Gene ID= ENSG00000229715.4 TPM= 2.12 Transcript Type= NA
chr13	31846770	31963738	31846770	31963738	+	transcript471.chr13.nnic@EEF1DP3	transcript471.chr13.nnic	transcribed_unprocessed_pseudogene	31846770,31946009,31962954	31846989,31946181,31963738	Gene ID= ENSG00000229715.4 TPM= 2.66 Transcript Type= NA
chr13	31859933	31863503	31859933	31863503	-	transcript482.chr13.nnic@NA	transcript482.chr13.nnic	NA	31859933	31863503	Gene ID= novel_gene_chr13_483 TPM= 2.12 Transcript Type= NA
chr13	31903059	31905740	31903059	31905740	+	transcript474.chr13.nnic@NA	transcript474.chr13.nnic	NA	31903059	31905740	Gene ID= novel_gene_chr13_475 TPM= 2.12 Transcript Type= NA
chr13	31948722	31952530	31948722	31952530	-	transcript476.chr13.nnic@NA	transcript476.chr13.nnic	NA	31948722	31952530	Gene ID= novel_gene_chr13_477 TPM= 8.5 Transcript Type= NA
chr13	31962931	31965572	31962931	31965572	-	transcript478.chr13.nnic@NA	transcript478.chr13.nnic	NA	31962931	31965572	Gene ID= novel_gene_chr13_479 TPM= 15.93 Transcript Type= NA
chr13	31976204	31979273	31976204	31979273	-	transcript480.chr13.nnic@NA	transcript480.chr13.nnic	NA	31976204	31979273	Gene ID= novel_gene_chr13_481 TPM= 4.25 Transcript Type= NA
chr13	32254122	32296613	32254122	32296613	+	transcript448.chr13.nnic@FRY	transcript448.chr13.nnic	protein_coding	32254122,32261616,32262314,32265450,32267170,32274842,32276464,32278465,32287867,32289633,32294368,32295202	32254394,32261816,32262475,32265616,32267359,32274991,32276562,32278548,32287884,32289743,32294570,32296613	Gene ID= ENSG00000073910.20 TPM= 5.84 Transcript Type= NA
chr13	32254122	32278836	32254122	32278836	+	transcript452.chr13.nic@FRY	transcript452.chr13.nic	protein_coding	32254122,32261616,32262314,32265450,32267170,32274842,32276464,32278465	32254394,32261816,32262475,32265616,32267359,32274991,32276562,32278836	Gene ID= ENSG00000073910.20 TPM= 4.25 Transcript Type= NA
chr13	32315505	32333291	32315505	32333291	+	ENST00000530893.6@BRCA2	ENST00000530893.6	protein_coding	32315505,32316422,32319077,32325076,32326101,32326242,32326499,32329443,32330919,32332272	32315667,32316523,32319325,32325184,32326150,32326282,32326613,32329492,32331030,32333291	Gene ID= ENSG00000139618.14 TPM= 1.06 Transcript Type= processed_transcript
chr13	32400724	32428178	32400724	32428178	-	ENST00000380130.6@N4BP2L1	ENST00000380130.6	protein_coding	32427904,32407645,32407250,32404321,32400724	32428178,32407772,32407338,32404397,32403200	Gene ID= ENSG00000139597.17 TPM= 1.06 Transcript Type= protein_coding
chr13	32432787	32538825	32432787	32538825	-	transcript490.chr13.nic@N4BP2L2	transcript490.chr13.nic	protein_coding	32538618,32535769,32527408,32522182,32521373,32517857,32442388,32438652,32436361,32432787	32538825,32537027,32527532,32522270,32521449,32518003,32444126,32438737,32436405,32432972	Gene ID= ENSG00000244754.8 TPM= 5.31 Transcript Type= NA
chr13	32432787	32538825	32432787	32538825	-	transcript491.chr13.nnic@N4BP2L2	transcript491.chr13.nnic	protein_coding	32538683,32535769,32527408,32522182,32521373,32517857,32442388,32438652,32436361,32432787	32538825,32537027,32527532,32522270,32521449,32518003,32444126,32438737,32436405,32432972	Gene ID= ENSG00000244754.8 TPM= 5.31 Transcript Type= NA
chr13	32444062	32538823	32444062	32538823	-	transcript494.chr13.nic@N4BP2L2	transcript494.chr13.nic	protein_coding	32538778,32538618,32535769,32527408,32522182,32521373,32517857,32444062	32538823,32538684,32537027,32527532,32522270,32521449,32518003,32444126	Gene ID= ENSG00000244754.8 TPM= 4.78 Transcript Type= NA
chr13	32443697	32538833	32443697	32538833	-	ENST00000505213.5@N4BP2L2	ENST00000505213.5	protein_coding	32538618,32535769,32527408,32522182,32521373,32517857,32443697	32538833,32537027,32527532,32522270,32521449,32518003,32444126	Gene ID= ENSG00000244754.8 TPM= 3.19 Transcript Type= protein_coding
chr13	32517624	32538823	32517624	32538823	-	transcript502.chr13.nic@N4BP2L2	transcript502.chr13.nic	protein_coding	32538778,32538618,32535769,32527408,32522182,32521373,32517624	32538823,32538684,32537027,32527532,32522270,32521449,32518003	Gene ID= ENSG00000244754.8 TPM= 2.12 Transcript Type= NA
chr13	32516894	32538825	32516894	32538825	-	transcript506.chr13.nnic@N4BP2L2	transcript506.chr13.nnic	protein_coding	32538683,32535769,32527408,32522182,32521373,32516894	32538825,32537027,32527532,32522270,32521449,32518003	Gene ID= ENSG00000244754.8 TPM= 3.54 Transcript Type= NA
chr13	32517624	32538819	32517624	32538819	-	transcript509.chr13.nic@N4BP2L2	transcript509.chr13.nic	protein_coding	32538778,32535769,32527408,32522182,32521373,32517624	32538819,32537027,32527532,32522270,32521449,32518003	Gene ID= ENSG00000244754.8 TPM= 2.12 Transcript Type= NA
chr13	32526819	32538825	32526819	32538825	-	transcript520.chr13.nic@N4BP2L2	transcript520.chr13.nic	protein_coding	32538618,32535769,32526819	32538825,32537027,32527532	Gene ID= ENSG00000244754.8 TPM= 2.12 Transcript Type= NA
chr13	32526819	32538825	32526819	32538825	-	transcript521.chr13.nnic@N4BP2L2	transcript521.chr13.nnic	protein_coding	32538683,32535769,32526819	32538825,32537027,32527532	Gene ID= ENSG00000244754.8 TPM= 3.19 Transcript Type= NA
chr13	32533516	32538825	32533516	32538825	-	transcript525.chr13.nic@N4BP2L2	transcript525.chr13.nic	protein_coding	32538618,32533516	32538825,32537027	Gene ID= ENSG00000244754.8 TPM= 4.25 Transcript Type= NA
chr13	32533516	32538825	32533516	32538825	-	transcript526.chr13.nnic@N4BP2L2	transcript526.chr13.nnic	protein_coding	32538683,32533516	32538825,32537027	Gene ID= ENSG00000244754.8 TPM= 2.12 Transcript Type= NA
chr13	32516871	32520370	32516871	32520370	+	transcript531.chr13.nnic@NA	transcript531.chr13.nnic	NA	32516871	32520370	Gene ID= novel_gene_chr13_532 TPM= 4.25 Transcript Type= NA
chr13	32522735	32526046	32522735	32526046	+	transcript529.chr13.nnic@NA	transcript529.chr13.nnic	NA	32522735	32526046	Gene ID= novel_gene_chr13_530 TPM= 22.31 Transcript Type= NA
chr13	32775880	32777155	32775880	32777155	+	transcript537.chr13.nnic@NA	transcript537.chr13.nnic	NA	32775880	32777155	Gene ID= novel_gene_chr13_538 TPM= 2.12 Transcript Type= NA
chr13	33016433	33066145	33016433	33066145	+	ENST00000380099.3@KL	ENST00000380099.3	protein_coding	33016433,33053767,33055047,33060679,33063849	33017259,33054277,33055315,33061780,33066145	Gene ID= ENSG00000133116.7 TPM= 3.19 Transcript Type= protein_coding
chr13	33103135	33285755	33103135	33285755	-	ENST00000336934.9@STARD13	ENST00000336934.9	protein_coding	33285470,33167551,33165337,33142310,33128929,33127373,33126081,33118065,33112721,33111778,33110686,33109873,33106758,33103135	33285755,33167622,33165418,33142373,33130289,33127546,33126240,33118263,33112931,33111892,33110907,33110090,33106934,33105710	Gene ID= ENSG00000133121.20 TPM= 8.5 Transcript Type= protein_coding
chr13	33103170	33206006	33103170	33206006	-	ENST00000399365.7@STARD13	ENST00000399365.7	protein_coding	33205819,33167551,33165337,33142310,33128929,33127373,33126081,33118065,33112721,33111778,33110686,33109873,33106758,33103170	33206006,33167622,33165418,33142373,33130289,33127546,33126240,33118263,33112931,33111892,33110907,33110090,33106934,33105710	Gene ID= ENSG00000133121.20 TPM= 1.06 Transcript Type= protein_coding
chr13	33232406	33235995	33232406	33235995	-	transcript553.chr13.nnic@NA	transcript553.chr13.nnic	NA	33232406	33235995	Gene ID= novel_gene_chr13_554 TPM= 2.12 Transcript Type= NA
chr13	33257266	33260017	33257266	33260017	+	transcript551.chr13.nnic@NA	transcript551.chr13.nnic	NA	33257266	33260017	Gene ID= novel_gene_chr13_552 TPM= 16.99 Transcript Type= NA
chr13	33519250	33521104	33519250	33521104	-	transcript555.chr13.nnic@NA	transcript555.chr13.nnic	NA	33519250	33521104	Gene ID= novel_gene_chr13_556 TPM= 2.12 Transcript Type= NA
chr13	33818049	33837496	33818049	33837496	+	ENST00000380071.7@RFC3	ENST00000380071.7	protein_coding	33818049,33821132,33823917,33825789,33829836,33830719,33831256,33835148,33836104	33818265,33821269,33823984,33825886,33830017,33830855,33831354,33835217,33837496	Gene ID= ENSG00000133119.12 TPM= 5.31 Transcript Type= protein_coding
chr13	34942276	35195901	34942276	35195901	+	transcript561.chr13.nic@NBEA	transcript561.chr13.nic	protein_coding	34942276,35040933,35044947,35045306,35048563,35050269,35056010,35058717,35069908,35070719,35098297,35109290,35110810,35117414,35118228,35118377,35123482,35142269,35155774,35156083,35157078,35159016,35161750,35164356,35168987,35171272,35173464,35176996,35182360,35183976,35195864	34943114,35041164,35045047,35045401,35048684,35050395,35056129,35058863,35070105,35070852,35098405,35109442,35110978,35117493,35118290,35118474,35123574,35142377,35155855,35156206,35157270,35160032,35161967,35164509,35168995,35171452,35173594,35177103,35182528,35184071,35195901	Gene ID= ENSG00000172915.18 TPM= 2.12 Transcript Type= NA
chr13	35099200	35102162	35099200	35102162	-	transcript565.chr13.nnic@NA	transcript565.chr13.nnic	NA	35099200	35102162	Gene ID= novel_gene_chr13_566 TPM= 3.19 Transcript Type= NA
chr13	36168208	36297845	36168208	36297845	-	transcript572.chr13.nnic@CCDC169-SOHLH2	transcript572.chr13.nnic	protein_coding	36297637,36283592,36283469,36254045,36253803,36248606,36201879,36193806,36193621,36191795,36189946,36174722,36174476,36173692,36170531,36168208	36297845,36283702,36283509,36254143,36253856,36248682,36202093,36193867,36193725,36191894,36190056,36174869,36174567,36173810,36170787,36169054	Gene ID= ENSG00000250709.1 TPM= 3.19 Transcript Type= NA
chr13	36301640	36346797	36301640	36346797	-	ENST00000451493.5@SPART	ENST00000451493.5	protein_coding	36346582,36335021,36331399,36329362,36326575,36314227,36312319,36312145,36301640	36346797,36335832,36331596,36329517,36326698,36314421,36312477,36312235,36304632	Gene ID= ENSG00000133104.12 TPM= 1.06 Transcript Type= protein_coding
chr13	36303022	36346327	36303022	36346327	-	transcript585.chr13.nnic@SPART	transcript585.chr13.nnic	protein_coding	36346240,36335021,36331399,36329362,36326575,36314227,36312319,36312145,36303022	36346327,36335832,36331596,36329517,36326698,36314421,36312477,36312235,36304632	Gene ID= ENSG00000133104.12 TPM= 2.12 Transcript Type= NA
chr13	36432358	36442882	36432358	36442882	+	ENST00000255465.6@CCNA1	ENST00000255465.6	protein_coding	36432358,36433033,36437629,36438067,36438644,36439979,36441118,36442171,36442614	36432729,36433221,36437875,36438191,36438867,36440183,36441231,36442304,36442882	Gene ID= ENSG00000133101.9 TPM= 3.72 Transcript Type= protein_coding
chr13	36431903	36442869	36431903	36442869	+	ENST00000440264.5@CCNA1	ENST00000440264.5	protein_coding	36431903,36433033,36437629,36438067,36438644,36439979,36441118,36442171,36442614	36432166,36433221,36437875,36438191,36438867,36440183,36441231,36442304,36442869	Gene ID= ENSG00000133101.9 TPM= 1.59 Transcript Type= protein_coding
chr13	36819224	36829104	36819224	36829104	+	ENST00000255476.2@RFXAP	ENST00000255476.2	protein_coding	36819224,36825428,36827643	36819957,36825535,36829104	Gene ID= ENSG00000133111.3 TPM= 4.25 Transcript Type= protein_coding
chr13	36844831	36920272	36844831	36920272	-	ENST00000379826.4@SMAD9	ENST00000379826.4	protein_coding	36920116,36879278,36872658,36867273,36865537,36853419,36844831	36920272,36879875,36872915,36867383,36865758,36853675,36848819	Gene ID= ENSG00000120693.13 TPM= 16.99 Transcript Type= protein_coding
chr13	36949849	36999379	36949849	36999379	-	transcript605.chr13.nnic@ALG5	transcript605.chr13.nnic	protein_coding	36999235,36995425,36994989,36993604,36989484,36985627,36971977,36967672,36965575,36952514,36949849	36999379,36995596,36995035,36993672,36989576,36985740,36972036,36967807,36965726,36952599,36950057	Gene ID= ENSG00000120697.8 TPM= 3.19 Transcript Type= NA
chr13	36949830	36999367	36949830	36999367	-	ENST00000239891.3@ALG5	ENST00000239891.3	protein_coding	36999235,36995425,36994989,36993604,36989484,36985627,36971977,36965575,36952514,36949830	36999367,36995596,36995035,36993672,36989576,36985740,36972036,36965726,36952599,36950057	Gene ID= ENSG00000120697.8 TPM= 22.31 Transcript Type= protein_coding
chr13	37000541	37009401	37000541	37009401	+	ENST00000389704.3@EXOSC8	ENST00000389704.3	protein_coding	37000541,37002273,37002488,37002934,37004516,37005920,37006115,37006975,37008057,37008729,37009184	37000822,37002309,37002551,37003007,37004561,37006025,37006160,37007071,37008177,37008835,37009401	Gene ID= ENSG00000120699.12 TPM= 21.59 Transcript Type= protein_coding
chr13	37000767	37009401	37000767	37009401	+	transcript627.chr13.nic@EXOSC8	transcript627.chr13.nic	protein_coding	37000767,37002273,37002488,37002934,37005920,37006115,37006975,37008057,37008729,37009184	37000822,37002309,37002551,37004561,37006025,37006160,37007071,37008177,37008835,37009401	Gene ID= ENSG00000120699.12 TPM= 3.54 Transcript Type= NA
chr13	37000787	37009401	37000787	37009401	+	ENST00000490537.6@EXOSC8	ENST00000490537.6	protein_coding	37000787,37002273,37002488,37002934,37005957,37006115,37006975,37008057,37008729,37009184	37000822,37002309,37002551,37004561,37006025,37006160,37007071,37008177,37008835,37009401	Gene ID= ENSG00000120699.12 TPM= 2.47 Transcript Type= retained_intron
chr13	37009494	37059686	37009494	37059686	-	ENST00000350612.10@SUPT20H	ENST00000350612.10	protein_coding	37059559,37051488,37048564,37047878,37047535,37045247,37044078,37040576,37040405,37033449,37031739,37031567,37029765,37028148,37026790,37026204,37025320,37024340,37024035,37022011,37021448,37019342,37017245,37012192,37010552,37009494	37059686,37051583,37048599,37047936,37047601,37045373,37044181,37040692,37040458,37033588,37031895,37031623,37029836,37028305,37026816,37026236,37025437,37024442,37024193,37022080,37021602,37019397,37017364,37012297,37010655,37009809	Gene ID= ENSG00000102710.19 TPM= 5.31 Transcript Type= protein_coding
chr13	37009316	37059713	37009316	37059713	-	ENST00000360252.8@SUPT20H	ENST00000360252.8	protein_coding	37059559,37051488,37048564,37047878,37047535,37045247,37044078,37040576,37040405,37033449,37031739,37031567,37029765,37028148,37026790,37026204,37025320,37024340,37024035,37022011,37021448,37019342,37017245,37012192,37009316	37059713,37051583,37048599,37047936,37047601,37045376,37044181,37040692,37040458,37033588,37031895,37031623,37029836,37028305,37026816,37026236,37025437,37024442,37024193,37022080,37021602,37019397,37017364,37012297,37009809	Gene ID= ENSG00000102710.19 TPM= 4.25 Transcript Type= protein_coding
chr13	37562589	37598844	37562589	37598844	-	ENST00000379747.8@POSTN	ENST00000379747.8	protein_coding	37598608,37597184,37592100,37590372,37587822,37586782,37586139,37584716,37583969,37582366,37580561,37579861,37579229,37579019,37578844,37577753,37574572,37571369,37570580,37569744,37569300,37564519,37562589	37598844,37597282,37592164,37590529,37587986,37586928,37586280,37584928,37584103,37582514,37580697,37579991,37579359,37579121,37578911,37577798,37574652,37571458,37570669,37569821,37569383,37564560,37563370	Gene ID= ENSG00000133110.14 TPM= 2.34 Transcript Type= protein_coding
chr13	37562583	37598844	37562583	37598844	-	ENST00000541179.5@POSTN	ENST00000541179.5	protein_coding	37598608,37597184,37592100,37590372,37587822,37586782,37586139,37584716,37583969,37582366,37580561,37579861,37579229,37579019,37578844,37577753,37571369,37570580,37569744,37564519,37562583	37598844,37597282,37592164,37590529,37587986,37586928,37586280,37584928,37584103,37582514,37580697,37579991,37579359,37579121,37578911,37577798,37571458,37570669,37569821,37564560,37563370	Gene ID= ENSG00000133110.14 TPM= 11.37 Transcript Type= protein_coding
chr13	37562589	37598768	37562589	37598768	-	transcript640.chr13.nic@POSTN	transcript640.chr13.nic	protein_coding	37598608,37597184,37592100,37590372,37587822,37586782,37586139,37584716,37583969,37582366,37580561,37579861,37579229,37579019,37578844,37577753,37570580,37569744,37564519,37562589	37598768,37597282,37592164,37590529,37587986,37586928,37586280,37584928,37584103,37582514,37580697,37579991,37579359,37579121,37578911,37577798,37570669,37569821,37564560,37563370	Gene ID= ENSG00000133110.14 TPM= 5.52 Transcript Type= NA
chr13	37562585	37598761	37562585	37598761	-	ENST00000379749.8@POSTN	ENST00000379749.8	protein_coding	37598608,37597184,37592100,37590372,37587822,37586782,37586139,37584716,37583969,37582366,37580561,37579861,37579229,37579019,37578844,37577753,37574572,37571369,37570580,37569744,37564519,37562585	37598761,37597282,37592164,37590529,37587986,37586928,37586280,37584928,37584103,37582514,37580697,37579991,37579359,37579121,37578911,37577798,37574652,37571458,37570669,37569821,37564560,37563370	Gene ID= ENSG00000133110.14 TPM= 1.81 Transcript Type= protein_coding
chr13	37562591	37598750	37562591	37598750	-	ENST00000379743.8@POSTN	ENST00000379743.8	protein_coding	37598608,37597184,37592100,37590372,37587822,37586782,37586139,37584716,37583969,37582366,37580561,37579861,37579229,37579019,37578844,37577753,37571369,37570580,37569744,37569300,37564519,37562591	37598750,37597282,37592164,37590529,37587986,37586928,37586280,37584928,37584103,37582514,37580697,37579991,37579359,37579121,37578911,37577798,37571458,37570669,37569821,37569383,37564560,37563370	Gene ID= ENSG00000133110.14 TPM= 1.27 Transcript Type= protein_coding
chr13	38349811	38362998	38349811	38362998	+	transcript650.chr13.nnic@UFM1	transcript650.chr13.nnic	protein_coding	38349811,38349999,38354239,38358093,38359301,38360041	38349921,38350055,38354296,38358132,38359333,38362998	Gene ID= ENSG00000120686.11 TPM= 7.44 Transcript Type= NA
chr13	38349883	38362999	38349883	38362999	+	transcript654.chr13.nic@UFM1	transcript654.chr13.nic	protein_coding	38349883,38349999,38354239,38358093,38359301	38349921,38350055,38354296,38358132,38362999	Gene ID= ENSG00000120686.11 TPM= 6.37 Transcript Type= NA
chr13	39038311	39050109	39038311	39050109	+	ENST00000470258.5@NHLRC3	ENST00000470258.5	protein_coding	39038311,39039136,39039564,39042105,39044090,39047040,39047674	39038465,39039288,39039711,39042305,39044181,39047152,39050109	Gene ID= ENSG00000188811.13 TPM= 2.12 Transcript Type= protein_coding
chr13	39038318	39050109	39038318	39050109	+	ENST00000379600.7@NHLRC3	ENST00000379600.7	protein_coding	39038318,39039136,39039564,39042105,39044090,39047040,39047674	39038723,39039288,39039711,39042305,39044181,39047152,39050109	Gene ID= ENSG00000188811.13 TPM= 6.37 Transcript Type= protein_coding
chr13	39038391	39050109	39038391	39050109	+	ENST00000379599.6@NHLRC3	ENST00000379599.6	protein_coding	39038391,39039136,39039564,39044090,39047040,39047674	39038723,39039288,39039711,39044181,39047152,39050109	Gene ID= ENSG00000188811.13 TPM= 3.19 Transcript Type= protein_coding
chr13	39342892	39603171	39342892	39603171	-	ENST00000379589.3@LHFPL6	ENST00000379589.3	protein_coding	39602883,39600832,39378428,39342892	39603171,39601390,39378526,39344054	Gene ID= ENSG00000183722.7 TPM= 138.08 Transcript Type= protein_coding
chr13	39520551	39524354	39520551	39524354	+	transcript665.chr13.nnic@NA	transcript665.chr13.nnic	NA	39520551	39524354	Gene ID= novel_gene_chr13_666 TPM= 4.25 Transcript Type= NA
chr13	39595468	39603155	39595468	39603155	-	transcript668.chr13.nic@LHFPL6	transcript668.chr13.nic	protein_coding	39602883,39595468	39603155,39601390	Gene ID= ENSG00000183722.7 TPM= 2.12 Transcript Type= NA
chr13	39598288	39603248	39598288	39603248	-	transcript669.chr13.nic@LHFPL6	transcript669.chr13.nic	protein_coding	39602883,39598288	39603248,39601390	Gene ID= ENSG00000183722.7 TPM= 16.99 Transcript Type= NA
chr13	39655677	39752632	39655677	39752632	+	ENST00000455146.7@COG6	ENST00000455146.7	protein_coding	39655677,39659364,39660810,39665096,39677468,39679538,39679975,39682171,39687503,39687708,39689760,39694634,39699501,39719236,39719660,39723333,39724508,39727469,39750946	39655879,39659507,39660881,39665154,39677579,39679620,39680045,39682264,39687631,39687799,39689824,39694725,39699618,39719367,39719827,39723440,39724561,39727548,39752632	Gene ID= ENSG00000133103.16 TPM= 3.19 Transcript Type= protein_coding
chr13	40333425	40335487	40333425	40335487	+	transcript680.chr13.nnic@NA	transcript680.chr13.nnic	NA	40333425	40335487	Gene ID= novel_gene_chr13_681 TPM= 2.12 Transcript Type= NA
chr13	40558916	40666644	40558916	40666644	-	transcript685.chr13.nic@FOXO1	transcript685.chr13.nic	protein_coding	40665583,40558916	40666644,40560860	Gene ID= ENSG00000150907.7 TPM= 3.19 Transcript Type= NA
chr13	40756874	40771205	40756874	40771205	-	transcript688.chr13.nic@MRPS31	transcript688.chr13.nic	protein_coding	40770985,40766746,40758948,40756874	40771205,40767033,40759106,40757013	Gene ID= ENSG00000102738.7 TPM= 5.31 Transcript Type= NA
chr13	40932028	41061355	40932028	41061355	-	transcript700.chr13.nic@ELF1	transcript700.chr13.nic	protein_coding	41060838,40981983,40958836,40951329,40949806,40943842,40942952,40940921,40932028	41061355,40982282,40959016,40951436,40949973,40943925,40943144,40941370,40934028	Gene ID= ENSG00000120690.15 TPM= 7.44 Transcript Type= NA
chr13	41046993	41049218	41046993	41049218	-	transcript710.chr13.nnic@NA	transcript710.chr13.nnic	NA	41046993	41049218	Gene ID= novel_gene_chr13_711 TPM= 2.12 Transcript Type= NA
chr13	41061517	41076237	41061517	41076237	+	transcript702.chr13.nic@WBP4	transcript702.chr13.nic	protein_coding	41061517,41062644,41065016,41065164,41068561,41071527,41072782,41076044	41061675,41062716,41065078,41065287,41068737,41071573,41072857,41076237	Gene ID= ENSG00000120688.8 TPM= 9.56 Transcript Type= NA
chr13	41132939	41236686	41132939	41236686	+	ENST00000619407.4@AL354696.2	ENST00000619407.4	antisense_RNA	41132939,41146427,41162263,41235116	41133055,41146507,41162403,41236686	Gene ID= ENSG00000278390.4 TPM= 2.12 Transcript Type= antisense_RNA
chr13	41216369	41263577	41216369	41263577	-	ENST00000379480.8@MTRF1	ENST00000379480.8	protein_coding	41263485,41260493,41254529,41252949,41252645,41240261,41233890,41226432,41223256,41216369	41263577,41260915,41254620,41253030,41252752,41240433,41234007,41226568,41223354,41217228	Gene ID= ENSG00000120662.15 TPM= 2.12 Transcript Type= protein_coding
chr13	41252282	41263569	41252282	41263569	-	ENST00000239852.10@MTRF1	ENST00000239852.10	protein_coding	41263485,41262048,41260493,41257673,41254529,41252949,41252282	41263569,41262331,41260915,41257796,41254620,41253030,41252752	Gene ID= ENSG00000120662.15 TPM= 1.06 Transcript Type= nonsense_mediated_decay
chr13	41311282	41358718	41311282	41358718	+	ENST00000476980.5@NAA16	ENST00000476980.5	protein_coding	41311282,41316846,41318806,41320667,41323056,41325698,41328724,41331274,41355144,41358304	41311582,41316930,41318910,41320824,41323190,41325851,41328843,41331369,41355216,41358718	Gene ID= ENSG00000172766.18 TPM= 2.12 Transcript Type= processed_transcript
chr13	41457559	41470882	41457559	41470882	+	ENST00000379359.3@RGCC	ENST00000379359.3	protein_coding	41457559,41458285,41466823,41468776,41470478	41457756,41458470,41466930,41468838,41470882	Gene ID= ENSG00000102760.12 TPM= 46.74 Transcript Type= protein_coding
chr13	41719337	41961120	41719337	41961120	-	ENST00000281496.6@VWA8	ENST00000281496.6	protein_coding	41960853,41949936,41912038,41907586,41891420,41887197,41886781,41885920,41883387,41868346,41865902,41865736,41833371,41830529,41819218,41816698,41811225,41787437,41783795,41777985,41761128,41732080,41729542,41727194,41721370,41719337	41961120,41950013,41912168,41907696,41891587,41887361,41886830,41886028,41883491,41868477,41866036,41865813,41833531,41830642,41819386,41816775,41811340,41787543,41783901,41778056,41761204,41732155,41729677,41727313,41721575,41719742	Gene ID= ENSG00000102763.17 TPM= 7.44 Transcript Type= protein_coding
chr13	41854889	41856851	41854889	41856851	+	transcript737.chr13.nnic@NA	transcript737.chr13.nnic	NA	41854889	41856851	Gene ID= novel_gene_chr13_738 TPM= 3.19 Transcript Type= NA
chr13	42040688	42230117	42040688	42230117	+	transcript739.chr13.nnic@DGKH	transcript739.chr13.nnic	protein_coding	42040688,42048762,42127463,42155291,42155667,42159266,42160011,42165331,42166515,42168440,42168679,42174060,42178135,42187049,42189036,42190403,42194885,42198478,42199566,42199813,42206039,42208959,42209331,42210602,42214507,42215575,42219230,42219686,42229099	42040942,42048965,42127573,42155395,42155799,42159372,42160136,42165433,42166674,42168548,42168818,42174144,42178220,42187148,42189309,42190525,42195016,42198595,42199676,42199909,42206146,42209072,42209465,42210765,42214612,42215667,42219349,42219794,42230117	Gene ID= ENSG00000102780.16 TPM= 3.19 Transcript Type= NA
chr13	42272153	42323267	42272153	42323267	+	ENST00000025301.3@AKAP11	ENST00000025301.3	protein_coding	42272153,42285986,42286300,42292385,42295695,42297048,42298533,42299363,42308454,42313047,42313894,42317528,42319088	42272228,42286035,42286399,42292501,42295742,42297182,42298797,42303863,42308609,42313130,42313940,42317688,42323267	Gene ID= ENSG00000023516.8 TPM= 1.06 Transcript Type= protein_coding
chr13	43023203	43114224	43023203	43114224	+	ENST00000379221.3@DNAJC15	ENST00000379221.3	protein_coding	43023203,43065686,43068930,43078612,43085768,43107178	43023734,43065737,43069003,43078688,43085838,43114224	Gene ID= ENSG00000120675.5 TPM= 57.36 Transcript Type= protein_coding
chr13	43072583	43075653	43072583	43075653	-	transcript755.chr13.nnic@NA	transcript755.chr13.nnic	NA	43072583	43075653	Gene ID= novel_gene_chr13_756 TPM= 2.12 Transcript Type= NA
chr13	43213518	43786940	43213518	43786940	-	transcript761.chr13.nnic@ENOX1	transcript761.chr13.nnic	protein_coding	43786652,43667479,43484009,43412845,43411916,43361279,43359851,43355919,43344538,43326419,43322384,43298346,43269470,43265398,43236636,43224053,43213518	43786940,43667544,43484152,43412988,43412053,43361452,43360057,43356152,43344750,43326525,43322501,43298530,43269577,43265454,43236738,43224138,43214121	Gene ID= ENSG00000120658.13 TPM= 5.31 Transcript Type= NA
chr13	43879842	43893932	43879842	43893932	+	transcript772.chr13.nnic@LACC1	transcript772.chr13.nnic	protein_coding	43879842,43880952,43882185,43883771,43888757,43890114,43891449	43879981,43881547,43882363,43883936,43888982,43890274,43893932	Gene ID= ENSG00000179630.10 TPM= 3.19 Transcript Type= NA
chr13	43879833	43893932	43879833	43893932	+	ENST00000325686.6@LACC1	ENST00000325686.6	protein_coding	43879833,43880952,43882185,43883771,43888757,43890114,43891449	43880119,43881547,43882363,43883936,43888982,43890274,43893932	Gene ID= ENSG00000179630.10 TPM= 2.12 Transcript Type= protein_coding
chr13	44373641	44397714	44373641	44397714	+	transcript784.chr13.nic@SERP2	transcript784.chr13.nic	protein_coding	44373641,44373999,44379641,44397272	44373757,44374109,44379713,44397714	Gene ID= ENSG00000151778.10 TPM= 4.78 Transcript Type= NA
chr13	44373842	44397714	44373842	44397714	+	ENST00000379179.7@SERP2	ENST00000379179.7	protein_coding	44373842,44379641,44397272	44374109,44379713,44397714	Gene ID= ENSG00000151778.10 TPM= 10.09 Transcript Type= protein_coding
chr13	44433524	44436868	44433524	44436868	-	transcript790.chr13.nnic@TSC22D1	transcript790.chr13.nnic	protein_coding	44436504,44436044,44434398,44433524	44436868,44436095,44434883,44434368	Gene ID= ENSG00000102804.14 TPM= 14.87 Transcript Type= NA
chr13	44432143	44437254	44432143	44437254	-	ENST00000622051.1@TSC22D1	ENST00000622051.1	protein_coding	44437176,44436044,44432143	44437254,44436095,44434883	Gene ID= ENSG00000102804.14 TPM= 1.06 Transcript Type= protein_coding
chr13	44574780	44577288	44574780	44577288	-	transcript796.chr13.nnic@NA	transcript796.chr13.nnic	NA	44574780	44577288	Gene ID= novel_gene_chr13_797 TPM= 2.12 Transcript Type= NA
chr13	44939249	44989483	44939249	44989483	-	ENST00000379161.4@NUFIP1	ENST00000379161.4	protein_coding	44989025,44982072,44980722,44979890,44979190,44965844,44959381,44949722,44943442,44939249	44989483,44982154,44980820,44979952,44979266,44965936,44959574,44949838,44943674,44941322	Gene ID= ENSG00000083635.7 TPM= 1.06 Transcript Type= protein_coding
chr13	44989538	45030291	44989538	45030291	+	transcript810.chr13.nic@GPALPP1	transcript810.chr13.nic	protein_coding	44989538,45004305,45006202,45008795,45014952,45015432,45020330,45027785,45029239	44989742,45004437,45006303,45008879,45015083,45015596,45020428,45028003,45030291	Gene ID= ENSG00000133114.17 TPM= 2.12 Transcript Type= NA
chr13	44989538	45033605	44989538	45033605	+	transcript811.chr13.nic@GPALPP1	transcript811.chr13.nic	protein_coding	44989538,45004305,45006202,45008795,45014952,45015432,45020330,45027785,45033236	44989742,45004437,45006303,45008879,45015083,45015596,45020428,45028003,45033605	Gene ID= ENSG00000133114.17 TPM= 3.19 Transcript Type= NA
chr13	45207010	45284105	45207010	45284105	+	transcript824.chr13.nic@GTF2F2	transcript824.chr13.nic	protein_coding	45207010,45252871,45267233,45283442	45207505,45252970,45267376,45284105	Gene ID= ENSG00000188342.11 TPM= 6.37 Transcript Type= NA
chr13	45333471	45341370	45333471	45341370	-	ENST00000530705.5@TPT1	ENST00000530705.5	protein_coding	45341042,45340712,45339994,45339497,45338660,45333471	45341370,45340785,45340184,45339602,45338776,45337388	Gene ID= ENSG00000133112.16 TPM= 143.07 Transcript Type= protein_coding
chr13	45333471	45341284	45333471	45341284	-	ENST00000616577.4@TPT1	ENST00000616577.4	protein_coding	45341042,45340712,45339994,45339497,45338660,45333471	45341284,45340785,45340184,45339602,45338776,45337553	Gene ID= ENSG00000133112.16 TPM= 2.87 Transcript Type= protein_coding
chr13	45336873	45341212	45336873	45341212	-	ENST00000379056.5@TPT1	ENST00000379056.5	protein_coding	45341042,45339994,45339497,45338660,45336873	45341212,45340184,45339602,45338776,45337388	Gene ID= ENSG00000133112.16 TPM= 50.13 Transcript Type= protein_coding
chr13	45337198	45341122	45337198	45341122	-	ENST00000379060.8@TPT1	ENST00000379060.8	protein_coding	45341038,45340712,45339994,45339497,45338660,45337198	45341122,45340785,45340184,45339602,45338776,45337388	Gene ID= ENSG00000133112.16 TPM= 128.73 Transcript Type= protein_coding
chr13	45341476	45360411	45341476	45360411	+	transcript841.chr13.nic@TPT1-AS1	transcript841.chr13.nic	processed_transcript	45341476,45344329,45360141	45341614,45344446,45360411	Gene ID= ENSG00000170919.15 TPM= 2.12 Transcript Type= NA
chr13	45361368	45363510	45361368	45363510	-	transcript842.chr13.nnic@NA	transcript842.chr13.nnic	NA	45361368	45363510	Gene ID= novel_gene_chr13_843 TPM= 13.81 Transcript Type= NA
chr13	45364762	45365894	45364762	45365894	-	transcript844.chr13.nnic@NA	transcript844.chr13.nnic	NA	45364762	45365894	Gene ID= novel_gene_chr13_845 TPM= 2.12 Transcript Type= NA
chr13	45393316	45418383	45393316	45418383	-	transcript857.chr13.nnic@SLC25A30	transcript857.chr13.nnic	protein_coding	45418300,45411362,45408927,45405883,45404327,45402275,45401083,45398940,45393316	45418383,45411480,45409074,45405977,45404412,45402370,45401207,45399078,45396318	Gene ID= ENSG00000174032.16 TPM= 3.19 Transcript Type= NA
chr13	45393316	45418380	45393316	45418380	-	ENST00000519676.5@SLC25A30	ENST00000519676.5	protein_coding	45418300,45411362,45408927,45405883,45404327,45402275,45401083,45398940,45397258,45393316	45418380,45411480,45409074,45405977,45404412,45402370,45401207,45399078,45397338,45396015	Gene ID= ENSG00000174032.16 TPM= 35.05 Transcript Type= protein_coding
chr13	45462770	45465537	45462770	45465537	-	transcript868.chr13.nnic@NA	transcript868.chr13.nnic	NA	45462770	45465537	Gene ID= novel_gene_chr13_869 TPM= 2.12 Transcript Type= NA
chr13	45464925	45536630	45464925	45536630	+	ENST00000349995.9@COG3	ENST00000349995.9	protein_coding	45464925,45476201,45479005,45480125,45481230,45482381,45483230,45486495,45490915,45491412,45492159,45493347,45496152,45503244,45509692,45511765,45516143,45518762,45518960,45524976,45529791,45530682,45534702	45465210,45476347,45479066,45480290,45481304,45482473,45483355,45486575,45490958,45491538,45492250,45493486,45496312,45503349,45509816,45511854,45516263,45518850,45519094,45525051,45529918,45530780,45536630	Gene ID= ENSG00000136152.14 TPM= 9.56 Transcript Type= protein_coding
chr13	45465005	45493936	45465005	45493936	+	ENST00000617493.1@COG3	ENST00000617493.1	protein_coding	45465005,45476201,45479005,45480125,45481230,45482381,45483230,45486495,45490915,45491412,45492159,45493347	45465210,45476347,45479066,45480290,45481304,45482473,45483355,45486575,45490958,45491538,45492250,45493936	Gene ID= ENSG00000136152.14 TPM= 1.06 Transcript Type= protein_coding
chr13	45525636	45528359	45525636	45528359	-	transcript866.chr13.nnic@NA	transcript866.chr13.nnic	NA	45525636	45528359	Gene ID= novel_gene_chr13_867 TPM= 2.12 Transcript Type= NA
chr13	45969556	46052765	45969556	46052765	-	transcript872.chr13.nnic@ZC3H13	transcript872.chr13.nnic	protein_coding	46052404,46045391,46044955,46042164,46020449,46011415,46010348,46003139,45988787,45985297,45979813,45975283,45970362,45969556	46052765,46045516,46045064,46042275,46020557,46011554,46010505,46003336,45989097,45985761,45980004,45975838,45970465,45969971	Gene ID= ENSG00000123200.16 TPM= 12.75 Transcript Type= NA
chr13	45962176	46052759	45962176	46052759	-	ENST00000282007.7@ZC3H13	ENST00000282007.7	protein_coding	46052698,46045391,46044955,46042164,46020449,46011415,46010348,46003139,45988787,45985297,45979813,45975283,45970362,45968748,45967504,45965280,45962176	46052759,46045516,46045064,46042275,46020557,46011554,46010505,46003336,45989097,45985761,45980004,45975838,45970465,45969971,45968028,45965432,45964042	Gene ID= ENSG00000123200.16 TPM= 2.12 Transcript Type= protein_coding
chr13	45954465	46052746	45954465	46052746	-	ENST00000242848.8@ZC3H13	ENST00000242848.8	protein_coding	46052404,46045391,46044955,46042164,46020449,46011415,46010348,46003139,45988787,45985297,45979813,45975283,45970362,45968748,45967504,45965280,45963842,45959483,45954465	46052746,46045513,46045064,46042275,46020557,46011554,46010505,46003336,45989097,45985761,45980004,45975838,45970465,45969971,45968028,45965429,45964042,45959646,45957297	Gene ID= ENSG00000123200.16 TPM= 4.25 Transcript Type= protein_coding
chr13	46049739	46052007	46049739	46052007	+	transcript892.chr13.nnic@NA	transcript892.chr13.nnic	NA	46049739	46052007	Gene ID= novel_gene_chr13_893 TPM= 19.12 Transcript Type= NA
chr13	46125926	46182324	46125926	46182324	-	ENST00000323076.6@LCP1	ENST00000323076.6	protein_coding	46182111,46159599,46158826,46158522,46156438,46154805,46152780,46150936,46148352,46146908,46144442,46143290,46142292,46134127,46130814,46125926	46182324,46159686,46158989,46158651,46156570,46154886,46152945,46151078,46148447,46147103,46144520,46143404,46142425,46134250,46130938,46127723	Gene ID= ENSG00000136167.13 TPM= 6.37 Transcript Type= protein_coding
chr13	46553200	46743595	46553200	46743595	+	ENST00000389798.7@LRCH1	ENST00000389798.7	protein_coding	46553200,46650201,46669030,46681741,46685905,46687852,46689133,46692536,46694893,46699336,46701121,46705068,46705268,46711791,46712525,46723221,46728847,46733921,46741642	46553703,46650345,46669156,46681846,46686041,46687979,46689196,46692641,46695017,46699403,46701207,46705157,46705304,46711844,46712597,46723330,46728984,46733998,46743595	Gene ID= ENSG00000136141.14 TPM= 1.59 Transcript Type= protein_coding
chr13	46553168	46753040	46553168	46753040	+	ENST00000311191.10@LRCH1	ENST00000311191.10	protein_coding	46553168,46650201,46669030,46681741,46685905,46687852,46689133,46692536,46694893,46699336,46701121,46705068,46705268,46711791,46712525,46723221,46728847,46733921,46750540	46553703,46650345,46669156,46681846,46686041,46687979,46689196,46692641,46695017,46699403,46701207,46705157,46705304,46711844,46712597,46723330,46728984,46733998,46753040	Gene ID= ENSG00000136141.14 TPM= 12.21 Transcript Type= protein_coding
chr13	46708278	46711198	46708278	46711198	-	transcript901.chr13.nnic@NA	transcript901.chr13.nnic	NA	46708278	46711198	Gene ID= novel_gene_chr13_902 TPM= 7.44 Transcript Type= NA
chr13	46771256	46797232	46771256	46797232	-	ENST00000378720.7@ESD	ENST00000378720.7	protein_coding	46797105,46793397,46791346,46787021,46784252,46782667,46781496,46779935,46777456,46771256	46797232,46793444,46791420,46787109,46784350,46782791,46781615,46780033,46777623,46771496	Gene ID= ENSG00000139684.13 TPM= 60.54 Transcript Type= protein_coding
chr13	46775383	46797184	46775383	46797184	-	transcript910.chr13.nic@ESD	transcript910.chr13.nic	protein_coding	46797105,46793397,46791346,46787021,46784252,46782667,46781496,46779935,46777456,46775383	46797184,46793444,46791420,46787109,46784350,46782791,46781615,46780033,46777623,46775692	Gene ID= ENSG00000139684.13 TPM= 3.19 Transcript Type= NA
chr13	46775386	46797184	46775386	46797184	-	transcript913.chr13.nic@ESD	transcript913.chr13.nic	protein_coding	46797105,46793397,46791346,46787021,46784252,46782667,46781496,46779935,46775386	46797184,46793444,46791420,46787109,46784350,46782791,46781615,46780033,46777623	Gene ID= ENSG00000139684.13 TPM= 3.19 Transcript Type= NA
chr13	46771335	46797133	46771335	46797133	-	ENST00000378697.5@ESD	ENST00000378697.5	protein_coding	46797105,46793397,46791346,46790597,46787021,46784252,46782667,46781496,46779935,46777456,46771335	46797133,46793444,46791420,46790661,46787109,46784350,46782791,46781615,46780033,46777623,46771496	Gene ID= ENSG00000139684.13 TPM= 1.06 Transcript Type= protein_coding
chr13	47942656	48001354	47942656	48001354	-	ENST00000378654.8@SUCLA2	ENST00000378654.8	protein_coding	48001180,47996843,47988882,47988541,47973264,47968595,47954396,47954140,47949483,47948940,47942656	48001354,47997023,47988981,47988703,47973392,47968733,47954557,47954282,47949603,47949028,47943445	Gene ID= ENSG00000136143.14 TPM= 300.06 Transcript Type= protein_coding
chr13	47987634	48001273	47987634	48001273	-	ENST00000470760.2@SUCLA2	ENST00000470760.2	protein_coding	48001180,47996843,47988882,47987634	48001273,47997023,47988981,47988703	Gene ID= ENSG00000136143.14 TPM= 2.12 Transcript Type= protein_coding
chr13	47960601	47964997	47960601	47964997	+	transcript929.chr13.nnic@NA	transcript929.chr13.nnic	NA	47960601	47964997	Gene ID= novel_gene_chr13_930 TPM= 5.31 Transcript Type= NA
chr13	48037567	48047222	48037567	48047222	+	ENST00000258662.2@NUDT15	ENST00000258662.2	protein_coding	48037567,48040920,48045660	48037904,48041116,48047222	Gene ID= ENSG00000136159.3 TPM= 15.93 Transcript Type= protein_coding
chr13	48075956	48095104	48075956	48095104	-	ENST00000258648.6@MED4	ENST00000258648.6	protein_coding	48094954,48090352,48086282,48083371,48081645,48079844,48075956	48095104,48090418,48086452,48083428,48081731,48079975,48077311	Gene ID= ENSG00000136146.14 TPM= 10.62 Transcript Type= protein_coding
chr13	48233158	48270357	48233158	48270357	+	ENST00000378565.9@ITM2B	ENST00000378565.9	protein_coding	48233158,48253808,48256177,48258126,48258797,48261139	48233477,48253936,48256383,48258236,48258947,48270357	Gene ID= ENSG00000136156.12 TPM= 7.44 Transcript Type= protein_coding
chr13	48402381	48404682	48402381	48404682	-	transcript972.chr13.nnic@NA	transcript972.chr13.nnic	NA	48402381	48404682	Gene ID= novel_gene_chr13_973 TPM= 2.12 Transcript Type= NA
chr13	48411732	48413114	48411732	48413114	-	transcript970.chr13.nnic@NA	transcript970.chr13.nnic	NA	48411732	48413114	Gene ID= novel_gene_chr13_971 TPM= 4.25 Transcript Type= NA
chr13	48488959	48533233	48488959	48533233	-	ENST00000344532.7@RCBTB2	ENST00000344532.7	protein_coding	48533028,48524659,48522308,48521898,48515586,48515205,48512729,48512016,48511770,48510629,48502724,48501742,48499621,48496191,48488959	48533233,48524757,48522403,48521962,48515741,48515355,48512895,48512174,48511877,48510771,48502914,48501868,48499760,48496321,48490251	Gene ID= ENSG00000136161.12 TPM= 9.56 Transcript Type= protein_coding
chr13	48488970	48533256	48488970	48533256	-	ENST00000544904.3@RCBTB2	ENST00000544904.3	protein_coding	48533028,48515586,48515205,48512729,48512016,48511770,48510629,48502724,48501742,48499621,48496191,48488970	48533256,48515741,48515355,48512895,48512174,48511877,48510771,48502914,48501868,48499760,48496321,48490251	Gene ID= ENSG00000136161.12 TPM= 5.31 Transcript Type= protein_coding
chr13	48976609	49209778	48976609	49209778	+	ENST00000541916.5@FNDC3A	ENST00000541916.5	protein_coding	48976609,49006152,49075289,49114655,49131137,49136332,49138747,49145778,49167244,49168613,49172043,49174435,49175367,49178568,49185964,49187122,49188515,49191015,49191209,49196877,49197725,49197982,49198362,49201800,49203157,49207081	48976917,49006289,49075364,49114731,49131374,49136601,49138805,49145935,49167303,49168751,49172096,49174559,49175541,49178654,49186102,49187190,49188633,49191120,49191384,49196990,49197874,49198265,49198574,49201966,49203284,49209778	Gene ID= ENSG00000102531.16 TPM= 4.96 Transcript Type= protein_coding
chr13	48975903	49075426	48975903	49075426	+	transcript988.chr13.nic@FNDC3A	transcript988.chr13.nic	protein_coding	48975903,49006152,49075289	48976177,49006289,49075426	Gene ID= ENSG00000102531.16 TPM= 2.12 Transcript Type= NA
chr13	48975912	49209779	48975912	49209779	+	ENST00000492622.6@FNDC3A	ENST00000492622.6	protein_coding	48975912,49006152,49075289,49114655,49131137,49136332,49138747,49145778,49167244,49168613,49172043,49174435,49175367,49178568,49185964,49187122,49188515,49191015,49191209,49196877,49197725,49197982,49198362,49201800,49203157,49207081	48976177,49006289,49075364,49114731,49131374,49136601,49138805,49145935,49167303,49168751,49172096,49174559,49175541,49178654,49186102,49187190,49188633,49191120,49191384,49196990,49197874,49198265,49198574,49201966,49203284,49209779	Gene ID= ENSG00000102531.16 TPM= 1.77 Transcript Type= protein_coding
chr13	49110313	49209593	49110313	49209593	+	ENST00000398316.7@FNDC3A	ENST00000398316.7	protein_coding	49110313,49114655,49131137,49136332,49138747,49145778,49167244,49168613,49172043,49174435,49175367,49178568,49185964,49187122,49188515,49191015,49191209,49196877,49197725,49197982,49198362,49201800,49203157,49207081	49110406,49114731,49131374,49136601,49138805,49145935,49167303,49168751,49172096,49174559,49175541,49178654,49186102,49187190,49188633,49191120,49191384,49196990,49197874,49198265,49198574,49201966,49203284,49209593	Gene ID= ENSG00000102531.16 TPM= 3.9 Transcript Type= protein_coding
chr13	49247875	49267785	49247875	49267785	+	transcript994.chr13.nic@CDADC1	transcript994.chr13.nic	protein_coding	49247875,49248871,49255839,49259346,49267490	49248119,49248965,49255913,49259523,49267785	Gene ID= ENSG00000102543.14 TPM= 2.12 Transcript Type= NA
chr13	49247947	49267785	49247947	49267785	+	ENST00000466868.1@CDADC1	ENST00000466868.1	protein_coding	49247947,49248871,49255839,49259486,49267490	49248119,49248965,49255913,49259523,49267785	Gene ID= ENSG00000102543.14 TPM= 1.06 Transcript Type= processed_transcript
chr13	49309798	49444126	49309798	49444126	-	ENST00000409308.5@CAB39L	ENST00000409308.5	protein_coding	49443986,49434086,49433318,49382800,49376967,49359714,49350744,49344179,49339677,49331947,49309798	49444126,49434223,49433393,49382941,49377131,49359832,49350912,49344238,49339742,49332090,49310993	Gene ID= ENSG00000102547.18 TPM= 3.19 Transcript Type= protein_coding
chr13	49444225	49492257	49444225	49492257	+	transcript999.chr13.nic@SETDB2	transcript999.chr13.nic	protein_coding	49444225,49451553,49460107,49461097,49467864,49476476,49480219,49480947,49482737,49483464,49485630,49488290,49490822,49491732	49444857,49451909,49460232,49461162,49467960,49477039,49480335,49481116,49482962,49483563,49485723,49488630,49490910,49492257	Gene ID= ENSG00000136169.16 TPM= 2.12 Transcript Type= NA
chr13	49495961	49528987	49495961	49528987	+	ENST00000378319.7@PHF11	ENST00000378319.7	protein_coding	49495961,49506635,49513059,49518018,49520894,49522043,49523175,49524085,49526387,49528511	49496095,49506756,49513166,49518151,49520940,49522107,49523241,49524216,49526458,49528987	Gene ID= ENSG00000136147.17 TPM= 9.56 Transcript Type= protein_coding
chr13	49495610	49521033	49495610	49521033	+	ENST00000482487.5@PHF11	ENST00000482487.5	protein_coding	49495610,49506635,49513059,49518018,49520894	49496095,49506756,49513166,49518151,49521033	Gene ID= ENSG00000136147.17 TPM= 1.06 Transcript Type= retained_intron
chr13	49531946	49585602	49531946	49585602	-	transcript1015.chr13.nnic@RCBTB1	transcript1015.chr13.nnic	protein_coding	49585444,49567154,49566618,49559918,49555515,49552178,49551326,49549458,49544737,49541676,49540876,49531946	49585602,49567320,49566768,49560084,49555673,49552285,49551468,49549648,49544863,49541827,49541006,49534262	Gene ID= ENSG00000136144.11 TPM= 5.31 Transcript Type= NA
chr13	49540408	49585602	49540408	49585602	-	transcript1017.chr13.nic@RCBTB1	transcript1017.chr13.nic	protein_coding	49585444,49580505,49567154,49566618,49559918,49555515,49552178,49551326,49549458,49544737,49541676,49540408	49585602,49580584,49567320,49566768,49560084,49555673,49552285,49551468,49549648,49544863,49541827,49541006	Gene ID= ENSG00000136144.11 TPM= 2.12 Transcript Type= NA
chr13	49531946	49585583	49531946	49585583	-	ENST00000378302.6@RCBTB1	ENST00000378302.6	protein_coding	49585444,49580505,49567154,49566618,49559918,49555515,49552178,49551326,49549458,49544737,49541676,49540876,49531946	49585583,49580584,49567320,49566768,49560084,49555673,49552285,49551468,49549648,49544863,49541827,49541006,49534262	Gene ID= ENSG00000136144.11 TPM= 29.74 Transcript Type= protein_coding
chr13	49660726	49691475	49660726	49691475	-	ENST00000242827.10@EBPL	ENST00000242827.10	protein_coding	49691254,49669777,49663057,49660726	49691475,49669846,49663195,49661208	Gene ID= ENSG00000123179.13 TPM= 5.31 Transcript Type= protein_coding
chr13	49660723	49691438	49660723	49691438	-	ENST00000473576.6@EBPL	ENST00000473576.6	protein_coding	49691254,49663057,49660723	49691438,49663195,49661208	Gene ID= ENSG00000123179.13 TPM= 4.25 Transcript Type= processed_transcript
chr13	49677629	49679017	49677629	49679017	+	transcript1025.chr13.nnic@NA	transcript1025.chr13.nnic	NA	49677629	49679017	Gene ID= novel_gene_chr13_1026 TPM= 4.25 Transcript Type= NA
chr13	49699307	49792921	49699307	49792921	-	ENST00000261667.7@KPNA3	ENST00000261667.7	protein_coding	49792438,49746949,49732957,49732747,49732605,49732371,49725416,49722477,49721955,49719775,49710891,49709572,49706268,49706098,49705621,49702386,49699307	49792921,49746993,49733046,49732776,49732657,49732466,49725501,49722563,49722124,49719819,49711022,49709700,49706372,49706169,49705783,49702480,49701898	Gene ID= ENSG00000102753.9 TPM= 27.62 Transcript Type= protein_coding
chr13	49787683	49792576	49787683	49792576	-	transcript1035.chr13.nnic@NA	transcript1035.chr13.nnic	NA	49787683	49792576	Gene ID= novel_gene_chr13_1036 TPM= 2.12 Transcript Type= NA
chr13	49912706	49936490	49912706	49936490	-	ENST00000378195.6@SPRYD7	ENST00000378195.6	protein_coding	49936130,49927919,49921478,49912706	49936490,49928085,49921580,49915160	Gene ID= ENSG00000123178.14 TPM= 1.06 Transcript Type= protein_coding
chr13	49997019	50014331	49997019	50014331	+	ENST00000420995.6@TRIM13	ENST00000420995.6	protein_coding	49997019,49997667,50011935	49997131,49997763,50014331	Gene ID= ENSG00000204977.9 TPM= 16.99 Transcript Type= protein_coding
chr13	49997059	50013168	49997059	50013168	+	ENST00000457662.2@TRIM13	ENST00000457662.2	protein_coding	49997059,49997667,50011935	49997216,49997763,50013168	Gene ID= ENSG00000204977.9 TPM= 8.5 Transcript Type= protein_coding
chr13	50015036	50016741	50015036	50016741	-	transcript1073.chr13.nnic@NA	transcript1073.chr13.nnic	NA	50015036	50016741	Gene ID= novel_gene_chr13_1074 TPM= 2.12 Transcript Type= NA
chr13	50082171	50107218	50082171	50107218	+	ENST00000469754.2@DLEU1	ENST00000469754.2	processed_transcript	50082171,50083142,50104704	50082557,50083194,50107218	Gene ID= ENSG00000176124.11 TPM= 4.25 Transcript Type= lincRNA
chr13	50082171	50105297	50082171	50105297	+	ENST00000378180.8@DLEU1	ENST00000378180.8	processed_transcript	50082171,50104704	50082557,50105297	Gene ID= ENSG00000176124.11 TPM= 7.44 Transcript Type= lincRNA
chr13	50910017	50970457	50910017	50970457	+	transcript1076.chr13.nnic@RNASEH2B	transcript1076.chr13.nnic	protein_coding	50910017,50927407,50929475,50930683,50934885,50943321,50945427,50947987,50949463,50953905,50960145,50969932	50910140,50927478,50929582,50930759,50934999,50943394,50945532,50948068,50949505,50953985,50960171,50970457	Gene ID= ENSG00000136104.19 TPM= 2.12 Transcript Type= NA
chr13	50909678	50956765	50909678	50956765	+	ENST00000336617.7@RNASEH2B	ENST00000336617.7	protein_coding	50909678,50927407,50929475,50930683,50934885,50943321,50945427,50947987,50949463,50953905,50956358	50910140,50927478,50929582,50930759,50934999,50943394,50945532,50948068,50949505,50953985,50956765	Gene ID= ENSG00000136104.19 TPM= 5.31 Transcript Type= protein_coding
chr13	51365227	51452297	51365227	51452297	-	transcript1099.chr13.nic@INTS6	transcript1099.chr13.nic	protein_coding	51451978,51451025,51430294,51395300,51389319,51387386,51383589,51383329,51382029,51379462,51378239,51376048,51374654,51374208,51368939,51367805,51365227	51452297,51451174,51430383,51395483,51389444,51387540,51383741,51383461,51382123,51379572,51378454,51376174,51374796,51374439,51369310,51367898,51365845	Gene ID= ENSG00000102786.14 TPM= 10.09 Transcript Type= NA
chr13	51365227	51452998	51365227	51452998	-	ENST00000311234.8@INTS6	ENST00000311234.8	protein_coding	51452415,51451978,51451025,51430294,51395300,51389319,51387386,51383589,51383329,51382029,51379462,51378239,51376048,51374654,51374208,51368939,51367805,51365227	51452998,51452055,51451174,51430383,51395483,51389444,51387540,51383741,51383461,51382123,51379572,51378454,51376174,51374796,51374439,51369310,51367898,51365845	Gene ID= ENSG00000102786.14 TPM= 18.59 Transcript Type= protein_coding
chr13	51453341	51454830	51453341	51454830	+	ENST00000598905.1@INTS6-AS1	ENST00000598905.1	antisense_RNA	51453341,51454003	51453418,51454830	Gene ID= ENSG00000236778.7 TPM= 1.06 Transcript Type= antisense_RNA
chr13	51763317	51766793	51763317	51766793	+	transcript1115.chr13.nnic@NA	transcript1115.chr13.nnic	NA	51763317	51766793	Gene ID= novel_gene_chr13_1116 TPM= 4.25 Transcript Type= NA
chr13	51767995	51804176	51767995	51804176	-	transcript1122.chr13.nic@DHRS12	transcript1122.chr13.nic	protein_coding	51804054,51799534,51797826,51791165,51790011,51777060,51773930,51771821,51767995	51804176,51799667,51797908,51791257,51790092,51777121,51774034,51771911,51769293	Gene ID= ENSG00000102796.10 TPM= 2.12 Transcript Type= NA
chr13	51767993	51804123	51767993	51804123	-	ENST00000444610.6@DHRS12	ENST00000444610.6	protein_coding	51804054,51799534,51797826,51791165,51790011,51777060,51773930,51771821,51769156,51767993	51804123,51799667,51797908,51791257,51790092,51777121,51774034,51771911,51769293,51768296	Gene ID= ENSG00000102796.10 TPM= 3.19 Transcript Type= protein_coding
chr13	51803838	51805630	51803838	51805630	+	ENST00000618844.1@AL162377.1	ENST00000618844.1	antisense_RNA	51803838	51805630	Gene ID= ENSG00000231856.2 TPM= 7.44 Transcript Type= antisense_RNA
chr13	51964774	52012132	51964774	52012132	-	transcript1139.chr13.nic@ATP7B	transcript1139.chr13.nic	protein_coding	52011287,51973935,51970492,51968444,51964774	52012132,51975168,51970749,51968607,51965033	Gene ID= ENSG00000123191.14 TPM= 2.12 Transcript Type= NA
chr13	52012412	52029530	52012412	52029530	+	transcript1147.chr13.nnic@ALG11	transcript1147.chr13.nnic	protein_coding	52012412,52018913,52024006,52028319	52012574,52019143,52024937,52029530	Gene ID= ENSG00000253710.2 TPM= 4.25 Transcript Type= NA
chr13	52012411	52017713	52012411	52017713	+	ENST00000616513.1@ALG11	ENST00000616513.1	protein_coding	52012411,52015783	52012462,52017713	Gene ID= ENSG00000253710.2 TPM= 1.06 Transcript Type= protein_coding
chr13	52012414	52029664	52012414	52029664	+	ENST00000521508.1@ALG11	ENST00000521508.1	protein_coding	52012414,52018913,52024006,52028319	52012462,52019143,52024937,52029664	Gene ID= ENSG00000253710.2 TPM= 14.87 Transcript Type= protein_coding
chr13	52012398	52029657	52012398	52029657	+	ENST00000523764.1@ALG11	ENST00000523764.1	protein_coding	52012398,52028319	52012462,52029657	Gene ID= ENSG00000253710.2 TPM= 3.19 Transcript Type= protein_coding
chr13	52132643	52159861	52132643	52159861	-	ENST00000610828.4@NEK3	ENST00000610828.4	protein_coding	52159543,52156075,52154080,52153895,52152609,52151325,52151146,52148415,52144691,52143915,52141020,52136800,52136116,52135729,52133689,52132643	52159861,52156248,52154173,52153992,52152692,52151392,52151232,52148469,52144891,52143987,52141069,52136902,52136259,52135863,52133815,52133226	Gene ID= ENSG00000136098.16 TPM= 3.72 Transcript Type= protein_coding
chr13	52132651	52159614	52132651	52159614	-	transcript1159.chr13.nnic@NEK3	transcript1159.chr13.nnic	protein_coding	52159543,52154080,52153895,52152609,52151325,52151146,52148415,52144691,52143915,52141020,52136800,52136116,52135729,52133689,52132651	52159614,52154173,52153992,52152692,52151392,52151232,52148469,52144891,52143987,52141069,52136902,52136259,52135863,52133815,52133226	Gene ID= ENSG00000136098.16 TPM= 3.72 Transcript Type= NA
chr13	52148142	52159550	52148142	52159550	-	ENST00000552973.1@NEK3	ENST00000552973.1	protein_coding	52159543,52156075,52154080,52153895,52152609,52151325,52151146,52148142	52159550,52156248,52154173,52153992,52152692,52151392,52151232,52148469	Gene ID= ENSG00000136098.16 TPM= 1.06 Transcript Type= retained_intron
chr13	52167709	52194442	52167709	52194442	-	transcript1164.chr13.nnic@MRPS31P5	transcript1164.chr13.nnic	transcribed_unprocessed_pseudogene	52194254,52189639,52186683,52183976,52180582,52175639,52171158,52169987,52167709	52194442,52189914,52186823,52184114,52180654,52175776,52171248,52170056,52169304	Gene ID= ENSG00000243406.6 TPM= 3.19 Transcript Type= NA
chr13	52377167	52406494	52377167	52406494	-	ENST00000349258.8@THSD1	ENST00000349258.8	protein_coding	52406031,52402543,52397232,52377167	52406494,52402681,52398194,52378789	Gene ID= ENSG00000136114.15 TPM= 6.37 Transcript Type= protein_coding
chr13	52377187	52406128	52377187	52406128	-	ENST00000258613.4@THSD1	ENST00000258613.4	protein_coding	52406031,52402543,52397232,52386028,52377187	52406128,52402681,52398194,52386186,52378789	Gene ID= ENSG00000136114.15 TPM= 6.37 Transcript Type= protein_coding
chr13	52433691	52450669	52433691	52450669	-	transcript1188.chr13.nic@VPS36	transcript1188.chr13.nic	protein_coding	52450499,52442377,52439098,52436290,52434793,52433691	52450669,52442445,52439168,52436404,52434882,52433748	Gene ID= ENSG00000136100.12 TPM= 3.19 Transcript Type= NA
chr13	52423850	52432432	52423850	52432432	-	transcript1189.chr13.nic@VPS36	transcript1189.chr13.nic	protein_coding	52427187,52426989,52423850	52432432,52427066,52426066	Gene ID= ENSG00000136100.12 TPM= 7.44 Transcript Type= NA
chr13	52412602	52450622	52412602	52450622	-	ENST00000378060.8@VPS36	ENST00000378060.8	protein_coding	52450499,52442377,52439098,52436290,52434793,52433662,52427187,52426989,52425932,52423574,52417992,52417057,52416017,52412602	52450622,52442445,52439168,52436404,52434882,52433748,52427219,52427066,52426066,52423639,52418056,52417141,52416093,52415923	Gene ID= ENSG00000136100.12 TPM= 22.31 Transcript Type= protein_coding
chr13	52454775	52455331	52454775	52455331	-	ENST00000614364.1@AL359513.1	ENST00000614364.1	lincRNA	52454775	52455331	Gene ID= ENSG00000278238.1 TPM= 1.06 Transcript Type= lincRNA
chr13	52455439	52476349	52455439	52476349	+	ENST00000258607.9@CKAP2	ENST00000258607.9	protein_coding	52455439,52456523,52460899,52461058,52462363,52465295,52468278,52473829,52474895	52455626,52456607,52460974,52461926,52462567,52465465,52468347,52474084,52476349	Gene ID= ENSG00000136108.14 TPM= 2.12 Transcript Type= protein_coding
chr13	52455467	52476628	52455467	52476628	+	ENST00000378037.9@CKAP2	ENST00000378037.9	protein_coding	52455467,52456523,52460896,52461058,52462363,52465295,52468278,52473829,52474895	52455626,52456607,52460974,52461926,52462567,52465465,52468347,52474084,52476628	Gene ID= ENSG00000136108.14 TPM= 3.19 Transcript Type= protein_coding
chr13	52617485	52643796	52617485	52643796	+	transcript1200.chr13.nic@AL137058.2	transcript1200.chr13.nic	processed_transcript	52617485,52621989,52627438,52632422,52637305,52642369	52617682,52622264,52627578,52632494,52637446,52643796	Gene ID= ENSG00000273784.4 TPM= 267.66 Transcript Type= NA
chr13	52652839	52687872	52652839	52687872	+	ENST00000343788.10@SUGT1	ENST00000343788.10	protein_coding	52652839,52653046,52657532,52658399,52659179,52661475,52662649,52663096,52664035,52665637,52666812,52676230,52679974,52687734	52652958,52653103,52657622,52658468,52659249,52661570,52662702,52663112,52664057,52665733,52666919,52676320,52680155,52687872	Gene ID= ENSG00000165416.14 TPM= 11.68 Transcript Type= protein_coding
chr13	57631812	57729311	57631812	57729311	+	ENST00000377918.7@PCDH17	ENST00000377918.7	protein_coding	57631812,57666468,57666661,57724612	57635111,57666526,57666833,57729311	Gene ID= ENSG00000118946.11 TPM= 6.37 Transcript Type= protein_coding
chr13	60396457	60573878	60396457	60573878	+	ENST00000196169.7@TDRD3	ENST00000196169.7	protein_coding	60396457,60439688,60444687,60460380,60467238,60483775,60485799,60494435,60509763,60510630,60528367,60535108,60567525,60573613	60397010,60439772,60444748,60460540,60467379,60483846,60485948,60494575,60509919,60510755,60529217,60535233,60567650,60573878	Gene ID= ENSG00000083544.13 TPM= 5.31 Transcript Type= protein_coding
chr13	67222244	67224385	67222244	67224385	-	transcript1232.chr13.nnic@NA	transcript1232.chr13.nnic	NA	67222244	67224385	Gene ID= novel_gene_chr13_1233 TPM= 4.25 Transcript Type= NA
chr13	67201015	67230445	67201015	67230445	-	ENST00000377861.4@PCDH9	ENST00000377861.4	protein_coding	67229780,67201015	67230445,67228575	Gene ID= ENSG00000184226.14 TPM= 1.06 Transcript Type= protein_coding
chr13	66302834	67230445	66302834	67230445	-	ENST00000544246.5@PCDH9	ENST00000544246.5	protein_coding	67229780,67225405,66631210,66302834	67230445,67228575,66631411,66305028	Gene ID= ENSG00000184226.14 TPM= 5.31 Transcript Type= protein_coding
chr13	67225844	67230342	67225844	67230342	-	transcript1237.chr13.nnic@PCDH9	transcript1237.chr13.nnic	protein_coding	67230009,67225844	67230342,67228575	Gene ID= ENSG00000184226.14 TPM= 12.75 Transcript Type= NA
chr13	67230604	67231804	67230604	67231804	+	transcript1238.chr13.nnic@NA	transcript1238.chr13.nnic	NA	67230604	67231804	Gene ID= novel_gene_chr13_1239 TPM= 2.12 Transcript Type= NA
chr13	72708357	72727687	72708357	72727687	-	ENST00000377818.3@MZT1	ENST00000377818.3	protein_coding	72727524,72718952,72708357	72727687,72719097,72710345	Gene ID= ENSG00000204899.5 TPM= 25.49 Transcript Type= protein_coding
chr13	72752169	72781933	72752169	72781933	-	ENST00000377767.8@DIS3	ENST00000377767.8	protein_coding	72781605,72780846,72778187,72777420,72775925,72775211,72773946,72773684,72772693,72772159,72771795,72771081,72770904,72768785,72765972,72763451,72761923,72761646,72761363,72760529,72752169	72781933,72781003,72778380,72777493,72776092,72775375,72774059,72773821,72772839,72772275,72771896,72771145,72770988,72768912,72766058,72763607,72762137,72761814,72761521,72760651,72759878	Gene ID= ENSG00000083520.14 TPM= 1.06 Transcript Type= protein_coding
chr13	72757443	72781925	72757443	72781925	-	ENST00000377780.8@DIS3	ENST00000377780.8	protein_coding	72781605,72781289,72778187,72777420,72775925,72775211,72773946,72773684,72772693,72772159,72771795,72771081,72770904,72768785,72765972,72763451,72761923,72761646,72761363,72760529,72757443	72781925,72781356,72778380,72777493,72776092,72775375,72774059,72773821,72772839,72772275,72771896,72771145,72770988,72768912,72766058,72763607,72762137,72761814,72761521,72760651,72759878	Gene ID= ENSG00000083520.14 TPM= 4.25 Transcript Type= protein_coding
chr13	72782059	73016461	72782059	73016461	+	ENST00000326291.10@PIBF1	ENST00000326291.10	protein_coding	72782059,72783423,72792447,72795359,72797907,72821849,72827010,72827733,72835243,72854057,72893784,72908531,72917076,72931165,72965274,72973591,72998822,73015869	72782349,72783721,72792547,72795557,72798026,72821982,72827118,72827914,72835368,72854155,72893949,72908681,72917166,72931267,72965404,72973675,72998995,73016461	Gene ID= ENSG00000083535.15 TPM= 9.56 Transcript Type= protein_coding
chr13	73058792	73077542	73058792	73077542	+	ENST00000377687.5@KLF5	ENST00000377687.5	protein_coding	73058792,73061861,73063824,73075708	73059588,73062734,73063883,73077542	Gene ID= ENSG00000102554.13 TPM= 7.44 Transcript Type= protein_coding
chr13	73686019	73688839	73686019	73688839	-	transcript1276.chr13.nnic@NA	transcript1276.chr13.nnic	NA	73686019	73688839	Gene ID= novel_gene_chr13_1277 TPM= 2.12 Transcript Type= NA
chr13	74078138	74082176	74078138	74082176	+	transcript1274.chr13.nnic@NA	transcript1274.chr13.nnic	NA	74078138	74082176	Gene ID= novel_gene_chr13_1275 TPM= 11.68 Transcript Type= NA
chr13	75284672	75482569	75284672	75482569	-	transcript1281.chr13.nnic@TBC1D4	transcript1281.chr13.nnic	protein_coding	75481270,75362026,75359769,75356147,75349170,75341496,75341125,75336921,75326197,75324237,75312738,75309942,75306313,75302243,75299330,75294854,75292102,75288934,75284672	75482569,75362607,75359858,75356251,75349302,75341587,75341235,75337040,75326423,75324401,75312898,75310151,75306471,75302401,75299574,75295013,75292271,75289110,75287025	Gene ID= ENSG00000136111.12 TPM= 13.52 Transcript Type= NA
chr13	75309961	75482338	75309961	75482338	-	transcript1284.chr13.nic@TBC1D4	transcript1284.chr13.nic	protein_coding	75481270,75362026,75359769,75356147,75349170,75341496,75341125,75336921,75327752,75326197,75324237,75312738,75309961	75482338,75362607,75359858,75356251,75349302,75341587,75341235,75337040,75327826,75326423,75324401,75312898,75310151	Gene ID= ENSG00000136111.12 TPM= 4.84 Transcript Type= NA
chr13	75310035	75482338	75310035	75482338	-	transcript1290.chr13.nic@TBC1D4	transcript1290.chr13.nic	protein_coding	75481270,75362026,75359769,75356147,75349170,75341496,75341125,75336921,75327752,75326197,75312738,75310035	75482338,75362607,75359858,75356251,75349302,75341587,75341235,75337040,75327826,75326423,75312898,75310151	Gene ID= ENSG00000136111.12 TPM= 5.11 Transcript Type= NA
chr13	75310035	75482168	75310035	75482168	-	transcript1293.chr13.nnic@TBC1D4	transcript1293.chr13.nnic	protein_coding	75481270,75362026,75359769,75356147,75349170,75341496,75341125,75336921,75326197,75312738,75310035	75482168,75362607,75359858,75356251,75349302,75341587,75341235,75337040,75326423,75312898,75310151	Gene ID= ENSG00000136111.12 TPM= 2.8 Transcript Type= NA
chr13	75284665	75482114	75284665	75482114	-	ENST00000431480.6@TBC1D4	ENST00000431480.6	protein_coding	75481270,75362026,75359769,75356147,75349170,75341496,75341125,75336921,75327752,75326197,75324237,75312738,75309942,75306313,75302243,75299330,75294854,75292102,75288934,75284665	75482114,75362607,75359858,75356251,75349302,75341587,75341235,75337040,75327826,75326423,75324401,75312898,75310151,75306471,75302401,75299574,75295013,75292271,75289110,75287025	Gene ID= ENSG00000136111.12 TPM= 18.85 Transcript Type= protein_coding
chr13	75457149	75462555	75457149	75462555	+	transcript1299.chr13.nnic@NA	transcript1299.chr13.nnic	NA	75457149	75462555	Gene ID= novel_gene_chr13_1300 TPM= 2.12 Transcript Type= NA
chr13	75525219	75538802	75525219	75538802	-	ENST00000377615.7@COMMD6	ENST00000377615.7	protein_coding	75538753,75537764,75537664,75530114,75525219	75538802,75537920,75537675,75530266,75526639	Gene ID= ENSG00000188243.12 TPM= 212.43 Transcript Type= protein_coding
chr13	75526436	75537850	75526436	75537850	-	transcript1305.chr13.nnic@COMMD6	transcript1305.chr13.nnic	protein_coding	75537760,75530114,75526436	75537850,75530266,75526639	Gene ID= ENSG00000188243.12 TPM= 10.97 Transcript Type= NA
chr13	75526436	75537841	75526436	75537841	-	ENST00000497707.5@COMMD6	ENST00000497707.5	protein_coding	75537764,75537664,75530311,75526436	75537841,75537675,75530408,75526639	Gene ID= ENSG00000188243.12 TPM= 1.41 Transcript Type= processed_transcript
chr13	75526436	75537841	75526436	75537841	-	ENST00000355801.4@COMMD6	ENST00000355801.4	protein_coding	75537764,75537664,75530114,75527813,75526436	75537841,75537675,75530266,75527851,75526639	Gene ID= ENSG00000188243.12 TPM= 1.41 Transcript Type= protein_coding
chr13	75549756	75605933	75549756	75605933	+	transcript1331.chr13.nic@UCHL3	transcript1331.chr13.nic	protein_coding	75549756,75549976,75560753,75566695,75567227,75569460,75589938,75594915,75604769,75605729	75549862,75549987,75560881,75566851,75567312,75569507,75590129,75594990,75604827,75605933	Gene ID= ENSG00000118939.17 TPM= 3.19 Transcript Type= NA
chr13	75549483	75605933	75549483	75605933	+	transcript1336.chr13.nic@UCHL3	transcript1336.chr13.nic	protein_coding	75549483,75549976,75560753,75566695,75567227,75569460,75594915,75604769,75605729	75549670,75549987,75560881,75566851,75567312,75569507,75594990,75604827,75605933	Gene ID= ENSG00000118939.17 TPM= 3.19 Transcript Type= NA
chr13	75549791	75605933	75549791	75605933	+	ENST00000377595.7@UCHL3	ENST00000377595.7	protein_coding	75549791,75549976,75560753,75566695,75567227,75569460,75594915,75604769,75605729	75549862,75549987,75560881,75566851,75567312,75569507,75594990,75604827,75605933	Gene ID= ENSG00000118939.17 TPM= 65.85 Transcript Type= protein_coding
chr13	75550722	75553823	75550722	75553823	-	transcript1357.chr13.nnic@NA	transcript1357.chr13.nnic	NA	75550722	75553823	Gene ID= novel_gene_chr13_1358 TPM= 2.12 Transcript Type= NA
chr13	75604826	75635994	75604826	75635994	-	ENST00000568735.1@LMO7-AS1	ENST00000568735.1	antisense_RNA	75635829,75622260,75618770,75604826	75635994,75622303,75618906,75604945	Gene ID= ENSG00000261105.5 TPM= 1.06 Transcript Type= antisense_RNA
chr13	75804178	75858675	75804178	75858675	+	transcript1312.chr13.nic@LMO7	transcript1312.chr13.nic	protein_coding	75804178,75809154,75817161,75819393,75821177,75823565,75833051,75834226,75835152,75836397,75838140,75838347,75840085,75840391,75841109,75841628,75842851,75845327,75849079,75853092,75855260,75856506,75857921	75804541,75809183,75817278,75819535,75821609,75823873,75833165,75834387,75835339,75836457,75838196,75838388,75840110,75840495,75841201,75841983,75842916,75845379,75849292,75853388,75855368,75856608,75858675	Gene ID= ENSG00000136153.19 TPM= 26.01 Transcript Type= NA
chr13	75804178	75858675	75804178	75858675	+	transcript1313.chr13.nic@LMO7	transcript1313.chr13.nic	protein_coding	75804178,75809154,75817161,75819393,75821177,75823565,75833051,75834226,75835233,75836397,75838140,75838347,75840085,75840391,75841109,75841628,75842851,75845327,75849079,75853092,75855260,75856506,75857921	75804541,75809183,75817278,75819535,75821609,75823873,75833165,75834387,75835339,75836457,75838196,75838388,75840110,75840495,75841201,75841983,75842916,75845379,75849292,75853388,75855368,75856608,75858675	Gene ID= ENSG00000136153.19 TPM= 14.33 Transcript Type= NA
chr13	75804178	75858675	75804178	75858675	+	transcript1315.chr13.nnic@LMO7	transcript1315.chr13.nnic	protein_coding	75804178,75809154,75817161,75819393,75821177,75823565,75833051,75834226,75835152,75836397,75838347,75840085,75840391,75841109,75841628,75842851,75845327,75849079,75853092,75855260,75856506,75857921	75804541,75809183,75817278,75819535,75821609,75823873,75833165,75834387,75835339,75836457,75838388,75840110,75840495,75841201,75841983,75842916,75845379,75849292,75853388,75855368,75856608,75858675	Gene ID= ENSG00000136153.19 TPM= 14.86 Transcript Type= NA
chr13	75804178	75858675	75804178	75858675	+	transcript1316.chr13.nnic@LMO7	transcript1316.chr13.nnic	protein_coding	75804178,75809154,75817161,75819393,75821177,75823565,75833051,75834226,75835233,75836397,75838347,75840085,75840391,75841109,75841628,75842851,75845327,75849079,75853092,75855260,75856506,75857921	75804541,75809183,75817278,75819535,75821609,75823873,75833165,75834387,75835339,75836457,75838388,75840110,75840495,75841201,75841983,75842916,75845379,75849292,75853388,75855368,75856608,75858675	Gene ID= ENSG00000136153.19 TPM= 19.11 Transcript Type= NA
chr13	75804178	75858675	75804178	75858675	+	transcript1317.chr13.nic@LMO7	transcript1317.chr13.nic	protein_coding	75804178,75809154,75817161,75819393,75821177,75823565,75833051,75834226,75835152,75836397,75840085,75840391,75841109,75841628,75842851,75845327,75849079,75853092,75855260,75856506,75857921	75804541,75809183,75817278,75819535,75821609,75823873,75833165,75834387,75835339,75836457,75840110,75840495,75841201,75841983,75842916,75845379,75849292,75853388,75855368,75856608,75858675	Gene ID= ENSG00000136153.19 TPM= 16.1 Transcript Type= NA
chr13	75636323	75845368	75636323	75845368	+	ENST00000377499.9@LMO7	ENST00000377499.9	protein_coding	75636323,75713182,75727029,75760932,75795401,75796636,75800684,75804289,75809154,75817161,75819393,75821177,75823565,75833051,75834226,75835233,75836397,75838140,75840085,75840391,75841109,75841628,75842851,75845327	75636726,75713252,75727098,75761038,75795431,75796749,75800882,75804541,75809183,75817278,75819535,75821609,75823873,75833165,75834387,75835339,75836457,75838196,75840110,75840495,75841201,75841983,75842916,75845368	Gene ID= ENSG00000136153.19 TPM= 2.12 Transcript Type= protein_coding
chr13	75760434	75858672	75760434	75858672	+	ENST00000321797.12@LMO7	ENST00000321797.12	protein_coding	75760434,75760932,75795401,75796636,75800684,75804289,75805479,75807480,75809154,75817161,75819393,75821177,75823565,75833051,75834226,75835233,75836397,75838140,75840085,75840391,75841109,75841628,75842851,75845327,75849079,75853092,75855260,75856506,75857921	75760665,75761038,75795431,75796749,75800882,75804541,75805760,75808199,75809183,75817278,75819535,75821609,75823873,75833165,75834387,75835339,75836457,75838196,75840110,75840495,75841201,75841983,75842916,75845379,75849292,75853388,75855368,75856608,75858672	Gene ID= ENSG00000136153.19 TPM= 5.05 Transcript Type= protein_coding
chr13	75760521	75819441	75760521	75819441	+	transcript1334.chr13.nic@LMO7	transcript1334.chr13.nic	protein_coding	75760521,75760932,75795401,75796636,75800684,75804289,75807480,75809154,75817161,75819393	75760665,75761038,75795431,75796749,75800882,75804541,75808199,75809183,75817278,75819441	Gene ID= ENSG00000136153.19 TPM= 3.4 Transcript Type= NA
chr13	75788855	75819441	75788855	75819441	+	transcript1345.chr13.nic@LMO7	transcript1345.chr13.nic	protein_coding	75788855,75795401,75796636,75800684,75804289,75809154,75817161,75819393	75789087,75795431,75796749,75800882,75804541,75809183,75817278,75819441	Gene ID= ENSG00000136153.19 TPM= 3.75 Transcript Type= NA
chr13	75788838	75817278	75788838	75817278	+	ENST00000497947.6@LMO7	ENST00000497947.6	protein_coding	75788838,75795401,75796636,75800684,75804289,75809154,75817161	75789087,75795431,75796749,75800882,75804541,75809183,75817278	Gene ID= ENSG00000136153.19 TPM= 1.06 Transcript Type= protein_coding
chr13	75804172	75819441	75804172	75819441	+	transcript1348.chr13.nic@LMO7	transcript1348.chr13.nic	protein_coding	75804172,75807480,75809154,75817161,75819393	75804541,75808199,75809183,75817278,75819441	Gene ID= ENSG00000136153.19 TPM= 5.52 Transcript Type= NA
chr13	75626597	75630189	75626597	75630189	-	transcript1355.chr13.nnic@NA	transcript1355.chr13.nnic	NA	75626597	75630189	Gene ID= novel_gene_chr13_1356 TPM= 4.25 Transcript Type= NA
chr13	76990660	77005117	76990660	77005117	+	ENST00000636183.1@CLN5	ENST00000636183.1	protein_coding	76990660,76995063,76995902,77000458	76992271,76995228,76996127,77005117	Gene ID= ENSG00000102805.14 TPM= 8.5 Transcript Type= protein_coding
chr13	76992059	76997863	76992059	76997863	+	ENST00000485938.3@CLN5	ENST00000485938.3	protein_coding	76992059,76995063,76995902	76992271,76995228,76997863	Gene ID= ENSG00000102805.14 TPM= 1.06 Transcript Type= protein_coding
chr13	76992084	77002506	76992084	77002506	+	ENST00000377453.8@CLN5	ENST00000377453.8	protein_coding	76992084,76995063,76995902,77000458	76992271,76995228,76996127,77002506	Gene ID= ENSG00000102805.14 TPM= 10.62 Transcript Type= protein_coding
chr13	76992044	77002477	76992044	77002477	+	ENST00000636780.1@CLN5	ENST00000636780.1	protein_coding	76992044,76995063,76995902,76998043,77000458	76992271,76995228,76996127,76998085,77002477	Gene ID= ENSG00000102805.14 TPM= 1.06 Transcript Type= protein_coding
chr13	77005254	77027186	77005254	77027186	-	transcript1375.chr13.nnic@FBXL3	transcript1375.chr13.nnic	protein_coding	77026827,77018600,77015409,77005254	77027186,77018722,77015580,77007788	Gene ID= ENSG00000005812.10 TPM= 10.62 Transcript Type= NA
chr13	77005254	77027150	77005254	77027150	-	ENST00000355619.9@FBXL3	ENST00000355619.9	protein_coding	77026827,77021513,77018600,77015409,77005254	77027150,77021861,77018722,77015580,77007788	Gene ID= ENSG00000005812.10 TPM= 39.3 Transcript Type= protein_coding
chr13	77065723	77068412	77065723	77068412	+	transcript1382.chr13.nnic@NA	transcript1382.chr13.nnic	NA	77065723	77068412	Gene ID= novel_gene_chr13_1383 TPM= 2.12 Transcript Type= NA
chr13	77270031	77327112	77270031	77327112	-	transcript1384.chr13.nic@MYCBP2	transcript1384.chr13.nic	protein_coding	77326474,77296599,77288161,77278758,77273472,77270296,77270031	77327112,77296674,77288376,77278911,77273668,77270538,77270063	Gene ID= ENSG00000005810.17 TPM= 6.37 Transcript Type= NA
chr13	77243485	77246681	77243485	77246681	+	transcript1385.chr13.nnic@NA	transcript1385.chr13.nnic	NA	77243485	77246681	Gene ID= novel_gene_chr13_1386 TPM= 3.19 Transcript Type= NA
chr13	77895489	77918810	77895489	77918810	-	ENST00000334286.7@EDNRB	ENST00000334286.7	protein_coding	77918091,77903495,77903156,77901058,77900521,77899859,77895489	77918810,77903607,77903360,77901207,77900654,77899967,77898334	Gene ID= ENSG00000136160.14 TPM= 4.25 Transcript Type= protein_coding
chr13	78614291	78659179	78614291	78659179	-	ENST00000282003.6@RNF219	ENST00000282003.6	protein_coding	78659049,78644862,78642122,78638823,78635110,78614291	78659179,78644997,78642213,78639071,78635198,78617122	Gene ID= ENSG00000152193.7 TPM= 13.81 Transcript Type= protein_coding
chr13	79319954	79406215	79319954	79406215	-	ENST00000438737.2@RBM26	ENST00000438737.2	protein_coding	79405704,79378789,79377379,79371842,79370945,79368730,79366633,79366055,79365578,79359575,79358274,79355220,79354439,79353153,79344669,79344248,79342664,79341123,79337102,79334344,79322349,79319954	79406215,79378907,79377515,79371930,79371162,79368990,79366872,79366195,79365718,79359686,79358433,79355384,79354570,79353224,79344794,79344322,79342831,79341227,79337302,79334430,79322462,79320710	Gene ID= ENSG00000139746.15 TPM= 2.12 Transcript Type= protein_coding
chr13	79349705	79353101	79349705	79353101	-	transcript1418.chr13.nnic@NA	transcript1418.chr13.nnic	NA	79349705	79353101	Gene ID= novel_gene_chr13_1419 TPM= 2.12 Transcript Type= NA
chr13	79394827	79397701	79394827	79397701	+	transcript1414.chr13.nnic@NA	transcript1414.chr13.nnic	NA	79394827	79397701	Gene ID= novel_gene_chr13_1415 TPM= 10.62 Transcript Type= NA
chr13	79400768	79403103	79400768	79403103	+	transcript1416.chr13.nnic@NA	transcript1416.chr13.nnic	NA	79400768	79403103	Gene ID= novel_gene_chr13_1417 TPM= 4.25 Transcript Type= NA
chr13	79402437	79406204	79402437	79406204	-	transcript1420.chr13.nnic@NA	transcript1420.chr13.nnic	NA	79402437	79406204	Gene ID= novel_gene_chr13_1421 TPM= 2.12 Transcript Type= NA
chr13	79481297	79552920	79481297	79552920	+	transcript1424.chr13.nnic@NDFIP2	transcript1424.chr13.nnic	protein_coding	79481297,79481858,79520810,79533323,79539682,79543558,79548328,79551017,79552516	79481524,79481950,79520975,79533456,79539775,79543682,79548394,79551122,79552920	Gene ID= ENSG00000102471.13 TPM= 3.19 Transcript Type= NA
chr13	79481152	79556075	79481152	79556075	+	ENST00000218652.11@NDFIP2	ENST00000218652.11	protein_coding	79481152,79520810,79533323,79539682,79543558,79548328,79551017,79552516	79481524,79520975,79533456,79539775,79543682,79548394,79551122,79556075	Gene ID= ENSG00000102471.13 TPM= 3.19 Transcript Type= protein_coding
chr13	79481399	79554096	79481399	79554096	+	transcript1432.chr13.nnic@NDFIP2	transcript1432.chr13.nnic	protein_coding	79481399,79520810,79533323,79539682,79551017,79552516	79481524,79520975,79533456,79539775,79551122,79554096	Gene ID= ENSG00000102471.13 TPM= 2.12 Transcript Type= NA
chr13	79481474	79554096	79481474	79554096	+	ENST00000620924.1@NDFIP2	ENST00000620924.1	protein_coding	79481474,79520810,79533323,79539682,79543558,79548328,79551017,79552516	79481524,79520975,79533456,79539775,79543682,79548394,79551122,79554096	Gene ID= ENSG00000102471.13 TPM= 5.31 Transcript Type= protein_coding
chr13	80335976	80339659	80335976	80339659	-	ENST00000377102.5@SPRY2	ENST00000377102.5	protein_coding	80338733,80335976	80339659,80337756	Gene ID= ENSG00000136158.11 TPM= 3.19 Transcript Type= protein_coding
chr13	80335976	80339310	80335976	80339310	-	transcript1437.chr13.nnic@SPRY2	transcript1437.chr13.nnic	protein_coding	80338839,80335976	80339310,80337756	Gene ID= ENSG00000136158.11 TPM= 5.31 Transcript Type= NA
chr13	80335976	80340570	80335976	80340570	-	transcript1438.chr13.nnic@SPRY2	transcript1438.chr13.nnic	protein_coding	80339858,80335976	80340570,80337756	Gene ID= ENSG00000136158.11 TPM= 4.25 Transcript Type= NA
chr13	80335977	80341335	80335977	80341335	-	transcript1440.chr13.nnic@NA	transcript1440.chr13.nnic	NA	80335977	80341335	Gene ID= novel_gene_chr13_1441 TPM= 4.25 Transcript Type= NA
chr13	94574051	94596257	94574051	94596257	-	ENST00000261296.6@TGDS	ENST00000261296.6	protein_coding	94596051,94593841,94592241,94590853,94583094,94581091,94579894,94578730,94578005,94577371,94576314,94574051	94596257,94593907,94592309,94590943,94583236,94581189,94579953,94578773,94578170,94577429,94576411,94574852	Gene ID= ENSG00000088451.10 TPM= 1.06 Transcript Type= protein_coding
chr13	95019829	95301429	95019829	95301429	-	ENST00000376887.8@ABCC4	ENST00000376887.8	protein_coding	95301241,95247643,95246975,95234610,95210692,95209434,95207800,95206532,95194836,95188453,95186701,95177997,95177707,95170532,95166158,95164378,95163610,95163122,95161189,95115922,95083140,95075432,95074214,95073204,95071662,95062704,95053095,95044266,95043682,95034605,95019829	95301429,95247753,95247095,95234834,95210781,95209597,95207925,95206781,95194937,95188542,95186892,95178091,95177793,95170628,95166367,95164518,95163647,95163216,95161335,95116001,95083290,95075551,95074324,95073304,95071853,95062859,95053184,95044438,95043787,95034739,95021682	Gene ID= ENSG00000125257.13 TPM= 2.12 Transcript Type= protein_coding
chr13	95672835	95676925	95672835	95676925	-	ENST00000499499.2@DNAJC3-AS1	ENST00000499499.2	lincRNA	95675852,95672835	95676925,95674668	Gene ID= ENSG00000247400.3 TPM= 2.12 Transcript Type= lincRNA
chr13	95677141	95794989	95677141	95794989	+	transcript1476.chr13.nnic@DNAJC3	transcript1476.chr13.nnic	protein_coding	95677141,95705548,95708461,95709227,95723242,95725178,95757644,95760040,95760679,95763643,95763833,95785939,95787007,95790873	95677337,95705681,95708564,95709337,95723366,95725252,95757796,95760221,95760798,95763748,95763953,95786071,95787155,95794989	Gene ID= ENSG00000102580.14 TPM= 2.12 Transcript Type= NA
chr13	95677110	95787081	95677110	95787081	+	transcript1480.chr13.nic@DNAJC3	transcript1480.chr13.nic	protein_coding	95677110,95709227,95723242,95725178,95757644,95760040,95760679,95763643,95763833,95785939,95787007	95677337,95709337,95723366,95725252,95757796,95760221,95760798,95763748,95763953,95786071,95787081	Gene ID= ENSG00000102580.14 TPM= 12.75 Transcript Type= NA
chr13	95677110	95745757	95677110	95745757	+	transcript1484.chr13.nnic@DNAJC3	transcript1484.chr13.nnic	protein_coding	95677110,95709227,95723242,95725178,95742634	95677337,95709337,95723366,95725252,95745757	Gene ID= ENSG00000102580.14 TPM= 2.12 Transcript Type= NA
chr13	95677139	95794989	95677139	95794989	+	ENST00000602402.5@DNAJC3	ENST00000602402.5	protein_coding	95677139,95709227,95723242,95725178,95757644,95760040,95760679,95763643,95763833,95785939,95787007,95790873	95677337,95709337,95723366,95725252,95757796,95760221,95760798,95763748,95763953,95786071,95787155,95794989	Gene ID= ENSG00000102580.14 TPM= 53.11 Transcript Type= protein_coding
chr13	95801580	96053383	95801580	96053383	-	ENST00000376747.7@UGGT2	ENST00000376747.7	protein_coding	96053155,96031889,96023629,96023040,96013307,95999211,95996063,95989973,95986333,95983804,95972580,95970112,95949335,95947996,95947037,95939957,95936924,95927213,95927028,95925680,95902854,95900807,95895180,95894562,95890862,95887892,95884491,95877698,95877279,95867339,95863629,95860788,95859591,95856158,95854315,95853543,95837086,95832927,95801580	96053383,96031971,96023759,96023152,96013481,95999307,95996135,95990073,95986432,95983864,95972671,95970262,95949454,95948081,95947172,95940091,95937088,95927336,95927126,95925774,95903060,95900938,95895304,95894657,95890964,95887971,95884680,95877856,95877364,95867423,95863714,95860883,95859675,95856340,95854475,95853657,95837202,95833053,95801812	Gene ID= ENSG00000102595.19 TPM= 3.19 Transcript Type= protein_coding
chr13	95984910	96053400	95984910	96053400	-	ENST00000397618.7@UGGT2	ENST00000397618.7	protein_coding	96053155,96031889,96023629,96023040,96013307,95999211,95996063,95989973,95986333,95984910	96053400,96031971,96023759,96023152,96013481,95999307,95996135,95990073,95986432,95985337	Gene ID= ENSG00000102595.19 TPM= 1.06 Transcript Type= protein_coding
chr13	95977141	95979560	95977141	95979560	+	transcript1494.chr13.nnic@NA	transcript1494.chr13.nnic	NA	95977141	95979560	Gene ID= novel_gene_chr13_1495 TPM= 5.31 Transcript Type= NA
chr13	97222286	97394119	97222286	97394119	+	transcript1496.chr13.nic@MBNL2	transcript1496.chr13.nic	protein_coding	97222286,97275632,97334276,97343016,97346804,97356796,97357482,97391322	97222531,97276409,97334440,97343216,97347067,97356849,97357635,97394119	Gene ID= ENSG00000139793.18 TPM= 10.44 Transcript Type= NA
chr13	97222286	97394119	97222286	97394119	+	transcript1502.chr13.nnic@MBNL2	transcript1502.chr13.nnic	protein_coding	97222286,97275632,97334276,97343016,97357482,97391322	97222531,97276409,97334440,97343216,97357635,97394119	Gene ID= ENSG00000139793.18 TPM= 4.6 Transcript Type= NA
chr13	97222286	97278277	97222286	97278277	+	transcript1507.chr13.nic@MBNL2	transcript1507.chr13.nic	protein_coding	97222286,97275632	97222531,97278277	Gene ID= ENSG00000139793.18 TPM= 5.31 Transcript Type= NA
chr13	97222296	97394119	97222296	97394119	+	ENST00000343600.8@MBNL2	ENST00000343600.8	protein_coding	97222296,97275632,97334276,97343016,97346804,97357482,97391322	97222531,97276409,97334440,97343216,97347067,97357635,97394119	Gene ID= ENSG00000139793.18 TPM= 56.11 Transcript Type= protein_coding
chr13	97976632	98021882	97976632	98021882	+	ENST00000490680.5@IPO5	ENST00000490680.5	protein_coding	97976632,97982503,97985421,97989062,97990126,97990433,97992892,97993105,97997531,98000539,98002467,98002684,98002864,98006130,98008059,98009881,98010103,98012246,98014042,98015530,98015726,98016729,98018485,98019581,98020992,98021736	97976786,97982583,97985613,97989164,97990222,97990537,97993014,97993225,97997618,98000645,98002591,98002773,98003037,98006348,98008142,98010013,98010224,98012342,98014214,98015641,98015781,98016851,98018704,98019809,98021133,98021882	Gene ID= ENSG00000065150.18 TPM= 18.06 Transcript Type= protein_coding
chr13	98140940	98143949	98140940	98143949	-	transcript1534.chr13.nnic@NA	transcript1534.chr13.nnic	NA	98140940	98143949	Gene ID= novel_gene_chr13_1535 TPM= 2.12 Transcript Type= NA
chr13	98143098	98449771	98143098	98449771	+	ENST00000627049.2@FARP1	ENST00000627049.2	protein_coding	98143098,98213220,98343762,98365395,98368117,98377821,98384730,98385667,98388383,98389957,98390812,98393643,98395227,98409338,98410734,98411901,98424572,98431043,98435576,98437766,98438804,98439107,98439961,98440123,98440670,98446098,98446666,98448236	98143492,98213413,98343866,98365437,98368195,98377918,98384844,98385814,98388478,98390120,98390880,98393718,98395476,98409525,98410823,98412034,98424650,98431280,98435706,98437858,98438872,98439196,98440043,98440235,98440836,98446205,98446817,98449771	Gene ID= ENSG00000152767.16 TPM= 13.81 Transcript Type= protein_coding
chr13	98247187	98250821	98247187	98250821	-	transcript1536.chr13.nnic@NA	transcript1536.chr13.nnic	NA	98247187	98250821	Gene ID= novel_gene_chr13_1537 TPM= 2.12 Transcript Type= NA
chr13	98452159	98576226	98452159	98576226	-	transcript1540.chr13.nic@STK24	transcript1540.chr13.nic	protein_coding	98575995,98519243,98482265,98475250,98474821,98466376,98463691,98461774,98460372,98457168,98452159	98576226,98519473,98482321,98475358,98474978,98466561,98463836,98461897,98460440,98457304,98453209	Gene ID= ENSG00000102572.14 TPM= 16.99 Transcript Type= NA
chr13	98891264	98895677	98891264	98895677	+	transcript1550.chr13.nnic@NA	transcript1550.chr13.nnic	NA	98891264	98895677	Gene ID= novel_gene_chr13_1551 TPM= 2.12 Transcript Type= NA
chr13	99086410	99088624	99086410	99088624	+	transcript1552.chr13.nnic@NA	transcript1552.chr13.nnic	NA	99086410	99088624	Gene ID= novel_gene_chr13_1553 TPM= 4.25 Transcript Type= NA
chr13	99196377	99200710	99196377	99200710	-	ENST00000426037.6@UBAC2-AS1	ENST00000426037.6	lincRNA	99200366,99196377	99200710,99197802	Gene ID= ENSG00000228889.6 TPM= 1.06 Transcript Type= lincRNA
chr13	99200879	99386427	99200879	99386427	+	transcript1562.chr13.nnic@UBAC2	transcript1562.chr13.nnic	protein_coding	99200879,99238427,99243832,99244515,99314097,99314603,99318022,99340320,99367787,99385228	99200939,99238554,99243951,99244624,99314220,99314839,99318069,99340565,99367906,99386427	Gene ID= ENSG00000134882.15 TPM= 8.48 Transcript Type= NA
chr13	99200854	99386427	99200854	99386427	+	transcript1569.chr13.nic@UBAC2	transcript1569.chr13.nic	protein_coding	99200854,99201429,99238427,99243832,99244515,99314097,99318022,99340320,99367787,99385228	99200939,99201567,99238554,99243951,99244624,99314220,99318069,99340565,99367906,99386427	Gene ID= ENSG00000134882.15 TPM= 12.72 Transcript Type= NA
chr13	99200854	99386427	99200854	99386427	+	transcript1581.chr13.nnic@UBAC2	transcript1581.chr13.nnic	protein_coding	99200854,99238427,99243832,99244515,99314097,99318022,99367787,99385228	99200939,99238554,99243951,99244624,99314220,99318069,99367906,99386427	Gene ID= ENSG00000134882.15 TPM= 14.19 Transcript Type= NA
chr13	99606652	99878476	99606652	99878476	+	transcript1606.chr13.nnic@CLYBL	transcript1606.chr13.nnic	protein_coding	99606652,99772824,99858861,99862991,99864818,99866240,99870938,99877598	99606757,99773010,99859049,99863092,99864911,99866407,99871062,99878476	Gene ID= ENSG00000125246.15 TPM= 3.19 Transcript Type= NA
chr13	99606652	99892564	99606652	99892564	+	transcript1609.chr13.nic@CLYBL	transcript1609.chr13.nic	protein_coding	99606652,99772824,99858861,99864818,99866240,99870938,99891318,99892443	99606757,99773010,99859049,99864911,99866407,99871062,99891437,99892564	Gene ID= ENSG00000125246.15 TPM= 7.44 Transcript Type= NA
chr13	99606652	99865238	99606652	99865238	+	transcript1616.chr13.nic@CLYBL	transcript1616.chr13.nic	protein_coding	99606652,99772824,99858861,99864818	99606757,99773010,99859049,99865238	Gene ID= ENSG00000125246.15 TPM= 4.25 Transcript Type= NA
chr13	99606696	99892564	99606696	99892564	+	ENST00000339105.8@CLYBL	ENST00000339105.8	protein_coding	99606696,99772824,99858861,99862991,99864818,99866240,99870938,99891318,99892443	99606757,99773010,99859049,99863092,99864911,99866407,99871062,99891437,99892564	Gene ID= ENSG00000125246.15 TPM= 16.99 Transcript Type= protein_coding
chr13	99606690	99891613	99606690	99891613	+	ENST00000376354.5@CLYBL	ENST00000376354.5	protein_coding	99606690,99772824,99858861,99864818,99866240,99870938,99891318	99606757,99773010,99859049,99864911,99866407,99871062,99891613	Gene ID= ENSG00000125246.15 TPM= 4.25 Transcript Type= protein_coding
chr13	100089015	100530432	100089015	100530432	+	ENST00000376279.7@PCCA	ENST00000376279.7	protein_coding	100089015,100102883,100111841,100111993,100154979,100157287,100209332,100235842,100257595,100262729,100268689,100273196,100301460,100302924,100307192,100309833,100330561,100340157,100368472,100425633,100449252,100527675,100530098	100089225,100102960,100111888,100112061,100155092,100157340,100209463,100235878,100257673,100262831,100268783,100273346,100301603,100302998,100307260,100309908,100330671,100340259,100368574,100425731,100449305,100527752,100530432	Gene ID= ENSG00000175198.15 TPM= 7.97 Transcript Type= protein_coding
chr13	100089083	100530435	100089083	100530435	+	ENST00000376285.5@PCCA	ENST00000376285.5	protein_coding	100089083,100102883,100111841,100111993,100154979,100157287,100209332,100235842,100257595,100262729,100268689,100273196,100301460,100302924,100307192,100309833,100330561,100340157,100368472,100425633,100449252,100515427,100527675,100530098	100089225,100102960,100111888,100112061,100155092,100157340,100209463,100235878,100257673,100262831,100268783,100273346,100301603,100302998,100307260,100309908,100330671,100340259,100368574,100425731,100449305,100515567,100527752,100530435	Gene ID= ENSG00000175198.15 TPM= 67.45 Transcript Type= protein_coding
chr13	100603927	100674879	100603927	100674879	-	ENST00000376234.7@TMTC4	ENST00000376234.7	protein_coding	100674744,100668579,100664221,100662964,100656381,100642211,100637930,100637538,100636532,100635024,100634805,100626071,100625785,100625535,100614316,100612398,100606358,100603927	100674879,100668794,100664336,100663180,100656468,100642311,100638022,100637702,100636734,100635195,100634936,100626150,100625892,100625676,100614430,100612510,100606427,100605142	Gene ID= ENSG00000125247.15 TPM= 2.12 Transcript Type= protein_coding
chr13	101053776	101416355	101053776	101416355	-	ENST00000251127.10@NALCN	ENST00000251127.10	protein_coding	101416313,101399019,101395183,101378570,101376917,101376700,101345266,101292224,101291990,101283933,101258443,101237755,101229393,101191917,101176300,101144760,101143080,101124608,101111125,101110619,101107698,101107487,101104894,101104530,101104295,101103172,101100784,101095574,101089846,101089663,101083711,101083092,101082809,101081527,101075873,101074514,101073584,101068695,101067918,101065404,101061968,101059818,101057939,101053776	101416355,101399165,101395365,101378653,101377056,101376828,101345420,101292366,101292094,101284019,101258574,101237922,101229584,101192054,101176374,101144896,101143221,101124681,101111226,101110688,101107789,101107609,101104950,101104650,101104426,101103339,101100888,101095680,101089966,101089761,101083804,101083198,101082883,101081646,101075941,101074662,101073677,101068827,101068033,101065561,101062118,101059967,101058056,101055488	Gene ID= ENSG00000102452.15 TPM= 1.06 Transcript Type= protein_coding
chr13	101452615	101716444	101452615	101716444	+	ENST00000376180.7@ITGBL1	ENST00000376180.7	protein_coding	101452615,101453883,101567699,101575424,101579287,101583216,101598153,101692585,101706756,101714438,101715563	101452931,101454100,101567845,101575546,101579427,101583356,101598299,101692701,101706902,101714551,101716444	Gene ID= ENSG00000198542.13 TPM= 8.5 Transcript Type= protein_coding
chr13	102342798	102348018	102342798	102348018	+	transcript1657.chr13.nnic@NA	transcript1657.chr13.nnic	NA	102342798	102348018	Gene ID= novel_gene_chr13_1658 TPM= 2.12 Transcript Type= NA
chr13	102394630	102395703	102394630	102395703	+	ENST00000606448.1@FGF14-AS2	ENST00000606448.1	lincRNA	102394630	102395703	Gene ID= ENSG00000272143.1 TPM= 4.25 Transcript Type= lincRNA
chr13	102596924	102676391	102596924	102676391	+	transcript1668.chr13.nic@TPP2	transcript1668.chr13.nic	protein_coding	102596924,102604793,102614101,102616396,102618722,102622877,102627012,102627848,102629482,102630096,102633950,102635587,102636224,102637082,102638239,102640270,102643222,102644557,102644909,102646294,102647207,102648907,102649408,102657056,102663648,102664795,102674283,102676296	102597203,102604921,102614196,102616500,102618846,102623040,102627166,102627924,102629609,102630195,102634098,102635702,102636392,102637239,102638315,102640376,102643376,102644673,102645009,102646390,102647344,102649151,102649486,102657207,102663744,102664925,102674490,102676391	Gene ID= ENSG00000134900.11 TPM= 3.19 Transcript Type= NA
chr13	102596924	102657123	102596924	102657123	+	transcript1670.chr13.nic@TPP2	transcript1670.chr13.nic	protein_coding	102596924,102604793,102614101,102616396,102618722,102622877,102627012,102627848,102629482,102630096,102633950,102635587,102636224,102637082,102638239,102640270,102643222,102644557,102644909,102646294,102647207,102648907,102649408,102651359,102657056	102597203,102604921,102614196,102616500,102618846,102623040,102627166,102627924,102629609,102630195,102634098,102635702,102636392,102637239,102638315,102640376,102643376,102644673,102645009,102646390,102647344,102649151,102649486,102651397,102657123	Gene ID= ENSG00000134900.11 TPM= 2.12 Transcript Type= NA
chr13	102597003	102678461	102597003	102678461	+	ENST00000376065.8@TPP2	ENST00000376065.8	protein_coding	102597003,102604793,102614101,102616396,102618722,102622877,102627012,102627848,102629482,102630096,102633950,102635587,102636224,102637082,102638239,102640270,102643222,102644557,102644909,102646294,102647207,102648907,102649408,102657056,102663648,102664795,102674283,102676296,102678227	102597203,102604921,102614196,102616500,102618846,102623040,102627166,102627924,102629609,102630195,102634098,102635702,102636392,102637239,102638315,102640376,102643376,102644673,102645009,102646390,102647344,102649151,102649486,102657207,102663744,102664925,102674490,102676415,102678461	Gene ID= ENSG00000134900.11 TPM= 4.25 Transcript Type= protein_coding
chr13	102597033	102608022	102597033	102608022	+	ENST00000490010.1@TPP2	ENST00000490010.1	protein_coding	102597033,102604793,102607632	102597203,102604921,102608022	Gene ID= ENSG00000134900.11 TPM= 1.06 Transcript Type= processed_transcript
chr13	102729369	102759070	102729369	102759070	-	ENST00000322527.3@CCDC168	ENST00000322527.3	protein_coding	102758702,102758543,102758410,102729369	102759070,102758576,102758452,102750388	Gene ID= ENSG00000175820.3 TPM= 1.06 Transcript Type= protein_coding
chr13	102766110	102773811	102766110	102773811	-	ENST00000376032.8@TEX30	ENST00000376032.8	protein_coding	102773682,102770012,102769311,102768260,102767273,102766110	102773811,102770086,102769541,102768311,102767478,102766580	Gene ID= ENSG00000151287.16 TPM= 9.56 Transcript Type= protein_coding
chr13	102766110	102773759	102766110	102773759	-	ENST00000376021.8@TEX30	ENST00000376021.8	protein_coding	102773682,102769311,102768260,102767273,102766110	102773759,102769541,102768311,102767478,102766580	Gene ID= ENSG00000151287.16 TPM= 1.06 Transcript Type= protein_coding
chr13	102784281	102799007	102784281	102799007	-	ENST00000376004.4@KDELC1	ENST00000376004.4	protein_coding	102798489,102796804,102793601,102793341,102791258,102790901,102789012,102787834,102786232,102784281	102799007,102797009,102793806,102793418,102791430,102791138,102789221,102787923,102786339,102784512	Gene ID= ENSG00000134901.12 TPM= 3.19 Transcript Type= protein_coding
chr13	102799049	102841533	102799049	102841533	+	ENST00000257336.5@BIVM	ENST00000257336.5	protein_coding	102799049,102805307,102807146,102816428,102821037,102821743,102822065,102831565,102834466,102838643,102839572	102799521,102805390,102807745,102816554,102821132,102821847,102822159,102831697,102834552,102838739,102841533	Gene ID= ENSG00000134897.13 TPM= 5.23 Transcript Type= protein_coding
chr13	102800352	102841535	102800352	102841535	+	transcript1692.chr13.nic@BIVM	transcript1692.chr13.nic	protein_coding	102800352,102805307,102807146,102816428,102821037,102821743,102822065,102831565,102834466,102838643,102839551	102800735,102805390,102807745,102816554,102821132,102821847,102822159,102831697,102834552,102838739,102841535	Gene ID= ENSG00000134897.13 TPM= 3.9 Transcript Type= NA
chr13	102844844	102876001	102844844	102876001	+	ENST00000355739.8@ERCC5	ENST00000355739.8	protein_coding	102844844,102852118,102853757,102854288,102856052,102858275,102861507,102862030,102865667,102866262,102866632,102868113,102872198,102873259,102875307	102846354,102852293,102853872,102854374,102856112,102858418,102861714,102863103,102865911,102866381,102866845,102868257,102872398,102873343,102876001	Gene ID= ENSG00000134899.18 TPM= 35.05 Transcript Type= protein_coding
chr13	102880356	102892537	102880356	102892537	+	transcript1718.chr13.nnic@METTL21EP	transcript1718.chr13.nnic	transcribed_unprocessed_pseudogene	102880356,102881088,102891336	102880488,102881167,102892537	Gene ID= ENSG00000250878.3 TPM= 5.31 Transcript Type= NA
chr13	106489731	106535114	106489731	106535114	-	ENST00000245323.4@EFNB2	ENST00000245323.4	protein_coding	106534843,106512529,106495748,106494881,106489731	106535114,106512812,106495840,106494994,106493428	Gene ID= ENSG00000125266.6 TPM= 6.37 Transcript Type= protein_coding
chr13	106543327	106568185	106543327	106568185	-	transcript1724.chr13.nic@ARGLU1	transcript1724.chr13.nic	protein_coding	106567573,106559432,106557559,106557048,106543327	106568185,106559657,106557616,106557131,106544160	Gene ID= ENSG00000134884.13 TPM= 6.37 Transcript Type= NA
chr13	106543327	106568185	106543327	106568185	-	transcript1727.chr13.nic@ARGLU1	transcript1727.chr13.nic	protein_coding	106567573,106557048,106543327	106568185,106559657,106544160	Gene ID= ENSG00000134884.13 TPM= 40.89 Transcript Type= NA
chr13	106541673	106568164	106541673	106568164	-	ENST00000400198.7@ARGLU1	ENST00000400198.7	protein_coding	106567573,106559432,106557048,106541673	106568164,106559657,106557131,106544160	Gene ID= ENSG00000134884.13 TPM= 7.44 Transcript Type= protein_coding
chr13	107711529	107714637	107711529	107714637	+	transcript1735.chr13.nnic@NA	transcript1735.chr13.nnic	NA	107711529	107714637	Gene ID= novel_gene_chr13_1736 TPM= 2.12 Transcript Type= NA
chr13	108207439	108218368	108207439	108218368	-	ENST00000405925.2@LIG4	ENST00000405925.2	protein_coding	108218162,108207439	108218368,108211296	Gene ID= ENSG00000174405.13 TPM= 8.5 Transcript Type= protein_coding
chr13	108207439	108215534	108207439	108215534	-	ENST00000442234.5@LIG4	ENST00000442234.5	protein_coding	108215484,108214538,108207439	108215534,108214610,108211296	Gene ID= ENSG00000174405.13 TPM= 6.37 Transcript Type= protein_coding
chr13	108218379	108234255	108218379	108234255	+	ENST00000375898.3@ABHD13	ENST00000375898.3	protein_coding	108218379,108229199	108218659,108234255	Gene ID= ENSG00000139826.5 TPM= 4.25 Transcript Type= protein_coding
chr13	108221844	108228618	108221844	108228618	-	transcript1748.chr13.nnic@NA	transcript1748.chr13.nnic	NA	108221844	108228618	Gene ID= novel_gene_chr13_1749 TPM= 3.19 Transcript Type= NA
chr13	108269629	108308484	108269629	108308484	+	ENST00000430559.5@TNFSF13B	ENST00000430559.5	protein_coding	108269629,108270340,108303253,108303454,108306826	108270234,108270424,108303365,108303604,108308484	Gene ID= ENSG00000102524.11 TPM= 1.06 Transcript Type= protein_coding
chr13	108270226	108307033	108270226	108307033	+	transcript1751.chr13.nic@TNFSF13B	transcript1751.chr13.nic	protein_coding	108270226,108286803,108303253,108303454,108306826	108270424,108286859,108303365,108303604,108307033	Gene ID= ENSG00000102524.11 TPM= 2.12 Transcript Type= NA
chr13	109141047	109208007	109141047	109208007	+	transcript1755.chr13.nic@MYO16	transcript1755.chr13.nic	protein_coding	109141047,109164901,109179542,109206609	109141376,109165059,109179633,109208007	Gene ID= ENSG00000041515.15 TPM= 4.25 Transcript Type= NA
chr13	109139557	109141010	109139557	109141010	-	transcript1756.chr13.nnic@NA	transcript1756.chr13.nnic	NA	109139557	109141010	Gene ID= novel_gene_chr13_1757 TPM= 5.31 Transcript Type= NA
chr13	109752698	109786568	109752698	109786568	-	ENST00000375856.4@IRS2	ENST00000375856.4	protein_coding	109782042,109752698	109786568,109756308	Gene ID= ENSG00000185950.8 TPM= 12.75 Transcript Type= protein_coding
chr13	109786849	109788210	109786849	109788210	+	transcript1763.chr13.nnic@NA	transcript1763.chr13.nnic	NA	109786849	109788210	Gene ID= novel_gene_chr13_1764 TPM= 7.44 Transcript Type= NA
chr13	110131925	110138878	110131925	110138878	-	transcript1767.chr13.nnic@NA	transcript1767.chr13.nnic	NA	110138136,110133090,110131925	110138878,110133200,110132590	Gene ID= novel_gene_chr13_1768 TPM= 2.12 Transcript Type= NA
chr13	110148963	110307149	110148963	110307149	-	ENST00000375820.8@COL4A1	ENST00000375820.8	protein_coding	110306944,110242675,110213926,110213782,110212574,110212417,110211869,110211647,110210129,110209980,110209392,110208849,110207403,110206865,110206665,110205494,110205353,110203566,110201438,110200854,110198467,110195023,110192830,110192214,110187138,110186385,110183184,110182993,110181292,110179271,110178923,110178064,110177842,110176885,110176626,110176424,110175218,110174623,110174446,110173900,110172720,110170547,110169629,110167158,110166232,110164862,110163463,110162230,110161192,110155283,110152334,110148963	110307149,110242734,110214015,110213826,110212618,110212479,110211922,110211673,110210212,110210042,110209427,110208890,110207489,110206891,110206715,110205538,110205406,110203607,110201522,110200889,110198631,110195118,110192913,110192284,110187329,110186553,110183276,110183097,110181389,110179421,110179036,110178231,110177931,110177037,110176724,110176513,110175357,110174749,110174526,110173998,110172770,110170732,110169762,110167230,110166303,110164990,110163561,110162442,110161369,110155397,110152506,110150444	Gene ID= ENSG00000187498.14 TPM= 49.92 Transcript Type= protein_coding
chr13	110307268	110484959	110307268	110484959	+	transcript1780.chr13.nic@COL4A2	transcript1780.chr13.nic	protein_coding	110307268,110307860,110308069,110357472,110424734,110424953,110428467,110429885,110430401,110430545,110432325,110434401,110436269,110438002,110438618,110439789,110445829,110446798,110449679,110450305,110457343,110458771,110462114,110462278,110465405,110466003,110467040,110469217,110472929,110478003,110480220,110482516,110484905	110307528,110307947,110308123,110357552,110424868,110424997,110428583,110429956,110430436,110430607,110432360,110434442,110436367,110438037,110438668,110439833,110445882,110446864,110449789,110450454,110457435,110458934,110462186,110462384,110465606,110466062,110467096,110469324,110473150,110478164,110480390,110482659,110484959	Gene ID= ENSG00000134871.17 TPM= 6.37 Transcript Type= NA
chr13	110307284	110447006	110307284	110447006	+	transcript1791.chr13.nic@COL4A2	transcript1791.chr13.nic	protein_coding	110307284,110307860,110308069,110357472,110424734,110424953,110428467,110429885,110430401,110430545,110432325,110434401,110436269,110438002,110438618,110439789,110445829,110446798	110307528,110307947,110308123,110357552,110424868,110424997,110428583,110429956,110430436,110430607,110432360,110434442,110436367,110438037,110438668,110439833,110445882,110447006	Gene ID= ENSG00000134871.17 TPM= 4.25 Transcript Type= NA
chr13	110307267	110513027	110307267	110513027	+	ENST00000360467.5@COL4A2	ENST00000360467.5	protein_coding	110307267,110307860,110308069,110357472,110424734,110424953,110428467,110429885,110430401,110430545,110432325,110434401,110436269,110438002,110438618,110439789,110445829,110446798,110449679,110450305,110457343,110458771,110462114,110462278,110465405,110466003,110467040,110469217,110472929,110478003,110480220,110482516,110484905,110485655,110489445,110489711,110491233,110492070,110493211,110495342,110501668,110503121,110503383,110503847,110504148,110506415,110507935,110511934	110307528,110307947,110308123,110357552,110424868,110424997,110428583,110429956,110430436,110430607,110432360,110434442,110436367,110438037,110438668,110439833,110445882,110446864,110449789,110450454,110457435,110458934,110462186,110462384,110465606,110466062,110467096,110469324,110473150,110478164,110480390,110482659,110485027,110485836,110489508,110489785,110491340,110492177,110493282,110495467,110501784,110503282,110503481,110503993,110504264,110506606,110508221,110513027	Gene ID= ENSG00000134871.17 TPM= 228.36 Transcript Type= protein_coding
chr13	110363003	110367247	110363003	110367247	+	transcript1799.chr13.nnic@NA	transcript1799.chr13.nnic	NA	110363003	110367247	Gene ID= novel_gene_chr13_1800 TPM= 2.12 Transcript Type= NA
chr13	110469908	110472222	110469908	110472222	-	transcript1801.chr13.nnic@NA	transcript1801.chr13.nnic	NA	110469908	110472222	Gene ID= novel_gene_chr13_1802 TPM= 16.99 Transcript Type= NA
chr13	110523066	110561733	110523066	110561733	-	ENST00000267328.4@RAB20	ENST00000267328.4	protein_coding	110561348,110523066	110561733,110524197	Gene ID= ENSG00000139832.4 TPM= 32.93 Transcript Type= protein_coding
chr13	110615533	110639993	110615533	110639993	+	transcript1806.chr13.nic@NAXD	transcript1806.chr13.nic	protein_coding	110615533,110622216,110624234,110625190,110627439,110634545,110634672,110635468,110637129,110638242	110615647,110622366,110624279,110625278,110627547,110634595,110634776,110635588,110637249,110639993	Gene ID= ENSG00000213995.11 TPM= 5.77 Transcript Type= NA
chr13	110615533	110639993	110615533	110639993	+	transcript1807.chr13.nic@NAXD	transcript1807.chr13.nic	protein_coding	110615533,110622216,110624234,110625190,110627439,110634545,110634672,110635468,110637129,110638378	110615647,110622366,110624279,110625278,110627547,110634595,110634776,110635588,110637249,110639993	Gene ID= ENSG00000213995.11 TPM= 38.34 Transcript Type= NA
chr13	110615601	110639993	110615601	110639993	+	transcript1810.chr13.nic@NAXD	transcript1810.chr13.nic	protein_coding	110615601,110622216,110624234,110625190,110627439,110634545,110634672,110635468,110637129,110638378	110615774,110622366,110624279,110625278,110627547,110634595,110634776,110635588,110637249,110639993	Gene ID= ENSG00000213995.11 TPM= 11.79 Transcript Type= NA
chr13	110615533	110639996	110615533	110639996	+	transcript1812.chr13.nnic@NAXD	transcript1812.chr13.nnic	protein_coding	110615533,110622216,110624234,110625190,110627439,110634545,110634672,110635468,110638378	110615647,110622366,110624279,110625278,110627547,110634595,110634776,110635588,110639996	Gene ID= ENSG00000213995.11 TPM= 4.71 Transcript Type= NA
chr13	110615585	110639993	110615585	110639993	+	transcript1813.chr13.nic@NAXD	transcript1813.chr13.nic	protein_coding	110615585,110622216,110624234,110625190,110627439,110634545,110634672,110637129,110638378	110615647,110622366,110624279,110625278,110627547,110634595,110635588,110637249,110639993	Gene ID= ENSG00000213995.11 TPM= 6.83 Transcript Type= NA
chr13	110615533	110639991	110615533	110639991	+	transcript1817.chr13.nic@NAXD	transcript1817.chr13.nic	protein_coding	110615533,110622216,110624234,110625190,110627439,110634545,110637129	110615647,110622366,110624279,110625278,110627547,110635588,110639991	Gene ID= ENSG00000213995.11 TPM= 5.31 Transcript Type= NA
chr13	110615661	110639993	110615661	110639993	+	ENST00000309957.2@NAXD	ENST00000309957.2	protein_coding	110615661,110622216,110624234,110625190,110627439,110634545,110634672,110635468,110637129,110638242	110615774,110622366,110624279,110625278,110627547,110634595,110634776,110635588,110637249,110639993	Gene ID= ENSG00000213995.11 TPM= 4.71 Transcript Type= protein_coding
chr13	110615591	110639993	110615591	110639993	+	ENST00000470164.2@NAXD	ENST00000470164.2	protein_coding	110615591,110622216,110624234,110627439,110634545,110634672,110635468,110637129,110638378	110615647,110622366,110624279,110627547,110634595,110634776,110635588,110637249,110639993	Gene ID= ENSG00000213995.11 TPM= 6.48 Transcript Type= processed_transcript
chr13	110661947	110706179	110661947	110706179	-	transcript1830.chr13.nnic@CARS2	transcript1830.chr13.nnic	protein_coding	110705870,110705521,110701438,110687947,110687721,110683051,110676974,110667340,110663451,110662233,110661947	110706179,110705571,110701555,110688018,110687826,110683134,110677103,110667473,110663518,110663050,110662194	Gene ID= ENSG00000134905.16 TPM= 3.19 Transcript Type= NA
chr13	110650386	110706116	110650386	110706116	-	transcript1831.chr13.nic@CARS2	transcript1831.chr13.nic	protein_coding	110705870,110705521,110701438,110687947,110687721,110683051,110676974,110667340,110663451,110650386	110706116,110705571,110701555,110688018,110687826,110683134,110677103,110667473,110663518,110651100	Gene ID= ENSG00000134905.16 TPM= 2.12 Transcript Type= NA
chr13	110663452	110706124	110663452	110706124	-	transcript1835.chr13.nnic@CARS2	transcript1835.chr13.nnic	protein_coding	110705870,110705521,110701438,110687947,110687721,110683051,110676974,110667340,110663452	110706124,110705571,110701555,110688018,110687826,110683134,110677103,110667473,110664046	Gene ID= ENSG00000134905.16 TPM= 2.12 Transcript Type= NA
chr13	110641417	110706157	110641417	110706157	-	ENST00000257347.8@CARS2	ENST00000257347.8	protein_coding	110705870,110705521,110701438,110687947,110687721,110683051,110676974,110667340,110663451,110651034,110647101,110645967,110644385,110642315,110641417	110706157,110705571,110701555,110688018,110687826,110683134,110677103,110667473,110663518,110651100,110647239,110646090,110644483,110642521,110641608	Gene ID= ENSG00000134905.16 TPM= 76.48 Transcript Type= protein_coding
chr13	110711228	110712936	110711228	110712936	-	transcript1846.chr13.nnic@NA	transcript1846.chr13.nnic	NA	110711228	110712936	Gene ID= novel_gene_chr13_1847 TPM= 2.12 Transcript Type= NA
chr13	110715000	110721074	110715000	110721074	+	transcript1844.chr13.nnic@ING1	transcript1844.chr13.nnic	protein_coding	110715000,110719229	110715176,110721074	Gene ID= ENSG00000153487.12 TPM= 2.12 Transcript Type= NA
chr13	110714982	110721071	110714982	110721071	+	ENST00000375774.3@ING1	ENST00000375774.3	protein_coding	110714982,110719229	110716008,110721071	Gene ID= ENSG00000153487.12 TPM= 2.12 Transcript Type= protein_coding
chr13	110878539	110882331	110878539	110882331	-	transcript1869.chr13.nnic@NA	transcript1869.chr13.nnic	NA	110878539	110882331	Gene ID= novel_gene_chr13_1870 TPM= 5.31 Transcript Type= NA
chr13	110892699	110915067	110892699	110915067	-	transcript1861.chr13.nic@ANKRD10	transcript1861.chr13.nic	protein_coding	110914725,110910618,110906033,110892699	110915067,110910770,110906124,110893263	Gene ID= ENSG00000088448.14 TPM= 4.25 Transcript Type= NA
chr13	110879788	110894427	110879788	110894427	-	transcript1866.chr13.nic@ANKRD10	transcript1866.chr13.nic	protein_coding	110893028,110883698,110879788	110894427,110883793,110880112	Gene ID= ENSG00000088448.14 TPM= 7.44 Transcript Type= NA
chr13	110905157	110915101	110905157	110915101	-	transcript1867.chr13.nic@ANKRD10	transcript1867.chr13.nic	protein_coding	110914725,110910618,110905157	110915101,110910770,110906124	Gene ID= ENSG00000088448.14 TPM= 2.12 Transcript Type= NA
chr13	110878540	110915069	110878540	110915069	-	ENST00000267339.6@ANKRD10	ENST00000267339.6	protein_coding	110914725,110910618,110906033,110893028,110883698,110878540	110915069,110910770,110906124,110893263,110883793,110880112	Gene ID= ENSG00000088448.14 TPM= 24.43 Transcript Type= protein_coding
chr13	111153653	111281109	111153653	111281109	+	transcript1872.chr13.nic@ARHGEF7	transcript1872.chr13.nic	protein_coding	111153653,111153905,111205289,111209872,111217679,111233205,111243872,111244199,111267548,111273814,111274731,111275532,111277587,111280272,111280538	111153721,111153991,111205373,111210002,111217880,111233293,111243966,111244294,111267670,111273952,111274790,111275678,111277673,111280350,111281109	Gene ID= ENSG00000102606.17 TPM= 4.25 Transcript Type= NA
chr13	111281182	111305731	111281182	111305731	+	transcript1876.chr13.nic@ARHGEF7	transcript1876.chr13.nic	protein_coding	111281182,111286147,111288354,111300748,111301478,111302991	111283363,111286240,111288443,111300847,111301532,111305731	Gene ID= ENSG00000102606.17 TPM= 66.39 Transcript Type= NA
chr13	111299338	111305731	111299338	111305731	+	transcript1878.chr13.nic@ARHGEF7	transcript1878.chr13.nic	protein_coding	111299338,111301478,111302991	111300847,111301532,111305731	Gene ID= ENSG00000102606.17 TPM= 7.97 Transcript Type= NA
chr13	111153653	111156102	111153653	111156102	+	transcript1879.chr13.nic@ARHGEF7	transcript1879.chr13.nic	protein_coding	111153653,111153905	111153721,111156102	Gene ID= ENSG00000102606.17 TPM= 5.31 Transcript Type= NA
chr13	112485005	112588183	112485005	112588183	-	transcript1887.chr13.nnic@TUBGCP3	transcript1887.chr13.nnic	protein_coding	112587905,112569152,112565111,112559322,112558196,112556052,112554887,112554057,112548108,112527374,112526942,112522320,112519886,112518975,112516440,112504626,112504032,112499045,112489581,112485005	112588183,112569259,112565178,112559399,112558413,112556224,112555005,112554182,112548176,112527484,112527050,112522509,112520021,112519043,112516575,112504714,112504163,112499185,112489697,112486151	Gene ID= ENSG00000126216.13 TPM= 2.12 Transcript Type= NA
chr13	112485005	112588167	112485005	112588167	-	ENST00000261965.7@TUBGCP3	ENST00000261965.7	protein_coding	112587905,112569152,112565111,112559322,112558196,112556052,112554887,112554057,112548108,112547620,112545699,112527374,112526942,112522320,112519886,112518975,112516440,112504626,112504032,112499045,112489581,112485005	112588167,112569259,112565178,112559399,112558413,112556224,112555005,112554182,112548176,112547752,112545865,112527484,112527050,112522509,112520021,112519043,112516575,112504714,112504163,112499185,112489697,112486151	Gene ID= ENSG00000126216.13 TPM= 25.49 Transcript Type= protein_coding
chr13	112498807	112588125	112498807	112588125	-	ENST00000375669.7@TUBGCP3	ENST00000375669.7	protein_coding	112587905,112569152,112565111,112559322,112558196,112556052,112554887,112554057,112548108,112547620,112545699,112527374,112526942,112522320,112519886,112518975,112516440,112504626,112504032,112499045,112498807	112588125,112569259,112565178,112559399,112558413,112556224,112555005,112554182,112548176,112547752,112545865,112527484,112527050,112522509,112520021,112519043,112516575,112504714,112504163,112499185,112498936	Gene ID= ENSG00000126216.13 TPM= 3.19 Transcript Type= protein_coding
chr13	112546482	112588135	112546482	112588135	-	ENST00000464139.5@TUBGCP3	ENST00000464139.5	protein_coding	112587905,112569152,112565111,112559322,112558196,112556052,112554887,112554057,112548108,112546482	112588135,112569259,112565178,112559399,112558413,112556224,112555005,112554182,112548176,112547752	Gene ID= ENSG00000126216.13 TPM= 2.12 Transcript Type= protein_coding
chr13	112602828	112606417	112602828	112606417	-	ENST00000613809.1@AL139384.2	ENST00000613809.1	lincRNA	112602828	112606417	Gene ID= ENSG00000277159.1 TPM= 1.06 Transcript Type= lincRNA
chr13	112686769	112689815	112686769	112689815	-	ENST00000612143.1@AL139384.1	ENST00000612143.1	lincRNA	112686769	112689815	Gene ID= ENSG00000274922.1 TPM= 1.06 Transcript Type= lincRNA
chr13	112882751	112887159	112882751	112887159	+	transcript1895.chr13.nnic@ATP11A	transcript1895.chr13.nnic	protein_coding	112882751,112884841	112884780,112887159	Gene ID= ENSG00000068650.18 TPM= 9.56 Transcript Type= NA
chr13	112724967	112727558	112724967	112727558	+	transcript1899.chr13.nnic@NA	transcript1899.chr13.nnic	NA	112724967	112727558	Gene ID= novel_gene_chr13_1900 TPM= 2.12 Transcript Type= NA
chr13	112856307	112859554	112856307	112859554	-	transcript1903.chr13.nnic@NA	transcript1903.chr13.nnic	NA	112856307	112859554	Gene ID= novel_gene_chr13_1904 TPM= 2.12 Transcript Type= NA
chr13	113093363	113097662	113093363	113097662	+	transcript1910.chr13.nnic@NA	transcript1910.chr13.nnic	NA	113093363	113097662	Gene ID= novel_gene_chr13_1911 TPM= 3.19 Transcript Type= NA
chr13	113095999	113098440	113095999	113098440	+	transcript1908.chr13.nnic@NA	transcript1908.chr13.nnic	NA	113095999	113098440	Gene ID= novel_gene_chr13_1909 TPM= 2.12 Transcript Type= NA
chr13	113122818	113149529	113122818	113149529	+	ENST00000375559.7@F10	ENST00000375559.7	protein_coding	113122818,113129452,113138457,113139357,113140919,113143851,113147379,113148916	113122925,113129612,113138481,113139470,113141050,113144095,113147496,113149529	Gene ID= ENSG00000126218.11 TPM= 46.74 Transcript Type= protein_coding
chr13	113148722	113153999	113148722	113153999	-	transcript1915.chr13.nnic@AL137002.2	transcript1915.chr13.nnic	antisense_RNA	113153144,113148722	113153999,113150963	Gene ID= ENSG00000283828.1 TPM= 7.97 Transcript Type= NA
chr13	113148722	113153640	113148722	113153640	-	transcript1916.chr13.nnic@AL137002.2	transcript1916.chr13.nnic	antisense_RNA	113153144,113148722	113153640,113151504	Gene ID= ENSG00000283828.1 TPM= 2.66 Transcript Type= NA
chr13	113177617	113208650	113177617	113208650	-	ENST00000375457.2@PCID2	ENST00000375457.2	protein_coding	113208024,113200427,113198191,113197178,113196181,113195071,113190872,113185485,113184346,113181130,113180158,113179917,113178966,113177617	113208650,113200516,113198264,113197243,113196222,113195125,113190975,113185560,113184487,113181230,113180231,113180042,113179089,113178287	Gene ID= ENSG00000126226.21 TPM= 3.19 Transcript Type= protein_coding
chr13	113177577	113208711	113177577	113208711	-	ENST00000337344.8@PCID2	ENST00000337344.8	protein_coding	113208599,113200427,113198191,113197178,113196181,113195071,113190872,113185485,113184346,113181130,113180158,113179917,113178966,113177577	113208711,113200516,113198264,113197243,113196222,113195125,113190975,113185560,113184487,113181230,113180231,113180042,113179089,113178287	Gene ID= ENSG00000126226.21 TPM= 54.38 Transcript Type= protein_coding
chr13	113177611	113208666	113177611	113208666	-	ENST00000375477.5@PCID2	ENST00000375477.5	protein_coding	113208599,113200427,113198191,113197178,113196181,113195071,113190872,113185485,113184346,113181130,113180158,113179917,113178966,113178174,113177611	113208666,113200516,113198264,113197243,113196222,113195125,113190975,113185560,113184487,113181230,113180231,113180042,113179089,113178287,113178008	Gene ID= ENSG00000126226.21 TPM= 19.33 Transcript Type= protein_coding
chr13	113177611	113208715	113177611	113208715	-	ENST00000375479.6@PCID2	ENST00000375479.6	protein_coding	113208599,113200427,113198191,113197178,113196181,113195071,113190872,113185485,113184346,113181130,113180158,113179917,113178966,113178174,113177611	113208715,113200516,113198264,113197243,113196222,113195125,113190975,113185560,113184487,113181230,113180231,113180042,113179089,113178287,113177976	Gene ID= ENSG00000126226.21 TPM= 16.14 Transcript Type= protein_coding
chr13	113208193	113265072	113208193	113265072	+	ENST00000375441.7@CUL4A	ENST00000375441.7	protein_coding	113208193,113209973,113218945,113227976,113229446,113233177,113233897,113235063,113236823,113239433,113242968,113244410,113244949,113245152,113245956,113253082,113254693,113254953,113260607,113263487	113208607,113210088,113219048,113228045,113229519,113233339,113233986,113235145,113236890,113239551,113243160,113244514,113245059,113245237,113246063,113253195,113254798,113255125,113260759,113265072	Gene ID= ENSG00000139842.14 TPM= 14.34 Transcript Type= protein_coding
chr13	113208694	113265072	113208694	113265072	+	ENST00000326335.8@CUL4A	ENST00000326335.8	protein_coding	113208694,113209973,113218945,113227976,113229446,113233153,113233897,113235063,113236823,113239433,113242968,113244410,113244949,113245152,113245956,113253082,113254693,113254953,113260607,113263487	113208752,113210088,113219048,113228045,113229519,113233339,113233986,113235145,113236890,113239551,113243160,113244514,113245059,113245237,113246063,113253195,113254798,113255125,113260759,113265072	Gene ID= ENSG00000139842.14 TPM= 5.84 Transcript Type= protein_coding
chr13	113209600	113230212	113209600	113230212	+	ENST00000488558.2@CUL4A	ENST00000488558.2	protein_coding	113209600,113209973,113218945,113227976,113229446,113229642	113209775,113210088,113219048,113228045,113229519,113230212	Gene ID= ENSG00000139842.14 TPM= 2.12 Transcript Type= protein_coding
chr13	113251248	113252535	113251248	113252535	+	transcript1964.chr13.nnic@NA	transcript1964.chr13.nnic	NA	113251248	113252535	Gene ID= novel_gene_chr13_1965 TPM= 2.12 Transcript Type= NA
chr13	113297223	113321402	113297223	113321402	+	transcript1974.chr13.nic@LAMP1	transcript1974.chr13.nic	protein_coding	113297223,113306485,113309643,113310709,113319469,113320345	113297495,113306606,113309862,113310867,113319656,113321402	Gene ID= ENSG00000185896.10 TPM= 3.19 Transcript Type= NA
chr13	113297241	113323672	113297241	113323672	+	ENST00000332556.4@LAMP1	ENST00000332556.4	protein_coding	113297241,113306485,113309643,113310709,113319469,113320345,113321404,113321557,113322282	113297495,113306606,113309862,113310867,113319656,113320470,113321470,113321727,113323672	Gene ID= ENSG00000185896.10 TPM= 15.93 Transcript Type= protein_coding
chr13	113324190	113364126	113324190	113364126	-	ENST00000375431.8@GRTP1	ENST00000375431.8	protein_coding	113364020,113363762,113355323,113350849,113344863,113325919,113325661,113324190	113364126,113363910,113355481,113350973,113344959,113326091,113325846,113324577	Gene ID= ENSG00000139835.13 TPM= 2.12 Transcript Type= protein_coding
chr13	113421945	113453546	113421945	113453546	-	transcript1987.chr13.nnic@ADPRHL1	transcript1987.chr13.nnic	protein_coding	113453224,113444425,113433742,113428952,113425052,113424217,113422826,113421945	113453546,113444589,113433867,113429092,113425179,113424349,113422979,113422671	Gene ID= ENSG00000153531.13 TPM= 38.54 Transcript Type= NA
chr13	113421940	113453548	113421940	113453548	-	transcript1994.chr13.nnic@ADPRHL1	transcript1994.chr13.nnic	protein_coding	113453224,113444425,113433742,113425052,113424217,113421940	113453548,113444589,113433867,113425179,113424349,113422979	Gene ID= ENSG00000153531.13 TPM= 31.31 Transcript Type= NA
chr13	113399610	113453524	113399610	113453524	-	ENST00000612156.2@ADPRHL1	ENST00000612156.2	protein_coding	113453224,113444425,113433742,113428952,113425052,113424217,113422826,113399610	113453524,113444589,113433867,113429092,113425179,113424349,113422979,113408220	Gene ID= ENSG00000153531.13 TPM= 48.26 Transcript Type= protein_coding
chr13	113422633	113453524	113422633	113453524	-	ENST00000375418.7@ADPRHL1	ENST00000375418.7	protein_coding	113453224,113444425,113433742,113428952,113425052,113424217,113422633	113453524,113444589,113433867,113429092,113425179,113424349,113422979	Gene ID= ENSG00000153531.13 TPM= 14.28 Transcript Type= protein_coding
chr13	113407466	113409906	113407466	113409906	+	transcript2006.chr13.nnic@NA	transcript2006.chr13.nnic	NA	113407466	113409906	Gene ID= novel_gene_chr13_2007 TPM= 14.87 Transcript Type= NA
chr13	113425247	113428257	113425247	113428257	+	transcript2004.chr13.nnic@NA	transcript2004.chr13.nnic	NA	113425247	113428257	Gene ID= novel_gene_chr13_2005 TPM= 6.37 Transcript Type= NA
chr13	113450452	113453478	113450452	113453478	-	transcript2012.chr13.nnic@NA	transcript2012.chr13.nnic	NA	113450452	113453478	Gene ID= novel_gene_chr13_2013 TPM= 6.37 Transcript Type= NA
chr13	113455287	113455548	113455287	113455548	-	transcript2079.chr13.nnic@NA	transcript2079.chr13.nnic	NA	113455287	113455548	Gene ID= novel_gene_chr13_2080 TPM= 2.12 Transcript Type= NA
chr13	113455819	113485620	113455819	113485620	-	transcript2058.chr13.nnic@DCUN1D2	transcript2058.chr13.nnic	protein_coding	113485504,113483840,113480575,113474124,113461054,113459312,113455819	113485620,113484056,113480743,113474254,113461136,113459408,113458108	Gene ID= ENSG00000150401.14 TPM= 10.89 Transcript Type= NA
chr13	113455819	113490673	113455819	113490673	-	transcript2060.chr13.nic@DCUN1D2	transcript2060.chr13.nic	protein_coding	113490433,113483840,113480575,113474124,113461054,113459312,113455819	113490673,113484056,113480743,113474254,113461136,113459408,113458108	Gene ID= ENSG00000150401.14 TPM= 16.2 Transcript Type= NA
chr13	113455819	113490673	113455819	113490673	-	transcript2065.chr13.nnic@DCUN1D2	transcript2065.chr13.nnic	protein_coding	113490433,113483840,113480575,113474124,113461054,113459312,113455819	113490673,113484196,113480743,113474254,113461136,113459408,113458108	Gene ID= ENSG00000150401.14 TPM= 16.2 Transcript Type= NA
chr13	113455819	113490711	113455819	113490711	-	transcript2066.chr13.nnic@DCUN1D2	transcript2066.chr13.nnic	protein_coding	113490667,113483840,113480575,113474124,113461054,113459312,113455819	113490711,113484196,113480743,113474254,113461136,113459408,113458108	Gene ID= ENSG00000150401.14 TPM= 20.45 Transcript Type= NA
chr13	113491043	113550195	113491043	113550195	+	transcript2024.chr13.nnic@TMCO3	transcript2024.chr13.nnic	protein_coding	113491043,113495502,113498342,113499958,113501752,113503496,113510238,113520616,113534045,113539357,113548303,113549425	113491273,113496025,113498521,113500149,113501880,113503588,113510424,113520733,113534240,113539507,113548452,113550195	Gene ID= ENSG00000150403.17 TPM= 6.46 Transcript Type= NA
chr13	113491031	113550195	113491031	113550195	+	transcript2025.chr13.nic@TMCO3	transcript2025.chr13.nic	protein_coding	113491031,113495502,113498342,113499958,113501752,113503496,113510238,113520616,113539357,113547300,113548303,113549425	113491273,113496025,113498521,113500149,113501880,113503588,113510424,113520733,113539507,113547379,113548452,113550195	Gene ID= ENSG00000150403.17 TPM= 9.64 Transcript Type= NA
chr13	113491029	113550195	113491029	113550195	+	transcript2026.chr13.nic@TMCO3	transcript2026.chr13.nic	protein_coding	113491029,113495502,113498342,113499958,113501752,113510238,113520616,113534045,113539357,113547300,113548303,113549425	113491273,113496025,113498521,113500149,113501880,113510424,113520733,113534240,113539507,113547379,113548452,113550195	Gene ID= ENSG00000150403.17 TPM= 5.4 Transcript Type= NA
chr13	113491003	113550195	113491003	113550195	+	transcript2027.chr13.nnic@TMCO3	transcript2027.chr13.nnic	protein_coding	113491003,113495502,113498342,113501752,113503496,113510238,113520616,113534045,113539357,113547300,113548303,113549425	113491273,113496025,113498521,113501880,113503588,113510424,113520733,113534240,113539507,113547379,113548452,113550195	Gene ID= ENSG00000150403.17 TPM= 14.24 Transcript Type= NA
chr13	113491034	113550195	113491034	113550195	+	transcript2030.chr13.nnic@TMCO3	transcript2030.chr13.nnic	protein_coding	113491034,113495502,113498342,113499958,113501752,113503496,113534045,113539357,113547300,113548303,113549425	113491273,113496025,113498521,113500149,113501880,113503588,113534240,113539507,113547379,113548452,113550195	Gene ID= ENSG00000150403.17 TPM= 5.4 Transcript Type= NA
chr13	113491014	113526282	113491014	113526282	+	transcript2036.chr13.nnic@TMCO3	transcript2036.chr13.nnic	protein_coding	113491014,113495502,113498342,113499958,113501752,113503496,113510238,113520616,113525466	113491273,113496025,113498521,113500149,113501880,113503588,113510424,113520733,113526282	Gene ID= ENSG00000150403.17 TPM= 4.33 Transcript Type= NA
chr13	113490995	113550195	113490995	113550195	+	ENST00000434316.6@TMCO3	ENST00000434316.6	protein_coding	113490995,113495502,113498342,113499958,113501752,113503496,113510238,113520616,113534045,113539357,113547300,113548303,113549425	113491273,113496025,113498521,113500149,113501880,113503588,113510424,113520733,113534240,113539507,113547379,113548452,113550195	Gene ID= ENSG00000150403.17 TPM= 96.74 Transcript Type= protein_coding
chr13	113491096	113535286	113491096	113535286	+	ENST00000474393.5@TMCO3	ENST00000474393.5	protein_coding	113491096,113495502,113498342,113499958,113501752,113503496,113510238,113520616,113534045	113491273,113496025,113498521,113500149,113501880,113503588,113510424,113520733,113535286	Gene ID= ENSG00000150403.17 TPM= 7.44 Transcript Type= protein_coding
chr13	113584577	113641473	113584577	113641473	+	transcript2085.chr13.nnic@TFDP1	transcript2085.chr13.nnic	protein_coding	113584577,113585774,113610996,113623180,113631623,113633120,113633890,113634534,113635977,113636534,113637818,113640120	113584730,113585849,113611062,113623286,113631744,113633285,113634033,113634602,113636128,113636700,113637884,113641473	Gene ID= ENSG00000198176.12 TPM= 2.12 Transcript Type= NA
chr13	113584699	113641473	113584699	113641473	+	transcript2088.chr13.nnic@TFDP1	transcript2088.chr13.nnic	protein_coding	113584699,113585774,113610996,113623180,113631623,113633120,113633890,113634534,113635977,113636534,113637818,113640120	113584888,113585849,113611062,113623286,113631744,113633285,113634033,113634602,113636128,113636700,113637884,113641473	Gene ID= ENSG00000198176.12 TPM= 6.37 Transcript Type= NA
chr13	113584713	113641473	113584713	113641473	+	transcript2093.chr13.nnic@TFDP1	transcript2093.chr13.nnic	protein_coding	113584713,113585774,113610996,113623180,113631623,113633120,113633890,113634534,113635977,113636534,113637818,113640120	113585427,113585849,113611062,113623286,113631744,113633285,113634033,113634602,113636128,113636700,113637884,113641473	Gene ID= ENSG00000198176.12 TPM= 2.12 Transcript Type= NA
chr13	113584699	113638881	113584699	113638881	+	transcript2098.chr13.nic@TFDP1	transcript2098.chr13.nic	protein_coding	113584699,113585774,113610996,113623180,113631623,113633120,113633890,113634534,113635977,113636534,113637818	113584888,113585849,113611062,113623286,113631744,113633285,113634033,113634602,113636128,113636700,113638881	Gene ID= ENSG00000198176.12 TPM= 2.12 Transcript Type= NA
chr13	113584699	113641473	113584699	113641473	+	transcript2103.chr13.nnic@TFDP1	transcript2103.chr13.nnic	protein_coding	113584699,113585774,113610996,113623180,113633120,113633890,113634534,113635977,113636534,113637818,113640120	113584888,113585849,113611062,113623286,113633285,113634033,113634602,113636128,113636700,113637884,113641473	Gene ID= ENSG00000198176.12 TPM= 2.12 Transcript Type= NA
chr13	113584771	113641470	113584771	113641470	+	transcript2105.chr13.nnic@TFDP1	transcript2105.chr13.nnic	protein_coding	113584771,113585774,113623180,113631623,113633120,113633890,113634534,113635977,113636534,113637818,113640120	113584888,113585849,113623286,113631744,113633285,113634033,113634602,113636128,113636700,113637896,113641470	Gene ID= ENSG00000198176.12 TPM= 3.19 Transcript Type= NA
chr13	113584713	113641473	113584713	113641473	+	transcript2106.chr13.nnic@TFDP1	transcript2106.chr13.nnic	protein_coding	113584713,113585774,113610996,113623180,113631623,113633120,113633890,113634534,113635977,113636534,113640120	113585427,113585849,113611062,113623286,113631744,113633285,113634033,113634602,113636128,113636700,113641473	Gene ID= ENSG00000198176.12 TPM= 2.12 Transcript Type= NA
chr13	113584713	113586180	113584713	113586180	+	transcript2111.chr13.nic@TFDP1	transcript2111.chr13.nic	protein_coding	113584713,113585580,113585774,113585966	113584888,113585677,113585849,113586180	Gene ID= ENSG00000198176.12 TPM= 2.12 Transcript Type= NA
chr13	113584741	113641470	113584741	113641470	+	ENST00000375370.9@TFDP1	ENST00000375370.9	protein_coding	113584741,113585774,113610996,113623180,113631623,113633120,113633890,113634534,113635977,113636534,113637818,113640120	113584888,113585849,113611062,113623286,113631744,113633285,113634033,113634602,113636128,113636700,113637896,113641470	Gene ID= ENSG00000198176.12 TPM= 49.92 Transcript Type= protein_coding
chr13	113584733	113586180	113584733	113586180	+	ENST00000464794.5@TFDP1	ENST00000464794.5	protein_coding	113584733,113585774,113585966	113584888,113585849,113586180	Gene ID= ENSG00000198176.12 TPM= 1.06 Transcript Type= processed_transcript
chr13	113756086	113759152	113756086	113759152	-	transcript2114.chr13.nnic@NA	transcript2114.chr13.nnic	NA	113756086	113759152	Gene ID= novel_gene_chr13_2115 TPM= 2.12 Transcript Type= NA
chr13	113820549	113823194	113820549	113823194	-	ENST00000608763.1@GAS6	ENST00000608763.1	protein_coding	113820549	113823194	Gene ID= ENSG00000183087.14 TPM= 78.89 Transcript Type= retained_intron
chr13	113820558	113864067	113820558	113864067	-	ENST00000327773.6@GAS6	ENST00000327773.6	protein_coding	113863833,113863575,113848026,113846527,113839728,113838069,113835513,113834551,113832634,113832299,113828547,113826996,113823375,113821958,113820558	113864067,113863741,113848050,113846589,113839850,113838191,113835635,113834672,113832752,113832488,113828711,113827164,113823550,113822186,113821018	Gene ID= ENSG00000183087.14 TPM= 1010.95 Transcript Type= protein_coding
chr13	113864168	113866833	113864168	113866833	+	ENST00000608651.1@GAS6-AS2	ENST00000608651.1	lincRNA	113864168,113865010	113864295,113866833	Gene ID= ENSG00000272695.1 TPM= 2.12 Transcript Type= lincRNA
chr13	113977783	114132611	113977783	114132611	-	ENST00000334062.7@RASA3	ENST00000334062.7	protein_coding	114132435,114073720,114052052,114041000,114029811,114027847,114027389,114024279,114021404,114018763,114018104,114017237,114016197,114015209,114013142,114011171,114009387,114007533,114000826,113999585,113996531,113992485,113981675,113977783	114132611,114073837,114052155,114041094,114029887,114027927,114027461,114024355,114021508,114018919,114018252,114017351,114016271,114015332,114013248,114011248,114009464,114007606,114000932,113999667,113996739,113992588,113981858,113979422	Gene ID= ENSG00000185989.10 TPM= 16.99 Transcript Type= protein_coding
chr13	114036549	114038305	114036549	114038305	-	transcript2161.chr13.nnic@NA	transcript2161.chr13.nnic	NA	114036549	114038305	Gene ID= novel_gene_chr13_2162 TPM= 2.12 Transcript Type= NA
chr13	114128929	114132591	114128929	114132591	-	transcript2159.chr13.nnic@NA	transcript2159.chr13.nnic	NA	114128929	114132591	Gene ID= novel_gene_chr13_2160 TPM= 2.12 Transcript Type= NA
chr13	114234918	114272675	114234918	114272675	+	transcript2163.chr13.nnic@CDC16	transcript2163.chr13.nnic	protein_coding	114234918,114236645,114236799,114237672,114237844,114238990,114239350,114242121,114243257,114243856,114244890,114246000,114246931,114250549,114257078,114259335,114261887,114262879,114265150,114272184	114235132,114236699,114236896,114237739,114237962,114239028,114239490,114242280,114243348,114243989,114244969,114246049,114247004,114250674,114257230,114259398,114261948,114263014,114265240,114272675	Gene ID= ENSG00000130177.14 TPM= 2.47 Transcript Type= NA
chr13	114234872	114272675	114234872	114272675	+	transcript2180.chr13.nnic@CDC16	transcript2180.chr13.nnic	protein_coding	114234872,114238990,114239350,114242121,114243257,114243856,114244890,114246000,114246931,114250549,114257078,114259335,114261887,114262879,114265150,114272184	114235132,114239028,114239490,114242280,114243348,114243989,114244969,114246049,114247004,114250674,114257230,114259398,114261948,114263014,114265240,114272675	Gene ID= ENSG00000130177.14 TPM= 7.79 Transcript Type= NA
chr13	114234977	114272675	114234977	114272675	+	ENST00000356221.7@CDC16	ENST00000356221.7	protein_coding	114234977,114236645,114236799,114238990,114239350,114242121,114243257,114243856,114244890,114246000,114246931,114250549,114257078,114259335,114261887,114262879,114265150,114272184	114235132,114236699,114236896,114239028,114239490,114242280,114243348,114243989,114244969,114246049,114247004,114250674,114257230,114259398,114261948,114263014,114265240,114272675	Gene ID= ENSG00000130177.14 TPM= 15.22 Transcript Type= protein_coding
chr13	114281583	114291718	114281583	114291718	+	transcript2197.chr13.nnic@UPF3A	transcript2197.chr13.nnic	protein_coding	114281583,114282021,114286302,114286519,114291489,114291634	114281846,114284358,114286400,114286629,114291544,114291718	Gene ID= ENSG00000169062.14 TPM= 2.12 Transcript Type= NA
chr13	114281930	114305808	114281930	114305808	+	transcript2208.chr13.nnic@UPF3A	transcript2208.chr13.nnic	protein_coding	114281930,114301731,114304789	114282127,114302025,114305808	Gene ID= ENSG00000169062.14 TPM= 9.56 Transcript Type= NA
chr13	114281925	114284549	114281925	114284549	+	transcript2211.chr13.nic@UPF3A	transcript2211.chr13.nic	protein_coding	114281925,114282837	114282127,114284549	Gene ID= ENSG00000169062.14 TPM= 3.19 Transcript Type= NA
chr13	114281603	114282270	114281603	114282270	+	ENST00000492270.1@UPF3A	ENST00000492270.1	protein_coding	114281603,114282021	114281846,114282270	Gene ID= ENSG00000169062.14 TPM= 8.5 Transcript Type= protein_coding
chr13	114284845	114287619	114284845	114287619	+	transcript2214.chr13.nnic@NA	transcript2214.chr13.nnic	NA	114284845	114287619	Gene ID= novel_gene_chr13_2215 TPM= 3.19 Transcript Type= NA
chr14	20286228	20305994	20286228	20305994	-	ENST00000258821.7@TTC5	ENST00000258821.7	protein_coding	20305887,20301833,20300607,20299298,20298797,20296390,20295708,20295312,20291983,20286228	20305994,20301965,20300818,20299448,20298888,20296446,20295854,20295526,20292127,20289746	Gene ID= ENSG00000136319.11 TPM= 3.19 Transcript Type= protein_coding
chr14	20311370	20333288	20311370	20333288	-	ENST00000358932.8@CCNB1IP1	ENST00000358932.8	protein_coding	20333254,20329174,20326716,20325539,20316227,20313468,20311370	20333288,20329373,20326793,20325653,20316560,20313801,20311752	Gene ID= ENSG00000100814.17 TPM= 32.4 Transcript Type= protein_coding
chr14	20311368	20333010	20311368	20333010	-	ENST00000398160.6@CCNB1IP1	ENST00000398160.6	protein_coding	20332844,20329174,20326716,20325539,20316227,20313468,20311368	20333010,20329373,20326793,20325653,20316560,20313801,20311752	Gene ID= ENSG00000100814.17 TPM= 13.28 Transcript Type= protein_coding
chr14	20343582	20357905	20343582	20357905	+	ENST00000429687.7@PARP2	ENST00000429687.7	protein_coding	20343582,20344932,20345394,20346863,20350526,20351047,20352245,20354085,20354809,20355752,20355897,20356307,20356590,20357051,20357396,20357638	20343687,20345087,20345464,20346913,20350622,20351122,20352347,20354247,20354947,20355815,20356031,20356434,20356689,20357149,20357520,20357905	Gene ID= ENSG00000129484.13 TPM= 13.81 Transcript Type= protein_coding
chr14	20343615	20357904	20343615	20357904	+	ENST00000250416.9@PARP2	ENST00000250416.9	protein_coding	20343615,20344932,20345394,20346863,20350526,20351047,20352245,20354085,20354809,20355752,20355897,20356307,20356590,20357051,20357396,20357638	20343687,20345126,20345464,20346913,20350622,20351122,20352347,20354247,20354947,20355815,20356031,20356434,20356689,20357149,20357520,20357904	Gene ID= ENSG00000129484.13 TPM= 10.62 Transcript Type= protein_coding
chr14	20365667	20413421	20365667	20413421	-	ENST00000262715.9@TEP1	ENST00000262715.9	protein_coding	20413405,20407873,20406233,20405451,20404611,20403723,20403377,20401457,20400984,20396621,20395859,20395450,20391599,20390938,20390681,20389610,20389238,20387905,20386447,20386075,20384985,20384600,20384391,20384038,20383743,20383488,20383174,20382623,20382224,20381913,20381553,20381313,20380931,20380235,20379930,20378981,20378754,20378380,20378024,20377600,20377280,20376104,20375755,20374429,20373678,20373507,20373270,20373011,20372733,20371489,20371218,20369674,20369344,20368798,20365667	20413421,20408463,20406400,20405585,20404772,20403884,20403448,20401581,20401141,20396730,20395949,20395627,20391767,20391096,20390758,20389740,20389297,20388063,20386623,20386195,20385109,20384713,20384508,20384232,20383918,20383644,20383353,20382715,20382356,20382063,20381686,20381401,20381045,20380475,20380053,20379105,20378853,20378535,20378236,20377753,20377492,20376264,20375868,20374536,20373810,20373583,20373402,20373147,20372857,20371632,20371314,20369779,20369576,20368902,20368559	Gene ID= ENSG00000129566.12 TPM= 2.12 Transcript Type= protein_coding
chr14	20446668	20455105	20446668	20455105	-	ENST00000206542.8@OSGEP	ENST00000206542.8	protein_coding	20454569,20452329,20451974,20449171,20448964,20448733,20448106,20447904,20447615,20447422,20446668	20455105,20452448,20452149,20449266,20449013,20448811,20448171,20447994,20447690,20447520,20447279	Gene ID= ENSG00000092094.10 TPM= 24.43 Transcript Type= protein_coding
chr14	20455191	20457772	20455191	20457772	+	ENST00000555414.5@APEX1	ENST00000555414.5	protein_coding	20455191,20455578,20455914,20456668,20456991	20455338,20455703,20456101,20456860,20457772	Gene ID= ENSG00000100823.11 TPM= 12.4 Transcript Type= protein_coding
chr14	20455226	20457767	20455226	20457767	+	ENST00000398030.8@APEX1	ENST00000398030.8	protein_coding	20455226,20455578,20455914,20456668,20456991	20455328,20455703,20456101,20456860,20457767	Gene ID= ENSG00000100823.11 TPM= 7.08 Transcript Type= protein_coding
chr14	20455195	20457767	20455195	20457767	+	ENST00000216714.7@APEX1	ENST00000216714.7	protein_coding	20455195,20455578,20455914,20456668,20456991	20455394,20455703,20456101,20456860,20457767	Gene ID= ENSG00000100823.11 TPM= 78.25 Transcript Type= protein_coding
chr14	20455240	20457738	20455240	20457738	+	ENST00000557159.5@APEX1	ENST00000557159.5	protein_coding	20455240,20456668,20456991	20456101,20456860,20457738	Gene ID= ENSG00000100823.11 TPM= 5.31 Transcript Type= retained_intron
chr14	20455226	20457734	20455226	20457734	+	ENST00000553555.5@APEX1	ENST00000553555.5	protein_coding	20455226,20455914,20456668,20456991	20455703,20456101,20456860,20457734	Gene ID= ENSG00000100823.11 TPM= 2.12 Transcript Type= retained_intron
chr14	20457719	20461612	20457719	20461612	-	ENST00000250489.8@TMEM55B	ENST00000250489.8	protein_coding	20461184,20460655,20460192,20459628,20459388,20459206,20457719	20461612,20460845,20460298,20459733,20459440,20459296,20458702	Gene ID= ENSG00000165782.10 TPM= 22.31 Transcript Type= protein_coding
chr14	20457858	20461465	20457858	20461465	-	ENST00000398020.6@TMEM55B	ENST00000398020.6	protein_coding	20461163,20460655,20460192,20459628,20459388,20459206,20457858	20461465,20460845,20460298,20459733,20459440,20459296,20458702	Gene ID= ENSG00000165782.10 TPM= 39.3 Transcript Type= protein_coding
chr14	20469379	20477094	20469379	20477094	+	ENST00000361505.9@PNP	ENST00000361505.9	protein_coding	20469379,20472308,20474472,20474773,20475062,20476384	20469535,20472477,20474575,20474948,20475252,20477094	Gene ID= ENSG00000198805.11 TPM= 7.97 Transcript Type= protein_coding
chr14	20469410	20477087	20469410	20477087	+	transcript41.chr14.nic@PNP	transcript41.chr14.nic	protein_coding	20469410,20472308,20475062,20476384	20469535,20474948,20475252,20477087	Gene ID= ENSG00000198805.11 TPM= 2.66 Transcript Type= NA
chr14	20469414	20477058	20469414	20477058	+	ENST00000554056.5@PNP	ENST00000554056.5	protein_coding	20469414,20472308,20474472,20475062,20476384	20469535,20472477,20474948,20475252,20477058	Gene ID= ENSG00000198805.11 TPM= 1.06 Transcript Type= retained_intron
chr14	20684100	20701215	20684100	20701215	+	ENST00000555835.2@RNASE4	ENST00000555835.2	protein_coding	20684100,20699355	20684758,20701215	Gene ID= ENSG00000258818.3 TPM= 9.56 Transcript Type= protein_coding
chr14	20684177	20694186	20684177	20694186	+	ENST00000336811.10@ANG	ENST00000336811.10	protein_coding	20684177,20693547	20684758,20694186	Gene ID= ENSG00000214274.9 TPM= 1.06 Transcript Type= protein_coding
chr14	20801346	20802855	20801346	20802855	-	ENST00000340900.3@RNASE1	ENST00000340900.3	protein_coding	20802797,20802249,20801346	20802855,20802319,20802093	Gene ID= ENSG00000129538.13 TPM= 106.22 Transcript Type= protein_coding
chr14	20801228	20803278	20801228	20803278	-	ENST00000397967.4@RNASE1	ENST00000397967.4	protein_coding	20802797,20801228	20803278,20802093	Gene ID= ENSG00000129538.13 TPM= 132.77 Transcript Type= protein_coding
chr14	20989770	20997035	20989770	20997035	+	ENST00000339374.10@METTL17	ENST00000339374.10	protein_coding	20989770,20990230,20990464,20992124,20992541,20993118,20993969,20994543,20994794,20995165,20995901,20996209,20996527,20996785	20990077,20990383,20990598,20992205,20992622,20993191,20994063,20994613,20994901,20995233,20995951,20996292,20996711,20997035	Gene ID= ENSG00000165792.17 TPM= 34.52 Transcript Type= protein_coding
chr14	20989775	20997030	20989775	20997030	+	transcript55.chr14.nic@METTL17	transcript55.chr14.nic	protein_coding	20989775,20990230,20990464,20992092,20992541,20993118,20993969,20994543,20994794,20995901,20996209,20996527,20996785	20990077,20990383,20990598,20992205,20992622,20993191,20994063,20994613,20995233,20995951,20996292,20996711,20997030	Gene ID= ENSG00000165792.17 TPM= 2.66 Transcript Type= NA
chr14	20990003	20997016	20990003	20997016	+	ENST00000557550.6@METTL17	ENST00000557550.6	protein_coding	20990003,20990230,20990464,20992092,20992541,20993118,20993969,20994543,20994794,20995165,20995901,20996209,20996527,20996785	20990077,20990383,20990598,20992205,20992622,20993191,20994063,20994613,20994901,20995233,20995951,20996292,20996711,20997016	Gene ID= ENSG00000165792.17 TPM= 1.06 Transcript Type= nonsense_mediated_decay
chr14	20989994	20997010	20989994	20997010	+	ENST00000555533.6@METTL17	ENST00000555533.6	protein_coding	20989994,20990230,20990464,20992092,20992541,20993118,20993969,20994543,20994794,20995165,20995901,20996209,20996527	20990077,20990383,20990598,20992205,20992622,20993191,20994063,20994613,20994901,20995233,20995951,20996292,20997010	Gene ID= ENSG00000165792.17 TPM= 1.06 Transcript Type= nonsense_mediated_decay
chr14	20989987	20997030	20989987	20997030	+	ENST00000556670.6@METTL17	ENST00000556670.6	protein_coding	20989987,20990230,20990464,20992124,20992541,20993118,20993969,20994543,20994794,20995165,20995901,20996209,20996527,20996812	20990077,20990383,20990598,20992205,20992622,20993191,20994063,20994613,20994901,20995233,20995951,20996292,20996711,20997030	Gene ID= ENSG00000165792.17 TPM= 1.06 Transcript Type= protein_coding
chr14	20989980	20997009	20989980	20997009	+	ENST00000382985.8@METTL17	ENST00000382985.8	protein_coding	20989980,20990230,20990464,20992124,20992541,20993118,20993969,20994543,20994794,20995165,20995901,20996209,20996527	20990077,20990383,20990598,20992205,20992622,20993191,20994063,20994613,20994901,20995233,20995951,20996292,20997009	Gene ID= ENSG00000165792.17 TPM= 1.06 Transcript Type= protein_coding
chr14	21016763	21025776	21016763	21025776	-	ENST00000298687.9@NDRG2	ENST00000298687.9	protein_coding	21025677,21024030,21023241,21022864,21022392,21022062,21021817,21020784,21020496,21019920,21019639,21019116,21018763,21018457,21018204,21017987,21016763	21025776,21024096,21023321,21022905,21022497,21022182,21021879,21020844,21020582,21019976,21019742,21019160,21018814,21018504,21018239,21018038,21017762	Gene ID= ENSG00000165795.23 TPM= 33.95 Transcript Type= protein_coding
chr14	21016772	21025039	21016772	21025039	-	ENST00000553503.5@NDRG2	ENST00000553503.5	protein_coding	21024849,21024030,21023241,21022392,21022062,21021817,21020784,21020496,21019920,21019639,21019116,21018763,21018457,21018204,21017987,21016772	21025039,21024096,21023321,21022497,21022182,21021879,21020844,21020582,21019976,21019742,21019160,21018814,21018504,21018239,21018038,21017762	Gene ID= ENSG00000165795.23 TPM= 8.01 Transcript Type= protein_coding
chr14	21016772	21025127	21016772	21025127	-	transcript85.chr14.nic@NDRG2	transcript85.chr14.nic	protein_coding	21025029,21024030,21023241,21022392,21022062,21021817,21020784,21020496,21019920,21019639,21019116,21018763,21018457,21018204,21017987,21016772	21025127,21024096,21023321,21022497,21022182,21021879,21020844,21020582,21019976,21019742,21019160,21018814,21018504,21018239,21018038,21017762	Gene ID= ENSG00000165795.23 TPM= 33.5 Transcript Type= NA
chr14	21016763	21025823	21016763	21025823	-	ENST00000350792.7@NDRG2	ENST00000350792.7	protein_coding	21025677,21024030,21023241,21022392,21022062,21021817,21020784,21020496,21019920,21019639,21019116,21018763,21018457,21018204,21017987,21016763	21025823,21024096,21023321,21022497,21022182,21021879,21020844,21020582,21019976,21019742,21019160,21018814,21018504,21018239,21018038,21017762	Gene ID= ENSG00000165795.23 TPM= 6.48 Transcript Type= protein_coding
chr14	21016772	21025175	21016772	21025175	-	transcript87.chr14.nic@NDRG2	transcript87.chr14.nic	protein_coding	21025029,21023241,21022864,21022392,21022062,21021817,21020784,21020496,21019920,21019639,21019116,21018796,21018457,21018204,21017987,21016772	21025175,21023321,21022905,21022497,21022182,21021879,21020844,21020582,21019976,21019742,21019160,21018814,21018504,21018239,21018038,21017762	Gene ID= ENSG00000165795.23 TPM= 13.04 Transcript Type= NA
chr14	21016772	21025094	21016772	21025094	-	ENST00000397853.7@NDRG2	ENST00000397853.7	protein_coding	21025029,21024030,21023241,21022864,21022392,21022062,21021817,21020784,21020496,21019920,21019639,21019116,21018763,21018457,21018204,21017987,21016772	21025094,21024096,21023321,21022905,21022497,21022182,21021879,21020844,21020582,21019976,21019742,21019160,21018814,21018504,21018239,21018038,21017762	Gene ID= ENSG00000165795.23 TPM= 130.18 Transcript Type= protein_coding
chr14	21016764	21025776	21016764	21025776	-	ENST00000397858.5@NDRG2	ENST00000397858.5	protein_coding	21025677,21023241,21022864,21022392,21022062,21021817,21020784,21020496,21019920,21019639,21019116,21018763,21018457,21018204,21017987,21016764	21025776,21023321,21022905,21022497,21022182,21021879,21020844,21020582,21019976,21019742,21019160,21018814,21018504,21018239,21018038,21017762	Gene ID= ENSG00000165795.23 TPM= 42.64 Transcript Type= protein_coding
chr14	21016773	21025105	21016773	21025105	-	ENST00000397851.6@NDRG2	ENST00000397851.6	protein_coding	21025029,21023241,21022864,21022392,21022062,21021817,21020784,21020496,21019920,21019639,21019116,21018763,21018457,21018204,21017987,21016773	21025105,21023321,21022905,21022497,21022182,21021879,21020844,21020582,21019976,21019742,21019160,21018814,21018504,21018239,21018038,21017762	Gene ID= ENSG00000165795.23 TPM= 152.92 Transcript Type= protein_coding
chr14	21016773	21025105	21016773	21025105	-	ENST00000554143.5@NDRG2	ENST00000554143.5	protein_coding	21025029,21023241,21022392,21022062,21021817,21020784,21020496,21019920,21019639,21019116,21018763,21018457,21018204,21017987,21016773	21025105,21023321,21022497,21022182,21021879,21020844,21020582,21019976,21019742,21019160,21018814,21018504,21018239,21018038,21017762	Gene ID= ENSG00000165795.23 TPM= 51.8 Transcript Type= protein_coding
chr14	21070249	21089545	21070249	21089545	+	transcript116.chr14.nic@ARHGEF40	transcript116.chr14.nic	protein_coding	21070249,21073045,21073932,21075332,21075645,21076360,21076563,21076774,21078177,21078373,21078884,21080660,21080873,21081509,21082244,21082831,21083835,21084753,21085689,21087001,21087968,21088830,21089014	21070399,21073242,21075180,21075499,21075765,21076456,21076643,21076890,21078272,21078488,21079010,21080782,21081016,21082119,21082478,21082917,21084050,21084923,21085866,21087105,21088098,21088876,21089545	Gene ID= ENSG00000165801.9 TPM= 4.78 Transcript Type= NA
chr14	21070300	21089545	21070300	21089545	+	transcript120.chr14.nnic@ARHGEF40	transcript120.chr14.nnic	protein_coding	21070300,21073932,21075332,21075645,21076360,21076563,21076774,21078177,21078373,21078884,21080660,21081509,21082244,21082831,21083835,21084753,21085689,21087001,21087320,21087956,21088830,21089014	21070399,21075180,21075499,21075765,21076456,21076643,21076890,21078272,21078488,21079010,21080782,21082119,21082478,21082917,21084050,21084923,21085866,21087105,21087463,21088098,21088876,21089545	Gene ID= ENSG00000165801.9 TPM= 2.66 Transcript Type= NA
chr14	21070270	21090240	21070270	21090240	+	ENST00000298694.8@ARHGEF40	ENST00000298694.8	protein_coding	21070270,21073045,21073932,21075332,21075645,21076360,21076563,21076774,21078177,21078373,21078884,21080660,21080873,21081509,21082244,21082831,21083835,21084753,21085689,21087001,21087320,21087968,21088830,21089014	21070399,21073242,21075180,21075499,21075765,21076456,21076643,21076890,21078272,21078488,21079010,21080782,21081016,21082119,21082478,21082917,21084050,21084923,21085866,21087105,21087463,21088098,21088876,21090240	Gene ID= ENSG00000165801.9 TPM= 2.12 Transcript Type= protein_coding
chr14	21071985	21073575	21071985	21073575	-	transcript138.chr14.nnic@NA	transcript138.chr14.nnic	NA	21071985	21073575	Gene ID= novel_gene_chr14_139 TPM= 2.12 Transcript Type= NA
chr14	21090046	21098640	21090046	21098640	-	ENST00000360947.7@ZNF219	ENST00000360947.7	protein_coding	21098312,21093586,21091865,21091411,21090046	21098640,21093674,21093290,21091542,21091140	Gene ID= ENSG00000165804.15 TPM= 304.39 Transcript Type= protein_coding
chr14	21090052	21092687	21090052	21092687	-	transcript136.chr14.nnic@NA	transcript136.chr14.nnic	NA	21090052	21092687	Gene ID= novel_gene_chr14_137 TPM= 9.82 Transcript Type= NA
chr14	21200272	21204099	21200272	21204099	-	transcript142.chr14.nnic@NA	transcript142.chr14.nnic	NA	21200272	21204099	Gene ID= novel_gene_chr14_143 TPM= 4.25 Transcript Type= NA
chr14	21210550	21269440	21210550	21269440	-	transcript154.chr14.nic@HNRNPC	transcript154.chr14.nic	protein_coding	21269298,21233953,21230997,21230319,21212960,21211810,21211406,21210550	21269440,21234229,21231072,21230366,21213117,21211923,21211566,21211306	Gene ID= ENSG00000092199.17 TPM= 47.27 Transcript Type= NA
chr14	21210582	21269403	21210582	21269403	-	ENST00000553753.5@HNRNPC	ENST00000553753.5	protein_coding	21269298,21263311,21233953,21230997,21230319,21212960,21211810,21210582	21269403,21263336,21234229,21231072,21230366,21213117,21211923,21211566	Gene ID= ENSG00000092199.17 TPM= 1.06 Transcript Type= protein_coding
chr14	21210937	21269442	21210937	21269442	-	ENST00000553300.5@HNRNPC	ENST00000553300.5	protein_coding	21269298,21263311,21233953,21230997,21230319,21212960,21211810,21211406,21210937	21269442,21263336,21234229,21231072,21230366,21213117,21211923,21211566,21211306	Gene ID= ENSG00000092199.17 TPM= 51.51 Transcript Type= protein_coding
chr14	21210937	21269425	21210937	21269425	-	ENST00000557201.5@HNRNPC	ENST00000557201.5	protein_coding	21269298,21233953,21230958,21230319,21212960,21211810,21211406,21210937	21269425,21234229,21231072,21230366,21213117,21211923,21211566,21211306	Gene ID= ENSG00000092199.17 TPM= 9.56 Transcript Type= protein_coding
chr14	21221911	21226893	21221911	21226893	+	transcript160.chr14.nnic@NA	transcript160.chr14.nnic	NA	21221911	21226893	Gene ID= novel_gene_chr14_161 TPM= 6.37 Transcript Type= NA
chr14	21351472	21384266	21351472	21384266	-	ENST00000216297.6@SUPT16H	ENST00000216297.6	protein_coding	21383862,21373338,21371874,21370336,21369750,21369204,21368269,21366439,21365070,21364827,21363438,21363233,21363034,21362794,21362197,21361078,21360846,21360415,21359484,21358315,21357927,21357197,21354411,21353703,21353488,21351472	21384266,21373430,21372044,21370488,21369896,21369355,21368441,21366529,21365143,21364939,21363503,21363328,21363149,21362947,21362324,21361213,21360972,21360533,21359609,21358427,21358002,21357366,21354540,21353832,21353565,21352818	Gene ID= ENSG00000092201.9 TPM= 61.61 Transcript Type= protein_coding
chr14	21385199	21386344	21385199	21386344	-	ENST00000557727.1@CHD8	ENST00000557727.1	protein_coding	21385199	21386344	Gene ID= ENSG00000100888.12 TPM= 3.19 Transcript Type= retained_intron
chr14	21477178	21489231	21477178	21489231	+	transcript190.chr14.nic@TOX4	transcript190.chr14.nic	protein_coding	21477178,21477496,21487451,21488590,21489173	21477284,21477564,21487693,21488850,21489231	Gene ID= ENSG00000092203.13 TPM= 12.21 Transcript Type= NA
chr14	21477182	21496227	21477182	21496227	+	ENST00000613005.4@TOX4	ENST00000613005.4	protein_coding	21477182,21477496,21487451,21489173,21492296,21492508,21495229	21477284,21477564,21488850,21489403,21492376,21493257,21496227	Gene ID= ENSG00000092203.13 TPM= 22.84 Transcript Type= retained_intron
chr14	21498138	21511375	21498138	21511375	-	ENST00000298717.8@METTL3	ENST00000298717.8	protein_coding	21511124,21503664,21503173,21501728,21500913,21500495,21499764,21499492,21499306,21499025,21498138	21511375,21503881,21503577,21501903,21501129,21500682,21499802,21499600,21499371,21499137,21498369	Gene ID= ENSG00000165819.11 TPM= 39.3 Transcript Type= protein_coding
chr14	21498146	21511362	21498146	21511362	-	transcript185.chr14.nic@METTL3	transcript185.chr14.nic	protein_coding	21511124,21503664,21503173,21501728,21500913,21500495,21499764,21499025,21498146	21511362,21503881,21503577,21501903,21501129,21500682,21499802,21499600,21498369	Gene ID= ENSG00000165819.11 TPM= 4.25 Transcript Type= NA
chr14	21498146	21511362	21498146	21511362	-	transcript187.chr14.nic@METTL3	transcript187.chr14.nic	protein_coding	21511124,21503664,21503173,21500913,21500495,21499764,21499025,21498146	21511362,21503881,21503577,21501903,21500682,21499802,21499600,21498369	Gene ID= ENSG00000165819.11 TPM= 2.12 Transcript Type= NA
chr14	21498173	21511310	21498173	21511310	-	ENST00000543235.5@METTL3	ENST00000543235.5	protein_coding	21511124,21503664,21503173,21501728,21500913,21500495,21499764,21499025,21498173	21511310,21503881,21503577,21501824,21501129,21500682,21499802,21499600,21498369	Gene ID= ENSG00000165819.11 TPM= 2.12 Transcript Type= nonsense_mediated_decay
chr14	22564905	22589269	22564905	22589269	-	ENST00000250498.8@DAD1	ENST00000250498.8	protein_coding	22588947,22575059,22564905	22589269,22575233,22565137	Gene ID= ENSG00000129562.10 TPM= 106.22 Transcript Type= protein_coding
chr14	22564908	22589157	22564908	22589157	-	ENST00000538631.1@DAD1	ENST00000538631.1	protein_coding	22588947,22564908	22589157,22565137	Gene ID= ENSG00000129562.10 TPM= 1.06 Transcript Type= protein_coding
chr14	22598237	22613215	22598237	22613215	+	ENST00000428304.6@ABHD4	ENST00000428304.6	protein_coding	22598237,22601667,22603390,22603925,22606422,22609724,22610859	22598329,22601755,22603762,22604079,22606533,22609910,22613215	Gene ID= ENSG00000100439.10 TPM= 8.5 Transcript Type= protein_coding
chr14	22766522	22771789	22766522	22771789	+	ENST00000285848.9@OXA1L	ENST00000285848.9	protein_coding	22766522,22767248,22767958,22769791,22770193,22770461,22770805,22771018,22771268,22771434	22766764,22767409,22768171,22769934,22770278,22770625,22770909,22771180,22771348,22771789	Gene ID= ENSG00000155463.12 TPM= 161.45 Transcript Type= protein_coding
chr14	22773222	22780238	22773222	22780238	-	transcript209.chr14.nnic@SLC7A7	transcript209.chr14.nnic	protein_coding	22780085,22778793,22776195,22775833,22775444,22774354,22773933,22773222	22780238,22778937,22776318,22775936,22775540,22774503,22774116,22773716	Gene ID= ENSG00000155465.18 TPM= 2.12 Transcript Type= NA
chr14	22829883	22835037	22829883	22835037	+	ENST00000355151.9@MRPL52	ENST00000355151.9	protein_coding	22829883,22830050,22830187,22833418,22834172	22829940,22830110,22830254,22833482,22835037	Gene ID= ENSG00000172590.18 TPM= 58.42 Transcript Type= protein_coding
chr14	22829921	22834347	22829921	22834347	+	ENST00000556840.5@MRPL52	ENST00000556840.5	protein_coding	22829921,22830050,22830187,22833418,22834172	22829948,22830110,22830254,22833482,22834347	Gene ID= ENSG00000172590.18 TPM= 44.61 Transcript Type= protein_coding
chr14	22871613	22881580	22871613	22881580	+	ENST00000359591.8@LRP10	ENST00000359591.8	protein_coding	22871613,22872738,22873311,22875055,22875355,22876689,22876940	22872337,22872782,22873446,22875245,22876372,22876818,22881580	Gene ID= ENSG00000197324.8 TPM= 30.8 Transcript Type= protein_coding
chr14	22900766	22919194	22900766	22919194	-	transcript236.chr14.nic@RBM23	transcript236.chr14.nic	protein_coding	22918999,22911328,22909483,22908333,22906195,22905336,22905094,22904875,22904261,22902187,22901980,22901814,22900766	22919194,22911403,22909595,22908380,22906368,22905453,22905246,22905012,22904326,22902382,22902099,22901883,22901733	Gene ID= ENSG00000100461.17 TPM= 7.7 Transcript Type= NA
chr14	22900766	22919194	22900766	22919194	-	transcript241.chr14.nic@RBM23	transcript241.chr14.nic	protein_coding	22918999,22911328,22909483,22905336,22905094,22904875,22904261,22902187,22901980,22901814,22900766	22919194,22911403,22909595,22906368,22905246,22905012,22904326,22902382,22902099,22901883,22901733	Gene ID= ENSG00000100461.17 TPM= 3.45 Transcript Type= NA
chr14	22900777	22919178	22900777	22919178	-	ENST00000346528.9@RBM23	ENST00000346528.9	protein_coding	22918999,22911328,22909483,22906195,22905336,22905094,22904875,22904261,22902187,22901980,22901814,22900777	22919178,22911403,22909595,22906368,22905453,22905246,22905012,22904326,22902382,22902099,22901883,22901733	Gene ID= ENSG00000100461.17 TPM= 10.89 Transcript Type= protein_coding
chr14	22900766	22919182	22900766	22919182	-	ENST00000399922.6@RBM23	ENST00000399922.6	protein_coding	22918999,22911328,22909483,22906195,22905606,22905336,22905094,22904875,22904261,22902187,22901980,22901814,22900766	22919182,22911403,22909595,22906368,22905659,22905453,22905246,22905012,22904326,22902382,22902099,22901883,22901733	Gene ID= ENSG00000100461.17 TPM= 5.58 Transcript Type= protein_coding
chr14	22920529	22929373	22920529	22929373	-	transcript245.chr14.nnic@PRMT5	transcript245.chr14.nnic	protein_coding	22929252,22928497,22928126,22927526,22926702,22926506,22926133,22924879,22924632,22924479,22924270,22924008,22923051,22922742,22922443,22922176,22921045,22920840,22920529	22929373,22928615,22928211,22927660,22926814,22926555,22926296,22925040,22924709,22924537,22924392,22924183,22923160,22922835,22922559,22922240,22921056,22920929,22920731	Gene ID= ENSG00000100462.15 TPM= 2.55 Transcript Type= NA
chr14	22920529	22929375	22920529	22929375	-	transcript246.chr14.nic@PRMT5	transcript246.chr14.nic	protein_coding	22929252,22928497,22928126,22927526,22926702,22926506,22926133,22924879,22924632,22924479,22924270,22924008,22923051,22922742,22922443,22922176,22920840,22920529	22929375,22928615,22928211,22927660,22926814,22926555,22926296,22925040,22924709,22924537,22924392,22924183,22923160,22922835,22922559,22922240,22921056,22920731	Gene ID= ENSG00000100462.15 TPM= 5.74 Transcript Type= NA
chr14	22920529	22929371	22920529	22929371	-	transcript247.chr14.nic@PRMT5	transcript247.chr14.nic	protein_coding	22929252,22928497,22928126,22927526,22926702,22926506,22926133,22924879,22924632,22924479,22924270,22924008,22923051,22922742,22922443,22922176,22920988,22920529	22929371,22928615,22928211,22927660,22926814,22926555,22926296,22925040,22924709,22924537,22924392,22924183,22923160,22922835,22922559,22922240,22921056,22920731	Gene ID= ENSG00000100462.15 TPM= 2.55 Transcript Type= NA
chr14	22920511	22929585	22920511	22929585	-	ENST00000324366.12@PRMT5	ENST00000324366.12	protein_coding	22929252,22928497,22928126,22927526,22926702,22926506,22926133,22924879,22924632,22924479,22924270,22924008,22923051,22922742,22922443,22922176,22920511	22929585,22928615,22928211,22927660,22926814,22926555,22926296,22925040,22924709,22924537,22924392,22924183,22923160,22922835,22922559,22922240,22921056	Gene ID= ENSG00000100462.15 TPM= 56.72 Transcript Type= protein_coding
chr14	22920529	22929384	22920529	22929384	-	transcript255.chr14.nic@PRMT5	transcript255.chr14.nic	protein_coding	22929252,22928497,22928126,22924879,22924632,22924479,22924270,22924008,22923051,22922742,22922443,22922176,22920529	22929384,22928615,22928211,22925040,22924709,22924537,22924392,22924183,22923160,22922835,22922559,22922240,22921056	Gene ID= ENSG00000100462.15 TPM= 5.74 Transcript Type= NA
chr14	22946236	22957119	22946236	22957119	-	transcript260.chr14.nic@HAUS4	transcript260.chr14.nic	protein_coding	22956746,22955100,22952541,22952328,22951555,22950314,22947868,22947601,22947171,22946236	22957119,22955176,22952683,22952459,22951689,22950410,22948013,22947731,22947239,22946708	Gene ID= ENSG00000092036.18 TPM= 3.45 Transcript Type= NA
chr14	22946229	22957142	22946229	22957142	-	ENST00000541587.5@HAUS4	ENST00000541587.5	protein_coding	22956916,22955100,22952541,22952328,22951555,22950314,22947868,22947601,22947171,22946229	22957142,22955176,22952683,22952459,22951689,22950410,22948013,22947731,22947239,22946708	Gene ID= ENSG00000092036.18 TPM= 9.82 Transcript Type= protein_coding
chr14	22946236	22957119	22946236	22957119	-	transcript262.chr14.nic@HAUS4	transcript262.chr14.nic	protein_coding	22956746,22955100,22952328,22951555,22950314,22947868,22947601,22947171,22946236	22957119,22955176,22952459,22951689,22950410,22948013,22947731,22947239,22946708	Gene ID= ENSG00000092036.18 TPM= 2.39 Transcript Type= NA
chr14	22946261	22957126	22946261	22957126	-	ENST00000555367.5@HAUS4	ENST00000555367.5	protein_coding	22956916,22955100,22952541,22952328,22950314,22947868,22947601,22947171,22946261	22957126,22955176,22952683,22952459,22950410,22948013,22947731,22947239,22946708	Gene ID= ENSG00000092036.18 TPM= 2.12 Transcript Type= protein_coding
chr14	22946228	22957094	22946228	22957094	-	ENST00000490506.5@HAUS4	ENST00000490506.5	protein_coding	22956916,22955100,22952328,22951555,22950314,22947868,22947601,22947171,22946228	22957094,22955176,22952459,22951689,22950410,22948013,22947731,22947239,22946708	Gene ID= ENSG00000092036.18 TPM= 1.33 Transcript Type= protein_coding
chr14	22971174	22982642	22971174	22982642	-	ENST00000262713.6@AJUBA	ENST00000262713.6	protein_coding	22981261,22978344,22976645,22976456,22974974,22974839,22974047,22971174	22982642,22978445,22976712,22976518,22975104,22974890,22974115,22973568	Gene ID= ENSG00000129474.15 TPM= 5.31 Transcript Type= protein_coding
chr14	22982698	22994151	22982698	22994151	+	ENST00000557615.5@AL132780.2	ENST00000557615.5	antisense_RNA	22982698,22983507,22989749,22993810	22983081,22983593,22989956,22994151	Gene ID= ENSG00000258457.5 TPM= 1.06 Transcript Type= antisense_RNA
chr14	23025851	23035145	23025851	23035145	-	ENST00000361611.10@PSMB5	ENST00000361611.10	protein_coding	23034684,23033368,23025851	23035145,23033674,23026375	Gene ID= ENSG00000100804.18 TPM= 195.97 Transcript Type= protein_coding
chr14	23025858	23034890	23025858	23034890	-	ENST00000493471.2@PSMB5	ENST00000493471.2	protein_coding	23034684,23033368,23027745,23025858	23034890,23033674,23027829,23026375	Gene ID= ENSG00000100804.18 TPM= 2.66 Transcript Type= protein_coding
chr14	23058567	23095614	23058567	23095614	-	ENST00000262710.5@ACIN1	ENST00000262710.5	protein_coding	23094975,23093479,23090522,23089982,23081748,23079547,23078820,23078151,23069476,23065966,23064355,23064105,23063436,23062929,23062416,23062168,23061298,23061084,23058567	23095614,23093544,23090633,23090101,23081836,23080809,23079038,23078266,23069617,23066008,23064488,23064257,23063577,23063074,23062523,23062275,23061622,23061184,23059474	Gene ID= ENSG00000100813.14 TPM= 7.35 Transcript Type= protein_coding
chr14	23058567	23095614	23058567	23095614	-	ENST00000457657.5@ACIN1	ENST00000457657.5	protein_coding	23094975,23093479,23090522,23081748,23079547,23078820,23078151,23069476,23065966,23064355,23064105,23063436,23062929,23062416,23062168,23061298,23061084,23058567	23095614,23093544,23090633,23081836,23080809,23079038,23078266,23069617,23066008,23064488,23064257,23063577,23063074,23062523,23062275,23061622,23061184,23059474	Gene ID= ENSG00000100813.14 TPM= 7.35 Transcript Type= protein_coding
chr14	23058567	23071561	23058567	23071561	-	ENST00000338631.10@ACIN1	ENST00000338631.10	protein_coding	23071427,23069476,23065966,23064355,23064105,23063436,23062929,23062416,23062168,23061298,23061084,23058567	23071561,23069617,23066008,23064488,23064257,23063577,23063074,23062523,23062275,23061622,23061184,23059474	Gene ID= ENSG00000100813.14 TPM= 11.07 Transcript Type= protein_coding
chr14	23087465	23095137	23087465	23095137	-	transcript293.chr14.nic@ACIN1	transcript293.chr14.nic	protein_coding	23094975,23093479,23087465	23095137,23093544,23090633	Gene ID= ENSG00000100813.14 TPM= 2.12 Transcript Type= NA
chr14	23058580	23071565	23058580	23071565	-	ENST00000397341.7@ACIN1	ENST00000397341.7	protein_coding	23071125,23069476,23065966,23064355,23064105,23063436,23062929,23062416,23062168,23061298,23061084,23058580	23071565,23069617,23066008,23064488,23064257,23063577,23063074,23062523,23062275,23061622,23061184,23059474	Gene ID= ENSG00000100813.14 TPM= 1.86 Transcript Type= protein_coding
chr14	23094765	23100462	23094765	23100462	+	ENST00000319074.5@C14orf119	ENST00000319074.5	protein_coding	23094765,23097658	23095619,23100462	Gene ID= ENSG00000179933.5 TPM= 21.24 Transcript Type= protein_coding
chr14	23271832	23274778	23271832	23274778	-	transcript476.chr14.nnic@NA	transcript476.chr14.nnic	NA	23271832	23274778	Gene ID= novel_gene_chr14_477 TPM= 2.12 Transcript Type= NA
chr14	23296035	23301583	23296035	23301583	-	ENST00000558058.5@PPP1R3E	ENST00000558058.5	protein_coding	23301398,23300758,23299401,23296035	23301583,23300864,23299541,23298822	Gene ID= ENSG00000235194.8 TPM= 2.12 Transcript Type= protein_coding
chr14	23298587	23301475	23298587	23301475	-	ENST00000561437.1@PPP1R3E	ENST00000561437.1	protein_coding	23301398,23300758,23300107,23299401,23298587	23301475,23300864,23300139,23299541,23298917	Gene ID= ENSG00000235194.8 TPM= 1.06 Transcript Type= protein_coding
chr14	23306762	23311759	23306762	23311759	+	ENST00000250405.9@BCL2L2	ENST00000250405.9	protein_coding	23306762,23307192,23307760,23308816	23306894,23307279,23308199,23311759	Gene ID= ENSG00000129473.9 TPM= 31.86 Transcript Type= protein_coding
chr14	23381990	23408277	23381990	23408277	-	ENST00000405093.7@MYH6	ENST00000405093.7	protein_coding	23408253,23407576,23407023,23405627,23405223,23405100,23404711,23404296,23403715,23403348,23402697,23402464,23400709,23400256,23398728,23397543,23397170,23396963,23396694,23396284,23394068,23393666,23393342,23392912,23392562,23390057,23389593,23389393,23388859,23388155,23387758,23387529,23386315,23385928,23384916,23384442,23383225,23382428,23381990	23408277,23407608,23407236,23405770,23405379,23405127,23404822,23404388,23403778,23403446,23402800,23402602,23400977,23400426,23399037,23397613,23397257,23397080,23396817,23396420,23394323,23393908,23393518,23393057,23392652,23390446,23389719,23389511,23389055,23388338,23387923,23387653,23386623,23386131,23385041,23384717,23383320,23382562,23382063	Gene ID= ENSG00000197616.11 TPM= 496.56 Transcript Type= protein_coding
chr14	23412738	23435718	23412738	23435718	-	ENST00000355349.3@MYH7	ENST00000355349.3	protein_coding	23435620,23434194,23433532,23433084,23432639,23432479,23431761,23431585,23431418,23430901,23430560,23429775,23429229,23428955,23428500,23427585,23427240,23426777,23425964,23425695,23425282,23424769,23423907,23423547,23422180,23420958,23419845,23419483,23419177,23418210,23417503,23417153,23416868,23416004,23415629,23415381,23414995,23414007,23413759,23412738	23435718,23434249,23433740,23433227,23432795,23432506,23431869,23431677,23431481,23430999,23430663,23429913,23429347,23429104,23428670,23427894,23427307,23426864,23426081,23425818,23425418,23425024,23424149,23423723,23422325,23421048,23420234,23419609,23419295,23418406,23417686,23417318,23416992,23416312,23415832,23415506,23415270,23414102,23413893,23412871	Gene ID= ENSG00000092054.12 TPM= 6758.82 Transcript Type= protein_coding
chr14	23469688	23478193	23469688	23478193	+	ENST00000408901.7@NGDN	ENST00000408901.7	protein_coding	23469688,23470042,23470906,23475171,23475558,23475726,23476029,23476239,23477200,23477503,23478007	23469727,23470101,23470977,23475308,23475642,23475778,23476152,23476407,23477356,23477560,23478193	Gene ID= ENSG00000129460.15 TPM= 49.92 Transcript Type= protein_coding
chr14	23469689	23478178	23469689	23478178	+	transcript487.chr14.nic@NGDN	transcript487.chr14.nic	protein_coding	23469689,23470042,23470906,23475171,23475558,23475726,23476029,23476239,23477200,23478007	23469727,23470101,23470977,23475308,23475642,23475778,23476152,23476407,23477560,23478178	Gene ID= ENSG00000129460.15 TPM= 3.19 Transcript Type= NA
chr14	23556007	23559574	23556007	23559574	+	ENST00000404535.3@THTPA	ENST00000404535.3	protein_coding	23556007,23556743,23558695	23556343,23557304,23559574	Gene ID= ENSG00000259431.5 TPM= 6.37 Transcript Type= protein_coding
chr14	23556022	23560271	23556022	23560271	+	ENST00000288014.6@THTPA	ENST00000288014.6	protein_coding	23556022,23558695	23557304,23560271	Gene ID= ENSG00000259431.5 TPM= 1.06 Transcript Type= protein_coding
chr14	23559565	23568070	23559565	23568070	-	ENST00000308724.9@AP1G2	ENST00000308724.9	protein_coding	23567111,23566562,23566278,23566064,23565816,23565606,23565119,23564562,23564333,23564046,23563716,23563584,23563380,23562504,23562288,23561962,23561512,23561296,23560255,23559938,23559565	23568070,23566686,23566419,23566160,23565892,23565701,23565199,23564660,23564388,23564159,23563856,23563638,23563502,23562593,23562415,23562066,23561635,23561431,23560418,23560036,23559850	Gene ID= ENSG00000213983.11 TPM= 5.31 Transcript Type= protein_coding
chr14	23567336	23568076	23567336	23568076	+	transcript501.chr14.nnic@AL135999.1	transcript501.chr14.nnic	antisense_RNA	23567336,23567689,23567908	23567422,23567784,23568076	Gene ID= ENSG00000258727.1 TPM= 2.12 Transcript Type= NA
chr14	23561097	23568073	23561097	23568073	+	ENST00000555968.1@AL135999.1	ENST00000555968.1	antisense_RNA	23561097,23564727,23565456,23567689	23561873,23564840,23567422,23568073	Gene ID= ENSG00000258727.1 TPM= 1.06 Transcript Type= antisense_RNA
chr14	23938731	23954197	23938731	23954197	-	ENST00000556379.1@DHRS4-AS1	ENST00000556379.1	antisense_RNA	23953774,23938731	23954197,23941158	Gene ID= ENSG00000215256.3 TPM= 4.25 Transcript Type= antisense_RNA
chr14	23953586	23969274	23953586	23969274	+	ENST00000313250.9@DHRS4	ENST00000313250.9	protein_coding	23953586,23955035,23959902,23965762,23965932,23966283,23967211,23968757	23953916,23955212,23960003,23965832,23965983,23966417,23967266,23969274	Gene ID= ENSG00000157326.18 TPM= 34.7 Transcript Type= protein_coding
chr14	23953732	23969274	23953732	23969274	+	transcript517.chr14.nic@DHRS4	transcript517.chr14.nic	protein_coding	23953732,23955035,23959902,23965762,23966283,23967211,23968757	23953916,23955212,23960003,23965983,23966417,23967266,23969274	Gene ID= ENSG00000157326.18 TPM= 2.84 Transcript Type= NA
chr14	23953789	23969279	23953789	23969279	+	ENST00000558581.5@DHRS4	ENST00000558581.5	protein_coding	23953789,23955035,23965762,23965932,23966283,23967211,23968757	23953916,23955212,23965832,23965983,23966417,23967266,23969279	Gene ID= ENSG00000157326.18 TPM= 1.77 Transcript Type= protein_coding
chr14	23953732	24006401	23953732	24006401	+	transcript513.chr14.nnic@DHRS4L2	transcript513.chr14.nnic	protein_coding	23953732,23955035,23959902,24000863,24001033,24001384,24004337,24005886	23953916,23955212,23960003,24000933,24001084,24001517,24004392,24006401	Gene ID= ENSG00000187630.15 TPM= 4.78 Transcript Type= NA
chr14	23988818	24006408	23988818	24006408	+	ENST00000397071.5@DHRS4L2	ENST00000397071.5	protein_coding	23988818,23990182,23995032,24004337,24005886	23989075,23990359,23995133,24004392,24006408	Gene ID= ENSG00000187630.15 TPM= 12.21 Transcript Type= protein_coding
chr14	23956601	23958722	23956601	23958722	-	transcript531.chr14.nnic@NA	transcript531.chr14.nnic	NA	23956601	23958722	Gene ID= novel_gene_chr14_532 TPM= 8.5 Transcript Type= NA
chr14	24065753	24160655	24065753	24160655	+	transcript558.chr14.nnic@AL136295.5	transcript558.chr14.nnic	protein_coding	24065753,24155468,24155603,24157290,24157520,24157898,24158142,24159864,24160239,24160520	24065769,24155512,24155692,24157404,24157638,24158011,24158199,24159960,24160407,24160655	Gene ID= ENSG00000259529.1 TPM= 4.25 Transcript Type= NA
chr14	24071562	24078086	24071562	24078086	+	transcript538.chr14.nic@CPNE6	transcript538.chr14.nic	protein_coding	24071562,24072933,24073499,24074051,24074291,24074531,24074706,24075172,24075505,24075827,24076149,24076360,24076506,24076879,24077154,24077593,24077888	24071641,24073104,24073678,24074125,24074365,24074614,24074795,24075276,24075591,24075886,24076282,24076414,24076557,24077012,24077390,24077767,24078086	Gene ID= ENSG00000100884.9 TPM= 4.25 Transcript Type= NA
chr14	24080167	24115014	24080167	24115014	-	ENST00000561028.5@NRL	ENST00000561028.5	protein_coding	24114722,24082468,24080167	24115014,24082875,24081568	Gene ID= ENSG00000129535.12 TPM= 1.06 Transcript Type= protein_coding
chr14	24080839	24115004	24080839	24115004	-	transcript584.chr14.nnic@NRL	transcript584.chr14.nnic	protein_coding	24114722,24080839	24115004,24081568	Gene ID= ENSG00000129535.12 TPM= 3.19 Transcript Type= NA
chr14	24114805	24124029	24114805	24124029	+	transcript539.chr14.nic@DCAF11	transcript539.chr14.nic	protein_coding	24114805,24115206,24115382,24115543,24116917,24117266,24117668,24118055,24118388,24118750,24119145,24119559,24119711,24120838,24121365,24122971,24123175	24114924,24115293,24115392,24115749,24117044,24117393,24117732,24118155,24118534,24118804,24119213,24119616,24119896,24120991,24121517,24123077,24124029	Gene ID= ENSG00000100897.17 TPM= 11.38 Transcript Type= NA
chr14	24114777	24124029	24114777	24124029	+	transcript543.chr14.nic@DCAF11	transcript543.chr14.nic	protein_coding	24114777,24115543,24116917,24117266,24117668,24118055,24118388,24118750,24119145,24119559,24119711,24120838,24121365,24122971,24123175	24114924,24115726,24117044,24117393,24117732,24118155,24118534,24118804,24119213,24119616,24119896,24120991,24121517,24123077,24124029	Gene ID= ENSG00000100897.17 TPM= 3.94 Transcript Type= NA
chr14	24114771	24124029	24114771	24124029	+	transcript544.chr14.nic@DCAF11	transcript544.chr14.nic	protein_coding	24114771,24115543,24116972,24117266,24117668,24118055,24118388,24118750,24119145,24119559,24119711,24120838,24121365,24122971,24123175	24114924,24115726,24117044,24117393,24117732,24118155,24118534,24118804,24119213,24119616,24119896,24120991,24121517,24123077,24124029	Gene ID= ENSG00000100897.17 TPM= 3.94 Transcript Type= NA
chr14	24114780	24125240	24114780	24125240	+	ENST00000446197.7@DCAF11	ENST00000446197.7	protein_coding	24114780,24115382,24116917,24117266,24117668,24118055,24118388,24118750,24119145,24119559,24119711,24120838,24121365,24122971,24123175	24115293,24115749,24117044,24117393,24117732,24118155,24118534,24118804,24119213,24119616,24119896,24120991,24121517,24123077,24125240	Gene ID= ENSG00000100897.17 TPM= 16.99 Transcript Type= protein_coding
chr14	24115222	24124029	24115222	24124029	+	transcript549.chr14.nic@DCAF11	transcript549.chr14.nic	protein_coding	24115222,24115543,24116917,24117266,24117668,24118055,24118388,24118750,24119145,24119559,24119711,24120838,24121365,24122971,24123175	24115293,24115749,24117044,24117393,24117732,24118155,24118534,24118804,24119213,24119616,24119896,24120991,24121517,24123077,24124029	Gene ID= ENSG00000100897.17 TPM= 2.88 Transcript Type= NA
chr14	24115277	24124029	24115277	24124029	+	transcript550.chr14.nic@DCAF11	transcript550.chr14.nic	protein_coding	24115277,24115543,24116917,24117266,24117668,24118055,24118388,24118750,24119145,24119559,24119711,24120838,24121365,24122971,24123175	24115392,24115749,24117044,24117393,24117732,24118155,24118534,24118804,24119213,24119616,24119896,24120991,24121517,24123077,24124029	Gene ID= ENSG00000100897.17 TPM= 3.94 Transcript Type= NA
chr14	24114627	24124029	24114627	24124029	+	ENST00000559115.5@DCAF11	ENST00000559115.5	protein_coding	24114627,24115543,24116917,24117266,24117668,24118055,24118388,24118750,24119145,24119559,24119711,24120838,24121365,24122971,24123175	24114924,24115749,24117044,24117393,24117732,24118155,24118534,24118804,24119213,24119616,24119896,24120991,24121517,24123077,24124029	Gene ID= ENSG00000100897.17 TPM= 26.25 Transcript Type= protein_coding
chr14	24115275	24124029	24115275	24124029	+	ENST00000326009.9@DCAF11	ENST00000326009.9	protein_coding	24115275,24115382,24116917,24117266,24117668,24118055,24118388,24118750,24119145,24119559,24119711,24120838,24121365,24122971,24123175	24115293,24115726,24117044,24117393,24117732,24118155,24118534,24118804,24119213,24119616,24119896,24120991,24121517,24123077,24124029	Gene ID= ENSG00000100897.17 TPM= 16.69 Transcript Type= nonsense_mediated_decay
chr14	24131209	24132847	24131209	24132847	+	transcript585.chr14.nnic@NA	transcript585.chr14.nnic	NA	24131209	24132847	Gene ID= novel_gene_chr14_586 TPM= 7.97 Transcript Type= NA
chr14	24131275	24132849	24131275	24132849	+	ENST00000267426.5@FITM1	ENST00000267426.5	protein_coding	24131275,24132211	24131829,24132849	Gene ID= ENSG00000139914.6 TPM= 211.9 Transcript Type= protein_coding
chr14	24136158	24138967	24136158	24138967	+	ENST00000206451.10@PSME1	ENST00000206451.10	protein_coding	24136158,24136985,24137143,24137321,24137520,24137700,24138049,24138196,24138345,24138474,24138736	24136301,24137017,24137205,24137431,24137565,24137797,24138117,24138263,24138399,24138560,24138967	Gene ID= ENSG00000092010.14 TPM= 218.81 Transcript Type= protein_coding
chr14	24136227	24138967	24136227	24138967	+	ENST00000561435.5@PSME1	ENST00000561435.5	protein_coding	24136227,24136985,24137143,24137321,24137520,24137700,24138049,24138196,24138345,24138474,24138736	24136301,24137017,24137205,24137431,24137565,24137797,24138117,24138263,24138399,24138568,24138967	Gene ID= ENSG00000092010.14 TPM= 4.25 Transcript Type= protein_coding
chr14	24138965	24141588	24138965	24141588	-	ENST00000216799.8@EMC9	ENST00000216799.8	protein_coding	24141438,24141107,24140889,24139545,24139360,24138965	24141588,24141316,24140965,24139614,24139454,24139196	Gene ID= ENSG00000100908.13 TPM= 9.56 Transcript Type= protein_coding
chr14	24138965	24141570	24138965	24141570	-	ENST00000560403.5@EMC9	ENST00000560403.5	protein_coding	24141348,24140889,24139545,24139360,24138965	24141570,24140965,24139789,24139454,24139196	Gene ID= ENSG00000100908.13 TPM= 1.06 Transcript Type= protein_coding
chr14	24138965	24141585	24138965	24141585	-	ENST00000419198.6@EMC9	ENST00000419198.6	protein_coding	24141107,24140889,24139545,24139360,24138965	24141585,24140965,24139614,24139454,24139196	Gene ID= ENSG00000100908.13 TPM= 7.44 Transcript Type= protein_coding
chr14	24143365	24147221	24143365	24147221	-	ENST00000216802.9@PSME2	ENST00000216802.9	protein_coding	24146534,24146208,24145710,24145379,24145243,24145058,24144400,24144192,24143975,24143585,24143365	24147221,24146240,24145772,24145465,24145273,24145155,24144468,24144259,24144029,24143671,24143489	Gene ID= ENSG00000100911.15 TPM= 56.29 Transcript Type= protein_coding
chr14	24143382	24146238	24143382	24146238	-	ENST00000559453.5@PSME2	ENST00000559453.5	protein_coding	24145710,24145379,24145243,24144400,24144192,24143975,24143585,24143382	24146238,24145465,24145273,24145155,24144259,24144029,24143671,24143489	Gene ID= ENSG00000100911.15 TPM= 1.06 Transcript Type= retained_intron
chr14	24147379	24160661	24147379	24160661	+	ENST00000324103.10@RNF31	ENST00000324103.10	protein_coding	24147379,24147976,24148258,24148642,24148801,24149406,24150061,24150598,24151131,24151485,24151786,24155157,24155414,24155603,24157290,24157520,24157898,24158142,24159864,24160239,24160520	24147890,24148122,24148413,24148701,24148876,24149583,24150448,24150888,24151379,24151670,24151992,24155330,24155512,24155692,24157404,24157638,24158011,24158199,24159960,24160407,24160661	Gene ID= ENSG00000092098.16 TPM= 30.8 Transcript Type= protein_coding
chr14	24161253	24166565	24161253	24166565	+	transcript597.chr14.nic@IRF9	transcript597.chr14.nic	protein_coding	24161253,24162144,24162966,24163378,24163878,24164063,24164614,24165057,24165847,24166122	24161338,24162324,24163149,24163508,24163959,24164134,24164955,24165183,24165962,24166565	Gene ID= ENSG00000213928.8 TPM= 6.9 Transcript Type= NA
chr14	24161053	24166565	24161053	24166565	+	ENST00000396864.7@IRF9	ENST00000396864.7	protein_coding	24161053,24162144,24162966,24163378,24163878,24164063,24164614,24165847,24166122	24161338,24162324,24163149,24163508,24163959,24164134,24164955,24165962,24166565	Gene ID= ENSG00000213928.8 TPM= 24.96 Transcript Type= protein_coding
chr14	24165759	24166565	24165759	24166565	+	ENST00000560311.1@IRF9	ENST00000560311.1	protein_coding	24165759,24166122	24165962,24166565	Gene ID= ENSG00000213928.8 TPM= 2.12 Transcript Type= retained_intron
chr14	24171853	24180257	24171853	24180257	+	ENST00000620473.4@REC8	ENST00000620473.4	protein_coding	24171853,24172467,24172713,24172899,24173126,24173291,24175543,24176822,24177141,24177353,24177465,24177709,24178091,24178606,24178777,24179085,24179397,24179595,24179800,24180010	24172365,24172608,24172781,24173041,24173198,24173411,24175624,24176901,24177222,24177383,24177541,24177758,24178222,24178672,24178916,24179133,24179463,24179726,24179906,24180257	Gene ID= ENSG00000100918.12 TPM= 2.12 Transcript Type= protein_coding
chr14	24172025	24180254	24172025	24180254	+	ENST00000611366.4@REC8	ENST00000611366.4	protein_coding	24172025,24172713,24172899,24173126,24173291,24175543,24176822,24177141,24177353,24177465,24177709,24178091,24178606,24178777,24179085,24179397,24179595,24179800,24180010	24172608,24172781,24173041,24173198,24173411,24175624,24176901,24177222,24177383,24177541,24177758,24178222,24178672,24178916,24179133,24179463,24179726,24179906,24180254	Gene ID= ENSG00000100918.12 TPM= 1.06 Transcript Type= protein_coding
chr14	24180219	24188964	24180219	24188964	-	ENST00000354464.10@IPO4	ENST00000354464.10	protein_coding	24188719,24188552,24188344,24188216,24187667,24187400,24187085,24186878,24186708,24186287,24186129,24185861,24185459,24185183,24184867,24184650,24184298,24183998,24183783,24183590,24183456,24183250,24182976,24182792,24182278,24181955,24181711,24181513,24180689,24180219	24188964,24188638,24188423,24188257,24187796,24187579,24187150,24186979,24186791,24186451,24186182,24185970,24185567,24185312,24184980,24184763,24184418,24184109,24183898,24183667,24183513,24183355,24183169,24182842,24182403,24182163,24181843,24181617,24180758,24180572	Gene ID= ENSG00000196497.16 TPM= 13.81 Transcript Type= protein_coding
chr14	24189143	24195687	24189143	24195687	-	ENST00000261789.8@TM9SF1	ENST00000261789.8	protein_coding	24195346,24194675,24192648,24192171,24190380,24189143	24195687,24195036,24193269,24192356,24190653,24189808	Gene ID= ENSG00000100926.14 TPM= 46.2 Transcript Type= protein_coding
chr14	24192713	24195486	24192713	24195486	-	transcript628.chr14.nic@TM9SF1	transcript628.chr14.nic	protein_coding	24195346,24194675,24192713	24195486,24195036,24193269	Gene ID= ENSG00000100926.14 TPM= 4.25 Transcript Type= NA
chr14	24190042	24195618	24190042	24195618	-	ENST00000396854.8@TM9SF1	ENST00000396854.8	protein_coding	24195346,24194675,24192648,24192171,24190042	24195618,24195036,24193269,24192356,24190653	Gene ID= ENSG00000100926.14 TPM= 2.66 Transcript Type= protein_coding
chr14	24189149	24190668	24189149	24190668	-	transcript639.chr14.nnic@NA	transcript639.chr14.nnic	NA	24189149	24190668	Gene ID= novel_gene_chr14_640 TPM= 4.25 Transcript Type= NA
chr14	24189157	24213473	24189157	24213473	-	ENST00000530611.1@AL136295.1	ENST00000530611.1	protein_coding	24213409,24211680,24211415,24210654,24210348,24194675,24192648,24192171,24190380,24189157	24213473,24211829,24211592,24210768,24210483,24195036,24193269,24192356,24190653,24189808	Gene ID= ENSG00000254692.1 TPM= 2.12 Transcript Type= protein_coding
chr14	24201734	24204065	24201734	24204065	+	transcript635.chr14.nnic@NA	transcript635.chr14.nnic	NA	24201734	24204065	Gene ID= novel_gene_chr14_636 TPM= 3.19 Transcript Type= NA
chr14	24209583	24213869	24209583	24213869	-	ENST00000347519.10@CHMP4A	ENST00000347519.10	protein_coding	24213409,24211680,24211415,24210654,24210348,24209583	24213869,24211829,24211592,24210768,24210483,24209935	Gene ID= ENSG00000254505.9 TPM= 110.46 Transcript Type= protein_coding
chr14	24209860	24213488	24209860	24213488	-	ENST00000609024.5@CHMP4A	ENST00000609024.5	protein_coding	24213409,24211680,24211415,24210654,24210348,24209860	24213488,24211829,24211592,24210768,24210483,24209935	Gene ID= ENSG00000254505.9 TPM= 10.62 Transcript Type= protein_coding
chr14	24209624	24213497	24209624	24213497	-	transcript625.chr14.nnic@AL096870.2	transcript625.chr14.nnic	processed_transcript	24213409,24210654,24210348,24209624	24213497,24210768,24210483,24209935	Gene ID= ENSG00000260669.2 TPM= 3.19 Transcript Type= NA
chr14	24213954	24216075	24213954	24216075	-	transcript616.chr14.nic@MDP1	transcript616.chr14.nic	protein_coding	24215919,24215737,24215552,24214492,24214262,24213954	24216075,24215797,24215662,24214599,24214395,24214151	Gene ID= ENSG00000213920.8 TPM= 3.19 Transcript Type= NA
chr14	24213943	24216065	24213943	24216065	-	ENST00000396833.2@MDP1	ENST00000396833.2	protein_coding	24215919,24215737,24215552,24214546,24213943	24216065,24215797,24215662,24214599,24214151	Gene ID= ENSG00000213920.8 TPM= 2.66 Transcript Type= protein_coding
chr14	24213937	24216067	24213937	24216067	-	ENST00000288087.11@MDP1	ENST00000288087.11	protein_coding	24215919,24215737,24215552,24214492,24214310,24213937	24216067,24215797,24215662,24214599,24214395,24214151	Gene ID= ENSG00000213920.8 TPM= 10.09 Transcript Type= protein_coding
chr14	24226605	24232355	24226605	24232355	-	ENST00000533242.1@NEDD8	ENST00000533242.1	protein_coding	24232250,24231652,24226605	24232355,24231737,24228712	Gene ID= ENSG00000129559.12 TPM= 1.06 Transcript Type= processed_transcript
chr14	24216866	24232325	24216866	24232325	-	ENST00000531430.5@NEDD8	ENST00000531430.5	protein_coding	24232250,24231652,24218384,24218133,24216866	24232325,24231737,24218431,24218215,24217223	Gene ID= ENSG00000129559.12 TPM= 11.15 Transcript Type= processed_transcript
chr14	24216857	24232303	24216857	24232303	-	ENST00000396828.8@NEDD8	ENST00000396828.8	protein_coding	24232250,24218384,24218059,24216857	24232303,24218431,24218215,24217223	Gene ID= ENSG00000129559.12 TPM= 5.84 Transcript Type= nonsense_mediated_decay
chr14	24232458	24239239	24232458	24239239	+	transcript641.chr14.nic@GMPR2	transcript641.chr14.nic	protein_coding	24232458,24233219,24233479,24234107,24235737,24235967,24237071,24237245,24237520,24238246,24238589	24232788,24233340,24233598,24234241,24235820,24236140,24237152,24237351,24237562,24238405,24239239	Gene ID= ENSG00000100938.17 TPM= 3.61 Transcript Type= NA
chr14	24232442	24239242	24232442	24239242	+	ENST00000559836.5@GMPR2	ENST00000559836.5	protein_coding	24232442,24233219,24233479,24235737,24235967,24237071,24237245,24237520,24238246,24238589	24232788,24233340,24233598,24235820,24236140,24237152,24237351,24237562,24238405,24239242	Gene ID= ENSG00000100938.17 TPM= 10.52 Transcript Type= protein_coding
chr14	24232422	24239242	24232422	24239242	+	ENST00000355299.8@GMPR2	ENST00000355299.8	protein_coding	24232422,24233219,24233479,24235737,24235967,24237071,24237245,24237520,24238246,24238589	24232847,24233340,24233598,24235820,24236140,24237152,24237351,24237562,24238405,24239242	Gene ID= ENSG00000100938.17 TPM= 5.2 Transcript Type= protein_coding
chr14	24232872	24239242	24232872	24239242	+	ENST00000399440.6@GMPR2	ENST00000399440.6	protein_coding	24232872,24233219,24233479,24235737,24235967,24237071,24237245,24237520,24238246,24238589	24232977,24233340,24233598,24235820,24236140,24237152,24237351,24237562,24238405,24239242	Gene ID= ENSG00000100938.17 TPM= 4.14 Transcript Type= protein_coding
chr14	24232901	24239242	24232901	24239242	+	ENST00000420554.6@GMPR2	ENST00000420554.6	protein_coding	24232901,24233479,24235737,24235967,24237071,24237245,24237520,24238246,24238589	24233340,24233598,24235820,24236140,24237152,24237351,24237562,24238405,24239242	Gene ID= ENSG00000100938.17 TPM= 5.2 Transcript Type= protein_coding
chr14	24239643	24242674	24239643	24242674	-	ENST00000267415.11@TINF2	ENST00000267415.11	protein_coding	24242141,24241890,24241675,24241204,24241020,24240419,24240263,24240064,24239643	24242674,24241994,24241776,24241311,24241116,24240875,24240330,24240155,24239931	Gene ID= ENSG00000092330.15 TPM= 9.98 Transcript Type= protein_coding
chr14	24239643	24242612	24239643	24242612	-	transcript655.chr14.nic@TINF2	transcript655.chr14.nic	protein_coding	24242141,24241890,24241675,24241204,24241020,24240419,24240263,24239643	24242612,24241994,24241776,24241311,24241116,24240875,24240330,24240155	Gene ID= ENSG00000092330.15 TPM= 5.2 Transcript Type= NA
chr14	24239643	24242612	24239643	24242612	-	transcript657.chr14.nic@TINF2	transcript657.chr14.nic	protein_coding	24242141,24241890,24241675,24241204,24241020,24240263,24239643	24242612,24241994,24241776,24241311,24241116,24240875,24240155	Gene ID= ENSG00000092330.15 TPM= 3.08 Transcript Type= NA
chr14	24239643	24242663	24239643	24242663	-	ENST00000399423.8@TINF2	ENST00000399423.8	protein_coding	24242141,24241890,24241675,24241204,24241020,24239643	24242663,24241994,24241776,24241311,24241116,24240875	Gene ID= ENSG00000092330.15 TPM= 52.47 Transcript Type= protein_coding
chr14	24239643	24242635	24239643	24242635	-	transcript662.chr14.nic@TINF2	transcript662.chr14.nic	protein_coding	24242141,24241675,24241204,24241020,24239643	24242635,24241776,24241311,24241116,24240875	Gene ID= ENSG00000092330.15 TPM= 12.11 Transcript Type= NA
chr14	24239682	24242635	24239682	24242635	-	transcript670.chr14.nic@TINF2	transcript670.chr14.nic	protein_coding	24242141,24241675,24239682	24242635,24241776,24240875	Gene ID= ENSG00000092330.15 TPM= 3.19 Transcript Type= NA
chr14	24265538	24271739	24265538	24271739	-	ENST00000216840.10@RABGGTA	ENST00000216840.10	protein_coding	24271487,24271113,24270837,24270334,24269953,24269491,24269080,24268911,24268725,24268514,24268369,24268110,24267870,24267660,24266776,24266430,24265538	24271739,24271169,24270947,24270458,24270140,24269694,24269163,24268993,24268826,24268619,24268420,24268198,24267958,24267776,24266889,24266517,24265763	Gene ID= ENSG00000100949.14 TPM= 19.73 Transcript Type= protein_coding
chr14	24265538	24271534	24265538	24271534	-	transcript674.chr14.nic@RABGGTA	transcript674.chr14.nic	protein_coding	24271487,24271113,24270837,24270334,24269953,24269491,24269080,24268911,24268725,24268514,24268369,24268110,24267870,24267660,24266776,24266430,24265538	24271534,24271248,24270947,24270458,24270140,24269694,24269163,24268993,24268826,24268619,24268420,24268198,24267958,24267776,24266889,24266517,24265763	Gene ID= ENSG00000100949.14 TPM= 4.86 Transcript Type= NA
chr14	24265538	24271599	24265538	24271599	-	ENST00000399409.7@RABGGTA	ENST00000399409.7	protein_coding	24271113,24270837,24270334,24269953,24269491,24269080,24268911,24268725,24268514,24268369,24268110,24267870,24267660,24266776,24266430,24265538	24271599,24270947,24270458,24270140,24269694,24269163,24268993,24268826,24268619,24268420,24268198,24267958,24267776,24266889,24266517,24265763	Gene ID= ENSG00000100949.14 TPM= 4.86 Transcript Type= protein_coding
chr14	24265556	24271549	24265556	24271549	-	ENST00000559974.5@RABGGTA	ENST00000559974.5	protein_coding	24271487,24271113,24270837,24270334,24269953,24269491,24269080,24268911,24268725,24268514,24268369,24268110,24267866,24267660,24266776,24266430,24265556	24271549,24271248,24270947,24270458,24270140,24269694,24269163,24268993,24268826,24268619,24268420,24268198,24267958,24267776,24266889,24266517,24265763	Gene ID= ENSG00000100949.14 TPM= 2.39 Transcript Type= nonsense_mediated_decay
chr14	24271216	24298785	24271216	24298785	+	transcript685.chr14.nnic@NA	transcript685.chr14.nnic	NA	24271216,24292198,24292437,24298614	24271310,24292352,24292600,24298785	Gene ID= novel_gene_chr14_686 TPM= 2.12 Transcript Type= NA
chr14	24290598	24299833	24290598	24299833	-	ENST00000288111.11@DHRS1	ENST00000288111.11	protein_coding	24299581,24298957,24296738,24296509,24292652,24292184,24291556,24291139,24290598	24299833,24299130,24296881,24296588,24292784,24292330,24291625,24291219,24290995	Gene ID= ENSG00000157379.13 TPM= 18.06 Transcript Type= protein_coding
chr14	24290636	24299761	24290636	24299761	-	ENST00000561273.5@DHRS1	ENST00000561273.5	protein_coding	24299581,24298957,24296738,24296509,24292184,24291139,24290636	24299761,24299130,24296881,24296588,24292784,24291625,24290995	Gene ID= ENSG00000157379.13 TPM= 3.19 Transcript Type= retained_intron
chr14	24305187	24311422	24305187	24311422	-	ENST00000258807.5@CIDEB	ENST00000258807.5	protein_coding	24310649,24308479,24307818,24307371,24306374,24305947,24305187	24311422,24308830,24307920,24307515,24306523,24306137,24305765	Gene ID= ENSG00000136305.11 TPM= 2.12 Transcript Type= protein_coding
chr14	24305421	24308172	24305421	24308172	+	transcript692.chr14.nnic@NA	transcript692.chr14.nnic	NA	24305421	24308172	Gene ID= novel_gene_chr14_693 TPM= 10.62 Transcript Type= NA
chr14	24318364	24330752	24318364	24330752	-	transcript704.chr14.nic@ADCY4	transcript704.chr14.nic	protein_coding	24329860,24329401,24329061,24326299,24326079,24325818,24325377,24324307,24324062,24323344,24322904,24322624,24322066,24319742,24319329,24319098,24318654,24318364	24330752,24329533,24329234,24326342,24326165,24325887,24325474,24324391,24324199,24323454,24323088,24322708,24322224,24319888,24319436,24319212,24318778,24318568	Gene ID= ENSG00000129467.13 TPM= 10.62 Transcript Type= NA
chr14	24332238	24335093	24332238	24335093	-	ENST00000557099.2@ADCY4	ENST00000557099.2	protein_coding	24334494,24332238	24335093,24332988	Gene ID= ENSG00000129467.13 TPM= 6.37 Transcript Type= retained_intron
chr14	24333389	24335076	24333389	24335076	-	transcript714.chr14.nnic@NA	transcript714.chr14.nnic	NA	24333389	24335076	Gene ID= novel_gene_chr14_715 TPM= 2.12 Transcript Type= NA
chr14	24336021	24340045	24336021	24340045	-	ENST00000216274.9@RIPK3	ENST00000216274.9	protein_coding	24339807,24339457,24339015,24338422,24338249,24337873,24337695,24337086,24336885,24336021	24340045,24339597,24339324,24338567,24338295,24338040,24337762,24337460,24336945,24336395	Gene ID= ENSG00000129465.15 TPM= 2.12 Transcript Type= protein_coding
chr14	24429938	24438408	24429938	24438408	+	ENST00000553935.5@KHNYN	ENST00000553935.5	protein_coding	24429938,24430714,24431463,24432722,24432936,24436072,24436388,24437036	24430119,24430931,24432610,24432852,24433032,24436179,24436489,24438408	Gene ID= ENSG00000100441.9 TPM= 5.31 Transcript Type= protein_coding
chr14	24430258	24441339	24430258	24441339	+	transcript724.chr14.nic@KHNYN	transcript724.chr14.nic	protein_coding	24430258,24431463,24432722,24432936,24436072,24436388,24437036	24430931,24432610,24432852,24433032,24436179,24436489,24441339	Gene ID= ENSG00000100441.9 TPM= 21.24 Transcript Type= NA
chr14	24439766	24442813	24439766	24442813	-	transcript725.chr14.nic@SDR39U1	transcript725.chr14.nic	protein_coding	24442754,24442346,24442098,24441674,24440783,24439766	24442813,24442452,24442260,24441795,24440926,24440492	Gene ID= ENSG00000100445.17 TPM= 10.65 Transcript Type= NA
chr14	24439766	24442843	24439766	24442843	-	transcript728.chr14.nic@SDR39U1	transcript728.chr14.nic	protein_coding	24442818,24442346,24442178,24441674,24440783,24439766	24442843,24442452,24442260,24441795,24440926,24440492	Gene ID= ENSG00000100445.17 TPM= 13.14 Transcript Type= NA
chr14	24439766	24442776	24439766	24442776	-	ENST00000544691.6@SDR39U1	ENST00000544691.6	protein_coding	24442346,24442178,24441674,24440783,24439766	24442776,24442260,24441795,24440926,24440492	Gene ID= ENSG00000100445.17 TPM= 13.14 Transcript Type= retained_intron
chr14	24439766	24442813	24439766	24442813	-	transcript735.chr14.nic@SDR39U1	transcript735.chr14.nic	protein_coding	24442754,24442346,24442178,24440783,24439766	24442813,24442452,24442260,24440926,24440492	Gene ID= ENSG00000100445.17 TPM= 11.5 Transcript Type= NA
chr14	24439766	24442711	24439766	24442711	-	transcript737.chr14.nic@SDR39U1	transcript737.chr14.nic	protein_coding	24442098,24441674,24440783,24439766	24442711,24441795,24440926,24440492	Gene ID= ENSG00000100445.17 TPM= 10.65 Transcript Type= NA
chr14	24439766	24442803	24439766	24442803	-	ENST00000399395.7@SDR39U1	ENST00000399395.7	protein_coding	24442754,24442346,24442178,24441674,24440783,24439766	24442803,24442452,24442260,24441795,24440926,24440492	Gene ID= ENSG00000100445.17 TPM= 33.32 Transcript Type= protein_coding
chr14	24439780	24442776	24439780	24442776	-	ENST00000556262.5@SDR39U1	ENST00000556262.5	protein_coding	24441674,24440783,24439780	24442776,24440926,24440492	Gene ID= ENSG00000100445.17 TPM= 2.12 Transcript Type= retained_intron
chr14	24573556	24576260	24573556	24576260	-	ENST00000216336.2@CTSG	ENST00000216336.2	protein_coding	24576169,24575265,24574675,24574245,24573556	24576260,24575412,24574810,24574499,24573810	Gene ID= ENSG00000100448.3 TPM= 2.12 Transcript Type= protein_coding
chr14	24812492	25050162	24812492	25050162	-	transcript748.chr14.nic@STXBP6	transcript748.chr14.nic	protein_coding	25049878,24987886,24974665,24857027,24855936,24819037,24812492	25050162,24987972,24974850,24857157,24856101,24819194,24812732	Gene ID= ENSG00000168952.15 TPM= 6.37 Transcript Type= NA
chr14	24809662	25050297	24809662	25050297	-	ENST00000323944.9@STXBP6	ENST00000323944.9	protein_coding	25049878,24974665,24857027,24855936,24819037,24809662	25050297,24974850,24857157,24856101,24819194,24812732	Gene ID= ENSG00000168952.15 TPM= 2.12 Transcript Type= protein_coding
chr14	24973380	25050170	24973380	25050170	-	transcript754.chr14.nic@STXBP6	transcript754.chr14.nic	protein_coding	25049878,24973380	25050170,24974850	Gene ID= ENSG00000168952.15 TPM= 3.19 Transcript Type= NA
chr14	29576479	29927512	29576479	29927512	-	ENST00000616995.4@PRKD1	ENST00000616995.4	protein_coding	29927257,29751166,29725536,29666077,29663699,29638694,29638489,29636290,29634418,29632869,29630742,29629041,29626484,29624152,29599656,29599027,29597491,29578275,29576479	29927512,29751173,29725674,29666208,29663859,29638904,29638566,29636494,29634541,29632946,29631021,29629093,29626556,29624258,29599817,29599125,29597758,29578360,29577456	Gene ID= ENSG00000184304.14 TPM= 3.19 Transcript Type= protein_coding
chr14	30559123	30620063	30559123	30620063	+	ENST00000206595.10@G2E3	ENST00000206595.10	protein_coding	30559123,30581076,30586718,30589383,30592323,30593474,30597420,30598483,30601770,30601999,30605505,30607888,30612207,30615349,30616278	30559272,30581116,30586815,30589484,30592447,30593639,30597526,30598599,30601894,30602131,30605812,30608069,30612379,30615539,30620063	Gene ID= ENSG00000092140.14 TPM= 1.06 Transcript Type= protein_coding
chr14	30622112	30735812	30622112	30735812	+	ENST00000458591.6@SCFD1	ENST00000458591.6	protein_coding	30622112,30628209,30630477,30633947,30638125,30639777,30643316,30649528,30650565,30653489,30670256,30673257,30673924,30674984,30694773,30700188,30702296,30705823,30707990,30715924,30719325,30721884,30722494,30734790,30735586	30622399,30628279,30630565,30634037,30638247,30639864,30643405,30649583,30650650,30653588,30670395,30673347,30673997,30675065,30694869,30700258,30702375,30705885,30708065,30715977,30719377,30721917,30722559,30734858,30735812	Gene ID= ENSG00000092108.20 TPM= 22.31 Transcript Type= protein_coding
chr14	30622319	30735789	30622319	30735789	+	ENST00000544052.6@SCFD1	ENST00000544052.6	protein_coding	30622319,30630477,30633947,30638125,30639777,30643316,30649528,30650565,30653489,30670256,30673257,30673924,30674984,30694773,30700188,30702296,30705823,30707990,30715924,30719325,30721884,30722494,30734790,30735586	30622399,30630565,30634037,30638247,30639864,30643405,30649583,30650650,30653588,30670395,30673347,30673997,30675065,30694869,30700258,30702375,30705885,30708065,30715977,30719377,30721917,30722559,30734858,30735789	Gene ID= ENSG00000092108.20 TPM= 5.31 Transcript Type= protein_coding
chr14	30874559	30890618	30874559	30890618	+	ENST00000396618.7@COCH	ENST00000396618.7	protein_coding	30874559,30874916,30875056,30877572,30878811,30879423,30880452,30880587,30884553,30885394,30885796,30889616	30874591,30874972,30875103,30877728,30878944,30879485,30880496,30880734,30884656,30885620,30886312,30890618	Gene ID= ENSG00000100473.15 TPM= 1.06 Transcript Type= protein_coding
chr14	30893799	31026422	30893799	31026422	-	transcript775.chr14.nic@STRN3	transcript775.chr14.nic	protein_coding	31025904,30956139,30955620,30950863,30947090,30936495,30935163,30918966,30913524,30912007,30911777,30911041,30906877,30905418,30902536,30895662,30893799	31026422,30956242,30955693,30950944,30947263,30936624,30935304,30919106,30913657,30912182,30911824,30911162,30907044,30905558,30902643,30895748,30895580	Gene ID= ENSG00000196792.11 TPM= 3.19 Transcript Type= NA
chr14	30893799	31026401	30893799	31026401	-	ENST00000355683.9@STRN3	ENST00000355683.9	protein_coding	31025904,30956139,30955620,30950863,30947090,30936495,30935163,30913524,30912007,30911777,30911041,30906877,30905418,30902536,30895662,30893799	31026401,30956242,30955693,30950944,30947263,30936624,30935304,30913657,30912182,30911824,30911162,30907044,30905558,30902643,30895748,30895580	Gene ID= ENSG00000196792.11 TPM= 43.55 Transcript Type= protein_coding
chr14	31004036	31006134	31004036	31006134	+	transcript787.chr14.nnic@NA	transcript787.chr14.nnic	NA	31004036	31006134	Gene ID= novel_gene_chr14_788 TPM= 3.19 Transcript Type= NA
chr14	31025673	31093432	31025673	31093432	+	transcript784.chr14.nic@AP4S1	transcript784.chr14.nic	protein_coding	31025673,31032971,31066126,31069843,31072905,31080573,31092907	31025787,31033006,31066334,31069929,31072973,31080584,31093432	Gene ID= ENSG00000100478.14 TPM= 2.12 Transcript Type= NA
chr14	31025466	31096450	31025466	31096450	+	ENST00000542754.6@AP4S1	ENST00000542754.6	protein_coding	31025466,31066126,31069843,31072905,31080573,31092907	31025787,31066334,31069929,31072973,31080584,31096450	Gene ID= ENSG00000100478.14 TPM= 2.12 Transcript Type= protein_coding
chr14	31168430	31208151	31168430	31208151	-	transcript794.chr14.nic@HECTD1	transcript794.chr14.nic	protein_coding	31207016,31205797,31178020,31174911,31173525,31173156,31172046,31171861,31169354,31168430	31208151,31205957,31178254,31175138,31173806,31173426,31172122,31171959,31169468,31168472	Gene ID= ENSG00000092148.12 TPM= 24.25 Transcript Type= NA
chr14	31168430	31207811	31168430	31207811	-	transcript795.chr14.nic@HECTD1	transcript795.chr14.nic	protein_coding	31207391,31205797,31178020,31174911,31173525,31173156,31172046,31171861,31169354,31168430	31207811,31205957,31178254,31175138,31173806,31173426,31172122,31171959,31169468,31168472	Gene ID= ENSG00000092148.12 TPM= 10.09 Transcript Type= NA
chr14	31172954	31207805	31172954	31207805	-	transcript798.chr14.nic@HECTD1	transcript798.chr14.nic	protein_coding	31207016,31205797,31178020,31174911,31173525,31172954	31207805,31205957,31178254,31175138,31173806,31173426	Gene ID= ENSG00000092148.12 TPM= 2.47 Transcript Type= NA
chr14	31177906	31207919	31177906	31207919	-	transcript799.chr14.nic@HECTD1	transcript799.chr14.nic	protein_coding	31207016,31205797,31177906	31207919,31205957,31178254	Gene ID= ENSG00000092148.12 TPM= 6.37 Transcript Type= NA
chr14	31400266	31420531	31400266	31420531	-	ENST00000382464.6@HEATR5A	ENST00000382464.6	protein_coding	31420472,31402850,31400266	31420531,31403049,31400512	Gene ID= ENSG00000129493.14 TPM= 1.06 Transcript Type= protein_coding
chr14	31343585	31343739	31343585	31343739	-	transcript806.chr14.nnic@NA	transcript806.chr14.nnic	NA	31343585	31343739	Gene ID= novel_gene_chr14_807 TPM= 2.12 Transcript Type= NA
chr14	31420944	31439945	31420944	31439945	+	ENST00000550431.1@AL139353.2	ENST00000550431.1	antisense_RNA	31420944,31421848,31439672	31420977,31421968,31439945	Gene ID= ENSG00000250365.6 TPM= 1.06 Transcript Type= antisense_RNA
chr14	31561395	31861224	31561395	31861224	+	ENST00000281081.11@NUBPL	ENST00000281081.11	protein_coding	31561395,31562068,31565014,31599289,31673355,31673484,31787780,31826629,31846471,31850119,31859118	31561547,31562215,31565048,31599379,31673394,31673574,31787873,31826714,31846591,31850201,31861224	Gene ID= ENSG00000151413.16 TPM= 21.24 Transcript Type= protein_coding
chr14	31577942	31860302	31577942	31860302	+	transcript817.chr14.nnic@NUBPL	transcript817.chr14.nnic	protein_coding	31577942,31599289,31673355,31673484,31787780,31826629,31846471,31850119,31859118	31578025,31599379,31673394,31673574,31787873,31826714,31846591,31850201,31860302	Gene ID= ENSG00000151413.16 TPM= 3.19 Transcript Type= NA
chr14	32075423	32076822	32075423	32076822	-	transcript836.chr14.nnic@NA	transcript836.chr14.nnic	NA	32075423	32076822	Gene ID= novel_gene_chr14_837 TPM= 5.31 Transcript Type= NA
chr14	32077289	32159728	32077289	32159728	+	ENST00000345122.7@ARHGAP5	ENST00000345122.7	protein_coding	32077289,32090502,32117140,32146263,32149902,32152423,32154621	32077435,32094386,32117287,32146340,32150033,32152528,32159728	Gene ID= ENSG00000100852.12 TPM= 4.25 Transcript Type= protein_coding
chr14	32076962	32091669	32076962	32091669	+	transcript829.chr14.nic@ARHGAP5	transcript829.chr14.nic	protein_coding	32076962,32090502	32077053,32091669	Gene ID= ENSG00000100852.12 TPM= 2.12 Transcript Type= NA
chr14	32076962	32094363	32076962	32094363	+	transcript830.chr14.nic@ARHGAP5	transcript830.chr14.nic	protein_coding	32076962,32090502	32077053,32094363	Gene ID= ENSG00000100852.12 TPM= 4.78 Transcript Type= NA
chr14	32077284	32094369	32077284	32094369	+	transcript831.chr14.nic@ARHGAP5	transcript831.chr14.nic	protein_coding	32077284,32090502	32077435,32094369	Gene ID= ENSG00000100852.12 TPM= 7.97 Transcript Type= NA
chr14	32130389	32131771	32130389	32131771	-	transcript838.chr14.nnic@NA	transcript838.chr14.nnic	NA	32130389	32131771	Gene ID= novel_gene_chr14_839 TPM= 2.12 Transcript Type= NA
chr14	32214336	32217913	32214336	32217913	-	transcript873.chr14.nnic@NA	transcript873.chr14.nnic	NA	32214336	32217913	Gene ID= novel_gene_chr14_874 TPM= 3.19 Transcript Type= NA
chr14	32495061	32831049	32495061	32831049	+	transcript850.chr14.nic@AKAP6	transcript850.chr14.nic	protein_coding	32495061,32535554,32545230,32577120,32599410,32600629,32678311,32695990,32732454,32735658,32773678,32821402,32829848	32495404,32535805,32546999,32577242,32599506,32600792,32678459,32696110,32732600,32735882,32773893,32824815,32831049	Gene ID= ENSG00000151320.10 TPM= 10.62 Transcript Type= NA
chr14	32418351	32733162	32418351	32733162	+	transcript858.chr14.nnic@AKAP6	transcript858.chr14.nnic	protein_coding	32418351,32433460,32535554,32545230,32577120,32599410,32600629,32678311,32695990,32732454	32418440,32433817,32535805,32546999,32577242,32599506,32600792,32678459,32696110,32733162	Gene ID= ENSG00000151320.10 TPM= 9.03 Transcript Type= NA
chr14	32495061	32733162	32495061	32733162	+	transcript863.chr14.nic@AKAP6	transcript863.chr14.nic	protein_coding	32495061,32535554,32545230,32577120,32599410,32600629,32678311,32695990,32732454	32495404,32535805,32546999,32577242,32599506,32600792,32678459,32696110,32733162	Gene ID= ENSG00000151320.10 TPM= 10.09 Transcript Type= NA
chr14	32440332	32442653	32440332	32442653	+	transcript867.chr14.nnic@NA	transcript867.chr14.nnic	NA	32440332	32442653	Gene ID= novel_gene_chr14_868 TPM= 2.12 Transcript Type= NA
chr14	32495266	32496574	32495266	32496574	+	transcript871.chr14.nnic@NA	transcript871.chr14.nnic	NA	32495266	32496574	Gene ID= novel_gene_chr14_872 TPM= 2.12 Transcript Type= NA
chr14	32741821	32745295	32741821	32745295	-	transcript875.chr14.nnic@NA	transcript875.chr14.nnic	NA	32741821	32745295	Gene ID= novel_gene_chr14_876 TPM= 23.37 Transcript Type= NA
chr14	33054616	33055912	33054616	33055912	-	transcript877.chr14.nnic@NA	transcript877.chr14.nnic	NA	33054616	33055912	Gene ID= novel_gene_chr14_878 TPM= 2.12 Transcript Type= NA
chr14	33920347	33923666	33920347	33923666	+	transcript896.chr14.nnic@NA	transcript896.chr14.nnic	NA	33920347	33923666	Gene ID= novel_gene_chr14_897 TPM= 3.19 Transcript Type= NA
chr14	33922813	33924961	33922813	33924961	+	transcript894.chr14.nnic@NA	transcript894.chr14.nnic	NA	33922813	33924961	Gene ID= novel_gene_chr14_895 TPM= 27.62 Transcript Type= NA
chr14	33924231	33951081	33924231	33951081	-	ENST00000250457.7@EGLN3	ENST00000250457.7	protein_coding	33950396,33931096,33929076,33926960,33924231	33951081,33931215,33929212,33927033,33925922	Gene ID= ENSG00000129521.13 TPM= 67.98 Transcript Type= protein_coding
chr14	33929545	33933326	33929545	33933326	+	transcript898.chr14.nnic@NA	transcript898.chr14.nnic	NA	33929545	33933326	Gene ID= novel_gene_chr14_899 TPM= 5.31 Transcript Type= NA
chr14	33958910	33964145	33958910	33964145	+	transcript907.chr14.nnic@NA	transcript907.chr14.nnic	NA	33958910,33963969	33959167,33964145	Gene ID= novel_gene_chr14_908 TPM= 25.49 Transcript Type= NA
chr14	34432789	34462356	34432789	34462356	-	ENST00000298130.4@SPTSSA	ENST00000298130.4	protein_coding	34462096,34432789	34462356,34435304	Gene ID= ENSG00000165389.6 TPM= 1.06 Transcript Type= protein_coding
chr14	34516012	34539737	34516012	34539737	-	transcript917.chr14.nnic@EAPP	transcript917.chr14.nnic	protein_coding	34539555,34536094,34533444,34524697,34516012	34539737,34536275,34533539,34524807,34516586	Gene ID= ENSG00000129518.8 TPM= 2.12 Transcript Type= NA
chr14	34515929	34539710	34515929	34539710	-	ENST00000250454.7@EAPP	ENST00000250454.7	protein_coding	34539555,34536094,34533444,34529358,34524697,34515929	34539710,34536275,34533539,34529475,34524807,34516586	Gene ID= ENSG00000129518.8 TPM= 1.06 Transcript Type= protein_coding
chr14	34562409	34630125	34562409	34630125	-	transcript928.chr14.nic@SNX6	transcript928.chr14.nic	protein_coding	34629907,34609638,34608030,34605596,34604135,34603348,34597550,34593045,34586230,34581561,34575756,34567854,34567686,34562409	34630125,34609742,34608140,34605717,34604268,34603471,34597645,34593150,34586305,34581600,34575842,34568013,34567771,34563175	Gene ID= ENSG00000129515.18 TPM= 6.37 Transcript Type= NA
chr14	34562409	34630183	34562409	34630183	-	ENST00000362031.8@SNX6	ENST00000362031.8	protein_coding	34630111,34629907,34609638,34608030,34605596,34603348,34597550,34593045,34586230,34581561,34575756,34567854,34567686,34562409	34630183,34629954,34609742,34608140,34605717,34603471,34597645,34593150,34586305,34581600,34575842,34568013,34567771,34563175	Gene ID= ENSG00000129515.18 TPM= 75.41 Transcript Type= protein_coding
chr14	34712008	34714594	34712008	34714594	-	transcript943.chr14.nnic@CFL2	transcript943.chr14.nnic	protein_coding	34714538,34713674,34713254,34713060,34712008	34714594,34713904,34713561,34713136,34712977	Gene ID= ENSG00000165410.14 TPM= 62.67 Transcript Type= NA
chr14	34710387	34713828	34710387	34713828	-	ENST00000341223.7@CFL2	ENST00000341223.7	protein_coding	34713674,34713254,34713060,34710387	34713828,34713561,34713136,34712977	Gene ID= ENSG00000165410.14 TPM= 11.68 Transcript Type= protein_coding
chr14	34712008	34714823	34712008	34714823	-	ENST00000554470.5@CFL2	ENST00000554470.5	protein_coding	34714538,34713508,34713060,34712008	34714823,34713561,34713136,34712977	Gene ID= ENSG00000165410.14 TPM= 27.62 Transcript Type= nonsense_mediated_decay
chr14	34712037	34714577	34712037	34714577	-	ENST00000422678.2@CFL2	ENST00000422678.2	protein_coding	34714538,34713397,34713060,34712037	34714577,34713561,34713136,34712977	Gene ID= ENSG00000165410.14 TPM= 19.12 Transcript Type= nonsense_mediated_decay
chr14	34800243	34875398	34800243	34875398	-	transcript970.chr14.nic@BAZ1A	transcript970.chr14.nic	protein_coding	34875138,34874492,34862044,34826013,34810935,34807451,34802854,34801094,34800243	34875398,34874662,34862322,34826156,34811036,34807538,34802988,34801193,34800390	Gene ID= ENSG00000198604.10 TPM= 4.25 Transcript Type= NA
chr14	34752732	34874932	34752732	34874932	-	ENST00000382422.6@BAZ1A	ENST00000382422.6	protein_coding	34874492,34862044,34826013,34810935,34807451,34802854,34801094,34800224,34795670,34794749,34792775,34786126,34785777,34783762,34783119,34780186,34775919,34774327,34773572,34771511,34765021,34764707,34761757,34758704,34754827,34752732	34874932,34862322,34826156,34811036,34807538,34802988,34801193,34800390,34795765,34794887,34792921,34786221,34786001,34783927,34783232,34780310,34776515,34774490,34773726,34771659,34765268,34764933,34762223,34758846,34754914,34753704	Gene ID= ENSG00000198604.10 TPM= 1.06 Transcript Type= protein_coding
chr14	34874343	34876459	34874343	34876459	+	ENST00000557373.1@AL121603.2	ENST00000557373.1	antisense_RNA	34874343	34876459	Gene ID= ENSG00000258738.1 TPM= 11.68 Transcript Type= antisense_RNA
chr14	35046244	35079012	35046244	35079012	+	transcript991.chr14.nic@FAM177A1	transcript991.chr14.nic	protein_coding	35046244,35046505,35053278,35077150,35078927	35046406,35046628,35053451,35077216,35079012	Gene ID= ENSG00000151327.12 TPM= 8.5 Transcript Type= NA
chr14	35046251	35081725	35046251	35081725	+	transcript999.chr14.nic@FAM177A1	transcript999.chr14.nic	protein_coding	35046251,35053278,35077150,35078927,35081022	35047084,35053451,35077216,35079024,35081725	Gene ID= ENSG00000151327.12 TPM= 4.25 Transcript Type= NA
chr14	35046251	35079012	35046251	35079012	+	transcript1002.chr14.nic@FAM177A1	transcript1002.chr14.nic	protein_coding	35046251,35053278,35077150,35078927	35046628,35053451,35077216,35079012	Gene ID= ENSG00000151327.12 TPM= 14.87 Transcript Type= NA
chr14	35046244	35050396	35046244	35050396	+	transcript1003.chr14.nic@FAM177A1	transcript1003.chr14.nic	protein_coding	35046244,35046505,35050033	35046406,35046628,35050396	Gene ID= ENSG00000151327.12 TPM= 8.5 Transcript Type= NA
chr14	35046378	35081387	35046378	35081387	+	ENST00000382406.7@FAM177A1	ENST00000382406.7	protein_coding	35046378,35046505,35053278,35077150,35078927,35081022	35046406,35046628,35053451,35077216,35079024,35081387	Gene ID= ENSG00000151327.12 TPM= 7.44 Transcript Type= protein_coding
chr14	35046403	35083383	35046403	35083383	+	ENST00000280987.8@FAM177A1	ENST00000280987.8	protein_coding	35046403,35053278,35077150,35078927,35081022	35046628,35053451,35077216,35079024,35083383	Gene ID= ENSG00000151327.12 TPM= 59.48 Transcript Type= protein_coding
chr14	35046453	35050396	35046453	35050396	+	ENST00000554052.2@FAM177A1	ENST00000554052.2	protein_coding	35046453,35050033	35046628,35050396	Gene ID= ENSG00000151327.12 TPM= 14.87 Transcript Type= protein_coding
chr14	35085473	35122519	35085473	35122519	-	transcript978.chr14.nic@PPP2R3C	transcript978.chr14.nic	protein_coding	35122222,35121902,35116610,35110525,35109819,35108139,35107304,35099252,35096709,35096558,35095048,35091070,35087951,35085473	35122519,35122101,35116737,35110629,35109931,35108236,35107374,35099384,35096764,35096633,35095184,35091207,35088010,35085778	Gene ID= ENSG00000092020.10 TPM= 18.59 Transcript Type= NA
chr14	35085467	35122313	35085467	35122313	-	ENST00000261475.9@PPP2R3C	ENST00000261475.9	protein_coding	35121902,35116610,35110525,35109819,35108139,35107304,35099252,35096709,35096558,35095048,35091070,35087951,35085467	35122313,35116737,35110629,35109931,35108236,35107374,35099384,35096764,35096633,35095184,35091207,35088010,35085778	Gene ID= ENSG00000092020.10 TPM= 9.03 Transcript Type= protein_coding
chr14	35085473	35122447	35085473	35122447	-	ENST00000554222.5@PPP2R3C	ENST00000554222.5	protein_coding	35122222,35121902,35110525,35109819,35108139,35107304,35099252,35096709,35096558,35095048,35091070,35087951,35085473	35122447,35122101,35110629,35109931,35108236,35107374,35099384,35096764,35096633,35095184,35091207,35088010,35085778	Gene ID= ENSG00000092020.10 TPM= 11.68 Transcript Type= nonsense_mediated_decay
chr14	35122552	35274078	35122552	35274078	+	ENST00000321130.14@KIAA0391	ENST00000321130.14	protein_coding	35122552,35127479,35180670,35266727,35270401,35273435	35122910,35127611,35180777,35266875,35270596,35274078	Gene ID= ENSG00000100890.15 TPM= 1.06 Transcript Type= protein_coding
chr14	35122570	35274065	35122570	35274065	+	ENST00000534898.8@KIAA0391	ENST00000534898.8	protein_coding	35122570,35122952,35126735,35127479,35180670,35266727,35270401,35273435	35122635,35124231,35126782,35127611,35180777,35266875,35270596,35274065	Gene ID= ENSG00000100890.15 TPM= 13.81 Transcript Type= protein_coding
chr14	35292317	35317478	35292317	35317478	+	ENST00000622405.4@PSMA6	ENST00000622405.4	protein_coding	35292317,35308914,35310740,35312881,35314361,35317249	35292552,35308995,35310895,35313059,35314455,35317478	Gene ID= ENSG00000100902.10 TPM= 5.31 Transcript Type= protein_coding
chr14	35292357	35317474	35292357	35317474	+	ENST00000261479.8@PSMA6	ENST00000261479.8	protein_coding	35292357,35307994,35308914,35310740,35312881,35314361,35317249	35292552,35308088,35308995,35310895,35313059,35314455,35317474	Gene ID= ENSG00000100902.10 TPM= 174.19 Transcript Type= protein_coding
chr14	35401511	35404746	35401511	35404746	-	ENST00000216797.9@NFKBIA	ENST00000216797.9	protein_coding	35404418,35403690,35403150,35402771,35402394,35401511	35404746,35403798,35403360,35402859,35402663,35402060	Gene ID= ENSG00000100906.10 TPM= 18.06 Transcript Type= protein_coding
chr14	35538352	35809226	35538352	35809226	-	ENST00000389698.7@RALGAPA1	ENST00000389698.7	protein_coding	35808730,35775635,35775006,35770942,35762710,35760829,35756793,35752024,35750482,35748585,35742368,35738513,35728362,35725024,35723027,35721688,35689836,35686542,35684929,35683809,35677950,35674516,35674180,35672867,35671389,35664642,35659138,35655807,35654367,35651805,35635464,35634574,35627090,35625361,35605586,35595634,35572560,35570617,35549110,35548508,35538352	35809226,35775745,35775055,35770999,35762753,35761006,35756908,35752162,35750690,35748824,35742565,35738650,35728510,35725153,35723264,35721849,35690003,35686666,35685145,35683985,35678102,35674709,35674278,35673022,35671517,35664767,35659196,35655915,35654477,35651873,35635598,35634757,35627951,35625432,35605709,35595789,35572718,35570744,35549234,35548538,35539690	Gene ID= ENSG00000174373.16 TPM= 1.06 Transcript Type= protein_coding
chr14	35826318	35871963	35826318	35871963	+	ENST00000216807.11@BRMS1L	ENST00000216807.11	protein_coding	35826318,35831410,35832978,35834844,35862590,35863870,35864935,35865722,35867906,35870360	35826658,35831500,35833105,35834923,35862686,35863953,35864999,35865761,35868032,35871963	Gene ID= ENSG00000100916.13 TPM= 20.18 Transcript Type= protein_coding
chr14	36298565	36320687	36298565	36320687	-	transcript1026.chr14.nnic@MBIP	transcript1026.chr14.nnic	protein_coding	36320460,36316693,36314691,36314512,36311573,36308092,36300785,36298565	36320687,36316812,36314915,36314608,36311725,36308189,36300823,36299190	Gene ID= ENSG00000151332.18 TPM= 2.12 Transcript Type= NA
chr14	36298568	36320627	36298568	36320627	-	ENST00000318473.11@MBIP	ENST00000318473.11	protein_coding	36320460,36316693,36314691,36314512,36311959,36311573,36308092,36300785,36298568	36320627,36316812,36314915,36314608,36312024,36311725,36308189,36300823,36299187	Gene ID= ENSG00000151332.18 TPM= 2.12 Transcript Type= protein_coding
chr14	37171888	37173811	37171888	37173811	+	ENST00000556667.1@SLC25A21-AS1	ENST00000556667.1	antisense_RNA	37171888	37173811	Gene ID= ENSG00000258708.1 TPM= 2.12 Transcript Type= antisense_RNA
chr14	37197950	37552361	37197950	37552361	+	ENST00000327441.11@MIPOL1	ENST00000327441.11	protein_coding	37197950,37227726,37247103,37247829,37266938,37268658,37270420,37285318,37308056,37308349,37369517,37422855,37499908,37546905	37198104,37227838,37247240,37247907,37267169,37268793,37270525,37285447,37308089,37308519,37369624,37422949,37500138,37552361	Gene ID= ENSG00000151338.18 TPM= 1.06 Transcript Type= protein_coding
chr14	37197920	37547663	37197920	37547663	+	transcript1032.chr14.nic@MIPOL1	transcript1032.chr14.nic	protein_coding	37197920,37247103,37247829,37266938,37268658,37270420,37285318,37308056,37308349,37369517,37422855,37499908,37546905	37198104,37247240,37247907,37267169,37268793,37270525,37285447,37308089,37308519,37369624,37422949,37500138,37547663	Gene ID= ENSG00000151338.18 TPM= 3.19 Transcript Type= NA
chr14	38251416	38256106	38251416	38256106	-	transcript1041.chr14.nnic@NA	transcript1041.chr14.nnic	NA	38251416	38256106	Gene ID= novel_gene_chr14_1042 TPM= 3.19 Transcript Type= NA
chr14	38254103	38256369	38254103	38256369	-	ENST00000342213.2@CLEC14A	ENST00000342213.2	protein_coding	38254103	38256369	Gene ID= ENSG00000176435.6 TPM= 65.85 Transcript Type= protein_coding
chr14	39031920	39103528	39031920	39103528	-	ENST00000307712.10@SEC23A	ENST00000307712.10	protein_coding	39103032,39095898,39093187,39092541,39091477,39086929,39085762,39075935,39074415,39067173,39064913,39063324,39061765,39055143,39048652,39045163,39042786,39040732,39039031,39031920	39103528,39096139,39093244,39092627,39091713,39087008,39085906,39076093,39074530,39067296,39064993,39063413,39061871,39055296,39048729,39045324,39042872,39040887,39039096,39033328	Gene ID= ENSG00000100934.14 TPM= 131.71 Transcript Type= protein_coding
chr14	39114223	39136973	39114223	39136973	+	ENST00000308317.10@GEMIN2	ENST00000308317.10	protein_coding	39114223,39114829,39117999,39118540,39122430,39124992,39128280,39131958,39133661,39136440	39114475,39114913,39118088,39118599,39122543,39125036,39128348,39132068,39133719,39136973	Gene ID= ENSG00000092208.16 TPM= 9.56 Transcript Type= protein_coding
chr14	39147812	39170322	39147812	39170322	-	ENST00000330149.9@TRAPPC6B	ENST00000330149.9	protein_coding	39170015,39159483,39158285,39154211,39151746,39147812	39170322,39159550,39158402,39154294,39151839,39150381	Gene ID= ENSG00000182400.14 TPM= 12.21 Transcript Type= protein_coding
chr14	39147812	39170393	39147812	39170393	-	ENST00000347691.9@TRAPPC6B	ENST00000347691.9	protein_coding	39170015,39159483,39158285,39151746,39147812	39170393,39159550,39158402,39151839,39150381	Gene ID= ENSG00000182400.14 TPM= 3.72 Transcript Type= protein_coding
chr14	39266242	39350690	39266242	39350690	+	transcript1072.chr14.nic@CTAGE5	transcript1072.chr14.nic	protein_coding	39266242,39276934,39279337,39279449,39291019,39293271,39294000,39294925,39299864,39302129,39303478,39304291,39308449,39313340,39314739,39315683,39317944,39319209,39326864,39345904,39347713,39348743,39350098	39266527,39277065,39279358,39279537,39291096,39293381,39294071,39295029,39299986,39302249,39303524,39304381,39308587,39313441,39314799,39315718,39318011,39319291,39327022,39346026,39347771,39348977,39350690	Gene ID= ENSG00000150527.17 TPM= 2.47 Transcript Type= NA
chr14	39265968	39350423	39265968	39350423	+	ENST00000396165.8@CTAGE5	ENST00000396165.8	protein_coding	39265968,39276934,39279337,39279449,39291019,39293271,39294000,39294925,39299864,39302129,39303478,39304291,39308449,39313340,39314739,39315683,39317944,39319209,39320928,39326864,39345904,39347713,39348743,39350098	39266527,39277065,39279358,39279537,39291096,39293381,39294071,39295029,39299986,39302249,39303524,39304381,39308587,39313441,39314799,39315718,39318011,39319291,39321056,39327022,39346026,39347771,39348977,39350423	Gene ID= ENSG00000150527.17 TPM= 1.06 Transcript Type= protein_coding
chr14	39265292	39350694	39265292	39350694	+	ENST00000341749.7@CTAGE5	ENST00000341749.7	protein_coding	39265292,39276934,39279337,39279449,39291019,39293271,39294000,39294925,39299864,39302129,39303478,39304291,39308449,39313340,39314739,39315683,39317944,39319209,39320928,39326864,39345904,39347713,39348743,39350098	39265421,39277065,39279358,39279537,39291096,39293381,39294071,39295029,39299986,39302249,39303524,39304381,39308587,39313441,39314799,39315718,39318011,39319291,39321056,39327022,39346026,39347771,39348977,39350694	Gene ID= ENSG00000150527.17 TPM= 4.6 Transcript Type= protein_coding
chr14	39267414	39350694	39267414	39350694	+	ENST00000348007.7@CTAGE5	ENST00000348007.7	protein_coding	39267414,39276934,39279337,39279449,39291019,39293271,39294000,39294925,39299864,39302129,39303478,39304291,39308449,39313340,39314739,39315683,39317944,39319209,39326864,39345904,39347713,39348743,39350098	39267522,39277065,39279358,39279537,39291096,39293381,39294071,39295029,39299986,39302249,39303524,39304381,39308587,39313441,39314799,39315718,39318011,39319291,39327022,39346026,39347771,39348977,39350694	Gene ID= ENSG00000150527.17 TPM= 2.47 Transcript Type= protein_coding
chr14	39397669	39432500	39397669	39432500	-	ENST00000298097.7@FBXO33	ENST00000298097.7	protein_coding	39431564,39402401,39401176,39397669	39432500,39402511,39401861,39399787	Gene ID= ENSG00000165355.7 TPM= 2.12 Transcript Type= protein_coding
chr14	44897295	44907257	44897295	44907257	+	ENST00000325192.7@C14orf28	ENST00000325192.7	protein_coding	44897295,44900435,44903207,44904395,44905367	44897568,44900959,44903296,44904529,44907257	Gene ID= ENSG00000179476.7 TPM= 1.06 Transcript Type= protein_coding
chr14	44924319	44961965	44924319	44961965	-	ENST00000396128.8@KLHL28	ENST00000396128.8	protein_coding	44961846,44945030,44934115,44931333,44924319	44961965,44945928,44934558,44931541,44929191	Gene ID= ENSG00000179454.13 TPM= 2.12 Transcript Type= protein_coding
chr14	44962208	45074431	44962208	45074431	+	ENST00000361577.7@TOGARAM1	ENST00000361577.7	protein_coding	44962208,44995746,44999363,45004061,45006008,45008913,45011975,45025783,45027299,45028176,45032223,45043686,45044635,45052436,45054431,45066578,45068424,45071712,45073296	44964467,44995902,44999497,45004366,45006267,45009145,45012075,45025872,45027474,45028329,45032376,45043791,45044870,45052562,45054549,45066767,45068643,45071798,45074431	Gene ID= ENSG00000198718.12 TPM= 5.31 Transcript Type= protein_coding
chr14	44962214	45008147	44962214	45008147	+	ENST00000555607.1@TOGARAM1	ENST00000555607.1	protein_coding	44962214,44995746,44999363,45004061,45006008	44964467,44995902,44999497,45004366,45008147	Gene ID= ENSG00000198718.12 TPM= 1.06 Transcript Type= retained_intron
chr14	45084102	45115601	45084102	45115601	+	transcript1102.chr14.nic@PRPF39	transcript1102.chr14.nic	protein_coding	45084102,45095221,45096103,45096424,45096887,45102529,45107451,45108415,45109616,45109894,45110094,45110549,45112318,45114183,45114494,45114857	45084249,45095563,45096228,45096758,45097005,45102696,45107616,45108522,45109780,45109993,45110220,45110817,45112502,45114257,45114614,45115601	Gene ID= ENSG00000185246.17 TPM= 2.12 Transcript Type= NA
chr14	45084099	45115601	45084099	45115601	+	ENST00000355765.10@PRPF39	ENST00000355765.10	protein_coding	45084099,45095221,45096103,45096887,45102529,45107451,45108415,45109616,45110094,45110549,45112318,45114183,45114494,45114857	45084249,45095563,45096228,45097005,45102696,45107616,45108522,45109780,45110220,45110817,45112502,45114257,45114614,45115601	Gene ID= ENSG00000185246.17 TPM= 10.62 Transcript Type= protein_coding
chr14	45121483	45134511	45121483	45134511	-	transcript1123.chr14.nic@FKBP3	transcript1123.chr14.nic	protein_coding	45134349,45130699,45129794,45121483	45134511,45130800,45129901,45121620	Gene ID= ENSG00000100442.10 TPM= 6.37 Transcript Type= NA
chr14	45132166	45134485	45132166	45134485	-	transcript1128.chr14.nnic@NA	transcript1128.chr14.nnic	NA	45132166	45134485	Gene ID= novel_gene_chr14_1129 TPM= 2.12 Transcript Type= NA
chr14	45135947	45200887	45135947	45200887	+	ENST00000267430.9@FANCM	ENST00000267430.9	protein_coding	45135947,45137069,45140632,45148837,45151397,45153920,45154697,45155373,45159096,45164359,45166950,45170589,45173055,45175071,45181430,45181637,45183774,45185217,45187781,45188802,45196172,45198644,45199870	45136539,45137241,45140709,45148995,45151528,45154052,45154822,45155459,45159280,45164565,45167163,45170746,45173210,45176976,45181524,45181705,45183902,45185373,45187887,45189362,45196547,45198935,45200887	Gene ID= ENSG00000187790.10 TPM= 2.12 Transcript Type= protein_coding
chr14	45224253	45253542	45224253	45253542	-	transcript1134.chr14.nic@MIS18BP1	transcript1134.chr14.nic	protein_coding	45253035,45246743,45242761,45242034,45237648,45235814,45232733,45231141,45227663,45226743,45224253	45253542,45247377,45242874,45242518,45237721,45235944,45232820,45231298,45227814,45226836,45224746	Gene ID= ENSG00000129534.13 TPM= 4.25 Transcript Type= NA
chr14	49583572	49586376	49583572	49586376	-	ENST00000245458.10@RPS29	ENST00000245458.10	protein_coding	49586285,49585950,49583572	49586376,49586049,49583675	Gene ID= ENSG00000213741.9 TPM= 230.49 Transcript Type= protein_coding
chr14	49598697	49614672	49598697	49614672	+	ENST00000298288.10@LRR1	ENST00000298288.10	protein_coding	49598697,49602370,49607400,49614256	49599203,49602468,49608121,49614672	Gene ID= ENSG00000165501.16 TPM= 3.19 Transcript Type= protein_coding
chr14	49618519	49620685	49618519	49620685	-	ENST00000298289.6@RPL36AL	ENST00000298289.6	protein_coding	49620562,49618519	49620685,49619140	Gene ID= ENSG00000165502.6 TPM= 131.71 Transcript Type= protein_coding
chr14	49620795	49623481	49620795	49623481	+	ENST00000305386.3@MGAT2	ENST00000305386.3	protein_coding	49620795	49623481	Gene ID= ENSG00000168282.5 TPM= 6.37 Transcript Type= protein_coding
chr14	49625174	49635230	49625174	49635230	-	ENST00000298292.12@DNAAF2	ENST00000298292.12	protein_coding	49633287,49628012,49625174	49635230,49628155,49626048	Gene ID= ENSG00000165506.14 TPM= 16.46 Transcript Type= protein_coding
chr14	49625174	49635230	49625174	49635230	-	ENST00000406043.3@DNAAF2	ENST00000406043.3	protein_coding	49633287,49625174	49635230,49626048	Gene ID= ENSG00000165506.14 TPM= 7.97 Transcript Type= protein_coding
chr14	49693105	49753152	49693105	49753152	+	ENST00000359332.6@KLHDC1	ENST00000359332.6	protein_coding	49693105,49709159,49709709,49710263,49723874,49725686,49728926,49729490,49732704,49734589,49740098,49743753,49751586	49693290,49709229,49709826,49710381,49723952,49725769,49729009,49729548,49732816,49734661,49740182,49743805,49753152	Gene ID= ENSG00000197776.7 TPM= 7.44 Transcript Type= protein_coding
chr14	49767608	49786385	49767608	49786385	+	ENST00000298307.9@KLHDC2	ENST00000298307.9	protein_coding	49767608,49771594,49774561,49777839,49778178,49778411,49779595,49779748,49780213,49780703,49782370,49782542,49782830	49768621,49771673,49774678,49777954,49778259,49778494,49779675,49779806,49780322,49780775,49782457,49782594,49786385	Gene ID= ENSG00000165516.10 TPM= 1.06 Transcript Type= protein_coding
chr14	49768168	49783115	49768168	49783115	+	ENST00000555443.5@KLHDC2	ENST00000555443.5	protein_coding	49768168,49771594,49774561,49777839,49778178,49778411,49779595,49780213,49780703,49782370,49782542,49782830	49768621,49771673,49774678,49777954,49778259,49778494,49779806,49780322,49780775,49782457,49782594,49783115	Gene ID= ENSG00000165516.10 TPM= 12.75 Transcript Type= nonsense_mediated_decay
chr14	49893092	49897054	49893092	49897054	+	ENST00000298316.6@ARF6	ENST00000298316.6	protein_coding	49893092,49893256	49893157,49897054	Gene ID= ENSG00000165527.6 TPM= 83.91 Transcript Type= protein_coding
chr14	50108633	50116557	50108633	50116557	-	ENST00000395860.6@VCPKMT	ENST00000395860.6	protein_coding	50116287,50116069,50115839,50114285,50112615,50108633	50116557,50116179,50115911,50114404,50112719,50109713	Gene ID= ENSG00000100483.13 TPM= 2.12 Transcript Type= protein_coding
chr14	50138727	50231925	50138727	50231925	-	transcript1201.chr14.nic@SOS2	transcript1201.chr14.nic	protein_coding	50231197,50204284,50200953,50199691,50188497,50182463,50180572,50174454,50161482,50159431,50158565,50156999,50153070,50150008,50145477,50145170,50139942,50138727	50231925,50204409,50201084,50199855,50188700,50182606,50180682,50174552,50161609,50160086,50158646,50157121,50153173,50150230,50145596,50145332,50140059,50138784	Gene ID= ENSG00000100485.11 TPM= 7.44 Transcript Type= NA
chr14	50156061	50231572	50156061	50231572	-	transcript1204.chr14.nic@SOS2	transcript1204.chr14.nic	protein_coding	50231197,50204284,50200953,50199691,50188497,50182463,50180572,50174454,50161482,50159431,50158565,50156061	50231572,50204409,50201084,50199855,50188700,50182606,50180682,50174552,50161609,50160086,50158646,50157121	Gene ID= ENSG00000100485.11 TPM= 4.25 Transcript Type= NA
chr14	50117120	50231558	50117120	50231558	-	ENST00000216373.9@SOS2	ENST00000216373.9	protein_coding	50231197,50204284,50200953,50199691,50188497,50182463,50180572,50174454,50161482,50159431,50158565,50156999,50153070,50150008,50145477,50145170,50139942,50138612,50134123,50130501,50129961,50120275,50117120	50231558,50204409,50201084,50199855,50188700,50182606,50180682,50174552,50161609,50160086,50158646,50157121,50153173,50150230,50145596,50145332,50140059,50138784,50134239,50130762,50130002,50120384,50118853	Gene ID= ENSG00000100485.11 TPM= 5.31 Transcript Type= protein_coding
chr14	50222454	50224896	50222454	50224896	+	transcript1207.chr14.nnic@NA	transcript1207.chr14.nnic	NA	50222454	50224896	Gene ID= novel_gene_chr14_1208 TPM= 4.25 Transcript Type= NA
chr14	50242434	50312548	50242434	50312548	-	ENST00000267436.8@L2HGDH	ENST00000267436.8	protein_coding	50312011,50302902,50302017,50294115,50283871,50278520,50269163,50267753,50265358,50242434	50312548,50303017,50302168,50294246,50284033,50278554,50269330,50267910,50265489,50247253	Gene ID= ENSG00000087299.11 TPM= 4.25 Transcript Type= protein_coding
chr14	50312324	50326715	50312324	50326715	+	transcript1215.chr14.nnic@ATP5S	transcript1215.chr14.nnic	protein_coding	50312324,50314591,50321483,50322511,50323945,50325609	50312389,50314626,50321594,50322719,50324116,50326715	Gene ID= ENSG00000125375.14 TPM= 3.19 Transcript Type= NA
chr14	50312317	50326248	50312317	50326248	+	transcript1226.chr14.nic@ATP5S	transcript1226.chr14.nic	protein_coding	50312317,50321483,50322511,50323945,50325609	50312389,50321594,50322806,50324116,50326248	Gene ID= ENSG00000125375.14 TPM= 2.12 Transcript Type= NA
chr14	50312317	50322892	50312317	50322892	+	transcript1233.chr14.nic@ATP5S	transcript1233.chr14.nic	protein_coding	50312317,50321483,50322511	50312389,50321594,50322892	Gene ID= ENSG00000125375.14 TPM= 12.75 Transcript Type= NA
chr14	50418525	50532609	50418525	50532609	-	ENST00000013125.8@MAP4K5	ENST00000013125.8	protein_coding	50532400,50531942,50504800,50486104,50485578,50482361,50476259,50476128,50475077,50468651,50466583,50464052,50462665,50456516,50448774,50447414,50446079,50445041,50443939,50443729,50442732,50440362,50440013,50437894,50437476,50434962,50434394,50429192,50428662,50425907,50423121,50418525	50532609,50532158,50504857,50486194,50485642,50482416,50476306,50476170,50475149,50468782,50466645,50464133,50462781,50456594,50448832,50447481,50446121,50445194,50444036,50443770,50442816,50440441,50440073,50438011,50437534,50435065,50434571,50429260,50428754,50425977,50423176,50420106	Gene ID= ENSG00000012983.11 TPM= 2.12 Transcript Type= protein_coding
chr14	50418830	50532605	50418830	50532605	-	transcript1237.chr14.nic@MAP4K5	transcript1237.chr14.nic	protein_coding	50532448,50531942,50504800,50486104,50485578,50482361,50476259,50476128,50475077,50468651,50466583,50464052,50462665,50456516,50448774,50447414,50446079,50445041,50443939,50443729,50442732,50440362,50440013,50437894,50437476,50434962,50434394,50429192,50428662,50425907,50423121,50418830	50532605,50532158,50504857,50486194,50485642,50482416,50476306,50476170,50475149,50468782,50466645,50464133,50462781,50456594,50448832,50447481,50446121,50445194,50444036,50443770,50442816,50440441,50440073,50438011,50437534,50435065,50434571,50429260,50428754,50425977,50423176,50420106	Gene ID= ENSG00000012983.11 TPM= 2.12 Transcript Type= NA
chr14	50626614	50628941	50626614	50628941	-	transcript1253.chr14.nnic@NA	transcript1253.chr14.nnic	NA	50626614	50628941	Gene ID= novel_gene_chr14_1254 TPM= 4.25 Transcript Type= NA
chr14	50664433	50668329	50664433	50668329	-	transcript1252.chr14.nic@SAV1	transcript1252.chr14.nic	protein_coding	50667874,50664433	50668329,50665619	Gene ID= ENSG00000151748.14 TPM= 3.19 Transcript Type= NA
chr14	50633636	50668331	50633636	50668331	-	ENST00000324679.4@SAV1	ENST00000324679.4	protein_coding	50667874,50665179,50644744,50640750,50633636	50668331,50665619,50645014,50640893,50635384	Gene ID= ENSG00000151748.14 TPM= 14.87 Transcript Type= protein_coding
chr14	50740825	50792940	50740825	50792940	-	transcript1258.chr14.nic@NIN	transcript1258.chr14.nic	protein_coding	50792712,50778765,50776949,50772949,50772301,50771332,50770852,50770388,50766780,50766307,50763826,50761790,50759857,50756492,50754742,50754563,50752518,50747992,50744243,50743416,50740825	50792940,50778804,50777139,50773095,50772468,50771468,50770992,50770562,50766890,50766396,50763964,50761911,50760359,50758630,50754867,50754632,50752733,50748105,50744365,50743529,50741728	Gene ID= ENSG00000100503.23 TPM= 2.12 Transcript Type= NA
chr14	50759856	50831172	50759856	50831172	-	transcript1261.chr14.nic@NIN	transcript1261.chr14.nic	protein_coding	50831006,50830464,50821874,50806737,50792712,50778765,50776949,50772949,50772301,50771332,50770852,50770388,50766780,50766307,50763826,50761790,50759856	50831172,50830517,50822077,50806818,50792881,50778804,50777139,50773095,50772468,50771468,50770992,50770562,50766890,50766396,50763964,50761911,50760359	Gene ID= ENSG00000100503.23 TPM= 5.31 Transcript Type= NA
chr14	50763691	50831172	50763691	50831172	-	transcript1265.chr14.nic@NIN	transcript1265.chr14.nic	protein_coding	50831006,50830464,50821874,50806737,50792712,50778765,50776949,50772949,50772301,50771332,50770852,50770388,50766780,50766307,50763691	50831172,50830517,50822077,50806818,50792881,50778804,50777139,50773095,50772468,50771468,50770992,50770562,50766890,50766396,50763964	Gene ID= ENSG00000100503.23 TPM= 2.12 Transcript Type= NA
chr14	50905221	50944736	50905221	50944736	-	ENST00000216392.7@PYGL	ENST00000216392.7	protein_coding	50944161,50937736,50935107,50931673,50923969,50920956,50920541,50916962,50916642,50915825,50915336,50914701,50913029,50912156,50911978,50911730,50909895,50908821,50908271,50905221	50944736,50937837,50935185,50931776,50924100,50921067,50920623,50917105,50916734,50915971,50915499,50914815,50913130,50912303,50912036,50911871,50910102,50908955,50908337,50905556	Gene ID= ENSG00000100504.16 TPM= 4.25 Transcript Type= protein_coding
chr14	50923237	50944470	50923237	50944470	-	ENST00000530336.2@PYGL	ENST00000530336.2	protein_coding	50944161,50937736,50935107,50931673,50923237	50944470,50937837,50935185,50931776,50924100	Gene ID= ENSG00000100504.16 TPM= 1.06 Transcript Type= retained_intron
chr14	51240168	51257546	51240168	51257546	+	ENST00000457354.6@TMX1	ENST00000457354.6	protein_coding	51240168,51243856,51245313,51247092,51249326,51249468,51249693,51254341	51240444,51243971,51245358,51247220,51249371,51249569,51249765,51257546	Gene ID= ENSG00000139921.12 TPM= 1.06 Transcript Type= protein_coding
chr14	51651858	51730727	51651858	51730727	+	ENST00000395718.6@FRMD6	ENST00000395718.6	protein_coding	51651858,51689691,51698142,51701056,51702512,51704749,51708078,51711531,51712483,51715325,51720055,51721949,51725779,51727745	51651996,51689935,51698232,51701135,51702588,51704935,51708233,51711596,51712551,51715499,51720390,51722080,51725870,51730727	Gene ID= ENSG00000139926.15 TPM= 5.31 Transcript Type= protein_coding
chr14	51989615	52004653	51989615	52004653	+	ENST00000556760.5@C14orf166	ENST00000556760.5	protein_coding	51989615,51991317,51993723,51998494,51999708,52001798,52004240,52004362	51989700,51991441,51993822,51998580,51999796,52001866,52004242,52004653	Gene ID= ENSG00000087302.8 TPM= 2.12 Transcript Type= protein_coding
chr14	52004803	52068994	52004803	52068994	-	ENST00000216286.9@NID2	ENST00000216286.9	protein_coding	52068767,52067858,52060124,52054020,52053579,52042782,52042105,52040651,52038747,52029547,52028722,52027201,52020059,52019061,52015054,52014287,52011554,52010876,52007810,52006537,52005737,52004803	52068994,52068163,52060356,52054321,52053938,52042931,52042350,52040851,52038977,52029690,52028850,52027344,52020178,52019294,52015275,52014456,52011683,52011047,52007967,52006660,52005849,52005496	Gene ID= ENSG00000087303.17 TPM= 10.62 Transcript Type= protein_coding
chr14	52068041	52070166	52068041	52070166	+	transcript1295.chr14.nnic@NA	transcript1295.chr14.nnic	NA	52068041	52070166	Gene ID= novel_gene_chr14_1296 TPM= 2.12 Transcript Type= NA
chr14	52267713	52276724	52267713	52276724	+	ENST00000306051.2@PTGDR	ENST00000306051.2	protein_coding	52267713,52274731	52268660,52276724	Gene ID= ENSG00000168229.3 TPM= 1.06 Transcript Type= protein_coding
chr14	52707170	52727990	52707170	52727990	+	transcript1310.chr14.nnic@PSMC6	transcript1310.chr14.nnic	protein_coding	52707170,52708309,52708483,52708764,52711101,52711410,52713881,52718081,52718229,52718977,52720861,52721110,52723759,52723965,52727499	52707304,52708388,52708522,52708816,52711168,52711524,52713968,52718142,52718352,52719038,52720981,52721190,52723874,52724036,52727990	Gene ID= ENSG00000100519.11 TPM= 2.12 Transcript Type= NA
chr14	52707172	52728587	52707172	52728587	+	ENST00000445930.6@PSMC6	ENST00000445930.6	protein_coding	52707172,52708309,52708483,52708764,52711101,52711410,52713881,52718081,52718229,52718977,52720861,52721110,52723965,52727499	52707304,52708388,52708522,52708816,52711168,52711524,52713968,52718142,52718352,52719038,52720981,52721190,52724036,52728587	Gene ID= ENSG00000100519.11 TPM= 5.31 Transcript Type= protein_coding
chr14	52707186	52727990	52707186	52727990	+	transcript1318.chr14.nic@PSMC6	transcript1318.chr14.nic	protein_coding	52707186,52708483,52708764,52711101,52711410,52713881,52718081,52718229,52718977,52720861,52721110,52723965,52727499	52707304,52708522,52708816,52711168,52711524,52713968,52718142,52718352,52719038,52720981,52721190,52724036,52727990	Gene ID= ENSG00000100519.11 TPM= 2.12 Transcript Type= NA
chr14	52707204	52727991	52707204	52727991	+	ENST00000606149.5@PSMC6	ENST00000606149.5	protein_coding	52707204,52708309,52708483,52708764,52711101,52711410,52713881,52718081,52718229,52718977,52720861,52721110,52723965,52727499	52707304,52708388,52708522,52708816,52711168,52711524,52713968,52718142,52718352,52719038,52720981,52721190,52724036,52727991	Gene ID= ENSG00000100519.11 TPM= 10.62 Transcript Type= protein_coding
chr14	52857272	52951262	52857272	52951262	-	transcript1333.chr14.nic@FERMT2	transcript1333.chr14.nic	protein_coding	52950921,52950412,52919123,52893293,52881796,52881244,52881036,52878582,52875223,52874177,52872799,52864747,52864401,52861587,52861014,52860341,52859573,52857272	52951262,52950577,52919356,52893427,52881828,52881469,52881138,52878689,52875357,52874226,52872923,52864853,52864622,52861610,52861034,52860465,52859714,52858550	Gene ID= ENSG00000073712.14 TPM= 11.42 Transcript Type= NA
chr14	52857272	52951088	52857272	52951088	-	transcript1343.chr14.nic@FERMT2	transcript1343.chr14.nic	protein_coding	52950412,52919123,52893293,52881244,52881036,52878582,52875223,52874177,52872799,52864747,52864401,52860341,52859573,52857272	52951088,52919356,52893427,52881469,52881138,52878689,52875357,52874226,52872923,52864853,52864622,52860465,52859714,52858550	Gene ID= ENSG00000073712.14 TPM= 6.11 Transcript Type= NA
chr14	52857268	52951097	52857268	52951097	-	ENST00000341590.7@FERMT2	ENST00000341590.7	protein_coding	52950921,52950412,52919123,52893293,52881244,52881036,52878582,52875223,52874177,52872799,52864747,52864401,52860341,52859573,52857268	52951097,52950577,52919356,52893427,52881469,52881138,52878689,52875357,52874226,52872923,52864853,52864622,52860465,52859714,52858550	Gene ID= ENSG00000073712.14 TPM= 9.29 Transcript Type= protein_coding
chr14	53046027	53153262	53046027	53153262	-	transcript1354.chr14.nnic@DDHD1	transcript1354.chr14.nnic	protein_coding	53152261,53103683,53091785,53073741,53072597,53062943,53061126,53058477,53055660,53054438,53046027	53153262,53103856,53091932,53073847,53072703,53063205,53061201,53058626,53055912,53054629,53046949	Gene ID= ENSG00000100523.14 TPM= 2.12 Transcript Type= NA
chr14	53043968	53153282	53043968	53153282	-	ENST00000357758.3@DDHD1	ENST00000357758.3	protein_coding	53152261,53103683,53093316,53091785,53073741,53072597,53062943,53061126,53058477,53055660,53054438,53043968	53153282,53103856,53093444,53091932,53073847,53072703,53063205,53061201,53058626,53055912,53054629,53046949	Gene ID= ENSG00000100523.14 TPM= 2.12 Transcript Type= protein_coding
chr14	53949736	53956811	53949736	53956811	-	ENST00000559087.5@BMP4	ENST00000559087.5	protein_coding	53956759,53953276,53951853,53949736	53956811,53953400,53952229,53950888	Gene ID= ENSG00000125378.15 TPM= 1.06 Transcript Type= protein_coding
chr14	54423560	54441431	54423560	54441431	-	ENST00000216416.8@CNIH1	ENST00000216416.8	protein_coding	54441247,54436369,54432108,54430261,54423560	54441431,54436437,54432220,54430404,54427841	Gene ID= ENSG00000100528.11 TPM= 9.56 Transcript Type= protein_coding
chr14	54474485	54488870	54474485	54488870	-	transcript1368.chr14.nic@GMFB	transcript1368.chr14.nic	protein_coding	54488682,54483671,54482153,54481409,54480874,54479786,54474485	54488870,54483767,54482202,54481458,54480956,54479859,54478159	Gene ID= ENSG00000197045.12 TPM= 5.31 Transcript Type= NA
chr14	54474485	54489196	54474485	54489196	-	ENST00000358056.7@GMFB	ENST00000358056.7	protein_coding	54488925,54483671,54482153,54481409,54480874,54479786,54474485	54489196,54483767,54482202,54481458,54480956,54479859,54478159	Gene ID= ENSG00000197045.12 TPM= 30.8 Transcript Type= protein_coding
chr14	54509906	54538614	54509906	54538614	+	transcript1377.chr14.nic@CGRRF1	transcript1377.chr14.nic	protein_coding	54509906,54522454,54523150,54530049,54530903,54537722,54538063	54510063,54522593,54523245,54530226,54531050,54537829,54538614	Gene ID= ENSG00000100532.11 TPM= 2.12 Transcript Type= NA
chr14	54509828	54539309	54509828	54539309	+	ENST00000216420.11@CGRRF1	ENST00000216420.11	protein_coding	54509828,54522454,54530049,54530903,54537722,54538063	54510063,54522593,54530226,54531050,54537829,54539309	Gene ID= ENSG00000100532.11 TPM= 14.87 Transcript Type= protein_coding
chr14	54566101	54789127	54566101	54789127	+	transcript1384.chr14.nnic@SAMD4A	transcript1384.chr14.nnic	protein_coding	54566101,54567496,54702062,54737024,54748815,54751451,54760161,54764455,54770104,54774934,54776414,54784537,54788916	54566310,54568112,54702580,54737287,54748924,54751537,54760494,54764540,54770222,54775135,54776540,54784620,54789127	Gene ID= ENSG00000020577.13 TPM= 6.37 Transcript Type= NA
chr14	54567097	54789127	54567097	54789127	+	ENST00000554335.5@SAMD4A	ENST00000554335.5	protein_coding	54567097,54567496,54702062,54737024,54748815,54751451,54760161,54764455,54770104,54774934,54776414,54784537,54788916	54567338,54568112,54702580,54737287,54748924,54751537,54760494,54764540,54770222,54775135,54776540,54784620,54789127	Gene ID= ENSG00000020577.13 TPM= 3.19 Transcript Type= protein_coding
chr14	54784333	54789127	54784333	54789127	+	transcript1394.chr14.nic@SAMD4A	transcript1394.chr14.nic	protein_coding	54784333,54784537,54788916	54784447,54784620,54789127	Gene ID= ENSG00000020577.13 TPM= 38.24 Transcript Type= NA
chr14	54567632	54703867	54567632	54703867	+	ENST00000555112.1@SAMD4A	ENST00000555112.1	protein_coding	54567632,54702062	54568112,54703867	Gene ID= ENSG00000020577.13 TPM= 1.06 Transcript Type= processed_transcript
chr14	54567612	54793315	54567612	54793315	+	ENST00000392067.7@SAMD4A	ENST00000392067.7	protein_coding	54567612,54702062,54737024,54748815,54751451,54760161,54764455,54770104,54774934,54776414,54784537,54788916	54568112,54702580,54737287,54748924,54751537,54760494,54764540,54770222,54775135,54776540,54784620,54793315	Gene ID= ENSG00000020577.13 TPM= 101.97 Transcript Type= protein_coding
chr14	54576003	54578191	54576003	54578191	-	transcript1412.chr14.nnic@NA	transcript1412.chr14.nnic	NA	54576003	54578191	Gene ID= novel_gene_chr14_1413 TPM= 27.62 Transcript Type= NA
chr14	54597586	54600310	54597586	54600310	-	transcript1404.chr14.nnic@NA	transcript1404.chr14.nnic	NA	54597586	54600310	Gene ID= novel_gene_chr14_1405 TPM= 24.43 Transcript Type= NA
chr14	54607459	54611426	54607459	54611426	-	transcript1406.chr14.nnic@NA	transcript1406.chr14.nnic	NA	54607459	54611426	Gene ID= novel_gene_chr14_1407 TPM= 7.44 Transcript Type= NA
chr14	54688933	54691155	54688933	54691155	-	transcript1408.chr14.nnic@NA	transcript1408.chr14.nnic	NA	54688933	54691155	Gene ID= novel_gene_chr14_1409 TPM= 7.44 Transcript Type= NA
chr14	54717886	54719428	54717886	54719428	-	transcript1410.chr14.nnic@NA	transcript1410.chr14.nnic	NA	54717886	54719428	Gene ID= novel_gene_chr14_1411 TPM= 5.31 Transcript Type= NA
chr14	54726780	54728757	54726780	54728757	+	transcript1400.chr14.nnic@NA	transcript1400.chr14.nnic	NA	54726780	54728757	Gene ID= novel_gene_chr14_1401 TPM= 3.19 Transcript Type= NA
chr14	54736992	54740173	54736992	54740173	+	transcript1402.chr14.nnic@NA	transcript1402.chr14.nnic	NA	54736992	54740173	Gene ID= novel_gene_chr14_1403 TPM= 5.31 Transcript Type= NA
chr14	54842016	54902852	54842016	54902852	-	ENST00000491895.6@GCH1	ENST00000491895.6	protein_coding	54902321,54865327,54859681,54847099,54845768,54842016	54902852,54865436,54859736,54847130,54845852,54844143	Gene ID= ENSG00000131979.18 TPM= 1.06 Transcript Type= protein_coding
chr14	54939849	54940516	54939849	54940516	-	transcript1416.chr14.nnic@NA	transcript1416.chr14.nnic	NA	54939849	54940516	Gene ID= novel_gene_chr14_1417 TPM= 2.12 Transcript Type= NA
chr14	55027230	55049488	55027230	55049488	+	ENST00000395472.2@SOCS4	ENST00000395472.2	protein_coding	55027230,55042952	55027471,55049488	Gene ID= ENSG00000180008.8 TPM= 6.37 Transcript Type= protein_coding
chr14	55051631	55070192	55051631	55070192	+	ENST00000395468.8@MAPK1IP1L	ENST00000395468.8	protein_coding	55051631,55061680,55062618,55064616	55051803,55061701,55063325,55070192	Gene ID= ENSG00000168175.14 TPM= 49.92 Transcript Type= protein_coding
chr14	55053494	55054076	55053494	55054076	-	transcript1432.chr14.nnic@NA	transcript1432.chr14.nnic	NA	55053494	55054076	Gene ID= novel_gene_chr14_1433 TPM= 2.12 Transcript Type= NA
chr14	55129044	55145403	55129044	55145403	+	ENST00000254301.13@LGALS3	ENST00000254301.13	protein_coding	55129044,55137370,55138045,55140275,55142584,55145116	55129300,55137391,55138368,55140363,55142749,55145403	Gene ID= ENSG00000131981.15 TPM= 248.9 Transcript Type= protein_coding
chr14	55271303	55353609	55271303	55353609	+	ENST00000313833.4@FBXO34	ENST00000313833.4	protein_coding	55271303,55350381	55271537,55353609	Gene ID= ENSG00000178974.9 TPM= 31.33 Transcript Type= protein_coding
chr14	55307200	55353607	55307200	55353607	+	transcript1446.chr14.nnic@FBXO34	transcript1446.chr14.nnic	protein_coding	55307200,55350381	55307400,55353607	Gene ID= ENSG00000178974.9 TPM= 3.72 Transcript Type= NA
chr14	55394006	55411877	55394006	55411877	-	transcript1452.chr14.nic@ATG14	transcript1452.chr14.nic	protein_coding	55411602,55397372,55394006	55411877,55397434,55395982	Gene ID= ENSG00000126775.8 TPM= 2.12 Transcript Type= NA
chr14	55580188	55684579	55580188	55684579	+	transcript1463.chr14.nic@KTN1	transcript1463.chr14.nic	protein_coding	55580188,55612019,55616517,55617964,55619182,55627912,55629957,55633235,55634526,55636449,55637198,55637779,55639185,55639913,55640374,55640933,55641127,55641692,55646973,55648025,55648802,55649776,55650328,55650569,55651890,55652850,55653017,55653559,55656042,55658546,55659666,55661522,55663955,55667241,55670729,55671566,55671785,55672630,55672929,55675835,55678352,55679565,55684099	55580354,55612571,55616654,55618134,55619312,55628028,55630097,55633341,55634658,55636536,55637364,55637847,55639222,55640003,55640442,55640970,55641208,55641760,55647007,55648115,55648870,55649813,55650418,55650637,55651927,55652940,55653085,55653596,55656132,55658614,55659703,55661612,55664041,55667330,55670809,55671655,55671877,55672701,55673012,55675918,55678444,55679685,55684579	Gene ID= ENSG00000126777.17 TPM= 50.34 Transcript Type= NA
chr14	55580202	55684579	55580202	55684579	+	transcript1469.chr14.nic@KTN1	transcript1469.chr14.nic	protein_coding	55580202,55601757,55612019,55616517,55617964,55619182,55627912,55629957,55633235,55634526,55636449,55637198,55637779,55639185,55639913,55640374,55640933,55641127,55641692,55646973,55648025,55648802,55649776,55650328,55650569,55651890,55652850,55653017,55653559,55656042,55658546,55659666,55661522,55667241,55670729,55671566,55671785,55672630,55672929,55675835,55678352,55679565,55684099	55580354,55601880,55612571,55616654,55618134,55619312,55628028,55630097,55633341,55634658,55636536,55637364,55637847,55639222,55640003,55640442,55640970,55641208,55641760,55647007,55648115,55648870,55649813,55650418,55650637,55651927,55652940,55653085,55653596,55656132,55658614,55659703,55661612,55667330,55670809,55671655,55671877,55672701,55673012,55675918,55678444,55679685,55684579	Gene ID= ENSG00000126777.17 TPM= 13.02 Transcript Type= NA
chr14	55580198	55684579	55580198	55684579	+	transcript1476.chr14.nnic@KTN1	transcript1476.chr14.nnic	protein_coding	55580198,55616517,55617964,55619182,55627912,55629957,55633235,55634526,55636449,55637198,55637779,55639185,55639913,55640374,55640933,55641127,55641692,55646973,55648025,55648802,55649776,55650328,55650569,55651890,55652850,55653017,55653559,55656042,55658546,55659666,55661522,55663955,55667241,55670729,55671566,55671785,55672630,55672929,55675835,55678352,55679565,55684099	55580354,55616654,55618134,55619312,55628028,55630097,55633341,55634658,55636536,55637364,55637847,55639222,55640003,55640442,55640970,55641208,55641760,55647007,55648115,55648870,55649813,55650418,55650637,55651927,55652940,55653085,55653596,55656132,55658614,55659703,55661612,55664041,55667330,55670809,55671655,55671877,55672701,55673012,55675918,55678444,55679685,55684579	Gene ID= ENSG00000126777.17 TPM= 23.17 Transcript Type= NA
chr14	55580198	55684579	55580198	55684579	+	transcript1485.chr14.nnic@KTN1	transcript1485.chr14.nnic	protein_coding	55580198,55616517,55617964,55619182,55627912,55629957,55633235,55634526,55636449,55637198,55637779,55639185,55639913,55640374,55640933,55641127,55641692,55646973,55648025,55648802,55649776,55650328,55650569,55651890,55652850,55653017,55653559,55656042,55658546,55659666,55661522,55667241,55670729,55671566,55671785,55672630,55672929,55675835,55678352,55679565,55684099	55580354,55616654,55618134,55619312,55628028,55630097,55633341,55634658,55636536,55637364,55637847,55639222,55640003,55640442,55640970,55641208,55641760,55647007,55648115,55648870,55649813,55650418,55650637,55651927,55652940,55653085,55653596,55656132,55658614,55659703,55661612,55667330,55670809,55671655,55671877,55672701,55673012,55675918,55678444,55679685,55684579	Gene ID= ENSG00000126777.17 TPM= 24.23 Transcript Type= NA
chr14	55580315	55684579	55580315	55684579	+	ENST00000438792.6@KTN1	ENST00000438792.6	protein_coding	55580315,55612019,55616517,55617964,55619182,55627912,55629957,55633235,55634526,55636449,55637198,55637779,55639185,55639913,55640374,55640933,55641127,55641692,55646973,55648025,55648802,55649776,55650328,55650569,55651890,55652850,55653017,55653559,55656042,55658546,55659666,55661522,55667241,55670729,55671566,55671785,55672630,55672929,55675835,55678352,55679565,55684099	55580354,55612571,55616654,55618134,55619312,55628028,55630097,55633341,55634658,55636536,55637364,55637847,55639222,55640003,55640442,55640970,55641208,55641760,55647007,55648115,55648870,55649813,55650418,55650637,55651927,55652940,55653085,55653596,55656132,55658614,55659703,55661612,55667330,55670809,55671655,55671877,55672701,55673012,55675918,55678444,55679685,55684579	Gene ID= ENSG00000126777.17 TPM= 27.54 Transcript Type= protein_coding
chr14	55580317	55684579	55580317	55684579	+	ENST00000395314.7@KTN1	ENST00000395314.7	protein_coding	55580317,55612019,55616517,55617964,55619182,55627912,55629957,55633235,55634526,55636449,55637198,55637779,55639185,55639913,55640374,55640933,55641127,55641692,55646973,55648025,55648802,55649776,55650328,55650569,55651890,55652850,55653017,55653559,55656042,55658546,55659666,55661522,55663955,55667241,55670729,55671566,55671785,55672630,55672929,55673172,55675835,55678352,55679565,55684099	55580354,55612571,55616654,55618134,55619312,55628028,55630097,55633341,55634658,55636536,55637364,55637847,55639222,55640003,55640442,55640970,55641208,55641760,55647007,55648115,55648870,55649813,55650418,55650637,55651927,55652940,55653085,55653596,55656132,55658614,55659703,55661612,55664041,55667330,55670809,55671655,55671877,55672701,55673012,55673255,55675918,55678444,55679685,55684579	Gene ID= ENSG00000126777.17 TPM= 2.43 Transcript Type= protein_coding
chr14	55591583	55593437	55591583	55593437	-	transcript1541.chr14.nnic@NA	transcript1541.chr14.nnic	NA	55591583	55593437	Gene ID= novel_gene_chr14_1542 TPM= 3.19 Transcript Type= NA
chr14	57200507	57269008	57200507	57269008	-	ENST00000621441.4@EXOC5	ENST00000621441.4	protein_coding	57268622,57247618,57246711,57244165,57239595,57237338,57235711,57233988,57233743,57232667,57231506,57229734,57222308,57219322,57217982,57209953,57209567,57200507	57269008,57247712,57246858,57244359,57239659,57237366,57235820,57234032,57233883,57232749,57231715,57229881,57222416,57219442,57218068,57210061,57209782,57208797	Gene ID= ENSG00000070367.15 TPM= 19.12 Transcript Type= protein_coding
chr14	57239528	57268823	57239528	57268823	-	ENST00000554598.5@EXOC5	ENST00000554598.5	protein_coding	57268622,57247618,57246711,57244165,57239528	57268823,57247712,57246858,57244359,57239659	Gene ID= ENSG00000070367.15 TPM= 2.12 Transcript Type= retained_intron
chr14	57268891	57289517	57268891	57289517	+	transcript1563.chr14.nnic@AP5M1	transcript1563.chr14.nnic	protein_coding	57268891,57280195,57282089,57282934,57283112,57286223,57288802	57269069,57280422,57282228,57283019,57283230,57286319,57289517	Gene ID= ENSG00000053770.11 TPM= 2.12 Transcript Type= NA
chr14	57268935	57290074	57268935	57290074	+	transcript1565.chr14.nic@AP5M1	transcript1565.chr14.nic	protein_coding	57268935,57280195,57282089,57282934,57283112,57286223,57288802	57269388,57280422,57282228,57283019,57283230,57286319,57290074	Gene ID= ENSG00000053770.11 TPM= 7.44 Transcript Type= NA
chr14	57390587	57394128	57390587	57394128	+	transcript1584.chr14.nic@NAA30	transcript1584.chr14.nic	protein_coding	57390587,57390957	57390705,57394128	Gene ID= ENSG00000139977.13 TPM= 2.12 Transcript Type= NA
chr14	58096938	58152252	58096938	58152252	-	transcript1590.chr14.nic@C14orf37	transcript1590.chr14.nic	protein_coding	58152075,58137990,58133090,58131512,58096938	58152252,58139414,58133341,58131721,58096981	Gene ID= ENSG00000139971.15 TPM= 2.12 Transcript Type= NA
chr14	58116124	58152183	58116124	58152183	-	ENST00000334342.5@C14orf37	ENST00000334342.5	protein_coding	58152075,58137990,58133090,58131512,58116124	58152183,58139414,58133341,58131721,58116507	Gene ID= ENSG00000139971.15 TPM= 1.06 Transcript Type= processed_transcript
chr14	58200143	58234790	58200143	58234790	+	transcript1611.chr14.nnic@ACTR10	transcript1611.chr14.nnic	protein_coding	58200143,58202855,58207936,58208999,58211292,58213631,58215205,58223622,58223783,58230399,58232066,58234370	58200294,58202927,58208018,58209107,58211399,58213698,58215284,58223701,58223856,58230480,58232267,58234790	Gene ID= ENSG00000131966.13 TPM= 5.31 Transcript Type= NA
chr14	58200138	58235636	58200138	58235636	+	ENST00000254286.8@ACTR10	ENST00000254286.8	protein_coding	58200138,58202855,58207936,58208999,58211292,58213631,58215205,58219694,58223622,58223783,58230399,58232066,58234370	58200294,58202927,58208018,58209107,58211399,58213698,58215284,58219729,58223701,58223856,58230480,58232267,58235636	Gene ID= ENSG00000131966.13 TPM= 8.5 Transcript Type= protein_coding
chr14	58200080	58234760	58200080	58234760	+	ENST00000545307.6@ACTR10	ENST00000545307.6	protein_coding	58200080,58202855,58207936,58208999,58211292,58213641,58215205,58219694,58223622,58223783,58230399,58232066,58234370	58200294,58202927,58208018,58209107,58211410,58213698,58215284,58219729,58223701,58223856,58230480,58232267,58234760	Gene ID= ENSG00000131966.13 TPM= 31.86 Transcript Type= nonsense_mediated_decay
chr14	58244805	58272004	58244805	58272004	+	transcript1619.chr14.nic@PSMA3	transcript1619.chr14.nic	protein_coding	58244805,58247750,58252119,58257745,58257925,58260948,58263705,58267474,58270934,58271851	58244941,58247832,58252242,58257846,58257998,58261020,58263770,58270485,58270998,58272004	Gene ID= ENSG00000100567.12 TPM= 3.19 Transcript Type= NA
chr14	58244877	58272004	58244877	58272004	+	transcript1620.chr14.nic@PSMA3	transcript1620.chr14.nic	protein_coding	58244877,58247750,58257745,58257925,58260948,58263705,58267474,58270418,58270934,58271851	58244941,58247832,58257846,58257998,58261020,58263770,58267520,58270485,58270998,58272004	Gene ID= ENSG00000100567.12 TPM= 4.78 Transcript Type= NA
chr14	58244831	58272007	58244831	58272007	+	ENST00000216455.8@PSMA3	ENST00000216455.8	protein_coding	58244831,58247750,58252119,58257745,58257925,58260948,58263705,58267474,58270418,58270934,58271851	58244941,58247832,58252242,58257846,58257998,58261020,58263770,58267520,58270485,58270998,58272007	Gene ID= ENSG00000100567.12 TPM= 102.5 Transcript Type= protein_coding
chr14	58265460	58298129	58265460	58298129	-	transcript1629.chr14.nnic@PSMA3-AS1	transcript1629.chr14.nnic	antisense_RNA	58297955,58291635,58274097,58273979,58265460	58298129,58291707,58274135,58274010,58267393	Gene ID= ENSG00000257621.7 TPM= 2.12 Transcript Type= NA
chr14	58273932	58298132	58273932	58298132	-	transcript1637.chr14.nic@PSMA3-AS1	transcript1637.chr14.nic	antisense_RNA	58297955,58293766,58291635,58273932	58298132,58295811,58291707,58274135	Gene ID= ENSG00000257621.7 TPM= 4.25 Transcript Type= NA
chr14	58265365	58298129	58265365	58298129	-	transcript1639.chr14.nnic@PSMA3-AS1	transcript1639.chr14.nnic	antisense_RNA	58297955,58291635,58265365	58298129,58291707,58267393	Gene ID= ENSG00000257621.7 TPM= 6.37 Transcript Type= NA
chr14	58272401	58298129	58272401	58298129	-	ENST00000555707.5@PSMA3-AS1	ENST00000555707.5	antisense_RNA	58297955,58291635,58272401	58298129,58291707,58274135	Gene ID= ENSG00000257621.7 TPM= 7.44 Transcript Type= antisense_RNA
chr14	58298501	58359172	58298501	58359172	+	transcript1595.chr14.nic@ARID4A	transcript1595.chr14.nic	protein_coding	58298501,58299798,58301580,58304944,58306022,58318542,58318711,58323485,58328237,58329528,58330003,58344695,58346411,58347020,58347647,58351073,58353658,58359132	58298700,58299860,58301690,58305009,58306112,58318621,58318805,58323617,58328316,58329604,58330169,58344767,58346505,58347117,58347878,58351323,58353855,58359172	Gene ID= ENSG00000032219.18 TPM= 3.19 Transcript Type= NA
chr14	58299112	58351252	58299112	58351252	+	transcript1602.chr14.nic@ARID4A	transcript1602.chr14.nic	protein_coding	58299112,58299798,58301580,58304944,58306022,58318542,58318711,58323485,58328237,58329528,58330003,58344695,58346411,58347020,58347647,58351073	58299691,58299860,58301690,58305009,58306112,58318621,58318805,58323617,58328316,58329604,58330169,58344767,58346505,58347117,58347878,58351252	Gene ID= ENSG00000032219.18 TPM= 4.25 Transcript Type= NA
chr14	58326384	58329363	58326384	58329363	-	transcript1646.chr14.nnic@NA	transcript1646.chr14.nnic	NA	58326384	58329363	Gene ID= novel_gene_chr14_1647 TPM= 2.12 Transcript Type= NA
chr14	58408494	58427614	58408494	58427614	-	ENST00000395159.6@TIMM9	ENST00000395159.6	protein_coding	58427392,58427054,58424008,58411907,58410843,58408494	58427614,58427242,58424095,58411971,58410938,58409168	Gene ID= ENSG00000100575.13 TPM= 1.06 Transcript Type= protein_coding
chr14	58638056	58648321	58638056	58648321	+	ENST00000395153.7@DACT1	ENST00000395153.7	protein_coding	58638056,58640736,58641592,58645369	58638547,58640868,58641747,58648321	Gene ID= ENSG00000165617.14 TPM= 5.31 Transcript Type= protein_coding
chr14	59188663	59367547	59188663	59367547	+	transcript1663.chr14.nic@DAAM1	transcript1663.chr14.nic	protein_coding	59188663,59263441,59291217,59315280,59320490,59322892,59324128,59324351,59325664,59325960,59326510,59326933,59330501,59331209,59331813,59340074,59347539,59352526,59353876,59355165,59359397,59360802,59363651,59367429	59188768,59263660,59291306,59315351,59320584,59323225,59324238,59324454,59325730,59326077,59326648,59326991,59330688,59331508,59331920,59340180,59347623,59352632,59353964,59355333,59359504,59360862,59363782,59367547	Gene ID= ENSG00000100592.15 TPM= 3.8 Transcript Type= NA
chr14	59188712	59367547	59188712	59367547	+	transcript1665.chr14.nnic@DAAM1	transcript1665.chr14.nnic	protein_coding	59188712,59263441,59291217,59315280,59320490,59322892,59324128,59324351,59325664,59325960,59326510,59326933,59330501,59331209,59331813,59340074,59347539,59352526,59353876,59355165,59359397,59360802,59363651,59367429	59188914,59263660,59291306,59315351,59320584,59323225,59324238,59324454,59325730,59326077,59326648,59326991,59330688,59331508,59331920,59340180,59347623,59352632,59353964,59355333,59359504,59360862,59363782,59367547	Gene ID= ENSG00000100592.15 TPM= 2.74 Transcript Type= NA
chr14	59188646	59266161	59188646	59266161	+	ENST00000556596.1@DAAM1	ENST00000556596.1	protein_coding	59188646,59263441	59188768,59266161	Gene ID= ENSG00000100592.15 TPM= 3.19 Transcript Type= retained_intron
chr14	59188680	59369753	59188680	59369753	+	ENST00000360909.7@DAAM1	ENST00000360909.7	protein_coding	59188680,59263441,59291217,59315280,59320490,59322892,59324128,59324351,59325664,59325960,59326510,59326933,59330501,59331209,59331813,59340074,59347539,59352526,59353876,59355165,59359397,59360802,59363651,59367429,59368650	59188768,59263660,59291306,59315351,59320584,59323225,59324238,59324454,59325730,59326077,59326648,59326991,59330688,59331508,59331920,59340180,59347623,59352632,59353964,59355333,59359504,59360862,59363782,59367599,59369753	Gene ID= ENSG00000100592.15 TPM= 10.18 Transcript Type= protein_coding
chr14	59460765	59465342	59460765	59465342	-	ENST00000395116.1@GPR135	ENST00000395116.1	protein_coding	59460765	59465342	Gene ID= ENSG00000181619.11 TPM= 2.12 Transcript Type= protein_coding
chr14	59463088	59484437	59463088	59484437	-	transcript1685.chr14.nnic@L3HYPDH	transcript1685.chr14.nnic	protein_coding	59483809,59479182,59476092,59475869,59463088	59484437,59479351,59476214,59476006,59465727	Gene ID= ENSG00000126790.11 TPM= 4.25 Transcript Type= NA
chr14	59472617	59484430	59472617	59484430	-	ENST00000247194.8@L3HYPDH	ENST00000247194.8	protein_coding	59483809,59479182,59476092,59475869,59472617	59484430,59479351,59476214,59476006,59473090	Gene ID= ENSG00000126790.11 TPM= 8.5 Transcript Type= protein_coding
chr14	59484545	59504705	59484545	59504705	+	ENST00000554271.5@JKAMP	ENST00000554271.5	protein_coding	59484545,59486713,59487674,59495018,59498727,59501191,59503854	59485116,59486804,59487828,59495224,59498908,59501267,59504705	Gene ID= ENSG00000050130.17 TPM= 2.12 Transcript Type= protein_coding
chr14	59484514	59504705	59484514	59504705	+	transcript1679.chr14.nic@JKAMP	transcript1679.chr14.nic	protein_coding	59484514,59487674,59495018,59498727,59501191,59503854	59484593,59487828,59495224,59498908,59501267,59504705	Gene ID= ENSG00000050130.17 TPM= 2.12 Transcript Type= NA
chr14	59484503	59504703	59484503	59504703	+	ENST00000425728.6@JKAMP	ENST00000425728.6	protein_coding	59484503,59486731,59487674,59495018,59498727,59501191,59503854	59484593,59486804,59487828,59495224,59498908,59501267,59504703	Gene ID= ENSG00000050130.17 TPM= 8.5 Transcript Type= protein_coding
chr14	59595977	59870966	59595977	59870966	-	ENST00000267484.9@RTN1	ENST00000267484.9	protein_coding	59870390,59745708,59726919,59607285,59605368,59603852,59603212,59603065,59595977	59870966,59746481,59727668,59607492,59605506,59603921,59603258,59603123,59596787	Gene ID= ENSG00000139970.16 TPM= 1.06 Transcript Type= protein_coding
chr14	60091919	60134814	60091919	60134814	+	ENST00000406854.5@PCNX4	ENST00000406854.5	protein_coding	60091919,60107586,60114700,60114974,60115719,60115941,60118329,60121196,60124218,60125637,60133970	60092419,60108327,60114879,60115461,60115819,60116060,60118692,60121299,60125251,60125823,60134814	Gene ID= ENSG00000126773.12 TPM= 5.31 Transcript Type= protein_coding
chr14	60091911	60148221	60091911	60148221	+	ENST00000317623.8@PCNX4	ENST00000317623.8	protein_coding	60091911,60114700,60114974,60115719,60115941,60118329,60121196,60124218,60125637,60133970	60092419,60114879,60115461,60115819,60116060,60118692,60121299,60125251,60125823,60148221	Gene ID= ENSG00000126773.12 TPM= 3.19 Transcript Type= protein_coding
chr14	60091919	60111157	60091919	60111157	+	ENST00000391611.6@PCNX4	ENST00000391611.6	protein_coding	60091919,60107586	60092419,60111157	Gene ID= ENSG00000126773.12 TPM= 7.44 Transcript Type= protein_coding
chr14	60144784	60165429	60144784	60165429	-	ENST00000557185.5@DHRS7	ENST00000557185.5	protein_coding	60165177,60156000,60153959,60152939,60150065,60149353,60144784	60165429,60156152,60154065,60153178,60150187,60149568,60145013	Gene ID= ENSG00000100612.13 TPM= 88.16 Transcript Type= protein_coding
chr14	60148948	60165293	60148948	60165293	-	ENST00000554101.5@DHRS7	ENST00000554101.5	protein_coding	60165177,60156000,60153959,60152939,60150065,60148948	60165293,60156152,60154065,60153178,60150187,60149568	Gene ID= ENSG00000100612.13 TPM= 1.06 Transcript Type= protein_coding
chr14	60164674	60165397	60164674	60165397	-	transcript1710.chr14.nnic@NA	transcript1710.chr14.nnic	NA	60164674	60165397	Gene ID= novel_gene_chr14_1711 TPM= 2.12 Transcript Type= NA
chr14	60249276	60293355	60249276	60293355	+	transcript1719.chr14.nnic@PPM1A	transcript1719.chr14.nnic	protein_coding	60249276,60268293,60282684,60285624,60289806,60291397,60292453	60249677,60268435,60283537,60285741,60289914,60291454,60293355	Gene ID= ENSG00000100614.17 TPM= 3.72 Transcript Type= NA
chr14	60249224	60293355	60249224	60293355	+	transcript1727.chr14.nnic@PPM1A	transcript1727.chr14.nnic	protein_coding	60249224,60285624,60289806,60291397,60292453	60249677,60285741,60289914,60291454,60293355	Gene ID= ENSG00000100614.17 TPM= 12.21 Transcript Type= NA
chr14	60249231	60288555	60249231	60288555	+	transcript1732.chr14.nic@PPM1A	transcript1732.chr14.nic	protein_coding	60249231,60282684,60285624	60249677,60283537,60288555	Gene ID= ENSG00000100614.17 TPM= 9.56 Transcript Type= NA
chr14	60249268	60299087	60249268	60299087	+	ENST00000395076.8@PPM1A	ENST00000395076.8	protein_coding	60249268,60282684,60285624,60289806,60291397,60292453	60249677,60283537,60285741,60289914,60291454,60299087	Gene ID= ENSG00000100614.17 TPM= 27.62 Transcript Type= protein_coding
chr14	60918200	60924231	60918200	60924231	-	transcript1740.chr14.nnic@NA	transcript1740.chr14.nnic	NA	60918200	60924231	Gene ID= novel_gene_chr14_1741 TPM= 7.44 Transcript Type= NA
chr14	60971451	60981358	60971451	60981358	-	ENST00000261249.6@TRMT5	ENST00000261249.6	protein_coding	60980963,60979231,60977514,60975475,60971451	60981358,60979886,60977638,60976126,60975194	Gene ID= ENSG00000126814.6 TPM= 2.12 Transcript Type= protein_coding
chr14	60975016	60981163	60975016	60981163	-	transcript1744.chr14.nic@TRMT5	transcript1744.chr14.nic	protein_coding	60981024,60979231,60977514,60975475,60975016	60981163,60979886,60977638,60976126,60975194	Gene ID= ENSG00000126814.6 TPM= 3.19 Transcript Type= NA
chr14	60981226	61083733	60981226	61083733	+	ENST00000525723.6@SLC38A6	ENST00000525723.6	protein_coding	60981226,60982508,60984730,60987052,61015904,61019541,61030445,61034019,61037059,61037625,61043147,61043450,61045346,61046067,61050512,61051787,61052041,61052349,61078810,61083550	60981687,60982638,60984803,60987157,61015956,61019580,61030523,61034113,61037141,61037683,61043212,61043503,61045425,61046167,61050636,61051931,61052135,61052985,61078927,61083733	Gene ID= ENSG00000139974.15 TPM= 1.06 Transcript Type= nonsense_mediated_decay
chr14	61277979	61281808	61277979	61281808	-	transcript1753.chr14.nnic@NA	transcript1753.chr14.nnic	NA	61277979	61281808	Gene ID= novel_gene_chr14_1754 TPM= 4.25 Transcript Type= NA
chr14	61321717	61550976	61321717	61550976	+	ENST00000332981.9@PRKCH	ENST00000332981.9	protein_coding	61321717,61391225,61443111,61445692,61449164,61450842,61453226,61457176,61457506,61485502,61529075,61530407,61547743,61549685	61322464,61391288,61443261,61445726,61449252,61450971,61453353,61457319,61457679,61485656,61529213,61530595,61547886,61550976	Gene ID= ENSG00000027075.14 TPM= 7.44 Transcript Type= protein_coding
chr14	61329236	61331674	61329236	61331674	-	transcript1760.chr14.nnic@NA	transcript1760.chr14.nnic	NA	61329236	61331674	Gene ID= novel_gene_chr14_1761 TPM= 4.25 Transcript Type= NA
chr14	61695353	61738279	61695353	61738279	+	transcript1766.chr14.nic@HIF1A	transcript1766.chr14.nic	protein_coding	61695353,61720382,61721509,61721739,61726706,61727453,61732418,61734138,61736889,61738087	61695839,61720572,61721654,61721823,61726818,61727655,61732524,61734285,61737109,61738279	Gene ID= ENSG00000100644.16 TPM= 3.19 Transcript Type= NA
chr14	61695540	61748258	61695540	61748258	+	ENST00000394997.5@HIF1A	ENST00000394997.5	protein_coding	61695540,61720379,61721509,61721739,61726706,61727453,61732418,61734138,61736889,61738087,61740505,61740755,61744705,61745691,61746934	61695839,61720572,61721654,61721823,61726818,61727655,61732524,61734285,61737109,61738373,61740627,61741188,61744813,61745817,61748258	Gene ID= ENSG00000100644.16 TPM= 15.93 Transcript Type= protein_coding
chr14	61762357	61796428	61762357	61796428	+	ENST00000216294.4@SNAPC1	ENST00000216294.4	protein_coding	61762357,61766876,61767212,61768636,61776095,61778072,61778848,61782247,61792807,61794949	61762588,61767035,61767352,61768740,61776253,61778140,61778910,61782397,61792902,61796428	Gene ID= ENSG00000023608.4 TPM= 4.25 Transcript Type= protein_coding
chr14	63204408	63293219	63204408	63293219	+	ENST00000316754.7@RHOJ	ENST00000316754.7	protein_coding	63204408,63269110,63280971,63283121,63290878	63205047,63269168,63281135,63283216,63293219	Gene ID= ENSG00000126785.12 TPM= 5.31 Transcript Type= protein_coding
chr14	63270172	63272409	63270172	63272409	-	transcript1782.chr14.nnic@NA	transcript1782.chr14.nnic	NA	63270172	63272409	Gene ID= novel_gene_chr14_1783 TPM= 5.31 Transcript Type= NA
chr14	63382056	63543401	63382056	63543401	-	transcript1799.chr14.nic@PPP2R5E	transcript1799.chr14.nic	protein_coding	63542779,63539529,63453689,63421993,63415140,63396586,63395226,63393820,63391972,63391817,63389612,63384444,63382056	63543401,63539692,63453885,63422094,63415232,63396716,63395285,63393928,63392025,63391867,63389731,63384571,63382157	Gene ID= ENSG00000154001.13 TPM= 8.5 Transcript Type= NA
chr14	63597042	63641873	63597042	63641873	-	transcript1804.chr14.nnic@WDR89	transcript1804.chr14.nnic	protein_coding	63641804,63624928,63597042	63641873,63625033,63599973	Gene ID= ENSG00000140006.11 TPM= 4.25 Transcript Type= NA
chr14	63684214	63728039	63684214	63728039	-	ENST00000247225.6@SGPP1	ENST00000247225.6	protein_coding	63727261,63698569,63684214	63728039,63698658,63686656	Gene ID= ENSG00000126821.7 TPM= 12.75 Transcript Type= protein_coding
chr14	63700905	63701961	63700905	63701961	+	transcript1811.chr14.nnic@NA	transcript1811.chr14.nnic	NA	63700905	63701961	Gene ID= novel_gene_chr14_1812 TPM= 3.19 Transcript Type= NA
chr14	63852924	63995135	63852924	63995135	+	transcript1814.chr14.nnic@SYNE2	transcript1814.chr14.nnic	protein_coding	63852924,63909098,63940614,63941695,63941885,63942051,63949825,63954719,63961525,63963899,63967709,63976563,63977905,63978852,63980654,63980986,63982630,63983737,63986456,63990411,63990942,63993835,63995044	63853080,63909227,63940675,63941790,63941962,63942143,63950006,63954915,63961625,63964000,63967846,63976727,63978017,63979014,63980732,63981173,63982794,63983886,63986617,63990569,63991115,63993969,63995135	Gene ID= ENSG00000054654.16 TPM= 2.92 Transcript Type= NA
chr14	63852964	63995135	63852964	63995135	+	transcript1816.chr14.nic@SYNE2	transcript1816.chr14.nic	protein_coding	63852964,63909098,63940614,63941695,63941885,63942051,63949825,63954719,63961525,63963899,63967709,63976563,63977905,63978852,63980654,63980986,63982630,63983737,63986456,63990411,63990942,63993835,63995044	63853143,63909227,63940675,63941790,63941962,63942143,63950006,63954915,63961625,63964000,63967846,63976727,63978017,63979014,63980732,63981173,63982794,63983886,63986617,63990569,63991115,63993969,63995135	Gene ID= ENSG00000054654.16 TPM= 11.42 Transcript Type= NA
chr14	63852966	63995135	63852966	63995135	+	transcript1817.chr14.nnic@SYNE2	transcript1817.chr14.nnic	protein_coding	63852966,63909098,63940614,63941695,63941885,63942051,63949825,63954719,63961525,63963899,63967709,63976563,63977905,63978852,63980654,63980986,63982630,63983737,63986456,63990411,63990942,63993835,63995044	63853178,63909227,63940675,63941790,63941962,63942143,63950006,63954915,63961625,63964000,63967846,63976727,63978017,63979014,63980732,63981173,63982794,63983886,63986617,63990569,63991115,63993969,63995135	Gene ID= ENSG00000054654.16 TPM= 2.92 Transcript Type= NA
chr14	63853454	63995135	63853454	63995135	+	transcript1818.chr14.nnic@SYNE2	transcript1818.chr14.nnic	protein_coding	63853454,63909098,63940614,63941695,63941885,63942051,63949825,63954719,63961525,63963899,63967709,63976563,63977905,63978852,63980654,63980986,63982630,63983737,63986456,63990411,63990942,63993835,63995044	63853654,63909227,63940675,63941790,63941962,63942143,63950006,63954915,63961625,63964000,63967846,63976727,63978017,63979014,63980732,63981173,63982794,63983886,63986617,63990569,63991115,63993969,63995135	Gene ID= ENSG00000054654.16 TPM= 3.98 Transcript Type= NA
chr14	63854165	63857788	63854165	63857788	-	transcript1825.chr14.nnic@NA	transcript1825.chr14.nnic	NA	63854165	63857788	Gene ID= novel_gene_chr14_1826 TPM= 2.12 Transcript Type= NA
chr14	64388350	64460004	64388350	64460004	+	ENST00000216605.12@MTHFD1	ENST00000216605.12	protein_coding	64388350,64400793,64411090,64412472,64415358,64415639,64417888,64419814,64424804,64425730,64426019,64427337,64430184,64431532,64431787,64435569,64439096,64440126,64441385,64442054,64442263,64444693,64448217,64449445,64453754,64454723,64458214,64459759	64388468,64400877,64411149,64412525,64415494,64415739,64418024,64419925,64424931,64425827,64426192,64427473,64430230,64431639,64431861,64435671,64439172,64440266,64441453,64442165,64442402,64444734,64448317,64449622,64453861,64454875,64458307,64460004	Gene ID= ENSG00000100714.15 TPM= 107.28 Transcript Type= protein_coding
chr14	64444299	64446614	64444299	64446614	+	transcript1856.chr14.nnic@NA	transcript1856.chr14.nnic	NA	64444299	64446614	Gene ID= novel_gene_chr14_1857 TPM= 3.19 Transcript Type= NA
chr14	64486400	64503630	64486400	64503630	-	transcript1844.chr14.nnic@ZBTB25	transcript1844.chr14.nnic	protein_coding	64503557,64502901,64490361,64486400	64503630,64503127,64490540,64488057	Gene ID= ENSG00000089775.11 TPM= 2.12 Transcript Type= NA
chr14	64485495	64500476	64485495	64500476	-	transcript1845.chr14.nnic@ZBTB25	transcript1845.chr14.nnic	protein_coding	64499441,64490361,64485495	64500476,64490540,64488059	Gene ID= ENSG00000089775.11 TPM= 7.44 Transcript Type= NA
chr14	64449106	64505213	64449106	64505213	-	ENST00000555220.5@ZBTB25	ENST00000555220.5	protein_coding	64504487,64490361,64449106	64505213,64490540,64449638	Gene ID= ENSG00000089775.11 TPM= 1.06 Transcript Type= protein_coding
chr14	64485495	64500476	64485495	64500476	+	transcript1840.chr14.nnic@NA	transcript1840.chr14.nnic	NA	64485495,64490361,64495830,64499441	64488059,64490540,64495952,64500476	Gene ID= novel_gene_chr14_1841 TPM= 6.37 Transcript Type= NA
chr14	64503903	64523950	64503903	64523950	+	transcript1853.chr14.nic@ZBTB1	transcript1853.chr14.nic	protein_coding	64503903,64521487	64504946,64523950	Gene ID= ENSG00000126804.13 TPM= 7.44 Transcript Type= NA
chr14	64504643	64524641	64504643	64524641	+	transcript1854.chr14.nic@ZBTB1	transcript1854.chr14.nic	protein_coding	64504643,64521487	64504946,64524641	Gene ID= ENSG00000126804.13 TPM= 6.37 Transcript Type= NA
chr14	64540468	64543234	64540468	64543234	+	ENST00000247207.6@HSPA2	ENST00000247207.6	protein_coding	64540468	64543234	Gene ID= ENSG00000126803.9 TPM= 452.48 Transcript Type= protein_coding
chr14	64540741	64546170	64540741	64546170	+	transcript1858.chr14.nnic@NA	transcript1858.chr14.nnic	NA	64540741	64546170	Gene ID= novel_gene_chr14_1859 TPM= 2.12 Transcript Type= NA
chr14	64738015	64744343	64738015	64744343	+	ENST00000471182.6@PLEKHG3	ENST00000471182.6	protein_coding	64738015,64738742,64741036,64742982	64738224,64738855,64742455,64744343	Gene ID= ENSG00000126822.16 TPM= 9.56 Transcript Type= protein_coding
chr14	64766399	64879923	64766399	64879923	-	transcript1864.chr14.nic@SPTB	transcript1864.chr14.nic	protein_coding	64879792,64822947,64804939,64803607,64802226,64801754,64801285,64800756,64799747,64797729,64796557,64795337,64794467,64792997,64791719,64786404,64785749,64785537,64784247,64782290,64779725,64779157,64775125,64774397,64773220,64772580,64770885,64769590,64769034,64767663,64767303,64766399	64879923,64823145,64805090,64803780,64802317,64801834,64801400,64800868,64799934,64797846,64796715,64795639,64794617,64793867,64791856,64787160,64785951,64785627,64784393,64782553,64779931,64779246,64775403,64774527,64773424,64772954,64771129,64769728,64769118,64767859,64767352,64766801	Gene ID= ENSG00000070182.19 TPM= 27.62 Transcript Type= NA
chr14	64789863	64797497	64789863	64797497	-	transcript1867.chr14.nic@SPTB	transcript1867.chr14.nic	protein_coding	64796557,64795337,64794467,64792997,64789863	64797497,64795639,64794617,64793867,64791856	Gene ID= ENSG00000070182.19 TPM= 35.05 Transcript Type= NA
chr14	64746638	64746903	64746638	64746903	+	transcript1870.chr14.nnic@NA	transcript1870.chr14.nnic	NA	64746638	64746903	Gene ID= novel_gene_chr14_1871 TPM= 2.12 Transcript Type= NA
chr14	64868649	64870324	64868649	64870324	+	transcript1872.chr14.nnic@NA	transcript1872.chr14.nnic	NA	64868649	64870324	Gene ID= novel_gene_chr14_1873 TPM= 2.12 Transcript Type= NA
chr14	64914361	64934385	64914361	64934385	+	ENST00000549115.5@CHURC1	ENST00000549115.5	protein_coding	64914361,64923991,64926010,64932138	64914534,64924126,64926080,64934385	Gene ID= ENSG00000258289.8 TPM= 105.15 Transcript Type= protein_coding
chr14	64914361	64935368	64914361	64935368	+	ENST00000607599.5@CHURC1	ENST00000607599.5	protein_coding	64914361,64923991,64926007,64932138	64914534,64924126,64926080,64935368	Gene ID= ENSG00000258289.8 TPM= 8.5 Transcript Type= protein_coding
chr14	64914415	64932320	64914415	64932320	+	ENST00000548752.6@CHURC1	ENST00000548752.6	protein_coding	64914415,64923991,64932138	64914534,64924126,64932320	Gene ID= ENSG00000258289.8 TPM= 5.31 Transcript Type= protein_coding
chr14	64945816	64972414	64945816	64972414	-	ENST00000533601.6@RAB15	ENST00000533601.6	protein_coding	64971953,64952511,64951603,64951074,64950325,64948668,64945816	64972414,64952571,64951663,64951151,64950414,64948733,64948512	Gene ID= ENSG00000139998.14 TPM= 35.76 Transcript Type= protein_coding
chr14	64945814	64972157	64945814	64972157	-	ENST00000267512.9@RAB15	ENST00000267512.9	protein_coding	64971953,64952511,64951603,64950943,64950325,64948668,64945814	64972157,64952571,64951663,64951151,64950414,64948733,64948512	Gene ID= ENSG00000139998.14 TPM= 60.19 Transcript Type= protein_coding
chr14	64945816	64949758	64945816	64949758	-	transcript1893.chr14.nic@RAB15	transcript1893.chr14.nic	protein_coding	64948668,64945816	64949758,64948512	Gene ID= ENSG00000139998.14 TPM= 28.33 Transcript Type= NA
chr14	65067794	65102539	65067794	65102539	-	transcript1900.chr14.nnic@MAX	transcript1900.chr14.nnic	protein_coding	65102304,65101546,65093708,65067794	65102539,65101572,65093815,65070369	Gene ID= ENSG00000125952.18 TPM= 2.12 Transcript Type= NA
chr14	65075124	65102504	65075124	65102504	-	ENST00000358402.8@MAX	ENST00000358402.8	protein_coding	65102304,65093708,65077913,65075124	65102504,65093815,65078036,65076663	Gene ID= ENSG00000125952.18 TPM= 5.31 Transcript Type= protein_coding
chr14	65075544	65102470	65075544	65102470	-	ENST00000358664.8@MAX	ENST00000358664.8	protein_coding	65102304,65101546,65093708,65077913,65075544	65102470,65101572,65093815,65078036,65076663	Gene ID= ENSG00000125952.18 TPM= 2.12 Transcript Type= protein_coding
chr14	65083744	65102509	65083744	65102509	-	ENST00000246163.2@MAX	ENST00000246163.2	protein_coding	65102304,65101546,65093708,65083744	65102509,65101572,65093815,65084299	Gene ID= ENSG00000125952.18 TPM= 3.19 Transcript Type= protein_coding
chr14	65410592	65744121	65410592	65744121	+	ENST00000360689.9@FUT8	ENST00000360689.9	protein_coding	65410592,65455621,65561337,65615978,65616211,65629492,65669243,65721775,65724147,65733231,65742093	65411993,65455718,65561766,65616093,65616373,65629606,65669480,65722021,65724323,65733381,65744121	Gene ID= ENSG00000033170.16 TPM= 4.25 Transcript Type= protein_coding
chr14	65413014	65743142	65413014	65743142	+	transcript1906.chr14.nic@FUT8	transcript1906.chr14.nic	protein_coding	65413014,65455621,65561337,65615978,65616211,65629492,65669243,65721775,65724147,65733231,65742093	65413214,65455718,65561766,65616093,65616373,65629606,65669480,65722021,65724323,65733381,65743142	Gene ID= ENSG00000033170.16 TPM= 2.12 Transcript Type= NA
chr14	66507407	67181803	66507407	67181803	+	ENST00000478722.5@GPHN	ENST00000478722.5	protein_coding	66507407,66681107,66776464,66824474,66879939,66916003,66922666,66924194,66965191,67023633,67058649,67088983,67100856,67110140,67111861,67113018,67122256,67143362,67159415,67165162,67168933,67179578,67180804	66508591,66681185,66776521,66824566,66880033,66916069,66922938,66924292,66965325,67023675,67058786,67089075,67100911,67110259,67111919,67113171,67122377,67143449,67159488,67165226,67169036,67179674,67181803	Gene ID= ENSG00000171723.15 TPM= 17.53 Transcript Type= protein_coding
chr14	66508162	66950018	66508162	66950018	+	transcript1915.chr14.nnic@GPHN	transcript1915.chr14.nnic	protein_coding	66508162,66681107,66776464,66916003,66922666,66924194,66948174	66508591,66681185,66776521,66916069,66922938,66924292,66950018	Gene ID= ENSG00000171723.15 TPM= 2.66 Transcript Type= NA
chr14	67241109	67335819	67241109	67335819	+	ENST00000261681.8@MPP5	ENST00000261681.8	protein_coding	67241109,67269701,67279018,67292511,67301389,67301972,67302410,67303522,67312527,67316832,67317408,67320230,67321057,67323702,67332780	67241533,67269783,67279537,67292719,67301466,67302118,67302571,67303599,67312710,67316903,67317479,67320397,67321259,67323812,67335819	Gene ID= ENSG00000072415.8 TPM= 5.84 Transcript Type= protein_coding
chr14	67241423	67335819	67241423	67335819	+	ENST00000555925.5@MPP5	ENST00000555925.5	protein_coding	67241423,67269701,67279250,67292511,67301389,67301972,67302410,67303522,67312527,67316832,67317408,67320230,67321057,67323702,67332780	67241533,67269783,67279537,67292719,67301466,67302118,67302571,67303599,67312710,67316903,67317479,67320397,67321259,67323812,67335819	Gene ID= ENSG00000072415.8 TPM= 3.72 Transcript Type= protein_coding
chr14	67338071	67360249	67338071	67360249	-	ENST00000216442.11@ATP6V1D	ENST00000216442.11	protein_coding	67359658,67352923,67350611,67349037,67347409,67345768,67343372,67340440,67338071	67360249,67353040,67350690,67349104,67347453,67345871,67343438,67340518,67338762	Gene ID= ENSG00000100554.11 TPM= 108.34 Transcript Type= protein_coding
chr14	67359997	67386516	67359997	67386516	+	ENST00000256383.8@EIF2S1	ENST00000256383.8	protein_coding	67359997,67364767,67374468,67376439,67380659,67381593,67382447,67383315	67360456,67365008,67374547,67376590,67380765,67381690,67382590,67386516	Gene ID= ENSG00000134001.12 TPM= 112.59 Transcript Type= protein_coding
chr14	67646905	67650404	67646905	67650404	-	transcript1946.chr14.nnic@NA	transcript1946.chr14.nnic	NA	67646905	67650404	Gene ID= novel_gene_chr14_1947 TPM= 7.44 Transcript Type= NA
chr14	67651149	67674616	67651149	67674616	-	transcript1942.chr14.nic@VTI1B	transcript1942.chr14.nic	protein_coding	67674375,67659731,67656416,67653437,67651149	67674616,67659922,67656589,67653498,67651481	Gene ID= ENSG00000100568.10 TPM= 10.09 Transcript Type= NA
chr14	67676801	67695814	67676801	67695814	-	ENST00000381346.8@RDH11	ENST00000381346.8	protein_coding	67695630,67692934,67692438,67691140,67690212,67685015,67676801	67695814,67693052,67692593,67691244,67690421,67685204,67678423	Gene ID= ENSG00000072042.12 TPM= 2.12 Transcript Type= protein_coding
chr14	68549411	68551330	68549411	68551330	-	transcript1959.chr14.nnic@NA	transcript1959.chr14.nnic	NA	68549411	68551330	Gene ID= novel_gene_chr14_1960 TPM= 3.19 Transcript Type= NA
chr14	68787932	68788724	68787932	68788724	-	transcript1966.chr14.nnic@NA	transcript1966.chr14.nnic	NA	68787932	68788724	Gene ID= novel_gene_chr14_1967 TPM= 2.12 Transcript Type= NA
chr14	68874143	68979440	68874143	68979440	-	ENST00000193403.10@ACTN1	ENST00000193403.10	protein_coding	68978952,68925558,68921006,68912156,68909955,68909318,68904655,68902477,68893655,68892053,68890139,68885425,68884775,68884168,68882873,68882458,68880810,68879962,68878989,68877082,68874143	68979440,68925672,68921125,68912242,68910042,68909396,68904736,68902562,68893747,68892283,68890286,68885575,68884883,68884308,68883055,68882592,68880989,68880108,68879069,68877240,68875017	Gene ID= ENSG00000072110.13 TPM= 16.5 Transcript Type= protein_coding
chr14	68901239	68979350	68901239	68979350	-	transcript2000.chr14.nic@ACTN1	transcript2000.chr14.nic	protein_coding	68978952,68925558,68921006,68912156,68909955,68909318,68904655,68901239	68979350,68925672,68921125,68912242,68910042,68909396,68904736,68902562	Gene ID= ENSG00000072110.13 TPM= 20.31 Transcript Type= NA
chr14	68874686	68979262	68874686	68979262	-	ENST00000438964.6@ACTN1	ENST00000438964.6	protein_coding	68978952,68925558,68921006,68912156,68909955,68909318,68904655,68902477,68893655,68892053,68890139,68885425,68884775,68884168,68882873,68882458,68880810,68879962,68878458,68877082,68874686	68979262,68925672,68921125,68912242,68910042,68909396,68904736,68902562,68893747,68892283,68890286,68885575,68884883,68884308,68883055,68882592,68880989,68880108,68878523,68877240,68875017	Gene ID= ENSG00000072110.13 TPM= 129.18 Transcript Type= protein_coding
chr14	68886971	68890654	68886971	68890654	-	transcript2013.chr14.nnic@NA	transcript2013.chr14.nnic	NA	68886971	68890654	Gene ID= novel_gene_chr14_2014 TPM= 6.37 Transcript Type= NA
chr14	68901441	68905997	68901441	68905997	+	transcript2007.chr14.nnic@NA	transcript2007.chr14.nnic	NA	68901441	68905997	Gene ID= novel_gene_chr14_2008 TPM= 6.37 Transcript Type= NA
chr14	68923073	68923651	68923073	68923651	+	transcript2005.chr14.nnic@NA	transcript2005.chr14.nnic	NA	68923073	68923651	Gene ID= novel_gene_chr14_2006 TPM= 3.19 Transcript Type= NA
chr14	68958539	68960763	68958539	68960763	+	transcript2011.chr14.nnic@NA	transcript2011.chr14.nnic	NA	68958539	68960763	Gene ID= novel_gene_chr14_2012 TPM= 3.19 Transcript Type= NA
chr14	68980116	68981732	68980116	68981732	+	transcript2016.chr14.nnic@NA	transcript2016.chr14.nnic	NA	68980116	68981732	Gene ID= novel_gene_chr14_2017 TPM= 2.12 Transcript Type= NA
chr14	69053802	69152609	69053802	69152609	-	ENST00000556847.5@DCAF5	ENST00000556847.5	protein_coding	69152489,69122217,69119194,69118139,69116366,69091674,69075345,69062384,69053802	69152609,69122360,69119230,69118278,69116495,69091887,69075411,69062511,69055611	Gene ID= ENSG00000139990.17 TPM= 4.43 Transcript Type= protein_coding
chr14	69053802	69153163	69053802	69153163	-	transcript2024.chr14.nic@DCAF5	transcript2024.chr14.nic	protein_coding	69152944,69122217,69119194,69118139,69116366,69091674,69075345,69062384,69053802	69153163,69122360,69119230,69118278,69116495,69091887,69075411,69062511,69055611	Gene ID= ENSG00000139990.17 TPM= 12.93 Transcript Type= NA
chr14	69053825	69153003	69053825	69153003	-	ENST00000557386.5@DCAF5	ENST00000557386.5	protein_coding	69152765,69122217,69119194,69118139,69116366,69091674,69075345,69062384,69053825	69153003,69122360,69119230,69118275,69116495,69091887,69075411,69062511,69055611	Gene ID= ENSG00000139990.17 TPM= 16.64 Transcript Type= protein_coding
chr14	69191522	69242358	69191522	69242358	+	transcript2032.chr14.nic@EXD2	transcript2032.chr14.nic	protein_coding	69191522,69203917,69209424,69228816,69230472,69234700,69236046,69236407,69237575,69240884	69191591,69204000,69209803,69229072,69230598,69235031,69236152,69236542,69237931,69242358	Gene ID= ENSG00000081177.18 TPM= 11.15 Transcript Type= NA
chr14	69191511	69242358	69191511	69242358	+	ENST00000409018.7@EXD2	ENST00000409018.7	protein_coding	69191511,69209424,69228816,69230472,69234700,69236046,69236407,69237575,69240884	69191591,69209803,69229072,69230598,69235031,69236152,69236542,69237931,69242358	Gene ID= ENSG00000081177.18 TPM= 10.09 Transcript Type= protein_coding
chr14	69259964	69357033	69259964	69357033	+	ENST00000337827.8@GALNT16	ENST00000337827.8	protein_coding	69259964,69320711,69324692,69325337,69325962,69328450,69331464,69333085,69333497,69338651,69339527,69341681,69347040,69347877,69352031,69353332	69260467,69320868,69324790,69325404,69326027,69328571,69331551,69333169,69333600,69338777,69339619,69341764,69347181,69348002,69352170,69357033	Gene ID= ENSG00000100626.16 TPM= 5.31 Transcript Type= protein_coding
chr14	69264821	69265609	69264821	69265609	-	transcript2049.chr14.nnic@NA	transcript2049.chr14.nnic	NA	69264821	69265609	Gene ID= novel_gene_chr14_2050 TPM= 2.12 Transcript Type= NA
chr14	69356556	69359221	69356556	69359221	-	transcript2051.chr14.nnic@NA	transcript2051.chr14.nnic	NA	69356556	69359221	Gene ID= novel_gene_chr14_2052 TPM= 2.12 Transcript Type= NA
chr14	69380127	69398341	69380127	69398341	-	transcript2053.chr14.nnic@ERH	transcript2053.chr14.nnic	protein_coding	69398231,69394825,69386963,69380577,69380127	69398341,69394912,69387083,69380640,69380482	Gene ID= ENSG00000100632.10 TPM= 3.19 Transcript Type= NA
chr14	69380123	69398627	69380123	69398627	-	ENST00000557016.5@ERH	ENST00000557016.5	protein_coding	69398231,69394825,69386963,69380123	69398627,69394912,69387083,69380640	Gene ID= ENSG00000100632.10 TPM= 37.18 Transcript Type= protein_coding
chr14	69398692	69462381	69398692	69462381	+	ENST00000031146.8@SLC39A9	ENST00000031146.8	protein_coding	69398692,69424094,69453241,69454812,69455732,69458363	69399465,69424202,69453309,69454897,69455866,69462381	Gene ID= ENSG00000029364.11 TPM= 29.74 Transcript Type= protein_coding
chr14	69611908	69715142	69611908	69715142	+	transcript2063.chr14.nnic@SUSD6	transcript2063.chr14.nnic	protein_coding	69611908,69658513,69703395,69704604,69708677,69710954	69612200,69658713,69703592,69704742,69709104,69715142	Gene ID= ENSG00000100647.7 TPM= 2.12 Transcript Type= NA
chr14	69611596	69715142	69611596	69715142	+	ENST00000342745.4@SUSD6	ENST00000342745.4	protein_coding	69611596,69658513,69703395,69704604,69708677,69710954	69611828,69658713,69703592,69704742,69709104,69715142	Gene ID= ENSG00000100647.7 TPM= 27.62 Transcript Type= protein_coding
chr14	69726900	69772004	69726900	69772004	+	ENST00000553521.5@SRSF5	ENST00000553521.5	protein_coding	69726900,69766114,69768138,69768604,69768798,69769182,69770467,69770995,69771194	69727191,69767255,69768282,69768674,69768896,69769251,69770540,69771105,69772004	Gene ID= ENSG00000100650.15 TPM= 36.64 Transcript Type= protein_coding
chr14	69767092	69772004	69767092	69772004	+	transcript2078.chr14.nic@SRSF5	transcript2078.chr14.nic	protein_coding	69767092,69768138,69768604,69768798,69769182,69770995,69771194	69767251,69768282,69768674,69768896,69770540,69771105,69772004	Gene ID= ENSG00000100650.15 TPM= 21.95 Transcript Type= NA
chr14	69767093	69772004	69767093	69772004	+	ENST00000554465.5@SRSF5	ENST00000554465.5	protein_coding	69767093,69768138,69768604,69768798,69770995,69771194	69767255,69768282,69768674,69770540,69771105,69772004	Gene ID= ENSG00000100650.15 TPM= 7.97 Transcript Type= retained_intron
chr14	69767172	69771642	69767172	69771642	+	ENST00000556184.5@SRSF5	ENST00000556184.5	protein_coding	69767172,69768138,69768604,69768798,69769182,69770995,69771194	69767380,69768282,69768674,69768896,69770540,69771105,69771642	Gene ID= ENSG00000100650.15 TPM= 3.72 Transcript Type= retained_intron
chr14	69767124	69771991	69767124	69771991	+	ENST00000557154.5@SRSF5	ENST00000557154.5	protein_coding	69767124,69768138,69768604,69768798,69769182,69770467,69770995,69771194	69767255,69768282,69768674,69768896,69769251,69770540,69771105,69771991	Gene ID= ENSG00000100650.15 TPM= 2.12 Transcript Type= protein_coding
chr14	69767093	69771973	69767093	69771973	+	ENST00000394366.6@SRSF5	ENST00000394366.6	protein_coding	69767093,69768138,69768604,69768798,69769182,69770467,69770995,69771194	69767380,69768282,69768674,69768896,69769251,69770540,69771105,69771973	Gene ID= ENSG00000100650.15 TPM= 5.31 Transcript Type= protein_coding
chr14	69774013	69774926	69774013	69774926	-	transcript2094.chr14.nnic@NA	transcript2094.chr14.nnic	NA	69774013	69774926	Gene ID= novel_gene_chr14_2095 TPM= 3.19 Transcript Type= NA
chr14	70325081	70359731	70325081	70359731	-	ENST00000389912.6@COX16	ENST00000389912.6	protein_coding	70359519,70342658,70329174,70325081	70359731,70342729,70329236,70326449	Gene ID= ENSG00000133983.14 TPM= 5.31 Transcript Type= protein_coding
chr14	70326068	70359700	70326068	70359700	-	ENST00000557612.5@COX16	ENST00000557612.5	protein_coding	70359519,70329174,70326068	70359700,70329236,70326449	Gene ID= ENSG00000133983.14 TPM= 2.12 Transcript Type= processed_transcript
chr14	70366496	70417045	70366496	70417045	-	ENST00000256366.5@SYNJ2BP	ENST00000256366.5	protein_coding	70416900,70388470,70375676,70366496	70417045,70388606,70375771,70373131	Gene ID= ENSG00000213463.4 TPM= 20.18 Transcript Type= protein_coding
chr14	70533571	70536494	70533571	70536494	+	transcript2109.chr14.nnic@NA	transcript2109.chr14.nnic	NA	70533571	70536494	Gene ID= novel_gene_chr14_2110 TPM= 9.56 Transcript Type= NA
chr14	70641787	70675360	70641787	70675360	+	ENST00000256367.2@TTC9	ENST00000256367.2	protein_coding	70641787,70667564,70671076	70642535,70667746,70675360	Gene ID= ENSG00000133985.2 TPM= 4.25 Transcript Type= protein_coding
chr14	70809861	70815396	70809861	70815396	+	transcript2117.chr14.nnic@AC004816.1	transcript2117.chr14.nnic	lincRNA	70809861,70815111	70810674,70815396	Gene ID= ENSG00000259153.1 TPM= 2.12 Transcript Type= NA
chr14	70822004	70823984	70822004	70823984	+	ENST00000622856.1@AC004816.2	ENST00000622856.1	lincRNA	70822004,70823820	70822122,70823984	Gene ID= ENSG00000275630.1 TPM= 1.06 Transcript Type= lincRNA
chr14	70906655	70908676	70906655	70908676	-	transcript2121.chr14.nnic@NA	transcript2121.chr14.nnic	NA	70906655	70908676	Gene ID= novel_gene_chr14_2122 TPM= 13.81 Transcript Type= NA
chr14	71932310	71966989	71932310	71966989	+	transcript2129.chr14.nic@RGS6	transcript2129.chr14.nic	protein_coding	71932310,71964772	71932941,71966989	Gene ID= ENSG00000182732.16 TPM= 5.31 Transcript Type= NA
chr14	72255049	72257641	72255049	72257641	+	transcript2135.chr14.nnic@NA	transcript2135.chr14.nnic	NA	72255049	72257641	Gene ID= novel_gene_chr14_2136 TPM= 2.12 Transcript Type= NA
chr14	72609030	72612929	72609030	72612929	-	transcript2141.chr14.nnic@NA	transcript2141.chr14.nnic	NA	72609030	72612929	Gene ID= novel_gene_chr14_2142 TPM= 14.87 Transcript Type= NA
chr14	72612493	72614787	72612493	72614787	+	transcript2137.chr14.nnic@NA	transcript2137.chr14.nnic	NA	72612493	72614787	Gene ID= novel_gene_chr14_2138 TPM= 59.48 Transcript Type= NA
chr14	72661043	72894116	72661043	72894116	-	ENST00000614862.4@DPF3	ENST00000614862.4	protein_coding	72894057,72879804,72771733,72753264,72731807,72723633,72714423,72693076,72674240,72669952,72661043	72894116,72879947,72771893,72753371,72731934,72723728,72714501,72693213,72674368,72671338,72662833	Gene ID= ENSG00000205683.11 TPM= 3.01 Transcript Type= protein_coding
chr14	72661043	72894116	72661043	72894116	-	ENST00000541685.5@DPF3	ENST00000541685.5	protein_coding	72894057,72771733,72753264,72731807,72723633,72714423,72693076,72674240,72669952,72661043	72894116,72771893,72753371,72731934,72723728,72714501,72693213,72674368,72671338,72662833	Gene ID= ENSG00000205683.11 TPM= 3.01 Transcript Type= protein_coding
chr14	72661876	72894101	72661876	72894101	-	ENST00000381216.8@DPF3	ENST00000381216.8	protein_coding	72894057,72771733,72753264,72731807,72723633,72714423,72693076,72674240,72669952,72661876	72894101,72771893,72753371,72731934,72723728,72714501,72693213,72674368,72671338,72662833	Gene ID= ENSG00000205683.11 TPM= 3.54 Transcript Type= nonsense_mediated_decay
chr14	72840114	72842104	72840114	72842104	+	transcript2149.chr14.nnic@NA	transcript2149.chr14.nnic	NA	72840114	72842104	Gene ID= novel_gene_chr14_2150 TPM= 4.25 Transcript Type= NA
chr14	72926487	72959644	72926487	72959644	+	ENST00000555042.5@DCAF4	ENST00000555042.5	protein_coding	72926487,72937971,72939802,72940220,72941745,72942994,72945884,72947142,72951798,72954161,72954386,72955523,72956386,72958612	72926543,72938070,72939902,72940377,72941824,72943096,72946027,72947191,72951877,72954262,72954462,72955696,72956500,72959644	Gene ID= ENSG00000119599.16 TPM= 4.25 Transcript Type= protein_coding
chr14	72940593	72942685	72940593	72942685	-	transcript2155.chr14.nnic@NA	transcript2155.chr14.nnic	NA	72940593	72942685	Gene ID= novel_gene_chr14_2156 TPM= 2.12 Transcript Type= NA
chr14	72969452	73027212	72969452	73027212	-	ENST00000556143.5@ZFYVE1	ENST00000556143.5	protein_coding	73026926,73024026,72997811,72993143,72981789,72978861,72978137,72977927,72975551,72974779,72974080,72969452	73027212,73024942,72998315,72993357,72981895,72978969,72978234,72978044,72975721,72974959,72974193,72971114	Gene ID= ENSG00000165861.13 TPM= 20.18 Transcript Type= protein_coding
chr14	73058436	73123898	73058436	73123898	+	ENST00000261973.11@RBM25	ENST00000261973.11	protein_coding	73058436,73071627,73076319,73077369,73083494,73088001,73096915,73099380,73099667,73103192,73105859,73106196,73107826,73109342,73110831,73111528,73112152,73114286,73119713	73058705,73071747,73076368,73077536,73083551,73088161,73097100,73099433,73099750,73103478,73106081,73106285,73107899,73109492,73111155,73111802,73112250,73114333,73123898	Gene ID= ENSG00000119707.13 TPM= 4.25 Transcript Type= protein_coding
chr14	73058532	73120391	73058532	73120391	+	ENST00000527432.5@RBM25	ENST00000527432.5	protein_coding	73058532,73069853,73071627,73076319,73077369,73083494,73088001,73096915,73099380,73099667,73103192,73105859,73106196,73107826,73109342,73110831,73111528,73112152,73114286,73119713	73058705,73069920,73071747,73076368,73077536,73083551,73088161,73097100,73099433,73099750,73103478,73106081,73106285,73107899,73109492,73111155,73111802,73112250,73114333,73120391	Gene ID= ENSG00000119707.13 TPM= 1.06 Transcript Type= protein_coding
chr14	73136447	73220401	73136447	73220401	+	ENST00000357710.8@PSEN1	ENST00000357710.8	protein_coding	73136447,73147795,73147967,73170797,73173566,73186853,73192644,73198031,73206386,73211769,73217126,73219134	73136583,73147876,73148094,73171047,73173707,73186920,73192864,73198129,73206472,73211942,73217244,73220401	Gene ID= ENSG00000080815.18 TPM= 15.93 Transcript Type= protein_coding
chr14	73136447	73223691	73136447	73223691	+	ENST00000324501.9@PSEN1	ENST00000324501.9	protein_coding	73136447,73147795,73147967,73170797,73173566,73186853,73192644,73198031,73206386,73211769,73217126,73219134	73136583,73147876,73148106,73171047,73173707,73186920,73192864,73198129,73206472,73211942,73217244,73223691	Gene ID= ENSG00000080815.18 TPM= 14.87 Transcript Type= protein_coding
chr14	73242651	73245979	73242651	73245979	-	ENST00000554614.2@AC004846.1	ENST00000554614.2	antisense_RNA	73245524,73242651	73245979,73245244	Gene ID= ENSG00000258376.2 TPM= 1.06 Transcript Type= antisense_RNA
chr14	73275107	73458617	73275107	73458617	-	ENST00000554546.5@NUMB	ENST00000554546.5	protein_coding	73458493,73409937,73366897,73355626,73323130,73297211,73292734,73287110,73284081,73282359,73275107	73458617,73410068,73366981,73355766,73323204,73297285,73292874,73287314,73284374,73282505,73277293	Gene ID= ENSG00000133961.19 TPM= 4.25 Transcript Type= protein_coding
chr14	73275996	73458590	73275996	73458590	-	transcript2186.chr14.nic@NUMB	transcript2186.chr14.nic	protein_coding	73458493,73409937,73355626,73323130,73316390,73297211,73292734,73287110,73284081,73282359,73275996	73458590,73410068,73355766,73323204,73316422,73297285,73292874,73287314,73284374,73282505,73277293	Gene ID= ENSG00000133961.19 TPM= 2.12 Transcript Type= NA
chr14	73275107	73458590	73275107	73458590	-	transcript2187.chr14.nic@NUMB	transcript2187.chr14.nic	protein_coding	73458493,73409937,73355626,73323130,73297211,73292734,73287110,73284081,73282359,73275107	73458590,73410068,73355766,73323204,73297285,73292874,73287314,73284374,73282505,73277293	Gene ID= ENSG00000133961.19 TPM= 2.12 Transcript Type= NA
chr14	73286193	73458546	73286193	73458546	-	ENST00000554315.5@NUMB	ENST00000554315.5	protein_coding	73458493,73409937,73355626,73323130,73297211,73292734,73286193	73458546,73410068,73355766,73323204,73297285,73292874,73287314	Gene ID= ENSG00000133961.19 TPM= 2.12 Transcript Type= retained_intron
chr14	73354447	73354836	73354447	73354836	+	transcript2198.chr14.nnic@NA	transcript2198.chr14.nnic	NA	73354447	73354836	Gene ID= novel_gene_chr14_2199 TPM= 3.19 Transcript Type= NA
chr14	73409976	73463642	73409976	73463642	-	ENST00000553415.5@NUMB	ENST00000553415.5	protein_coding	73463475,73462529,73459034,73409976	73463642,73462689,73459305,73410068	Gene ID= ENSG00000133961.19 TPM= 1.06 Transcript Type= processed_transcript
chr14	73490964	73493392	73490964	73493392	+	ENST00000304061.7@RIOX1	ENST00000304061.7	protein_coding	73490964	73493392	Gene ID= ENSG00000170468.7 TPM= 15.93 Transcript Type= protein_coding
chr14	73569285	73595763	73569285	73595763	+	transcript2202.chr14.nnic@ACOT2	transcript2202.chr14.nnic	protein_coding	73569285,73573388,73574908,73593702,73595049	73569883,73573590,73575210,73593904,73595763	Gene ID= ENSG00000119673.14 TPM= 2.12 Transcript Type= NA
chr14	73569271	73575655	73569271	73575655	+	transcript2203.chr14.nnic@ACOT2	transcript2203.chr14.nnic	protein_coding	73569271,73573388,73574286,73574908	73569883,73573590,73574407,73575655	Gene ID= ENSG00000119673.14 TPM= 11.68 Transcript Type= NA
chr14	73569059	73575653	73569059	73575653	+	ENST00000238651.9@ACOT2	ENST00000238651.9	protein_coding	73569059,73573388,73574908	73569883,73573590,73575653	Gene ID= ENSG00000119673.14 TPM= 143.74 Transcript Type= protein_coding
chr14	73567620	73575653	73567620	73575653	+	ENST00000538782.2@ACOT2	ENST00000538782.2	protein_coding	73567620,73569278,73573388,73574908	73568129,73569396,73573590,73575653	Gene ID= ENSG00000119673.14 TPM= 10.44 Transcript Type= nonsense_mediated_decay
chr14	73569285	73575658	73569285	73575658	+	ENST00000613168.1@ACOT2	ENST00000613168.1	protein_coding	73569285,73573388,73574908	73569883,73573590,73575658	Gene ID= ENSG00000119673.14 TPM= 87.98 Transcript Type= protein_coding
chr14	73591706	73596496	73591706	73596496	+	ENST00000326303.4@ACOT4	ENST00000326303.4	protein_coding	73591706,73593702,73595049	73592416,73593904,73596496	Gene ID= ENSG00000177465.4 TPM= 2.12 Transcript Type= protein_coding
chr14	73711783	73714372	73711783	73714372	-	ENST00000316836.4@PNMA1	ENST00000316836.4	protein_coding	73711783	73714372	Gene ID= ENSG00000176903.4 TPM= 168.88 Transcript Type= protein_coding
chr14	73719382	73739495	73719382	73739495	-	transcript2216.chr14.nic@ELMSAN1	transcript2216.chr14.nic	protein_coding	73738560,73736998,73729640,73727458,73726830,73726604,73726033,73725272,73722698,73721297,73719382	73739495,73737297,73729985,73727524,73726972,73726707,73726108,73725360,73722847,73721509,73719501	Gene ID= ENSG00000156030.13 TPM= 4.25 Transcript Type= NA
chr14	73716711	73718144	73716711	73718144	-	transcript2219.chr14.nnic@NA	transcript2219.chr14.nnic	NA	73716711	73718144	Gene ID= novel_gene_chr14_2220 TPM= 2.12 Transcript Type= NA
chr14	73752533	73757292	73752533	73757292	+	transcript2217.chr14.nnic@NA	transcript2217.chr14.nnic	NA	73752533	73757292	Gene ID= novel_gene_chr14_2218 TPM= 8.5 Transcript Type= NA
chr14	73787209	73803270	73787209	73803270	+	transcript2222.chr14.nnic@AC005520.2	transcript2222.chr14.nnic	antisense_RNA	73787209,73789027,73802885	73787561,73789116,73803270	Gene ID= ENSG00000259065.1 TPM= 3.19 Transcript Type= NA
chr14	73787235	73804502	73787235	73804502	+	transcript2226.chr14.nnic@AC005520.2	transcript2226.chr14.nnic	antisense_RNA	73787235,73789027,73802885	73787518,73789116,73804502	Gene ID= ENSG00000259065.1 TPM= 2.12 Transcript Type= NA
chr14	73851855	73884579	73851855	73884579	+	transcript2255.chr14.nnic@PTGR2	transcript2255.chr14.nnic	protein_coding	73851855,73858816,73860539,73874023,73879096,73880055,73881205,73882399,73884101	73852004,73858899,73860657,73874214,73879305,73880176,73881292,73882438,73884579	Gene ID= ENSG00000140043.11 TPM= 2.12 Transcript Type= NA
chr14	73851844	73885456	73851844	73885456	+	ENST00000555228.5@PTGR2	ENST00000555228.5	protein_coding	73851844,73858816,73860539,73874023,73876998,73879096,73880055,73881205,73882399,73884101	73852004,73858899,73860657,73874214,73877168,73879305,73880176,73881292,73882438,73885456	Gene ID= ENSG00000140043.11 TPM= 25.49 Transcript Type= protein_coding
chr14	73851947	73885459	73851947	73885459	+	ENST00000267568.8@PTGR2	ENST00000267568.8	protein_coding	73851947,73858816,73860539,73874023,73876998,73879096,73880055,73881205,73882399,73884101	73852120,73858899,73860657,73874214,73877168,73879305,73880176,73881292,73882438,73885459	Gene ID= ENSG00000140043.11 TPM= 19.12 Transcript Type= protein_coding
chr14	73876485	73880124	73876485	73880124	-	transcript2263.chr14.nnic@NA	transcript2263.chr14.nnic	NA	73876485	73880124	Gene ID= novel_gene_chr14_2264 TPM= 3.19 Transcript Type= NA
chr14	73886871	73932511	73886871	73932511	+	ENST00000555044.5@ZNF410	ENST00000555044.5	protein_coding	73886871,73892027,73893797,73896316,73898071,73903960,73904902,73909341,73920980,73922066,73923395,73931503	73886915,73892208,73893932,73896534,73898262,73904110,73905083,73909430,73921105,73922206,73923522,73932511	Gene ID= ENSG00000119725.18 TPM= 2.12 Transcript Type= protein_coding
chr14	73932510	73950414	73932510	73950414	-	ENST00000286544.3@FAM161B	ENST00000286544.3	protein_coding	73949973,73946286,73944335,73942369,73940926,73937948,73937602,73935949,73932510	73950414,73946605,73944885,73942715,73941053,73938112,73937701,73936088,73934394	Gene ID= ENSG00000156050.8 TPM= 2.12 Transcript Type= protein_coding
chr14	73950252	73963108	73950252	73963108	+	ENST00000629426.2@COQ6	ENST00000629426.2	protein_coding	73950252,73953435,73955805,73958147,73958971,73959162,73959415,73961173,73961455,73961737,73962970	73950495,73953569,73955928,73958277,73959078,73959224,73959522,73961375,73961570,73961903,73963108	Gene ID= ENSG00000119723.16 TPM= 64.26 Transcript Type= protein_coding
chr14	74019347	74066092	74019347	74066092	+	transcript2268.chr14.nic@BBOF1	transcript2268.chr14.nic	protein_coding	74019347,74022916,74029184,74034028,74040565,74046060,74047930,74048346,74049702,74055584,74056906,74057144,74064688	74019534,74023144,74029249,74034171,74040645,74046130,74048074,74048453,74050195,74055685,74056980,74057258,74066092	Gene ID= ENSG00000119636.15 TPM= 2.66 Transcript Type= NA
chr14	74019358	74066092	74019358	74066092	+	transcript2273.chr14.nic@BBOF1	transcript2273.chr14.nic	protein_coding	74019358,74029184,74034028,74040565,74046060,74047930,74048346,74049702,74055584,74056906,74057144,74064688	74019534,74029249,74034171,74040645,74046130,74048074,74048453,74050195,74055685,74056980,74057258,74066092	Gene ID= ENSG00000119636.15 TPM= 3.72 Transcript Type= NA
chr14	74060173	74084429	74060173	74084429	-	transcript2291.chr14.nnic@ALDH6A1	transcript2291.chr14.nnic	protein_coding	74084347,74074955,74072537,74072203,74071896,74071195,74068860,74067380,74066705,74064822,74060173	74084429,74075017,74072611,74072364,74071974,74071497,74068981,74067569,74066886,74064920,74060746	Gene ID= ENSG00000119711.12 TPM= 4.25 Transcript Type= NA
chr14	74084956	74201231	74084956	74201231	+	transcript2302.chr14.nnic@LIN52	transcript2302.chr14.nnic	protein_coding	74084956,74091232,74095948,74097794,74101155,74198922,74200201	74084993,74091306,74095985,74097860,74101238,74200065,74201231	Gene ID= ENSG00000205659.10 TPM= 9.56 Transcript Type= NA
chr14	74084796	74201235	74084796	74201235	+	ENST00000555028.5@LIN52	ENST00000555028.5	protein_coding	74084796,74091232,74095948,74097794,74101155,74198922	74084993,74091306,74095985,74097860,74101238,74201235	Gene ID= ENSG00000205659.10 TPM= 5.31 Transcript Type= protein_coding
chr14	74285423	74303056	74285423	74303056	-	ENST00000356924.8@ABCD4	ENST00000356924.8	protein_coding	74302875,74300150,74299548,74297930,74296333,74295854,74295148,74293154,74292748,74292551,74292287,74290291,74290027,74289483,74288716,74288207,74287810,74286701,74285423	74303056,74300268,74299675,74298069,74296449,74295979,74295198,74293248,74292869,74292642,74292376,74290499,74290118,74289519,74288765,74288259,74287886,74286816,74286529	Gene ID= ENSG00000119688.20 TPM= 6.37 Transcript Type= protein_coding
chr14	74294054	74302988	74294054	74302988	-	transcript2319.chr14.nic@ABCD4	transcript2319.chr14.nic	protein_coding	74302875,74300150,74299548,74296333,74295854,74294054	74302988,74300268,74299675,74298069,74295979,74295198	Gene ID= ENSG00000119688.20 TPM= 2.12 Transcript Type= NA
chr14	74286014	74302937	74286014	74302937	-	ENST00000481935.5@ABCD4	ENST00000481935.5	protein_coding	74302875,74300150,74297930,74296333,74295854,74295148,74293154,74292748,74292551,74292287,74290291,74290027,74289483,74288716,74288207,74287810,74286014	74302937,74300268,74298069,74296449,74295979,74295198,74293248,74292869,74292642,74292376,74290499,74290118,74289519,74288765,74288259,74287886,74286816	Gene ID= ENSG00000119688.20 TPM= 4.25 Transcript Type= nonsense_mediated_decay
chr14	74479933	74493512	74479933	74493512	-	ENST00000555619.5@NPC2	ENST00000555619.5	protein_coding	74493193,74486329,74484415,74480702,74479933	74493512,74486436,74484587,74480779,74480288	Gene ID= ENSG00000119655.10 TPM= 122.15 Transcript Type= protein_coding
chr14	74480082	74493339	74480082	74493339	-	ENST00000553490.5@NPC2	ENST00000553490.5	protein_coding	74493193,74486329,74484415,74480686,74480082	74493339,74486436,74484587,74480779,74480288	Gene ID= ENSG00000119655.10 TPM= 2.12 Transcript Type= protein_coding
chr14	74493720	74497106	74493720	74497106	+	ENST00000556816.5@ISCA2	ENST00000556816.5	protein_coding	74493720,74494050,74494275,74494826	74493845,74494152,74494390,74497106	Gene ID= ENSG00000165898.13 TPM= 94.53 Transcript Type= protein_coding
chr14	74493756	74495366	74493756	74495366	+	ENST00000298818.12@ISCA2	ENST00000298818.12	protein_coding	74493756,74494050,74494275,74494839	74493845,74494152,74494404,74495366	Gene ID= ENSG00000165898.13 TPM= 103.03 Transcript Type= protein_coding
chr14	74496835	74499742	74496835	74499742	+	transcript2341.chr14.nnic@NA	transcript2341.chr14.nnic	NA	74496835	74499742	Gene ID= novel_gene_chr14_2342 TPM= 7.44 Transcript Type= NA
chr14	74591962	74595089	74591962	74595089	-	transcript2343.chr14.nnic@NA	transcript2343.chr14.nnic	NA	74591962	74595089	Gene ID= novel_gene_chr14_2344 TPM= 2.12 Transcript Type= NA
chr14	74604556	74608066	74604556	74608066	-	transcript2345.chr14.nnic@NA	transcript2345.chr14.nnic	NA	74604556	74608066	Gene ID= novel_gene_chr14_2346 TPM= 2.12 Transcript Type= NA
chr14	74661252	74713115	74661252	74713115	-	ENST00000356357.8@AREL1	ENST00000356357.8	protein_coding	74712933,74692041,74685600,74684454,74683296,74676583,74676141,74675699,74674034,74673077,74672831,74671408,74670762,74669947,74669649,74667465,74667319,74664836,74663899,74661252	74713115,74692328,74685660,74684680,74683533,74676752,74676321,74675946,74674111,74673218,74672952,74671483,74670871,74670126,74669774,74667594,74667377,74664925,74664074,74663822	Gene ID= ENSG00000119682.16 TPM= 15.93 Transcript Type= protein_coding
chr14	74713144	74738620	74713144	74738620	+	ENST00000341162.8@FCF1	ENST00000341162.8	protein_coding	74713144,74713485,74714872,74715951,74723272,74732731,74734076,74734882	74713200,74713552,74714943,74716099,74723344,74732818,74734170,74738620	Gene ID= ENSG00000119616.11 TPM= 3.19 Transcript Type= protein_coding
chr14	74713170	74735040	74713170	74735040	+	ENST00000534938.6@FCF1	ENST00000534938.6	protein_coding	74713170,74713485,74714872,74715951,74723272,74732731,74734076,74734882	74713259,74713552,74714943,74716099,74723344,74732818,74734170,74735040	Gene ID= ENSG00000119616.11 TPM= 1.06 Transcript Type= protein_coding
chr14	74763366	74836281	74763366	74836281	+	ENST00000325680.11@YLPM1	ENST00000325680.11	protein_coding	74763366,74778447,74780405,74781334,74797580,74802556,74809380,74809910,74810225,74811620,74812628,74816203,74816571,74816931,74817194,74818231,74821057,74824256,74829213,74835265,74835775	74764362,74778683,74780584,74782325,74799697,74802676,74809797,74810002,74810420,74811738,74812782,74816265,74816690,74817107,74817277,74818314,74821137,74824307,74829343,74835447,74836281	Gene ID= ENSG00000119596.17 TPM= 14.87 Transcript Type= protein_coding
chr14	74781385	74836190	74781385	74836190	+	ENST00000549293.5@YLPM1	ENST00000549293.5	protein_coding	74781385,74797580,74802556,74809380,74809910,74810225,74811620,74812628,74816203,74816571,74816931,74817194,74818231,74821057,74829213,74835265,74835775	74782325,74799697,74802676,74809797,74810002,74810420,74811738,74812782,74816265,74816690,74817107,74817277,74818314,74821137,74829343,74835447,74836190	Gene ID= ENSG00000119596.17 TPM= 2.12 Transcript Type= nonsense_mediated_decay
chr14	74881922	74903743	74881922	74903743	+	transcript2364.chr14.nnic@DLST	transcript2364.chr14.nnic	protein_coding	74881922,74882591,74885586,74889095,74889275,74889897,74891056,74892834,74893348,74894312,74898369,74899923,74900289,74901066,74902196,74903650	74882016,74882624,74885634,74889147,74889349,74889952,74891167,74892986,74893424,74894409,74898499,74899996,74900372,74901233,74902723,74903743	Gene ID= ENSG00000119689.14 TPM= 6.37 Transcript Type= NA
chr14	74881893	74903745	74881893	74903745	+	ENST00000334220.8@DLST	ENST00000334220.8	protein_coding	74881893,74882591,74885586,74889095,74889275,74889897,74891056,74892834,74893348,74894312,74898369,74899923,74900289,74901066,74902196	74882016,74882624,74885634,74889147,74889349,74889952,74891167,74892986,74893424,74894409,74898499,74899996,74900372,74901233,74903745	Gene ID= ENSG00000119689.14 TPM= 9.56 Transcript Type= protein_coding
chr14	74897940	74901792	74897940	74901792	-	transcript2369.chr14.nnic@NA	transcript2369.chr14.nnic	NA	74897940	74901792	Gene ID= novel_gene_chr14_2370 TPM= 4.25 Transcript Type= NA
chr14	74941834	74955784	74941834	74955784	-	ENST00000555567.5@PGF	ENST00000555567.5	protein_coding	74955168,74953904,74949357,74948507,74946379,74946213,74941834	74955784,74953946,74949553,74948583,74946408,74946275,74942733	Gene ID= ENSG00000119630.13 TPM= 11.68 Transcript Type= protein_coding
chr14	74941841	74955626	74941841	74955626	-	ENST00000553716.5@PGF	ENST00000553716.5	protein_coding	74955168,74953904,74949357,74948507,74946379,74941841	74955626,74953946,74949553,74948583,74946408,74942733	Gene ID= ENSG00000119630.13 TPM= 13.81 Transcript Type= protein_coding
chr14	74978961	74979104	74978961	74979104	-	transcript2388.chr14.nnic@NA	transcript2388.chr14.nnic	NA	74978961	74979104	Gene ID= novel_gene_chr14_2389 TPM= 2.12 Transcript Type= NA
chr14	75002911	75012366	75002911	75012366	+	ENST00000266126.9@EIF2B2	ENST00000266126.9	protein_coding	75002911,75003275,75003551,75004737,75005866,75006577,75007722,75009031	75003153,75003395,75003699,75004900,75005961,75006714,75007788,75012366	Gene ID= ENSG00000119718.10 TPM= 19.12 Transcript Type= protein_coding
chr14	75013764	75051532	75013764	75051532	-	ENST00000355774.6@MLH3	ENST00000355774.6	protein_coding	75051380,75046376,75042379,75041615,75039911,75038340,75033419,75032068,75030543,75022995,75022814,75018829,75013764	75051532,75049718,75042477,75041700,75040015,75038412,75033490,75032179,75030702,75023018,75022892,75018980,75017201	Gene ID= ENSG00000119684.15 TPM= 1.06 Transcript Type= protein_coding
chr14	75047918	75051463	75047918	75051463	-	transcript2404.chr14.nic@MLH3	transcript2404.chr14.nic	protein_coding	75051380,75047918	75051463,75049718	Gene ID= ENSG00000119684.15 TPM= 3.19 Transcript Type= NA
chr14	75053221	75064049	75053221	75064049	-	ENST00000238618.7@ACYP1	ENST00000238618.7	protein_coding	75063954,75063470,75053221	75064049,75063561,75053659	Gene ID= ENSG00000119640.8 TPM= 8.5 Transcript Type= protein_coding
chr14	75047920	75069514	75047920	75069514	-	transcript2405.chr14.nnic@ACYP1	transcript2405.chr14.nnic	protein_coding	75069210,75047920	75069514,75049718	Gene ID= ENSG00000119640.8 TPM= 2.12 Transcript Type= NA
chr14	75053232	75069514	75053232	75069514	-	transcript2407.chr14.nnic@ACYP1	transcript2407.chr14.nnic	protein_coding	75069210,75053232	75069514,75053659	Gene ID= ENSG00000119640.8 TPM= 4.25 Transcript Type= NA
chr14	75053237	75069483	75053237	75069483	-	ENST00000555463.1@ACYP1	ENST00000555463.1	protein_coding	75069210,75063470,75053237	75069483,75063561,75053659	Gene ID= ENSG00000119640.8 TPM= 4.25 Transcript Type= protein_coding
chr14	75059955	75062118	75059955	75062118	+	transcript2410.chr14.nnic@NA	transcript2410.chr14.nnic	NA	75059955	75062118	Gene ID= novel_gene_chr14_2411 TPM= 13.81 Transcript Type= NA
chr14	75069641	75078089	75069641	75078089	+	ENST00000439583.2@ZC2HC1C	ENST00000439583.2	protein_coding	75069641,75070555,75077532	75069749,75071396,75078089	Gene ID= ENSG00000119703.13 TPM= 1.06 Transcript Type= protein_coding
chr14	75069280	75079987	75069280	75079987	+	ENST00000524913.2@ZC2HC1C	ENST00000524913.2	protein_coding	75069280,75070555,75077532	75069749,75071911,75079987	Gene ID= ENSG00000119703.13 TPM= 1.06 Transcript Type= protein_coding
chr14	75067515	75068724	75067515	75068724	+	transcript2408.chr14.nnic@NA	transcript2408.chr14.nnic	NA	75067515	75068724	Gene ID= novel_gene_chr14_2409 TPM= 3.19 Transcript Type= NA
chr14	75079353	75127080	75079353	75127080	-	ENST00000238616.9@NEK9	ENST00000238616.9	protein_coding	75126703,75124046,75121119,75120510,75118830,75117195,75114203,75113339,75110321,75109685,75107343,75106502,75105950,75103842,75101657,75100992,75097100,75095372,75091270,75088480,75087018,75079353	75127080,75124223,75121174,75120580,75118935,75117326,75114313,75113403,75110371,75109877,75107487,75106702,75105996,75103997,75101765,75101153,75097270,75095431,75091478,75088641,75087230,75084686	Gene ID= ENSG00000119638.12 TPM= 11.68 Transcript Type= protein_coding
chr14	75131470	75176631	75131470	75176631	-	ENST00000303575.8@TMED10	ENST00000303575.8	protein_coding	75176355,75152032,75147664,75135760,75131470	75176631,75152143,75147737,75135886,75135006	Gene ID= ENSG00000170348.8 TPM= 173.13 Transcript Type= protein_coding
chr14	75278774	75282230	75278774	75282230	+	ENST00000303562.8@FOS	ENST00000303562.8	protein_coding	75278774,75279877,75280560,75280783	75279123,75280128,75280667,75282230	Gene ID= ENSG00000170345.9 TPM= 15.93 Transcript Type= protein_coding
chr14	75425465	75428227	75425465	75428227	-	transcript2437.chr14.nnic@NA	transcript2437.chr14.nnic	NA	75425465	75428227	Gene ID= novel_gene_chr14_2438 TPM= 4.25 Transcript Type= NA
chr14	75649791	75661189	75649791	75661189	-	ENST00000256319.6@ERG28	ENST00000256319.6	protein_coding	75660775,75657370,75654886,75651771,75649791	75661189,75657533,75654976,75651889,75651634	Gene ID= ENSG00000133935.6 TPM= 33.99 Transcript Type= protein_coding
chr14	75824729	75826232	75824729	75826232	-	transcript2447.chr14.nnic@NA	transcript2447.chr14.nnic	NA	75824729	75826232	Gene ID= novel_gene_chr14_2448 TPM= 2.12 Transcript Type= NA
chr14	75985753	76083749	75985753	76083749	+	ENST00000314067.10@IFT43	ENST00000314067.10	protein_coding	75985753,75988885,76022327,76058642,76059327,76082295,76082617,76083227,76083458	75985840,75988977,76022394,76058674,76059373,76082367,76082692,76083289,76083749	Gene ID= ENSG00000119650.12 TPM= 69.92 Transcript Type= protein_coding
chr14	75985783	76083746	75985783	76083746	+	transcript2453.chr14.nic@IFT43	transcript2453.chr14.nic	protein_coding	75985783,75988885,76022327,76058642,76059327,76082295,76082617,76083227,76083458	75986308,75988977,76022394,76058674,76059373,76082367,76082692,76083289,76083746	Gene ID= ENSG00000119650.12 TPM= 5.31 Transcript Type= NA
chr14	75985753	76083740	75985753	76083740	+	transcript2456.chr14.nic@IFT43	transcript2456.chr14.nic	protein_coding	75985753,75988885,76022327,76058642,76059327,76082295,76082617,76083227	75985840,75988977,76022394,76058674,76059373,76082367,76082692,76083740	Gene ID= ENSG00000119650.12 TPM= 4.6 Transcript Type= NA
chr14	75985753	76083746	75985753	76083746	+	transcript2457.chr14.nic@IFT43	transcript2457.chr14.nic	protein_coding	75985753,75988885,76022327,76058642,76059327,76082295,76083227,76083458	75985840,75988977,76022394,76058674,76059373,76082692,76083289,76083746	Gene ID= ENSG00000119650.12 TPM= 8.32 Transcript Type= NA
chr14	75985784	76059271	75985784	76059271	+	ENST00000556742.1@IFT43	ENST00000556742.1	protein_coding	75985784,75988885,76022327,76058642	75985840,75988977,76022394,76059271	Gene ID= ENSG00000119650.12 TPM= 3.19 Transcript Type= protein_coding
chr14	76151922	76174035	76151922	76174035	+	ENST00000557263.5@GPATCH2L	ENST00000557263.5	protein_coding	76151922,76154354,76166663,76171843,76173546	76151975,76155025,76166727,76172019,76174035	Gene ID= ENSG00000089916.17 TPM= 1.06 Transcript Type= protein_coding
chr14	76196931	76199535	76196931	76199535	+	transcript2486.chr14.nnic@NA	transcript2486.chr14.nnic	NA	76196931	76199535	Gene ID= novel_gene_chr14_2487 TPM= 2.12 Transcript Type= NA
chr14	76205040	76207538	76205040	76207538	+	transcript2484.chr14.nnic@NA	transcript2484.chr14.nnic	NA	76205040	76207538	Gene ID= novel_gene_chr14_2485 TPM= 5.31 Transcript Type= NA
chr14	76208522	76212395	76208522	76212395	+	transcript2491.chr14.nnic@NA	transcript2491.chr14.nnic	NA	76208522	76212395	Gene ID= novel_gene_chr14_2492 TPM= 3.19 Transcript Type= NA
chr14	76499646	76501835	76499646	76501835	+	ENST00000611036.1@ESRRB	ENST00000611036.1	protein_coding	76499646	76501835	Gene ID= ENSG00000119715.14 TPM= 6.37 Transcript Type= retained_intron
chr14	76761465	76764019	76761465	76764019	+	transcript2508.chr14.nnic@NA	transcript2508.chr14.nnic	NA	76761465	76764019	Gene ID= novel_gene_chr14_2509 TPM= 7.44 Transcript Type= NA
chr14	76773855	76775686	76773855	76775686	-	transcript2510.chr14.nnic@NA	transcript2510.chr14.nnic	NA	76773855	76775686	Gene ID= novel_gene_chr14_2511 TPM= 2.12 Transcript Type= NA
chr14	76786178	76812940	76786178	76812940	-	ENST00000251089.6@ANGEL1	ENST00000251089.6	protein_coding	76812764,76809059,76807922,76807433,76806416,76803786,76803371,76791297,76790611,76786178	76812940,76809643,76808148,76807502,76806849,76803912,76803481,76791366,76790774,76789388	Gene ID= ENSG00000013523.9 TPM= 5.31 Transcript Type= protein_coding
chr14	77024543	77028699	77024543	77028699	-	ENST00000238647.4@IRF2BPL	ENST00000238647.4	protein_coding	77024543	77028699	Gene ID= ENSG00000119669.4 TPM= 75.41 Transcript Type= protein_coding
chr14	77027363	77029032	77027363	77029032	+	transcript2513.chr14.nnic@AC007686.3	transcript2513.chr14.nnic	antisense_RNA	77027363,77028389	77027811,77029032	Gene ID= ENSG00000273729.1 TPM= 5.31 Transcript Type= NA
chr14	77028086	77031572	77028086	77031572	+	ENST00000619017.1@AC007686.3	ENST00000619017.1	antisense_RNA	77028086	77031572	Gene ID= ENSG00000273729.1 TPM= 3.19 Transcript Type= antisense_RNA
chr14	77098097	77117287	77098097	77117287	+	ENST00000361786.6@CIPC	ENST00000361786.6	protein_coding	77098097,77105657,77109812,77113425	77098361,77105844,77109981,77117287	Gene ID= ENSG00000198894.7 TPM= 42.49 Transcript Type= protein_coding
chr14	77320884	77331597	77320884	77331597	+	ENST00000216465.9@GSTZ1	ENST00000216465.9	protein_coding	77320884,77324870,77326838,77327472,77327912,77329123,77329755,77330310,77331069	77321183,77324921,77326905,77327552,77328037,77329201,77329807,77330359,77331597	Gene ID= ENSG00000100577.18 TPM= 6.37 Transcript Type= protein_coding
chr14	77335021	77377109	77335021	77377109	-	ENST00000216468.7@TMED8	ENST00000216468.7	protein_coding	77376936,77351673,77346349,77343697,77343178,77335021	77377109,77351751,77346478,77343823,77343483,77341988	Gene ID= ENSG00000100580.7 TPM= 21.24 Transcript Type= protein_coding
chr14	77426682	77457640	77426682	77457640	-	ENST00000557658.5@VIPAS39	ENST00000557658.5	protein_coding	77457495,77454010,77453299,77451187,77449714,77449293,77448494,77444249,77443119,77442560,77441066,77437808,77435844,77435259,77434262,77433842,77429681,77429006,77428370,77426682	77457640,77454102,77453401,77451333,77449752,77449357,77448550,77444341,77443152,77442662,77441093,77437881,77435919,77435393,77434303,77433931,77429767,77429095,77428474,77427636	Gene ID= ENSG00000151445.15 TPM= 13.81 Transcript Type= protein_coding
chr14	77426675	77457561	77426675	77457561	-	ENST00000343765.6@VIPAS39	ENST00000343765.6	protein_coding	77457495,77457095,77454010,77453299,77451187,77449714,77449293,77448494,77444249,77443119,77442560,77441066,77437808,77435844,77435259,77434262,77433842,77429681,77429006,77428370,77426675	77457561,77457365,77454102,77453401,77451333,77449752,77449357,77448550,77444341,77443152,77442662,77441093,77437881,77435919,77435393,77434303,77433931,77429767,77429095,77428474,77427636	Gene ID= ENSG00000151445.15 TPM= 8.5 Transcript Type= protein_coding
chr14	77458030	77469474	77458030	77469474	+	ENST00000216479.7@AHSA1	ENST00000216479.7	protein_coding	77458030,77459616,77462160,77462642,77464598,77465539,77468083,77468457,77469077	77458269,77459806,77462242,77462759,77464686,77465667,77468184,77468508,77469474	Gene ID= ENSG00000100591.7 TPM= 117.9 Transcript Type= protein_coding
chr14	77507898	77511169	77507898	77511169	-	transcript2536.chr14.nnic@NA	transcript2536.chr14.nnic	NA	77507898	77511169	Gene ID= novel_gene_chr14_2537 TPM= 2.12 Transcript Type= NA
chr14	77672404	77708020	77672404	77708020	-	ENST00000216489.7@ALKBH1	ENST00000216489.7	protein_coding	77707822,77704369,77694738,77679880,77675656,77672404	77708020,77704477,77694900,77679970,77675849,77674241	Gene ID= ENSG00000100601.9 TPM= 11.68 Transcript Type= protein_coding
chr14	77708071	77717598	77708071	77717598	+	ENST00000557342.5@SLIRP	ENST00000557342.5	protein_coding	77708071,77710838,77715772,77717496	77708208,77710896,77715879,77717598	Gene ID= ENSG00000119705.9 TPM= 156.14 Transcript Type= protein_coding
chr14	77708079	77717598	77708079	77717598	+	ENST00000238688.9@SLIRP	ENST00000238688.9	protein_coding	77708079,77710838,77715772,77717502	77708208,77710896,77715879,77717598	Gene ID= ENSG00000119705.9 TPM= 6.37 Transcript Type= protein_coding
chr14	77717599	77761190	77717599	77761190	-	ENST00000261531.11@SNW1	ENST00000261531.11	protein_coding	77761114,77754967,77751319,77738966,77738778,77736971,77735937,77734947,77732485,77730988,77723181,77720711,77718367,77717599	77761190,77755120,77751480,77739061,77738884,77737075,77736006,77735012,77732601,77731129,77723277,77720828,77718530,77718286	Gene ID= ENSG00000100603.13 TPM= 55.23 Transcript Type= protein_coding
chr14	77724629	77726824	77724629	77726824	+	transcript2551.chr14.nnic@NA	transcript2551.chr14.nnic	NA	77724629	77726824	Gene ID= novel_gene_chr14_2552 TPM= 3.19 Transcript Type= NA
chr14	78432302	78436283	78432302	78436283	-	transcript2560.chr14.nnic@NA	transcript2560.chr14.nnic	NA	78432302	78436283	Gene ID= novel_gene_chr14_2561 TPM= 2.12 Transcript Type= NA
chr14	80212015	80212182	80212015	80212182	-	transcript2567.chr14.nnic@NA	transcript2567.chr14.nnic	NA	80212015	80212182	Gene ID= novel_gene_chr14_2568 TPM= 4.25 Transcript Type= NA
chr14	81176141	81179097	81176141	81179097	-	transcript2570.chr14.nnic@NA	transcript2570.chr14.nnic	NA	81176141	81179097	Gene ID= novel_gene_chr14_2571 TPM= 2.12 Transcript Type= NA
chr14	81221005	81223385	81221005	81223385	+	transcript2575.chr14.nnic@NA	transcript2575.chr14.nnic	NA	81221005	81223385	Gene ID= novel_gene_chr14_2576 TPM= 2.12 Transcript Type= NA
chr14	87933014	87993271	87933014	87993271	-	ENST00000261304.6@GALC	ENST00000261304.6	protein_coding	87992970,87988455,87988144,87986489,87984394,87982205,87976358,87968335,87965505,87963384,87950659,87949845,87947728,87945553,87941395,87939905,87933014	87993271,87988523,87988207,87986602,87984533,87982243,87976488,87968490,87965629,87963511,87950748,87949931,87947878,87945733,87941558,87939981,87934878	Gene ID= ENSG00000054983.16 TPM= 8.5 Transcript Type= protein_coding
chr14	87974325	87978838	87974325	87978838	+	transcript2592.chr14.nnic@NA	transcript2592.chr14.nnic	NA	87974325	87978838	Gene ID= novel_gene_chr14_2593 TPM= 2.12 Transcript Type= NA
chr14	88384924	88438460	88384924	88438460	+	ENST00000556553.5@SPATA7	ENST00000556553.5	protein_coding	88384924,88385398,88391381,88396156,88416711,88426232,88427630,88429348,88431172,88433135,88437543,88437838	88385061,88385837,88391455,88396203,88416844,88426704,88427696,88429463,88431225,88433212,88437597,88438460	Gene ID= ENSG00000042317.16 TPM= 3.19 Transcript Type= protein_coding
chr14	88385691	88438453	88385691	88438453	+	ENST00000553626.5@SPATA7	ENST00000553626.5	protein_coding	88385691,88391381,88393393,88396156,88416711,88426232,88427630,88431172,88433135,88437543,88437838	88385837,88391455,88393488,88396203,88416844,88426704,88429463,88431225,88433212,88437597,88438453	Gene ID= ENSG00000042317.16 TPM= 1.06 Transcript Type= retained_intron
chr14	88471941	88474153	88471941	88474153	+	transcript2600.chr14.nnic@NA	transcript2600.chr14.nnic	NA	88471941	88474153	Gene ID= novel_gene_chr14_2601 TPM= 3.19 Transcript Type= NA
chr14	88562909	88627596	88562909	88627596	+	ENST00000251038.9@ZC3H14	ENST00000251038.9	protein_coding	88562909,88563651,88568039,88571084,88572030,88572578,88574693,88575840,88577985,88596734,88601924,88602828,88607243,88609267,88609712,88610834,88611745	88563169,88563693,88568153,88571124,88572225,88573007,88574853,88575940,88578140,88596808,88602083,88603060,88607363,88609403,88609803,88610940,88627596	Gene ID= ENSG00000100722.18 TPM= 1.06 Transcript Type= protein_coding
chr14	88562993	88612979	88562993	88612979	+	transcript2611.chr14.nic@ZC3H14	transcript2611.chr14.nic	protein_coding	88562993,88563651,88568039,88571084,88572030,88572578,88574693,88575840,88577985,88601924,88602828,88607243,88609267,88609715,88610834,88611745	88563169,88563693,88568153,88571124,88572225,88573007,88574853,88575940,88578140,88602083,88603060,88607363,88609403,88609803,88610940,88612979	Gene ID= ENSG00000100722.18 TPM= 2.12 Transcript Type= NA
chr14	88562970	88612407	88562970	88612407	+	ENST00000302216.12@ZC3H14	ENST00000302216.12	protein_coding	88562970,88563651,88568039,88571084,88572030,88572578,88574693,88575840,88577985,88607243,88609267,88609715,88610834,88611745	88563169,88563693,88568153,88571124,88572225,88573007,88574853,88575940,88578140,88607363,88609403,88609803,88610940,88612407	Gene ID= ENSG00000100722.18 TPM= 4.25 Transcript Type= protein_coding
chr14	88562993	88612892	88562993	88612892	+	transcript2622.chr14.nic@ZC3H14	transcript2622.chr14.nic	protein_coding	88562993,88563651,88568039,88571084,88572030,88572578,88574693,88575840,88577985,88607243,88609267,88609712,88610834,88611745	88563169,88563693,88568153,88571124,88572225,88573007,88574853,88575940,88578140,88607363,88609403,88609803,88610940,88612892	Gene ID= ENSG00000100722.18 TPM= 2.12 Transcript Type= NA
chr14	88562993	88586853	88562993	88586853	+	transcript2631.chr14.nic@ZC3H14	transcript2631.chr14.nic	protein_coding	88562993,88563651,88568039,88571084,88572030,88572578,88574693,88575840,88577985,88586571	88563169,88563693,88568153,88571124,88572225,88573007,88574853,88575940,88578140,88586853	Gene ID= ENSG00000100722.18 TPM= 6.37 Transcript Type= NA
chr14	88563010	88611884	88563010	88611884	+	ENST00000556945.5@ZC3H14	ENST00000556945.5	protein_coding	88563010,88563651,88568039,88571084,88572030,88572578,88574693,88575840,88577985,88596734,88607243,88609267,88609712,88610834,88611745	88563169,88563693,88568153,88571124,88572225,88573007,88574853,88575940,88578140,88596808,88607363,88609403,88609803,88610940,88611884	Gene ID= ENSG00000100722.18 TPM= 3.19 Transcript Type= protein_coding
chr14	88589231	88592408	88589231	88592408	+	ENST00000617439.1@AL162171.3	ENST00000617439.1	sense_intronic	88589231	88592408	Gene ID= ENSG00000278576.1 TPM= 1.06 Transcript Type= sense_intronic
chr14	88824153	88877995	88824153	88877995	+	ENST00000345383.9@TTC8	ENST00000345383.9	protein_coding	88824153,88824574,88833693,88839452,88840865,88841037,88841425,88843806,88852971,88857190,88861222,88870059,88871549,88872330,88875026,88877294	88824214,88824821,88833722,88839572,88840928,88841196,88841514,88843850,88853056,88857277,88861332,88870198,88871723,88872452,88875109,88877995	Gene ID= ENSG00000165533.18 TPM= 13.81 Transcript Type= protein_coding
chr14	88824664	88877956	88824664	88877956	+	transcript2636.chr14.nic@TTC8	transcript2636.chr14.nic	protein_coding	88824664,88839452,88840865,88841037,88841425,88843806,88852971,88857190,88861222,88870059,88871549,88872330,88877294	88824821,88839572,88840928,88841196,88841514,88843850,88853056,88857277,88861332,88870198,88871723,88872452,88877956	Gene ID= ENSG00000165533.18 TPM= 2.12 Transcript Type= NA
chr14	88824624	88881078	88824624	88881078	+	ENST00000622513.4@TTC8	ENST00000622513.4	protein_coding	88824624,88839452,88840865,88841037,88841425,88843806,88852971,88857190,88861222,88870059,88871549,88872330,88875026,88877294	88824821,88839572,88840928,88841196,88841514,88843850,88853056,88857277,88861332,88870198,88871723,88872452,88875109,88881078	Gene ID= ENSG00000165533.18 TPM= 1.06 Transcript Type= protein_coding
chr14	89161385	89619202	89161385	89619202	-	transcript2643.chr14.nic@FOXN3	transcript2643.chr14.nic	protein_coding	89619028,89486569,89411934,89350672,89280950,89190384,89180701,89161385	89619202,89486671,89412490,89350808,89281014,89190449,89180806,89162969	Gene ID= ENSG00000053254.15 TPM= 2.12 Transcript Type= NA
chr14	89161134	89417223	89161134	89417223	-	transcript2645.chr14.nic@FOXN3	transcript2645.chr14.nic	protein_coding	89416871,89411934,89350672,89280950,89190384,89180701,89161134	89417223,89412490,89350808,89281014,89190449,89180806,89162969	Gene ID= ENSG00000053254.15 TPM= 8.15 Transcript Type= NA
chr14	89161385	89417112	89161385	89417112	-	ENST00000557258.5@FOXN3	ENST00000557258.5	protein_coding	89416871,89411934,89350672,89280950,89180701,89161385	89417112,89412490,89350808,89281014,89180806,89162969	Gene ID= ENSG00000053254.15 TPM= 18.06 Transcript Type= protein_coding
chr14	89156637	89160214	89156637	89160214	-	transcript2663.chr14.nnic@NA	transcript2663.chr14.nnic	NA	89156637	89160214	Gene ID= novel_gene_chr14_2664 TPM= 5.31 Transcript Type= NA
chr14	89417354	89419793	89417354	89419793	+	ENST00000555562.1@FOXN3-AS1	ENST00000555562.1	antisense_RNA	89417354,89419160	89417796,89419793	Gene ID= ENSG00000258920.1 TPM= 1.06 Transcript Type= antisense_RNA
chr14	89594558	89595173	89594558	89595173	+	transcript2661.chr14.nnic@NA	transcript2661.chr14.nnic	NA	89594558	89595173	Gene ID= novel_gene_chr14_2662 TPM= 2.12 Transcript Type= NA
chr14	89955951	90044768	89955951	90044768	+	ENST00000335725.8@TDP1	ENST00000335725.8	protein_coding	89955951,89956578,89963108,89966147,89967367,89971175,89975781,89980540,89984516,89985132,89988905,89989717,89991917,89993376,90019316,90033106,90043070	89955970,89956800,89963673,89966190,89967422,89971271,89975815,89980632,89984683,89985210,89989090,89989765,89991983,89993483,90019418,90033214,90044768	Gene ID= ENSG00000042088.13 TPM= 2.12 Transcript Type= protein_coding
chr14	89956572	90043315	89956572	90043315	+	ENST00000555178.5@TDP1	ENST00000555178.5	protein_coding	89956572,89963108,89966147,89967367,89971175,89980540,89984516,89985132,89988905,89989717,89991917,89993376,90019316,90033106,90043070	89956800,89963673,89966190,89967422,89971271,89980632,89984683,89985210,89989090,89989765,89991983,89993483,90019418,90033214,90043315	Gene ID= ENSG00000042088.13 TPM= 1.06 Transcript Type= nonsense_mediated_decay
chr14	90256495	90275429	90256495	90275429	+	ENST00000261303.12@PSMC1	ENST00000261303.12	protein_coding	90256495,90259160,90260115,90263318,90263662,90264041,90265070,90268224,90269397,90270198,90272273	90256600,90259213,90260211,90263442,90263847,90264169,90265166,90268413,90269548,90270352,90275429	Gene ID= ENSG00000100764.13 TPM= 99.84 Transcript Type= protein_coding
chr14	90267856	90332137	90267856	90332137	-	ENST00000354366.7@NRDE2	ENST00000354366.7	protein_coding	90331841,90318005,90316578,90312394,90303935,90302720,90301239,90298260,90292697,90290221,90288217,90286354,90279062,90267856	90332137,90318113,90316811,90312543,90304382,90303125,90301372,90298380,90292872,90290607,90289145,90286492,90279133,90278461	Gene ID= ENSG00000119720.17 TPM= 4.25 Transcript Type= protein_coding
chr14	90397029	90405072	90397029	90405072	+	ENST00000447653.7@CALM1	ENST00000447653.7	protein_coding	90397029,90398991,90400065,90401259,90403862,90404379,90404689	90397233,90399087,90400095,90401402,90403968,90404514,90405072	Gene ID= ENSG00000198668.10 TPM= 1.06 Transcript Type= protein_coding
chr14	90396983	90408261	90396983	90408261	+	ENST00000356978.8@CALM1	ENST00000356978.8	protein_coding	90396983,90400065,90401259,90403862,90404379,90404689	90397233,90400095,90401402,90403968,90404514,90408261	Gene ID= ENSG00000198668.10 TPM= 659.6 Transcript Type= protein_coding
chr14	90397932	90404807	90397932	90404807	+	ENST00000553964.5@CALM1	ENST00000553964.5	protein_coding	90397932,90401259,90403862,90404379,90404689	90400095,90401402,90403968,90404514,90404807	Gene ID= ENSG00000198668.10 TPM= 2.12 Transcript Type= retained_intron
chr14	90540588	90816515	90540588	90816515	-	transcript2696.chr14.nic@TTC7B	transcript2696.chr14.nic	protein_coding	90816175,90786174,90780738,90744792,90730075,90695500,90689540,90680472,90676523,90658304,90657174,90654993,90652841,90646951,90644048,90617929,90610742,90605597,90603253,90593486,90578106,90540588	90816515,90786328,90780906,90744922,90730196,90695578,90689712,90680535,90676660,90658387,90657278,90655110,90652898,90647023,90644208,90618045,90610839,90605758,90603303,90593626,90578308,90541589	Gene ID= ENSG00000165914.14 TPM= 26.55 Transcript Type= NA
chr14	90772491	90816441	90772491	90816441	-	transcript2701.chr14.nic@TTC7B	transcript2701.chr14.nic	protein_coding	90816175,90786174,90780738,90772491	90816441,90786328,90780906,90772942	Gene ID= ENSG00000165914.14 TPM= 4.25 Transcript Type= NA
chr14	90813674	90815634	90813674	90815634	-	transcript2702.chr14.nnic@NA	transcript2702.chr14.nnic	NA	90813674	90815634	Gene ID= novel_gene_chr14_2703 TPM= 2.12 Transcript Type= NA
chr14	91114063	91225355	91114063	91225355	+	transcript2713.chr14.nic@C14orf159	transcript2713.chr14.nic	protein_coding	91114063,91145221,91147781,91157639,91160266,91167225,91170003,91173289,91175934,91181186,91188910,91196375,91199757,91204706,91215405,91224684	91114283,91145313,91147858,91157690,91160397,91167378,91170186,91173439,91176056,91181389,91189170,91196474,91199905,91204825,91215556,91225355	Gene ID= ENSG00000133943.20 TPM= 19.58 Transcript Type= NA
chr14	91114063	91225355	91114063	91225355	+	transcript2726.chr14.nic@C14orf159	transcript2726.chr14.nic	protein_coding	91114063,91145221,91157639,91160266,91167225,91170003,91173289,91175934,91181186,91188910,91196375,91199757,91204706,91215405,91224684	91114283,91145313,91157690,91160397,91167378,91170186,91173439,91176056,91181389,91189170,91196474,91199905,91204825,91215556,91225355	Gene ID= ENSG00000133943.20 TPM= 6.83 Transcript Type= NA
chr14	91114026	91225355	91114026	91225355	+	transcript2740.chr14.nic@C14orf159	transcript2740.chr14.nic	protein_coding	91114026,91157639,91160266,91167225,91170003,91173289,91175934,91181186,91188910,91196375,91199757,91204706,91215405,91224684	91114283,91157690,91160397,91167378,91170186,91173403,91176056,91181389,91189170,91196474,91199905,91204825,91215556,91225355	Gene ID= ENSG00000133943.20 TPM= 16.06 Transcript Type= NA
chr14	91114026	91225355	91114026	91225355	+	transcript2741.chr14.nic@C14orf159	transcript2741.chr14.nic	protein_coding	91114026,91157639,91160266,91167225,91170003,91173289,91175934,91181186,91188910,91196375,91199757,91204706,91215405,91224684	91114283,91157690,91160397,91167378,91170186,91173439,91176056,91181389,91189170,91196474,91199905,91204825,91215556,91225355	Gene ID= ENSG00000133943.20 TPM= 56.75 Transcript Type= NA
chr14	91114366	91225355	91114366	91225355	+	transcript2750.chr14.nic@C14orf159	transcript2750.chr14.nic	protein_coding	91114366,91157639,91160266,91167225,91170003,91173289,91175934,91181186,91188910,91196375,91199757,91204706,91215405,91224684	91114528,91157690,91160397,91167378,91170201,91173439,91176056,91181389,91189170,91196474,91199905,91204825,91215556,91225355	Gene ID= ENSG00000133943.20 TPM= 6.7 Transcript Type= NA
chr14	91114063	91225632	91114063	91225632	+	ENST00000256324.14@C14orf159	ENST00000256324.14	protein_coding	91114063,91157639,91160266,91167225,91170003,91173289,91175934,91181186,91188910,91196375,91199757,91204706,91215405,91224684	91114283,91157690,91160397,91167378,91170201,91173439,91176056,91181389,91189170,91196474,91199905,91204825,91215556,91225632	Gene ID= ENSG00000133943.20 TPM= 3.19 Transcript Type= protein_coding
chr14	91114087	91167721	91114087	91167721	+	ENST00000518665.6@C14orf159	ENST00000518665.6	protein_coding	91114087,91145221,91147781,91157639,91160266,91167225,91167469	91114283,91145313,91147858,91157690,91160397,91167378,91167721	Gene ID= ENSG00000133943.20 TPM= 1.06 Transcript Type= protein_coding
chr14	91114390	91225355	91114390	91225355	+	ENST00000523816.5@C14orf159	ENST00000523816.5	protein_coding	91114390,91145221,91147781,91157639,91160266,91167225,91170003,91173289,91175934,91181186,91188910,91196375,91199757,91204706,91215405,91224684	91114528,91145313,91147858,91157690,91160397,91167378,91170186,91173439,91176056,91181389,91189170,91196474,91199905,91204825,91215556,91225355	Gene ID= ENSG00000133943.20 TPM= 1.52 Transcript Type= protein_coding
chr14	91114442	91225352	91114442	91225352	+	ENST00000428926.6@C14orf159	ENST00000428926.6	protein_coding	91114442,91157639,91160266,91167225,91170003,91173289,91175934,91181186,91188910,91196375,91199757,91204706,91215405,91224684	91114528,91157690,91160397,91167378,91170186,91173439,91176056,91181389,91189170,91196474,91199905,91204825,91215556,91225352	Gene ID= ENSG00000133943.20 TPM= 6.83 Transcript Type= protein_coding
chr14	91222013	91225352	91222013	91225352	+	transcript2767.chr14.nnic@NA	transcript2767.chr14.nnic	NA	91222013	91225352	Gene ID= novel_gene_chr14_2768 TPM= 3.19 Transcript Type= NA
chr14	91462054	91510480	91462054	91510480	-	ENST00000554390.5@PPP4R3A	ENST00000554390.5	protein_coding	91509506,91490747,91485632,91481576,91476909,91476408,91475850,91473239,91473033,91470837,91465250,91462735,91462054	91510480,91490802,91485730,91482193,91476986,91476524,91475966,91473370,91473135,91470995,91465419,91462877,91462239	Gene ID= ENSG00000100796.17 TPM= 6.37 Transcript Type= non_stop_decay
chr14	92003587	92040072	92003587	92040072	-	transcript2798.chr14.nic@TRIP11	transcript2798.chr14.nic	protein_coding	92039547,92033192,92025310,92021556,92017682,92015696,92014215,92011755,92010986,92007640,92003587	92040072,92033253,92025420,92021831,92017750,92015861,92014577,92011795,92011072,92007852,92006448	Gene ID= ENSG00000100815.12 TPM= 8.5 Transcript Type= NA
chr14	92058552	92106621	92058552	92106621	-	ENST00000545170.5@ATXN3	ENST00000545170.5	protein_coding	92106529,92096674,92096093,92093746,92093252,92088730,92083126,92082300,92080965,92080541,92070935,92058552	92106621,92096838,92096137,92093831,92093318,92088817,92083258,92082466,92081061,92080567,92071053,92064414	Gene ID= ENSG00000066427.21 TPM= 6.9 Transcript Type= protein_coding
chr14	92058552	92106621	92058552	92106621	-	ENST00000393287.9@ATXN3	ENST00000393287.9	protein_coding	92106529,92096674,92096093,92088730,92083126,92082300,92080965,92070935,92058552	92106621,92096838,92096137,92088817,92083258,92082466,92081061,92071053,92064414	Gene ID= ENSG00000066427.21 TPM= 1.59 Transcript Type= protein_coding
chr14	92116122	92121724	92116122	92121724	-	ENST00000553514.5@NDUFB1	ENST00000553514.5	protein_coding	92121642,92118849,92117498,92116122	92121724,92118966,92117642,92116229	Gene ID= ENSG00000183648.9 TPM= 25.84 Transcript Type= protein_coding
chr14	92116126	92118726	92116126	92118726	-	ENST00000553666.1@NDUFB1	ENST00000553666.1	protein_coding	92117498,92116126	92118726,92116229	Gene ID= ENSG00000183648.9 TPM= 31.86 Transcript Type= retained_intron
chr14	92121937	92172145	92121937	92172145	+	ENST00000298875.8@CPSF2	ENST00000298875.8	protein_coding	92121937,92126122,92130951,92134011,92134250,92135367,92138232,92142164,92143004,92154358,92155123,92156479,92157659,92158983,92161112,92161652	92122128,92126180,92131133,92134170,92134355,92135496,92138347,92142351,92143294,92154458,92155323,92156631,92157884,92159282,92161246,92172145	Gene ID= ENSG00000165934.12 TPM= 1.06 Transcript Type= protein_coding
chr14	92513774	92688994	92513774	92688994	+	ENST00000216487.11@RIN3	ENST00000216487.11	protein_coding	92513774,92555751,92577360,92615407,92641238,92651582,92659161,92676475,92684987,92687926	92513976,92555955,92577477,92615479,92641329,92653075,92659469,92676606,92685150,92688994	Gene ID= ENSG00000100599.15 TPM= 25.49 Transcript Type= protein_coding
chr14	92703809	92748626	92703809	92748626	-	transcript2840.chr14.nnic@LGMN	transcript2840.chr14.nnic	protein_coding	92748489,92732649,92718747,92717380,92716136,92714376,92713823,92712805,92711837,92711659,92709672,92706483,92703809	92748626,92732815,92718844,92717461,92716221,92714451,92713885,92712871,92711955,92711748,92709872,92706653,92704361	Gene ID= ENSG00000100600.14 TPM= 5.31 Transcript Type= NA
chr14	92703809	92748702	92703809	92748702	-	ENST00000334869.8@LGMN	ENST00000334869.8	protein_coding	92748489,92732649,92718747,92717380,92716136,92714376,92713823,92712805,92711837,92711659,92709672,92706483,92704640,92703809	92748702,92732815,92718844,92717461,92716221,92714451,92713885,92712871,92711955,92711748,92709872,92706653,92704707,92704361	Gene ID= ENSG00000100600.14 TPM= 59.48 Transcript Type= protein_coding
chr14	92703807	92748612	92703807	92748612	-	ENST00000555699.5@LGMN	ENST00000555699.5	protein_coding	92748489,92732649,92718747,92717380,92716136,92714376,92713823,92712805,92711837,92711659,92709672,92703807	92748612,92732815,92718844,92717461,92716221,92714451,92713885,92712871,92711955,92711748,92709872,92704361	Gene ID= ENSG00000100600.14 TPM= 7.44 Transcript Type= protein_coding
chr14	92794231	92839963	92794231	92839963	+	ENST00000163416.6@GOLGA5	ENST00000163416.6	protein_coding	92794231,92797408,92806736,92809300,92810254,92811551,92816251,92819708,92824546,92833122,92835559,92837386,92839366	92794456,92797981,92806963,92809519,92810377,92811754,92816421,92819836,92824644,92833347,92835664,92837449,92839963	Gene ID= ENSG00000066455.12 TPM= 47.8 Transcript Type= protein_coding
chr14	92799445	92805171	92799445	92805171	-	transcript2848.chr14.nnic@NA	transcript2848.chr14.nnic	NA	92799445	92805171	Gene ID= novel_gene_chr14_2849 TPM= 5.31 Transcript Type= NA
chr14	92939862	93115916	92939862	93115916	-	transcript2850.chr14.nnic@ITPK1	transcript2850.chr14.nnic	protein_coding	93115889,93115772,93115069,93076595,93016676,92993880,92962751,92962355,92958201,92951946,92946331,92939862	93115916,93115837,93115305,93076619,93016801,92993997,92962849,92962395,92958366,92952013,92946493,92941904	Gene ID= ENSG00000100605.16 TPM= 17.03 Transcript Type= NA
chr14	92939865	93115936	92939865	93115936	-	transcript2851.chr14.nnic@ITPK1	transcript2851.chr14.nnic	protein_coding	93115772,93115069,93076595,93016676,92993880,92962751,92962355,92958201,92951946,92946331,92940228,92939865	93115936,93115305,93076619,93016801,92993997,92962849,92962395,92958366,92952013,92946493,92941904,92940042	Gene ID= ENSG00000100605.16 TPM= 5.34 Transcript Type= NA
chr14	92939862	93115925	92939862	93115925	-	transcript2858.chr14.nic@ITPK1	transcript2858.chr14.nic	protein_coding	93115069,93076595,93016676,92993880,92962751,92962355,92958201,92951946,92946331,92939862	93115925,93076619,93016801,92993997,92962849,92962395,92958366,92952013,92946493,92941904	Gene ID= ENSG00000100605.16 TPM= 8 Transcript Type= NA
chr14	92939862	93115936	92939862	93115936	-	transcript2859.chr14.nic@ITPK1	transcript2859.chr14.nic	protein_coding	93115772,93115069,93016676,92993880,92962751,92962355,92958201,92951946,92946331,92939862	93115936,93115305,93016801,92993997,92962849,92962395,92958366,92952013,92946493,92941904	Gene ID= ENSG00000100605.16 TPM= 5.52 Transcript Type= NA
chr14	92939862	93115279	92939862	93115279	-	ENST00000555495.5@ITPK1	ENST00000555495.5	protein_coding	93115069,93016676,92993880,92962751,92962355,92958201,92951946,92946331,92939862	93115279,93016801,92993997,92962849,92962395,92958366,92952013,92946493,92941904	Gene ID= ENSG00000100605.16 TPM= 15.08 Transcript Type= protein_coding
chr14	93067452	93072152	93067452	93072152	+	ENST00000553639.1@ITPK1-AS1	ENST00000553639.1	antisense_RNA	93067452	93072152	Gene ID= ENSG00000258730.1 TPM= 6.37 Transcript Type= antisense_RNA
chr14	93182199	93184923	93182199	93184923	-	ENST00000556883.1@MOAP1	ENST00000556883.1	protein_coding	93184559,93182199	93184923,93184362	Gene ID= ENSG00000165943.4 TPM= 15.4 Transcript Type= protein_coding
chr14	93182196	93184928	93182196	93184928	-	ENST00000298894.4@MOAP1	ENST00000298894.4	protein_coding	93184810,93184559,93182196	93184928,93184713,93184362	Gene ID= ENSG00000165943.4 TPM= 100.37 Transcript Type= protein_coding
chr14	93184951	93187086	93184951	93187086	+	ENST00000283534.4@TMEM251	ENST00000283534.4	protein_coding	93184951,93186260	93185032,93187086	Gene ID= ENSG00000153485.5 TPM= 9.56 Transcript Type= protein_coding
chr14	93185013	93187089	93185013	93187089	+	ENST00000415050.2@TMEM251	ENST00000415050.2	protein_coding	93185013,93186260	93185485,93187089	Gene ID= ENSG00000153485.5 TPM= 8.5 Transcript Type= protein_coding
chr14	93202894	93207094	93202894	93207094	-	ENST00000306954.4@GON7	ENST00000306954.4	protein_coding	93206830,93202894	93207094,93203782	Gene ID= ENSG00000170270.4 TPM= 35.05 Transcript Type= protein_coding
chr14	93207056	93229215	93207056	93229215	+	ENST00000013070.10@UBR7	ENST00000013070.10	protein_coding	93207056,93209824,93210648,93212032,93214929,93215176,93218527,93219212,93220249,93222313,93226943	93207441,93209957,93210708,93212127,93214982,93215281,93218735,93219361,93220411,93222374,93229215	Gene ID= ENSG00000012963.14 TPM= 29.74 Transcript Type= protein_coding
chr14	93207243	93227118	93207243	93227118	+	ENST00000553674.1@UBR7	ENST00000553674.1	protein_coding	93207243,93210648,93212032,93214929,93215176,93218527,93219212,93220249,93222313,93226943	93207441,93210708,93212127,93214982,93215281,93218735,93219361,93220411,93222374,93227118	Gene ID= ENSG00000012963.14 TPM= 1.06 Transcript Type= nonsense_mediated_decay
chr14	93207229	93219457	93207229	93219457	+	transcript2876.chr14.nic@UBR7	transcript2876.chr14.nic	protein_coding	93207229,93209824,93210648,93212032,93214929,93215176,93218527	93207441,93209957,93210708,93212127,93214982,93215281,93219457	Gene ID= ENSG00000012963.14 TPM= 2.12 Transcript Type= NA
chr14	93287628	93333092	93287628	93333092	-	ENST00000298896.7@BTBD7	ENST00000298896.7	protein_coding	93332820,93295970,93293858,93287628	93333092,93296157,93294937,93288707	Gene ID= ENSG00000011114.14 TPM= 2.12 Transcript Type= protein_coding
chr14	93318949	93319824	93318949	93319824	+	transcript2887.chr14.nnic@NA	transcript2887.chr14.nnic	NA	93318949	93319824	Gene ID= novel_gene_chr14_2888 TPM= 2.12 Transcript Type= NA
chr14	93934150	93936829	93934150	93936829	-	transcript2912.chr14.nnic@NA	transcript2912.chr14.nnic	NA	93934150	93936829	Gene ID= novel_gene_chr14_2913 TPM= 7.79 Transcript Type= NA
chr14	93934166	93976738	93934166	93976738	-	transcript2891.chr14.nnic@ASB2	transcript2891.chr14.nnic	protein_coding	93976434,93969920,93964334,93956766,93954317,93953352,93950999,93947349,93939108,93937698,93934166	93976738,93969970,93964612,93956870,93954483,93953507,93951244,93947520,93939672,93937851,93934792	Gene ID= ENSG00000100628.11 TPM= 29.35 Transcript Type= NA
chr14	93934153	93976791	93934153	93976791	-	ENST00000555019.5@ASB2	ENST00000555019.5	protein_coding	93976434,93964334,93956766,93954317,93953352,93950999,93947349,93939108,93937698,93934153	93976791,93964612,93956870,93954483,93953507,93951244,93947520,93939672,93937851,93934792	Gene ID= ENSG00000100628.11 TPM= 223.99 Transcript Type= protein_coding
chr14	93962108	93976782	93962108	93976782	-	transcript2907.chr14.nic@ASB2	transcript2907.chr14.nic	protein_coding	93976434,93962108	93976782,93964612	Gene ID= ENSG00000100628.11 TPM= 9.56 Transcript Type= NA
chr14	93935499	93938289	93935499	93938289	+	transcript2908.chr14.nnic@NA	transcript2908.chr14.nnic	NA	93935499	93938289	Gene ID= novel_gene_chr14_2909 TPM= 3.19 Transcript Type= NA
chr14	93943807	93948016	93943807	93948016	+	transcript2910.chr14.nnic@NA	transcript2910.chr14.nnic	NA	93943807	93948016	Gene ID= novel_gene_chr14_2911 TPM= 50.98 Transcript Type= NA
chr14	93987224	94000028	93987224	94000028	+	transcript2916.chr14.nic@CCDC197	transcript2916.chr14.nic	protein_coding	93987224,93997205,93998115,93999583	93987396,93997293,93998235,94000028	Gene ID= ENSG00000175699.14 TPM= 2.12 Transcript Type= NA
chr14	93999983	94000238	93999983	94000238	+	transcript2921.chr14.nnic@NA	transcript2921.chr14.nnic	NA	93999983	94000238	Gene ID= novel_gene_chr14_2922 TPM= 3.19 Transcript Type= NA
chr14	94026329	94048930	94026329	94048930	+	ENST00000203664.9@OTUB2	ENST00000203664.9	protein_coding	94026329,94037380,94038963,94043971,94044586,94045716	94026540,94037475,94039081,94044055,94044780,94048930	Gene ID= ENSG00000089723.9 TPM= 1.06 Transcript Type= protein_coding
chr14	94048291	94081245	94048291	94081245	-	ENST00000621632.4@DDX24	ENST00000621632.4	protein_coding	94081119,94079025,94062097,94060913,94060098,94057822,94054996,94052998,94048291	94081245,94079747,94062621,94061066,94060613,94057897,94055184,94053127,94051462	Gene ID= ENSG00000089737.16 TPM= 169.95 Transcript Type= protein_coding
chr14	94073830	94078039	94073830	94078039	+	transcript2935.chr14.nnic@NA	transcript2935.chr14.nnic	NA	94073830	94078039	Gene ID= novel_gene_chr14_2936 TPM= 2.12 Transcript Type= NA
chr14	94081282	94102714	94081282	94102714	+	ENST00000555523.5@IFI27L1	ENST00000555523.5	protein_coding	94081282,94096887,94100739,94101814,94102477	94081449,94096965,94100771,94101975,94102714	Gene ID= ENSG00000165948.10 TPM= 5.31 Transcript Type= protein_coding
chr14	94110749	94116695	94110749	94116695	+	ENST00000621160.4@IFI27	ENST00000621160.4	protein_coding	94110749,94111625,94114851,94115781,94116442	94110797,94111773,94114880,94115942,94116695	Gene ID= ENSG00000165949.12 TPM= 22.31 Transcript Type= protein_coding
chr14	94110734	94116690	94110734	94116690	+	ENST00000618863.1@IFI27	ENST00000618863.1	protein_coding	94110734,94114851,94115781,94116442	94110797,94114880,94115942,94116690	Gene ID= ENSG00000165949.12 TPM= 14.87 Transcript Type= protein_coding
chr14	94127781	94129664	94127781	94129664	-	ENST00000238609.3@IFI27L2	ENST00000238609.3	protein_coding	94129558,94129262,94128514,94127781	94129664,94129291,94128675,94127992	Gene ID= ENSG00000119632.3 TPM= 94.53 Transcript Type= protein_coding
chr14	94127779	94129401	94127779	94129401	-	ENST00000555558.1@IFI27L2	ENST00000555558.1	protein_coding	94129262,94128514,94127779	94129401,94128675,94127992	Gene ID= ENSG00000119632.3 TPM= 12.75 Transcript Type= retained_intron
chr14	94378376	94390693	94378376	94390693	-	ENST00000393088.8@SERPINA1	ENST00000393088.8	protein_coding	94390457,94388801,94388560,94382592,94380871,94379464,94378376	94390693,94389010,94388663,94383241,94381141,94379611,94378640	Gene ID= ENSG00000197249.13 TPM= 1.06 Transcript Type= protein_coding
chr14	94376747	94390692	94376747	94390692	-	ENST00000355814.8@SERPINA1	ENST00000355814.8	protein_coding	94390420,94382592,94380871,94379464,94376747	94390692,94383241,94381141,94379611,94378640	Gene ID= ENSG00000197249.13 TPM= 1.06 Transcript Type= protein_coding
chr14	94581394	94593115	94581394	94593115	+	ENST00000554866.5@SERPINA5	ENST00000554866.5	protein_coding	94581394,94587346,94590041,94590749,94592057	94581490,94587981,94590311,94590896,94593115	Gene ID= ENSG00000188488.13 TPM= 3.19 Transcript Type= protein_coding
chr14	94612377	94624052	94612377	94624052	+	ENST00000393078.4@SERPINA3	ENST00000393078.4	protein_coding	94612377,94614434,94619195,94622341,94623611	94612447,94615084,94619468,94622491,94624052	Gene ID= ENSG00000196136.17 TPM= 10.62 Transcript Type= protein_coding
chr14	94768216	94770230	94768216	94770230	-	ENST00000238558.4@GSC	ENST00000238558.4	protein_coding	94769661,94768958,94768216	94770230,94769217,94768649	Gene ID= ENSG00000133937.4 TPM= 1.06 Transcript Type= protein_coding
chr14	95087161	95090182	95087161	95090182	+	transcript2957.chr14.nnic@NA	transcript2957.chr14.nnic	NA	95087161	95090182	Gene ID= novel_gene_chr14_2958 TPM= 6.37 Transcript Type= NA
chr14	95181940	95319906	95181940	95319906	-	ENST00000298912.8@CLMN	ENST00000298912.8	protein_coding	95319711,95230072,95223760,95221691,95215641,95213219,95210686,95209395,95202838,95196498,95194536,95193849,95181940	95319906,95230133,95223855,95221774,95215733,95213409,95210879,95209477,95204463,95196694,95194596,95193919,95191732	Gene ID= ENSG00000165959.11 TPM= 5.31 Transcript Type= protein_coding
chr14	95444117	95516688	95444117	95516688	-	transcript2964.chr14.nnic@SYNE3	transcript2964.chr14.nnic	protein_coding	95516596,95475678,95467795,95465931,95457177,95455377,95452247,95449931,95445909,95444117	95516688,95475835,95467967,95466240,95457338,95455724,95452383,95450105,95446091,95444628	Gene ID= ENSG00000176438.12 TPM= 2.12 Transcript Type= NA
chr14	95532912	95534784	95532912	95534784	-	transcript2973.chr14.nnic@NA	transcript2973.chr14.nnic	NA	95532912	95534784	Gene ID= novel_gene_chr14_2974 TPM= 5.31 Transcript Type= NA
chr14	95534593	95544718	95534593	95544718	+	ENST00000331334.4@GLRX5	ENST00000331334.4	protein_coding	95534593,95543947	95535384,95544718	Gene ID= ENSG00000182512.4 TPM= 115.78 Transcript Type= protein_coding
chr14	96039324	96093889	96039324	96093889	+	ENST00000555004.2@C14orf132	ENST00000555004.2	protein_coding	96039324,96086511	96039527,96093889	Gene ID= ENSG00000227051.6 TPM= 10.62 Transcript Type= protein_coding
chr14	96204795	96244164	96204795	96244164	+	ENST00000554311.1@BDKRB2	ENST00000554311.1	protein_coding	96204795,96237069,96240403	96204959,96237181,96244164	Gene ID= ENSG00000168398.6 TPM= 1.06 Transcript Type= protein_coding
chr14	96279202	96363870	96279202	96363870	-	ENST00000359933.5@ATG2B	ENST00000359933.5	protein_coding	96362815,96347179,96345233,96344654,96343119,96341522,96334405,96333688,96332501,96332305,96331376,96329484,96328674,96328347,96325649,96323896,96322540,96322112,96317698,96317145,96316533,96315384,96315154,96313329,96313065,96312089,96311542,96311117,96309453,96306714,96305589,96304495,96303061,96302007,96295482,96294960,96292029,96291600,96290814,96290436,96289656,96279202	96363870,96347341,96345385,96344756,96343281,96341701,96334501,96333873,96332655,96332410,96331637,96329634,96328766,96328535,96325922,96323998,96322735,96322254,96317855,96317317,96316683,96315583,96315234,96313435,96313157,96312159,96311618,96311287,96309594,96306916,96305815,96304603,96303255,96302108,96295560,96295167,96292098,96291682,96290935,96290590,96289805,96285985	Gene ID= ENSG00000066739.11 TPM= 1.06 Transcript Type= protein_coding
chr14	96319803	96320530	96319803	96320530	+	transcript2982.chr14.nnic@NA	transcript2982.chr14.nnic	NA	96319803	96320530	Gene ID= novel_gene_chr14_2983 TPM= 2.12 Transcript Type= NA
chr14	96363477	96387288	96363477	96387288	+	ENST00000555181.5@GSKIP	ENST00000555181.5	protein_coding	96363477,96379688,96382247,96385523	96363568,96379788,96382505,96387288	Gene ID= ENSG00000100744.14 TPM= 14.87 Transcript Type= protein_coding
chr14	96502398	96567103	96502398	96567103	+	transcript2993.chr14.nic@PAPOLA	transcript2993.chr14.nic	protein_coding	96502398,96520055,96521006,96525310,96527430,96527953,96531475,96532331,96532511,96534491,96535879,96536976,96542243,96542774,96544149,96547797,96552480,96555847,96556175,96564955	96502600,96520228,96521072,96525391,96527539,96528006,96531586,96532420,96532649,96534563,96535999,96537060,96542296,96542893,96544258,96547918,96552622,96555947,96556413,96567103	Gene ID= ENSG00000090060.17 TPM= 4.25 Transcript Type= NA
chr14	96502347	96537904	96502347	96537904	+	transcript2997.chr14.nic@PAPOLA	transcript2997.chr14.nic	protein_coding	96502347,96520055,96521006,96525310,96527430,96527953,96531475,96532331,96532511,96534491,96535879,96536976	96502600,96520228,96521072,96525391,96527539,96528006,96531586,96532420,96532649,96534563,96535999,96537904	Gene ID= ENSG00000090060.17 TPM= 4.25 Transcript Type= NA
chr14	96502373	96567111	96502373	96567111	+	ENST00000216277.12@PAPOLA	ENST00000216277.12	protein_coding	96502373,96520055,96521006,96525310,96527430,96527953,96531475,96532331,96532511,96534491,96535879,96536976,96542243,96542774,96544149,96547797,96552480,96555847,96556175,96560649,96562819,96564955	96502600,96520228,96521072,96525391,96527539,96528006,96531586,96532420,96532649,96534563,96535999,96537060,96542296,96542893,96544258,96547918,96552622,96555947,96556413,96560711,96562893,96567111	Gene ID= ENSG00000090060.17 TPM= 60.54 Transcript Type= protein_coding
chr14	96502401	96534885	96502401	96534885	+	ENST00000557320.5@PAPOLA	ENST00000557320.5	protein_coding	96502401,96520055,96521006,96525310,96527430,96527953,96531475,96532331,96532511	96502600,96520228,96521072,96525391,96527539,96528006,96531586,96532420,96534885	Gene ID= ENSG00000090060.17 TPM= 18.06 Transcript Type= protein_coding
chr14	96557748	96563337	96557748	96563337	-	transcript3005.chr14.nnic@NA	transcript3005.chr14.nnic	NA	96557748	96563337	Gene ID= novel_gene_chr14_3006 TPM= 4.25 Transcript Type= NA
chr14	96797304	96881613	96797304	96881613	+	ENST00000216639.7@VRK1	ENST00000216639.7	protein_coding	96797304,96833467,96837762,96846095,96847257,96852831,96853074,96855224,96856130,96856528,96860557,96876030,96881177	96797447,96833631,96837817,96846164,96847344,96852939,96853166,96855356,96856250,96856586,96860735,96876120,96881613	Gene ID= ENSG00000100749.7 TPM= 7.44 Transcript Type= protein_coding
chr14	99397746	99480921	99397746	99480921	-	transcript3019.chr14.nic@SETD3	transcript3019.chr14.nic	protein_coding	99480728,99465703,99463486,99461192,99459113,99458279,99406516,99405205,99404225,99400099,99397746	99480921,99465813,99463578,99461340,99459185,99458535,99406590,99405371,99404310,99400259,99399125	Gene ID= ENSG00000183576.12 TPM= 8.32 Transcript Type= NA
chr14	99397746	99480879	99397746	99480879	-	ENST00000331768.9@SETD3	ENST00000331768.9	protein_coding	99480728,99465703,99463486,99461192,99459113,99458279,99413876,99412951,99406516,99405205,99404225,99400099,99397746	99480879,99465813,99463578,99461340,99459185,99458535,99413934,99413065,99406590,99405371,99404310,99400259,99399125	Gene ID= ENSG00000183576.12 TPM= 246.24 Transcript Type= protein_coding
chr14	99409804	99480788	99409804	99480788	-	ENST00000329331.7@SETD3	ENST00000329331.7	protein_coding	99480728,99465703,99463486,99461192,99459113,99458279,99413876,99412951,99409804	99480788,99465813,99463578,99461340,99459185,99458535,99413934,99413065,99410215	Gene ID= ENSG00000183576.12 TPM= 2.47 Transcript Type= protein_coding
chr14	99481413	99483393	99481413	99483393	+	transcript3024.chr14.nnic@NA	transcript3024.chr14.nnic	NA	99481413	99483393	Gene ID= novel_gene_chr14_3025 TPM= 3.19 Transcript Type= NA
chr14	99510959	99511313	99510959	99511313	+	transcript3031.chr14.nnic@NA	transcript3031.chr14.nnic	NA	99510959	99511313	Gene ID= novel_gene_chr14_3032 TPM= 5.31 Transcript Type= NA
chr14	99511262	99513824	99511262	99513824	-	transcript3033.chr14.nnic@NA	transcript3033.chr14.nnic	NA	99511262	99513824	Gene ID= novel_gene_chr14_3034 TPM= 5.31 Transcript Type= NA
chr14	99684314	99727301	99684314	99727301	+	ENST00000261835.7@CYP46A1	ENST00000261835.7	protein_coding	99684314,99691081,99691780,99699466,99700015,99706647,99707568,99715810,99716137,99718054,99721239,99721956,99725391,99726190,99726557	99684536,99691161,99691861,99699539,99700101,99706785,99707678,99715960,99716199,99718126,99721323,99722066,99725479,99726256,99727301	Gene ID= ENSG00000036530.8 TPM= 6.37 Transcript Type= protein_coding
chr14	99737685	99942060	99737685	99942060	+	transcript3048.chr14.nnic@EML1	transcript3048.chr14.nnic	protein_coding	99737685,99850853,99865514,99878485,99891199,99892139,99894629,99897145,99898233,99900929,99907638,99909345,99910242,99911422,99914179,99914566,99917782,99920789,99936029,99936247,99937817,99939197,99939987	99737860,99851035,99865646,99878619,99891227,99892195,99894758,99897294,99898302,99901039,99907733,99909479,99910341,99911576,99914304,99914697,99917849,99920877,99936126,99936334,99937912,99939327,99942060	Gene ID= ENSG00000066629.16 TPM= 4.25 Transcript Type= NA
chr14	99971449	100144236	99971449	100144236	+	ENST00000402714.6@EVL	ENST00000402714.6	protein_coding	99971449,100084687,100097481,100123539,100126707,100128519,100129563,100132719,100135905,100137578,100137740,100141180,100141736,100143701	99972057,100084855,100097658,100123602,100126771,100128748,100129684,100132779,100135968,100137644,100137802,100141246,100141793,100144236	Gene ID= ENSG00000196405.12 TPM= 30.8 Transcript Type= protein_coding
chr14	100238298	100239089	100238298	100239089	-	transcript3071.chr14.nnic@NA	transcript3071.chr14.nnic	NA	100238298	100239089	Gene ID= novel_gene_chr14_3072 TPM= 7.44 Transcript Type= NA
chr14	100238985	100282792	100238985	100282792	+	ENST00000262238.8@YY1	ENST00000262238.8	protein_coding	100238985,100262304,100274698,100276490,100277418	100239923,100262466,100274758,100276648,100282792	Gene ID= ENSG00000100811.12 TPM= 8.5 Transcript Type= protein_coding
chr14	100291111	100306533	100291111	100306533	-	ENST00000359232.7@SLC25A29	ENST00000359232.7	protein_coding	100306199,100298842,100293294,100291111	100306533,100298885,100293377,100293032	Gene ID= ENSG00000197119.12 TPM= 58.42 Transcript Type= protein_coding
chr14	100291116	100296545	100291116	100296545	-	ENST00000554912.1@SLC25A29	ENST00000554912.1	protein_coding	100293294,100291116	100296545,100293032	Gene ID= ENSG00000197119.12 TPM= 20.18 Transcript Type= protein_coding
chr14	100302777	100305792	100302777	100305792	-	transcript3082.chr14.nnic@NA	transcript3082.chr14.nnic	NA	100302777	100305792	Gene ID= novel_gene_chr14_3083 TPM= 2.12 Transcript Type= NA
chr14	100333818	100376805	100333818	100376805	-	ENST00000355338.6@WARS	ENST00000355338.6	protein_coding	100376260,100369087,100361708,100360554,100354447,100353687,100346746,100343275,100342398,100337062,100333818	100376805,100369258,100361921,100360662,100354566,100353869,100346846,100343387,100342571,100337202,100335036	Gene ID= ENSG00000140105.17 TPM= 14.87 Transcript Type= protein_coding
chr14	100333828	100375608	100333828	100375608	-	ENST00000344102.9@WARS	ENST00000344102.9	protein_coding	100375283,100361708,100360554,100354447,100353687,100346746,100343275,100342398,100337062,100333828	100375608,100361921,100360662,100354566,100353869,100346846,100343387,100342571,100337202,100335036	Gene ID= ENSG00000140105.17 TPM= 5.31 Transcript Type= protein_coding
chr14	100333802	100376335	100333802	100376335	-	ENST00000358655.8@WARS	ENST00000358655.8	protein_coding	100376260,100361708,100360554,100354447,100353687,100346746,100343275,100342398,100337062,100333802	100376335,100361921,100360662,100354566,100353869,100346846,100343387,100342571,100337202,100335036	Gene ID= ENSG00000140105.17 TPM= 10.09 Transcript Type= protein_coding
chr14	100333788	100375644	100333788	100375644	-	ENST00000392882.6@WARS	ENST00000392882.6	protein_coding	100375283,100369087,100361708,100360554,100354447,100353687,100346746,100343275,100342398,100337062,100333788	100375644,100369258,100361921,100360662,100354566,100353869,100346846,100343387,100342571,100337202,100335036	Gene ID= ENSG00000140105.17 TPM= 96.13 Transcript Type= protein_coding
chr14	100376439	100530303	100376439	100530303	+	ENST00000402312.7@WDR25	ENST00000402312.7	protein_coding	100376439,100380910,100468021,100483994,100525870,100529068,100529820	100376495,100381746,100468168,100484124,100526040,100529208,100530303	Gene ID= ENSG00000176473.13 TPM= 6.37 Transcript Type= protein_coding
chr14	100376494	100530303	100376494	100530303	+	ENST00000335290.10@WDR25	ENST00000335290.10	protein_coding	100376494,100380910,100468021,100483994,100525870,100529068,100529820	100376704,100381746,100468168,100484124,100526040,100529208,100530303	Gene ID= ENSG00000176473.13 TPM= 4.25 Transcript Type= protein_coding
chr14	100726827	100738224	100726827	100738224	+	ENST00000341267.8@DLK1	ENST00000341267.8	protein_coding	100726827,100728396,100728936,100732042,100734149	100727135,100728459,100729066,100732183,100738224	Gene ID= ENSG00000185559.13 TPM= 1.06 Transcript Type= protein_coding
chr14	100826108	100861023	100826108	100861023	+	ENST00000429159.6@MEG3	ENST00000429159.6	lincRNA	100826108,100828708,100829034,100832512,100836167,100845458,100860691	100826217,100828816,100829749,100832641,100836300,100845533,100861023	Gene ID= ENSG00000214548.14 TPM= 2.12 Transcript Type= lincRNA
chr14	100826126	100861031	100826126	100861031	+	ENST00000451743.6@MEG3	ENST00000451743.6	lincRNA	100826126,100828708,100829034,100831421,100836167,100845458,100860691	100826217,100828816,100829749,100831534,100836300,100845533,100861031	Gene ID= ENSG00000214548.14 TPM= 7.44 Transcript Type= lincRNA
chr14	100949833	100949904	100949833	100949904	+	ENST00000362705.1@SNORD114-1	ENST00000362705.1	snoRNA	100949833	100949904	Gene ID= ENSG00000199575.1 TPM= 1.06 Transcript Type= snoRNA
chr14	101761647	101927977	101761647	101927977	+	transcript3124.chr14.nic@PPP2R5C	transcript3124.chr14.nic	protein_coding	101761647,101762905,101786018,101856686,101882161,101883257,101883432,101890237,101893000,101894507,101901719,101906402,101909589,101912401,101917831,101925141	101761920,101762970,101786183,101856885,101882271,101883349,101883562,101890296,101893108,101894560,101901889,101906529,101909690,101912473,101917947,101927977	Gene ID= ENSG00000078304.19 TPM= 5.84 Transcript Type= NA
chr14	101761647	101912625	101761647	101912625	+	transcript3132.chr14.nic@PPP2R5C	transcript3132.chr14.nic	protein_coding	101761647,101762905,101786018,101856686,101882161,101883257,101883432,101890237,101893000,101894507,101901719,101906402,101909589,101912401	101761920,101762970,101786183,101856885,101882271,101883349,101883562,101890296,101893108,101894560,101901889,101906529,101909690,101912625	Gene ID= ENSG00000078304.19 TPM= 32.22 Transcript Type= NA
chr14	101809803	101927519	101809803	101927519	+	ENST00000350249.7@PPP2R5C	ENST00000350249.7	protein_coding	101809803,101856686,101882161,101883257,101883432,101890237,101893000,101894507,101901719,101906402,101909589,101912401,101925141	101810036,101856885,101882271,101883349,101883562,101890296,101893108,101894560,101901889,101906529,101909690,101912473,101927519	Gene ID= ENSG00000078304.19 TPM= 6.37 Transcript Type= protein_coding
chr14	101761647	101838467	101761647	101838467	+	transcript3157.chr14.nic@PPP2R5C	transcript3157.chr14.nic	protein_coding	101761647,101762905,101786018,101836169	101761920,101762970,101786183,101838467	Gene ID= ENSG00000078304.19 TPM= 9.56 Transcript Type= NA
chr14	101809835	101836701	101809835	101836701	+	ENST00000556946.1@PPP2R5C	ENST00000556946.1	protein_coding	101809835,101836169	101810036,101836701	Gene ID= ENSG00000078304.19 TPM= 3.19 Transcript Type= protein_coding
chr14	101761862	101836573	101761862	101836573	+	ENST00000554442.5@PPP2R5C	ENST00000554442.5	protein_coding	101761862,101762905,101786018,101831701,101836169	101761920,101762970,101786183,101831804,101836573	Gene ID= ENSG00000078304.19 TPM= 1.06 Transcript Type= protein_coding
chr14	101809895	101912625	101809895	101912625	+	ENST00000445439.7@PPP2R5C	ENST00000445439.7	protein_coding	101809895,101856686,101882161,101883257,101883432,101890237,101893000,101894507,101901719,101906402,101909589,101912401	101810036,101856885,101882271,101883349,101883562,101890296,101893108,101894560,101901889,101906529,101909690,101912625	Gene ID= ENSG00000078304.19 TPM= 15.22 Transcript Type= protein_coding
chr14	101809895	101927977	101809895	101927977	+	ENST00000334743.9@PPP2R5C	ENST00000334743.9	protein_coding	101809895,101856686,101882161,101883257,101883432,101890237,101893000,101894507,101901719,101906402,101909589,101912401,101917831,101925141	101810036,101856885,101882271,101883349,101883562,101890296,101893108,101894560,101901889,101906529,101909690,101912473,101917947,101927977	Gene ID= ENSG00000078304.19 TPM= 17.53 Transcript Type= protein_coding
chr14	101764803	101765378	101764803	101765378	-	transcript3165.chr14.nnic@NA	transcript3165.chr14.nnic	NA	101764803	101765378	Gene ID= novel_gene_chr14_3166 TPM= 11.68 Transcript Type= NA
chr14	101948347	101949425	101948347	101949425	+	ENST00000607414.1@AL118558.3	ENST00000607414.1	lincRNA	101948347	101949425	Gene ID= ENSG00000271780.1 TPM= 3.19 Transcript Type= lincRNA
chr14	101964469	101983472	101964469	101983472	+	transcript3172.chr14.nic@DYNC1H1	transcript3172.chr14.nic	protein_coding	101964469,101975712,101979319,101979719,101980364,101983019,101983382	101964947,101975799,101979492,101979974,101980550,101983290,101983472	Gene ID= ENSG00000197102.10 TPM= 88.16 Transcript Type= NA
chr14	101964528	102050791	101964528	102050791	+	ENST00000360184.8@DYNC1H1	ENST00000360184.8	protein_coding	101964528,101975712,101979319,101979719,101980364,101983019,101983382,101985687,101987453,101988703,101991527,101994184,101994673,101994986,101995181,101997035,101999989,102000286,102000954,102001145,102001535,102002537,102002792,102004518,102004762,102005042,102005888,102007008,102008178,102009843,102010276,102010740,102011875,102012314,102015105,102015856,102016349,102016766,102017088,102017383,102018451,102019893,102022751,102026574,102027174,102027383,102027619,102027937,102029539,102029819,102030162,102032272,102033065,102033269,102033976,102034325,102036489,102038460,102038698,102039001,102039412,102039638,102040236,102040598,102041574,102042013,102042228,102042384,102042635,102043875,102044274,102044595,102047817,102048516,102049440,102049714,102050071,102050435	101964947,101975799,101979492,101979974,101980550,101983290,101983609,101986763,101987632,101988852,101991673,101994324,101994849,101995096,101995300,101997274,102000144,102000399,102001064,102001354,102001681,102002703,102002965,102004683,102004950,102005236,102006170,102007108,102008337,102010086,102010459,102010952,102012113,102012470,102015332,102016086,102016489,102016999,102017294,102017504,102018616,102020056,102022880,102026707,102027288,102027544,102027833,102028141,102029712,102029938,102030282,102032467,102033182,102033484,102034188,102034452,102036642,102038606,102038848,102039254,102039546,102039732,102040410,102040673,102041734,102042124,102042288,102042507,102042748,102044045,102044491,102044698,102048028,102048669,102049582,102049882,102050198,102050791	Gene ID= ENSG00000197102.10 TPM= 322.9 Transcript Type= protein_coding
chr14	101964573	101966420	101964573	101966420	+	transcript3177.chr14.nnic@NA	transcript3177.chr14.nnic	NA	101964573	101966420	Gene ID= novel_gene_chr14_3178 TPM= 4.25 Transcript Type= NA
chr14	102048542	102050790	102048542	102050790	+	transcript3179.chr14.nnic@NA	transcript3179.chr14.nnic	NA	102048542	102050790	Gene ID= novel_gene_chr14_3180 TPM= 10.62 Transcript Type= NA
chr14	102083113	102087531	102083113	102087531	-	transcript3185.chr14.nic@HSP90AA1	transcript3185.chr14.nic	protein_coding	102086986,102086217,102085758,102085298,102084681,102084399,102083793,102083546,102083113	102087531,102086378,102086124,102085431,102084998,102084564,102083983,102083693,102083302	Gene ID= ENSG00000080824.18 TPM= 22.66 Transcript Type= NA
chr14	102139844	102223673	102139844	102223673	+	ENST00000335263.9@WDR20	ENST00000335263.9	protein_coding	102139844,102194938,102208603,102222830	102140172,102195120,102209862,102223673	Gene ID= ENSG00000140153.17 TPM= 5.84 Transcript Type= protein_coding
chr14	102139901	102210530	102139901	102210530	+	transcript3207.chr14.nic@WDR20	transcript3207.chr14.nic	protein_coding	102139901,102193463,102194938,102208603	102140172,102193514,102195120,102210530	Gene ID= ENSG00000140153.17 TPM= 6.55 Transcript Type= NA
chr14	102139879	102210521	102139879	102210521	+	transcript3210.chr14.nic@WDR20	transcript3210.chr14.nic	protein_coding	102139879,102194938,102208862	102140172,102195120,102210521	Gene ID= ENSG00000140153.17 TPM= 2.84 Transcript Type= NA
chr14	102139879	102223673	102139879	102223673	+	transcript3211.chr14.nic@WDR20	transcript3211.chr14.nic	protein_coding	102139879,102194938,102222830	102140172,102195120,102223673	Gene ID= ENSG00000140153.17 TPM= 3.19 Transcript Type= NA
chr14	102139912	102223673	102139912	102223673	+	transcript3213.chr14.nnic@WDR20	transcript3213.chr14.nnic	protein_coding	102139912,102221557,102222830	102140172,102221658,102223673	Gene ID= ENSG00000140153.17 TPM= 2.12 Transcript Type= NA
chr14	102139893	102210530	102139893	102210530	+	ENST00000342702.7@WDR20	ENST00000342702.7	protein_coding	102139893,102194938,102208603	102140172,102195120,102210530	Gene ID= ENSG00000140153.17 TPM= 8.15 Transcript Type= protein_coding
chr14	102319711	102342367	102319711	102342367	+	transcript3216.chr14.nnic@ZNF839	transcript3216.chr14.nnic	protein_coding	102319711,102322233,102325985,102331622,102334554,102335689,102338816,102339094,102341323	102320053,102322334,102326887,102331846,102334646,102335838,102338953,102339223,102342367	Gene ID= ENSG00000022976.15 TPM= 3.19 Transcript Type= NA
chr14	102319732	102342364	102319732	102342364	+	transcript3218.chr14.nic@ZNF839	transcript3218.chr14.nic	protein_coding	102319732,102325985,102331622,102334554,102335689,102338816,102339094,102342103	102320053,102326887,102331846,102334646,102335838,102338953,102339223,102342364	Gene ID= ENSG00000022976.15 TPM= 3.19 Transcript Type= NA
chr14	102319751	102342367	102319751	102342367	+	ENST00000442396.6@ZNF839	ENST00000442396.6	protein_coding	102319751,102325985,102331622,102334554,102335689,102338816,102339094,102341323	102320053,102326887,102331846,102334646,102335838,102338953,102339223,102342367	Gene ID= ENSG00000022976.15 TPM= 4.25 Transcript Type= protein_coding
chr14	102341102	102362916	102341102	102362916	-	ENST00000559514.5@CINP	ENST00000559514.5	protein_coding	102362845,102359419,102355768,102349919,102348279,102341102	102362916,102359587,102355897,102350048,102348759,102344389	Gene ID= ENSG00000100865.14 TPM= 4.25 Transcript Type= nonsense_mediated_decay
chr14	102348282	102362892	102348282	102362892	-	ENST00000216756.10@CINP	ENST00000216756.10	protein_coding	102362845,102359419,102355768,102349919,102348282	102362892,102359587,102355897,102350048,102348759	Gene ID= ENSG00000100865.14 TPM= 36.11 Transcript Type= protein_coding
chr14	102362939	102432097	102362939	102432097	+	transcript3220.chr14.nic@TECPR2	transcript3220.chr14.nic	protein_coding	102362939,102376650,102407338,102408488,102414636,102424979,102428250,102431796	102363116,102376940,102407466,102408619,102414793,102425291,102428382,102432097	Gene ID= ENSG00000196663.15 TPM= 13.81 Transcript Type= NA
chr14	102501760	102509791	102501760	102509791	-	ENST00000286918.8@ANKRD9	ENST00000286918.8	protein_coding	102509529,102508641,102508475,102501760	102509791,102508846,102508549,102507942	Gene ID= ENSG00000156381.8 TPM= 9.56 Transcript Type= protein_coding
chr14	102506876	102509799	102506876	102509799	-	ENST00000560748.5@ANKRD9	ENST00000560748.5	protein_coding	102509529,102508475,102506876	102509799,102508549,102507942	Gene ID= ENSG00000156381.8 TPM= 268.38 Transcript Type= protein_coding
chr14	102592661	102730576	102592661	102730576	+	ENST00000262241.6@RCOR1	ENST00000262241.6	protein_coding	102592661,102593266,102681895,102701278,102707351,102708465,102710935,102714423,102721007,102721320,102722187,102726468	102593187,102593325,102681978,102701330,102707512,102708583,102711013,102714617,102721084,102721377,102722416,102730576	Gene ID= ENSG00000089902.9 TPM= 11.68 Transcript Type= protein_coding
chr14	102777557	102906261	102777557	102906261	+	ENST00000392745.6@TRAF3	ENST00000392745.6	protein_coding	102777557,102830334,102870185,102871917,102875624,102876358,102886189,102889560,102891325,102897261,102903255,102905213	102777675,102830472,102870446,102871968,102875728,102876525,102886269,102889634,102891417,102897401,102903429,102906261	Gene ID= ENSG00000131323.14 TPM= 3.19 Transcript Type= protein_coding
chr14	102963107	103057579	102963107	103057579	-	transcript3255.chr14.nic@CDC42BPB	transcript3255.chr14.nic	protein_coding	103056999,103012097,103008472,103003928,102999565,102986487,102983556,102980773,102978126,102975883,102975684,102974016,102971919,102970151,102968472,102968253,102967046,102966282,102964502,102963107	103057579,103012188,103008555,103004023,102999713,102986580,102983756,102981021,102978205,102976049,102975803,102974149,102972161,102970261,102968716,102968358,102967170,102966387,102964650,102963155	Gene ID= ENSG00000198752.10 TPM= 4.25 Transcript Type= NA
chr14	102932898	102935782	102932898	102935782	+	transcript3260.chr14.nnic@NA	transcript3260.chr14.nnic	NA	102932898	102935782	Gene ID= novel_gene_chr14_3261 TPM= 9.56 Transcript Type= NA
chr14	103334002	103345025	103334002	103345025	+	ENST00000216554.7@EIF5	ENST00000216554.7	protein_coding	103334002,103334389,103335653,103336036,103336677,103337116,103338327,103338735,103339172,103339639,103340427,103340963	103334260,103334597,103335932,103336117,103336849,103337227,103338472,103338893,103339333,103339803,103340561,103345025	Gene ID= ENSG00000100664.10 TPM= 10.62 Transcript Type= protein_coding
chr14	103334184	103343171	103334184	103343171	+	transcript3280.chr14.nic@EIF5	transcript3280.chr14.nic	protein_coding	103334184,103335653,103336036,103336677,103337116,103338327,103338735,103339172,103339639,103340427,103340963	103334260,103335932,103336117,103336849,103337227,103338472,103338893,103339333,103339803,103340561,103343171	Gene ID= ENSG00000100664.10 TPM= 15.93 Transcript Type= NA
chr14	103385380	103503826	103385380	103503826	+	transcript3308.chr14.nic@MARK3	transcript3308.chr14.nic	protein_coding	103385380,103405076,103428387,103448919,103451918,103457142,103462405,103465557,103465972,103466343,103467079,103468081,103474993,103480387,103491777,103498502,103500156,103502882	103386080,103405267,103428440,103448967,103451983,103457212,103462461,103465793,103466091,103466442,103467191,103468186,103475210,103480490,103492034,103498528,103500200,103503826	Gene ID= ENSG00000075413.17 TPM= 8.36 Transcript Type= NA
chr14	103385520	103503826	103385520	103503826	+	ENST00000429436.6@MARK3	ENST00000429436.6	protein_coding	103385520,103405076,103428387,103448919,103451918,103457142,103462405,103465557,103465972,103466343,103467079,103468033,103474993,103480387,103491777,103498502,103500156,103502882	103386080,103405267,103428440,103448967,103451983,103457212,103462461,103465793,103466091,103466442,103467191,103468186,103475210,103480490,103492034,103498528,103500200,103503826	Gene ID= ENSG00000075413.17 TPM= 4.96 Transcript Type= protein_coding
chr14	103452473	103455552	103452473	103455552	-	transcript3356.chr14.nnic@NA	transcript3356.chr14.nnic	NA	103452473	103455552	Gene ID= novel_gene_chr14_3357 TPM= 4.25 Transcript Type= NA
chr14	103488632	103490527	103488632	103490527	+	transcript3354.chr14.nnic@NA	transcript3354.chr14.nnic	NA	103488632	103490527	Gene ID= novel_gene_chr14_3355 TPM= 3.19 Transcript Type= NA
chr14	103519659	103523111	103519659	103523111	-	ENST00000348956.6@CKB	ENST00000348956.6	protein_coding	103522766,103522301,103522023,103521818,103521263,103520469,103520122,103519659	103523111,103522505,103522177,103521950,103521434,103520592,103520311,103520042	Gene ID= ENSG00000166165.12 TPM= 683.77 Transcript Type= protein_coding
chr14	103519679	103521443	103519679	103521443	-	ENST00000554282.5@CKB	ENST00000554282.5	protein_coding	103521263,103520122,103519679	103521443,103520311,103520042	Gene ID= ENSG00000166165.12 TPM= 8.5 Transcript Type= retained_intron
chr14	103525010	103529072	103525010	103529072	-	ENST00000568177.1@AL133367.1	ENST00000568177.1	antisense_RNA	103525010	103529072	Gene ID= ENSG00000260285.1 TPM= 5.31 Transcript Type= antisense_RNA
chr14	103529184	103537073	103529184	103537073	+	ENST00000389749.8@TRMT61A	ENST00000389749.8	protein_coding	103529184,103529950,103532582,103534550	103529261,103530309,103532848,103537073	Gene ID= ENSG00000166166.12 TPM= 4.25 Transcript Type= protein_coding
chr14	103540314	103545409	103540314	103545409	-	transcript3367.chr14.nnic@NA	transcript3367.chr14.nnic	NA	103540314	103545409	Gene ID= novel_gene_chr14_3368 TPM= 8.5 Transcript Type= NA
chr14	103546618	103548033	103546618	103548033	+	transcript3365.chr14.nnic@NA	transcript3365.chr14.nnic	NA	103546618	103548033	Gene ID= novel_gene_chr14_3366 TPM= 5.31 Transcript Type= NA
chr14	103547878	103548827	103547878	103548827	-	transcript3369.chr14.nnic@NA	transcript3369.chr14.nnic	NA	103547878	103548827	Gene ID= novel_gene_chr14_3370 TPM= 2.12 Transcript Type= NA
chr14	103562968	103590896	103562968	103590896	+	transcript3372.chr14.nic@APOPT1	transcript3372.chr14.nic	protein_coding	103562968,103571623,103574107,103579371,103587274,103590181	103563124,103571820,103574170,103579491,103587364,103590896	Gene ID= ENSG00000256053.7 TPM= 6.9 Transcript Type= NA
chr14	103562965	103590504	103562965	103590504	+	ENST00000440963.1@APOPT1	ENST00000440963.1	protein_coding	103562965,103587274,103590181	103563124,103587364,103590504	Gene ID= ENSG00000256053.7 TPM= 7.44 Transcript Type= protein_coding
chr14	103562979	103590527	103562979	103590527	+	ENST00000458117.5@APOPT1	ENST00000458117.5	protein_coding	103562979,103571623,103587274,103590181	103563124,103571820,103587364,103590527	Gene ID= ENSG00000256053.7 TPM= 4.25 Transcript Type= nonsense_mediated_decay
chr14	103582739	103584752	103582739	103584752	-	transcript3398.chr14.nnic@NA	transcript3398.chr14.nnic	NA	103582739	103584752	Gene ID= novel_gene_chr14_3399 TPM= 2.12 Transcript Type= NA
chr14	103629170	103701544	103629170	103701544	+	transcript3404.chr14.nnic@KLC1	transcript3404.chr14.nnic	protein_coding	103629170,103654564,103657546,103662116,103662702,103669511,103670182,103673014,103673332,103675552,103675689,103677415,103679408,103687081,103700655,103701201	103629494,103654825,103657776,103662194,103662927,103669598,103670283,103673187,103673431,103675601,103675756,103677523,103679518,103687211,103700727,103701544	Gene ID= ENSG00000126214.21 TPM= 13.3 Transcript Type= NA
chr14	103629170	103685896	103629170	103685896	+	transcript3413.chr14.nnic@KLC1	transcript3413.chr14.nnic	protein_coding	103629170,103654564,103657546,103662116,103662702,103669511,103670182,103673014,103673332,103675552,103675689,103677415,103679408,103684986,103685638	103629494,103654825,103657776,103662194,103662927,103669598,103670283,103673187,103673431,103675601,103675756,103677523,103679518,103685036,103685896	Gene ID= ENSG00000126214.21 TPM= 7.99 Transcript Type= NA
chr14	103629177	103714249	103629177	103714249	+	ENST00000348520.10@KLC1	ENST00000348520.10	protein_coding	103629177,103654564,103657546,103662116,103662702,103669511,103670182,103673014,103673332,103675552,103675689,103677415,103679384,103700655,103701201	103629494,103654825,103657776,103662194,103662927,103669598,103670283,103673187,103673431,103675601,103675756,103677523,103679545,103700727,103714249	Gene ID= ENSG00000126214.21 TPM= 10.96 Transcript Type= protein_coding
chr14	103629227	103686917	103629227	103686917	+	ENST00000389744.8@KLC1	ENST00000389744.8	protein_coding	103629227,103654564,103657546,103662116,103662702,103669511,103670182,103673014,103673332,103675552,103675689,103677415,103679384,103684986,103685638	103629494,103654825,103657776,103662194,103662927,103669598,103670283,103673187,103673431,103675601,103675756,103677523,103679545,103685036,103686917	Gene ID= ENSG00000126214.21 TPM= 1.4 Transcript Type= protein_coding
chr14	103629241	103701514	103629241	103701514	+	ENST00000557450.5@KLC1	ENST00000557450.5	protein_coding	103629241,103654564,103657546,103662116,103662702,103669511,103670182,103673014,103673332,103675552,103675689,103677415,103679384,103700655,103701201	103629494,103654825,103657776,103662194,103662927,103669598,103670283,103673187,103673431,103675601,103675756,103677523,103679518,103700727,103701514	Gene ID= ENSG00000126214.21 TPM= 46.82 Transcript Type= protein_coding
chr14	103629241	103701544	103629241	103701544	+	ENST00000452929.6@KLC1	ENST00000452929.6	protein_coding	103629241,103654564,103657546,103662116,103662702,103669511,103670182,103673014,103673332,103675552,103675689,103677415,103679384,103687081,103700655,103701201	103629494,103654825,103657776,103662194,103662927,103669598,103670283,103673187,103673431,103675601,103675756,103677523,103679545,103687211,103700727,103701544	Gene ID= ENSG00000126214.21 TPM= 25.58 Transcript Type= protein_coding
chr14	103629241	103701544	103629241	103701544	+	ENST00000554280.5@KLC1	ENST00000554280.5	protein_coding	103629241,103654564,103657546,103662116,103662702,103669511,103670182,103673014,103673332,103675552,103675689,103677415,103679384,103687081,103700655,103701201	103629494,103654825,103657776,103662194,103662927,103669598,103670283,103673187,103673431,103675601,103675756,103677523,103679518,103687211,103700727,103701544	Gene ID= ENSG00000126214.21 TPM= 30.89 Transcript Type= protein_coding
chr14	103629237	103685916	103629237	103685916	+	ENST00000557575.5@KLC1	ENST00000557575.5	protein_coding	103629237,103654564,103657546,103662116,103662702,103669511,103670182,103673014,103673332,103675552,103675689,103677415,103679384,103685638	103629494,103654825,103657776,103662194,103662927,103669598,103670283,103673187,103673431,103675601,103675756,103677523,103679545,103685916	Gene ID= ENSG00000126214.21 TPM= 4.45 Transcript Type= protein_coding
chr14	103629217	103630266	103629217	103630266	+	transcript3448.chr14.nnic@NA	transcript3448.chr14.nnic	NA	103629217	103630266	Gene ID= novel_gene_chr14_3449 TPM= 2.12 Transcript Type= NA
chr14	103663085	103665592	103663085	103665592	-	transcript3458.chr14.nnic@NA	transcript3458.chr14.nnic	NA	103663085	103665592	Gene ID= novel_gene_chr14_3459 TPM= 3.19 Transcript Type= NA
chr14	103691460	103694030	103691460	103694030	-	transcript3454.chr14.nnic@NA	transcript3454.chr14.nnic	NA	103691460	103694030	Gene ID= novel_gene_chr14_3455 TPM= 82.85 Transcript Type= NA
chr14	103693500	103695134	103693500	103695134	+	transcript3452.chr14.nnic@NA	transcript3452.chr14.nnic	NA	103693500	103695134	Gene ID= novel_gene_chr14_3453 TPM= 4.25 Transcript Type= NA
chr14	103694252	103699933	103694252	103699933	-	transcript3456.chr14.nnic@NA	transcript3456.chr14.nnic	NA	103694252	103699933	Gene ID= novel_gene_chr14_3457 TPM= 23.37 Transcript Type= NA
chr14	103696353	103697163	103696353	103697163	+	ENST00000602422.1@AL049840.4	ENST00000602422.1	sense_intronic	103696353	103697163	Gene ID= ENSG00000269958.1 TPM= 2.12 Transcript Type= sense_intronic
chr14	103697618	103715469	103697618	103715469	-	ENST00000555055.5@XRCC3	ENST00000555055.5	protein_coding	103715424,103712875,103711466,103711033,103708522,103707003,103703173,103699364,103699133,103697618	103715469,103712931,103711567,103711245,103708659,103707215,103703327,103699576,103699179,103699017	Gene ID= ENSG00000126215.13 TPM= 4.25 Transcript Type= protein_coding
chr14	103699586	103701881	103699586	103701881	+	transcript3446.chr14.nnic@NA	transcript3446.chr14.nnic	NA	103699586	103701881	Gene ID= novel_gene_chr14_3447 TPM= 2.12 Transcript Type= NA
chr14	103715730	103733668	103715730	103733668	+	ENST00000216602.10@ZFYVE21	ENST00000216602.10	protein_coding	103715730,103726792,103727746,103728908,103729091,103729793,103732620,103732983	103715979,103726842,103727914,103728983,103729182,103729846,103732762,103733668	Gene ID= ENSG00000100711.13 TPM= 8.76 Transcript Type= protein_coding
chr14	103715799	103733664	103715799	103733664	+	transcript3430.chr14.nic@ZFYVE21	transcript3430.chr14.nic	protein_coding	103715799,103726792,103727559,103728908,103729091,103732620,103732983	103715979,103726842,103727914,103728983,103729182,103732762,103733664	Gene ID= ENSG00000100711.13 TPM= 7.7 Transcript Type= NA
chr14	103715808	103733662	103715808	103733662	+	ENST00000311141.6@ZFYVE21	ENST00000311141.6	protein_coding	103715808,103726792,103727746,103728908,103729091,103732620,103732983	103715979,103726842,103727914,103728983,103729182,103732762,103733662	Gene ID= ENSG00000100711.13 TPM= 216.95 Transcript Type= protein_coding
chr14	103749650	103847616	103749650	103847616	-	transcript3429.chr14.nic@PPP1R13B	transcript3429.chr14.nic	protein_coding	103847299,103797371,103784795,103778745,103757650,103754070,103753000,103749650	103847616,103797518,103784914,103778821,103757751,103754244,103753196,103749934	Gene ID= ENSG00000088808.16 TPM= 2.12 Transcript Type= NA
chr14	103733753	103737696	103733753	103737696	-	ENST00000555825.5@PPP1R13B	ENST00000555825.5	protein_coding	103736003,103733753	103737696,103735195	Gene ID= ENSG00000088808.16 TPM= 22.31 Transcript Type= retained_intron
chr14	103733752	103847590	103733752	103847590	-	ENST00000202556.13@PPP1R13B	ENST00000202556.13	protein_coding	103847299,103797371,103784795,103778745,103757650,103754070,103753000,103749794,103746373,103742654,103741790,103739824,103738886,103738679,103737694,103736003,103733752	103847590,103797518,103784914,103778821,103757751,103754244,103753196,103749934,103746553,103742823,103742291,103740593,103739023,103738812,103737860,103736202,103735195	Gene ID= ENSG00000088808.16 TPM= 12.75 Transcript Type= protein_coding
chr14	103733963	103737959	103733963	103737959	-	transcript3460.chr14.nnic@NA	transcript3460.chr14.nnic	NA	103733963	103737959	Gene ID= novel_gene_chr14_3461 TPM= 2.12 Transcript Type= NA
chr14	103912288	103921557	103912288	103921557	-	ENST00000286953.7@C14orf2	ENST00000286953.7	protein_coding	103921470,103915066,103913961,103912288	103921557,103915189,103913984,103912694	Gene ID= ENSG00000156411.9 TPM= 95.59 Transcript Type= protein_coding
chr14	103912517	103921538	103912517	103921538	-	ENST00000553449.1@C14orf2	ENST00000553449.1	protein_coding	103921470,103913961,103912517	103921538,103913984,103912694	Gene ID= ENSG00000156411.9 TPM= 13.81 Transcript Type= processed_transcript
chr14	103928462	104052667	103928462	104052667	+	ENST00000409874.8@TDRD9	ENST00000409874.8	protein_coding	103928462,103955664,103963079,103965333,103966709,103970541,103975389,103986217,103991160,103994332,103994519,103995750,103998624,104004238,104005274,104006389,104006646,104006782,104007160,104008413,104014725,104015981,104018092,104022157,104024569,104025564,104026047,104026679,104031108,104032017,104033960,104034960,104040196,104042069,104049608,104051981	103928724,103955770,103963176,103965554,103966831,103970621,103975553,103986320,103991224,103994386,103994603,103995807,103998728,104004335,104005405,104006554,104006709,104006845,104007204,104008466,104014841,104016088,104018192,104022330,104024680,104025776,104026136,104026939,104031263,104032087,104034069,104035056,104040334,104042187,104049680,104052667	Gene ID= ENSG00000156414.18 TPM= 4.25 Transcript Type= protein_coding
chr14	103940410	103942562	103940410	103942562	-	transcript3479.chr14.nnic@RD3L	transcript3479.chr14.nnic	protein_coding	103942092,103940410	103942562,103941103	Gene ID= ENSG00000227729.3 TPM= 2.12 Transcript Type= NA
chr14	104167683	104170539	104167683	104170539	+	transcript3487.chr14.nnic@NA	transcript3487.chr14.nnic	NA	104167683	104170539	Gene ID= novel_gene_chr14_3488 TPM= 2.12 Transcript Type= NA
chr14	104139040	104180894	104139040	104180894	+	ENST00000315264.7@KIF26A	ENST00000315264.7	protein_coding	104139040,104152015,104157755,104166859,104171723,104172575,104172977,104173330,104173706,104174148,104174982,104178550,104179236,104179609	104139288,104152461,104157942,104167048,104171935,104172668,104173239,104173513,104173868,104174310,104177898,104178755,104179386,104180894	Gene ID= ENSG00000066735.14 TPM= 18.06 Transcript Type= protein_coding
chr14	104579684	104590515	104579684	104590515	+	ENST00000557649.5@C14orf180	ENST00000557649.5	protein_coding	104579684,104586415,104587749,104588274,104588578	104580003,104586541,104587878,104588309,104590515	Gene ID= ENSG00000184601.10 TPM= 45.14 Transcript Type= protein_coding
chr14	104581141	104589808	104581141	104589808	+	ENST00000410013.1@C14orf180	ENST00000410013.1	protein_coding	104581141,104586415,104587749,104588274,104588578	104581625,104586541,104587878,104588309,104589808	Gene ID= ENSG00000184601.10 TPM= 5.84 Transcript Type= protein_coding
chr14	104579726	104589847	104579726	104589847	+	transcript3503.chr14.nic@C14orf180	transcript3503.chr14.nic	protein_coding	104579726,104586415,104587749,104588274	104580003,104586541,104587878,104589847	Gene ID= ENSG00000184601.10 TPM= 13.28 Transcript Type= NA
chr14	104581215	104589847	104581215	104589847	+	transcript3504.chr14.nic@C14orf180	transcript3504.chr14.nic	protein_coding	104581215,104586415,104587749,104588274	104581625,104586541,104587878,104589847	Gene ID= ENSG00000184601.10 TPM= 7.97 Transcript Type= NA
chr14	104689621	104704809	104689621	104704809	+	ENST00000398337.8@INF2	ENST00000398337.8	protein_coding	104689621,104701357,104703105,104703295,104703916	104689739,104701756,104703220,104703454,104704809	Gene ID= ENSG00000203485.12 TPM= 6.37 Transcript Type= protein_coding
chr14	104689637	104719603	104689637	104719603	+	ENST00000392634.8@INF2	ENST00000392634.8	protein_coding	104689637,104701357,104703105,104703295,104703916,104706035,104706910,104707253,104708436,104708671,104709281,104709620,104710088,104710937,104711079,104711629,104712433,104712828,104713207,104713445,104714203,104715284,104718795	104689739,104701756,104703220,104703454,104703949,104706176,104707051,104708002,104708587,104708732,104709383,104709705,104710188,104711007,104711186,104711699,104712553,104712992,104713309,104713606,104714856,104715340,104719603	Gene ID= ENSG00000203485.12 TPM= 15.93 Transcript Type= protein_coding
chr14	104689606	104722535	104689606	104722535	+	ENST00000330634.11@INF2	ENST00000330634.11	protein_coding	104689606,104701357,104703105,104703295,104703916,104706035,104706910,104707253,104708436,104708671,104709281,104709620,104710088,104710937,104711079,104711629,104712433,104712828,104713207,104713445,104714203,104718795	104689739,104701756,104703220,104703454,104703949,104706176,104707051,104708002,104708587,104708732,104709383,104709705,104710188,104711007,104711186,104711699,104712553,104712992,104713309,104713606,104714856,104722535	Gene ID= ENSG00000203485.12 TPM= 4.25 Transcript Type= protein_coding
chr14	104707670	104715325	104707670	104715325	+	transcript3510.chr14.nic@INF2	transcript3510.chr14.nic	protein_coding	104707670,104708436,104708671,104709281,104709620,104710088,104710937,104711079,104711629,104712433,104712828,104713207,104713445,104714203	104708002,104708587,104708732,104709383,104709705,104710188,104711007,104711186,104711699,104712553,104712992,104713309,104713606,104715325	Gene ID= ENSG00000203485.12 TPM= 5.31 Transcript Type= NA
chr14	104716821	104719603	104716821	104719603	+	transcript3524.chr14.nnic@NA	transcript3524.chr14.nnic	NA	104716821	104719603	Gene ID= novel_gene_chr14_3525 TPM= 15.93 Transcript Type= NA
chr14	104724186	104747310	104724186	104747310	+	ENST00000330877.6@ADSSL1	ENST00000330877.6	protein_coding	104724186,104735020,104738376,104739328,104739750,104740601,104740839,104741117,104741848,104743067,104744812,104746236,104746951	104724462,104735122,104738438,104739378,104739816,104740708,104740920,104741243,104742002,104743191,104744909,104746385,104747310	Gene ID= ENSG00000185100.10 TPM= 240.05 Transcript Type= protein_coding
chr14	104753122	104759653	104753122	104759653	+	transcript3530.chr14.nnic@SIVA1	transcript3530.chr14.nnic	protein_coding	104753122,104755630,104756604,104759219	104753319,104755824,104756760,104759653	Gene ID= ENSG00000184990.12 TPM= 3.19 Transcript Type= NA
chr14	104753100	104759657	104753100	104759657	+	ENST00000329967.10@SIVA1	ENST00000329967.10	protein_coding	104753100,104755630,104756604,104759428	104753319,104755824,104756760,104759657	Gene ID= ENSG00000184990.12 TPM= 81.26 Transcript Type= protein_coding
chr14	104753159	104759659	104753159	104759659	+	ENST00000347067.9@SIVA1	ENST00000347067.9	protein_coding	104753159,104756604,104759428	104753319,104756760,104759659	Gene ID= ENSG00000184990.12 TPM= 3.72 Transcript Type= protein_coding
chr14	104769349	104795904	104769349	104795904	-	transcript3543.chr14.nic@AKT1	transcript3543.chr14.nic	protein_coding	104795484,104793127,104792598,104780088,104776659,104775652,104775076,104774938,104773912,104773455,104773251,104772878,104772365,104770745,104769349	104795904,104793304,104792722,104780216,104776770,104775799,104775207,104775003,104773980,104773580,104773379,104773092,104772452,104770847,104770420	Gene ID= ENSG00000142208.15 TPM= 113.17 Transcript Type= NA
chr14	104769349	104795679	104769349	104795679	-	ENST00000407796.6@AKT1	ENST00000407796.6	protein_coding	104795484,104792598,104780088,104776659,104775652,104775076,104774938,104773912,104773455,104773251,104772878,104772365,104770745,104769349	104795679,104792722,104780216,104776770,104775799,104775207,104775003,104773980,104773580,104773379,104773092,104772452,104770847,104770420	Gene ID= ENSG00000142208.15 TPM= 231.6 Transcript Type= protein_coding
chr14	104769349	104795751	104769349	104795751	-	ENST00000349310.7@AKT1	ENST00000349310.7	protein_coding	104795484,104793127,104792598,104780088,104776659,104775652,104775076,104774938,104773912,104773455,104773251,104772878,104772365,104770745,104769349	104795751,104793210,104792722,104780216,104776770,104775799,104775207,104775003,104773980,104773580,104773379,104773092,104772452,104770847,104770420	Gene ID= ENSG00000142208.15 TPM= 37.23 Transcript Type= protein_coding
chr14	104800535	104804705	104800535	104804705	+	transcript3585.chr14.nnic@ZBTB42	transcript3585.chr14.nnic	protein_coding	104800535,104801359	104800700,104804705	Gene ID= ENSG00000179627.9 TPM= 2.12 Transcript Type= NA
chr14	104800913	104804712	104800913	104804712	+	ENST00000342537.7@ZBTB42	ENST00000342537.7	protein_coding	104800913	104804712	Gene ID= ENSG00000179627.9 TPM= 9.56 Transcript Type= protein_coding
chr14	104815453	104816004	104815453	104816004	-	transcript3587.chr14.nnic@NA	transcript3587.chr14.nnic	NA	104815453	104816004	Gene ID= novel_gene_chr14_3588 TPM= 7.44 Transcript Type= NA
chr14	104985793	104995512	104985793	104995512	+	ENST00000547315.5@C14orf79	ENST00000547315.5	protein_coding	104985793,104988943,104991491,104992948,104994598	104986854,104989088,104991620,104993064,104995512	Gene ID= ENSG00000140104.13 TPM= 5.31 Transcript Type= protein_coding
chr14	105009573	105021148	105009573	105021148	-	ENST00000336219.3@CDCA4	ENST00000336219.3	protein_coding	105020999,105009573	105021148,105011935	Gene ID= ENSG00000170779.10 TPM= 5.31 Transcript Type= protein_coding
chr14	105093292	105095700	105093292	105095700	+	transcript3598.chr14.nnic@NA	transcript3598.chr14.nnic	NA	105093292	105095700	Gene ID= novel_gene_chr14_3599 TPM= 2.12 Transcript Type= NA
chr14	105141741	105143938	105141741	105143938	-	transcript3606.chr14.nnic@NA	transcript3606.chr14.nnic	NA	105141741	105143938	Gene ID= novel_gene_chr14_3607 TPM= 13.81 Transcript Type= NA
chr14	105172939	105181311	105172939	105181311	-	transcript3611.chr14.nnic@NUDT14	transcript3611.chr14.nnic	protein_coding	105181129,105177692,105176963,105176534,105172939	105181311,105177735,105176994,105176771,105173261	Gene ID= ENSG00000183828.14 TPM= 3.72 Transcript Type= NA
chr14	105172939	105181303	105172939	105181303	-	ENST00000392568.6@NUDT14	ENST00000392568.6	protein_coding	105181129,105177692,105176963,105176534,105172939	105181303,105177735,105177027,105176771,105173261	Gene ID= ENSG00000183828.14 TPM= 23.9 Transcript Type= protein_coding
chr14	105209289	105220282	105209289	105220282	-	transcript3620.chr14.nic@BRF1	transcript3620.chr14.nic	protein_coding	105219151,105218998,105217544,105212113,105211122,105209289	105220282,105219053,105217800,105212164,105211293,105210588	Gene ID= ENSG00000185024.16 TPM= 6.37 Transcript Type= NA
chr14	105256186	105301278	105256186	105301278	-	ENST00000548421.2@BRF1	ENST00000548421.2	protein_coding	105300446,105286296,105272721,105256186	105301278,105286376,105272894,105256549	Gene ID= ENSG00000185024.16 TPM= 2.12 Transcript Type= protein_coding
chr14	105209286	105300688	105209286	105300688	-	ENST00000547530.6@BRF1	ENST00000547530.6	protein_coding	105300446,105286296,105272721,105256518,105252507,105241265,105228820,105226634,105226251,105226069,105221648,105220069,105219151,105218998,105217544,105212113,105211122,105209286	105300688,105286376,105272894,105256549,105252579,105241414,105228913,105226760,105226290,105226161,105221914,105220130,105219232,105219053,105217800,105212164,105211293,105210588	Gene ID= ENSG00000185024.16 TPM= 6.37 Transcript Type= protein_coding
chr14	105248574	105251093	105248574	105251093	+	ENST00000392554.7@BTBD6	ENST00000392554.7	protein_coding	105248574,105249157,105249360,105249640	105249085,105249247,105249478,105251093	Gene ID= ENSG00000184887.13 TPM= 121.8 Transcript Type= protein_coding
chr14	105248626	105251093	105248626	105251093	+	ENST00000463376.6@BTBD6	ENST00000463376.6	protein_coding	105248626,105249360,105249640	105249247,105249478,105251093	Gene ID= ENSG00000184887.13 TPM= 24.08 Transcript Type= protein_coding
chr14	105314415	105395206	105314415	105395206	+	ENST00000325438.12@PACS2	ENST00000325438.12	protein_coding	105314415,105348493,105352378,105355052,105367213,105368074,105368459,105369841,105376768,105379739,105380080,105380957,105381914,105382477,105382807,105383359,105384353,105384879,105389961,105391207,105391631,105392619,105393222,105394554	105315037,105348580,105352467,105355177,105367375,105368147,105368539,105369900,105376925,105379829,105380154,105381099,105382046,105382581,105382913,105383513,105384463,105384987,105390003,105391249,105391766,105392845,105393335,105395206	Gene ID= ENSG00000179364.13 TPM= 61.07 Transcript Type= protein_coding
chr14	105314671	105395206	105314671	105395206	+	transcript3638.chr14.nic@PACS2	transcript3638.chr14.nic	protein_coding	105314671,105348493,105352378,105355052,105367213,105368074,105368459,105369841,105376768,105379739,105380080,105380957,105381914,105382477,105382807,105383359,105384353,105384879,105389961,105391207,105391631,105392761,105393222,105394554	105315037,105348580,105352467,105355177,105367375,105368147,105368539,105369900,105376925,105379829,105380154,105381099,105382046,105382581,105382913,105383513,105384463,105384987,105390003,105391249,105391766,105392845,105393335,105395206	Gene ID= ENSG00000179364.13 TPM= 13.28 Transcript Type= NA
chr14	105417524	105420058	105417524	105420058	-	transcript3717.chr14.nnic@AL928654.2	transcript3717.chr14.nnic	antisense_RNA	105419564,105418939,105418682,105417524	105420058,105419080,105418816,105418309	Gene ID= ENSG00000251602.6 TPM= 2.12 Transcript Type= NA
chr14	105419822	105470729	105419822	105470729	+	ENST00000331320.11@MTA1	ENST00000331320.11	protein_coding	105419822,105438672,105445418,105449359,105450058,105450261,105454193,105458270,105460358,105460765,105463184,105463493,105464032,105464416,105464674,105465094,105466426,105466707,105469467,105469841,105470065	105420063,105438739,105445511,105449409,105450184,105450324,105454310,105458372,105460457,105460953,105463258,105463551,105464147,105464567,105464863,105465183,105466578,105466742,105469498,105469992,105470729	Gene ID= ENSG00000182979.17 TPM= 39.57 Transcript Type= protein_coding
chr14	105419938	105470729	105419938	105470729	+	ENST00000405646.5@MTA1	ENST00000405646.5	protein_coding	105419938,105438672,105445418,105450058,105450261,105454193,105458270,105460358,105460765,105463184,105463493,105464032,105464416,105464674,105465094,105466426,105466707,105469467,105469841,105470065	105420063,105438739,105445511,105450184,105450324,105454310,105458372,105460457,105460953,105463258,105463551,105464147,105464567,105464863,105465183,105466578,105466742,105469498,105469992,105470729	Gene ID= ENSG00000182979.17 TPM= 28.94 Transcript Type= protein_coding
chr14	105474150	105480170	105474150	105480170	+	ENST00000329146.8@CRIP2	ENST00000329146.8	protein_coding	105474150,105478266,105478450,105478731,105478979,105479125,105479436,105479586	105474905,105478360,105478507,105478871,105479047,105479219,105479493,105480170	Gene ID= ENSG00000182809.10 TPM= 2286.33 Transcript Type= protein_coding
chr14	105474832	105480152	105474832	105480152	+	ENST00000547643.5@CRIP2	ENST00000547643.5	protein_coding	105474832,105478266,105478450,105478731,105478979,105479125,105479586	105474905,105478360,105478507,105478871,105479047,105479493,105480152	Gene ID= ENSG00000182809.10 TPM= 52.76 Transcript Type= retained_intron
chr14	105486123	105488789	105486123	105488789	+	transcript3732.chr14.nnic@AL928654.4	transcript3732.chr14.nnic	protein_coding	105486123,105487213,105488166,105488331,105488471,105488663	105486663,105487299,105488260,105488388,105488516,105488789	Gene ID= ENSG00000257341.5 TPM= 19.65 Transcript Type= NA
chr14	105486317	105488791	105486317	105488791	+	ENST00000330233.11@CRIP1	ENST00000330233.11	protein_coding	105486317,105488166,105488331,105488471,105488663	105487299,105488260,105488388,105488516,105488791	Gene ID= ENSG00000213145.9 TPM= 19.65 Transcript Type= protein_coding
chr14	105491268	105499209	105491268	105499209	+	ENST00000354560.10@C14orf80	ENST00000354560.10	protein_coding	105491268,105491622,105492107,105492579,105497357,105497798,105498617	105491522,105491700,105492309,105492734,105497443,105497977,105499209	Gene ID= ENSG00000185347.17 TPM= 1.06 Transcript Type= protein_coding
chr14	105526603	105530202	105526603	105530202	+	ENST00000392519.6@TMEM121	ENST00000392519.6	protein_coding	105526603,105528722	105526653,105530202	Gene ID= ENSG00000184986.10 TPM= 7.44 Transcript Type= protein_coding
chr14	105586889	105588395	105586889	105588395	-	ENST00000390539.2@IGHA2	ENST00000390539.2	IG_C_gene	105588089,105587554,105586889	105588395,105587874,105587331	Gene ID= ENSG00000211890.4 TPM= 2.12 Transcript Type= IG_C_gene
chr14	105643068	105644790	105643068	105644790	-	ENST00000390545.3@IGHG2	ENST00000390545.3	IG_C_gene	105644496,105644068,105643623,105643068	105644790,105644103,105643949,105643525	Gene ID= ENSG00000211893.4 TPM= 3.19 Transcript Type= IG_C_gene
chr14	105707118	105708665	105707118	105708665	-	ENST00000390547.3@IGHA1	ENST00000390547.3	IG_C_gene	105708359,105707785,105707118	105708665,105708144,105707562	Gene ID= ENSG00000211895.5 TPM= 3.19 Transcript Type= IG_C_gene
chr15	20425367	20429434	20425367	20429434	+	transcript3.chr15.nnic@NA	transcript3.chr15.nnic	NA	20425367	20429434	Gene ID= novel_gene_chr15_4 TPM= 2.12 Transcript Type= NA
chr15	22587738	22590815	22587738	22590815	+	transcript26.chr15.nnic@NA	transcript26.chr15.nnic	NA	22587738	22590815	Gene ID= novel_gene_chr15_27 TPM= 2.12 Transcript Type= NA
chr15	22765650	22766848	22765650	22766848	+	transcript37.chr15.nnic@NA	transcript37.chr15.nnic	NA	22765650	22766848	Gene ID= novel_gene_chr15_38 TPM= 2.12 Transcript Type= NA
chr15	22786650	22825467	22786650	22825467	+	transcript40.chr15.nnic@NIPA1	transcript40.chr15.nnic	protein_coding	22786650,22810749,22812163,22813633,22814083,22820313,22823728	22786834,22810796,22812253,22813714,22814153,22820473,22825467	Gene ID= ENSG00000170113.15 TPM= 3.19 Transcript Type= NA
chr15	22786632	22829791	22786632	22829791	+	ENST00000337435.8@NIPA1	ENST00000337435.8	protein_coding	22786632,22810749,22812163,22820313,22823728	22786834,22810796,22812253,22820473,22829791	Gene ID= ENSG00000170113.15 TPM= 3.19 Transcript Type= protein_coding
chr15	22838673	22866916	22838673	22866916	+	transcript52.chr15.nic@NIPA2	transcript52.chr15.nic	protein_coding	22838673,22839655,22845146,22851639,22853212,22858540,22860629,22866213	22839174,22839790,22845267,22851870,22853268,22858630,22860789,22866916	Gene ID= ENSG00000140157.14 TPM= 2.12 Transcript Type= NA
chr15	22838660	22868384	22838660	22868384	+	ENST00000337451.7@NIPA2	ENST00000337451.7	protein_coding	22838660,22839655,22845146,22851639,22853212,22858540,22860629,22866213	22838921,22839790,22845267,22851870,22853268,22858630,22860789,22868384	Gene ID= ENSG00000140157.14 TPM= 2.12 Transcript Type= protein_coding
chr15	22838641	22868384	22838641	22868384	+	ENST00000398014.6@NIPA2	ENST00000398014.6	protein_coding	22838641,22839655,22851639,22853212,22858540,22860629,22866213	22838921,22839790,22851870,22853268,22858630,22860789,22868384	Gene ID= ENSG00000140157.14 TPM= 2.12 Transcript Type= protein_coding
chr15	22838670	22867716	22838670	22867716	+	transcript61.chr15.nic@NIPA2	transcript61.chr15.nic	protein_coding	22838670,22845146,22851639,22853212,22858540,22860629,22866213	22838921,22845267,22851870,22853268,22858630,22860789,22867716	Gene ID= ENSG00000140157.14 TPM= 2.39 Transcript Type= NA
chr15	22838839	22867716	22838839	22867716	+	transcript68.chr15.nnic@NIPA2	transcript68.chr15.nnic	protein_coding	22838839,22845146,22851639,22853212,22858540,22860629,22866213	22839174,22845267,22851870,22853268,22858630,22860789,22867716	Gene ID= ENSG00000140157.14 TPM= 2.39 Transcript Type= NA
chr15	22838687	22867716	22838687	22867716	+	ENST00000398013.7@NIPA2	ENST00000398013.7	protein_coding	22838687,22851639,22853212,22858540,22860629,22866213	22838921,22851870,22853268,22858630,22860789,22867716	Gene ID= ENSG00000140157.14 TPM= 3.45 Transcript Type= protein_coding
chr15	22838725	22867716	22838725	22867716	+	transcript74.chr15.nic@NIPA2	transcript74.chr15.nic	protein_coding	22838725,22851639,22853212,22858540,22860629,22866213	22839174,22851870,22853268,22858630,22860789,22867716	Gene ID= ENSG00000140157.14 TPM= 2.39 Transcript Type= NA
chr15	22869466	22980349	22869466	22980349	-	transcript78.chr15.nnic@CYFIP1	transcript78.chr15.nnic	protein_coding	22980287,22947169,22944862,22944558,22943173,22939411,22939192,22937104,22933802,22932223,22927906,22925982,22918692,22917788,22916477,22914726,22912179,22910737,22910520,22909194,22903706,22892890,22882868,22881846,22879913,22875199,22874550,22873491,22872825,22869466	22980349,22947291,22944939,22944659,22943354,22939507,22939320,22937208,22933893,22932340,22928028,22926107,22918858,22917935,22916630,22914882,22912275,22910813,22910628,22909313,22903905,22892977,22883011,22881936,22880043,22875271,22874644,22873729,22872972,22870192	Gene ID= ENSG00000273749.4 TPM= 20.18 Transcript Type= NA
chr15	22924572	22929653	22924572	22929653	-	transcript80.chr15.nnic@CYFIP1	transcript80.chr15.nnic	protein_coding	22927906,22925982,22924572	22929653,22926107,22925578	Gene ID= ENSG00000273749.4 TPM= 3.19 Transcript Type= NA
chr15	22999176	23039673	22999176	23039673	-	ENST00000615383.4@TUBGCP5	ENST00000615383.4	protein_coding	23039398,23037099,23036897,23032728,23031950,23030885,23027192,23026116,23024737,23023947,23021959,23019219,23017773,23011133,23009945,23008699,23006268,23006052,23005432,23004102,23003065,23000569,22999176	23039673,23037152,23037005,23032824,23032029,23031020,23027306,23026205,23024830,23024193,23022161,23019334,23018041,23011331,23010133,23008881,23006352,23006172,23005610,23004227,23003153,23000669,22999866	Gene ID= ENSG00000275835.4 TPM= 6.37 Transcript Type= protein_coding
chr15	23303714	23314566	23303714	23314566	+	transcript88.chr15.nnic@AC242376.2	transcript88.chr15.nnic	unprocessed_pseudogene	23303714,23304428,23309140,23309607,23310152,23310803,23311338,23311605,23313105	23303818,23304530,23309457,23309735,23310297,23310974,23311512,23311729,23314566	Gene ID= ENSG00000274471.1 TPM= 2.12 Transcript Type= NA
chr15	23303714	23310759	23303714	23310759	+	transcript98.chr15.nnic@AC242376.2	transcript98.chr15.nnic	unprocessed_pseudogene	23303714,23304428,23309140,23309607	23303818,23304530,23309457,23310759	Gene ID= ENSG00000274471.1 TPM= 2.12 Transcript Type= NA
chr15	23361170	23372044	23361170	23372044	-	transcript99.chr15.nnic@NA	transcript99.chr15.nnic	NA	23371977,23367677,23364981,23364264,23361170	23372044,23367734,23365113,23364360,23362195	Gene ID= novel_gene_chr15_100 TPM= 2.12 Transcript Type= NA
chr15	23685400	23687330	23685400	23687330	-	ENST00000331837.5@NDN	ENST00000331837.5	protein_coding	23685400	23687330	Gene ID= ENSG00000182636.5 TPM= 3.19 Transcript Type= protein_coding
chr15	24954927	24978723	24954927	24978723	+	ENST00000390687.8@SNRPN	ENST00000390687.8	protein_coding	24954927,24962114,24967932,24974311,24975358,24976305,24976877,24977778,24978193,24978407	24955062,24962209,24968082,24974456,24975509,24976416,24977029,24977916,24978318,24978723	Gene ID= ENSG00000128739.21 TPM= 11.68 Transcript Type= protein_coding
chr15	24823647	24978582	24823647	24978582	+	ENST00000400100.5@SNRPN	ENST00000400100.5	protein_coding	24823647,24829798,24886516,24920011,24962114,24967932,24974311,24975358,24976305,24976877,24977778,24978193,24978407	24823850,24829905,24886589,24920124,24962209,24968082,24974456,24975509,24976416,24977029,24977916,24978318,24978582	Gene ID= ENSG00000128739.21 TPM= 3.57 Transcript Type= protein_coding
chr15	24856551	24978582	24856551	24978582	+	ENST00000400097.5@SNRPN	ENST00000400097.5	protein_coding	24856551,24886516,24920011,24962114,24967932,24974311,24975358,24976305,24976877,24977778,24978193,24978407	24856716,24886589,24920124,24962209,24968082,24974456,24975509,24976416,24977029,24977916,24978318,24978582	Gene ID= ENSG00000128739.21 TPM= 22.69 Transcript Type= protein_coding
chr15	24955005	24978548	24955005	24978548	+	ENST00000577565.1@SNRPN	ENST00000577565.1	protein_coding	24955005,24962114,24967932,24974288,24975358,24976305,24976877,24977778,24978193,24978407	24955062,24962209,24968082,24974456,24975509,24976416,24977029,24977916,24978318,24978548	Gene ID= ENSG00000128739.21 TPM= 370.69 Transcript Type= protein_coding
chr15	24954935	24978583	24954935	24978583	+	ENST00000346403.10@SNRPN	ENST00000346403.10	protein_coding	24954935,24962114,24967932,24974387,24975358,24976305,24976877,24977778,24978193,24978407	24955062,24962209,24968082,24974456,24975509,24976416,24977029,24977916,24978318,24978583	Gene ID= ENSG00000128739.21 TPM= 11.77 Transcript Type= protein_coding
chr15	24955014	24968829	24955014	24968829	+	ENST00000338327.4@SNURF	ENST00000338327.4	protein_coding	24955014,24962114,24967932,24968795	24955062,24962209,24968082,24968829	Gene ID= ENSG00000273173.5 TPM= 10.62 Transcript Type= protein_coding
chr15	24996187	25002404	24996187	25002404	+	transcript169.chr15.nic@SNHG14	transcript169.chr15.nic	processed_transcript	24996187,24998970,25000245,25001358	24998486,24999078,25000374,25002404	Gene ID= ENSG00000224078.13 TPM= 3.19 Transcript Type= NA
chr15	24981994	24983413	24981994	24983413	+	transcript181.chr15.nnic@NA	transcript181.chr15.nnic	NA	24981994	24983413	Gene ID= novel_gene_chr15_182 TPM= 4.25 Transcript Type= NA
chr15	24985690	24991067	24985690	24991067	-	transcript183.chr15.nnic@NA	transcript183.chr15.nnic	NA	24985690	24991067	Gene ID= novel_gene_chr15_184 TPM= 6.37 Transcript Type= NA
chr15	24992150	24997288	24992150	24997288	+	transcript179.chr15.nnic@NA	transcript179.chr15.nnic	NA	24992150	24997288	Gene ID= novel_gene_chr15_180 TPM= 7.44 Transcript Type= NA
chr15	25031576	25032243	25031576	25032243	-	transcript185.chr15.nnic@NA	transcript185.chr15.nnic	NA	25031576	25032243	Gene ID= novel_gene_chr15_186 TPM= 2.12 Transcript Type= NA
chr15	25096331	25112187	25096331	25112187	+	transcript196.chr15.nic@SNHG14	transcript196.chr15.nic	processed_transcript	25096331,25098717,25099145,25103859,25106164,25107472,25107910,25108998,25109198,25109555,25111765	25097439,25098828,25099278,25103970,25106294,25107588,25108038,25109103,25109403,25109715,25112187	Gene ID= ENSG00000224078.13 TPM= 2.47 Transcript Type= NA
chr15	25096331	25103203	25096331	25103203	+	transcript197.chr15.nnic@SNHG14	transcript197.chr15.nnic	processed_transcript	25096331,25098717,25099145,25100779	25097439,25098828,25099278,25103203	Gene ID= ENSG00000224078.13 TPM= 3.54 Transcript Type= NA
chr15	25096331	25101948	25096331	25101948	+	transcript200.chr15.nic@SNHG14	transcript200.chr15.nic	processed_transcript	25096331,25098717,25099145	25097439,25098828,25101948	Gene ID= ENSG00000224078.13 TPM= 8.85 Transcript Type= NA
chr15	25339106	25439094	25339106	25439094	-	transcript207.chr15.nic@UBE3A	transcript207.chr15.nic	protein_coding	25438489,25411908,25409088,25408620,25407067,25405461,25375465,25370566,25360383,25356691,25355892,25354528,25354353,25340085,25339106	25439094,25411971,25409207,25408684,25407262,25405502,25375763,25371812,25360527,25356896,25356056,25354683,25354426,25340228,25339257	Gene ID= ENSG00000114062.18 TPM= 8.15 Transcript Type= NA
chr15	25354033	25439051	25354033	25439051	-	ENST00000625778.2@UBE3A	ENST00000625778.2	protein_coding	25438489,25405461,25375465,25370566,25360383,25356691,25355892,25354528,25354033	25439051,25405502,25375763,25371812,25360527,25356896,25356056,25354683,25354426	Gene ID= ENSG00000114062.18 TPM= 1.06 Transcript Type= protein_coding
chr15	25337485	25339057	25337485	25339057	-	transcript234.chr15.nnic@NA	transcript234.chr15.nnic	NA	25337485	25339057	Gene ID= novel_gene_chr15_235 TPM= 6.37 Transcript Type= NA
chr15	25399742	25402668	25399742	25402668	-	transcript238.chr15.nnic@NA	transcript238.chr15.nnic	NA	25399742	25402668	Gene ID= novel_gene_chr15_239 TPM= 2.12 Transcript Type= NA
chr15	26261699	26265919	26261699	26265919	+	transcript240.chr15.nnic@NA	transcript240.chr15.nnic	NA	26261699,26264764	26261975,26265919	Gene ID= novel_gene_chr15_241 TPM= 4.25 Transcript Type= NA
chr15	28111040	28322152	28111040	28322152	-	ENST00000261609.11@HERC2	ENST00000261609.11	protein_coding	28322075,28321362,28299402,28292888,28280068,28274905,28274291,28272894,28272215,28270695,28269248,28268465,28265817,28265618,28262918,28260777,28257061,28256089,28255872,28254340,28248552,28246742,28245881,28238602,28238114,28236963,28234070,28233664,28233434,28233146,28230367,28229674,28229460,28229195,28228218,28222028,28220452,28218489,28215621,28214655,28214076,28213742,28212445,28211002,28206240,28202347,28202113,28201456,28198601,28198378,28196461,28196215,28191961,28191139,28190965,28186577,28182401,28179142,28178887,28177419,28176950,28176687,28176428,28175512,28174395,28169484,28168407,28167687,28163094,28152677,28146237,28144673,28144077,28143873,28142827,28142238,28141731,28141432,28135478,28132653,28132100,28130503,28130163,28125006,28124037,28121346,28117013,28116665,28115429,28114612,28113573,28113071,28111040	28322152,28321464,28299516,28293022,28280287,28275005,28274447,28273004,28272386,28270868,28269436,28268616,28265974,28265731,28263169,28260970,28257261,28256317,28255996,28254518,28248736,28246897,28246066,28238772,28238217,28237113,28234284,28233796,28233561,28233341,28230500,28229847,28229596,28229346,28228409,28222215,28220644,28218671,28215802,28214802,28214272,28213972,28212583,28211145,28206382,28202614,28202249,28201554,28198769,28198503,28196569,28196354,28192151,28191244,28191056,28186752,28182512,28179223,28179030,28177509,28177127,28176768,28176599,28175656,28174620,28169655,28168590,28167827,28163285,28152830,28146344,28144804,28144235,28143991,28142952,28142393,28141846,28141630,28135692,28132830,28132261,28130594,28130302,28125193,28124234,28121429,28117154,28116859,28115541,28114802,28113678,28113283,28112035	Gene ID= ENSG00000128731.15 TPM= 32.93 Transcript Type= protein_coding
chr15	28254488	28322317	28254488	28322317	-	transcript245.chr15.nic@HERC2	transcript245.chr15.nic	protein_coding	28322075,28321362,28299402,28292888,28280068,28274905,28274291,28272894,28272215,28270695,28269248,28268465,28265817,28265618,28262918,28260777,28257061,28256089,28255872,28254488	28322317,28321464,28299516,28293022,28280287,28275005,28274447,28273004,28272386,28270868,28269436,28268616,28265974,28265731,28263169,28260970,28257261,28256317,28255996,28254518	Gene ID= ENSG00000128731.15 TPM= 8.5 Transcript Type= NA
chr15	28279821	28322179	28279821	28322179	-	transcript251.chr15.nic@HERC2	transcript251.chr15.nic	protein_coding	28322075,28321362,28299402,28292888,28279821	28322179,28321464,28299516,28293022,28280287	Gene ID= ENSG00000128731.15 TPM= 7.44 Transcript Type= NA
chr15	28671043	28683601	28671043	28683601	+	transcript259.chr15.nnic@HERC2P9	transcript259.chr15.nnic	transcribed_unprocessed_pseudogene	28671043,28671731,28673886,28681796	28671633,28671856,28674027,28683601	Gene ID= ENSG00000206149.10 TPM= 10.62 Transcript Type= NA
chr15	28671043	28682654	28671043	28682654	+	transcript263.chr15.nic@HERC2P9	transcript263.chr15.nic	transcribed_unprocessed_pseudogene	28671043,28671731,28681796	28671633,28674027,28682654	Gene ID= ENSG00000206149.10 TPM= 5.31 Transcript Type= NA
chr15	28654442	28685264	28654442	28685264	+	ENST00000528584.5@HERC2P9	ENST00000528584.5	transcribed_unprocessed_pseudogene	28654442,28655273,28655796,28657187,28658623,28663378,28667196,28667561,28668257,28671460,28671731,28673888,28681796,28684129	28654455,28655420,28656026,28657325,28658766,28663520,28667463,28667697,28668355,28671633,28671856,28674027,28681843,28685264	Gene ID= ENSG00000206149.10 TPM= 4.25 Transcript Type= processed_transcript
chr15	28832321	28859007	28832321	28859007	+	ENST00000566178.5@PDCD6IPP2	ENST00000566178.5	transcribed_unprocessed_pseudogene	28832321,28833276,28838688,28846739,28856133	28832460,28833378,28838822,28846836,28859007	Gene ID= ENSG00000261377.5 TPM= 4.25 Transcript Type= processed_transcript
chr15	29268153	29269842	29268153	29269842	-	transcript275.chr15.nnic@NA	transcript275.chr15.nnic	NA	29268153	29269842	Gene ID= novel_gene_chr15_276 TPM= 16.99 Transcript Type= NA
chr15	29772074	29822988	29772074	29822988	-	transcript281.chr15.nic@TJP1	transcript281.chr15.nic	protein_coding	29822002,29800646,29773233,29772074	29822988,29800702,29773357,29772166	Gene ID= ENSG00000104067.16 TPM= 35.05 Transcript Type= NA
chr15	29699367	29822503	29699367	29822503	-	ENST00000346128.10@TJP1	ENST00000346128.10	protein_coding	29822002,29800646,29773233,29772064,29766266,29762335,29761601,29761139,29742642,29741331,29737264,29734274,29733094,29732631,29732433,29727937,29726781,29726379,29720358,29719777,29718266,29718021,29716611,29710831,29708559,29705528,29704222,29699367	29822503,29800702,29773357,29772166,29766542,29762438,29761769,29761286,29742781,29741436,29737414,29734382,29733313,29732815,29732528,29728019,29726991,29726479,29720708,29720016,29719138,29718118,29716838,29711000,29709036,29705745,29704305,29701689	Gene ID= ENSG00000104067.16 TPM= 35.05 Transcript Type= protein_coding
chr15	29700160	29822503	29700160	29822503	-	ENST00000614355.4@TJP1	ENST00000614355.4	protein_coding	29822002,29800646,29773233,29772064,29766266,29762335,29761601,29761139,29742642,29741331,29737264,29734274,29733094,29732631,29732433,29727937,29726781,29726379,29720358,29718266,29718021,29716611,29710831,29708559,29705528,29704162,29700160	29822503,29800702,29773357,29772166,29766542,29762438,29761769,29761286,29742781,29741436,29737414,29734382,29733313,29732815,29732528,29728019,29726991,29726479,29720708,29719138,29718118,29716838,29711000,29709036,29705745,29704305,29701689	Gene ID= ENSG00000104067.16 TPM= 39.3 Transcript Type= protein_coding
chr15	29735900	29738891	29735900	29738891	+	transcript284.chr15.nnic@NA	transcript284.chr15.nnic	NA	29735900	29738891	Gene ID= novel_gene_chr15_285 TPM= 5.31 Transcript Type= NA
chr15	29820161	29822483	29820161	29822483	-	transcript288.chr15.nnic@NA	transcript288.chr15.nnic	NA	29820161	29822483	Gene ID= novel_gene_chr15_289 TPM= 6.37 Transcript Type= NA
chr15	29822225	29823934	29822225	29823934	+	transcript286.chr15.nnic@NA	transcript286.chr15.nnic	NA	29822225	29823934	Gene ID= novel_gene_chr15_287 TPM= 2.12 Transcript Type= NA
chr15	30903865	30943108	30903865	30943108	+	transcript304.chr15.nnic@FAN1	transcript304.chr15.nnic	protein_coding	30903865,30904512,30908118,30910614,30913858,30918164,30920545,30922235,30925127,30925789,30928553,30929203,30930543,30937119,30941566	30903894,30905897,30908258,30910815,30914091,30918295,30920653,30922354,30925291,30925939,30928656,30929397,30930671,30937259,30943108	Gene ID= ENSG00000198690.9 TPM= 6.9 Transcript Type= NA
chr15	30903873	30943108	30903873	30943108	+	ENST00000362065.8@FAN1	ENST00000362065.8	protein_coding	30903873,30904512,30908118,30910614,30913858,30918164,30920545,30922235,30925127,30925789,30928553,30929203,30930543,30937119,30941566	30904011,30905897,30908258,30910815,30914091,30918295,30920653,30922354,30925291,30925939,30928656,30929397,30930671,30937259,30943108	Gene ID= ENSG00000198690.9 TPM= 11.15 Transcript Type= protein_coding
chr15	30903852	30911788	30903852	30911788	+	ENST00000561594.5@FAN1	ENST00000561594.5	protein_coding	30903852,30904512,30908118,30910614	30903887,30905897,30908258,30911788	Gene ID= ENSG00000198690.9 TPM= 1.06 Transcript Type= protein_coding
chr15	30903892	30911643	30903892	30911643	+	ENST00000561607.5@FAN1	ENST00000561607.5	protein_coding	30903892,30904512,30908118,30910614	30904024,30905897,30908258,30911643	Gene ID= ENSG00000198690.9 TPM= 7.44 Transcript Type= protein_coding
chr15	30926514	30928407	30926514	30928407	+	ENST00000602886.1@AC087481.3	ENST00000602886.1	sense_intronic	30926514	30928407	Gene ID= ENSG00000270015.1 TPM= 4.25 Transcript Type= sense_intronic
chr15	31324676	31326455	31324676	31326455	-	transcript326.chr15.nnic@NA	transcript326.chr15.nnic	NA	31324676	31326455	Gene ID= novel_gene_chr15_327 TPM= 3.19 Transcript Type= NA
chr15	31482951	31870694	31482951	31870694	-	transcript330.chr15.nnic@OTUD7A	transcript330.chr15.nnic	protein_coding	31870507,31689359,31656983,31655096,31570018,31558969,31530707,31527181,31526349,31503691,31501690,31487452,31487194,31482951	31870694,31689481,31657077,31655250,31570197,31559187,31530808,31527308,31526461,31503818,31501839,31487566,31487278,31484724	Gene ID= ENSG00000169918.9 TPM= 3.19 Transcript Type= NA
chr15	32517400	32536655	32517400	32536655	-	transcript337.chr15.nnic@AC135983.2	transcript337.chr15.nnic	transcribed_processed_pseudogene	32536298,32533212,32529783,32528532,32526813,32524471,32523029,32522448,32517400	32536655,32533368,32529938,32528701,32526978,32524600,32523213,32522567,32518445	Gene ID= ENSG00000223509.8 TPM= 2.12 Transcript Type= NA
chr15	32536427	32580625	32536427	32580625	+	transcript340.chr15.nnic@LINC02256	transcript340.chr15.nnic	lincRNA	32536427,32575571,32575917,32579708	32537006,32575668,32576000,32580625	Gene ID= ENSG00000261064.1 TPM= 9.03 Transcript Type= NA
chr15	32536721	32580625	32536721	32580625	+	transcript345.chr15.nnic@LINC02256	transcript345.chr15.nnic	lincRNA	32536721,32575917,32579708	32537006,32576000,32580625	Gene ID= ENSG00000261064.1 TPM= 11.68 Transcript Type= NA
chr15	33866227	34039176	33866227	34039176	-	ENST00000306730.7@AVEN	ENST00000306730.7	protein_coding	34038780,34003032,33875925,33870935,33867495,33866227	34039176,34003209,33875995,33871030,33867855,33866728	Gene ID= ENSG00000169857.7 TPM= 36.11 Transcript Type= protein_coding
chr15	34084017	34101948	34084017	34101948	-	ENST00000256545.8@EMC7	ENST00000256545.8	protein_coding	34101604,34095895,34090317,34088053,34084017	34101948,34096014,34090455,34088133,34084486	Gene ID= ENSG00000134153.9 TPM= 122.15 Transcript Type= protein_coding
chr15	34102053	34104269	34102053	34104269	+	transcript355.chr15.nnic@NA	transcript355.chr15.nnic	NA	34102053	34104269	Gene ID= novel_gene_chr15_356 TPM= 2.12 Transcript Type= NA
chr15	34140674	34210079	34140674	34210079	-	ENST00000256544.7@KATNBL1	ENST00000256544.7	protein_coding	34209951,34163560,34154644,34152790,34148632,34147380,34147200,34146761,34145398,34140674	34210079,34163690,34154684,34153069,34148750,34147430,34147289,34146850,34145491,34142371	Gene ID= ENSG00000134152.10 TPM= 3.19 Transcript Type= protein_coding
chr15	34225013	34230147	34225013	34230147	+	ENST00000249209.8@EMC4	ENST00000249209.8	protein_coding	34225013,34225536,34227693,34229753	34225200,34225650,34227846,34230147	Gene ID= ENSG00000128463.12 TPM= 7.44 Transcript Type= protein_coding
chr15	34229996	34318779	34229996	34318779	-	ENST00000290209.9@SLC12A6	ENST00000290209.9	protein_coding	34318561,34275345,34260926,34258813,34257642,34256229,34255262,34254348,34252170,34250899,34250631,34250298,34245693,34245285,34243974,34242102,34241233,34240661,34238965,34238232,34237419,34236708,34236015,34235181,34229996	34318779,34275389,34261020,34258944,34257788,34256283,34255392,34254589,34252384,34251057,34250729,34250355,34245867,34245403,34244072,34242221,34241337,34240829,34239160,34238401,34237550,34236815,34236199,34235314,34233972	Gene ID= ENSG00000140199.11 TPM= 4.25 Transcript Type= protein_coding
chr15	34321291	34323948	34321291	34323948	+	transcript370.chr15.nnic@NA	transcript370.chr15.nnic	NA	34321291	34323948	Gene ID= novel_gene_chr15_371 TPM= 2.12 Transcript Type= NA
chr15	34341713	34343177	34341713	34343177	-	ENST00000328848.5@NOP10	ENST00000328848.5	protein_coding	34343020,34341713	34343177,34342108	Gene ID= ENSG00000182117.5 TPM= 116.84 Transcript Type= protein_coding
chr15	34358618	34367278	34358618	34367278	-	ENST00000314891.10@LPCAT4	ENST00000314891.10	protein_coding	34366987,34365559,34365008,34364194,34364013,34363661,34363422,34362782,34362573,34362196,34361400,34360111,34359589,34358618	34367278,34365701,34365228,34364306,34364073,34363719,34363456,34362836,34362655,34362321,34361532,34360209,34359745,34359302	Gene ID= ENSG00000176454.13 TPM= 8.5 Transcript Type= protein_coding
chr15	34387595	34437818	34387595	34437818	-	transcript390.chr15.nnic@GOLGA8A	transcript390.chr15.nnic	protein_coding	34437640,34437398,34435383,34407524,34406674,34404917,34400712,34399155,34398634,34391123,34389644,34387595	34437818,34437435,34435471,34407735,34406870,34405055,34400759,34399203,34398729,34391426,34389768,34387952	Gene ID= ENSG00000175265.17 TPM= 2.12 Transcript Type= NA
chr15	34537193	34582888	34537193	34582888	-	transcript394.chr15.nic@GOLGA8B	transcript394.chr15.nic	protein_coding	34582750,34553745,34552895,34551138,34546935,34545378,34544858,34537193	34582888,34553956,34553091,34551276,34546982,34545426,34544953,34537647	Gene ID= ENSG00000215252.11 TPM= 2.12 Transcript Type= NA
chr15	34525654	34582860	34525654	34582860	-	ENST00000484716.5@GOLGA8B	ENST00000484716.5	protein_coding	34582750,34553745,34552895,34551138,34546935,34545378,34544858,34537344,34535865,34532846,34531961,34531648,34531475,34531269,34530182,34529967,34529662,34529018,34528607,34528372,34528189,34527922,34525654	34582860,34553956,34553091,34551276,34546982,34545426,34544953,34537647,34535989,34534173,34531999,34531695,34531559,34531378,34530268,34530074,34529749,34529274,34528750,34528472,34528289,34528077,34527834	Gene ID= ENSG00000215252.11 TPM= 7.44 Transcript Type= retained_intron
chr15	34565681	34569552	34565681	34569552	-	transcript403.chr15.nnic@NA	transcript403.chr15.nnic	NA	34565681	34569552	Gene ID= novel_gene_chr15_404 TPM= 2.12 Transcript Type= NA
chr15	34788096	34796139	34788096	34796139	-	ENST00000290378.4@ACTC1	ENST00000290378.4	protein_coding	34795506,34794680,34793245,34792408,34792090,34791114,34788096	34796139,34794830,34793569,34792569,34792281,34791295,34790555	Gene ID= ENSG00000159251.6 TPM= 54.48 Transcript Type= protein_coding
chr15	34791037	34795366	34791037	34795366	+	transcript450.chr15.nnic@NA	transcript450.chr15.nnic	NA	34791037	34795366	Gene ID= novel_gene_chr15_451 TPM= 140.21 Transcript Type= NA
chr15	34851782	34969839	34851782	34969839	-	ENST00000156471.9@AQR	ENST00000156471.9	protein_coding	34969539,34964234,34960774,34952885,34948264,34944288,34942012,34940899,34938737,34934571,34932318,34930258,34927035,34920332,34918258,34915038,34910135,34906545,34904336,34900622,34897559,34896897,34893663,34890215,34886526,34884525,34882502,34875935,34874677,34873828,34870752,34867524,34862867,34860042,34851782	34969839,34964290,34960814,34952920,34948384,34944428,34942080,34940999,34938813,34934635,34932434,34930371,34927138,34920434,34918378,34915179,34910313,34906712,34904505,34900863,34897705,34896966,34893773,34890324,34886661,34884734,34882639,34876006,34874864,34873999,34870922,34867609,34863041,34860155,34857106	Gene ID= ENSG00000021776.10 TPM= 1.06 Transcript Type= protein_coding
chr15	34978341	34988287	34978341	34988287	-	ENST00000356321.4@ZNF770	ENST00000356321.4	protein_coding	34988116,34987557,34978341	34988287,34987673,34983490	Gene ID= ENSG00000198146.4 TPM= 11.68 Transcript Type= protein_coding
chr15	35370882	35546168	35370882	35546168	-	ENST00000256538.8@DPH6	ENST00000256538.8	protein_coding	35546119,35542413,35538274,35454747,35450685,35410835,35381822,35373521,35370882	35546168,35542507,35538467,35454820,35450803,35410896,35381916,35373608,35372203	Gene ID= ENSG00000134146.11 TPM= 5.31 Transcript Type= protein_coding
chr15	36106927	36157979	36106927	36157979	+	transcript484.chr15.nnic@NA	transcript484.chr15.nnic	NA	36106927,36157151	36107198,36157979	Gene ID= novel_gene_chr15_485 TPM= 5.31 Transcript Type= NA
chr15	36109172	36109286	36109172	36109286	+	transcript487.chr15.nnic@NA	transcript487.chr15.nnic	NA	36109172	36109286	Gene ID= novel_gene_chr15_488 TPM= 2.12 Transcript Type= NA
chr15	36579634	36747256	36579634	36747256	+	ENST00000570265.5@C15orf41	ENST00000570265.5	protein_coding	36579634,36644278,36645223,36654098,36657833,36691685,36692126,36697323,36709223,36709856,36746935	36579961,36644323,36645287,36654158,36657905,36691764,36692175,36697390,36709288,36709961,36747256	Gene ID= ENSG00000186073.11 TPM= 2.12 Transcript Type= processed_transcript
chr15	36579611	36810223	36579611	36810223	+	ENST00000566621.5@C15orf41	ENST00000566621.5	protein_coding	36579611,36644278,36645223,36654098,36657833,36691685,36692126,36697323,36709223,36709856,36808324	36579961,36644323,36645287,36654158,36657905,36691764,36692175,36697390,36709288,36709961,36810223	Gene ID= ENSG00000186073.11 TPM= 11.68 Transcript Type= protein_coding
chr15	36579631	36696971	36579631	36696971	+	transcript509.chr15.nnic@C15orf41	transcript509.chr15.nnic	protein_coding	36579631,36644278,36645223,36654098,36657833,36691685,36692126,36694613	36579961,36644323,36645287,36654158,36657905,36691764,36692175,36696971	Gene ID= ENSG00000186073.11 TPM= 3.19 Transcript Type= NA
chr15	36598829	36599050	36598829	36599050	-	transcript518.chr15.nnic@NA	transcript518.chr15.nnic	NA	36598829	36599050	Gene ID= novel_gene_chr15_519 TPM= 2.12 Transcript Type= NA
chr15	36659967	36664690	36659967	36664690	-	transcript517.chr15.nnic@AC013640.1	transcript517.chr15.nnic	antisense_RNA	36662537,36659967	36664690,36662484	Gene ID= ENSG00000261191.1 TPM= 10.62 Transcript Type= NA
chr15	36743980	36747829	36743980	36747829	-	transcript520.chr15.nnic@NA	transcript520.chr15.nnic	NA	36743980	36747829	Gene ID= novel_gene_chr15_521 TPM= 3.19 Transcript Type= NA
chr15	36804676	36808561	36804676	36808561	-	transcript522.chr15.nnic@NA	transcript522.chr15.nnic	NA	36804676	36808561	Gene ID= novel_gene_chr15_523 TPM= 5.31 Transcript Type= NA
chr15	37002851	37008913	37002851	37008913	-	transcript540.chr15.nnic@NA	transcript540.chr15.nnic	NA	37002851	37008913	Gene ID= novel_gene_chr15_541 TPM= 2.12 Transcript Type= NA
chr15	38454154	38483665	38454154	38483665	+	ENST00000491535.5@FAM98B	ENST00000491535.5	protein_coding	38454154,38464032,38465269,38470227,38473505,38474182,38481292	38454232,38464177,38465403,38470405,38473585,38474298,38483665	Gene ID= ENSG00000171262.11 TPM= 3.19 Transcript Type= protein_coding
chr15	39366106	39366503	39366106	39366503	+	transcript549.chr15.nnic@NA	transcript549.chr15.nnic	NA	39366106	39366503	Gene ID= novel_gene_chr15_550 TPM= 2.12 Transcript Type= NA
chr15	39595517	39595621	39595517	39595621	+	transcript554.chr15.nnic@NA	transcript554.chr15.nnic	NA	39595517	39595621	Gene ID= novel_gene_chr15_555 TPM= 4.25 Transcript Type= NA
chr15	40029133	40035590	40029133	40035590	+	transcript567.chr15.nnic@EIF2AK4	transcript567.chr15.nnic	protein_coding	40029133,40030359,40032169,40032757,40034326,40035027	40029340,40030456,40032237,40032801,40034444,40035590	Gene ID= ENSG00000128829.11 TPM= 3.72 Transcript Type= NA
chr15	39934114	39953935	39934114	39953935	+	transcript569.chr15.nic@EIF2AK4	transcript569.chr15.nic	protein_coding	39934114,39939505,39943383,39949116,39953904	39934339,39939617,39943485,39949268,39953935	Gene ID= ENSG00000128829.11 TPM= 13.81 Transcript Type= NA
chr15	39934153	40035590	39934153	40035590	+	ENST00000263791.9@EIF2AK4	ENST00000263791.9	protein_coding	39934153,39939505,39943383,39949116,39953904,39955620,39961784,39965686,39967344,39972908,39973592,39976414,39978078,39985805,39987983,39990273,39992175,39992769,39996964,39998731,40000988,40002713,40003193,40007016,40008027,40009614,40011281,40016502,40017108,40019093,40020899,40022519,40025977,40029406,40030359,40032169,40032757,40034326,40035027	39934339,39939617,39943485,39949268,39953984,39955768,39961899,39965843,39967879,39973014,39973749,39976844,39978147,39985888,39988105,39990377,39992229,39992848,39997065,39998784,40001224,40002788,40003314,40007065,40008195,40009730,40011346,40016672,40017242,40019200,40021027,40022605,40026089,40029464,40030456,40032237,40032801,40034444,40035590	Gene ID= ENSG00000128829.11 TPM= 12.21 Transcript Type= protein_coding
chr15	40035739	40039188	40035739	40039188	-	ENST00000267884.10@SRP14	ENST00000267884.10	protein_coding	40039093,40038876,40038282,40036986,40035739	40039188,40038948,40038394,40037018,40036500	Gene ID= ENSG00000140319.10 TPM= 52.4 Transcript Type= protein_coding
chr15	40036041	40039164	40036041	40039164	-	ENST00000558527.5@SRP14	ENST00000558527.5	protein_coding	40039093,40038876,40038282,40037309,40036986,40036041	40039164,40038948,40038394,40037348,40037018,40036500	Gene ID= ENSG00000140319.10 TPM= 4.6 Transcript Type= processed_transcript
chr15	40039275	40065705	40039275	40065705	+	transcript578.chr15.nnic@SRP14-AS1	transcript578.chr15.nnic	lincRNA	40039275,40045961,40064461,40065221	40039448,40046069,40064601,40065705	Gene ID= ENSG00000248508.6 TPM= 3.19 Transcript Type= NA
chr15	40039275	40056999	40039275	40056999	+	transcript580.chr15.nnic@SRP14-AS1	transcript580.chr15.nnic	lincRNA	40039275,40045961,40056689	40039448,40046069,40056999	Gene ID= ENSG00000248508.6 TPM= 3.19 Transcript Type= NA
chr15	40039275	40046129	40039275	40046129	+	transcript586.chr15.nic@SRP14-AS1	transcript586.chr15.nic	lincRNA	40039275,40045961	40039448,40046129	Gene ID= ENSG00000248508.6 TPM= 2.12 Transcript Type= NA
chr15	40323664	40326715	40323664	40326715	+	ENST00000638170.1@INAFM2	ENST00000638170.1	protein_coding	40323664	40326715	Gene ID= ENSG00000259330.2 TPM= 124.27 Transcript Type= protein_coding
chr15	40331452	40340532	40331452	40340532	-	transcript593.chr15.nic@C15orf52	transcript593.chr15.nic	protein_coding	40339905,40339512,40338748,40338535,40337724,40337388,40336760,40336574,40335784,40331452	40340532,40339619,40338903,40338660,40337893,40337446,40336813,40336664,40335826,40335700	Gene ID= ENSG00000188549.12 TPM= 137.02 Transcript Type= NA
chr15	40333757	40340967	40333757	40340967	-	ENST00000559313.5@C15orf52	ENST00000559313.5	protein_coding	40340808,40339905,40339512,40338748,40338535,40337724,40337388,40336760,40336574,40335784,40333757	40340967,40340015,40339619,40338903,40338660,40337893,40337446,40336813,40336664,40335826,40335700	Gene ID= ENSG00000188549.12 TPM= 4.25 Transcript Type= protein_coding
chr15	40382721	40394245	40382721	40394245	+	ENST00000249776.12@KNSTRN	ENST00000249776.12	protein_coding	40382721,40383228,40386362,40387159,40389506,40389836,40391493,40391949,40393469	40383044,40383322,40386494,40387206,40389611,40389929,40391554,40392023,40394245	Gene ID= ENSG00000128944.13 TPM= 1.06 Transcript Type= protein_coding
chr15	40382979	40394160	40382979	40394160	+	ENST00000561169.5@KNSTRN	ENST00000561169.5	protein_coding	40382979,40383228,40386362,40387159,40389489,40389836,40391493,40391949,40393469	40383044,40383322,40386494,40387206,40389611,40389929,40391554,40392023,40394160	Gene ID= ENSG00000128944.13 TPM= 1.06 Transcript Type= nonsense_mediated_decay
chr15	40405795	40421299	40405795	40421299	+	ENST00000479013.6@IVD	ENST00000479013.6	protein_coding	40405795,40407939,40410628,40411260,40411555,40412991,40414889,40415401,40416078,40416290,40418130	40405971,40407990,40410797,40411353,40411691,40413087,40414982,40415482,40416182,40416362,40421299	Gene ID= ENSG00000128928.8 TPM= 14.87 Transcript Type= protein_coding
chr15	40405795	40418767	40405795	40418767	+	ENST00000487418.6@IVD	ENST00000487418.6	protein_coding	40405795,40407636,40407939,40410628,40411260,40411555,40412991,40414889,40415401,40416078,40416290,40418130	40405971,40407725,40407990,40410797,40411353,40411691,40413087,40414982,40415482,40416182,40416362,40418767	Gene ID= ENSG00000128928.8 TPM= 9.56 Transcript Type= protein_coding
chr15	40441212	40468242	40441212	40468242	+	ENST00000416165.5@BAHD1	ENST00000416165.5	protein_coding	40441212,40458451,40461912,40463861,40464471,40465335,40465941	40441268,40459896,40462294,40464020,40464547,40465435,40468242	Gene ID= ENSG00000140320.11 TPM= 21.24 Transcript Type= protein_coding
chr15	40440928	40459881	40440928	40459881	+	transcript629.chr15.nic@BAHD1	transcript629.chr15.nic	protein_coding	40440928,40458451	40441268,40459881	Gene ID= ENSG00000140320.11 TPM= 3.19 Transcript Type= NA
chr15	40553099	40565054	40553099	40565054	-	transcript632.chr15.nnic@CCDC32	transcript632.chr15.nnic	protein_coding	40564976,40562772,40557216,40553942,40553099	40565054,40563027,40557372,40554127,40553905	Gene ID= ENSG00000128891.15 TPM= 8.5 Transcript Type= NA
chr15	40553104	40565057	40553104	40565057	-	ENST00000416810.6@CCDC32	ENST00000416810.6	protein_coding	40564976,40562772,40557216,40553104	40565057,40563027,40557372,40554127	Gene ID= ENSG00000128891.15 TPM= 16.99 Transcript Type= protein_coding
chr15	40546710	40551255	40546710	40551255	-	transcript641.chr15.nnic@NA	transcript641.chr15.nnic	NA	40546710	40551255	Gene ID= novel_gene_chr15_642 TPM= 3.19 Transcript Type= NA
chr15	40569300	40574943	40569300	40574943	+	ENST00000315616.11@RPUSD2	ENST00000315616.11	protein_coding	40569300,40571604,40573527	40569943,40571900,40574943	Gene ID= ENSG00000166133.17 TPM= 3.19 Transcript Type= protein_coding
chr15	40693741	40695107	40693741	40695107	-	ENST00000499988.2@RAD51-AS1	ENST00000499988.2	processed_transcript	40695012,40693741	40695107,40694795	Gene ID= ENSG00000245849.6 TPM= 1.06 Transcript Type= retained_intron
chr15	40735888	40755260	40735888	40755260	-	ENST00000338376.7@RMDN3	ENST00000338376.7	protein_coding	40755083,40754597,40751986,40751426,40744977,40744047,40740133,40738501,40737965,40737628,40737288,40737124,40735888	40755260,40754790,40752178,40751569,40745259,40744149,40740193,40738576,40738042,40737726,40737341,40737204,40736594	Gene ID= ENSG00000137824.15 TPM= 32.4 Transcript Type= protein_coding
chr15	40735888	40755282	40735888	40755282	-	transcript650.chr15.nic@RMDN3	transcript650.chr15.nic	protein_coding	40755199,40754597,40751986,40751426,40744977,40744047,40740133,40738501,40737965,40737628,40737288,40737124,40735888	40755282,40754790,40752178,40751569,40745259,40744149,40740193,40738576,40738042,40737726,40737341,40737204,40736594	Gene ID= ENSG00000137824.15 TPM= 26.02 Transcript Type= NA
chr15	40764020	40767710	40764020	40767710	+	ENST00000260447.5@GCHFR	ENST00000260447.5	protein_coding	40764020,40765827,40767226	40764216,40765921,40767710	Gene ID= ENSG00000137880.5 TPM= 3.19 Transcript Type= protein_coding
chr15	40765155	40807477	40765155	40807477	-	ENST00000220496.8@DNAJC17	ENST00000220496.8	protein_coding	40807369,40779928,40779545,40779223,40776542,40776196,40775553,40775031,40774356,40773727,40765155	40807477,40779997,40779603,40779310,40776627,40776292,40775596,40775108,40774436,40773837,40768062	Gene ID= ENSG00000104129.9 TPM= 11.68 Transcript Type= protein_coding
chr15	40807089	40815084	40807089	40815084	+	ENST00000355341.8@ZFYVE19	ENST00000355341.8	protein_coding	40807089,40809119,40809408,40809852,40810071,40810649,40812699,40813338,40813713,40813943,40814148	40807868,40809240,40809458,40809970,40810216,40810757,40812902,40813417,40813811,40814070,40815084	Gene ID= ENSG00000166140.17 TPM= 18.06 Transcript Type= protein_coding
chr15	40807089	40814565	40807089	40814565	+	ENST00000564258.5@ZFYVE19	ENST00000564258.5	protein_coding	40807089,40809119,40809408,40809852,40810071,40810649,40812699,40813338,40813713,40813943,40814148	40807671,40809240,40809458,40809970,40810216,40810757,40812902,40813417,40813811,40814070,40814565	Gene ID= ENSG00000166140.17 TPM= 1.06 Transcript Type= protein_coding
chr15	40844018	40857655	40844018	40857655	+	ENST00000562057.5@SPINT1	ENST00000562057.5	protein_coding	40844018,40844490,40853124,40853489,40853711,40854060,40854397,40854639,40855892,40856276,40856770	40844186,40845029,40853251,40853627,40853881,40854086,40854522,40854689,40856062,40856323,40857655	Gene ID= ENSG00000166145.14 TPM= 1.06 Transcript Type= protein_coding
chr15	40894430	40903975	40894430	40903975	+	ENST00000220509.9@VPS18	ENST00000220509.9	protein_coding	40894430,40895938,40898907,40899144,40902616	40894859,40896079,40898998,40901014,40903975	Gene ID= ENSG00000104142.10 TPM= 40.36 Transcript Type= protein_coding
chr15	40978893	41116153	40978893	41116153	-	ENST00000401393.7@INO80	ENST00000401393.7	protein_coding	41115973,41096168,41095759,41095601,41092027,41087562,41085369,41081020,41079701,41074370,41073428,41071849,41070467,41069570,41059867,41058639,41056622,41055247,41053929,41049935,41049287,41048212,41047408,41044904,41027596,41020900,41016088,41005593,40997529,40987816,40987091,40985338,40984197,40983762,40982862,40979492,40978893	41116153,41096353,41095928,41095668,41092182,41087682,41085583,41081073,41079904,41074565,41073495,41072058,41070547,41069665,41059926,41058781,41056706,41055364,41054014,41050102,41049420,41048276,41047501,41045075,41027736,41021125,41016215,41005687,40997601,40987974,40987193,40985426,40984352,40983921,40983077,40980440,40979257	Gene ID= ENSG00000128908.15 TPM= 2.12 Transcript Type= protein_coding
chr15	41231143	41281890	41231143	41281890	+	ENST00000334660.9@CHP1	ENST00000334660.9	protein_coding	41231143,41243667,41256910,41262756,41270557,41278767,41279336	41231449,41243739,41256990,41262883,41270618,41278889,41281890	Gene ID= ENSG00000187446.11 TPM= 116.84 Transcript Type= protein_coding
chr15	41283965	41301999	41283965	41301999	+	transcript688.chr15.nnic@OIP5-AS1	transcript688.chr15.nnic	processed_transcript	41283965,41285225,41286011,41298041,41299239	41284110,41285363,41286100,41298781,41301999	Gene ID= ENSG00000247556.6 TPM= 16.99 Transcript Type= NA
chr15	41284032	41309737	41284032	41309737	+	ENST00000501665.2@OIP5-AS1	ENST00000501665.2	processed_transcript	41284032,41285225,41286011,41308567,41308720	41284110,41285363,41286100,41308624,41309737	Gene ID= ENSG00000247556.6 TPM= 1.06 Transcript Type= antisense_RNA
chr15	41319241	41321053	41319241	41321053	-	transcript703.chr15.nnic@NA	transcript703.chr15.nnic	NA	41319241	41321053	Gene ID= novel_gene_chr15_704 TPM= 3.19 Transcript Type= NA
chr15	41387349	41402448	41387349	41402448	-	transcript709.chr15.nic@NDUFAF1	transcript709.chr15.nic	protein_coding	41402260,41396487,41394859,41388448,41387349	41402448,41397140,41395044,41388522,41387593	Gene ID= ENSG00000137806.8 TPM= 3.19 Transcript Type= NA
chr15	41387349	41402544	41387349	41402544	-	transcript710.chr15.nic@NDUFAF1	transcript710.chr15.nic	protein_coding	41402447,41396487,41394859,41388448,41387349	41402544,41397140,41395044,41388522,41387593	Gene ID= ENSG00000137806.8 TPM= 23.37 Transcript Type= NA
chr15	41387349	41402444	41387349	41402444	-	ENST00000260361.8@NDUFAF1	ENST00000260361.8	protein_coding	41402144,41396487,41394859,41388448,41387349	41402444,41397140,41395044,41388522,41387593	Gene ID= ENSG00000137806.8 TPM= 9.56 Transcript Type= protein_coding
chr15	41417104	41483563	41417104	41483563	+	ENST00000389629.8@RTF1	ENST00000389629.8	protein_coding	41417104,41438321,41452901,41457672,41464771,41466141,41470257,41471172,41474620,41475525,41475712,41476446,41477165,41477458,41478548,41479103,41480214,41480581	41417313,41438431,41453048,41457876,41464885,41466252,41470392,41471349,41474702,41475612,41475819,41476523,41477286,41477515,41478625,41479198,41480325,41483563	Gene ID= ENSG00000137815.14 TPM= 19.12 Transcript Type= protein_coding
chr15	41493055	41493784	41493055	41493784	-	transcript731.chr15.nnic@NA	transcript731.chr15.nnic	NA	41493278,41493055	41493784,41493165	Gene ID= novel_gene_chr15_732 TPM= 2.12 Transcript Type= NA
chr15	41525667	41544270	41525667	41544270	-	transcript737.chr15.nic@RPAP1	transcript737.chr15.nic	protein_coding	41544219,41536945,41536501,41536129,41535512,41534714,41531023,41529864,41529470,41528235,41527860,41527423,41527167,41525667	41544270,41537201,41536649,41536218,41535632,41534935,41531202,41529979,41529568,41528336,41528027,41527605,41527301,41527068	Gene ID= ENSG00000103932.11 TPM= 2.66 Transcript Type= NA
chr15	41531023	41534608	41531023	41534608	-	transcript738.chr15.nic@RPAP1	transcript738.chr15.nic	protein_coding	41533346,41531023	41534608,41531202	Gene ID= ENSG00000103932.11 TPM= 2.12 Transcript Type= NA
chr15	41517176	41544259	41517176	41544259	-	ENST00000304330.8@RPAP1	ENST00000304330.8	protein_coding	41544219,41536945,41536501,41536129,41535512,41534714,41531023,41529864,41529470,41528235,41527860,41527423,41527167,41526898,41524991,41524096,41523771,41523245,41522765,41522098,41521738,41520391,41518006,41517798,41517176	41544259,41537201,41536649,41536218,41535632,41534935,41531202,41529979,41529568,41528336,41528027,41527605,41527301,41527068,41525148,41524254,41523972,41523354,41522960,41522250,41521880,41521147,41518182,41517857,41517691	Gene ID= ENSG00000103932.11 TPM= 28.15 Transcript Type= protein_coding
chr15	41621234	41713482	41621234	41713482	+	transcript742.chr15.nnic@MGA	transcript742.chr15.nnic	protein_coding	41621234,41668828,41696075,41698863,41699064,41707728,41708104,41710691,41713151	41621298,41669958,41697023,41698941,41699159,41707859,41708208,41711349,41713482	Gene ID= ENSG00000174197.16 TPM= 2.12 Transcript Type= NA
chr15	41660431	41713482	41660431	41713482	+	transcript745.chr15.nnic@MGA	transcript745.chr15.nnic	protein_coding	41660431,41668828,41696075,41698863,41699064,41707728,41708104,41710691,41713151	41660501,41669958,41697023,41698941,41699159,41707859,41708208,41711349,41713482	Gene ID= ENSG00000174197.16 TPM= 2.12 Transcript Type= NA
chr15	41759465	41769943	41759465	41769943	+	transcript748.chr15.nnic@MGA	transcript748.chr15.nnic	protein_coding	41759465,41761739,41762129,41764884,41766004	41760529,41761850,41762362,41765062,41769943	Gene ID= ENSG00000174197.16 TPM= 4.25 Transcript Type= NA
chr15	41621536	41713482	41621536	41713482	+	ENST00000563576.5@MGA	ENST00000563576.5	protein_coding	41621536,41668828,41696075,41698863,41699064,41707728,41708104,41710691,41713151	41621589,41669958,41697023,41698941,41699159,41707859,41708208,41711349,41713482	Gene ID= ENSG00000174197.16 TPM= 5.31 Transcript Type= protein_coding
chr15	41784812	41786368	41784812	41786368	+	transcript752.chr15.nnic@NA	transcript752.chr15.nnic	NA	41784812	41786368	Gene ID= novel_gene_chr15_753 TPM= 2.12 Transcript Type= NA
chr15	41828072	41837581	41828072	41837581	+	transcript766.chr15.nic@JMJD7	transcript766.chr15.nic	protein_coding	41828072,41834740,41835588,41836148,41836475,41837068	41828188,41835223,41835644,41836243,41836940,41837581	Gene ID= ENSG00000243789.10 TPM= 2.12 Transcript Type= NA
chr15	41828085	41837581	41828085	41837581	+	ENST00000397299.8@JMJD7	ENST00000397299.8	protein_coding	41828085,41834740,41834970,41835588,41836148,41836475,41836781,41837068	41828188,41834893,41835223,41835644,41836243,41836551,41836940,41837581	Gene ID= ENSG00000243789.10 TPM= 43.55 Transcript Type= protein_coding
chr15	41892771	41895946	41892771	41895946	+	transcript786.chr15.nnic@AC020659.1	transcript786.chr15.nnic	antisense_RNA	41892771,41895227,41895523	41893078,41895336,41895946	Gene ID= ENSG00000174171.5 TPM= 2.12 Transcript Type= NA
chr15	41892771	41895935	41892771	41895935	+	transcript787.chr15.nnic@AC020659.1	transcript787.chr15.nnic	antisense_RNA	41892771,41895227,41895580	41893078,41895336,41895935	Gene ID= ENSG00000174171.5 TPM= 10.62 Transcript Type= NA
chr15	41892817	41895935	41892817	41895935	+	transcript793.chr15.nnic@AC020659.1	transcript793.chr15.nnic	antisense_RNA	41892817,41895227,41895580	41894976,41895336,41895935	Gene ID= ENSG00000174171.5 TPM= 3.19 Transcript Type= NA
chr15	41892822	41895941	41892822	41895941	+	transcript794.chr15.nnic@AC020659.1	transcript794.chr15.nnic	antisense_RNA	41892822,41895523,41895782	41895336,41895578,41895941	Gene ID= ENSG00000174171.5 TPM= 2.12 Transcript Type= NA
chr15	41892921	41898859	41892921	41898859	+	transcript798.chr15.nic@AC020659.1	transcript798.chr15.nic	antisense_RNA	41892921,41898167	41897521,41898859	Gene ID= ENSG00000174171.5 TPM= 3.19 Transcript Type= NA
chr15	41894985	41895943	41894985	41895943	+	ENST00000568861.1@AC020659.1	ENST00000568861.1	antisense_RNA	41894985	41895943	Gene ID= ENSG00000174171.5 TPM= 11.68 Transcript Type= antisense_RNA
chr15	41892793	41895935	41892793	41895935	+	ENST00000309874.2@AC020659.1	ENST00000309874.2	antisense_RNA	41892793,41895580	41895336,41895935	Gene ID= ENSG00000174171.5 TPM= 31.86 Transcript Type= antisense_RNA
chr15	41895939	41972578	41895939	41972578	-	ENST00000220325.8@EHD4	ENST00000220325.8	protein_coding	41972259,41953764,41943067,41919210,41909699,41895939	41972578,41953940,41943164,41919622,41909863,41901181	Gene ID= ENSG00000103966.10 TPM= 16.99 Transcript Type= protein_coding
chr15	41899440	41966113	41899440	41966113	-	transcript775.chr15.nnic@EHD4	transcript775.chr15.nnic	protein_coding	41965988,41953764,41943067,41919210,41909699,41899440	41966113,41953940,41943164,41919622,41909863,41901181	Gene ID= ENSG00000103966.10 TPM= 31.86 Transcript Type= NA
chr15	41941604	41972552	41941604	41972552	-	ENST00000569223.1@EHD4	ENST00000569223.1	protein_coding	41972259,41953764,41941604	41972552,41953940,41943164	Gene ID= ENSG00000103966.10 TPM= 4.25 Transcript Type= retained_intron
chr15	41968455	41972556	41968455	41972556	-	transcript803.chr15.nnic@NA	transcript803.chr15.nnic	NA	41968455	41972556	Gene ID= novel_gene_chr15_804 TPM= 4.25 Transcript Type= NA
chr15	42158701	42208316	42158701	42208316	-	ENST00000318006.9@VPS39	ENST00000318006.9	protein_coding	42208081,42199896,42191496,42191125,42189114,42187758,42187271,42184517,42178450,42178218,42173723,42169724,42167394,42166772,42166563,42166159,42165718,42164996,42164358,42163626,42163350,42162332,42162032,42161682,42158701	42208316,42199961,42191560,42191167,42189208,42187856,42187363,42184700,42178570,42178338,42173852,42169866,42167537,42166913,42166649,42166232,42165816,42165113,42164486,42163728,42163395,42162481,42162166,42161773,42160829	Gene ID= ENSG00000166887.15 TPM= 72.23 Transcript Type= protein_coding
chr15	42179666	42184073	42179666	42184073	+	transcript817.chr15.nnic@NA	transcript817.chr15.nnic	NA	42179666	42184073	Gene ID= novel_gene_chr15_818 TPM= 9.56 Transcript Type= NA
chr15	42210532	42273663	42210532	42273663	-	ENST00000389834.8@TMEM87A	ENST00000389834.8	protein_coding	42273255,42272063,42267947,42264090,42261196,42260958,42244050,42239670,42237432,42236320,42233213,42231192,42228712,42227711,42226806,42220062,42219581,42218323,42217803,42210532	42273663,42272123,42268032,42264203,42261249,42261002,42244167,42239731,42237615,42236419,42233306,42231260,42228820,42227769,42226909,42220135,42219642,42218378,42217833,42211749	Gene ID= ENSG00000103978.15 TPM= 10.62 Transcript Type= protein_coding
chr15	42211139	42273432	42211139	42273432	-	transcript823.chr15.nic@TMEM87A	transcript823.chr15.nic	protein_coding	42273255,42272063,42267947,42264090,42261196,42260958,42244050,42239670,42237432,42236320,42233213,42231844,42228712,42227711,42226806,42220062,42219581,42218323,42217803,42211139	42273432,42272123,42268032,42264203,42261249,42261002,42244167,42239731,42237615,42236419,42233306,42231915,42228820,42227769,42226909,42220135,42219642,42218378,42217833,42211749	Gene ID= ENSG00000103978.15 TPM= 2.12 Transcript Type= NA
chr15	42226312	42273419	42226312	42273419	-	transcript824.chr15.nic@TMEM87A	transcript824.chr15.nic	protein_coding	42273255,42272063,42267947,42264090,42261196,42260958,42244050,42239670,42237432,42236320,42233213,42231192,42228712,42227711,42226312	42273419,42272123,42268032,42264203,42261249,42261002,42244167,42239731,42237615,42236419,42233306,42231260,42228820,42227769,42226909	Gene ID= ENSG00000103978.15 TPM= 3.19 Transcript Type= NA
chr15	42439453	42491134	42439453	42491134	-	transcript840.chr15.nic@ZNF106	transcript840.chr15.nic	protein_coding	42490980,42472236,42466053,42456958,42449771,42448072,42446589,42444827,42444202,42442073,42439453	42491134,42472321,42466114,42457158,42451954,42448705,42446658,42444981,42444262,42442414,42439813	Gene ID= ENSG00000103994.16 TPM= 27.78 Transcript Type= NA
chr15	42446626	42491142	42446626	42491142	-	transcript846.chr15.nic@ZNF106	transcript846.chr15.nic	protein_coding	42490980,42472236,42466053,42448072,42446626	42491142,42472321,42466114,42448705,42446658	Gene ID= ENSG00000103994.16 TPM= 11.47 Transcript Type= NA
chr15	42446626	42457556	42446626	42457556	-	ENST00000565948.1@ZNF106	ENST00000565948.1	protein_coding	42457217,42449771,42448072,42446626	42457556,42451954,42448705,42446658	Gene ID= ENSG00000103994.16 TPM= 9.7 Transcript Type= protein_coding
chr15	42412823	42457532	42412823	42457532	-	ENST00000263805.8@ZNF106	ENST00000263805.8	protein_coding	42456958,42449771,42448072,42446589,42444827,42444202,42442073,42439033,42438612,42437232,42435384,42428018,42424834,42423998,42422501,42421917,42421061,42417805,42412823	42457532,42451954,42448705,42446658,42444981,42444262,42442414,42439813,42438667,42437377,42435518,42428134,42425025,42424060,42422620,42421988,42421132,42417951,42417360	Gene ID= ENSG00000103994.16 TPM= 330.14 Transcript Type= protein_coding
chr15	42415121	42491105	42415121	42491105	-	ENST00000565380.5@ZNF106	ENST00000565380.5	protein_coding	42490980,42472236,42466053,42448072,42446589,42444827,42444202,42442073,42439033,42438612,42437232,42435384,42428018,42424834,42423998,42422501,42421917,42421061,42417805,42415121	42491105,42472321,42466114,42448705,42446658,42444981,42444262,42442414,42439813,42438667,42437377,42435518,42428134,42425025,42424060,42422620,42421988,42421132,42417951,42417360	Gene ID= ENSG00000103994.16 TPM= 77.52 Transcript Type= protein_coding
chr15	42415123	42448298	42415123	42448298	-	ENST00000565500.5@ZNF106	ENST00000565500.5	protein_coding	42448072,42446589,42444827,42444202,42442073,42439033,42438612,42437232,42435384,42428018,42424834,42423998,42422501,42421917,42421061,42417805,42415123	42448298,42446658,42444981,42444262,42442414,42439552,42438667,42437377,42435518,42428134,42425025,42424060,42422620,42421988,42421132,42417951,42417360	Gene ID= ENSG00000103994.16 TPM= 65.93 Transcript Type= protein_coding
chr15	42415740	42457513	42415740	42457513	-	ENST00000565611.5@ZNF106	ENST00000565611.5	protein_coding	42457217,42448072,42446589,42444827,42444202,42442073,42439033,42438612,42437232,42435384,42428018,42424834,42423998,42422501,42421917,42421061,42417805,42415740	42457513,42448705,42446658,42444981,42444262,42442414,42439813,42438667,42437377,42435518,42428134,42425025,42424060,42422620,42421988,42421132,42417951,42417360	Gene ID= ENSG00000103994.16 TPM= 10.07 Transcript Type= protein_coding
chr15	42450978	42491123	42450978	42491123	-	ENST00000564754.5@ZNF106	ENST00000564754.5	protein_coding	42490980,42472236,42466053,42456958,42450978	42491123,42472321,42466114,42457158,42451954	Gene ID= ENSG00000103994.16 TPM= 13.81 Transcript Type= protein_coding
chr15	42439159	42440997	42439159	42440997	+	transcript856.chr15.nnic@NA	transcript856.chr15.nnic	NA	42439159	42440997	Gene ID= novel_gene_chr15_857 TPM= 5.31 Transcript Type= NA
chr15	42495581	42533059	42495581	42533059	+	transcript869.chr15.nnic@SNAP23	transcript869.chr15.nnic	protein_coding	42495581,42511833,42512955,42513399,42515237,42521448,42528262,42529675,42531413	42495713,42511903,42512996,42513447,42515354,42521480,42528420,42529819,42533059	Gene ID= ENSG00000092531.9 TPM= 25.49 Transcript Type= NA
chr15	42495260	42533061	42495260	42533061	+	ENST00000249647.7@SNAP23	ENST00000249647.7	protein_coding	42495260,42511833,42512955,42513399,42515237,42528262,42529675,42531413	42495713,42511903,42512996,42513447,42515354,42528420,42529819,42533061	Gene ID= ENSG00000092531.9 TPM= 45.14 Transcript Type= protein_coding
chr15	42495581	42522736	42495581	42522736	+	transcript875.chr15.nnic@SNAP23	transcript875.chr15.nnic	protein_coding	42495581,42511833,42512955,42513399,42515237,42521448	42495713,42511903,42512996,42513447,42515354,42522736	Gene ID= ENSG00000092531.9 TPM= 7.44 Transcript Type= NA
chr15	42544190	42548786	42544190	42548786	-	transcript885.chr15.nic@LRRC57	transcript885.chr15.nic	protein_coding	42548693,42548351,42548106,42547261,42544190	42548786,42548456,42548244,42547529,42545262	Gene ID= ENSG00000180979.9 TPM= 2.12 Transcript Type= NA
chr15	42542522	42548773	42542522	42548773	-	ENST00000397130.7@LRRC57	ENST00000397130.7	protein_coding	42548693,42548351,42548106,42547261,42545077,42542522	42548773,42548456,42548244,42547529,42545262,42544124	Gene ID= ENSG00000180979.9 TPM= 11.68 Transcript Type= protein_coding
chr15	42548828	42567858	42548828	42567858	+	ENST00000568876.5@HAUS2	ENST00000568876.5	protein_coding	42548828,42559339,42561270,42563749,42566607	42548965,42559408,42561402,42563857,42567858	Gene ID= ENSG00000137814.10 TPM= 1.06 Transcript Type= protein_coding
chr15	42548810	42569994	42548810	42569994	+	ENST00000260372.7@HAUS2	ENST00000260372.7	protein_coding	42548810,42558198,42559339,42561270,42563749,42566607	42548965,42558290,42559408,42561402,42563857,42569994	Gene ID= ENSG00000137814.10 TPM= 3.19 Transcript Type= protein_coding
chr15	42575659	42720981	42575659	42720981	+	ENST00000290607.11@STARD9	ENST00000290607.11	protein_coding	42575659,42583346,42585521,42634856,42637907,42638026,42638700,42651016,42652520,42661158,42662794,42663281,42663820,42665253,42665786,42669158,42674440,42674827,42675664,42675872,42681422,42682104,42684116,42694528,42695140,42695743,42716677,42716927,42717731,42717977,42718435,42718752,42719473	42575762,42583415,42585637,42634972,42637939,42638087,42638812,42651085,42652592,42661225,42662891,42663490,42663917,42665330,42665848,42669337,42674491,42674964,42675746,42675975,42681612,42682575,42694342,42694725,42695323,42695880,42716764,42717048,42717795,42718179,42718514,42718910,42720981	Gene ID= ENSG00000159433.11 TPM= 1.06 Transcript Type= protein_coding
chr15	42723562	42737126	42723562	42737126	-	ENST00000356231.3@CDAN1	ENST00000356231.3	protein_coding	42737013,42736302,42735875,42735510,42735261,42735100,42734226,42733938,42733097,42732333,42731620,42731211,42730925,42730598,42730128,42729796,42729568,42729229,42729023,42728652,42728204,42727955,42727621,42726310,42726097,42725489,42725144,42723562	42737126,42736780,42736078,42735679,42735374,42735178,42734346,42734047,42733186,42732408,42731825,42731331,42731071,42730764,42730215,42729885,42729622,42729362,42729126,42728810,42728267,42728033,42727769,42726417,42726160,42725670,42725251,42724616	Gene ID= ENSG00000140326.12 TPM= 4.25 Transcript Type= protein_coding
chr15	42734781	42737167	42734781	42737167	-	transcript907.chr15.nnic@NA	transcript907.chr15.nnic	NA	42734781	42737167	Gene ID= novel_gene_chr15_908 TPM= 2.12 Transcript Type= NA
chr15	42738975	42741358	42738975	42741358	-	transcript909.chr15.nnic@NA	transcript909.chr15.nnic	NA	42738975	42741358	Gene ID= novel_gene_chr15_910 TPM= 3.19 Transcript Type= NA
chr15	43133762	43185146	43133762	43185146	+	transcript915.chr15.nic@TMEM62	transcript915.chr15.nic	protein_coding	43133762,43134257,43135512,43146493,43148755,43149029,43151790,43154672,43160681,43169593,43178607,43181181,43184260	43133982,43134368,43135649,43146634,43148879,43149151,43151945,43154831,43160794,43169677,43178711,43181299,43185146	Gene ID= ENSG00000137842.6 TPM= 3.19 Transcript Type= NA
chr15	43185257	43197176	43185257	43197176	+	ENST00000300213.8@CCNDBP1	ENST00000300213.8	protein_coding	43185257,43185820,43186154,43189199,43190055,43190325,43190966,43191395,43192743,43194415,43194727	43185607,43185879,43186233,43189280,43190151,43190398,43191042,43191675,43192803,43194461,43197176	Gene ID= ENSG00000166946.13 TPM= 114.71 Transcript Type= protein_coding
chr15	43185319	43195192	43185319	43195192	+	transcript930.chr15.nic@CCNDBP1	transcript930.chr15.nic	protein_coding	43185319,43189199,43190325,43190966,43191395,43192743,43194415,43194727	43185607,43189280,43190398,43191042,43191675,43192803,43194461,43195192	Gene ID= ENSG00000166946.13 TPM= 16.99 Transcript Type= NA
chr15	43185439	43195180	43185439	43195180	+	ENST00000568507.5@CCNDBP1	ENST00000568507.5	protein_coding	43185439,43185820,43186154,43189199,43190325,43190966,43191395,43192743,43194415,43194727	43185607,43185879,43186233,43189280,43190398,43191042,43191675,43192803,43194461,43195180	Gene ID= ENSG00000166946.13 TPM= 4.25 Transcript Type= nonsense_mediated_decay
chr15	43327776	43330612	43327776	43330612	-	transcript933.chr15.nnic@NA	transcript933.chr15.nnic	NA	43327776	43330612	Gene ID= novel_gene_chr15_934 TPM= 9.56 Transcript Type= NA
chr15	43330674	43353898	43330674	43353898	+	transcript938.chr15.nic@ADAL	transcript938.chr15.nic	protein_coding	43330674,43331900,43333311,43334945,43335696,43336626,43340265,43342994,43345854,43347016,43348907,43350941,43351751	43330859,43332000,43333434,43335170,43335826,43336686,43340352,43343075,43345980,43347096,43349045,43351041,43353898	Gene ID= ENSG00000168803.14 TPM= 7.44 Transcript Type= NA
chr15	43330674	43353898	43330674	43353898	+	ENST00000428046.7@ADAL	ENST00000428046.7	protein_coding	43330674,43331900,43333311,43334945,43335696,43336626,43340265,43342994,43345854,43348907,43350941,43351751	43330859,43332000,43333434,43335170,43335826,43336686,43340352,43343075,43345980,43349045,43351041,43353898	Gene ID= ENSG00000168803.14 TPM= 3.19 Transcript Type= protein_coding
chr15	43407216	43493127	43407216	43493127	-	ENST00000450115.6@TP53BP1	ENST00000450115.6	protein_coding	43493037,43492284,43492002,43491669,43480895,43479859,43479397,43477593,43475565,43474673,43469858,43455892,43447366,43446387,43441526,43438324,43432194,43428016,43421855,43421025,43420305,43416225,43415594,43413119,43409647,43408897,43407943,43407216	43493127,43492468,43492095,43491753,43481022,43480017,43479526,43477759,43475694,43474767,43470066,43457218,43447485,43446590,43441583,43438416,43432677,43428168,43422126,43421174,43420735,43416416,43415809,43413328,43409741,43409096,43408088,43407570	Gene ID= ENSG00000067369.13 TPM= 4.25 Transcript Type= protein_coding
chr15	43510929	43522721	43510929	43522721	+	transcript961.chr15.nic@MAP1A	transcript961.chr15.nic	protein_coding	43510929,43512190,43520641,43520972,43521324	43511226,43512291,43520723,43521112,43522721	Gene ID= ENSG00000166963.12 TPM= 103.03 Transcript Type= NA
chr15	43517603	43522721	43517603	43522721	+	transcript962.chr15.nic@MAP1A	transcript962.chr15.nic	protein_coding	43517603,43520641,43520972,43521324	43517700,43520723,43521112,43522721	Gene ID= ENSG00000166963.12 TPM= 160.39 Transcript Type= NA
chr15	43527152	43531620	43527152	43531620	+	transcript968.chr15.nic@MAP1A	transcript968.chr15.nic	protein_coding	43527152,43529650,43530069	43529508,43529870,43531620	Gene ID= ENSG00000166963.12 TPM= 219.87 Transcript Type= NA
chr15	43523040	43525773	43523040	43525773	+	transcript971.chr15.nnic@NA	transcript971.chr15.nnic	NA	43523040	43525773	Gene ID= novel_gene_chr15_972 TPM= 12.75 Transcript Type= NA
chr15	43744209	43746308	43744209	43746308	-	transcript989.chr15.nic@CATSPER2P1	transcript989.chr15.nic	transcribed_unprocessed_pseudogene	43746214,43745022,43744209	43746308,43745167,43744568	Gene ID= ENSG00000205771.6 TPM= 2.12 Transcript Type= NA
chr15	43746392	43773279	43746392	43773279	+	ENST00000300289.9@PDIA3	ENST00000300289.9	protein_coding	43746392,43753824,43756649,43761424,43763077,43765450,43765887,43766728,43768489,43769518,43770250,43770523,43771105	43746706,43753902,43756766,43761531,43763206,43765566,43766012,43766910,43768597,43769646,43770329,43770580,43773279	Gene ID= ENSG00000167004.12 TPM= 9.56 Transcript Type= protein_coding
chr15	43792327	43801873	43792327	43801873	+	transcript992.chr15.nic@SERF2	transcript992.chr15.nic	protein_coding	43792327,43792975,43798869,43799619,43800495,43801132,43801518,43801711	43792383,43793083,43799107,43800148,43800784,43801187,43801569,43801873	Gene ID= ENSG00000140264.19 TPM= 72.23 Transcript Type= NA
chr15	43792368	43794046	43792368	43794046	+	ENST00000403425.5@SERF2	ENST00000403425.5	protein_coding	43792368,43792975,43793710	43792611,43793083,43794046	Gene ID= ENSG00000140264.19 TPM= 27.97 Transcript Type= protein_coding
chr15	43792347	43794046	43792347	43794046	+	ENST00000339624.9@SERF2	ENST00000339624.9	protein_coding	43792347,43792975,43793687	43792383,43793083,43794046	Gene ID= ENSG00000140264.19 TPM= 791.66 Transcript Type= protein_coding
chr15	43792337	43796089	43792337	43796089	+	ENST00000445816.5@SERF2	ENST00000445816.5	protein_coding	43792337,43792975,43793710,43794374	43792383,43793083,43793936,43796089	Gene ID= ENSG00000140264.19 TPM= 9.56 Transcript Type= nonsense_mediated_decay
chr15	43796142	43802082	43796142	43802082	+	ENST00000406925.5@HYPK	ENST00000406925.5	protein_coding	43796142,43800495,43801132,43801518,43801711	43800148,43800784,43801187,43801569,43802082	Gene ID= ENSG00000242028.6 TPM= 1.06 Transcript Type= protein_coding
chr15	43804492	43824802	43804492	43824802	-	ENST00000267812.3@MFAP1	ENST00000267812.3	protein_coding	43824491,43817229,43814945,43814501,43813249,43812987,43809755,43805376,43804492	43824802,43817448,43815074,43814688,43813357,43813147,43809914,43805465,43805276	Gene ID= ENSG00000140259.6 TPM= 9.56 Transcript Type= protein_coding
chr15	43826963	43868419	43826963	43868419	+	ENST00000263795.10@WDR76	ENST00000263795.10	protein_coding	43826963,43827965,43835061,43836161,43839605,43842415,43842628,43843901,43851087,43856946,43858671,43861333,43866128	43827092,43828366,43835150,43836216,43839728,43842516,43842671,43844054,43851245,43857163,43858823,43861386,43868419	Gene ID= ENSG00000092470.11 TPM= 1.06 Transcript Type= protein_coding
chr15	43826980	43867018	43826980	43867018	+	ENST00000381246.6@WDR76	ENST00000381246.6	protein_coding	43826980,43827965,43835061,43836161,43839605,43842415,43842628,43843901,43851087,43856946,43858671,43861333,43866128	43827118,43828366,43835150,43836216,43839728,43842516,43842671,43844054,43851245,43857163,43858823,43861386,43867018	Gene ID= ENSG00000092470.11 TPM= 2.12 Transcript Type= protein_coding
chr15	43870764	44195231	43870764	44195231	-	ENST00000417257.5@FRMD5	ENST00000417257.5	protein_coding	44194953,43924205,43919767,43919459,43909882,43905828,43902175,43891981,43888809,43888175,43885681,43884727,43883703,43870764	44195231,43924309,43919809,43919537,43909979,43905951,43902262,43892069,43888872,43888266,43885755,43884795,43883809,43874462	Gene ID= ENSG00000171877.20 TPM= 5.31 Transcript Type= protein_coding
chr15	43873275	43879877	43873275	43879877	-	transcript1015.chr15.nic@FRMD5	transcript1015.chr15.nic	protein_coding	43879499,43874119,43873275	43879877,43874462,43873939	Gene ID= ENSG00000171877.20 TPM= 56.29 Transcript Type= NA
chr15	44288731	44415758	44288731	44415758	+	ENST00000299957.10@CASC4	ENST00000299957.10	protein_coding	44288731,44322965,44328685,44331988,44337763,44338237,44379690,44380806,44402887,44413336	44289356,44323019,44328787,44332078,44337907,44338317,44379788,44380976,44403054,44415758	Gene ID= ENSG00000166734.18 TPM= 23.37 Transcript Type= protein_coding
chr15	44288760	44415757	44288760	44415757	+	ENST00000345795.6@CASC4	ENST00000345795.6	protein_coding	44288760,44322965,44328685,44331988,44337763,44338237,44379690,44380806,44413336	44289356,44323019,44328787,44332078,44337907,44338317,44379788,44380976,44415757	Gene ID= ENSG00000166734.18 TPM= 7.44 Transcript Type= protein_coding
chr15	44395179	44396546	44395179	44396546	-	transcript1024.chr15.nnic@NA	transcript1024.chr15.nnic	NA	44395179	44396546	Gene ID= novel_gene_chr15_1025 TPM= 3.19 Transcript Type= NA
chr15	44427234	44529038	44427234	44529038	+	ENST00000260327.8@CTDSPL2	ENST00000260327.8	protein_coding	44427234,44458991,44484224,44486551,44490784,44496380,44497027,44499727,44514598,44514765,44519169,44521311,44524109	44427772,44459200,44484362,44486700,44490999,44496458,44497138,44499813,44514660,44514844,44519295,44521406,44529038	Gene ID= ENSG00000137770.13 TPM= 2.12 Transcript Type= protein_coding
chr15	44533493	44536923	44533493	44536923	-	ENST00000313807.4@EIF3J-AS1	ENST00000313807.4	lincRNA	44536043,44533493	44536923,44535474	Gene ID= ENSG00000179523.4 TPM= 3.19 Transcript Type= lincRNA
chr15	44537043	44550930	44537043	44550930	+	transcript1047.chr15.nic@EIF3J	transcript1047.chr15.nic	protein_coding	44537043,44537324,44550876	44537237,44537427,44550930	Gene ID= ENSG00000104131.12 TPM= 23.37 Transcript Type= NA
chr15	44537057	44562803	44537057	44562803	+	ENST00000261868.9@EIF3J	ENST00000261868.9	protein_coding	44537057,44537324,44550876,44551431,44554553,44557489,44560249,44561018	44537237,44537427,44550930,44551522,44554667,44557650,44560322,44562803	Gene ID= ENSG00000104131.12 TPM= 26.55 Transcript Type= protein_coding
chr15	44562696	44663664	44562696	44663664	-	ENST00000261866.11@SPG11	ENST00000261866.11	protein_coding	44663391,44660432,44659079,44657095,44652129,44651491,44648866,44633505,44629233,44628669,44626331,44622728,44622220,44621759,44620190,44615363,44613430,44610840,44608444,44606025,44600467,44598631,44598265,44596784,44596083,44595259,44592331,44589252,44585636,44583814,44574902,44573547,44572683,44570525,44569398,44567424,44566217,44565854,44564547,44562696	44663664,44660616,44659303,44657296,44652266,44651939,44649011,44633637,44629388,44628844,44626507,44622799,44622347,44621934,44620403,44615566,44613536,44610985,44608605,44606091,44600632,44598836,44598373,44596943,44596355,44595459,44592438,44589414,44585850,44584558,44575041,44573745,44572820,44570658,44569505,44567592,44566305,44566009,44564698,44563301	Gene ID= ENSG00000104133.14 TPM= 6.37 Transcript Type= protein_coding
chr15	44711472	44718142	44711472	44718142	+	transcript1064.chr15.nic@B2M	transcript1064.chr15.nic	protein_coding	44711472,44715423	44711613,44718142	Gene ID= ENSG00000166710.17 TPM= 151.89 Transcript Type= NA
chr15	44729030	44733998	44729030	44733998	+	transcript1070.chr15.nnic@TRIM69	transcript1070.chr15.nnic	protein_coding	44729030,44731363,44733577	44729552,44732929,44733998	Gene ID= ENSG00000185880.12 TPM= 4.25 Transcript Type= NA
chr15	44729001	44734000	44729001	44734000	+	ENST00000560141.2@TRIM69	ENST00000560141.2	protein_coding	44729001,44731363	44729552,44734000	Gene ID= ENSG00000185880.12 TPM= 28.68 Transcript Type= processed_transcript
chr15	45023104	45077185	45023104	45077185	+	ENST00000267814.13@SORD	ENST00000267814.13	protein_coding	45023104,45040408,45043257,45061067,45065271,45068181,45068877,45072317,45073365	45023349,45040441,45043421,45061226,45065389,45068246,45069052,45072438,45077185	Gene ID= ENSG00000140263.13 TPM= 3.19 Transcript Type= protein_coding
chr15	45167214	45201175	45167214	45201175	-	ENST00000290894.12@SHF	ENST00000290894.12	protein_coding	45200727,45198772,45178165,45175219,45173576,45172147,45171883,45167214	45201175,45199120,45178306,45175425,45173716,45172318,45172002,45168133	Gene ID= ENSG00000138606.19 TPM= 1.06 Transcript Type= protein_coding
chr15	45167251	45187952	45167251	45187952	-	ENST00000560734.5@SHF	ENST00000560734.5	protein_coding	45187454,45178165,45175219,45167251	45187952,45178306,45175425,45168133	Gene ID= ENSG00000138606.19 TPM= 2.12 Transcript Type= protein_coding
chr15	45167214	45187956	45167214	45187956	-	ENST00000560540.5@SHF	ENST00000560540.5	protein_coding	45187454,45178165,45175219,45172149,45171883,45167214	45187956,45178306,45175425,45172318,45172002,45168133	Gene ID= ENSG00000138606.19 TPM= 1.06 Transcript Type= protein_coding
chr15	45361124	45378793	45361124	45378793	-	ENST00000396659.7@GATM	ENST00000396659.7	protein_coding	45378385,45376601,45369326,45368070,45366371,45366046,45364797,45363900,45361124	45378793,45376819,45369521,45368260,45366508,45366210,45364860,45364016,45362221	Gene ID= ENSG00000171766.15 TPM= 36.11 Transcript Type= protein_coding
chr15	45377253	45378752	45377253	45378752	-	transcript1096.chr15.nnic@NA	transcript1096.chr15.nnic	NA	45377253	45378752	Gene ID= novel_gene_chr15_1097 TPM= 2.12 Transcript Type= NA
chr15	45402331	45421419	45402331	45421419	+	ENST00000305560.10@SPATA5L1	ENST00000305560.10	protein_coding	45402331,45405320,45410372,45414571,45415587,45417269,45418557,45421043	45403518,45405505,45410530,45414780,45415779,45417399,45418682,45421419	Gene ID= ENSG00000171763.18 TPM= 20.18 Transcript Type= protein_coding
chr15	45402375	45421327	45402375	45421327	+	ENST00000531970.5@SPATA5L1	ENST00000531970.5	protein_coding	45402375,45405320,45410372,45414571,45415587,45417269,45418557,45421043	45403518,45405505,45410530,45414780,45415809,45417399,45418682,45421327	Gene ID= ENSG00000171763.18 TPM= 4.25 Transcript Type= nonsense_mediated_decay
chr15	45502051	45522754	45502051	45522754	-	transcript1110.chr15.nic@SLC30A4	transcript1110.chr15.nic	protein_coding	45522607,45521964,45511138,45502051	45522754,45522468,45511284,45502966	Gene ID= ENSG00000104154.6 TPM= 2.12 Transcript Type= NA
chr15	45587123	45609711	45587123	45609711	+	ENST00000220531.7@BLOC1S6	ENST00000220531.7	protein_coding	45587123,45592135,45603100,45605428,45606395	45587525,45592276,45603187,45605514,45609711	Gene ID= ENSG00000104164.10 TPM= 15.93 Transcript Type= protein_coding
chr15	45587379	45607773	45587379	45607773	+	ENST00000567523.5@BLOC1S6	ENST00000567523.5	protein_coding	45587379,45592135,45603104,45605428,45606395	45587525,45592276,45603187,45605514,45607773	Gene ID= ENSG00000104164.10 TPM= 2.12 Transcript Type= nonsense_mediated_decay
chr15	45634746	45691280	45634746	45691280	+	transcript1127.chr15.nic@SQOR	transcript1127.chr15.nic	protein_coding	45634746,45658907,45661955,45669928,45673607,45676101,45682478,45688337,45689039,45690973	45634894,45659157,45662125,45669981,45673801,45676310,45682661,45688404,45689217,45691280	Gene ID= ENSG00000137767.13 TPM= 10.09 Transcript Type= NA
chr15	45634740	45691294	45634740	45691294	+	ENST00000260324.11@SQOR	ENST00000260324.11	protein_coding	45634740,45658907,45661955,45669928,45673607,45676101,45682478,45688337,45689039,45690973	45635108,45659157,45662125,45669981,45673801,45676310,45682661,45688404,45689217,45691294	Gene ID= ENSG00000137767.13 TPM= 14.34 Transcript Type= protein_coding
chr15	48134631	48178517	48134631	48178517	-	ENST00000324324.11@MYEF2	ENST00000324324.11	protein_coding	48178077,48168631,48167349,48166121,48165933,48159613,48158769,48158175,48157993,48153792,48152234,48151874,48151473,48151100,48149163,48149032,48134631	48178517,48168839,48167401,48166128,48166026,48159804,48158922,48158224,48158056,48153893,48152284,48151942,48151571,48151171,48149371,48149083,48143071	Gene ID= ENSG00000104177.17 TPM= 5.31 Transcript Type= protein_coding
chr15	48157136	48178339	48157136	48178339	-	transcript1143.chr15.nnic@MYEF2	transcript1143.chr15.nnic	protein_coding	48178077,48168631,48167336,48165933,48159613,48158769,48158175,48157993,48157136	48178339,48168839,48167401,48166026,48159804,48158922,48158224,48158056,48157898	Gene ID= ENSG00000104177.17 TPM= 4.25 Transcript Type= NA
chr15	48141797	48178353	48141797	48178353	-	ENST00000267836.10@MYEF2	ENST00000267836.10	protein_coding	48178077,48168631,48167349,48166121,48165933,48159613,48158769,48158175,48157993,48153792,48152234,48151874,48151473,48149163,48149032,48141797	48178353,48168839,48167401,48166128,48166026,48159804,48158922,48158224,48158056,48153893,48152284,48151942,48151571,48149371,48149083,48143071	Gene ID= ENSG00000104177.17 TPM= 8.5 Transcript Type= protein_coding
chr15	48175330	48176240	48175330	48176240	+	transcript1145.chr15.nnic@NA	transcript1145.chr15.nnic	NA	48175330	48176240	Gene ID= novel_gene_chr15_1146 TPM= 2.12 Transcript Type= NA
chr15	48331423	48343373	48331423	48343373	+	ENST00000331200.7@DUT	ENST00000331200.7	protein_coding	48331423,48332268,48334417,48336046,48341289,48341515,48342022	48331795,48332406,48334508,48336090,48341363,48341585,48343373	Gene ID= ENSG00000128951.13 TPM= 7.44 Transcript Type= protein_coding
chr15	48331473	48342395	48331473	48342395	+	ENST00000558978.5@DUT	ENST00000558978.5	protein_coding	48331473,48332268,48334417,48336046,48341289,48341463,48342022	48331795,48332406,48334508,48336090,48341363,48341585,48342395	Gene ID= ENSG00000128951.13 TPM= 1.06 Transcript Type= nonsense_mediated_decay
chr15	48408306	48645849	48408306	48645849	-	ENST00000316623.9@FBN1	ENST00000316623.9	protein_coding	48645575,48644606,48613010,48610728,48600139,48596283,48537611,48534080,48526130,48520659,48516183,48515387,48513549,48510044,48508582,48505025,48503787,48498985,48497266,48496100,48495469,48495123,48494204,48492461,48489851,48488368,48488113,48487312,48487075,48485374,48483818,48481655,48474528,48474255,48472551,48470634,48468412,48467938,48465790,48465568,48463899,48463082,48460246,48456637,48452562,48448768,48446706,48445376,48444541,48441721,48437768,48437322,48436961,48434594,48432866,48430671,48428346,48427567,48425739,48425369,48421952,48421558,48420687,48415536,48412569,48408306	48645849,48644950,48613092,48610826,48600234,48596378,48537808,48534205,48526255,48520817,48516362,48515527,48513668,48510169,48508704,48505147,48503939,48499038,48497391,48496225,48495588,48495260,48494254,48492586,48490078,48488493,48488241,48487437,48487200,48485496,48483943,48481780,48474650,48474377,48472676,48470756,48468534,48468102,48465858,48465693,48464021,48463240,48460317,48456762,48452684,48448893,48446822,48445504,48444660,48441846,48437917,48437387,48437077,48434713,48432988,48430802,48428471,48427773,48425864,48425491,48422068,48421686,48420806,48415767,48412743,48411379	Gene ID= ENSG00000166147.13 TPM= 1.06 Transcript Type= protein_coding
chr15	48737935	48811141	48737935	48811141	-	ENST00000380950.6@CEP152	ENST00000380950.6	protein_coding	48810961,48805563,48797948,48797661,48797301,48796010,48793321,48791237,48788801,48783973,48782139,48781196,48772487,48768956,48768219,48767335,48767060,48762391,48760135,48755903,48752349,48748443,48744896,48744240,48741947,48741601,48737935	48811141,48805656,48798051,48797730,48797579,48796160,48793461,48791376,48789001,48784120,48782230,48781359,48772691,48769081,48768328,48767463,48767192,48762672,48760266,48756553,48752469,48748610,48744992,48744343,48742100,48741704,48739288	Gene ID= ENSG00000103995.13 TPM= 1.06 Transcript Type= protein_coding
chr15	48877886	48880183	48877886	48880183	+	ENST00000530028.2@EID1	ENST00000530028.2	protein_coding	48877886	48880183	Gene ID= ENSG00000255302.4 TPM= 13.81 Transcript Type= protein_coding
chr15	48988643	49046449	48988643	49046449	-	transcript1181.chr15.nnic@SECISBP2L	transcript1181.chr15.nnic	protein_coding	49046276,49037591,49035334,49032965,49028453,49028144,49027365,49019418,49017548,49016848,49016560,49012648,49011731,49009216,49000877,48999833,48996367,48991433,48988643	49046449,49037769,49035658,49033100,49028682,49028168,49027480,49019552,49017628,49017015,49016701,49012817,49011863,49009378,49001097,48999987,48996586,48992926,48989254	Gene ID= ENSG00000138593.8 TPM= 2.12 Transcript Type= NA
chr15	48988638	49046563	48988638	49046563	-	ENST00000559471.5@SECISBP2L	ENST00000559471.5	protein_coding	49046276,49037591,49035334,49032965,49028453,49028144,49027365,49019418,49017548,49016848,49016560,49012648,49011731,49009216,49000877,48999833,48996367,48988638	49046563,49037769,49035658,49033100,49028682,49028168,49027480,49019552,49017628,49017015,49016701,49012817,49011863,49009378,49001097,48999987,48996586,48992926	Gene ID= ENSG00000138593.8 TPM= 5.31 Transcript Type= protein_coding
chr15	49122728	49155652	49122728	49155652	-	ENST00000388901.9@COPS2	ENST00000388901.9	protein_coding	49155525,49144965,49144227,49139528,49137348,49137150,49134340,49133930,49133759,49130719,49129477,49128702,49122728	49155652,49145078,49144304,49139653,49137437,49137227,49134514,49134108,49133811,49130816,49129559,49128760,49128094	Gene ID= ENSG00000166200.14 TPM= 2.12 Transcript Type= protein_coding
chr15	49127350	49155661	49127350	49155661	-	ENST00000299259.10@COPS2	ENST00000299259.10	protein_coding	49155525,49144965,49144227,49139528,49137348,49137150,49134340,49133930,49133759,49130719,49129477,49128702,49127350	49155661,49145078,49144304,49139653,49137458,49137227,49134514,49134108,49133811,49130816,49129559,49128760,49128094	Gene ID= ENSG00000166200.14 TPM= 15.4 Transcript Type= protein_coding
chr15	49127350	49155596	49127350	49155596	-	transcript1193.chr15.nnic@COPS2	transcript1193.chr15.nnic	protein_coding	49155525,49144965,49144227,49139528,49137348,49137150,49134484,49133930,49133759,49130719,49129477,49128702,49127350	49155596,49145078,49144304,49139653,49137458,49137227,49134514,49134108,49133811,49130816,49129559,49128760,49128094	Gene ID= ENSG00000166200.14 TPM= 2.66 Transcript Type= NA
chr15	49155774	49329685	49155774	49329685	+	transcript1199.chr15.nic@GALK2	transcript1199.chr15.nic	protein_coding	49155774,49161740,49201162,49217190,49235851,49239221,49281987,49283566,49292327,49319604,49327952	49156016,49161861,49201250,49217313,49235941,49239367,49282085,49283718,49292537,49319805,49329685	Gene ID= ENSG00000156958.14 TPM= 2.12 Transcript Type= NA
chr15	49155765	49331882	49155765	49331882	+	ENST00000327171.7@GALK2	ENST00000327171.7	protein_coding	49155765,49201162,49217190,49235851,49239221,49281987,49283566,49292327,49319604,49327952	49156016,49201250,49217313,49235941,49239367,49282085,49283718,49292537,49319805,49331882	Gene ID= ENSG00000156958.14 TPM= 10.62 Transcript Type= protein_coding
chr15	49170016	49328518	49170016	49328518	+	ENST00000560031.5@GALK2	ENST00000560031.5	protein_coding	49170016,49201162,49217190,49235851,49239221,49281987,49283566,49292327,49319604,49327952	49170375,49201250,49217313,49235941,49239367,49282085,49283718,49292537,49319805,49328518	Gene ID= ENSG00000156958.14 TPM= 1.06 Transcript Type= protein_coding
chr15	49155769	49328514	49155769	49328514	+	transcript1207.chr15.nic@GALK2	transcript1207.chr15.nic	protein_coding	49155769,49201162,49217190,49235851,49239221,49283566,49292327,49319604,49327952	49156016,49201250,49217313,49235941,49239367,49283718,49292537,49319805,49328514	Gene ID= ENSG00000156958.14 TPM= 2.12 Transcript Type= NA
chr15	49576136	49620855	49576136	49620855	-	transcript1218.chr15.nic@FAM227B	transcript1218.chr15.nic	protein_coding	49620631,49615121,49611215,49589776,49588016,49577629,49576136	49620855,49615243,49611268,49590007,49588083,49577664,49576845	Gene ID= ENSG00000166262.15 TPM= 2.12 Transcript Type= NA
chr15	49621044	49656227	49621044	49656227	+	transcript1225.chr15.nnic@DTWD1	transcript1225.chr15.nnic	protein_coding	49621044,49625113,49632159,49634536,49643331,49653878	49621122,49625431,49632302,49634794,49644519,49656227	Gene ID= ENSG00000104047.14 TPM= 3.19 Transcript Type= NA
chr15	49621030	49636926	49621030	49636926	+	transcript1235.chr15.nic@DTWD1	transcript1235.chr15.nic	protein_coding	49621030,49625113,49632159,49634536	49621122,49625431,49632302,49636926	Gene ID= ENSG00000104047.14 TPM= 2.12 Transcript Type= NA
chr15	49621065	49643610	49621065	49643610	+	ENST00000558653.5@DTWD1	ENST00000558653.5	protein_coding	49621065,49625113,49632159,49634536,49643331	49621193,49625431,49632302,49634794,49643610	Gene ID= ENSG00000104047.14 TPM= 1.06 Transcript Type= protein_coding
chr15	50241947	50253305	50241947	50253305	-	ENST00000559816.1@HDC	ENST00000559816.1	protein_coding	50252612,50252430,50248245,50243143,50241947	50253305,50252520,50248343,50243244,50243006	Gene ID= ENSG00000140287.10 TPM= 2.12 Transcript Type= retained_intron
chr15	50275392	50355408	50275392	50355408	-	ENST00000380877.7@GABPB1	ENST00000380877.7	protein_coding	50354985,50309691,50303966,50302929,50301257,50300789,50289483,50286068,50275392	50355408,50309798,50304133,50303123,50301368,50300902,50289668,50286183,50278784	Gene ID= ENSG00000104064.16 TPM= 1.06 Transcript Type= protein_coding
chr15	50277263	50355153	50277263	50355153	-	ENST00000220429.12@GABPB1	ENST00000220429.12	protein_coding	50354985,50309691,50303966,50302929,50301221,50300789,50289483,50286068,50277263	50355153,50309798,50304133,50303123,50301368,50300902,50289668,50286183,50278784	Gene ID= ENSG00000104064.16 TPM= 5.31 Transcript Type= protein_coding
chr15	50285880	50355153	50285880	50355153	-	ENST00000429662.6@GABPB1	ENST00000429662.6	protein_coding	50354985,50309691,50303966,50302929,50301221,50300789,50289483,50285880	50355153,50309798,50304133,50303123,50301368,50300902,50289668,50286183	Gene ID= ENSG00000104064.16 TPM= 1.06 Transcript Type= protein_coding
chr15	50353760	50354881	50353760	50354881	-	transcript1252.chr15.nnic@NA	transcript1252.chr15.nnic	NA	50353760	50354881	Gene ID= novel_gene_chr15_1253 TPM= 10.62 Transcript Type= NA
chr15	50354967	50356324	50354967	50356324	+	transcript1250.chr15.nnic@NA	transcript1250.chr15.nnic	NA	50354967	50356324	Gene ID= novel_gene_chr15_1251 TPM= 2.12 Transcript Type= NA
chr15	50424382	50514419	50424382	50514419	+	ENST00000396444.7@USP8	ENST00000396444.7	protein_coding	50424382,50439009,50441349,50449400,50459000,50462280,50465047,50471633,50476849,50477276,50481481,50484275,50489801,50490263,50492701,50494070,50495848,50497089,50498596,50498903	50424654,50439177,50441493,50449485,50459162,50462322,50465191,50471795,50476993,50477499,50482065,50484361,50489881,50490525,50492913,50494280,50496084,50497231,50498728,50514419	Gene ID= ENSG00000138592.13 TPM= 2.66 Transcript Type= protein_coding
chr15	50424375	50499776	50424375	50499776	+	transcript1259.chr15.nic@USP8	transcript1259.chr15.nic	protein_coding	50424375,50439009,50441349,50449400,50459000,50462280,50465047,50471633,50476849,50477276,50481481,50489801,50490263,50492701,50494070,50495848,50497089,50498596,50498903	50424514,50439177,50441493,50449485,50459162,50462322,50465191,50471795,50476993,50477499,50482065,50489881,50490525,50492913,50494280,50496084,50497231,50498728,50499776	Gene ID= ENSG00000138592.13 TPM= 3.72 Transcript Type= NA
chr15	50424382	50499776	50424382	50499776	+	transcript1261.chr15.nic@USP8	transcript1261.chr15.nic	protein_coding	50424382,50439009,50441349,50449400,50459000,50462280,50465047,50471633,50476849,50477276,50481481,50489801,50490263,50492701,50494070,50495848,50497089,50498596,50498903	50424654,50439177,50441493,50449485,50459162,50462322,50465191,50471795,50476993,50477499,50482065,50489881,50490525,50492913,50494280,50496084,50497231,50498728,50499776	Gene ID= ENSG00000138592.13 TPM= 3.19 Transcript Type= NA
chr15	50424405	50481823	50424405	50481823	+	transcript1267.chr15.nic@USP8	transcript1267.chr15.nic	protein_coding	50424405,50432338,50439009,50441349,50449400,50459000,50462280,50465047,50471633,50476849,50477276,50481481	50424514,50432499,50439177,50441493,50449485,50459162,50462322,50465191,50471795,50476993,50477499,50481823	Gene ID= ENSG00000138592.13 TPM= 3.19 Transcript Type= NA
chr15	50424382	50499776	50424382	50499776	+	ENST00000307179.8@USP8	ENST00000307179.8	protein_coding	50424382,50439009,50441349,50449400,50459000,50462280,50465047,50471633,50476849,50477276,50481481,50484275,50489801,50490263,50492701,50494070,50495848,50497089,50498596,50498903	50424514,50439177,50441493,50449485,50459162,50462322,50465191,50471795,50476993,50477499,50482065,50484361,50489881,50490525,50492913,50494280,50496084,50497231,50498728,50499776	Gene ID= ENSG00000138592.13 TPM= 10.62 Transcript Type= protein_coding
chr15	50557158	50686815	50557158	50686815	-	ENST00000313478.11@TRPM7	ENST00000313478.11	protein_coding	50686531,50662967,50657781,50648687,50643340,50639424,50637422,50634382,50632869,50631417,50628149,50624166,50619745,50614123,50613707,50612549,50611093,50609806,50609581,50607200,50604866,50599122,50596255,50594429,50593617,50591911,50589592,50586392,50583089,50580874,50578639,50575869,50575724,50574852,50574637,50574274,50570104,50569887,50557158	50686815,50663046,50657819,50648885,50643553,50639548,50637593,50634556,50632992,50631489,50628249,50624300,50619798,50614263,50613841,50612829,50611321,50609961,50609724,50607328,50605144,50599296,50596381,50594613,50593749,50592626,50589656,50586488,50583159,50580908,50578664,50575919,50575789,50575135,50574719,50574479,50570155,50569993,50561808	Gene ID= ENSG00000092439.13 TPM= 4.25 Transcript Type= protein_coding
chr15	50704531	50765697	50704531	50765697	-	transcript1285.chr15.nnic@SPPL2A	transcript1285.chr15.nnic	protein_coding	50765468,50749636,50748688,50748113,50747495,50739680,50736644,50736101,50732603,50730965,50726321,50725221,50722124,50719940,50707524,50704531	50765697,50749746,50748870,50748202,50747628,50739828,50736740,50736202,50732684,50731039,50726377,50725323,50722201,50720100,50707874,50706124	Gene ID= ENSG00000138600.9 TPM= 5.31 Transcript Type= NA
chr15	50704531	50765685	50704531	50765685	-	transcript1286.chr15.nnic@SPPL2A	transcript1286.chr15.nnic	protein_coding	50765468,50749636,50748688,50748113,50747495,50739680,50736644,50736101,50732603,50730965,50726321,50725221,50722124,50719940,50707416,50704531	50765685,50749746,50748870,50748202,50747628,50739828,50736740,50736202,50732684,50731039,50726377,50725323,50722201,50720100,50707874,50706126	Gene ID= ENSG00000138600.9 TPM= 2.12 Transcript Type= NA
chr15	50707577	50765721	50707577	50765721	-	transcript1288.chr15.nic@SPPL2A	transcript1288.chr15.nic	protein_coding	50765468,50749636,50748688,50748113,50747495,50739680,50736644,50736101,50732603,50730965,50726321,50726073,50725221,50722124,50719940,50707577	50765721,50749746,50748870,50748202,50747628,50739828,50736740,50736202,50732684,50731039,50726377,50726126,50725323,50722201,50720100,50707874	Gene ID= ENSG00000138600.9 TPM= 5.31 Transcript Type= NA
chr15	50702266	50765808	50702266	50765808	-	ENST00000261854.9@SPPL2A	ENST00000261854.9	protein_coding	50765468,50749636,50748688,50748113,50747495,50739680,50736644,50736101,50732603,50730965,50726321,50725221,50722124,50719940,50702266	50765808,50749746,50748870,50748202,50747628,50739828,50736740,50736202,50732684,50731039,50726377,50725323,50722201,50720100,50707874	Gene ID= ENSG00000138600.9 TPM= 45.67 Transcript Type= protein_coding
chr15	50908673	51005900	50908673	51005900	+	ENST00000261842.9@AP4E1	ENST00000261842.9	protein_coding	50908673,50912078,50915448,50923931,50925098,50929009,50930805,50934624,50941442,50941666,50948020,50949826,50950051,50958492,50968263,50984022,50993370,50997326,50999072,51001026,51002502	50908928,50912149,50915571,50924004,50925219,50929168,50930971,50934697,50941564,50941775,50948159,50949938,50950169,50958794,50968377,50984145,50993625,50997883,50999262,51001183,51005900	Gene ID= ENSG00000081014.10 TPM= 6.37 Transcript Type= protein_coding
chr15	50935484	50939436	50935484	50939436	+	transcript1300.chr15.nnic@NA	transcript1300.chr15.nnic	NA	50935484	50939436	Gene ID= novel_gene_chr15_1301 TPM= 2.12 Transcript Type= NA
chr15	51056601	51094805	51056601	51094805	-	transcript1302.chr15.nnic@TNFAIP8L3	transcript1302.chr15.nnic	protein_coding	51094544,51085047,51056601	51094805,51085136,51058443	Gene ID= ENSG00000183578.6 TPM= 7.44 Transcript Type= NA
chr15	51381770	51382750	51381770	51382750	-	transcript1305.chr15.nnic@NA	transcript1305.chr15.nnic	NA	51381770	51382750	Gene ID= novel_gene_chr15_1306 TPM= 2.12 Transcript Type= NA
chr15	51387425	51388636	51387425	51388636	+	transcript1307.chr15.nnic@NA	transcript1307.chr15.nnic	NA	51387425	51388636	Gene ID= novel_gene_chr15_1308 TPM= 2.12 Transcript Type= NA
chr15	51447791	51450673	51447791	51450673	-	ENST00000559769.1@DMXL2	ENST00000559769.1	protein_coding	51450129,51447791	51450673,51449193	Gene ID= ENSG00000104093.13 TPM= 2.12 Transcript Type= retained_intron
chr15	51723069	51738148	51723069	51738148	-	transcript1310.chr15.nnic@LYSMD2	transcript1310.chr15.nnic	protein_coding	51737350,51724790,51723069	51738148,51724991,51723649	Gene ID= ENSG00000140280.13 TPM= 3.19 Transcript Type= NA
chr15	51723011	51738137	51723011	51738137	-	ENST00000267838.6@LYSMD2	ENST00000267838.6	protein_coding	51737350,51724790,51723011	51738137,51725121,51723649	Gene ID= ENSG00000140280.13 TPM= 20.18 Transcript Type= protein_coding
chr15	51751561	51816368	51751561	51816368	+	ENST00000249700.8@TMOD2	ENST00000249700.8	protein_coding	51751561,51766373,51768262,51773712,51776932,51781044,51782721,51798197,51806377,51808420	51751712,51766567,51768418,51773834,51777018,51781174,51782828,51798340,51806521,51816368	Gene ID= ENSG00000128872.9 TPM= 1.06 Transcript Type= protein_coding
chr15	51829630	51915725	51829630	51915725	+	ENST00000308580.11@TMOD3	ENST00000308580.11	protein_coding	51829630,51862811,51869217,51887589,51889056,51893815,51896419,51900155,51901892,51908776	51829836,51863010,51869373,51887711,51889145,51893945,51896526,51900298,51902036,51915725	Gene ID= ENSG00000138594.13 TPM= 2.12 Transcript Type= protein_coding
chr15	51924392	51931308	51924392	51931308	+	ENST00000558666.1@TMOD3	ENST00000558666.1	protein_coding	51924392,51931031	51924578,51931308	Gene ID= ENSG00000138594.13 TPM= 2.12 Transcript Type= processed_transcript
chr15	51938025	51971806	51938025	51971806	-	ENST00000299601.9@LEO1	ENST00000299601.9	protein_coding	51971688,51965749,51962389,51960639,51959899,51958742,51954481,51953129,51951844,51949808,51947292,51938025	51971806,51966504,51962493,51960733,51960044,51958826,51954575,51953263,51951979,51949994,51947389,51938260	Gene ID= ENSG00000166477.12 TPM= 19.12 Transcript Type= protein_coding
chr15	51943107	51945277	51943107	51945277	+	transcript1329.chr15.nnic@NA	transcript1329.chr15.nnic	NA	51943107	51945277	Gene ID= novel_gene_chr15_1330 TPM= 2.12 Transcript Type= NA
chr15	52019201	52067372	52019201	52067372	+	ENST00000261845.6@MAPK6	ENST00000261845.6	protein_coding	52019201,52045830,52049993,52058633,52061299,52063902	52019376,52047015,52050137,52058797,52061500,52067372	Gene ID= ENSG00000069956.11 TPM= 2.12 Transcript Type= protein_coding
chr15	52122206	52180001	52122206	52180001	-	ENST00000358784.11@GNB5	ENST00000358784.11	protein_coding	52179768,52153940,52149884,52147459,52141140,52135613,52133378,52128196,52125948,52124473,52122206	52180001,52154076,52149925,52147535,52141272,52135756,52133469,52128244,52126044,52124639,52122768	Gene ID= ENSG00000069966.18 TPM= 9.56 Transcript Type= protein_coding
chr15	52547045	52569239	52547045	52569239	-	ENST00000566423.5@ARPP19	ENST00000566423.5	protein_coding	52569116,52568848,52557100,52547045	52569239,52568902,52557222,52552104	Gene ID= ENSG00000128989.10 TPM= 10.62 Transcript Type= protein_coding
chr15	52547244	52569164	52547244	52569164	-	ENST00000249822.8@ARPP19	ENST00000249822.8	protein_coding	52568848,52557100,52547244	52569164,52557222,52552104	Gene ID= ENSG00000128989.10 TPM= 14.87 Transcript Type= protein_coding
chr15	52549527	52568832	52549527	52568832	-	ENST00000561650.5@ARPP19	ENST00000561650.5	protein_coding	52568289,52557100,52549527	52568832,52557222,52552104	Gene ID= ENSG00000128989.10 TPM= 1.06 Transcript Type= protein_coding
chr15	52551594	52569167	52551594	52569167	-	ENST00000567669.5@ARPP19	ENST00000567669.5	protein_coding	52569112,52568848,52557100,52551594	52569167,52568902,52557222,52552104	Gene ID= ENSG00000128989.10 TPM= 3.19 Transcript Type= protein_coding
chr15	55180806	55197067	55180806	55197067	-	ENST00000260443.8@RSL24D1	ENST00000260443.8	protein_coding	55196810,55192720,55190975,55185362,55183315,55180806	55197067,55192833,55191047,55185425,55183400,55182225	Gene ID= ENSG00000137876.9 TPM= 64.79 Transcript Type= protein_coding
chr15	55202969	55289815	55202969	55289815	-	ENST00000336787.5@RAB27A	ENST00000336787.5	protein_coding	55289716,55270165,55234782,55230401,55228609,55223889,55202969	55289815,55270284,55234956,55230486,55228712,55224012,55205705	Gene ID= ENSG00000069974.15 TPM= 1.06 Transcript Type= protein_coding
chr15	55316429	55316594	55316429	55316594	+	transcript1401.chr15.nnic@NA	transcript1401.chr15.nnic	NA	55316429	55316594	Gene ID= novel_gene_chr15_1402 TPM= 2.12 Transcript Type= NA
chr15	55317187	55319161	55317187	55319161	-	transcript1400.chr15.nnic@PIGBOS1	transcript1400.chr15.nnic	protein_coding	55318931,55317187	55319161,55317867	Gene ID= ENSG00000225973.3 TPM= 6.37 Transcript Type= NA
chr15	55318960	55355648	55318960	55355648	+	ENST00000164305.9@PIGB	ENST00000164305.9	protein_coding	55318960,55320275,55321273,55327531,55329724,55333867,55339267,55340612,55341738,55350699,55354798,55355286	55319413,55320410,55321390,55327635,55329854,55334007,55339318,55340823,55341802,55350912,55354978,55355648	Gene ID= ENSG00000069943.9 TPM= 2.12 Transcript Type= protein_coding
chr15	55355250	55408510	55355250	55408510	-	ENST00000310958.10@CCPG1	ENST00000310958.10	protein_coding	55408221,55389365,55385600,55378300,55376949,55371793,55365188,55355250	55408510,55389433,55385714,55378376,55377150,55372044,55365309,55360944	Gene ID= ENSG00000260916.7 TPM= 23.37 Transcript Type= protein_coding
chr15	55355239	55408259	55355239	55408259	-	ENST00000442196.7@CCPG1	ENST00000442196.7	protein_coding	55408221,55389365,55385600,55378300,55376949,55371793,55365188,55359539,55355239	55408259,55389433,55385714,55378376,55377150,55372044,55365309,55360944,55356409	Gene ID= ENSG00000260916.7 TPM= 4.25 Transcript Type= protein_coding
chr15	55355645	55408306	55355645	55408306	-	ENST00000425574.7@CCPG1	ENST00000425574.7	protein_coding	55408221,55389365,55385600,55378300,55376949,55371793,55365188,55360840,55359539,55355645	55408306,55389433,55385714,55378376,55377150,55372044,55365309,55360944,55359690,55356409	Gene ID= ENSG00000260916.7 TPM= 1.06 Transcript Type= protein_coding
chr15	55408548	55418712	55408548	55418712	+	ENST00000569691.1@C15orf65	ENST00000569691.1	protein_coding	55408548,55418223	55408786,55418712	Gene ID= ENSG00000261652.2 TPM= 2.12 Transcript Type= protein_coding
chr15	55826922	55993746	55826922	55993746	-	ENST00000435532.7@NEDD4	ENST00000435532.7	protein_coding	55993511,55966473,55951511,55951376,55924646,55873958,55872415,55869579,55862913,55860661,55860407,55856131,55852424,55850542,55848806,55848521,55848372,55846969,55841934,55840606,55840447,55838509,55838107,55837789,55834227,55834038,55833008,55830514,55826922	55993746,55966546,55951589,55951414,55924699,55874008,55872476,55869681,55863079,55860778,55860574,55856196,55852543,55850742,55848886,55848575,55848430,55847034,55842163,55840727,55840517,55838604,55838180,55837849,55834286,55834145,55833104,55830586,55829999	Gene ID= ENSG00000069869.15 TPM= 2.12 Transcript Type= protein_coding
chr15	56090532	56091370	56090532	56091370	-	transcript1412.chr15.nnic@NA	transcript1412.chr15.nnic	NA	56090532	56091370	Gene ID= novel_gene_chr15_1413 TPM= 3.19 Transcript Type= NA
chr15	56428731	56465137	56428731	56465137	-	ENST00000260453.3@MNS1	ENST00000260453.3	protein_coding	56464970,56464026,56456394,56446841,56444444,56443638,56443430,56434138,56431373,56428731	56465137,56464247,56456521,56446943,56444673,56443854,56443537,56434395,56431498,56429193	Gene ID= ENSG00000138587.5 TPM= 2.12 Transcript Type= protein_coding
chr15	56655401	56659196	56655401	56659196	+	transcript1424.chr15.nnic@NA	transcript1424.chr15.nnic	NA	56655401	56659196	Gene ID= novel_gene_chr15_1425 TPM= 8.5 Transcript Type= NA
chr15	56916726	56918493	56916726	56918493	-	ENST00000560587.1@ZNF280D	ENST00000560587.1	protein_coding	56917540,56916726	56918493,56917212	Gene ID= ENSG00000137871.19 TPM= 5.31 Transcript Type= processed_transcript
chr15	56918675	57282476	56918675	57282476	+	transcript1433.chr15.nic@TCF12	transcript1433.chr15.nic	protein_coding	56918675,56919892,56921026,57063750,57091789,57166402,57192158,57197773,57231152,57232291,57232712,57234043,57243472,57251350,57253262,57262094,57263112,57273030,57282445	56918906,56919988,56921098,57063823,57091891,57166466,57192293,57197825,57231257,57232430,57232856,57234107,57243550,57251423,57253468,57262208,57263274,57273262,57282476	Gene ID= ENSG00000140262.17 TPM= 3.19 Transcript Type= NA
chr15	56953880	56958105	56953880	56958105	-	transcript1441.chr15.nnic@NA	transcript1441.chr15.nnic	NA	56953880	56958105	Gene ID= novel_gene_chr15_1442 TPM= 3.19 Transcript Type= NA
chr15	57223645	57225397	57223645	57225397	-	transcript1443.chr15.nnic@NA	transcript1443.chr15.nnic	NA	57223645	57225397	Gene ID= novel_gene_chr15_1444 TPM= 7.44 Transcript Type= NA
chr15	57290019	57293665	57290019	57293665	-	transcript1445.chr15.nnic@NA	transcript1445.chr15.nnic	NA	57290019	57293665	Gene ID= novel_gene_chr15_1446 TPM= 2.12 Transcript Type= NA
chr15	57300365	57307761	57300365	57307761	+	ENST00000501726.1@LINC00926	ENST00000501726.1	lincRNA	57300365,57305319,57307542	57300924,57307068,57307761	Gene ID= ENSG00000247982.6 TPM= 1.06 Transcript Type= lincRNA
chr15	57376458	57518429	57376458	57518429	+	transcript1452.chr15.nic@CGNL1	transcript1452.chr15.nic	protein_coding	57376458,57437985,57440377,57442373,57451500,57452141,57453683,57461680,57516780,57518393	57376567,57439601,57440471,57442478,57451601,57452289,57453818,57461892,57516986,57518429	Gene ID= ENSG00000128849.10 TPM= 3.19 Transcript Type= NA
chr15	57591941	57685364	57591941	57685364	+	ENST00000267853.9@MYZAP	ENST00000267853.9	protein_coding	57591941,57604269,57618033,57621608,57625779,57629702,57632434,57633613,57637695,57639440,57661450,57674968,57684402	57592109,57604355,57618188,57621700,57625892,57629854,57632559,57633741,57637774,57639545,57661533,57675068,57685364	Gene ID= ENSG00000263155.5 TPM= 1603.08 Transcript Type= protein_coding
chr15	57592033	57685360	57592033	57685360	+	ENST00000380565.8@MYZAP	ENST00000380565.8	protein_coding	57592033,57604269,57618033,57621608,57625779,57629702,57632434,57633613,57637695,57639440,57674968,57684402	57592109,57604355,57618188,57621700,57625892,57629854,57632559,57633741,57637774,57639545,57675068,57685360	Gene ID= ENSG00000263155.5 TPM= 8.21 Transcript Type= protein_coding
chr15	57616824	57620051	57616824	57620051	-	transcript1501.chr15.nnic@NA	transcript1501.chr15.nnic	NA	57616824	57620051	Gene ID= novel_gene_chr15_1502 TPM= 23.37 Transcript Type= NA
chr15	57706714	57724742	57706714	57724742	+	transcript1511.chr15.nnic@POLR2M	transcript1511.chr15.nnic	protein_coding	57706714,57708714,57711984,57714536,57724712	57706955,57709358,57712188,57716255,57724742	Gene ID= ENSG00000255529.7 TPM= 10.62 Transcript Type= NA
chr15	57706695	57714882	57706695	57714882	+	ENST00000494490.1@POLR2M	ENST00000494490.1	protein_coding	57706695,57708714,57711984,57714536	57707145,57709358,57712188,57714882	Gene ID= ENSG00000255529.7 TPM= 1.06 Transcript Type= protein_coding
chr15	57706977	57717554	57706977	57717554	+	transcript1520.chr15.nic@POLR2M	transcript1520.chr15.nic	protein_coding	57706977,57708714,57711984,57714536	57707141,57709358,57712188,57717554	Gene ID= ENSG00000255529.7 TPM= 7.44 Transcript Type= NA
chr15	57706725	57717554	57706725	57717554	+	ENST00000380557.4@POLR2M	ENST00000380557.4	protein_coding	57706725,57709185,57711984,57714536	57706955,57709358,57712188,57717554	Gene ID= ENSG00000255529.7 TPM= 2.12 Transcript Type= protein_coding
chr15	57953431	58279249	57953431	58279249	-	transcript1523.chr15.nnic@ALDH1A2	transcript1523.chr15.nnic	protein_coding	58279174,58107319,58014177,58013858,58010649,57995078,57992945,57992705,57965725,57963885,57962012,57961137,57960770,57953431	58279249,58107468,58014281,58013998,58010778,57995139,57993073,57992818,57965827,57964069,57962176,57961294,57960844,57955269	Gene ID= ENSG00000128918.14 TPM= 3.72 Transcript Type= NA
chr15	57953424	58066418	57953424	58066418	-	ENST00000249750.8@ALDH1A2	ENST00000249750.8	protein_coding	58065534,58014177,58013858,58010649,57995078,57992945,57992705,57965725,57963885,57962012,57961137,57960770,57953424	58066418,58014281,58013998,58010778,57995139,57993073,57992818,57965827,57964069,57962176,57961294,57960844,57955269	Gene ID= ENSG00000128918.14 TPM= 6.9 Transcript Type= protein_coding
chr15	58138196	58185911	58138196	58185911	+	ENST00000219919.8@AQP9	ENST00000219919.8	protein_coding	58138196,58166673,58173068,58174918,58179128,58183961	58138676,58166799,58173205,58175036,58179345,58185911	Gene ID= ENSG00000103569.9 TPM= 2.12 Transcript Type= protein_coding
chr15	58587088	58589709	58587088	58589709	-	transcript1530.chr15.nnic@NA	transcript1530.chr15.nnic	NA	58587088	58589709	Gene ID= novel_gene_chr15_1531 TPM= 3.19 Transcript Type= NA
chr15	58588807	58749978	58588807	58749978	-	ENST00000260408.7@ADAM10	ENST00000260408.7	protein_coding	58749480,58717577,58682196,58679124,58665097,58646055,58643886,58640777,58633196,58627700,58621471,58611808,58610999,58610297,58599598,58588807	58749978,58717727,58682314,58679282,58665197,58646204,58643978,58640960,58633359,58627883,58621621,58611991,58611107,58610517,58599724,58597641	Gene ID= ENSG00000137845.14 TPM= 31.86 Transcript Type= protein_coding
chr15	58654092	58656046	58654092	58656046	-	transcript1545.chr15.nnic@NA	transcript1545.chr15.nnic	NA	58654092	58656046	Gene ID= novel_gene_chr15_1546 TPM= 2.12 Transcript Type= NA
chr15	58771194	58854591	58771194	58854591	+	transcript1549.chr15.nnic@MINDY2	transcript1549.chr15.nnic	protein_coding	58771194,58787906,58802313,58810230,58821717,58823183,58831774,58847297,58851771,58854482	58772235,58787963,58802377,58810388,58821819,58823280,58831916,58847470,58851965,58854591	Gene ID= ENSG00000128923.10 TPM= 2.12 Transcript Type= NA
chr15	58771286	58854591	58771286	58854591	+	ENST00000560289.5@MINDY2	ENST00000560289.5	protein_coding	58771286,58787906,58802313,58810230,58821717,58831774,58847297,58851771,58854482	58772235,58787963,58802377,58810286,58821823,58831916,58847470,58851965,58854591	Gene ID= ENSG00000128923.10 TPM= 1.06 Transcript Type= nonsense_mediated_decay
chr15	58826227	58826742	58826227	58826742	-	transcript1558.chr15.nnic@NA	transcript1558.chr15.nnic	NA	58826227	58826742	Gene ID= novel_gene_chr15_1559 TPM= 3.19 Transcript Type= NA
chr15	58893296	58933677	58893296	58933677	-	transcript1570.chr15.nic@SLTM	transcript1570.chr15.nic	protein_coding	58933404,58932356,58916935,58913499,58912563,58901260,58899469,58898803,58897115,58894433,58894090,58893821,58893296	58933677,58932443,58916999,58913696,58912610,58901287,58899937,58898852,58897233,58894582,58894193,58893987,58893364	Gene ID= ENSG00000137776.16 TPM= 2.12 Transcript Type= NA
chr15	58893926	58933676	58893926	58933676	-	transcript1575.chr15.nic@SLTM	transcript1575.chr15.nic	protein_coding	58933404,58932356,58916935,58913499,58912563,58901260,58899469,58898803,58897115,58894433,58894090,58893926	58933676,58932443,58916999,58913696,58912610,58901287,58899883,58898852,58897233,58894582,58894193,58893987	Gene ID= ENSG00000137776.16 TPM= 4.78 Transcript Type= NA
chr15	58894158	58933592	58894158	58933592	-	transcript1585.chr15.nnic@SLTM	transcript1585.chr15.nnic	protein_coding	58933404,58932356,58916935,58913499,58912563,58901260,58899469,58898803,58897115,58894433,58894158	58933592,58932443,58917020,58913696,58912610,58901287,58899937,58898852,58897233,58894582,58894193	Gene ID= ENSG00000137776.16 TPM= 2.12 Transcript Type= NA
chr15	58879045	58933653	58879045	58933653	-	ENST00000380516.6@SLTM	ENST00000380516.6	protein_coding	58933404,58932356,58916935,58913499,58912563,58901260,58899469,58898803,58897115,58894433,58894090,58893821,58893279,58892897,58890281,58889430,58888385,58887226,58886975,58883626,58879045	58933653,58932443,58916999,58913696,58912610,58901287,58899937,58898852,58897233,58894582,58894193,58893987,58893364,58893060,58890461,58889554,58888555,58887540,58887119,58883786,58880107	Gene ID= ENSG00000137776.16 TPM= 2.12 Transcript Type= protein_coding
chr15	58894158	58933579	58894158	58933579	-	ENST00000249736.11@SLTM	ENST00000249736.11	protein_coding	58933404,58932356,58916935,58913499,58912563,58901260,58899469,58898803,58897115,58894433,58894158	58933579,58932443,58916999,58913696,58912610,58901287,58899883,58898852,58897233,58894582,58894193	Gene ID= ENSG00000137776.16 TPM= 2.12 Transcript Type= protein_coding
chr15	58910745	58911176	58910745	58911176	-	transcript1605.chr15.nnic@NA	transcript1605.chr15.nnic	NA	58910745	58911176	Gene ID= novel_gene_chr15_1606 TPM= 2.12 Transcript Type= NA
chr15	58915697	58915976	58915697	58915976	+	transcript1603.chr15.nnic@NA	transcript1603.chr15.nnic	NA	58915697	58915976	Gene ID= novel_gene_chr15_1604 TPM= 4.25 Transcript Type= NA
chr15	59132434	59372900	59132434	59372900	-	ENST00000288235.8@MYO1E	ENST00000288235.8	protein_coding	59372498,59272306,59261420,59256284,59236585,59231702,59227459,59224689,59223059,59217891,59214640,59214228,59210514,59208681,59205400,59202326,59195461,59188118,59178393,59174126,59173746,59171897,59163157,59161073,59158287,59153590,59138198,59132434	59372900,59272449,59261509,59256378,59236672,59231791,59227590,59224823,59223191,59218087,59214720,59214314,59210600,59208848,59205485,59202407,59195567,59188216,59178537,59174240,59173915,59172042,59163303,59161230,59158379,59153791,59138367,59137456	Gene ID= ENSG00000157483.8 TPM= 4.25 Transcript Type= protein_coding
chr15	59177011	59372849	59177011	59372849	-	transcript1611.chr15.nic@MYO1E	transcript1611.chr15.nic	protein_coding	59372498,59272306,59261420,59256284,59236585,59231702,59227459,59224689,59223059,59217891,59214640,59214228,59210514,59208681,59205400,59202326,59195461,59188118,59177011	59372849,59272449,59261509,59256378,59236672,59231791,59227590,59224823,59223191,59218087,59214720,59214314,59210600,59208848,59205485,59202407,59195567,59188216,59178537	Gene ID= ENSG00000157483.8 TPM= 3.19 Transcript Type= NA
chr15	59371437	59372869	59371437	59372869	-	transcript1612.chr15.nnic@NA	transcript1612.chr15.nnic	NA	59371437	59372869	Gene ID= novel_gene_chr15_1613 TPM= 4.25 Transcript Type= NA
chr15	59638062	59657538	59638062	59657538	-	ENST00000396060.6@GTF2A2	ENST00000396060.6	protein_coding	59657406,59652206,59650669,59642136,59638062	59657538,59652326,59650773,59642262,59639157	Gene ID= ENSG00000140307.10 TPM= 3.19 Transcript Type= protein_coding
chr15	59638859	59657497	59638859	59657497	-	ENST00000267869.8@GTF2A2	ENST00000267869.8	protein_coding	59657406,59642136,59638859	59657497,59642262,59639157	Gene ID= ENSG00000140307.10 TPM= 4.25 Transcript Type= processed_transcript
chr15	59638866	59657520	59638866	59657520	-	ENST00000396064.7@GTF2A2	ENST00000396064.7	protein_coding	59657406,59652206,59650669,59638866	59657520,59652326,59650773,59639157	Gene ID= ENSG00000140307.10 TPM= 2.12 Transcript Type= protein_coding
chr15	59659149	59689330	59659149	59689330	-	transcript1616.chr15.nic@BNIP2	transcript1616.chr15.nic	protein_coding	59689135,59682408,59680241,59679592,59677911,59672637,59671183,59669276,59668892,59668103,59659149	59689330,59682514,59680308,59679768,59678087,59672739,59671314,59669362,59668990,59668138,59664120	Gene ID= ENSG00000140299.11 TPM= 17.53 Transcript Type= NA
chr15	59659146	59689534	59659146	59689534	-	ENST00000267859.7@BNIP2	ENST00000267859.7	protein_coding	59689135,59682408,59680241,59679592,59677911,59672637,59671183,59669276,59668892,59659146	59689534,59682514,59680308,59679768,59678087,59672739,59671314,59669362,59668990,59664120	Gene ID= ENSG00000140299.11 TPM= 13.28 Transcript Type= protein_coding
chr15	59768352	59769146	59768352	59769146	+	ENST00000484430.1@RPS3AP6	ENST00000484430.1	processed_pseudogene	59768352	59769146	Gene ID= ENSG00000234797.5 TPM= 16.99 Transcript Type= processed_pseudogene
chr15	60347337	60398101	60347337	60398101	-	transcript1636.chr15.nic@ANXA2	transcript1636.chr15.nic	protein_coding	60397943,60386028,60364429,60360941,60357146,60355919,60354154,60352383,60351724,60351193,60349075,60347337	60398101,60386086,60364523,60361054,60357236,60355998,60354213,60352476,60351819,60351251,60349197,60347689	Gene ID= ENSG00000182718.16 TPM= 14.52 Transcript Type= NA
chr15	60347327	60398043	60347327	60398043	-	ENST00000451270.6@ANXA2	ENST00000451270.6	protein_coding	60397943,60386028,60382342,60364429,60360941,60357146,60355919,60354154,60352383,60351724,60351193,60349075,60347327	60398043,60386086,60382441,60364523,60361054,60357236,60355998,60354213,60352476,60351819,60351251,60349197,60347689	Gene ID= ENSG00000182718.16 TPM= 287.5 Transcript Type= protein_coding
chr15	60347342	60397986	60347342	60397986	-	ENST00000421017.6@ANXA2	ENST00000421017.6	protein_coding	60397943,60397258,60386028,60382342,60364429,60360941,60357146,60355919,60354154,60352383,60351724,60351193,60349075,60347342	60397986,60397338,60386086,60382441,60364523,60361054,60357236,60355998,60354213,60352476,60351819,60351251,60349197,60347689	Gene ID= ENSG00000182718.16 TPM= 36.83 Transcript Type= protein_coding
chr15	60419613	60479160	60419613	60479160	-	ENST00000558181.5@ICE2	ENST00000558181.5	protein_coding	60479003,60477937,60476063,60468061,60466594,60456657,60455326,60455003,60453603,60448848,60447970,60442416,60436143,60431934,60428429,60419613	60479160,60478069,60476167,60468162,60466713,60456794,60455442,60455162,60453784,60449841,60448145,60442545,60436227,60431984,60428687,60423762	Gene ID= ENSG00000128915.11 TPM= 3.19 Transcript Type= nonsense_mediated_decay
chr15	60419609	60479145	60419609	60479145	-	ENST00000261520.8@ICE2	ENST00000261520.8	protein_coding	60479003,60477937,60476063,60468061,60466594,60456657,60455326,60455003,60453603,60448848,60447970,60442416,60436143,60431934,60428429,60419609	60479145,60478069,60476167,60468322,60466713,60456794,60455442,60455162,60453784,60449841,60448145,60442545,60436227,60431984,60428687,60423762	Gene ID= ENSG00000128915.11 TPM= 4.25 Transcript Type= protein_coding
chr15	60451095	60479073	60451095	60479073	-	ENST00000561114.5@ICE2	ENST00000561114.5	protein_coding	60479003,60477937,60476063,60468061,60466594,60456657,60455326,60455003,60451095	60479073,60478069,60476167,60468322,60466713,60456794,60455442,60455162,60453784	Gene ID= ENSG00000128915.11 TPM= 1.06 Transcript Type= protein_coding
chr15	60940513	60943938	60940513	60943938	+	transcript1656.chr15.nnic@NA	transcript1656.chr15.nnic	NA	60940513	60943938	Gene ID= novel_gene_chr15_1657 TPM= 5.31 Transcript Type= NA
chr15	61073470	61075100	61073470	61075100	+	transcript1658.chr15.nnic@NA	transcript1658.chr15.nnic	NA	61073470	61075100	Gene ID= novel_gene_chr15_1659 TPM= 2.12 Transcript Type= NA
chr15	61852389	62060473	61852389	62060473	-	ENST00000249837.7@VPS13C	ENST00000249837.7	protein_coding	62060275,62044212,62041324,62034957,62033441,62023411,62020479,62013933,62013039,62012107,62010472,62008655,62007308,62000564,61991673,61991000,61984857,61983820,61982459,61981342,61978626,61977082,61974288,61973454,61972625,61969299,61967368,61966083,61964699,61963835,61962749,61962371,61961589,61959448,61958608,61954421,61951824,61950945,61950358,61949443,61947193,61946307,61945715,61941763,61940647,61936597,61934219,61931090,61929501,61927091,61925456,61922397,61921947,61920498,61920067,61919289,61918136,61917341,61915633,61913311,61911840,61910177,61908992,61907264,61890165,61884128,61882596,61881747,61881563,61880843,61880609,61878607,61876973,61875732,61874876,61873246,61871989,61869500,61868659,61863440,61856286,61854871,61852389	62060473,62044255,62041366,62035052,62033542,62023520,62020538,62013992,62013119,62012164,62010599,62008761,62007479,62000626,61991802,61991094,61984999,61984012,61982573,61981478,61978749,61977199,61974417,61973532,61972764,61969452,61967447,61966142,61964861,61963951,61962852,61962538,61961893,61959595,61958716,61954554,61951980,61951024,61950417,61949605,61947309,61946410,61945882,61942067,61940794,61936750,61934331,61931259,61929748,61927320,61925548,61922762,61922033,61920647,61920331,61919449,61918257,61917635,61916022,61913415,61912004,61910305,61909125,61907390,61890400,61884269,61882736,61881828,61881632,61880954,61880722,61878746,61877054,61875845,61874951,61873409,61872034,61869623,61868773,61863528,61856409,61854954,61854558	Gene ID= ENSG00000129003.15 TPM= 6.37 Transcript Type= protein_coding
chr15	62060503	62061274	62060503	62061274	+	ENST00000560813.2@AC104590.1	ENST00000560813.2	antisense_RNA	62060503,62060968	62060843,62061274	Gene ID= ENSG00000259251.2 TPM= 1.06 Transcript Type= antisense_RNA
chr15	62163535	62165283	62163535	62165283	-	ENST00000380392.3@C2CD4B	ENST00000380392.3	protein_coding	62165195,62163535	62165283,62165024	Gene ID= ENSG00000205502.3 TPM= 8.5 Transcript Type= protein_coding
chr15	62829114	62832620	62829114	62832620	-	transcript1679.chr15.nnic@NA	transcript1679.chr15.nnic	NA	62829114	62832620	Gene ID= novel_gene_chr15_1680 TPM= 7.44 Transcript Type= NA
chr15	63048366	63070632	63048366	63070632	+	ENST00000334895.9@TPM1	ENST00000334895.9	protein_coding	63048366,63056985,63059563,63060869,63061713,63062215,63062576,63069870	63048707,63057118,63059680,63060939,63061788,63062277,63062645,63070632	Gene ID= ENSG00000140416.19 TPM= 2.24 Transcript Type= protein_coding
chr15	63042750	63066013	63042750	63066013	+	ENST00000403994.7@TPM1	ENST00000403994.7	protein_coding	63042750,63044027,63056985,63059563,63060869,63061713,63062215,63062576,63064064,63065896	63042943,63044152,63057118,63059680,63060939,63061788,63062277,63062645,63064142,63066013	Gene ID= ENSG00000140416.19 TPM= 28.75 Transcript Type= protein_coding
chr15	63042758	63071915	63042758	63071915	+	ENST00000267996.11@TPM1	ENST00000267996.11	protein_coding	63042758,63043706,63056985,63059563,63060869,63061713,63062215,63062576,63071090	63042943,63043831,63057118,63059680,63060939,63061788,63062277,63062645,63071915	Gene ID= ENSG00000140416.19 TPM= 20.3 Transcript Type= protein_coding
chr15	63042758	63071900	63042758	63071900	+	ENST00000559397.5@TPM1	ENST00000559397.5	protein_coding	63042758,63043706,63056985,63059563,63060869,63061198,63062215,63062576,63071090	63042943,63043831,63057118,63059680,63060939,63061273,63062277,63062645,63071900	Gene ID= ENSG00000140416.19 TPM= 5.96 Transcript Type= protein_coding
chr15	63042758	63071222	63042758	63071222	+	ENST00000559556.5@TPM1	ENST00000559556.5	protein_coding	63042758,63044027,63056985,63059563,63060869,63061713,63062215,63062576,63071090	63042943,63044152,63057118,63059680,63060939,63061788,63062277,63062645,63071222	Gene ID= ENSG00000140416.19 TPM= 5.49 Transcript Type= protein_coding
chr15	63042888	63066093	63042888	63066093	+	ENST00000560970.5@TPM1	ENST00000560970.5	protein_coding	63042888,63044027,63056985,63059563,63060869,63061713,63062215,63062576,63064064,63065896	63042943,63044152,63057118,63059680,63060939,63061788,63062277,63062645,63064190,63066093	Gene ID= ENSG00000140416.19 TPM= 2.24 Transcript Type= protein_coding
chr15	63048467	63071884	63048467	63071884	+	ENST00000404484.8@TPM1	ENST00000404484.8	protein_coding	63048467,63056985,63059563,63060869,63061198,63062215,63062576,63071090	63048707,63057118,63059680,63060939,63061273,63062277,63062645,63071884	Gene ID= ENSG00000140416.19 TPM= 4.37 Transcript Type= protein_coding
chr15	63121816	63142061	63121816	63142061	+	transcript1838.chr15.nnic@LACTB	transcript1838.chr15.nnic	protein_coding	63121816,63122085,63122636,63126859,63127353,63129485,63141280	63121976,63122228,63122702,63127049,63127689,63129650,63142061	Gene ID= ENSG00000103642.11 TPM= 6.37 Transcript Type= NA
chr15	63121790	63127457	63121790	63127457	+	transcript1845.chr15.nic@LACTB	transcript1845.chr15.nic	protein_coding	63121790,63122636,63126859,63127353	63122228,63122702,63127049,63127457	Gene ID= ENSG00000103642.11 TPM= 3.19 Transcript Type= NA
chr15	63121800	63142061	63121800	63142061	+	ENST00000261893.8@LACTB	ENST00000261893.8	protein_coding	63121800,63122636,63126859,63127353,63129485,63141280	63122228,63122702,63127049,63127689,63129650,63142061	Gene ID= ENSG00000103642.11 TPM= 41.42 Transcript Type= protein_coding
chr15	63121833	63131471	63121833	63131471	+	ENST00000413507.3@LACTB	ENST00000413507.3	protein_coding	63121833,63122636,63126859,63127353,63129485	63122228,63122702,63127049,63127689,63131471	Gene ID= ENSG00000103642.11 TPM= 1.06 Transcript Type= protein_coding
chr15	63148250	63157802	63148250	63157802	-	ENST00000330964.9@RPS27L	ENST00000330964.9	protein_coding	63157400,63156413,63155621,63148250	63157802,63156521,63155731,63154060	Gene ID= ENSG00000185088.13 TPM= 74.35 Transcript Type= protein_coding
chr15	63189469	63267782	63189469	63267782	+	ENST00000321437.8@RAB8B	ENST00000321437.8	protein_coding	63189469,63244756,63249645,63255507,63256505,63259627,63262692,63263527	63189748,63244816,63249705,63255584,63256594,63259692,63262742,63267782	Gene ID= ENSG00000166128.12 TPM= 4.25 Transcript Type= protein_coding
chr15	63277554	63309126	63277554	63309126	+	ENST00000261879.9@APH1B	ENST00000261879.9	protein_coding	63277554,63279161,63286558,63287424,63302345,63305614	63277736,63279331,63286628,63287546,63302472,63309126	Gene ID= ENSG00000138613.13 TPM= 3.19 Transcript Type= protein_coding
chr15	63284220	63286768	63284220	63286768	-	transcript1852.chr15.nnic@NA	transcript1852.chr15.nnic	NA	63284220	63286768	Gene ID= novel_gene_chr15_1853 TPM= 2.12 Transcript Type= NA
chr15	63504611	63591467	63504611	63591467	+	ENST00000380324.7@USP3	ENST00000380324.7	protein_coding	63504611,63532647,63537025,63553715,63556667,63558106,63559857,63562895,63570433,63574046,63574323,63588305,63588702,63588944,63590661	63504830,63532707,63537156,63553798,63556748,63558188,63559970,63563008,63570579,63574152,63574403,63588423,63588815,63589011,63591467	Gene ID= ENSG00000140455.16 TPM= 15.4 Transcript Type= protein_coding
chr15	63504635	63591444	63504635	63591444	+	ENST00000558157.5@USP3	ENST00000558157.5	protein_coding	63504635,63529014,63532647,63537025,63553715,63556667,63558106,63559857,63562895,63570433,63574046,63574323,63588305,63588702,63588944,63590661	63504830,63529166,63532707,63537156,63553798,63556748,63558188,63559970,63563008,63570579,63574152,63574403,63588423,63588815,63589011,63591444	Gene ID= ENSG00000140455.16 TPM= 1.59 Transcript Type= nonsense_mediated_decay
chr15	63592450	63594210	63592450	63594210	-	transcript1875.chr15.nnic@NA	transcript1875.chr15.nnic	NA	63592450	63594210	Gene ID= novel_gene_chr15_1876 TPM= 4.25 Transcript Type= NA
chr15	63597366	63601241	63597366	63601241	+	transcript1859.chr15.nnic@FBXL22	transcript1859.chr15.nnic	protein_coding	63597366,63599154,63600697	63597745,63599196,63601241	Gene ID= ENSG00000197361.7 TPM= 2.12 Transcript Type= NA
chr15	63597366	63601234	63597366	63601234	+	transcript1861.chr15.nnic@FBXL22	transcript1861.chr15.nnic	protein_coding	63597366,63599154,63600697	63597745,63599244,63601234	Gene ID= ENSG00000197361.7 TPM= 2.12 Transcript Type= NA
chr15	63597353	63602428	63597353	63602428	+	ENST00000360587.2@FBXL22	ENST00000360587.2	protein_coding	63597353,63601296	63597745,63602428	Gene ID= ENSG00000197361.7 TPM= 1.06 Transcript Type= protein_coding
chr15	63597391	63601241	63597391	63601241	+	ENST00000534939.2@FBXL22	ENST00000534939.2	protein_coding	63597391,63599154	63597745,63601241	Gene ID= ENSG00000197361.7 TPM= 12.75 Transcript Type= protein_coding
chr15	63608618	63833888	63608618	63833888	-	ENST00000443617.6@HERC1	ENST00000443617.6	protein_coding	63833827,63774694,63764096,63758175,63756437,63755229,63754505,63752958,63749647,63749367,63747724,63746918,63734724,63732924,63729497,63729236,63727647,63725292,63723182,63718783,63718574,63716302,63713353,63712775,63706780,63698728,63696124,63694774,63694312,63693964,63692411,63690541,63689589,63686359,63680537,63680077,63677845,63674342,63672496,63669538,63666356,63665919,63664470,63662984,63661753,63660973,63659736,63658544,63656088,63655742,63654119,63652414,63651253,63649725,63648069,63645483,63644992,63643404,63642957,63641470,63640152,63638711,63638411,63637505,63635961,63634733,63633848,63632709,63630466,63628677,63625985,63624158,63623725,63622815,63616430,63615768,63612251,63608618	63833888,63775649,63764191,63758369,63756748,63755325,63754648,63753085,63749791,63749538,63747858,63747083,63734849,63733145,63729649,63729368,63727838,63725513,63723355,63718897,63718694,63716473,63713665,63712895,63706831,63698996,63696339,63694894,63694549,63694157,63692566,63690647,63689699,63686535,63680776,63680160,63678365,63675117,63672694,63669698,63666472,63666150,63664594,63663204,63662021,63661025,63659936,63658718,63656358,63655955,63654324,63652541,63651380,63649925,63648199,63645682,63645097,63643550,63643058,63641643,63640445,63638776,63638536,63637643,63636142,63634888,63633970,63632811,63630635,63628815,63626154,63624327,63623890,63622891,63616682,63615920,63612556,63609266	Gene ID= ENSG00000103657.13 TPM= 25.49 Transcript Type= protein_coding
chr15	63694023	63833948	63694023	63833948	-	transcript1882.chr15.nic@HERC1	transcript1882.chr15.nic	protein_coding	63833827,63774694,63764096,63758175,63756437,63755229,63754505,63752958,63749647,63749367,63747724,63746918,63734724,63732924,63729497,63729236,63727647,63725292,63723182,63718783,63718574,63716302,63713353,63712775,63706780,63698728,63696124,63694774,63694312,63694023	63833948,63775649,63764191,63758369,63756748,63755325,63754648,63753085,63749791,63749538,63747858,63747083,63734849,63733145,63729649,63729368,63727838,63725513,63723355,63718897,63718694,63716473,63713665,63712895,63706831,63698996,63696339,63694894,63694549,63694157	Gene ID= ENSG00000103657.13 TPM= 12.75 Transcript Type= NA
chr15	63722908	63728952	63722908	63728952	+	transcript1886.chr15.nnic@NA	transcript1886.chr15.nnic	NA	63722908	63728952	Gene ID= novel_gene_chr15_1887 TPM= 3.19 Transcript Type= NA
chr15	63907923	64046481	63907923	64046481	-	transcript1896.chr15.nic@DAPK2	transcript1896.chr15.nic	protein_coding	64046298,64040170,63983533,63971423,63939232,63930407,63929551,63925941,63924816,63912108,63911908,63907923	64046481,64040267,63983754,63971561,63939361,63930455,63929577,63926093,63924861,63912197,63911991,63911216	Gene ID= ENSG00000035664.11 TPM= 11.68 Transcript Type= NA
chr15	64072559	64094018	64072559	64094018	-	ENST00000300030.7@FAM96A	ENST00000300030.7	protein_coding	64093645,64088687,64081102,64075492,64072559	64094018,64088851,64081151,64075537,64073028	Gene ID= ENSG00000166797.10 TPM= 51.51 Transcript Type= protein_coding
chr15	64072578	64093808	64072578	64093808	-	ENST00000380290.7@FAM96A	ENST00000380290.7	protein_coding	64093645,64088687,64075492,64072578	64093808,64088851,64075537,64073028	Gene ID= ENSG00000166797.10 TPM= 5.84 Transcript Type= protein_coding
chr15	64096000	64138006	64096000	64138006	+	ENST00000559844.5@SNX1	ENST00000559844.5	protein_coding	64096000,64112573,64118117,64118788,64123503,64126079,64127174,64127731,64129916,64130228,64131687,64134664,64136330,64136861,64137568	64096172,64112684,64118244,64118854,64123546,64126220,64127252,64127806,64130029,64130321,64131892,64134807,64136410,64136932,64138006	Gene ID= ENSG00000028528.14 TPM= 214.56 Transcript Type= protein_coding
chr15	64096002	64098541	64096002	64098541	+	transcript1929.chr15.nnic@NA	transcript1929.chr15.nnic	NA	64096002	64098541	Gene ID= novel_gene_chr15_1930 TPM= 2.12 Transcript Type= NA
chr15	64109522	64110985	64109522	64110985	-	transcript1931.chr15.nnic@NA	transcript1931.chr15.nnic	NA	64109522	64110985	Gene ID= novel_gene_chr15_1932 TPM= 2.12 Transcript Type= NA
chr15	64155812	64163205	64155812	64163205	-	ENST00000300026.3@PPIB	ENST00000300026.3	protein_coding	64162852,64162041,64160104,64156725,64155812	64163205,64162154,64160197,64156909,64156145	Gene ID= ENSG00000166794.4 TPM= 165.7 Transcript Type= protein_coding
chr15	64165517	64356259	64165517	64356259	-	ENST00000303052.12@CSNK1G1	ENST00000303052.12	protein_coding	64355988,64300319,64259201,64251512,64216562,64213890,64207509,64204865,64204441,64203082,64180348,64165517	64356259,64300723,64259241,64251581,64216713,64214124,64207594,64204949,64204589,64203189,64180454,64171985	Gene ID= ENSG00000169118.17 TPM= 2.12 Transcript Type= protein_coding
chr15	64387804	64455303	64387804	64455303	+	ENST00000261884.7@TRIP4	ENST00000261884.7	protein_coding	64387804,64393946,64395398,64397606,64400743,64406330,64409613,64414085,64418541,64424031,64425540,64445006,64454997	64387964,64394115,64395531,64397818,64400821,64406459,64409828,64414211,64418728,64424155,64425631,64445108,64455303	Gene ID= ENSG00000103671.9 TPM= 23.37 Transcript Type= protein_coding
chr15	64499292	64686068	64499292	64686068	+	ENST00000326648.4@ZNF609	ENST00000326648.4	protein_coding	64499292,64622827,64670346,64673916,64678116,64680185,64680646,64681309,64681692	64500166,64623052,64670433,64676256,64678482,64680360,64680862,64681387,64686068	Gene ID= ENSG00000180357.9 TPM= 8.5 Transcript Type= protein_coding
chr15	64460570	64675040	64460570	64675040	+	transcript1956.chr15.nic@ZNF609	transcript1956.chr15.nic	protein_coding	64460570,64499293,64622827,64670346,64673916	64460838,64500166,64623052,64670433,64675040	Gene ID= ENSG00000180357.9 TPM= 6.37 Transcript Type= NA
chr15	64687573	64703281	64687573	64703281	-	ENST00000326005.10@OAZ2	ENST00000326005.10	protein_coding	64703029,64691516,64691434,64690374,64689084,64687573	64703281,64691591,64691514,64690549,64689169,64688834	Gene ID= ENSG00000180304.14 TPM= 163.57 Transcript Type= protein_coding
chr15	64739892	64774766	64739892	64774766	-	transcript1967.chr15.nnic@RBPMS2	transcript1967.chr15.nnic	protein_coding	64774656,64751561,64750343,64749431,64749000,64748419,64741173,64739892	64774766,64751638,64750381,64749493,64749150,64748567,64741242,64741000	Gene ID= ENSG00000166831.8 TPM= 63.23 Transcript Type= NA
chr15	64739892	64750493	64739892	64750493	-	transcript1983.chr15.nic@RBPMS2	transcript1983.chr15.nic	protein_coding	64750343,64749431,64749000,64748419,64741173,64739892	64750493,64749493,64749150,64748567,64741242,64741000	Gene ID= ENSG00000166831.8 TPM= 55.8 Transcript Type= NA
chr15	64739898	64775587	64739898	64775587	-	ENST00000300069.4@RBPMS2	ENST00000300069.4	protein_coding	64775233,64751561,64750343,64749431,64749000,64748419,64741173,64739898	64775587,64751638,64750381,64749493,64749150,64748567,64741242,64741000	Gene ID= ENSG00000166831.8 TPM= 122.63 Transcript Type= protein_coding
chr15	64762220	64765249	64762220	64765249	+	transcript1986.chr15.nnic@NA	transcript1986.chr15.nnic	NA	64762220	64765249	Gene ID= novel_gene_chr15_1987 TPM= 9.56 Transcript Type= NA
chr15	64951563	64952417	64951563	64952417	-	transcript2008.chr15.nnic@NA	transcript2008.chr15.nnic	NA	64951563	64952417	Gene ID= novel_gene_chr15_2009 TPM= 3.19 Transcript Type= NA
chr15	64955062	64989940	64955062	64989940	-	transcript1993.chr15.nnic@SPG21	transcript1993.chr15.nnic	protein_coding	64989665,64983507,64980864,64976475,64974602,64970114,64969255,64965320,64963531,64957099,64955062	64989940,64983593,64981025,64976555,64974747,64970222,64969362,64965460,64963736,64957269,64955806	Gene ID= ENSG00000090487.10 TPM= 3.72 Transcript Type= NA
chr15	64963021	64989936	64963021	64989936	-	ENST00000204566.6@SPG21	ENST00000204566.6	protein_coding	64989665,64983507,64980864,64976475,64974602,64970114,64969255,64965320,64963021	64989936,64983593,64981025,64976555,64974747,64970222,64969362,64965460,64963736	Gene ID= ENSG00000090487.10 TPM= 94 Transcript Type= protein_coding
chr15	64963027	64989913	64963027	64989913	-	transcript1996.chr15.nic@SPG21	transcript1996.chr15.nic	protein_coding	64989665,64980864,64976475,64974602,64970114,64969255,64965320,64963027	64989913,64981025,64976555,64974747,64970222,64969362,64965460,64963736	Gene ID= ENSG00000090487.10 TPM= 7.44 Transcript Type= NA
chr15	65002510	65029629	65002510	65029629	-	transcript2011.chr15.nnic@MTFMT	transcript2011.chr15.nnic	protein_coding	65029252,65026831,65023672,65021514,65020197,65016436,65006113,65004854,65002510	65029629,65027040,65023794,65021616,65020272,65016527,65006191,65004936,65003256	Gene ID= ENSG00000103707.9 TPM= 3.19 Transcript Type= NA
chr15	65002996	65029638	65002996	65029638	-	transcript2014.chr15.nnic@MTFMT	transcript2014.chr15.nnic	protein_coding	65029405,65026831,65023672,65021514,65020197,65016436,65006113,65004854,65002996	65029638,65027040,65023770,65021616,65020272,65016527,65006191,65004936,65003256	Gene ID= ENSG00000103707.9 TPM= 2.12 Transcript Type= NA
chr15	65001512	65029627	65001512	65029627	-	ENST00000220058.8@MTFMT	ENST00000220058.8	protein_coding	65029405,65026831,65023672,65021514,65020197,65016436,65006113,65004854,65001512	65029627,65027040,65023794,65021616,65020272,65016527,65006191,65004936,65003256	Gene ID= ENSG00000103707.9 TPM= 2.12 Transcript Type= protein_coding
chr15	65053337	65076691	65053337	65076691	-	transcript2021.chr15.nnic@RASL12	transcript2021.chr15.nnic	protein_coding	65076529,65073299,65065217,65059345,65058427,65053337	65076691,65073365,65065273,65059418,65058617,65055274	Gene ID= ENSG00000103710.10 TPM= 12.21 Transcript Type= NA
chr15	65053337	65076691	65053337	65076691	-	transcript2024.chr15.nnic@RASL12	transcript2024.chr15.nnic	protein_coding	65076529,65073299,65059345,65058427,65053337	65076691,65073365,65059418,65058617,65055274	Gene ID= ENSG00000103710.10 TPM= 4.78 Transcript Type= NA
chr15	65076177	65079946	65076177	65079946	+	transcript2028.chr15.nnic@NA	transcript2028.chr15.nnic	NA	65076177	65079946	Gene ID= novel_gene_chr15_2029 TPM= 5.31 Transcript Type= NA
chr15	65087154	65088228	65087154	65088228	+	transcript2030.chr15.nnic@NA	transcript2030.chr15.nnic	NA	65087154	65088228	Gene ID= novel_gene_chr15_2031 TPM= 2.12 Transcript Type= NA
chr15	65119773	65133853	65119773	65133853	-	transcript2034.chr15.nic@PDCD7	transcript2034.chr15.nic	protein_coding	65132912,65129032,65119773	65133853,65129170,65119954	Gene ID= ENSG00000090470.14 TPM= 26.55 Transcript Type= NA
chr15	65117379	65133836	65117379	65133836	-	ENST00000204549.8@PDCD7	ENST00000204549.8	protein_coding	65132912,65129032,65119718,65119376,65117379	65133836,65129170,65119954,65119463,65118840	Gene ID= ENSG00000090470.14 TPM= 8.5 Transcript Type= protein_coding
chr15	65148224	65185336	65148224	65185336	-	transcript2035.chr15.nnic@CLPX	transcript2035.chr15.nnic	protein_coding	65185075,65180044,65178934,65166631,65164029,65162604,65158575,65157746,65156844,65155692,65154782,65153547,65152430,65150416,65148224	65185336,65180204,65179051,65166785,65164188,65162645,65158751,65157910,65156932,65155856,65155081,65153639,65152536,65150913,65149590	Gene ID= ENSG00000166855.9 TPM= 2.12 Transcript Type= NA
chr15	65148222	65185346	65148222	65185346	-	transcript2038.chr15.nnic@CLPX	transcript2038.chr15.nnic	protein_coding	65185075,65180044,65178934,65166631,65164029,65162604,65158575,65157746,65156844,65155692,65154782,65153573,65148222	65185346,65180204,65179051,65166785,65164188,65162645,65158751,65157910,65156932,65155856,65155081,65153639,65149615	Gene ID= ENSG00000166855.9 TPM= 3.19 Transcript Type= NA
chr15	65148219	65185342	65148219	65185342	-	ENST00000300107.7@CLPX	ENST00000300107.7	protein_coding	65185075,65180044,65178934,65166631,65164029,65162604,65158575,65157746,65156844,65155692,65154782,65153547,65152430,65148219	65185342,65180204,65179051,65166785,65164188,65162645,65158751,65157910,65156932,65155856,65155081,65153639,65152536,65150913	Gene ID= ENSG00000166855.9 TPM= 2.12 Transcript Type= protein_coding
chr15	65194758	65211488	65194758	65211488	-	ENST00000261883.5@CILP	ENST00000261883.5	protein_coding	65211428,65209695,65207672,65206782,65205287,65204268,65203362,65201872,65194758	65211488,65209861,65207764,65207051,65205466,65204582,65203470,65202029,65199099	Gene ID= ENSG00000138615.5 TPM= 35.05 Transcript Type= protein_coding
chr15	65258094	65286872	65258094	65286872	-	ENST00000261888.10@PARP16	ENST00000261888.10	protein_coding	65286253,65270935,65266562,65263149,65260885,65258094	65286872,65271072,65266768,65263320,65261026,65259545	Gene ID= ENSG00000138617.14 TPM= 8.5 Transcript Type= protein_coding
chr15	65446617	65517680	65446617	65517680	-	ENST00000358939.8@DPP8	ENST00000358939.8	protein_coding	65517486,65512295,65507243,65500606,65497864,65490189,65487690,65485099,65481515,65480222,65478880,65474209,65467071,65466678,65463761,65451960,65450999,65446617	65517680,65512564,65507355,65500779,65498032,65490299,65487818,65485160,65481615,65480399,65479039,65474288,65467223,65466813,65463906,65452102,65451110,65447006	Gene ID= ENSG00000074603.18 TPM= 2.12 Transcript Type= protein_coding
chr15	65446619	65517699	65446619	65517699	-	ENST00000300141.10@DPP8	ENST00000300141.10	protein_coding	65517486,65512295,65507243,65500606,65497864,65490189,65487690,65485099,65481515,65480222,65478880,65474209,65467071,65466678,65463761,65456225,65454263,65451960,65450999,65446619	65517699,65512564,65507355,65500779,65498032,65490299,65487818,65485160,65481615,65480399,65479039,65474288,65467223,65466813,65463906,65456371,65454415,65452102,65451110,65447006	Gene ID= ENSG00000074603.18 TPM= 18.06 Transcript Type= protein_coding
chr15	65530466	65578352	65530466	65578352	+	ENST00000261875.9@HACD3	ENST00000261875.9	protein_coding	65530466,65551676,65554887,65556739,65558680,65562774,65564215,65570091,65571548,65572235,65576303	65530718,65551718,65554960,65556903,65558731,65562884,65564342,65570203,65571654,65572366,65578352	Gene ID= ENSG00000074696.12 TPM= 27.62 Transcript Type= protein_coding
chr15	65578753	65611136	65578753	65611136	-	ENST00000573314.5@INTS14	ENST00000573314.5	protein_coding	65610796,65607159,65605129,65599774,65598872,65598321,65595733,65593428,65591598,65584770,65581954,65578753	65611136,65607442,65605236,65599929,65598990,65598463,65595825,65593572,65591731,65584888,65582019,65579659	Gene ID= ENSG00000138614.14 TPM= 5.23 Transcript Type= nonsense_mediated_decay
chr15	65578782	65611122	65578782	65611122	-	transcript2069.chr15.nic@INTS14	transcript2069.chr15.nic	protein_coding	65610686,65607159,65605129,65599774,65598872,65598321,65595733,65593428,65591598,65584770,65581954,65578782	65611122,65607442,65605236,65599929,65598990,65598463,65595825,65593572,65591731,65584888,65582019,65579659	Gene ID= ENSG00000138614.14 TPM= 4.16 Transcript Type= NA
chr15	65578782	65611245	65578782	65611245	-	ENST00000313182.6@INTS14	ENST00000313182.6	protein_coding	65611098,65607159,65605129,65599774,65598872,65598321,65595733,65593428,65591598,65584770,65581954,65578782	65611245,65607442,65605236,65599929,65598990,65598463,65595825,65593572,65591731,65584888,65582019,65579659	Gene ID= ENSG00000138614.14 TPM= 11.6 Transcript Type= protein_coding
chr15	65578782	65611123	65578782	65611123	-	transcript2072.chr15.nic@INTS14	transcript2072.chr15.nic	protein_coding	65610796,65607302,65605129,65599774,65598872,65598321,65595733,65593428,65591598,65584770,65581954,65578782	65611123,65607442,65605236,65599929,65598990,65598463,65595825,65593572,65591731,65584888,65582019,65579659	Gene ID= ENSG00000138614.14 TPM= 2.39 Transcript Type= NA
chr15	65659123	65792124	65659123	65792124	-	ENST00000443035.7@DENND4A	ENST00000443035.7	protein_coding	65792010,65761360,65756140,65752379,65741715,65738706,65737707,65732752,65731642,65729534,65729072,65722848,65717778,65715478,65706091,65702873,65702305,65701762,65701051,65700544,65697267,65696366,65690415,65676445,65671792,65670013,65669779,65667925,65667449,65665345,65664560,65664330,65659123	65792124,65761438,65756472,65752628,65741784,65738875,65737945,65732818,65731700,65729678,65729247,65722948,65717996,65715623,65706224,65703008,65702511,65701890,65701192,65700672,65697383,65696497,65691511,65676634,65671886,65670188,65669925,65668123,65667703,65665462,65664722,65664394,65661987	Gene ID= ENSG00000174485.15 TPM= 1.06 Transcript Type= protein_coding
chr15	65869458	65891991	65869458	65891991	+	ENST00000261890.6@RAB11A	ENST00000261890.6	protein_coding	65869458,65877332,65877762,65879671,65887701	65869625,65877527,65877955,65879751,65891991	Gene ID= ENSG00000103769.9 TPM= 5.31 Transcript Type= protein_coding
chr15	66293217	66333898	66293217	66333898	+	ENST00000319194.9@DIS3L	ENST00000319194.9	protein_coding	66293217,66294988,66306824,66308709,66311724,66314039,66315036,66318449,66320571,66322687,66323493,66325831,66328970,66329221,66331875,66332736,66333004	66293367,66295141,66306952,66308844,66311900,66314117,66315215,66318618,66320732,66322934,66323585,66326364,66329124,66329399,66332020,66332910,66333898	Gene ID= ENSG00000166938.12 TPM= 5.31 Transcript Type= protein_coding
chr15	66293757	66333898	66293757	66333898	+	transcript2102.chr15.nic@DIS3L	transcript2102.chr15.nic	protein_coding	66293757,66294988,66306824,66308709,66311724,66314039,66315036,66318449,66320571,66322687,66323493,66325831,66328970,66329221,66331875,66332736,66333004	66294174,66295141,66306952,66308844,66311900,66314117,66315215,66318618,66320732,66322934,66323585,66326364,66329124,66329399,66332020,66332910,66333898	Gene ID= ENSG00000166938.12 TPM= 11.68 Transcript Type= NA
chr15	66293808	66333744	66293808	66333744	+	transcript2104.chr15.nic@DIS3L	transcript2104.chr15.nic	protein_coding	66293808,66294988,66306824,66308709,66311724,66314039,66315036,66318449,66320571,66322687,66323493,66325831,66328970,66329221,66331875,66332736,66333004	66294448,66295141,66306952,66308844,66311900,66314117,66315215,66318618,66320732,66322934,66323585,66326364,66329124,66329399,66332020,66332910,66333744	Gene ID= ENSG00000166938.12 TPM= 2.12 Transcript Type= NA
chr15	66293526	66318761	66293526	66318761	+	transcript2107.chr15.nic@DIS3L	transcript2107.chr15.nic	protein_coding	66293526,66294988,66306824,66308709,66311724,66314039,66315036,66318449	66293735,66295141,66306952,66308844,66311900,66314117,66315215,66318761	Gene ID= ENSG00000166938.12 TPM= 3.19 Transcript Type= NA
chr15	66293547	66333744	66293547	66333744	+	ENST00000319212.8@DIS3L	ENST00000319212.8	protein_coding	66293547,66294988,66306824,66308709,66311724,66314039,66315036,66318449,66320571,66322687,66323493,66325831,66328970,66329221,66331875,66332736,66333004	66293735,66295141,66306952,66308844,66311900,66314117,66315215,66318618,66320732,66322934,66323585,66326364,66329124,66329399,66332020,66332910,66333744	Gene ID= ENSG00000166938.12 TPM= 4.25 Transcript Type= protein_coding
chr15	66336206	66356716	66336206	66356716	-	ENST00000261881.8@TIPIN	ENST00000261881.8	protein_coding	66356639,66352815,66352129,66351525,66349315,66349060,66341150,66336206	66356716,66352955,66352207,66351600,66349437,66349123,66341356,66337181	Gene ID= ENSG00000075131.9 TPM= 1.06 Transcript Type= protein_coding
chr15	66378475	66386731	66378475	66386731	-	transcript2112.chr15.nnic@TIPIN	transcript2112.chr15.nnic	protein_coding	66386607,66378475	66386731,66379940	Gene ID= ENSG00000075131.9 TPM= 4.25 Transcript Type= NA
chr15	66386817	66492312	66386817	66492312	+	ENST00000307102.9@MAP2K1	ENST00000307102.9	protein_coding	66386817,66435027,66436746,66443280,66444656,66481755,66484990,66487228,66489215,66489718,66490502	66387427,66435237,66436892,66443357,66444707,66481879,66485191,66487292,66489276,66489763,66492312	Gene ID= ENSG00000169032.9 TPM= 41.42 Transcript Type= protein_coding
chr15	66452185	66453497	66452185	66453497	-	transcript2127.chr15.nnic@NA	transcript2127.chr15.nnic	NA	66452185	66453497	Gene ID= novel_gene_chr15_2128 TPM= 2.12 Transcript Type= NA
chr15	66493844	66497759	66493844	66497759	-	ENST00000565465.1@SNAPC5	ENST00000565465.1	protein_coding	66497490,66495330,66493844	66497759,66495419,66494552	Gene ID= ENSG00000174446.12 TPM= 1.06 Transcript Type= nonsense_mediated_decay
chr15	66493813	66497813	66493813	66497813	-	ENST00000316634.5@SNAPC5	ENST00000316634.5	protein_coding	66497642,66495330,66493813	66497813,66495419,66494552	Gene ID= ENSG00000174446.12 TPM= 40.36 Transcript Type= protein_coding
chr15	66498015	66504883	66498015	66504883	-	ENST00000307961.10@RPL4	ENST00000307961.10	protein_coding	66504788,66503358,66503058,66502612,66501788,66501375,66500949,66500293,66500056,66498015	66504883,66503529,66503164,66502750,66501912,66501504,66501105,66500376,66500176,66499652	Gene ID= ENSG00000174444.14 TPM= 13.81 Transcript Type= protein_coding
chr15	66504959	66550128	66504959	66550128	+	ENST00000307897.9@ZWILCH	ENST00000307897.9	protein_coding	66504959,66508841,66513988,66515526,66518879,66520590,66521050,66523677,66527290,66527857,66528852,66529494,66532247,66532985,66535933,66537168,66540098,66546591,66548351	66505391,66508892,66514083,66515644,66519078,66520660,66521205,66523748,66527383,66527912,66528957,66529573,66532403,66533013,66536069,66537263,66540210,66546705,66550128	Gene ID= ENSG00000174442.11 TPM= 1.06 Transcript Type= protein_coding
chr15	66702191	66781832	66702191	66781832	+	transcript2139.chr15.nnic@SMAD6	transcript2139.chr15.nnic	protein_coding	66702191,66708173,66711668,66716421,66780997	66704075,66708738,66711724,66716498,66781832	Gene ID= ENSG00000137834.14 TPM= 2.39 Transcript Type= NA
chr15	66702191	66781988	66702191	66781988	+	transcript2141.chr15.nnic@SMAD6	transcript2141.chr15.nnic	protein_coding	66702191,66708499,66711668,66716421,66780997	66704075,66708738,66711724,66716498,66781988	Gene ID= ENSG00000137834.14 TPM= 3.98 Transcript Type= NA
chr15	66702254	66781988	66702254	66781988	+	transcript2143.chr15.nnic@SMAD6	transcript2143.chr15.nnic	protein_coding	66702254,66710395,66711668,66716421,66780997	66704075,66710473,66711724,66716498,66781988	Gene ID= ENSG00000137834.14 TPM= 3.98 Transcript Type= NA
chr15	66702224	66781832	66702224	66781832	+	transcript2149.chr15.nnic@SMAD6	transcript2149.chr15.nnic	protein_coding	66702224,66711668,66716421,66780997	66704289,66711724,66716498,66781832	Gene ID= ENSG00000137834.14 TPM= 2.39 Transcript Type= NA
chr15	66705779	66781832	66705779	66781832	+	transcript2151.chr15.nnic@SMAD6	transcript2151.chr15.nnic	protein_coding	66705779,66711668,66716421,66780997	66708738,66711724,66716498,66781832	Gene ID= ENSG00000137834.14 TPM= 5.31 Transcript Type= NA
chr15	66718747	66723709	66718747	66723709	+	transcript2155.chr15.nnic@NA	transcript2155.chr15.nnic	NA	66718747	66723709	Gene ID= novel_gene_chr15_2156 TPM= 6.37 Transcript Type= NA
chr15	66726871	66728249	66726871	66728249	-	transcript2159.chr15.nnic@NA	transcript2159.chr15.nnic	NA	66726871	66728249	Gene ID= novel_gene_chr15_2160 TPM= 3.19 Transcript Type= NA
chr15	66728044	66731276	66728044	66731276	+	transcript2157.chr15.nnic@NA	transcript2157.chr15.nnic	NA	66728044	66731276	Gene ID= novel_gene_chr15_2158 TPM= 2.12 Transcript Type= NA
chr15	66859394	66863488	66859394	66863488	-	transcript2161.chr15.nnic@NA	transcript2161.chr15.nnic	NA	66859394	66863488	Gene ID= novel_gene_chr15_2162 TPM= 8.5 Transcript Type= NA
chr15	67177423	67191521	67177423	67191521	+	transcript2164.chr15.nic@SMAD3	transcript2164.chr15.nic	protein_coding	67177423,67184727,67187365,67190413	67181453,67184864,67187509,67191521	Gene ID= ENSG00000166949.15 TPM= 13.81 Transcript Type= NA
chr15	67112156	67113321	67112156	67113321	-	transcript2169.chr15.nnic@NA	transcript2169.chr15.nnic	NA	67112156	67113321	Gene ID= novel_gene_chr15_2170 TPM= 2.12 Transcript Type= NA
chr15	67201673	67254657	67201673	67254657	-	transcript2175.chr15.nnic@AAGAB	transcript2175.chr15.nnic	protein_coding	67254224,67236630,67236408,67235979,67231814,67209462,67208562,67204044,67203548,67201673	67254657,67236820,67236504,67236068,67231897,67209544,67208658,67204148,67203597,67202898	Gene ID= ENSG00000103591.12 TPM= 4.25 Transcript Type= NA
chr15	67201033	67254736	67201033	67254736	-	ENST00000261880.9@AAGAB	ENST00000261880.9	protein_coding	67254559,67236630,67236408,67235979,67231814,67209462,67208562,67204044,67203548,67201033	67254736,67236820,67236504,67236068,67231897,67209544,67208658,67204148,67203597,67202898	Gene ID= ENSG00000103591.12 TPM= 7.44 Transcript Type= protein_coding
chr15	67201707	67254675	67201707	67254675	-	ENST00000561452.5@AAGAB	ENST00000561452.5	protein_coding	67254414,67236630,67236408,67235979,67231814,67209462,67208562,67204044,67203548,67201707	67254675,67236820,67236504,67236068,67231897,67209544,67208658,67204148,67203597,67202898	Gene ID= ENSG00000103591.12 TPM= 5.31 Transcript Type= protein_coding
chr15	67514920	67521635	67514920	67521635	-	transcript2193.chr15.nnic@IQCH-AS1	transcript2193.chr15.nnic	lincRNA	67521519,67519000,67514920	67521635,67519102,67515066	Gene ID= ENSG00000259673.5 TPM= 5.31 Transcript Type= NA
chr15	67521068	67530143	67521068	67530143	+	ENST00000342683.5@C15orf61	ENST00000342683.5	protein_coding	67521068,67526418	67521594,67530143	Gene ID= ENSG00000189227.5 TPM= 6.37 Transcript Type= protein_coding
chr15	67521236	67807111	67521236	67807111	+	transcript2182.chr15.nnic@MAP2K5	transcript2182.chr15.nnic	protein_coding	67521236,67550034,67563283,67580754,67585890,67586846,67592926,67600685,67630888,67646231,67646388,67658553,67664597,67692479,67693518,67703337,67727916,67748231,67748569,67769602,67772707,67806646	67521594,67550082,67563350,67580823,67585930,67586913,67592974,67600749,67630927,67646299,67646469,67658614,67664645,67692552,67693568,67703408,67727945,67748257,67748601,67769663,67772752,67807111	Gene ID= ENSG00000137764.19 TPM= 2.39 Transcript Type= NA
chr15	67548998	67807111	67548998	67807111	+	ENST00000354498.9@MAP2K5	ENST00000354498.9	protein_coding	67548998,67550034,67563283,67580754,67585890,67586846,67592926,67600685,67630888,67646231,67646388,67658553,67664597,67692479,67693518,67703337,67727916,67748231,67748569,67769602,67772707,67806646	67549207,67550082,67563350,67580823,67585930,67586913,67592974,67600749,67630927,67646299,67646469,67658614,67664645,67692552,67693568,67703408,67727945,67748257,67748601,67769663,67772752,67807111	Gene ID= ENSG00000137764.19 TPM= 5.58 Transcript Type= protein_coding
chr15	67549084	67807111	67549084	67807111	+	transcript2185.chr15.nnic@MAP2K5	transcript2185.chr15.nnic	protein_coding	67549084,67550034,67563283,67585890,67586846,67592926,67600685,67630888,67646231,67646388,67658553,67664597,67692479,67693518,67703337,67727916,67748231,67748569,67769602,67772707,67806646	67549207,67550082,67563350,67585930,67586913,67592974,67600749,67630927,67646299,67646469,67658614,67664645,67692552,67693568,67703408,67727945,67748257,67748601,67769663,67772752,67807111	Gene ID= ENSG00000137764.19 TPM= 2.39 Transcript Type= NA
chr15	67542709	67807123	67542709	67807123	+	ENST00000178640.9@MAP2K5	ENST00000178640.9	protein_coding	67542709,67550034,67563283,67580754,67585890,67586846,67592926,67600685,67630888,67646231,67646388,67658553,67664597,67692479,67693518,67703337,67727916,67748231,67748569,67769602,67772707,67806646	67543470,67550082,67563350,67580823,67585930,67586913,67592974,67600749,67630927,67646299,67646469,67658614,67664645,67692552,67693568,67703408,67727945,67748257,67748601,67769663,67772752,67807123	Gene ID= ENSG00000137764.19 TPM= 20.45 Transcript Type= protein_coding
chr15	67541072	67542604	67541072	67542604	-	ENST00000604760.1@AC016355.1	ENST00000604760.1	lincRNA	67541072	67542604	Gene ID= ENSG00000270964.1 TPM= 2.12 Transcript Type= lincRNA
chr15	68054179	68193846	68054179	68193846	+	ENST00000249636.10@PIAS1	ENST00000249636.10	protein_coding	68054179,68086306,68141946,68142290,68145816,68146566,68153590,68164731,68173732,68175637,68176474,68181212,68183630,68187542	68054350,68086750,68142030,68142337,68145906,68146700,68153695,68164804,68173892,68175767,68176654,68181354,68183667,68193846	Gene ID= ENSG00000033800.13 TPM= 8.5 Transcript Type= protein_coding
chr15	68193804	68205561	68193804	68205561	-	ENST00000467889.1@CALML4	ENST00000467889.1	protein_coding	68205245,68205121,68199541,68197440,68193804	68205561,68205151,68199681,68197628,68194112	Gene ID= ENSG00000129007.14 TPM= 1.06 Transcript Type= protein_coding
chr15	68206992	68229743	68206992	68229743	-	ENST00000249806.10@CLN6	ENST00000249806.10	protein_coding	68229502,68218536,68214290,68211675,68211263,68209637,68206992	68229743,68218650,68214388,68211863,68211318,68209759,68208410	Gene ID= ENSG00000128973.12 TPM= 3.19 Transcript Type= protein_coding
chr15	68277803	68295865	68277803	68295865	+	ENST00000306917.4@FEM1B	ENST00000306917.4	protein_coding	68277803,68289607	68278665,68295865	Gene ID= ENSG00000169018.5 TPM= 15.93 Transcript Type= protein_coding
chr15	68283887	68285786	68283887	68285786	-	transcript2215.chr15.nnic@NA	transcript2215.chr15.nnic	NA	68283887	68285786	Gene ID= novel_gene_chr15_2216 TPM= 2.12 Transcript Type= NA
chr15	68286219	68290568	68286219	68290568	-	transcript2213.chr15.nnic@NA	transcript2213.chr15.nnic	NA	68286219	68290568	Gene ID= novel_gene_chr15_2214 TPM= 4.25 Transcript Type= NA
chr15	68296533	68432162	68296533	68432162	-	ENST00000423218.6@ITGA11	ENST00000423218.6	protein_coding	68432015,68402918,68369184,68364707,68361590,68358458,68357151,68351258,68350617,68348830,68339500,68335697,68332338,68331859,68330981,68328096,68326654,68325131,68321418,68320185,68317265,68315651,68313779,68312773,68311287,68310994,68307586,68307348,68303772,68296533	68432162,68403029,68369284,68364798,68361704,68358585,68357299,68351402,68350782,68348900,68339644,68335845,68332478,68332062,68331111,68328262,68326796,68325241,68321503,68320392,68317363,68315727,68313868,68312863,68311403,68311080,68307696,68307443,68303885,68303130	Gene ID= ENSG00000137809.16 TPM= 2.12 Transcript Type= protein_coding
chr15	68778535	68820895	68778535	68820895	-	ENST00000465139.6@ANP32A	ENST00000465139.6	protein_coding	68820698,68787770,68787413,68784397,68782956,68780410,68778535	68820895,68787919,68787535,68784595,68783053,68780473,68780142	Gene ID= ENSG00000140350.15 TPM= 11.68 Transcript Type= protein_coding
chr15	68809568	68811079	68809568	68811079	+	transcript2234.chr15.nnic@NA	transcript2234.chr15.nnic	NA	68809568	68811079	Gene ID= novel_gene_chr15_2235 TPM= 2.12 Transcript Type= NA
chr15	68930500	68946811	68930500	68946811	+	ENST00000310673.3@SPESP1	ENST00000310673.3	protein_coding	68930500,68945599	68930717,68946811	Gene ID= ENSG00000258484.3 TPM= 4.25 Transcript Type= protein_coding
chr15	69160634	69272199	69160634	69272199	+	ENST00000261858.6@GLCE	ENST00000261858.6	protein_coding	69160634,69210316,69255794,69261087,69268220	69160757,69210406,69256392,69261329,69272199	Gene ID= ENSG00000138604.9 TPM= 2.12 Transcript Type= protein_coding
chr15	69396904	69415029	69396904	69415029	-	ENST00000558617.1@AC027237.3	ENST00000558617.1	antisense_RNA	69414152,69400973,69396904	69415029,69401027,69397748	Gene ID= ENSG00000259426.5 TPM= 1.06 Transcript Type= antisense_RNA
chr15	69452821	69455546	69452821	69455546	+	transcript2244.chr15.nnic@RPLP1	transcript2244.chr15.nnic	protein_coding	69452821,69452885,69453647,69455170,69455428	69452829,69453020,69453721,69455287,69455546	Gene ID= ENSG00000137818.11 TPM= 42.84 Transcript Type= NA
chr15	69452814	69455547	69452814	69455547	+	ENST00000357790.5@RPLP1	ENST00000357790.5	protein_coding	69452814,69455170,69455428	69453020,69455287,69455547	Gene ID= ENSG00000137818.11 TPM= 20.53 Transcript Type= protein_coding
chr15	69452784	69456194	69452784	69456194	+	ENST00000260379.10@RPLP1	ENST00000260379.10	protein_coding	69452784,69453647,69455170,69455428	69453020,69453721,69455287,69456194	Gene ID= ENSG00000137818.11 TPM= 8.5 Transcript Type= protein_coding
chr15	70047790	70098176	70047790	70098176	-	ENST00000558939.5@TLE3	ENST00000558939.5	protein_coding	70096775,70096161,70095578,70094532,70076096,70074533,70066014,70064454,70060530,70059410,70058663,70058150,70057459,70056298,70055049,70054438,70053227,70052374,70051391,70047790	70098176,70096261,70095641,70094576,70076158,70074607,70066218,70064470,70060649,70059460,70058815,70058291,70057658,70056374,70055298,70054685,70053374,70052524,70051467,70050204	Gene ID= ENSG00000140332.15 TPM= 18.06 Transcript Type= protein_coding
chr15	70076723	70079445	70076723	70079445	-	transcript2257.chr15.nnic@NA	transcript2257.chr15.nnic	NA	70076723	70079445	Gene ID= novel_gene_chr15_2258 TPM= 2.12 Transcript Type= NA
chr15	70654554	70763593	70654554	70763593	-	ENST00000322954.10@UACA	ENST00000322954.10	protein_coding	70763330,70699527,70695017,70691299,70690454,70687750,70687540,70684265,70682758,70679608,70678099,70677108,70676493,70671965,70671039,70666724,70664662,70660151,70654554	70763593,70699660,70695105,70691363,70690511,70687820,70687646,70684446,70682795,70679676,70678206,70677140,70676591,70672001,70671091,70669462,70664814,70660216,70657127	Gene ID= ENSG00000137831.14 TPM= 1.06 Transcript Type= protein_coding
chr15	70656802	70702308	70656802	70702308	-	ENST00000379983.6@UACA	ENST00000379983.6	protein_coding	70701877,70699527,70695017,70691299,70690454,70687750,70687540,70684265,70682758,70679608,70678099,70677108,70676493,70671965,70671039,70666724,70664662,70660151,70656802	70702308,70699660,70695105,70691363,70690511,70687820,70687646,70684446,70682795,70679676,70678206,70677140,70676591,70672001,70671091,70669462,70664814,70660216,70657127	Gene ID= ENSG00000137831.14 TPM= 2.12 Transcript Type= protein_coding
chr15	70668918	70763500	70668918	70763500	-	transcript2283.chr15.nic@UACA	transcript2283.chr15.nic	protein_coding	70763330,70699527,70695017,70691299,70690454,70687750,70687540,70684265,70682758,70679608,70678099,70676493,70671965,70671039,70668918	70763500,70699660,70695105,70691363,70690511,70687820,70687646,70684446,70682795,70679676,70678206,70676591,70672001,70671091,70669462	Gene ID= ENSG00000137831.14 TPM= 2.12 Transcript Type= NA
chr15	70692816	70763564	70692816	70763564	-	transcript2285.chr15.nnic@UACA	transcript2285.chr15.nnic	protein_coding	70763330,70699527,70695017,70692816	70763564,70699660,70695105,70693674	Gene ID= ENSG00000137831.14 TPM= 2.12 Transcript Type= NA
chr15	70760265	70761412	70760265	70761412	+	transcript2287.chr15.nnic@NA	transcript2287.chr15.nnic	NA	70760265	70761412	Gene ID= novel_gene_chr15_2288 TPM= 6.37 Transcript Type= NA
chr15	70851427	70854121	70851427	70854121	-	ENST00000344870.4@LARP6	ENST00000344870.4	protein_coding	70853889,70851427	70854121,70851720	Gene ID= ENSG00000166173.10 TPM= 5.31 Transcript Type= protein_coding
chr15	70942795	71050095	70942795	71050095	+	transcript2301.chr15.nnic@LRRC49	transcript2301.chr15.nnic	protein_coding	70942795,70963785,70980101,70984094,71008379,71009807,71012804,71037179,71049409	70942865,70963932,70980184,70984257,71008616,71009992,71012913,71037332,71050095	Gene ID= ENSG00000137821.11 TPM= 69.04 Transcript Type= NA
chr15	70881342	70892785	70881342	70892785	-	ENST00000249861.8@THAP10	ENST00000249861.8	protein_coding	70891844,70882761,70881342	70892785,70882908,70882650	Gene ID= ENSG00000129028.8 TPM= 3.19 Transcript Type= protein_coding
chr15	71264112	71266907	71264112	71266907	+	transcript2309.chr15.nnic@NA	transcript2309.chr15.nnic	NA	71264112	71266907	Gene ID= novel_gene_chr15_2310 TPM= 2.12 Transcript Type= NA
chr15	71290877	71292821	71290877	71292821	-	transcript2313.chr15.nnic@NA	transcript2313.chr15.nnic	NA	71290877	71292821	Gene ID= novel_gene_chr15_2314 TPM= 5.31 Transcript Type= NA
chr15	71332894	71339411	71332894	71339411	-	transcript2311.chr15.nnic@NA	transcript2311.chr15.nnic	NA	71332894	71339411	Gene ID= novel_gene_chr15_2312 TPM= 11.68 Transcript Type= NA
chr15	71346870	71347913	71346870	71347913	-	transcript2315.chr15.nnic@NA	transcript2315.chr15.nnic	NA	71346870	71347913	Gene ID= novel_gene_chr15_2316 TPM= 7.44 Transcript Type= NA
chr15	71096952	71783383	71096952	71783383	+	ENST00000355327.7@THSD4	ENST00000355327.7	protein_coding	71096952,71141449,71154863,71215035,71242649,71256613,71411687,71660530,71728549,71731121,71737732,71745106,71746838,71748421,71757902,71765020,71771064,71777232	71097006,71141556,71154932,71215399,71243096,71256715,71411823,71660734,71728724,71731217,71738007,71745235,71747042,71748594,71758075,71765199,71771208,71783383	Gene ID= ENSG00000187720.14 TPM= 54.17 Transcript Type= protein_coding
chr15	71660528	71739114	71660528	71739114	+	transcript2320.chr15.nic@THSD4	transcript2320.chr15.nic	protein_coding	71660528,71728549,71731121,71737732	71660734,71728724,71731217,71739114	Gene ID= ENSG00000187720.14 TPM= 3.19 Transcript Type= NA
chr15	71825992	71898838	71825992	71898838	-	ENST00000561618.5@MYO9A	ENST00000561618.5	protein_coding	71897461,71893679,71892965,71888004,71883594,71880335,71879721,71878040,71875791,71862500,71859735,71854377,71852132,71851253,71850036,71848845,71830109,71827884,71825992	71898838,71893778,71893177,71888116,71883736,71880558,71879837,71878231,71875838,71862611,71859796,71854569,71852260,71851358,71850167,71848968,71830311,71828026,71827043	Gene ID= ENSG00000066933.15 TPM= 2.12 Transcript Type= protein_coding
chr15	72043934	72118083	72043934	72118083	-	transcript2330.chr15.nic@MYO9A	transcript2330.chr15.nic	protein_coding	72117680,72043934	72118083,72046634	Gene ID= ENSG00000066933.15 TPM= 3.19 Transcript Type= NA
chr15	72118296	72143688	72118296	72143688	+	ENST00000340912.5@SENP8	ENST00000340912.5	protein_coding	72118296,72139577	72118464,72143688	Gene ID= ENSG00000166192.14 TPM= 12.75 Transcript Type= protein_coding
chr15	72199032	72231171	72199032	72231171	-	ENST00000565184.5@PKM	ENST00000565184.5	protein_coding	72230896,72218944,72217409,72210347,72209673,72208621,72207127,72206728,72203022,72200474,72199032	72231171,72219110,72217500,72210478,72209859,72208891,72207277,72206880,72203188,72200655,72199756	Gene ID= ENSG00000067225.17 TPM= 56.27 Transcript Type= protein_coding
chr15	72199032	72231206	72199032	72231206	-	ENST00000335181.9@PKM	ENST00000335181.9	protein_coding	72231116,72218944,72217409,72210347,72209673,72208621,72207127,72206728,72202454,72200474,72199032	72231206,72219110,72217500,72210478,72209859,72208891,72207277,72206880,72202620,72200655,72199756	Gene ID= ENSG00000067225.17 TPM= 989.73 Transcript Type= protein_coding
chr15	72232000	72232204	72232000	72232204	+	transcript2398.chr15.nnic@NA	transcript2398.chr15.nnic	NA	72232000	72232204	Gene ID= novel_gene_chr15_2399 TPM= 4.25 Transcript Type= NA
chr15	72241181	72272553	72241181	72272553	-	transcript2381.chr15.nic@PARP6	transcript2381.chr15.nic	protein_coding	72272393,72271023,72267475,72266745,72265897,72265413,72265081,72264555,72261558,72260538,72259608,72258037,72257348,72256465,72254455,72253437,72251207,72250845,72250020,72249245,72242620,72242157,72241901,72241181	72272553,72271287,72267671,72266822,72265991,72265473,72265171,72264621,72261707,72260688,72259661,72258132,72257440,72256590,72254520,72253504,72251255,72250957,72250092,72249314,72242699,72242220,72241985,72241557	Gene ID= ENSG00000137817.16 TPM= 2.3 Transcript Type= NA
chr15	72241181	72272554	72241181	72272554	-	transcript2384.chr15.nic@PARP6	transcript2384.chr15.nic	protein_coding	72272393,72271023,72267475,72266745,72265897,72265413,72265081,72264555,72261558,72260478,72259608,72258037,72257348,72256465,72254455,72253437,72251207,72250845,72250020,72242620,72242157,72241901,72241181	72272554,72271287,72267671,72266822,72265991,72265473,72265171,72264621,72261707,72260688,72259661,72258132,72257440,72256590,72254520,72253504,72251255,72250954,72250092,72242699,72242220,72241985,72241557	Gene ID= ENSG00000137817.16 TPM= 2.84 Transcript Type= NA
chr15	72241181	72272554	72241181	72272554	-	transcript2387.chr15.nic@PARP6	transcript2387.chr15.nic	protein_coding	72272393,72271023,72267475,72266745,72265897,72265413,72265081,72264555,72261558,72260538,72259608,72258037,72257348,72256465,72254455,72253437,72251207,72250845,72250020,72242620,72242157,72241901,72241181	72272554,72271287,72267671,72266822,72265991,72265473,72265171,72264621,72261707,72260688,72259661,72258132,72257440,72256590,72254520,72253504,72251255,72250954,72250092,72242699,72242220,72241985,72241557	Gene ID= ENSG00000137817.16 TPM= 2.84 Transcript Type= NA
chr15	72241181	72272642	72241181	72272642	-	transcript2391.chr15.nic@PARP6	transcript2391.chr15.nic	protein_coding	72272281,72271023,72267475,72266745,72265897,72265413,72265081,72264555,72261558,72260538,72259608,72258037,72257348,72256465,72254455,72253437,72251207,72250845,72250020,72242620,72242157,72241901,72241181	72272642,72271287,72267671,72266822,72265991,72265473,72265171,72264621,72261707,72260688,72259661,72258132,72257440,72256590,72254520,72253504,72251255,72250957,72250092,72242699,72242220,72241985,72241557	Gene ID= ENSG00000137817.16 TPM= 3.9 Transcript Type= NA
chr15	72241181	72272554	72241181	72272554	-	transcript2394.chr15.nic@PARP6	transcript2394.chr15.nic	protein_coding	72272393,72271023,72267475,72266745,72265897,72265413,72265081,72264555,72261558,72260538,72259608,72258037,72257348,72256465,72254455,72253437,72251207,72250020,72242620,72242157,72241901,72241181	72272554,72271287,72267671,72266822,72265991,72265473,72265171,72264621,72261707,72260688,72259661,72258132,72257440,72256590,72254520,72253504,72251255,72250092,72242699,72242220,72241985,72241557	Gene ID= ENSG00000137817.16 TPM= 5.49 Transcript Type= NA
chr15	72340919	72376476	72340919	72376476	-	ENST00000268097.9@HEXA	ENST00000268097.9	protein_coding	72375720,72356525,72355559,72353691,72353068,72351133,72350518,72349079,72348048,72347686,72346527,72346235,72345446,72340919	72376476,72356617,72355624,72353737,72353178,72351234,72350650,72349259,72348134,72347758,72346710,72346325,72345550,72344140	Gene ID= ENSG00000213614.9 TPM= 20.18 Transcript Type= protein_coding
chr15	72343926	72375993	72343926	72375993	-	ENST00000566304.5@HEXA	ENST00000566304.5	protein_coding	72375720,72356525,72355559,72353691,72353068,72351133,72350518,72349079,72348048,72347686,72346527,72346235,72345446,72343926	72375993,72356650,72355624,72353737,72353178,72351234,72350650,72349259,72348134,72347758,72346710,72346325,72345550,72344140	Gene ID= ENSG00000213614.9 TPM= 2.12 Transcript Type= protein_coding
chr15	72472844	72475168	72472844	72475168	-	ENST00000565181.1@TMEM202-AS1	ENST00000565181.1	lincRNA	72472844	72475168	Gene ID= ENSG00000261423.1 TPM= 2.12 Transcript Type= lincRNA
chr15	72474311	72584009	72474311	72584009	+	transcript2413.chr15.nic@ARIH1	transcript2413.chr15.nic	protein_coding	72474311,72518067,72544820,72555271,72555852,72561483,72563394,72566563,72567106,72570177,72572108,72580731,72582075,72583208	72475014,72518134,72544964,72555363,72555907,72561549,72563500,72566605,72567177,72570307,72572165,72580877,72582187,72584009	Gene ID= ENSG00000166233.14 TPM= 5.31 Transcript Type= NA
chr15	72534961	72538605	72534961	72538605	-	transcript2424.chr15.nnic@NA	transcript2424.chr15.nnic	NA	72534961	72538605	Gene ID= novel_gene_chr15_2425 TPM= 3.19 Transcript Type= NA
chr15	72686187	72738476	72686187	72738476	+	ENST00000268057.8@BBS4	ENST00000268057.8	protein_coding	72686187,72695177,72709700,72712244,72715291,72716778,72722794,72724528,72727940,72729616,72731305,72731555,72735113,72735825,72736762,72737478	72686251,72695228,72709779,72712307,72715402,72716850,72722847,72724655,72727994,72729684,72731457,72731726,72735182,72735966,72736963,72738476	Gene ID= ENSG00000140463.13 TPM= 14.87 Transcript Type= protein_coding
chr15	72751369	72783731	72751369	72783731	-	ENST00000567941.5@ADPGK	ENST00000567941.5	protein_coding	72783246,72774872,72771783,72760407,72756251,72755556,72751369	72783731,72775097,72771845,72760527,72756447,72755654,72752892	Gene ID= ENSG00000159322.17 TPM= 2.66 Transcript Type= nonsense_mediated_decay
chr15	72751369	72783785	72751369	72783785	-	ENST00000311669.12@ADPGK	ENST00000311669.12	protein_coding	72783459,72774872,72771783,72760407,72756251,72755556,72751369	72783785,72775097,72771845,72760527,72756447,72755654,72752892	Gene ID= ENSG00000159322.17 TPM= 13.28 Transcript Type= protein_coding
chr15	73135985	73305198	73135985	73305198	+	ENST00000560328.1@NEO1	ENST00000560328.1	protein_coding	73135985,73176403,73178307,73236287,73244344,73249060,73249583,73253400,73254682,73258766,73260271,73266316,73270058,73270316,73272455,73273811,73278131,73282964,73288313,73289146,73293390,73298348,73301321,73302613	73136027,73176557,73178427,73236506,73244498,73249208,73249721,73253449,73254829,73258876,73260465,73266411,73270233,73270454,73272562,73274005,73278199,73283111,73288551,73289238,73293548,73298611,73301457,73305198	Gene ID= ENSG00000067141.16 TPM= 1.06 Transcript Type= protein_coding
chr15	73560014	73633413	73560014	73633413	-	ENST00000345330.8@NPTN	ENST00000345330.8	protein_coding	73633125,73597022,73591966,73587524,73573662,73570150,73563236,73561896,73560014	73633413,73597369,73592137,73587618,73573795,73570423,73563257,73561970,73561048	Gene ID= ENSG00000156642.16 TPM= 6.29 Transcript Type= protein_coding
chr15	73560014	73634134	73560014	73634134	-	ENST00000351217.10@NPTN	ENST00000351217.10	protein_coding	73633125,73591966,73587524,73573662,73570150,73563236,73561896,73560014	73634134,73592137,73587618,73573795,73570423,73563257,73561970,73561048	Gene ID= ENSG00000156642.16 TPM= 267.93 Transcript Type= protein_coding
chr15	73567003	73633378	73567003	73633378	-	transcript2457.chr15.nic@NPTN	transcript2457.chr15.nic	protein_coding	73633125,73591966,73587524,73573662,73567003	73633378,73592137,73587618,73573795,73570423	Gene ID= ENSG00000156642.16 TPM= 20.18 Transcript Type= NA
chr15	73684510	73714514	73684510	73714514	+	transcript2468.chr15.nic@CD276	transcript2468.chr15.nic	protein_coding	73684510,73699586,73702255,73702772,73703659,73704176,73708339,73709648,73711135,73712934	73684799,73699718,73702593,73703086,73703997,73704472,73708473,73709689,73711170,73714514	Gene ID= ENSG00000103855.17 TPM= 3.19 Transcript Type= NA
chr15	73684387	73714514	73684387	73714514	+	transcript2471.chr15.nnic@CD276	transcript2471.chr15.nnic	protein_coding	73684387,73699586,73702255,73703659,73704176,73708339,73709648,73711135,73712934	73684460,73699718,73702593,73703997,73704472,73708473,73709689,73711170,73714514	Gene ID= ENSG00000103855.17 TPM= 2.66 Transcript Type= NA
chr15	73684213	73714518	73684213	73714518	+	ENST00000318443.9@CD276	ENST00000318443.9	protein_coding	73684213,73699586,73702255,73702772,73703659,73704176,73708339,73709648,73711135,73712934	73684460,73699718,73702593,73703086,73703997,73704472,73708473,73709689,73711170,73714518	Gene ID= ENSG00000103855.17 TPM= 26.02 Transcript Type= protein_coding
chr15	73684391	73712154	73684391	73712154	+	ENST00000561213.5@CD276	ENST00000561213.5	protein_coding	73684391,73699586,73702255,73702772,73703659,73704176,73708339,73709648,73711135	73684460,73699718,73702593,73703086,73703997,73704472,73708473,73709689,73712154	Gene ID= ENSG00000103855.17 TPM= 1.06 Transcript Type= protein_coding
chr15	73711132	73714514	73711132	73714514	+	ENST00000559465.1@CD276	ENST00000559465.1	protein_coding	73711132,73712934	73711170,73714514	Gene ID= ENSG00000103855.17 TPM= 12.75 Transcript Type= retained_intron
chr15	73739800	73753352	73739800	73753352	-	transcript2474.chr15.nic@C15orf59	transcript2474.chr15.nic	protein_coding	73752110,73750975,73740568,73739800	73753352,73751697,73740642,73740476	Gene ID= ENSG00000205363.5 TPM= 11.68 Transcript Type= NA
chr15	73739800	73753336	73739800	73753336	-	transcript2475.chr15.nnic@C15orf59	transcript2475.chr15.nnic	protein_coding	73752110,73750975,73740568,73739800	73753336,73751862,73740642,73740476	Gene ID= ENSG00000205363.5 TPM= 7.44 Transcript Type= NA
chr15	73739802	73753239	73739802	73753239	-	transcript2480.chr15.nnic@C15orf59	transcript2480.chr15.nnic	protein_coding	73752110,73750975,73739802	73753239,73751862,73740642	Gene ID= ENSG00000205363.5 TPM= 11.68 Transcript Type= NA
chr15	73926458	73952137	73926458	73952137	+	ENST00000261921.7@LOXL1	ENST00000261921.7	protein_coding	73926458,73942854,73946417,73947067,73947807,73949459,73951831	73927885,73942962,73946554,73947223,73947902,73949574,73952137	Gene ID= ENSG00000129038.15 TPM= 42.49 Transcript Type= protein_coding
chr15	73928510	73932810	73928510	73932810	-	transcript2489.chr15.nnic@NA	transcript2489.chr15.nnic	NA	73928510	73932810	Gene ID= novel_gene_chr15_2490 TPM= 2.12 Transcript Type= NA
chr15	73978923	73992348	73978923	73992348	-	ENST00000541638.5@STOML1	ENST00000541638.5	protein_coding	73992091,73990351,73989108,73988599,73985318,73984659,73978923	73992348,73990457,73989257,73988802,73985513,73984871,73984130	Gene ID= ENSG00000067221.13 TPM= 22.31 Transcript Type= protein_coding
chr15	73983218	73992348	73983218	73992348	-	ENST00000316911.10@STOML1	ENST00000316911.10	protein_coding	73992091,73990351,73988599,73985318,73984659,73983218	73992348,73990457,73988802,73985513,73984871,73984130	Gene ID= ENSG00000067221.13 TPM= 23.9 Transcript Type= protein_coding
chr15	73983206	73992297	73983206	73992297	-	ENST00000564777.5@STOML1	ENST00000564777.5	protein_coding	73992091,73990351,73988599,73985318,73984659,73983206	73992297,73990457,73988802,73985513,73984868,73984130	Gene ID= ENSG00000067221.13 TPM= 10.09 Transcript Type= protein_coding
chr15	73994673	74043337	73994673	74043337	+	ENST00000395135.7@PML	ENST00000395135.7	protein_coding	73994673,73998004,74022828,74024857,74032572,74033156,74034478,74042989	73994941,73998476,74023408,74024927,74032715,74033414,74034530,74043337	Gene ID= ENSG00000140464.19 TPM= 4.07 Transcript Type= protein_coding
chr15	73994717	74036394	73994717	74036394	+	ENST00000268059.10@PML	ENST00000268059.10	protein_coding	73994717,73998004,74022828,74024857,74032572,74033156,74034478,74035172	73994941,73998476,74023408,74024927,74032715,74033414,74034530,74036394	Gene ID= ENSG00000140464.19 TPM= 11.5 Transcript Type= protein_coding
chr15	73994717	74046771	73994717	74046771	+	ENST00000268058.7@PML	ENST00000268058.7	protein_coding	73994717,73998004,74022828,74024857,74032572,74033156,74034478,74042989,74044221	73994941,73998476,74023408,74024927,74032715,74033414,74034530,74043139,74046771	Gene ID= ENSG00000140464.19 TPM= 10.97 Transcript Type= protein_coding
chr15	74173671	74176872	74173671	74176872	+	ENST00000249842.7@ISLR	ENST00000249842.7	protein_coding	74173671,74174851	74174019,74176872	Gene ID= ENSG00000129009.12 TPM= 9.03 Transcript Type= protein_coding
chr15	74174501	74176872	74174501	74176872	+	ENST00000395118.1@ISLR	ENST00000395118.1	protein_coding	74174501,74174851	74174653,74176872	Gene ID= ENSG00000129009.12 TPM= 7.97 Transcript Type= protein_coding
chr15	74337759	74366206	74337759	74366206	-	ENST00000358632.8@CYP11A1	ENST00000358632.8	protein_coding	74365716,74347900,74345044,74343789,74342977,74339587,74339237,74338571,74337759	74366206,74348055,74345243,74343992,74343137,74339753,74339315,74338768,74338103	Gene ID= ENSG00000140459.17 TPM= 8.5 Transcript Type= protein_coding
chr15	74409289	74434467	74409289	74434467	-	ENST00000261918.8@SEMA7A	ENST00000261918.8	protein_coding	74433741,74418801,74418268,74417877,74417591,74417335,74416575,74415801,74414838,74414547,74411885,74411556,74411295,74409289	74434467,74418952,74418309,74417969,74417675,74417445,74416714,74415985,74414946,74414745,74412012,74411710,74411356,74410985	Gene ID= ENSG00000138623.9 TPM= 2.12 Transcript Type= protein_coding
chr15	74445978	74461118	74445978	74461118	-	ENST00000564488.5@UBL7	ENST00000564488.5	protein_coding	74461037,74460668,74458684,74456552,74452296,74451436,74450802,74449936,74449626,74449186,74448478,74445978	74461118,74460778,74458896,74456671,74452378,74451520,74450859,74450069,74449675,74449353,74448600,74446227	Gene ID= ENSG00000138629.15 TPM= 2.66 Transcript Type= protein_coding
chr15	74445977	74461178	74445977	74461178	-	ENST00000395081.6@UBL7	ENST00000395081.6	protein_coding	74461037,74458684,74456552,74452296,74451436,74450802,74449936,74449626,74449186,74448478,74445977	74461178,74458896,74456671,74452378,74451520,74450859,74450069,74449675,74449353,74448600,74446227	Gene ID= ENSG00000138629.15 TPM= 22.2 Transcript Type= protein_coding
chr15	74445977	74461186	74445977	74461186	-	transcript2522.chr15.nnic@UBL7	transcript2522.chr15.nnic	protein_coding	74461158,74458684,74456552,74452296,74451436,74450802,74449936,74449626,74449186,74448478,74445977	74461186,74458896,74456671,74452378,74451520,74450859,74450069,74449675,74449353,74448600,74446227	Gene ID= ENSG00000138629.15 TPM= 17.95 Transcript Type= NA
chr15	74445977	74461182	74445977	74461182	-	ENST00000361351.8@UBL7	ENST00000361351.8	protein_coding	74461108,74458684,74456552,74452296,74451436,74450802,74449936,74449626,74449186,74448478,74445977	74461182,74458896,74456671,74452378,74451520,74450859,74450069,74449675,74449353,74448600,74446227	Gene ID= ENSG00000138629.15 TPM= 66.81 Transcript Type= protein_coding
chr15	74445977	74461102	74445977	74461102	-	ENST00000567435.5@UBL7	ENST00000567435.5	protein_coding	74460668,74458684,74456552,74452296,74451436,74450802,74449936,74449626,74449186,74448478,74445977	74461102,74458896,74456671,74452378,74451520,74450859,74450069,74449675,74449353,74448600,74446227	Gene ID= ENSG00000138629.15 TPM= 6.27 Transcript Type= protein_coding
chr15	74461265	74481302	74461265	74481302	+	ENST00000499217.6@UBL7-AS1	ENST00000499217.6	antisense_RNA	74461265,74466036,74479060,74481051	74462031,74466130,74479278,74481302	Gene ID= ENSG00000247240.7 TPM= 3.19 Transcript Type= antisense_RNA
chr15	74614994	74630126	74614994	74630126	+	ENST00000395066.7@CLK3	ENST00000395066.7	protein_coding	74614994,74619197,74620009,74622120,74622494,74624902,74625802,74627352,74627539,74627970,74628604,74628942,74629707	74615898,74619348,74620225,74622216,74622560,74625018,74625968,74627446,74627668,74628052,74628683,74629032,74630126	Gene ID= ENSG00000179335.18 TPM= 22.66 Transcript Type= protein_coding
chr15	74615804	74630116	74615804	74630116	+	transcript2540.chr15.nic@CLK3	transcript2540.chr15.nic	protein_coding	74615804,74619197,74620009,74622494,74624902,74625802,74627352,74627539,74627970,74628604,74628942,74629707	74615898,74619348,74620225,74622560,74625018,74625968,74627446,74627668,74628052,74628683,74629032,74630116	Gene ID= ENSG00000179335.18 TPM= 6.72 Transcript Type= NA
chr15	74615804	74630118	74615804	74630118	+	transcript2543.chr15.nic@CLK3	transcript2543.chr15.nic	protein_coding	74615804,74619197,74620009,74622494,74624902,74625802,74627352,74627539,74627970,74628604,74628942	74615898,74619348,74620225,74622560,74625018,74625968,74627446,74627668,74628052,74628683,74630118	Gene ID= ENSG00000179335.18 TPM= 3.19 Transcript Type= NA
chr15	74615804	74630116	74615804	74630116	+	transcript2545.chr15.nic@CLK3	transcript2545.chr15.nic	protein_coding	74615804,74619197,74620009,74624902,74625802,74627352,74627539,74627970,74628604,74628942,74629707	74615898,74619348,74622560,74625018,74625968,74627446,74627668,74628052,74628683,74629032,74630116	Gene ID= ENSG00000179335.18 TPM= 4.6 Transcript Type= NA
chr15	74629161	74630118	74629161	74630118	+	ENST00000568232.1@CLK3	ENST00000568232.1	protein_coding	74629161	74630118	Gene ID= ENSG00000179335.18 TPM= 3.19 Transcript Type= retained_intron
chr15	74630558	74696043	74630558	74696043	-	ENST00000315127.8@EDC3	ENST00000315127.8	protein_coding	74695880,74674961,74671455,74655733,74640466,74635409,74630558	74696043,74675142,74671774,74656068,74640619,74635626,74632946	Gene ID= ENSG00000179151.11 TPM= 15.93 Transcript Type= protein_coding
chr15	74638327	74696045	74638327	74696045	-	transcript2563.chr15.nic@EDC3	transcript2563.chr15.nic	protein_coding	74695880,74674961,74671455,74655733,74638327	74696045,74675142,74671774,74656068,74640619	Gene ID= ENSG00000179151.11 TPM= 5.31 Transcript Type= NA
chr15	74632542	74696000	74632542	74696000	-	ENST00000568176.5@EDC3	ENST00000568176.5	protein_coding	74695880,74687091,74674961,74671455,74655733,74640466,74635409,74632542	74696000,74687179,74675142,74671774,74656068,74640619,74635626,74632946	Gene ID= ENSG00000179151.11 TPM= 2.12 Transcript Type= protein_coding
chr15	74782057	74803198	74782057	74803198	+	ENST00000220003.13@CSK	ENST00000220003.13	protein_coding	74782057,74798233,74798615,74798826,74799272,74800412,74800681,74800823,74801012,74801522,74801695,74801997,74802331	74782720,74798312,74798728,74798938,74799491,74800505,74800746,74800922,74801102,74801595,74801890,74802083,74803198	Gene ID= ENSG00000103653.16 TPM= 27.62 Transcript Type= protein_coding
chr15	74786001	74791590	74786001	74791590	-	transcript2569.chr15.nnic@NA	transcript2569.chr15.nnic	NA	74786001	74791590	Gene ID= novel_gene_chr15_2570 TPM= 15.93 Transcript Type= NA
chr15	74812949	74825754	74812949	74825754	+	transcript2573.chr15.nic@LMAN1L	transcript2573.chr15.nic	protein_coding	74812949,74816157,74816427,74816632,74818718,74819152,74821075,74821829,74822642,74825476	74813029,74816311,74816534,74816690,74818817,74820767,74821226,74821900,74822709,74825754	Gene ID= ENSG00000140506.16 TPM= 2.12 Transcript Type= NA
chr15	74836118	74843155	74836118	74843155	-	transcript2582.chr15.nic@ULK3	transcript2582.chr15.nic	protein_coding	74843004,74842075,74841405,74840498,74840234,74839558,74839268,74839010,74838643,74838440,74838266,74838152,74837751,74837369,74836118	74843155,74842420,74841509,74840641,74840316,74839713,74839373,74839050,74838745,74838504,74838344,74838192,74837798,74837435,74837244	Gene ID= ENSG00000140474.12 TPM= 8.41 Transcript Type= NA
chr15	74836118	74843346	74836118	74843346	-	ENST00000570276.5@ULK3	ENST00000570276.5	protein_coding	74843004,74842280,74842075,74841405,74840234,74839558,74839268,74839010,74838643,74838440,74838266,74838152,74837751,74837369,74836118	74843346,74842420,74842195,74841509,74840641,74839713,74839373,74839050,74838745,74838504,74838344,74838192,74837798,74837435,74837244	Gene ID= ENSG00000140474.12 TPM= 15.85 Transcript Type= retained_intron
chr15	74836118	74843147	74836118	74843147	-	transcript2590.chr15.nic@ULK3	transcript2590.chr15.nic	protein_coding	74843004,74842280,74842075,74841405,74840234,74839558,74839268,74839010,74838643,74838440,74838266,74837751,74837369,74836118	74843147,74842420,74842195,74841509,74840641,74839713,74839373,74839050,74838745,74838504,74838344,74838192,74837435,74837244	Gene ID= ENSG00000140474.12 TPM= 4.51 Transcript Type= NA
chr15	74836116	74843197	74836116	74843197	-	ENST00000440863.6@ULK3	ENST00000440863.6	protein_coding	74843004,74842280,74842075,74841405,74840498,74840234,74839558,74839268,74839010,74838643,74838440,74838266,74838152,74837751,74837369,74836116	74843197,74842420,74842195,74841509,74840641,74840316,74839713,74839373,74839050,74838745,74838504,74838344,74838192,74837798,74837435,74837244	Gene ID= ENSG00000140474.12 TPM= 45.59 Transcript Type= protein_coding
chr15	74843730	74873378	74843730	74873378	-	transcript2596.chr15.nnic@SCAMP2	transcript2596.chr15.nnic	protein_coding	74873199,74854581,74854021,74852069,74851353,74850514,74848600,74845473,74844893,74843730	74873378,74854649,74854119,74852186,74851481,74850673,74848701,74845593,74845217,74843794	Gene ID= ENSG00000140497.16 TPM= 2.12 Transcript Type= NA
chr15	74844855	74873365	74844855	74873365	-	ENST00000563829.5@SCAMP2	ENST00000563829.5	protein_coding	74873199,74854581,74852069,74851353,74850514,74848600,74845473,74844855	74873365,74854649,74854119,74851481,74850673,74848701,74845593,74845217	Gene ID= ENSG00000140497.16 TPM= 7.44 Transcript Type= retained_intron
chr15	74843730	74873365	74843730	74873365	-	ENST00000268099.13@SCAMP2	ENST00000268099.13	protein_coding	74873199,74854581,74854021,74852069,74851353,74850514,74848600,74845473,74843730	74873365,74854649,74854119,74852186,74851481,74850673,74848701,74845593,74845217	Gene ID= ENSG00000140497.16 TPM= 19.12 Transcript Type= protein_coding
chr15	74890007	74902219	74890007	74902219	+	ENST00000352410.8@MPI	ENST00000352410.8	protein_coding	74890007,74890527,74891379,74892661,74893138,74896152,74897011,74897512	74890089,74890654,74891579,74892802,74893320,74896325,74897219,74902219	Gene ID= ENSG00000178802.17 TPM= 24.43 Transcript Type= protein_coding
chr15	74895434	74898228	74895434	74898228	+	ENST00000566556.1@MPI	ENST00000566556.1	protein_coding	74895434	74898228	Gene ID= ENSG00000178802.17 TPM= 6.37 Transcript Type= retained_intron
chr15	74899992	74906806	74899992	74906806	-	transcript2616.chr15.nic@FAM219B	transcript2616.chr15.nic	protein_coding	74906587,74906278,74905154,74904982,74904664,74902604,74899992	74906806,74906365,74905231,74905059,74904712,74902786,74902063	Gene ID= ENSG00000178761.14 TPM= 4.51 Transcript Type= NA
chr15	74899987	74907121	74899987	74907121	-	ENST00000357635.9@FAM219B	ENST00000357635.9	protein_coding	74906587,74906278,74905154,74904664,74899987	74907121,74906365,74905231,74904712,74902786	Gene ID= ENSG00000178761.14 TPM= 32.13 Transcript Type= protein_coding
chr15	74899992	74906883	74899992	74906883	-	ENST00000569524.5@FAM219B	ENST00000569524.5	protein_coding	74906587,74905154,74904664,74899992	74906883,74905231,74904712,74902786	Gene ID= ENSG00000178761.14 TPM= 13.01 Transcript Type= nonsense_mediated_decay
chr15	74899992	74906793	74899992	74906793	-	ENST00000563671.5@FAM219B	ENST00000563671.5	protein_coding	74906587,74906278,74905154,74904664,74902604,74901950,74899992	74906793,74906365,74905231,74904712,74902786,74902063,74900137	Gene ID= ENSG00000178761.14 TPM= 2.12 Transcript Type= nonsense_mediated_decay
chr15	74899992	74906837	74899992	74906837	-	ENST00000563119.5@FAM219B	ENST00000563119.5	protein_coding	74906587,74906278,74905154,74904664,74902604,74899992	74906837,74906365,74905231,74904712,74902786,74902063	Gene ID= ENSG00000178761.14 TPM= 3.45 Transcript Type= protein_coding
chr15	74919791	74938168	74919791	74938168	-	ENST00000322347.10@COX5A	ENST00000322347.10	protein_coding	74937915,74929116,74926766,74923648,74919791	74938168,74929232,74926887,74923770,74920442	Gene ID= ENSG00000178741.11 TPM= 34.52 Transcript Type= protein_coding
chr15	74920275	74938080	74920275	74938080	-	ENST00000567270.5@COX5A	ENST00000567270.5	protein_coding	74937915,74926766,74923648,74920275	74938080,74926887,74923770,74920442	Gene ID= ENSG00000178741.11 TPM= 15.14 Transcript Type= protein_coding
chr15	74920280	74938083	74920280	74938083	-	ENST00000568783.5@COX5A	ENST00000568783.5	protein_coding	74937915,74929116,74926766,74920280	74938083,74929232,74926887,74920442	Gene ID= ENSG00000178741.11 TPM= 5.05 Transcript Type= protein_coding
chr15	74920275	74938070	74920275	74938070	-	ENST00000562233.5@COX5A	ENST00000562233.5	protein_coding	74937915,74929116,74920275	74938070,74929232,74920442	Gene ID= ENSG00000178741.11 TPM= 7.17 Transcript Type= protein_coding
chr15	74954416	74957464	74954416	74957464	-	ENST00000322177.5@RPP25	ENST00000322177.5	protein_coding	74954416	74957464	Gene ID= ENSG00000178718.6 TPM= 1.06 Transcript Type= protein_coding
chr15	75023555	75050726	75023555	75050726	+	ENST00000342932.7@PPCDC	ENST00000342932.7	protein_coding	75023555,75028247,75043441,75044386,75048553,75049150	75023626,75028453,75043536,75044514,75048721,75050726	Gene ID= ENSG00000138621.11 TPM= 4.25 Transcript Type= protein_coding
chr15	75207006	75211521	75207006	75211521	+	transcript2651.chr15.nic@C15orf39	transcript2651.chr15.nic	protein_coding	75207006,75210749	75208824,75211521	Gene ID= ENSG00000167173.18 TPM= 10.62 Transcript Type= NA
chr15	75206049	75212169	75206049	75212169	+	ENST00000567617.1@C15orf39	ENST00000567617.1	protein_coding	75206049,75210749	75208876,75212169	Gene ID= ENSG00000167173.18 TPM= 9.56 Transcript Type= protein_coding
chr15	75335891	75340273	75335891	75340273	+	ENST00000267935.12@COMMD4	ENST00000267935.12	protein_coding	75335891,75338062,75338355,75338646,75338985,75339264,75339702,75339965	75336092,75338133,75338420,75338685,75339104,75339344,75339878,75340273	Gene ID= ENSG00000140365.15 TPM= 25.67 Transcript Type= protein_coding
chr15	75336084	75340273	75336084	75340273	+	transcript2657.chr15.nnic@COMMD4	transcript2657.chr15.nnic	protein_coding	75336084,75338062,75338355,75338646,75338985,75339264,75339702,75339965	75336174,75338133,75338420,75338685,75339104,75339344,75339878,75340273	Gene ID= ENSG00000140365.15 TPM= 3.37 Transcript Type= NA
chr15	75336059	75340273	75336059	75340273	+	ENST00000338995.10@COMMD4	ENST00000338995.10	protein_coding	75336059,75338062,75338355,75338646,75338985,75339264,75339965	75336092,75338133,75338420,75338685,75339104,75339344,75340273	Gene ID= ENSG00000140365.15 TPM= 1.77 Transcript Type= protein_coding
chr15	75346990	75357114	75346990	75357114	+	ENST00000355059.8@NEIL1	ENST00000355059.8	protein_coding	75346990,75348884,75352111,75352324,75352602,75353739,75354250,75354431,75354653,75354964	75347473,75349339,75352230,75352387,75352701,75353866,75354277,75354492,75354818,75357114	Gene ID= ENSG00000140398.13 TPM= 1.06 Transcript Type= protein_coding
chr15	75348260	75355245	75348260	75355245	+	transcript2687.chr15.nnic@NEIL1	transcript2687.chr15.nnic	protein_coding	75348260,75348884,75352111,75352324,75352602,75353739,75354250,75354431,75354653,75354964	75348334,75349339,75352230,75352387,75352701,75353866,75354277,75354492,75354818,75355245	Gene ID= ENSG00000140398.13 TPM= 2.12 Transcript Type= NA
chr15	75355792	75368630	75355792	75368630	-	ENST00000267978.9@MAN2C1	ENST00000267978.9	protein_coding	75368483,75368073,75367511,75366522,75364488,75363999,75362642,75362343,75361855,75361604,75361286,75361046,75360565,75360090,75359903,75359620,75359328,75359059,75358704,75358462,75358201,75356793,75356606,75356301,75356110,75355792	75368630,75368198,75367634,75366592,75364665,75364188,75362748,75362453,75361947,75361720,75361381,75361191,75360688,75360211,75359988,75359775,75359425,75359153,75358808,75358618,75358344,75356902,75356685,75356449,75356219,75356032	Gene ID= ENSG00000140400.16 TPM= 23.05 Transcript Type= protein_coding
chr15	75355792	75368621	75355792	75368621	-	transcript2665.chr15.nnic@MAN2C1	transcript2665.chr15.nnic	protein_coding	75368483,75368073,75367511,75366522,75364488,75363999,75362642,75362343,75361855,75361604,75361286,75361046,75360565,75360090,75359903,75359620,75359328,75359059,75358704,75358462,75358201,75356793,75356606,75356301,75356110,75355792	75368621,75368198,75367634,75366592,75364665,75364188,75362748,75362453,75361947,75361720,75361381,75361191,75360688,75360211,75359988,75359775,75359425,75359153,75358808,75358618,75358344,75356902,75356685,75356506,75356219,75356032	Gene ID= ENSG00000140400.16 TPM= 3.93 Transcript Type= NA
chr15	75355792	75368621	75355792	75368621	-	transcript2672.chr15.nic@MAN2C1	transcript2672.chr15.nic	protein_coding	75368483,75368073,75367511,75366522,75364488,75363999,75362642,75362343,75361855,75361604,75361286,75361046,75360565,75360090,75359903,75359059,75358704,75358462,75358201,75356793,75356606,75356301,75356110,75355792	75368621,75368198,75367634,75366592,75364665,75364188,75362748,75362453,75361947,75361720,75361381,75361191,75360688,75360211,75359988,75359775,75358808,75358618,75358344,75356902,75356685,75356449,75356219,75356032	Gene ID= ENSG00000140400.16 TPM= 6.59 Transcript Type= NA
chr15	75355792	75368626	75355792	75368626	-	transcript2676.chr15.nic@MAN2C1	transcript2676.chr15.nic	protein_coding	75368073,75367511,75366522,75364488,75363999,75362642,75362343,75361855,75361604,75361286,75361046,75360565,75360090,75359903,75359059,75358704,75358462,75358201,75356793,75356606,75356301,75356110,75355792	75368626,75367634,75366592,75364665,75364188,75362748,75362453,75361947,75361720,75361381,75361191,75360688,75360211,75359988,75359775,75358808,75358618,75358344,75356902,75356685,75356449,75356219,75356032	Gene ID= ENSG00000140400.16 TPM= 6.59 Transcript Type= NA
chr15	75355792	75368592	75355792	75368592	-	ENST00000569482.5@MAN2C1	ENST00000569482.5	protein_coding	75368483,75368073,75367511,75366522,75364488,75363999,75362642,75362343,75361855,75361604,75361286,75361046,75360565,75360090,75359903,75359620,75359328,75359059,75358704,75358462,75358201,75356793,75356606,75356301,75356110,75355792	75368592,75368198,75367634,75366592,75364665,75364188,75362748,75362453,75361947,75361720,75361381,75361191,75360688,75360211,75359988,75359775,75359425,75359153,75358808,75358618,75358344,75356902,75356685,75356380,75356219,75356032	Gene ID= ENSG00000140400.16 TPM= 6.9 Transcript Type= protein_coding
chr15	75355792	75368604	75355792	75368604	-	ENST00000563622.5@MAN2C1	ENST00000563622.5	protein_coding	75368483,75368073,75367511,75366522,75364488,75362343,75361855,75361604,75361286,75361046,75360565,75360090,75359903,75359620,75359328,75359059,75358704,75358462,75358201,75356793,75356606,75356301,75356110,75355792	75368604,75368198,75367634,75366592,75364665,75362453,75361947,75361720,75361381,75361191,75360688,75360211,75359988,75359775,75359425,75359153,75358808,75358618,75358344,75356902,75356685,75356449,75356219,75356032	Gene ID= ENSG00000140400.16 TPM= 8.18 Transcript Type= protein_coding
chr15	75369379	75451704	75369379	75451704	-	ENST00000394947.7@SIN3A	ENST00000394947.7	protein_coding	75451423,75430187,75422647,75414205,75412763,75411492,75410134,75409836,75407055,75401852,75400730,75400040,75396258,75394680,75392242,75389652,75384264,75381613,75380629,75375665,75369379	75451704,75430408,75422823,75414311,75413045,75411743,75410286,75409991,75407144,75401970,75400940,75400156,75396496,75394863,75392815,75389821,75384437,75381705,75380723,75375872,75372209	Gene ID= ENSG00000169375.15 TPM= 9.56 Transcript Type= protein_coding
chr15	75598083	75625794	75598083	75625794	-	ENST00000567134.5@SNUPN	ENST00000567134.5	protein_coding	75625666,75622342,75620894,75617408,75609890,75609558,75607216,75605150,75601138,75598083	75625794,75622490,75621056,75617552,75609994,75609651,75607313,75605227,75601218,75598681	Gene ID= ENSG00000169371.13 TPM= 3.19 Transcript Type= protein_coding
chr15	75598083	75625815	75598083	75625815	-	ENST00000308588.9@SNUPN	ENST00000308588.9	protein_coding	75625666,75620894,75617408,75609890,75609558,75607216,75605150,75601138,75598083	75625815,75621056,75617552,75609994,75609651,75607313,75605227,75601218,75598681	Gene ID= ENSG00000169371.13 TPM= 28.68 Transcript Type= protein_coding
chr15	75598122	75625693	75598122	75625693	-	ENST00000564675.5@SNUPN	ENST00000564675.5	protein_coding	75625336,75620894,75617408,75609890,75609558,75607216,75605150,75601138,75598122	75625693,75621056,75617552,75609994,75609651,75607313,75605227,75601218,75598681	Gene ID= ENSG00000169371.13 TPM= 6.37 Transcript Type= protein_coding
chr15	75639087	75640323	75639087	75640323	-	ENST00000403490.2@IMP3	ENST00000403490.2	protein_coding	75639087	75640323	Gene ID= ENSG00000177971.8 TPM= 83.91 Transcript Type= protein_coding
chr15	75647906	75662301	75647906	75662301	+	ENST00000308527.5@SNX33	ENST00000308527.5	protein_coding	75647906,75656962	75650573,75662301	Gene ID= ENSG00000173548.8 TPM= 4.25 Transcript Type= protein_coding
chr15	75674322	75712848	75674322	75712848	-	ENST00000308508.5@CSPG4	ENST00000308508.5	protein_coding	75712668,75693070,75687276,75685219,75684736,75682843,75682607,75682293,75677703,75674322	75712848,75693233,75690812,75685701,75684912,75683041,75682741,75682459,75677886,75677384	Gene ID= ENSG00000173546.7 TPM= 21.24 Transcript Type= protein_coding
chr15	75843360	75901039	75843360	75901039	+	transcript2714.chr15.nnic@UBE2Q2	transcript2714.chr15.nnic	protein_coding	75843360,75854386,75859878,75868951,75873428,75876187,75877961,75879098,75883366,75890435,75890919,75899427	75843846,75854487,75859982,75869010,75873568,75876271,75878021,75879188,75883424,75890483,75891014,75901039	Gene ID= ENSG00000140367.11 TPM= 3.45 Transcript Type= NA
chr15	75843370	75901044	75843370	75901044	+	transcript2722.chr15.nic@UBE2Q2	transcript2722.chr15.nic	protein_coding	75843370,75854386,75859878,75868951,75873428,75876187,75877961,75879098,75883366,75899427	75843846,75854487,75859982,75869010,75873568,75876271,75878021,75879188,75883424,75901044	Gene ID= ENSG00000140367.11 TPM= 3.45 Transcript Type= NA
chr15	75843307	75901044	75843307	75901044	+	ENST00000569423.5@UBE2Q2	ENST00000569423.5	protein_coding	75843307,75854386,75868951,75873428,75876187,75877961,75879098,75883366,75890435,75890919,75896995,75899427	75843846,75854487,75869010,75873568,75876271,75878021,75879188,75883424,75890483,75891014,75897061,75901044	Gene ID= ENSG00000140367.11 TPM= 28.41 Transcript Type= protein_coding
chr15	75843285	75901078	75843285	75901078	+	ENST00000267938.8@UBE2Q2	ENST00000267938.8	protein_coding	75843285,75854386,75859878,75868951,75873428,75876187,75877961,75879098,75883366,75890435,75890919,75896995,75899427	75843846,75854487,75859982,75869010,75873568,75876271,75878021,75879188,75883424,75890483,75891014,75897061,75901078	Gene ID= ENSG00000140367.11 TPM= 60.28 Transcript Type= protein_coding
chr15	75887568	75890571	75887568	75890571	-	transcript2733.chr15.nnic@NA	transcript2733.chr15.nnic	NA	75887568	75890571	Gene ID= novel_gene_chr15_2734 TPM= 3.19 Transcript Type= NA
chr15	75903859	75942510	75903859	75942510	+	ENST00000308275.7@FBXO22	ENST00000308275.7	protein_coding	75903859,75904491,75913203,75914110,75917230,75929884,75932685	75904103,75904629,75913290,75914205,75917394,75930049,75942510	Gene ID= ENSG00000167196.13 TPM= 18.06 Transcript Type= protein_coding
chr15	75903878	75930655	75903878	75930655	+	ENST00000453211.6@FBXO22	ENST00000453211.6	protein_coding	75903878,75904491,75913203,75914110,75917230,75929884	75904103,75904629,75913290,75914205,75917394,75930655	Gene ID= ENSG00000167196.13 TPM= 4.25 Transcript Type= protein_coding
chr15	76302559	76304677	76302559	76304677	+	transcript2771.chr15.nnic@NA	transcript2771.chr15.nnic	NA	76302559	76304677	Gene ID= novel_gene_chr15_2772 TPM= 3.19 Transcript Type= NA
chr15	76665685	76905417	76665685	76905417	-	transcript2777.chr15.nic@SCAPER	transcript2777.chr15.nic	protein_coding	76905299,76883812,76862416,76857809,76841734,76804533,76800248,76795280,76774855,76771742,76766918,76765563,76765337,76764961,76753808,76733229,76728595,76705903,76702850,76701758,76665685	76905417,76883876,76862533,76857879,76841931,76804633,76800364,76795440,76775117,76771954,76767088,76765638,76765454,76765072,76753948,76733384,76728737,76705984,76703002,76701865,76665789	Gene ID= ENSG00000140386.12 TPM= 3.19 Transcript Type= NA
chr15	76697043	76700271	76697043	76700271	-	transcript2789.chr15.nnic@NA	transcript2789.chr15.nnic	NA	76697043	76700271	Gene ID= novel_gene_chr15_2790 TPM= 2.12 Transcript Type= NA
chr15	76834460	76835274	76834460	76835274	+	transcript2787.chr15.nnic@NA	transcript2787.chr15.nnic	NA	76834460	76835274	Gene ID= novel_gene_chr15_2788 TPM= 2.12 Transcript Type= NA
chr15	76931619	76954392	76931619	76954392	+	ENST00000394885.7@RCN2	ENST00000394885.7	protein_coding	76931619,76932361,76935526,76943758,76947421,76948410,76949070	76931985,76932466,76935722,76943871,76947517,76948552,76954392	Gene ID= ENSG00000117906.13 TPM= 92.41 Transcript Type= protein_coding
chr15	77041404	77071228	77041404	77071228	-	ENST00000267970.8@TSPAN3	ENST00000267970.8	protein_coding	77070892,77056064,77055789,77054178,77052777,77052385,77041404	77071228,77056255,77055863,77054279,77052929,77052468,77046927	Gene ID= ENSG00000140391.14 TPM= 206.06 Transcript Type= protein_coding
chr15	77046060	77071122	77046060	77071122	-	ENST00000561277.5@TSPAN3	ENST00000561277.5	protein_coding	77071005,77056064,77055789,77054178,77052777,77052385,77046060	77071122,77056255,77055863,77054279,77052929,77052468,77046927	Gene ID= ENSG00000140391.14 TPM= 14.87 Transcript Type= protein_coding
chr15	77108158	77420153	77108158	77420153	-	transcript2816.chr15.nnic@PEAK1	transcript2816.chr15.nnic	protein_coding	77420006,77365163,77286419,77108158	77420153,77365225,77286504,77110146	Gene ID= ENSG00000173517.10 TPM= 7.44 Transcript Type= NA
chr15	77111361	77112935	77111361	77112935	-	transcript2823.chr15.nnic@NA	transcript2823.chr15.nnic	NA	77111361	77112935	Gene ID= novel_gene_chr15_2824 TPM= 2.12 Transcript Type= NA
chr15	77127070	77128094	77127070	77128094	+	transcript2821.chr15.nnic@NA	transcript2821.chr15.nnic	NA	77127070	77128094	Gene ID= novel_gene_chr15_2822 TPM= 2.12 Transcript Type= NA
chr15	77420447	77479604	77420447	77479604	+	transcript2805.chr15.nic@HMG20A	transcript2805.chr15.nic	protein_coding	77420447,77458404,77464240,77467095,77470910,77471783,77477555,77478295,77479179	77421004,77458496,77464387,77467307,77471042,77471814,77477630,77478510,77479604	Gene ID= ENSG00000140382.14 TPM= 13.81 Transcript Type= NA
chr15	77507844	77509918	77507844	77509918	+	transcript2825.chr15.nnic@NA	transcript2825.chr15.nnic	NA	77507844	77509918	Gene ID= novel_gene_chr15_2826 TPM= 2.12 Transcript Type= NA
chr15	77613027	77632490	77613027	77632490	-	ENST00000355300.6@LINGO1	ENST00000355300.6	protein_coding	77632310,77613027	77632490,77615900	Gene ID= ENSG00000169783.12 TPM= 5.31 Transcript Type= protein_coding
chr15	77908787	77911856	77908787	77911856	+	transcript2831.chr15.nnic@NA	transcript2831.chr15.nnic	NA	77908787	77911856	Gene ID= novel_gene_chr15_2832 TPM= 2.12 Transcript Type= NA
chr15	77994987	77999381	77994987	77999381	-	ENST00000418039.2@TBC1D2B	ENST00000418039.2	protein_coding	77994987	77999381	Gene ID= ENSG00000167202.11 TPM= 6.37 Transcript Type= retained_intron
chr15	78104649	78131356	78104649	78131356	-	transcript2834.chr15.nic@CIB2	transcript2834.chr15.nic	protein_coding	78131165,78123705,78120568,78111165,78109235,78105739,78104649	78131356,78123739,78120661,78111276,78109382,78105934,78105332	Gene ID= ENSG00000136425.12 TPM= 6.37 Transcript Type= NA
chr15	78104606	78131544	78104606	78131544	-	ENST00000258930.7@CIB2	ENST00000258930.7	protein_coding	78131165,78123705,78111165,78109235,78105739,78104606	78131544,78123739,78111276,78109382,78105934,78105332	Gene ID= ENSG00000136425.12 TPM= 28.68 Transcript Type= protein_coding
chr15	78149442	78170542	78149442	78170542	+	transcript2864.chr15.nnic@IDH3A	transcript2864.chr15.nnic	protein_coding	78149442,78155213,78157548,78160092,78161581,78162234,78163507,78163716,78164992,78166150,78168922	78149942,78155275,78157631,78160206,78161768,78162367,78163609,78163780,78165076,78166302,78170542	Gene ID= ENSG00000166411.13 TPM= 13.84 Transcript Type= NA
chr15	78149321	78171949	78149321	78171949	+	ENST00000299518.6@IDH3A	ENST00000299518.6	protein_coding	78149321,78155213,78157548,78160092,78161581,78162234,78163507,78163716,78164992,78166150,78168922	78149430,78155275,78157631,78160206,78161768,78162367,78163609,78163780,78165076,78166302,78171949	Gene ID= ENSG00000166411.13 TPM= 9.56 Transcript Type= protein_coding
chr15	78149360	78169715	78149360	78169715	+	ENST00000560667.5@IDH3A	ENST00000560667.5	protein_coding	78149360,78155213,78156908,78157548,78160092,78161581,78162234,78163507,78163716,78164992,78166150,78168922	78149430,78155275,78157162,78157631,78160206,78161768,78162367,78163609,78163780,78165076,78166302,78169715	Gene ID= ENSG00000166411.13 TPM= 3.19 Transcript Type= nonsense_mediated_decay
chr15	78264086	78282196	78264086	78282196	+	ENST00000394855.7@DNAJA4	ENST00000394855.7	protein_coding	78264086,78264757,78270497,78273095,78274197,78275498,78280045,78280245	78264393,78264895,78270677,78273199,78274424,78275728,78280145,78282196	Gene ID= ENSG00000140403.12 TPM= 16.38 Transcript Type= protein_coding
chr15	78264562	78282196	78264562	78282196	+	ENST00000343789.7@DNAJA4	ENST00000343789.7	protein_coding	78264562,78264757,78270497,78273095,78274197,78275498,78280045,78280245	78264585,78264895,78270677,78273199,78274424,78275728,78280145,78282196	Gene ID= ENSG00000140403.12 TPM= 14.25 Transcript Type= protein_coding
chr15	78264574	78282192	78264574	78282192	+	ENST00000394852.7@DNAJA4	ENST00000394852.7	protein_coding	78264574,78270497,78273095,78274197,78275498,78280045,78280245	78264895,78270677,78273199,78274424,78275728,78280145,78282192	Gene ID= ENSG00000140403.12 TPM= 143.84 Transcript Type= protein_coding
chr15	78273660	78299643	78273660	78299643	-	transcript2870.chr15.nnic@WDR61	transcript2870.chr15.nnic	protein_coding	78299562,78295675,78294946,78293167,78292616,78289951,78289619,78288289,78286041,78285261,78278208,78273660	78299643,78295725,78294973,78293272,78292788,78290099,78289712,78288382,78286133,78285339,78278301,78274997	Gene ID= ENSG00000140395.8 TPM= 2.12 Transcript Type= NA
chr15	78283235	78299794	78283235	78299794	-	ENST00000267973.6@WDR61	ENST00000267973.6	protein_coding	78299562,78295675,78294946,78293167,78292616,78289951,78289619,78288289,78286041,78285261,78283235	78299794,78295725,78294973,78293272,78292788,78290099,78289712,78288382,78286133,78285339,78283521	Gene ID= ENSG00000140395.8 TPM= 45.67 Transcript Type= protein_coding
chr15	78283235	78299605	78283235	78299605	-	ENST00000558311.5@WDR61	ENST00000558311.5	protein_coding	78299562,78295675,78294946,78293167,78292616,78289951,78289619,78288289,78286041,78285261,78283235	78299605,78295793,78294973,78293272,78292788,78290099,78289712,78288382,78286133,78285339,78283521	Gene ID= ENSG00000140395.8 TPM= 3.19 Transcript Type= protein_coding
chr15	78438189	78501456	78438189	78501456	+	ENST00000258886.12@IREB2	ENST00000258886.12	protein_coding	78438189,78439795,78462922,78465251,78466271,78470532,78471741,78473242,78476188,78478297,78483318,78484761,78485705,78487733,78488180,78488647,78490422,78490619,78493909,78494142,78497126,78498033	78438356,78439881,78463087,78465388,78466489,78470601,78471924,78473381,78476359,78478397,78483434,78484920,78485840,78487817,78488336,78488771,78490526,78490761,78494056,78494264,78497311,78501456	Gene ID= ENSG00000136381.12 TPM= 13.81 Transcript Type= protein_coding
chr15	78507564	78537372	78507564	78537372	+	ENST00000408962.6@HYKK	ENST00000408962.6	protein_coding	78507564,78513084,78514968,78527380,78537300	78507671,78513425,78515107,78527563,78537372	Gene ID= ENSG00000188266.13 TPM= 1.06 Transcript Type= protein_coding
chr15	78540413	78552419	78540413	78552419	+	ENST00000044462.11@PSMA4	ENST00000044462.11	protein_coding	78540413,78541905,78542177,78542483,78544190,78544869,78545634,78546575,78548790	78540539,78541930,78542219,78542645,78544267,78544957,78545764,78546698,78552419	Gene ID= ENSG00000041357.15 TPM= 14.87 Transcript Type= protein_coding
chr15	78540421	78549186	78540421	78549186	+	ENST00000559082.5@PSMA4	ENST00000559082.5	protein_coding	78540421,78541905,78542177,78542483,78544190,78544869,78545634,78546575,78548790	78540463,78541930,78542219,78542645,78544267,78544957,78545764,78546698,78549186	Gene ID= ENSG00000041357.15 TPM= 2.66 Transcript Type= protein_coding
chr15	78540427	78549204	78540427	78549204	+	ENST00000413382.6@PSMA4	ENST00000413382.6	protein_coding	78540427,78541905,78542177,78544190,78544869,78545634,78546575,78548790	78540539,78541930,78542219,78544267,78544957,78545764,78546698,78549204	Gene ID= ENSG00000041357.15 TPM= 7.97 Transcript Type= protein_coding
chr15	78595305	78621179	78595305	78621179	-	ENST00000326828.5@CHRNA3	ENST00000326828.5	protein_coding	78620713,78618776,78618617,78617024,78601253,78595305	78621179,78618915,78618661,78617133,78602264,78596732	Gene ID= ENSG00000080644.15 TPM= 1.06 Transcript Type= protein_coding
chr15	78759203	78778509	78759203	78778509	-	transcript2914.chr15.nic@ADAMTS7	transcript2914.chr15.nic	protein_coding	78776188,78774624,78774167,78773083,78771585,78771162,78768133,78767379,78765645,78764555,78763926,78763699,78762403,78759203	78778509,78774793,78774300,78773203,78771829,78771303,78768259,78767592,78767051,78764707,78764099,78763845,78762565,78759578	Gene ID= ENSG00000136378.14 TPM= 3.19 Transcript Type= NA
chr15	78759203	78811431	78759203	78811431	-	ENST00000388820.4@ADAMTS7	ENST00000388820.4	protein_coding	78811121,78800192,78797948,78796590,78791140,78790670,78789689,78788231,78777444,78776749,78776188,78774624,78774167,78773083,78771585,78771162,78768133,78767379,78765645,78764555,78763926,78763699,78762403,78759203	78811431,78800547,78798113,78796786,78791223,78790794,78789838,78788374,78777588,78776841,78776333,78774793,78774300,78773203,78771829,78771303,78768259,78767592,78767051,78764707,78764099,78763845,78762565,78759578	Gene ID= ENSG00000136378.14 TPM= 22.31 Transcript Type= protein_coding
chr15	78759207	78763358	78759207	78763358	-	transcript2920.chr15.nnic@NA	transcript2920.chr15.nnic	NA	78759207	78763358	Gene ID= novel_gene_chr15_2921 TPM= 2.12 Transcript Type= NA
chr15	78807875	78811506	78807875	78811506	-	transcript2918.chr15.nnic@NA	transcript2918.chr15.nnic	NA	78807875	78811506	Gene ID= novel_gene_chr15_2919 TPM= 2.12 Transcript Type= NA
chr15	78845565	78848094	78845565	78848094	-	transcript2922.chr15.nnic@NA	transcript2922.chr15.nnic	NA	78845565	78848094	Gene ID= novel_gene_chr15_2923 TPM= 2.12 Transcript Type= NA
chr15	78872814	78898133	78872814	78898133	+	ENST00000331268.9@MORF4L1	ENST00000331268.9	protein_coding	78872814,78878213,78880512,78884967,78886141,78887269,78890989,78891484,78892212,78893539,78894058,78894820,78896983	78873057,78878259,78880579,78885083,78886227,78887349,78891014,78891572,78892313,78893627,78894230,78894904,78898133	Gene ID= ENSG00000185787.14 TPM= 1.06 Transcript Type= protein_coding
chr15	78872776	78897733	78872776	78897733	+	ENST00000426013.6@MORF4L1	ENST00000426013.6	protein_coding	78872776,78878213,78880512,78886141,78887269,78890989,78891484,78892212,78893539,78894058,78894820,78896983	78873057,78878259,78880579,78886227,78887349,78891014,78891572,78892313,78893627,78894230,78894904,78897733	Gene ID= ENSG00000185787.14 TPM= 332.46 Transcript Type= protein_coding
chr15	79311062	79322847	79311062	79322847	+	ENST00000299705.9@TMED3	ENST00000299705.9	protein_coding	79311062,79313757,79321978	79311417,79314005,79322847	Gene ID= ENSG00000166557.12 TPM= 56.29 Transcript Type= protein_coding
chr15	79845040	79897007	79845040	79897007	-	transcript2947.chr15.nnic@MTHFS	transcript2947.chr15.nnic	protein_coding	79896791,79889093,79846712,79845040	79897007,79889354,79846856,79845442	Gene ID= ENSG00000136371.10 TPM= 2.12 Transcript Type= NA
chr15	79844976	79897379	79844976	79897379	-	ENST00000559722.2@MTHFS	ENST00000559722.2	protein_coding	79897161,79889093,79844976	79897379,79889354,79845442	Gene ID= ENSG00000136371.10 TPM= 1.06 Transcript Type= protein_coding
chr15	79845044	79897007	79845044	79897007	-	transcript2957.chr15.nic@MTHFS	transcript2957.chr15.nic	protein_coding	79896791,79889093,79845044	79897007,79889354,79845442	Gene ID= ENSG00000136371.10 TPM= 5.31 Transcript Type= NA
chr15	79845040	79897014	79845040	79897014	-	transcript2963.chr15.nnic@MTHFS	transcript2963.chr15.nnic	protein_coding	79896872,79845040	79897014,79845442	Gene ID= ENSG00000136371.10 TPM= 3.19 Transcript Type= NA
chr15	79844976	79897049	79844976	79897049	-	ENST00000258874.3@MTHFS	ENST00000258874.3	protein_coding	79896872,79889093,79844976	79897049,79889354,79845442	Gene ID= ENSG00000136371.10 TPM= 7.44 Transcript Type= protein_coding
chr15	79898840	79923755	79898840	79923755	-	transcript2949.chr15.nnic@ST20	transcript2949.chr15.nnic	protein_coding	79923143,79914588,79907629,79898840	79923755,79914675,79907684,79899125	Gene ID= ENSG00000180953.11 TPM= 5.31 Transcript Type= NA
chr15	79898904	79923702	79898904	79923702	-	ENST00000485386.1@ST20	ENST00000485386.1	protein_coding	79923452,79907629,79898904	79923702,79907684,79899125	Gene ID= ENSG00000180953.11 TPM= 1.06 Transcript Type= protein_coding
chr15	79920276	79923754	79920276	79923754	-	transcript2966.chr15.nnic@NA	transcript2966.chr15.nnic	NA	79920276	79923754	Gene ID= novel_gene_chr15_2967 TPM= 4.25 Transcript Type= NA
chr15	79923138	79924851	79923138	79924851	+	transcript2964.chr15.nnic@NA	transcript2964.chr15.nnic	NA	79923138	79924851	Gene ID= novel_gene_chr15_2965 TPM= 3.19 Transcript Type= NA
chr15	79960889	79971446	79960889	79971446	-	ENST00000267953.3@BCL2A1	ENST00000267953.3	protein_coding	79970700,79960889	79971446,79961174	Gene ID= ENSG00000140379.7 TPM= 1.06 Transcript Type= protein_coding
chr15	80059568	80138393	80059568	80138393	+	ENST00000261749.10@ZFAND6	ENST00000261749.10	protein_coding	80059568,80098416,80120328,80121712,80122700,80131180,80137480	80059809,80098578,80120498,80121820,80122800,80131293,80138393	Gene ID= ENSG00000086666.18 TPM= 8.76 Transcript Type= protein_coding
chr15	80059568	80138392	80059568	80138392	+	ENST00000613266.4@ZFAND6	ENST00000613266.4	protein_coding	80059568,80075164,80120328,80121712,80122700,80131180,80137480	80059809,80075242,80120498,80121820,80122800,80131293,80138392	Gene ID= ENSG00000086666.18 TPM= 5.93 Transcript Type= protein_coding
chr15	80059919	80138379	80059919	80138379	+	transcript2975.chr15.nnic@ZFAND6	transcript2975.chr15.nnic	protein_coding	80059919,80098416,80120328,80121712,80122700,80131180,80137480	80059963,80098578,80120498,80121820,80122800,80131293,80138379	Gene ID= ENSG00000086666.18 TPM= 10.71 Transcript Type= NA
chr15	80059916	80138379	80059916	80138379	+	transcript2980.chr15.nnic@ZFAND6	transcript2980.chr15.nnic	protein_coding	80059916,80120328,80121712,80122700,80131180,80137480	80059963,80120498,80121820,80122800,80131293,80138379	Gene ID= ENSG00000086666.18 TPM= 11.77 Transcript Type= NA
chr15	80059714	80138360	80059714	80138360	+	ENST00000558494.5@ZFAND6	ENST00000558494.5	protein_coding	80059714,80120328,80121712,80122700,80131180,80137480	80059809,80120498,80121820,80122800,80131293,80138360	Gene ID= ENSG00000086666.18 TPM= 108.34 Transcript Type= protein_coding
chr15	80072578	80138360	80072578	80138360	+	ENST00000559835.5@ZFAND6	ENST00000559835.5	protein_coding	80072578,80120328,80121712,80122700,80131180,80137480	80072647,80120498,80121820,80122800,80131293,80138360	Gene ID= ENSG00000086666.18 TPM= 6.37 Transcript Type= protein_coding
chr15	80072583	80138358	80072583	80138358	+	ENST00000559775.5@ZFAND6	ENST00000559775.5	protein_coding	80072583,80098416,80120328,80121712,80122700,80131180,80137480	80072647,80098578,80120498,80121820,80122800,80131293,80138358	Gene ID= ENSG00000086666.18 TPM= 2.12 Transcript Type= protein_coding
chr15	80152780	80186946	80152780	80186946	+	ENST00000407106.5@FAH	ENST00000407106.5	protein_coding	80152780,80153026,80158060,80159756,80160410,80162246,80168052,80168264,80172149,80173014,80175016,80177537,80180124,80181042,80186130	80152905,80153135,80158170,80159877,80160459,80162336,80168149,80168316,80172248,80173144,80175091,80177583,80180225,80181159,80186946	Gene ID= ENSG00000103876.11 TPM= 10.62 Transcript Type= protein_coding
chr15	80152867	80163707	80152867	80163707	+	transcript2987.chr15.nic@FAH	transcript2987.chr15.nic	protein_coding	80152867,80153026,80158060,80159756,80160410,80162246	80152905,80153135,80158170,80159877,80160459,80163707	Gene ID= ENSG00000103876.11 TPM= 2.12 Transcript Type= NA
chr15	80152794	80186343	80152794	80186343	+	ENST00000261755.9@FAH	ENST00000261755.9	protein_coding	80152794,80153026,80158060,80159756,80160410,80162246,80168052,80168264,80172149,80173014,80175016,80177537,80180124,80181042,80186130	80152841,80153135,80158170,80159877,80160459,80162336,80168149,80168316,80172248,80173144,80175091,80177583,80180225,80181159,80186343	Gene ID= ENSG00000103876.11 TPM= 38.24 Transcript Type= protein_coding
chr15	80152897	80186340	80152897	80186340	+	ENST00000561421.5@FAH	ENST00000561421.5	protein_coding	80152897,80158060,80159756,80160410,80162246,80168052,80168264,80172149,80173014,80175016,80177537,80180124,80181042,80186130	80153135,80158170,80159877,80160459,80162336,80168149,80168316,80172248,80173144,80175091,80177583,80180225,80181159,80186340	Gene ID= ENSG00000103876.11 TPM= 11.68 Transcript Type= protein_coding
chr15	80197243	80204170	80197243	80204170	-	transcript2991.chr15.nic@CTXND1	transcript2991.chr15.nic	protein_coding	80203589,80197243	80204170,80202014	Gene ID= ENSG00000259417.2 TPM= 4.25 Transcript Type= NA
chr15	80695303	80755621	80695303	80755621	+	ENST00000258884.4@ABHD17C	ENST00000258884.4	protein_coding	80695303,80749513,80754151	80696019,80749692,80755621	Gene ID= ENSG00000136379.11 TPM= 20.18 Transcript Type= protein_coding
chr15	80975747	80989878	80975747	80989878	-	ENST00000261758.5@MESD	ENST00000261758.5	protein_coding	80989579,80981950,80975747	80989878,80982182,80979477	Gene ID= ENSG00000117899.10 TPM= 3.19 Transcript Type= protein_coding
chr15	80999011	81001745	80999011	81001745	-	transcript3008.chr15.nnic@NA	transcript3008.chr15.nnic	NA	80999011	81001745	Gene ID= novel_gene_chr15_3009 TPM= 7.44 Transcript Type= NA
chr15	81000866	81004001	81000866	81004001	+	transcript3006.chr15.nnic@NA	transcript3006.chr15.nnic	NA	81000866	81004001	Gene ID= novel_gene_chr15_3007 TPM= 20.18 Transcript Type= NA
chr15	81196879	81314058	81196879	81314058	+	ENST00000394660.6@IL16	ENST00000394660.6	protein_coding	81196879,81225299,81259772,81265659,81269538,81273090,81278817,81279558,81282639,81285698,81290453,81292556,81296928,81299380,81301344,81303549,81305908,81306423,81308605	81197137,81225711,81259880,81265801,81269648,81273204,81278890,81279774,81282756,81285830,81290540,81293037,81297078,81300475,81301512,81303650,81306166,81306545,81314058	Gene ID= ENSG00000172349.17 TPM= 2.12 Transcript Type= protein_coding
chr15	82130233	82262514	82130233	82262514	-	transcript3013.chr15.nnic@EFL1	transcript3013.chr15.nnic	protein_coding	82262137,82261688,82259088,82252691,82241270,82240418,82238307,82230848,82229034,82228191,82227450,82225165,82220078,82219652,82214717,82163853,82157713,82151465,82138658,82130233	82262514,82261797,82259155,82252775,82241403,82240555,82238521,82230971,82229110,82228327,82227572,82225264,82220229,82219818,82214855,82163984,82157860,82152423,82138842,82130561	Gene ID= ENSG00000140598.13 TPM= 3.19 Transcript Type= NA
chr15	82130230	82262763	82130230	82262763	-	ENST00000268206.11@EFL1	ENST00000268206.11	protein_coding	82262614,82261688,82259088,82252691,82241270,82240418,82238307,82230848,82229034,82228191,82227450,82225165,82220078,82219652,82214717,82163853,82157713,82151465,82138658,82130230	82262763,82261797,82259155,82252775,82241403,82240555,82238521,82230971,82229110,82228327,82227572,82225264,82220229,82219818,82214855,82163984,82157860,82152423,82138842,82130561	Gene ID= ENSG00000140598.13 TPM= 10.62 Transcript Type= protein_coding
chr15	82262827	82264881	82262827	82264881	+	ENST00000562097.5@SAXO2	ENST00000562097.5	protein_coding	82262827,82263139,82263359,82264673	82262932,82263188,82263438,82264881	Gene ID= ENSG00000188659.9 TPM= 1.06 Transcript Type= processed_transcript
chr15	82380132	82385554	82380132	82385554	+	transcript3038.chr15.nnic@NA	transcript3038.chr15.nnic	NA	82380132	82385554	Gene ID= novel_gene_chr15_3039 TPM= 5.31 Transcript Type= NA
chr15	82430045	82439153	82430045	82439153	+	ENST00000618706.1@GOLGA6L9	ENST00000618706.1	protein_coding	82430045,82433562,82434034,82434869,82435967,82436279	82432897,82433649,82434602,82434929,82436069,82439153	Gene ID= ENSG00000197978.9 TPM= 6.37 Transcript Type= retained_intron
chr15	82536753	82540564	82536753	82540564	-	ENST00000330244.10@RPS17	ENST00000330244.10	protein_coding	82540426,82539981,82538880,82538306,82536753	82540564,82540132,82538985,82538371,82536881	Gene ID= ENSG00000182774.10 TPM= 197.03 Transcript Type= protein_coding
chr15	82536755	82540457	82536755	82540457	-	ENST00000560229.5@RPS17	ENST00000560229.5	protein_coding	82539981,82538880,82538306,82536755	82540457,82538985,82538371,82536881	Gene ID= ENSG00000182774.10 TPM= 40.89 Transcript Type= retained_intron
chr15	82750572	82757204	82750572	82757204	+	ENST00000561107.5@SNHG21	ENST00000561107.5	antisense_RNA	82750572,82754629,82756730,82756904	82750848,82754784,82756785,82757204	Gene ID= ENSG00000250988.7 TPM= 1.06 Transcript Type= antisense_RNA
chr15	82750584	82757206	82750584	82757206	+	ENST00000559366.1@SNHG21	ENST00000559366.1	antisense_RNA	82750584,82754629,82756730,82756904,82757046	82750848,82754784,82756785,82756939,82757206	Gene ID= ENSG00000250988.7 TPM= 1.06 Transcript Type= antisense_RNA
chr15	82758086	82806070	82758086	82806070	-	transcript3049.chr15.nic@FSD2	transcript3049.chr15.nic	protein_coding	82805966,82796250,82786752,82786511,82782795,82780245,82778766,82772073,82769750,82768880,82765898,82765166,82762102,82758086	82806070,82796366,82787468,82786606,82783025,82780267,82778887,82772228,82769884,82769030,82766031,82765298,82762278,82759600	Gene ID= ENSG00000186628.12 TPM= 2.12 Transcript Type= NA
chr15	82776816	82806147	82776816	82806147	-	transcript3066.chr15.nic@FSD2	transcript3066.chr15.nic	protein_coding	82805966,82786752,82786511,82782795,82780245,82776816	82806147,82787468,82786606,82783025,82780267,82778887	Gene ID= ENSG00000186628.12 TPM= 3.19 Transcript Type= NA
chr15	82755362	82806069	82755362	82806069	-	ENST00000334574.12@FSD2	ENST00000334574.12	protein_coding	82805966,82786752,82786511,82782795,82780245,82778766,82772073,82769750,82768880,82765898,82765166,82762102,82755362	82806069,82787468,82786606,82783025,82780267,82778887,82772228,82769884,82769030,82766031,82765298,82762278,82759600	Gene ID= ENSG00000186628.12 TPM= 3.19 Transcript Type= protein_coding
chr15	82809602	82834657	82809602	82834657	+	transcript3073.chr15.nnic@WHAMM	transcript3073.chr15.nnic	protein_coding	82809602,82813103,82816692,82817920,82819323,82821711,82823100,82826410,82826751,82830599,82833229	82810335,82813276,82816842,82818089,82819488,82821839,82823287,82826496,82826846,82831079,82834657	Gene ID= ENSG00000156232.7 TPM= 2.12 Transcript Type= NA
chr15	82809602	82826496	82809602	82826496	+	transcript3080.chr15.nic@WHAMM	transcript3080.chr15.nic	protein_coding	82809602,82813103,82816692,82817920,82819323,82823100,82826410	82810335,82813276,82816842,82818089,82819488,82823287,82826496	Gene ID= ENSG00000156232.7 TPM= 2.12 Transcript Type= NA
chr15	82809628	82836108	82809628	82836108	+	ENST00000286760.5@WHAMM	ENST00000286760.5	protein_coding	82809628,82813103,82816692,82817920,82819323,82823100,82826410,82826751,82830599,82833229	82810335,82813276,82816842,82818089,82819488,82823287,82826496,82826846,82831079,82836108	Gene ID= ENSG00000156232.7 TPM= 5.31 Transcript Type= protein_coding
chr15	82848983	82952873	82848983	82952873	-	transcript3084.chr15.nnic@HOMER2	transcript3084.chr15.nnic	protein_coding	82952531,82952010,82892685,82875273,82864167,82859029,82854644,82852142,82851151,82848983	82952873,82952077,82892841,82875404,82864259,82859135,82854800,82852252,82851231,82849903	Gene ID= ENSG00000103942.12 TPM= 3.63 Transcript Type= NA
chr15	82848983	82952717	82848983	82952717	-	transcript3085.chr15.nnic@HOMER2	transcript3085.chr15.nnic	protein_coding	82952010,82892685,82875273,82864167,82859029,82854644,82852142,82851151,82848983	82952717,82892841,82875404,82864259,82859135,82854800,82852252,82851231,82849903	Gene ID= ENSG00000103942.12 TPM= 4.69 Transcript Type= NA
chr15	82848983	82952721	82848983	82952721	-	ENST00000450735.6@HOMER2	ENST00000450735.6	protein_coding	82952531,82892685,82875273,82864167,82859029,82854644,82852142,82851151,82848983	82952721,82892841,82875404,82864259,82859135,82854800,82852252,82851231,82849903	Gene ID= ENSG00000103942.12 TPM= 52.49 Transcript Type= protein_coding
chr15	82848983	82952728	82848983	82952728	-	ENST00000304231.12@HOMER2	ENST00000304231.12	protein_coding	82952531,82892685,82875273,82864167,82859029,82854644,82852142,82851151,82848983	82952728,82892841,82875404,82864259,82859168,82854800,82852252,82851231,82849903	Gene ID= ENSG00000103942.12 TPM= 2.92 Transcript Type= protein_coding
chr15	82986207	82991057	82986207	82991057	+	ENST00000304191.3@FAM103A1	ENST00000304191.3	protein_coding	82986207,82987336,82989010,82989881	82986369,82987384,82989188,82991057	Gene ID= ENSG00000169612.3 TPM= 1.06 Transcript Type= protein_coding
chr15	82994817	83011634	82994817	83011634	-	transcript3095.chr15.nnic@C15orf40	transcript3095.chr15.nnic	protein_coding	83011497,83010237,83008548,82994817	83011634,83010363,83008675,82995384	Gene ID= ENSG00000169609.13 TPM= 3.19 Transcript Type= NA
chr15	83004686	83011585	83004686	83011585	-	ENST00000508990.2@C15orf40	ENST00000508990.2	protein_coding	83011497,83010237,83008548,83004686	83011585,83010363,83008675,83004972	Gene ID= ENSG00000169609.13 TPM= 4.25 Transcript Type= protein_coding
chr15	82997216	82998993	82997216	82998993	-	transcript3106.chr15.nnic@NA	transcript3106.chr15.nnic	NA	82997216	82998993	Gene ID= novel_gene_chr15_3107 TPM= 2.12 Transcript Type= NA
chr15	83016422	83067246	83016422	83067246	-	transcript3108.chr15.nic@BTBD1	transcript3108.chr15.nic	protein_coding	83066751,83056389,83050073,83041728,83030136,83028616,83020675,83018707,83016422	83067246,83056545,83050178,83041925,83030328,83028728,83020762,83018853,83018225	Gene ID= ENSG00000064726.9 TPM= 8.71 Transcript Type= NA
chr15	83016422	83067354	83016422	83067354	-	ENST00000261721.8@BTBD1	ENST00000261721.8	protein_coding	83066751,83056389,83050073,83041728,83030136,83020675,83018707,83016422	83067354,83056545,83050178,83041925,83030328,83020762,83018853,83018225	Gene ID= ENSG00000064726.9 TPM= 369.84 Transcript Type= protein_coding
chr15	83107407	83137359	83107407	83137359	+	ENST00000322019.13@TM6SF1	ENST00000322019.13	protein_coding	83107407,83112797,83115845,83119578,83121921,83122757,83124672,83126755,83127358,83136481	83107772,83112900,83115942,83119681,83122003,83122878,83124776,83126847,83127477,83137359	Gene ID= ENSG00000136404.15 TPM= 5.31 Transcript Type= protein_coding
chr15	83653892	83898004	83653892	83898004	+	transcript3139.chr15.nic@ADAMTSL3	transcript3139.chr15.nic	protein_coding	83653892,83655729,83704389,83773523,83804650,83819811,83838089,83858766,83870802,83885101,83890109,83891329,83892684,83897858	83654276,83655830,83704508,83773650,83804695,83820047,83838215,83858840,83870959,83885212,83890247,83891379,83892888,83898004	Gene ID= ENSG00000156218.12 TPM= 4.25 Transcript Type= NA
chr15	84599423	84634237	84599423	84634237	-	transcript3188.chr15.nnic@AC048382.5	transcript3188.chr15.nnic	antisense_RNA	84633524,84631312,84606362,84603860,84599423	84634237,84632278,84606463,84603985,84599803	Gene ID= ENSG00000275120.2 TPM= 5.84 Transcript Type= NA
chr15	84639281	84654335	84639281	84654335	-	ENST00000434634.6@WDR73	ENST00000434634.6	protein_coding	84654234,84653632,84652714,84648537,84647890,84646184,84645471,84639281	84654335,84653699,84652802,84648625,84647954,84646348,84645836,84643723	Gene ID= ENSG00000177082.12 TPM= 6.37 Transcript Type= protein_coding
chr15	84651317	84652699	84651317	84652699	+	transcript3205.chr15.nnic@NA	transcript3205.chr15.nnic	NA	84651317	84652699	Gene ID= novel_gene_chr15_3206 TPM= 3.19 Transcript Type= NA
chr15	84655129	84658548	84655129	84658548	-	ENST00000360476.7@NMB	ENST00000360476.7	protein_coding	84657996,84657176,84655129	84658548,84657348,84655409	Gene ID= ENSG00000197696.9 TPM= 2.12 Transcript Type= protein_coding
chr15	84669560	84716163	84669560	84716163	-	ENST00000455959.7@SEC11A	ENST00000455959.7	protein_coding	84716025,84714731,84691535,84687625,84680713,84670725,84669560	84716163,84714866,84691644,84687774,84680832,84670782,84670069	Gene ID= ENSG00000140612.13 TPM= 1.06 Transcript Type= protein_coding
chr15	84669544	84716716	84669544	84716716	-	ENST00000268220.11@SEC11A	ENST00000268220.11	protein_coding	84716025,84691535,84687625,84680713,84670725,84669544	84716716,84691644,84687774,84680832,84670782,84670069	Gene ID= ENSG00000140612.13 TPM= 23.37 Transcript Type= protein_coding
chr15	84669544	84716111	84669544	84716111	-	ENST00000560266.5@SEC11A	ENST00000560266.5	protein_coding	84716025,84691535,84687625,84680713,84679932,84670725,84669544	84716111,84691644,84687774,84680832,84679969,84670782,84670069	Gene ID= ENSG00000140612.13 TPM= 11.68 Transcript Type= protein_coding
chr15	84779991	84781945	84779991	84781945	-	transcript3212.chr15.nnic@NA	transcript3212.chr15.nnic	NA	84779991	84781945	Gene ID= novel_gene_chr15_3213 TPM= 2.12 Transcript Type= NA
chr15	84800109	84803299	84800109	84803299	+	transcript3210.chr15.nnic@NA	transcript3210.chr15.nnic	NA	84800109	84803299	Gene ID= novel_gene_chr15_3211 TPM= 12.75 Transcript Type= NA
chr15	84816680	84873482	84816680	84873482	+	ENST00000258888.5@ALPK3	ENST00000258888.5	protein_coding	84816680,84823330,84827484,84838980,84839702,84856392,84859243,84859776,84860037,84862635,84863552,84864442,84867317,84868111	84817595,84823368,84827605,84839097,84840932,84858555,84859390,84859903,84860072,84862915,84863640,84864665,84867365,84873482	Gene ID= ENSG00000136383.6 TPM= 110.46 Transcript Type= protein_coding
chr15	84825190	84826658	84825190	84826658	-	transcript3229.chr15.nnic@NA	transcript3229.chr15.nnic	NA	84825190	84826658	Gene ID= novel_gene_chr15_3230 TPM= 2.12 Transcript Type= NA
chr15	84863847	84865945	84863847	84865945	+	transcript3221.chr15.nnic@NA	transcript3221.chr15.nnic	NA	84863847	84865945	Gene ID= novel_gene_chr15_3222 TPM= 2.12 Transcript Type= NA
chr15	84873889	84875711	84873889	84875711	+	transcript3227.chr15.nnic@NA	transcript3227.chr15.nnic	NA	84873889	84875711	Gene ID= novel_gene_chr15_3228 TPM= 2.12 Transcript Type= NA
chr15	84884654	84896046	84884654	84896046	+	ENST00000338602.6@SLC28A1	ENST00000338602.6	protein_coding	84884654,84886672,84887745,84888772,84890443,84894940,84895378	84884751,84886787,84887856,84888860,84890534,84895123,84896046	Gene ID= ENSG00000156222.11 TPM= 2.12 Transcript Type= protein_coding
chr15	85091903	85094817	85091903	85094817	-	transcript3243.chr15.nnic@NA	transcript3243.chr15.nnic	NA	85091903	85094817	Gene ID= novel_gene_chr15_3244 TPM= 92.41 Transcript Type= NA
chr15	85203443	85206767	85203443	85206767	-	transcript3245.chr15.nnic@NA	transcript3245.chr15.nnic	NA	85203443	85206767	Gene ID= novel_gene_chr15_3246 TPM= 4.25 Transcript Type= NA
chr15	85380565	85684874	85380565	85684874	+	transcript3254.chr15.nnic@AKAP13	transcript3254.chr15.nnic	protein_coding	85380565,85485710,85521428,85533584,85543772,85575131,85578930,85585702,85639374,85645818,85655417,85658537,85662388,85664563,85669722,85676976,85682158,85684741	85380798,85485753,85521575,85533880,85543955,85575329,85582107,85585823,85639449,85645954,85655787,85658590,85662453,85664755,85669830,85677098,85682212,85684874	Gene ID= ENSG00000170776.21 TPM= 6.2 Transcript Type= NA
chr15	85380565	85684874	85380565	85684874	+	transcript3258.chr15.nic@AKAP13	transcript3258.chr15.nic	protein_coding	85380565,85485710,85521428,85533584,85543772,85575131,85578930,85585702,85639374,85645818,85655417,85658537,85662388,85664563,85669722,85682158,85684741	85380798,85485753,85521575,85533880,85543955,85575329,85582107,85585823,85639449,85645954,85655787,85658590,85662453,85664755,85669830,85682212,85684874	Gene ID= ENSG00000170776.21 TPM= 27.98 Transcript Type= NA
chr15	85380565	85684874	85380565	85684874	+	transcript3259.chr15.nnic@AKAP13	transcript3259.chr15.nnic	protein_coding	85380565,85485710,85521428,85533584,85543772,85575131,85578930,85585702,85639374,85645818,85655417,85658537,85664563,85669722,85676976,85682158,85684741	85380798,85485753,85521575,85533880,85543955,85575329,85582107,85585823,85639449,85645954,85655787,85658590,85664755,85669830,85677098,85682212,85684874	Gene ID= ENSG00000170776.21 TPM= 7.27 Transcript Type= NA
chr15	85380565	85684874	85380565	85684874	+	transcript3261.chr15.nic@AKAP13	transcript3261.chr15.nic	protein_coding	85380565,85485710,85521428,85533584,85543772,85575131,85578930,85585702,85639374,85645818,85655417,85658537,85664563,85669722,85682158,85684741	85380798,85485753,85521575,85533880,85543955,85575329,85582107,85585823,85639449,85645954,85655787,85658590,85664755,85669830,85682212,85684874	Gene ID= ENSG00000170776.21 TPM= 45.5 Transcript Type= NA
chr15	85349271	85579184	85349271	85579184	+	transcript3267.chr15.nnic@AKAP13	transcript3267.chr15.nnic	protein_coding	85349271,85352027,85361267,85365335,85365899,85369052,85485710,85521428,85533584,85543772,85575131,85578930	85349385,85352123,85361420,85365406,85365954,85369130,85485753,85521575,85533880,85543955,85575329,85579184	Gene ID= ENSG00000170776.21 TPM= 3.19 Transcript Type= NA
chr15	85722972	85746171	85722972	85746171	+	transcript3271.chr15.nic@AKAP13	transcript3271.chr15.nic	protein_coding	85722972,85726410,85727066,85727381,85730513,85734992,85735560,85736090,85740222,85741046,85743492,85744628	85723320,85726486,85727247,85727463,85730707,85735150,85735630,85736134,85740272,85741495,85743825,85746171	Gene ID= ENSG00000170776.21 TPM= 19.12 Transcript Type= NA
chr15	85380587	85684874	85380587	85684874	+	ENST00000559362.5@AKAP13	ENST00000559362.5	protein_coding	85380587,85485710,85521428,85533584,85543772,85575131,85578930,85585702,85639374,85645818,85655417,85664563,85669722,85682158,85684741	85380798,85485753,85521575,85533880,85543955,85575329,85582107,85585823,85639449,85645954,85655787,85664755,85669830,85682212,85684874	Gene ID= ENSG00000170776.21 TPM= 8.86 Transcript Type= protein_coding
chr15	85380640	85536997	85380640	85536997	+	ENST00000560302.5@AKAP13	ENST00000560302.5	protein_coding	85380640,85485710,85521428,85533584	85380798,85485753,85521575,85536997	Gene ID= ENSG00000170776.21 TPM= 1.06 Transcript Type= protein_coding
chr15	85381523	85383039	85381523	85383039	-	transcript3299.chr15.nnic@NA	transcript3299.chr15.nnic	NA	85381523	85383039	Gene ID= novel_gene_chr15_3300 TPM= 59.48 Transcript Type= NA
chr15	85399223	85400419	85399223	85400419	+	transcript3291.chr15.nnic@NA	transcript3291.chr15.nnic	NA	85399223	85400419	Gene ID= novel_gene_chr15_3292 TPM= 2.12 Transcript Type= NA
chr15	85426957	85433085	85426957	85433085	-	transcript3303.chr15.nnic@NA	transcript3303.chr15.nnic	NA	85426957	85433085	Gene ID= novel_gene_chr15_3304 TPM= 6.37 Transcript Type= NA
chr15	85546738	85550072	85546738	85550072	-	transcript3301.chr15.nnic@NA	transcript3301.chr15.nnic	NA	85546738	85550072	Gene ID= novel_gene_chr15_3302 TPM= 6.37 Transcript Type= NA
chr15	85661438	85663322	85661438	85663322	+	transcript3293.chr15.nnic@NA	transcript3293.chr15.nnic	NA	85661438	85663322	Gene ID= novel_gene_chr15_3294 TPM= 2.12 Transcript Type= NA
chr15	85730999	85731417	85730999	85731417	-	transcript3305.chr15.nnic@NA	transcript3305.chr15.nnic	NA	85730999	85731417	Gene ID= novel_gene_chr15_3306 TPM= 3.19 Transcript Type= NA
chr15	85736914	85737317	85736914	85737317	-	transcript3307.chr15.nnic@NA	transcript3307.chr15.nnic	NA	85736914	85737317	Gene ID= novel_gene_chr15_3308 TPM= 5.31 Transcript Type= NA
chr15	85746142	85749155	85746142	85749155	+	transcript3289.chr15.nnic@NA	transcript3289.chr15.nnic	NA	85746142	85749155	Gene ID= novel_gene_chr15_3290 TPM= 24.43 Transcript Type= NA
chr15	85759323	85795030	85759323	85795030	-	ENST00000337975.5@KLHL25	ENST00000337975.5	protein_coding	85794766,85768017,85759323	85795030,85769820,85761011	Gene ID= ENSG00000183655.12 TPM= 12.75 Transcript Type= protein_coding
chr15	87977364	88256159	87977364	88256159	-	ENST00000317501.7@NTRK3	ENST00000317501.7	protein_coding	88255906,88184225,88183418,88147335,88137404,88136467,88135899,88135101,88128711,88127162,88126271,88032857,87981226,87977364	88256159,88184299,88183489,88147403,88137561,88136609,88136040,88135397,88128734,88127226,88126373,88033045,87981360,87979463	Gene ID= ENSG00000140538.16 TPM= 1.06 Transcript Type= protein_coding
chr15	88459476	88467419	88459476	88467419	-	ENST00000312475.4@MRPL46	ENST00000312475.4	protein_coding	88467150,88465587,88464703,88459476	88467419,88465773,88464876,88459863	Gene ID= ENSG00000259494.1 TPM= 152.95 Transcript Type= protein_coding
chr15	88467453	88480773	88467453	88480773	+	ENST00000325844.8@MRPS11	ENST00000325844.8	protein_coding	88467453,88467908,88472627,88475110,88476989,88477872	88467782,88468024,88472725,88475239,88477054,88480773	Gene ID= ENSG00000181991.15 TPM= 37.18 Transcript Type= protein_coding
chr15	88467718	88478259	88467718	88478259	+	ENST00000353598.6@MRPS11	ENST00000353598.6	protein_coding	88467718,88467908,88475110,88476989,88477872	88467782,88468024,88475239,88477054,88478259	Gene ID= ENSG00000181991.15 TPM= 4.25 Transcript Type= protein_coding
chr15	88512483	88546675	88512483	88546675	-	ENST00000268148.12@DET1	ENST00000268148.12	protein_coding	88546540,88530623,88527599,88516782,88512483	88546675,88531715,88527786,88516973,88513140	Gene ID= ENSG00000140543.14 TPM= 7.97 Transcript Type= protein_coding
chr15	88512483	88546653	88512483	88546653	-	ENST00000564406.5@DET1	ENST00000564406.5	protein_coding	88546540,88536312,88530623,88527599,88516782,88512483	88546653,88536381,88531715,88527786,88516973,88513140	Gene ID= ENSG00000140543.14 TPM= 6.9 Transcript Type= protein_coding
chr15	88506432	88509855	88506432	88509855	-	transcript3332.chr15.nnic@NA	transcript3332.chr15.nnic	NA	88506432	88509855	Gene ID= novel_gene_chr15_3333 TPM= 2.12 Transcript Type= NA
chr15	88621320	88632279	88621320	88632279	+	transcript3334.chr15.nnic@AEN	transcript3334.chr15.nnic	protein_coding	88621320,88626146,88629226,88630058,88631658	88621382,88626749,88629426,88631519,88632279	Gene ID= ENSG00000181026.14 TPM= 2.12 Transcript Type= NA
chr15	88621296	88632282	88621296	88632282	+	ENST00000332810.3@AEN	ENST00000332810.3	protein_coding	88621296,88626146,88629226,88630058	88621382,88626749,88629426,88632282	Gene ID= ENSG00000181026.14 TPM= 29.74 Transcript Type= protein_coding
chr15	88638743	88656483	88638743	88656483	+	ENST00000306072.9@ISG20	ENST00000306072.9	protein_coding	88638743,88639343,88652110,88655415	88639076,88639594,88652310,88656483	Gene ID= ENSG00000172183.14 TPM= 2.12 Transcript Type= protein_coding
chr15	88898683	88911752	88898683	88911752	-	transcript3349.chr15.nic@MFGE8	transcript3349.chr15.nic	protein_coding	88909792,88907195,88906626,88905757,88901551,88899656,88898683	88911752,88907376,88906778,88905901,88901735,88899811,88899532	Gene ID= ENSG00000140545.14 TPM= 548.61 Transcript Type= NA
chr15	88903473	88913405	88903473	88913405	-	transcript3356.chr15.nic@MFGE8	transcript3356.chr15.nic	protein_coding	88913247,88909792,88907195,88906626,88903473	88913405,88909923,88907376,88906778,88905901	Gene ID= ENSG00000140545.14 TPM= 24.16 Transcript Type= NA
chr15	88903473	88911752	88903473	88911752	-	transcript3360.chr15.nic@MFGE8	transcript3360.chr15.nic	protein_coding	88909792,88907195,88906626,88903473	88911752,88907376,88906778,88905901	Gene ID= ENSG00000140545.14 TPM= 29.74 Transcript Type= NA
chr15	88898683	88899275	88898683	88899275	-	transcript3365.chr15.nnic@MFGE8	transcript3365.chr15.nnic	protein_coding	88899027,88898683	88899275,88898720	Gene ID= ENSG00000140545.14 TPM= 2.12 Transcript Type= NA
chr15	88898714	88913411	88898714	88913411	-	ENST00000268150.12@MFGE8	ENST00000268150.12	protein_coding	88913247,88909792,88907195,88906626,88905757,88901551,88899656,88898714	88913411,88909923,88907376,88906778,88905901,88901735,88899811,88899532	Gene ID= ENSG00000140545.14 TPM= 113.92 Transcript Type= protein_coding
chr15	88898713	88913381	88898713	88913381	-	ENST00000268151.11@MFGE8	ENST00000268151.11	protein_coding	88913247,88909792,88907195,88906626,88905757,88901551,88898713	88913381,88909923,88907376,88906778,88905901,88901735,88899532	Gene ID= ENSG00000140545.14 TPM= 23.1 Transcript Type= protein_coding
chr15	89088150	89202360	89088150	89202360	+	ENST00000352732.9@ABHD2	ENST00000352732.9	protein_coding	89088150,89113725,89116322,89151677,89155367,89175812,89185424,89188193,89191080,89193235,89195227	89088563,89113824,89116521,89151852,89155534,89175995,89185516,89188303,89191149,89193319,89202360	Gene ID= ENSG00000140526.17 TPM= 101.44 Transcript Type= protein_coding
chr15	89104496	89196971	89104496	89196971	+	transcript3380.chr15.nnic@ABHD2	transcript3380.chr15.nnic	protein_coding	89104496,89113725,89116322,89151677,89155367,89175812,89185424,89188193,89191080,89193235,89195227	89104581,89113824,89116521,89151852,89155534,89175995,89185516,89188303,89191149,89193319,89196971	Gene ID= ENSG00000140526.17 TPM= 14.34 Transcript Type= NA
chr15	89121460	89123901	89121460	89123901	-	transcript3387.chr15.nnic@NA	transcript3387.chr15.nnic	NA	89121460	89123901	Gene ID= novel_gene_chr15_3388 TPM= 3.19 Transcript Type= NA
chr15	89316305	89334847	89316305	89334847	-	ENST00000268124.9@POLG	ENST00000268124.9	protein_coding	89334673,89333096,89330081,89328943,89328685,89328456,89327167,89326912,89326612,89325450,89324107,89323815,89323404,89322742,89321962,89321736,89321125,89320766,89319228,89318931,89318541,89317376,89316305	89334847,89333913,89330276,89329110,89328831,89328535,89327349,89327063,89326738,89325686,89324227,89323901,89323511,89322902,89322015,89321853,89321260,89321012,89319350,89319099,89318749,89317536,89316827	Gene ID= ENSG00000140521.12 TPM= 23.37 Transcript Type= protein_coding
chr15	89316320	89334861	89316320	89334861	-	ENST00000442287.6@POLG	ENST00000442287.6	protein_coding	89334685,89333096,89330081,89328943,89328685,89328456,89327167,89326912,89326612,89325450,89324107,89323815,89323404,89322742,89321962,89321736,89321125,89320766,89319228,89318931,89318541,89317376,89316320	89334861,89333913,89330276,89329110,89328831,89328535,89327349,89327063,89326738,89325686,89324227,89323901,89323511,89322902,89322015,89321853,89321260,89321012,89319350,89319099,89318749,89317536,89316827	Gene ID= ENSG00000140521.12 TPM= 26.55 Transcript Type= protein_coding
chr15	89471407	89496613	89471407	89496613	-	ENST00000268122.8@RHCG	ENST00000268122.8	protein_coding	89496361,89486799,89483067,89480261,89479322,89477837,89477517,89477082,89476755,89472711,89471407	89496613,89486985,89483217,89480408,89479488,89477974,89477653,89477206,89476828,89472863,89471855	Gene ID= ENSG00000140519.12 TPM= 7.44 Transcript Type= protein_coding
chr15	89627977	89655451	89627977	89655451	-	ENST00000394412.7@KIF7	ENST00000394412.7	protein_coding	89655399,89652603,89649741,89648974,89648255,89647596,89646830,89645893,89645336,89645013,89642203,89633686,89633141,89632820,89631495,89630287,89629375,89628976,89627977	89655451,89652954,89649941,89649367,89648774,89647712,89647057,89646026,89645451,89645165,89642405,89633883,89633266,89632996,89631710,89630493,89629573,89629122,89628786	Gene ID= ENSG00000166813.14 TPM= 4.25 Transcript Type= protein_coding
chr15	89664365	89679402	89664365	89679402	-	ENST00000300055.9@PLIN1	ENST00000300055.9	protein_coding	89679251,89677445,89673210,89671482,89669980,89669500,89667602,89666936,89664365	89679402,89677503,89673414,89671564,89670244,89669672,89667793,89667181,89665942	Gene ID= ENSG00000166819.11 TPM= 3.19 Transcript Type= protein_coding
chr15	89681531	89690782	89681531	89690782	-	ENST00000300056.7@PEX11A	ENST00000300056.7	protein_coding	89690577,89686431,89681531	89690782,89686546,89683948	Gene ID= ENSG00000166821.8 TPM= 3.19 Transcript Type= protein_coding
chr15	89748661	89751310	89748661	89751310	-	ENST00000300057.4@MESP1	ENST00000300057.4	protein_coding	89750509,89748661	89751310,89750227	Gene ID= ENSG00000166823.5 TPM= 4.25 Transcript Type= protein_coding
chr15	89784889	89814862	89784889	89814862	-	ENST00000300060.6@ANPEP	ENST00000300060.6	protein_coding	89814772,89805970,89805321,89805078,89804491,89804253,89803889,89803647,89803442,89803239,89801435,89801111,89799426,89799260,89797575,89793035,89792452,89792160,89790953,89790460,89784889	89814862,89806806,89805463,89805217,89804617,89804407,89804002,89803790,89803507,89803304,89801607,89801187,89799559,89799315,89797722,89793126,89792562,89792327,89791093,89790541,89785501	Gene ID= ENSG00000166825.13 TPM= 1.06 Transcript Type= protein_coding
chr15	89830599	89894342	89830599	89894342	-	ENST00000336418.8@AP3S2	ENST00000336418.8	protein_coding	89893881,89889049,89888521,89871475,89837615,89830599	89894342,89889140,89888632,89871546,89837722,89835643	Gene ID= ENSG00000157823.16 TPM= 20.18 Transcript Type= protein_coding
chr15	89902849	89912983	89902849	89912983	-	transcript3428.chr15.nic@C15orf38-AP3S2	transcript3428.chr15.nic	protein_coding	89912744,89910744,89908280,89903777,89902849	89912983,89910819,89908412,89903983,89903379	Gene ID= ENSG00000250021.7 TPM= 3.19 Transcript Type= NA
chr15	89834308	89912882	89834308	89912882	-	ENST00000398333.7@C15orf38-AP3S2	ENST00000398333.7	protein_coding	89912744,89910744,89908280,89903777,89903216,89889049,89888521,89871475,89837615,89834308	89912882,89910819,89908412,89903983,89903379,89889140,89888632,89871546,89837722,89835643	Gene ID= ENSG00000250021.7 TPM= 7.44 Transcript Type= protein_coding
chr15	89895006	89912956	89895006	89912956	-	ENST00000357484.9@ARPIN	ENST00000357484.9	protein_coding	89912744,89910744,89908280,89903777,89903216,89895006	89912956,89910819,89908412,89903983,89903379,89901803	Gene ID= ENSG00000242498.7 TPM= 5.31 Transcript Type= protein_coding
chr15	90024955	90026003	90024955	90026003	+	ENST00000614119.1@AC087284.1	ENST00000614119.1	sense_intronic	90024955	90026003	Gene ID= ENSG00000273691.1 TPM= 1.06 Transcript Type= sense_intronic
chr15	90001392	90082200	90001392	90082200	+	ENST00000268154.8@ZNF710	ENST00000268154.8	protein_coding	90001392,90067110,90073071,90074116,90079660	90001614,90068595,90073262,90074290,90082200	Gene ID= ENSG00000140548.9 TPM= 6.37 Transcript Type= protein_coding
chr15	90074512	90076644	90074512	90076644	-	ENST00000620791.1@ZNF710-AS1	ENST00000620791.1	antisense_RNA	90074512	90076644	Gene ID= ENSG00000259291.2 TPM= 16.99 Transcript Type= antisense_RNA
chr15	90083996	90102468	90083996	90102468	-	ENST00000560061.1@IDH2	ENST00000560061.1	protein_coding	90102276,90088587,90088359,90087439,90087112,90085275,90085001,90084816,90083996	90102468,90088747,90088502,90087575,90087263,90085387,90085098,90084908,90084353	Gene ID= ENSG00000182054.9 TPM= 7.44 Transcript Type= nonsense_mediated_decay
chr15	90083045	90102504	90083045	90102504	-	ENST00000330062.7@IDH2	ENST00000330062.7	protein_coding	90102276,90091553,90090479,90088587,90088359,90087439,90087112,90085275,90085001,90084816,90083045	90102504,90091644,90090644,90088747,90088502,90087575,90087263,90085387,90085098,90084908,90084353	Gene ID= ENSG00000182054.9 TPM= 116.84 Transcript Type= protein_coding
chr15	90184963	90229670	90184963	90229670	+	ENST00000332496.10@SEMA4B	ENST00000332496.10	protein_coding	90184963,90201458,90217439,90217767,90219793,90220982,90221367,90221614,90223559,90223838,90224968,90225282,90225661,90227557,90227904	90185081,90201735,90217602,90217829,90219891,90221093,90221480,90221765,90223740,90223988,90225178,90225397,90225827,90227642,90229670	Gene ID= ENSG00000185033.14 TPM= 29.74 Transcript Type= protein_coding
chr15	90230246	90233941	90230246	90233941	-	transcript3480.chr15.nic@CIB1	transcript3480.chr15.nic	protein_coding	90233835,90232219,90231357,90231095,90230934,90230246	90233941,90233703,90231507,90231213,90231022,90230505	Gene ID= ENSG00000185043.10 TPM= 6.19 Transcript Type= NA
chr15	90240888	90242080	90240888	90242080	+	ENST00000329600.7@GDPGP1	ENST00000329600.7	protein_coding	90240888	90242080	Gene ID= ENSG00000183208.12 TPM= 1.06 Transcript Type= protein_coding
chr15	90265677	90272208	90265677	90272208	+	transcript3492.chr15.nnic@AC091167.3	transcript3492.chr15.nnic	protein_coding	90265677,90266122,90271188	90265876,90266398,90272208	Gene ID= ENSG00000261147.1 TPM= 15.93 Transcript Type= NA
chr15	90265649	90272211	90265649	90272211	+	transcript3491.chr15.nnic@NGRN	transcript3491.chr15.nnic	protein_coding	90265649,90266288,90271598	90265876,90266398,90272211	Gene ID= ENSG00000182768.8 TPM= 16.99 Transcript Type= NA
chr15	90352245	90362847	90352245	90362847	+	ENST00000354377.7@ZNF774	ENST00000354377.7	protein_coding	90352245,90354642,90358851,90360043	90352411,90354764,90358957,90362847	Gene ID= ENSG00000196391.10 TPM= 2.12 Transcript Type= protein_coding
chr15	90388218	90502243	90388218	90502243	+	ENST00000268182.9@IQGAP1	ENST00000268182.9	protein_coding	90388218,90390774,90426110,90429589,90433719,90439332,90440502,90441506,90443394,90448573,90449559,90452775,90453132,90454428,90456152,90466001,90466269,90467450,90472840,90473715,90473896,90474064,90474485,90476663,90477067,90477665,90481960,90482197,90483361,90484220,90486030,90486954,90487495,90491333,90492545,90494713,90497232,90499995	90388396,90390873,90426266,90429666,90433795,90439399,90440615,90441684,90443478,90448736,90449643,90452938,90453292,90454552,90456315,90466091,90466436,90467592,90473010,90473798,90473967,90474133,90474693,90476818,90477230,90477889,90482100,90482281,90483593,90484352,90486132,90487089,90487582,90491545,90492711,90494835,90497340,90502243	Gene ID= ENSG00000140575.12 TPM= 10.62 Transcript Type= protein_coding
chr15	90450333	90473573	90450333	90473573	+	transcript3505.chr15.nnic@IQGAP1	transcript3505.chr15.nnic	protein_coding	90450333,90453130,90454428,90456152,90466001,90466269,90467450,90472840	90452938,90453292,90454552,90456315,90466091,90466436,90467592,90473573	Gene ID= ENSG00000140575.12 TPM= 12.75 Transcript Type= NA
chr15	90445141	90448831	90445141	90448831	-	transcript3506.chr15.nnic@NA	transcript3506.chr15.nnic	NA	90445141	90448831	Gene ID= novel_gene_chr15_3507 TPM= 2.12 Transcript Type= NA
chr15	90529925	90645345	90529925	90645345	+	ENST00000420329.6@CRTC3	ENST00000420329.6	protein_coding	90529925,90540039,90593636,90602324,90604385,90607378,90614453,90617883,90619741,90625776,90629234,90638446,90638735,90641097,90641935	90530203,90540137,90593755,90602385,90604447,90607478,90614488,90617968,90619790,90625993,90629532,90638646,90638815,90641199,90645345	Gene ID= ENSG00000140577.15 TPM= 20.18 Transcript Type= protein_coding
chr15	90871539	90883458	90871539	90883458	+	ENST00000610579.4@FURIN	ENST00000610579.4	protein_coding	90871539,90875582,90876255,90876462,90876896,90877135,90877527,90878132,90878764,90879444,90879671,90879867,90880094,90880691,90880930,90881286	90871605,90875917,90876353,90876557,90877024,90877211,90877615,90878304,90878976,90879544,90879774,90879984,90880273,90880815,90881040,90883458	Gene ID= ENSG00000140564.11 TPM= 64.79 Transcript Type= protein_coding
chr15	90875030	90880816	90875030	90880816	+	transcript3518.chr15.nnic@FURIN	transcript3518.chr15.nnic	protein_coding	90875030,90876253,90876460,90876894,90877135,90878762,90879449,90879671,90879865,90880092	90875917,90876353,90876557,90877024,90878304,90878987,90879544,90879774,90879984,90880816	Gene ID= ENSG00000140564.11 TPM= 4.25 Transcript Type= NA
chr15	90884412	90895776	90884412	90895776	+	ENST00000328850.7@FES	ENST00000328850.7	protein_coding	90884412,90885037,90885412,90886961,90887187,90889306,90889517,90889840,90890092,90890401,90890982,90891554,90892058,90892707,90893100,90893291,90893654,90893936,90895416	90884544,90885258,90885585,90887057,90887370,90889443,90889636,90889962,90890278,90890484,90891191,90891676,90892111,90892825,90893194,90893414,90893811,90894058,90895776	Gene ID= ENSG00000182511.11 TPM= 10.8 Transcript Type= protein_coding
chr15	90884437	90895776	90884437	90895776	+	transcript3523.chr15.nic@FES	transcript3523.chr15.nic	protein_coding	90884437,90885037,90885412,90886961,90887187,90889306,90889517,90889840,90890092,90890401,90891554,90892058,90892707,90893100,90893291,90893654,90893936,90895416	90884544,90885258,90885585,90887057,90887370,90889443,90889636,90889962,90890278,90890484,90891676,90892111,90892825,90893194,90893414,90893811,90894058,90895776	Gene ID= ENSG00000182511.11 TPM= 3.37 Transcript Type= NA
chr15	90884504	90895776	90884504	90895776	+	transcript3525.chr15.nic@FES	transcript3525.chr15.nic	protein_coding	90884504,90885037,90885412,90886961,90887187,90889306,90889517,90889840,90890092,90890401,90891554,90892058,90892707,90893100,90893291,90893654,90893936,90895416	90884639,90885258,90885585,90887057,90887370,90889443,90889636,90889962,90890278,90890484,90891676,90892111,90892825,90893194,90893414,90893811,90894058,90895776	Gene ID= ENSG00000182511.11 TPM= 2.84 Transcript Type= NA
chr15	90930919	90932568	90930919	90932568	-	transcript3540.chr15.nic@HDDC3	transcript3540.chr15.nic	protein_coding	90932055,90930919	90932568,90931944	Gene ID= ENSG00000184508.10 TPM= 2.12 Transcript Type= NA
chr15	90930180	90954093	90930180	90954093	+	ENST00000394275.6@UNC45A	ENST00000394275.6	protein_coding	90930180,90933977,90934339,90934944,90935544,90935946,90936285,90939731,90940306,90942437,90942912,90944892,90946614,90947796,90948142,90948654,90949316,90949654,90950154,90950500,90952929,90953155,90953459	90930255,90934143,90934549,90935330,90935705,90935982,90936460,90939823,90940473,90942605,90943082,90945063,90946914,90947890,90948283,90948794,90949443,90949720,90950267,90950615,90953046,90953310,90954093	Gene ID= ENSG00000140553.17 TPM= 22.31 Transcript Type= protein_coding
chr15	90935285	90954093	90935285	90954093	+	ENST00000418476.2@UNC45A	ENST00000418476.2	protein_coding	90935285,90935544,90935946,90936285,90939731,90940306,90942437,90942912,90944892,90946614,90947796,90948142,90948654,90949316,90949654,90950154,90950500,90952929,90953155,90953459	90935375,90935705,90935982,90936460,90939823,90940473,90942605,90943082,90945063,90946914,90947890,90948283,90948794,90949443,90949720,90950267,90950615,90953046,90953310,90954093	Gene ID= ENSG00000140553.17 TPM= 21.24 Transcript Type= protein_coding
chr15	90954884	90962342	90954884	90962342	+	transcript3546.chr15.nic@RCCD1	transcript3546.chr15.nic	protein_coding	90954884,90955800,90956612,90957113,90957604,90959900,90960328,90961025,90961618	90954948,90955883,90956900,90957503,90957725,90959998,90960498,90961054,90962342	Gene ID= ENSG00000166965.12 TPM= 5.31 Transcript Type= NA
chr15	90954870	90963125	90954870	90963125	+	ENST00000394258.6@RCCD1	ENST00000394258.6	protein_coding	90954870,90956612,90957113,90957604,90959900,90960328,90961025,90961618	90954948,90956900,90957503,90957725,90959998,90960498,90961054,90963125	Gene ID= ENSG00000166965.12 TPM= 7.44 Transcript Type= protein_coding
chr15	90954868	90962342	90954868	90962342	+	transcript3551.chr15.nic@RCCD1	transcript3551.chr15.nic	protein_coding	90954868,90956612,90957113,90957604,90959900,90960328	90954948,90956900,90957503,90957725,90959998,90962342	Gene ID= ENSG00000166965.12 TPM= 3.19 Transcript Type= NA
chr15	90954881	90962324	90954881	90962324	+	ENST00000555155.5@RCCD1	ENST00000555155.5	protein_coding	90954881,90956612,90957113,90957604,90959900,90960334,90961025,90961618	90954948,90956900,90957503,90957725,90959998,90960498,90961054,90962324	Gene ID= ENSG00000166965.12 TPM= 20.18 Transcript Type= protein_coding
chr15	90966077	90995629	90966077	90995629	-	ENST00000361188.9@PRC1	ENST00000361188.9	protein_coding	90994407,90984693,90984018,90981748,90981499,90980884,90980242,90979158,90976676,90974585,90974136,90970404,90969447,90966077	90995629,90984825,90984140,90981981,90981669,90981033,90980389,90979294,90976771,90974731,90974246,90970514,90969623,90967202	Gene ID= ENSG00000198901.13 TPM= 1.06 Transcript Type= protein_coding
chr15	91853714	92163568	91853714	92163568	+	transcript3563.chr15.nnic@SLCO3A1	transcript3563.chr15.nnic	protein_coding	91853714,91915993,92094881,92104279,92120465,92126061,92128351,92146984,92150950,92162756,92163296	91854088,91916458,92094979,92104542,92120629,92126259,92128489,92147159,92151014,92162998,92163568	Gene ID= ENSG00000176463.13 TPM= 12.75 Transcript Type= NA
chr15	91853695	92165903	91853695	92165903	+	ENST00000318445.10@SLCO3A1	ENST00000318445.10	protein_coding	91853695,91915993,92094881,92104279,92120465,92126061,92128351,92146984,92150950,92162756	91854088,91916458,92094979,92104542,92120629,92126259,92128489,92147159,92151014,92165903	Gene ID= ENSG00000176463.13 TPM= 19.12 Transcript Type= protein_coding
chr15	91853856	92172435	91853856	92172435	+	ENST00000424469.2@SLCO3A1	ENST00000424469.2	protein_coding	91853856,91915993,92094881,92104279,92120465,92126061,92128351,92146984,92150950,92162756,92171780	91854088,91916458,92094979,92104542,92120629,92126259,92128489,92147159,92151014,92162998,92172435	Gene ID= ENSG00000176463.13 TPM= 13.81 Transcript Type= protein_coding
chr15	91964745	91967626	91964745	91967626	-	transcript3579.chr15.nnic@NA	transcript3579.chr15.nnic	NA	91964745	91967626	Gene ID= novel_gene_chr15_3580 TPM= 2.12 Transcript Type= NA
chr15	92011086	92015904	92011086	92015904	+	transcript3575.chr15.nnic@NA	transcript3575.chr15.nnic	NA	92011086	92015904	Gene ID= novel_gene_chr15_3576 TPM= 2.12 Transcript Type= NA
chr15	92080392	92085777	92080392	92085777	-	transcript3581.chr15.nnic@NA	transcript3581.chr15.nnic	NA	92080392	92085777	Gene ID= novel_gene_chr15_3582 TPM= 3.19 Transcript Type= NA
chr15	92393821	92445461	92393821	92445461	+	transcript3585.chr15.nic@ST8SIA2	transcript3585.chr15.nic	protein_coding	92393821,92430049,92434247,92438353,92444636	92394162,92430111,92434375,92438610,92445461	Gene ID= ENSG00000140557.11 TPM= 3.19 Transcript Type= NA
chr15	92617443	92734206	92617443	92734206	-	transcript3588.chr15.nnic@FAM174B	transcript3588.chr15.nnic	protein_coding	92733985,92699040,92630214,92617443	92734206,92699163,92630345,92619459	Gene ID= ENSG00000185442.12 TPM= 3.54 Transcript Type= NA
chr15	92617443	92655958	92617443	92655958	-	ENST00000327355.5@FAM174B	ENST00000327355.5	protein_coding	92655316,92630214,92617443	92655958,92630345,92619459	Gene ID= ENSG00000185442.12 TPM= 13.1 Transcript Type= protein_coding
chr15	92617443	92678213	92617443	92678213	-	transcript3591.chr15.nnic@FAM174B	transcript3591.chr15.nnic	protein_coding	92678130,92630214,92617443	92678213,92630345,92619459	Gene ID= ENSG00000185442.12 TPM= 3.54 Transcript Type= NA
chr15	92882678	92898072	92882678	92898072	+	transcript3601.chr15.nic@LINC01578	transcript3601.chr15.nic	processed_transcript	92882678,92883585,92885515,92886169,92892004,92897724	92883186,92883778,92885584,92886254,92892072,92898072	Gene ID= ENSG00000272888.5 TPM= 2.12 Transcript Type= NA
chr15	92883267	92898072	92883267	92898072	+	transcript3606.chr15.nic@AC013394.1	transcript3606.chr15.nic	protein_coding	92883267,92885515,92886169,92892004,92897724	92883543,92885584,92886254,92892072,92898072	Gene ID= ENSG00000279765.3 TPM= 2.12 Transcript Type= NA
chr15	92899902	92902292	92899902	92902292	+	transcript3608.chr15.nnic@NA	transcript3608.chr15.nnic	NA	92899902	92902292	Gene ID= novel_gene_chr15_3609 TPM= 2.12 Transcript Type= NA
chr15	92904473	92949231	92904473	92949231	+	ENST00000626782.2@CHD2	ENST00000626782.2	protein_coding	92904473,92924321,92927244,92929030,92937518,92939578,92941822,92942843,92944415,92945821,92946038,92948952	92905008,92924552,92927330,92929091,92937625,92939718,92941955,92943068,92944515,92945865,92946216,92949231	Gene ID= ENSG00000173575.20 TPM= 1.06 Transcript Type= protein_coding
chr15	92900335	92949234	92900335	92949234	+	ENST00000420239.6@CHD2	ENST00000420239.6	protein_coding	92900335,92901167,92924321,92927244,92929030,92937518,92939578,92941822,92942843,92944415,92945821,92946038,92948952	92900824,92901299,92924552,92927330,92929091,92937625,92939718,92941955,92943068,92944515,92945865,92946216,92949234	Gene ID= ENSG00000173575.20 TPM= 9.56 Transcript Type= protein_coding
chr15	93043416	93073148	93043416	93073148	-	ENST00000542321.6@RGMA	ENST00000542321.6	protein_coding	93072916,93051993,93043416	93073148,93052507,93045705	Gene ID= ENSG00000182175.13 TPM= 22.31 Transcript Type= protein_coding
chr15	96303523	96305877	96303523	96305877	+	transcript3621.chr15.nnic@NA	transcript3621.chr15.nnic	NA	96303523	96305877	Gene ID= novel_gene_chr15_3622 TPM= 3.19 Transcript Type= NA
chr15	96328766	96330247	96328766	96330247	-	transcript3623.chr15.nnic@NA	transcript3623.chr15.nnic	NA	96328766	96330247	Gene ID= novel_gene_chr15_3624 TPM= 5.31 Transcript Type= NA
chr15	96330717	96340263	96330717	96340263	+	ENST00000394166.7@NR2F2	ENST00000394166.7	protein_coding	96330717,96334076,96337348	96332547,96334603,96340263	Gene ID= ENSG00000185551.14 TPM= 21.24 Transcript Type= protein_coding
chr15	96333163	96337836	96333163	96337836	+	ENST00000453270.2@NR2F2	ENST00000453270.2	protein_coding	96333163,96334076,96337348	96333857,96334603,96337836	Gene ID= ENSG00000185551.14 TPM= 2.12 Transcript Type= protein_coding
chr15	96334654	96337788	96334654	96337788	+	transcript3630.chr15.nnic@NA	transcript3630.chr15.nnic	NA	96334654	96337788	Gene ID= novel_gene_chr15_3631 TPM= 2.12 Transcript Type= NA
chr15	97960698	97973838	97960698	97973838	+	ENST00000268042.6@ARRDC4	ENST00000268042.6	protein_coding	97960698,97965600,97965895,97968014,97969123,97969883,97970589,97971131	97961168,97965666,97966042,97968116,97969379,97970045,97970743,97973838	Gene ID= ENSG00000140450.8 TPM= 171.01 Transcript Type= protein_coding
chr15	98647989	98648148	98647989	98648148	-	transcript3671.chr15.nnic@NA	transcript3671.chr15.nnic	NA	98647989	98648148	Gene ID= novel_gene_chr15_3672 TPM= 3.19 Transcript Type= NA
chr15	98649526	98713220	98649526	98713220	+	transcript3658.chr15.nic@IGF1R	transcript3658.chr15.nic	protein_coding	98649526,98707562	98649675,98713220	Gene ID= ENSG00000140443.13 TPM= 132.77 Transcript Type= NA
chr15	98711899	98714703	98711899	98714703	+	transcript3661.chr15.nnic@NA	transcript3661.chr15.nnic	NA	98711899	98714703	Gene ID= novel_gene_chr15_3662 TPM= 5.31 Transcript Type= NA
chr15	98916263	98919207	98916263	98919207	-	transcript3673.chr15.nnic@NA	transcript3673.chr15.nnic	NA	98916263	98919207	Gene ID= novel_gene_chr15_3674 TPM= 4.25 Transcript Type= NA
chr15	98957135	98958870	98957135	98958870	+	transcript3667.chr15.nnic@NA	transcript3667.chr15.nnic	NA	98957135	98958870	Gene ID= novel_gene_chr15_3668 TPM= 4.25 Transcript Type= NA
chr15	98968230	99007795	98968230	99007795	-	ENST00000535714.1@PGPEP1L	ENST00000535714.1	protein_coding	99007359,99005429,98971036,98969425,98968230	99007795,99005656,98971158,98969651,98968697	Gene ID= ENSG00000183571.10 TPM= 4.25 Transcript Type= protein_coding
chr15	99105035	99135589	99105035	99135589	+	ENST00000336292.10@SYNM	ENST00000336292.10	protein_coding	99105035,99113591,99126722,99129367	99106009,99113715,99126792,99135589	Gene ID= ENSG00000182253.14 TPM= 110.46 Transcript Type= protein_coding
chr15	99105080	99135583	99105080	99135583	+	ENST00000594047.2@SYNM	ENST00000594047.2	protein_coding	99105080,99113591,99126722,99129367,99132750	99106009,99113715,99126792,99131813,99135583	Gene ID= ENSG00000182253.14 TPM= 212.43 Transcript Type= protein_coding
chr15	99123305	99126180	99123305	99126180	-	transcript3691.chr15.nnic@NA	transcript3691.chr15.nnic	NA	99123305	99126180	Gene ID= novel_gene_chr15_3692 TPM= 4.25 Transcript Type= NA
chr15	99251362	99390729	99251362	99390729	+	ENST00000301981.7@LRRC28	ENST00000301981.7	protein_coding	99251362,99255898,99276576,99287257,99287814,99333923,99352369,99361336,99363106,99386030	99251541,99256125,99276616,99287294,99287951,99334129,99352471,99361511,99363265,99390729	Gene ID= ENSG00000168904.14 TPM= 9.56 Transcript Type= protein_coding
chr15	99251470	99386296	99251470	99386296	+	transcript3706.chr15.nic@LRRC28	transcript3706.chr15.nic	protein_coding	99251470,99255898,99333923,99352369,99361336,99363106,99386030	99251541,99256125,99334129,99352471,99361511,99363265,99386296	Gene ID= ENSG00000168904.14 TPM= 3.19 Transcript Type= NA
chr15	99565969	99716406	99565969	99716406	+	transcript3729.chr15.nic@MEF2A	transcript3729.chr15.nic	protein_coding	99565969,99598430,99632978,99645561,99671520,99674393,99675399,99690241,99703362,99706729,99710634,99712390	99566104,99598511,99633173,99645764,99671657,99674612,99675458,99690428,99703385,99706855,99710760,99716406	Gene ID= ENSG00000068305.17 TPM= 9.1 Transcript Type= NA
chr15	99565700	99716466	99565700	99716466	+	ENST00000354410.9@MEF2A	ENST00000354410.9	protein_coding	99565700,99598430,99632978,99645561,99671520,99674393,99675399,99690241,99706729,99710634,99712390	99566104,99598511,99633173,99645764,99671657,99674612,99675458,99690428,99706855,99710760,99716466	Gene ID= ENSG00000068305.17 TPM= 2.46 Transcript Type= protein_coding
chr15	99565969	99716406	99565969	99716406	+	transcript3751.chr15.nic@MEF2A	transcript3751.chr15.nic	protein_coding	99565969,99632978,99645561,99671323,99674393,99675399,99690241,99703362,99706729,99710634,99712390	99566104,99633173,99645764,99671454,99674612,99675458,99690428,99703385,99706855,99710760,99716406	Gene ID= ENSG00000068305.17 TPM= 7.3 Transcript Type= NA
chr15	99565969	99716406	99565969	99716406	+	transcript3755.chr15.nic@MEF2A	transcript3755.chr15.nic	protein_coding	99565969,99632978,99645561,99671520,99674393,99675399,99690241,99703362,99706729,99710634,99712390	99566104,99633173,99645764,99671657,99674612,99675458,99690428,99703385,99706855,99710760,99716406	Gene ID= ENSG00000068305.17 TPM= 6.59 Transcript Type= NA
chr15	99565928	99716422	99565928	99716422	+	ENST00000338042.10@MEF2A	ENST00000338042.10	protein_coding	99565928,99632978,99645561,99671323,99674393,99675399,99690241,99706729,99710634,99712390	99566104,99633173,99645764,99671454,99674612,99675458,99690428,99706855,99710760,99716422	Gene ID= ENSG00000068305.17 TPM= 2.25 Transcript Type= protein_coding
chr15	99565969	99690561	99565969	99690561	+	transcript3779.chr15.nic@MEF2A	transcript3779.chr15.nic	protein_coding	99565969,99598430,99632978,99645561,99671323,99674393,99675399,99690241	99566104,99598511,99633173,99645764,99671454,99674612,99675458,99690561	Gene ID= ENSG00000068305.17 TPM= 4.6 Transcript Type= NA
chr15	99708886	99714187	99708886	99714187	+	transcript3811.chr15.nnic@MEF2A	transcript3811.chr15.nnic	protein_coding	99708886,99710634,99712390	99708935,99710760,99714187	Gene ID= ENSG00000068305.17 TPM= 8.68 Transcript Type= NA
chr15	99565980	99713782	99565980	99713782	+	ENST00000557785.5@MEF2A	ENST00000557785.5	protein_coding	99565980,99598430,99632978,99645561,99671323,99674393,99675399,99690241,99706729,99710634,99712390	99566104,99598511,99633173,99645764,99671454,99674612,99675458,99690428,99706855,99710760,99713782	Gene ID= ENSG00000068305.17 TPM= 4.6 Transcript Type= protein_coding
chr15	99566087	99716424	99566087	99716424	+	ENST00000557942.5@MEF2A	ENST00000557942.5	protein_coding	99566087,99598430,99632978,99645561,99671323,99674393,99675399,99690241,99703362,99706729,99710634,99712390	99566104,99598511,99633173,99645764,99671454,99674612,99675458,99690428,99703385,99706855,99710760,99716424	Gene ID= ENSG00000068305.17 TPM= 6.59 Transcript Type= protein_coding
chr15	99637119	99640535	99637119	99640535	-	transcript3820.chr15.nnic@NA	transcript3820.chr15.nnic	NA	99637119	99640535	Gene ID= novel_gene_chr15_3821 TPM= 13.81 Transcript Type= NA
chr15	99729325	99733414	99729325	99733414	-	transcript3796.chr15.nic@LYSMD4	transcript3796.chr15.nic	protein_coding	99733285,99731718,99731358,99731173,99729325	99733414,99732007,99731422,99731198,99729731	Gene ID= ENSG00000183060.15 TPM= 2.12 Transcript Type= NA
chr15	99715697	99733444	99715697	99733444	-	transcript3801.chr15.nnic@LYSMD4	transcript3801.chr15.nnic	protein_coding	99733345,99720784,99720325,99715697	99733444,99720966,99720452,99717822	Gene ID= ENSG00000183060.15 TPM= 3.19 Transcript Type= NA
chr15	99727405	99733456	99727405	99733456	-	transcript3805.chr15.nnic@LYSMD4	transcript3805.chr15.nnic	protein_coding	99733345,99731718,99731358,99727405	99733456,99732007,99731422,99729731	Gene ID= ENSG00000183060.15 TPM= 2.39 Transcript Type= NA
chr15	99720108	99733444	99720108	99733444	-	transcript3814.chr15.nnic@LYSMD4	transcript3814.chr15.nnic	protein_coding	99733345,99720784,99720108	99733444,99720966,99720452	Gene ID= ENSG00000183060.15 TPM= 10.62 Transcript Type= NA
chr15	99727405	99733456	99727405	99733456	-	transcript3816.chr15.nnic@LYSMD4	transcript3816.chr15.nnic	protein_coding	99733345,99731718,99727405	99733456,99732007,99729724	Gene ID= ENSG00000183060.15 TPM= 4.51 Transcript Type= NA
chr15	99727401	99733444	99727401	99733444	-	ENST00000545021.2@LYSMD4	ENST00000545021.2	protein_coding	99733345,99727401	99733444,99729731	Gene ID= ENSG00000183060.15 TPM= 2.39 Transcript Type= protein_coding
chr15	99727405	99733339	99727405	99733339	-	ENST00000409796.5@LYSMD4	ENST00000409796.5	protein_coding	99733285,99731718,99727405	99733339,99732007,99729731	Gene ID= ENSG00000183060.15 TPM= 2.39 Transcript Type= protein_coding
chr15	99790156	99806927	99790156	99806927	-	ENST00000341853.5@DNM1P46	ENST00000341853.5	transcribed_unprocessed_pseudogene	99806796,99804800,99800975,99799632,99790156	99806927,99804929,99801179,99800254,99792896	Gene ID= ENSG00000182397.14 TPM= 2.12 Transcript Type= processed_transcript
chr15	100566914	100602240	100566914	100602240	-	ENST00000314742.12@LINS1	ENST00000314742.12	protein_coding	100602121,100580444,100580263,100574987,100573651,100571894,100566914	100602240,100580945,100580352,100575128,100574241,100572065,100570117	Gene ID= ENSG00000140471.16 TPM= 1.06 Transcript Type= protein_coding
chr15	100569235	100573562	100569235	100573562	-	ENST00000559169.1@LINS1	ENST00000559169.1	protein_coding	100571894,100569235	100573562,100570117	Gene ID= ENSG00000140471.16 TPM= 1.06 Transcript Type= retained_intron
chr15	100602534	100651705	100602534	100651705	+	ENST00000332783.11@ASB7	ENST00000332783.11	protein_coding	100602534,100603215,100609707,100612166,100629437,100648323	100603046,100603313,100609828,100612427,100630042,100651705	Gene ID= ENSG00000183475.12 TPM= 1.06 Transcript Type= protein_coding
chr15	100892859	100919283	100892859	100919283	-	ENST00000560351.2@AC015712.2	ENST00000560351.2	antisense_RNA	100918804,100892859	100919283,100896066	Gene ID= ENSG00000259583.2 TPM= 1.06 Transcript Type= antisense_RNA
chr15	101015990	101019911	101015990	101019911	-	transcript3844.chr15.nnic@NA	transcript3844.chr15.nnic	NA	101015990	101019911	Gene ID= novel_gene_chr15_3845 TPM= 2.12 Transcript Type= NA
chr15	101175723	101251932	101175723	101251932	-	ENST00000254190.3@CHSY1	ENST00000254190.3	protein_coding	101251137,101235082,101175723	101251932,101235577,101178980	Gene ID= ENSG00000131873.5 TPM= 14.87 Transcript Type= protein_coding
chr15	101193246	101195838	101193246	101195838	+	transcript3854.chr15.nnic@NA	transcript3854.chr15.nnic	NA	101193246	101195838	Gene ID= novel_gene_chr15_3855 TPM= 4.25 Transcript Type= NA
chr15	101275100	101277500	101275100	101277500	-	ENST00000529968.1@SELENOS	ENST00000529968.1	protein_coding	101277342,101276541,101275100	101277500,101276675,101275361	Gene ID= ENSG00000131871.14 TPM= 5.31 Transcript Type= retained_intron
chr15	101272182	101277446	101272182	101277446	-	ENST00000526049.5@SELENOS	ENST00000526049.5	protein_coding	101277342,101276541,101275255,101274592,101274420,101272182	101277446,101276675,101275361,101274681,101274495,101272856	Gene ID= ENSG00000131871.14 TPM= 140.21 Transcript Type= protein_coding
chr15	101281510	101295224	101281510	101295224	-	transcript3872.chr15.nic@SNRPA1	transcript3872.chr15.nic	protein_coding	101295097,101293025,101291962,101289814,101287656,101285726,101284967,101281510	101295224,101293172,101292040,101289922,101287702,101287010,101285060,101281782	Gene ID= ENSG00000131876.16 TPM= 2.12 Transcript Type= NA
chr15	101281510	101295246	101281510	101295246	-	transcript3874.chr15.nic@SNRPA1	transcript3874.chr15.nic	protein_coding	101295097,101287656,101286908,101286214,101285726,101284967,101281510	101295246,101287702,101287010,101286293,101285801,101285060,101281782	Gene ID= ENSG00000131876.16 TPM= 33.28 Transcript Type= NA
chr15	101281510	101295251	101281510	101295251	-	ENST00000254193.10@SNRPA1	ENST00000254193.10	protein_coding	101295097,101293025,101291962,101287656,101286908,101286214,101285726,101284967,101281510	101295251,101293172,101292040,101287702,101287010,101286293,101285801,101285060,101281782	Gene ID= ENSG00000131876.16 TPM= 54.52 Transcript Type= protein_coding
chr15	101281514	101295204	101281514	101295204	-	ENST00000559309.5@SNRPA1	ENST00000559309.5	protein_coding	101295097,101293025,101291962,101287656,101286908,101285726,101284967,101281514	101295204,101293172,101292040,101287702,101287010,101285801,101285060,101281782	Gene ID= ENSG00000131876.16 TPM= 37.53 Transcript Type= nonsense_mediated_decay
chr15	101281514	101295282	101281514	101295282	-	ENST00000558036.5@SNRPA1	ENST00000558036.5	protein_coding	101295097,101293025,101291962,101287656,101285726,101284967,101281514	101295282,101293172,101292040,101287702,101287010,101285060,101281782	Gene ID= ENSG00000131876.16 TPM= 5.31 Transcript Type= retained_intron
chr15	101303934	101489744	101303934	101489744	-	ENST00000618548.4@PCSK6	ENST00000618548.4	protein_coding	101489374,101443556,101431990,101431320,101429987,101427892,101398404,101393212,101389464,101384322,101382092,101370335,101366196,101331852,101326377,101324850,101322520,101318319,101313376,101307213,101303934	101489744,101443660,101432100,101431463,101430063,101427980,101398576,101393424,101389564,101384425,101382209,101370523,101366332,101332031,101326479,101325046,101322607,101318422,101313505,101307325,101305355	Gene ID= ENSG00000140479.16 TPM= 6.37 Transcript Type= protein_coding
chr15	101357088	101359233	101357088	101359233	-	transcript3880.chr15.nnic@NA	transcript3880.chr15.nnic	NA	101357088	101359233	Gene ID= novel_gene_chr15_3881 TPM= 2.12 Transcript Type= NA
chr15	101641846	101652391	101641846	101652391	-	ENST00000347970.7@TM2D3	ENST00000347970.7	protein_coding	101652271,101650004,101646725,101645087,101641846	101652391,101650161,101646899,101645162,101642644	Gene ID= ENSG00000184277.12 TPM= 33.46 Transcript Type= protein_coding
chr15	101641848	101652367	101641848	101652367	-	ENST00000333202.7@TM2D3	ENST00000333202.7	protein_coding	101652271,101651696,101650004,101646725,101645087,101641848	101652367,101651773,101650161,101646899,101645162,101642644	Gene ID= ENSG00000184277.12 TPM= 18.59 Transcript Type= protein_coding
chr15	101653598	101724604	101653598	101724604	-	ENST00000335968.7@TARSL2	ENST00000335968.7	protein_coding	101724091,101723093,101721126,101714840,101711880,101708793,101705683,101703859,101702239,101701086,101685896,101684075,101675600,101671671,101671486,101661712,101657785,101656922,101653598	101724604,101723164,101721322,101714963,101712001,101708910,101705747,101703937,101702385,101701184,101686062,101684237,101675737,101671748,101671586,101661816,101657857,101657036,101654730	Gene ID= ENSG00000185418.15 TPM= 7.97 Transcript Type= protein_coding
chr15	101700644	101724443	101700644	101724443	-	transcript3900.chr15.nic@TARSL2	transcript3900.chr15.nic	protein_coding	101724091,101723093,101721126,101714840,101711880,101708793,101703859,101702239,101700644	101724443,101723164,101721322,101714963,101712001,101708910,101705747,101702385,101701184	Gene ID= ENSG00000185418.15 TPM= 2.66 Transcript Type= NA
chr15	101961603	101966755	101961603	101966755	+	ENST00000559884.5@WASH3P	ENST00000559884.5	transcribed_unprocessed_pseudogene	101961603,101966070,101966522	101961641,101966223,101966755	Gene ID= ENSG00000185596.16 TPM= 4.25 Transcript Type= processed_transcript
chr16	53010	57669	53010	57669	+	ENST00000293861.7@SNRNP25	ENST00000293861.7	protein_coding	53010,55459,55777,56539,57086	54058,55549,55882,56613,57669	Gene ID= ENSG00000161981.10 TPM= 74.35 Transcript Type= protein_coding
chr16	53829	57668	53829	57668	+	ENST00000383018.7@SNRNP25	ENST00000383018.7	protein_coding	53829,55459,55777,56539,57086	54058,55549,55882,56613,57668	Gene ID= ENSG00000161981.10 TPM= 6.37 Transcript Type= protein_coding
chr16	58059	72665	58059	72665	-	transcript15.chr16.nic@RHBDF1	transcript15.chr16.nic	protein_coding	72513,64699,63587,62973,62775,62538,61798,61585,61385,61120,60439,60216,59732,59419,59249,58974,58059	72665,65039,63800,63182,62897,62695,62052,61696,61459,61281,60539,60279,59826,59494,59349,59127,58759	Gene ID= ENSG00000007384.15 TPM= 10.62 Transcript Type= NA
chr16	58059	72631	58059	72631	-	ENST00000262316.10@RHBDF1	ENST00000262316.10	protein_coding	72513,64899,64699,63587,62973,62775,62538,61798,61585,61385,61120,60439,60216,59732,59419,59249,58974,58059	72631,65039,64829,63800,63182,62897,62695,62052,61696,61459,61281,60539,60279,59826,59494,59349,59127,58759	Gene ID= ENSG00000007384.15 TPM= 50.98 Transcript Type= protein_coding
chr16	78196	85846	78196	85846	+	transcript29.chr16.nnic@MPG	transcript29.chr16.nnic	protein_coding	78196,79425,83052,85401	78333,79700,83203,85846	Gene ID= ENSG00000103152.11 TPM= 4.6 Transcript Type= NA
chr16	78063	85853	78063	85853	+	ENST00000356432.7@MPG	ENST00000356432.7	protein_coding	78063,79425,83052,85401	78333,79700,83256,85853	Gene ID= ENSG00000103152.11 TPM= 97.01 Transcript Type= protein_coding
chr16	78257	85842	78257	85842	+	ENST00000219431.4@MPG	ENST00000219431.4	protein_coding	78257,79139,79425,83052,85401	78333,79331,79700,83256,85842	Gene ID= ENSG00000103152.11 TPM= 16.28 Transcript Type= protein_coding
chr16	165978	166768	165978	166768	+	ENST00000356815.3@HBM	ENST00000356815.3	protein_coding	165978,166268,166580	166089,166472,166768	Gene ID= ENSG00000206177.6 TPM= 1.06 Transcript Type= protein_coding
chr16	172847	173710	172847	173710	+	ENST00000251595.10@HBA2	ENST00000251595.10	protein_coding	172847,173125,173472	173007,173329,173710	Gene ID= ENSG00000188536.12 TPM= 250.75 Transcript Type= protein_coding
chr16	172894	173675	172894	173675	+	ENST00000482565.1@HBA2	ENST00000482565.1	protein_coding	172894,173472	173329,173675	Gene ID= ENSG00000188536.12 TPM= 9.29 Transcript Type= retained_intron
chr16	176680	177522	176680	177522	+	ENST00000320868.9@HBA1	ENST00000320868.9	protein_coding	176680,176929,177283	176811,177133,177522	Gene ID= ENSG00000206172.8 TPM= 238.99 Transcript Type= protein_coding
chr16	188990	229451	188990	229451	-	ENST00000490762.5@LUC7L	ENST00000490762.5	protein_coding	229279,227242,220649,208078,206004,199062,192927,190662,190541,189968,188990	229451,228402,220747,208188,206147,199238,193015,190802,190570,190135,189339	Gene ID= ENSG00000007392.16 TPM= 1.06 Transcript Type= retained_intron
chr16	188975	229450	188975	229450	-	ENST00000629543.2@LUC7L	ENST00000629543.2	protein_coding	229279,228333,227242,220649,208078,206004,199062,192927,190541,189968,188975	229450,228402,227336,220747,208188,206147,199238,193015,190570,190135,189339	Gene ID= ENSG00000007392.16 TPM= 3.72 Transcript Type= protein_coding
chr16	188969	229450	188969	229450	-	ENST00000293872.12@LUC7L	ENST00000293872.12	protein_coding	229279,227242,220649,208078,206004,199062,192927,190541,189968,188969	229450,227336,220747,208188,206147,199238,193015,190570,190135,189339	Gene ID= ENSG00000007392.16 TPM= 3.72 Transcript Type= protein_coding
chr16	234800	266120	234800	266120	+	transcript85.chr16.nnic@FAM234A	transcript85.chr16.nnic	protein_coding	234800,249549,254381,259483,259969,261384,262093,262424,263262,263700,264016,264614,264811	234857,249654,254681,259599,260160,261514,262198,262553,263402,263775,264171,264716,266120	Gene ID= ENSG00000167930.15 TPM= 24.57 Transcript Type= NA
chr16	234846	266120	234846	266120	+	ENST00000301678.7@FAM234A	ENST00000301678.7	protein_coding	234846,249549,254388,259483,259969,261384,262093,262424,263262,263700,264016,264614,264811	234857,249654,254681,259599,260160,261514,262225,262553,263402,263775,264171,264716,266120	Gene ID= ENSG00000167930.15 TPM= 82.51 Transcript Type= protein_coding
chr16	268319	275971	268319	275971	-	transcript61.chr16.nnic@RGS11	transcript61.chr16.nnic	protein_coding	275838,275402,275283,274976,274803,274214,274043,273760,273475,272863,271540,271399,271202,270984,270744,270523,269503,268319	275971,275498,275333,275082,274898,274265,274101,273836,273556,272931,271569,271460,271315,271099,270831,270661,269585,269383	Gene ID= ENSG00000076344.15 TPM= 6.27 Transcript Type= NA
chr16	268319	275971	268319	275971	-	transcript67.chr16.nic@RGS11	transcript67.chr16.nic	protein_coding	275838,275402,275283,274214,274043,273760,273475,272863,271540,271399,271202,270984,270744,270523,269503,268319	275971,275498,275333,275082,274101,273836,273556,272931,271569,271460,271315,271099,270831,270661,269585,269383	Gene ID= ENSG00000076344.15 TPM= 5.74 Transcript Type= NA
chr16	268319	272617	268319	272617	-	transcript102.chr16.nic@RGS11	transcript102.chr16.nic	protein_coding	271540,271399,271202,270984,270744,270523,269503,268319	272617,271460,271315,271099,270831,270661,269585,269383	Gene ID= ENSG00000076344.15 TPM= 6.27 Transcript Type= NA
chr16	268301	275929	268301	275929	-	ENST00000397770.7@RGS11	ENST00000397770.7	protein_coding	275849,275402,275283,274976,274214,274043,273760,273475,272863,271540,271399,271202,270984,270744,270523,269503,268301	275929,275498,275333,275082,274265,274101,273836,273556,272931,271569,271460,271315,271099,270831,270661,269585,269383	Gene ID= ENSG00000076344.15 TPM= 12.21 Transcript Type= protein_coding
chr16	268311	275914	268311	275914	-	ENST00000316163.9@RGS11	ENST00000316163.9	protein_coding	275838,275402,275283,274976,274214,274043,273760,273475,272863,271540,271399,271202,270984,270744,270523,269503,268311	275914,275498,275333,275082,274265,274101,273836,273556,272931,271569,271460,271315,271099,270831,270661,269585,269383	Gene ID= ENSG00000076344.15 TPM= 9.45 Transcript Type= protein_coding
chr16	280606	283010	280606	283010	+	ENST00000219409.7@ARHGDIG	ENST00000219409.7	protein_coding	280606,281746,282025,282297,282467,282615	280753,281925,282108,282373,282530,283010	Gene ID= ENSG00000242173.8 TPM= 1.06 Transcript Type= protein_coding
chr16	287441	352699	287441	352699	-	transcript112.chr16.nnic@AXIN1	transcript112.chr16.nnic	protein_coding	352369,347083,314543,309973,304304,297722,297056,293488,291190,289440,287441	352699,347106,314683,310069,304441,298251,297226,293718,291297,289607,288248	Gene ID= ENSG00000103126.14 TPM= 2.66 Transcript Type= NA
chr16	287441	352713	287441	352713	-	transcript113.chr16.nic@AXIN1	transcript113.chr16.nic	protein_coding	352369,314543,309973,304304,297722,297056,293488,291190,289440,287441	352713,314683,310069,304441,298251,297226,293718,291297,289607,288248	Gene ID= ENSG00000103126.14 TPM= 3.72 Transcript Type= NA
chr16	287440	352659	287440	352659	-	ENST00000262320.7@AXIN1	ENST00000262320.7	protein_coding	352369,346148,314543,309973,304304,297722,297056,293488,291190,289440,287440	352659,347106,314683,310069,304441,298251,297226,293718,291297,289607,288248	Gene ID= ENSG00000103126.14 TPM= 13.28 Transcript Type= protein_coding
chr16	287441	352449	287441	352449	-	ENST00000354866.7@AXIN1	ENST00000354866.7	protein_coding	352369,346148,314543,309973,304304,297722,297056,293488,289440,287441	352449,347106,314683,310069,304441,298251,297226,293718,289607,288248	Gene ID= ENSG00000103126.14 TPM= 5.84 Transcript Type= protein_coding
chr16	366925	367418	366925	367418	-	transcript121.chr16.nnic@NA	transcript121.chr16.nnic	NA	366925	367418	Gene ID= novel_gene_chr16_122 TPM= 2.12 Transcript Type= NA
chr16	367384	370527	367384	370527	-	ENST00000199706.12@MRPL28	ENST00000199706.12	protein_coding	370499,369931,369068,368501,368328,367384	370527,370225,369220,368635,368414,367782	Gene ID= ENSG00000086504.15 TPM= 91.35 Transcript Type= protein_coding
chr16	367384	370509	367384	370509	-	ENST00000483764.5@MRPL28	ENST00000483764.5	protein_coding	370499,369931,368501,368328,367384	370509,370225,369220,368414,367782	Gene ID= ENSG00000086504.15 TPM= 11.68 Transcript Type= retained_intron
chr16	371864	381976	371864	381976	-	transcript130.chr16.nnic@TMEM8A	transcript130.chr16.nnic	protein_coding	381701,377378,377037,376544,376136,375345,375133,374756,374221,374005,372611,371864	381976,377585,377164,376812,376455,375435,375256,374892,374399,374151,372727,372283	Gene ID= ENSG00000129925.10 TPM= 5.31 Transcript Type= NA
chr16	371864	382006	371864	382006	-	transcript131.chr16.nic@TMEM8A	transcript131.chr16.nic	protein_coding	381701,377671,377378,377037,376136,375345,375133,374756,374221,374005,372611,371864	382006,377848,377585,377164,376812,375435,375256,374892,374399,374151,372727,372283	Gene ID= ENSG00000129925.10 TPM= 8.5 Transcript Type= NA
chr16	370773	381982	370773	381982	-	ENST00000431232.6@TMEM8A	ENST00000431232.6	protein_coding	381701,377671,377378,377037,376544,376136,375345,375133,374756,374221,374005,372611,370773	381982,377848,377585,377164,376812,376455,375435,375256,374892,374399,374151,372727,372283	Gene ID= ENSG00000129925.10 TPM= 13.81 Transcript Type= protein_coding
chr16	380374	381992	380374	381992	-	transcript137.chr16.nnic@NA	transcript137.chr16.nnic	NA	380374	381992	Gene ID= novel_gene_chr16_138 TPM= 3.19 Transcript Type= NA
chr16	382118	387308	382118	387308	+	transcript166.chr16.nnic@Z97634.1	transcript166.chr16.nnic	transcribed_processed_pseudogene	382118,383290,386763	382477,383429,387308	Gene ID= ENSG00000236829.9 TPM= 2.12 Transcript Type= NA
chr16	397192	400753	397192	400753	+	ENST00000620944.4@NME4	ENST00000620944.4	protein_coding	397192,398208,398990,399379,399627,400219	397313,398394,399123,399480,399739,400753	Gene ID= ENSG00000103202.12 TPM= 12.43 Transcript Type= protein_coding
chr16	397209	400506	397209	400506	+	ENST00000382940.8@NME4	ENST00000382940.8	protein_coding	397209,397879,398990,399379,399627,400219	397313,397902,399123,399480,399739,400506	Gene ID= ENSG00000103202.12 TPM= 3.4 Transcript Type= protein_coding
chr16	397209	400759	397209	400759	+	ENST00000219479.6@NME4	ENST00000219479.6	protein_coding	397209,398990,399379,399627,400219	397313,399123,399480,399739,400759	Gene ID= ENSG00000103202.12 TPM= 31.55 Transcript Type= protein_coding
chr16	397237	400648	397237	400648	+	ENST00000433358.5@NME4	ENST00000433358.5	protein_coding	397237,398990,399379,399627,400109	397313,399123,399480,399739,400648	Gene ID= ENSG00000103202.12 TPM= 1.06 Transcript Type= protein_coding
chr16	397208	400633	397208	400633	+	ENST00000460297.1@NME4	ENST00000460297.1	protein_coding	397208,398208,399379,399627,400219	397313,399123,399480,399739,400633	Gene ID= ENSG00000103202.12 TPM= 3.4 Transcript Type= retained_intron
chr16	401826	412487	401826	412487	+	ENST00000219481.9@DECR2	ENST00000219481.9	protein_coding	401826,404956,406346,407425,410243,410691,410972,411361,411890	402043,405024,406397,407560,410367,410784,411076,411578,412487	Gene ID= ENSG00000242612.6 TPM= 57.36 Transcript Type= protein_coding
chr16	425590	497448	425590	497448	+	transcript178.chr16.nic@RAB11FIP3	transcript178.chr16.nic	protein_coding	425590,461404,471295,482525,488851,491134,496824,497292	426720,461497,471389,482736,489000,491268,496859,497448	Gene ID= ENSG00000090565.15 TPM= 7.97 Transcript Type= NA
chr16	425619	523011	425619	523011	+	ENST00000262305.8@RAB11FIP3	ENST00000262305.8	protein_coding	425619,461404,471295,482525,488851,496824,503004,505524,510660,518943,519754,520122,520459,520726	426720,461497,471389,482736,489000,496859,503097,505627,510800,519024,519891,520277,520599,523011	Gene ID= ENSG00000090565.15 TPM= 9.03 Transcript Type= protein_coding
chr16	507114	507848	507114	507848	-	transcript182.chr16.nnic@NA	transcript182.chr16.nnic	NA	507114	507848	Gene ID= novel_gene_chr16_183 TPM= 2.12 Transcript Type= NA
chr16	508865	510546	508865	510546	-	transcript184.chr16.nnic@NA	transcript184.chr16.nnic	NA	508865	510546	Gene ID= novel_gene_chr16_185 TPM= 2.12 Transcript Type= NA
chr16	525155	527407	525155	527407	-	ENST00000622160.1@Z98882.1	ENST00000622160.1	lincRNA	525155	527407	Gene ID= ENSG00000277142.1 TPM= 1.06 Transcript Type= lincRNA
chr16	538948	544799	538948	544799	-	transcript189.chr16.nnic@NA	transcript189.chr16.nnic	NA	538948	544799	Gene ID= novel_gene_chr16_190 TPM= 16.99 Transcript Type= NA
chr16	569947	584136	569947	584136	+	ENST00000321878.9@PIGQ	ENST00000321878.9	protein_coding	569947,574066,575839,576134,578379,578785,579069,580183,580858,582248,582883	570096,574763,575970,576254,578505,578938,579180,580263,580972,582309,584136	Gene ID= ENSG00000007541.16 TPM= 23.37 Transcript Type= protein_coding
chr16	570018	584109	570018	584109	+	ENST00000026218.9@PIGQ	ENST00000026218.9	protein_coding	570018,574066,575839,576134,578379,578785,579069,580183,580858,582883	570096,574763,575970,576254,578505,578938,579180,580263,580972,584109	Gene ID= ENSG00000007541.16 TPM= 12.21 Transcript Type= protein_coding
chr16	569976	577234	569976	577234	+	ENST00000422307.6@PIGQ	ENST00000422307.6	protein_coding	569976,574066,575839,576134	570096,574763,575970,577234	Gene ID= ENSG00000007541.16 TPM= 4.25 Transcript Type= protein_coding
chr16	581762	583742	581762	583742	-	transcript228.chr16.nnic@NA	transcript228.chr16.nnic	NA	581762	583742	Gene ID= novel_gene_chr16_229 TPM= 23.9 Transcript Type= NA
chr16	587772	589272	587772	589272	-	transcript230.chr16.nnic@NA	transcript230.chr16.nnic	NA	587772	589272	Gene ID= novel_gene_chr16_231 TPM= 4.25 Transcript Type= NA
chr16	590057	629271	590057	629271	+	transcript199.chr16.nnic@RAB40C	transcript199.chr16.nnic	protein_coding	590057,590261,594281,596317,617208,618200,625432,625899,627342	590119,590433,595567,596448,617268,618260,625509,626121,629271	Gene ID= ENSG00000197562.9 TPM= 7.51 Transcript Type= NA
chr16	594819	629271	594819	629271	+	transcript214.chr16.nnic@RAB40C	transcript214.chr16.nnic	protein_coding	594819,617208,618200,625432,625900,627342	596448,617268,618260,625515,626121,629271	Gene ID= ENSG00000197562.9 TPM= 19.54 Transcript Type= NA
chr16	590057	629271	590057	629271	+	transcript220.chr16.nnic@RAB40C	transcript220.chr16.nnic	protein_coding	590057,590261,625432,625899,627342	590119,590433,625509,626121,629271	Gene ID= ENSG00000197562.9 TPM= 9.63 Transcript Type= NA
chr16	590077	629271	590077	629271	+	ENST00000538492.5@RAB40C	ENST00000538492.5	protein_coding	590077,590261,617208,618200,625432,625899,627342	590119,590433,617268,618260,625509,626121,629271	Gene ID= ENSG00000197562.9 TPM= 16.36 Transcript Type= protein_coding
chr16	590089	629272	590089	629272	+	ENST00000248139.7@RAB40C	ENST00000248139.7	protein_coding	590089,617208,618200,625432,625899,627342	590433,617268,618260,625509,626121,629272	Gene ID= ENSG00000197562.9 TPM= 19.19 Transcript Type= protein_coding
chr16	634430	636369	634430	636369	-	transcript234.chr16.nic@METTL26	transcript234.chr16.nic	protein_coding	636094,635518,635281,634889,634719,634430	636369,635774,635340,635063,634797,634644	Gene ID= ENSG00000130731.15 TPM= 5.05 Transcript Type= NA
chr16	634430	636302	634430	636302	-	ENST00000301686.12@METTL26	ENST00000301686.12	protein_coding	636094,635612,635281,634889,634719,634430	636302,635774,635340,634956,634797,634644	Gene ID= ENSG00000130731.15 TPM= 25.49 Transcript Type= protein_coding
chr16	634438	636351	634438	636351	-	ENST00000397664.8@METTL26	ENST00000397664.8	protein_coding	636094,635281,634719,634438	636351,635340,634797,634644	Gene ID= ENSG00000130731.15 TPM= 2.39 Transcript Type= protein_coding
chr16	634429	636342	634429	636342	-	ENST00000338401.8@METTL26	ENST00000338401.8	protein_coding	636094,634719,634429	636342,634797,634644	Gene ID= ENSG00000130731.15 TPM= 6.37 Transcript Type= protein_coding
chr16	634430	636302	634430	636302	-	ENST00000397666.6@METTL26	ENST00000397666.6	protein_coding	636094,635612,635281,634719,634430	636302,635774,635340,634797,634644	Gene ID= ENSG00000130731.15 TPM= 11.68 Transcript Type= protein_coding
chr16	641911	648474	641911	648474	+	transcript251.chr16.nnic@MCRIP2	transcript251.chr16.nnic	protein_coding	641911,646472,647417,647783,648120	642043,646608,647544,647884,648474	Gene ID= ENSG00000172366.19 TPM= 12.43 Transcript Type= NA
chr16	643541	648474	643541	648474	+	transcript255.chr16.nic@MCRIP2	transcript255.chr16.nic	protein_coding	643541,647417,647783,648120	646608,647544,647884,648474	Gene ID= ENSG00000172366.19 TPM= 72.76 Transcript Type= NA
chr16	646747	648474	646747	648474	+	ENST00000575894.1@MCRIP2	ENST00000575894.1	protein_coding	646747	648474	Gene ID= ENSG00000172366.19 TPM= 4.25 Transcript Type= retained_intron
chr16	641813	648474	641813	648474	+	ENST00000307650.8@MCRIP2	ENST00000307650.8	protein_coding	641813,642120,647417,647783,648120	642043,642249,647544,647884,648474	Gene ID= ENSG00000172366.19 TPM= 81.47 Transcript Type= protein_coding
chr16	641846	648474	641846	648474	+	ENST00000491999.5@MCRIP2	ENST00000491999.5	protein_coding	641846,642120,646472,647417,647783,648120	642043,642249,646608,647544,647884,648474	Gene ID= ENSG00000172366.19 TPM= 17.74 Transcript Type= nonsense_mediated_decay
chr16	641929	648474	641929	648474	+	ENST00000474840.5@MCRIP2	ENST00000474840.5	protein_coding	641929,642120,647783,648120	642043,642249,647884,648474	Gene ID= ENSG00000172366.19 TPM= 4.99 Transcript Type= nonsense_mediated_decay
chr16	649311	661075	649311	661075	+	ENST00000552943.5@WDR90	ENST00000552943.5	protein_coding	649311,649991,650254,650539,650995,651199,651644,651824,652467,653341,653525,653746,655307,655573,655773,656732,657091,657762,658183,658525,658896,659086,659245,660058,660612,661051	649854,650167,650362,650709,651103,651266,651747,652039,652535,653451,653670,655147,655468,655703,656537,656871,657221,657892,658344,658653,659011,659126,659376,660161,660714,661075	Gene ID= ENSG00000161996.18 TPM= 3.19 Transcript Type= retained_intron
chr16	668080	674125	668080	674125	+	transcript276.chr16.nic@RHOT2	transcript276.chr16.nic	protein_coding	668080,668353,668488,668656,669553,670123,670249,670456,670675,670892,671697,671860,672084,672254,672489,672703,672928,673480	668236,668411,668569,668699,669606,670175,670357,670557,670773,671203,671781,672002,672181,672384,672566,672825,673130,674125	Gene ID= ENSG00000140983.13 TPM= 41.91 Transcript Type= NA
chr16	668080	674125	668080	674125	+	transcript283.chr16.nic@RHOT2	transcript283.chr16.nic	protein_coding	668080,668353,668488,668656,670123,670249,670456,670675,670892,671083,671697,671860,672084,672254,672489,672703,672928,673480	668236,668411,668569,668699,670175,670357,670557,670773,671000,671203,671781,672002,672181,672384,672566,672825,673130,674125	Gene ID= ENSG00000140983.13 TPM= 17.87 Transcript Type= NA
chr16	668080	674125	668080	674125	+	transcript291.chr16.nic@RHOT2	transcript291.chr16.nic	protein_coding	668080,668353,668488,668656,669553,670123,670249,670456,670774,671697,671860,672084,672254,672489,672703,672928,673480	668236,668411,668569,668699,669606,670175,670357,670557,671203,671781,672002,672181,672384,672566,672825,673130,674125	Gene ID= ENSG00000140983.13 TPM= 11.51 Transcript Type= NA
chr16	668086	674174	668086	674174	+	ENST00000315082.8@RHOT2	ENST00000315082.8	protein_coding	668086,668353,668488,668656,669553,670123,670249,670456,670675,670892,671083,671697,671860,672084,672254,672489,672703,672928,673480	668236,668411,668569,668699,669606,670175,670357,670557,670773,671000,671203,671781,672002,672181,672384,672566,672825,673130,674174	Gene ID= ENSG00000140983.13 TPM= 120.51 Transcript Type= protein_coding
chr16	675666	678268	675666	678268	+	ENST00000352681.7@RHBDL1	ENST00000352681.7	protein_coding	675666,676336,676672,676971,677276,677459,677639,677781	675829,676497,676896,677119,677388,677559,677699,678268	Gene ID= ENSG00000103269.13 TPM= 3.19 Transcript Type= protein_coding
chr16	680224	682746	680224	682746	+	ENST00000565677.5@STUB1	ENST00000565677.5	protein_coding	680224,681063,681438,681793,682020,682165,682364	680684,681350,681603,681880,682076,682281,682746	Gene ID= ENSG00000103266.10 TPM= 7.44 Transcript Type= protein_coding
chr16	680407	682746	680407	682746	+	transcript364.chr16.nic@STUB1	transcript364.chr16.nic	protein_coding	680407,681152,681438,681793,682020,682165	680684,681350,681603,681880,682076,682746	Gene ID= ENSG00000103266.10 TPM= 10.62 Transcript Type= NA
chr16	681671	684439	681671	684439	-	ENST00000412368.6@JMJD8	ENST00000412368.6	protein_coding	684234,684066,683861,683685,683530,683322,683167,682953,681671	684439,684155,683909,683781,683598,683441,683234,683087,682874	Gene ID= ENSG00000161999.11 TPM= 118.4 Transcript Type= protein_coding
chr16	681671	684355	681671	684355	-	transcript342.chr16.nic@JMJD8	transcript342.chr16.nic	protein_coding	684234,683861,683685,683530,683322,683167,682953,681671	684355,684155,683781,683598,683441,683234,683087,682874	Gene ID= ENSG00000161999.11 TPM= 16.43 Transcript Type= NA
chr16	681671	684355	681671	684355	-	transcript343.chr16.nic@JMJD8	transcript343.chr16.nic	protein_coding	684234,683910,683685,683530,683322,683167,682953,681671	684355,684155,683781,683598,683441,683234,683087,682874	Gene ID= ENSG00000161999.11 TPM= 12.71 Transcript Type= NA
chr16	681699	684344	681699	684344	-	ENST00000568689.5@JMJD8	ENST00000568689.5	protein_coding	684234,684066,683861,683685,683322,683167,682958,681699	684344,684155,683909,683781,683598,683234,683087,682874	Gene ID= ENSG00000161999.11 TPM= 14.87 Transcript Type= retained_intron
chr16	684622	690400	684622	690400	-	ENST00000293883.8@WDR24	ENST00000293883.8	protein_coding	689160,687562,686744,686068,685869,685679,685257,684992,684622	690400,687739,687416,686186,685990,685783,685597,685176,684902	Gene ID= ENSG00000127580.15 TPM= 45.67 Transcript Type= protein_coding
chr16	715111	717480	715111	717480	+	transcript383.chr16.nnic@METRN	transcript383.chr16.nnic	protein_coding	715111,715584,716943,717071	715393,715984,716992,717480	Gene ID= ENSG00000103260.8 TPM= 8.5 Transcript Type= NA
chr16	715115	719655	715115	719655	+	ENST00000568223.6@METRN	ENST00000568223.6	protein_coding	715115,715584,716933,717071	715393,715984,716992,719655	Gene ID= ENSG00000103260.8 TPM= 20.18 Transcript Type= protein_coding
chr16	720975	722601	720975	722601	+	ENST00000569529.5@FAM173A	ENST00000569529.5	protein_coding	720975,721598,721801,722084,722309	721436,721702,721941,722134,722601	Gene ID= ENSG00000103254.9 TPM= 37.18 Transcript Type= protein_coding
chr16	717838	722590	717838	722590	+	transcript386.chr16.nic@FAM173A	transcript386.chr16.nic	protein_coding	717838,721801,722084,722309	721702,721941,722134,722590	Gene ID= ENSG00000103254.9 TPM= 6.37 Transcript Type= NA
chr16	721143	722589	721143	722589	+	transcript389.chr16.nnic@FAM173A	transcript389.chr16.nnic	protein_coding	721143,721598,721801,722309	721509,721702,722083,722589	Gene ID= ENSG00000103254.9 TPM= 2.12 Transcript Type= NA
chr16	721142	722573	721142	722573	+	ENST00000219535.7@FAM173A	ENST00000219535.7	protein_coding	721142,721598,721801,722309	721436,721702,721941,722573	Gene ID= ENSG00000103254.9 TPM= 8.5 Transcript Type= protein_coding
chr16	721163	722589	721163	722589	+	transcript400.chr16.nnic@NA	transcript400.chr16.nnic	NA	721163	722589	Gene ID= novel_gene_chr16_401 TPM= 2.12 Transcript Type= NA
chr16	727016	729715	727016	729715	+	transcript402.chr16.nic@HAGHL	transcript402.chr16.nic	protein_coding	727016,727412,727965,728116,728316,728504,728794,729009,729288	727175,727614,728029,728233,728424,728604,728895,729088,729715	Gene ID= ENSG00000103253.17 TPM= 8.5 Transcript Type= NA
chr16	727032	729715	727032	729715	+	transcript403.chr16.nnic@HAGHL	transcript403.chr16.nnic	protein_coding	727032,727965,728116,728316,728504,728794,729009,729288	727614,728029,728233,728424,728604,728868,729088,729715	Gene ID= ENSG00000103253.17 TPM= 2.12 Transcript Type= NA
chr16	727271	729715	727271	729715	+	ENST00000389703.7@HAGHL	ENST00000389703.7	protein_coding	727271,727965,728116,728316,728504,728794,729009,729288	727614,728029,728233,728424,728604,728895,729088,729715	Gene ID= ENSG00000103253.17 TPM= 10.62 Transcript Type= protein_coding
chr16	729753	741002	729753	741002	-	ENST00000251588.6@NARFL	ENST00000251588.6	protein_coding	740920,739643,737186,736266,734737,734229,733298,732301,731565,730843,729753	741002,739738,737329,736398,734871,734347,733427,732373,731702,731000,730655	Gene ID= ENSG00000103245.13 TPM= 61.61 Transcript Type= protein_coding
chr16	784974	788383	784974	788383	-	ENST00000007264.6@RPUSD1	ENST00000007264.6	protein_coding	788256,787556,787354,787077,786827,784974	788383,787744,787477,787179,786928,786377	Gene ID= ENSG00000007376.7 TPM= 20.18 Transcript Type= protein_coding
chr16	784991	788371	784991	788371	-	ENST00000565809.5@RPUSD1	ENST00000565809.5	protein_coding	788256,787556,787354,786827,784991	788371,787744,787477,786928,786377	Gene ID= ENSG00000007376.7 TPM= 5.31 Transcript Type= protein_coding
chr16	785014	788397	785014	788397	-	ENST00000567114.5@RPUSD1	ENST00000567114.5	protein_coding	788256,787354,787077,786827,785014	788397,787477,787179,786928,786377	Gene ID= ENSG00000007376.7 TPM= 7.44 Transcript Type= protein_coding
chr16	788622	798074	788622	798074	+	ENST00000262315.13@CHTF18	ENST00000262315.13	protein_coding	788622,788931,789210,789547,790177,790347,790525,791161,791851,792224,792439,792718,792966,793144,794054,795132,795685,795947,796717,796961,797694,797839	788775,789125,789360,789715,790269,790399,790666,791370,791948,792347,792590,792811,793064,793274,794201,795356,795834,796077,796861,797092,797751,798074	Gene ID= ENSG00000127586.16 TPM= 4.25 Transcript Type= protein_coding
chr16	853634	970999	853634	970999	-	ENST00000262301.15@LMF1	ENST00000262301.15	protein_coding	970788,954357,934244,910931,893007,879570,871161,870729,869883,868944,853634	970999,954666,934254,911079,893072,879737,871341,870882,870066,869056,854706	Gene ID= ENSG00000103227.18 TPM= 5.31 Transcript Type= protein_coding
chr16	954748	956859	954748	956859	+	transcript433.chr16.nnic@NA	transcript433.chr16.nnic	NA	954748	956859	Gene ID= novel_gene_chr16_434 TPM= 4.25 Transcript Type= NA
chr16	975761	980913	975761	980913	-	ENST00000562570.1@AC009041.2	ENST00000562570.1	lincRNA	979025,975761	980913,977093	Gene ID= ENSG00000260807.6 TPM= 3.19 Transcript Type= lincRNA
chr16	981808	986979	981808	986979	+	ENST00000293894.3@SOX8	ENST00000293894.3	protein_coding	981808,983728,984701	982344,983960,986979	Gene ID= ENSG00000005513.9 TPM= 9.56 Transcript Type= protein_coding
chr16	1228336	1230184	1228336	1230184	-	ENST00000606293.5@TPSB2	ENST00000606293.5	protein_coding	1230162,1229891,1229566,1229191,1228900,1228336	1230184,1229951,1229737,1229456,1229063,1228814	Gene ID= ENSG00000197253.13 TPM= 2.66 Transcript Type= protein_coding
chr16	1228337	1230162	1228337	1230162	-	ENST00000612142.1@TPSB2	ENST00000612142.1	protein_coding	1229891,1229566,1229191,1228900,1228337	1230162,1229737,1229456,1229063,1228814	Gene ID= ENSG00000197253.13 TPM= 2.66 Transcript Type= protein_coding
chr16	1240696	1242554	1240696	1242554	+	ENST00000338844.7@TPSAB1	ENST00000338844.7	protein_coding	1240696,1240939,1241153,1241434,1241827,1242076	1240728,1240999,1241324,1241699,1241990,1242554	Gene ID= ENSG00000172236.16 TPM= 7.44 Transcript Type= protein_coding
chr16	1308880	1327018	1308880	1327018	+	ENST00000355803.8@UBE2I	ENST00000355803.8	protein_coding	1308880,1314020,1314293,1315654,1320174,1320438,1324730	1309419,1314096,1314376,1315726,1320283,1320517,1327018	Gene ID= ENSG00000103275.19 TPM= 3.72 Transcript Type= protein_coding
chr16	1309636	1317125	1309636	1317125	+	ENST00000473256.6@UBE2I	ENST00000473256.6	protein_coding	1309636,1314020,1314293,1315654	1309773,1314096,1314376,1317125	Gene ID= ENSG00000103275.19 TPM= 2.12 Transcript Type= retained_intron
chr16	1309635	1327018	1309635	1327018	+	ENST00000397515.6@UBE2I	ENST00000397515.6	protein_coding	1309635,1312347,1314020,1314293,1315654,1320174,1320438,1324730	1309773,1312603,1314096,1314376,1315726,1320283,1320517,1327018	Gene ID= ENSG00000103275.19 TPM= 4.78 Transcript Type= protein_coding
chr16	1343371	1349438	1343371	1349438	+	transcript456.chr16.nic@BAIAP3	transcript456.chr16.nic	protein_coding	1343371,1344022,1344227,1344469,1344601,1344798,1344969,1345249,1345747,1345986,1346170,1346442,1346605,1346847,1347298,1347545,1347701,1347894,1348096,1348379	1343513,1344146,1344317,1344525,1344698,1344849,1345099,1345372,1345890,1346078,1346361,1346510,1346684,1346955,1347369,1347625,1347821,1348017,1348301,1349438	Gene ID= ENSG00000007516.13 TPM= 2.12 Transcript Type= NA
chr16	1349240	1351911	1349240	1351911	-	ENST00000007390.2@TSR3	ENST00000007390.2	protein_coding	1351693,1351379,1350807,1350058,1349889,1349240	1351911,1351598,1351000,1350234,1349952,1349608	Gene ID= ENSG00000007520.3 TPM= 197.56 Transcript Type= protein_coding
chr16	1349240	1351910	1349240	1351910	-	transcript459.chr16.nic@TSR3	transcript459.chr16.nic	protein_coding	1351693,1351379,1350807,1350058,1349240	1351910,1351598,1351000,1350234,1349608	Gene ID= ENSG00000007520.3 TPM= 63.73 Transcript Type= NA
chr16	1351930	1363350	1351930	1363350	+	transcript463.chr16.nic@GNPTG	transcript463.chr16.nic	protein_coding	1351930,1352102,1352239,1357700,1361743,1361872,1362038,1362206,1362452,1362611,1362825,1362997	1352017,1352159,1352306,1357832,1361797,1361955,1362131,1362320,1362534,1362742,1362906,1363350	Gene ID= ENSG00000090581.9 TPM= 2.12 Transcript Type= NA
chr16	1351923	1364113	1351923	1364113	+	ENST00000204679.8@GNPTG	ENST00000204679.8	protein_coding	1351923,1352102,1352239,1361743,1361872,1362038,1362206,1362452,1362611,1362825,1362997	1352017,1352159,1352306,1361797,1361955,1362131,1362320,1362534,1362742,1362906,1364113	Gene ID= ENSG00000090581.9 TPM= 65.85 Transcript Type= protein_coding
chr16	1351951	1352499	1351951	1352499	+	ENST00000527137.2@GNPTG	ENST00000527137.2	protein_coding	1351951,1352102,1352239	1352017,1352159,1352499	Gene ID= ENSG00000090581.9 TPM= 1.06 Transcript Type= protein_coding
chr16	1419744	1420800	1419744	1420800	-	ENST00000442039.2@C16orf91	ENST00000442039.2	protein_coding	1420692,1419744	1420800,1420612	Gene ID= ENSG00000174109.4 TPM= 41.42 Transcript Type= protein_coding
chr16	1419752	1420756	1419752	1420756	-	ENST00000563974.1@C16orf91	ENST00000563974.1	protein_coding	1419752	1420756	Gene ID= ENSG00000174109.4 TPM= 7.44 Transcript Type= retained_intron
chr16	1444935	1475580	1444935	1475580	-	ENST00000382745.8@CLCN7	ENST00000382745.8	protein_coding	1474834,1465267,1461603,1461405,1460816,1460418,1459107,1457694,1457254,1456113,1455731,1455134,1454411,1453834,1452755,1451623,1450497,1449276,1448966,1448681,1448355,1447655,1447392,1447006,1444935	1475580,1465338,1461674,1461470,1460948,1460527,1459187,1457756,1457337,1456206,1455795,1455250,1454465,1453894,1452893,1451716,1450666,1449327,1449093,1448766,1448484,1447714,1447568,1447086,1446717	Gene ID= ENSG00000103249.17 TPM= 23.37 Transcript Type= protein_coding
chr16	1493558	1510457	1493558	1510457	+	transcript496.chr16.nic@TELO2	transcript496.chr16.nic	protein_coding	1493558,1494281,1495346,1497036,1497361,1499231,1500096,1500347,1500563,1501420,1501663,1502047,1502313,1502645,1502931,1505410,1506238,1506952,1507306,1507601,1509830	1493605,1494616,1495623,1497104,1497508,1499333,1500164,1500488,1500699,1501499,1501773,1502135,1502404,1502761,1503002,1505601,1506329,1507051,1507370,1507716,1510457	Gene ID= ENSG00000100726.14 TPM= 4.78 Transcript Type= NA
chr16	1493558	1510457	1493558	1510457	+	transcript498.chr16.nnic@TELO2	transcript498.chr16.nnic	protein_coding	1493558,1494246,1495346,1497036,1497361,1499231,1500096,1500347,1500563,1501663,1502047,1502313,1502645,1502931,1505410,1506238,1506952,1507306,1507601,1509830	1493605,1494616,1495623,1497104,1497508,1499333,1500164,1500488,1500699,1501773,1502135,1502404,1502761,1503002,1505601,1506329,1507051,1507370,1507716,1510457	Gene ID= ENSG00000100726.14 TPM= 5.84 Transcript Type= NA
chr16	1493568	1510457	1493568	1510457	+	transcript499.chr16.nic@TELO2	transcript499.chr16.nic	protein_coding	1493568,1494246,1495346,1497036,1497361,1499231,1500096,1500347,1501420,1501663,1502047,1502313,1502645,1502931,1505410,1506238,1506952,1507306,1507601,1509830	1493605,1494616,1495623,1497104,1497508,1499333,1500164,1500699,1501499,1501773,1502135,1502404,1502761,1503002,1505601,1506329,1507051,1507370,1507716,1510457	Gene ID= ENSG00000100726.14 TPM= 2.66 Transcript Type= NA
chr16	1493363	1510457	1493363	1510457	+	ENST00000262319.10@TELO2	ENST00000262319.10	protein_coding	1493363,1494246,1495346,1497036,1497361,1499231,1500096,1500347,1500563,1501420,1501663,1502047,1502313,1502645,1502931,1505410,1506238,1506952,1507306,1507601,1509830	1493605,1494616,1495623,1497104,1497508,1499333,1500164,1500488,1500699,1501499,1501773,1502135,1502404,1502761,1503002,1505601,1506329,1507051,1507370,1507716,1510457	Gene ID= ENSG00000100726.14 TPM= 39.83 Transcript Type= protein_coding
chr16	1510427	1612110	1510427	1612110	-	ENST00000426508.6@IFT140	ENST00000426508.6	protein_coding	1611968,1610664,1607120,1602370,1592467,1592176,1589605,1587933,1587198,1586130,1584217,1583314,1580759,1571407,1568217,1566161,1563997,1561985,1557935,1526619,1525887,1525231,1524784,1524552,1523828,1523518,1520602,1520131,1519881,1518216,1510427	1612110,1610853,1607297,1602591,1592588,1592318,1589780,1588024,1587304,1586275,1584420,1583386,1580850,1571534,1568334,1566291,1564162,1562116,1558134,1526796,1526077,1525326,1524916,1524695,1523956,1523700,1520808,1520343,1520047,1518357,1511150	Gene ID= ENSG00000187535.13 TPM= 9.03 Transcript Type= protein_coding
chr16	1553541	1610661	1553541	1610661	-	transcript502.chr16.nic@IFT140	transcript502.chr16.nic	protein_coding	1610417,1607120,1602370,1592467,1592176,1589605,1587933,1587198,1586130,1584217,1583314,1580759,1571407,1568217,1566161,1563997,1561985,1557935,1553541	1610661,1607297,1602591,1592588,1592318,1589780,1588024,1587304,1586275,1584420,1583386,1580850,1571534,1568334,1566291,1564162,1562116,1558134,1554040	Gene ID= ENSG00000187535.13 TPM= 2.12 Transcript Type= NA
chr16	1510427	1533494	1510427	1533494	-	ENST00000361339.9@IFT140	ENST00000361339.9	protein_coding	1533015,1526619,1525887,1525231,1524784,1524552,1523828,1523518,1520602,1520131,1519881,1518216,1510427	1533494,1526796,1526077,1525326,1524916,1524695,1523956,1523700,1520808,1520343,1520047,1518357,1511150	Gene ID= ENSG00000187535.13 TPM= 3.72 Transcript Type= protein_coding
chr16	1533573	1555580	1533573	1555580	+	ENST00000566264.1@TMEM204	ENST00000566264.1	protein_coding	1533573,1541921,1554782	1534555,1542076,1555580	Gene ID= ENSG00000131634.13 TPM= 40.36 Transcript Type= protein_coding
chr16	1534823	1537379	1534823	1537379	-	transcript513.chr16.nnic@NA	transcript513.chr16.nnic	NA	1534823	1537379	Gene ID= novel_gene_chr16_514 TPM= 2.12 Transcript Type= NA
chr16	1678256	1702086	1678256	1702086	+	ENST00000248098.7@JPT2	ENST00000248098.7	protein_coding	1678256,1685439,1691843,1697812,1698811	1678356,1685587,1691985,1697860,1702086	Gene ID= ENSG00000206053.12 TPM= 5.31 Transcript Type= protein_coding
chr16	1706178	1730073	1706178	1730073	+	transcript532.chr16.nic@MAPK8IP3	transcript532.chr16.nic	protein_coding	1706178,1724557,1729138,1729487	1706657,1724677,1729208,1730073	Gene ID= ENSG00000138834.12 TPM= 3.19 Transcript Type= NA
chr16	1770344	1771561	1770344	1771561	-	ENST00000563498.1@NME3	ENST00000563498.1	protein_coding	1771280,1771070,1770881,1770344	1771561,1771171,1770993,1770766	Gene ID= ENSG00000103024.7 TPM= 6.37 Transcript Type= protein_coding
chr16	1770286	1771730	1770286	1771730	-	ENST00000219302.7@NME3	ENST00000219302.7	protein_coding	1771489,1771280,1771070,1770881,1770286	1771730,1771410,1771171,1770993,1770766	Gene ID= ENSG00000103024.7 TPM= 12.75 Transcript Type= protein_coding
chr16	1770377	1771557	1770377	1771557	-	ENST00000566600.1@NME3	ENST00000566600.1	protein_coding	1771489,1771070,1770881,1770377	1771557,1771410,1770993,1770766	Gene ID= ENSG00000103024.7 TPM= 4.25 Transcript Type= retained_intron
chr16	1770342	1771510	1770342	1771510	-	ENST00000568561.5@NME3	ENST00000568561.5	protein_coding	1771489,1771280,1771070,1770881,1770342	1771510,1771410,1771191,1770993,1770766	Gene ID= ENSG00000103024.7 TPM= 3.19 Transcript Type= nonsense_mediated_decay
chr16	1771890	1773155	1771890	1773155	-	ENST00000397375.6@MRPS34	ENST00000397375.6	protein_coding	1772799,1772604,1771890	1773155,1772646,1772513	Gene ID= ENSG00000074071.14 TPM= 140.21 Transcript Type= protein_coding
chr16	1771897	1773159	1771897	1773159	-	transcript539.chr16.nic@MRPS34	transcript539.chr16.nic	protein_coding	1772799,1771897	1773159,1772646	Gene ID= ENSG00000074071.14 TPM= 3.19 Transcript Type= NA
chr16	1771896	1772698	1771896	1772698	-	ENST00000569585.1@MRPS34	ENST00000569585.1	protein_coding	1772604,1771896	1772698,1772513	Gene ID= ENSG00000074071.14 TPM= 3.19 Transcript Type= retained_intron
chr16	1771890	1773150	1771890	1773150	-	ENST00000177742.7@MRPS34	ENST00000177742.7	protein_coding	1772799,1772604,1771890	1773150,1772646,1772534	Gene ID= ENSG00000074071.14 TPM= 8.5 Transcript Type= protein_coding
chr16	1776718	1782505	1776718	1782505	-	transcript561.chr16.nic@SPSB3	transcript561.chr16.nic	protein_coding	1781766,1781358,1778435,1778134,1777946,1777747,1776718	1782505,1781495,1778612,1778321,1778048,1777872,1777443	Gene ID= ENSG00000162032.15 TPM= 20.45 Transcript Type= NA
chr16	1776712	1782820	1776712	1782820	-	ENST00000566339.5@SPSB3	ENST00000566339.5	protein_coding	1782502,1781358,1778435,1778134,1777946,1777747,1776712	1782820,1781495,1778612,1778321,1778048,1777872,1777443	Gene ID= ENSG00000162032.15 TPM= 74.62 Transcript Type= protein_coding
chr16	1776714	1782505	1776714	1782505	-	ENST00000564709.5@SPSB3	ENST00000564709.5	protein_coding	1781766,1781358,1778134,1777946,1777747,1776714	1782505,1781495,1778612,1778048,1777872,1777443	Gene ID= ENSG00000162032.15 TPM= 3.98 Transcript Type= retained_intron
chr16	1776718	1782557	1776718	1782557	-	ENST00000567868.5@SPSB3	ENST00000567868.5	protein_coding	1782502,1781358,1778134,1777946,1777747,1776718	1782557,1781495,1778612,1778048,1777872,1777443	Gene ID= ENSG00000162032.15 TPM= 17.79 Transcript Type= retained_intron
chr16	1776718	1782552	1776718	1782552	-	ENST00000569380.5@SPSB3	ENST00000569380.5	protein_coding	1782502,1781358,1777747,1776718	1782552,1781495,1778612,1777443	Gene ID= ENSG00000162032.15 TPM= 4.25 Transcript Type= retained_intron
chr16	1782901	1789191	1782901	1789191	+	ENST00000262302.13@NUBP2	ENST00000262302.13	protein_coding	1782901,1786537,1786757,1787677,1787941,1788138,1788569	1783036,1786655,1786955,1787831,1788051,1788207,1789191	Gene ID= ENSG00000095906.16 TPM= 47.8 Transcript Type= protein_coding
chr16	1782932	1789181	1782932	1789181	+	ENST00000568834.5@NUBP2	ENST00000568834.5	protein_coding	1782932,1786537,1787677,1787941,1788138,1788569	1783036,1786655,1787831,1788051,1788207,1789181	Gene ID= ENSG00000095906.16 TPM= 41.42 Transcript Type= nonsense_mediated_decay
chr16	1809103	1826841	1809103	1826841	-	ENST00000397353.6@HAGH	ENST00000397353.6	protein_coding	1826712,1826507,1822865,1822300,1819897,1819115,1817168,1816893,1809754,1809103	1826841,1826602,1823037,1822364,1820014,1819223,1817271,1816994,1809833,1809382	Gene ID= ENSG00000063854.12 TPM= 133.83 Transcript Type= protein_coding
chr16	1826967	1840207	1826967	1840207	+	ENST00000382666.5@FAHD1	ENST00000382666.5	protein_coding	1826967,1838016,1839262	1827865,1838134,1840207	Gene ID= ENSG00000180185.11 TPM= 2.12 Transcript Type= protein_coding
chr16	1826967	1840207	1826967	1840207	+	ENST00000382668.7@FAHD1	ENST00000382668.7	protein_coding	1826967,1839262	1827865,1840207	Gene ID= ENSG00000180185.11 TPM= 1.06 Transcript Type= protein_coding
chr16	1826941	1828914	1826941	1828914	+	ENST00000427358.3@FAHD1	ENST00000427358.3	protein_coding	1826941	1828914	Gene ID= ENSG00000180185.11 TPM= 37.18 Transcript Type= protein_coding
chr16	1938210	1943326	1938210	1943326	-	ENST00000361871.7@MSRB1	ENST00000361871.7	protein_coding	1943102,1941257,1940778,1938210	1943326,1941405,1940892,1939143	Gene ID= ENSG00000198736.11 TPM= 137.02 Transcript Type= protein_coding
chr16	1943974	1954726	1943974	1954726	-	ENST00000268661.7@RPL3L	ENST00000268661.7	protein_coding	1954629,1953956,1952874,1950844,1947194,1946938,1946625,1945835,1945499,1943974	1954726,1954148,1953042,1950979,1947380,1947098,1946726,1945930,1945618,1944893	Gene ID= ENSG00000140986.7 TPM= 135.64 Transcript Type= protein_coding
chr16	1959508	1961975	1959508	1961975	+	ENST00000268668.10@NDUFB10	ENST00000268668.10	protein_coding	1959508,1961153,1961497,1961797	1959754,1961291,1961636,1961975	Gene ID= ENSG00000140990.14 TPM= 362.38 Transcript Type= protein_coding
chr16	1959543	1961975	1959543	1961975	+	ENST00000543683.6@NDUFB10	ENST00000543683.6	protein_coding	1959543,1961153,1961497	1959754,1961291,1961975	Gene ID= ENSG00000140990.14 TPM= 4.96 Transcript Type= protein_coding
chr16	1959552	1961975	1959552	1961975	+	ENST00000569148.1@NDUFB10	ENST00000569148.1	protein_coding	1959552,1961153,1961497,1961797	1959754,1961258,1961636,1961975	Gene ID= ENSG00000140990.14 TPM= 6.55 Transcript Type= protein_coding
chr16	1962052	1964860	1962052	1964860	-	ENST00000343262.8@RPS2	ENST00000343262.8	protein_coding	1964807,1964449,1964276,1963149,1962736,1962497,1962052	1964860,1964628,1964365,1963256,1962909,1962656,1962270	Gene ID= ENSG00000140988.15 TPM= 1690.43 Transcript Type= protein_coding
chr16	1962061	1964631	1962061	1964631	-	ENST00000527871.5@RPS2	ENST00000527871.5	protein_coding	1964449,1964276,1962497,1962061	1964631,1964365,1963256,1962270	Gene ID= ENSG00000140988.15 TPM= 4.78 Transcript Type= retained_intron
chr16	1962059	1964828	1962059	1964828	-	transcript635.chr16.nnic@NA	transcript635.chr16.nnic	NA	1962059	1964828	Gene ID= novel_gene_chr16_636 TPM= 8.5 Transcript Type= NA
chr16	1964959	1965509	1964959	1965509	+	ENST00000531523.1@SNHG9	ENST00000531523.1	lincRNA	1964959,1965406	1965129,1965509	Gene ID= ENSG00000255198.4 TPM= 23.37 Transcript Type= lincRNA
chr16	1965034	1965504	1965034	1965504	+	ENST00000564014.1@SNHG9	ENST00000564014.1	lincRNA	1965034	1965504	Gene ID= ENSG00000255198.4 TPM= 1.06 Transcript Type= lincRNA
chr16	1984213	1987749	1984213	1987749	+	ENST00000248114.6@GFER	ENST00000248114.6	protein_coding	1984213,1984747,1985866	1984476,1984943,1987749	Gene ID= ENSG00000127554.12 TPM= 6.37 Transcript Type= protein_coding
chr16	1989945	1994275	1989945	1994275	+	ENST00000248121.6@SYNGR3	ENST00000248121.6	protein_coding	1989945,1991974,1992636,1992863	1990201,1992211,1992778,1994275	Gene ID= ENSG00000127561.14 TPM= 3.19 Transcript Type= protein_coding
chr16	1997654	2009823	1997654	2009823	-	ENST00000563630.5@ZNF598	ENST00000563630.5	protein_coding	2009524,2003616,2002991,2002521,2002206,2001583,2001004,2000391,1999496,1998965,1998702,1997654	2009823,2003728,2003120,2002732,2002423,2001700,2001191,2000481,2000256,1999121,1998852,1998585	Gene ID= ENSG00000167962.13 TPM= 14.87 Transcript Type= protein_coding
chr16	2007936	2009310	2007936	2009310	-	transcript656.chr16.nnic@NA	transcript656.chr16.nnic	NA	2007936	2009310	Gene ID= novel_gene_chr16_657 TPM= 2.12 Transcript Type= NA
chr16	2019545	2020755	2019545	2020755	+	ENST00000566435.1@NPW	ENST00000566435.1	protein_coding	2019545,2020533	2020312,2020755	Gene ID= ENSG00000183971.6 TPM= 1.06 Transcript Type= protein_coding
chr16	2026868	2039026	2026868	2039026	+	ENST00000424542.6@SLC9A3R2	ENST00000424542.6	protein_coding	2026868,2029582,2036324,2036728,2036955,2037538,2037826	2027218,2029782,2036503,2036881,2036998,2037600,2039026	Gene ID= ENSG00000065054.13 TPM= 66.92 Transcript Type= protein_coding
chr16	2033253	2038489	2033253	2038489	+	transcript685.chr16.nic@SLC9A3R2	transcript685.chr16.nic	protein_coding	2033253,2036324,2036728,2036955,2037538,2037859	2033432,2036503,2036881,2036998,2037600,2038489	Gene ID= ENSG00000065054.13 TPM= 7.7 Transcript Type= NA
chr16	2026928	2038489	2026928	2038489	+	ENST00000432365.6@SLC9A3R2	ENST00000432365.6	protein_coding	2026928,2029582,2036324,2036728,2036955,2037538,2037859	2027218,2029782,2036503,2036881,2036998,2037600,2038489	Gene ID= ENSG00000065054.13 TPM= 44.88 Transcript Type= protein_coding
chr16	2033271	2038421	2033271	2038421	+	ENST00000566198.1@SLC9A3R2	ENST00000566198.1	protein_coding	2033271,2036324,2036728,2036955,2037538,2037826	2033432,2036503,2036881,2036998,2037600,2038421	Gene ID= ENSG00000065054.13 TPM= 3.19 Transcript Type= protein_coding
chr16	2030619	2034748	2030619	2034748	-	transcript700.chr16.nnic@NA	transcript700.chr16.nnic	NA	2034420,2030619	2034748,2034346	Gene ID= novel_gene_chr16_701 TPM= 8.5 Transcript Type= NA
chr16	2035194	2038480	2035194	2038480	+	transcript703.chr16.nnic@NA	transcript703.chr16.nnic	NA	2035194	2038480	Gene ID= novel_gene_chr16_704 TPM= 3.19 Transcript Type= NA
chr16	2039815	2047866	2039815	2047866	-	ENST00000219066.5@NTHL1	ENST00000219066.5	protein_coding	2047709,2046128,2044630,2043567,2040133,2039815	2047866,2046366,2044800,2043726,2040238,2040047	Gene ID= ENSG00000065057.7 TPM= 22.31 Transcript Type= protein_coding
chr16	2047977	2065436	2047977	2065436	+	transcript661.chr16.nic@TSC2	transcript661.chr16.nic	protein_coding	2047977,2048587,2050400,2053342,2054296,2055402,2056196,2056644,2057105,2058747,2060670,2061871,2062497,2062972,2064272	2048065,2048753,2050486,2053452,2054440,2055519,2056244,2056769,2057178,2058873,2060813,2062008,2062600,2063053,2065436	Gene ID= ENSG00000103197.16 TPM= 2.12 Transcript Type= NA
chr16	2047989	2088702	2047989	2088702	+	ENST00000401874.6@TSC2	ENST00000401874.6	protein_coding	2047989,2048587,2050400,2053342,2054296,2055402,2056196,2056644,2057105,2058747,2060670,2061871,2062497,2062972,2064272,2065519,2070456,2071510,2071784,2072241,2072849,2074200,2075799,2076068,2076491,2079035,2079276,2079557,2080165,2081595,2083695,2084228,2084951,2085230,2086193,2086732,2087863,2088048,2088227,2088446	2048065,2048753,2050486,2053452,2054440,2055519,2056244,2056769,2057178,2058873,2060813,2062008,2062600,2063053,2064427,2065635,2070578,2071616,2071934,2072363,2072983,2074389,2075892,2076170,2076585,2079196,2079428,2079669,2080377,2081798,2083816,2084715,2085026,2085322,2086379,2086871,2087941,2088139,2088325,2088702	Gene ID= ENSG00000103197.16 TPM= 58.42 Transcript Type= protein_coding
chr16	2078085	2080227	2078085	2080227	-	transcript705.chr16.nnic@NA	transcript705.chr16.nnic	NA	2078085	2080227	Gene ID= novel_gene_chr16_706 TPM= 2.12 Transcript Type= NA
chr16	2148624	2154165	2148624	2154165	+	ENST00000210187.10@RAB26	ENST00000210187.10	protein_coding	2148624,2149941,2151569,2151695,2151856,2152820,2152989,2153146,2153319	2148978,2150051,2151610,2151761,2151908,2152885,2153045,2153222,2154165	Gene ID= ENSG00000167964.12 TPM= 2.12 Transcript Type= protein_coding
chr16	2148624	2154110	2148624	2154110	+	ENST00000562735.5@RAB26	ENST00000562735.5	protein_coding	2148624,2149941,2151569,2151695,2151856,2152820,2152989,2153319	2148978,2150051,2151610,2151761,2151908,2152885,2153222,2154110	Gene ID= ENSG00000167964.12 TPM= 2.12 Transcript Type= retained_intron
chr16	2154797	2155358	2154797	2155358	-	ENST00000563192.1@SNHG19	ENST00000563192.1	lincRNA	2155143,2154797	2155358,2154922	Gene ID= ENSG00000260260.1 TPM= 7.44 Transcript Type= lincRNA
chr16	2155765	2178129	2155765	2178129	+	ENST00000326181.10@TRAF7	ENST00000326181.10	protein_coding	2155765,2163883,2165879,2168077,2170614,2171264,2171572,2172191,2172465,2173182,2173481,2173788,2173921,2174251,2175111,2175301,2175500,2175834,2176049,2176265,2176560	2155858,2164001,2165936,2168168,2170730,2171356,2171605,2172374,2172599,2173399,2173554,2173836,2174048,2174333,2175150,2175417,2175622,2175953,2176180,2176384,2178129	Gene ID= ENSG00000131653.12 TPM= 14.87 Transcript Type= protein_coding
chr16	2205214	2209412	2205214	2209412	+	ENST00000569417.5@MLST8	ENST00000569417.5	protein_coding	2205214,2206031,2206358,2206497,2207035,2207193,2208210,2208450,2208759	2205512,2206214,2206409,2206659,2207110,2207345,2208334,2208613,2209412	Gene ID= ENSG00000167965.17 TPM= 34.3 Transcript Type= protein_coding
chr16	2205177	2209396	2205177	2209396	+	ENST00000564088.5@MLST8	ENST00000564088.5	protein_coding	2205177,2206061,2206358,2206497,2207035,2207193,2208210,2208450,2208759	2205512,2206214,2206409,2206659,2207110,2207345,2208334,2208613,2209396	Gene ID= ENSG00000167965.17 TPM= 15.18 Transcript Type= protein_coding
chr16	2205445	2209397	2205445	2209397	+	transcript730.chr16.nic@MLST8	transcript730.chr16.nic	protein_coding	2205445,2206031,2206358,2206497,2207035,2207193,2208450,2208759	2205512,2206214,2206409,2206659,2207110,2207345,2208613,2209397	Gene ID= ENSG00000167965.17 TPM= 4.56 Transcript Type= NA
chr16	2205708	2209397	2205708	2209397	+	transcript735.chr16.nic@MLST8	transcript735.chr16.nic	protein_coding	2205708,2206031,2206358,2206497,2207035,2207193,2208450,2208759	2205875,2206214,2206409,2206659,2207110,2207345,2208613,2209397	Gene ID= ENSG00000167965.17 TPM= 2.43 Transcript Type= NA
chr16	2205471	2209397	2205471	2209397	+	ENST00000568194.5@MLST8	ENST00000568194.5	protein_coding	2205471,2206358,2206497,2207035,2207193,2208210,2208450,2208759	2206214,2206409,2206659,2207110,2207345,2208334,2208613,2209397	Gene ID= ENSG00000167965.17 TPM= 6.68 Transcript Type= retained_intron
chr16	2205731	2209416	2205731	2209416	+	ENST00000566835.5@MLST8	ENST00000566835.5	protein_coding	2205731,2206061,2206358,2206497,2207035,2207193,2208450,2208759	2205875,2206214,2206409,2206659,2207110,2207345,2208613,2209416	Gene ID= ENSG00000167965.17 TPM= 4.56 Transcript Type= nonsense_mediated_decay
chr16	2205741	2209397	2205741	2209397	+	ENST00000397124.5@MLST8	ENST00000397124.5	protein_coding	2205741,2206031,2206358,2206497,2207035,2207193,2208210,2208450,2208759	2205875,2206214,2206409,2206659,2207110,2207345,2208334,2208613,2209397	Gene ID= ENSG00000167965.17 TPM= 13.05 Transcript Type= protein_coding
chr16	2209253	2214849	2209253	2214849	-	transcript741.chr16.nic@BRICD5	transcript741.chr16.nic	protein_coding	2214138,2210783,2210522,2210126,2209950,2209553,2209253	2214849,2214053,2210650,2210281,2210051,2209706,2209456	Gene ID= ENSG00000182685.7 TPM= 6.9 Transcript Type= NA
chr16	2211997	2214807	2211997	2214807	-	ENST00000333503.7@PGP	ENST00000333503.7	protein_coding	2214138,2211997	2214807,2214053	Gene ID= ENSG00000184207.8 TPM= 23.37 Transcript Type= protein_coding
chr16	2223566	2235742	2223566	2235742	+	ENST00000301727.8@E4F1	ENST00000301727.8	protein_coding	2223566,2228372,2229570,2232171,2232456,2232756,2233011,2233438,2233882,2234171,2234583,2234859,2235081,2235216	2223770,2228523,2229675,2232364,2232576,2232908,2233183,2233647,2233990,2234388,2234781,2235001,2235143,2235742	Gene ID= ENSG00000167967.15 TPM= 37.18 Transcript Type= protein_coding
chr16	2236467	2238711	2236467	2238711	+	ENST00000320700.9@DNASE1L2	ENST00000320700.9	protein_coding	2236467,2236778,2237038,2237218,2237376,2237767,2238362	2236560,2236960,2237126,2237301,2237649,2238018,2238711	Gene ID= ENSG00000167968.12 TPM= 1.06 Transcript Type= protein_coding
chr16	2239895	2251572	2239895	2251572	-	ENST00000562238.5@ECI1	ENST00000562238.5	protein_coding	2251515,2251316,2246859,2244406,2243369,2243046,2239895	2251572,2251429,2246986,2244552,2243439,2243224,2240145	Gene ID= ENSG00000167969.12 TPM= 4.25 Transcript Type= protein_coding
chr16	2253116	2267848	2253116	2267848	-	ENST00000397086.6@RNPS1	ENST00000397086.6	protein_coding	2267663,2264573,2264176,2263096,2262740,2262278,2255585,2253116	2267848,2264760,2264331,2263287,2262842,2262431,2255726,2254063	Gene ID= ENSG00000205937.11 TPM= 12.96 Transcript Type= protein_coding
chr16	2253116	2268412	2253116	2268412	-	ENST00000320225.9@RNPS1	ENST00000320225.9	protein_coding	2268055,2264573,2264176,2263096,2262740,2262278,2255585,2253116	2268412,2264760,2264331,2263287,2262842,2262431,2255726,2254063	Gene ID= ENSG00000205937.11 TPM= 103.24 Transcript Type= protein_coding
chr16	2253117	2268397	2253117	2268397	-	ENST00000566458.5@RNPS1	ENST00000566458.5	protein_coding	2268055,2264176,2263096,2262740,2262278,2255585,2253117	2268397,2264331,2263287,2262842,2262431,2255726,2254063	Gene ID= ENSG00000205937.11 TPM= 45.53 Transcript Type= protein_coding
chr16	2265488	2268096	2265488	2268096	-	transcript785.chr16.nnic@NA	transcript785.chr16.nnic	NA	2265488	2268096	Gene ID= novel_gene_chr16_786 TPM= 4.25 Transcript Type= NA
chr16	2323339	2340754	2323339	2340754	-	transcript787.chr16.nic@ABCA3	transcript787.chr16.nic	protein_coding	2340573,2329648,2328453,2326413,2326010,2324404,2323339	2340754,2329854,2328757,2326492,2326274,2324531,2323688	Gene ID= ENSG00000167972.13 TPM= 3.19 Transcript Type= NA
chr16	2340971	2362666	2340971	2362666	+	ENST00000482286.5@ABCA17P	ENST00000482286.5	transcribed_unitary_pseudogene	2340971,2361116,2361455	2341373,2361200,2362666	Gene ID= ENSG00000238098.9 TPM= 1.06 Transcript Type= retained_intron
chr16	2429394	2458854	2429394	2458854	+	ENST00000397066.8@CCNF	ENST00000397066.8	protein_coding	2429394,2431130,2432961,2435806,2437129,2438070,2439353,2439749,2443649,2445458,2448855,2449282,2449828,2453210,2453410,2455395,2456545	2429497,2431284,2433067,2435873,2437322,2438123,2439457,2439826,2443800,2445622,2448978,2449462,2449915,2453309,2453537,2455564,2458854	Gene ID= ENSG00000162063.12 TPM= 1.06 Transcript Type= protein_coding
chr16	2460145	2464963	2460145	2464963	+	ENST00000483320.5@C16orf59	ENST00000483320.5	protein_coding	2460145,2460623,2460816,2461747,2462149,2462415,2462631,2464039,2464522	2460381,2460693,2461224,2461800,2462239,2462526,2462732,2464229,2464963	Gene ID= ENSG00000162062.14 TPM= 1.06 Transcript Type= protein_coding
chr16	2475051	2505734	2475051	2505734	+	ENST00000567020.6@TBC1D24	ENST00000567020.6	protein_coding	2475051,2496034,2498238,2499357,2499835,2500268,2500804	2475170,2497113,2498396,2499420,2499930,2500490,2505734	Gene ID= ENSG00000162065.12 TPM= 4.25 Transcript Type= protein_coding
chr16	2475153	2503485	2475153	2503485	+	ENST00000293970.9@TBC1D24	ENST00000293970.9	protein_coding	2475153,2496034,2497710,2498238,2499357,2499835,2500268,2500804	2475170,2497113,2497727,2498396,2499420,2499930,2500490,2503485	Gene ID= ENSG00000162065.12 TPM= 1.06 Transcript Type= protein_coding
chr16	2513870	2520218	2513870	2520218	+	ENST00000330398.8@ATP6V0C	ENST00000330398.8	protein_coding	2513870,2519218,2519541	2514182,2519401,2520218	Gene ID= ENSG00000185883.11 TPM= 108.34 Transcript Type= protein_coding
chr16	2520359	2531422	2520359	2531422	+	transcript799.chr16.nic@AMDHD2	transcript799.chr16.nic	protein_coding	2520359,2520769,2520984,2527561,2527773,2528060,2528236,2528452,2528994,2529475	2520541,2520905,2521123,2527615,2527985,2528148,2528380,2528559,2529095,2531422	Gene ID= ENSG00000162066.14 TPM= 4.25 Transcript Type= NA
chr16	2520382	2531422	2520382	2531422	+	transcript802.chr16.nic@AMDHD2	transcript802.chr16.nic	protein_coding	2520382,2520984,2527561,2527773,2528060,2528236,2528452,2528650,2528994,2529475	2520541,2521123,2527615,2527985,2528148,2528380,2528559,2528718,2529095,2531422	Gene ID= ENSG00000162066.14 TPM= 4.25 Transcript Type= NA
chr16	2520365	2529698	2520365	2529698	+	ENST00000293971.10@AMDHD2	ENST00000293971.10	protein_coding	2520365,2520769,2520984,2527561,2527773,2528060,2528236,2528452,2528650,2528994,2529475	2520541,2520905,2521123,2527615,2527985,2528148,2528380,2528559,2528718,2529095,2529698	Gene ID= ENSG00000162066.14 TPM= 6.37 Transcript Type= protein_coding
chr16	2537964	2603188	2537964	2603188	+	ENST00000342085.8@PDPK1	ENST00000342085.8	protein_coding	2537964,2557703,2561480,2561771,2565553,2566356,2577425,2581295,2581607,2583412,2586676,2595793,2597123,2597651	2538136,2557963,2561522,2561908,2565697,2566453,2577500,2581363,2581703,2583585,2586893,2595850,2597275,2603188	Gene ID= ENSG00000140992.18 TPM= 121.09 Transcript Type= protein_coding
chr16	2554060	2556060	2554060	2556060	-	ENST00000563449.2@AC093525.6	ENST00000563449.2	antisense_RNA	2554060	2556060	Gene ID= ENSG00000261613.2 TPM= 1.06 Transcript Type= antisense_RNA
chr16	2603350	2630494	2603350	2630494	+	ENST00000399702.5@AC141586.1	ENST00000399702.5	transcribed_unprocessed_pseudogene	2603350,2610462,2613960,2628825	2603727,2611052,2614068,2630494	Gene ID= ENSG00000215154.6 TPM= 1.06 Transcript Type= processed_transcript
chr16	2661149	2673441	2661149	2673441	-	ENST00000568395.1@ERVK13-1	ENST00000568395.1	processed_transcript	2673283,2669411,2661149	2673441,2672570,2663407	Gene ID= ENSG00000260565.6 TPM= 3.19 Transcript Type= lincRNA
chr16	2682475	2709030	2682475	2709030	+	ENST00000301738.8@KCTD5	ENST00000301738.8	protein_coding	2682475,2695935,2697906,2699821,2702353,2707298	2682800,2696043,2697997,2699916,2702478,2709030	Gene ID= ENSG00000167977.8 TPM= 38.24 Transcript Type= protein_coding
chr16	2752329	2771412	2752329	2771412	+	ENST00000301740.12@SRRM2	ENST00000301740.12	protein_coding	2752329,2756334,2757472,2757781,2758470,2758985,2759140,2759352,2759569,2760301,2761561,2768997,2770352,2770604,2770858	2752846,2756606,2757579,2757945,2758547,2759047,2759172,2759402,2759661,2760499,2768261,2769284,2770465,2770717,2771412	Gene ID= ENSG00000167978.16 TPM= 113.65 Transcript Type= protein_coding
chr16	2752638	2761707	2752638	2761707	+	ENST00000575009.5@SRRM2	ENST00000575009.5	protein_coding	2752638,2757472,2757781,2758470,2758985,2759140,2759352,2759569,2760301,2761561	2752846,2757579,2757945,2758547,2759047,2759172,2759402,2759661,2760499,2761707	Gene ID= ENSG00000167978.16 TPM= 10.62 Transcript Type= protein_coding
chr16	2752714	2758524	2752714	2758524	+	ENST00000576415.5@SRRM2	ENST00000576415.5	protein_coding	2752714,2757472,2757781,2758470	2752846,2757579,2757945,2758524	Gene ID= ENSG00000167978.16 TPM= 10.62 Transcript Type= protein_coding
chr16	2769374	2771410	2769374	2771410	+	ENST00000574331.5@SRRM2	ENST00000574331.5	protein_coding	2769374,2770604,2770858	2770465,2770717,2771410	Gene ID= ENSG00000167978.16 TPM= 71.16 Transcript Type= retained_intron
chr16	2771415	2777195	2771415	2777195	-	ENST00000409477.1@ELOB	ENST00000409477.1	protein_coding	2776993,2775451,2771415	2777195,2775556,2772102	Gene ID= ENSG00000103363.14 TPM= 2.12 Transcript Type= protein_coding
chr16	2771414	2777277	2771414	2777277	-	ENST00000262306.11@ELOB	ENST00000262306.11	protein_coding	2777237,2776993,2775451,2771994,2771414	2777277,2777127,2775556,2772102,2771604	Gene ID= ENSG00000103363.14 TPM= 2.12 Transcript Type= protein_coding
chr16	2771414	2777297	2771414	2777297	-	ENST00000409906.8@ELOB	ENST00000409906.8	protein_coding	2777237,2776993,2775451,2771414	2777297,2777127,2775556,2772102	Gene ID= ENSG00000103363.14 TPM= 2.12 Transcript Type= protein_coding
chr16	2771943	2777272	2771943	2777272	-	ENST00000572954.1@ELOB	ENST00000572954.1	protein_coding	2777237,2776993,2771943	2777272,2777127,2772102	Gene ID= ENSG00000103363.14 TPM= 28.68 Transcript Type= protein_coding
chr16	2777319	2780568	2777319	2780568	+	ENST00000621230.1@AC092117.1	ENST00000621230.1	lincRNA	2777319	2780568	Gene ID= ENSG00000276791.1 TPM= 3.19 Transcript Type= lincRNA
chr16	2883165	2899382	2883165	2899382	+	transcript852.chr16.nic@FLYWCH2	transcript852.chr16.nic	protein_coding	2883165,2896352,2899049	2883366,2896771,2899382	Gene ID= ENSG00000162076.12 TPM= 4.25 Transcript Type= NA
chr16	2883186	2899382	2883186	2899382	+	ENST00000396958.7@FLYWCH2	ENST00000396958.7	protein_coding	2883186,2895220,2896352,2899049	2883366,2895320,2896771,2899382	Gene ID= ENSG00000162076.12 TPM= 29.74 Transcript Type= protein_coding
chr16	2903537	2905368	2903537	2905368	-	transcript853.chr16.nnic@NA	transcript853.chr16.nnic	NA	2903537	2905368	Gene ID= novel_gene_chr16_854 TPM= 2.12 Transcript Type= NA
chr16	2912008	2949813	2912008	2949813	+	transcript856.chr16.nic@FLYWCH1	transcript856.chr16.nic	protein_coding	2912008,2914176,2928824,2929613,2930410,2933130,2933716,2937121,2938184,2940032,2948688	2912154,2914289,2928917,2930010,2930880,2933582,2933979,2937384,2938456,2940092,2949813	Gene ID= ENSG00000059122.16 TPM= 23.55 Transcript Type= NA
chr16	2911988	2931330	2911988	2931330	+	transcript864.chr16.nic@FLYWCH1	transcript864.chr16.nic	protein_coding	2911988,2914176,2929613,2930410	2912154,2914289,2930010,2931330	Gene ID= ENSG00000059122.16 TPM= 3.19 Transcript Type= NA
chr16	2933149	2949809	2933149	2949809	+	ENST00000344592.9@FLYWCH1	ENST00000344592.9	protein_coding	2933149,2933716,2934615,2936332,2937121,2938184,2940032,2948688	2933582,2933979,2934667,2936425,2937384,2938456,2940092,2949809	Gene ID= ENSG00000059122.16 TPM= 5.49 Transcript Type= protein_coding
chr16	2936525	2949811	2936525	2949811	+	ENST00000574985.1@FLYWCH1	ENST00000574985.1	protein_coding	2936525,2938184,2940032,2948688	2937384,2938456,2940092,2949811	Gene ID= ENSG00000059122.16 TPM= 19.83 Transcript Type= retained_intron
chr16	2969268	2973484	2969268	2973484	+	transcript867.chr16.nnic@PAQR4	transcript867.chr16.nnic	protein_coding	2969268,2971157,2971515,2971886	2969840,2971378,2971684,2973484	Gene ID= ENSG00000162073.13 TPM= 12.03 Transcript Type= NA
chr16	2969245	2973489	2969245	2973489	+	ENST00000318782.8@PAQR4	ENST00000318782.8	protein_coding	2969245,2971157,2971515	2969840,2971378,2973489	Gene ID= ENSG00000162073.13 TPM= 34.34 Transcript Type= protein_coding
chr16	2969270	2973482	2969270	2973482	+	ENST00000293978.12@PAQR4	ENST00000293978.12	protein_coding	2969270,2971274,2971515	2969840,2971378,2973482	Gene ID= ENSG00000162073.13 TPM= 14.16 Transcript Type= protein_coding
chr16	2969325	2973482	2969325	2973482	+	transcript881.chr16.nnic@NA	transcript881.chr16.nnic	NA	2969325	2973482	Gene ID= novel_gene_chr16_882 TPM= 4.25 Transcript Type= NA
chr16	3004181	3006631	3004181	3006631	+	transcript872.chr16.nnic@AC004233.3	transcript872.chr16.nnic	lincRNA	3004181,3006220,3006419	3004879,3006234,3006631	Gene ID= ENSG00000272079.2 TPM= 2.47 Transcript Type= NA
chr16	3004181	3006399	3004181	3006399	+	transcript877.chr16.nnic@AC004233.3	transcript877.chr16.nnic	lincRNA	3004181,3006220	3004879,3006399	Gene ID= ENSG00000272079.2 TPM= 2.47 Transcript Type= NA
chr16	3004181	3006753	3004181	3006753	+	transcript878.chr16.nnic@AC004233.3	transcript878.chr16.nnic	lincRNA	3004181,3006220	3004879,3006753	Gene ID= ENSG00000272079.2 TPM= 2.47 Transcript Type= NA
chr16	3004181	3007384	3004181	3007384	+	transcript880.chr16.nnic@AC004233.3	transcript880.chr16.nnic	lincRNA	3004181,3006220	3004879,3007384	Gene ID= ENSG00000272079.2 TPM= 12.75 Transcript Type= NA
chr16	3006120	3007388	3006120	3007388	+	ENST00000607794.2@AC004233.3	ENST00000607794.2	lincRNA	3006120	3007388	Gene ID= ENSG00000272079.2 TPM= 1.06 Transcript Type= lincRNA
chr16	3020312	3022383	3020312	3022383	+	ENST00000326577.8@TNFRSF12A	ENST00000326577.8	protein_coding	3020312,3021215,3021555,3021771	3020491,3021319,3021689,3022383	Gene ID= ENSG00000006327.13 TPM= 537.8 Transcript Type= protein_coding
chr16	3020359	3022383	3020359	3022383	+	ENST00000341627.5@TNFRSF12A	ENST00000341627.5	protein_coding	3020359,3021555,3021771	3020491,3021689,3022383	Gene ID= ENSG00000006327.13 TPM= 39.65 Transcript Type= protein_coding
chr16	3020390	3022383	3020390	3022383	+	ENST00000571351.1@TNFRSF12A	ENST00000571351.1	protein_coding	3020390,3021555,3021771	3021319,3021689,3022383	Gene ID= ENSG00000006327.13 TPM= 9.91 Transcript Type= retained_intron
chr16	3022620	3024246	3022620	3024246	-	ENST00000248089.7@HCFC1R1	ENST00000248089.7	protein_coding	3023847,3023474,3023233,3022620	3024246,3023530,3023361,3022998	Gene ID= ENSG00000103145.10 TPM= 21.24 Transcript Type= protein_coding
chr16	3022625	3023961	3022625	3023961	-	ENST00000574151.5@HCFC1R1	ENST00000574151.5	protein_coding	3023847,3023233,3022625	3023961,3023361,3022998	Gene ID= ENSG00000103145.10 TPM= 18.06 Transcript Type= protein_coding
chr16	3024041	3027755	3024041	3027755	+	ENST00000574549.5@THOC6	ENST00000574549.5	protein_coding	3024041,3024193,3025712,3025924,3026063,3026251,3026365,3026516,3026679,3026867,3027011,3027170,3027366,3027577	3024086,3024365,3025823,3025988,3026166,3026288,3026413,3026587,3026781,3026916,3027073,3027280,3027500,3027755	Gene ID= ENSG00000131652.13 TPM= 3.19 Transcript Type= protein_coding
chr16	3024939	3025881	3024939	3025881	-	transcript904.chr16.nnic@NA	transcript904.chr16.nnic	NA	3024939	3025881	Gene ID= novel_gene_chr16_905 TPM= 10.62 Transcript Type= NA
chr16	3057859	3059360	3057859	3059360	-	transcript923.chr16.nnic@NA	transcript923.chr16.nnic	NA	3057859	3059360	Gene ID= novel_gene_chr16_924 TPM= 3.19 Transcript Type= NA
chr16	3065404	3069552	3065404	3069552	+	ENST00000528163.6@IL32	ENST00000528163.6	protein_coding	3065404,3065621,3065784,3067377,3067554,3067984,3068180,3068990	3065494,3065687,3065826,3067415,3067613,3068010,3068239,3069552	Gene ID= ENSG00000008517.16 TPM= 2.12 Transcript Type= protein_coding
chr16	3065297	3069667	3065297	3069667	+	ENST00000325568.9@IL32	ENST00000325568.9	protein_coding	3065297,3065784,3067377,3067554,3067984,3068180,3068990	3065494,3065826,3067415,3067613,3068010,3068239,3069667	Gene ID= ENSG00000008517.16 TPM= 3.19 Transcript Type= protein_coding
chr16	3065384	3069728	3065384	3069728	+	ENST00000525643.6@IL32	ENST00000525643.6	protein_coding	3065384,3065784,3067377,3067554,3067984,3068180,3068990	3065687,3065826,3067415,3067613,3068010,3068239,3069728	Gene ID= ENSG00000008517.16 TPM= 1.06 Transcript Type= protein_coding
chr16	3065614	3069532	3065614	3069532	+	ENST00000533097.6@IL32	ENST00000533097.6	protein_coding	3065614,3065784,3067377,3067554,3067984,3068180,3068990	3065655,3065826,3067415,3067613,3068010,3068239,3069532	Gene ID= ENSG00000008517.16 TPM= 1.06 Transcript Type= protein_coding
chr16	3065312	3069551	3065312	3069551	+	ENST00000534507.5@IL32	ENST00000534507.5	protein_coding	3065312,3065784,3067377,3067984,3068180,3068990	3065494,3065826,3067613,3068010,3068239,3069551	Gene ID= ENSG00000008517.16 TPM= 1.06 Transcript Type= protein_coding
chr16	3065369	3069543	3065369	3069543	+	ENST00000526464.6@IL32	ENST00000526464.6	protein_coding	3065369,3067377,3067554,3067984,3068180,3068990	3065826,3067415,3067613,3068010,3068239,3069543	Gene ID= ENSG00000008517.16 TPM= 1.06 Transcript Type= protein_coding
chr16	3065369	3069551	3065369	3069551	+	ENST00000440815.7@IL32	ENST00000440815.7	protein_coding	3065369,3065781,3067377,3067554,3067984,3068180,3068990	3065494,3065826,3067415,3067613,3068010,3068239,3069551	Gene ID= ENSG00000008517.16 TPM= 6.37 Transcript Type= protein_coding
chr16	3065322	3069547	3065322	3069547	+	ENST00000396887.7@IL32	ENST00000396887.7	protein_coding	3065322,3065784,3067377,3067554,3067984,3068180,3068990,3069281	3065494,3065826,3067415,3067613,3068010,3068239,3069109,3069547	Gene ID= ENSG00000008517.16 TPM= 1.06 Transcript Type= protein_coding
chr16	3130210	3133731	3130210	3133731	-	transcript932.chr16.nic@ZNF213-AS1	transcript932.chr16.nic	antisense_RNA	3132850,3130210	3133731,3132103	Gene ID= ENSG00000263072.6 TPM= 2.66 Transcript Type= NA
chr16	3112573	3120483	3112573	3120483	+	ENST00000219091.8@ZNF205	ENST00000219091.8	protein_coding	3112573,3113417,3115355,3115829,3116427,3118905,3119256	3112682,3113487,3115568,3115920,3116547,3119015,3120483	Gene ID= ENSG00000122386.10 TPM= 2.12 Transcript Type= protein_coding
chr16	3112560	3120517	3112560	3120517	+	ENST00000382192.7@ZNF205	ENST00000382192.7	protein_coding	3112560,3113349,3115355,3115829,3116427,3118905,3119256	3112682,3113487,3115568,3115920,3116547,3119015,3120517	Gene ID= ENSG00000122386.10 TPM= 10.62 Transcript Type= protein_coding
chr16	3131079	3133729	3131079	3133729	+	transcript933.chr16.nnic@NA	transcript933.chr16.nnic	NA	3131079	3133729	Gene ID= novel_gene_chr16_934 TPM= 4.78 Transcript Type= NA
chr16	3222345	3235167	3222345	3235167	-	ENST00000431561.7@ZNF200	ENST00000431561.7	protein_coding	3234636,3233506,3232833,3232421,3222345	3235167,3233836,3232921,3232547,3224613	Gene ID= ENSG00000010539.11 TPM= 2.66 Transcript Type= protein_coding
chr16	3222325	3235456	3222325	3235456	-	ENST00000414144.6@ZNF200	ENST00000414144.6	protein_coding	3234987,3233506,3232833,3232421,3222325	3235456,3233836,3232921,3232547,3224613	Gene ID= ENSG00000010539.11 TPM= 1.59 Transcript Type= protein_coding
chr16	3282943	3291460	3282943	3291460	+	ENST00000219069.5@ZNF263	ENST00000219069.5	protein_coding	3282943,3285059,3285681,3286023,3288454,3289393	3284205,3285239,3285754,3286149,3288570,3291460	Gene ID= ENSG00000006194.9 TPM= 7.44 Transcript Type= protein_coding
chr16	3305491	3320003	3305491	3320003	+	transcript955.chr16.nic@ZNF75A	transcript955.chr16.nic	protein_coding	3305491,3308313,3311753,3312677,3313049,3316912,3317190	3305643,3308836,3311948,3312768,3313175,3317022,3320003	Gene ID= ENSG00000162086.14 TPM= 4.25 Transcript Type= NA
chr16	3305406	3318574	3305406	3318574	+	ENST00000498240.6@ZNF75A	ENST00000498240.6	protein_coding	3305406,3308313,3311753,3312677,3316912,3317190	3305643,3308836,3311948,3312768,3317022,3318574	Gene ID= ENSG00000162086.14 TPM= 3.72 Transcript Type= processed_transcript
chr16	3305491	3312365	3305491	3312365	+	transcript960.chr16.nic@ZNF75A	transcript960.chr16.nic	protein_coding	3305491,3308313,3311753	3305643,3308836,3312365	Gene ID= ENSG00000162086.14 TPM= 2.12 Transcript Type= NA
chr16	3305491	3309482	3305491	3309482	+	transcript964.chr16.nic@ZNF75A	transcript964.chr16.nic	protein_coding	3305491,3308313	3305643,3309482	Gene ID= ENSG00000162086.14 TPM= 6.37 Transcript Type= NA
chr16	3305484	3309472	3305484	3309472	+	ENST00000575234.1@ZNF75A	ENST00000575234.1	protein_coding	3305484	3309472	Gene ID= ENSG00000162086.14 TPM= 2.12 Transcript Type= retained_intron
chr16	3382081	3401065	3382081	3401065	-	ENST00000618425.4@ZSCAN32	ENST00000618425.4	protein_coding	3400945,3397192,3384459,3382081	3401065,3397744,3384941,3383711	Gene ID= ENSG00000140987.19 TPM= 1.06 Transcript Type= protein_coding
chr16	3401244	3405079	3401244	3405079	+	ENST00000344823.9@ZNF174	ENST00000344823.9	protein_coding	3401244,3404426,3404909	3402406,3404648,3405079	Gene ID= ENSG00000103343.12 TPM= 7.44 Transcript Type= protein_coding
chr16	3432422	3443542	3432422	3443542	-	ENST00000301744.5@ZNF597	ENST00000301744.5	protein_coding	3443360,3443121,3440807,3432422	3443542,3443206,3440933,3437538	Gene ID= ENSG00000167981.5 TPM= 1.06 Transcript Type= protein_coding
chr16	3443611	3486963	3443611	3486963	+	ENST00000407558.8@NAA60	ENST00000407558.8	protein_coding	3443611,3448471,3476222,3479471,3482502,3483363,3484699,3485467	3443837,3448540,3476337,3479600,3482598,3483597,3485061,3486963	Gene ID= ENSG00000122390.17 TPM= 18.77 Transcript Type= protein_coding
chr16	3458006	3486951	3458006	3486951	+	transcript991.chr16.nic@NAA60	transcript991.chr16.nic	protein_coding	3458006,3476222,3479471,3482502,3483363,3484699	3458181,3476337,3479600,3482598,3483597,3486951	Gene ID= ENSG00000122390.17 TPM= 16.64 Transcript Type= NA
chr16	3458006	3480611	3458006	3480611	+	transcript993.chr16.nic@NAA60	transcript993.chr16.nic	protein_coding	3458006,3476222,3479471	3458181,3476337,3480611	Gene ID= ENSG00000122390.17 TPM= 2.12 Transcript Type= NA
chr16	3458012	3486952	3458012	3486952	+	ENST00000414063.6@NAA60	ENST00000414063.6	protein_coding	3458012,3476222,3479471,3482502,3483363,3484699,3485467	3458181,3476337,3479600,3482598,3483597,3485083,3486952	Gene ID= ENSG00000122390.17 TPM= 13.46 Transcript Type= protein_coding
chr16	3500924	3539048	3500924	3539048	+	ENST00000576634.5@CLUAP1	ENST00000576634.5	protein_coding	3500924,3504720,3506331,3508289,3512383,3515508,3519903,3523158,3526412,3530568,3532786,3536122	3501089,3504831,3506415,3508468,3512478,3515591,3520036,3523299,3526484,3530675,3532841,3539048	Gene ID= ENSG00000103351.12 TPM= 2.12 Transcript Type= protein_coding
chr16	3658037	3717597	3658037	3717597	-	ENST00000246957.9@TRAP1	ENST00000246957.9	protein_coding	3717421,3690827,3689055,3685996,3679719,3677498,3676036,3675324,3674339,3672700,3671722,3665971,3664274,3663424,3662882,3661987,3658793,3658037	3717597,3690985,3689137,3686136,3679790,3677658,3676145,3675397,3674494,3672820,3671791,3666118,3664459,3663562,3662967,3662132,3658865,3658230	Gene ID= ENSG00000126602.10 TPM= 287.85 Transcript Type= protein_coding
chr16	3716425	3717526	3716425	3717526	-	transcript1027.chr16.nnic@NA	transcript1027.chr16.nnic	NA	3716425	3717526	Gene ID= novel_gene_chr16_1028 TPM= 4.25 Transcript Type= NA
chr16	3725054	3880726	3725054	3880726	-	ENST00000262367.9@CREBBP	ENST00000262367.9	protein_coding	3879832,3850297,3810603,3793386,3791981,3782684,3781204,3780732,3778700,3778011,3777613,3774569,3773751,3770570,3769174,3767720,3758854,3757809,3757288,3751726,3749627,3745277,3744894,3740399,3739578,3738559,3736650,3736036,3731776,3731192,3725054	3880726,3851009,3810779,3793626,3792094,3782926,3781306,3780878,3778817,3778182,3777657,3774693,3773930,3770986,3769353,3767909,3758972,3758048,3757376,3751806,3749683,3745354,3744961,3740549,3739724,3738672,3736815,3736203,3731937,3731473,3729874	Gene ID= ENSG00000005339.14 TPM= 45.67 Transcript Type= protein_coding
chr16	3849526	3880728	3849526	3880728	-	transcript1036.chr16.nic@CREBBP	transcript1036.chr16.nic	protein_coding	3879832,3849526	3880728,3851009	Gene ID= ENSG00000005339.14 TPM= 15.93 Transcript Type= NA
chr16	3947609	3950444	3947609	3950444	-	ENST00000576810.1@AC005736.1	ENST00000576810.1	sense_overlapping	3950272,3947609	3950444,3948829	Gene ID= ENSG00000262185.1 TPM= 1.06 Transcript Type= sense_overlapping
chr16	4003024	4116525	4003024	4116525	-	transcript1041.chr16.nnic@ADCY9	transcript1041.chr16.nnic	protein_coding	4115690,4113750,4007368,4003024	4116525,4115485,4007558,4003507	Gene ID= ENSG00000162104.9 TPM= 9.56 Transcript Type= NA
chr16	4189374	4242079	4189374	4242079	-	transcript1049.chr16.nnic@SRL	transcript1049.chr16.nnic	protein_coding	4242007,4206953,4204533,4203166,4197799,4195553,4189374	4242079,4208104,4204634,4203261,4197915,4195786,4192964	Gene ID= ENSG00000185739.13 TPM= 91.87 Transcript Type= NA
chr16	4189374	4242082	4189374	4242082	-	transcript1051.chr16.nnic@SRL	transcript1051.chr16.nnic	protein_coding	4242007,4213706,4204533,4203166,4197799,4195553,4189374	4242082,4213835,4204634,4203261,4197915,4195786,4192964	Gene ID= ENSG00000185739.13 TPM= 86.56 Transcript Type= NA
chr16	4189374	4242080	4189374	4242080	-	ENST00000399609.7@SRL	ENST00000399609.7	protein_coding	4242007,4204533,4203166,4197799,4195553,4189374	4242080,4204634,4203261,4197915,4195786,4192964	Gene ID= ENSG00000185739.13 TPM= 654.81 Transcript Type= protein_coding
chr16	4238625	4242077	4238625	4242077	-	transcript1077.chr16.nnic@NA	transcript1077.chr16.nnic	NA	4238625	4242077	Gene ID= novel_gene_chr16_1078 TPM= 5.31 Transcript Type= NA
chr16	4257186	4273075	4257186	4273075	-	ENST00000204517.10@TFAP4	ENST00000204517.10	protein_coding	4272658,4262536,4262324,4261779,4260455,4260090,4257186	4273075,4262701,4262422,4261949,4260595,4260245,4258249	Gene ID= ENSG00000090447.11 TPM= 2.12 Transcript Type= protein_coding
chr16	4340251	4351326	4340251	4351326	-	transcript1091.chr16.nnic@PAM16	transcript1091.chr16.nnic	protein_coding	4351232,4343483,4343207,4341368,4340920,4340251	4351326,4343594,4343291,4341504,4340985,4340405	Gene ID= ENSG00000217930.7 TPM= 5.31 Transcript Type= NA
chr16	4340248	4351372	4340248	4351372	-	ENST00000318059.7@PAM16	ENST00000318059.7	protein_coding	4351232,4343207,4341368,4340920,4340248	4351372,4343291,4341504,4340985,4340405	Gene ID= ENSG00000217930.7 TPM= 37.18 Transcript Type= protein_coding
chr16	4340251	4351270	4340251	4351270	-	ENST00000573614.5@PAM16	ENST00000573614.5	protein_coding	4351232,4343207,4341368,4340920,4340251	4351270,4343291,4341672,4340985,4340405	Gene ID= ENSG00000217930.7 TPM= 2.12 Transcript Type= processed_transcript
chr16	4334240	4336822	4334240	4336822	-	transcript1100.chr16.nnic@NA	transcript1100.chr16.nnic	NA	4334240	4336822	Gene ID= novel_gene_chr16_1101 TPM= 4.25 Transcript Type= NA
chr16	4354542	4416664	4354542	4416664	-	ENST00000251166.8@CORO7	ENST00000251166.8	protein_coding	4416459,4413308,4412356,4408181,4407501,4405491,4395289,4388545,4387986,4365491,4365003,4364775,4364597,4364276,4362612,4361985,4361361,4361162,4360943,4360444,4360278,4359480,4359296,4358367,4357968,4357168,4355286,4354542	4416664,4413404,4412430,4408251,4407684,4405567,4395339,4388631,4388068,4365545,4365060,4364920,4364689,4364413,4362738,4362160,4361469,4361248,4361085,4360548,4360363,4359621,4359385,4358483,4358103,4357259,4355372,4355163	Gene ID= ENSG00000262246.5 TPM= 4.25 Transcript Type= protein_coding
chr16	4371848	4383528	4371848	4383528	+	ENST00000304735.3@VASN	ENST00000304735.3	protein_coding	4371848,4380869	4371993,4383528	Gene ID= ENSG00000168140.4 TPM= 33.99 Transcript Type= protein_coding
chr16	4425805	4456775	4425805	4456775	+	ENST00000262375.10@DNAJA3	ENST00000262375.10	protein_coding	4425805,4434384,4437402,4441375,4442268,4443017,4444664,4446886,4448733,4450400,4454811,4455546	4426092,4434517,4437485,4441575,4442420,4443164,4444728,4447014,4448848,4450497,4454927,4456775	Gene ID= ENSG00000103423.13 TPM= 55.76 Transcript Type= protein_coding
chr16	4425860	4456775	4425860	4456775	+	ENST00000355296.8@DNAJA3	ENST00000355296.8	protein_coding	4425860,4434384,4437402,4441375,4442268,4443017,4444664,4446886,4448733,4450400,4455546	4426092,4434517,4437485,4441575,4442420,4443164,4444728,4447014,4448848,4450497,4456775	Gene ID= ENSG00000103423.13 TPM= 105.68 Transcript Type= protein_coding
chr16	4461694	4474622	4461694	4474622	-	ENST00000404295.7@NMRAL1	ENST00000404295.7	protein_coding	4474410,4474093,4469227,4466153,4463660,4461694	4474622,4474166,4469465,4466402,4463850,4461959	Gene ID= ENSG00000153406.13 TPM= 3.72 Transcript Type= protein_coding
chr16	4461695	4474643	4461695	4474643	-	ENST00000574425.5@NMRAL1	ENST00000574425.5	protein_coding	4474423,4474093,4469227,4466153,4463660,4461695	4474643,4474166,4469465,4466402,4463850,4461959	Gene ID= ENSG00000153406.13 TPM= 2.66 Transcript Type= protein_coding
chr16	4461680	4474895	4461680	4474895	-	ENST00000283429.10@NMRAL1	ENST00000283429.10	protein_coding	4474554,4474093,4469227,4466153,4463660,4461680	4474895,4474166,4469465,4466402,4463850,4461959	Gene ID= ENSG00000153406.13 TPM= 9.03 Transcript Type= protein_coding
chr16	4461691	4476306	4461691	4476306	-	ENST00000574733.5@NMRAL1	ENST00000574733.5	protein_coding	4476237,4474093,4469227,4466153,4463660,4461691	4476306,4474792,4469465,4466402,4463850,4461959	Gene ID= ENSG00000153406.13 TPM= 1.59 Transcript Type= protein_coding
chr16	4463743	4476297	4463743	4476297	-	ENST00000571291.5@NMRAL1	ENST00000571291.5	protein_coding	4476237,4474554,4474093,4469504,4466153,4463743	4476297,4474792,4474166,4469698,4466402,4463850	Gene ID= ENSG00000153406.13 TPM= 1.06 Transcript Type= nonsense_mediated_decay
chr16	4476340	4510295	4476340	4510295	+	ENST00000458134.7@HMOX2	ENST00000458134.7	protein_coding	4476340,4483637,4505484,4506895,4507713,4509412,4509629	4476487,4483754,4505610,4507012,4508204,4509538,4510295	Gene ID= ENSG00000103415.11 TPM= 1.06 Transcript Type= protein_coding
chr16	4475924	4510347	4475924	4510347	+	ENST00000570646.5@HMOX2	ENST00000570646.5	protein_coding	4475924,4505484,4506895,4507713,4509412,4509629	4476487,4505610,4507012,4508204,4509538,4510347	Gene ID= ENSG00000103415.11 TPM= 138.61 Transcript Type= protein_coding
chr16	4476340	4510346	4476340	4510346	+	ENST00000619913.4@HMOX2	ENST00000619913.4	protein_coding	4476340,4505484,4506895,4507713,4509412,4509629	4476665,4505610,4507012,4508204,4509538,4510346	Gene ID= ENSG00000103415.11 TPM= 3.19 Transcript Type= protein_coding
chr16	4510675	4538470	4510675	4538470	-	ENST00000563332.6@CDIP1	ENST00000563332.6	protein_coding	4538325,4514575,4514046,4513696,4512791,4510675	4538470,4514664,4514144,4513851,4513064,4512683	Gene ID= ENSG00000089486.16 TPM= 23.9 Transcript Type= protein_coding
chr16	4511324	4538784	4511324	4538784	-	ENST00000567695.5@CDIP1	ENST00000567695.5	protein_coding	4538702,4514575,4514046,4513696,4512791,4511324	4538784,4514664,4514144,4513851,4513064,4512683	Gene ID= ENSG00000089486.16 TPM= 48.33 Transcript Type= protein_coding
chr16	4608883	4614926	4608883	4614926	-	ENST00000283474.11@UBALD1	ENST00000283474.11	protein_coding	4614678,4610493,4608883	4614926,4610555,4609983	Gene ID= ENSG00000153443.12 TPM= 25.49 Transcript Type= protein_coding
chr16	4624790	4690974	4624790	4690974	+	ENST00000262370.11@MGRN1	ENST00000262370.11	protein_coding	4624790,4650365,4651963,4652678,4657246,4664709,4665102,4668265,4671391,4673498,4677463,4680032,4681550,4682823,4683224,4683843,4688796	4625048,4650483,4652051,4652824,4657363,4664775,4665151,4668312,4671459,4673657,4677572,4680097,4681776,4682946,4683269,4683932,4690974	Gene ID= ENSG00000102858.12 TPM= 24.43 Transcript Type= protein_coding
chr16	4665669	4668537	4665669	4668537	-	transcript1163.chr16.nnic@NA	transcript1163.chr16.nnic	NA	4665669	4668537	Gene ID= novel_gene_chr16_1164 TPM= 11.68 Transcript Type= NA
chr16	4693718	4695828	4693718	4695828	+	transcript1166.chr16.nnic@NUDT16L1	transcript1166.chr16.nnic	protein_coding	4693718,4693978,4694958	4693879,4694298,4695828	Gene ID= ENSG00000168101.14 TPM= 2.12 Transcript Type= NA
chr16	4693707	4695859	4693707	4695859	+	ENST00000586536.1@NUDT16L1	ENST00000586536.1	protein_coding	4693707,4693978,4694958	4693879,4694308,4695859	Gene ID= ENSG00000168101.14 TPM= 13.81 Transcript Type= protein_coding
chr16	4696510	4734265	4696510	4734265	-	transcript1171.chr16.nic@ANKS3	transcript1171.chr16.nic	protein_coding	4734156,4729980,4726659,4724750,4714051,4705095,4702102,4701434,4700970,4699052,4698800,4698427,4697977,4697333,4697017,4696510	4734265,4730151,4726780,4724831,4714186,4705253,4702242,4701543,4701134,4699176,4698941,4698599,4698062,4697416,4697104,4696896	Gene ID= ENSG00000168096.14 TPM= 12.75 Transcript Type= NA
chr16	4748239	4767218	4748239	4767218	-	ENST00000219478.10@ZNF500	ENST00000219478.10	protein_coding	4767017,4765565,4762573,4762271,4760492,4748239	4767218,4766076,4762756,4762335,4760588,4753058	Gene ID= ENSG00000103199.13 TPM= 2.12 Transcript Type= protein_coding
chr16	4796968	4802950	4796968	4802950	-	ENST00000322048.11@ROGDI	ENST00000322048.11	protein_coding	4802527,4802382,4801503,4801267,4800498,4799686,4798569,4798071,4797938,4797714,4796968	4802950,4802453,4801585,4801321,4800578,4799781,4798667,4798184,4797987,4797840,4797501	Gene ID= ENSG00000067836.12 TPM= 129.56 Transcript Type= protein_coding
chr16	4796968	4802936	4796968	4802936	-	transcript1203.chr16.nnic@ROGDI	transcript1203.chr16.nnic	protein_coding	4802527,4802382,4801503,4801267,4800498,4799686,4798569,4798071,4797938,4797714,4796968	4802936,4802453,4801585,4801321,4800578,4799781,4798667,4798184,4797987,4797861,4797501	Gene ID= ENSG00000067836.12 TPM= 19.81 Transcript Type= NA
chr16	4796969	4802633	4796969	4802633	-	ENST00000587843.5@ROGDI	ENST00000587843.5	protein_coding	4802527,4802382,4801503,4800498,4799686,4798569,4798071,4797938,4797714,4796969	4802633,4802453,4801585,4800578,4799781,4798667,4798184,4797987,4797840,4797501	Gene ID= ENSG00000067836.12 TPM= 16.18 Transcript Type= nonsense_mediated_decay
chr16	4803203	4847290	4803203	4847290	-	transcript1188.chr16.nic@GLYR1	transcript1188.chr16.nic	protein_coding	4847228,4846174,4845074,4832774,4831979,4823821,4822875,4821547,4821380,4817598,4814537,4813737,4812086,4811623,4811170,4804522,4803203	4847290,4846210,4845153,4832912,4832221,4823907,4822931,4821597,4821453,4817697,4814629,4813838,4812248,4811802,4811294,4805310,4804148	Gene ID= ENSG00000140632.16 TPM= 7.65 Transcript Type= NA
chr16	4803203	4847342	4803203	4847342	-	ENST00000321919.13@GLYR1	ENST00000321919.13	protein_coding	4847228,4846174,4845074,4832774,4831979,4823821,4822875,4821547,4821380,4817598,4814537,4813737,4812086,4811623,4811170,4803203	4847342,4846210,4845153,4832912,4832221,4823907,4822931,4821597,4821453,4817697,4814647,4813838,4812248,4811802,4811294,4805310	Gene ID= ENSG00000140632.16 TPM= 24.11 Transcript Type= protein_coding
chr16	4820498	4847290	4820498	4847290	-	transcript1213.chr16.nic@GLYR1	transcript1213.chr16.nic	protein_coding	4847228,4846174,4845074,4832774,4831979,4823821,4822875,4821547,4820498	4847290,4846210,4845153,4832912,4832221,4823907,4822931,4821597,4821453	Gene ID= ENSG00000140632.16 TPM= 2.12 Transcript Type= NA
chr16	4803203	4847271	4803203	4847271	-	ENST00000588732.5@GLYR1	ENST00000588732.5	protein_coding	4847228,4846174,4845074,4843404,4832774,4831979,4823821,4822875,4821547,4821380,4817598,4814537,4813737,4812086,4811623,4811170,4804522,4803203	4847271,4846210,4845153,4843602,4832912,4832221,4823907,4822931,4821597,4821453,4817697,4814647,4813838,4812248,4811802,4811294,4805310,4804148	Gene ID= ENSG00000140632.16 TPM= 9.77 Transcript Type= nonsense_mediated_decay
chr16	4803203	4847279	4803203	4847279	-	ENST00000436648.9@GLYR1	ENST00000436648.9	protein_coding	4847228,4846174,4845074,4832774,4823821,4822875,4821547,4821380,4817598,4814537,4813737,4812086,4811623,4811170,4803203	4847279,4846210,4845153,4832912,4823907,4822931,4821597,4821453,4817697,4814647,4813838,4812248,4811802,4811294,4805310	Gene ID= ENSG00000140632.16 TPM= 14.55 Transcript Type= protein_coding
chr16	4847442	4859899	4847442	4859899	+	transcript1227.chr16.nic@UBN1	transcript1227.chr16.nic	protein_coding	4847442,4852879,4857990,4858568,4859025,4859865	4848210,4853166,4858076,4858663,4859159,4859899	Gene ID= ENSG00000118900.14 TPM= 5.31 Transcript Type= NA
chr16	4846665	4859129	4846665	4859129	+	ENST00000592120.5@UBN1	ENST00000592120.5	protein_coding	4846665,4852879,4857990,4858568,4859025	4848393,4853166,4858076,4858663,4859129	Gene ID= ENSG00000118900.14 TPM= 1.06 Transcript Type= protein_coding
chr16	4879447	4885293	4879447	4885293	-	transcript1236.chr16.nnic@NA	transcript1236.chr16.nnic	NA	4879447	4885293	Gene ID= novel_gene_chr16_1237 TPM= 11.68 Transcript Type= NA
chr16	4882507	4937135	4882507	4937135	-	ENST00000345988.6@PPL	ENST00000345988.6	protein_coding	4936984,4910850,4903886,4902406,4900964,4900830,4899223,4899013,4897675,4895594,4895261,4894467,4893541,4893213,4892035,4891811,4890728,4890184,4888978,4888102,4887135,4882507	4937135,4910949,4904040,4902526,4901089,4900871,4899384,4899120,4897770,4895716,4895407,4894618,4893638,4893370,4892213,4891949,4890921,4890334,4889061,4888218,4887227,4886047	Gene ID= ENSG00000118898.15 TPM= 13.81 Transcript Type= protein_coding
chr16	4958317	5019158	4958317	5019158	+	ENST00000251170.11@SEC14L5	ENST00000251170.11	protein_coding	4958317,4959273,4987557,4988149,4990767,4991838,4996348,4996855,5000655,5000855,5003402,5005914,5007352,5008421,5011095,5014859	4958445,4959386,4987706,4988280,4990895,4992030,4996460,4997044,5000743,5000925,5003573,5006048,5007486,5008648,5011273,5019158	Gene ID= ENSG00000103184.11 TPM= 1.06 Transcript Type= protein_coding
chr16	5024844	5033934	5024844	5033934	-	ENST00000312251.7@NAGPA	ENST00000312251.7	protein_coding	5033829,5033273,5031745,5030385,5028880,5027980,5027846,5027278,5027135,5024844	5033934,5033728,5031884,5030493,5029008,5028185,5027893,5027379,5027198,5025685	Gene ID= ENSG00000103174.11 TPM= 11.68 Transcript Type= protein_coding
chr16	5033702	5043999	5033702	5043999	+	ENST00000632058.1@NAGPA-AS1	ENST00000632058.1	lincRNA	5033702,5042095	5034061,5043999	Gene ID= ENSG00000267072.2 TPM= 1.06 Transcript Type= lincRNA
chr16	5071819	5085587	5071819	5085587	+	ENST00000262374.9@ALG1	ENST00000262374.9	protein_coding	5071819,5072951,5073153,5075388,5077445,5077907,5078757,5079064,5079748,5080946,5082559,5083682,5084750	5072057,5073028,5073256,5075536,5077534,5078017,5078878,5079102,5079807,5081056,5082673,5083757,5085587	Gene ID= ENSG00000033011.11 TPM= 4.25 Transcript Type= protein_coding
chr16	5084304	5097754	5084304	5097754	-	transcript1256.chr16.nic@EEF2KMT	transcript1256.chr16.nic	protein_coding	5097280,5095452,5093484,5091794,5090432,5090084,5089107,5084304	5097754,5095514,5093564,5091895,5090565,5090349,5089256,5085732	Gene ID= ENSG00000118894.14 TPM= 3.9 Transcript Type= NA
chr16	5084304	5097808	5084304	5097808	-	ENST00000427587.8@EEF2KMT	ENST00000427587.8	protein_coding	5097644,5095452,5093484,5091794,5090432,5090084,5089107,5084304	5097808,5095514,5093564,5091895,5090565,5090349,5089256,5085732	Gene ID= ENSG00000118894.14 TPM= 8.15 Transcript Type= protein_coding
chr16	5084304	5097788	5084304	5097788	-	ENST00000458008.8@EEF2KMT	ENST00000458008.8	protein_coding	5097644,5095452,5093484,5090432,5090084,5089107,5084304	5097788,5095514,5093564,5090565,5090349,5089256,5085732	Gene ID= ENSG00000118894.14 TPM= 8.15 Transcript Type= protein_coding
chr16	7332796	7710844	7332796	7710844	+	transcript1275.chr16.nic@RBFOX1	transcript1275.chr16.nic	protein_coding	7332796,7518147,7579777,7587247,7597371,7607285,7630603,7653815,7671557,7676774,7709056,7710623	7333088,7518389,7579920,7587300,7597431,7607338,7630683,7653947,7671599,7676838,7709131,7710844	Gene ID= ENSG00000078328.20 TPM= 2.12 Transcript Type= NA
chr16	8621688	8649654	8621688	8649654	+	ENST00000381920.7@METTL22	ENST00000381920.7	protein_coding	8621688,8625496,8628730,8635039,8635168,8639091,8641131,8642127,8642463,8644557,8646108	8621775,8625798,8629110,8635079,8635312,8639162,8641184,8642207,8642565,8644725,8649654	Gene ID= ENSG00000067365.14 TPM= 6.9 Transcript Type= protein_coding
chr16	8621691	8646224	8621691	8646224	+	ENST00000163678.11@METTL22	ENST00000163678.11	protein_coding	8621691,8625496,8628730,8635168,8639091,8641131,8642127,8642463,8644557,8646108	8621775,8625798,8629110,8635312,8639162,8641184,8642207,8642565,8644725,8646224	Gene ID= ENSG00000067365.14 TPM= 9.03 Transcript Type= nonsense_mediated_decay
chr16	8674565	8784575	8674565	8784575	+	ENST00000268251.12@ABAT	ENST00000268251.12	protein_coding	8674565,8735699,8746001,8748108,8750422,8757757,8764069,8764738,8766208,8768193,8768825,8772780,8774890,8776344,8779479,8781309	8674711,8735809,8746098,8748137,8750539,8757806,8764149,8764830,8766270,8768256,8768973,8772917,8775057,8776490,8779590,8784575	Gene ID= ENSG00000183044.11 TPM= 33.99 Transcript Type= protein_coding
chr16	8795180	8797648	8795180	8797648	-	ENST00000333050.6@TMEM186	ENST00000333050.6	protein_coding	8797612,8795180	8797648,8796590	Gene ID= ENSG00000184857.7 TPM= 2.12 Transcript Type= protein_coding
chr16	8797817	8849331	8797817	8849331	+	ENST00000268261.8@PMM2	ENST00000268261.8	protein_coding	8797817,8801799,8804767,8806316,8811079,8811638,8812991,8847724	8797948,8801910,8804843,8806407,8811178,8811713,8813106,8849331	Gene ID= ENSG00000140650.11 TPM= 29.74 Transcript Type= protein_coding
chr16	8807165	8810310	8807165	8810310	-	transcript1304.chr16.nnic@NA	transcript1304.chr16.nnic	NA	8807165	8810310	Gene ID= novel_gene_chr16_1305 TPM= 5.31 Transcript Type= NA
chr16	8854913	8869009	8854913	8869009	-	ENST00000311052.9@CARHSP1	ENST00000311052.9	protein_coding	8868966,8859171,8858350,8854913	8869009,8859335,8858472,8855326	Gene ID= ENSG00000153048.10 TPM= 23.37 Transcript Type= protein_coding
chr16	8857448	8861510	8857448	8861510	-	transcript1306.chr16.nnic@NA	transcript1306.chr16.nnic	NA	8857448	8861510	Gene ID= novel_gene_chr16_1307 TPM= 10.62 Transcript Type= NA
chr16	8915256	8963984	8915256	8963984	-	transcript1326.chr16.nic@USP7	transcript1326.chr16.nic	protein_coding	8963207,8930293,8923215,8921157,8920359,8919031,8917026,8916502,8915445,8915256	8963984,8930397,8923413,8921295,8920447,8919139,8917156,8916556,8915525,8915344	Gene ID= ENSG00000187555.14 TPM= 14.87 Transcript Type= NA
chr16	9091023	9091325	9091023	9091325	-	transcript1330.chr16.nnic@NA	transcript1330.chr16.nnic	NA	9091023	9091325	Gene ID= novel_gene_chr16_1331 TPM= 2.12 Transcript Type= NA
chr16	9106436	9112100	9106436	9112100	+	transcript1342.chr16.nnic@NA	transcript1342.chr16.nnic	NA	9106436	9112100	Gene ID= novel_gene_chr16_1343 TPM= 10.62 Transcript Type= NA
chr16	9762675	9970795	9762675	9970795	-	ENST00000461292.3@GRIN2A	ENST00000461292.3	protein_coding	9970743,9937959,9890986,9849756,9840936,9840647,9834105,9829423,9822264,9798277,9768851,9763772,9762675	9970795,9938551,9891100,9849961,9841104,9840800,9834230,9829652,9822424,9798464,9769089,9764948,9763428	Gene ID= ENSG00000183454.16 TPM= 1.06 Transcript Type= processed_transcript
chr16	10386055	10483638	10386055	10483638	+	ENST00000396560.6@ATF7IP2	ENST00000396560.6	protein_coding	10386055,10428868,10430611,10433525,10438101,10440364,10457372,10472110,10473479,10473923,10480879,10481836	10386122,10429016,10431455,10433649,10438235,10440462,10457529,10472183,10473534,10473989,10480964,10483638	Gene ID= ENSG00000166669.13 TPM= 3.19 Transcript Type= protein_coding
chr16	10386058	10387741	10386058	10387741	+	ENST00000566316.5@ATF7IP2	ENST00000566316.5	protein_coding	10386058,10387144,10387378	10386122,10387290,10387741	Gene ID= ENSG00000166669.13 TPM= 13.81 Transcript Type= retained_intron
chr16	10386232	10387737	10386232	10387737	+	transcript1349.chr16.nnic@ATF7IP2	transcript1349.chr16.nnic	protein_coding	10386232,10387144,10387378	10386451,10387290,10387737	Gene ID= ENSG00000166669.13 TPM= 3.19 Transcript Type= NA
chr16	10386061	10387741	10386061	10387741	+	ENST00000562396.1@ATF7IP2	ENST00000562396.1	protein_coding	10386061	10387741	Gene ID= ENSG00000166669.13 TPM= 4.25 Transcript Type= retained_intron
chr16	10532741	10559383	10532741	10559383	-	transcript1354.chr16.nnic@EMP2	transcript1354.chr16.nnic	protein_coding	10558994,10547909,10547540,10543570,10537928,10532741	10559383,10548030,10547677,10543660,10538074,10533092	Gene ID= ENSG00000213853.9 TPM= 6.37 Transcript Type= NA
chr16	10557793	10559416	10557793	10559416	-	transcript1364.chr16.nnic@NA	transcript1364.chr16.nnic	NA	10557793	10559416	Gene ID= novel_gene_chr16_1365 TPM= 3.19 Transcript Type= NA
chr16	10743820	10769351	10743820	10769351	+	transcript1367.chr16.nic@NUBP1	transcript1367.chr16.nic	protein_coding	10743820,10743961,10747143,10752610,10755721,10756690,10757873,10761364,10761757,10769047	10743882,10744065,10747276,10752678,10755753,10756780,10758027,10761474,10761859,10769351	Gene ID= ENSG00000103274.10 TPM= 7.97 Transcript Type= NA
chr16	10743845	10769351	10743845	10769351	+	ENST00000283027.9@NUBP1	ENST00000283027.9	protein_coding	10743845,10743961,10747143,10752610,10755721,10756690,10757873,10761364,10761757,10767949,10769047	10743882,10744065,10747276,10752678,10755753,10756780,10758027,10761474,10761859,10768032,10769351	Gene ID= ENSG00000103274.10 TPM= 45.14 Transcript Type= protein_coding
chr16	10928891	10942476	10928891	10942476	-	transcript1371.chr16.nnic@DEXI	transcript1371.chr16.nnic	protein_coding	10941569,10933900,10928891	10942476,10934004,10929559	Gene ID= ENSG00000182108.9 TPM= 5.31 Transcript Type= NA
chr16	10928891	10942460	10928891	10942460	-	ENST00000331808.4@DEXI	ENST00000331808.4	protein_coding	10941569,10928891	10942460,10929559	Gene ID= ENSG00000182108.9 TPM= 155.08 Transcript Type= protein_coding
chr16	10940719	10943021	10940719	10943021	+	ENST00000573379.1@AC133065.2	ENST00000573379.1	antisense_RNA	10940719,10941186	10941029,10943021	Gene ID= ENSG00000262222.1 TPM= 2.12 Transcript Type= antisense_RNA
chr16	10944563	11003989	10944563	11003989	+	transcript1377.chr16.nic@CLEC16A	transcript1377.chr16.nic	protein_coding	10944563,10957782,10962455,10969161,10971125,10972938,10977225,10979329,10982878,11003074	10944797,10957910,10962588,10969309,10971230,10973061,10977399,10979382,10982991,11003989	Gene ID= ENSG00000038532.14 TPM= 4.25 Transcript Type= NA
chr16	11005967	11007722	11005967	11007722	-	transcript1378.chr16.nnic@NA	transcript1378.chr16.nnic	NA	11005967	11007722	Gene ID= novel_gene_chr16_1379 TPM= 2.12 Transcript Type= NA
chr16	11068988	11070934	11068988	11070934	-	transcript1380.chr16.nnic@NA	transcript1380.chr16.nnic	NA	11068988	11070934	Gene ID= novel_gene_chr16_1381 TPM= 4.25 Transcript Type= NA
chr16	11254405	11256179	11254405	11256179	-	ENST00000332029.2@SOCS1	ENST00000332029.2	protein_coding	11256079,11254405	11256179,11255528	Gene ID= ENSG00000185338.4 TPM= 6.37 Transcript Type= protein_coding
chr16	11345431	11351762	11345431	11351762	+	ENST00000312499.5@RMI2	ENST00000312499.5	protein_coding	11345431,11350642	11345766,11351762	Gene ID= ENSG00000175643.8 TPM= 1.06 Transcript Type= protein_coding
chr16	11547726	11586950	11547726	11586950	-	ENST00000622633.4@LITAF	ENST00000622633.4	protein_coding	11586886,11556511,11553533,11547726	11586950,11556735,11553689,11549745	Gene ID= ENSG00000189067.12 TPM= 1.06 Transcript Type= protein_coding
chr16	11547722	11587563	11547722	11587563	-	ENST00000571688.5@LITAF	ENST00000571688.5	protein_coding	11587338,11556511,11553533,11547722	11587563,11556735,11553689,11549745	Gene ID= ENSG00000189067.12 TPM= 1.06 Transcript Type= protein_coding
chr16	11548603	11556736	11548603	11556736	-	ENST00000381810.7@LITAF	ENST00000381810.7	protein_coding	11556511,11553533,11548603	11556736,11553689,11549746	Gene ID= ENSG00000189067.12 TPM= 8.5 Transcript Type= protein_coding
chr16	11668414	11679159	11668414	11679159	+	ENST00000329565.5@SNN	ENST00000329565.5	protein_coding	11668414,11675975	11668540,11679159	Gene ID= ENSG00000184602.5 TPM= 121.09 Transcript Type= protein_coding
chr16	11679083	11742860	11679083	11742860	-	transcript1393.chr16.nic@TXNDC11	transcript1393.chr16.nic	protein_coding	11742477,11736017,11733982,11721577,11700452,11698125,11691290,11688303,11687857,11684165,11679083	11742860,11736233,11734079,11721670,11700564,11698325,11692082,11688445,11687966,11684245,11679837	Gene ID= ENSG00000153066.12 TPM= 5.82 Transcript Type= NA
chr16	11679083	11742829	11679083	11742829	-	transcript1394.chr16.nic@TXNDC11	transcript1394.chr16.nic	protein_coding	11742477,11736017,11733982,11730645,11721577,11698125,11691290,11688303,11687857,11684165,11679083	11742829,11736233,11734079,11730774,11721670,11698325,11692082,11688445,11687966,11684245,11679837	Gene ID= ENSG00000153066.12 TPM= 10.07 Transcript Type= NA
chr16	11679083	11742866	11679083	11742866	-	transcript1395.chr16.nnic@TXNDC11	transcript1395.chr16.nnic	protein_coding	11742477,11736017,11733982,11730645,11721577,11700452,11698125,11688303,11687857,11684165,11679083	11742866,11736233,11734079,11730774,11721670,11700564,11698325,11688445,11687966,11684245,11679837	Gene ID= ENSG00000153066.12 TPM= 2.81 Transcript Type= NA
chr16	11679083	11742859	11679083	11742859	-	transcript1396.chr16.nic@TXNDC11	transcript1396.chr16.nic	protein_coding	11742477,11736017,11733982,11721577,11698125,11691290,11688303,11687857,11684165,11679083	11742859,11736233,11734079,11721670,11698325,11692082,11688445,11687966,11684245,11679837	Gene ID= ENSG00000153066.12 TPM= 6.88 Transcript Type= NA
chr16	11679080	11742878	11679080	11742878	-	ENST00000283033.9@TXNDC11	ENST00000283033.9	protein_coding	11742477,11736017,11733982,11730645,11721577,11700452,11698125,11691290,11688303,11687857,11684165,11679080	11742878,11736233,11734079,11730774,11721670,11700564,11698325,11692082,11688445,11687966,11684245,11679837	Gene ID= ENSG00000153066.12 TPM= 37.07 Transcript Type= protein_coding
chr16	11756322	11797238	11756322	11797238	-	transcript1421.chr16.nic@ZC3H7A	transcript1421.chr16.nic	protein_coding	11797124,11782287,11781425,11779166,11776751,11776452,11776320,11774980,11774236,11770783,11769031,11768315,11767417,11765489,11765053,11763478,11762671,11761910,11761406,11758431,11756322	11797238,11782388,11781464,11779363,11776909,11776532,11776358,11775013,11774519,11770987,11769095,11768501,11767578,11765685,11765153,11763659,11762747,11762043,11761511,11758539,11756370	Gene ID= ENSG00000122299.11 TPM= 5.31 Transcript Type= NA
chr16	11750586	11797267	11750586	11797267	-	ENST00000355758.8@ZC3H7A	ENST00000355758.8	protein_coding	11797124,11782287,11781425,11779166,11776751,11776452,11776320,11774980,11774236,11770783,11769031,11768315,11767417,11765489,11765053,11763478,11762671,11761910,11761406,11758431,11756237,11752669,11750586	11797267,11782388,11781464,11779363,11776909,11776532,11776358,11775013,11774519,11770987,11769095,11768501,11767578,11765685,11765153,11763659,11762747,11762043,11761511,11758539,11756370,11752832,11751506	Gene ID= ENSG00000122299.11 TPM= 36.11 Transcript Type= protein_coding
chr16	11797468	11798275	11797468	11798275	+	ENST00000615722.1@AC010654.1	ENST00000615722.1	lincRNA	11797468	11798275	Gene ID= ENSG00000277369.1 TPM= 1.06 Transcript Type= lincRNA
chr16	11833850	11851585	11833850	11851585	-	ENST00000571133.5@RSL1D1	ENST00000571133.5	protein_coding	11851408,11850279,11847668,11846695,11846501,11841907,11841695,11839695,11833850	11851585,11850418,11847806,11846843,11846602,11842000,11841820,11839985,11838113	Gene ID= ENSG00000171490.12 TPM= 7.44 Transcript Type= protein_coding
chr16	11841708	11851542	11841708	11851542	-	ENST00000570767.5@RSL1D1	ENST00000570767.5	protein_coding	11851404,11850279,11847668,11846695,11846501,11841907,11841708	11851542,11850413,11847806,11846843,11846602,11842000,11841820	Gene ID= ENSG00000171490.12 TPM= 9.56 Transcript Type= nonsense_mediated_decay
chr16	11891093	11916009	11891093	11916009	-	transcript1445.chr16.nic@GSPT1	transcript1445.chr16.nic	protein_coding	11915369,11897994,11897840,11896558,11894954,11891093	11916009,11898035,11897881,11896785,11894987,11891139	Gene ID= ENSG00000103342.12 TPM= 39.3 Transcript Type= NA
chr16	11872679	11915878	11872679	11915878	-	ENST00000439887.6@GSPT1	ENST00000439887.6	protein_coding	11915369,11897994,11897840,11896558,11894954,11891062,11887570,11886777,11886471,11885181,11883015,11877407,11876086,11875761,11872679	11915878,11898035,11897881,11896782,11894987,11891139,11887750,11886931,11886611,11885274,11883095,11877580,11876175,11875929,11873171	Gene ID= ENSG00000103342.12 TPM= 44.61 Transcript Type= protein_coding
chr16	11976699	12135737	11976699	12135737	+	transcript1446.chr16.nic@SNX29	transcript1446.chr16.nic	protein_coding	11976699,11999297,12002991,12027320,12042897,12046384,12048372,12051847,12061528,12069057,12078833,12126633,12129630,12135551	11976813,11999358,12003043,12027444,12043077,12046454,12048620,12052222,12061646,12069132,12078915,12126696,12129758,12135737	Gene ID= ENSG00000048471.13 TPM= 4.25 Transcript Type= NA
chr16	12659799	12804017	12659799	12804017	-	ENST00000381774.8@CPPED1	ENST00000381774.8	protein_coding	12803707,12781185,12704624,12659799	12804017,12781403,12705049,12665115	Gene ID= ENSG00000103381.11 TPM= 1.06 Transcript Type= protein_coding
chr16	13920155	13949412	13920155	13949412	+	transcript1462.chr16.nnic@ERCC4	transcript1462.chr16.nnic	protein_coding	13920155,13922031,13926561,13928028,13930710,13932157,13934192,13935146,13937766,13944723,13947614,13948713	13920372,13922211,13926756,13928235,13930890,13932285,13934302,13935743,13937858,13944835,13948315,13949412	Gene ID= ENSG00000175595.14 TPM= 2.12 Transcript Type= NA
chr16	14186717	14241425	14186717	14241425	+	ENST00000572567.5@MKL2	ENST00000572567.5	protein_coding	14186717,14210243,14212354,14213545,14217126,14218820,14234146,14240237	14187035,14210308,14212409,14213620,14217287,14218998,14234283,14241425	Gene ID= ENSG00000186260.16 TPM= 1.06 Transcript Type= protein_coding
chr16	14302245	14328939	14302245	14328939	+	ENST00000570945.2@MIR193BHG	ENST00000570945.2	lincRNA	14302245,14326013	14302536,14328939	Gene ID= ENSG00000262454.3 TPM= 2.12 Transcript Type= lincRNA
chr16	14302246	14303239	14302246	14303239	+	transcript1481.chr16.nnic@NA	transcript1481.chr16.nnic	NA	14302246	14303239	Gene ID= novel_gene_chr16_1482 TPM= 2.12 Transcript Type= NA
chr16	14435701	14630272	14435701	14630272	-	transcript1486.chr16.nnic@PARN	transcript1486.chr16.nnic	protein_coding	14630107,14629597,14628172,14627269,14627106,14617590,14610644,14609058,14608281,14606484,14604146,14599904,14593301,14586318,14584749,14584347,14582181,14580874,14555654,14552021,14482638,14446888,14435701	14630272,14629674,14628251,14627336,14627187,14617650,14610809,14609123,14608319,14606526,14604226,14599960,14593378,14586361,14584791,14584422,14582291,14580943,14555709,14552095,14482827,14447081,14436772	Gene ID= ENSG00000140694.16 TPM= 3.19 Transcript Type= NA
chr16	14436605	14630276	14436605	14630276	-	ENST00000341484.11@PARN	ENST00000341484.11	protein_coding	14630190,14629597,14628172,14627269,14627106,14617590,14610644,14609058,14608281,14606484,14604146,14599904,14593301,14586318,14584749,14584347,14582181,14580874,14555654,14554065,14552021,14482638,14446888,14436605	14630276,14629674,14628251,14627336,14627187,14617650,14610809,14609123,14608319,14606526,14604226,14599960,14593378,14586361,14584791,14584422,14582291,14580943,14555709,14554151,14552095,14482827,14447081,14436772	Gene ID= ENSG00000140694.16 TPM= 2.12 Transcript Type= protein_coding
chr16	14435701	14630267	14435701	14630267	-	ENST00000437198.6@PARN	ENST00000437198.6	protein_coding	14630107,14629597,14628172,14627269,14627106,14617590,14610644,14609058,14608281,14606484,14604146,14599904,14593301,14586318,14584749,14584347,14582181,14580874,14555654,14554065,14552021,14482638,14446888,14435701	14630267,14629674,14628251,14627336,14627187,14617650,14610809,14609123,14608319,14606526,14604226,14599960,14593378,14586361,14584791,14584422,14582291,14580943,14555709,14554151,14552095,14482827,14447081,14436772	Gene ID= ENSG00000140694.16 TPM= 27.62 Transcript Type= protein_coding
chr16	14632932	14650589	14632932	14650589	+	ENST00000562442.5@BFAR	ENST00000562442.5	protein_coding	14632932,14644274,14648388,14649804	14633018,14644609,14648592,14650589	Gene ID= ENSG00000103429.10 TPM= 3.19 Transcript Type= protein_coding
chr16	14833681	14896160	14833681	14896160	+	ENST00000287667.11@NOMO1	ENST00000287667.11	protein_coding	14833681,14838407,14841362,14844674,14846577,14848899,14852430,14853467,14853937,14857217,14857505,14863013,14864585,14865024,14866555,14868548,14871621,14872234,14875036,14875340,14876359,14876664,14878721,14880015,14881544,14882594,14884372,14886761,14889096,14894998,14895514	14834016,14838496,14841407,14844774,14846683,14848971,14852582,14853604,14854026,14857322,14857655,14863187,14864726,14865155,14866691,14868635,14871684,14872329,14875254,14875422,14876518,14876790,14878834,14880142,14881685,14882677,14884482,14886862,14889215,14895090,14896160	Gene ID= ENSG00000103512.14 TPM= 163.57 Transcript Type= protein_coding
chr16	14833721	14872649	14833721	14872649	+	transcript1513.chr16.nnic@NOMO1	transcript1513.chr16.nnic	protein_coding	14833721,14838407,14841362,14844674,14846577,14848899,14852430,14853467,14853937,14857217,14857505,14863013,14864585,14865024,14866555,14868548,14871621,14872234,14872473	14834016,14838496,14841407,14844774,14846683,14848971,14852582,14853604,14854026,14857322,14857655,14863187,14864726,14865155,14866691,14868635,14871684,14872329,14872649	Gene ID= ENSG00000103512.14 TPM= 6.37 Transcript Type= NA
chr16	14935768	14952060	14935768	14952060	+	transcript1521.chr16.nic@NPIPA1	transcript1521.chr16.nic	protein_coding	14935768,14941812,14945574,14945837,14948930,14950050,14950220	14937650,14941940,14945673,14945981,14949037,14950110,14952060	Gene ID= ENSG00000183426.16 TPM= 15.93 Transcript Type= NA
chr16	14975114	15037685	14975114	15037685	+	transcript1525.chr16.nnic@PDXDC1	transcript1525.chr16.nnic	protein_coding	14975114,14997753,14998340,15001776,15004187,15006394,15008779,15009681,15016129,15017120,15017321,15018840,15022704,15026643,15028878,15029951,15031735,15032861,15033278,15034286,15034457,15035449,15036016,15037140	14975220,14997826,14998405,15001856,15004333,15006583,15008847,15009759,15016213,15017168,15017422,15018965,15022754,15026706,15028966,15030056,15031906,15032979,15033399,15034378,15034553,15035553,15036248,15037685	Gene ID= ENSG00000179889.18 TPM= 7.25 Transcript Type= NA
chr16	14975098	15032653	14975098	15032653	+	transcript1537.chr16.nic@PDXDC1	transcript1537.chr16.nic	protein_coding	14975098,14997753,14998340,15001776,15004187,15006394,15008779,15009681,15016129,15017120,15017321,15018840,15022704,15026643,15028878,15029951,15031735	14975220,14997826,14998405,15001856,15004333,15006583,15008847,15009759,15016213,15017168,15017422,15018965,15022754,15026706,15028966,15030056,15032653	Gene ID= ENSG00000179889.18 TPM= 4.07 Transcript Type= NA
chr16	14975012	15139339	14975012	15139339	+	ENST00000535621.6@PDXDC1	ENST00000535621.6	protein_coding	14975012,14997753,14998340,15001776,15004187,15006394,15008779,15009681,15016129,15017120,15017321,15018840,15022704,15026643,15028878,15029951,15138879	14975220,14997826,14998405,15001856,15004333,15006583,15008847,15009759,15016213,15017168,15017422,15018965,15022754,15026706,15028966,15030056,15139339	Gene ID= ENSG00000179889.18 TPM= 3.54 Transcript Type= protein_coding
chr16	14974981	14977966	14974981	14977966	+	transcript1557.chr16.nnic@PDXDC1	transcript1557.chr16.nnic	protein_coding	14974981,14976200,14977303	14975220,14976305,14977966	Gene ID= ENSG00000179889.18 TPM= 2.12 Transcript Type= NA
chr16	15028504	15151453	15028504	15151453	+	transcript1559.chr16.nnic@PDXDC1	transcript1559.chr16.nnic	protein_coding	15028504,15138817,15150199	15030406,15139950,15151453	Gene ID= ENSG00000179889.18 TPM= 83.91 Transcript Type= NA
chr16	15037854	15056079	15037854	15056079	-	ENST00000624579.3@NTAN1	ENST00000624579.3	protein_coding	15055891,15047855,15047442,15044334,15041623,15041068,15039969,15038574,15037854	15056079,15047920,15047550,15044407,15041676,15041121,15040066,15038687,15038210	Gene ID= ENSG00000157045.8 TPM= 10.8 Transcript Type= protein_coding
chr16	15037853	15056064	15037853	15056064	-	ENST00000287706.7@NTAN1	ENST00000287706.7	protein_coding	15055891,15047997,15047855,15047442,15044334,15041623,15041068,15039969,15038574,15037853	15056064,15048099,15047920,15047550,15044407,15041676,15041121,15040066,15038687,15038210	Gene ID= ENSG00000157045.8 TPM= 31.51 Transcript Type= protein_coding
chr16	15037854	15056079	15037854	15056079	-	ENST00000622833.4@NTAN1	ENST00000622833.4	protein_coding	15055891,15047442,15044334,15041623,15041068,15039969,15038574,15037854	15056079,15047550,15044407,15041676,15041121,15040066,15038687,15038210	Gene ID= ENSG00000157045.8 TPM= 22.49 Transcript Type= protein_coding
chr16	15060022	15094317	15060022	15094317	-	ENST00000198767.10@RRN3	ENST00000198767.10	protein_coding	15094145,15092509,15091315,15086365,15086129,15085639,15084642,15083513,15079998,15076558,15074723,15072950,15071121,15070070,15068169,15065219,15063196,15060022	15094317,15092614,15091371,15086454,15086258,15085698,15084705,15083582,15080096,15076650,15074861,15073080,15071251,15070254,15068277,15065371,15063283,15061905	Gene ID= ENSG00000085721.12 TPM= 29.74 Transcript Type= protein_coding
chr16	15108652	15109700	15108652	15109700	+	transcript1563.chr16.nnic@NA	transcript1563.chr16.nnic	NA	15108652	15109700	Gene ID= novel_gene_chr16_1564 TPM= 3.19 Transcript Type= NA
chr16	15126659	15131499	15126659	15131499	-	ENST00000424133.2@PKD1P6	ENST00000424133.2	transcribed_unprocessed_pseudogene	15131074,15130635,15130202,15129882,15128222,15127992,15127687,15126659	15131499,15130791,15130454,15130077,15128389,15128135,15127897,15127596	Gene ID= ENSG00000250251.6 TPM= 7.44 Transcript Type= processed_transcript
chr16	15434295	15588259	15434295	15588259	+	ENST00000300006.8@C16orf45	ENST00000300006.8	protein_coding	15434295,15515305,15567983,15581217,15583156,15586717	15434759,15515428,15568056,15581331,15583238,15588259	Gene ID= ENSG00000166780.10 TPM= 159.32 Transcript Type= protein_coding
chr16	15444125	15445846	15444125	15445846	-	transcript1576.chr16.nnic@NA	transcript1576.chr16.nnic	NA	15444125	15445846	Gene ID= novel_gene_chr16_1577 TPM= 3.19 Transcript Type= NA
chr16	15587957	15589260	15587957	15589260	-	transcript1578.chr16.nnic@NA	transcript1578.chr16.nnic	NA	15587957	15589260	Gene ID= novel_gene_chr16_1579 TPM= 2.12 Transcript Type= NA
chr16	15703172	15857011	15703172	15857011	-	ENST00000396324.7@MYH11	ENST00000396324.7	protein_coding	15856941,15837908,15823255,15798660,15786630,15784698,15782385,15778780,15776078,15771569,15763796,15760540,15759576,15757827,15756341,15753394,15750138,15748047,15747874,15747570,15745129,15741760,15741463,15740051,15738565,15737449,15735366,15732564,15726848,15724888,15724647,15724161,15721422,15720839,15720151,15719585,15719220,15718315,15717140,15715164,15714909,15703172	15857011,15838269,15823411,15798687,15786732,15784718,15782477,15778843,15776176,15771712,15763891,15760658,15759728,15758000,15756514,15753508,15750331,15748168,15747943,15747730,15745237,15741891,15741669,15740188,15738688,15737620,15735578,15732708,15727054,15724992,15724799,15724409,15721634,15721051,15720312,15719713,15719308,15718438,15717348,15715272,15715081,15704123	Gene ID= ENSG00000133392.17 TPM= 31.51 Transcript Type= protein_coding
chr16	15703172	15857011	15703172	15857011	-	ENST00000452625.6@MYH11	ENST00000452625.6	protein_coding	15856941,15837908,15823255,15798660,15786630,15784698,15782385,15778780,15776078,15771569,15763796,15760540,15759576,15757827,15756341,15753394,15750138,15748047,15747874,15747570,15745129,15741760,15741463,15740051,15738565,15737449,15735366,15732564,15726848,15724888,15724647,15724161,15721422,15720839,15720151,15719585,15719220,15718315,15717140,15715164,15714909,15708803,15703172	15857011,15838269,15823411,15798687,15786732,15784718,15782477,15778843,15776176,15771712,15763891,15760658,15759728,15758000,15756514,15753508,15750331,15748168,15747943,15747730,15745237,15741891,15741669,15740188,15738688,15737620,15735578,15732708,15727054,15724992,15724799,15724409,15721634,15721051,15720312,15719713,15719308,15718438,15717348,15715272,15715081,15708841,15704123	Gene ID= ENSG00000133392.17 TPM= 15.58 Transcript Type= protein_coding
chr16	15703991	15857033	15703991	15857033	-	ENST00000300036.5@MYH11	ENST00000300036.5	protein_coding	15856941,15837908,15823255,15798660,15786630,15782385,15778780,15776078,15771569,15763796,15760540,15759576,15757827,15756341,15753394,15750138,15748047,15747874,15747570,15745129,15741760,15741463,15740051,15738565,15737449,15735366,15732564,15726848,15724888,15724647,15724161,15721422,15720839,15720151,15719585,15719220,15718315,15717140,15715164,15714909,15703991	15857033,15838269,15823411,15798687,15786732,15782477,15778843,15776176,15771712,15763891,15760658,15759728,15758000,15756514,15753508,15750331,15748168,15747943,15747730,15745237,15741891,15741669,15740188,15738688,15737620,15735578,15732708,15727054,15724992,15724799,15724409,15721634,15721051,15720312,15719713,15719308,15718438,15717348,15715272,15715081,15704123	Gene ID= ENSG00000133392.17 TPM= 6.02 Transcript Type= protein_coding
chr16	15785015	15857028	15785015	15857028	-	ENST00000571505.1@MYH11	ENST00000571505.1	protein_coding	15856941,15837908,15823255,15798660,15785015	15857028,15838269,15823411,15798687,15786732	Gene ID= ENSG00000133392.17 TPM= 4.25 Transcript Type= retained_intron
chr16	15865720	15888615	15865720	15888615	-	ENST00000255759.10@FOPNL	ENST00000255759.10	protein_coding	15888558,15884008,15879804,15873491,15865720	15888615,15884205,15879888,15873627,15867516	Gene ID= ENSG00000133393.12 TPM= 55.23 Transcript Type= protein_coding
chr16	15949577	16143062	15949577	16143062	+	ENST00000399410.7@ABCC1	ENST00000399410.7	protein_coding	15949577,16007816,16009776,16014491,16016496,16033109,16036472,16044450,16045836,16048142,16052724,16056092,16068156,16071642,16076326,16079352,16083366,16086824,16090405,16102627,16106738,16111375,16114766,16121975,16124789,16125810,16131789,16134350,16136478,16138364,16141173	15949799,16007992,16009901,16014628,16016621,16033170,16036603,16044680,16046013,16048303,16052816,16056295,16068302,16071729,16076401,16079478,16083542,16086991,16090588,16102717,16106873,16111582,16115076,16122174,16124915,16125911,16131935,16134508,16136644,16138558,16143062	Gene ID= ENSG00000103222.18 TPM= 12.75 Transcript Type= protein_coding
chr16	16143532	16145017	16143532	16145017	-	transcript1612.chr16.nnic@NA	transcript1612.chr16.nnic	NA	16143532	16145017	Gene ID= novel_gene_chr16_1613 TPM= 2.12 Transcript Type= NA
chr16	16232495	16294814	16232495	16294814	+	ENST00000399336.8@NOMO3	ENST00000399336.8	protein_coding	16232495,16236901,16239851,16243161,16245068,16247395,16250928,16251963,16252433,16255720,16256008,16261502,16263074,16263513,16265043,16267044,16270121,16270733,16273689,16273993,16275012,16275317,16277370,16278662,16280189,16281239,16283016,16285405,16287743,16293652,16294168	16232831,16236990,16239896,16243261,16245174,16247467,16251080,16252100,16252522,16255825,16256158,16261676,16263215,16263644,16265179,16267131,16270184,16270828,16273907,16274075,16275171,16275443,16277483,16278789,16280330,16281322,16283126,16285506,16287862,16293744,16294814	Gene ID= ENSG00000103226.17 TPM= 120.02 Transcript Type= protein_coding
chr16	16328414	16350590	16328414	16350590	+	transcript1625.chr16.nic@AC138969.1	transcript1625.chr16.nic	protein_coding	16328414,16328651,16328988,16329365,16331058,16331315,16331553,16331854,16333647,16336052,16340306,16344045,16344308,16347403,16348527,16348697,16350092	16328516,16328807,16329240,16329560,16331228,16331458,16331763,16331980,16333884,16336137,16340434,16344144,16344452,16347510,16348587,16348732,16350590	Gene ID= ENSG00000183889.12 TPM= 16.99 Transcript Type= NA
chr16	18358095	18380700	18358095	18380700	-	transcript1631.chr16.nic@AC126755.2	transcript1631.chr16.nic	protein_coding	18379908,18379475,18379155,18377488,18377258,18376953,18376736,18374832,18368258,18364535,18364227,18361170,18360093,18359948,18358095	18380700,18379727,18379350,18377658,18377401,18377163,18376862,18375069,18368386,18364634,18364371,18361277,18360153,18359983,18358588	Gene ID= ENSG00000233024.7 TPM= 12.75 Transcript Type= NA
chr16	18358095	18376839	18358095	18376839	-	ENST00000427999.6@AC126755.2	ENST00000427999.6	protein_coding	18376736,18374832,18372723,18368258,18364535,18364227,18361170,18360093,18359948,18358095	18376839,18375069,18372854,18368386,18364634,18364371,18361277,18360153,18359983,18358588	Gene ID= ENSG00000233024.7 TPM= 7.44 Transcript Type= protein_coding
chr16	18417325	18562211	18417325	18562211	-	ENST00000330537.10@NOMO2	ENST00000330537.10	protein_coding	18561876,18557702,18554807,18551439,18549521,18547228,18543617,18542594,18542172,18538859,18538526,18533005,18531466,18531037,18529501,18527537,18524489,18523844,18520765,18520597,18519501,18519229,18434654,18433348,18431807,18430815,18429010,18426630,18424274,18418392,18417325	18562211,18557791,18554852,18551539,18549627,18547300,18543769,18542731,18542261,18538964,18538676,18533179,18531607,18531168,18529637,18527624,18524552,18523939,18520983,18520679,18519660,18519355,18434767,18433475,18431948,18430898,18429120,18426731,18424393,18418484,18417968	Gene ID= ENSG00000185164.14 TPM= 10.09 Transcript Type= protein_coding
chr16	18417326	18433412	18417326	18433412	-	ENST00000620440.4@NOMO2	ENST00000620440.4	protein_coding	18433348,18431807,18430815,18429010,18426630,18424274,18418392,18417326	18433412,18431948,18430898,18429120,18426731,18424393,18418484,18417968	Gene ID= ENSG00000185164.14 TPM= 5.84 Transcript Type= protein_coding
chr16	18499925	18562162	18499925	18562162	-	transcript1637.chr16.nic@NOMO2	transcript1637.chr16.nic	protein_coding	18561876,18557702,18554807,18551439,18549521,18547228,18543617,18542594,18542172,18538859,18538526,18533005,18531466,18531037,18529501,18528013,18527537,18524489,18523844,18520765,18520597,18519501,18519229,18517189,18515883,18514342,18513350,18511546,18509166,18506873,18500991,18499925	18562162,18557791,18554852,18551539,18549627,18547300,18543769,18542731,18542261,18538964,18538676,18533179,18531607,18531168,18529637,18528071,18527624,18524552,18523939,18520983,18520679,18519660,18519355,18517302,18516010,18514483,18513433,18511656,18509267,18506992,18501083,18500567	Gene ID= ENSG00000185164.14 TPM= 20.36 Transcript Type= NA
chr16	18499925	18562112	18499925	18562112	-	ENST00000622306.4@NOMO2	ENST00000622306.4	protein_coding	18561876,18557702,18554807,18551439,18549521,18547228,18543617,18542594,18542172,18538859,18538526,18533005,18531466,18531037,18529501,18527537,18524489,18523844,18520765,18520597,18519501,18519229,18517189,18515883,18514342,18513350,18511546,18509166,18506873,18500991,18499925	18562112,18557791,18554852,18551539,18549627,18547300,18543769,18542731,18542261,18538964,18538676,18533179,18531607,18531168,18529637,18527624,18524552,18523939,18520983,18520679,18519660,18519355,18517302,18516010,18514483,18513433,18511656,18509267,18506992,18501083,18500567	Gene ID= ENSG00000185164.14 TPM= 111.71 Transcript Type= protein_coding
chr16	18499925	18562112	18499925	18562112	-	ENST00000621364.4@NOMO2	ENST00000621364.4	protein_coding	18561876,18557702,18554807,18551439,18549521,18547228,18543617,18542594,18542172,18538859,18538526,18533005,18531466,18531037,18529501,18527537,18524489,18523844,18520765,18520597,18519501,18519229,18517189,18515883,18514342,18513350,18511546,18509166,18506873,18500991,18500440,18499925	18562112,18557791,18554852,18551539,18549627,18547300,18543769,18542731,18542261,18538964,18538676,18533179,18531607,18531168,18529637,18527624,18524552,18523939,18520983,18520679,18519660,18519355,18517302,18516010,18514483,18513433,18511656,18509267,18506992,18501083,18500567,18500108	Gene ID= ENSG00000185164.14 TPM= 3.9 Transcript Type= protein_coding
chr16	18781295	18790334	18781295	18790334	-	ENST00000322989.8@RPS15A	ENST00000322989.8	protein_coding	18790244,18788981,18788063,18784738,18781295	18790334,18789118,18788142,18784823,18783102	Gene ID= ENSG00000134419.15 TPM= 25.49 Transcript Type= protein_coding
chr16	18782956	18790383	18782956	18790383	-	ENST00000563390.5@RPS15A	ENST00000563390.5	protein_coding	18790310,18788981,18788063,18784738,18782956	18790383,18789118,18788142,18784823,18783102	Gene ID= ENSG00000134419.15 TPM= 332.46 Transcript Type= protein_coding
chr16	18791667	18801678	18791667	18801678	-	ENST00000304414.11@ARL6IP1	ENST00000304414.11	protein_coding	18801431,18798701,18797925,18795464,18794599,18791667	18801678,18798834,18798044,18795581,18794683,18793370	Gene ID= ENSG00000170540.14 TPM= 67.98 Transcript Type= protein_coding
chr16	18804853	18926454	18804853	18926454	-	ENST00000446231.6@SMG1	ENST00000446231.6	protein_coding	18925950,18896793,18896052,18892218,18890863,18889372,18885541,18885090,18884070,18882165,18879495,18877131,18876124,18872494,18872184,18871364,18870801,18870610,18869854,18869104,18868523,18868190,18866621,18864002,18863650,18860667,18859556,18859022,18858170,18854656,18853583,18852318,18852067,18850237,18849949,18849217,18847816,18847453,18845429,18842208,18841565,18839698,18838551,18838357,18838014,18837253,18836360,18835933,18834892,18834204,18832940,18830219,18829926,18829286,18828031,18819502,18817291,18816302,18815440,18815175,18811948,18811761,18804853	18926454,18896956,18896207,18892354,18890921,18889585,18885666,18885162,18884167,18882338,18879719,18877232,18876393,18872624,18872345,18871482,18870888,18870711,18869994,18869303,18868719,18868354,18866775,18864144,18863851,18860776,18859703,18859181,18858290,18854904,18853867,18852462,18852205,18850467,18850126,18849378,18848033,18847607,18845651,18842454,18841794,18839946,18838689,18838466,18838232,18837443,18836532,18836212,18835164,18834438,18833166,18830369,18830115,18829755,18828168,18819654,18817470,18816529,18815651,18815281,18812127,18811867,18809646	Gene ID= ENSG00000157106.16 TPM= 14.87 Transcript Type= protein_coding
chr16	18984287	19063942	18984287	19063942	+	ENST00000421369.3@TMC7	ENST00000421369.3	protein_coding	18984287,19009172,19016450,19021629,19023113,19030224,19035676,19037874,19040289,19044884,19045341,19047063,19051686,19056542,19059416,19061778	18984581,19009415,19016598,19021796,19023195,19030369,19035823,19038047,19040446,19045001,19045438,19047249,19051816,19056697,19059494,19063942	Gene ID= ENSG00000170537.12 TPM= 2.12 Transcript Type= protein_coding
chr16	19067599	19080095	19067599	19080095	+	ENST00000321998.9@COQ7	ENST00000321998.9	protein_coding	19067599,19071928,19073921,19075721,19077306,19078081	19067737,19072106,19074035,19075860,19077374,19080095	Gene ID= ENSG00000167186.10 TPM= 2.12 Transcript Type= protein_coding
chr16	19067917	19078304	19067917	19078304	+	ENST00000544894.6@COQ7	ENST00000544894.6	protein_coding	19067917,19071928,19073921,19075721,19077306,19078081	19068008,19072106,19074035,19075860,19077374,19078304	Gene ID= ENSG00000167186.10 TPM= 2.12 Transcript Type= protein_coding
chr16	19114383	19121629	19114383	19121629	+	ENST00000381440.4@ITPRIPL2	ENST00000381440.4	protein_coding	19114383	19121629	Gene ID= ENSG00000205730.6 TPM= 11.68 Transcript Type= protein_coding
chr16	19502383	19522087	19502383	19522087	-	transcript1680.chr16.nic@GDE1	transcript1680.chr16.nic	protein_coding	19521704,19517014,19510839,19507655,19504881,19502383	19522087,19517189,19510944,19507779,19505092,19503617	Gene ID= ENSG00000006007.11 TPM= 4.25 Transcript Type= NA
chr16	19502383	19522123	19502383	19522123	-	ENST00000564172.1@GDE1	ENST00000564172.1	protein_coding	19521704,19517014,19510839,19507687,19504881,19502383	19522123,19517185,19510944,19507779,19505092,19503617	Gene ID= ENSG00000006007.11 TPM= 100.91 Transcript Type= nonsense_mediated_decay
chr16	19523811	19553408	19523811	19553408	+	ENST00000396212.6@CCP110	ENST00000396212.6	protein_coding	19523811,19525719,19527867,19532416,19535940,19540657,19541887,19542621,19542878,19544797,19545094,19545817,19546412,19547955,19551196	19524088,19525861,19528022,19532544,19537587,19540787,19542064,19542760,19542994,19544898,19545210,19545890,19546474,19548014,19553408	Gene ID= ENSG00000103540.16 TPM= 6.9 Transcript Type= protein_coding
chr16	19523857	19553408	19523857	19553408	+	ENST00000381396.9@CCP110	ENST00000381396.9	protein_coding	19523857,19527867,19532416,19535940,19540657,19541887,19542621,19542878,19544797,19545094,19545817,19546412,19547955,19548515,19551196	19524088,19528022,19532544,19537587,19540787,19542064,19542760,19542994,19544898,19545210,19545890,19546474,19548014,19548600,19553408	Gene ID= ENSG00000103540.16 TPM= 5.84 Transcript Type= protein_coding
chr16	19523879	19527169	19523879	19527169	+	ENST00000569190.1@CCP110	ENST00000569190.1	protein_coding	19523879,19524780	19524088,19527169	Gene ID= ENSG00000103540.16 TPM= 1.06 Transcript Type= retained_intron
chr16	19555703	19700687	19555703	19700687	+	transcript1690.chr16.nic@C16orf62	transcript1690.chr16.nic	protein_coding	19555703,19564851,19569424,19573119,19575098,19579052,19581525,19591790,19601664,19608178,19608974,19610322,19626177,19627694,19628637,19629767,19633092,19637594,19640015,19642396,19644886,19647784,19650382,19651976,19669160,19682225,19691353,19699502,19700378	19555746,19564950,19569591,19573241,19575122,19579128,19581653,19591874,19601723,19608274,19609021,19610415,19626223,19627805,19628753,19629820,19633172,19637656,19640100,19642476,19644949,19647882,19650459,19652090,19669299,19682390,19691471,19699648,19700687	Gene ID= ENSG00000103544.14 TPM= 9.56 Transcript Type= NA
chr16	19555720	19700689	19555720	19700689	+	ENST00000417362.6@C16orf62	ENST00000417362.6	protein_coding	19555720,19564851,19569424,19573119,19575098,19579052,19581525,19591790,19601664,19608178,19608974,19610322,19616114,19616686,19626177,19627694,19628637,19629767,19633092,19637594,19640015,19642396,19644886,19647784,19650382,19651976,19669160,19682225,19691353,19699502,19700378	19555746,19564950,19569591,19573241,19575122,19579128,19581653,19591874,19601723,19608274,19609021,19610415,19616191,19616808,19626223,19627805,19628753,19629820,19633172,19637656,19640100,19642476,19644949,19647882,19650459,19652090,19669299,19682390,19691471,19699648,19700689	Gene ID= ENSG00000103544.14 TPM= 41.42 Transcript Type= protein_coding
chr16	19701934	19718234	19701934	19718234	-	ENST00000219837.11@KNOP1	ENST00000219837.11	protein_coding	19718158,19714118,19711372,19710509,19701934	19718234,19715037,19711440,19710586,19707221	Gene ID= ENSG00000103550.13 TPM= 1.06 Transcript Type= protein_coding
chr16	19714384	19718234	19714384	19718234	-	transcript1696.chr16.nnic@KNOP1	transcript1696.chr16.nnic	protein_coding	19718158,19717351,19714384	19718234,19717485,19715037	Gene ID= ENSG00000103550.13 TPM= 2.12 Transcript Type= NA
chr16	19716456	19858467	19716456	19858467	+	ENST00000320394.10@IQCK	ENST00000320394.10	protein_coding	19716456,19717695,19730430,19733698,19735353,19763848,19764035,19788838,19827026,19856487	19716542,19718487,19730494,19733827,19735450,19763900,19764112,19788922,19827137,19858467	Gene ID= ENSG00000174628.16 TPM= 6.37 Transcript Type= protein_coding
chr16	19716456	19857539	19716456	19857539	+	ENST00000308214.13@IQCK	ENST00000308214.13	protein_coding	19716456,19717695,19730430,19733698,19735353,19788838,19827026,19856487	19716542,19718487,19730494,19733827,19735450,19788922,19827137,19857539	Gene ID= ENSG00000174628.16 TPM= 1.06 Transcript Type= nonsense_mediated_decay
chr16	19856691	19884917	19856691	19884917	-	ENST00000300571.6@GPRC5B	ENST00000300571.6	protein_coding	19884727,19871816,19861837,19856691	19884917,19872846,19861973,19860544	Gene ID= ENSG00000167191.11 TPM= 22.31 Transcript Type= protein_coding
chr16	20733664	20742084	20733664	20742084	-	ENST00000381337.6@THUMPD1	ENST00000381337.6	protein_coding	20741509,20738897,20737708,20736860,20733664	20742084,20739071,20737956,20737286,20736358	Gene ID= ENSG00000066654.13 TPM= 7.97 Transcript Type= protein_coding
chr16	20733664	20741821	20733664	20741821	-	transcript1721.chr16.nnic@THUMPD1	transcript1721.chr16.nnic	protein_coding	20741509,20738897,20737834,20733664	20741821,20739071,20737956,20735931	Gene ID= ENSG00000066654.13 TPM= 3.72 Transcript Type= NA
chr16	20735531	20741821	20735531	20741821	-	transcript1726.chr16.nic@THUMPD1	transcript1726.chr16.nic	protein_coding	20741509,20737708,20735531	20741821,20739071,20737286	Gene ID= ENSG00000066654.13 TPM= 2.12 Transcript Type= NA
chr16	20735375	20741796	20735375	20741796	-	ENST00000396083.6@THUMPD1	ENST00000396083.6	protein_coding	20741509,20738897,20737708,20735375	20741796,20739071,20737956,20737286	Gene ID= ENSG00000066654.13 TPM= 11.68 Transcript Type= protein_coding
chr16	20796340	20806458	20796340	20806458	-	transcript1730.chr16.nic@ERI2	transcript1730.chr16.nic	protein_coding	20805715,20803603,20803433,20802796,20801203,20800302,20799957,20799263,20796340	20806458,20803670,20803516,20802923,20801359,20800402,20800038,20799351,20799067	Gene ID= ENSG00000196678.13 TPM= 5.84 Transcript Type= NA
chr16	20796344	20806473	20796344	20806473	-	ENST00000357967.8@ERI2	ENST00000357967.8	protein_coding	20806408,20803603,20803433,20802796,20801203,20800302,20799957,20799263,20796344	20806473,20803670,20803516,20802923,20801359,20800402,20800038,20799351,20799067	Gene ID= ENSG00000196678.13 TPM= 1.94 Transcript Type= protein_coding
chr16	20796344	20806458	20796344	20806458	-	transcript1733.chr16.nic@ERI2	transcript1733.chr16.nic	protein_coding	20805715,20803603,20803433,20802796,20801203,20800302,20799957,20799263,20796344	20806458,20803670,20803516,20802923,20801359,20800402,20800038,20799351,20798211	Gene ID= ENSG00000196678.13 TPM= 2.47 Transcript Type= NA
chr16	20796344	20806476	20796344	20806476	-	ENST00000569729.5@ERI2	ENST00000569729.5	protein_coding	20806408,20803603,20803433,20802796,20801203,20800302,20799957,20799263,20796344	20806476,20803670,20803516,20802923,20801359,20800402,20800038,20799351,20798211	Gene ID= ENSG00000196678.13 TPM= 1.41 Transcript Type= protein_coding
chr16	20806499	20849668	20806499	20849668	+	ENST00000261377.10@REXO5	ENST00000261377.10	protein_coding	20806499,20806952,20813190,20814927,20816116,20821762,20824439,20825833,20827058,20827353,20828435,20832156,20833003,20839755,20840331,20843934,20844629,20845054,20846221,20849399	20806705,20807091,20813302,20815053,20816212,20821902,20824527,20825948,20827196,20827447,20828537,20832259,20833123,20839859,20840468,20844026,20844845,20845241,20846339,20849668	Gene ID= ENSG00000005189.19 TPM= 2.12 Transcript Type= protein_coding
chr16	20858517	20900358	20858517	20900358	-	transcript1736.chr16.nnic@ERI2	transcript1736.chr16.nnic	protein_coding	20900204,20896308,20862108,20858517	20900358,20896381,20862643,20860369	Gene ID= ENSG00000196678.13 TPM= 5.31 Transcript Type= NA
chr16	20854925	20900384	20854925	20900384	-	ENST00000324344.8@DCUN1D3	ENST00000324344.8	protein_coding	20900204,20862108,20854925	20900384,20862643,20860369	Gene ID= ENSG00000188215.9 TPM= 15.93 Transcript Type= protein_coding
chr16	20900413	20925006	20900413	20925006	+	transcript1738.chr16.nic@LYRM1	transcript1738.chr16.nic	protein_coding	20900413,20902486,20915556,20920122,20924000	20900535,20902717,20915714,20920214,20925006	Gene ID= ENSG00000102897.9 TPM= 4.6 Transcript Type= NA
chr16	20900753	20925004	20900753	20925004	+	ENST00000219168.8@LYRM1	ENST00000219168.8	protein_coding	20900753,20902486,20915556,20920122,20924000	20900889,20902717,20915714,20920214,20925004	Gene ID= ENSG00000102897.9 TPM= 5.13 Transcript Type= protein_coding
chr16	20900235	20925004	20900235	20925004	+	ENST00000439021.5@LYRM1	ENST00000439021.5	protein_coding	20900235,20915556,20920122,20924000	20900535,20915714,20920214,20925004	Gene ID= ENSG00000102897.9 TPM= 12.03 Transcript Type= protein_coding
chr16	20901104	20925006	20901104	20925006	+	ENST00000396052.3@LYRM1	ENST00000396052.3	protein_coding	20901104,20902486,20911183,20915556,20920122,20924000	20901189,20902717,20911264,20915714,20920214,20925006	Gene ID= ENSG00000102897.9 TPM= 1.94 Transcript Type= protein_coding
chr16	20900235	20925004	20900235	20925004	+	ENST00000412082.6@LYRM1	ENST00000412082.6	protein_coding	20900235,20920122,20924000	20900535,20920214,20925004	Gene ID= ENSG00000102897.9 TPM= 4.6 Transcript Type= protein_coding
chr16	20900766	20925006	20900766	20925006	+	transcript1749.chr16.nnic@LYRM1	transcript1749.chr16.nnic	protein_coding	20900766,20920122,20924000	20900889,20920214,20925006	Gene ID= ENSG00000102897.9 TPM= 3.54 Transcript Type= NA
chr16	21158591	21180616	21158591	21180616	+	transcript1752.chr16.nic@TMEM159	transcript1752.chr16.nic	protein_coding	21158591,21160978,21166840,21170437,21174010,21179475	21158746,21161278,21166911,21170605,21174148,21180616	Gene ID= ENSG00000011638.10 TPM= 12.93 Transcript Type= NA
chr16	21158377	21180616	21158377	21180616	+	ENST00000233047.8@TMEM159	ENST00000233047.8	protein_coding	21158377,21161085,21170437,21174010,21179475	21158746,21161278,21170605,21174148,21180616	Gene ID= ENSG00000011638.10 TPM= 80.9 Transcript Type= protein_coding
chr16	21158591	21162565	21158591	21162565	+	transcript1760.chr16.nic@TMEM159	transcript1760.chr16.nic	protein_coding	21158591,21160978	21158746,21162565	Gene ID= ENSG00000011638.10 TPM= 3.19 Transcript Type= NA
chr16	21158679	21180609	21158679	21180609	+	ENST00000261388.7@TMEM159	ENST00000261388.7	protein_coding	21158679,21160978,21170437,21174010,21179475	21158746,21161278,21170605,21174148,21180609	Gene ID= ENSG00000011638.10 TPM= 38.95 Transcript Type= protein_coding
chr16	21258521	21278524	21258521	21278524	-	transcript1764.chr16.nic@CRYM	transcript1764.chr16.nic	protein_coding	21278082,21277431,21275532,21269790,21267554,21262037,21261254,21258521	21278524,21277584,21275594,21269891,21267737,21262158,21261338,21258845	Gene ID= ENSG00000103316.10 TPM= 201.28 Transcript Type= NA
chr16	21268418	21269163	21268418	21269163	+	transcript1766.chr16.nnic@NA	transcript1766.chr16.nnic	NA	21268418	21269163	Gene ID= novel_gene_chr16_1767 TPM= 3.19 Transcript Type= NA
chr16	21599476	21657473	21599476	21657473	+	ENST00000358154.7@METTL9	ENST00000358154.7	protein_coding	21599476,21612645,21617865,21624931,21655227	21599898,21612835,21618074,21625115,21657473	Gene ID= ENSG00000197006.13 TPM= 101.97 Transcript Type= protein_coding
chr16	21599556	21655936	21599556	21655936	+	transcript1778.chr16.nic@METTL9	transcript1778.chr16.nic	protein_coding	21599556,21617865,21624931,21655227	21599898,21618074,21625115,21655936	Gene ID= ENSG00000197006.13 TPM= 16.99 Transcript Type= NA
chr16	21599558	21656119	21599558	21656119	+	ENST00000396014.8@METTL9	ENST00000396014.8	protein_coding	21599558,21612645,21617865,21624931,21655230	21599898,21612835,21618074,21625115,21656119	Gene ID= ENSG00000197006.13 TPM= 4.25 Transcript Type= protein_coding
chr16	21639537	21652660	21639537	21652660	-	ENST00000268389.5@IGSF6	ENST00000268389.5	protein_coding	21652532,21647133,21644290,21643548,21643074,21639537	21652660,21647492,21644396,21643598,21643154,21641593	Gene ID= ENSG00000140749.8 TPM= 1.06 Transcript Type= protein_coding
chr16	21794095	21795759	21794095	21795759	-	ENST00000567370.1@AC092375.2	ENST00000567370.1	lincRNA	21794095	21795759	Gene ID= ENSG00000260306.1 TPM= 1.06 Transcript Type= lincRNA
chr16	21952660	21983660	21952660	21983660	+	ENST00000268379.8@UQCRC2	ENST00000268379.8	protein_coding	21952660,21957235,21957417,21958535,21962460,21962761,21965408,21968628,21971525,21971923,21973896,21976167,21980547,21983088	21953456,21957318,21957566,21958599,21962516,21962885,21965505,21968685,21971620,21972122,21973976,21976243,21980700,21983660	Gene ID= ENSG00000140740.10 TPM= 971.35 Transcript Type= protein_coding
chr16	22206349	22286630	22206349	22286630	+	transcript1815.chr16.nnic@EEF2K	transcript1815.chr16.nnic	protein_coding	22206349,22225654,22244630,22248755,22250654,22251151,22256748,22257253,22257643,22258494,22260462,22263110,22266390,22266688,22273626,22280198,22283887	22206679,22225975,22244730,22248815,22250691,22251322,22256897,22257385,22257770,22258695,22260529,22263187,22266524,22266876,22273750,22280376,22286630	Gene ID= ENSG00000103319.11 TPM= 6.37 Transcript Type= NA
chr16	22297409	22335103	22297409	22335103	+	ENST00000299853.9@POLR3E	ENST00000299853.9	protein_coding	22297409,22302931,22305156,22308148,22308925,22309428,22313620,22314079,22315089,22316601,22316995,22317115,22318826,22322850,22324354,22324503,22325205,22325761,22328510,22332060,22333644	22297537,22303004,22305206,22308225,22309040,22309510,22313727,22314128,22315208,22316686,22317039,22317206,22318946,22322931,22324413,22324660,22325266,22326278,22328587,22332185,22335103	Gene ID= ENSG00000058600.15 TPM= 6.37 Transcript Type= protein_coding
chr16	22297375	22335101	22297375	22335101	+	ENST00000615879.4@POLR3E	ENST00000615879.4	protein_coding	22297375,22305156,22308148,22308925,22309428,22313620,22314079,22315089,22316601,22316995,22317115,22318826,22322850,22324354,22324503,22325205,22325761,22328510,22332060,22333644	22297537,22305206,22308225,22309040,22309510,22313727,22314128,22315208,22316686,22317039,22317206,22318946,22322931,22324413,22324660,22325266,22326278,22328587,22332185,22335101	Gene ID= ENSG00000058600.15 TPM= 1.06 Transcript Type= protein_coding
chr16	22345936	22437470	22345936	22437470	-	transcript1832.chr16.nnic@CDR2	transcript1832.chr16.nnic	protein_coding	22437005,22435682,22434627,22432726,22429796,22426213,22364902,22349701,22349279,22345936	22437470,22435812,22434811,22432834,22429948,22426366,22365014,22349849,22349443,22347823	Gene ID= ENSG00000140743.7 TPM= 2.12 Transcript Type= NA
chr16	22345936	22374617	22345936	22374617	-	ENST00000268383.6@CDR2	ENST00000268383.6	protein_coding	22374231,22364902,22349701,22349279,22345936	22374617,22365014,22349849,22349443,22347823	Gene ID= ENSG00000140743.7 TPM= 14.87 Transcript Type= protein_coding
chr16	22418672	22437715	22418672	22437715	-	ENST00000551766.5@RRN3P3	ENST00000551766.5	transcribed_unprocessed_pseudogene	22437005,22435682,22434627,22432726,22429796,22426213,22418672	22437715,22435812,22434811,22432834,22429948,22426366,22420594	Gene ID= ENSG00000257122.5 TPM= 1.06 Transcript Type= processed_transcript
chr16	22420407	22422387	22420407	22422387	+	transcript1847.chr16.nnic@NA	transcript1847.chr16.nnic	NA	22420407	22422387	Gene ID= novel_gene_chr16_1848 TPM= 2.12 Transcript Type= NA
chr16	22437016	22475377	22437016	22475377	+	transcript1830.chr16.nic@SMG1P1	transcript1830.chr16.nic	transcribed_unprocessed_pseudogene	22437016,22454702,22459355,22460787,22462121,22465693,22466197,22467191,22469023,22471628,22474125,22474949	22437492,22454865,22459491,22460842,22462334,22465818,22466269,22467288,22469195,22471852,22474226,22475377	Gene ID= ENSG00000237296.9 TPM= 5.31 Transcript Type= NA
chr16	23061406	23064173	23061406	23064173	-	ENST00000563129.2@AC127459.1	ENST00000563129.2	3prime_overlapping_ncRNA	23061406	23064173	Gene ID= ENSG00000260566.2 TPM= 2.12 Transcript Type= 3prime_overlapping_ncRNA
chr16	23078979	23149461	23078979	23149461	-	transcript1855.chr16.nic@USP31	transcript1855.chr16.nic	protein_coding	23148638,23108046,23106399,23106213,23105441,23102319,23090624,23087724,23087092,23085585,23084860,23082438,23078979	23149461,23108183,23106487,23106305,23105576,23102463,23090804,23087835,23087186,23085662,23084989,23082557,23080171	Gene ID= ENSG00000103404.14 TPM= 6.37 Transcript Type= NA
chr16	23064117	23068123	23064117	23068123	-	transcript1861.chr16.nnic@NA	transcript1861.chr16.nnic	NA	23064117	23068123	Gene ID= novel_gene_chr16_1862 TPM= 13.81 Transcript Type= NA
chr16	23133839	23136667	23133839	23136667	+	transcript1859.chr16.nnic@NA	transcript1859.chr16.nnic	NA	23133839	23136667	Gene ID= novel_gene_chr16_1860 TPM= 2.12 Transcript Type= NA
chr16	23388493	23453180	23388493	23453180	-	ENST00000307149.9@COG7	ENST00000307149.9	protein_coding	23452826,23445813,23445048,23442477,23434636,23433545,23424749,23418700,23416967,23413448,23410295,23406076,23403694,23398046,23393233,23392380,23388493	23453180,23445961,23445164,23442645,23434718,23433667,23424947,23418827,23417121,23413564,23410360,23406262,23403834,23398129,23393347,23392523,23389086	Gene ID= ENSG00000168434.12 TPM= 10.62 Transcript Type= protein_coding
chr16	23466591	23510499	23466591	23510499	-	transcript1881.chr16.nic@GGA2	transcript1881.chr16.nic	protein_coding	23510321,23495694,23493360,23491677,23488606,23486710,23486015,23482923,23480645,23479765,23478883,23478368,23474904,23469996,23468886,23466591	23510499,23495778,23494378,23491800,23488709,23486790,23486152,23483004,23480770,23479887,23478911,23478501,23475061,23470165,23468996,23467700	Gene ID= ENSG00000103365.15 TPM= 5.31 Transcript Type= NA
chr16	23522014	23557375	23522014	23557375	-	ENST00000449606.5@EARS2	ENST00000449606.5	protein_coding	23557205,23552149,23544514,23534888,23532657,23529744,23529502,23525244,23522014	23557375,23552304,23544703,23535360,23532765,23529897,23529632,23525379,23524454	Gene ID= ENSG00000103356.15 TPM= 10.62 Transcript Type= protein_coding
chr16	23557705	23570857	23557705	23570857	+	transcript1892.chr16.nnic@UBFD1	transcript1892.chr16.nnic	protein_coding	23557705,23557950,23559468,23562206,23562625,23564039,23566987,23570480	23557767,23558279,23559676,23562271,23562730,23564109,23567069,23570857	Gene ID= ENSG00000103353.15 TPM= 2.12 Transcript Type= NA
chr16	23557362	23574389	23557362	23574389	+	ENST00000395878.7@UBFD1	ENST00000395878.7	protein_coding	23557362,23557950,23559468,23562206,23562625,23566987,23570480	23557767,23558279,23559676,23562271,23562730,23567069,23574389	Gene ID= ENSG00000103353.15 TPM= 35.05 Transcript Type= protein_coding
chr16	23557771	23570857	23557771	23570857	+	transcript1898.chr16.nic@UBFD1	transcript1898.chr16.nic	protein_coding	23557771,23559468,23562206,23562625,23566987,23570480	23558279,23559676,23562271,23562730,23567069,23570857	Gene ID= ENSG00000103353.15 TPM= 2.12 Transcript Type= NA
chr16	23581002	23596356	23581002	23596356	-	ENST00000007516.7@NDUFAB1	ENST00000007516.7	protein_coding	23596123,23587197,23585336,23582276,23581002	23596356,23587319,23585423,23582375,23581173	Gene ID= ENSG00000004779.9 TPM= 384.5 Transcript Type= protein_coding
chr16	23603160	23641329	23603160	23641329	-	transcript1908.chr16.nic@PALB2	transcript1908.chr16.nic	protein_coding	23641110,23638070,23637850,23634862,23629640,23629204,23626236,23624009,23622969,23621362,23614004,23603160	23641329,23638129,23637952,23636334,23630469,23629275,23626397,23624094,23623130,23621478,23614091,23603669	Gene ID= ENSG00000083093.9 TPM= 3.19 Transcript Type= NA
chr16	23641392	23677455	23641392	23677455	+	ENST00000300087.6@DCTN5	ENST00000300087.6	protein_coding	23641392,23642955,23658507,23661170,23665626,23667047	23641590,23643023,23658625,23661281,23665728,23677455	Gene ID= ENSG00000166847.9 TPM= 6.37 Transcript Type= protein_coding
chr16	23645139	23647913	23645139	23647913	-	transcript1912.chr16.nnic@NA	transcript1912.chr16.nnic	NA	23645139	23647913	Gene ID= novel_gene_chr16_1913 TPM= 3.19 Transcript Type= NA
chr16	24539563	24540586	24539563	24540586	+	transcript1924.chr16.nnic@NA	transcript1924.chr16.nnic	NA	24539563	24540586	Gene ID= novel_gene_chr16_1925 TPM= 10.62 Transcript Type= NA
chr16	24729677	24750777	24729677	24750777	+	transcript1932.chr16.nic@TNRC6A	transcript1932.chr16.nic	protein_coding	24729677,24730253,24750726	24729846,24730300,24750777	Gene ID= ENSG00000090905.18 TPM= 13.81 Transcript Type= NA
chr16	24824244	24825459	24824244	24825459	+	transcript1934.chr16.nnic@NA	transcript1934.chr16.nnic	NA	24824244	24825459	Gene ID= novel_gene_chr16_1935 TPM= 4.25 Transcript Type= NA
chr16	24919385	25015331	24919385	25015331	-	ENST00000289968.10@ARHGAP17	ENST00000289968.10	protein_coding	25015209,24978966,24977215,24970507,24968661,24968351,24964197,24959911,24959671,24954603,24952931,24952289,24949404,24947482,24943771,24941987,24939364,24935470,24930784,24919385	25015331,24979005,24977319,24970580,24968772,24968427,24964308,24959979,24959752,24954730,24953042,24952370,24949484,24947595,24943862,24942143,24939597,24935639,24931404,24920260	Gene ID= ENSG00000140750.16 TPM= 5.31 Transcript Type= protein_coding
chr16	24919395	24931160	24919395	24931160	-	ENST00000571843.1@ARHGAP17	ENST00000571843.1	protein_coding	24930784,24927684,24919395	24931160,24927732,24920260	Gene ID= ENSG00000140750.16 TPM= 5.31 Transcript Type= protein_coding
chr16	24919393	25015331	24919393	25015331	-	ENST00000303665.9@ARHGAP17	ENST00000303665.9	protein_coding	25015209,24978966,24977215,24970507,24968661,24968351,24964197,24959911,24959671,24954603,24952931,24952289,24949404,24947482,24943771,24941987,24935470,24930784,24919393	25015331,24979005,24977319,24970580,24968772,24968427,24964308,24959979,24959752,24954730,24953042,24952370,24949484,24947595,24943862,24942143,24935639,24931404,24920260	Gene ID= ENSG00000140750.16 TPM= 15.93 Transcript Type= protein_coding
chr16	24919390	24922922	24919390	24922922	-	transcript1948.chr16.nnic@NA	transcript1948.chr16.nnic	NA	24919390	24922922	Gene ID= novel_gene_chr16_1949 TPM= 4.25 Transcript Type= NA
chr16	24956944	24959020	24956944	24959020	+	transcript1946.chr16.nnic@NA	transcript1946.chr16.nnic	NA	24956944	24959020	Gene ID= novel_gene_chr16_1947 TPM= 2.12 Transcript Type= NA
chr16	24976147	24978883	24976147	24978883	+	transcript1944.chr16.nnic@NA	transcript1944.chr16.nnic	NA	24976147	24978883	Gene ID= novel_gene_chr16_1945 TPM= 18.06 Transcript Type= NA
chr16	25066937	25068943	25066937	25068943	+	ENST00000571219.1@LINC02175	ENST00000571219.1	lincRNA	25066937,25067779	25067646,25068943	Gene ID= ENSG00000262155.1 TPM= 3.19 Transcript Type= lincRNA
chr16	25085592	25111442	25085592	25111442	-	transcript1967.chr16.nic@LCMT1-AS1	transcript1967.chr16.nic	lincRNA	25111396,25103351,25085592	25111442,25103641,25085772	Gene ID= ENSG00000260448.5 TPM= 2.12 Transcript Type= NA
chr16	25106569	25107102	25106569	25107102	-	ENST00000613406.1@AC133552.6	ENST00000613406.1	sense_intronic	25106569	25107102	Gene ID= ENSG00000275494.1 TPM= 3.19 Transcript Type= sense_intronic
chr16	25110286	25110384	25110286	25110384	-	transcript1969.chr16.nnic@NA	transcript1969.chr16.nnic	NA	25110286	25110384	Gene ID= novel_gene_chr16_1970 TPM= 2.12 Transcript Type= NA
chr16	25111731	25178228	25111731	25178228	+	transcript1958.chr16.nic@LCMT1	transcript1958.chr16.nic	protein_coding	25111731,25128475,25132402,25140171,25151554,25161102,25164598,25169112,25170714,25174937,25178001	25111768,25128566,25132523,25140247,25151615,25161204,25164718,25169213,25170805,25175034,25178228	Gene ID= ENSG00000205629.11 TPM= 16.46 Transcript Type= NA
chr16	25111729	25178231	25111729	25178231	+	ENST00000399069.7@LCMT1	ENST00000399069.7	protein_coding	25111729,25128475,25132402,25140171,25151554,25161102,25164598,25169112,25170714,25174937,25178001	25111996,25128566,25132523,25140247,25151615,25161204,25164718,25169213,25170805,25175034,25178231	Gene ID= ENSG00000205629.11 TPM= 81.26 Transcript Type= protein_coding
chr16	25111735	25178198	25111735	25178198	+	ENST00000564011.5@LCMT1	ENST00000564011.5	protein_coding	25111735,25128475,25132402,25140171,25164598,25169112,25170714,25174937,25178001	25111996,25128570,25132523,25140247,25164718,25169213,25170805,25175034,25178198	Gene ID= ENSG00000205629.11 TPM= 7.44 Transcript Type= nonsense_mediated_decay
chr16	25236001	25257931	25236001	25257931	-	ENST00000328086.11@ZKSCAN2	ENST00000328086.11	protein_coding	25256729,25255206,25252946,25251909,25246707,25243785,25236001	25257931,25255392,25253037,25252035,25247390,25244276,25240738	Gene ID= ENSG00000155592.15 TPM= 1.06 Transcript Type= protein_coding
chr16	27203495	27221768	27203495	27221768	+	ENST00000286096.8@KDM8	ENST00000286096.8	protein_coding	27203495,27210093,27213585,27214876,27215945,27218961,27220393,27220566	27203636,27210621,27213751,27215008,27215989,27219110,27220485,27221768	Gene ID= ENSG00000155666.11 TPM= 3.19 Transcript Type= protein_coding
chr16	27224991	27268794	27224991	27268794	-	ENST00000361439.8@NSMCE1	ENST00000361439.8	protein_coding	27268706,27257435,27235178,27234188,27233001,27226720,27225726,27224991	27268794,27257581,27235299,27234265,27233147,27226836,27225846,27225236	Gene ID= ENSG00000169189.16 TPM= 19.12 Transcript Type= protein_coding
chr16	27225025	27268741	27225025	27268741	-	ENST00000565070.5@NSMCE1	ENST00000565070.5	protein_coding	27268706,27257435,27235178,27234188,27233001,27225726,27225025	27268741,27257581,27235299,27234265,27233147,27226836,27225236	Gene ID= ENSG00000169189.16 TPM= 1.06 Transcript Type= retained_intron
chr16	27497766	27549936	27497766	27549936	-	transcript1986.chr16.nic@GTF3C1	transcript1986.chr16.nic	protein_coding	27549670,27545314,27538180,27537784,27533291,27528598,27511749,27508540,27506847,27505899,27502859,27501191,27498630,27497766	27549936,27545523,27538356,27537927,27533387,27528721,27511901,27508655,27507156,27506116,27502995,27501344,27498733,27497821	Gene ID= ENSG00000077235.17 TPM= 7.08 Transcript Type= NA
chr16	27460613	27549913	27460613	27549913	-	ENST00000561623.5@GTF3C1	ENST00000561623.5	protein_coding	27549670,27545314,27538180,27537784,27533291,27528598,27511749,27508540,27506847,27505899,27502859,27501191,27498630,27497637,27495211,27494763,27493199,27492617,27492338,27489602,27489043,27488554,27488227,27485997,27484211,27483044,27481079,27478469,27476451,27471748,27470108,27469291,27465260,27464395,27463541,27462294,27460613	27549913,27545523,27538356,27537927,27533387,27528721,27511901,27508655,27507156,27506116,27502995,27501344,27498733,27497821,27495492,27494908,27493296,27492713,27492515,27489743,27489178,27488635,27488415,27486154,27484353,27483125,27481191,27478531,27476544,27471920,27470395,27469550,27465540,27464836,27463592,27462486,27461562	Gene ID= ENSG00000077235.17 TPM= 35.76 Transcript Type= protein_coding
chr16	27460678	27549906	27460678	27549906	-	ENST00000356183.8@GTF3C1	ENST00000356183.8	protein_coding	27549670,27545314,27538180,27537784,27533291,27528598,27511749,27508540,27506847,27505899,27502859,27501191,27498630,27497637,27495211,27494763,27493199,27492617,27492338,27489602,27489043,27488554,27488227,27485997,27484211,27483044,27481079,27478469,27476451,27471748,27470108,27469291,27465260,27464320,27463541,27462294,27460678	27549906,27545523,27538356,27537927,27533387,27528721,27511901,27508655,27507156,27506116,27502995,27501344,27498733,27497821,27495492,27494908,27493296,27492713,27492515,27489743,27489178,27488635,27488415,27486154,27484353,27483125,27481191,27478531,27476544,27471920,27470395,27469550,27465540,27464836,27463592,27462486,27461562	Gene ID= ENSG00000077235.17 TPM= 16.64 Transcript Type= protein_coding
chr16	28262455	28265116	28262455	28265116	+	transcript2000.chr16.nnic@NA	transcript2000.chr16.nnic	NA	28262455	28265116	Gene ID= novel_gene_chr16_2001 TPM= 2.12 Transcript Type= NA
chr16	28284973	28287120	28284973	28287120	+	transcript2002.chr16.nnic@NA	transcript2002.chr16.nnic	NA	28284973	28287120	Gene ID= novel_gene_chr16_2003 TPM= 2.12 Transcript Type= NA
chr16	28322080	28323334	28322080	28323334	+	transcript2005.chr16.nnic@NA	transcript2005.chr16.nnic	NA	28322080	28323334	Gene ID= novel_gene_chr16_2006 TPM= 2.12 Transcript Type= NA
chr16	28376924	28378165	28376924	28378165	+	transcript2009.chr16.nnic@NA	transcript2009.chr16.nnic	NA	28376924	28378165	Gene ID= novel_gene_chr16_2010 TPM= 20.18 Transcript Type= NA
chr16	28475351	28492293	28475351	28492293	-	ENST00000636147.1@CLN3	ENST00000636147.1	protein_coding	28492020,28491714,28491482,28489290,28488591,28487662,28487456,28486578,28486347,28484006,28482626,28482477,28482327,28482105,28477737,28475351	28492293,28491835,28491560,28489386,28488662,28487741,28487541,28486650,28486490,28484118,28482672,28482545,28482382,28482198,28477877,28477635	Gene ID= ENSG00000188603.18 TPM= 11.68 Transcript Type= protein_coding
chr16	28477272	28492074	28477272	28492074	-	ENST00000359984.12@CLN3	ENST00000359984.12	protein_coding	28491714,28491482,28489290,28488591,28487662,28487456,28486578,28486347,28484006,28482626,28482477,28482327,28482105,28477737,28477272	28492074,28491560,28489386,28488662,28487741,28487541,28486650,28486490,28484118,28482672,28482545,28482382,28482198,28477877,28477635	Gene ID= ENSG00000188603.18 TPM= 4.78 Transcript Type= protein_coding
chr16	28477280	28492005	28477280	28492005	-	ENST00000357857.14@CLN3	ENST00000357857.14	protein_coding	28491714,28489290,28488591,28487662,28487456,28486578,28486347,28484006,28482626,28482477,28482327,28482105,28477737,28477280	28492005,28489386,28488662,28487741,28487541,28486650,28486490,28484118,28482672,28482545,28482382,28482198,28477877,28477635	Gene ID= ENSG00000188603.18 TPM= 2.66 Transcript Type= protein_coding
chr16	28496694	28498970	28496694	28498970	+	transcript2018.chr16.nic@APOBR	transcript2018.chr16.nic	protein_coding	28496694,28498081,28498436	28497996,28498349,28498970	Gene ID= ENSG00000184730.10 TPM= 4.25 Transcript Type= NA
chr16	28532708	28539174	28532708	28539174	-	ENST00000324873.7@NUPR1	ENST00000324873.7	protein_coding	28538796,28538006,28532708	28539174,28538155,28537669	Gene ID= ENSG00000176046.8 TPM= 67.98 Transcript Type= protein_coding
chr16	28553709	28554140	28553709	28554140	-	ENST00000613454.1@AC020765.2	ENST00000613454.1	antisense_RNA	28553709	28554140	Gene ID= ENSG00000275441.1 TPM= 1.06 Transcript Type= antisense_RNA
chr16	28553926	28591790	28553926	28591790	+	ENST00000317058.7@SGF29	ENST00000317058.7	protein_coding	28553926,28581055,28584913,28585648,28589100,28590096,28590296,28590631,28590773,28591590	28554097,28581144,28584988,28585720,28589164,28590225,28590442,28590666,28590935,28591790	Gene ID= ENSG00000176476.8 TPM= 13.81 Transcript Type= protein_coding
chr16	28605592	28623553	28605592	28623553	-	ENST00000562058.5@SULT1A1	ENST00000562058.5	protein_coding	28623131,28620063,28609931,28608708,28608478,28608291,28606951,28606761,28606056,28605592	28623553,28620133,28610191,28608859,28608603,28608388,28607077,28606855,28606236,28605933	Gene ID= ENSG00000196502.11 TPM= 37.18 Transcript Type= nonsense_mediated_decay
chr16	28688558	28735598	28688558	28735598	+	ENST00000566501.5@EIF3C	ENST00000566501.5	protein_coding	28688558,28711657,28713701,28713909,28714321,28714636,28714819,28715307,28723164,28723448,28724322,28724658,28724919,28726605,28727021,28731829,28734520,28734778,28734932,28735173,28735431	28688828,28711787,28713766,28714098,28714446,28714690,28714928,28715434,28723323,28723551,28724463,28724783,28725012,28726795,28727245,28732192,28734679,28734843,28735019,28735335,28735598	Gene ID= ENSG00000184110.14 TPM= 27.88 Transcript Type= protein_coding
chr16	28711363	28735730	28711363	28735730	+	ENST00000331666.10@EIF3C	ENST00000331666.10	protein_coding	28711363,28711657,28713701,28713909,28714321,28714636,28714819,28715307,28723164,28723448,28724322,28724658,28724919,28726605,28727021,28731829,28734520,28734778,28734932,28735173,28735431	28711518,28711787,28713766,28714098,28714446,28714690,28714928,28715434,28723323,28723551,28724463,28724783,28725012,28726795,28727245,28732192,28734679,28734843,28735019,28735335,28735730	Gene ID= ENSG00000184110.14 TPM= 55.5 Transcript Type= protein_coding
chr16	28711474	28735596	28711474	28735596	+	ENST00000564243.5@EIF3C	ENST00000564243.5	protein_coding	28711474,28711657,28713701,28713909,28714351,28714636,28714819,28715307,28723164,28723448,28724322,28724658,28724919,28726605,28727021,28731829,28734520,28734778,28734932,28735173,28735431	28711518,28711787,28713766,28714098,28714446,28714690,28714928,28715434,28723323,28723551,28724463,28724783,28725012,28726795,28727245,28732192,28734679,28734843,28735019,28735335,28735596	Gene ID= ENSG00000184110.14 TPM= 401.76 Transcript Type= protein_coding
chr16	28711527	28735597	28711527	28735597	+	ENST00000566866.5@EIF3C	ENST00000566866.5	protein_coding	28711527,28713701,28713909,28714321,28714636,28714819,28715307,28723164,28723448,28724322,28724658,28724919,28726605,28727021,28731829,28734520,28734778,28734932,28735173,28735431	28711787,28713766,28714098,28714446,28714690,28714928,28715434,28723323,28723551,28724463,28724783,28725012,28726795,28727245,28732192,28734679,28734843,28735019,28735335,28735597	Gene ID= ENSG00000184110.14 TPM= 27.88 Transcript Type= protein_coding
chr16	28802743	28817828	28802743	28817828	+	ENST00000507031.2@AC145285.2	ENST00000507031.2	lincRNA	28802743,28816136	28803012,28817828	Gene ID= ENSG00000251417.2 TPM= 1.06 Transcript Type= lincRNA
chr16	28823000	28825068	28823000	28825068	+	transcript2048.chr16.nnic@NA	transcript2048.chr16.nnic	NA	28823000	28825068	Gene ID= novel_gene_chr16_2049 TPM= 4.25 Transcript Type= NA
chr16	28863826	28874201	28863826	28874201	+	transcript2054.chr16.nic@SH2B1	transcript2054.chr16.nic	protein_coding	28863826,28866012,28867331,28869006,28869208,28871780,28872190,28872534,28873170,28873447	28863945,28867033,28867432,28869097,28869383,28871983,28872401,28872705,28873269,28874201	Gene ID= ENSG00000178188.14 TPM= 43.02 Transcript Type= NA
chr16	28863805	28874205	28863805	28874205	+	ENST00000359285.9@SH2B1	ENST00000359285.9	protein_coding	28863805,28866012,28867331,28869006,28869208,28871780,28872190,28872534,28873170,28873447	28863945,28867033,28867432,28869097,28869383,28871983,28872401,28872758,28873269,28874205	Gene ID= ENSG00000178188.14 TPM= 18.59 Transcript Type= protein_coding
chr16	28878957	28879920	28878957	28879920	-	ENST00000566956.1@ATP2A1-AS1	ENST00000566956.1	antisense_RNA	28879542,28878957	28879920,28879107	Gene ID= ENSG00000260442.5 TPM= 3.19 Transcript Type= antisense_RNA
chr16	28878405	28904464	28878405	28904464	+	ENST00000357084.7@ATP2A1	ENST00000357084.7	protein_coding	28878405,28879099,28879501,28880915,28882451,28884575,28887189,28887425,28888787,28894155,28894505,28894822,28898000,28898233,28900581,28901863,28902184,28902580,28902778,28903030,28903323,28904180	28878789,28879116,28879583,28881019,28882589,28884655,28887274,28887722,28888953,28894243,28894607,28894953,28898125,28898451,28900916,28902083,28902386,28902665,28902911,28903147,28903440,28904464	Gene ID= ENSG00000196296.13 TPM= 1.06 Transcript Type= protein_coding
chr16	28904421	28925752	28904421	28925752	-	ENST00000358201.8@RABEP2	ENST00000358201.8	protein_coding	28925103,28924403,28919786,28914672,28914236,28911084,28910888,28908609,28906019,28905867,28905704,28905397,28904421	28925752,28924615,28919943,28914782,28914586,28911179,28910986,28908764,28906196,28905878,28905759,28905513,28905044	Gene ID= ENSG00000177548.12 TPM= 26.55 Transcript Type= protein_coding
chr16	28950990	28954650	28950990	28954650	+	transcript2091.chr16.nic@NFATC2IP	transcript2091.chr16.nic	protein_coding	28950990,28952132,28954565	28951398,28952204,28954650	Gene ID= ENSG00000176953.12 TPM= 2.12 Transcript Type= NA
chr16	28950937	28967097	28950937	28967097	+	ENST00000320805.8@NFATC2IP	ENST00000320805.8	protein_coding	28950937,28952132,28954565,28955978,28956151,28958717,28958991,28963705	28951398,28952204,28954682,28956058,28956337,28958861,28959100,28967097	Gene ID= ENSG00000176953.12 TPM= 2.12 Transcript Type= protein_coding
chr16	28974772	28984548	28974772	28984548	+	ENST00000565975.5@SPNS1	ENST00000565975.5	protein_coding	28974772,28975101,28975492,28977908,28979155,28979405,28981470,28981901,28982356,28982857,28983192,28983786,28984205	28974863,28975392,28975557,28978044,28979306,28979471,28981615,28982056,28982545,28982922,28983290,28983957,28984548	Gene ID= ENSG00000169682.17 TPM= 5.66 Transcript Type= protein_coding
chr16	28974775	28984543	28974775	28984543	+	ENST00000311008.15@SPNS1	ENST00000311008.15	protein_coding	28974775,28975492,28977908,28979155,28979405,28981470,28981901,28982356,28982857,28983192,28983786,28984205	28975392,28975557,28978044,28979306,28979471,28981615,28982056,28982545,28982922,28983290,28983957,28984543	Gene ID= ENSG00000169682.17 TPM= 24.78 Transcript Type= protein_coding
chr16	28974773	28984517	28974773	28984517	+	transcript2101.chr16.nic@SPNS1	transcript2101.chr16.nic	protein_coding	28974773,28975492,28977908,28979155,28979405,28981470,28981901,28982356,28982857,28983192,28984205	28975392,28975557,28978044,28979306,28979471,28981615,28982056,28982545,28982922,28983290,28984517	Gene ID= ENSG00000169682.17 TPM= 2.66 Transcript Type= NA
chr16	28974794	28984543	28974794	28984543	+	ENST00000323081.12@SPNS1	ENST00000323081.12	protein_coding	28974794,28975188,28975492,28977908,28979155,28979405,28981470,28981901,28982356,28982857,28983192,28983786,28984205	28975100,28975392,28975557,28978044,28979306,28979471,28981615,28982056,28982545,28982922,28983290,28983957,28984543	Gene ID= ENSG00000169682.17 TPM= 6.19 Transcript Type= protein_coding
chr16	28985096	28990773	28985096	28990773	+	ENST00000395456.6@LAT	ENST00000395456.6	protein_coding	28985096,28985713,28985854,28986135,28986382,28986540,28986657,28986799,28989527,28989774,28989933,28990189	28985517,28985740,28985888,28986216,28986446,28986569,28986714,28986893,28989589,28989839,28990019,28990773	Gene ID= ENSG00000213658.11 TPM= 1.06 Transcript Type= protein_coding
chr16	29286145	29287688	29286145	29287688	-	transcript2113.chr16.nnic@NA	transcript2113.chr16.nnic	NA	29286145	29287688	Gene ID= novel_gene_chr16_2114 TPM= 5.31 Transcript Type= NA
chr16	29344575	29349792	29344575	29349792	+	transcript2116.chr16.nnic@NA	transcript2116.chr16.nnic	NA	29344575	29349792	Gene ID= novel_gene_chr16_2117 TPM= 3.19 Transcript Type= NA
chr16	29453593	29454964	29453593	29454964	-	ENST00000330978.3@BOLA2	ENST00000330978.3	protein_coding	29454191,29454016,29453593	29454964,29454113,29453732	Gene ID= ENSG00000183336.8 TPM= 14.87 Transcript Type= protein_coding
chr16	29443249	29454188	29443249	29454188	-	transcript2128.chr16.nic@BOLA2-SMG1P6	transcript2128.chr16.nic	protein_coding	29454016,29446802,29444398,29443249	29454188,29447026,29444499,29443688	Gene ID= ENSG00000261740.6 TPM= 3.19 Transcript Type= NA
chr16	29443230	29454347	29443230	29454347	-	ENST00000569622.5@BOLA2-SMG1P6	ENST00000569622.5	protein_coding	29454191,29454016,29446802,29444398,29443230	29454347,29454113,29446922,29444499,29443688	Gene ID= ENSG00000261740.6 TPM= 7.44 Transcript Type= protein_coding
chr16	29454501	29458219	29454501	29458219	+	ENST00000330181.9@SLX1B	ENST00000330181.9	protein_coding	29454501,29455398,29455544,29457632,29457928,29458095	29454930,29455449,29455885,29457759,29458015,29458219	Gene ID= ENSG00000181625.17 TPM= 9.56 Transcript Type= protein_coding
chr16	29454562	29458219	29454562	29458219	+	ENST00000351581.4@SLX1B	ENST00000351581.4	protein_coding	29454562,29455398,29457632,29457928,29458095	29454930,29455449,29457759,29458015,29458219	Gene ID= ENSG00000181625.17 TPM= 1.06 Transcript Type= protein_coding
chr16	29669966	29670862	29669966	29670862	+	transcript2133.chr16.nnic@NA	transcript2133.chr16.nnic	NA	29669966	29670862	Gene ID= novel_gene_chr16_2134 TPM= 2.12 Transcript Type= NA
chr16	29679037	29698699	29679037	29698699	+	ENST00000395384.8@QPRT	ENST00000395384.8	protein_coding	29679037,29694664,29696996,29697199	29679210,29695199,29697127,29698699	Gene ID= ENSG00000103485.17 TPM= 8.5 Transcript Type= protein_coding
chr16	29790710	29805384	29790710	29805384	+	transcript2144.chr16.nic@KIF22	transcript2144.chr16.nic	protein_coding	29790710,29796893,29798374,29798593,29798975,29799264,29799628,29799913,29802769,29803449,29803998,29805115,29805263	29790829,29797088,29798501,29798747,29799184,29799494,29799781,29800048,29802937,29803608,29805026,29805174,29805384	Gene ID= ENSG00000079616.12 TPM= 58.95 Transcript Type= NA
chr16	29804717	29805384	29804717	29805384	+	transcript2166.chr16.nnic@KIF22	transcript2166.chr16.nnic	protein_coding	29804717,29805263	29805026,29805384	Gene ID= ENSG00000079616.12 TPM= 6.37 Transcript Type= NA
chr16	29790720	29805385	29790720	29805385	+	ENST00000160827.8@KIF22	ENST00000160827.8	protein_coding	29790720,29796893,29798374,29798593,29798975,29799264,29799628,29799913,29802769,29803449,29803998,29804814,29805115,29805263	29790829,29797088,29798501,29798747,29799184,29799494,29799781,29800048,29802937,29803608,29804065,29805026,29805174,29805385	Gene ID= ENSG00000079616.12 TPM= 79.13 Transcript Type= protein_coding
chr16	29806106	29811160	29806106	29811160	+	ENST00000545521.5@MAZ	ENST00000545521.5	protein_coding	29806106,29806807,29806978,29808230,29808570,29810077	29806180,29806893,29807828,29808293,29808741,29811160	Gene ID= ENSG00000103495.13 TPM= 12.21 Transcript Type= protein_coding
chr16	29806537	29811164	29806537	29811164	+	ENST00000322945.10@MAZ	ENST00000322945.10	protein_coding	29806537,29806978,29808230,29808570,29810077	29806893,29807828,29808293,29808741,29811164	Gene ID= ENSG00000103495.13 TPM= 67.45 Transcript Type= protein_coding
chr16	29806596	29811164	29806596	29811164	+	ENST00000219782.10@MAZ	ENST00000219782.10	protein_coding	29806596,29806978,29808230,29808570,29809540,29810077	29806893,29807828,29808293,29808741,29809764,29811164	Gene ID= ENSG00000103495.13 TPM= 46.74 Transcript Type= protein_coding
chr16	29808051	29811125	29808051	29811125	+	ENST00000568544.5@MAZ	ENST00000568544.5	protein_coding	29808051,29808570,29810077	29808293,29808741,29811125	Gene ID= ENSG00000103495.13 TPM= 8.5 Transcript Type= protein_coding
chr16	29808146	29811128	29808146	29811128	+	ENST00000568282.1@MAZ	ENST00000568282.1	protein_coding	29808146,29808570,29809540,29810088	29808293,29808741,29809771,29811128	Gene ID= ENSG00000103495.13 TPM= 1.06 Transcript Type= protein_coding
chr16	29820408	29848039	29820408	29848039	+	ENST00000357402.9@MVP	ENST00000357402.9	protein_coding	29820408,29830515,29830878,29833733,29833935,29835704,29836722,29840178,29841596,29841915,29844493,29845863,29846158,29847197,29847762	29820510,29830674,29831073,29833856,29834066,29835798,29836958,29840459,29841840,29842112,29844879,29845979,29846284,29847385,29848039	Gene ID= ENSG00000013364.18 TPM= 90.28 Transcript Type= protein_coding
chr16	29820394	29848039	29820394	29848039	+	ENST00000395353.5@MVP	ENST00000395353.5	protein_coding	29820394,29830474,29830878,29833733,29833935,29835704,29836722,29840178,29841596,29841915,29844493,29845863,29846158,29847197,29847762	29820510,29830674,29831073,29833856,29834066,29835798,29836958,29840459,29841840,29842112,29844879,29845979,29846284,29847385,29848039	Gene ID= ENSG00000013364.18 TPM= 60.54 Transcript Type= protein_coding
chr16	29858357	29863736	29858357	29863736	-	ENST00000219789.10@CDIPT	ENST00000219789.10	protein_coding	29862815,29862586,29861106,29860581,29859442,29858357	29863736,29862720,29861259,29860662,29859523,29859334	Gene ID= ENSG00000103502.13 TPM= 156.67 Transcript Type= protein_coding
chr16	29858358	29863239	29858358	29863239	-	transcript2158.chr16.nic@CDIPT	transcript2158.chr16.nic	protein_coding	29862586,29861106,29860581,29859442,29858358	29863239,29861259,29860662,29859523,29859334	Gene ID= ENSG00000103502.13 TPM= 30.27 Transcript Type= NA
chr16	29871159	29899090	29871159	29899090	-	ENST00000350527.7@SEZ6L2	ENST00000350527.7	protein_coding	29898941,29897853,29896822,29895721,29895259,29888540,29887649,29885586,29879864,29878287,29877271,29876756,29873538,29873240,29872705,29872409,29872187,29871159	29899090,29897984,29896911,29895860,29895460,29888725,29887817,29885749,29880064,29878425,29877467,29876950,29873729,29873431,29872743,29872526,29872283,29871728	Gene ID= ENSG00000174938.14 TPM= 1.06 Transcript Type= protein_coding
chr16	29906336	29927035	29906336	29927035	-	ENST00000568000.5@KCTD13	ENST00000568000.5	protein_coding	29925790,29923190,29911960,29911815,29910978,29906336	29927035,29923359,29912049,29911867,29911173,29907108	Gene ID= ENSG00000174943.9 TPM= 10.62 Transcript Type= protein_coding
chr16	29919634	29921905	29919634	29921905	-	ENST00000567795.2@AC120114.2	ENST00000567795.2	sense_intronic	29919634	29921905	Gene ID= ENSG00000260114.2 TPM= 3.19 Transcript Type= sense_intronic
chr16	29961998	29973047	29961998	29973047	+	transcript2175.chr16.nic@TMEM219	transcript2175.chr16.nic	protein_coding	29961998,29963110,29963400,29968025,29971408,29972950	29962132,29963308,29963589,29968254,29971578,29973047	Gene ID= ENSG00000149932.16 TPM= 61.79 Transcript Type= NA
chr16	29962030	29973052	29962030	29973052	+	ENST00000279396.10@TMEM219	ENST00000279396.10	protein_coding	29962030,29963107,29963400,29968025,29971408,29972950	29962132,29963308,29963589,29968254,29971578,29973052	Gene ID= ENSG00000149932.16 TPM= 96.84 Transcript Type= protein_coding
chr16	29973858	29992261	29973858	29992261	+	transcript2188.chr16.nnic@TAOK2	transcript2188.chr16.nnic	protein_coding	29973858,29977738,29978089,29978252,29978799,29978974,29979195,29979417,29981661,29981859,29982734,29983072,29983503,29985213,29985658,29986265,29990784,29991047	29974648,29977904,29978160,29978353,29978844,29979070,29979308,29979508,29981754,29981940,29982901,29983332,29983664,29985578,29985861,29986504,29990966,29992261	Gene ID= ENSG00000149930.17 TPM= 15.22 Transcript Type= NA
chr16	29973858	29988396	29973858	29988396	+	transcript2189.chr16.nnic@TAOK2	transcript2189.chr16.nnic	protein_coding	29973858,29977738,29978089,29978252,29978799,29978974,29979195,29979417,29981661,29981859,29982734,29983072,29983503,29985213,29985658,29986265,29988359	29974648,29977904,29978160,29978353,29978844,29979070,29979308,29979508,29981754,29981940,29982901,29983332,29983664,29985578,29985861,29986504,29988396	Gene ID= ENSG00000149930.17 TPM= 3.54 Transcript Type= NA
chr16	29973641	29988398	29973641	29988398	+	ENST00000308893.8@TAOK2	ENST00000308893.8	protein_coding	29973641,29977738,29978089,29978252,29978799,29978974,29979195,29979417,29981661,29981859,29982734,29983072,29983503,29985213,29985658,29986265	29974648,29977904,29978160,29978353,29978844,29979070,29979308,29979508,29981754,29981940,29982901,29983332,29983664,29985578,29985861,29988398	Gene ID= ENSG00000149930.17 TPM= 21.59 Transcript Type= protein_coding
chr16	29988266	29989416	29988266	29989416	-	transcript2208.chr16.nnic@NA	transcript2208.chr16.nnic	NA	29988266	29989416	Gene ID= novel_gene_chr16_2209 TPM= 4.25 Transcript Type= NA
chr16	29992321	29996436	29992321	29996436	-	ENST00000279392.7@HIRIP3	ENST00000279392.7	protein_coding	29995541,29995343,29995103,29993906,29993640,29993459,29992321	29996436,29995463,29995217,29994843,29993808,29993557,29993370	Gene ID= ENSG00000149929.15 TPM= 5.31 Transcript Type= protein_coding
chr16	29992996	29995617	29992996	29995617	-	transcript2204.chr16.nic@HIRIP3	transcript2204.chr16.nic	protein_coding	29995541,29995343,29995103,29993906,29993459,29992996	29995617,29995463,29995217,29994843,29993808,29993370	Gene ID= ENSG00000149929.15 TPM= 2.12 Transcript Type= NA
chr16	29992990	29995643	29992990	29995643	-	ENST00000564026.1@HIRIP3	ENST00000564026.1	protein_coding	29995541,29995343,29995103,29993640,29993459,29992990	29995643,29995463,29995217,29993808,29993557,29993370	Gene ID= ENSG00000149929.15 TPM= 4.25 Transcript Type= protein_coding
chr16	29995294	30005793	29995294	30005793	+	ENST00000563197.5@INO80E	ENST00000563197.5	protein_coding	29995294,29996547,29996808,30000758,30000929,30001414,30005221	29996391,29996617,29996860,30000836,30001040,30001530,30005793	Gene ID= ENSG00000169592.14 TPM= 7.44 Transcript Type= protein_coding
chr16	30053090	30070414	30053090	30070414	+	ENST00000338110.9@ALDOA	ENST00000338110.9	protein_coding	30053090,30053464,30054784,30055172,30063729,30064424,30067234,30067450,30068646,30068818,30069306,30069499,30069830,30070117	30053217,30053499,30054927,30055327,30064248,30064505,30067366,30067661,30068700,30068978,30069389,30069673,30070029,30070414	Gene ID= ENSG00000149925.17 TPM= 402.59 Transcript Type= protein_coding
chr16	30065734	30070411	30065734	30070411	+	ENST00000564595.6@ALDOA	ENST00000564595.6	protein_coding	30065734,30066885,30067234,30067450,30068646,30068818,30069306,30069499,30069830,30070117	30065927,30067038,30067366,30067661,30068700,30068978,30069389,30069673,30070029,30070411	Gene ID= ENSG00000149925.17 TPM= 53.65 Transcript Type= protein_coding
chr16	30064497	30070411	30064497	30070411	+	ENST00000412304.6@ALDOA	ENST00000412304.6	protein_coding	30064497,30067234,30067450,30068646,30068818,30069306,30069499,30069830,30070117	30064784,30067366,30067661,30068700,30068978,30069389,30069673,30070029,30070411	Gene ID= ENSG00000149925.17 TPM= 58.43 Transcript Type= protein_coding
chr16	30065148	30070420	30065148	30070420	+	ENST00000564546.5@ALDOA	ENST00000564546.5	protein_coding	30065148,30067234,30067450,30068646,30068818,30069306,30069499,30069830,30070117	30065927,30067366,30067661,30068700,30068978,30069389,30069673,30070029,30070420	Gene ID= ENSG00000149925.17 TPM= 6703.54 Transcript Type= protein_coding
chr16	30064274	30070414	30064274	30070414	+	ENST00000563060.6@ALDOA	ENST00000563060.6	protein_coding	30064274,30067234,30067450,30068646,30068818,30069306,30069499,30069830,30070117	30064505,30067366,30067661,30068700,30068978,30069389,30069673,30070029,30070414	Gene ID= ENSG00000149925.17 TPM= 354.79 Transcript Type= protein_coding
chr16	30065777	30070380	30065777	30070380	+	ENST00000395240.7@ALDOA	ENST00000395240.7	protein_coding	30065777,30067234,30067450,30068646,30068818,30069306,30069499,30069830,30070117	30065927,30067366,30067661,30068700,30068990,30069389,30069673,30070029,30070380	Gene ID= ENSG00000149925.17 TPM= 16.21 Transcript Type= protein_coding
chr16	30069262	30070414	30069262	30070414	+	ENST00000566130.1@ALDOA	ENST00000566130.1	protein_coding	30069262,30069499,30069830,30070117	30069389,30069673,30070029,30070414	Gene ID= ENSG00000149925.17 TPM= 347.79 Transcript Type= retained_intron
chr16	30075990	30085377	30075990	30085377	+	ENST00000279387.11@PPP4C	ENST00000279387.11	protein_coding	30075990,30076315,30081259,30082484,30082746,30083394,30083655,30084666,30084933	30076094,30076475,30081310,30082534,30082847,30083567,30083781,30084855,30085377	Gene ID= ENSG00000149923.13 TPM= 194.19 Transcript Type= protein_coding
chr16	30076023	30085356	30076023	30085356	+	ENST00000627746.2@PPP4C	ENST00000627746.2	protein_coding	30076023,30076315,30082484,30082746,30083394,30083655,30084666,30084933	30076094,30076475,30082534,30082847,30083567,30083781,30084855,30085356	Gene ID= ENSG00000149923.13 TPM= 4.07 Transcript Type= protein_coding
chr16	30076007	30085347	30076007	30085347	+	ENST00000563200.5@PPP4C	ENST00000563200.5	protein_coding	30076007,30076315,30081259,30082484,30082746,30083394,30084666,30084933	30076094,30076475,30081310,30082534,30082847,30083781,30084855,30085347	Gene ID= ENSG00000149923.13 TPM= 2.47 Transcript Type= retained_intron
chr16	30092349	30096244	30092349	30096244	-	ENST00000398838.8@YPEL3	ENST00000398838.8	protein_coding	30096097,30095252,30095103,30094789,30092349	30096244,30095434,30095146,30094897,30092799	Gene ID= ENSG00000090238.11 TPM= 55.23 Transcript Type= protein_coding
chr16	30092314	30096200	30092314	30096200	-	ENST00000398841.5@YPEL3	ENST00000398841.5	protein_coding	30095252,30095103,30094789,30092314	30096200,30095146,30094897,30092799	Gene ID= ENSG00000090238.11 TPM= 24.43 Transcript Type= protein_coding
chr16	30114108	30123262	30114108	30123262	-	transcript2261.chr16.nic@MAPK3	transcript2261.chr16.nic	protein_coding	30123040,30121824,30118349,30118047,30117670,30117154,30116894,30116636,30115595,30114108	30123262,30122006,30118538,30118163,30117784,30117285,30117003,30116790,30115645,30114708	Gene ID= ENSG00000102882.11 TPM= 6.37 Transcript Type= NA
chr16	30114105	30123294	30114105	30123294	-	ENST00000263025.8@MAPK3	ENST00000263025.8	protein_coding	30123040,30121824,30118349,30118047,30117670,30117154,30116894,30116636,30114105	30123294,30122006,30118538,30118163,30117784,30117285,30117003,30116790,30114708	Gene ID= ENSG00000102882.11 TPM= 52.05 Transcript Type= protein_coding
chr16	30118387	30120164	30118387	30120164	+	transcript2266.chr16.nnic@NA	transcript2266.chr16.nnic	NA	30118387	30120164	Gene ID= novel_gene_chr16_2267 TPM= 2.12 Transcript Type= NA
chr16	30183422	30189076	30183422	30189076	+	ENST00000219150.9@CORO1A	ENST00000219150.9	protein_coding	30183422,30185209,30186598,30186816,30187039,30187382,30187725,30187942,30188192,30188361,30188860	30183725,30185407,30186720,30186945,30187223,30187501,30187829,30188087,30188249,30188576,30189076	Gene ID= ENSG00000102879.15 TPM= 15.93 Transcript Type= protein_coding
chr16	30192934	30193666	30192934	30193666	-	ENST00000569282.1@BOLA2B	ENST00000569282.1	protein_coding	30193533,30193358,30192934	30193666,30193417,30193074	Gene ID= ENSG00000169627.7 TPM= 2.12 Transcript Type= protein_coding
chr16	30192935	30194306	30192935	30194306	-	ENST00000305321.4@BOLA2B	ENST00000305321.4	protein_coding	30193533,30193358,30192935	30194306,30193455,30193074	Gene ID= ENSG00000169627.7 TPM= 18.06 Transcript Type= protein_coding
chr16	30193904	30197561	30193904	30197561	+	ENST00000345535.8@SLX1A	ENST00000345535.8	protein_coding	30193904,30194740,30196974,30197270,30197437	30194272,30194791,30197101,30197357,30197561	Gene ID= ENSG00000132207.17 TPM= 1.59 Transcript Type= protein_coding
chr16	30193887	30197531	30193887	30197531	+	ENST00000565081.1@SLX1A	ENST00000565081.1	protein_coding	30193887,30194886,30196974,30197270,30197437	30194791,30195227,30197101,30197357,30197531	Gene ID= ENSG00000132207.17 TPM= 2.12 Transcript Type= retained_intron
chr16	30193917	30197561	30193917	30197561	+	ENST00000251303.10@SLX1A	ENST00000251303.10	protein_coding	30193917,30194740,30194886,30196974,30197270,30197437	30194272,30194791,30195227,30197101,30197357,30197561	Gene ID= ENSG00000132207.17 TPM= 12.21 Transcript Type= protein_coding
chr16	30194433	30204306	30194433	30204306	+	ENST00000565342.5@SLX1A-SULT1A3	ENST00000565342.5	processed_transcript	30194433,30194886,30196974,30197270,30200725,30200981,30201196,30202690,30202912,30203505,30203808	30194791,30195227,30197101,30197357,30200876,30201106,30201293,30202816,30203006,30203685,30204306	Gene ID= ENSG00000213599.10 TPM= 10.62 Transcript Type= processed_transcript
chr16	30204316	30207182	30204316	30207182	-	ENST00000550538.5@AC106782.1	ENST00000550538.5	protein_coding	30207031,30205925,30204961,30204827,30204316	30207182,30206900,30205090,30204890,30204686	Gene ID= ENSG00000258130.7 TPM= 1.06 Transcript Type= protein_coding
chr16	30285023	30335374	30285023	30335374	-	ENST00000411546.3@SMG1P5	ENST00000411546.3	transcribed_unprocessed_pseudogene	30334975,30305790,30305055,30301222,30299869,30298377,30294566,30294115,30293099,30291203,30288561,30286167,30285023	30335374,30305953,30305210,30301358,30299927,30298590,30294691,30294187,30293196,30291375,30288785,30286268,30285457	Gene ID= ENSG00000183604.14 TPM= 19.12 Transcript Type= processed_transcript
chr16	30350766	30355361	30350766	30355361	-	ENST00000305596.7@CD2BP2	ENST00000305596.7	protein_coding	30355212,30354604,30354184,30353901,30353368,30353181,30350766	30355361,30354707,30354322,30354058,30353800,30353287,30353095	Gene ID= ENSG00000169217.8 TPM= 40.89 Transcript Type= protein_coding
chr16	30350773	30355291	30350773	30355291	-	transcript2306.chr16.nic@CD2BP2	transcript2306.chr16.nic	protein_coding	30355212,30354604,30354184,30353901,30353368,30350773	30355291,30354707,30354322,30354058,30353800,30353287	Gene ID= ENSG00000169217.8 TPM= 10.09 Transcript Type= NA
chr16	30357102	30370493	30357102	30370493	-	transcript2300.chr16.nic@TBC1D10B	transcript2300.chr16.nic	protein_coding	30369228,30365495,30365105,30364900,30359727,30359538,30358663,30357102	30370493,30365594,30365212,30365006,30359841,30359603,30358817,30358573	Gene ID= ENSG00000169221.13 TPM= 8.5 Transcript Type= NA
chr16	30357102	30370264	30357102	30370264	-	ENST00000409939.7@TBC1D10B	ENST00000409939.7	protein_coding	30369228,30365495,30365105,30364900,30359727,30359538,30359172,30358663,30357102	30370264,30365594,30365212,30365006,30359841,30359603,30359361,30358817,30358573	Gene ID= ENSG00000169221.13 TPM= 23.37 Transcript Type= protein_coding
chr16	30395112	30400107	30395112	30400107	+	ENST00000613509.1@ZNF48	ENST00000613509.1	protein_coding	30395112,30395780,30397330	30395578,30395873,30400107	Gene ID= ENSG00000180035.12 TPM= 2.12 Transcript Type= protein_coding
chr16	30407297	30419407	30407297	30419407	+	ENST00000319296.9@ZNF771	ENST00000319296.9	protein_coding	30407297,30408045,30417555	30407664,30408194,30419407	Gene ID= ENSG00000179965.11 TPM= 3.19 Transcript Type= protein_coding
chr16	30407629	30431108	30407629	30431108	+	ENST00000566625.2@ZNF771	ENST00000566625.2	protein_coding	30407629,30408045,30428880	30407664,30408194,30431108	Gene ID= ENSG00000179965.11 TPM= 1.06 Transcript Type= protein_coding
chr16	30414948	30416391	30414948	30416391	-	transcript2318.chr16.nnic@NA	transcript2318.chr16.nnic	NA	30414948	30416391	Gene ID= novel_gene_chr16_2319 TPM= 3.19 Transcript Type= NA
chr16	30423619	30430075	30423619	30430075	-	ENST00000319285.4@DCTPP1	ENST00000319285.4	protein_coding	30429880,30429057,30423619	30430075,30429167,30424533	Gene ID= ENSG00000179958.8 TPM= 56.29 Transcript Type= protein_coding
chr16	30424034	30429992	30424034	30429992	-	ENST00000565758.1@DCTPP1	ENST00000565758.1	protein_coding	30429855,30429057,30424034	30429992,30429167,30424533	Gene ID= ENSG00000179958.8 TPM= 2.12 Transcript Type= protein_coding
chr16	30443631	30446181	30443631	30446181	-	ENST00000478753.4@SEPHS2	ENST00000478753.4	protein_coding	30443631	30446181	Gene ID= ENSG00000179918.18 TPM= 106.22 Transcript Type= protein_coding
chr16	30524001	30526589	30524001	30526589	-	ENST00000380412.6@ZNF768	ENST00000380412.6	protein_coding	30526326,30524001	30526589,30526051	Gene ID= ENSG00000169957.9 TPM= 53.11 Transcript Type= protein_coding
chr16	30530367	30535347	30530367	30535347	-	ENST00000252799.3@ZNF747	ENST00000252799.3	protein_coding	30534197,30530367	30535347,30533151	Gene ID= ENSG00000169955.7 TPM= 3.19 Transcript Type= protein_coding
chr16	30530367	30534918	30530367	30534918	-	ENST00000395094.3@ZNF747	ENST00000395094.3	protein_coding	30534197,30530367	30534918,30533148	Gene ID= ENSG00000169955.7 TPM= 2.12 Transcript Type= protein_coding
chr16	30534752	30537144	30534752	30537144	+	ENST00000457283.3@AC002310.1	ENST00000457283.3	antisense_RNA	30534752,30536429	30535480,30537144	Gene ID= ENSG00000235560.3 TPM= 3.19 Transcript Type= antisense_RNA
chr16	30553764	30558498	30553764	30558498	-	ENST00000395091.2@ZNF764	ENST00000395091.2	protein_coding	30557987,30557733,30553764	30558498,30557846,30556107	Gene ID= ENSG00000169951.9 TPM= 4.25 Transcript Type= protein_coding
chr16	30553764	30558263	30553764	30558263	-	ENST00000252797.6@ZNF764	ENST00000252797.6	protein_coding	30557987,30557733,30553764	30558263,30557846,30556110	Gene ID= ENSG00000169951.9 TPM= 5.31 Transcript Type= protein_coding
chr16	30569677	30571724	30569677	30571724	-	transcript2341.chr16.nnic@ZNF688	transcript2341.chr16.nnic	protein_coding	30571434,30569677	30571724,30570436	Gene ID= ENSG00000229809.8 TPM= 16.99 Transcript Type= NA
chr16	30602558	30610379	30602558	30610379	-	ENST00000287461.7@ZNF689	ENST00000287461.7	protein_coding	30609837,30609525,30602558	30610379,30609638,30605447	Gene ID= ENSG00000156853.12 TPM= 2.12 Transcript Type= protein_coding
chr16	30634488	30635323	30634488	30635323	+	transcript2345.chr16.nnic@NA	transcript2345.chr16.nnic	NA	30634488	30635323	Gene ID= novel_gene_chr16_2346 TPM= 2.12 Transcript Type= NA
chr16	30650867	30656440	30650867	30656440	+	ENST00000300835.8@PRR14	ENST00000300835.8	protein_coding	30650867,30651596,30651796,30652721,30652914,30653365,30654230,30654629,30655351,30655502,30655868,30656032	30651127,30651668,30651964,30652842,30653103,30653408,30654339,30655214,30655420,30655593,30655939,30656440	Gene ID= ENSG00000156858.11 TPM= 14.87 Transcript Type= protein_coding
chr16	30664787	30670810	30664787	30670810	+	transcript2351.chr16.nic@FBRS	transcript2351.chr16.nic	protein_coding	30664787,30665035,30665306,30665638,30666512,30666919,30667320,30667542,30668560,30668772,30669069	30664920,30665079,30665401,30665706,30666541,30666990,30667437,30667622,30668643,30668979,30670810	Gene ID= ENSG00000156860.15 TPM= 70.1 Transcript Type= NA
chr16	30697713	30699058	30697713	30699058	-	ENST00000568500.1@AC093249.6	ENST00000568500.1	antisense_RNA	30698136,30697713	30699058,30697931	Gene ID= ENSG00000261840.2 TPM= 1.06 Transcript Type= antisense_RNA
chr16	30704067	30745169	30704067	30745169	+	ENST00000380361.7@AC106886.5	ENST00000380361.7	protein_coding	30704067,30707183,30707572,30709513,30709851,30710754,30710999,30711571,30711835,30712262,30712679,30713208,30713519,30716066,30716293,30720162,30720713,30722122,30722963,30723584,30728966,30729370,30733280,30733602,30733894,30734496,30736200,30736541,30737049,30741741,30743782	30704315,30707368,30707712,30709735,30710128,30710847,30711088,30711744,30712157,30712439,30712815,30713377,30713711,30716202,30716479,30720331,30720978,30722286,30723229,30725082,30729231,30729572,30733449,30733798,30734008,30734615,30736394,30736624,30740707,30741908,30745169	Gene ID= ENSG00000282034.1 TPM= 19.12 Transcript Type= nonsense_mediated_decay
chr16	30718477	30722888	30718477	30722888	-	transcript2364.chr16.nnic@NA	transcript2364.chr16.nnic	NA	30718477	30722888	Gene ID= novel_gene_chr16_2365 TPM= 6.37 Transcript Type= NA
chr16	30748440	30757331	30748440	30757331	+	ENST00000328273.11@PHKG2	ENST00000328273.11	protein_coding	30748440,30748803,30751106,30751549,30753232,30753394,30756182,30756355,30756590,30756804	30748490,30748915,30751281,30751603,30753297,30753557,30756272,30756520,30756715,30757331	Gene ID= ENSG00000156873.15 TPM= 12.75 Transcript Type= protein_coding
chr16	30748443	30757334	30748443	30757334	+	ENST00000563913.5@PHKG2	ENST00000563913.5	protein_coding	30748443,30748803,30751106,30753232,30753394,30756182,30756367,30756590,30756804	30748490,30748915,30751603,30753297,30753557,30756272,30756520,30756715,30757334	Gene ID= ENSG00000156873.15 TPM= 2.12 Transcript Type= retained_intron
chr16	30761997	30776307	30761997	30776307	+	ENST00000324685.10@RNF40	ENST00000324685.10	protein_coding	30761997,30762475,30763118,30763418,30764179,30764938,30765181,30765425,30766163,30766379,30766741,30767894,30768103,30768619,30768838,30769186,30769475,30771833,30772089,30773938	30762360,30762677,30763285,30763559,30764385,30765059,30765327,30765499,30766282,30766558,30766876,30768015,30768530,30768736,30768987,30769398,30769600,30771973,30772190,30776307	Gene ID= ENSG00000103549.21 TPM= 7.44 Transcript Type= protein_coding
chr16	30781464	30783944	30781464	30783944	-	transcript2385.chr16.nnic@NA	transcript2385.chr16.nnic	NA	30781464	30783944	Gene ID= novel_gene_chr16_2386 TPM= 5.31 Transcript Type= NA
chr16	30887795	30894215	30887795	30894215	-	transcript2388.chr16.nnic@BCL7C	transcript2388.chr16.nnic	protein_coding	30893853,30893212,30892840,30892586,30889235,30888860,30887795	30894215,30893290,30892948,30892747,30889277,30888945,30887990	Gene ID= ENSG00000099385.11 TPM= 5.84 Transcript Type= NA
chr16	30833626	30894302	30833626	30894302	-	ENST00000380317.8@BCL7C	ENST00000380317.8	protein_coding	30893853,30893212,30892840,30892586,30888860,30833626	30894302,30893290,30892948,30892747,30888945,30835148	Gene ID= ENSG00000099385.11 TPM= 1.06 Transcript Type= protein_coding
chr16	30887795	30894960	30887795	30894960	-	ENST00000215115.4@BCL7C	ENST00000215115.4	protein_coding	30893853,30893212,30892840,30892586,30888860,30887795	30894960,30893290,30892948,30892747,30888945,30887990	Gene ID= ENSG00000099385.11 TPM= 74.88 Transcript Type= protein_coding
chr16	30896578	30903547	30896578	30903547	+	transcript2403.chr16.nnic@CTF1	transcript2403.chr16.nnic	protein_coding	30896578,30899307,30902078	30896668,30899533,30903547	Gene ID= ENSG00000150281.6 TPM= 18.59 Transcript Type= NA
chr16	30896638	30903547	30896638	30903547	+	ENST00000395019.3@CTF1	ENST00000395019.3	protein_coding	30896638,30899418,30902078	30896668,30899533,30903547	Gene ID= ENSG00000150281.6 TPM= 13.28 Transcript Type= protein_coding
chr16	30915912	30918275	30915912	30918275	-	transcript2409.chr16.nnic@NA	transcript2409.chr16.nnic	NA	30915912	30918275	Gene ID= novel_gene_chr16_2410 TPM= 3.19 Transcript Type= NA
chr16	30919319	30923269	30919319	30923269	-	ENST00000563777.1@FBXL19-AS1	ENST00000563777.1	antisense_RNA	30919319	30923269	Gene ID= ENSG00000260852.1 TPM= 3.19 Transcript Type= antisense_RNA
chr16	30949066	30954938	30949066	30954938	+	ENST00000318663.4@ORAI3	ENST00000318663.4	protein_coding	30949066,30953185	30949517,30954938	Gene ID= ENSG00000175938.6 TPM= 25.49 Transcript Type= protein_coding
chr16	30949152	30956461	30949152	30956461	+	ENST00000562699.1@ORAI3	ENST00000562699.1	protein_coding	30949152,30956200	30949517,30956461	Gene ID= ENSG00000175938.6 TPM= 1.06 Transcript Type= protein_coding
chr16	30957294	30984664	30957294	30984664	+	ENST00000262519.13@SETD1A	ENST00000262519.13	protein_coding	30957294,30958717,30959091,30961267,30963433,30964094,30964612,30965601,30966884,30967501,30969305,30969602,30971378,30979145,30980485,30980739,30981061,30983635,30983850	30957964,30958881,30959186,30961537,30963554,30964323,30965461,30966386,30967060,30967588,30969462,30969689,30971719,30980194,30980657,30980849,30981180,30983772,30984664	Gene ID= ENSG00000099381.17 TPM= 10.62 Transcript Type= protein_coding
chr16	30985211	30989152	30985211	30989152	+	ENST00000297679.9@HSD3B7	ENST00000297679.9	protein_coding	30985211,30985653,30986049,30986423,30986605,30986840,30987768	30985297,30985824,30986204,30986531,30986704,30987002,30989152	Gene ID= ENSG00000099377.13 TPM= 10.62 Transcript Type= protein_coding
chr16	30985221	30989152	30985221	30989152	+	transcript2414.chr16.nnic@NA	transcript2414.chr16.nnic	NA	30985221	30989152	Gene ID= novel_gene_chr16_2415 TPM= 2.12 Transcript Type= NA
chr16	31033606	31040163	31033606	31040163	+	transcript2418.chr16.nic@STX4	transcript2418.chr16.nic	protein_coding	31033606,31034013,31034226,31034462,31034970,31037926,31038114,31038510,31039541,31039912	31033835,31034114,31034325,31034536,31035040,31038034,31038190,31038647,31039818,31040163	Gene ID= ENSG00000103496.14 TPM= 2.47 Transcript Type= NA
chr16	31033527	31040163	31033527	31040163	+	transcript2419.chr16.nic@STX4	transcript2419.chr16.nic	protein_coding	31033527,31034013,31034226,31034970,31037926,31038114,31038510,31039541,31039723,31039912	31033835,31034114,31034536,31035040,31038034,31038190,31038647,31039651,31039818,31040163	Gene ID= ENSG00000103496.14 TPM= 5.66 Transcript Type= NA
chr16	31033491	31040168	31033491	31040168	+	ENST00000313843.7@STX4	ENST00000313843.7	protein_coding	31033491,31034013,31034226,31034462,31034970,31037926,31038114,31038510,31039541,31039723,31039912	31033835,31034114,31034325,31034536,31035040,31038034,31038190,31038647,31039651,31039818,31040168	Gene ID= ENSG00000103496.14 TPM= 41.77 Transcript Type= protein_coding
chr16	31033606	31034853	31033606	31034853	+	ENST00000565483.1@STX4	ENST00000565483.1	protein_coding	31033606,31034013,31034204,31034462	31033835,31034114,31034325,31034853	Gene ID= ENSG00000103496.14 TPM= 5.31 Transcript Type= retained_intron
chr16	31033588	31034877	31033588	31034877	+	ENST00000461455.5@STX4	ENST00000461455.5	protein_coding	31033588,31034013,31034226	31033835,31034114,31034877	Gene ID= ENSG00000103496.14 TPM= 1.06 Transcript Type= retained_intron
chr16	31060850	31074320	31060850	31074320	-	ENST00000300849.4@ZNF668	ENST00000300849.4	protein_coding	31073659,31063813,31060850	31074320,31064481,31062280	Gene ID= ENSG00000167394.12 TPM= 15.93 Transcript Type= protein_coding
chr16	31074422	31084196	31074422	31084196	+	ENST00000300850.5@ZNF646	ENST00000300850.5	protein_coding	31074422,31076246,31082971	31074631,31081701,31084196	Gene ID= ENSG00000167395.10 TPM= 6.37 Transcript Type= protein_coding
chr16	31083439	31085008	31083439	31085008	-	transcript2431.chr16.nic@AC135050.2	transcript2431.chr16.nic	protein_coding	31084780,31084558,31084119,31083439	31085008,31084703,31084335,31083809	Gene ID= ENSG00000255439.6 TPM= 2.12 Transcript Type= NA
chr16	31090842	31094956	31090842	31094956	-	ENST00000354895.4@VKORC1	ENST00000354895.4	protein_coding	31094557,31090842	31094956,31091342	Gene ID= ENSG00000167397.14 TPM= 7.44 Transcript Type= protein_coding
chr16	31090842	31094957	31090842	31094957	-	ENST00000394975.2@VKORC1	ENST00000394975.2	protein_coding	31094557,31093312,31090842	31094957,31093421,31091342	Gene ID= ENSG00000167397.14 TPM= 48.86 Transcript Type= protein_coding
chr16	31090842	31094940	31090842	31094940	-	ENST00000319788.11@VKORC1	ENST00000319788.11	protein_coding	31094557,31093312,31092783,31090842	31094940,31093421,31092864,31091342	Gene ID= ENSG00000167397.14 TPM= 2.12 Transcript Type= protein_coding
chr16	31108294	31112791	31108294	31112791	+	ENST00000219794.10@BCKDK	ENST00000219794.10	protein_coding	31108294,31109047,31109511,31109673,31110077,31110205,31110401,31110688,31111091,31111300,31111869,31112121	31108479,31109418,31109579,31109783,31110124,31110324,31110499,31110761,31111219,31111389,31112027,31112791	Gene ID= ENSG00000103507.13 TPM= 92.41 Transcript Type= protein_coding
chr16	31108294	31112567	31108294	31112567	+	ENST00000394950.7@BCKDK	ENST00000394950.7	protein_coding	31108294,31109047,31109511,31109673,31110077,31110205,31110401,31110688,31111091,31111300,31111869	31108479,31109418,31109579,31109783,31110124,31110324,31110499,31110761,31111219,31111389,31112567	Gene ID= ENSG00000103507.13 TPM= 74.88 Transcript Type= protein_coding
chr16	31108294	31112567	31108294	31112567	+	ENST00000287507.7@BCKDK	ENST00000287507.7	protein_coding	31108294,31109047,31109511,31109673,31110077,31110205,31110401,31110688,31111091,31111869	31108479,31109418,31109579,31109783,31110124,31110324,31110499,31110761,31111219,31112567	Gene ID= ENSG00000103507.13 TPM= 1.59 Transcript Type= protein_coding
chr16	31115754	31131393	31115754	31131393	+	ENST00000543774.6@KAT8	ENST00000543774.6	protein_coding	31115754,31117463,31120186,31120339,31127035,31127189,31128050,31130017,31130267,31130456,31130746,31131195	31115869,31117892,31120260,31120514,31127088,31127353,31128139,31130157,31130360,31130606,31130900,31131393	Gene ID= ENSG00000103510.19 TPM= 24.08 Transcript Type= protein_coding
chr16	31118881	31122041	31118881	31122041	+	transcript2446.chr16.nic@KAT8	transcript2446.chr16.nic	protein_coding	31118881,31120339	31120260,31122041	Gene ID= ENSG00000103510.19 TPM= 6.37 Transcript Type= NA
chr16	31117664	31131389	31117664	31131389	+	ENST00000219797.8@KAT8	ENST00000219797.8	protein_coding	31117664,31120186,31120339,31127035,31127189,31128050,31130017,31130267,31130456,31130746,31131195	31117892,31120260,31120514,31127088,31127353,31128139,31130157,31130360,31130606,31130900,31131389	Gene ID= ENSG00000103510.19 TPM= 16.64 Transcript Type= protein_coding
chr16	31117664	31131359	31117664	31131359	+	ENST00000448516.6@KAT8	ENST00000448516.6	protein_coding	31117664,31120186,31120339,31127035,31127189,31128050,31130017,31130267,31130456,31130746	31117892,31120260,31120514,31127088,31127353,31128139,31130157,31130360,31130606,31131359	Gene ID= ENSG00000103510.19 TPM= 3.9 Transcript Type= protein_coding
chr16	31123041	31124058	31123041	31124058	+	transcript2447.chr16.nnic@NA	transcript2447.chr16.nnic	NA	31123041	31124058	Gene ID= novel_gene_chr16_2448 TPM= 11.68 Transcript Type= NA
chr16	31180110	31194871	31180110	31194871	+	ENST00000254108.11@FUS	ENST00000254108.11	protein_coding	31180110,31182398,31182513,31183858,31184209,31184939,31186802,31188325,31189123,31189665,31190040,31190275,31190742,31190963,31191399	31180227,31182422,31182664,31184002,31184396,31185179,31186836,31188357,31189226,31189794,31190141,31190398,31190842,31191110,31194871	Gene ID= ENSG00000089280.18 TPM= 42.49 Transcript Type= protein_coding
chr16	31180139	31191602	31180139	31191602	+	ENST00000380244.7@FUS	ENST00000380244.7	protein_coding	31180139,31182398,31182513,31183861,31184209,31184939,31186802,31188325,31189123,31189665,31190040,31190275,31190742,31190963,31191399	31180227,31182422,31182664,31184002,31184396,31185179,31186836,31188357,31189226,31189794,31190141,31190398,31190842,31191110,31191602	Gene ID= ENSG00000089280.18 TPM= 26.02 Transcript Type= protein_coding
chr16	31180138	31191602	31180138	31191602	+	ENST00000566605.5@FUS	ENST00000566605.5	protein_coding	31180138,31182398,31182513,31183858,31184209,31184939,31188325,31189123,31189665,31190040,31190275,31190742,31190963,31191399	31180227,31182422,31182664,31184002,31184396,31185179,31188357,31189226,31189794,31190141,31190398,31190842,31191110,31191602	Gene ID= ENSG00000089280.18 TPM= 2.66 Transcript Type= nonsense_mediated_decay
chr16	31180150	31191602	31180150	31191602	+	ENST00000487509.6@FUS	ENST00000487509.6	protein_coding	31180150,31182398,31182513,31183858,31184209,31184939,31189123,31189665,31190040,31190275,31190742,31190963,31191399	31180227,31182422,31182664,31184002,31184396,31188357,31189226,31189794,31190141,31190398,31190842,31191110,31191602	Gene ID= ENSG00000089280.18 TPM= 4.25 Transcript Type= retained_intron
chr16	31201485	31202992	31201485	31202992	-	ENST00000247470.9@PYCARD	ENST00000247470.9	protein_coding	31202417,31202147,31201485	31202992,31202203,31201841	Gene ID= ENSG00000103490.13 TPM= 3.19 Transcript Type= protein_coding
chr16	31201486	31202756	31201486	31202756	-	ENST00000350605.4@PYCARD	ENST00000350605.4	protein_coding	31202417,31201486	31202756,31201841	Gene ID= ENSG00000103490.13 TPM= 1.06 Transcript Type= protein_coding
chr16	31259994	31332892	31259994	31332892	+	ENST00000544665.7@ITGAM	ENST00000544665.7	protein_coding	31259994,31261692,31265395,31265811,31266030,31270954,31271847,31273365,31275549,31276671,31276920,31277967,31297514,31297742,31321241,31321464,31324399,31324651,31324958,31325263,31325500,31326856,31328147,31329228,31329798,31330081,31330308,31330504,31331165,31331636	31260092,31261797,31265498,31265881,31266147,31271084,31271992,31273518,31275699,31276744,31277049,31278109,31297654,31297954,31321371,31321627,31324553,31324782,31325031,31325404,31325622,31326935,31328230,31329303,31329905,31330164,31330421,31330605,31331275,31332892	Gene ID= ENSG00000169896.16 TPM= 6.37 Transcript Type= protein_coding
chr16	31425691	31426666	31425691	31426666	-	transcript2465.chr16.nnic@NA	transcript2465.chr16.nnic	NA	31425691	31426666	Gene ID= novel_gene_chr16_2466 TPM= 2.12 Transcript Type= NA
chr16	31427731	31428428	31427731	31428428	-	ENST00000287490.4@COX6A2	ENST00000287490.4	protein_coding	31428253,31428015,31427731	31428428,31428151,31427857	Gene ID= ENSG00000156885.5 TPM= 1127.13 Transcript Type= protein_coding
chr16	31427776	31428285	31427776	31428285	-	ENST00000565462.2@COX6A2	ENST00000565462.2	protein_coding	31428015,31427776	31428285,31427857	Gene ID= ENSG00000156885.5 TPM= 7.08 Transcript Type= retained_intron
chr16	31450669	31452133	31450669	31452133	-	transcript2483.chr16.nnic@NA	transcript2483.chr16.nnic	NA	31450669	31452133	Gene ID= novel_gene_chr16_2484 TPM= 3.19 Transcript Type= NA
chr16	31453917	31456508	31453917	31456508	+	transcript2477.chr16.nnic@NA	transcript2477.chr16.nnic	NA	31453917	31456508	Gene ID= novel_gene_chr16_2478 TPM= 22.31 Transcript Type= NA
chr16	31456711	31459736	31456711	31459736	-	ENST00000564629.1@AC026471.1	ENST00000564629.1	antisense_RNA	31456711	31459736	Gene ID= ENSG00000260267.1 TPM= 6.37 Transcript Type= antisense_RNA
chr16	31458996	31467164	31458996	31467164	+	ENST00000268314.8@ARMC5	ENST00000268314.8	protein_coding	31458996,31461922,31462131,31464394,31465850,31466079	31459999,31462029,31462917,31464887,31465982,31467164	Gene ID= ENSG00000140691.16 TPM= 25.49 Transcript Type= protein_coding
chr16	31472059	31477958	31472059	31477958	+	ENST00000394863.7@TGFB1I1	ENST00000394863.7	protein_coding	31472059,31473441,31473682,31473835,31474152,31474350,31474563,31476012,31476481,31476862,31477310	31472201,31473556,31473734,31473977,31474239,31474455,31474757,31476185,31476562,31477010,31477958	Gene ID= ENSG00000140682.18 TPM= 111.53 Transcript Type= protein_coding
chr16	31472130	31475325	31472130	31475325	+	transcript2494.chr16.nic@TGFB1I1	transcript2494.chr16.nic	protein_coding	31472130,31473441,31473682,31473835,31474152,31474350,31474563	31472201,31473556,31473734,31473977,31474239,31474455,31475325	Gene ID= ENSG00000140682.18 TPM= 3.19 Transcript Type= NA
chr16	31473426	31477958	31473426	31477958	+	ENST00000567607.5@TGFB1I1	ENST00000567607.5	protein_coding	31473426,31473682,31473835,31474152,31474350,31474563,31476012,31476481,31476862,31477310	31473556,31473734,31473977,31474239,31474455,31474757,31476185,31476562,31477010,31477958	Gene ID= ENSG00000140682.18 TPM= 30.8 Transcript Type= protein_coding
chr16	31473440	31477906	31473440	31477906	+	ENST00000564804.1@TGFB1I1	ENST00000564804.1	protein_coding	31473440,31473682,31473835,31474350,31474563,31476012,31476481,31476862,31477310	31473556,31473734,31473977,31474455,31474757,31476185,31476562,31477010,31477906	Gene ID= ENSG00000140682.18 TPM= 1.06 Transcript Type= nonsense_mediated_decay
chr16	31489489	31508413	31489489	31508413	-	ENST00000327237.6@C16orf58	ENST00000327237.6	protein_coding	31508074,31507764,31500686,31499493,31499302,31496849,31493866,31493603,31493467,31492978,31492197,31492009,31489489	31508413,31507878,31500731,31499525,31499407,31496950,31493936,31493787,31493524,31493048,31492340,31492086,31490932	Gene ID= ENSG00000140688.16 TPM= 30.01 Transcript Type= protein_coding
chr16	31489489	31508406	31489489	31508406	-	transcript2498.chr16.nic@C16orf58	transcript2498.chr16.nic	protein_coding	31508074,31507764,31500686,31499493,31499302,31496849,31493866,31492978,31492197,31492009,31489489	31508406,31507878,31500731,31499525,31499407,31496950,31493936,31493787,31492340,31492086,31490932	Gene ID= ENSG00000140688.16 TPM= 16.73 Transcript Type= NA
chr16	31489489	31508406	31489489	31508406	-	transcript2499.chr16.nnic@C16orf58	transcript2499.chr16.nnic	protein_coding	31508074,31507764,31500686,31499493,31499302,31496849,31493866,31493603,31492197,31492009,31489489	31508406,31507878,31500731,31499525,31499407,31496950,31493936,31493787,31492340,31492086,31490932	Gene ID= ENSG00000140688.16 TPM= 7.7 Transcript Type= NA
chr16	31489489	31508406	31489489	31508406	-	transcript2500.chr16.nic@C16orf58	transcript2500.chr16.nic	protein_coding	31508074,31507764,31500686,31499493,31499302,31496849,31492978,31492197,31492009,31489489	31508406,31507878,31500731,31499525,31499407,31496950,31493936,31492340,31492086,31490932	Gene ID= ENSG00000140688.16 TPM= 9.29 Transcript Type= NA
chr16	31504205	31508388	31504205	31508388	-	transcript2503.chr16.nnic@NA	transcript2503.chr16.nnic	NA	31504205	31508388	Gene ID= novel_gene_chr16_2504 TPM= 2.12 Transcript Type= NA
chr16	31713245	31759886	31713245	31759886	+	ENST00000534277.5@ZNF720	ENST00000534277.5	protein_coding	31713245,31722626,31723258,31753766,31754455	31713448,31722752,31723353,31753900,31759886	Gene ID= ENSG00000197302.10 TPM= 1.06 Transcript Type= nonsense_mediated_decay
chr16	31713234	31761565	31713234	31761565	+	ENST00000316491.13@ZNF720	ENST00000316491.13	protein_coding	31713234,31722626,31723258,31753766,31759357	31713435,31722752,31723353,31753900,31761565	Gene ID= ENSG00000197302.10 TPM= 1.06 Transcript Type= protein_coding
chr16	31873758	31917357	31873758	31917357	+	ENST00000300870.14@ZNF267	ENST00000300870.14	protein_coding	31873758,31884498,31885161,31914476	31873969,31884624,31885256,31917357	Gene ID= ENSG00000185947.14 TPM= 4.25 Transcript Type= protein_coding
chr16	32877469	32881929	32877469	32881929	-	transcript2518.chr16.nnic@SLC6A10P	transcript2518.chr16.nnic	transcribed_unprocessed_pseudogene	32880693,32880478,32879431,32879178,32878825,32877469	32881929,32880601,32879531,32879348,32878996,32877842	Gene ID= ENSG00000214617.9 TPM= 2.12 Transcript Type= NA
chr16	32877474	32878426	32877474	32878426	-	transcript2519.chr16.nnic@NA	transcript2519.chr16.nnic	NA	32877474	32878426	Gene ID= novel_gene_chr16_2520 TPM= 2.12 Transcript Type= NA
chr16	46659677	46689147	46659677	46689147	-	ENST00000568784.6@VPS35	ENST00000568784.6	protein_coding	46688314,46683508,46682079,46681377,46680671,46678943,46677315,46676583,46674564,46674314,46672265,46671705,46668930,46662983,46662243,46661718,46659677	46689147,46683606,46682175,46681500,46680853,46679156,46677398,46676692,46674660,46674462,46672472,46671860,46669052,46663162,46662482,46661861,46660651	Gene ID= ENSG00000069329.16 TPM= 9.56 Transcript Type= nonsense_mediated_decay
chr16	46660192	46689211	46660192	46689211	-	transcript2530.chr16.nic@VPS35	transcript2530.chr16.nic	protein_coding	46689131,46683508,46681377,46680671,46678943,46677315,46676583,46674564,46674314,46672265,46671705,46668930,46662983,46662243,46661718,46660192	46689211,46683606,46681520,46680853,46679156,46677398,46676692,46674660,46674462,46672472,46671860,46669052,46663162,46662482,46661861,46660651	Gene ID= ENSG00000069329.16 TPM= 5.31 Transcript Type= NA
chr16	46689646	46698394	46689646	46698394	+	ENST00000219097.6@ORC6	ENST00000219097.6	protein_coding	46689646,46690991,46692382,46693093,46695562,46696017,46697458	46689770,46691120,46692545,46693182,46695674,46696085,46698394	Gene ID= ENSG00000091651.8 TPM= 4.25 Transcript Type= protein_coding
chr16	46706294	46763299	46706294	46763299	-	transcript2547.chr16.nic@MYLK3	transcript2547.chr16.nic	protein_coding	46763040,46740057,46737711,46732208,46730593,46729594,46729024,46727236,46721123,46712648,46710637,46709539,46706294	46763299,46740147,46738143,46732668,46730698,46729687,46729133,46727377,46721193,46712776,46710789,46709671,46707763	Gene ID= ENSG00000140795.12 TPM= 14.87 Transcript Type= NA
chr16	46715144	46748417	46715144	46748417	-	transcript2555.chr16.nnic@MYLK3	transcript2555.chr16.nnic	protein_coding	46747717,46740057,46737711,46732208,46730593,46729594,46729024,46727236,46721123,46715144	46748417,46740147,46738143,46732668,46730698,46729687,46729133,46727377,46721193,46717313	Gene ID= ENSG00000140795.12 TPM= 6.37 Transcript Type= NA
chr16	46703369	46748309	46703369	46748309	-	ENST00000394809.8@MYLK3	ENST00000394809.8	protein_coding	46747717,46740057,46737711,46732208,46730593,46729594,46729024,46727236,46721123,46712648,46710637,46709539,46703369	46748309,46740147,46738143,46732668,46730698,46729687,46729133,46727377,46721193,46712776,46710789,46709671,46707763	Gene ID= ENSG00000140795.12 TPM= 44.61 Transcript Type= protein_coding
chr16	46713375	46719473	46713375	46719473	-	transcript2567.chr16.nnic@NA	transcript2567.chr16.nnic	NA	46713375	46719473	Gene ID= novel_gene_chr16_2568 TPM= 2.12 Transcript Type= NA
chr16	46746411	46748360	46746411	46748360	-	transcript2565.chr16.nnic@NA	transcript2565.chr16.nnic	NA	46746411	46748360	Gene ID= novel_gene_chr16_2566 TPM= 4.25 Transcript Type= NA
chr16	46760506	46761924	46760506	46761924	+	transcript2563.chr16.nnic@NA	transcript2563.chr16.nnic	NA	46760506	46761924	Gene ID= novel_gene_chr16_2564 TPM= 2.12 Transcript Type= NA
chr16	46796690	46798659	46796690	46798659	-	transcript2569.chr16.nnic@NA	transcript2569.chr16.nnic	NA	46796690	46798659	Gene ID= novel_gene_chr16_2570 TPM= 2.12 Transcript Type= NA
chr16	46802094	46831411	46802094	46831411	-	ENST00000285697.8@C16orf87	ENST00000285697.8	protein_coding	46831084,46824386,46809603,46802094	46831411,46824482,46809785,46803070	Gene ID= ENSG00000155330.9 TPM= 7.44 Transcript Type= protein_coding
chr16	46884378	46931297	46884378	46931297	+	ENST00000340124.8@GPT2	ENST00000340124.8	protein_coding	46884378,46884694,46897648,46900682,46906842,46909684,46916628,46918621,46922242,46924389,46926925,46928907	46884467,46884958,46897737,46900790,46906975,46909927,46916707,46918757,46922416,46924544,46927037,46931297	Gene ID= ENSG00000166123.13 TPM= 8.5 Transcript Type= protein_coding
chr16	46955362	46973788	46955362	46973788	-	ENST00000317089.9@DNAJA2	ENST00000317089.9	protein_coding	46973495,46971896,46971349,46968084,46967513,46964611,46959275,46959003,46955362	46973788,46971955,46971572,46968164,46967646,46964807,46959419,46959130,46957220	Gene ID= ENSG00000069345.11 TPM= 37.18 Transcript Type= protein_coding
chr16	46970764	46971674	46970764	46971674	+	transcript2586.chr16.nnic@NA	transcript2586.chr16.nnic	NA	46970764	46971674	Gene ID= novel_gene_chr16_2587 TPM= 4.25 Transcript Type= NA
chr16	47155380	47461093	47155380	47461093	-	transcript2611.chr16.nnic@ITFG1	transcript2611.chr16.nnic	protein_coding	47460838,47459103,47454013,47452733,47451396,47428804,47376844,47375876,47365788,47313729,47311240,47260545,47258632,47237965,47218868,47162540,47161750,47158873,47155380	47461093,47459175,47454158,47452790,47451470,47428898,47376954,47375940,47365869,47313823,47311412,47260695,47258740,47238008,47218946,47162664,47161832,47158990,47155778	Gene ID= ENSG00000129636.12 TPM= 5.84 Transcript Type= NA
chr16	47154387	47461274	47154387	47461274	-	ENST00000320640.10@ITFG1	ENST00000320640.10	protein_coding	47460838,47459103,47454013,47452733,47451396,47428804,47375876,47365788,47313729,47311240,47260545,47258632,47237965,47218868,47162540,47161750,47158873,47154387	47461274,47459175,47454158,47452790,47451470,47428898,47375940,47365869,47313823,47311412,47260695,47258740,47238008,47218946,47162664,47161832,47158990,47155778	Gene ID= ENSG00000129636.12 TPM= 30.27 Transcript Type= protein_coding
chr16	47461295	47699745	47461295	47699745	+	ENST00000566044.5@PHKB	ENST00000566044.5	protein_coding	47461295,47463882,47497399,47499756,47502991,47511665,47515521,47547433,47580295,47587668,47588905,47593500,47594137,47596373,47610826,47641035,47641599,47648533,47649100,47650544,47650831,47660506,47660657,47661719,47663677,47665942,47669215,47689041,47693378,47696381,47698448,47699229	47461426,47463993,47497488,47499894,47503090,47511772,47515601,47547548,47580358,47587763,47589102,47593557,47594214,47596531,47610920,47641090,47641692,47648616,47649204,47650626,47650921,47660567,47660819,47661800,47663734,47666032,47669417,47689175,47693507,47696488,47698588,47699745	Gene ID= ENSG00000102893.15 TPM= 2.47 Transcript Type= protein_coding
chr16	47461337	47700348	47461337	47700348	+	transcript2595.chr16.nic@PHKB	transcript2595.chr16.nic	protein_coding	47461337,47463899,47497399,47499756,47502991,47511665,47515521,47547433,47580295,47587668,47588905,47593500,47594137,47596373,47610826,47641035,47641599,47648533,47649100,47650544,47650831,47660506,47660657,47661719,47663677,47665942,47669215,47689041,47693378,47696381,47698448,47699229	47461426,47463993,47497488,47499894,47503090,47511772,47515601,47547548,47580358,47587763,47589102,47593557,47594214,47596531,47610920,47641090,47641692,47648616,47649204,47650626,47650921,47660567,47660819,47661800,47663734,47666032,47669417,47689175,47693507,47696488,47698588,47700348	Gene ID= ENSG00000102893.15 TPM= 2.47 Transcript Type= NA
chr16	48244330	48271723	48244330	48271723	+	transcript2657.chr16.nic@LONP2	transcript2657.chr16.nic	protein_coding	48244330,48252131,48256610,48258618,48261424,48262778,48270016	48244621,48252365,48256741,48258740,48261587,48262872,48271723	Gene ID= ENSG00000102910.13 TPM= 7.44 Transcript Type= NA
chr16	48360531	48385450	48360531	48385450	-	ENST00000394725.2@SIAH1	ENST00000394725.2	protein_coding	48385204,48360531	48385450,48362430	Gene ID= ENSG00000196470.11 TPM= 38.24 Transcript Type= protein_coding
chr16	48378283	48380943	48378283	48380943	+	transcript2663.chr16.nnic@NA	transcript2663.chr16.nnic	NA	48378283	48380943	Gene ID= novel_gene_chr16_2664 TPM= 16.99 Transcript Type= NA
chr16	48546097	48610217	48546097	48610217	-	transcript2667.chr16.nic@N4BP1	transcript2667.chr16.nic	protein_coding	48609775,48560754,48553539,48551386,48548007,48546097	48610217,48562444,48553669,48551482,48548114,48546254	Gene ID= ENSG00000102921.7 TPM= 2.12 Transcript Type= NA
chr16	49277917	49281831	49277917	49281831	-	ENST00000219197.10@CBLN1	ENST00000219197.10	protein_coding	49281202,49280923,49277917	49281831,49281042,49279601	Gene ID= ENSG00000102924.11 TPM= 1.06 Transcript Type= protein_coding
chr16	49847018	49847632	49847018	49847632	-	ENST00000615979.1@AC027348.1	ENST00000615979.1	sense_intronic	49847018	49847632	Gene ID= ENSG00000275155.1 TPM= 2.12 Transcript Type= sense_intronic
chr16	50024410	50037088	50024410	50037088	+	ENST00000458059.7@CNEP1R1	ENST00000458059.7	protein_coding	50024410,50025651,50026396,50029725,50033397,50034102,50035417	50025340,50025701,50026467,50029798,50033506,50034156,50037088	Gene ID= ENSG00000205423.11 TPM= 7.7 Transcript Type= protein_coding
chr16	50025256	50037085	50025256	50037085	+	transcript2677.chr16.nnic@CNEP1R1	transcript2677.chr16.nnic	protein_coding	50025256,50026396,50026699,50029725,50033397,50034102,50035417	50025340,50026467,50026876,50029798,50033506,50034156,50037085	Gene ID= ENSG00000205423.11 TPM= 2.39 Transcript Type= NA
chr16	50025206	50037087	50025206	50037087	+	ENST00000427478.6@CNEP1R1	ENST00000427478.6	protein_coding	50025206,50026396,50029725,50033397,50034102,50035417	50025340,50026467,50029798,50033506,50034156,50037087	Gene ID= ENSG00000205423.11 TPM= 20.45 Transcript Type= protein_coding
chr16	50025255	50037085	50025255	50037085	+	ENST00000568890.5@CNEP1R1	ENST00000568890.5	protein_coding	50025255,50026396,50033397,50034102,50035417	50025340,50026467,50033506,50034156,50037085	Gene ID= ENSG00000205423.11 TPM= 8.76 Transcript Type= nonsense_mediated_decay
chr16	50065941	50106387	50065941	50106387	+	ENST00000299192.7@HEATR3	ENST00000299192.7	protein_coding	50065941,50066367,50068780,50070178,50072605,50075571,50078741,50083937,50084134,50084569,50086215,50094705,50100230,50102259,50104939	50066269,50066539,50068867,50070290,50072714,50075711,50079018,50084027,50084291,50084651,50086351,50094793,50100373,50102435,50106387	Gene ID= ENSG00000155393.12 TPM= 1.06 Transcript Type= protein_coding
chr16	50152899	50229526	50152899	50229526	+	transcript2688.chr16.nnic@PAPD5	transcript2688.chr16.nnic	protein_coding	50152899,50153747,50211323,50214221,50216075,50217556,50222306,50223174,50224657,50224891,50225239,50227839,50229152	50153032,50154259,50211446,50214267,50216195,50217663,50222434,50223387,50224783,50224994,50225285,50228003,50229526	Gene ID= ENSG00000121274.12 TPM= 2.12 Transcript Type= NA
chr16	50152918	50231831	50152918	50231831	+	ENST00000436909.7@PAPD5	ENST00000436909.7	protein_coding	50152918,50153747,50211323,50214221,50216075,50217556,50222306,50223174,50224657,50224891,50225098,50227839,50229152	50153032,50154259,50211446,50214267,50216195,50217663,50222434,50223387,50224783,50224994,50225285,50228003,50231831	Gene ID= ENSG00000121274.12 TPM= 1.06 Transcript Type= protein_coding
chr16	50334711	50369023	50334711	50369023	-	transcript2700.chr16.nic@BRD7	transcript2700.chr16.nic	protein_coding	50368726,50368090,50354793,50354425,50350023,50339976,50334711	50369023,50368298,50354922,50354482,50350167,50340086,50334895	Gene ID= ENSG00000166164.15 TPM= 11.68 Transcript Type= NA
chr16	50319030	50368779	50319030	50368779	-	ENST00000394689.2@BRD7	ENST00000394689.2	protein_coding	50368726,50368090,50354793,50354425,50350023,50339976,50334711,50333574,50328669,50326284,50325748,50323587,50321982,50320663,50320248,50319887,50319030	50368779,50368298,50354922,50354482,50350167,50340086,50334895,50333697,50328744,50326391,50325883,50323698,50322038,50320777,50320391,50320030,50319266	Gene ID= ENSG00000166164.15 TPM= 7.44 Transcript Type= protein_coding
chr16	50666300	50681353	50666300	50681353	-	ENST00000300590.7@SNX20	ENST00000300590.7	protein_coding	50681190,50677397,50675770,50666300	50681353,50677535,50675921,50669148	Gene ID= ENSG00000167208.14 TPM= 1.06 Transcript Type= protein_coding
chr16	50671625	50681352	50671625	50681352	-	ENST00000330943.8@SNX20	ENST00000330943.8	protein_coding	50681190,50677397,50675770,50671625	50681352,50677535,50675921,50674074	Gene ID= ENSG00000167208.14 TPM= 2.12 Transcript Type= protein_coding
chr16	50742050	50796881	50742050	50796881	+	ENST00000569418.5@CYLD	ENST00000569418.5	protein_coding	50742050,50742762,50749576,50751604,50754319,50776179,50777825,50779665,50781246,50782325,50784329,50786855,50787786,50791558,50792597,50793546,50794212,50796324	50742124,50742841,50750202,50751906,50754424,50776277,50777941,50780044,50781411,50782466,50784451,50786946,50787852,50791690,50792705,50793664,50794428,50796881	Gene ID= ENSG00000083799.17 TPM= 19.12 Transcript Type= protein_coding
chr16	50742120	50796882	50742120	50796882	+	ENST00000398568.6@CYLD	ENST00000398568.6	protein_coding	50742120,50742762,50749576,50751604,50754319,50776179,50777825,50779665,50781246,50782325,50784329,50786855,50787786,50791558,50792597,50793546,50794212,50796324	50742216,50742841,50750202,50751906,50754424,50776277,50777941,50780044,50781411,50782466,50784451,50786946,50787852,50791690,50792705,50793664,50794428,50796882	Gene ID= ENSG00000083799.17 TPM= 9.56 Transcript Type= protein_coding
chr16	50798887	50800199	50798887	50800199	+	transcript2724.chr16.nnic@NA	transcript2724.chr16.nnic	NA	50798887	50800199	Gene ID= novel_gene_chr16_2725 TPM= 2.12 Transcript Type= NA
chr16	53131007	53226403	53131007	53226403	+	transcript2727.chr16.nic@CHD9	transcript2727.chr16.nic	protein_coding	53131007,53155926,53209482,53222644,53223450,53226366	53131058,53157541,53209813,53222755,53223507,53226403	Gene ID= ENSG00000177200.16 TPM= 2.12 Transcript Type= NA
chr16	53130921	53327451	53130921	53327451	+	ENST00000564845.5@CHD9	ENST00000564845.5	protein_coding	53130921,53155926,53209482,53222644,53226366,53227396,53227548,53228983,53231419,53231647,53235185,53238343,53242840,53245336,53245595,53247293,53249871,53254438,53255600,53262987,53267294,53267927,53273626,53274213,53285596,53286226,53287957,53291725,53292833,53296956,53303720,53306237,53307681,53308686,53314377,53314823,53318212,53321526,53324020	53131058,53157541,53209813,53222755,53226512,53227464,53227603,53229100,53231505,53231784,53235306,53238586,53243016,53245479,53245850,53247503,53250066,53254605,53255779,53263097,53267490,53268126,53273785,53274302,53285699,53286343,53288014,53291767,53293052,53297158,53304625,53306397,53307905,53308854,53314516,53315044,53318340,53321630,53327451	Gene ID= ENSG00000177200.16 TPM= 2.12 Transcript Type= protein_coding
chr16	53099160	53222755	53099160	53222755	+	ENST00000565832.5@CHD9	ENST00000565832.5	protein_coding	53099160,53155926,53209482,53222644	53099268,53157541,53209813,53222755	Gene ID= ENSG00000177200.16 TPM= 3.19 Transcript Type= protein_coding
chr16	53208451	53222755	53208451	53222755	+	ENST00000565442.1@CHD9	ENST00000565442.1	protein_coding	53208451,53209482,53222644	53208709,53209813,53222755	Gene ID= ENSG00000177200.16 TPM= 1.06 Transcript Type= protein_coding
chr16	53131050	53132319	53131050	53132319	+	transcript2743.chr16.nnic@NA	transcript2743.chr16.nnic	NA	53131050	53132319	Gene ID= novel_gene_chr16_2744 TPM= 2.12 Transcript Type= NA
chr16	53434422	53491646	53434422	53491646	+	transcript2750.chr16.nnic@RBL2	transcript2750.chr16.nnic	protein_coding	53434422,53439016,53442658,53447042,53451703,53453452,53453705,53454656,53459451,53461741,53462552,53464226,53465438,53467058,53469916,53470383,53470746,53479154,53479886,53480567,53481671,53490130,53490515	53434796,53439146,53442858,53447106,53451831,53453612,53453769,53454842,53459617,53461850,53462655,53464363,53465602,53467169,53470185,53470663,53470922,53479225,53479991,53480769,53481835,53490301,53491646	Gene ID= ENSG00000103479.15 TPM= 5.66 Transcript Type= NA
chr16	53434420	53491649	53434420	53491649	+	ENST00000262133.10@RBL2	ENST00000262133.10	protein_coding	53434420,53439016,53442658,53447042,53451703,53453452,53453705,53454656,53459451,53461741,53462552,53464226,53465438,53467058,53469916,53470383,53470746,53479154,53479886,53480567,53481671,53490130	53434796,53439146,53442858,53447106,53451831,53453612,53453769,53454842,53459617,53461850,53462655,53464363,53465602,53467169,53470185,53470663,53470922,53479225,53479991,53480769,53481835,53491649	Gene ID= ENSG00000103479.15 TPM= 61.96 Transcript Type= protein_coding
chr16	53434422	53491645	53434422	53491645	+	transcript2757.chr16.nnic@RBL2	transcript2757.chr16.nnic	protein_coding	53434422,53439016,53442658,53447042,53451703,53453452,53453705,53454656,53459451,53461741,53462552,53464226,53465438,53467058,53470383,53470746,53479154,53479886,53490130	53434796,53439146,53442858,53447106,53451831,53453612,53453769,53454842,53459617,53461850,53462655,53464363,53465602,53467169,53470663,53470922,53479225,53479991,53491645	Gene ID= ENSG00000103479.15 TPM= 2.47 Transcript Type= NA
chr16	53491310	53503263	53491310	53503263	-	transcript2768.chr16.nic@AKTIP	transcript2768.chr16.nic	protein_coding	53503147,53500218,53498391,53495262,53495073,53494517,53494339,53494138,53492693,53491310	53503263,53500329,53498596,53495326,53495173,53494605,53494437,53494245,53492753,53492522	Gene ID= ENSG00000166971.16 TPM= 3.19 Transcript Type= NA
chr16	53491379	53503005	53491379	53503005	-	transcript2769.chr16.nic@AKTIP	transcript2769.chr16.nic	protein_coding	53502700,53500218,53498391,53495262,53495073,53494517,53494339,53494138,53492693,53491379	53503005,53500329,53498596,53495326,53495173,53494605,53494437,53494245,53492753,53492522	Gene ID= ENSG00000166971.16 TPM= 4.25 Transcript Type= NA
chr16	53491040	53503251	53491040	53503251	-	ENST00000394657.11@AKTIP	ENST00000394657.11	protein_coding	53503147,53500218,53498391,53495262,53495073,53494517,53494339,53494138,53492693,53491040	53503251,53500329,53498596,53495326,53495173,53494605,53494437,53494245,53492753,53492519	Gene ID= ENSG00000166971.16 TPM= 3.19 Transcript Type= protein_coding
chr16	53492305	53503223	53492305	53503223	-	ENST00000570004.5@AKTIP	ENST00000570004.5	protein_coding	53503118,53500218,53498391,53495262,53495073,53494517,53494339,53494138,53492693,53492305	53503223,53500329,53498596,53495326,53495173,53494605,53494437,53494245,53492753,53492519	Gene ID= ENSG00000166971.16 TPM= 2.12 Transcript Type= protein_coding
chr16	53599912	53703859	53599912	53703859	-	ENST00000621565.4@RPGRIP1L	ENST00000621565.4	protein_coding	53703803,53700639,53696151,53692066,53687863,53686433,53675017,53672870,53671510,53664870,53658772,53658414,53657453,53656472,53652535,53648964,53645625,53641285,53641033,53638310,53637695,53636439,53619025,53610967,53605481,53599912	53703859,53700730,53696295,53692364,53687965,53686576,53675122,53673016,53671583,53665009,53658878,53658464,53657632,53656589,53652987,53649115,53646003,53641475,53641116,53638411,53637854,53636512,53619208,53611051,53605614,53602188	Gene ID= ENSG00000103494.12 TPM= 2.12 Transcript Type= protein_coding
chr16	53695631	53703938	53695631	53703938	-	ENST00000566096.5@RPGRIP1L	ENST00000566096.5	protein_coding	53703803,53700639,53695631	53703938,53700730,53696295	Gene ID= ENSG00000103494.12 TPM= 1.06 Transcript Type= protein_coding
chr16	53703963	54121941	53703963	54121941	+	ENST00000471389.5@FTO	ENST00000471389.5	protein_coding	53703963,53810140,53825864,53844155,53873786,53879844,53888832,53933985,54111762	53704229,53810217,53826491,53844298,53873865,53879987,53888951,53934109,54121941	Gene ID= ENSG00000140718.20 TPM= 2.12 Transcript Type= protein_coding
chr16	53911256	54114463	53911256	54114463	+	ENST00000463855.1@FTO	ENST00000463855.1	protein_coding	53911256,53933985,54111762	53911484,53934109,54114463	Gene ID= ENSG00000140718.20 TPM= 15.93 Transcript Type= protein_coding
chr16	53704149	53708375	53704149	53708375	+	transcript2792.chr16.nnic@NA	transcript2792.chr16.nnic	NA	53704149	53708375	Gene ID= novel_gene_chr16_2793 TPM= 2.12 Transcript Type= NA
chr16	54283304	54286763	54283304	54286763	-	ENST00000329734.3@IRX3	ENST00000329734.3	protein_coding	54285784,54284497,54284246,54283304	54286763,54285613,54284312,54283740	Gene ID= ENSG00000177508.11 TPM= 110.28 Transcript Type= protein_coding
chr16	54283552	54286797	54283552	54286797	-	transcript2814.chr16.nic@IRX3	transcript2814.chr16.nic	protein_coding	54286679,54284497,54284246,54283552	54286797,54285613,54284312,54283740	Gene ID= ENSG00000177508.11 TPM= 17.53 Transcript Type= NA
chr16	54283655	54286797	54283655	54286797	-	transcript2820.chr16.nic@IRX3	transcript2820.chr16.nic	protein_coding	54285784,54284497,54283655	54286797,54285613,54284312	Gene ID= ENSG00000177508.11 TPM= 10.44 Transcript Type= NA
chr16	54918863	54928886	54918863	54928886	-	transcript2826.chr16.nic@CRNDE	transcript2826.chr16.nic	lincRNA	54928770,54925101,54923585,54920298,54918863	54928886,54925213,54923650,54920327,54919209	Gene ID= ENSG00000245694.9 TPM= 4.25 Transcript Type= NA
chr16	54918863	54928551	54918863	54928551	-	ENST00000501177.7@CRNDE	ENST00000501177.7	lincRNA	54928494,54925101,54923585,54920298,54918863	54928551,54925213,54923650,54920327,54919209	Gene ID= ENSG00000245694.9 TPM= 4.25 Transcript Type= lincRNA
chr16	54930862	54934485	54930862	54934485	+	ENST00000394636.8@IRX5	ENST00000394636.8	protein_coding	54930862,54932498,54933077	54931447,54932903,54934485	Gene ID= ENSG00000176842.14 TPM= 13.81 Transcript Type= protein_coding
chr16	55320614	55325240	55320614	55325240	-	transcript2883.chr16.nnic@NA	transcript2883.chr16.nnic	NA	55320614	55325240	Gene ID= novel_gene_chr16_2884 TPM= 4.25 Transcript Type= NA
chr16	55323760	55330760	55323760	55330760	+	ENST00000290552.7@IRX6	ENST00000290552.7	protein_coding	55323760,55326336,55327296,55327586,55328700,55330298	55325136,55326593,55327405,55327893,55329311,55330760	Gene ID= ENSG00000159387.7 TPM= 107.94 Transcript Type= protein_coding
chr16	55324161	55330760	55324161	55330760	+	transcript2868.chr16.nic@IRX6	transcript2868.chr16.nic	protein_coding	55324161,55326336,55327296,55330298	55325136,55326593,55329311,55330760	Gene ID= ENSG00000159387.7 TPM= 28.27 Transcript Type= NA
chr16	55389817	55506237	55389817	55506237	+	transcript2887.chr16.nnic@MMP2	transcript2887.chr16.nnic	protein_coding	55389817,55427757,55482909,55484016,55485299,55485604,55488543,55489651,55491801,55493158,55496926,55498289,55502779,55505339	55390035,55427846,55483135,55484164,55485427,55485777,55488716,55489824,55491956,55493293,55497062,55498448,55502888,55506237	Gene ID= ENSG00000087245.12 TPM= 4.73 Transcript Type= NA
chr16	55479198	55506237	55479198	55506237	+	transcript2890.chr16.nnic@MMP2	transcript2890.chr16.nnic	protein_coding	55479198,55479561,55482909,55484016,55485299,55485604,55488543,55489651,55491801,55493158,55496926,55498289,55502779,55505339	55479267,55479632,55483135,55484164,55485427,55485777,55488716,55489824,55491956,55493293,55497062,55498448,55502888,55506237	Gene ID= ENSG00000087245.12 TPM= 4.73 Transcript Type= NA
chr16	55478971	55506691	55478971	55506691	+	ENST00000219070.8@MMP2	ENST00000219070.8	protein_coding	55478971,55482909,55484016,55485299,55485604,55488543,55489651,55491801,55493158,55496926,55498289,55502779,55505339	55479632,55483135,55484164,55485427,55485777,55488716,55489824,55491956,55493293,55497062,55498448,55502888,55506691	Gene ID= ENSG00000087245.12 TPM= 111.74 Transcript Type= protein_coding
chr16	55389758	55390816	55389758	55390816	-	transcript2904.chr16.nnic@NA	transcript2904.chr16.nnic	NA	55389758	55390816	Gene ID= novel_gene_chr16_2905 TPM= 4.25 Transcript Type= NA
chr16	55390689	55395436	55390689	55395436	+	transcript2900.chr16.nnic@NA	transcript2900.chr16.nnic	NA	55390689	55395436	Gene ID= novel_gene_chr16_2901 TPM= 4.25 Transcript Type= NA
chr16	55411890	55412732	55411890	55412732	+	transcript2902.chr16.nnic@NA	transcript2902.chr16.nnic	NA	55411890	55412732	Gene ID= novel_gene_chr16_2903 TPM= 2.12 Transcript Type= NA
chr16	55508998	55586670	55508998	55586670	+	ENST00000262134.9@LPCAT2	ENST00000262134.9	protein_coding	55508998,55525508,55528377,55529835,55531914,55532824,55534443,55537578,55545735,55549277,55550949,55574631,55579109,55582914	55509352,55525647,55528594,55529947,55531974,55532882,55534477,55537632,55545817,55549402,55551102,55574729,55579244,55586670	Gene ID= ENSG00000087253.12 TPM= 6.37 Transcript Type= protein_coding
chr16	55802853	55833158	55802853	55833158	-	ENST00000360526.7@CES1	ENST00000360526.7	protein_coding	55833004,55828767,55826151,55823550,55821368,55820372,55819535,55816924,55812903,55810927,55810517,55806333,55803529,55802853	55833158,55828974,55826295,55823683,55821521,55820479,55819639,55816962,55813043,55811010,55810664,55806464,55803601,55803232	Gene ID= ENSG00000198848.12 TPM= 26.55 Transcript Type= protein_coding
chr16	56361452	56425538	56361452	56425538	-	ENST00000290649.9@AMFR	ENST00000290649.9	protein_coding	56425073,56414252,56409424,56407964,56405204,56404909,56402985,56401733,56389185,56385919,56369193,56367444,56363921,56361452	56425538,56414344,56409588,56408116,56405244,56405041,56403118,56401843,56389375,56386022,56369327,56367527,56364105,56363056	Gene ID= ENSG00000159461.14 TPM= 117.9 Transcript Type= protein_coding
chr16	56429133	56451375	56429133	56451375	-	ENST00000300291.9@NUDT21	ENST00000300291.9	protein_coding	56451087,56447789,56446626,56439657,56434754,56434331,56429133	56451375,56447989,56446689,56439746,56434829,56434445,56432733	Gene ID= ENSG00000167005.13 TPM= 44.61 Transcript Type= protein_coding
chr16	56438904	56451352	56438904	56451352	-	transcript2925.chr16.nic@NUDT21	transcript2925.chr16.nic	protein_coding	56451087,56447789,56446626,56439657,56438904	56451352,56447989,56446689,56439746,56439496	Gene ID= ENSG00000167005.13 TPM= 3.19 Transcript Type= NA
chr16	56451490	56479100	56451490	56479100	+	ENST00000566157.5@OGFOD1	ENST00000566157.5	protein_coding	56451490,56453263,56458548,56462534,56466152,56466876,56467165,56467905,56470003,56470487,56474828,56475507,56476044	56451766,56453408,56458594,56462634,56466268,56466967,56467293,56468018,56470082,56470791,56474950,56475565,56479100	Gene ID= ENSG00000087263.16 TPM= 4.25 Transcript Type= protein_coding
chr16	56470403	56520064	56470403	56520064	-	transcript2926.chr16.nic@BBS2	transcript2926.chr16.nic	protein_coding	56519746,56514453,56511159,56510859,56509957,56506120,56505950,56502673,56502317,56501353,56500854,56499778,56498437,56497743,56496967,56485590,56484761,56470403	56520064,56514680,56511284,56510921,56510034,56506224,56506036,56502808,56502456,56501497,56501025,56499907,56498568,56497880,56497079,56485738,56484867,56470614	Gene ID= ENSG00000125124.11 TPM= 11.68 Transcript Type= NA
chr16	56484385	56520283	56484385	56520283	-	ENST00000245157.9@BBS2	ENST00000245157.9	protein_coding	56519746,56514453,56511159,56510859,56509957,56506120,56505950,56502673,56502317,56501353,56500854,56499778,56498437,56497743,56496967,56485590,56484385	56520283,56514680,56511284,56510921,56510034,56506224,56506036,56502808,56502456,56501497,56501025,56499907,56498568,56497880,56497079,56485738,56484867	Gene ID= ENSG00000125124.11 TPM= 52.58 Transcript Type= protein_coding
chr16	56484385	56520063	56484385	56520063	-	transcript2933.chr16.nic@BBS2	transcript2933.chr16.nic	protein_coding	56519957,56514453,56511159,56510859,56509957,56506120,56505950,56502673,56502317,56501353,56500854,56499778,56498437,56497743,56496967,56485590,56484385	56520063,56514680,56511284,56510921,56510034,56506224,56506036,56502808,56502456,56501497,56501025,56499907,56498568,56497880,56497079,56485738,56484867	Gene ID= ENSG00000125124.11 TPM= 2.66 Transcript Type= NA
chr16	56608199	56609497	56608199	56609497	+	ENST00000245185.5@MT2A	ENST00000245185.5	protein_coding	56608199,56608992,56609263	56608683,56609057,56609497	Gene ID= ENSG00000125148.6 TPM= 38.24 Transcript Type= protein_coding
chr16	56617476	56618818	56617476	56618818	+	ENST00000565768.1@MT1L	ENST00000565768.1	transcribed_unitary_pseudogene	56617476,56618179,56618589	56617590,56618244,56618818	Gene ID= ENSG00000260549.1 TPM= 2.12 Transcript Type= processed_transcript
chr16	56625475	56627112	56625475	56627112	+	ENST00000306061.10@MT1E	ENST00000306061.10	protein_coding	56625475,56626466,56626880	56625879,56626531,56627112	Gene ID= ENSG00000169715.14 TPM= 5.31 Transcript Type= protein_coding
chr16	56682424	56684196	56682424	56684196	+	ENST00000394485.4@MT1X	ENST00000394485.4	protein_coding	56682424,56683165,56683958	56682568,56683230,56684196	Gene ID= ENSG00000187193.8 TPM= 1.06 Transcript Type= protein_coding
chr16	56730105	56844769	56730105	56844769	+	ENST00000308159.9@NUP93	ENST00000308159.9	protein_coding	56730105,56748234,56758538,56798476,56805504,56818664,56821504,56823707,56828977,56830528,56831842,56832295,56833215,56834128,56834370,56834734,56836601,56837608,56838952,56839521,56841705,56844499	56730211,56748426,56758655,56798538,56805632,56818738,56821593,56823846,56829109,56830685,56832007,56832388,56833406,56834254,56834442,56834778,56836717,56837726,56839069,56839604,56841833,56844769	Gene ID= ENSG00000102900.12 TPM= 44.08 Transcript Type= protein_coding
chr16	56730105	56839216	56730105	56839216	+	transcript2953.chr16.nic@NUP93	transcript2953.chr16.nic	protein_coding	56730105,56748234,56758538,56798476,56805504,56818664,56821504,56823707,56828977,56830528,56831842,56832295,56833215,56834128,56834370,56834734,56836601,56837608,56838952	56730211,56748426,56758655,56798538,56805632,56818738,56821593,56823846,56829109,56830685,56832007,56832388,56833406,56834254,56834442,56834778,56836717,56837726,56839216	Gene ID= ENSG00000102900.12 TPM= 3.72 Transcript Type= NA
chr16	56730105	56805686	56730105	56805686	+	transcript2954.chr16.nic@NUP93	transcript2954.chr16.nic	protein_coding	56730105,56748234,56758538,56798476,56805504	56730211,56748426,56758655,56798538,56805686	Gene ID= ENSG00000102900.12 TPM= 4.25 Transcript Type= NA
chr16	56932048	56944863	56932048	56944863	+	ENST00000439977.6@HERPUD1	ENST00000439977.6	protein_coding	56932048,56935235,56935401,56936687,56939237,56939895,56942132,56943126	56932391,56935312,56935475,56936817,56939359,56940245,56942237,56944863	Gene ID= ENSG00000051108.14 TPM= 207.12 Transcript Type= protein_coding
chr16	56932160	56943886	56932160	56943886	+	ENST00000379792.6@HERPUD1	ENST00000379792.6	protein_coding	56932160,56935235,56936687,56939237,56939895,56942132,56943126	56932391,56935312,56936817,56939359,56940245,56942237,56943886	Gene ID= ENSG00000051108.14 TPM= 8.5 Transcript Type= protein_coding
chr16	56932147	56943881	56932147	56943881	+	ENST00000300302.9@HERPUD1	ENST00000300302.9	protein_coding	56932147,56935235,56935404,56936687,56939237,56939895,56942132,56943126	56932391,56935312,56935475,56936817,56939359,56940245,56942237,56943881	Gene ID= ENSG00000051108.14 TPM= 213.49 Transcript Type= protein_coding
chr16	57058027	57083520	57058027	57083520	+	transcript2965.chr16.nic@NLRC5	transcript2965.chr16.nic	protein_coding	57058027,57058972,57059467,57061448,57061618,57065212,57066534,57067387,57067736,57069836,57070535,57074600,57076819,57077296,57077719,57077943,57079050,57079221,57079546,57081098,57081527,57082417	57058148,57059061,57059532,57061531,57061701,57065298,57066614,57067470,57067828,57069919,57070618,57074683,57076902,57077379,57077802,57078020,57079133,57079292,57079629,57081181,57081610,57083520	Gene ID= ENSG00000140853.15 TPM= 2.12 Transcript Type= NA
chr16	57057391	57083520	57057391	57083520	+	transcript2966.chr16.nic@NLRC5	transcript2966.chr16.nic	protein_coding	57057391,57058972,57061448,57061618,57065212,57066534,57067387,57067736,57069836,57070535,57074600,57076819,57077296,57077719,57077943,57079050,57079221,57079546,57081098,57081527,57082417	57058148,57059532,57061531,57061701,57065298,57066614,57067470,57067828,57069919,57070618,57074683,57076902,57077379,57077802,57078020,57079133,57079292,57079629,57081181,57081610,57083520	Gene ID= ENSG00000140853.15 TPM= 2.12 Transcript Type= NA
chr16	57092537	57148367	57092537	57148367	+	ENST00000290776.12@CPNE2	ENST00000290776.12	protein_coding	57092537,57110708,57113288,57115476,57117496,57119195,57119561,57121093,57121674,57123414,57125860,57127849,57134775,57137149,57146085,57147551	57092790,57110922,57113467,57115550,57117567,57119278,57119650,57121191,57121760,57123473,57125993,57127903,57134826,57137282,57146321,57148367	Gene ID= ENSG00000140848.16 TPM= 20.18 Transcript Type= protein_coding
chr16	57092607	57147966	57092607	57147966	+	ENST00000535318.6@CPNE2	ENST00000535318.6	protein_coding	57092607,57093950,57110708,57113288,57115476,57117496,57119195,57119561,57121093,57121674,57123414,57125860,57127849,57134775,57137149,57146085,57147551	57092790,57094091,57110922,57113467,57115550,57117567,57119278,57119650,57121191,57121760,57123473,57125993,57127903,57134826,57137282,57146321,57147966	Gene ID= ENSG00000140848.16 TPM= 2.12 Transcript Type= protein_coding
chr16	57140896	57144586	57140896	57144586	-	ENST00000623921.1@AC009090.4	ENST00000623921.1	TEC	57140896	57144586	Gene ID= ENSG00000279019.1 TPM= 7.44 Transcript Type= TEC
chr16	57152466	57186064	57152466	57186064	-	ENST00000309137.12@FAM192A	ENST00000309137.12	protein_coding	57185821,57173728,57172776,57172251,57167093,57164001,57152466	57186064,57173869,57172874,57172372,57167226,57164065,57154507	Gene ID= ENSG00000172775.16 TPM= 25.84 Transcript Type= protein_coding
chr16	57153537	57186083	57153537	57186083	-	transcript2983.chr16.nic@FAM192A	transcript2983.chr16.nic	protein_coding	57186031,57173728,57172776,57172251,57167093,57164001,57153537	57186083,57173869,57172874,57172372,57167226,57164065,57154507	Gene ID= ENSG00000172775.16 TPM= 4.6 Transcript Type= NA
chr16	57186291	57240475	57186291	57240475	+	ENST00000394420.8@RSPRY1	ENST00000394420.8	protein_coding	57186291,57204504,57208058,57209075,57212972,57213888,57216107,57216904,57220732,57221272,57227342,57230711,57231167,57235124,57238879	57186451,57205008,57208110,57209187,57213098,57213946,57216173,57217035,57220847,57221415,57227453,57230813,57231319,57235228,57240475	Gene ID= ENSG00000159579.13 TPM= 16.99 Transcript Type= protein_coding
chr16	57186326	57239046	57186326	57239046	+	transcript3001.chr16.nic@RSPRY1	transcript3001.chr16.nic	protein_coding	57186326,57204504,57208058,57209075,57212972,57213888,57216107,57216904,57220732,57221272,57227342,57230711,57231167,57235124,57238879	57186785,57205008,57208110,57209187,57213098,57213946,57216173,57217035,57220847,57221415,57227453,57230813,57231319,57235228,57239046	Gene ID= ENSG00000159579.13 TPM= 4.25 Transcript Type= NA
chr16	57245098	57253635	57245098	57253635	+	ENST00000219204.7@ARL2BP	ENST00000219204.7	protein_coding	57245098,57246080,57248537,57249767,57250411,57252166	57245405,57246141,57248643,57249852,57250507,57253635	Gene ID= ENSG00000102931.7 TPM= 90.28 Transcript Type= protein_coding
chr16	57256097	57284687	57256097	57284687	-	ENST00000219207.9@PLLP	ENST00000219207.9	protein_coding	57284406,57261897,57258462,57256097	57284687,57262070,57258584,57257029	Gene ID= ENSG00000102934.9 TPM= 1.06 Transcript Type= protein_coding
chr16	57254803	57256148	57254803	57256148	+	transcript3016.chr16.nnic@NA	transcript3016.chr16.nnic	NA	57254803	57256148	Gene ID= novel_gene_chr16_3017 TPM= 2.12 Transcript Type= NA
chr16	57372458	57385048	57372458	57385048	+	ENST00000006053.6@CX3CL1	ENST00000006053.6	protein_coding	57372458,57379634,57382030	57372638,57379754,57385048	Gene ID= ENSG00000006210.6 TPM= 28.68 Transcript Type= protein_coding
chr16	57428187	57447419	57428187	57447419	-	ENST00000567518.5@CIAPIN1	ENST00000567518.5	protein_coding	57447342,57440772,57439182,57436656,57434044,57432487,57431151,57430258,57428187	57447419,57440983,57439295,57436732,57434212,57432560,57431266,57430339,57429280	Gene ID= ENSG00000005194.14 TPM= 7.44 Transcript Type= protein_coding
chr16	57428169	57447528	57428169	57447528	-	ENST00000394391.8@CIAPIN1	ENST00000394391.8	protein_coding	57447342,57440772,57439182,57436656,57434044,57432487,57431151,57430258,57428169	57447528,57440983,57439334,57436732,57434212,57432560,57431266,57430339,57429280	Gene ID= ENSG00000005194.14 TPM= 45.67 Transcript Type= protein_coding
chr16	57428554	57447406	57428554	57447406	-	ENST00000569370.5@CIAPIN1	ENST00000569370.5	protein_coding	57447342,57440772,57439182,57436656,57434044,57432487,57430258,57428554	57447406,57440983,57439334,57436732,57434212,57432560,57430339,57429280	Gene ID= ENSG00000005194.14 TPM= 8.5 Transcript Type= protein_coding
chr16	57447437	57461275	57447437	57461275	+	ENST00000262507.10@COQ9	ENST00000262507.10	protein_coding	57447437,57451040,57452801,57456504,57456931,57458246,57459565,57460051,57460589	57447578,57451208,57452936,57456646,57457015,57458350,57459720,57460104,57461275	Gene ID= ENSG00000088682.13 TPM= 518.81 Transcript Type= protein_coding
chr16	57447440	57461270	57447440	57461270	+	transcript3048.chr16.nic@COQ9	transcript3048.chr16.nic	protein_coding	57447440,57451040,57452801,57458246,57459565,57460051,57460589	57447578,57451208,57452936,57458350,57459720,57460104,57461270	Gene ID= ENSG00000088682.13 TPM= 17.65 Transcript Type= NA
chr16	57447494	57461242	57447494	57461242	+	ENST00000567072.5@COQ9	ENST00000567072.5	protein_coding	57447494,57451040,57452801,57456504,57458246,57459565,57460051,57460589	57447578,57451208,57452936,57456626,57458350,57459720,57460104,57461242	Gene ID= ENSG00000088682.13 TPM= 5.31 Transcript Type= protein_coding
chr16	57471922	57486545	57471922	57486545	-	transcript3062.chr16.nic@DOK4	transcript3062.chr16.nic	protein_coding	57486305,57479442,57475850,57475506,57475100,57474793,57473901,57471922	57486545,57479688,57475957,57475620,57475219,57474982,57474039,57473736	Gene ID= ENSG00000125170.10 TPM= 13.81 Transcript Type= NA
chr16	57471958	57486495	57471958	57486495	-	ENST00000340099.8@DOK4	ENST00000340099.8	protein_coding	57486305,57479442,57475850,57475506,57475100,57474793,57473901,57473613,57471958	57486495,57479688,57475957,57475620,57475219,57474982,57474039,57473736,57473495	Gene ID= ENSG00000125170.10 TPM= 19.12 Transcript Type= protein_coding
chr16	57528455	57536801	57528455	57536801	-	transcript3068.chr16.nic@CCDC102A	transcript3068.chr16.nic	protein_coding	57536500,57528455	57536801,57529324	Gene ID= ENSG00000135736.5 TPM= 3.19 Transcript Type= NA
chr16	57512178	57536599	57512178	57536599	-	ENST00000258214.2@CCDC102A	ENST00000258214.2	protein_coding	57536500,57528593,57525901,57521068,57518625,57518068,57516293,57515341,57512178	57536599,57529324,57526127,57521176,57518741,57518277,57516463,57515444,57512870	Gene ID= ENSG00000135736.5 TPM= 8.5 Transcript Type= protein_coding
chr16	57628605	57665025	57628605	57665025	+	ENST00000562558.5@ADGRG1	ENST00000562558.5	protein_coding	57628605,57641591,57650253,57651200,57653203,57653986,57655399,57655876,57656226,57656514,57657373,57659413,57660768,57661697,57663452	57628802,57641708,57650351,57651622,57653335,57654133,57655530,57655992,57656271,57656617,57657491,57659681,57660876,57661965,57665025	Gene ID= ENSG00000205336.11 TPM= 10.97 Transcript Type= protein_coding
chr16	57628306	57665028	57628306	57665028	+	ENST00000562631.5@ADGRG1	ENST00000562631.5	protein_coding	57628306,57650253,57651200,57653203,57653986,57655399,57655876,57656226,57656514,57657373,57659413,57660768,57661697,57663452	57628802,57650351,57651622,57653335,57654133,57655530,57655992,57656271,57656617,57657491,57659681,57660876,57661965,57665028	Gene ID= ENSG00000205336.11 TPM= 7.79 Transcript Type= protein_coding
chr16	57735729	57757250	57735729	57757250	+	transcript3074.chr16.nic@KATNB1	transcript3074.chr16.nic	protein_coding	57735729,57736978,57741687,57744394,57750827,57751261,57751641,57751940,57752530,57752778,57753077,57753389,57753945,57754930,57755119,57755345,57755790,57755992,57756356,57756814	57735855,57737283,57741817,57744511,57750927,57751302,57751724,57752055,57752601,57752928,57753267,57753519,57753995,57754997,57755238,57755494,57755917,57756066,57756472,57757250	Gene ID= ENSG00000140854.12 TPM= 5.84 Transcript Type= NA
chr16	57735730	57757250	57735730	57757250	+	ENST00000379661.7@KATNB1	ENST00000379661.7	protein_coding	57735730,57736978,57741687,57744394,57750827,57751261,57751641,57751940,57752530,57752778,57753077,57753389,57753945,57754930,57755119,57755345,57755841,57755992,57756356,57756814	57735855,57737283,57741817,57744511,57750927,57751302,57751724,57752055,57752601,57752928,57753267,57753519,57753995,57754997,57755238,57755494,57755917,57756066,57756472,57757250	Gene ID= ENSG00000140854.12 TPM= 23.9 Transcript Type= protein_coding
chr16	57758217	57802555	57758217	57802555	-	transcript3093.chr16.nnic@KIFC3	transcript3093.chr16.nnic	protein_coding	57802370,57798072,57794999,57772223,57771543,57771198,57770527,57769808,57769595,57766874,57765459,57764143,57762140,57761413,57761042,57760726,57759728,57759125,57758217	57802555,57798282,57795141,57772288,57771686,57771437,57770700,57769955,57769725,57766985,57765640,57764247,57762270,57761536,57761171,57760955,57759836,57759153,57758909	Gene ID= ENSG00000140859.15 TPM= 20.21 Transcript Type= NA
chr16	57790775	57802610	57790775	57802610	-	transcript3102.chr16.nic@KIFC3	transcript3102.chr16.nic	protein_coding	57802370,57798072,57794999,57790775	57802610,57798282,57795141,57791066	Gene ID= ENSG00000140859.15 TPM= 10.8 Transcript Type= NA
chr16	57758219	57802513	57758219	57802513	-	ENST00000445690.6@KIFC3	ENST00000445690.6	protein_coding	57802370,57798072,57794999,57772223,57771543,57771198,57770527,57769808,57769595,57766874,57765459,57764143,57762140,57761413,57761042,57760726,57760282,57759728,57759125,57758219	57802513,57798282,57795141,57772288,57771686,57771437,57770700,57769955,57769725,57766985,57765640,57764247,57762270,57761536,57761171,57760955,57760416,57759836,57759153,57758909	Gene ID= ENSG00000140859.15 TPM= 164.05 Transcript Type= protein_coding
chr16	57791099	57792890	57791099	57792890	+	transcript3106.chr16.nnic@NA	transcript3106.chr16.nnic	NA	57791099	57792890	Gene ID= novel_gene_chr16_3107 TPM= 43.55 Transcript Type= NA
chr16	57994668	58000678	57994668	58000678	-	transcript3110.chr16.nnic@ZNF319	transcript3110.chr16.nnic	protein_coding	58000401,57999493,57994668	58000678,57999670,57998522	Gene ID= ENSG00000166188.2 TPM= 12.75 Transcript Type= NA
chr16	58001373	58021618	58001373	58021618	+	ENST00000219281.7@USB1	ENST00000219281.7	protein_coding	58001373,58002479,58009929,58014273,58017334,58018972,58020141	58001581,58002645,58010112,58014326,58017439,58019055,58021618	Gene ID= ENSG00000103005.11 TPM= 39.83 Transcript Type= protein_coding
chr16	58001420	58013558	58001420	58013558	+	ENST00000563149.1@USB1	ENST00000563149.1	protein_coding	58001420,58002479,58009929,58012321	58001581,58002645,58010112,58013558	Gene ID= ENSG00000103005.11 TPM= 1.59 Transcript Type= protein_coding
chr16	58025745	58046895	58025745	58046895	+	transcript3116.chr16.nnic@MMP15	transcript3116.chr16.nnic	protein_coding	58025745,58037472,58038266,58039875,58040537,58041617,58042231,58043210,58043512,58045007,58046168	58026512,58037620,58038394,58040182,58040698,58041870,58042369,58043360,58043627,58046108,58046895	Gene ID= ENSG00000102996.4 TPM= 14.87 Transcript Type= NA
chr16	58025566	58046901	58025566	58046901	+	ENST00000219271.3@MMP15	ENST00000219271.3	protein_coding	58025566,58037472,58038266,58039875,58040537,58041617,58042231,58043210,58043512,58045007	58026512,58037620,58038394,58040182,58040698,58041870,58042369,58043360,58043627,58046901	Gene ID= ENSG00000102996.4 TPM= 72.23 Transcript Type= protein_coding
chr16	58113588	58129450	58113588	58129450	-	ENST00000262498.7@CFAP20	ENST00000262498.7	protein_coding	58129032,58116872,58116041,58115269,58114810,58113588	58129450,58116951,58116152,58115457,58114920,58114030	Gene ID= ENSG00000070761.7 TPM= 80.72 Transcript Type= protein_coding
chr16	58157907	58198161	58157907	58198161	-	transcript3127.chr16.nnic@CSNK2A2	transcript3127.chr16.nnic	protein_coding	58197633,58196733,58174451,58168610,58167685,58167207,58166584,58165560,58164054,58157907	58198161,58196844,58174510,58168693,58167795,58167308,58166684,58165708,58164147,58158353	Gene ID= ENSG00000070770.8 TPM= 5.84 Transcript Type= NA
chr16	58157907	58197920	58157907	58197920	-	ENST00000262506.7@CSNK2A2	ENST00000262506.7	protein_coding	58197633,58196733,58186755,58184260,58174451,58168610,58167685,58167207,58166584,58165560,58164054,58157907	58197920,58196844,58186856,58184310,58174510,58168693,58167795,58167308,58166684,58165708,58164147,58158353	Gene ID= ENSG00000070770.8 TPM= 7.97 Transcript Type= protein_coding
chr16	58159551	58167713	58159551	58167713	-	ENST00000563307.1@CSNK2A2	ENST00000563307.1	protein_coding	58167685,58167207,58166584,58165560,58159551	58167713,58167308,58166684,58165708,58164147	Gene ID= ENSG00000070770.8 TPM= 49.92 Transcript Type= protein_coding
chr16	58249936	58283836	58249936	58283836	+	ENST00000219299.8@CCDC113	ENST00000219299.8	protein_coding	58249936,58252727,58253998,58258368,58259854,58262385,58267479,58278482,58279691	58250115,58252853,58254159,58258523,58259934,58262540,58267586,58278637,58283836	Gene ID= ENSG00000103021.9 TPM= 5.31 Transcript Type= protein_coding
chr16	58392394	58406144	58392394	58406144	+	ENST00000318129.5@GINS3	ENST00000318129.5	protein_coding	58392394,58403098,58404499	58392787,58403331,58406144	Gene ID= ENSG00000181938.13 TPM= 5.31 Transcript Type= protein_coding
chr16	58392394	58406036	58392394	58406036	+	ENST00000328514.11@GINS3	ENST00000328514.11	protein_coding	58392394,58404499	58392787,58406036	Gene ID= ENSG00000181938.13 TPM= 1.06 Transcript Type= protein_coding
chr16	58392153	58392807	58392153	58392807	-	ENST00000613275.1@AC009118.2	ENST00000613275.1	antisense_RNA	58392153	58392807	Gene ID= ENSG00000276131.1 TPM= 2.12 Transcript Type= antisense_RNA
chr16	58433190	58434703	58433190	58434703	-	transcript3139.chr16.nnic@NA	transcript3139.chr16.nnic	NA	58433190	58434703	Gene ID= novel_gene_chr16_3140 TPM= 2.12 Transcript Type= NA
chr16	58510711	58513410	58510711	58513410	+	ENST00000563209.1@NDRG4	ENST00000563209.1	protein_coding	58510711	58513410	Gene ID= ENSG00000103034.14 TPM= 87.71 Transcript Type= retained_intron
chr16	58463665	58513628	58463665	58513628	+	ENST00000258187.9@NDRG4	ENST00000258187.9	protein_coding	58463665,58487756,58494964,58503798,58504154,58504359,58504589,58506387,58506558,58506912,58507808,58507948,58508962,58509154,58509301,58511422	58463797,58487850,58495008,58503903,58504274,58504421,58504649,58506473,58506614,58507015,58507864,58507999,58509009,58509189,58509352,58513628	Gene ID= ENSG00000103034.14 TPM= 196.55 Transcript Type= protein_coding
chr16	58464024	58513619	58464024	58513619	+	ENST00000394282.8@NDRG4	ENST00000394282.8	protein_coding	58464024,58487756,58494964,58503798,58504154,58504359,58504589,58506387,58506558,58506912,58507808,58507948,58508962,58509154,58509301,58511422	58464467,58487850,58495008,58503903,58504274,58504421,58504649,58506473,58506614,58507015,58507864,58507999,58509009,58509189,58509352,58513619	Gene ID= ENSG00000103034.14 TPM= 205.05 Transcript Type= protein_coding
chr16	58509149	58513415	58509149	58513415	+	ENST00000566265.1@NDRG4	ENST00000566265.1	protein_coding	58509149,58509301,58511422	58509189,58509352,58513415	Gene ID= ENSG00000103034.14 TPM= 93.27 Transcript Type= retained_intron
chr16	58471188	58473849	58471188	58473849	-	transcript3217.chr16.nnic@NA	transcript3217.chr16.nnic	NA	58471188	58473849	Gene ID= novel_gene_chr16_3218 TPM= 53.11 Transcript Type= NA
chr16	58515488	58519110	58515488	58519110	+	ENST00000219315.8@SETD6	ENST00000219315.8	protein_coding	58515488,58515791,58516202,58516478,58516808,58518051,58518401,58518724	58515564,58516097,58516343,58516672,58516928,58518231,58518543,58519110	Gene ID= ENSG00000103037.11 TPM= 1.06 Transcript Type= protein_coding
chr16	58519951	58629886	58519951	58629886	-	ENST00000317147.9@CNOT1	ENST00000317147.9	protein_coding	58629728,58599236,58588799,58587780,58587345,58587201,58586545,58585338,58583056,58582793,58581345,58580633,58578699,58576463,58575007,58574609,58560212,58558473,58556847,58555784,58555251,58553782,58551589,58551132,58549719,58547566,58547186,58546672,58546321,58545361,58543607,58542428,58542231,58541501,58539768,58538772,58538158,58537891,58536989,58534147,58532232,58531958,58530246,58528475,58525989,58525179,58523370,58521183,58519951	58629886,58599511,58588906,58587878,58587413,58587255,58586748,58585506,58583182,58582903,58581515,58580760,58578939,58576582,58575129,58574760,58560362,58558674,58556993,58555908,58555537,58553860,58551819,58551272,58549898,58547682,58547296,58546749,58546498,58545491,58543903,58542568,58542335,58541620,58539959,58538914,58538266,58538060,58537220,58534395,58532395,58532075,58530347,58528648,58526138,58525359,58523502,58521317,58521036	Gene ID= ENSG00000125107.17 TPM= 8.32 Transcript Type= protein_coding
chr16	58543327	58629838	58543327	58629838	-	ENST00000441024.6@CNOT1	ENST00000441024.6	protein_coding	58629728,58599236,58588799,58587780,58587345,58587201,58586545,58585338,58583056,58582793,58581345,58580633,58578699,58576463,58575007,58574609,58560212,58558473,58556847,58555784,58555251,58553782,58551589,58551132,58549719,58547566,58547186,58546672,58546321,58545361,58543327	58629838,58599511,58588906,58587878,58587413,58587255,58586748,58585506,58583182,58582903,58581515,58580760,58578939,58576582,58575129,58574760,58560362,58558674,58556993,58555908,58555537,58553860,58551819,58551272,58549898,58547682,58547296,58546749,58546498,58545491,58543903	Gene ID= ENSG00000125107.17 TPM= 2.47 Transcript Type= protein_coding
chr16	58520695	58629834	58520695	58629834	-	ENST00000569240.5@CNOT1	ENST00000569240.5	protein_coding	58629728,58599236,58588799,58587780,58587345,58587201,58586545,58585338,58583056,58582793,58581345,58580633,58578699,58576463,58575007,58574609,58560212,58558473,58556862,58555784,58555251,58553782,58551589,58551132,58549719,58547566,58547186,58546672,58546321,58545361,58543607,58542428,58542231,58541501,58539768,58538772,58538158,58537891,58536989,58534147,58532232,58531958,58530246,58528475,58525989,58525179,58523370,58521183,58520695	58629834,58599511,58588906,58587878,58587413,58587255,58586748,58585506,58583182,58582903,58581515,58580760,58578939,58576582,58575129,58574760,58560362,58558674,58556993,58555908,58555537,58553860,58551819,58551272,58549898,58547682,58547296,58546749,58546498,58545491,58543903,58542568,58542335,58541620,58539959,58538914,58538266,58538060,58537220,58534395,58532395,58532075,58530347,58528648,58526138,58525359,58523502,58521317,58521036	Gene ID= ENSG00000125107.17 TPM= 14.69 Transcript Type= protein_coding
chr16	58593354	58596915	58593354	58596915	+	transcript3226.chr16.nnic@NA	transcript3226.chr16.nnic	NA	58593354	58596915	Gene ID= novel_gene_chr16_3227 TPM= 7.44 Transcript Type= NA
chr16	58666372	58684771	58666372	58684771	-	transcript3230.chr16.nic@SLC38A7	transcript3230.chr16.nic	protein_coding	58684717,58683955,58679857,58678696,58678333,58677326,58676289,58675940,58672096,58671045,58670113,58666372	58684771,58684083,58680241,58678894,58678474,58677424,58676346,58676054,58672243,58671244,58670167,58667487	Gene ID= ENSG00000103042.8 TPM= 3.9 Transcript Type= NA
chr16	58665109	58685104	58665109	58685104	-	ENST00000219320.8@SLC38A7	ENST00000219320.8	protein_coding	58684717,58683955,58679857,58678696,58678333,58677326,58676289,58675940,58672096,58671045,58670113,58665109	58685104,58684178,58680241,58678894,58678474,58677424,58676346,58676054,58672243,58671244,58670167,58667487	Gene ID= ENSG00000103042.8 TPM= 30.98 Transcript Type= protein_coding
chr16	58665109	58684723	58665109	58684723	-	ENST00000570101.5@SLC38A7	ENST00000570101.5	protein_coding	58683955,58679857,58678696,58678333,58677326,58676289,58675940,58672096,58671045,58670113,58665109	58684723,58680241,58678894,58678474,58677424,58676346,58676054,58672243,58671244,58670167,58667487	Gene ID= ENSG00000103042.8 TPM= 10.8 Transcript Type= protein_coding
chr16	58707131	58734357	58707131	58734357	-	ENST00000245206.9@GOT2	ENST00000245206.9	protein_coding	58734140,58723746,58722150,58719196,58718527,58718196,58716663,58716014,58709417,58707131	58734357,58723902,58722278,58719255,58718688,58718300,58716813,58716179,58709567,58708293	Gene ID= ENSG00000125166.12 TPM= 909.21 Transcript Type= protein_coding
chr16	63084415	63086963	63084415	63086963	-	transcript3269.chr16.nnic@NA	transcript3269.chr16.nnic	NA	63084415	63086963	Gene ID= novel_gene_chr16_3270 TPM= 2.12 Transcript Type= NA
chr16	63125826	63127790	63125826	63127790	+	transcript3267.chr16.nnic@NA	transcript3267.chr16.nnic	NA	63125826	63127790	Gene ID= novel_gene_chr16_3268 TPM= 3.19 Transcript Type= NA
chr16	64943753	65122198	64943753	65122198	-	ENST00000268603.8@CDH11	ENST00000268603.8	protein_coding	65121880,65053804,65004642,64998562,64992915,64991768,64988157,64982048,64972904,64971931,64971579,64950767,64943753	65122198,65053928,65005041,64998856,64993034,64991935,64988344,64982301,64973040,64972064,64971696,64951018,64948099	Gene ID= ENSG00000140937.13 TPM= 1.06 Transcript Type= protein_coding
chr16	64943753	65122036	64943753	65122036	-	ENST00000394156.7@CDH11	ENST00000394156.7	protein_coding	65121880,65053804,65004642,64998562,64992915,64991768,64988157,64982048,64972904,64971931,64971579,64950767,64948609,64943753	65122036,65053928,65005041,64998856,64993034,64991935,64988344,64982301,64973040,64972064,64971696,64951018,64948787,64948099	Gene ID= ENSG00000140937.13 TPM= 1.06 Transcript Type= protein_coding
chr16	65013972	65015452	65013972	65015452	+	transcript3276.chr16.nnic@NA	transcript3276.chr16.nnic	NA	65013972	65015452	Gene ID= novel_gene_chr16_3277 TPM= 2.12 Transcript Type= NA
chr16	66395019	66405262	66395019	66405262	+	transcript3283.chr16.nnic@CDH5	transcript3283.chr16.nnic	protein_coding	66395019,66397979,66398451,66400771,66402650	66396201,66398101,66398561,66401016,66405262	Gene ID= ENSG00000179776.17 TPM= 44.61 Transcript Type= NA
chr16	66366630	66404786	66366630	66404786	+	ENST00000341529.7@CDH5	ENST00000341529.7	protein_coding	66366630,66379319,66386809,66388324,66389358,66390403,66392136,66396059,66397982,66398456,66400771,66402652	66366758,66379547,66387097,66388440,66389522,66390590,66392383,66396201,66398106,66398561,66401016,66404786	Gene ID= ENSG00000179776.17 TPM= 32.93 Transcript Type= protein_coding
chr16	66395505	66398064	66395505	66398064	-	transcript3286.chr16.nnic@NA	transcript3286.chr16.nnic	NA	66395505	66398064	Gene ID= novel_gene_chr16_3287 TPM= 13.81 Transcript Type= NA
chr16	66408524	66412135	66408524	66412135	+	ENST00000499966.1@LINC00920	ENST00000499966.1	lincRNA	66408524,66410280	66408814,66412135	Gene ID= ENSG00000246898.1 TPM= 1.06 Transcript Type= lincRNA
chr16	66426998	66470616	66426998	66470616	+	transcript3290.chr16.nnic@BEAN1	transcript3290.chr16.nnic	protein_coding	66426998,66437595,66441992,66469602,66470565	66427431,66437701,66442176,66470399,66470616	Gene ID= ENSG00000166546.13 TPM= 2.12 Transcript Type= NA
chr16	66508003	66550412	66508003	66550412	-	ENST00000299697.11@TK2	ENST00000299697.11	protein_coding	66549938,66548978,66541879,66536964,66531380,66528994,66517789,66517136,66513731,66508003	66550412,66549009,66541953,66537017,66531469,66529067,66517877,66517215,66513811,66512066	Gene ID= ENSG00000166548.15 TPM= 7.97 Transcript Type= protein_coding
chr16	66508003	66550412	66508003	66550412	-	ENST00000620035.4@TK2	ENST00000620035.4	protein_coding	66549938,66548978,66541879,66531380,66528994,66517789,66517136,66513731,66508003	66550412,66549009,66541953,66531469,66529067,66517877,66517215,66513811,66512066	Gene ID= ENSG00000166548.15 TPM= 3.72 Transcript Type= protein_coding
chr16	66552567	66566072	66552567	66566072	+	ENST00000264001.8@CKLF	ENST00000264001.8	protein_coding	66552567,66558190,66563122,66565886	66552793,66558348,66563217,66566072	Gene ID= ENSG00000217555.12 TPM= 2.12 Transcript Type= protein_coding
chr16	66552569	66566072	66552569	66566072	+	ENST00000351137.8@CKLF	ENST00000351137.8	protein_coding	66552569,66563122,66565886	66552793,66563217,66566072	Gene ID= ENSG00000217555.12 TPM= 5.31 Transcript Type= protein_coding
chr16	66586909	66588275	66586909	66588275	+	ENST00000532362.1@CMTM2	ENST00000532362.1	protein_coding	66586909,66587919	66587098,66588275	Gene ID= ENSG00000140932.9 TPM= 2.12 Transcript Type= retained_intron
chr16	66604664	66613880	66604664	66613880	+	ENST00000567572.5@CMTM3	ENST00000567572.5	protein_coding	66604664,66608309,66609435,66609883,66612609	66604952,66608464,66609530,66610003,66613880	Gene ID= ENSG00000140931.19 TPM= 11.68 Transcript Type= protein_coding
chr16	66614750	66621775	66614750	66621775	-	ENST00000581487.1@CMTM4	ENST00000581487.1	protein_coding	66614750	66621775	Gene ID= ENSG00000183723.12 TPM= 1.06 Transcript Type= retained_intron
chr16	66720893	66751798	66720893	66751798	-	ENST00000258198.6@DYNC1LI2	ENST00000258198.6	protein_coding	66751485,66751273,66749197,66742438,66736075,66734218,66732339,66730112,66729040,66728201,66727688,66725828,66720893	66751798,66751346,66749313,66742668,66736244,66734311,66732474,66730223,66729099,66728242,66727805,66725944,66723822	Gene ID= ENSG00000135720.12 TPM= 71.16 Transcript Type= protein_coding
chr16	66802880	66830976	66802880	66830976	-	ENST00000379463.6@NAE1	ENST00000379463.6	protein_coding	66830847,66827980,66826677,66826523,66824855,66823529,66823227,66821450,66818528,66817425,66816965,66816581,66813787,66813564,66810697,66810374,66808989,66808521,66805912,66805777,66802880	66830976,66828077,66826780,66826583,66824885,66823600,66823306,66821559,66818637,66817487,66817028,66816672,66813846,66813697,66810772,66810413,66809075,66808613,66806026,66805826,66803118	Gene ID= ENSG00000159593.14 TPM= 5.31 Transcript Type= protein_coding
chr16	66802875	66830997	66802875	66830997	-	ENST00000290810.7@NAE1	ENST00000290810.7	protein_coding	66830847,66826677,66826523,66824855,66823529,66823227,66821450,66818528,66817425,66816965,66816581,66813787,66813564,66810697,66810374,66808989,66808521,66805912,66805777,66802875	66830997,66826780,66826583,66824885,66823600,66823306,66821559,66818637,66817487,66817028,66816672,66813846,66813697,66810772,66810413,66809075,66808613,66806026,66805826,66803118	Gene ID= ENSG00000159593.14 TPM= 28.68 Transcript Type= protein_coding
chr16	66802912	66830955	66802912	66830955	-	ENST00000394074.6@NAE1	ENST00000394074.6	protein_coding	66830847,66826523,66824855,66823529,66823227,66821450,66818528,66817425,66816965,66816581,66813787,66813564,66810697,66810374,66808989,66808521,66805912,66805777,66802912	66830955,66826583,66824885,66823600,66823306,66821559,66818637,66817487,66817028,66816672,66813846,66813697,66810772,66810413,66809075,66808613,66806026,66805826,66803118	Gene ID= ENSG00000159593.14 TPM= 2.12 Transcript Type= protein_coding
chr16	66880361	66891096	66880361	66891096	+	ENST00000311765.3@PDP2	ENST00000311765.3	protein_coding	66880361,66884231	66880640,66891096	Gene ID= ENSG00000172840.6 TPM= 2.12 Transcript Type= protein_coding
chr16	66921685	66925644	66921685	66925644	-	ENST00000299759.10@RRAD	ENST00000299759.10	protein_coding	66925409,66924810,66923846,66923516,66921685	66925644,66925194,66923919,66923720,66922353	Gene ID= ENSG00000166592.11 TPM= 1199 Transcript Type= protein_coding
chr16	66932055	66934400	66932055	66934400	-	ENST00000422424.6@FAM96B	ENST00000422424.6	protein_coding	66934223,66933987,66933614,66932780,66932055	66934400,66934066,66933739,66932825,66932300	Gene ID= ENSG00000166595.11 TPM= 145.52 Transcript Type= protein_coding
chr16	66934494	66944306	66934494	66944306	+	transcript3365.chr16.nic@CES2	transcript3365.chr16.nic	protein_coding	66934494,66938037,66939217,66940222,66940437,66941124,66941506,66941768,66942105,66942648,66943299,66943839	66935875,66938241,66939358,66940355,66940695,66941222,66941646,66941848,66942249,66942785,66943371,66944306	Gene ID= ENSG00000172831.11 TPM= 5.31 Transcript Type= NA
chr16	66934486	66944430	66934486	66944430	+	transcript3367.chr16.nnic@CES2	transcript3367.chr16.nnic	protein_coding	66934486,66938037,66939217,66940222,66940437,66941124,66941506,66942105,66942648,66943299,66943839	66935711,66938241,66939358,66940355,66940695,66941222,66941646,66942249,66942785,66943371,66944430	Gene ID= ENSG00000172831.11 TPM= 5.31 Transcript Type= NA
chr16	66934471	66944306	66934471	66944306	+	ENST00000568470.5@CES2	ENST00000568470.5	protein_coding	66934471,66938037,66939217,66940222,66940437,66941124,66941506,66941768,66942105,66942648,66943299,66943839	66935976,66938241,66939358,66940355,66940695,66941222,66941646,66941848,66942249,66942785,66943371,66944306	Gene ID= ENSG00000172831.11 TPM= 15.93 Transcript Type= nonsense_mediated_decay
chr16	67000352	67009735	67000352	67009735	+	transcript3402.chr16.nic@CES4A	transcript3402.chr16.nic	protein_coding	67000352,67000857,67001308,67003070,67003256,67003515,67004084,67004793,67005240,67006391,67006745,67008974	67000779,67001002,67001461,67003174,67003360,67003553,67004224,67004873,67005393,67006519,67006817,67009735	Gene ID= ENSG00000172824.14 TPM= 2.12 Transcript Type= NA
chr16	67000552	67009752	67000552	67009752	+	ENST00000535543.5@CES4A	ENST00000535543.5	protein_coding	67000552,67000857,67001308,67003070,67003256,67003515,67004084,67004793,67005240,67006391,67006745,67008974	67000779,67001046,67001461,67003174,67003360,67003553,67004224,67004873,67005393,67006519,67006817,67009752	Gene ID= ENSG00000172824.14 TPM= 2.12 Transcript Type= nonsense_mediated_decay
chr16	67029331	67101022	67029331	67101022	+	transcript3420.chr16.nic@CBFB	transcript3420.chr16.nic	protein_coding	67029331,67029727,67066682,67082213,67098710	67029485,67029813,67066798,67082308,67101022	Gene ID= ENSG00000067955.13 TPM= 2.39 Transcript Type= NA
chr16	67029098	67101058	67029098	67101058	+	transcript3421.chr16.nic@CBFB	transcript3421.chr16.nic	protein_coding	67029098,67029727,67066682,67082213,67098710	67029485,67029813,67066798,67082339,67101058	Gene ID= ENSG00000067955.13 TPM= 4.51 Transcript Type= NA
chr16	67029147	67101058	67029147	67101058	+	ENST00000290858.10@CBFB	ENST00000290858.10	protein_coding	67029147,67029727,67036639,67066682,67082213,67098710	67029485,67029813,67036755,67066798,67082339,67101058	Gene ID= ENSG00000067955.13 TPM= 44.88 Transcript Type= protein_coding
chr16	67029245	67101022	67029245	67101022	+	ENST00000412916.6@CBFB	ENST00000412916.6	protein_coding	67029245,67029727,67036639,67066682,67082213,67098710	67029485,67029813,67036755,67066798,67082308,67101022	Gene ID= ENSG00000067955.13 TPM= 7.7 Transcript Type= protein_coding
chr16	67148105	67151214	67148105	67151214	-	ENST00000449549.3@B3GNT9	ENST00000449549.3	protein_coding	67150865,67148105	67151214,67150671	Gene ID= ENSG00000237172.3 TPM= 10.62 Transcript Type= protein_coding
chr16	67154180	67160298	67154180	67160298	-	ENST00000345057.8@TRADD	ENST00000345057.8	protein_coding	67159838,67156510,67155377,67155096,67154180	67160298,67156668,67155654,67155294,67154959	Gene ID= ENSG00000102871.15 TPM= 27.09 Transcript Type= protein_coding
chr16	67154199	67159911	67154199	67159911	-	transcript3458.chr16.nic@TRADD	transcript3458.chr16.nic	protein_coding	67159838,67156510,67155377,67155096,67154199	67159911,67156668,67156199,67155294,67154959	Gene ID= ENSG00000102871.15 TPM= 5.84 Transcript Type= NA
chr16	67159915	67164173	67159915	67164173	+	transcript3461.chr16.nnic@FBXL8	transcript3461.chr16.nnic	protein_coding	67159915,67161735,67162808	67160056,67161937,67164173	Gene ID= ENSG00000135722.8 TPM= 2.12 Transcript Type= NA
chr16	67159931	67164176	67159931	67164176	+	ENST00000258200.7@FBXL8	ENST00000258200.7	protein_coding	67159931,67161735,67162848	67160056,67161937,67164176	Gene ID= ENSG00000135722.8 TPM= 9.56 Transcript Type= protein_coding
chr16	67159961	67164174	67159961	67164174	+	ENST00000519917.5@FBXL8	ENST00000519917.5	protein_coding	67159961,67161735,67162848,67164019	67160056,67161937,67163852,67164174	Gene ID= ENSG00000135722.8 TPM= 1.06 Transcript Type= protein_coding
chr16	67164704	67169945	67164704	67169945	+	transcript3442.chr16.nic@HSF4	transcript3442.chr16.nic	protein_coding	67164704,67165522,67165719,67165946,67166558,67167120,67167475,67167824,67168831,67169036,67169279,67169631	67164934,67165630,67165846,67166369,67166622,67167222,67167599,67167947,67168936,67169101,67169348,67169945	Gene ID= ENSG00000102878.16 TPM= 4.16 Transcript Type= NA
chr16	67164704	67169945	67164704	67169945	+	transcript3443.chr16.nic@HSF4	transcript3443.chr16.nic	protein_coding	67164704,67165522,67165719,67165946,67166558,67167120,67167475,67167720,67168831,67169036,67169279,67169631	67164934,67165630,67165846,67166395,67166622,67167222,67167599,67167947,67168936,67169101,67169348,67169945	Gene ID= ENSG00000102878.16 TPM= 3.1 Transcript Type= NA
chr16	67164744	67169910	67164744	67169910	+	ENST00000434833.6@HSF4	ENST00000434833.6	protein_coding	67164744,67165522,67165719,67165946,67166320,67166558,67167120,67167475,67167824,67168831,67169036,67169279,67169631	67164934,67165630,67165846,67166070,67166395,67166622,67167222,67167599,67167947,67168936,67169101,67169348,67169910	Gene ID= ENSG00000102878.16 TPM= 1.33 Transcript Type= nonsense_mediated_decay
chr16	67170497	67175735	67170497	67175735	+	ENST00000268605.11@NOL3	ENST00000268605.11	protein_coding	67170497,67174162,67174621,67175047	67170574,67174464,67174944,67175735	Gene ID= ENSG00000140939.14 TPM= 32.75 Transcript Type= protein_coding
chr16	67172587	67175735	67172587	67175735	+	transcript3481.chr16.nic@NOL3	transcript3481.chr16.nic	protein_coding	67172587,67174162,67174621,67175047	67174046,67174464,67174944,67175735	Gene ID= ENSG00000140939.14 TPM= 77.36 Transcript Type= NA
chr16	67173951	67175199	67173951	67175199	+	ENST00000566871.5@NOL3	ENST00000566871.5	protein_coding	67173951,67174162,67174621,67175047	67174046,67174340,67174944,67175199	Gene ID= ENSG00000140939.14 TPM= 12.75 Transcript Type= protein_coding
chr16	67174002	67175735	67174002	67175735	+	ENST00000568146.1@NOL3	ENST00000568146.1	protein_coding	67174002,67174162,67174621,67175047	67174046,67174454,67174944,67175735	Gene ID= ENSG00000140939.14 TPM= 26.9 Transcript Type= protein_coding
chr16	67183787	67185811	67183787	67185811	+	transcript3485.chr16.nnic@NA	transcript3485.chr16.nnic	NA	67183787	67185811	Gene ID= novel_gene_chr16_3486 TPM= 2.66 Transcript Type= NA
chr16	67184366	67190204	67184366	67190204	-	ENST00000314586.10@EXOC3L1	ENST00000314586.10	protein_coding	67189971,67189631,67189020,67188721,67187225,67187021,67186759,67186557,67186237,67185361,67185136,67184902,67184686,67184366	67190204,67189683,67189180,67188940,67187837,67187138,67186884,67186657,67186347,67185490,67185258,67185057,67184810,67184604	Gene ID= ENSG00000179044.15 TPM= 4.25 Transcript Type= protein_coding
chr16	67184379	67186422	67184379	67186422	-	transcript3484.chr16.nic@EXOC3L1	transcript3484.chr16.nic	protein_coding	67185361,67184379	67186422,67185258	Gene ID= ENSG00000179044.15 TPM= 2.66 Transcript Type= NA
chr16	67192180	67198918	67192180	67198918	+	transcript3492.chr16.nic@E2F4	transcript3492.chr16.nic	protein_coding	67192180,67192761,67193472,67194398,67194686,67195782,67197599,67197867,67198008	67192362,67193170,67193515,67194459,67194980,67196006,67197646,67197911,67198918	Gene ID= ENSG00000205250.8 TPM= 12.03 Transcript Type= NA
chr16	67192169	67198918	67192169	67198918	+	ENST00000379378.7@E2F4	ENST00000379378.7	protein_coding	67192169,67192761,67193009,67193472,67194398,67194686,67195782,67197599,67197867,67198008	67192362,67192870,67193170,67193515,67194459,67194980,67196006,67197646,67197911,67198918	Gene ID= ENSG00000205250.8 TPM= 75.76 Transcript Type= protein_coding
chr16	67192185	67198917	67192185	67198917	+	ENST00000567007.5@E2F4	ENST00000567007.5	protein_coding	67192185,67193472,67194398,67194686,67195782,67197599,67197867,67198008	67193170,67193515,67194459,67194980,67196006,67197646,67197911,67198917	Gene ID= ENSG00000205250.8 TPM= 7.79 Transcript Type= retained_intron
chr16	67227113	67229278	67227113	67229278	+	ENST00000304800.13@TMEM208	ENST00000304800.13	protein_coding	67227113,67227836,67228355,67228495,67228797,67228976	67227224,67227931,67228414,67228631,67228881,67229278	Gene ID= ENSG00000168701.18 TPM= 12.75 Transcript Type= protein_coding
chr16	67229387	67230196	67229387	67230196	-	ENST00000569085.1@FHOD1	ENST00000569085.1	protein_coding	67230066,67229387	67230196,67229990	Gene ID= ENSG00000135723.13 TPM= 6.37 Transcript Type= retained_intron
chr16	67389809	67393535	67389809	67393535	-	ENST00000393957.6@TPPP3	ENST00000393957.6	protein_coding	67393380,67390924,67390479,67389809	67393535,67391117,67390632,67390362	Gene ID= ENSG00000159713.10 TPM= 5.31 Transcript Type= protein_coding
chr16	67389825	67393518	67389825	67393518	-	ENST00000290942.9@TPPP3	ENST00000290942.9	protein_coding	67393380,67392947,67390924,67390479,67389825	67393518,67393037,67391117,67390632,67390362	Gene ID= ENSG00000159713.10 TPM= 1.06 Transcript Type= protein_coding
chr16	67438019	67481237	67438019	67481237	-	ENST00000290949.7@ATP6V0D1	ENST00000290949.7	protein_coding	67480957,67453544,67444528,67443099,67439274,67438971,67438793,67438019	67481237,67453715,67444706,67443178,67439351,67439147,67438870,67438689	Gene ID= ENSG00000159720.11 TPM= 153.48 Transcript Type= protein_coding
chr16	67481384	67484669	67481384	67484669	+	ENST00000602596.1@AC009061.2	ENST00000602596.1	antisense_RNA	67481384,67484110	67481519,67484669	Gene ID= ENSG00000270049.2 TPM= 1.06 Transcript Type= antisense_RNA
chr16	67517950	67528675	67517950	67528675	-	ENST00000621378.1@AC027682.6	ENST00000621378.1	antisense_RNA	67528317,67517950	67528675,67518385	Gene ID= ENSG00000276075.1 TPM= 5.31 Transcript Type= antisense_RNA
chr16	67528870	67546786	67528870	67546786	+	ENST00000042381.8@RIPOR1	ENST00000042381.8	protein_coding	67528870,67538424,67538672,67538990,67539728,67539846,67540053,67540300,67540458,67540579,67541430,67541653,67541867,67543348,67544299,67544695,67544956,67545376,67545664,67545949,67546141,67546366	67528914,67538550,67538824,67539068,67539751,67539899,67540205,67540363,67540501,67540704,67541578,67541782,67543264,67543469,67544431,67544830,67545117,67545534,67545860,67546032,67546231,67546786	Gene ID= ENSG00000039523.19 TPM= 42.49 Transcript Type= protein_coding
chr16	67537454	67546788	67537454	67546788	+	ENST00000428437.6@RIPOR1	ENST00000428437.6	protein_coding	67537454,67538424,67538672,67538990,67539728,67539846,67540053,67540300,67540458,67540579,67541430,67541653,67541867,67543348,67544299,67544695,67544956,67545376,67545664,67545949,67546141,67546366	67537597,67538550,67538824,67539068,67539751,67539899,67540205,67540363,67540501,67540704,67541578,67541782,67543264,67543469,67544431,67544830,67545117,67545534,67545860,67546032,67546231,67546788	Gene ID= ENSG00000039523.19 TPM= 38.24 Transcript Type= protein_coding
chr16	67528805	67532477	67528805	67532477	+	transcript3529.chr16.nnic@NA	transcript3529.chr16.nnic	NA	67528805	67532477	Gene ID= novel_gene_chr16_3530 TPM= 3.19 Transcript Type= NA
chr16	67534829	67537295	67534829	67537295	-	transcript3531.chr16.nnic@NA	transcript3531.chr16.nnic	NA	67534829	67537295	Gene ID= novel_gene_chr16_3532 TPM= 44.61 Transcript Type= NA
chr16	67562407	67639183	67562407	67639183	+	ENST00000264010.8@CTCF	ENST00000264010.8	protein_coding	67562407,67571148,67610824,67611951,67616745,67620697,67621442,67626555,67628370,67629398,67636690,67637688	67562724,67571264,67611613,67612121,67616878,67620817,67621591,67626715,67628552,67629533,67636851,67639183	Gene ID= ENSG00000102974.14 TPM= 26.55 Transcript Type= protein_coding
chr16	67657513	67660815	67657513	67660815	-	ENST00000620338.4@ACD	ENST00000620338.4	protein_coding	67660122,67659903,67659702,67659537,67659375,67659229,67658928,67658720,67658555,67657986,67657762,67657513	67660815,67660045,67659795,67659613,67659419,67659263,67659079,67658816,67658641,67658362,67657853,67657684	Gene ID= ENSG00000102977.13 TPM= 10.62 Transcript Type= protein_coding
chr16	67660948	67662778	67660948	67662778	+	ENST00000458121.6@PARD6A	ENST00000458121.6	protein_coding	67660948,67661455,67661896	67661101,67661677,67662778	Gene ID= ENSG00000102981.9 TPM= 9.56 Transcript Type= protein_coding
chr16	67660959	67662774	67660959	67662774	+	ENST00000219255.3@PARD6A	ENST00000219255.3	protein_coding	67660959,67661455,67661893	67661101,67661677,67662774	Gene ID= ENSG00000102981.9 TPM= 1.06 Transcript Type= protein_coding
chr16	67662946	67666766	67662946	67666766	-	transcript3544.chr16.nnic@ENKD1	transcript3544.chr16.nnic	protein_coding	67666696,67666358,67666071,67664996,67663937,67663657,67663420,67662946	67666766,67666371,67666265,67665168,67664062,67663820,67663556,67663321	Gene ID= ENSG00000124074.11 TPM= 3.72 Transcript Type= NA
chr16	67662945	67666764	67662945	67666764	-	ENST00000243878.8@ENKD1	ENST00000243878.8	protein_coding	67666358,67666071,67664996,67663937,67663657,67663420,67662945	67666764,67666265,67665168,67664062,67663820,67663556,67663321	Gene ID= ENSG00000124074.11 TPM= 12.21 Transcript Type= protein_coding
chr16	67666816	67668758	67666816	67668758	+	ENST00000403458.8@C16orf86	ENST00000403458.8	protein_coding	67666816,67667296,67667878,67668200	67667072,67667525,67668098,67668758	Gene ID= ENSG00000159761.14 TPM= 4.6 Transcript Type= protein_coding
chr16	67666817	67668755	67666817	67668755	+	transcript3549.chr16.nic@C16orf86	transcript3549.chr16.nic	protein_coding	67666817,67667296,67667878	67667072,67667525,67668755	Gene ID= ENSG00000159761.14 TPM= 2.47 Transcript Type= NA
chr16	67666816	67668757	67666816	67668757	+	ENST00000459925.1@C16orf86	ENST00000459925.1	protein_coding	67666816,67667296	67667072,67668757	Gene ID= ENSG00000159761.14 TPM= 1.41 Transcript Type= retained_intron
chr16	67674533	67719421	67674533	67719421	-	ENST00000268797.11@GFOD2	ENST00000268797.11	protein_coding	67719163,67685457,67674533	67719421,67685802,67676053	Gene ID= ENSG00000141098.12 TPM= 7.44 Transcript Type= protein_coding
chr16	67674534	67677484	67674534	67677484	-	ENST00000602522.1@GFOD2	ENST00000602522.1	protein_coding	67674534	67677484	Gene ID= ENSG00000141098.12 TPM= 2.12 Transcript Type= retained_intron
chr16	67680716	67682513	67680716	67682513	-	transcript3553.chr16.nnic@NA	transcript3553.chr16.nnic	NA	67680716	67682513	Gene ID= novel_gene_chr16_3554 TPM= 3.19 Transcript Type= NA
chr16	67723066	67806652	67723066	67806652	-	ENST00000317506.7@RANBP10	ENST00000317506.7	protein_coding	67806302,67805428,67772034,67744288,67738013,67734858,67731472,67729938,67729680,67729280,67728390,67727751,67727327,67723066	67806652,67805539,67772086,67744455,67738035,67735042,67731584,67730046,67729828,67729484,67728511,67727896,67727438,67726558	Gene ID= ENSG00000141084.10 TPM= 15.93 Transcript Type= protein_coding
chr16	67768614	67769460	67768614	67769460	+	transcript3561.chr16.nnic@NA	transcript3561.chr16.nnic	NA	67768614	67769460	Gene ID= novel_gene_chr16_3562 TPM= 5.31 Transcript Type= NA
chr16	67828157	67830457	67828157	67830457	-	transcript3565.chr16.nnic@NA	transcript3565.chr16.nnic	NA	67828157	67830457	Gene ID= novel_gene_chr16_3566 TPM= 2.12 Transcript Type= NA
chr16	67828159	67833897	67828159	67833897	-	ENST00000565157.5@CENPT	ENST00000565157.5	protein_coding	67833750,67832455,67832228,67832012,67831754,67831576,67831216,67829765,67829423,67828667,67828474,67828159	67833897,67832545,67832315,67832108,67831890,67831612,67831358,67830548,67829516,67828843,67828578,67828390	Gene ID= ENSG00000102901.12 TPM= 13.81 Transcript Type= retained_intron
chr16	67828157	67833913	67828157	67833913	-	ENST00000569862.5@CENPT	ENST00000569862.5	protein_coding	67833750,67832228,67832012,67831754,67831576,67829765,67829423,67828667,67828474,67828157	67833913,67832545,67832108,67831890,67831612,67831358,67829516,67828843,67828578,67828390	Gene ID= ENSG00000102901.12 TPM= 3.19 Transcript Type= retained_intron
chr16	67842082	67844195	67842082	67844195	+	ENST00000303596.2@THAP11	ENST00000303596.2	protein_coding	67842082	67844195	Gene ID= ENSG00000168286.2 TPM= 135.96 Transcript Type= protein_coding
chr16	67846732	67872567	67846732	67872567	+	ENST00000219169.8@NUTF2	ENST00000219169.8	protein_coding	67846732,67865102,67868340,67868501,67870800	67846985,67865229,67868411,67868599,67872567	Gene ID= ENSG00000102898.11 TPM= 103.03 Transcript Type= protein_coding
chr16	67847161	67871323	67847161	67871323	+	ENST00000569436.6@NUTF2	ENST00000569436.6	protein_coding	67847161,67865102,67868340,67868501,67870800	67847456,67865229,67868411,67868599,67871323	Gene ID= ENSG00000102898.11 TPM= 27.62 Transcript Type= protein_coding
chr16	67873052	67884497	67873052	67884497	+	transcript3574.chr16.nnic@EDC4	transcript3574.chr16.nnic	protein_coding	67873052,67875945,67876488,67876873,67877217,67877509,67877741,67878166,67878360,67878536,67878737,67878957,67879237,67879412,67879587,67879850,67880063,67880557,67881076,67881265,67881497,67881668,67881954,67882212,67882429,67882679,67882958,67883568,67883956	67873343,67876101,67876599,67876972,67877406,67877656,67877845,67878275,67878443,67878631,67878839,67879137,67879309,67879503,67879774,67879971,67880141,67880990,67881180,67881417,67881533,67881845,67882109,67882327,67882594,67882865,67883177,67883731,67884497	Gene ID= ENSG00000038358.14 TPM= 13.19 Transcript Type= NA
chr16	67873023	67884503	67873023	67884503	+	ENST00000358933.9@EDC4	ENST00000358933.9	protein_coding	67873023,67875945,67876488,67876873,67877217,67877509,67877741,67878166,67878360,67878536,67878737,67878957,67879237,67879412,67879587,67879850,67880063,67880557,67881076,67881265,67881497,67881668,67881954,67882212,67882429,67882679,67882958,67883568,67883956	67873343,67876101,67876599,67876972,67877406,67877656,67877845,67878275,67878443,67878631,67878839,67879137,67879309,67879503,67879774,67879971,67880216,67880990,67881180,67881417,67881533,67881845,67882109,67882327,67882594,67882865,67883177,67883731,67884503	Gene ID= ENSG00000038358.14 TPM= 62.05 Transcript Type= protein_coding
chr16	67873052	67884497	67873052	67884497	+	transcript3576.chr16.nic@EDC4	transcript3576.chr16.nic	protein_coding	67873052,67875945,67876488,67876873,67877217,67877509,67877741,67878166,67878360,67878536,67878737,67878957,67879237,67879412,67879587,67879850,67880063,67880557,67881076,67881265,67881497,67881668,67882212,67882429,67882679,67882958,67883568,67883956	67873343,67876101,67876599,67876972,67877406,67877656,67877845,67878275,67878443,67878631,67878839,67879137,67879309,67879503,67879774,67879971,67880216,67880990,67881180,67881417,67881533,67882109,67882327,67882594,67882865,67883177,67883731,67884497	Gene ID= ENSG00000038358.14 TPM= 11.6 Transcript Type= NA
chr16	67873052	67884497	67873052	67884497	+	transcript3581.chr16.nic@EDC4	transcript3581.chr16.nic	protein_coding	67873052,67875945,67876488,67876873,67877217,67877509,67877741,67878360,67878536,67878737,67878957,67879237,67879412,67879587,67879850,67880063,67880557,67881076,67881265,67881497,67881668,67882212,67882429,67882679,67882958,67883568,67883956	67873343,67876101,67876599,67876972,67877406,67877656,67878275,67878443,67878631,67878839,67879137,67879309,67879503,67879774,67879971,67880216,67880990,67881180,67881417,67881533,67882109,67882327,67882594,67882865,67883177,67883731,67884497	Gene ID= ENSG00000038358.14 TPM= 10.89 Transcript Type= NA
chr16	67884805	67886372	67884805	67886372	+	ENST00000339176.7@NRN1L	ENST00000339176.7	protein_coding	67884805,67885722,67885974	67884982,67885854,67886372	Gene ID= ENSG00000188038.7 TPM= 7.44 Transcript Type= protein_coding
chr16	67893251	67929676	67893251	67929676	+	transcript3586.chr16.nnic@PSKH1	transcript3586.chr16.nnic	protein_coding	67893251,67908680,67927325,67929485	67893371,67909706,67929366,67929676	Gene ID= ENSG00000159792.9 TPM= 4.25 Transcript Type= NA
chr16	67893272	67929678	67893272	67929678	+	ENST00000291041.5@PSKH1	ENST00000291041.5	protein_coding	67893272,67908680,67927325	67893371,67909706,67929678	Gene ID= ENSG00000159792.9 TPM= 18.06 Transcript Type= protein_coding
chr16	67893272	67910088	67893272	67910088	+	ENST00000570631.5@PSKH1	ENST00000570631.5	protein_coding	67893272,67908680	67893371,67910088	Gene ID= ENSG00000159792.9 TPM= 2.12 Transcript Type= protein_coding
chr16	67925200	67928300	67925200	67928300	-	transcript3593.chr16.nnic@NA	transcript3593.chr16.nnic	NA	67925200	67928300	Gene ID= novel_gene_chr16_3594 TPM= 4.25 Transcript Type= NA
chr16	67934506	67935790	67934506	67935790	-	transcript3601.chr16.nic@PSMB10	transcript3601.chr16.nic	protein_coding	67935420,67934797,67934506	67935790,67934948,67934671	Gene ID= ENSG00000205220.11 TPM= 3.72 Transcript Type= NA
chr16	67934506	67935795	67934506	67935795	-	ENST00000570985.1@PSMB10	ENST00000570985.1	protein_coding	67935582,67935420,67934797,67934506	67935795,67935478,67934948,67934671	Gene ID= ENSG00000205220.11 TPM= 40.89 Transcript Type= retained_intron
chr16	67939148	67940209	67939148	67940209	-	transcript3621.chr16.nnic@NA	transcript3621.chr16.nnic	NA	67939148	67940209	Gene ID= novel_gene_chr16_3622 TPM= 2.12 Transcript Type= NA
chr16	67939750	67944131	67939750	67944131	-	ENST00000264005.9@LCAT	ENST00000264005.9	protein_coding	67943948,67943056,67942861,67942671,67942363,67939750	67944131,67943212,67942976,67942766,67942587,67940478	Gene ID= ENSG00000213398.7 TPM= 2.12 Transcript Type= protein_coding
chr16	67939882	67942930	67939882	67942930	-	ENST00000573538.5@LCAT	ENST00000573538.5	protein_coding	67942861,67942671,67942363,67940737,67939882	67942930,67942766,67942587,67940831,67940478	Gene ID= ENSG00000213398.7 TPM= 3.19 Transcript Type= nonsense_mediated_decay
chr16	67943474	67968694	67943474	67968694	-	ENST00000316341.7@SLC12A4	ENST00000316341.7	protein_coding	67968439,67963465,67961575,67957898,67957742,67954643,67952184,67951823,67951140,67950962,67950654,67950319,67949800,67948061,67947669,67947331,67946937,67946438,67946171,67945951,67945764,67945369,67945087,67943474	67968694,67963559,67961706,67958044,67957796,67954773,67952425,67952037,67951304,67951060,67950711,67950493,67949918,67948159,67947788,67947435,67947105,67946633,67946340,67946082,67945871,67945553,67945220,67944931	Gene ID= ENSG00000124067.16 TPM= 6.29 Transcript Type= protein_coding
chr16	67943474	67968694	67943474	67968694	-	ENST00000422611.6@SLC12A4	ENST00000422611.6	protein_coding	67968439,67961575,67957898,67957742,67954643,67952184,67951823,67951140,67950962,67950654,67950319,67949800,67948061,67947669,67947331,67946937,67946438,67946171,67945951,67945764,67945369,67945087,67943474	67968694,67961706,67958044,67957796,67954773,67952425,67952037,67951304,67951060,67950711,67950493,67949918,67948159,67947788,67947435,67947105,67946633,67946340,67946082,67945871,67945553,67945220,67944931	Gene ID= ENSG00000124067.16 TPM= 8.94 Transcript Type= protein_coding
chr16	67944327	67968641	67944327	67968641	-	transcript3611.chr16.nic@SLC12A4	transcript3611.chr16.nic	protein_coding	67968439,67963465,67961575,67957898,67957742,67954643,67952184,67951823,67951140,67950962,67950654,67950319,67949800,67948061,67947669,67947331,67946937,67946171,67945951,67945764,67945369,67945087,67944327	67968641,67963559,67961706,67958044,67957796,67954773,67952425,67952037,67951304,67951060,67950711,67950493,67949918,67948159,67947788,67947435,67947105,67946340,67946082,67945871,67945553,67945220,67944931	Gene ID= ENSG00000124067.16 TPM= 11.42 Transcript Type= NA
chr16	67944327	67968636	67944327	67968636	-	transcript3616.chr16.nic@SLC12A4	transcript3616.chr16.nic	protein_coding	67968439,67952184,67951823,67951140,67950962,67950654,67950319,67949800,67948061,67947669,67947331,67946937,67946438,67946171,67945951,67945764,67945369,67945087,67944327	67968636,67952425,67952037,67951304,67951060,67950711,67950493,67949918,67948159,67947788,67947435,67947105,67946633,67946340,67946082,67945871,67945553,67945220,67944931	Gene ID= ENSG00000124067.16 TPM= 56.21 Transcript Type= NA
chr16	68021274	68023442	68021274	68023442	-	ENST00000332395.6@DDX28	ENST00000332395.6	protein_coding	68021274	68023442	Gene ID= ENSG00000182810.6 TPM= 22.31 Transcript Type= protein_coding
chr16	68022956	68079320	68022956	68079320	+	ENST00000565263.5@DUS2	ENST00000565263.5	protein_coding	68022956,68025415,68038006,68049505,68053564,68054574,68056364,68061066,68066317,68066566,68070134,68070940,68074034,68075355,68076632,68078445,68078749	68023351,68025494,68038149,68049550,68053655,68054617,68056424,68061113,68066382,68066636,68070220,68071108,68074155,68075504,68076719,68078518,68079320	Gene ID= ENSG00000167264.17 TPM= 2.12 Transcript Type= protein_coding
chr16	68023253	68079320	68023253	68079320	+	ENST00000358896.10@DUS2	ENST00000358896.10	protein_coding	68023253,68038006,68049505,68053564,68054574,68056364,68061066,68066317,68066566,68070134,68070940,68074034,68075355,68076632,68078445,68078749	68023351,68038149,68049550,68053655,68054617,68056424,68061113,68066382,68066636,68070220,68071108,68074155,68075504,68076719,68078518,68079320	Gene ID= ENSG00000167264.17 TPM= 4.25 Transcript Type= protein_coding
chr16	68023274	68031627	68023274	68031627	+	transcript3628.chr16.nnic@DUS2	transcript3628.chr16.nnic	protein_coding	68023274,68025415,68030757	68023351,68025494,68031627	Gene ID= ENSG00000167264.17 TPM= 3.19 Transcript Type= NA
chr16	68084751	68226934	68084751	68226934	+	ENST00000563319.5@NFATC3	ENST00000563319.5	protein_coding	68084751,68121987,68126448,68157869,68166843,68174374,68181475,68183240,68190768,68214329,68226350	68085180,68123121,68126610,68158068,68167015,68174514,68181530,68183366,68191775,68214432,68226934	Gene ID= ENSG00000072736.18 TPM= 5.31 Transcript Type= processed_transcript
chr16	68245359	68261056	68245359	68261056	+	transcript3635.chr16.nic@PLA2G15	transcript3635.chr16.nic	protein_coding	68245359,68249290,68253422,68254919,68255282,68255766,68259146	68245553,68249446,68253517,68255037,68255380,68255990,68261056	Gene ID= ENSG00000103066.12 TPM= 20.71 Transcript Type= NA
chr16	68245344	68261062	68245344	68261062	+	ENST00000219345.9@PLA2G15	ENST00000219345.9	protein_coding	68245344,68249290,68254919,68255282,68255766,68259146	68245553,68249446,68255037,68255380,68255990,68261062	Gene ID= ENSG00000103066.12 TPM= 119.49 Transcript Type= protein_coding
chr16	68257073	68258794	68257073	68258794	+	transcript3640.chr16.nnic@NA	transcript3640.chr16.nnic	NA	68257073	68258794	Gene ID= novel_gene_chr16_3641 TPM= 2.12 Transcript Type= NA
chr16	68264201	68288986	68264201	68288986	+	transcript3649.chr16.nnic@SLC7A6	transcript3649.chr16.nnic	protein_coding	68264201,68266593,68274691,68284880,68287746	68264576,68266721,68275249,68285013,68288986	Gene ID= ENSG00000103064.13 TPM= 4.25 Transcript Type= NA
chr16	68264201	68288986	68264201	68288986	+	transcript3658.chr16.nic@SLC7A6	transcript3658.chr16.nic	protein_coding	68264201,68266593,68274691,68287746	68264576,68266721,68275249,68288986	Gene ID= ENSG00000103064.13 TPM= 5.31 Transcript Type= NA
chr16	68264201	68275617	68264201	68275617	+	transcript3659.chr16.nic@SLC7A6	transcript3659.chr16.nic	protein_coding	68264201,68266593,68274691	68264576,68266721,68275617	Gene ID= ENSG00000103064.13 TPM= 2.12 Transcript Type= NA
chr16	68279077	68280598	68279077	68280598	+	transcript3662.chr16.nnic@NA	transcript3662.chr16.nnic	NA	68279077	68280598	Gene ID= novel_gene_chr16_3663 TPM= 3.19 Transcript Type= NA
chr16	68280742	68282908	68280742	68282908	-	transcript3666.chr16.nnic@NA	transcript3666.chr16.nnic	NA	68280742	68282908	Gene ID= novel_gene_chr16_3667 TPM= 3.19 Transcript Type= NA
chr16	68290236	68290462	68290236	68290462	-	transcript3664.chr16.nnic@NA	transcript3664.chr16.nnic	NA	68290236	68290462	Gene ID= novel_gene_chr16_3665 TPM= 6.37 Transcript Type= NA
chr16	68311019	68357259	68311019	68357259	+	transcript3670.chr16.nic@PRMT7	transcript3670.chr16.nic	protein_coding	68311019,68312042,68315897,68321426,68324683,68329066,68337459,68339322,68339788,68345675,68346145,68347211,68347631,68348342,68352248,68353492,68355723,68356701,68357054	68311099,68312176,68316074,68321462,68324832,68329174,68337571,68339563,68339968,68345802,68346280,68347294,68347678,68348431,68352409,68353566,68355883,68356797,68357259	Gene ID= ENSG00000132600.16 TPM= 18.41 Transcript Type= NA
chr16	68311019	68357259	68311019	68357259	+	transcript3673.chr16.nic@PRMT7	transcript3673.chr16.nic	protein_coding	68311019,68315897,68321426,68324683,68329066,68337459,68339322,68339788,68345675,68346145,68347211,68347631,68348342,68352248,68353492,68355723,68356701,68357054	68311099,68316074,68321462,68324832,68329174,68337571,68339563,68339968,68345802,68346280,68347294,68347678,68348431,68352409,68353566,68355883,68356797,68357259	Gene ID= ENSG00000132600.16 TPM= 12.03 Transcript Type= NA
chr16	68539297	68567135	68539297	68567135	+	ENST00000564558.5@ZFP90	ENST00000564558.5	protein_coding	68539297,68539758,68557998,68558375,68563044	68539479,68539825,68558124,68558568,68567135	Gene ID= ENSG00000184939.15 TPM= 1.06 Transcript Type= nonsense_mediated_decay
chr16	68539213	68567131	68539213	68567131	+	ENST00000570495.5@ZFP90	ENST00000570495.5	protein_coding	68539213,68539758,68557998,68558473,68563044	68539469,68539825,68558124,68558568,68567131	Gene ID= ENSG00000184939.15 TPM= 1.06 Transcript Type= protein_coding
chr16	69118010	69132570	69118010	69132570	-	ENST00000448552.6@CHTF8	ENST00000448552.6	protein_coding	69132484,69121436,69121053,69118010	69132570,69121493,69121170,69120649	Gene ID= ENSG00000168802.12 TPM= 14.87 Transcript Type= protein_coding
chr16	69132346	69169017	69132346	69169017	+	transcript3686.chr16.nnic@UTP4	transcript3686.chr16.nnic	protein_coding	69132346,69133458,69136696,69137801,69139825,69143178,69150537,69150813,69153584,69154393,69155871,69157084,69160356,69163083,69165341,69167075,69168882	69132689,69133618,69136887,69137885,69139914,69143389,69150708,69150904,69153680,69154457,69155993,69157240,69160462,69163178,69165526,69167123,69169017	Gene ID= ENSG00000141076.17 TPM= 7.44 Transcript Type= NA
chr16	69132596	69169020	69132596	69169020	+	ENST00000562237.5@UTP4	ENST00000562237.5	protein_coding	69132596,69133512,69136696,69137801,69139825,69143178,69150537,69150813,69153584,69154393,69155871,69157084,69160356,69163083,69165341,69167075,69168821	69132689,69133618,69136887,69137885,69139914,69143389,69150708,69150904,69153680,69154457,69155993,69157240,69160462,69163178,69165526,69167185,69169020	Gene ID= ENSG00000141076.17 TPM= 6.37 Transcript Type= protein_coding
chr16	69132602	69169021	69132602	69169021	+	transcript3690.chr16.nnic@UTP4	transcript3690.chr16.nnic	protein_coding	69132602,69133458,69136696,69137801,69139825,69143178,69150537,69150813,69153584,69154393,69155871,69157084,69160356,69163083,69165341,69168821	69132689,69133618,69136887,69137885,69139914,69143389,69150708,69150904,69153680,69154457,69155993,69157240,69160462,69163178,69165526,69169021	Gene ID= ENSG00000141076.17 TPM= 5.31 Transcript Type= NA
chr16	69187129	69309052	69187129	69309052	+	ENST00000336278.8@SNTB2	ENST00000336278.8	protein_coding	69187129,69245602,69260050,69270143,69284048,69299590,69300832	69187746,69245815,69260260,69270285,69284244,69299774,69309052	Gene ID= ENSG00000168807.16 TPM= 7.44 Transcript Type= protein_coding
chr16	69311317	69325046	69311317	69325046	+	transcript3704.chr16.nic@VPS4A	transcript3704.chr16.nic	protein_coding	69311317,69316008,69316225,69318650,69318823,69319387,69320141,69320688,69321051,69324208	69311532,69316119,69316372,69318711,69318942,69319543,69320289,69320769,69322700,69325046	Gene ID= ENSG00000132612.15 TPM= 29.74 Transcript Type= NA
chr16	69332596	69339583	69332596	69339583	-	ENST00000562081.2@COG8	ENST00000562081.2	protein_coding	69339176,69336505,69334521,69332596	69339583,69336712,69335348,69332882	Gene ID= ENSG00000213380.14 TPM= 19.12 Transcript Type= protein_coding
chr16	69325590	69327235	69325590	69327235	+	transcript3726.chr16.nnic@NA	transcript3726.chr16.nnic	NA	69325590	69327235	Gene ID= novel_gene_chr16_3727 TPM= 7.44 Transcript Type= NA
chr16	69326913	69339667	69326913	69339667	-	ENST00000306875.8@COG8	ENST00000306875.8	protein_coding	69339176,69336505,69334521,69332714,69330813,69326913	69339667,69336712,69335348,69332882,69331095,69329179	Gene ID= ENSG00000272617.2 TPM= 3.19 Transcript Type= protein_coding
chr16	69328621	69330595	69328621	69330595	-	ENST00000288022.1@PDF	ENST00000288022.1	protein_coding	69329997,69328621	69330595,69329179	Gene ID= ENSG00000258429.1 TPM= 8.5 Transcript Type= protein_coding
chr16	69339430	69343111	69339430	69343111	+	ENST00000254940.9@NIP7	ENST00000254940.9	protein_coding	69339430,69340006,69340194,69341180,69341533	69339885,69340092,69340332,69341320,69343111	Gene ID= ENSG00000132603.13 TPM= 12.75 Transcript Type= protein_coding
chr16	69364967	69385997	69364967	69385997	-	transcript3738.chr16.nic@TERF2	transcript3738.chr16.nic	protein_coding	69385593,69385391,69384580,69372269,69370483,69368376,69364967	69385997,69385486,69384710,69372355,69370629,69368482,69367199	Gene ID= ENSG00000132604.10 TPM= 8.5 Transcript Type= NA
chr16	69355561	69385988	69355561	69385988	-	ENST00000254942.7@TERF2	ENST00000254942.7	protein_coding	69385593,69385391,69384580,69372269,69370483,69368376,69366807,69361404,69357518,69355561	69385988,69385486,69384710,69372355,69370629,69368482,69367199,69361489,69357561,69357056	Gene ID= ENSG00000132604.10 TPM= 21.24 Transcript Type= protein_coding
chr16	69374825	69376878	69374825	69376878	+	transcript3747.chr16.nnic@NA	transcript3747.chr16.nnic	NA	69374825	69376878	Gene ID= novel_gene_chr16_3748 TPM= 2.12 Transcript Type= NA
chr16	69424619	69450238	69424619	69450238	+	ENST00000514123.5@CYB5B	ENST00000514123.5	protein_coding	69424619,69447150,69448115	69424857,69447278,69450238	Gene ID= ENSG00000103018.16 TPM= 1.06 Transcript Type= retained_intron
chr16	69458253	69461214	69458253	69461214	+	transcript3756.chr16.nnic@NA	transcript3756.chr16.nnic	NA	69458253	69461214	Gene ID= novel_gene_chr16_3757 TPM= 2.12 Transcript Type= NA
chr16	69703065	69704652	69703065	69704652	+	ENST00000561622.1@AC012321.1	ENST00000561622.1	3prime_overlapping_ncRNA	69703065	69704652	Gene ID= ENSG00000260772.1 TPM= 1.06 Transcript Type= 3prime_overlapping_ncRNA
chr16	69709401	69726951	69709401	69726951	-	ENST00000320623.9@NQO1	ENST00000320623.9	protein_coding	69726433,69718370,69718123,69714964,69713028,69709401	69726951,69718534,69718253,69715077,69713129,69711281	Gene ID= ENSG00000181019.12 TPM= 2.12 Transcript Type= protein_coding
chr16	69741867	69754940	69741867	69754940	-	ENST00000268802.9@NOB1	ENST00000268802.9	protein_coding	69754848,69754594,69752241,69749559,69749213,69748918,69748232,69744873,69741867	69754940,69754726,69752371,69749630,69749338,69749118,69748329,69745017,69742601	Gene ID= ENSG00000141101.12 TPM= 8.5 Transcript Type= protein_coding
chr16	69762306	69941741	69762306	69941741	+	ENST00000359154.6@WWP2	ENST00000359154.6	protein_coding	69762306,69786996,69798682,69799174,69840126,69842024,69871804,69888039,69908761,69917709,69925430,69929448,69930130,69931152,69931509,69931802,69933970,69935853,69936312,69937118,69937548,69939027,69939341,69939841	69762391,69787080,69798829,69799295,69840263,69842120,69871931,69888249,69908850,69917883,69925484,69929529,69930258,69931227,69931580,69931890,69934129,69935986,69936452,69937238,69937652,69939123,69939413,69941741	Gene ID= ENSG00000198373.12 TPM= 20.18 Transcript Type= protein_coding
chr16	69995465	70065871	69995465	70065871	-	transcript3778.chr16.nic@PDXDC2P-NPIPB14P	transcript3778.chr16.nic	processed_transcript	70065756,70042930,70042351,70038905,70036432,70034171,70031900,70030988,70024586,70023630,70023379,70021824,70018047,70014104,70011841,70010751,69996390,69995465	70065871,70043003,70042416,70039100,70036578,70034360,70031968,70031066,70024670,70023678,70023477,70021949,70018097,70014167,70011929,70010856,69996468,69996226	Gene ID= ENSG00000196696.12 TPM= 3.19 Transcript Type= NA
chr16	69976352	70065853	69976352	70065853	-	ENST00000530079.5@PDXDC2P-NPIPB14P	ENST00000530079.5	processed_transcript	70065756,70042930,70042351,70038905,70036432,70034171,70031900,70030988,70024586,70023630,70023379,70021824,70018047,70014104,70011841,70010751,69996390,69996069,69990597,69986381,69982658,69982350,69978222,69978077,69976352	70065853,70043003,70042416,70039100,70036578,70034360,70031968,70031066,70024670,70023678,70023477,70021949,70018097,70014167,70011929,70010856,69996468,69996226,69990683,69986509,69982757,69982494,69978282,69978112,69976732	Gene ID= ENSG00000196696.12 TPM= 3.19 Transcript Type= processed_transcript
chr16	70246778	70251930	70246778	70251930	-	ENST00000435634.2@EXOSC6	ENST00000435634.2	protein_coding	70246778	70251930	Gene ID= ENSG00000223496.2 TPM= 9.56 Transcript Type= protein_coding
chr16	70252295	70289543	70252295	70289543	-	ENST00000261772.12@AARS	ENST00000261772.12	protein_coding	70289421,70282620,70276966,70276486,70271781,70270196,70269618,70268271,70267659,70265538,70264958,70262346,70261044,70258980,70258033,70255728,70254621,70253919,70253714,70253268,70252295	70289543,70282784,70277154,70276631,70271972,70270340,70269763,70268379,70267809,70265662,70265102,70262524,70261157,70259186,70258217,70255836,70254734,70254038,70253800,70253381,70252906	Gene ID= ENSG00000090861.15 TPM= 42.49 Transcript Type= protein_coding
chr16	70299053	70335283	70299053	70335283	+	ENST00000288071.10@DDX19B	ENST00000288071.10	protein_coding	70299053,70312609,70314902,70315969,70317496,70324585,70325574,70329292,70329831,70331722,70332968,70333521	70299354,70312657,70314955,70316104,70317588,70324687,70325688,70329469,70330068,70331884,70333159,70335283	Gene ID= ENSG00000157349.16 TPM= 26.55 Transcript Type= protein_coding
chr16	70299162	70333826	70299162	70333826	+	ENST00000393657.6@DDX19B	ENST00000393657.6	protein_coding	70299162,70315969,70317496,70324585,70325574,70329292,70329831,70331722,70332968,70333521	70299354,70316104,70317588,70324687,70325688,70329469,70330068,70331884,70333159,70333826	Gene ID= ENSG00000157349.16 TPM= 1.06 Transcript Type= protein_coding
chr16	70346871	70373381	70346871	70373381	+	transcript3801.chr16.nic@DDX19A	transcript3801.chr16.nic	protein_coding	70346871,70350557,70355485,70356112,70356846,70361418,70364543,70365017,70366085,70366624,70370223,70371372,70371925	70347048,70350605,70355535,70356247,70356906,70361510,70364645,70365131,70366262,70366861,70370385,70371563,70373381	Gene ID= ENSG00000168872.16 TPM= 12.21 Transcript Type= NA
chr16	70346829	70373383	70346829	70373383	+	ENST00000302243.11@DDX19A	ENST00000302243.11	protein_coding	70346829,70350557,70355485,70356112,70361418,70364543,70365017,70366085,70366624,70370223,70371372,70371925	70347048,70350605,70355535,70356247,70361510,70364645,70365131,70366262,70366861,70370385,70371563,70373383	Gene ID= ENSG00000168872.16 TPM= 34.52 Transcript Type= protein_coding
chr16	70445293	70445399	70445293	70445399	-	ENST00000363283.1@RNU6-23P	ENST00000363283.1	snRNA	70445293	70445399	Gene ID= ENSG00000200153.1 TPM= 1.06 Transcript Type= snRNA
chr16	70454421	70480274	70454421	70480274	+	ENST00000288078.10@FUK	ENST00000288078.10	protein_coding	70454421,70463169,70463623,70465126,70466132,70466882,70467374,70467886,70468849,70469152,70470314,70470971,70471182,70472541,70472983,70474129,70474528,70474790,70475350,70475648,70478272,70478551,70479180,70479579	70454630,70463272,70463774,70465176,70466257,70466954,70467471,70467966,70468968,70469323,70470426,70471072,70471352,70472605,70473353,70474339,70474694,70475011,70475493,70475767,70478459,70478650,70479403,70480274	Gene ID= ENSG00000157353.16 TPM= 18.59 Transcript Type= protein_coding
chr16	70477149	70480274	70477149	70480274	+	transcript3828.chr16.nic@FUK	transcript3828.chr16.nic	protein_coding	70477149,70479579	70479403,70480274	Gene ID= ENSG00000157353.16 TPM= 2.66 Transcript Type= NA
chr16	70480568	70523558	70480568	70523558	-	ENST00000564415.5@COG4	ENST00000564415.5	protein_coding	70523373,70519649,70517626,70515868,70514335,70512239,70509916,70509231,70508406,70500958,70497937,70497221,70496266,70490330,70483853,70482729,70482092,70481764,70481359,70480568	70523558,70519731,70517740,70516040,70514509,70512432,70510021,70509388,70508464,70501091,70498055,70497387,70496431,70490392,70483969,70482821,70482175,70481865,70481487,70481144	Gene ID= ENSG00000103051.18 TPM= 4.06 Transcript Type= nonsense_mediated_decay
chr16	70480569	70523565	70480569	70523565	-	ENST00000323786.9@COG4	ENST00000323786.9	protein_coding	70523373,70519649,70517626,70514335,70512239,70509916,70509231,70508406,70500958,70497937,70497221,70496266,70490330,70483853,70482729,70482092,70481764,70481359,70480569	70523565,70519731,70517740,70514509,70512432,70510021,70509388,70508464,70501091,70498055,70497387,70496431,70490392,70483969,70482821,70482175,70481865,70481487,70481144	Gene ID= ENSG00000103051.18 TPM= 107.88 Transcript Type= protein_coding
chr16	70480571	70523560	70480571	70523560	-	transcript3821.chr16.nnic@COG4	transcript3821.chr16.nnic	protein_coding	70523373,70519649,70517626,70514335,70512239,70509916,70509231,70508406,70500958,70497937,70497221,70496266,70490330,70483853,70482780,70482092,70481764,70481359,70480571	70523560,70519731,70517740,70514509,70512432,70510021,70509388,70508464,70501091,70498055,70497387,70496431,70490392,70483969,70482821,70482175,70481865,70481487,70481144	Gene ID= ENSG00000103051.18 TPM= 4.14 Transcript Type= NA
chr16	70480571	70523560	70480571	70523560	-	transcript3823.chr16.nic@COG4	transcript3823.chr16.nic	protein_coding	70523373,70519649,70517626,70514335,70512239,70509916,70508406,70500958,70497937,70497221,70496266,70490330,70483853,70482729,70482092,70481764,70481359,70480571	70523560,70519731,70517740,70514509,70512432,70510021,70509388,70501091,70498055,70497387,70496431,70490392,70483969,70482821,70482175,70481865,70481487,70481144	Gene ID= ENSG00000103051.18 TPM= 6.45 Transcript Type= NA
chr16	70480572	70523554	70480572	70523554	-	ENST00000393612.8@COG4	ENST00000393612.8	protein_coding	70523373,70519649,70517626,70514335,70512239,70509916,70509231,70508406,70500958,70497937,70497221,70496266,70483853,70482729,70482092,70481764,70481359,70480572	70523554,70519731,70517740,70514509,70512432,70510021,70509388,70508464,70501091,70498055,70497387,70496431,70483969,70482821,70482175,70481865,70481487,70481144	Gene ID= ENSG00000103051.18 TPM= 1.75 Transcript Type= protein_coding
chr16	70523788	70577668	70523788	70577668	+	ENST00000302516.9@SF3B3	ENST00000302516.9	protein_coding	70523788,70526587,70528873,70530745,70532479,70535308,70538323,70539104,70541669,70544438,70548370,70554446,70555051,70556179,70556886,70560469,70561630,70563876,70565065,70565368,70567411,70568283,70569043,70570006,70571095,70571673	70523928,70526726,70529199,70530917,70532620,70535420,70538460,70539207,70541834,70544533,70548442,70554597,70555206,70556334,70557029,70560591,70561784,70564050,70565270,70565524,70567536,70568495,70569141,70570149,70571199,70577668	Gene ID= ENSG00000189091.12 TPM= 7.44 Transcript Type= protein_coding
chr16	70661204	70686066	70661204	70686066	-	ENST00000338779.10@MTSS1L	ENST00000338779.10	protein_coding	70685723,70680964,70680794,70679971,70679786,70679630,70679315,70678252,70677792,70676881,70674306,70665466,70664920,70664598,70661204	70686066,70681025,70680867,70680055,70679877,70679704,70679323,70678409,70677899,70676978,70674528,70665540,70665096,70664763,70664449	Gene ID= ENSG00000132613.14 TPM= 8.5 Transcript Type= protein_coding
chr16	70666029	70667298	70666029	70667298	+	transcript3840.chr16.nnic@NA	transcript3840.chr16.nnic	NA	70666029	70667298	Gene ID= novel_gene_chr16_3841 TPM= 3.19 Transcript Type= NA
chr16	70712767	70801173	70712767	70801173	-	transcript3844.chr16.nnic@VAC14	transcript3844.chr16.nnic	protein_coding	70800797,70786215,70785702,70784776,70784113,70783445,70783033,70781869,70780790,70772109,70762881,70762540,70744423,70731301,70712767	70801173,70786365,70785869,70784838,70784220,70783554,70783139,70782003,70780939,70772172,70763025,70762605,70744579,70731627,70712974	Gene ID= ENSG00000103043.14 TPM= 2.12 Transcript Type= NA
chr16	70687441	70691049	70687441	70691049	-	ENST00000571759.1@VAC14	ENST00000571759.1	protein_coding	70687441	70691049	Gene ID= ENSG00000103043.14 TPM= 5.84 Transcript Type= processed_transcript
chr16	70687439	70801161	70687439	70801161	-	ENST00000261776.9@VAC14	ENST00000261776.9	protein_coding	70800797,70786215,70785702,70784776,70784113,70783445,70783033,70781869,70780790,70772109,70762881,70762540,70744423,70731495,70698637,70697139,70695544,70692821,70687439	70801161,70786365,70785869,70784838,70784220,70783554,70783139,70782003,70780939,70772172,70763025,70762605,70744579,70731627,70698811,70697257,70695623,70692971,70688090	Gene ID= ENSG00000103043.14 TPM= 46.2 Transcript Type= protein_coding
chr16	70796955	70800135	70796955	70800135	+	transcript3848.chr16.nnic@NA	transcript3848.chr16.nnic	NA	70796955	70800135	Gene ID= novel_gene_chr16_3849 TPM= 2.12 Transcript Type= NA
chr16	71282300	71289539	71282300	71289539	-	ENST00000434935.6@CMTR2	ENST00000434935.6	protein_coding	71289136,71288878,71282300	71289539,71288937,71285939	Gene ID= ENSG00000180917.17 TPM= 5.31 Transcript Type= protein_coding
chr16	71447636	71462252	71447636	71462252	-	ENST00000539742.5@ZNF23	ENST00000539742.5	protein_coding	71462210,71456764,71447636	71462252,71456828,71449885	Gene ID= ENSG00000167377.17 TPM= 1.06 Transcript Type= processed_transcript
chr16	71729000	71809201	71729000	71809201	-	ENST00000299980.8@AP1G1	ENST00000299980.8	protein_coding	71808763,71789279,71774468,71773221,71771156,71769623,71765489,71764646,71764350,71761512,71758808,71756019,71753833,71750210,71749894,71748251,71746588,71745473,71745144,71739234,71738942,71734609,71729000	71809201,71789482,71774592,71773362,71771252,71769699,71765584,71764726,71764448,71761567,71758921,71756159,71753887,71750332,71749983,71748378,71746692,71745614,71745270,71739341,71739102,71734707,71733159	Gene ID= ENSG00000166747.12 TPM= 12.75 Transcript Type= protein_coding
chr16	71763931	71768511	71763931	71768511	+	transcript3869.chr16.nnic@NA	transcript3869.chr16.nnic	NA	71763931	71768511	Gene ID= novel_gene_chr16_3870 TPM= 2.12 Transcript Type= NA
chr16	71845966	71929002	71845966	71929002	+	transcript3871.chr16.nic@IST1	transcript3871.chr16.nic	protein_coding	71845966,71848010,71883117,71885247,71894721,71915626,71916462,71917047,71920739,71921343,71922474,71923288,71924769,71927614	71846104,71848071,71883403,71885376,71894858,71915728,71916642,71917134,71920822,71921453,71922680,71923380,71924817,71929002	Gene ID= ENSG00000182149.20 TPM= 8.23 Transcript Type= NA
chr16	71895516	71929002	71895516	71929002	+	transcript3874.chr16.nnic@IST1	transcript3874.chr16.nnic	protein_coding	71895516,71915626,71916462,71917047,71918141,71920739,71921343,71922474,71923288,71924769,71927614	71895589,71915728,71916642,71917134,71918258,71920822,71921453,71922680,71923380,71924817,71929002	Gene ID= ENSG00000182149.20 TPM= 7.7 Transcript Type= NA
chr16	71895249	71931199	71895249	71931199	+	ENST00000378799.10@IST1	ENST00000378799.10	protein_coding	71895249,71915626,71916462,71917047,71920739,71921343,71922474,71923288,71924769,71927614	71895589,71915728,71916642,71917134,71920822,71921453,71922680,71923380,71924817,71931199	Gene ID= ENSG00000182149.20 TPM= 1.41 Transcript Type= protein_coding
chr16	71895508	71928974	71895508	71928974	+	transcript3882.chr16.nic@IST1	transcript3882.chr16.nic	protein_coding	71895508,71915626,71916462,71917047,71920739,71921343,71922474,71923288,71927614	71895589,71915728,71916642,71917134,71920822,71921453,71922680,71923384,71928974	Gene ID= ENSG00000182149.20 TPM= 7.79 Transcript Type= NA
chr16	71895513	71929002	71895513	71929002	+	transcript3883.chr16.nic@IST1	transcript3883.chr16.nic	protein_coding	71895513,71915626,71916462,71917047,71920739,71921343,71922474,71923288,71927614	71895589,71915728,71916642,71917134,71920822,71921453,71922680,71924817,71929002	Gene ID= ENSG00000182149.20 TPM= 8.85 Transcript Type= NA
chr16	71895543	71929010	71895543	71929010	+	ENST00000329908.12@IST1	ENST00000329908.12	protein_coding	71895543,71915626,71916462,71917047,71920739,71921343,71922474,71923288,71924773,71927614	71895589,71915728,71916642,71917134,71920822,71921453,71922680,71923380,71924817,71929010	Gene ID= ENSG00000182149.20 TPM= 85.24 Transcript Type= protein_coding
chr16	71895553	71929008	71895553	71929008	+	ENST00000378798.9@IST1	ENST00000378798.9	protein_coding	71895553,71915626,71916462,71917047,71920739,71921343,71922474,71924769,71927614	71895589,71915728,71916642,71917134,71920822,71921453,71922680,71924817,71929008	Gene ID= ENSG00000182149.20 TPM= 10.89 Transcript Type= protein_coding
chr16	71845991	71857333	71845991	71857333	+	ENST00000427980.6@ATXN1L	ENST00000427980.6	protein_coding	71845991,71848010,71849624	71846104,71848071,71857333	Gene ID= ENSG00000224470.7 TPM= 40.36 Transcript Type= protein_coding
chr16	71859685	71884222	71859685	71884222	-	transcript3888.chr16.nic@ZNF821	transcript3888.chr16.nic	protein_coding	71883908,71883211,71879907,71867893,71864903,71864138,71861776,71859685	71884222,71883273,71880023,71868037,71865048,71864242,71861942,71860672	Gene ID= ENSG00000102984.14 TPM= 3.72 Transcript Type= NA
chr16	71859685	71884222	71859685	71884222	-	transcript3893.chr16.nic@ZNF821	transcript3893.chr16.nic	protein_coding	71883908,71883211,71879907,71867893,71864138,71861776,71859685	71884222,71883273,71880023,71868037,71864242,71861942,71860672	Gene ID= ENSG00000102984.14 TPM= 2.12 Transcript Type= NA
chr16	71859680	71884190	71859680	71884190	-	ENST00000425432.5@ZNF821	ENST00000425432.5	protein_coding	71883908,71883211,71879907,71867912,71864903,71864138,71861776,71859680	71884190,71883273,71880023,71868037,71865048,71864242,71861942,71860672	Gene ID= ENSG00000102984.14 TPM= 7.97 Transcript Type= protein_coding
chr16	71859680	71884190	71859680	71884190	-	ENST00000611294.4@ZNF821	ENST00000611294.4	protein_coding	71883908,71883211,71879907,71867912,71864903,71864138,71859680	71884190,71883273,71880023,71868037,71865048,71864242,71860672	Gene ID= ENSG00000102984.14 TPM= 3.19 Transcript Type= protein_coding
chr16	72008744	72025416	72008744	72025416	+	ENST00000219240.8@DHODH	ENST00000219240.8	protein_coding	72008744,72012050,72014473,72017024,72021124,72022362,72023165,72023474,72024145	72008785,72012262,72014672,72017106,72021311,72022475,72023318,72023633,72025416	Gene ID= ENSG00000102967.11 TPM= 13.81 Transcript Type= protein_coding
chr16	72015623	72024512	72015623	72024512	+	ENST00000571392.1@DHODH	ENST00000571392.1	protein_coding	72015623,72023165,72023480,72024145	72017106,72023323,72023633,72024512	Gene ID= ENSG00000102967.11 TPM= 2.12 Transcript Type= retained_intron
chr16	72054595	72061054	72054595	72061054	+	ENST00000355906.9@HP	ENST00000355906.9	protein_coding	72054595,72056161,72056530,72057392,72058254,72059114,72060112	72054657,72056243,72056631,72057466,72058355,72059188,72061054	Gene ID= ENSG00000257017.8 TPM= 7.44 Transcript Type= protein_coding
chr16	72073247	72077246	72073247	72077246	+	transcript3912.chr16.nnic@HPR	transcript3912.chr16.nnic	protein_coding	72073247,72073892,72074284,72075145,72076303	72073293,72073977,72074385,72075219,72077246	Gene ID= ENSG00000261701.6 TPM= 6.37 Transcript Type= NA
chr16	72074051	72077246	72074051	72077246	+	transcript3913.chr16.nnic@HPR	transcript3913.chr16.nnic	protein_coding	72074051,72074284,72075145,72076303	72074177,72074385,72075219,72077246	Gene ID= ENSG00000261701.6 TPM= 7.44 Transcript Type= NA
chr16	72074147	72077246	72074147	72077246	+	transcript3914.chr16.nic@HPR	transcript3914.chr16.nic	protein_coding	72074147,72075145,72076303	72074385,72075219,72077246	Gene ID= ENSG00000261701.6 TPM= 49.92 Transcript Type= NA
chr16	72084853	72093651	72084853	72093651	-	ENST00000268483.7@TXNL4B	ENST00000268483.7	protein_coding	72093367,72090618,72088987,72084853	72093651,72090786,72089138,72086802	Gene ID= ENSG00000140830.8 TPM= 5.31 Transcript Type= protein_coding
chr16	72093562	72112912	72093562	72112912	+	ENST00000268482.7@DHX38	ENST00000268482.7	protein_coding	72093562,72096139,72096822,72097677,72098645,72098927,72099204,72099732,72100436,72101086,72101500,72103074,72103602,72103946,72104486,72105027,72105232,72105517,72106005,72107340,72107645,72108227,72108473,72108800,72109415,72110956,72112413	72094051,72096480,72097009,72097781,72098792,72099045,72099280,72099887,72100597,72101193,72101612,72103211,72103788,72104131,72104626,72105137,72105348,72105624,72106117,72107548,72107799,72108382,72108607,72108925,72109510,72111077,72112912	Gene ID= ENSG00000140829.11 TPM= 56.29 Transcript Type= protein_coding
chr16	72887912	72889503	72887912	72889503	+	transcript3931.chr16.nnic@NA	transcript3931.chr16.nnic	NA	72887912	72889503	Gene ID= novel_gene_chr16_3932 TPM= 4.25 Transcript Type= NA
chr16	72947032	72949768	72947032	72949768	+	transcript3929.chr16.nnic@NA	transcript3929.chr16.nnic	NA	72947032	72949768	Gene ID= novel_gene_chr16_3930 TPM= 2.12 Transcript Type= NA
chr16	73053556	73055026	73053556	73055026	+	transcript3933.chr16.nnic@NA	transcript3933.chr16.nnic	NA	73053556	73055026	Gene ID= novel_gene_chr16_3934 TPM= 2.12 Transcript Type= NA
chr16	74296820	74305888	74296820	74305888	+	ENST00000568717.1@PSMD7	ENST00000568717.1	protein_coding	74296820,74299576,74300115,74301052,74301555,74302212,74304303,74305289	74296988,74299745,74300206,74301144,74301652,74302292,74304394,74305888	Gene ID= ENSG00000103035.10 TPM= 1.06 Transcript Type= nonsense_mediated_decay
chr16	74296775	74306288	74296775	74306288	+	ENST00000219313.8@PSMD7	ENST00000219313.8	protein_coding	74296775,74300115,74301052,74301555,74302212,74304303,74305289	74296988,74300206,74301144,74301652,74302292,74304394,74306288	Gene ID= ENSG00000103035.10 TPM= 113.65 Transcript Type= protein_coding
chr16	74296814	74297967	74296814	74297967	+	transcript3950.chr16.nnic@NA	transcript3950.chr16.nnic	NA	74296814	74297967	Gene ID= novel_gene_chr16_3951 TPM= 4.25 Transcript Type= NA
chr16	74305739	74307770	74305739	74307770	-	ENST00000621548.1@AC009120.2	ENST00000621548.1	processed_transcript	74305739	74307770	Gene ID= ENSG00000259972.2 TPM= 1.06 Transcript Type= lincRNA
chr16	74317534	74319905	74317534	74319905	-	transcript3952.chr16.nnic@NA	transcript3952.chr16.nnic	NA	74317534	74319905	Gene ID= novel_gene_chr16_3953 TPM= 4.25 Transcript Type= NA
chr16	74452790	74607111	74452790	74607111	-	transcript3960.chr16.nic@GLG1	transcript3960.chr16.nic	protein_coding	74606657,74508839,74503531,74496441,74494760,74492957,74491001,74485796,74483023,74480241,74477396,74474546,74472349,74471173,74469985,74468946,74467756,74465676,74463356,74462488,74462094,74459682,74457874,74456649,74452790	74607111,74508925,74503746,74496644,74494831,74493140,74491215,74485917,74483124,74480394,74477533,74474632,74472411,74471286,74470073,74469063,74467848,74465813,74463479,74462630,74462195,74459789,74457994,74456755,74453334	Gene ID= ENSG00000090863.11 TPM= 23.37 Transcript Type= NA
chr16	74447427	74607114	74447427	74607114	-	ENST00000205061.9@GLG1	ENST00000205061.9	protein_coding	74606657,74532121,74508839,74503531,74496441,74494760,74492957,74491001,74485796,74483023,74480241,74477396,74474546,74472349,74471173,74469985,74468946,74467756,74465676,74463356,74462488,74462094,74459682,74457874,74456649,74453171,74447427	74607114,74532153,74508925,74503746,74496644,74494831,74493140,74491215,74485917,74483124,74480394,74477533,74474632,74472411,74471286,74470073,74469063,74467848,74465813,74463479,74462630,74462195,74459789,74457994,74456755,74453334,74452131	Gene ID= ENSG00000090863.11 TPM= 50.98 Transcript Type= protein_coding
chr16	74451959	74607094	74451959	74607094	-	ENST00000422840.6@GLG1	ENST00000422840.6	protein_coding	74606657,74532121,74508839,74503531,74496441,74494760,74492957,74491001,74485796,74483023,74480241,74477396,74474546,74472349,74471173,74469985,74468946,74467756,74465676,74463356,74462488,74462094,74459682,74457874,74456649,74451959	74607094,74532153,74508925,74503746,74496644,74494831,74493140,74491215,74485917,74483124,74480394,74477533,74474632,74472411,74471286,74470073,74469063,74467848,74465813,74463479,74462630,74462195,74459789,74457994,74456755,74453334	Gene ID= ENSG00000090863.11 TPM= 40.36 Transcript Type= protein_coding
chr16	74621394	74666881	74621394	74666881	-	ENST00000361070.8@RFWD3	ENST00000361070.8	protein_coding	74666786,74660932,74651920,74649132,74644541,74644362,74637856,74636346,74632523,74630781,74628452,74626343,74621394	74666881,74661451,74652122,74649202,74644735,74644453,74637970,74636577,74632673,74630957,74628666,74626554,74624071	Gene ID= ENSG00000168411.13 TPM= 2.12 Transcript Type= protein_coding
chr16	74671861	74700914	74671861	74700914	-	ENST00000308807.11@MLKL	ENST00000308807.11	protein_coding	74700453,74695298,74692342,74691277,74685486,74682651,74678899,74675613,74675355,74674960,74671861	74700914,74695759,74692416,74691463,74685583,74682786,74678980,74675764,74675404,74675100,74672538	Gene ID= ENSG00000168404.12 TPM= 1.06 Transcript Type= protein_coding
chr16	74912118	74985112	74912118	74985112	-	transcript3991.chr16.nic@WDR59	transcript3991.chr16.nic	protein_coding	74984964,74965773,74956475,74951458,74949718,74948519,74942738,74938150,74923926,74921947,74917929,74916127,74915870,74912118	74985112,74965822,74956610,74951543,74949798,74948556,74942826,74938266,74924003,74922103,74918008,74916259,74915994,74912362	Gene ID= ENSG00000103091.14 TPM= 3.19 Transcript Type= NA
chr16	74873587	74910904	74873587	74910904	-	transcript3993.chr16.nic@WDR59	transcript3993.chr16.nic	protein_coding	74909501,74908908,74903947,74893679,74892484,74889703,74888169,74887683,74886270,74885653,74873587	74910904,74908977,74904100,74893812,74892565,74889815,74888319,74887755,74886396,74885795,74874444	Gene ID= ENSG00000103091.14 TPM= 3.19 Transcript Type= NA
chr16	74873587	74904136	74873587	74904136	-	transcript3994.chr16.nic@WDR59	transcript3994.chr16.nic	protein_coding	74903947,74893679,74892484,74889703,74888169,74887683,74886270,74885653,74873587	74904136,74893812,74892565,74889815,74888319,74887755,74886396,74885795,74874444	Gene ID= ENSG00000103091.14 TPM= 7.44 Transcript Type= NA
chr16	75043792	75047199	75043792	75047199	-	transcript4026.chr16.nnic@NA	transcript4026.chr16.nnic	NA	75043792	75047199	Gene ID= novel_gene_chr16_4027 TPM= 14.87 Transcript Type= NA
chr16	75110604	75112001	75110604	75112001	-	transcript4028.chr16.nnic@NA	transcript4028.chr16.nnic	NA	75110604	75112001	Gene ID= novel_gene_chr16_4029 TPM= 3.19 Transcript Type= NA
chr16	75111860	75116797	75111860	75116797	-	transcript4007.chr16.nic@LDHD	transcript4007.chr16.nic	protein_coding	75116649,75115548,75115198,75114827,75114526,75113966,75113742,75113535,75112602,75111860	75116797,75115660,75115339,75114968,75114685,75114165,75113870,75113662,75112924,75112521	Gene ID= ENSG00000166816.13 TPM= 7.44 Transcript Type= NA
chr16	75111860	75116767	75111860	75116767	-	ENST00000300051.8@LDHD	ENST00000300051.8	protein_coding	75116649,75115548,75115198,75114827,75114526,75113966,75113742,75113535,75112834,75112602,75111860	75116767,75115660,75115339,75114968,75114685,75114234,75113870,75113662,75112924,75112713,75112521	Gene ID= ENSG00000166816.13 TPM= 88.16 Transcript Type= protein_coding
chr16	75111896	75116771	75111896	75116771	-	ENST00000450168.2@LDHD	ENST00000450168.2	protein_coding	75116649,75115548,75115198,75114827,75114526,75113966,75113742,75113535,75112834,75112602,75111896	75116771,75115660,75115339,75114968,75114685,75114165,75113870,75113662,75112924,75112713,75112521	Gene ID= ENSG00000166816.13 TPM= 64.79 Transcript Type= protein_coding
chr16	75148582	75172236	75148582	75172236	+	ENST00000393430.6@ZFP1	ENST00000393430.6	protein_coding	75148582,75152909,75166770,75169253	75148662,75152966,75166896,75172236	Gene ID= ENSG00000184517.11 TPM= 1.06 Transcript Type= protein_coding
chr16	75229037	75251661	75229037	75251661	-	transcript4040.chr16.nnic@BCAR1	transcript4040.chr16.nnic	protein_coding	75251458,75242470,75237183,75236882,75234889,75233846,75229037	75251661,75243090,75237344,75236998,75235986,75233935,75230023	Gene ID= ENSG00000050820.16 TPM= 27.79 Transcript Type= NA
chr16	75229037	75240875	75229037	75240875	-	transcript4050.chr16.nic@BCAR1	transcript4050.chr16.nic	protein_coding	75237183,75236882,75234889,75233846,75229037	75240875,75236998,75235986,75233935,75230023	Gene ID= ENSG00000050820.16 TPM= 16.87 Transcript Type= NA
chr16	75229037	75251666	75229037	75251666	-	transcript4051.chr16.nnic@BCAR1	transcript4051.chr16.nnic	protein_coding	75251471,75242470,75234889,75233846,75229037	75251666,75243090,75235986,75233935,75230023	Gene ID= ENSG00000050820.16 TPM= 16.16 Transcript Type= NA
chr16	75229030	75251609	75229030	75251609	-	ENST00000162330.9@BCAR1	ENST00000162330.9	protein_coding	75251471,75242470,75237183,75236882,75234889,75233846,75229030	75251609,75243090,75237344,75236998,75235986,75233935,75230023	Gene ID= ENSG00000050820.16 TPM= 74.63 Transcript Type= protein_coding
chr16	75229103	75266007	75229103	75266007	-	ENST00000538440.6@BCAR1	ENST00000538440.6	protein_coding	75265825,75242470,75237183,75236882,75234889,75233846,75229103	75266007,75243090,75237344,75236998,75235986,75233935,75230023	Gene ID= ENSG00000050820.16 TPM= 3.88 Transcript Type= protein_coding
chr16	75245994	75250077	75245994	75250077	-	ENST00000624205.1@AC009078.3	ENST00000624205.1	TEC	75245994	75250077	Gene ID= ENSG00000280152.1 TPM= 10.62 Transcript Type= TEC
chr16	75293710	75433485	75293710	75433485	-	ENST00000283882.3@CFDP1	ENST00000283882.3	protein_coding	75433289,75414578,75412535,75411825,75395090,75305024,75293710	75433485,75414695,75412754,75411952,75395209,75305182,75294042	Gene ID= ENSG00000153774.8 TPM= 40.36 Transcript Type= protein_coding
chr16	75445714	75464416	75445714	75464416	-	ENST00000569540.5@TMEM170A	ENST00000569540.5	protein_coding	75464232,75451669,75445714	75464416,75451839,75447688	Gene ID= ENSG00000166822.12 TPM= 2.12 Transcript Type= protein_coding
chr16	75447019	75464698	75447019	75464698	-	ENST00000561878.1@TMEM170A	ENST00000561878.1	protein_coding	75464468,75451669,75447019	75464698,75451839,75447688	Gene ID= ENSG00000166822.12 TPM= 3.19 Transcript Type= protein_coding
chr16	75529968	75534063	75529968	75534063	-	transcript4071.chr16.nic@AC009163.2	transcript4071.chr16.nic	protein_coding	75531576,75529968	75534063,75530337	Gene ID= ENSG00000260092.1 TPM= 2.12 Transcript Type= NA
chr16	75536744	75556286	75536744	75556286	-	ENST00000258173.10@TMEM231	ENST00000258173.10	protein_coding	75556071,75555804,75545826,75545352,75542602,75541350,75536744	75556286,75555973,75545954,75545495,75542683,75541455,75540174	Gene ID= ENSG00000205084.10 TPM= 7.44 Transcript Type= protein_coding
chr16	75538136	75556268	75538136	75556268	-	ENST00000562410.5@TMEM231	ENST00000562410.5	protein_coding	75556071,75555804,75545826,75545352,75542602,75541350,75538136	75556268,75555973,75546077,75545495,75542683,75541455,75540174	Gene ID= ENSG00000205084.10 TPM= 1.06 Transcript Type= nonsense_mediated_decay
chr16	75556392	75557059	75556392	75557059	+	ENST00000621911.1@AC025287.2	ENST00000621911.1	lincRNA	75556392	75557059	Gene ID= ENSG00000276408.1 TPM= 1.06 Transcript Type= lincRNA
chr16	75566351	75577881	75566351	75577881	+	ENST00000037243.6@GABARAPL2	ENST00000037243.6	protein_coding	75566351,75566852,75568037,75577279	75566520,75566907,75568209,75577881	Gene ID= ENSG00000034713.7 TPM= 259.7 Transcript Type= protein_coding
chr16	75566389	75577881	75566389	75577881	+	ENST00000563744.1@GABARAPL2	ENST00000563744.1	protein_coding	75566389,75566852,75577279	75566520,75566907,75577881	Gene ID= ENSG00000034713.7 TPM= 6.9 Transcript Type= protein_coding
chr16	75593477	75595869	75593477	75595869	+	transcript4090.chr16.nnic@NA	transcript4090.chr16.nnic	NA	75593477	75595869	Gene ID= novel_gene_chr16_4091 TPM= 2.12 Transcript Type= NA
chr16	75596863	75598494	75596863	75598494	-	transcript4092.chr16.nnic@NA	transcript4092.chr16.nnic	NA	75596863	75598494	Gene ID= novel_gene_chr16_4093 TPM= 4.25 Transcript Type= NA
chr16	75599100	75623275	75599100	75623275	-	transcript4088.chr16.nic@ADAT1	transcript4088.chr16.nic	protein_coding	75622403,75620631,75620266,75618586,75617142,75612243,75608843,75608224,75603085,75599100	75623275,75620820,75620334,75618640,75617272,75612861,75608988,75608323,75603171,75600348	Gene ID= ENSG00000065457.10 TPM= 9.56 Transcript Type= NA
chr16	75599100	75622466	75599100	75622466	-	ENST00000566445.5@ADAT1	ENST00000566445.5	protein_coding	75622403,75620631,75620266,75618586,75617142,75612243,75608843,75608224,75603085,75599100	75622466,75620820,75620334,75618698,75617272,75612861,75608988,75608323,75603171,75600348	Gene ID= ENSG00000065457.10 TPM= 2.12 Transcript Type= nonsense_mediated_decay
chr16	75627724	75648650	75627724	75648650	-	transcript4101.chr16.nic@KARS	transcript4101.chr16.nic	protein_coding	75648468,75641564,75640184,75636454,75635912,75635680,75634173,75631693,75631416,75631168,75630423,75629415,75628569,75627724	75648650,75641723,75640349,75636547,75636098,75635805,75634292,75631855,75631589,75631253,75630508,75629541,75628712,75627993	Gene ID= ENSG00000065427.14 TPM= 8.5 Transcript Type= NA
chr16	75627724	75647679	75627724	75647679	-	ENST00000302445.7@KARS	ENST00000302445.7	protein_coding	75647578,75641564,75640184,75636454,75635912,75635680,75634173,75631693,75631416,75631168,75630423,75629415,75628569,75627724	75647679,75641723,75640349,75636547,75636098,75635805,75634292,75631855,75631589,75631253,75630508,75629541,75628712,75627993	Gene ID= ENSG00000065427.14 TPM= 112.59 Transcript Type= protein_coding
chr16	75627770	75647648	75627770	75647648	-	ENST00000564578.5@KARS	ENST00000564578.5	protein_coding	75647578,75644283,75641564,75636454,75635912,75635680,75634173,75631693,75631416,75631168,75630423,75629415,75628569,75627770	75647648,75644462,75641723,75636547,75636098,75635805,75634292,75631855,75631589,75631253,75630508,75629541,75628712,75627993	Gene ID= ENSG00000065427.14 TPM= 1.06 Transcript Type= nonsense_mediated_decay
chr16	75647786	75657432	75647786	75657432	+	ENST00000300086.4@TERF2IP	ENST00000300086.4	protein_coding	75647786,75654273,75656207	75648552,75654397,75657432	Gene ID= ENSG00000166848.5 TPM= 175.26 Transcript Type= protein_coding
chr16	75647789	75651699	75647789	75651699	+	transcript4112.chr16.nnic@NA	transcript4112.chr16.nnic	NA	75647789	75651699	Gene ID= novel_gene_chr16_4113 TPM= 3.19 Transcript Type= NA
chr16	77190919	77202405	77190919	77202405	+	ENST00000248248.7@MON1B	ENST00000248248.7	protein_coding	77190919,77191476,77193451,77194335,77195535,77198108	77191258,77191633,77193777,77195154,77195682,77202405	Gene ID= ENSG00000103111.14 TPM= 9.56 Transcript Type= protein_coding
chr16	77212408	77213215	77212408	77213215	+	ENST00000568925.1@SYCE1L	ENST00000568925.1	protein_coding	77212408,77212857	77212646,77213215	Gene ID= ENSG00000205078.5 TPM= 1.06 Transcript Type= retained_intron
chr16	77212284	77213001	77212284	77213001	+	transcript4130.chr16.nnic@NA	transcript4130.chr16.nnic	NA	77212284	77213001	Gene ID= novel_gene_chr16_4131 TPM= 2.12 Transcript Type= NA
chr16	77722485	77742257	77722485	77742257	+	transcript4132.chr16.nnic@NUDT7	transcript4132.chr16.nnic	protein_coding	77722485,77725431,77735394,77735828,77736650,77737394,77741582	77722617,77725584,77735507,77735986,77736743,77737453,77742257	Gene ID= ENSG00000140876.11 TPM= 2.12 Transcript Type= NA
chr16	77722485	77742257	77722485	77742257	+	transcript4134.chr16.nnic@NUDT7	transcript4134.chr16.nnic	protein_coding	77722485,77725431,77735394,77735828,77736650,77741582	77722617,77725584,77735507,77735986,77736743,77742257	Gene ID= ENSG00000140876.11 TPM= 4.51 Transcript Type= NA
chr16	77722485	77742257	77722485	77742257	+	transcript4136.chr16.nnic@NUDT7	transcript4136.chr16.nnic	protein_coding	77722485,77725431,77735828,77736650,77737394,77741582	77722617,77725584,77735986,77736743,77737453,77742257	Gene ID= ENSG00000140876.11 TPM= 17.26 Transcript Type= NA
chr16	77722485	77742257	77722485	77742257	+	transcript4141.chr16.nic@NUDT7	transcript4141.chr16.nic	protein_coding	77722485,77725431,77735828,77736650,77741582	77722617,77725584,77735986,77737453,77742257	Gene ID= ENSG00000140876.11 TPM= 2.12 Transcript Type= NA
chr16	77722515	77742141	77722515	77742141	+	transcript4142.chr16.nnic@NUDT7	transcript4142.chr16.nnic	protein_coding	77722515,77735828,77736650,77737394,77741582	77722617,77735986,77736743,77737453,77742141	Gene ID= ENSG00000140876.11 TPM= 2.12 Transcript Type= NA
chr16	77722519	77742258	77722519	77742258	+	ENST00000437314.3@NUDT7	ENST00000437314.3	protein_coding	77722519,77725431,77741582	77722617,77725584,77742258	Gene ID= ENSG00000140876.11 TPM= 21.51 Transcript Type= protein_coding
chr16	77722514	77742260	77722514	77742260	+	ENST00000268533.9@NUDT7	ENST00000268533.9	protein_coding	77722514,77725431,77735828,77741582	77722617,77725584,77735986,77742260	Gene ID= ENSG00000140876.11 TPM= 6.64 Transcript Type= protein_coding
chr16	77788530	77980107	77788530	77980107	+	ENST00000302536.2@VAT1L	ENST00000302536.2	protein_coding	77788530,77816921,77825246,77862748,77876370,77879169,77884608,77971850,77977597	77788915,77817050,77825461,77862890,77876473,77879224,77884802,77971933,77980107	Gene ID= ENSG00000171724.2 TPM= 98.78 Transcript Type= protein_coding
chr16	77805867	77809281	77805867	77809281	-	transcript4154.chr16.nnic@NA	transcript4154.chr16.nnic	NA	77805867	77809281	Gene ID= novel_gene_chr16_4155 TPM= 4.25 Transcript Type= NA
chr16	78501195	78503398	78501195	78503398	-	transcript4158.chr16.nnic@NA	transcript4158.chr16.nnic	NA	78501195	78503398	Gene ID= novel_gene_chr16_4159 TPM= 2.12 Transcript Type= NA
chr16	79593838	79600714	79593838	79600714	-	ENST00000326043.4@MAF	ENST00000326043.4	protein_coding	79598785,79593838	79600714,79594553	Gene ID= ENSG00000178573.6 TPM= 3.19 Transcript Type= protein_coding
chr16	79596638	79598742	79596638	79598742	-	transcript4163.chr16.nnic@NA	transcript4163.chr16.nnic	NA	79596638	79598742	Gene ID= novel_gene_chr16_4164 TPM= 5.31 Transcript Type= NA
chr16	80975802	81006909	80975802	81006909	-	transcript4181.chr16.nic@CMC2	transcript4181.chr16.nic	protein_coding	81006734,80997314,80981806,80980770,80975802	81006909,80997429,80981877,80980879,80976179	Gene ID= ENSG00000103121.8 TPM= 46.74 Transcript Type= NA
chr16	80966448	81007114	80966448	81007114	-	ENST00000219400.7@CMC2	ENST00000219400.7	protein_coding	81006734,80997314,80981806,80966448	81007114,80997429,80981877,80976179	Gene ID= ENSG00000103121.8 TPM= 74.35 Transcript Type= protein_coding
chr16	80975802	81006884	80975802	81006884	-	transcript4191.chr16.nnic@CMC2	transcript4191.chr16.nnic	protein_coding	81006734,80980770,80975802	81006884,80980879,80976179	Gene ID= ENSG00000103121.8 TPM= 4.25 Transcript Type= NA
chr16	80975804	81006897	80975804	81006897	-	ENST00000569187.5@CMC2	ENST00000569187.5	protein_coding	81006734,80981806,80975804	81006897,80981877,80976179	Gene ID= ENSG00000103121.8 TPM= 5.31 Transcript Type= processed_transcript
chr16	80975802	81006897	80975802	81006897	-	transcript4194.chr16.nnic@CMC2	transcript4194.chr16.nnic	protein_coding	81006734,80975802	81006897,80976179	Gene ID= ENSG00000103121.8 TPM= 20.18 Transcript Type= NA
chr16	80975802	81006895	80975802	81006895	-	ENST00000486645.5@CMC2	ENST00000486645.5	protein_coding	81006734,80997314,80980770,80975802	81006895,80997429,80980879,80976179	Gene ID= ENSG00000103121.8 TPM= 1.06 Transcript Type= protein_coding
chr16	81006498	81029322	81006498	81029322	+	ENST00000305850.9@CENPN	ENST00000305850.9	protein_coding	81006498,81011930,81014136,81017326,81017758,81020100,81022597,81024715,81026526,81028171,81028569	81007277,81012110,81014181,81017385,81017834,81020276,81022698,81024778,81026638,81028297,81029322	Gene ID= ENSG00000166451.13 TPM= 2.12 Transcript Type= protein_coding
chr16	81035818	81045173	81035818	81045173	+	transcript4195.chr16.nnic@ATMIN	transcript4195.chr16.nnic	protein_coding	81035818,81035967,81041356,81042281,81043161	81035876,81036206,81041481,81042480,81045173	Gene ID= ENSG00000166454.9 TPM= 5.31 Transcript Type= NA
chr16	81035847	81047358	81035847	81047358	+	ENST00000299575.4@ATMIN	ENST00000299575.4	protein_coding	81035847,81041356,81042281,81043161	81036206,81041481,81042480,81047358	Gene ID= ENSG00000166454.9 TPM= 9.56 Transcript Type= protein_coding
chr16	81081938	81096425	81081938	81096425	-	ENST00000315467.8@GCSH	ENST00000315467.8	protein_coding	81096131,81090601,81087601,81084463,81081938	81096425,81090680,81087664,81084594,81082963	Gene ID= ENSG00000140905.10 TPM= 16.99 Transcript Type= protein_coding
chr16	81170289	81181329	81170289	81181329	-	ENST00000531391.5@PKD1L2	ENST00000531391.5	polymorphic_pseudogene	81181151,81179645,81177807,81175605,81174720,81170943,81170289	81181329,81179786,81177983,81175750,81174914,81171074,81170805	Gene ID= ENSG00000166473.17 TPM= 1.06 Transcript Type= protein_coding
chr16	81314962	81380176	81314962	81380176	+	transcript4217.chr16.nnic@GAN	transcript4217.chr16.nnic	protein_coding	81314962,81354405,81356785,81357810,81362499,81363794,81364974,81365350,81377219,81377415	81315280,81354755,81357002,81357931,81362611,81363943,81365110,81365478,81377328,81380176	Gene ID= ENSG00000261609.5 TPM= 2.12 Transcript Type= NA
chr16	81447238	81449669	81447238	81449669	-	transcript4220.chr16.nnic@NA	transcript4220.chr16.nnic	NA	81447238	81449669	Gene ID= novel_gene_chr16_4221 TPM= 3.19 Transcript Type= NA
chr16	81481882	81485636	81481882	81485636	-	transcript4222.chr16.nnic@NA	transcript4222.chr16.nnic	NA	81481882	81485636	Gene ID= novel_gene_chr16_4223 TPM= 2.12 Transcript Type= NA
chr16	81779258	81962693	81779258	81962693	+	ENST00000564138.5@PLCG2	ENST00000564138.5	protein_coding	81779258,81785943,81854444,81858263,81859116,81869214,81870852,81880910,81883269,81889172,81891472,81893709,81895807,81900612,81905403,81907685,81908416,81910520,81912597,81919484,81921198,81923485,81927082,81928558,81931497,81934429,81936169,81937758,81938801,81939892,81946175,81956695,81957956	81779424,81786182,81854587,81858356,81859163,81869298,81870935,81880953,81883341,81889273,81891590,81893794,81895927,81900780,81905507,81907774,81908591,81910720,81912716,81919664,81921269,81923594,81927178,81928624,81931654,81934531,81936378,81937903,81938915,81940059,81946263,81956879,81962693	Gene ID= ENSG00000197943.9 TPM= 4.25 Transcript Type= protein_coding
chr16	81988855	82011488	81988855	82011488	-	ENST00000328945.6@SDR42E1	ENST00000328945.6	protein_coding	82011387,82000791,81988855	82011488,82000884,82000224	Gene ID= ENSG00000184860.9 TPM= 1.06 Transcript Type= protein_coding
chr16	82148162	82170226	82148162	82170226	-	ENST00000258169.8@MPHOSPH6	ENST00000258169.8	protein_coding	82170125,82164082,82151424,82149309,82148162	82170226,82164194,82151514,82149403,82148863	Gene ID= ENSG00000135698.9 TPM= 12.75 Transcript Type= protein_coding
chr16	82163876	82170197	82163876	82170197	-	ENST00000569021.1@MPHOSPH6	ENST00000569021.1	protein_coding	82170125,82163876	82170197,82164194	Gene ID= ENSG00000135698.9 TPM= 1.06 Transcript Type= protein_coding
chr16	82637430	82641193	82637430	82641193	-	transcript4236.chr16.nnic@NA	transcript4236.chr16.nnic	NA	82637430	82641193	Gene ID= novel_gene_chr16_4237 TPM= 9.56 Transcript Type= NA
chr16	82657688	82660945	82657688	82660945	+	transcript4234.chr16.nnic@NA	transcript4234.chr16.nnic	NA	82657688	82660945	Gene ID= novel_gene_chr16_4235 TPM= 2.12 Transcript Type= NA
chr16	82764817	82767546	82764817	82767546	-	transcript4246.chr16.nnic@NA	transcript4246.chr16.nnic	NA	82764817	82767546	Gene ID= novel_gene_chr16_4247 TPM= 4.25 Transcript Type= NA
chr16	83036145	83039732	83036145	83039732	-	transcript4248.chr16.nnic@NA	transcript4248.chr16.nnic	NA	83036145	83039732	Gene ID= novel_gene_chr16_4249 TPM= 6.37 Transcript Type= NA
chr16	83382918	83388300	83382918	83388300	+	transcript4242.chr16.nnic@NA	transcript4242.chr16.nnic	NA	83382918	83388300	Gene ID= novel_gene_chr16_4243 TPM= 2.12 Transcript Type= NA
chr16	83471277	83472040	83471277	83472040	-	transcript4250.chr16.nnic@NA	transcript4250.chr16.nnic	NA	83471277	83472040	Gene ID= novel_gene_chr16_4251 TPM= 2.12 Transcript Type= NA
chr16	83565385	83567908	83565385	83567908	-	transcript4252.chr16.nnic@NA	transcript4252.chr16.nnic	NA	83565385	83567908	Gene ID= novel_gene_chr16_4253 TPM= 4.25 Transcript Type= NA
chr16	83786786	83790375	83786786	83790375	+	transcript4244.chr16.nnic@NA	transcript4244.chr16.nnic	NA	83786786	83790375	Gene ID= novel_gene_chr16_4245 TPM= 2.12 Transcript Type= NA
chr16	83807843	83819737	83807843	83819737	+	ENST00000433866.6@HSBP1	ENST00000433866.6	protein_coding	83807843,83808680,83809305,83811421	83808121,83808746,83809425,83819737	Gene ID= ENSG00000230989.6 TPM= 129.58 Transcript Type= protein_coding
chr16	83899071	83916174	83899071	83916174	+	transcript4260.chr16.nnic@MLYCD	transcript4260.chr16.nnic	protein_coding	83899071,83906987,83908126,83912150,83914956	83899672,83907099,83908282,83912367,83916174	Gene ID= ENSG00000103150.5 TPM= 8.76 Transcript Type= NA
chr16	83899130	83945678	83899130	83945678	+	transcript4263.chr16.nnic@MLYCD	transcript4263.chr16.nnic	protein_coding	83899130,83906987,83908126,83912218,83945232	83899672,83907099,83908282,83912367,83945678	Gene ID= ENSG00000103150.5 TPM= 7.7 Transcript Type= NA
chr16	83899126	83927026	83899126	83927026	+	ENST00000262430.5@MLYCD	ENST00000262430.5	protein_coding	83899126,83906987,83908126,83912218,83914956	83899672,83907099,83908282,83912367,83927026	Gene ID= ENSG00000103150.5 TPM= 3.45 Transcript Type= protein_coding
chr16	83953222	83966332	83953222	83966332	+	ENST00000393306.5@OSGIN1	ENST00000393306.5	protein_coding	83953222,83957640,83959260,83960569,83960981,83965062	83953370,83957738,83959396,83960760,83961072,83966332	Gene ID= ENSG00000140961.12 TPM= 13.81 Transcript Type= protein_coding
chr16	83968632	84002776	83968632	84002776	+	ENST00000305202.8@NECAB2	ENST00000305202.8	protein_coding	83968632,83972151,83978444,83980839,83981030,83990494,83994302,83994609,83997216,83998205,84000724,84001825,84002318	83968849,83972175,83978552,83980864,83981127,83990630,83994420,83994688,83997269,83998317,84000801,84001916,84002776	Gene ID= ENSG00000103154.9 TPM= 4.25 Transcript Type= protein_coding
chr16	84053766	84116906	84053766	84116906	-	ENST00000343411.7@MBTPS1	ENST00000343411.7	protein_coding	84116735,84101621,84099053,84095602,84093711,84093188,84091732,84090875,84087358,84084983,84081747,84074597,84070588,84069866,84068339,84067667,84066489,84065690,84063305,84060682,84059302,84056005,84053766	84116906,84102107,84099310,84095805,84093821,84093297,84091848,84090942,84087460,84085134,84081908,84074741,84070776,84070038,84068454,84067823,84066613,84065767,84063445,84060813,84059428,84056135,84054645	Gene ID= ENSG00000140943.16 TPM= 48.86 Transcript Type= protein_coding
chr16	84117051	84117571	84117051	84117571	+	ENST00000565382.1@AC040169.1	ENST00000565382.1	antisense_RNA	84117051	84117571	Gene ID= ENSG00000260018.1 TPM= 2.12 Transcript Type= antisense_RNA
chr16	84122281	84145188	84122281	84145188	-	ENST00000219439.8@HSDL1	ENST00000219439.8	protein_coding	84145080,84135544,84131102,84129986,84129548,84122281	84145188,84135605,84131327,84130431,84129775,84124728	Gene ID= ENSG00000103160.11 TPM= 8.5 Transcript Type= protein_coding
chr16	84177854	84187020	84177854	84187020	-	ENST00000564774.5@TAF1C	ENST00000564774.5	protein_coding	84186901,84184851,84183697,84183410,84183244,84183076,84182202,84181942,84181746,84181328,84180170,84179946,84177854	84187020,84185060,84183778,84183507,84183333,84183149,84182440,84182058,84181863,84181663,84181186,84180083,84179851	Gene ID= ENSG00000103168.16 TPM= 12.21 Transcript Type= retained_intron
chr16	84177852	84187049	84177852	84187049	-	ENST00000341690.10@TAF1C	ENST00000341690.10	protein_coding	84186901,84184851,84183697,84183410,84183244,84183076,84182202,84181942,84181746,84181592,84181328,84181043,84180170,84179946,84177852	84187049,84184899,84183778,84183507,84183333,84183149,84182440,84182058,84181863,84181663,84181463,84181186,84180344,84180080,84179851	Gene ID= ENSG00000103168.16 TPM= 7.97 Transcript Type= protein_coding
chr16	84294646	84329851	84294646	84329851	+	ENST00000219454.9@WFDC1	ENST00000219454.9	protein_coding	84294646,84312961,84318272,84319431,84324419,84326882,84329322	84295115,84313153,84318355,84319571,84324460,84326955,84329851	Gene ID= ENSG00000103175.10 TPM= 2.12 Transcript Type= protein_coding
chr16	84478050	84504661	84478050	84504661	-	transcript4306.chr16.nnic@TLDC1	transcript4306.chr16.nnic	protein_coding	84504601,84497934,84495683,84489278,84486631,84482592,84480529,84479486,84478050	84504661,84498111,84495913,84489422,84487059,84482710,84480708,84480026,84479390	Gene ID= ENSG00000140950.15 TPM= 3.19 Transcript Type= NA
chr16	84476421	84504758	84476421	84504758	-	ENST00000343629.10@TLDC1	ENST00000343629.10	protein_coding	84504601,84497934,84495683,84489278,84486631,84482592,84480529,84476421	84504758,84498111,84495913,84489422,84487059,84482710,84480708,84480026	Gene ID= ENSG00000140950.15 TPM= 1.06 Transcript Type= protein_coding
chr16	84565594	84618077	84565594	84618077	-	ENST00000262428.4@COTL1	ENST00000262428.4	protein_coding	84617838,84617501,84590105,84565594	84618077,84617583,84590262,84566955	Gene ID= ENSG00000103187.7 TPM= 21.24 Transcript Type= protein_coding
chr16	84648493	84662309	84648493	84662309	+	transcript4318.chr16.nic@KLHL36	transcript4318.chr16.nic	protein_coding	84648493,84650852,84656871,84659760,84661578	84648887,84650930,84657944,84659917,84662309	Gene ID= ENSG00000135686.12 TPM= 2.66 Transcript Type= NA
chr16	84648490	84658988	84648490	84658988	+	transcript4324.chr16.nic@KLHL36	transcript4324.chr16.nic	protein_coding	84648490,84650852,84656871	84648649,84650930,84658988	Gene ID= ENSG00000135686.12 TPM= 3.19 Transcript Type= NA
chr16	84648525	84662314	84648525	84662314	+	ENST00000564996.5@KLHL36	ENST00000564996.5	protein_coding	84648525,84650852,84656871,84659760,84661578	84648649,84650930,84657944,84659917,84662314	Gene ID= ENSG00000135686.12 TPM= 18.59 Transcript Type= protein_coding
chr16	84699978	84779581	84699978	84779581	+	ENST00000219473.11@USP10	ENST00000219473.11	protein_coding	84699978,84733435,84740309,84744633,84758716,84759363,84759891,84760172,84762989,84764086,84768193,84772541,84775160,84778895	84700111,84733503,84740369,84745673,84758807,84759472,84759946,84760275,84763088,84764263,84768358,84772685,84775225,84779581	Gene ID= ENSG00000103194.15 TPM= 12.75 Transcript Type= protein_coding
chr16	84699995	84779922	84699995	84779922	+	transcript4335.chr16.nnic@USP10	transcript4335.chr16.nnic	protein_coding	84699995,84758716,84759363,84759891,84760172,84762989,84764086,84768193,84772541,84775160,84778895	84700111,84758807,84759472,84759946,84760275,84763088,84764263,84768358,84772685,84775225,84779922	Gene ID= ENSG00000103194.15 TPM= 17.53 Transcript Type= NA
chr16	84727481	84730611	84727481	84730611	-	transcript4341.chr16.nnic@NA	transcript4341.chr16.nnic	NA	84730542,84730286,84727481	84730611,84730407,84729054	Gene ID= novel_gene_chr16_4342 TPM= 2.12 Transcript Type= NA
chr16	84776684	84779916	84776684	84779916	+	transcript4344.chr16.nnic@NA	transcript4344.chr16.nnic	NA	84776684	84779916	Gene ID= novel_gene_chr16_4345 TPM= 4.78 Transcript Type= NA
chr16	84819984	84909510	84819984	84909510	+	ENST00000262424.9@CRISPLD2	ENST00000262424.9	protein_coding	84819984,84838422,84845786,84849385,84850568,84854729,84866897,84868851,84872442,84872992,84873920,84877438,84880509,84889230,84906588	84820133,84838735,84845904,84849517,84850683,84854829,84867040,84868911,84872508,84873122,84873963,84877510,84880584,84889363,84909510	Gene ID= ENSG00000103196.11 TPM= 10.62 Transcript Type= protein_coding
chr16	84974181	85011535	84974181	85011535	-	ENST00000313732.8@ZDHHC7	ENST00000313732.8	protein_coding	85011286,84995922,84990304,84981870,84979189,84977924,84977095,84974181	85011535,84996007,84990635,84981994,84979285,84978005,84977225,84976519	Gene ID= ENSG00000153786.12 TPM= 40.36 Transcript Type= protein_coding
chr16	84999022	85001482	84999022	85001482	+	transcript4355.chr16.nnic@NA	transcript4355.chr16.nnic	NA	84999022	85001482	Gene ID= novel_gene_chr16_4356 TPM= 4.25 Transcript Type= NA
chr16	85169289	85359876	85169289	85359876	+	transcript4365.chr16.nic@GSE1	transcript4365.chr16.nic	protein_coding	85169289,85357463	85171807,85359876	Gene ID= ENSG00000131149.18 TPM= 6.9 Transcript Type= NA
chr16	85170594	85175122	85170594	85175122	+	transcript4366.chr16.nnic@NA	transcript4366.chr16.nnic	NA	85170594	85175122	Gene ID= novel_gene_chr16_4367 TPM= 5.84 Transcript Type= NA
chr16	85279518	85285698	85279518	85285698	+	transcript4368.chr16.nnic@NA	transcript4368.chr16.nnic	NA	85279518	85285698	Gene ID= novel_gene_chr16_4369 TPM= 4.25 Transcript Type= NA
chr16	85363786	85366742	85363786	85366742	+	transcript4370.chr16.nnic@NA	transcript4370.chr16.nnic	NA	85363786	85366742	Gene ID= novel_gene_chr16_4371 TPM= 3.19 Transcript Type= NA
chr16	85443984	85446944	85443984	85446944	-	transcript4377.chr16.nnic@NA	transcript4377.chr16.nnic	NA	85443984	85446944	Gene ID= novel_gene_chr16_4378 TPM= 9.56 Transcript Type= NA
chr16	85463518	85466684	85463518	85466684	+	transcript4373.chr16.nnic@NA	transcript4373.chr16.nnic	NA	85463518	85466684	Gene ID= novel_gene_chr16_4374 TPM= 2.12 Transcript Type= NA
chr16	85501649	85504596	85501649	85504596	+	transcript4375.chr16.nnic@NA	transcript4375.chr16.nnic	NA	85501649	85504596	Gene ID= novel_gene_chr16_4376 TPM= 3.19 Transcript Type= NA
chr16	85516800	85518899	85516800	85518899	-	transcript4379.chr16.nnic@NA	transcript4379.chr16.nnic	NA	85516800	85518899	Gene ID= novel_gene_chr16_4380 TPM= 6.37 Transcript Type= NA
chr16	85623217	85625218	85623217	85625218	-	transcript4386.chr16.nnic@NA	transcript4386.chr16.nnic	NA	85623217	85625218	Gene ID= novel_gene_chr16_4387 TPM= 3.19 Transcript Type= NA
chr16	85676198	85688999	85676198	85688999	-	ENST00000253462.7@GINS2	ENST00000253462.7	protein_coding	85688809,85687460,85681582,85678540,85676198	85688999,85687574,85681681,85678666,85678337	Gene ID= ENSG00000131153.8 TPM= 2.12 Transcript Type= protein_coding
chr16	85778624	85799540	85778624	85799540	-	ENST00000253457.7@EMC8	ENST00000253457.7	protein_coding	85799065,85788974,85781211,85780379,85778624	85799540,85789050,85781280,85780473,85779867	Gene ID= ENSG00000131148.8 TPM= 48.86 Transcript Type= protein_coding
chr16	85799697	85807002	85799697	85807002	+	ENST00000561569.5@COX4I1	ENST00000561569.5	protein_coding	85799697,85801184,85804937,85805733,85806738	85799752,85801278,85805104,85805864,85807002	Gene ID= ENSG00000131143.8 TPM= 62.43 Transcript Type= protein_coding
chr16	85799684	85807002	85799684	85807002	+	ENST00000253452.6@COX4I1	ENST00000253452.6	protein_coding	85799684,85801205,85804937,85805733,85806738	85799752,85801278,85805104,85805864,85807002	Gene ID= ENSG00000131143.8 TPM= 1708.08 Transcript Type= protein_coding
chr16	85799693	85807044	85799693	85807044	+	ENST00000562336.5@COX4I1	ENST00000562336.5	protein_coding	85799693,85801205,85804937,85805733,85806738	85799884,85801278,85805104,85805864,85807044	Gene ID= ENSG00000131143.8 TPM= 61.02 Transcript Type= protein_coding
chr16	85898803	85922609	85898803	85922609	+	ENST00000268638.9@IRF8	ENST00000268638.9	protein_coding	85898803,85903015,85908990,85911570,85913131,85914473,85918417,85920109,85921106	85899223,85903189,85909173,85911658,85913236,85914520,85918803,85920224,85922609	Gene ID= ENSG00000140968.10 TPM= 7.44 Transcript Type= protein_coding
chr16	86510527	86515418	86510527	86515418	+	ENST00000262426.5@FOXF1	ENST00000262426.5	protein_coding	86510527,86512925	86511548,86515418	Gene ID= ENSG00000103241.6 TPM= 1.06 Transcript Type= protein_coding
chr16	86530176	86555210	86530176	86555210	-	ENST00000360900.10@MTHFSD	ENST00000360900.10	protein_coding	86555169,86554645,86552033,86548464,86546559,86542101,86541697,86530176	86555210,86554751,86552146,86548577,86546649,86542213,86541822,86532481	Gene ID= ENSG00000103248.18 TPM= 9.56 Transcript Type= protein_coding
chr16	86566830	86569725	86566830	86569725	+	transcript4423.chr16.nnic@NA	transcript4423.chr16.nnic	NA	86566830	86569725	Gene ID= novel_gene_chr16_4424 TPM= 5.31 Transcript Type= NA
chr16	87302801	87317420	87302801	87317420	-	ENST00000618367.4@C16orf95	ENST00000618367.4	protein_coding	87317087,87315772,87314971,87305719,87302801	87317420,87315823,87315096,87305905,87303075	Gene ID= ENSG00000260456.6 TPM= 2.47 Transcript Type= protein_coding
chr16	87302814	87317416	87302814	87317416	-	ENST00000253461.8@C16orf95	ENST00000253461.8	protein_coding	87317091,87315772,87314971,87305719,87302814	87317416,87315823,87315096,87305905,87303075	Gene ID= ENSG00000260456.6 TPM= 2.47 Transcript Type= protein_coding
chr16	87302814	87383791	87302814	87383791	-	transcript4425.chr16.nic@FBXO31	transcript4425.chr16.nic	protein_coding	87383405,87360295,87358411,87347174,87343598,87342877,87336155,87335304,87333886,87315772,87314971,87305719,87302814	87383791,87360366,87358497,87347250,87343765,87342951,87336264,87335457,87334286,87315823,87315096,87305905,87303075	Gene ID= ENSG00000103264.17 TPM= 4.96 Transcript Type= NA
chr16	87329336	87383791	87329336	87383791	-	transcript4429.chr16.nic@FBXO31	transcript4429.chr16.nic	protein_coding	87383405,87360295,87358411,87347174,87343598,87342877,87336155,87335304,87333886,87329336	87383791,87360366,87358497,87347250,87343765,87342951,87336264,87335457,87334286,87331510	Gene ID= ENSG00000103264.17 TPM= 35.4 Transcript Type= NA
chr16	87329339	87383791	87329339	87383791	-	transcript4431.chr16.nnic@FBXO31	transcript4431.chr16.nnic	protein_coding	87383405,87360295,87358411,87347174,87343598,87342877,87336155,87335304,87334167,87329339	87383791,87360366,87358497,87347250,87343765,87342951,87336264,87335457,87334286,87331510	Gene ID= ENSG00000103264.17 TPM= 12.03 Transcript Type= NA
chr16	87326987	87383757	87326987	87383757	-	ENST00000311635.11@FBXO31	ENST00000311635.11	protein_coding	87383405,87360295,87347174,87343598,87342877,87336155,87335304,87333886,87326987	87383757,87360366,87347250,87343765,87342951,87336264,87335457,87334286,87331510	Gene ID= ENSG00000103264.17 TPM= 9.56 Transcript Type= protein_coding
chr16	87317824	87322125	87317824	87322125	-	transcript4436.chr16.nnic@NA	transcript4436.chr16.nnic	NA	87317824	87322125	Gene ID= novel_gene_chr16_4437 TPM= 2.12 Transcript Type= NA
chr16	87392282	87404768	87392282	87404768	+	transcript4438.chr16.nnic@MAP1LC3B	transcript4438.chr16.nnic	protein_coding	87392282,87398815,87402175,87402923,87403860	87392467,87398870,87402281,87403087,87404768	Gene ID= ENSG00000140941.12 TPM= 18.06 Transcript Type= NA
chr16	87391800	87404779	87391800	87404779	+	ENST00000268607.9@MAP1LC3B	ENST00000268607.9	protein_coding	87391800,87398815,87402175,87402923	87392467,87398870,87402281,87404779	Gene ID= ENSG00000140941.12 TPM= 346.26 Transcript Type= protein_coding
chr16	87406245	87411091	87406245	87411091	-	transcript4445.chr16.nnic@NA	transcript4445.chr16.nnic	NA	87406245	87411091	Gene ID= novel_gene_chr16_4446 TPM= 7.44 Transcript Type= NA
chr16	87452586	87455288	87452586	87455288	+	transcript4447.chr16.nnic@NA	transcript4447.chr16.nnic	NA	87452586	87455288	Gene ID= novel_gene_chr16_4448 TPM= 2.12 Transcript Type= NA
chr16	87707812	87765991	87707812	87765991	-	transcript4450.chr16.nic@KLHDC4	transcript4450.chr16.nic	protein_coding	87765792,87761949,87756399,87755194,87748673,87730552,87726765,87714498,87711235,87709265,87708350,87707812	87765991,87762040,87756477,87755292,87748809,87730644,87726924,87714573,87711443,87709667,87708466,87708072	Gene ID= ENSG00000104731.13 TPM= 4.25 Transcript Type= NA
chr16	87707813	87765949	87707813	87765949	-	ENST00000270583.9@KLHDC4	ENST00000270583.9	protein_coding	87765792,87761949,87756399,87755194,87748673,87730552,87726765,87714498,87711235,87709265,87708350,87707813	87765949,87762040,87756477,87755292,87748809,87730644,87726924,87714573,87711443,87709667,87708466,87708075	Gene ID= ENSG00000104731.13 TPM= 10.62 Transcript Type= protein_coding
chr16	87951432	88077317	87951432	88077317	+	ENST00000286122.11@BANP	ENST00000286122.11	protein_coding	87951432,87975048,87981036,87984084,88004295,88006090,88018428,88027483,88033109,88035332,88037973,88065267,88072069,88076590	87951515,87975185,87981127,87984259,88004411,88006265,88018667,88027650,88033245,88035394,88038011,88065332,88072212,88077317	Gene ID= ENSG00000172530.20 TPM= 2.88 Transcript Type= protein_coding
chr16	87951483	88077317	87951483	88077317	+	transcript4461.chr16.nic@BANP	transcript4461.chr16.nic	protein_coding	87951483,87975048,87981036,87984060,88004295,88006090,88018428,88027483,88033109,88035323,88037973,88072069,88076590	87951515,87975185,87981127,87984259,88004411,88006265,88018667,88027650,88033245,88035394,88038011,88072212,88077317	Gene ID= ENSG00000172530.20 TPM= 2.88 Transcript Type= NA
chr16	87951434	88077318	87951434	88077318	+	ENST00000393208.6@BANP	ENST00000393208.6	protein_coding	87951434,87975048,87981036,87984060,88006090,88018428,88027483,88033109,88035323,88037973,88065267,88072069,88076590	87951515,87975185,87981127,87984259,88006265,88018667,88027650,88033245,88035394,88038011,88065332,88072212,88077318	Gene ID= ENSG00000172530.20 TPM= 6.06 Transcript Type= protein_coding
chr16	87951432	88077317	87951432	88077317	+	transcript4466.chr16.nic@BANP	transcript4466.chr16.nic	protein_coding	87951432,87975048,87981036,87984060,88006090,88018428,88027483,88033109,88035332,88037973,88072069,88076590	87951515,87975207,87981127,87984259,88006265,88018667,88027650,88033245,88035394,88038011,88072212,88077317	Gene ID= ENSG00000172530.20 TPM= 2.88 Transcript Type= NA
chr16	87951432	88077317	87951432	88077317	+	transcript4470.chr16.nnic@BANP	transcript4470.chr16.nnic	protein_coding	87951432,87981036,87984060,88006090,88018428,88027483,88033109,88035332,88037973,88065267,88072069,88076590	87951515,87981127,87984259,88006265,88018667,88027650,88033245,88035394,88038011,88065332,88072212,88077317	Gene ID= ENSG00000172530.20 TPM= 3.94 Transcript Type= NA
chr16	87951487	88077318	87951487	88077318	+	ENST00000355022.8@BANP	ENST00000355022.8	protein_coding	87951487,87975048,87981036,87984060,88006090,88018428,88027483,88033109,88035323,88037973,88072069,88076590	87951515,87975185,87981127,87984259,88006265,88018667,88027650,88033245,88035394,88038011,88072212,88077318	Gene ID= ENSG00000172530.20 TPM= 2.88 Transcript Type= protein_coding
chr16	87951496	87952746	87951496	87952746	+	transcript4474.chr16.nnic@NA	transcript4474.chr16.nnic	NA	87951496	87952746	Gene ID= novel_gene_chr16_4475 TPM= 2.12 Transcript Type= NA
chr16	88260148	88261431	88260148	88261431	-	transcript4476.chr16.nnic@NA	transcript4476.chr16.nnic	NA	88260148	88261431	Gene ID= novel_gene_chr16_4477 TPM= 2.12 Transcript Type= NA
chr16	88534273	88535165	88534273	88535165	+	transcript4480.chr16.nnic@NA	transcript4480.chr16.nnic	NA	88534273	88535165	Gene ID= novel_gene_chr16_4481 TPM= 16.99 Transcript Type= NA
chr16	88570381	88631966	88570381	88631966	+	ENST00000301011.9@ZC3H18	ENST00000301011.9	protein_coding	88570381,88577110,88586600,88598178,88598620,88599791,88608934,88611268,88622197,88623219,88623958,88624602,88625202,88627622,88627920,88628758,88630485,88631101	88570566,88577726,88586684,88598326,88598712,88599948,88609051,88611536,88622388,88623344,88624062,88624745,88625267,88627782,88628119,88628854,88630581,88631966	Gene ID= ENSG00000158545.15 TPM= 35.05 Transcript Type= protein_coding
chr16	88570406	88612520	88570406	88612520	+	transcript4491.chr16.nic@ZC3H18	transcript4491.chr16.nic	protein_coding	88570406,88577110,88586600,88598178,88598620,88599791,88608934,88611268	88570566,88577726,88586684,88598326,88598712,88599948,88609051,88612520	Gene ID= ENSG00000158545.15 TPM= 3.19 Transcript Type= NA
chr16	88643283	88651152	88643283	88651152	-	ENST00000261623.7@CYBA	ENST00000261623.7	protein_coding	88650956,88648045,88647101,88646755,88646116,88643283	88651152,88648114,88647175,88646838,88646197,88643571	Gene ID= ENSG00000051523.10 TPM= 30.8 Transcript Type= protein_coding
chr16	88651935	88663153	88651935	88663153	-	transcript4500.chr16.nic@MVD	transcript4500.chr16.nic	protein_coding	88663011,88660748,88660520,88658650,88657915,88657436,88656105,88655656,88655199,88654692,88653300,88651935	88663153,88660841,88660637,88658720,88658029,88657582,88656304,88655730,88655417,88654807,88653408,88652605	Gene ID= ENSG00000167508.11 TPM= 15.22 Transcript Type= NA
chr16	88651935	88663145	88651935	88663145	-	transcript4503.chr16.nic@MVD	transcript4503.chr16.nic	protein_coding	88663011,88658650,88657436,88656105,88655656,88655199,88654692,88653300,88651935	88663145,88658720,88658029,88656304,88655730,88655417,88654807,88653408,88652605	Gene ID= ENSG00000167508.11 TPM= 6.72 Transcript Type= NA
chr16	88662102	88663161	88662102	88663161	-	ENST00000562741.1@MVD	ENST00000562741.1	protein_coding	88663011,88662102	88663161,88662167	Gene ID= ENSG00000167508.11 TPM= 3.19 Transcript Type= processed_transcript
chr16	88651935	88663110	88651935	88663110	-	ENST00000301012.7@MVD	ENST00000301012.7	protein_coding	88663011,88658650,88657915,88657436,88656105,88655656,88655199,88654692,88653300,88651935	88663110,88658720,88658029,88657582,88656304,88655730,88655417,88654807,88653408,88652605	Gene ID= ENSG00000167508.11 TPM= 51.33 Transcript Type= protein_coding
chr16	88663369	88672179	88663369	88672179	+	ENST00000569786.5@SNAI3-AS1	ENST00000569786.5	antisense_RNA	88663369,88671277,88671813	88663400,88671465,88672179	Gene ID= ENSG00000260630.6 TPM= 1.06 Transcript Type= antisense_RNA
chr16	88677682	88686493	88677682	88686493	-	ENST00000332281.5@SNAI3	ENST00000332281.5	protein_coding	88686331,88681094,88677682	88686493,88681714,88678629	Gene ID= ENSG00000185669.5 TPM= 4.25 Transcript Type= protein_coding
chr16	88683555	88685863	88683555	88685863	-	transcript4514.chr16.nnic@NA	transcript4514.chr16.nnic	NA	88683555	88685863	Gene ID= novel_gene_chr16_4515 TPM= 14.87 Transcript Type= NA
chr16	88696502	88706424	88696502	88706424	-	transcript4516.chr16.nnic@RNF166	transcript4516.chr16.nnic	protein_coding	88706171,88701262,88700784,88699620,88698971,88698502,88696502	88706424,88701418,88700940,88699732,88699085,88698609,88697633	Gene ID= ENSG00000158717.10 TPM= 15.93 Transcript Type= NA
chr16	88696495	88706421	88696495	88706421	-	ENST00000312838.8@RNF166	ENST00000312838.8	protein_coding	88706171,88701262,88699620,88698971,88698502,88696495	88706421,88701418,88699732,88699085,88698609,88697633	Gene ID= ENSG00000158717.10 TPM= 58.42 Transcript Type= protein_coding
chr16	88706463	88715386	88706463	88715386	+	ENST00000453996.6@CTU2	ENST00000453996.6	protein_coding	88706463,88707136,88709938,88710223,88711635,88712274,88712622,88713312,88713647,88714136,88714383,88714587,88714860,88715048,88715182	88706598,88707210,88710016,88710282,88711695,88712383,88712905,88713447,88713778,88714227,88714486,88714737,88714926,88715106,88715386	Gene ID= ENSG00000174177.12 TPM= 15.93 Transcript Type= protein_coding
chr16	88706483	88715386	88706483	88715386	+	ENST00000312060.9@CTU2	ENST00000312060.9	protein_coding	88706483,88707136,88709938,88710223,88711635,88712274,88712622,88713312,88713647,88714136,88714383,88714587,88714860,88715182	88706598,88707210,88710016,88710282,88711695,88712383,88712905,88713447,88713778,88714227,88714486,88714737,88714926,88715386	Gene ID= ENSG00000174177.12 TPM= 2.12 Transcript Type= protein_coding
chr16	88715346	88785211	88715346	88785211	-	ENST00000301015.13@PIEZO1	ENST00000301015.13	protein_coding	88784901,88749384,88742300,88742053,88741478,88738568,88738227,88737934,88737728,88737559,88736639,88736148,88735135,88734875,88734650,88734356,88733906,88733588,88733278,88732607,88732335,88731706,88727557,88727039,88726715,88726547,88726284,88725595,88725416,88725009,88723871,88723226,88723095,88722837,88722583,88722218,88721808,88721538,88721166,88720616,88720385,88720069,88719802,88719574,88717023,88716806,88716559,88716361,88716198,88715933,88715346	88785211,88749479,88742422,88742095,88741616,88738736,88738440,88738105,88737814,88737646,88736739,88736408,88735246,88735053,88734798,88734538,88734054,88733745,88733454,88732732,88732535,88731910,88727661,88727192,88726958,88726643,88726455,88725684,88725519,88725080,88723971,88723328,88723151,88723009,88722689,88722397,88722066,88721726,88721430,88720748,88720532,88720283,88719960,88719721,88717211,88716898,88716731,88716483,88716277,88716119,88715854	Gene ID= ENSG00000103335.21 TPM= 18.06 Transcript Type= protein_coding
chr16	88809339	88811944	88809339	88811944	-	ENST00000378364.7@APRT	ENST00000378364.7	protein_coding	88811820,88811550,88810423,88810070,88809339	88811944,88811656,88810556,88810148,88809840	Gene ID= ENSG00000198931.10 TPM= 3.19 Transcript Type= protein_coding
chr16	88809469	88811938	88809469	88811938	-	transcript4532.chr16.nic@APRT	transcript4532.chr16.nic	protein_coding	88811820,88810423,88810070,88809469	88811938,88811656,88810148,88809840	Gene ID= ENSG00000198931.10 TPM= 2.47 Transcript Type= NA
chr16	88809469	88811938	88809469	88811938	-	transcript4533.chr16.nic@APRT	transcript4533.chr16.nic	protein_coding	88811820,88810070,88809469	88811938,88811656,88809706	Gene ID= ENSG00000198931.10 TPM= 6.19 Transcript Type= NA
chr16	88809469	88811938	88809469	88811938	-	transcript4536.chr16.nic@APRT	transcript4536.chr16.nic	protein_coding	88811820,88810070,88809469	88811938,88811656,88809840	Gene ID= ENSG00000198931.10 TPM= 3.54 Transcript Type= NA
chr16	88809469	88811925	88809469	88811925	-	ENST00000426324.6@APRT	ENST00000426324.6	protein_coding	88811820,88811550,88810423,88810070,88809469	88811925,88811656,88810556,88810148,88809706	Gene ID= ENSG00000198931.10 TPM= 20.71 Transcript Type= protein_coding
chr16	88813734	88856966	88813734	88856966	-	ENST00000268695.9@GALNS	ENST00000268695.9	protein_coding	88856758,88842706,88841897,88840992,88837622,88836201,88835725,88835213,88831998,88826702,88824767,88822589,88818007,88813734	88856966,88842829,88841971,88841094,88837765,88836267,88835849,88835352,88832101,88826838,88824869,88822710,88818124,88814525	Gene ID= ENSG00000141012.12 TPM= 11.68 Transcript Type= protein_coding
chr16	88855128	88856970	88855128	88856970	-	ENST00000568311.1@GALNS	ENST00000568311.1	protein_coding	88856758,88856207,88855128	88856970,88856301,88855522	Gene ID= ENSG00000141012.12 TPM= 8.5 Transcript Type= protein_coding
chr16	88857086	88862686	88857086	88862686	+	ENST00000301021.7@TRAPPC2L	ENST00000301021.7	protein_coding	88857086,88858619,88859663,88859893,88860911	88857183,88858791,88859750,88859972,88862686	Gene ID= ENSG00000167515.10 TPM= 1.06 Transcript Type= protein_coding
chr16	88857085	88861112	88857085	88861112	+	transcript4558.chr16.nic@TRAPPC2L	transcript4558.chr16.nic	protein_coding	88857085,88858619,88859893,88860914	88857183,88859750,88859972,88861112	Gene ID= ENSG00000167515.10 TPM= 4.25 Transcript Type= NA
chr16	88857144	88861110	88857144	88861110	+	ENST00000564404.5@TRAPPC2L	ENST00000564404.5	protein_coding	88857144,88858619,88859345,88859893,88860893	88857183,88858789,88859750,88859972,88861110	Gene ID= ENSG00000167515.10 TPM= 3.19 Transcript Type= nonsense_mediated_decay
chr16	88857135	88861112	88857135	88861112	+	ENST00000567312.5@TRAPPC2L	ENST00000567312.5	protein_coding	88857135,88858619,88859893,88860914	88857183,88858789,88859972,88861112	Gene ID= ENSG00000167515.10 TPM= 4.25 Transcript Type= protein_coding
chr16	88939789	88951524	88939789	88951524	+	ENST00000378347.2@AC092384.1	ENST00000378347.2	antisense_RNA	88939789,88950257	88940332,88951524	Gene ID= ENSG00000205018.2 TPM= 2.12 Transcript Type= antisense_RNA
chr16	89093852	89152324	89093852	89152324	+	transcript4568.chr16.nnic@ACSF3	transcript4568.chr16.nnic	protein_coding	89093852,89098591,89100662,89102604,89112092,89114339,89120801,89133136,89145267,89145938,89151792	89093996,89098763,89101347,89102759,89112246,89114487,89120913,89133262,89145401,89146049,89152324	Gene ID= ENSG00000176715.15 TPM= 3.19 Transcript Type= NA
chr16	89093809	89155846	89093809	89155846	+	ENST00000614302.4@ACSF3	ENST00000614302.4	protein_coding	89093809,89098591,89100662,89102604,89112092,89114339,89120801,89133136,89145267,89145938,89154090	89093996,89098763,89101347,89102759,89112246,89114487,89120913,89133262,89145401,89146049,89155846	Gene ID= ENSG00000176715.15 TPM= 27.62 Transcript Type= protein_coding
chr16	89093852	89154588	89093852	89154588	+	transcript4571.chr16.nic@ACSF3	transcript4571.chr16.nic	protein_coding	89093852,89098591,89100662,89102604,89112092,89120801,89133136,89145267,89145938,89154090	89093996,89098763,89101347,89102759,89112246,89120913,89133262,89145401,89146049,89154588	Gene ID= ENSG00000176715.15 TPM= 2.47 Transcript Type= NA
chr16	89093898	89154588	89093898	89154588	+	ENST00000378345.8@ACSF3	ENST00000378345.8	protein_coding	89093898,89102604,89112092,89114339,89120801,89133136,89145267,89145938,89154090	89093992,89102759,89112246,89114487,89120913,89133262,89145401,89146049,89154588	Gene ID= ENSG00000176715.15 TPM= 2.47 Transcript Type= protein_coding
chr16	89093883	89154589	89093883	89154589	+	ENST00000406948.7@ACSF3	ENST00000406948.7	protein_coding	89093883,89100662,89102604,89112092,89114339,89120801,89133136,89145267,89145938,89154090	89093996,89101347,89102759,89112246,89114487,89120913,89133262,89145401,89146049,89154589	Gene ID= ENSG00000176715.15 TPM= 6.72 Transcript Type= protein_coding
chr16	89171767	89195492	89171767	89195492	+	ENST00000289746.2@CDH15	ENST00000289746.2	protein_coding	89171767,89179416,89180200,89183548,89185173,89187429,89188100,89190243,89191330,89191655,89192205,89193470,89193755,89194862	89171873,89179574,89180355,89183692,89185333,89187557,89188285,89190496,89191472,89191894,89192444,89193606,89193913,89195492	Gene ID= ENSG00000129910.7 TPM= 1.06 Transcript Type= protein_coding
chr16	89215211	89217653	89215211	89217653	-	ENST00000570267.2@AC009113.1	ENST00000570267.2	antisense_RNA	89215211	89217653	Gene ID= ENSG00000259877.2 TPM= 8.5 Transcript Type= antisense_RNA
chr16	89217703	89229557	89217703	89229557	+	ENST00000433976.6@ZNF778	ENST00000433976.6	protein_coding	89217703,89220997,89222092,89223157,89224719,89225555,89226694	89217910,89221152,89222183,89223283,89224802,89225631,89229557	Gene ID= ENSG00000170100.13 TPM= 1.06 Transcript Type= protein_coding
chr16	89230217	89232635	89230217	89232635	+	transcript4579.chr16.nnic@NA	transcript4579.chr16.nnic	NA	89230217	89232635	Gene ID= novel_gene_chr16_4580 TPM= 2.12 Transcript Type= NA
chr16	89285175	89490592	89285175	89490592	-	transcript4585.chr16.nic@ANKRD11	transcript4585.chr16.nic	protein_coding	89490245,89418284,89316933,89305206,89291681,89291013,89290625,89288528,89286039,89285564,89285175	89490592,89418368,89317075,89305344,89291777,89291183,89290828,89288670,89286186,89285649,89285562	Gene ID= ENSG00000167522.14 TPM= 2.92 Transcript Type= NA
chr16	89285175	89490599	89285175	89490599	-	transcript4594.chr16.nic@ANKRD11	transcript4594.chr16.nic	protein_coding	89490245,89418284,89316933,89305206,89291013,89290625,89288528,89286039,89285564,89285175	89490599,89418368,89317075,89305344,89291183,89290828,89288670,89286186,89285649,89285562	Gene ID= ENSG00000167522.14 TPM= 6.11 Transcript Type= NA
chr16	89283362	89490653	89283362	89490653	-	transcript4597.chr16.nic@ANKRD11	transcript4597.chr16.nic	protein_coding	89490245,89418284,89316933,89305206,89291013,89290625,89288528,89286039,89283362	89490653,89418368,89317075,89305344,89291183,89290828,89288670,89286186,89285649	Gene ID= ENSG00000167522.14 TPM= 23.9 Transcript Type= NA
chr16	89267627	89490318	89267627	89490318	-	ENST00000378330.6@ANKRD11	ENST00000378330.6	protein_coding	89490245,89431256,89418284,89316933,89305206,89291013,89290625,89288528,89286039,89279072,89275093,89274814,89270817,89267627	89490318,89431326,89418368,89317078,89305344,89291183,89290828,89288670,89286186,89285649,89275191,89274957,89270909,89268663	Gene ID= ENSG00000167522.14 TPM= 35.05 Transcript Type= protein_coding
chr16	89298876	89490563	89298876	89490563	-	transcript4613.chr16.nic@ANKRD11	transcript4613.chr16.nic	protein_coding	89490245,89418284,89316933,89305206,89298876	89490563,89418368,89317075,89305344,89300962	Gene ID= ENSG00000167522.14 TPM= 8.5 Transcript Type= NA
chr16	89267630	89490561	89267630	89490561	-	ENST00000301030.8@ANKRD11	ENST00000301030.8	protein_coding	89490245,89418284,89316933,89305206,89291013,89290625,89288528,89286039,89279072,89275093,89274814,89270817,89267630	89490561,89418368,89317078,89305344,89291183,89290828,89288670,89286186,89285649,89275191,89274957,89270909,89268663	Gene ID= ENSG00000167522.14 TPM= 25.49 Transcript Type= protein_coding
chr16	89508403	89557766	89508403	89557766	+	ENST00000268704.6@SPG7	ENST00000268704.6	protein_coding	89508403,89510490,89512948,89524006,89526329,89529477,89530683,89531904,89532463,89544648,89546658,89548003,89550494,89552979,89553794,89554486,89556887	89508600,89510592,89513037,89524247,89526468,89529579,89530808,89532066,89532636,89544772,89546760,89548113,89550609,89553135,89553960,89554563,89557766	Gene ID= ENSG00000197912.14 TPM= 155.34 Transcript Type= protein_coding
chr16	89508411	89537721	89508411	89537721	+	ENST00000341316.6@SPG7	ENST00000341316.6	protein_coding	89508411,89510490,89512948,89524006,89526329,89529477,89530683,89531904,89532463,89536765	89508600,89510592,89513037,89524247,89526468,89529579,89530808,89532066,89532636,89537721	Gene ID= ENSG00000197912.14 TPM= 40.63 Transcript Type= protein_coding
chr16	89560657	89566828	89560657	89566828	+	ENST00000311528.9@RPL13	ENST00000311528.9	protein_coding	89560657,89560940,89561227,89561578,89562335,89562884	89560712,89561063,89561368,89561751,89562391,89566828	Gene ID= ENSG00000167526.13 TPM= 460.98 Transcript Type= protein_coding
chr16	89560681	89563080	89560681	89563080	+	ENST00000567815.5@RPL13	ENST00000567815.5	protein_coding	89560681,89560954,89561227,89561578,89562335,89562884	89560712,89561063,89561368,89561751,89562391,89563080	Gene ID= ENSG00000167526.13 TPM= 28.68 Transcript Type= protein_coding
chr16	89560681	89563032	89560681	89563032	+	ENST00000563270.5@RPL13	ENST00000563270.5	protein_coding	89560681,89561227,89561578,89562335,89562884	89560712,89561368,89561751,89562391,89563032	Gene ID= ENSG00000167526.13 TPM= 2.12 Transcript Type= protein_coding
chr16	89644431	89657845	89644431	89657845	-	ENST00000397901.7@CHMP1A	ENST00000397901.7	protein_coding	89657582,89653904,89651569,89649351,89647203,89646527,89644431	89657845,89653923,89651646,89649497,89647331,89646714,89646087	Gene ID= ENSG00000131165.14 TPM= 141.8 Transcript Type= protein_coding
chr16	89644463	89657709	89644463	89657709	-	ENST00000535997.6@CHMP1A	ENST00000535997.6	protein_coding	89657582,89651569,89649351,89647203,89646527,89644463	89657709,89651646,89649497,89647331,89646714,89646087	Gene ID= ENSG00000131165.14 TPM= 7.97 Transcript Type= protein_coding
chr16	89686668	89696364	89686668	89696364	+	ENST00000353379.11@CDK10	ENST00000353379.11	protein_coding	89686668,89689252,89690553,89691443,89691806,89692449,89693274,89693398,89694173,89694665,89694931,89695293,89695595	89686797,89689324,89690624,89691545,89691887,89692516,89693326,89693467,89694232,89694788,89695070,89695345,89696364	Gene ID= ENSG00000185324.21 TPM= 10.62 Transcript Type= protein_coding
chr16	89686687	89696354	89686687	89696354	+	transcript4679.chr16.nnic@CDK10	transcript4679.chr16.nnic	protein_coding	89686687,89690553,89691443,89691806,89692449,89693274,89693398,89694173,89694665,89694931,89695293,89695595	89686759,89690624,89691545,89691887,89692516,89693326,89693467,89694232,89694788,89695070,89695345,89696354	Gene ID= ENSG00000185324.21 TPM= 9.03 Transcript Type= NA
chr16	89686700	89696354	89686700	89696354	+	ENST00000472018.5@CDK10	ENST00000472018.5	protein_coding	89686700,89689252,89690553,89691443,89691806,89692449,89693274,89694665,89694931,89695293,89695595	89686797,89689324,89690624,89691545,89691887,89692516,89694232,89694788,89695070,89695345,89696354	Gene ID= ENSG00000185324.21 TPM= 10.09 Transcript Type= retained_intron
chr16	89696343	89701695	89696343	89701695	-	ENST00000289805.9@SPATA2L	ENST00000289805.9	protein_coding	89701628,89700930,89696343	89701695,89701233,89698305	Gene ID= ENSG00000158792.15 TPM= 19.12 Transcript Type= protein_coding
chr16	89714746	89715965	89714746	89715965	-	transcript4724.chr16.nnic@NA	transcript4724.chr16.nnic	NA	89714746	89715965	Gene ID= novel_gene_chr16_4725 TPM= 2.12 Transcript Type= NA
chr16	89720985	89740903	89720985	89740903	+	ENST00000289816.9@ZNF276	ENST00000289816.9	protein_coding	89720985,89722531,89723137,89723260,89727279,89729235,89733302,89733482,89733921,89737806,89737976	89721276,89722834,89723183,89723709,89727357,89729318,89733412,89733557,89734038,89737905,89740903	Gene ID= ENSG00000158805.11 TPM= 3.19 Transcript Type= protein_coding
chr16	89721430	89740654	89721430	89740654	+	transcript4712.chr16.nnic@ZNF276	transcript4712.chr16.nnic	protein_coding	89721430,89723137,89723260,89727279,89729235,89733302,89733482,89733921,89737721,89737976	89722834,89723183,89723709,89727325,89729318,89733412,89733557,89734038,89737905,89740654	Gene ID= ENSG00000158805.11 TPM= 2.12 Transcript Type= NA
chr16	89721544	89738571	89721544	89738571	+	ENST00000443381.6@ZNF276	ENST00000443381.6	protein_coding	89721544,89722531,89723137,89723260,89727279,89729235,89733302,89733482,89733921,89737806,89737976	89721845,89722834,89723183,89723709,89727357,89729318,89733412,89733557,89734038,89737905,89738571	Gene ID= ENSG00000158805.11 TPM= 6.37 Transcript Type= protein_coding
chr16	89721573	89738571	89721573	89738571	+	ENST00000568295.5@ZNF276	ENST00000568295.5	protein_coding	89721573,89722531,89723137,89723260,89727279,89729235,89733302,89733482,89733921,89737806,89737976	89721845,89722834,89723183,89723709,89727325,89729318,89733412,89733557,89734038,89737905,89738571	Gene ID= ENSG00000158805.11 TPM= 3.19 Transcript Type= nonsense_mediated_decay
chr16	89873567	89911379	89873567	89911379	+	transcript4729.chr16.nic@TCF25	transcript4729.chr16.nic	protein_coding	89873567,89883351,89884582,89885848,89887652,89892193,89893728,89895038,89895990,89898557,89898767,89900635,89904118,89904938,89906194,89907243,89908966,89910591,89911080	89873859,89883512,89884656,89885966,89887717,89892275,89893858,89895137,89896083,89898649,89898872,89900794,89904205,89905096,89906284,89907322,89909107,89910663,89911379	Gene ID= ENSG00000141002.19 TPM= 10.64 Transcript Type= NA
chr16	89873567	89911379	89873567	89911379	+	transcript4737.chr16.nic@TCF25	transcript4737.chr16.nic	protein_coding	89873567,89883351,89884582,89885848,89887652,89892193,89893728,89895083,89895990,89898557,89898767,89900635,89904118,89904938,89906194,89907243,89910591,89911080	89873859,89883512,89884656,89885966,89887717,89892275,89893858,89895137,89896083,89898649,89898872,89900794,89904205,89905096,89906284,89907322,89910663,89911379	Gene ID= ENSG00000141002.19 TPM= 16.59 Transcript Type= NA
chr16	89873570	89913627	89873570	89913627	+	ENST00000640279.1@TCF25	ENST00000640279.1	protein_coding	89873570,89883351,89884582,89885848,89887652,89892193,89893728,89895038,89895990,89898557,89898767,89900635,89904118,89904938,89906194,89907243,89910591,89911080,89912495,89913232	89873859,89883512,89884656,89885966,89887717,89892275,89893858,89895137,89896083,89898649,89898872,89900794,89904205,89905096,89906284,89907322,89910663,89911250,89912645,89913627	Gene ID= ENSG00000141002.19 TPM= 13.48 Transcript Type= nonsense_mediated_decay
chr16	89873612	89911384	89873612	89911384	+	ENST00000263346.12@TCF25	ENST00000263346.12	protein_coding	89873612,89883351,89884582,89885848,89887652,89892193,89893728,89895038,89895990,89898557,89898767,89900635,89904118,89904938,89906194,89907243,89910591,89911080	89873859,89883512,89884656,89885966,89887717,89892275,89893858,89895137,89896083,89898649,89898872,89900794,89904205,89905096,89906284,89907322,89910663,89911384	Gene ID= ENSG00000141002.19 TPM= 134.92 Transcript Type= protein_coding
chr16	89873586	89911384	89873586	89911384	+	ENST00000263347.11@TCF25	ENST00000263347.11	protein_coding	89873586,89883351,89884582,89885848,89887652,89892193,89893728,89895038,89895990,89898557,89898767,89900635,89904118,89904938,89906194,89907243,89908966,89910591,89911080	89873859,89883512,89884656,89885966,89887717,89892275,89893858,89895137,89896083,89898649,89898872,89900794,89904205,89905096,89906284,89907322,89909083,89910663,89911384	Gene ID= ENSG00000141002.19 TPM= 14.89 Transcript Type= protein_coding
chr16	89873641	89890633	89873641	89890633	+	ENST00000614813.4@TCF25	ENST00000614813.4	protein_coding	89873641,89883351,89884582,89885848,89887652,89889228	89873859,89883512,89884656,89885966,89887717,89890633	Gene ID= ENSG00000141002.19 TPM= 2.27 Transcript Type= protein_coding
chr16	89917879	89920977	89917879	89920977	+	ENST00000555147.1@MC1R	ENST00000555147.1	protein_coding	89917879	89920977	Gene ID= ENSG00000258839.3 TPM= 2.12 Transcript Type= protein_coding
chr16	89923279	89936097	89923279	89936097	+	ENST00000315491.11@TUBB3	ENST00000315491.11	protein_coding	89923279,89932571,89933468,89934729	89923458,89932679,89933578,89936097	Gene ID= ENSG00000258947.6 TPM= 7.44 Transcript Type= protein_coding
chr16	89928963	89931350	89928963	89931350	-	transcript4754.chr16.nnic@NA	transcript4754.chr16.nnic	NA	89928963	89931350	Gene ID= novel_gene_chr16_4755 TPM= 2.12 Transcript Type= NA
chr16	89947925	89968060	89947925	89968060	+	ENST00000563594.5@DEF8	ENST00000563594.5	protein_coding	89947925,89949417,89954243,89955169,89957511,89959014,89960931,89961737,89962012,89963363,89964170,89964466,89965861	89948814,89949513,89954376,89955266,89957660,89959155,89961095,89961864,89962125,89963443,89964310,89964575,89968060	Gene ID= ENSG00000140995.16 TPM= 29.21 Transcript Type= protein_coding
chr16	89948760	89968059	89948760	89968059	+	transcript4757.chr16.nic@DEF8	transcript4757.chr16.nic	protein_coding	89948760,89954243,89955169,89957511,89959014,89960931,89961737,89962012,89963363,89964170,89964466,89965861	89948814,89954376,89955266,89957660,89959155,89961095,89961864,89962125,89963443,89964310,89964575,89968059	Gene ID= ENSG00000140995.16 TPM= 19.65 Transcript Type= NA
chr16	89948731	89959363	89948731	89959363	+	ENST00000610455.4@DEF8	ENST00000610455.4	protein_coding	89948731,89954243,89955169,89957511,89959014	89948814,89954376,89955266,89957660,89959363	Gene ID= ENSG00000140995.16 TPM= 6.9 Transcript Type= protein_coding
chr16	89948734	89959366	89948734	89959366	+	transcript4763.chr16.nic@DEF8	transcript4763.chr16.nic	protein_coding	89948734,89955169,89957511,89959014	89948814,89955266,89957660,89959366	Gene ID= ENSG00000140995.16 TPM= 10.62 Transcript Type= NA
chr16	89948795	89959366	89948795	89959366	+	ENST00000418391.6@DEF8	ENST00000418391.6	protein_coding	89948795,89949417,89954243,89955169,89957511,89959014	89948814,89949513,89954376,89955266,89957660,89959366	Gene ID= ENSG00000140995.16 TPM= 10.09 Transcript Type= protein_coding
chr16	89969791	89972534	89969791	89972534	-	ENST00000314994.4@CENPBD1	ENST00000314994.4	protein_coding	89969791	89972534	Gene ID= ENSG00000177946.5 TPM= 9.56 Transcript Type= protein_coding
chr16	90004865	90019473	90004865	90019473	-	ENST00000002501.10@DBNDD1	ENST00000002501.10	protein_coding	90019311,90009284,90008784,90004865	90019473,90009430,90008924,90006492	Gene ID= ENSG00000003249.13 TPM= 5.31 Transcript Type= protein_coding
chr16	90022600	90044971	90022600	90044971	+	ENST00000620723.4@GAS8	ENST00000620723.4	protein_coding	90022600,90027636,90031176,90032718,90035633,90036381,90037232,90037762,90040300,90042470,90043196	90022724,90027722,90031496,90032924,90035687,90036586,90037399,90037848,90040509,90042535,90044971	Gene ID= ENSG00000141013.16 TPM= 7.44 Transcript Type= protein_coding
chr16	90022600	90044971	90022600	90044971	+	ENST00000268699.8@GAS8	ENST00000268699.8	protein_coding	90022600,90027636,90031299,90032718,90035633,90036381,90037232,90037762,90040300,90042470,90043196	90022724,90027722,90031496,90032924,90035687,90036586,90037399,90037848,90040509,90042535,90044971	Gene ID= ENSG00000141013.16 TPM= 49.92 Transcript Type= protein_coding
chr16	90019643	90043472	90019643	90043472	+	ENST00000536122.7@GAS8	ENST00000536122.7	protein_coding	90019643,90027636,90031299,90032718,90035633,90036381,90037232,90037762,90040300,90042470,90043196	90019768,90027722,90031496,90032924,90035687,90036586,90037399,90037848,90040509,90042535,90043472	Gene ID= ENSG00000141013.16 TPM= 2.12 Transcript Type= protein_coding
chr16	90022683	90044975	90022683	90044975	+	ENST00000566266.5@GAS8	ENST00000566266.5	protein_coding	90022683,90027636,90031176,90032718,90036381,90037232,90037762,90040300,90042470,90043196	90022724,90027722,90031496,90032924,90036586,90037399,90037848,90040509,90042535,90044975	Gene ID= ENSG00000141013.16 TPM= 4.25 Transcript Type= nonsense_mediated_decay
chr16	90127562	90215859	90127562	90215859	+	transcript4800.chr16.nnic@FAM157C	transcript4800.chr16.nnic	lincRNA	90127562,90129797,90133219,90136542,90214682,90215293	90128732,90129928,90133434,90136600,90214831,90215859	Gene ID= ENSG00000260528.4 TPM= 11.68 Transcript Type= NA
chr17	142789	181636	142789	181636	-	ENST00000613549.2@DOC2B	ENST00000613549.2	protein_coding	181107,172537,164130,162081,161415,156220,149111,148173,142789	181636,172616,164204,162190,161541,156377,149192,148269,147577	Gene ID= ENSG00000272636.3 TPM= 3.19 Transcript Type= protein_coding
chr17	212502	386353	212502	386353	-	transcript5.chr17.nic@RPH3AL	transcript5.chr17.nic	protein_coding	386197,333759,327467,321272,319420,281768,247111,219623,215654,212502	386353,333934,327579,321415,319549,281854,247285,219736,215802,213923	Gene ID= ENSG00000181031.15 TPM= 10.62 Transcript Type= NA
chr17	324681	326419	324681	326419	-	transcript11.chr17.nnic@NA	transcript11.chr17.nnic	NA	324681	326419	Gene ID= novel_gene_chr17_12 TPM= 2.12 Transcript Type= NA
chr17	331318	333477	331318	333477	+	transcript9.chr17.nnic@AC129507.1	transcript9.chr17.nnic	processed_transcript	331318,333201	333138,333477	Gene ID= ENSG00000262061.5 TPM= 3.19 Transcript Type= NA
chr17	439978	445939	439978	445939	-	ENST00000329099.4@RFLNB	ENST00000329099.4	protein_coding	445836,439978	445939,443494	Gene ID= ENSG00000183688.4 TPM= 23.37 Transcript Type= protein_coding
chr17	508668	714856	508668	714856	-	ENST00000437048.6@VPS53	ENST00000437048.6	protein_coding	714623,710533,699331,697418,661809,655838,653291,631550,628088,627174,623533,601795,586270,562503,560426,553380,551872,537028,532842,521601,519826,508668	714856,710613,699380,697484,661895,655953,653410,631628,628231,627316,623674,601896,586364,562745,560573,553462,551950,537176,532911,521738,519930,519298	Gene ID= ENSG00000141252.19 TPM= 41.42 Transcript Type= protein_coding
chr17	667554	669606	667554	669606	+	transcript27.chr17.nnic@NA	transcript27.chr17.nnic	NA	667554	669606	Gene ID= novel_gene_chr17_28 TPM= 6.37 Transcript Type= NA
chr17	732412	742972	732412	742972	+	ENST00000308278.12@FAM57A	ENST00000308278.12	protein_coding	732412,733098,737846,740505,741301	732769,733181,738047,740600,742972	Gene ID= ENSG00000167695.14 TPM= 4.25 Transcript Type= protein_coding
chr17	759097	782341	759097	782341	-	ENST00000301329.10@GLOD4	ENST00000301329.10	protein_coding	782166,778695,776868,775775,771325,770421,770044,769869,759097	782341,778744,776988,775919,771461,770507,770157,769955,760238	Gene ID= ENSG00000167699.13 TPM= 31.86 Transcript Type= protein_coding
chr17	782365	789776	782365	789776	+	transcript51.chr17.nnic@MRM3	transcript51.chr17.nnic	protein_coding	782365,783083,787965,789010	782692,783327,788132,789776	Gene ID= ENSG00000171861.10 TPM= 2.12 Transcript Type= NA
chr17	782273	792509	782273	792509	+	ENST00000304478.8@MRM3	ENST00000304478.8	protein_coding	782273,783083,787965,791534	782692,783327,788132,792509	Gene ID= ENSG00000171861.10 TPM= 42.49 Transcript Type= protein_coding
chr17	799313	979770	799313	979770	-	ENST00000336868.7@NXN	ENST00000336868.7	protein_coding	979319,825961,823632,822357,819439,805068,803682,799313	979770,826078,823765,822457,819545,805247,803806,801131	Gene ID= ENSG00000167693.16 TPM= 27.62 Transcript Type= protein_coding
chr17	909632	911212	909632	911212	+	ENST00000576252.1@AC087392.1	ENST00000576252.1	antisense_RNA	909632,910694	909932,911212	Gene ID= ENSG00000262003.1 TPM= 1.06 Transcript Type= antisense_RNA
chr17	997117	1003671	997117	1003671	+	ENST00000327158.4@TIMM22	ENST00000327158.4	protein_coding	997117,998779,999512,1001012	997380,998975,999584,1003671	Gene ID= ENSG00000177370.4 TPM= 1.06 Transcript Type= protein_coding
chr17	1003527	1187322	1003527	1187322	-	ENST00000544583.6@ABR	ENST00000544583.6	protein_coding	1186800,1125183,1100637,1091665,1083520,1079330,1073625,1072614,1069969,1067077,1058745,1057970,1056998,1056035,1050537,1050050,1013105,1012688,1011846,1010729,1009679,1007165,1003527	1187322,1125367,1100735,1091850,1083627,1079390,1073677,1072754,1070090,1067242,1058867,1058045,1057102,1056109,1050634,1050181,1013164,1012797,1011985,1010863,1009784,1007312,1006169	Gene ID= ENSG00000159842.14 TPM= 192.25 Transcript Type= protein_coding
chr17	1344540	1400220	1344540	1400220	-	ENST00000571732.5@YWHAE	ENST00000571732.5	protein_coding	1400047,1369709,1364859,1361902,1361092,1354211,1344540	1400220,1369741,1365058,1362008,1361298,1354347,1345499	Gene ID= ENSG00000108953.16 TPM= 65.32 Transcript Type= protein_coding
chr17	1344544	1400241	1344544	1400241	-	transcript86.chr17.nic@YWHAE	transcript86.chr17.nic	protein_coding	1400047,1364859,1361902,1361092,1354211,1347962,1344544	1400241,1365058,1362008,1361298,1354347,1348008,1345499	Gene ID= ENSG00000108953.16 TPM= 64.79 Transcript Type= NA
chr17	1344272	1400378	1344272	1400378	-	ENST00000264335.12@YWHAE	ENST00000264335.12	protein_coding	1400047,1364859,1361902,1361092,1354211,1344272	1400378,1365058,1362008,1361298,1354347,1345499	Gene ID= ENSG00000108953.16 TPM= 37.71 Transcript Type= protein_coding
chr17	1420689	1456258	1420689	1456258	-	ENST00000300574.2@CRK	ENST00000300574.2	protein_coding	1455877,1436620,1420689	1456258,1437155,1423650	Gene ID= ENSG00000167193.7 TPM= 6.9 Transcript Type= protein_coding
chr17	1420689	1456223	1420689	1456223	-	ENST00000398970.5@CRK	ENST00000398970.5	protein_coding	1455877,1436790,1420689	1456223,1437155,1423650	Gene ID= ENSG00000167193.7 TPM= 5.84 Transcript Type= protein_coding
chr17	1464186	1486201	1464186	1486201	-	ENST00000575158.5@MYO1C	ENST00000575158.5	protein_coding	1486055,1484148,1483610,1482861,1482478,1480706,1480527,1479592,1479431,1478616,1478410,1478087,1477891,1477505,1474938,1474812,1474610,1472123,1471907,1471223,1471071,1470621,1470435,1470175,1469531,1468403,1468253,1467988,1467840,1467480,1467242,1464186	1486201,1484303,1483725,1483059,1482558,1480885,1480625,1479705,1479502,1478735,1478492,1478192,1477971,1477596,1475032,1474858,1474690,1472228,1472024,1471336,1471147,1470689,1470519,1470334,1469614,1468496,1468308,1468123,1467910,1467577,1467341,1465752	Gene ID= ENSG00000197879.14 TPM= 8.85 Transcript Type= protein_coding
chr17	1464098	1492812	1464098	1492812	-	ENST00000359786.9@MYO1C	ENST00000359786.9	protein_coding	1492413,1484148,1483610,1482861,1482478,1480706,1480527,1479592,1479431,1478616,1478410,1478087,1477891,1477505,1474938,1474812,1474610,1472123,1471907,1471223,1471071,1470621,1470435,1470175,1469531,1468403,1468253,1467988,1467840,1467480,1467242,1464098	1492812,1484303,1483725,1483059,1482558,1480885,1480625,1479705,1479502,1478735,1478492,1478192,1477971,1477596,1475032,1474858,1474690,1472228,1472024,1471336,1471147,1470689,1470519,1470334,1469614,1468496,1468308,1468123,1467910,1467577,1467341,1465752	Gene ID= ENSG00000197879.14 TPM= 8.85 Transcript Type= protein_coding
chr17	1464188	1491678	1464188	1491678	-	ENST00000361007.6@MYO1C	ENST00000361007.6	protein_coding	1491600,1484148,1483610,1482861,1482478,1480706,1480527,1479592,1479431,1478616,1478410,1478087,1477891,1477505,1474938,1474812,1474610,1472123,1471907,1471223,1471071,1470621,1470435,1470175,1469531,1468403,1468253,1467988,1467840,1467480,1467242,1464188	1491678,1484303,1483725,1483059,1482558,1480885,1480625,1479705,1479502,1478735,1478492,1478192,1477971,1477596,1475032,1474858,1474690,1472228,1472024,1471336,1471147,1470689,1470519,1470334,1469614,1468496,1468308,1468123,1467910,1467577,1467341,1465752	Gene ID= ENSG00000197879.14 TPM= 18.41 Transcript Type= protein_coding
chr17	1494571	1516660	1494571	1516660	-	transcript128.chr17.nnic@INPP5K	transcript128.chr17.nnic	protein_coding	1516456,1513872,1513453,1509683,1509178,1508115,1507964,1506980,1497936,1496666,1496319,1496060,1494571	1516660,1513979,1513561,1509799,1509353,1508226,1508005,1507089,1498122,1496803,1496402,1496164,1495879	Gene ID= ENSG00000132376.19 TPM= 11.15 Transcript Type= NA
chr17	1494571	1516888	1494571	1516888	-	ENST00000421807.6@INPP5K	ENST00000421807.6	protein_coding	1516456,1513872,1513453,1509683,1509178,1508115,1506980,1497936,1496666,1496319,1496060,1494571	1516888,1513979,1513561,1509799,1509353,1508226,1507089,1498122,1496803,1496402,1496164,1495879	Gene ID= ENSG00000132376.19 TPM= 54.7 Transcript Type= protein_coding
chr17	1516931	1518096	1516931	1518096	+	ENST00000425081.2@PITPNA-AS1	ENST00000425081.2	antisense_RNA	1516931,1517718	1517093,1518096	Gene ID= ENSG00000236618.2 TPM= 9.56 Transcript Type= antisense_RNA
chr17	1517993	1562791	1517993	1562791	-	ENST00000539476.5@PITPNA	ENST00000539476.5	protein_coding	1562541,1558529,1553004,1548296,1541642,1541566,1538869,1535441,1535182,1534099,1521579,1517993	1562791,1558559,1553149,1548387,1541649,1541640,1538952,1535518,1535292,1534221,1521645,1520538	Gene ID= ENSG00000174238.14 TPM= 39.3 Transcript Type= protein_coding
chr17	1520213	1562746	1520213	1562746	-	ENST00000575288.5@PITPNA	ENST00000575288.5	protein_coding	1562541,1558529,1553004,1548296,1538869,1535441,1535182,1534099,1521579,1520213	1562746,1558559,1553149,1548387,1538952,1535518,1535292,1534221,1521645,1520538	Gene ID= ENSG00000174238.14 TPM= 3.19 Transcript Type= nonsense_mediated_decay
chr17	1633858	1645747	1633858	1645747	-	ENST00000263071.8@SCARF1	ENST00000263071.8	protein_coding	1645597,1645178,1644834,1643442,1640448,1639912,1639639,1638806,1636941,1636709,1633858	1645747,1645239,1644935,1643967,1640666,1640040,1639742,1638926,1637062,1636855,1635617	Gene ID= ENSG00000074660.15 TPM= 18.06 Transcript Type= protein_coding
chr17	1646150	1650077	1646150	1650077	-	ENST00000301336.6@RILP	ENST00000301336.6	protein_coding	1649577,1649412,1649200,1648799,1648350,1647835,1646906,1646150	1650077,1649505,1649306,1649044,1648495,1647957,1646989,1646619	Gene ID= ENSG00000167705.11 TPM= 156.22 Transcript Type= protein_coding
chr17	1646145	1649904	1646145	1649904	-	transcript156.chr17.nic@RILP	transcript156.chr17.nic	protein_coding	1649577,1649412,1649200,1648799,1648350,1647835,1646145	1649904,1649505,1649306,1649044,1648495,1647957,1646619	Gene ID= ENSG00000167705.11 TPM= 24.96 Transcript Type= NA
chr17	1646150	1649865	1646150	1649865	-	transcript157.chr17.nic@RILP	transcript157.chr17.nic	protein_coding	1649577,1649200,1648799,1648350,1647835,1646906,1646150	1649865,1649505,1649044,1648495,1647957,1646989,1646619	Gene ID= ENSG00000167705.11 TPM= 11.77 Transcript Type= NA
chr17	1646145	1648916	1646145	1648916	-	transcript164.chr17.nnic@RILP	transcript164.chr17.nnic	protein_coding	1648799,1647835,1646145	1648916,1647957,1646619	Gene ID= ENSG00000167705.11 TPM= 5.31 Transcript Type= NA
chr17	1647146	1649834	1647146	1649834	-	transcript165.chr17.nnic@NA	transcript165.chr17.nnic	NA	1647146	1649834	Gene ID= novel_gene_chr17_166 TPM= 3.19 Transcript Type= NA
chr17	1650629	1684882	1650629	1684882	-	ENST00000304992.10@PRPF8	ENST00000304992.10	protein_coding	1684780,1684472,1683533,1682129,1681820,1681478,1680929,1680726,1679609,1679291,1679017,1678762,1678518,1677565,1676976,1676505,1676207,1675928,1675620,1675152,1674442,1673746,1673357,1673081,1661906,1661611,1661271,1660993,1660698,1660432,1659841,1659357,1658526,1658253,1656648,1656392,1655350,1653777,1653542,1651648,1651414,1651108,1650629	1684882,1684582,1683701,1682293,1682038,1681690,1681054,1680831,1679799,1679410,1679206,1678881,1678652,1677694,1677172,1676711,1676370,1676054,1675812,1675339,1674680,1673892,1673567,1673197,1662153,1661790,1661406,1661162,1660827,1660578,1660001,1659548,1658763,1658381,1656761,1656565,1655543,1654016,1653683,1651788,1651553,1651310,1650956	Gene ID= ENSG00000174231.16 TPM= 43.55 Transcript Type= protein_coding
chr17	1650631	1684837	1650631	1684837	-	ENST00000572621.5@PRPF8	ENST00000572621.5	protein_coding	1684472,1683533,1682129,1681820,1681478,1680929,1680726,1679609,1679291,1679017,1678762,1678518,1677565,1676976,1676505,1676207,1675928,1675620,1675152,1674442,1673746,1673357,1673081,1661906,1661611,1661271,1660993,1660698,1660432,1659841,1659357,1658526,1658253,1656648,1656392,1655350,1653777,1653542,1651648,1651414,1651108,1650631	1684837,1683701,1682293,1682038,1681690,1681054,1680831,1679799,1679410,1679206,1678881,1678652,1677694,1677172,1676711,1676370,1676054,1675812,1675339,1674680,1673892,1673567,1673197,1662153,1661790,1661406,1661162,1660827,1660578,1660001,1659548,1658763,1658381,1656761,1656565,1655543,1654016,1653683,1651788,1651553,1651310,1650956	Gene ID= ENSG00000174231.16 TPM= 32.93 Transcript Type= protein_coding
chr17	1703057	1703146	1703057	1703146	-	transcript170.chr17.nnic@NA	transcript170.chr17.nnic	NA	1703057	1703146	Gene ID= novel_gene_chr17_171 TPM= 2.12 Transcript Type= NA
chr17	1711519	1716226	1711519	1716226	-	transcript181.chr17.nic@MIR22HG	transcript181.chr17.nic	lincRNA	1716130,1714371,1711519	1716226,1714453,1714014	Gene ID= ENSG00000186594.14 TPM= 16.99 Transcript Type= NA
chr17	1711511	1716251	1711511	1716251	-	ENST00000574306.1@MIR22HG	ENST00000574306.1	lincRNA	1716130,1711511	1716251,1714014	Gene ID= ENSG00000186594.14 TPM= 14.87 Transcript Type= lincRNA
chr17	1711493	1716210	1711493	1716210	-	ENST00000334146.7@MIR22HG	ENST00000334146.7	lincRNA	1716130,1714371,1713703,1711493	1716210,1714453,1714014,1712399	Gene ID= ENSG00000186594.14 TPM= 3.19 Transcript Type= lincRNA
chr17	1761959	1777574	1761959	1777574	+	ENST00000254722.8@SERPINF1	ENST00000254722.8	protein_coding	1761959,1766903,1769852,1771029,1771872,1775058,1776532,1777187	1762113,1766994,1770050,1771184,1772075,1775200,1776742,1777574	Gene ID= ENSG00000132386.10 TPM= 183.75 Transcript Type= protein_coding
chr17	1779538	1783893	1779538	1783893	-	transcript195.chr17.nnic@SMYD4	transcript195.chr17.nnic	protein_coding	1783616,1783360,1783035,1779538	1783893,1783476,1783158,1781439	Gene ID= ENSG00000186532.11 TPM= 2.12 Transcript Type= NA
chr17	1832265	1833858	1832265	1833858	+	transcript199.chr17.nnic@NA	transcript199.chr17.nnic	NA	1832265	1833858	Gene ID= novel_gene_chr17_200 TPM= 2.12 Transcript Type= NA
chr17	2030110	2043430	2030110	2043430	+	ENST00000263083.10@DPH1	ENST00000263083.10	protein_coding	2030110,2033505,2033779,2035970,2036529,2036835,2039755,2040218,2040505,2041103,2041481,2041768,2042605	2030230,2033657,2033842,2036091,2036686,2036956,2039823,2040374,2040605,2041181,2041621,2041875,2043430	Gene ID= ENSG00000108963.17 TPM= 23.37 Transcript Type= protein_coding
chr17	2055099	2059686	2055099	2059686	+	ENST00000399849.4@HIC1	ENST00000399849.4	protein_coding	2055099,2056671	2055238,2059686	Gene ID= ENSG00000177374.12 TPM= 32.93 Transcript Type= protein_coding
chr17	2303704	2325260	2303704	2325260	+	ENST00000344595.9@SRR	ENST00000344595.9	protein_coding	2303704,2315557,2317870,2318826,2321306,2321542,2323136,2323655	2304017,2315728,2317996,2318929,2321425,2321616,2323345,2325260	Gene ID= ENSG00000167720.12 TPM= 9.56 Transcript Type= protein_coding
chr17	2322503	2337507	2322503	2337507	-	ENST00000301364.9@TSR1	ENST00000301364.9	protein_coding	2336331,2336037,2335511,2335260,2334472,2333557,2332961,2332169,2330947,2330515,2329343,2325304,2324689,2324504,2322503	2337507,2336140,2335730,2335394,2334896,2333716,2333124,2332359,2331109,2330625,2329475,2325420,2324829,2324578,2324374	Gene ID= ENSG00000167721.10 TPM= 23.37 Transcript Type= protein_coding
chr17	2322394	2336467	2322394	2336467	-	transcript223.chr17.nic@TSR1	transcript223.chr17.nic	protein_coding	2336331,2335511,2335260,2334472,2333557,2332961,2332169,2330947,2330515,2329343,2325304,2324689,2324504,2322394	2336467,2335730,2335394,2334896,2333716,2333124,2332359,2331109,2330625,2329475,2325420,2324829,2324578,2324374	Gene ID= ENSG00000167721.10 TPM= 3.19 Transcript Type= NA
chr17	2337502	2374598	2337502	2374598	+	transcript242.chr17.nic@SGSM2	transcript242.chr17.nic	protein_coding	2337502,2343545,2361637,2362109,2362838,2362989,2363465,2364059,2364596,2364897,2365215,2371262,2372190,2372343,2372953	2337745,2343620,2361799,2362270,2362905,2363134,2363599,2364183,2364663,2365057,2365341,2371415,2372254,2372488,2374598	Gene ID= ENSG00000141258.12 TPM= 4.25 Transcript Type= NA
chr17	2337512	2381050	2337512	2381050	+	ENST00000268989.7@SGSM2	ENST00000268989.7	protein_coding	2337512,2343545,2361637,2362109,2362838,2362989,2363465,2364059,2364596,2364897,2365215,2367271,2371262,2372190,2372343,2372953,2373331,2375492,2376137,2376733,2376959,2377857,2379036,2379432	2337745,2343620,2361799,2362270,2362905,2363134,2363599,2364183,2364663,2365057,2365341,2367405,2371415,2372254,2372488,2373081,2373513,2375875,2376261,2376815,2377068,2377953,2379203,2381050	Gene ID= ENSG00000141258.12 TPM= 35.05 Transcript Type= protein_coding
chr17	2384241	2386746	2384241	2386746	-	transcript248.chr17.nnic@NA	transcript248.chr17.nnic	NA	2384241	2386746	Gene ID= novel_gene_chr17_249 TPM= 4.25 Transcript Type= NA
chr17	2593746	2685615	2593746	2685615	+	ENST00000397195.9@PAFAH1B1	ENST00000397195.9	protein_coding	2593746,2638099,2665372,2666016,2666992,2670163,2672655,2674060,2676505,2680164,2681729	2594006,2638320,2665456,2666090,2667198,2670331,2672757,2674288,2676606,2680320,2685615	Gene ID= ENSG00000007168.12 TPM= 49.92 Transcript Type= protein_coding
chr17	2612212	2613620	2612212	2613620	-	transcript271.chr17.nnic@NA	transcript271.chr17.nnic	NA	2612212	2613620	Gene ID= novel_gene_chr17_272 TPM= 4.25 Transcript Type= NA
chr17	2689389	2693156	2689389	2693156	-	transcript274.chr17.nic@CLUH	transcript274.chr17.nic	protein_coding	2692780,2692571,2692361,2692004,2691761,2691609,2689389	2693156,2692696,2692482,2692097,2691895,2691682,2690777	Gene ID= ENSG00000132361.16 TPM= 164.63 Transcript Type= NA
chr17	3594326	3597807	3594326	3597807	-	transcript291.chr17.nnic@NA	transcript291.chr17.nnic	NA	3594326	3597807	Gene ID= novel_gene_chr17_292 TPM= 2.12 Transcript Type= NA
chr17	3636747	3661538	3636747	3661538	+	transcript298.chr17.nic@CTNS	transcript298.chr17.nic	protein_coding	3636747,3637107,3640188,3647444,3654998,3655221,3656487,3656676,3658005,3659858,3660236	3636831,3637316,3640267,3647522,3655101,3655352,3656586,3656795,3658175,3659975,3661538	Gene ID= ENSG00000040531.14 TPM= 2.12 Transcript Type= NA
chr17	3656877	3659294	3656877	3659294	-	transcript338.chr17.nnic@NA	transcript338.chr17.nnic	NA	3656877	3659294	Gene ID= novel_gene_chr17_339 TPM= 3.19 Transcript Type= NA
chr17	3662895	3668707	3662895	3668707	-	transcript311.chr17.nnic@TAX1BP3	transcript311.chr17.nnic	protein_coding	3668488,3664679,3664195,3663659,3662895	3668707,3664798,3664272,3663885,3663563	Gene ID= ENSG00000213977.7 TPM= 48.51 Transcript Type= NA
chr17	3662895	3668626	3662895	3668626	-	transcript312.chr17.nnic@TAX1BP3	transcript312.chr17.nnic	protein_coding	3668488,3664679,3664195,3663638,3662895	3668626,3664798,3664272,3663885,3663566	Gene ID= ENSG00000213977.7 TPM= 6.02 Transcript Type= NA
chr17	3677682	3696302	3677682	3696302	-	transcript297.chr17.nnic@P2RX5-TAX1BP3	transcript297.chr17.nnic	protein_coding	3695869,3691644,3690956,3690605,3690427,3690070,3689492,3688626,3688012,3681896,3679590,3677682	3696302,3691794,3691027,3690680,3690523,3690150,3689630,3688759,3688105,3681978,3679784,3678136	Gene ID= ENSG00000257950.3 TPM= 2.12 Transcript Type= NA
chr17	3665176	3667359	3665176	3667359	+	transcript330.chr17.nnic@NA	transcript330.chr17.nnic	NA	3665176	3667359	Gene ID= novel_gene_chr17_331 TPM= 35.05 Transcript Type= NA
chr17	3668170	3669660	3668170	3669660	+	transcript332.chr17.nnic@NA	transcript332.chr17.nnic	NA	3668170	3669660	Gene ID= novel_gene_chr17_333 TPM= 2.12 Transcript Type= NA
chr17	3668822	3669668	3668822	3669668	+	ENST00000397133.2@EMC6	ENST00000397133.2	protein_coding	3668822,3669098	3669012,3669668	Gene ID= ENSG00000127774.6 TPM= 15.93 Transcript Type= protein_coding
chr17	3668815	3669665	3668815	3669665	+	ENST00000248378.5@EMC6	ENST00000248378.5	protein_coding	3668815,3669098	3668899,3669665	Gene ID= ENSG00000127774.6 TPM= 64.79 Transcript Type= protein_coding
chr17	3671650	3672998	3671650	3672998	-	transcript336.chr17.nnic@NA	transcript336.chr17.nnic	NA	3671650	3672998	Gene ID= novel_gene_chr17_337 TPM= 2.12 Transcript Type= NA
chr17	3673227	3696404	3673227	3696404	-	ENST00000225328.9@P2RX5	ENST00000225328.9	protein_coding	3695869,3691644,3690956,3690605,3690427,3690070,3689492,3688626,3688012,3681896,3679590,3673227	3696404,3691794,3691027,3690680,3690523,3690150,3689630,3688759,3688105,3681978,3679784,3673877	Gene ID= ENSG00000083454.21 TPM= 30.8 Transcript Type= protein_coding
chr17	3672199	3696096	3672199	3696096	-	ENST00000552276.5@P2RX5	ENST00000552276.5	protein_coding	3695869,3691644,3690956,3690605,3690427,3690070,3689492,3688626,3688012,3681896,3679590,3672199	3696096,3691794,3691027,3690680,3690523,3690150,3689627,3688759,3688105,3681978,3679784,3672493	Gene ID= ENSG00000083454.21 TPM= 1.06 Transcript Type= protein_coding
chr17	3673227	3696096	3673227	3696096	-	ENST00000547178.5@P2RX5	ENST00000547178.5	protein_coding	3695869,3691644,3690956,3690605,3690427,3690070,3689492,3688626,3688012,3681896,3679590,3673227	3696096,3691794,3691027,3690680,3690523,3690150,3689627,3688759,3688105,3681978,3679784,3673877	Gene ID= ENSG00000083454.21 TPM= 6.37 Transcript Type= protein_coding
chr17	3673228	3675751	3673228	3675751	-	transcript340.chr17.nnic@NA	transcript340.chr17.nnic	NA	3673228	3675751	Gene ID= novel_gene_chr17_341 TPM= 4.25 Transcript Type= NA
chr17	3698045	3699866	3698045	3699866	+	transcript334.chr17.nnic@NA	transcript334.chr17.nnic	NA	3698045	3699866	Gene ID= novel_gene_chr17_335 TPM= 5.31 Transcript Type= NA
chr17	3714628	3723837	3714628	3723837	-	ENST00000572179.5@ITGAE	ENST00000572179.5	protein_coding	3723688,3720307,3716688,3714628	3723837,3720402,3716798,3714942	Gene ID= ENSG00000083457.11 TPM= 27.62 Transcript Type= processed_transcript
chr17	3723903	3726699	3723903	3726699	+	ENST00000325418.5@HASPIN	ENST00000325418.5	protein_coding	3723903	3726699	Gene ID= ENSG00000177602.5 TPM= 1.06 Transcript Type= protein_coding
chr17	3806749	3808953	3806749	3808953	-	transcript343.chr17.nnic@NA	transcript343.chr17.nnic	NA	3806749	3808953	Gene ID= novel_gene_chr17_344 TPM= 7.44 Transcript Type= NA
chr17	3811710	3846267	3811710	3846267	-	transcript348.chr17.nic@NCBP3	transcript348.chr17.nic	protein_coding	3846041,3843086,3840100,3829243,3826087,3825767,3824942,3821953,3821249,3818263,3816116,3814322,3813117,3811710	3846267,3843151,3840205,3829368,3826215,3825843,3825050,3822052,3821352,3818572,3816270,3814483,3813279,3812654	Gene ID= ENSG00000074356.16 TPM= 3.19 Transcript Type= NA
chr17	3839104	3846267	3839104	3846267	-	transcript361.chr17.nic@NCBP3	transcript361.chr17.nic	protein_coding	3846041,3843086,3839104	3846267,3843151,3840205	Gene ID= ENSG00000074356.16 TPM= 2.12 Transcript Type= NA
chr17	3896592	3916500	3896592	3916500	-	ENST00000225538.3@P2RX1	ENST00000225538.3	protein_coding	3916089,3905220,3904858,3904330,3903928,3903551,3903202,3899634,3898934,3898484,3898009,3896592	3916500,3905367,3904929,3904399,3904024,3903631,3903343,3899761,3899024,3898549,3898110,3897879	Gene ID= ENSG00000108405.3 TPM= 5.31 Transcript Type= protein_coding
chr17	3913303	3916467	3913303	3916467	-	transcript372.chr17.nnic@NA	transcript372.chr17.nnic	NA	3913303	3916467	Gene ID= novel_gene_chr17_373 TPM= 2.12 Transcript Type= NA
chr17	4004445	4143020	4004445	4143020	-	ENST00000381638.6@ZZEF1	ENST00000381638.6	protein_coding	4142542,4123907,4116972,4114299,4112609,4109653,4105693,4104633,4102317,4096609,4095831,4090719,4088678,4087434,4086486,4085670,4082437,4081376,4077883,4076868,4076637,4075263,4075097,4074150,4072608,4070684,4067163,4066447,4064361,4062753,4059171,4057994,4056216,4054057,4051971,4050781,4049708,4044224,4042429,4034015,4032828,4032126,4024919,4022709,4021129,4019669,4017836,4017371,4016323,4014347,4014090,4013449,4009604,4008883,4004445	4143020,4124051,4117166,4114470,4112808,4109863,4105809,4104811,4102415,4096700,4095979,4090830,4088893,4087534,4086655,4085803,4082504,4081490,4078042,4076989,4076759,4075429,4075178,4074351,4072756,4070924,4067242,4066540,4064829,4062917,4059290,4058155,4056345,4054195,4052136,4051043,4049859,4044374,4042568,4034292,4033002,4032258,4025118,4022828,4021320,4019769,4017971,4017730,4016466,4014515,4014188,4013614,4009757,4008954,4006970	Gene ID= ENSG00000074755.14 TPM= 25.49 Transcript Type= protein_coding
chr17	4143211	4157572	4143211	4157572	+	ENST00000575251.5@CYB5D2	ENST00000575251.5	protein_coding	4143211,4149891,4154674,4156866	4143763,4150031,4154860,4157572	Gene ID= ENSG00000167740.9 TPM= 1.06 Transcript Type= protein_coding
chr17	4143256	4157697	4143256	4157697	+	ENST00000301391.7@CYB5D2	ENST00000301391.7	protein_coding	4143256,4149891,4154674,4156866	4144005,4150031,4154860,4157697	Gene ID= ENSG00000167740.9 TPM= 7.44 Transcript Type= protein_coding
chr17	4160465	4162398	4160465	4162398	+	transcript389.chr17.nnic@NA	transcript389.chr17.nnic	NA	4160465	4162398	Gene ID= novel_gene_chr17_390 TPM= 2.12 Transcript Type= NA
chr17	4163907	4263977	4163907	4263977	-	ENST00000341657.8@ANKFY1	ENST00000341657.8	protein_coding	4263932,4242256,4235772,4216983,4209824,4207933,4206321,4197373,4195403,4194978,4189382,4184818,4183812,4183398,4182181,4181254,4179721,4178857,4177126,4173909,4173354,4172556,4170715,4169198,4163907	4263977,4242448,4235890,4217118,4209947,4208082,4206486,4197577,4195471,4195177,4189479,4185046,4183910,4183551,4182349,4181372,4179877,4179057,4177302,4174056,4173444,4172680,4170861,4169288,4167911	Gene ID= ENSG00000185722.16 TPM= 5.31 Transcript Type= protein_coding
chr17	4269259	4366482	4269259	4366482	-	ENST00000396981.6@UBE2G1	ENST00000396981.6	protein_coding	4366271,4307021,4296717,4289230,4282798,4269259	4366482,4307123,4296814,4289408,4282921,4272516	Gene ID= ENSG00000132388.12 TPM= 19.12 Transcript Type= protein_coding
chr17	4271980	4366628	4271980	4366628	-	ENST00000572484.5@UBE2G1	ENST00000572484.5	protein_coding	4366271,4331774,4307021,4296717,4289230,4282798,4271980	4366628,4331888,4307123,4296814,4289408,4282921,4272516	Gene ID= ENSG00000132388.12 TPM= 3.19 Transcript Type= protein_coding
chr17	4494443	4494982	4494443	4494982	+	transcript409.chr17.nnic@NA	transcript409.chr17.nnic	NA	4494443	4494982	Gene ID= novel_gene_chr17_410 TPM= 2.12 Transcript Type= NA
chr17	4498838	4539035	4498838	4539035	+	ENST00000329078.7@SPNS2	ENST00000329078.7	protein_coding	4498838,4513247,4525057,4530632,4531053,4532542,4532977,4533243,4533788,4536076,4536263,4536900,4537453	4499417,4513312,4525193,4530783,4531119,4532684,4533129,4533432,4533853,4536174,4536426,4536946,4539035	Gene ID= ENSG00000183018.8 TPM= 3.19 Transcript Type= protein_coding
chr17	4536762	4539035	4536762	4539035	+	ENST00000570979.1@SPNS2	ENST00000570979.1	protein_coding	4536762,4537453	4536946,4539035	Gene ID= ENSG00000183018.8 TPM= 9.56 Transcript Type= retained_intron
chr17	4538897	4555386	4538897	4555386	-	ENST00000381556.6@MYBBP1A	ENST00000381556.6	protein_coding	4555127,4554861,4554195,4554019,4553810,4552451,4552125,4551880,4550058,4549332,4548524,4548143,4547958,4545846,4545610,4545259,4545026,4544751,4544489,4542913,4542616,4542464,4541784,4541463,4540348,4539439,4538897	4555386,4554956,4554278,4554093,4553917,4552626,4552292,4551997,4550353,4549442,4548649,4548310,4548057,4545942,4545761,4545345,4545175,4544921,4544646,4543165,4542741,4542532,4541891,4541564,4540484,4539967,4538975	Gene ID= ENSG00000132382.14 TPM= 3.19 Transcript Type= protein_coding
chr17	4538902	4555631	4538902	4555631	-	ENST00000254718.8@MYBBP1A	ENST00000254718.8	protein_coding	4555127,4554861,4554195,4554019,4553810,4552451,4552125,4551880,4550058,4549332,4548524,4548143,4547958,4545846,4545610,4545259,4545026,4544751,4544489,4542913,4542616,4542464,4541784,4541463,4540348,4538902	4555631,4554956,4554278,4554093,4553917,4552626,4552292,4551997,4550353,4549442,4548649,4548310,4548057,4545942,4545761,4545345,4545175,4544921,4544646,4543165,4542741,4542532,4541891,4541564,4540484,4539967	Gene ID= ENSG00000132382.14 TPM= 6.37 Transcript Type= protein_coding
chr17	4538906	4542423	4538906	4542423	-	ENST00000574934.5@MYBBP1A	ENST00000574934.5	protein_coding	4541784,4541463,4540348,4538906	4542423,4541564,4540484,4539967	Gene ID= ENSG00000132382.14 TPM= 5.31 Transcript Type= retained_intron
chr17	4584505	4608314	4584505	4608314	+	transcript425.chr17.nic@SMTNL2	transcript425.chr17.nic	protein_coding	4584505,4592361,4593822,4595145,4596860,4597172,4607361	4585004,4592448,4593897,4595327,4596977,4597323,4608314	Gene ID= ENSG00000188176.11 TPM= 3.54 Transcript Type= NA
chr17	4583999	4608319	4583999	4608319	+	ENST00000338859.8@SMTNL2	ENST00000338859.8	protein_coding	4583999,4592361,4592929,4593822,4595145,4596860,4597172,4607361	4584098,4592448,4593171,4593897,4595327,4596977,4597323,4608319	Gene ID= ENSG00000188176.11 TPM= 9.38 Transcript Type= protein_coding
chr17	4584539	4608314	4584539	4608314	+	ENST00000389313.8@SMTNL2	ENST00000389313.8	protein_coding	4584539,4592361,4592929,4593822,4595145,4596860,4597172,4607361	4585004,4592448,4593171,4593897,4595327,4596977,4597323,4608314	Gene ID= ENSG00000188176.11 TPM= 7.25 Transcript Type= protein_coding
chr17	4671385	4704135	4671385	4704135	-	transcript427.chr17.nnic@PELP1	transcript427.chr17.nnic	protein_coding	4703863,4691378,4690888,4682803,4682502,4676357,4676036,4675797,4675274,4675079,4674809,4674510,4673619,4673250,4671691,4671385	4704135,4691442,4690993,4682952,4682573,4676507,4676162,4675884,4675362,4675195,4674956,4674669,4673674,4673456,4673145,4671531	Gene ID= ENSG00000141456.14 TPM= 22.31 Transcript Type= NA
chr17	4692642	4694508	4692642	4694508	+	transcript433.chr17.nnic@NA	transcript433.chr17.nnic	NA	4692642	4694508	Gene ID= novel_gene_chr17_434 TPM= 2.12 Transcript Type= NA
chr17	4696921	4698650	4696921	4698650	+	transcript435.chr17.nnic@NA	transcript435.chr17.nnic	NA	4696921	4698650	Gene ID= novel_gene_chr17_436 TPM= 2.12 Transcript Type= NA
chr17	4710632	4721496	4710632	4721496	+	transcript439.chr17.nic@ARRB2	transcript439.chr17.nic	protein_coding	4710632,4715973,4716147,4716412,4717217,4717685,4717888,4719283,4720216,4720393,4720586,4720946	4710744,4716033,4716191,4716608,4717276,4717752,4718684,4719420,4720299,4720472,4720640,4721496	Gene ID= ENSG00000141480.17 TPM= 5.31 Transcript Type= NA
chr17	4731434	4733610	4731434	4733610	+	ENST00000293777.5@MED11	ENST00000293777.5	protein_coding	4731434,4731776,4733050	4731574,4731906,4733610	Gene ID= ENSG00000161920.9 TPM= 13.81 Transcript Type= protein_coding
chr17	4796144	4798502	4796144	4798502	+	ENST00000614486.4@PSMB6	ENST00000614486.4	protein_coding	4796144,4796728,4797438,4797682,4798009,4798260	4796296,4796795,4797569,4797811,4798153,4798502	Gene ID= ENSG00000142507.9 TPM= 152.95 Transcript Type= protein_coding
chr17	4796144	4798503	4796144	4798503	+	ENST00000270586.7@PSMB6	ENST00000270586.7	protein_coding	4796144,4796728,4797438,4797682,4798009,4798280	4796296,4796795,4797569,4797811,4798153,4798503	Gene ID= ENSG00000142507.9 TPM= 527.89 Transcript Type= protein_coding
chr17	4807096	4823434	4807096	4823434	+	ENST00000263088.10@PLD2	ENST00000263088.10	protein_coding	4807096,4807772,4807984,4808274,4809100,4809298,4809493,4809691,4809877,4810802,4814418,4814633,4815476,4815764,4816620,4816937,4817146,4818002,4818297,4818494,4818774,4819084,4819429,4821793,4822640	4807225,4807881,4808114,4808416,4809205,4809363,4809551,4809783,4810029,4810951,4814501,4814711,4815586,4815934,4816746,4817055,4817259,4818106,4818385,4818607,4818823,4819218,4819582,4821907,4823434	Gene ID= ENSG00000129219.13 TPM= 1.06 Transcript Type= protein_coding
chr17	4807138	4811299	4807138	4811299	+	transcript458.chr17.nic@PLD2	transcript458.chr17.nic	protein_coding	4807138,4807772,4807984,4808274,4809100,4809298,4809493,4809691,4809877,4810802	4807225,4807881,4808114,4808416,4809205,4809363,4809551,4809783,4810029,4811299	Gene ID= ENSG00000129219.13 TPM= 3.19 Transcript Type= NA
chr17	4807169	4823428	4807169	4823428	+	ENST00000572940.5@PLD2	ENST00000572940.5	protein_coding	4807169,4807772,4807984,4808274,4809100,4809298,4809493,4809691,4809877,4810802,4814418,4814633,4815476,4815764,4816620,4816937,4817146,4818002,4818297,4818494,4818774,4819084,4819429,4821793,4822640	4807225,4807881,4808114,4808416,4809205,4809363,4809551,4809783,4810029,4810951,4814501,4814711,4815586,4815934,4816746,4817055,4817259,4818106,4818385,4818607,4818823,4819218,4819549,4821907,4823428	Gene ID= ENSG00000129219.13 TPM= 1.06 Transcript Type= protein_coding
chr17	4937130	4940251	4937130	4940251	-	ENST00000225665.11@SLC25A11	ENST00000225665.11	protein_coding	4939816,4939060,4938769,4938512,4938339,4938154,4938023,4937130	4940251,4939212,4938975,4938602,4938429,4938253,4938074,4937896	Gene ID= ENSG00000108528.13 TPM= 65.32 Transcript Type= protein_coding
chr17	4937317	4940030	4937317	4940030	-	ENST00000574710.1@SLC25A11	ENST00000574710.1	protein_coding	4938769,4938512,4938339,4938154,4938023,4937317	4940030,4938602,4938429,4938253,4938074,4937896	Gene ID= ENSG00000108528.13 TPM= 150.83 Transcript Type= retained_intron
chr17	4940152	4945222	4940152	4945222	+	transcript462.chr17.nic@RNF167	transcript462.chr17.nic	protein_coding	4940152,4940487,4940873,4941077,4942341,4942577,4942851,4943179,4943426,4944558,4944715	4940360,4940726,4940993,4941157,4942466,4942664,4942941,4943284,4943519,4944638,4945222	Gene ID= ENSG00000108523.15 TPM= 4.23 Transcript Type= NA
chr17	4940048	4945222	4940048	4945222	+	transcript463.chr17.nic@RNF167	transcript463.chr17.nic	protein_coding	4940048,4940487,4940923,4941077,4942341,4942577,4942851,4943179,4943426,4944558,4944715	4940360,4940726,4940993,4941157,4942466,4942664,4942941,4943284,4943519,4944638,4945222	Gene ID= ENSG00000108523.15 TPM= 2.95 Transcript Type= NA
chr17	4939995	4945222	4939995	4945222	+	transcript467.chr17.nic@RNF167	transcript467.chr17.nic	protein_coding	4939995,4940487,4941077,4942341,4942577,4942851,4943179,4943426,4944558,4944715	4940230,4940993,4941157,4942466,4942664,4942941,4943284,4943519,4944638,4945222	Gene ID= ENSG00000108523.15 TPM= 9.54 Transcript Type= NA
chr17	4940069	4945222	4940069	4945222	+	transcript469.chr17.nnic@RNF167	transcript469.chr17.nnic	protein_coding	4940069,4940923,4941077,4942341,4942577,4942851,4943179,4943426,4944558,4944715	4940360,4940993,4941157,4942466,4942664,4942941,4943284,4943519,4944638,4945222	Gene ID= ENSG00000108523.15 TPM= 8.26 Transcript Type= NA
chr17	4940077	4945222	4940077	4945222	+	transcript470.chr17.nnic@RNF167	transcript470.chr17.nnic	protein_coding	4940077,4940923,4941077,4942341,4942577,4942851,4943179,4943426,4944558,4944715	4940230,4940993,4941157,4942466,4942664,4942941,4943284,4943519,4944638,4945222	Gene ID= ENSG00000108523.15 TPM= 8.26 Transcript Type= NA
chr17	4940077	4945222	4940077	4945222	+	transcript471.chr17.nic@RNF167	transcript471.chr17.nic	protein_coding	4940077,4940873,4941077,4942341,4942577,4942851,4943179,4943426,4944558,4944715	4940360,4940993,4941157,4942466,4942664,4942941,4943284,4943519,4944638,4945222	Gene ID= ENSG00000108523.15 TPM= 10.6 Transcript Type= NA
chr17	4940083	4945222	4940083	4945222	+	transcript472.chr17.nic@RNF167	transcript472.chr17.nic	protein_coding	4940083,4940873,4941077,4942341,4942577,4942851,4943179,4943426,4944558,4944715	4940230,4940993,4941157,4942466,4942664,4942941,4943284,4943519,4944638,4945222	Gene ID= ENSG00000108523.15 TPM= 6.35 Transcript Type= NA
chr17	4940093	4945222	4940093	4945222	+	transcript474.chr17.nnic@RNF167	transcript474.chr17.nnic	protein_coding	4940093,4941077,4942341,4942577,4942851,4943179,4943426,4944558,4944715	4940230,4941157,4942466,4942664,4942941,4943284,4943519,4944638,4945222	Gene ID= ENSG00000108523.15 TPM= 7.2 Transcript Type= NA
chr17	4940128	4945222	4940128	4945222	+	ENST00000262482.10@RNF167	ENST00000262482.10	protein_coding	4940128,4940487,4941077,4942341,4942577,4942851,4943179,4943426,4944558,4944715	4940360,4940993,4941157,4942466,4942664,4942941,4943284,4943519,4944638,4945222	Gene ID= ENSG00000108523.15 TPM= 29.72 Transcript Type= protein_coding
chr17	4945652	4949014	4945652	4949014	-	ENST00000225655.5@PFN1	ENST00000225655.5	protein_coding	4948263,4946628,4945652	4949014,4946820,4945997	Gene ID= ENSG00000108518.7 TPM= 252.79 Transcript Type= protein_coding
chr17	4950541	4957129	4950541	4957129	+	transcript496.chr17.nic@ENO3	transcript496.chr17.nic	protein_coding	4950541,4951828,4952795,4953051,4953272,4953712,4955075,4955407,4955942,4956573,4956831,4956978	4950630,4951914,4952890,4953109,4953341,4953845,4955297,4955604,4956143,4956681,4956889,4957129	Gene ID= ENSG00000108515.17 TPM= 51.04 Transcript Type= NA
chr17	4951070	4957129	4951070	4957129	+	transcript501.chr17.nic@ENO3	transcript501.chr17.nic	protein_coding	4951070,4951828,4952795,4953051,4953272,4953712,4955075,4955407,4955942,4956573,4956831,4956978	4951182,4951914,4952890,4953109,4953341,4953845,4955297,4955604,4956143,4956681,4956889,4957129	Gene ID= ENSG00000108515.17 TPM= 660.72 Transcript Type= NA
chr17	4951095	4957131	4951095	4957131	+	ENST00000323997.10@ENO3	ENST00000323997.10	protein_coding	4951095,4951828,4952795,4953051,4953272,4953712,4955075,4955407,4955942,4956573,4956831,4956978	4951224,4951914,4952890,4953109,4953341,4953845,4955297,4955604,4956143,4956681,4956889,4957131	Gene ID= ENSG00000108515.17 TPM= 190.18 Transcript Type= protein_coding
chr17	4951119	4957127	4951119	4957127	+	ENST00000519584.5@ENO3	ENST00000519584.5	protein_coding	4951119,4951828,4952795,4953712,4955075,4955407,4955942,4956573,4956831,4956978	4951182,4951914,4952890,4953845,4955297,4955604,4956143,4956681,4956889,4957127	Gene ID= ENSG00000108515.17 TPM= 11.79 Transcript Type= protein_coding
chr17	4951758	4957118	4951758	4957118	+	ENST00000518175.1@ENO3	ENST00000518175.1	protein_coding	4951758,4952795,4953051,4953272,4953712,4955075,4955407,4955942,4956573,4956831,4956978	4951914,4952890,4953109,4953341,4953845,4955297,4955604,4956143,4956681,4956889,4957118	Gene ID= ENSG00000108515.17 TPM= 3.61 Transcript Type= protein_coding
chr17	4959228	4967872	4959228	4967872	-	ENST00000206020.7@SPAG7	ENST00000206020.7	protein_coding	4967720,4960786,4960459,4960234,4960022,4959760,4959228	4967872,4960853,4960547,4960318,4960111,4959916,4959643	Gene ID= ENSG00000091640.7 TPM= 104.8 Transcript Type= protein_coding
chr17	4959226	4967790	4959226	4967790	-	ENST00000575142.5@SPAG7	ENST00000575142.5	protein_coding	4967720,4960786,4960459,4960234,4960022,4959226	4967790,4960853,4960547,4960318,4960111,4959916	Gene ID= ENSG00000091640.7 TPM= 6.02 Transcript Type= protein_coding
chr17	4967997	4980622	4967997	4980622	-	transcript520.chr17.nic@CAMTA2	transcript520.chr17.nic	protein_coding	4979684,4978504,4977058,4974385,4973585,4973175,4972769,4972232,4970340,4969902,4969630,4969150,4968907,4967997	4980622,4978630,4977192,4974500,4973769,4973253,4972991,4972536,4970536,4970085,4969701,4969337,4968981,4968819	Gene ID= ENSG00000108509.20 TPM= 71.16 Transcript Type= NA
chr17	4988130	4998149	4988130	4998149	-	transcript556.chr17.nnic@INCA1	transcript556.chr17.nnic	protein_coding	4997496,4994394,4990152,4989890,4989428,4988779,4988130	4998149,4994475,4990265,4989929,4989624,4988944,4988554	Gene ID= ENSG00000196388.8 TPM= 3.19 Transcript Type= NA
chr17	4997642	5020831	4997642	5020831	+	transcript539.chr17.nic@KIF1C	transcript539.chr17.nic	protein_coding	4997642,4999850,5000220,5000772,5001222,5002059,5002464,5002731,5003612,5003851,5003998,5004567,5004855,5006915,5007263,5007467,5013653,5014743,5019996,5020492,5020806	4998156,4999970,5000352,5000848,5001401,5002124,5002642,5002842,5003689,5003916,5004073,5004645,5005000,5007084,5007342,5007542,5013732,5014837,5020079,5020678,5020831	Gene ID= ENSG00000129250.11 TPM= 56.83 Transcript Type= NA
chr17	4997948	5028401	4997948	5028401	+	ENST00000320785.9@KIF1C	ENST00000320785.9	protein_coding	4997948,4999850,5000220,5000772,5001222,5002059,5002464,5002731,5003612,5003851,5003998,5004567,5004855,5006915,5007263,5007467,5013653,5014743,5019996,5020492,5020806,5022092,5023468	4998156,4999970,5000352,5000848,5001401,5002124,5002642,5002842,5003689,5003916,5004073,5004645,5005000,5007084,5007342,5007542,5013732,5014837,5020079,5020678,5020878,5022709,5028401	Gene ID= ENSG00000129250.11 TPM= 108.34 Transcript Type= protein_coding
chr17	5078248	5096374	5078248	5096374	+	ENST00000318833.3@ZFP3	ENST00000318833.3	protein_coding	5078248,5091497	5078575,5096374	Gene ID= ENSG00000180787.5 TPM= 36.11 Transcript Type= protein_coding
chr17	5105635	5123102	5105635	5123102	-	ENST00000250076.7@ZNF232	ENST00000250076.7	protein_coding	5122977,5111800,5109394,5108926,5105635	5123102,5112351,5109868,5109052,5106533	Gene ID= ENSG00000167840.13 TPM= 1.06 Transcript Type= protein_coding
chr17	5111029	5111883	5111029	5111883	-	transcript573.chr17.nic@ZNF232	transcript573.chr17.nic	protein_coding	5111800,5111029	5111883,5111219	Gene ID= ENSG00000167840.13 TPM= 2.12 Transcript Type= NA
chr17	5111932	5114377	5111932	5114377	+	ENST00000413077.1@AC012146.1	ENST00000413077.1	processed_transcript	5111932,5113386,5114158	5112118,5113452,5114377	Gene ID= ENSG00000234327.7 TPM= 9.56 Transcript Type= antisense_RNA
chr17	5188752	5191855	5188752	5191855	-	transcript574.chr17.nnic@NA	transcript574.chr17.nnic	NA	5188752	5191855	Gene ID= novel_gene_chr17_575 TPM= 3.19 Transcript Type= NA
chr17	5282259	5378198	5282259	5378198	+	transcript593.chr17.nic@RABEP1	transcript593.chr17.nic	protein_coding	5282259,5308694,5331949,5335184,5338019,5346790,5350451,5354359,5361208,5362912,5365122,5368370,5373314,5377116,5378177	5282520,5308822,5332152,5335344,5338138,5346925,5350629,5354490,5361675,5363016,5365238,5368468,5373454,5377305,5378198	Gene ID= ENSG00000029725.16 TPM= 4.25 Transcript Type= NA
chr17	5282259	5336689	5282259	5336689	+	transcript601.chr17.nic@RABEP1	transcript601.chr17.nic	protein_coding	5282259,5308694,5331949,5335184,5336488	5282520,5308822,5332152,5335344,5336689	Gene ID= ENSG00000029725.16 TPM= 5.31 Transcript Type= NA
chr17	5282259	5338599	5282259	5338599	+	transcript602.chr17.nic@RABEP1	transcript602.chr17.nic	protein_coding	5282259,5308694,5331949,5335184,5338019	5282520,5308822,5332152,5335344,5338599	Gene ID= ENSG00000029725.16 TPM= 3.19 Transcript Type= NA
chr17	5282300	5385812	5282300	5385812	+	ENST00000537505.5@RABEP1	ENST00000537505.5	protein_coding	5282300,5308694,5331949,5335184,5338019,5346790,5350451,5354359,5361208,5362912,5365122,5368370,5373314,5377116,5378177,5380364,5381389,5383122	5282520,5308822,5332152,5335344,5338138,5346925,5350629,5354490,5361675,5363016,5365238,5368468,5373454,5377305,5378232,5380462,5381505,5385812	Gene ID= ENSG00000029725.16 TPM= 21.24 Transcript Type= protein_coding
chr17	5295332	5298812	5295332	5298812	-	transcript606.chr17.nnic@NA	transcript606.chr17.nnic	NA	5295332	5298812	Gene ID= novel_gene_chr17_607 TPM= 2.12 Transcript Type= NA
chr17	5386026	5420160	5386026	5420160	-	ENST00000573584.5@NUP88	ENST00000573584.5	protein_coding	5419354,5416513,5414009,5410703,5408733,5405057,5404099,5399552,5394891,5391561,5388802,5387779,5387605,5387386,5386984,5386708,5386026	5420160,5416682,5414134,5410789,5408909,5405243,5404246,5399650,5394981,5391662,5388960,5387904,5387670,5387466,5387110,5386826,5386269	Gene ID= ENSG00000108559.11 TPM= 4.25 Transcript Type= protein_coding
chr17	5419641	5432876	5419641	5432876	+	ENST00000381209.7@RPAIN	ENST00000381209.7	protein_coding	5419641,5421296,5422769,5425971,5426236,5428071,5432542	5420291,5421466,5422829,5426082,5426299,5428211,5432876	Gene ID= ENSG00000129197.14 TPM= 27.4 Transcript Type= protein_coding
chr17	5419641	5432876	5419641	5432876	+	ENST00000381208.9@RPAIN	ENST00000381208.9	protein_coding	5419641,5421296,5422769,5425971,5426236,5432542	5420291,5421466,5422829,5426082,5426299,5432876	Gene ID= ENSG00000129197.14 TPM= 15.72 Transcript Type= protein_coding
chr17	5419641	5432876	5419641	5432876	+	ENST00000571558.5@RPAIN	ENST00000571558.5	protein_coding	5419641,5421296,5422769,5426236,5428071,5432542	5420291,5421466,5422829,5426299,5428211,5432876	Gene ID= ENSG00000129197.14 TPM= 15.72 Transcript Type= nonsense_mediated_decay
chr17	5419641	5432876	5419641	5432876	+	ENST00000571043.5@RPAIN	ENST00000571043.5	protein_coding	5419641,5421296,5422769,5425971,5432542	5420291,5421466,5422829,5426299,5432876	Gene ID= ENSG00000129197.14 TPM= 11.47 Transcript Type= retained_intron
chr17	5419641	5432876	5419641	5432876	+	ENST00000573577.5@RPAIN	ENST00000573577.5	protein_coding	5419641,5421296,5422769,5426236,5432542	5420291,5421466,5422829,5426299,5432876	Gene ID= ENSG00000129197.14 TPM= 11.47 Transcript Type= nonsense_mediated_decay
chr17	5419641	5432715	5419641	5432715	+	ENST00000536255.6@RPAIN	ENST00000536255.6	protein_coding	5419641,5421296,5422769,5432542	5420291,5421466,5422829,5432715	Gene ID= ENSG00000129197.14 TPM= 16.99 Transcript Type= protein_coding
chr17	5432777	5439155	5432777	5439155	-	ENST00000225698.8@C1QBP	ENST00000225698.8	protein_coding	5438842,5438123,5434873,5433669,5433293,5432777	5439155,5438273,5434966,5433767,5433415,5433164	Gene ID= ENSG00000108561.8 TPM= 421.68 Transcript Type= protein_coding
chr17	5474290	5486217	5474290	5486217	-	transcript632.chr17.nnic@DERL2	transcript632.chr17.nnic	protein_coding	5486069,5485151,5482809,5481296,5480387,5480054,5477848,5474290	5486217,5485216,5482882,5481389,5480582,5480144,5477999,5474789	Gene ID= ENSG00000072849.10 TPM= 4.25 Transcript Type= NA
chr17	5471251	5486217	5471251	5486217	-	ENST00000158771.8@DERL2	ENST00000158771.8	protein_coding	5486069,5485151,5482809,5481296,5480387,5480054,5471251	5486217,5485216,5482882,5481389,5480582,5480144,5474789	Gene ID= ENSG00000072849.10 TPM= 7.44 Transcript Type= protein_coding
chr17	5476398	5479524	5476398	5479524	+	transcript645.chr17.nnic@NA	transcript645.chr17.nnic	NA	5476398	5479524	Gene ID= novel_gene_chr17_646 TPM= 13.81 Transcript Type= NA
chr17	5486374	5490808	5486374	5490808	+	ENST00000611091.4@MIS12	ENST00000611091.4	protein_coding	5486374,5488196,5488823	5486684,5488589,5490808	Gene ID= ENSG00000167842.15 TPM= 6.9 Transcript Type= protein_coding
chr17	5486902	5490808	5486902	5490808	+	transcript648.chr17.nnic@MIS12	transcript648.chr17.nnic	protein_coding	5486902,5487589,5488823	5487377,5488589,5490808	Gene ID= ENSG00000167842.15 TPM= 3.72 Transcript Type= NA
chr17	6640758	6644541	6640758	6644541	+	ENST00000250101.9@TXNDC17	ENST00000250101.9	protein_coding	6640758,6641753,6642249,6642951	6641227,6641834,6642324,6644541	Gene ID= ENSG00000129235.10 TPM= 41.42 Transcript Type= protein_coding
chr17	6641016	6643114	6641016	6643114	+	ENST00000570330.5@TXNDC17	ENST00000570330.5	protein_coding	6641016,6641753,6642249,6642951	6641152,6641834,6642324,6643114	Gene ID= ENSG00000129235.10 TPM= 7.44 Transcript Type= protein_coding
chr17	6643315	6651634	6643315	6651634	-	ENST00000225728.7@MED31	ENST00000225728.7	protein_coding	6651501,6650356,6649982,6643315	6651634,6650433,6650078,6644659	Gene ID= ENSG00000108590.10 TPM= 10.62 Transcript Type= protein_coding
chr17	6644279	6651634	6644279	6651634	-	ENST00000575197.1@MED31	ENST00000575197.1	protein_coding	6651501,6650356,6644279	6651634,6650433,6644659	Gene ID= ENSG00000108590.10 TPM= 1.06 Transcript Type= protein_coding
chr17	6651659	6653178	6651659	6653178	+	transcript672.chr17.nnic@NA	transcript672.chr17.nnic	NA	6651659	6653178	Gene ID= novel_gene_chr17_673 TPM= 2.12 Transcript Type= NA
chr17	6755840	6775647	6755840	6775647	+	ENST00000361842.7@XAF1	ENST00000361842.7	protein_coding	6755840,6758089,6759662,6760406,6762155,6770643,6773113	6756110,6758224,6759718,6760601,6762240,6770984,6775647	Gene ID= ENSG00000132530.16 TPM= 5.31 Transcript Type= protein_coding
chr17	6756042	6760368	6756042	6760368	+	transcript679.chr17.nic@XAF1	transcript679.chr17.nic	protein_coding	6756042,6758089	6756110,6760368	Gene ID= ENSG00000132530.16 TPM= 4.25 Transcript Type= NA
chr17	6994758	6996784	6994758	6996784	-	transcript681.chr17.nnic@NA	transcript681.chr17.nnic	NA	6994758	6996784	Gene ID= novel_gene_chr17_682 TPM= 2.12 Transcript Type= NA
chr17	7012632	7014532	7012632	7014532	+	ENST00000552039.2@RNASEK	ENST00000552039.2	protein_coding	7012632,7013666,7014145	7012757,7013742,7014532	Gene ID= ENSG00000219200.11 TPM= 116.84 Transcript Type= protein_coding
chr17	7012660	7017520	7012660	7017520	+	ENST00000547863.5@RNASEK-C17orf49	ENST00000547863.5	protein_coding	7012660,7013666,7014145,7015062,7015774,7016495,7016910,7017261	7012757,7013742,7014878,7015156,7015875,7016685,7017014,7017520	Gene ID= ENSG00000161939.19 TPM= 14.34 Transcript Type= retained_intron
chr17	7014772	7017520	7014772	7017520	+	transcript695.chr17.nic@C17orf49	transcript695.chr17.nic	protein_coding	7014772,7015062,7016495,7017257	7014878,7015156,7016685,7017520	Gene ID= ENSG00000258315.5 TPM= 4.25 Transcript Type= NA
chr17	7014769	7017519	7014769	7017519	+	ENST00000552402.5@C17orf49	ENST00000552402.5	protein_coding	7014769,7015062,7016495,7016910,7017261	7014878,7015156,7016685,7017014,7017519	Gene ID= ENSG00000258315.5 TPM= 4.96 Transcript Type= protein_coding
chr17	7014753	7017506	7014753	7017506	+	ENST00000546760.5@C17orf49	ENST00000546760.5	protein_coding	7014753,7015062,7015774,7016495,7017257	7014878,7015156,7015875,7016685,7017506	Gene ID= ENSG00000258315.5 TPM= 3.19 Transcript Type= protein_coding
chr17	7014782	7017520	7014782	7017520	+	ENST00000439424.6@C17orf49	ENST00000439424.6	protein_coding	7014782,7015062,7015774,7016495,7016910,7017261	7014878,7015156,7015875,7016685,7017014,7017520	Gene ID= ENSG00000258315.5 TPM= 10.09 Transcript Type= protein_coding
chr17	7014754	7017525	7014754	7017525	+	ENST00000549857.1@C17orf49	ENST00000549857.1	protein_coding	7014754,7015062,7017261	7014878,7017014,7017525	Gene ID= ENSG00000258315.5 TPM= 1.41 Transcript Type= retained_intron
chr17	7015818	7019630	7015818	7019630	-	ENST00000443997.1@MIR497HG	ENST00000443997.1	antisense_RNA	7019378,7017069,7015818	7019630,7017388,7016014	Gene ID= ENSG00000267532.5 TPM= 3.19 Transcript Type= antisense_RNA
chr17	7023099	7029642	7023099	7029642	+	transcript701.chr17.nic@BCL6B	transcript701.chr17.nic	protein_coding	7023099,7024083,7024401,7025076,7026457,7026705,7026950,7027503	7023850,7024304,7024763,7025200,7026621,7026835,7027087,7029642	Gene ID= ENSG00000161940.10 TPM= 7.44 Transcript Type= NA
chr17	7041630	7043923	7041630	7043923	-	ENST00000308009.5@SLC16A11	ENST00000308009.5	protein_coding	7043312,7042930,7041996,7041630	7043923,7043073,7042763,7041908	Gene ID= ENSG00000174326.11 TPM= 1.06 Transcript Type= protein_coding
chr17	7074566	7080266	7074566	7080266	-	ENST00000416562.6@CLEC10A	ENST00000416562.6	protein_coding	7080052,7078746,7077997,7076892,7076733,7075985,7075731,7075360,7074566	7080266,7078885,7078113,7076987,7076804,7076071,7075885,7075466,7075222	Gene ID= ENSG00000132514.13 TPM= 1.06 Transcript Type= protein_coding
chr17	7074796	7080283	7074796	7080283	-	ENST00000571664.1@CLEC10A	ENST00000571664.1	protein_coding	7080052,7078746,7077997,7076892,7076733,7075976,7075731,7075360,7074796	7080283,7078885,7078113,7076987,7076804,7076071,7075885,7075466,7075222	Gene ID= ENSG00000132514.13 TPM= 1.06 Transcript Type= protein_coding
chr17	7219806	7225273	7219806	7225273	+	ENST00000356839.9@ACADVL	ENST00000356839.9	protein_coding	7219806,7220122,7220464,7220604,7220766,7220924,7221538,7221952,7222177,7222667,7223133,7223644,7223813,7223968,7224146,7224321,7224480,7224642,7224809,7224957	7220046,7220197,7220529,7220676,7220830,7221058,7221682,7222081,7222302,7222865,7223237,7223730,7223875,7224069,7224243,7224393,7224552,7224714,7224884,7225273	Gene ID= ENSG00000072778.19 TPM= 1363.24 Transcript Type= protein_coding
chr17	7219863	7225264	7219863	7225264	+	ENST00000350303.9@ACADVL	ENST00000350303.9	protein_coding	7219863,7220122,7220604,7220766,7220924,7221538,7221952,7222177,7222667,7223133,7223644,7223813,7223968,7224146,7224321,7224480,7224642,7224809,7224957	7220046,7220197,7220676,7220830,7221058,7221682,7222081,7222302,7222865,7223237,7223730,7223875,7224069,7224243,7224393,7224552,7224714,7224884,7225264	Gene ID= ENSG00000072778.19 TPM= 109.54 Transcript Type= protein_coding
chr17	7224633	7225266	7224633	7225266	+	ENST00000578033.1@ACADVL	ENST00000578033.1	protein_coding	7224633,7224957	7224884,7225266	Gene ID= ENSG00000072778.19 TPM= 20.18 Transcript Type= retained_intron
chr17	7225341	7234545	7225341	7234545	-	ENST00000005340.9@DVL2	ENST00000005340.9	protein_coding	7234069,7230728,7230285,7230046,7229808,7229588,7229378,7229135,7228969,7227977,7227655,7227404,7227090,7226421,7225341	7234545,7230797,7230430,7230155,7229943,7229678,7229447,7229274,7229045,7228044,7227783,7227535,7227269,7226639,7226313	Gene ID= ENSG00000004975.11 TPM= 23.37 Transcript Type= protein_coding
chr17	7235038	7238297	7235038	7238297	-	transcript805.chr17.nic@PHF23	transcript805.chr17.nic	protein_coding	7238053,7237629,7237385,7235930,7235038	7238297,7237660,7237477,7236767,7235840	Gene ID= ENSG00000040633.12 TPM= 3.1 Transcript Type= NA
chr17	7235038	7239455	7235038	7239455	-	ENST00000576955.5@PHF23	ENST00000576955.5	protein_coding	7239246,7237385,7235930,7235038	7239455,7237477,7236767,7235840	Gene ID= ENSG00000040633.12 TPM= 2.04 Transcript Type= protein_coding
chr17	7235028	7239506	7235028	7239506	-	ENST00000320316.7@PHF23	ENST00000320316.7	protein_coding	7239246,7237629,7237385,7235930,7235028	7239506,7237660,7237477,7236767,7235840	Gene ID= ENSG00000040633.12 TPM= 21.51 Transcript Type= protein_coding
chr17	7235029	7239439	7235029	7239439	-	ENST00000571362.5@PHF23	ENST00000571362.5	protein_coding	7239246,7237629,7237385,7235930,7235029	7239439,7237660,7237477,7236566,7235840	Gene ID= ENSG00000040633.12 TPM= 2.04 Transcript Type= protein_coding
chr17	7240014	7242770	7240014	7242770	-	ENST00000302386.9@GABARAP	ENST00000302386.9	protein_coding	7242241,7241601,7241342,7240014	7242770,7241679,7241460,7240919	Gene ID= ENSG00000170296.9 TPM= 5.31 Transcript Type= protein_coding
chr17	7240408	7241819	7240408	7241819	-	ENST00000577035.5@GABARAP	ENST00000577035.5	protein_coding	7241768,7241601,7241342,7240408	7241819,7241679,7241460,7240919	Gene ID= ENSG00000170296.9 TPM= 46.74 Transcript Type= protein_coding
chr17	7243591	7251675	7243591	7251675	-	ENST00000574322.5@CTDNEP1	ENST00000574322.5	protein_coding	7251195,7247277,7247064,7246791,7246254,7246026,7244551,7243591	7251675,7247343,7247182,7246862,7246370,7246137,7244635,7244245	Gene ID= ENSG00000175826.11 TPM= 49.92 Transcript Type= protein_coding
chr17	7243618	7252081	7243618	7252081	-	ENST00000573600.5@CTDNEP1	ENST00000573600.5	protein_coding	7251965,7251195,7247277,7247064,7246791,7246254,7246026,7244551,7243618	7252081,7251601,7247343,7247182,7246862,7246370,7246137,7244635,7244245	Gene ID= ENSG00000175826.11 TPM= 6.37 Transcript Type= protein_coding
chr17	7252286	7259940	7252286	7259940	+	ENST00000396628.6@ELP5	ENST00000396628.6	protein_coding	7252286,7252770,7252918,7254583,7256857,7258588,7258826,7259571	7252596,7252830,7252998,7254803,7257038,7258683,7258926,7259940	Gene ID= ENSG00000170291.14 TPM= 15.93 Transcript Type= protein_coding
chr17	7252201	7259931	7252201	7259931	+	ENST00000356683.6@ELP5	ENST00000356683.6	protein_coding	7252201,7252426,7252770,7252918,7254583,7256857,7258588	7252337,7252596,7252830,7252998,7254803,7257038,7259931	Gene ID= ENSG00000170291.14 TPM= 2.12 Transcript Type= protein_coding
chr17	7252286	7259940	7252286	7259940	+	ENST00000574993.5@ELP5	ENST00000574993.5	protein_coding	7252286,7252770,7252918,7254583,7256857,7258588	7252596,7252830,7252998,7254803,7257038,7259940	Gene ID= ENSG00000170291.14 TPM= 6.37 Transcript Type= protein_coding
chr17	7252056	7254913	7252056	7254913	+	ENST00000574255.5@ELP5	ENST00000574255.5	protein_coding	7252056,7252426,7252770,7252918,7254583	7252082,7252596,7252830,7252998,7254913	Gene ID= ENSG00000170291.14 TPM= 10.62 Transcript Type= protein_coding
chr17	7252232	7259940	7252232	7259940	+	ENST00000396627.6@ELP5	ENST00000396627.6	protein_coding	7252232,7252426,7252770,7252918,7254583,7256857,7258588,7258826,7259571	7252337,7252596,7252830,7252998,7254803,7257038,7258683,7258926,7259940	Gene ID= ENSG00000170291.14 TPM= 11.68 Transcript Type= protein_coding
chr17	7281667	7288257	7281667	7288257	+	ENST00000317370.12@SLC2A4	ENST00000317370.12	protein_coding	7281667,7283245,7283473,7283738,7283974,7284217,7284485,7284835,7285088,7285705,7286426	7281967,7283361,7283645,7283862,7284089,7284379,7284672,7284939,7285189,7285908,7288257	Gene ID= ENSG00000181856.14 TPM= 90.28 Transcript Type= protein_coding
chr17	7281736	7286151	7281736	7286151	+	ENST00000571308.5@SLC2A4	ENST00000571308.5	protein_coding	7281736,7283245,7283473,7283738,7283974,7284217,7284485,7284835,7285088,7285705	7281967,7283361,7283645,7283862,7284089,7284379,7284672,7284939,7285189,7286151	Gene ID= ENSG00000181856.14 TPM= 4.25 Transcript Type= protein_coding
chr17	7288252	7294564	7288252	7294564	-	ENST00000007699.9@YBX2	ENST00000007699.9	protein_coding	7294230,7293475,7292026,7291093,7290251,7289968,7289530,7288749,7288252	7294564,7293538,7292059,7291182,7290535,7290071,7289725,7288838,7288643	Gene ID= ENSG00000006047.12 TPM= 2.12 Transcript Type= protein_coding
chr17	7307373	7312455	7307373	7312455	+	ENST00000336458.12@EIF5A	ENST00000336458.12	protein_coding	7307373,7309615,7311018,7311350,7311578,7311822	7307752,7309800,7311122,7311481,7311651,7312455	Gene ID= ENSG00000132507.17 TPM= 399.29 Transcript Type= protein_coding
chr17	7306999	7312463	7306999	7312463	+	ENST00000336452.11@EIF5A	ENST00000336452.11	protein_coding	7306999,7309615,7311018,7311350,7311578,7311822	7307115,7309800,7311122,7311481,7311651,7312463	Gene ID= ENSG00000132507.17 TPM= 45.94 Transcript Type= protein_coding
chr17	7307974	7312455	7307974	7312455	+	ENST00000419711.6@EIF5A	ENST00000419711.6	protein_coding	7307974,7309615,7311018,7311350,7311578,7311822	7308113,7309800,7311122,7311481,7311651,7312455	Gene ID= ENSG00000132507.17 TPM= 42.4 Transcript Type= protein_coding
chr17	7312660	7315343	7312660	7315343	-	ENST00000389167.9@GPS2	ENST00000389167.9	protein_coding	7314959,7314488,7314291,7314080,7313906,7313568,7313380,7313212,7313029,7312660	7315343,7314597,7314403,7314159,7313988,7313721,7313469,7313291,7313124,7312839	Gene ID= ENSG00000132522.15 TPM= 40.89 Transcript Type= protein_coding
chr17	7312659	7315321	7312659	7315321	-	ENST00000572172.5@GPS2	ENST00000572172.5	protein_coding	7314959,7314488,7314291,7314080,7313568,7313380,7313212,7313029,7312659	7315321,7314597,7314403,7314159,7313988,7313469,7313291,7313124,7312839	Gene ID= ENSG00000132522.15 TPM= 5.31 Transcript Type= retained_intron
chr17	7312661	7315400	7312661	7315400	-	transcript854.chr17.nic@AC026954.2	transcript854.chr17.nic	protein_coding	7315331,7314959,7314488,7314291,7314080,7313568,7313380,7313212,7313029,7312661	7315400,7315119,7314597,7314403,7314159,7313988,7313469,7313291,7313124,7312839	Gene ID= ENSG00000261915.6 TPM= 4.78 Transcript Type= NA
chr17	7315628	7329328	7315628	7329328	-	ENST00000399464.6@NEURL4	ENST00000399464.6	protein_coding	7329031,7327440,7327165,7326711,7326437,7326255,7325641,7325209,7324799,7324395,7324108,7323814,7323647,7323485,7322948,7322735,7321865,7321560,7321361,7321112,7320759,7319050,7318495,7318269,7318065,7317788,7317461,7317205,7315628	7329328,7327884,7327230,7327009,7326548,7326343,7325713,7325473,7324980,7324480,7324270,7324012,7323723,7323563,7323123,7322866,7322010,7321787,7321459,7321273,7320923,7319208,7318674,7318356,7318172,7317932,7317573,7317370,7316327	Gene ID= ENSG00000215041.9 TPM= 27.62 Transcript Type= protein_coding
chr17	7350317	7351476	7350317	7351476	+	ENST00000571471.5@ACAP1	ENST00000571471.5	protein_coding	7350317,7350950,7351295	7350404,7350999,7351476	Gene ID= ENSG00000072818.11 TPM= 1.06 Transcript Type= protein_coding
chr17	7350390	7351477	7350390	7351477	+	ENST00000570504.5@ACAP1	ENST00000570504.5	protein_coding	7350390,7350950,7351295	7350430,7350999,7351477	Gene ID= ENSG00000072818.11 TPM= 1.59 Transcript Type= protein_coding
chr17	7350421	7351477	7350421	7351477	+	ENST00000574499.1@ACAP1	ENST00000574499.1	protein_coding	7350421,7350950,7351295	7350599,7350999,7351477	Gene ID= ENSG00000072818.11 TPM= 1.59 Transcript Type= protein_coding
chr17	7352162	7354944	7352162	7354944	+	ENST00000333751.4@KCTD11	ENST00000333751.4	protein_coding	7352162	7354944	Gene ID= ENSG00000213859.4 TPM= 8.5 Transcript Type= protein_coding
chr17	7380534	7389774	7380534	7389774	+	ENST00000570896.5@TNK1	ENST00000570896.5	protein_coding	7380534,7380974,7382836,7383250,7383425,7383709,7383970,7384484,7386561,7386990,7387378,7388406,7388788,7388971	7380747,7381114,7383089,7383320,7383616,7383864,7384253,7384754,7386655,7387154,7387457,7388704,7388883,7389774	Gene ID= ENSG00000174292.12 TPM= 4.25 Transcript Type= protein_coding
chr17	7389727	7394842	7389727	7394842	-	ENST00000573070.5@PLSCR3	ENST00000573070.5	protein_coding	7394477,7394104,7393601,7393467,7392791,7390634,7389727	7394842,7394159,7393836,7393509,7392952,7390795,7390441	Gene ID= ENSG00000187838.16 TPM= 23.37 Transcript Type= nonsense_mediated_decay
chr17	7402975	7404137	7402975	7404137	-	transcript907.chr17.nic@TMEM256	transcript907.chr17.nic	protein_coding	7404000,7403627,7403310,7402975	7404137,7403689,7403390,7403209	Gene ID= ENSG00000205544.3 TPM= 3.19 Transcript Type= NA
chr17	7402975	7404137	7402975	7404137	-	ENST00000302422.3@TMEM256	ENST00000302422.3	protein_coding	7404000,7403658,7403310,7402975	7404137,7403689,7403390,7403209	Gene ID= ENSG00000205544.3 TPM= 44.61 Transcript Type= protein_coding
chr17	7435454	7437523	7435454	7437523	+	ENST00000396568.1@TMEM102	ENST00000396568.1	protein_coding	7435454,7436194	7436085,7437523	Gene ID= ENSG00000181284.2 TPM= 13.81 Transcript Type= protein_coding
chr17	7439027	7444937	7439027	7444937	+	ENST00000293829.8@FGF11	ENST00000293829.8	protein_coding	7439027,7441471,7441776,7442594,7443076	7439813,7441581,7441879,7442792,7444937	Gene ID= ENSG00000161958.10 TPM= 4.25 Transcript Type= protein_coding
chr17	7459366	7479625	7459366	7479625	-	ENST00000380599.8@ZBTB4	ENST00000380599.8	protein_coding	7479456,7467257,7465711,7459366	7479625,7467327,7466810,7463890	Gene ID= ENSG00000174282.11 TPM= 120.02 Transcript Type= protein_coding
chr17	7484366	7514616	7484366	7514616	+	ENST00000617998.4@POLR2A	ENST00000617998.4	protein_coding	7484366,7495941,7496210,7496440,7496764,7497356,7497650,7498078,7499039,7499281,7500639,7500940,7501289,7501526,7501900,7502518,7503121,7503385,7503586,7508251,7508944,7509532,7511215,7511406,7511811,7512158,7512477,7512774,7513021	7484857,7496073,7496346,7496613,7497045,7497517,7497870,7498210,7499163,7499491,7500848,7501108,7501383,7501729,7502122,7502701,7503292,7503490,7503791,7508475,7509190,7509632,7511319,7511588,7512014,7512344,7512590,7512923,7514616	Gene ID= ENSG00000181222.15 TPM= 37.18 Transcript Type= processed_transcript
chr17	7548891	7557890	7548891	7557890	+	ENST00000293825.10@TNFSF12	ENST00000293825.10	protein_coding	7548891,7549474,7550120,7550799,7550943,7556778,7557099	7549312,7549521,7550195,7550852,7550978,7556902,7557890	Gene ID= ENSG00000239697.10 TPM= 31.33 Transcript Type= protein_coding
chr17	7549058	7557890	7549058	7557890	+	ENST00000322272.11@TNFSF12	ENST00000322272.11	protein_coding	7549058,7549474,7550120,7550799,7550943,7553587,7556778,7557099	7549312,7549521,7550195,7550852,7550978,7553825,7556902,7557890	Gene ID= ENSG00000239697.10 TPM= 7.97 Transcript Type= nonsense_mediated_decay
chr17	7558160	7561600	7558160	7561600	+	transcript937.chr17.nic@TNFSF13	transcript937.chr17.nic	protein_coding	7558160,7559068,7559624,7559846,7560049,7560350,7560724	7558375,7559297,7559702,7559893,7560167,7560488,7561600	Gene ID= ENSG00000161955.16 TPM= 3.19 Transcript Type= NA
chr17	7558292	7561608	7558292	7561608	+	ENST00000380535.8@TNFSF13	ENST00000380535.8	protein_coding	7558292,7559848,7560049,7560350,7560724	7559297,7559893,7560167,7560488,7561608	Gene ID= ENSG00000161955.16 TPM= 1.06 Transcript Type= protein_coding
chr17	7561875	7571969	7561875	7571969	+	ENST00000321337.11@SENP3	ENST00000321337.11	protein_coding	7561875,7563066,7564625,7564959,7565440,7565717,7566927,7570356,7570681,7570883,7571373	7562263,7563791,7564864,7565070,7565587,7565764,7567004,7570493,7570764,7570933,7571969	Gene ID= ENSG00000161956.12 TPM= 48.86 Transcript Type= protein_coding
chr17	7563287	7578715	7563287	7578715	+	ENST00000614237.1@SENP3-EIF4A1	ENST00000614237.1	protein_coding	7563287,7564625,7564959,7565440,7565717,7566927,7570356,7570681,7570883,7571373,7572284,7574260,7574546,7575119,7576524,7577056,7577344,7577569,7577827,7578165,7578342	7563791,7564864,7565070,7565587,7565764,7567004,7570493,7570764,7570933,7571479,7572864,7574308,7574678,7575258,7576692,7577165,7577487,7577706,7577916,7578244,7578715	Gene ID= ENSG00000277957.1 TPM= 165.7 Transcript Type= nonsense_mediated_decay
chr17	7572826	7579005	7572826	7579005	+	ENST00000293831.12@EIF4A1	ENST00000293831.12	protein_coding	7572826,7574260,7574546,7575119,7576524,7577056,7577344,7577569,7577827,7578165,7578342	7572864,7574308,7574678,7575258,7576692,7577165,7577487,7577706,7577916,7578244,7579005	Gene ID= ENSG00000161960.14 TPM= 160.39 Transcript Type= protein_coding
chr17	7579467	7582113	7579467	7582113	+	ENST00000250092.10@CD68	ENST00000250092.10	protein_coding	7579467,7579810,7580466,7580711,7580896,7581378	7579726,7580327,7580585,7580783,7581066,7582113	Gene ID= ENSG00000129226.13 TPM= 10.62 Transcript Type= protein_coding
chr17	7581974	7583787	7581974	7583787	-	transcript986.chr17.nnic@AC016876.1	transcript986.chr17.nnic	antisense_RNA	7582900,7581974	7583787,7582163	Gene ID= ENSG00000233223.2 TPM= 3.19 Transcript Type= NA
chr17	7582012	7583010	7582012	7583010	-	ENST00000572046.1@AC016876.1	ENST00000572046.1	antisense_RNA	7582876,7582012	7583010,7582163	Gene ID= ENSG00000233223.2 TPM= 1.06 Transcript Type= antisense_RNA
chr17	7583647	7588192	7583647	7588192	+	ENST00000250124.10@MPDU1	ENST00000250124.10	protein_coding	7583647,7585732,7585946,7586692,7586899,7587161,7587426	7583965,7585797,7586078,7586777,7587017,7587271,7588192	Gene ID= ENSG00000129255.15 TPM= 16.46 Transcript Type= protein_coding
chr17	7583852	7588176	7583852	7588176	+	ENST00000572836.5@MPDU1	ENST00000572836.5	protein_coding	7583852,7585732,7585946,7586692,7586899,7587426	7583965,7585797,7586078,7586777,7587271,7588176	Gene ID= ENSG00000129255.15 TPM= 1.59 Transcript Type= retained_intron
chr17	7591230	7614867	7591230	7614867	-	ENST00000250113.11@FXR2	ENST00000250113.11	protein_coding	7614452,7606097,7605645,7604009,7603757,7602909,7601409,7595824,7594679,7594238,7593918,7593403,7592984,7592694,7592504,7592254,7591230	7614867,7606149,7605738,7604080,7603905,7603002,7601525,7595994,7594757,7594347,7594004,7593625,7593181,7592894,7592599,7592354,7591925	Gene ID= ENSG00000129245.11 TPM= 306.96 Transcript Type= protein_coding
chr17	7626234	7627855	7626234	7627855	-	ENST00000269298.9@SAT2	ENST00000269298.9	protein_coding	7627570,7627363,7627143,7626943,7626753,7626234	7627855,7627414,7627226,7627044,7626793,7626614	Gene ID= ENSG00000141504.11 TPM= 5.31 Transcript Type= protein_coding
chr17	7668402	7687481	7668402	7687481	-	ENST00000610292.4@TP53	ENST00000610292.4	protein_coding	7687377,7676382,7675994,7675053,7674859,7674181,7673701,7673535,7670609,7668402	7687481,7676622,7676272,7675236,7674971,7674290,7673837,7673608,7670715,7669690	Gene ID= ENSG00000141510.16 TPM= 10.62 Transcript Type= protein_coding
chr17	7685260	7686371	7685260	7686371	-	ENST00000571370.1@AC087388.1	ENST00000571370.1	sense_intronic	7685260	7686371	Gene ID= ENSG00000262251.1 TPM= 1.06 Transcript Type= sense_intronic
chr17	7688321	7703502	7688321	7703502	+	ENST00000396463.6@WRAP53	ENST00000396463.6	protein_coding	7688321,7688648,7689224,7689590,7700741,7701459,7701657,7702344,7702743,7702993,7703243	7688561,7689079,7689322,7689701,7700829,7701549,7701789,7702552,7702846,7703127,7703502	Gene ID= ENSG00000141499.16 TPM= 5.31 Transcript Type= protein_coding
chr17	7686301	7703502	7686301	7703502	+	ENST00000316024.9@WRAP53	ENST00000316024.9	protein_coding	7686301,7689224,7689590,7700741,7701459,7701657,7702344,7702743,7702993,7703243	7689079,7689322,7689701,7700829,7701549,7701789,7702552,7702846,7703127,7703502	Gene ID= ENSG00000141499.16 TPM= 2.12 Transcript Type= protein_coding
chr17	7839962	7853680	7839962	7853680	+	ENST00000448097.6@KDM6B	ENST00000448097.6	protein_coding	7839962,7844901,7845314,7845550,7845872,7846078,7846400,7846579,7846819,7847105,7847546,7849821,7850072,7851021,7851330,7851478,7851648,7851951,7852149,7852495,7853000,7853210,7853498	7840024,7845020,7845456,7845691,7845970,7846297,7846492,7846740,7847016,7847452,7849728,7849947,7850177,7851226,7851394,7851549,7851796,7852065,7852336,7852636,7853126,7853380,7853680	Gene ID= ENSG00000132510.10 TPM= 1.94 Transcript Type= protein_coding
chr17	7848272	7854432	7848272	7854432	+	transcript1003.chr17.nic@KDM6B	transcript1003.chr17.nic	protein_coding	7848272,7849821,7850072,7851021,7851330,7851478,7851648,7851951,7852149,7852495,7853000,7853210,7853498	7849728,7849947,7850177,7851226,7851394,7851549,7851796,7852065,7852336,7852636,7853126,7853380,7854432	Gene ID= ENSG00000132510.10 TPM= 4.07 Transcript Type= NA
chr17	7839904	7854796	7839904	7854796	+	ENST00000254846.9@KDM6B	ENST00000254846.9	protein_coding	7839904,7844901,7845314,7845550,7845872,7846078,7846400,7846579,7846819,7847105,7847546,7849821,7850072,7851021,7851330,7851478,7851648,7851951,7852149,7852495,7853000,7853210	7840024,7845020,7845456,7845691,7845970,7846297,7846492,7846740,7847016,7847452,7849728,7849947,7850177,7851226,7851394,7851549,7851796,7852065,7852336,7852636,7853126,7854796	Gene ID= ENSG00000132510.10 TPM= 23.72 Transcript Type= protein_coding
chr17	7855066	7856061	7855066	7856061	+	ENST00000574668.1@TMEM88	ENST00000574668.1	protein_coding	7855066,7855771	7855284,7856061	Gene ID= ENSG00000167874.6 TPM= 4.25 Transcript Type= protein_coding
chr17	7855065	7856099	7855065	7856099	+	ENST00000301599.6@TMEM88	ENST00000301599.6	protein_coding	7855065,7855445	7855284,7856099	Gene ID= ENSG00000167874.6 TPM= 10.62 Transcript Type= protein_coding
chr17	7856685	7857891	7856685	7857891	-	ENST00000575771.5@NAA38	ENST00000575771.5	protein_coding	7857383,7857015,7856685	7857891,7857198,7856843	Gene ID= ENSG00000183011.13 TPM= 43.02 Transcript Type= protein_coding
chr17	7856685	7857854	7856685	7857854	-	ENST00000333775.9@NAA38	ENST00000333775.9	protein_coding	7857015,7856685	7857854,7856843	Gene ID= ENSG00000183011.13 TPM= 54.7 Transcript Type= protein_coding
chr17	7856699	7857263	7856699	7857263	-	ENST00000576384.1@NAA38	ENST00000576384.1	protein_coding	7856985,7856699	7857263,7856843	Gene ID= ENSG00000183011.13 TPM= 6.37 Transcript Type= protein_coding
chr17	7856685	7857562	7856685	7857562	-	ENST00000575071.5@NAA38	ENST00000575071.5	protein_coding	7857383,7856985,7856685	7857562,7857198,7856843	Gene ID= ENSG00000183011.13 TPM= 6.37 Transcript Type= protein_coding
chr17	7857983	7862282	7857983	7862282	+	ENST00000332439.4@CYB5D1	ENST00000332439.4	protein_coding	7857983,7858403,7858606,7859382	7858294,7858479,7858824,7862282	Gene ID= ENSG00000182224.11 TPM= 4.25 Transcript Type= protein_coding
chr17	7884806	7912760	7884806	7912760	+	ENST00000380358.8@CHD3	ENST00000380358.8	protein_coding	7884806,7889664,7890571,7890940,7893286,7893805,7894115,7894415,7894917,7895339,7897083,7897971,7898496,7899011,7899343,7899896,7900290,7900558,7900852,7901244,7902610,7902937,7903272,7903825,7904442,7905100,7905621,7905856,7906553,7906869,7907126,7907353,7907601,7907894,7908402,7908697,7909143,7910428,7910847,7911464	7885083,7889776,7890741,7891064,7893569,7893935,7894265,7894608,7895150,7895542,7897294,7898102,7898595,7899202,7899543,7900033,7900411,7900731,7900993,7901375,7902727,7903061,7903503,7903991,7904619,7905165,7905706,7905989,7906697,7907031,7907247,7907488,7907702,7908019,7908510,7908829,7909338,7910591,7910973,7912760	Gene ID= ENSG00000170004.16 TPM= 4.25 Transcript Type= protein_coding
chr17	7913340	7915957	7913340	7915957	-	ENST00000635932.1@AC104581.1	ENST00000635932.1	protein_coding	7913340	7915957	Gene ID= ENSG00000179859.9 TPM= 1.06 Transcript Type= protein_coding
chr17	7930349	7931945	7930349	7931945	-	ENST00000303731.8@TRAPPC1	ENST00000303731.8	protein_coding	7931731,7931506,7931011,7930349	7931945,7931576,7931149,7930734	Gene ID= ENSG00000170043.11 TPM= 38.24 Transcript Type= protein_coding
chr17	7930345	7931999	7930345	7931999	-	ENST00000540486.5@TRAPPC1	ENST00000540486.5	protein_coding	7931940,7931731,7931506,7931011,7930345	7931999,7931829,7931576,7931149,7930734	Gene ID= ENSG00000170043.11 TPM= 18.06 Transcript Type= protein_coding
chr17	7932155	7949578	7932155	7949578	+	ENST00000563694.5@CNTROB	ENST00000563694.5	protein_coding	7932155,7934138,7934465,7934989,7936366,7936701,7937164,7939513,7940096,7943391,7944123,7944476,7945728,7947571,7947916,7948157,7948487,7949085,7949385	7933349,7934222,7934546,7935145,7936482,7936817,7937262,7939749,7940242,7943524,7944248,7944638,7945986,7947722,7947979,7948327,7948619,7949157,7949578	Gene ID= ENSG00000170037.13 TPM= 3.19 Transcript Type= protein_coding
chr17	8140472	8152435	8140472	8152435	-	ENST00000317276.8@PER1	ENST00000317276.8	protein_coding	8152337,8150432,8150219,8149971,8149755,8149462,8149259,8148644,8148181,8147997,8147674,8147470,8147250,8146897,8146594,8146372,8145958,8144751,8143266,8142649,8142269,8141805,8140472	8152435,8150845,8150317,8150125,8149876,8149663,8149310,8148786,8148259,8148103,8147827,8147578,8147381,8147002,8146765,8146502,8146137,8144993,8143876,8142835,8142458,8141955,8141340	Gene ID= ENSG00000179094.15 TPM= 43.55 Transcript Type= protein_coding
chr17	8145326	8146401	8145326	8146401	-	transcript1044.chr17.nnic@NA	transcript1044.chr17.nnic	NA	8145326	8146401	Gene ID= novel_gene_chr17_1045 TPM= 2.12 Transcript Type= NA
chr17	8151991	8153998	8151991	8153998	+	transcript1042.chr17.nnic@NA	transcript1042.chr17.nnic	NA	8151991	8153998	Gene ID= novel_gene_chr17_1043 TPM= 11.68 Transcript Type= NA
chr17	8153439	8156329	8153439	8156329	-	transcript1046.chr17.nnic@NA	transcript1046.chr17.nnic	NA	8153439	8156329	Gene ID= novel_gene_chr17_1047 TPM= 2.12 Transcript Type= NA
chr17	8159149	8162975	8159149	8162975	-	ENST00000316509.10@VAMP2	ENST00000316509.10	protein_coding	8162878,8162249,8161608,8161473,8159149	8162975,8162369,8161766,8161524,8160871	Gene ID= ENSG00000220205.8 TPM= 14.87 Transcript Type= protein_coding
chr17	8173967	8176374	8173967	8176374	-	ENST00000437139.6@TMEM107	ENST00000437139.6	protein_coding	8176200,8175959,8175757,8174520,8173967	8176374,8176026,8175857,8174616,8174272	Gene ID= ENSG00000179029.14 TPM= 5.31 Transcript Type= protein_coding
chr17	8173999	8176388	8173999	8176388	-	ENST00000533070.5@TMEM107	ENST00000533070.5	protein_coding	8176200,8175959,8175757,8174541,8173999	8176388,8176026,8175875,8174616,8174272	Gene ID= ENSG00000179029.14 TPM= 1.06 Transcript Type= protein_coding
chr17	8220642	8224043	8220642	8224043	-	ENST00000315707.3@LINC00324	ENST00000315707.3	lincRNA	8223812,8222293,8220642	8224043,8223274,8221509	Gene ID= ENSG00000178977.3 TPM= 1.06 Transcript Type= lincRNA
chr17	8224821	8248044	8224821	8248044	-	ENST00000315684.12@CTC1	ENST00000315684.12	protein_coding	8248004,8242985,8238392,8238031,8237375,8236058,8235831,8235053,8234749,8234455,8232906,8232361,8231903,8231726,8231276,8230563,8230294,8229891,8229302,8229142,8228727,8228503,8224821	8248044,8243148,8238629,8238242,8237519,8236342,8235959,8235285,8234926,8234655,8233032,8232475,8232227,8231815,8231469,8230651,8230468,8229968,8229446,8229206,8228892,8228629,8228319	Gene ID= ENSG00000178971.13 TPM= 3.19 Transcript Type= protein_coding
chr17	8249286	8270485	8249286	8270485	+	ENST00000314666.10@PFAS	ENST00000314666.10	protein_coding	8249286,8253859,8254166,8255027,8255502,8255805,8256267,8256524,8256835,8257807,8258071,8262920,8263109,8263575,8263775,8264212,8264470,8264895,8265288,8265556,8265862,8266234,8266753,8267028,8267372,8267551,8268533,8268954	8249339,8254079,8254301,8255132,8255691,8255910,8256407,8256648,8256963,8257938,8258199,8262993,8263265,8263636,8263936,8264337,8264601,8265125,8265468,8265639,8266017,8266353,8266898,8267235,8267463,8267665,8268856,8270485	Gene ID= ENSG00000178921.13 TPM= 5.31 Transcript Type= protein_coding
chr17	8290059	8295318	8290059	8295318	-	ENST00000577745.1@SLC25A35	ENST00000577745.1	protein_coding	8294433,8292523,8291333,8290842,8290059	8295318,8292588,8291485,8290976,8290678	Gene ID= ENSG00000125434.10 TPM= 2.12 Transcript Type= protein_coding
chr17	8288497	8290092	8288497	8290092	+	ENST00000226105.10@RANGRF	ENST00000226105.10	protein_coding	8288497,8288956,8289258,8289503,8289813	8288865,8289072,8289414,8289588,8290092	Gene ID= ENSG00000108961.13 TPM= 43.9 Transcript Type= protein_coding
chr17	8288678	8290092	8288678	8290092	+	ENST00000439238.3@RANGRF	ENST00000439238.3	protein_coding	8288678,8288956,8289258	8288865,8289072,8290092	Gene ID= ENSG00000108961.13 TPM= 2.66 Transcript Type= protein_coding
chr17	8288671	8290092	8288671	8290092	+	ENST00000580434.5@RANGRF	ENST00000580434.5	protein_coding	8288671,8288956,8289258,8289813	8288865,8289072,8289414,8290092	Gene ID= ENSG00000108961.13 TPM= 6.72 Transcript Type= protein_coding
chr17	8288654	8290090	8288654	8290090	+	ENST00000407006.8@RANGRF	ENST00000407006.8	protein_coding	8288654,8288956,8289258,8289503	8288865,8289072,8289414,8290090	Gene ID= ENSG00000108961.13 TPM= 5.13 Transcript Type= protein_coding
chr17	8368637	8376711	8368637	8376711	-	ENST00000396267.1@KRBA2	ENST00000396267.1	protein_coding	8375900,8368637	8376711,8370386	Gene ID= ENSG00000184619.3 TPM= 4.25 Transcript Type= protein_coding
chr17	8370198	8376727	8370198	8376727	-	transcript1091.chr17.nnic@AC135178.2	transcript1091.chr17.nnic	protein_coding	8375900,8371600,8371309,8370198	8376727,8372081,8371494,8370386	Gene ID= ENSG00000263809.1 TPM= 6.9 Transcript Type= NA
chr17	8368812	8376727	8368812	8376727	-	transcript1099.chr17.nic@AC135178.2	transcript1099.chr17.nic	protein_coding	8375900,8371309,8368812	8376727,8372081,8370386	Gene ID= ENSG00000263809.1 TPM= 4.78 Transcript Type= NA
chr17	8377521	8383167	8377521	8383167	-	ENST00000584164.5@RPL26	ENST00000584164.5	protein_coding	8382781,8382143,8379796,8377521	8383167,8382315,8379936,8377692	Gene ID= ENSG00000161970.12 TPM= 26.55 Transcript Type= protein_coding
chr17	8377520	8383193	8377520	8383193	-	ENST00000293842.9@RPL26	ENST00000293842.9	protein_coding	8383157,8382143,8379796,8377520	8383193,8382315,8379936,8377692	Gene ID= ENSG00000161970.12 TPM= 261.29 Transcript Type= protein_coding
chr17	8377549	8383166	8377549	8383166	-	ENST00000582556.5@RPL26	ENST00000582556.5	protein_coding	8382862,8382143,8379796,8377549	8383166,8382315,8379936,8377692	Gene ID= ENSG00000161970.12 TPM= 2.12 Transcript Type= protein_coding
chr17	8435922	8468153	8435922	8468153	+	transcript1108.chr17.nnic@NDEL1	transcript1108.chr17.nnic	protein_coding	8435922,8444260,8445711,8446754,8448550,8450780,8460009,8463320,8466930	8436045,8444357,8445864,8446902,8448686,8450953,8460160,8463354,8468153	Gene ID= ENSG00000166579.15 TPM= 14.87 Transcript Type= NA
chr17	8474296	8630725	8474296	8630725	-	transcript1112.chr17.nic@MYH10	transcript1112.chr17.nic	protein_coding	8630654,8623424,8622902,8604826,8589081,8577236,8569720,8553955,8552046,8548644,8548313,8546544,8545448,8542107,8535758,8535387,8521092,8520878,8518881,8518631,8513786,8513538,8512451,8509812,8508554,8506318,8504694,8500826,8499270,8495137,8493733,8492776,8492297,8490340,8487433,8484138,8481322,8480402,8480110,8478338,8476876,8474296	8630725,8623497,8623277,8604982,8589108,8577338,8569812,8554018,8552144,8548787,8548408,8546662,8545600,8542280,8535931,8535501,8521285,8520999,8518950,8518791,8513894,8513669,8512657,8509949,8508677,8506489,8504906,8500970,8499476,8495241,8493885,8493024,8492509,8490552,8487594,8484266,8481410,8480525,8480318,8478446,8477048,8475948	Gene ID= ENSG00000133026.12 TPM= 14.87 Transcript Type= NA
chr17	8512468	8630897	8512468	8630897	-	transcript1118.chr17.nic@MYH10	transcript1118.chr17.nic	protein_coding	8630654,8623424,8622902,8604826,8589081,8577236,8576643,8569720,8553955,8552046,8548644,8548313,8546544,8545448,8542107,8535758,8535387,8521092,8520878,8518881,8518631,8513786,8513538,8512468	8630897,8623497,8623277,8604982,8589108,8577338,8576672,8569812,8554018,8552144,8548787,8548408,8546662,8545600,8542280,8535931,8535501,8521285,8520999,8518950,8518791,8513894,8513669,8512657	Gene ID= ENSG00000133026.12 TPM= 2.39 Transcript Type= NA
chr17	8512468	8630747	8512468	8630747	-	transcript1119.chr17.nic@MYH10	transcript1119.chr17.nic	protein_coding	8630654,8622902,8604826,8589081,8577236,8576643,8569720,8553955,8552046,8548644,8548313,8546544,8545448,8542107,8535758,8535387,8521092,8520878,8518881,8518631,8513786,8513538,8512468	8630747,8623277,8604982,8589108,8577338,8576672,8569812,8554018,8552144,8548787,8548408,8546662,8545600,8542280,8535931,8535501,8521285,8520999,8518950,8518791,8513894,8513669,8512657	Gene ID= ENSG00000133026.12 TPM= 6.64 Transcript Type= NA
chr17	8802737	8867677	8802737	8867677	-	ENST00000619866.4@PIK3R6	ENST00000619866.4	protein_coding	8867529,8849782,8839614,8838564,8837803,8836791,8836547,8835273,8832889,8829706,8828567,8828112,8827172,8823387,8822996,8822587,8821846,8819083,8804041,8802737	8867677,8849885,8839697,8838655,8837871,8836923,8836616,8835456,8833045,8829792,8828990,8828190,8827294,8823497,8823086,8822657,8821936,8819198,8804153,8803429	Gene ID= ENSG00000276231.4 TPM= 3.19 Transcript Type= protein_coding
chr17	9250471	9576236	9250471	9576236	-	ENST00000306357.8@STX8	ENST00000306357.8	protein_coding	9575792,9568371,9557434,9545172,9505038,9491829,9378552,9250471	9576236,9568470,9557528,9545282,9505162,9491921,9378653,9250645	Gene ID= ENSG00000170310.14 TPM= 43.55 Transcript Type= protein_coding
chr17	9915255	10036747	9915255	10036747	-	ENST00000585266.5@GAS7	ENST00000585266.5	protein_coding	10036434,10019777,9981804,9969677,9959202,9946894,9943121,9940126,9934166,9926641,9925476,9919626,9918001,9915255	10036747,10019897,9981884,9969762,9959255,9946983,9943236,9940200,9934244,9926769,9925599,9919705,9918099,9917341	Gene ID= ENSG00000007237.18 TPM= 1.06 Transcript Type= protein_coding
chr17	9913850	10198551	9913850	10198551	-	ENST00000432992.6@GAS7	ENST00000432992.6	protein_coding	10198208,10019777,9981804,9969677,9959202,9946894,9943121,9940126,9934166,9926641,9925476,9919626,9918001,9913850	10198551,10019897,9981884,9969762,9959255,9946983,9943236,9940200,9934244,9926769,9925599,9919705,9918099,9917341	Gene ID= ENSG00000007237.18 TPM= 11.68 Transcript Type= protein_coding
chr17	9910944	9914470	9910944	9914470	-	transcript1147.chr17.nnic@NA	transcript1147.chr17.nnic	NA	9910944	9914470	Gene ID= novel_gene_chr17_1148 TPM= 6.37 Transcript Type= NA
chr17	10672474	10697568	10672474	10697568	-	ENST00000255390.9@SCO1	ENST00000255390.9	protein_coding	10697235,10695741,10692764,10691872,10686727,10672474	10697568,10695831,10692961,10691964,10686842,10681253	Gene ID= ENSG00000133028.10 TPM= 4.25 Transcript Type= protein_coding
chr17	10697594	10711233	10697594	10711233	+	ENST00000379774.4@ADPRM	ENST00000379774.4	protein_coding	10697594,10704910,10706438,10710834	10697667,10705527,10706554,10711233	Gene ID= ENSG00000170222.11 TPM= 1.06 Transcript Type= protein_coding
chr17	10697614	10711233	10697614	10711233	+	ENST00000468843.1@ADPRM	ENST00000468843.1	protein_coding	10697614,10704910,10706438,10710834	10697667,10705615,10706554,10711233	Gene ID= ENSG00000170222.11 TPM= 1.06 Transcript Type= nonsense_mediated_decay
chr17	10713295	10730316	10713295	10730316	-	ENST00000341871.7@TMEM220	ENST00000341871.7	protein_coding	10729780,10729031,10726204,10725011,10723270,10713295	10730316,10729060,10726264,10725134,10723329,10715588	Gene ID= ENSG00000187824.8 TPM= 1.06 Transcript Type= protein_coding
chr17	10714676	10730023	10714676	10730023	-	ENST00000455996.6@TMEM220	ENST00000455996.6	protein_coding	10729780,10726204,10725011,10723270,10714676	10730023,10726264,10725134,10723329,10715588	Gene ID= ENSG00000187824.8 TPM= 3.19 Transcript Type= protein_coding
chr17	11977439	11997438	11977439	11997438	-	transcript1159.chr17.nnic@ZNF18	transcript1159.chr17.nnic	protein_coding	11996810,11993502,11992443,11990974,11990462,11984113,11983297,11977439	11997438,11993654,11992911,11991163,11990550,11984197,11983404,11978744	Gene ID= ENSG00000154957.13 TPM= 2.12 Transcript Type= NA
chr17	11977439	11997510	11977439	11997510	-	ENST00000580306.6@ZNF18	ENST00000580306.6	protein_coding	11997431,11992443,11990974,11990462,11984113,11983297,11977439	11997510,11992911,11991163,11990550,11984197,11983407,11978744	Gene ID= ENSG00000154957.13 TPM= 4.78 Transcript Type= protein_coding
chr17	11977439	11995699	11977439	11995699	-	transcript1161.chr17.nic@ZNF18	transcript1161.chr17.nic	protein_coding	11995558,11992443,11990974,11990462,11984113,11983297,11977439	11995699,11992911,11991163,11990550,11984197,11983407,11978744	Gene ID= ENSG00000154957.13 TPM= 3.72 Transcript Type= NA
chr17	11977452	11997457	11977452	11997457	-	ENST00000454073.7@ZNF18	ENST00000454073.7	protein_coding	11997431,11992443,11990974,11990462,11984113,11983297,11977452	11997457,11992911,11991163,11990550,11984197,11983404,11978744	Gene ID= ENSG00000154957.13 TPM= 3.19 Transcript Type= protein_coding
chr17	12020824	12143823	12020824	12143823	+	ENST00000353533.9@MAP2K4	ENST00000353533.9	protein_coding	12020824,12054889,12081356,12095575,12107790,12110375,12113233,12125294,12129139,12139839,12141147	12021001,12054991,12081530,12095694,12107909,12110426,12113360,12125371,12129287,12139884,12143823	Gene ID= ENSG00000065559.14 TPM= 7.44 Transcript Type= protein_coding
chr17	12665894	12725006	12665894	12725006	+	transcript1177.chr17.nic@MYOCD	transcript1177.chr17.nic	protein_coding	12665894,12705128,12710495,12715519,12717346,12722847	12666243,12705193,12710538,12715574,12717421,12725006	Gene ID= ENSG00000141052.17 TPM= 2.12 Transcript Type= NA
chr17	12789540	12991642	12789540	12991642	+	ENST00000580768.5@ARHGAP44	ENST00000580768.5	protein_coding	12789540,12894940,12896407,12908897,12915900,12919755,12941056,12943588,12944069,12949140,12949649,12952501,12955867,12956655,12958717,12974089,12980058,12984531,12987101,12990032	12789891,12894979,12896511,12908973,12916011,12919831,12941124,12943669,12944196,12949251,12949730,12952581,12955980,12956746,12958897,12974310,12980233,12984908,12987152,12991642	Gene ID= ENSG00000006740.16 TPM= 3.19 Transcript Type= nonsense_mediated_decay
chr17	12992391	13018187	12992391	13018187	-	ENST00000338034.8@ELAC2	ENST00000338034.8	protein_coding	13017703,13017071,13016862,13015768,13014439,13013207,13011663,13010613,13005921,13005753,13004989,13003479,13002441,13002274,13000156,12998412,12996547,12995940,12995703,12994963,12994764,12994425,12993687,12992391	13018187,13017121,13016932,13015832,13014496,13013275,13011782,13010671,13005979,13005825,13005101,13003574,13002579,13002359,13000274,12998508,12996685,12995978,12995812,12995062,12994884,12994503,12993831,12993045	Gene ID= ENSG00000006744.18 TPM= 131.18 Transcript Type= protein_coding
chr17	14069496	14208666	14069496	14208666	+	transcript1216.chr17.nnic@COX10	transcript1216.chr17.nnic	protein_coding	14069496,14074323,14076735,14102118,14159877,14206810	14069648,14074456,14077056,14102242,14159947,14208666	Gene ID= ENSG00000006695.10 TPM= 2.12 Transcript Type= NA
chr17	14069496	14077322	14069496	14077322	+	ENST00000429152.6@COX10	ENST00000429152.6	protein_coding	14069496,14074323,14076735	14069648,14074456,14077322	Gene ID= ENSG00000006695.10 TPM= 3.19 Transcript Type= protein_coding
chr17	14069529	14208677	14069529	14208677	+	ENST00000261643.7@COX10	ENST00000261643.7	protein_coding	14069529,14074323,14076735,14102118,14159877,14191989,14206810	14069648,14074456,14077056,14102242,14159947,14192221,14208677	Gene ID= ENSG00000006695.10 TPM= 104.09 Transcript Type= protein_coding
chr17	14162624	14165041	14162624	14165041	-	transcript1219.chr17.nnic@NA	transcript1219.chr17.nnic	NA	14162624	14165041	Gene ID= novel_gene_chr17_1220 TPM= 3.19 Transcript Type= NA
chr17	14202225	14204470	14202225	14204470	-	transcript1221.chr17.nnic@NA	transcript1221.chr17.nnic	NA	14202225	14204470	Gene ID= novel_gene_chr17_1222 TPM= 6.37 Transcript Type= NA
chr17	15229778	15260821	15229778	15260821	-	transcript1226.chr17.nic@PMP22	transcript1226.chr17.nic	protein_coding	15260650,15259094,15239471,15229778	15260821,15259193,15239611,15231080	Gene ID= ENSG00000109099.13 TPM= 28.68 Transcript Type= NA
chr17	15229778	15265307	15229778	15265307	-	ENST00000312280.7@PMP22	ENST00000312280.7	protein_coding	15265154,15260650,15259094,15239471,15229778	15265307,15260761,15259193,15239611,15231080	Gene ID= ENSG00000109099.13 TPM= 29.74 Transcript Type= protein_coding
chr17	15229778	15262589	15229778	15262589	-	ENST00000395938.6@PMP22	ENST00000395938.6	protein_coding	15262429,15260650,15259094,15239471,15229778	15262589,15260761,15259193,15239611,15231080	Gene ID= ENSG00000109099.13 TPM= 103.03 Transcript Type= protein_coding
chr17	15436021	15563561	15436021	15563561	-	ENST00000522212.6@TVP23C-CDRT4	ENST00000522212.6	protein_coding	15563437,15555282,15553685,15547059,15545785,15440208,15436021	15563561,15555364,15553829,15547148,15545916,15440285,15438200	Gene ID= ENSG00000259024.6 TPM= 4.25 Transcript Type= protein_coding
chr17	15502264	15563544	15502264	15563544	-	ENST00000225576.7@TVP23C	ENST00000225576.7	protein_coding	15563437,15555282,15553685,15547059,15545785,15502264	15563544,15555364,15553829,15547148,15545916,15503232	Gene ID= ENSG00000175106.16 TPM= 2.12 Transcript Type= protein_coding
chr17	15627967	15651861	15627967	15651861	-	transcript1240.chr17.nic@AC005324.3	transcript1240.chr17.nic	protein_coding	15651091,15642721,15636036,15632509,15631619,15627967	15651861,15642816,15636269,15632674,15631714,15629198	Gene ID= ENSG00000251537.4 TPM= 24.43 Transcript Type= NA
chr17	15627960	15642964	15627960	15642964	-	ENST00000577886.5@TRIM16	ENST00000577886.5	protein_coding	15642721,15636036,15632509,15631619,15627960	15642964,15636269,15632674,15631714,15629198	Gene ID= ENSG00000221926.11 TPM= 15.93 Transcript Type= protein_coding
chr17	15683209	15684311	15683209	15684311	-	transcript1243.chr17.nnic@NA	transcript1243.chr17.nnic	NA	15683209	15684311	Gene ID= novel_gene_chr17_1244 TPM= 2.12 Transcript Type= NA
chr17	15786512	15789703	15786512	15789703	+	transcript1251.chr17.nnic@NA	transcript1251.chr17.nnic	NA	15786512	15789703	Gene ID= novel_gene_chr17_1252 TPM= 5.31 Transcript Type= NA
chr17	15944917	15975746	15944917	15975746	+	ENST00000304222.2@ADORA2B	ENST00000304222.2	protein_coding	15944917,15974679	15945583,15975746	Gene ID= ENSG00000170425.3 TPM= 1.06 Transcript Type= protein_coding
chr17	15976560	15999713	15976560	15999713	-	transcript1260.chr17.nic@ZSWIM7	transcript1260.chr17.nic	protein_coding	15999519,15993757,15987266,15981040,15978044,15977800,15977579,15976560	15999713,15993778,15987368,15981144,15978163,15977913,15977700,15977092	Gene ID= ENSG00000214941.7 TPM= 2.12 Transcript Type= NA
chr17	15976560	15999692	15976560	15999692	-	ENST00000399277.5@ZSWIM7	ENST00000399277.5	protein_coding	15999519,15993757,15987266,15981040,15976560	15999692,15993778,15987368,15981144,15978163	Gene ID= ENSG00000214941.7 TPM= 6.37 Transcript Type= protein_coding
chr17	15976560	15999650	15976560	15999650	-	ENST00000490395.5@ZSWIM7	ENST00000490395.5	protein_coding	15999506,15993757,15987266,15981040,15978044,15977800,15977579,15976560	15999650,15993778,15987368,15981144,15978163,15977913,15977700,15977092	Gene ID= ENSG00000214941.7 TPM= 2.12 Transcript Type= nonsense_mediated_decay
chr17	15977727	15999717	15977727	15999717	-	ENST00000491631.5@ZSWIM7	ENST00000491631.5	protein_coding	15999506,15993757,15987266,15981040,15977727	15999717,15993778,15987368,15981144,15978163	Gene ID= ENSG00000214941.7 TPM= 13.81 Transcript Type= nonsense_mediated_decay
chr17	15977727	15999684	15977727	15999684	-	ENST00000472495.5@ZSWIM7	ENST00000472495.5	protein_coding	15999519,15993757,15987266,15981040,15978044,15977727	15999684,15993778,15987368,15981144,15978163,15977913	Gene ID= ENSG00000214941.7 TPM= 8.5 Transcript Type= protein_coding
chr17	15999380	16028912	15999380	16028912	+	ENST00000261647.9@TTC19	ENST00000261647.9	protein_coding	15999380,16000118,16001915,16002793,16003831,16004201,16006474,16025017,16026540,16027374	16000032,16000245,16002025,16002831,16003887,16004262,16006568,16025171,16026702,16028912	Gene ID= ENSG00000011295.15 TPM= 2.12 Transcript Type= protein_coding
chr17	15999802	16028786	15999802	16028786	+	ENST00000475723.5@TTC19	ENST00000475723.5	protein_coding	15999802,16000118,16001915,16002793,16003831,16004201,16006474,16025017,16026540,16027374	16000032,16000382,16002025,16002831,16003887,16004262,16006568,16025171,16026702,16028786	Gene ID= ENSG00000011295.15 TPM= 1.06 Transcript Type= nonsense_mediated_decay
chr17	16029157	16215549	16029157	16215549	-	ENST00000268712.7@NCOR1	ENST00000268712.7	protein_coding	16215362,16194462,16186554,16171803,16164979,16158760,16153339,16151946,16149451,16146376,16143606,16139008,16138158,16137311,16126082,16121052,16119423,16117888,16108786,16101250,16098367,16091863,16086282,16080607,16080408,16079964,16075534,16073429,16072145,16071409,16070165,16067894,16065485,16064870,16064068,16062105,16061401,16058471,16057907,16057514,16048845,16046951,16040441,16039433,16034765,16029157	16215549,16194639,16186687,16171995,16165161,16158873,16153395,16151998,16149517,16146548,16143696,16139186,16138212,16137412,16126206,16121269,16119485,16118027,16108912,16101757,16098496,16092058,16086442,16080727,16080509,16080064,16075702,16073569,16072228,16071665,16070525,16068121,16065694,16065019,16064187,16062270,16061894,16058599,16058064,16057737,16048988,16047093,16040494,16039654,16034944,16032483	Gene ID= ENSG00000141027.20 TPM= 4.25 Transcript Type= protein_coding
chr17	16126132	16215566	16126132	16215566	-	transcript1281.chr17.nnic@NCOR1	transcript1281.chr17.nnic	protein_coding	16215362,16198098,16194462,16186554,16171803,16164979,16158760,16153339,16151946,16151590,16149451,16146376,16143606,16139008,16138158,16137311,16126132	16215566,16198719,16194639,16186687,16171995,16165161,16158873,16153395,16151998,16151616,16149517,16146548,16143696,16139186,16138212,16137412,16126206	Gene ID= ENSG00000141027.20 TPM= 4.54 Transcript Type= NA
chr17	16126132	16215565	16126132	16215565	-	transcript1285.chr17.nic@NCOR1	transcript1285.chr17.nic	protein_coding	16215362,16194462,16186554,16171803,16164979,16158760,16153339,16151946,16151590,16149451,16146376,16143606,16139008,16138158,16137311,16126132	16215565,16194639,16186687,16171995,16165161,16158873,16153395,16151998,16151616,16149517,16146548,16143696,16139186,16138212,16137412,16126206	Gene ID= ENSG00000141027.20 TPM= 12.32 Transcript Type= NA
chr17	16126082	16215537	16126082	16215537	-	ENST00000411510.5@NCOR1	ENST00000411510.5	protein_coding	16215362,16194462,16186554,16171803,16164979,16158760,16153339,16151946,16149451,16146376,16143606,16139008,16138158,16137311,16126082	16215537,16194639,16186687,16171995,16165161,16158873,16153395,16151998,16149517,16146548,16143696,16139186,16138212,16137412,16126209	Gene ID= ENSG00000141027.20 TPM= 16.04 Transcript Type= protein_coding
chr17	16126132	16215530	16126132	16215530	-	ENST00000436828.5@NCOR1	ENST00000436828.5	protein_coding	16215362,16198601,16194462,16186554,16171803,16164979,16158760,16153339,16151946,16151590,16149451,16146376,16143606,16139008,16138158,16137311,16126132	16215530,16198719,16194639,16186687,16171995,16165161,16158873,16153395,16151998,16151616,16149517,16146548,16143696,16139186,16138212,16137412,16126206	Gene ID= ENSG00000141027.20 TPM= 27.9 Transcript Type= protein_coding
chr17	16126107	16215529	16126107	16215529	-	ENST00000582357.5@NCOR1	ENST00000582357.5	protein_coding	16215362,16194462,16186554,16171803,16164979,16158760,16153339,16151946,16151590,16149451,16146376,16143606,16139008,16138158,16137311,16126107	16215529,16194639,16186687,16171995,16165161,16158873,16153395,16151998,16151616,16149517,16146548,16143696,16139186,16138212,16137412,16126209	Gene ID= ENSG00000141027.20 TPM= 33.03 Transcript Type= protein_coding
chr17	16126132	16215530	16126132	16215530	-	ENST00000460276.5@NCOR1	ENST00000460276.5	protein_coding	16215362,16194462,16186554,16171803,16164979,16158760,16153339,16151946,16149451,16146376,16143606,16139008,16138158,16137311,16126132	16215530,16194639,16186687,16172020,16165161,16158873,16153395,16151998,16149517,16146548,16143696,16139186,16138212,16137412,16126206	Gene ID= ENSG00000141027.20 TPM= 8.78 Transcript Type= nonsense_mediated_decay
chr17	16164871	16215548	16164871	16215548	-	ENST00000585296.1@NCOR1	ENST00000585296.1	protein_coding	16215362,16194462,16186554,16171803,16164871	16215548,16194639,16186687,16171995,16165161	Gene ID= ENSG00000141027.20 TPM= 2.12 Transcript Type= retained_intron
chr17	16215658	16218214	16215658	16218214	+	transcript1303.chr17.nnic@NA	transcript1303.chr17.nnic	NA	16215658	16218214	Gene ID= novel_gene_chr17_1304 TPM= 4.25 Transcript Type= NA
chr17	16217246	16218219	16217246	16218219	+	ENST00000463810.2@PIGL	ENST00000463810.2	protein_coding	16217246,16217548	16217461,16218219	Gene ID= ENSG00000108474.16 TPM= 1.06 Transcript Type= protein_coding
chr17	16302875	16304603	16302875	16304603	+	transcript1305.chr17.nnic@NA	transcript1305.chr17.nnic	NA	16302875	16304603	Gene ID= novel_gene_chr17_1306 TPM= 2.12 Transcript Type= NA
chr17	16342534	16353499	16342534	16353499	-	ENST00000299736.4@CENPV	ENST00000299736.4	protein_coding	16353027,16349931,16348616,16344597,16342534	16353499,16350029,16348685,16344711,16342941	Gene ID= ENSG00000166582.9 TPM= 4.25 Transcript Type= protein_coding
chr17	16380799	16382740	16380799	16382740	+	ENST00000302182.7@UBB	ENST00000302182.7	protein_coding	16380799,16381902	16381184,16382740	Gene ID= ENSG00000170315.13 TPM= 528.42 Transcript Type= protein_coding
chr17	16381290	16382740	16381290	16382740	+	ENST00000395839.5@UBB	ENST00000395839.5	protein_coding	16381290,16381902	16381462,16382740	Gene ID= ENSG00000170315.13 TPM= 30.27 Transcript Type= protein_coding
chr17	16415542	16437003	16415542	16437003	+	ENST00000338560.11@TRPV2	ENST00000338560.11	protein_coding	16415542,16417562,16420115,16422599,16423469,16426099,16426722,16427449,16428317,16428817,16431784,16431966,16433574,16434890,16436789	16415833,16417868,16420248,16422889,16423767,16426269,16426877,16427547,16428387,16428982,16431850,16432300,16433698,16434969,16437003	Gene ID= ENSG00000187688.14 TPM= 7.44 Transcript Type= protein_coding
chr17	16439002	16442012	16439002	16442012	+	transcript1324.chr17.nic@LRRC75A-AS1	transcript1324.chr17.nic	processed_transcript	16439002,16439327,16439528,16440185,16441074,16441368	16439060,16439414,16439703,16440253,16441130,16442012	Gene ID= ENSG00000175061.17 TPM= 10.2 Transcript Type= NA
chr17	16439002	16442012	16439002	16442012	+	transcript1326.chr17.nic@LRRC75A-AS1	transcript1326.chr17.nic	processed_transcript	16439002,16439327,16439581,16440185,16441074,16441368	16439060,16439414,16439703,16440253,16441130,16442012	Gene ID= ENSG00000175061.17 TPM= 5.95 Transcript Type= NA
chr17	16438987	16442028	16438987	16442028	+	ENST00000481898.5@LRRC75A-AS1	ENST00000481898.5	processed_transcript	16438987,16439327,16439660,16440185,16441074,16441368	16439060,16439414,16439703,16440253,16441130,16442028	Gene ID= ENSG00000175061.17 TPM= 3.82 Transcript Type= antisense_RNA
chr17	16439020	16442012	16439020	16442012	+	ENST00000582911.5@LRRC75A-AS1	ENST00000582911.5	processed_transcript	16439020,16439327,16440185,16441074,16441368	16439060,16439393,16440253,16441130,16442012	Gene ID= ENSG00000175061.17 TPM= 61.18 Transcript Type= antisense_RNA
chr17	16439045	16442028	16439045	16442028	+	ENST00000475953.5@LRRC75A-AS1	ENST00000475953.5	processed_transcript	16439045,16439660,16440185,16441074,16441368	16439414,16439703,16440253,16441130,16442028	Gene ID= ENSG00000175061.17 TPM= 3.82 Transcript Type= antisense_RNA
chr17	16439011	16441995	16439011	16441995	+	ENST00000497774.5@LRRC75A-AS1	ENST00000497774.5	processed_transcript	16439011,16439327,16441074,16441368	16439060,16440253,16441130,16441995	Gene ID= ENSG00000175061.17 TPM= 2.12 Transcript Type= retained_intron
chr17	16441578	16444791	16441578	16444791	-	transcript1333.chr17.nnic@NA	transcript1333.chr17.nnic	NA	16441578	16444791	Gene ID= novel_gene_chr17_1334 TPM= 3.19 Transcript Type= NA
chr17	16553110	16569217	16553110	16569217	-	transcript1339.chr17.nic@ZNF287	transcript1339.chr17.nic	protein_coding	16567329,16566525,16563699,16563146,16553110	16569217,16566622,16563825,16563232,16553426	Gene ID= ENSG00000141040.14 TPM= 3.19 Transcript Type= NA
chr17	17042431	17185560	17042431	17185560	+	transcript1345.chr17.nic@MPRIP	transcript1345.chr17.nic	protein_coding	17042431,17075710,17078011,17126702,17131617,17136219,17137916,17142627,17143556,17146036,17147319,17150144,17154306,17158432,17161240,17171718,17172698,17173916,17176426,17177250,17180003,17180607,17184823	17042971,17075787,17078076,17126853,17131701,17136450,17138075,17142765,17143669,17146092,17147387,17150233,17154415,17159002,17161356,17171865,17172815,17174075,17176512,17177412,17180088,17180669,17185560	Gene ID= ENSG00000133030.20 TPM= 48.55 Transcript Type= NA
chr17	17042431	17185560	17042431	17185560	+	transcript1347.chr17.nic@MPRIP	transcript1347.chr17.nic	protein_coding	17042431,17075710,17078011,17126702,17131617,17136219,17137916,17142627,17146036,17147319,17150144,17154306,17158432,17161240,17171718,17172698,17173916,17175293,17176426,17177250,17180003,17180607,17184823	17042971,17075787,17078076,17126853,17131701,17136450,17138075,17142765,17146092,17147387,17150233,17154415,17159002,17161356,17171865,17172815,17174075,17175412,17176512,17177412,17180088,17180669,17185560	Gene ID= ENSG00000133030.20 TPM= 43.95 Transcript Type= NA
chr17	17042431	17185560	17042431	17185560	+	transcript1352.chr17.nic@MPRIP	transcript1352.chr17.nic	protein_coding	17042431,17075710,17078011,17126702,17131617,17136219,17137916,17142627,17146036,17147319,17150144,17154306,17158432,17161240,17171718,17172698,17173916,17176426,17177250,17180003,17180607,17184823	17042971,17075787,17078076,17126853,17131701,17136450,17138075,17142765,17146092,17147387,17150233,17154415,17159002,17161356,17171865,17172815,17174075,17176512,17177412,17180088,17180669,17185560	Gene ID= ENSG00000133030.20 TPM= 31.21 Transcript Type= NA
chr17	17042849	17185560	17042849	17185560	+	ENST00000341712.8@MPRIP	ENST00000341712.8	protein_coding	17042849,17075710,17078011,17126702,17131617,17136219,17137916,17142627,17143556,17146036,17147319,17150144,17154306,17158432,17161240,17171718,17172698,17173916,17175293,17176426,17177250,17180003,17180607,17184823	17042971,17075787,17078076,17126853,17131701,17136450,17138075,17142765,17143669,17146092,17147387,17150233,17154415,17159002,17161356,17171865,17172815,17174075,17175412,17176512,17177412,17180088,17180669,17185560	Gene ID= ENSG00000133030.20 TPM= 295.33 Transcript Type= protein_coding
chr17	17185753	17188792	17185753	17188792	-	transcript1367.chr17.nnic@NA	transcript1367.chr17.nnic	NA	17185753	17188792	Gene ID= novel_gene_chr17_1368 TPM= 6.37 Transcript Type= NA
chr17	17200995	17206315	17200995	17206315	-	ENST00000321560.3@PLD6	ENST00000321560.3	protein_coding	17205860,17200995	17206315,17203098	Gene ID= ENSG00000179598.5 TPM= 8.5 Transcript Type= protein_coding
chr17	17212212	17237139	17212212	17237139	-	ENST00000285071.8@FLCN	ENST00000285071.8	protein_coding	17236912,17232788,17231794,17227889,17226176,17223922,17222501,17221537,17219019,17217069,17216380,17215185,17214985,17212212	17237139,17232901,17231882,17228161,17226322,17224143,17222661,17221628,17219209,17217182,17216503,17215316,17215090,17213856	Gene ID= ENSG00000154803.12 TPM= 25.49 Transcript Type= protein_coding
chr17	17221171	17237139	17221171	17237139	-	ENST00000389169.9@FLCN	ENST00000389169.9	protein_coding	17236912,17232788,17231794,17227889,17226176,17223922,17222501,17221171	17237139,17232901,17231882,17228161,17226322,17224143,17222661,17221628	Gene ID= ENSG00000154803.12 TPM= 6.37 Transcript Type= protein_coding
chr17	17218388	17220033	17218388	17220033	-	transcript1388.chr17.nnic@NA	transcript1388.chr17.nnic	NA	17218388	17220033	Gene ID= novel_gene_chr17_1389 TPM= 2.12 Transcript Type= NA
chr17	17229539	17230538	17229539	17230538	+	transcript1386.chr17.nnic@NA	transcript1386.chr17.nnic	NA	17229539	17230538	Gene ID= novel_gene_chr17_1387 TPM= 2.12 Transcript Type= NA
chr17	17246836	17281293	17246836	17281293	-	ENST00000268717.9@COPS3	ENST00000268717.9	protein_coding	17281132,17276035,17270896,17270758,17267885,17264802,17261966,17260301,17254859,17248926,17247480,17246836	17281293,17276164,17271008,17270807,17267977,17264981,17262106,17260474,17254945,17249039,17247560,17247151	Gene ID= ENSG00000141030.12 TPM= 83.11 Transcript Type= protein_coding
chr17	17246835	17281246	17246835	17281246	-	transcript1393.chr17.nic@COPS3	transcript1393.chr17.nic	protein_coding	17281132,17276035,17270896,17270758,17267885,17264802,17261966,17260301,17254859,17248926,17247480,17246835	17281246,17276164,17271008,17270807,17268045,17264981,17262106,17260474,17254945,17249039,17247560,17247151	Gene ID= ENSG00000141030.12 TPM= 5.05 Transcript Type= NA
chr17	17246837	17281191	17246837	17281191	-	ENST00000578317.5@COPS3	ENST00000578317.5	protein_coding	17281132,17276035,17270896,17270758,17267885,17264802,17261966,17260301,17254859,17248926,17247480,17246837	17281191,17276183,17271008,17270807,17268045,17264981,17262106,17260474,17254945,17249039,17247560,17247151	Gene ID= ENSG00000141030.12 TPM= 3.45 Transcript Type= nonsense_mediated_decay
chr17	17280885	17281864	17280885	17281864	+	transcript1402.chr17.nnic@NA	transcript1402.chr17.nnic	NA	17280885	17281864	Gene ID= novel_gene_chr17_1403 TPM= 3.19 Transcript Type= NA
chr17	17303320	17347661	17303320	17347661	+	transcript1406.chr17.nnic@NT5M	transcript1406.chr17.nnic	protein_coding	17303320,17306543,17323185,17333496,17344794,17346805	17303817,17306643,17323245,17333588,17344908,17347661	Gene ID= ENSG00000205309.13 TPM= 2.34 Transcript Type= NA
chr17	17303350	17347661	17303350	17347661	+	transcript1410.chr17.nic@NT5M	transcript1410.chr17.nic	protein_coding	17303350,17306543,17323185,17344794,17346805	17303901,17306643,17323245,17344908,17347661	Gene ID= ENSG00000205309.13 TPM= 2.34 Transcript Type= NA
chr17	17303335	17347661	17303335	17347661	+	ENST00000616989.1@NT5M	ENST00000616989.1	protein_coding	17303335,17306543,17323185,17344794,17346805	17303817,17306643,17323245,17344926,17347661	Gene ID= ENSG00000205309.13 TPM= 3.4 Transcript Type= protein_coding
chr17	17303335	17347661	17303335	17347661	+	ENST00000389022.8@NT5M	ENST00000389022.8	protein_coding	17303335,17306543,17323185,17344794,17346805	17303817,17306643,17323245,17344908,17347661	Gene ID= ENSG00000205309.13 TPM= 21.46 Transcript Type= protein_coding
chr17	17476986	17493226	17476986	17493226	+	ENST00000268711.3@MED9	ENST00000268711.3	protein_coding	17476986,17491279	17477265,17493226	Gene ID= ENSG00000141026.5 TPM= 80.72 Transcript Type= protein_coding
chr17	17494437	17496393	17494437	17496393	-	ENST00000225688.3@RASD1	ENST00000225688.3	protein_coding	17495896,17494437	17496393,17495684	Gene ID= ENSG00000108551.4 TPM= 9.56 Transcript Type= protein_coding
chr17	17495220	17499217	17495220	17499217	+	transcript1416.chr17.nnic@NA	transcript1416.chr17.nnic	NA	17495220	17499217	Gene ID= novel_gene_chr17_1417 TPM= 2.12 Transcript Type= NA
chr17	17505563	17591700	17505563	17591700	-	ENST00000255389.9@PEMT	ENST00000255389.9	protein_coding	17591531,17576920,17522280,17512509,17509434,17506227,17505563	17591700,17577027,17522395,17512654,17509545,17506301,17505848	Gene ID= ENSG00000133027.17 TPM= 31.86 Transcript Type= protein_coding
chr17	17591923	17592385	17591923	17592385	+	transcript1423.chr17.nnic@NA	transcript1423.chr17.nnic	NA	17591923	17592385	Gene ID= novel_gene_chr17_1424 TPM= 2.12 Transcript Type= NA
chr17	17803061	17805092	17803061	17805092	-	transcript1426.chr17.nnic@NA	transcript1426.chr17.nnic	NA	17803061	17805092	Gene ID= novel_gene_chr17_1427 TPM= 2.12 Transcript Type= NA
chr17	17812073	17837002	17812073	17837002	-	ENST00000261646.9@SREBF1	ENST00000261646.9	protein_coding	17836727,17820090,17819538,17819320,17819013,17818260,17817696,17817256,17816958,17816457,17816207,17815860,17815221,17814835,17814615,17814245,17813569,17813368,17812073	17837002,17820521,17819725,17819454,17819234,17818374,17817916,17817457,17817136,17816718,17816373,17816028,17815329,17814944,17814747,17814410,17813769,17813479,17812851	Gene ID= ENSG00000072310.16 TPM= 12.21 Transcript Type= protein_coding
chr17	17812073	17815519	17812073	17815519	-	transcript1430.chr17.nic@SREBF1	transcript1430.chr17.nic	protein_coding	17815221,17814835,17814615,17814245,17813569,17813368,17812073	17815519,17814944,17814747,17814410,17813769,17813479,17812851	Gene ID= ENSG00000072310.16 TPM= 4.78 Transcript Type= NA
chr17	17843511	17972436	17843511	17972436	-	transcript1436.chr17.nic@TOM1L2	transcript1436.chr17.nic	protein_coding	17972262,17907447,17898596,17893661,17884634,17882705,17879627,17869340,17866876,17866296,17862731,17861476,17857769,17850893,17848823,17843511	17972436,17907531,17898674,17893810,17884768,17882863,17879743,17869473,17866924,17866419,17862848,17861551,17857855,17850952,17848859,17847783	Gene ID= ENSG00000175662.17 TPM= 372.47 Transcript Type= NA
chr17	17846849	17972436	17846849	17972436	-	transcript1442.chr17.nic@TOM1L2	transcript1442.chr17.nic	protein_coding	17972262,17907447,17898596,17893661,17879627,17869340,17866876,17866296,17862731,17861476,17857769,17850893,17848823,17846849	17972436,17907531,17898674,17893810,17879743,17869473,17866924,17866419,17862848,17861551,17857855,17850952,17848859,17847783	Gene ID= ENSG00000175662.17 TPM= 4.43 Transcript Type= NA
chr17	17858227	17972436	17858227	17972436	-	transcript1444.chr17.nic@TOM1L2	transcript1444.chr17.nic	protein_coding	17972262,17907447,17898596,17893661,17884634,17882705,17879627,17869340,17866876,17866296,17862731,17858227	17972436,17907531,17898674,17893810,17884768,17882863,17879743,17869473,17866924,17866419,17862848,17861551	Gene ID= ENSG00000175662.17 TPM= 23.37 Transcript Type= NA
chr17	17868893	17972436	17868893	17972436	-	transcript1447.chr17.nic@TOM1L2	transcript1447.chr17.nic	protein_coding	17972262,17907447,17898596,17893661,17884634,17882705,17879627,17868893	17972436,17907531,17898674,17893810,17884768,17882863,17879743,17869473	Gene ID= ENSG00000175662.17 TPM= 4.25 Transcript Type= NA
chr17	17876240	17877890	17876240	17877890	+	transcript1448.chr17.nnic@NA	transcript1448.chr17.nnic	NA	17876240	17877890	Gene ID= novel_gene_chr17_1449 TPM= 5.31 Transcript Type= NA
chr17	17970228	17972398	17970228	17972398	-	transcript1450.chr17.nnic@NA	transcript1450.chr17.nnic	NA	17970228	17972398	Gene ID= novel_gene_chr17_1451 TPM= 7.44 Transcript Type= NA
chr17	18015059	18039225	18015059	18039225	-	transcript1455.chr17.nic@ATPAF2	transcript1455.chr17.nic	protein_coding	18038881,18028615,18028232,18026319,18024624,18021745,18021123,18015059	18039225,18028659,18028377,18026416,18024704,18021857,18021238,18016260	Gene ID= ENSG00000171953.15 TPM= 3.19 Transcript Type= NA
chr17	18018010	18039168	18018010	18039168	-	ENST00000474627.7@ATPAF2	ENST00000474627.7	protein_coding	18038881,18028615,18028232,18026319,18024624,18021745,18021123,18018010	18039168,18028659,18028377,18026416,18024704,18021857,18021238,18018686	Gene ID= ENSG00000171953.15 TPM= 10.62 Transcript Type= protein_coding
chr17	18018262	18021264	18018262	18021264	-	ENST00000467560.5@ATPAF2	ENST00000467560.5	protein_coding	18021123,18018262	18021264,18018686	Gene ID= ENSG00000171953.15 TPM= 2.12 Transcript Type= retained_intron
chr17	18002926	18003164	18002926	18003164	-	transcript1467.chr17.nnic@NA	transcript1467.chr17.nnic	NA	18002926	18003164	Gene ID= novel_gene_chr17_1468 TPM= 8.5 Transcript Type= NA
chr17	18015881	18017206	18015881	18017206	+	transcript1465.chr17.nnic@NA	transcript1465.chr17.nnic	NA	18015881	18017206	Gene ID= novel_gene_chr17_1466 TPM= 16.99 Transcript Type= NA
chr17	18039292	18068404	18039292	18068404	+	ENST00000268719.8@GID4	ENST00000268719.8	protein_coding	18039292,18045147,18054127,18058868,18061845,18065180	18039902,18045206,18054234,18058969,18061975,18068404	Gene ID= ENSG00000141034.9 TPM= 10.62 Transcript Type= protein_coding
chr17	18087886	18107971	18087886	18107971	+	ENST00000225729.7@DRG2	ENST00000225729.7	protein_coding	18087886,18093813,18098270,18099017,18099633,18100363,18100569,18101493,18101921,18103801,18104623,18106433,18107154	18088087,18093973,18098359,18099077,18099723,18100435,18100659,18101590,18101997,18103889,18104681,18106486,18107971	Gene ID= ENSG00000108591.9 TPM= 35.23 Transcript Type= protein_coding
chr17	18087968	18107970	18087968	18107970	+	ENST00000467099.6@DRG2	ENST00000467099.6	protein_coding	18087968,18093813,18098270,18099017,18099633,18100569,18101493,18101921,18103801,18104623,18106433,18107154	18088087,18093968,18098359,18099093,18100435,18100659,18101590,18101997,18103889,18104681,18106486,18107970	Gene ID= ENSG00000108591.9 TPM= 4.43 Transcript Type= nonsense_mediated_decay
chr17	18095389	18097686	18095389	18097686	-	transcript1476.chr17.nnic@NA	transcript1476.chr17.nnic	NA	18095389	18097686	Gene ID= novel_gene_chr17_1477 TPM= 5.31 Transcript Type= NA
chr17	18106689	18108441	18106689	18108441	-	transcript1478.chr17.nnic@NA	transcript1478.chr17.nnic	NA	18106689	18108441	Gene ID= novel_gene_chr17_1479 TPM= 2.84 Transcript Type= NA
chr17	18183064	18209946	18183064	18209946	+	transcript1483.chr17.nnic@ALKBH5	transcript1483.chr17.nnic	protein_coding	18183064,18194955,18206815,18208219,18209786	18185013,18195035,18206970,18209448,18209946	Gene ID= ENSG00000091542.8 TPM= 20.61 Transcript Type= NA
chr17	18183990	18209954	18183990	18209954	+	transcript1486.chr17.nnic@ALKBH5	transcript1486.chr17.nnic	protein_coding	18183990,18184096,18194955,18206815,18208219	18184050,18185013,18195035,18206970,18209954	Gene ID= ENSG00000091542.8 TPM= 85.75 Transcript Type= NA
chr17	18184239	18209954	18184239	18209954	+	ENST00000399138.4@ALKBH5	ENST00000399138.4	protein_coding	18184239,18194955,18206815,18208219	18185013,18195035,18206970,18209954	Gene ID= ENSG00000091542.8 TPM= 70.88 Transcript Type= protein_coding
chr17	18244836	18259217	18244836	18259217	-	transcript1498.chr17.nic@FLII	transcript1498.chr17.nic	protein_coding	18258628,18256909,18256526,18255183,18254769,18254521,18254079,18253544,18253301,18252472,18251999,18251680,18251265,18250838,18249326,18249127,18248800,18248550,18247929,18247657,18247169,18246913,18246594,18246308,18246162,18245934,18245744,18245555,18245354,18244836	18259217,18257019,18256597,18255263,18254854,18254682,18254182,18253719,18253458,18252556,18252146,18251813,18251477,18251017,18249408,18249201,18248883,18248721,18248033,18247848,18247357,18247052,18246828,18246462,18246222,18246062,18245850,18245660,18245419,18245272	Gene ID= ENSG00000177731.15 TPM= 168.49 Transcript Type= NA
chr17	18244836	18258715	18244836	18258715	-	transcript1505.chr17.nnic@FLII	transcript1505.chr17.nnic	protein_coding	18258628,18256909,18255183,18254769,18254521,18254079,18253544,18253301,18252472,18251999,18251680,18251265,18250838,18249326,18249127,18248800,18248550,18247929,18247657,18247169,18246913,18246594,18246308,18246162,18245934,18245744,18245555,18245354,18244836	18258715,18257019,18255263,18254854,18254682,18254182,18253719,18253458,18252556,18252146,18251816,18251477,18251017,18249408,18249201,18248883,18248721,18248033,18247848,18247357,18247052,18246828,18246462,18246222,18246062,18245850,18245660,18245419,18245272	Gene ID= ENSG00000177731.15 TPM= 22.97 Transcript Type= NA
chr17	18244841	18258723	18244841	18258723	-	ENST00000545457.6@FLII	ENST00000545457.6	protein_coding	18258628,18256909,18256526,18255183,18254769,18254079,18253544,18253301,18252472,18251999,18251680,18251265,18250838,18249326,18249127,18248800,18248550,18247929,18247657,18247169,18246913,18246594,18246308,18246162,18245934,18245744,18245555,18245354,18244841	18258723,18257019,18256597,18255263,18254854,18254182,18253719,18253458,18252556,18252146,18251813,18251477,18251017,18249408,18249201,18248883,18248721,18248033,18247848,18247357,18247052,18246828,18246462,18246222,18246062,18245850,18245660,18245419,18245272	Gene ID= ENSG00000177731.15 TPM= 24.22 Transcript Type= protein_coding
chr17	18260534	18266552	18260534	18266552	+	ENST00000323019.8@MIEF2	ENST00000323019.8	protein_coding	18260534,18262714,18263086,18263710	18260737,18262867,18263248,18266552	Gene ID= ENSG00000177427.12 TPM= 14.87 Transcript Type= protein_coding
chr17	18272690	18274228	18272690	18274228	-	transcript1536.chr17.nnic@NA	transcript1536.chr17.nnic	NA	18272690	18274228	Gene ID= novel_gene_chr17_1537 TPM= 2.12 Transcript Type= NA
chr17	18324001	18327091	18324001	18327091	+	transcript1538.chr17.nnic@NA	transcript1538.chr17.nnic	NA	18324001	18327091	Gene ID= novel_gene_chr17_1539 TPM= 2.12 Transcript Type= NA
chr17	18328528	18363451	18328528	18363451	-	ENST00000354098.7@SHMT1	ENST00000354098.7	protein_coding	18363372,18355886,18353672,18348325,18347496,18340732,18340043,18333166,18330555,18329278,18328528	18363451,18356000,18353817,18348440,18347656,18340813,18340255,18333288,18330671,18329388,18328919	Gene ID= ENSG00000176974.19 TPM= 2.12 Transcript Type= protein_coding
chr17	18511221	18541920	18511221	18541920	-	ENST00000425211.5@AC107983.2	ENST00000425211.5	processed_transcript	18540927,18533347,18532712,18532506,18528573,18519482,18517185,18515346,18514589,18511221	18541920,18533391,18532902,18532597,18528747,18519674,18517473,18515770,18514681,18513458	Gene ID= ENSG00000273018.5 TPM= 2.12 Transcript Type= processed_transcript
chr17	18780995	18806714	18780995	18806714	+	ENST00000307767.12@TVP23B	ENST00000307767.12	protein_coding	18780995,18789353,18790896,18797579,18798812,18804138,18805541	18781305,18789435,18791040,18797668,18798943,18804266,18806714	Gene ID= ENSG00000171928.13 TPM= 40.36 Transcript Type= protein_coding
chr17	18856338	18931268	18856338	18931268	+	transcript1556.chr17.nic@PRPSAP2	transcript1556.chr17.nic	protein_coding	18856338,18865469,18865802,18867282,18872583,18877698,18882568,18889822,18911103,18923914,18928811,18930540	18856429,18865564,18865952,18867334,18872649,18877870,18882683,18889877,18911251,18923984,18928957,18931268	Gene ID= ENSG00000141127.14 TPM= 4.25 Transcript Type= NA
chr17	18858107	18931215	18858107	18931215	+	ENST00000268835.6@PRPSAP2	ENST00000268835.6	protein_coding	18858107,18865469,18865802,18867282,18872583,18877698,18882568,18889822,18911103,18923914,18928811,18930540	18858261,18865564,18865952,18867334,18872649,18877870,18882683,18889877,18911251,18923984,18928957,18931215	Gene ID= ENSG00000141127.14 TPM= 4.25 Transcript Type= protein_coding
chr17	18858108	18931215	18858108	18931215	+	transcript1563.chr17.nic@PRPSAP2	transcript1563.chr17.nic	protein_coding	18858108,18865469,18865802,18872583,18877698,18882568,18889822,18911103,18923914,18928811,18930540	18858261,18865564,18865952,18872649,18877870,18882683,18889877,18911251,18923984,18928957,18931215	Gene ID= ENSG00000141127.14 TPM= 2.12 Transcript Type= NA
chr17	18968789	19004804	18968789	19004804	-	ENST00000388995.10@FAM83G	ENST00000388995.10	protein_coding	19004709,19003520,18988247,18979549,18977584,18968789	19004804,19004169,18988414,18979673,18978850,18971748	Gene ID= ENSG00000188522.14 TPM= 5.31 Transcript Type= protein_coding
chr17	19020673	19047637	19020673	19047637	-	ENST00000284154.9@GRAP	ENST00000284154.9	protein_coding	19046849,19041807,19035958,19024215,19020673	19047637,19041904,19036080,19024383,19022144	Gene ID= ENSG00000154016.13 TPM= 6.37 Transcript Type= protein_coding
chr17	19237074	19335473	19237074	19335473	+	transcript1576.chr17.nnic@EPN2	transcript1576.chr17.nnic	protein_coding	19237074,19281955,19282950,19309885,19312052,19313123,19328711,19329561,19331853,19333956	19237125,19282077,19283714,19309997,19312144,19313279,19328887,19329647,19332068,19335473	Gene ID= ENSG00000072134.15 TPM= 2.87 Transcript Type= NA
chr17	19237351	19336715	19237351	19336715	+	transcript1585.chr17.nic@EPN2	transcript1585.chr17.nic	protein_coding	19237351,19281955,19282950,19309885,19312052,19313123,19328711,19329561,19331853,19333956	19237531,19282077,19283714,19309997,19312144,19313279,19328887,19329647,19332068,19336715	Gene ID= ENSG00000072134.15 TPM= 19.68 Transcript Type= NA
chr17	19237377	19336715	19237377	19336715	+	ENST00000347697.6@EPN2	ENST00000347697.6	protein_coding	19237377,19281955,19282950,19309885,19312052,19313105,19328711,19329561,19331853,19333956	19237531,19282077,19283714,19309997,19312144,19313279,19328887,19329647,19332068,19336715	Gene ID= ENSG00000072134.15 TPM= 23.93 Transcript Type= protein_coding
chr17	19237341	19336715	19237341	19336715	+	ENST00000314728.9@EPN2	ENST00000314728.9	protein_coding	19237341,19281955,19282950,19285620,19309885,19312052,19313105,19328711,19329561,19331853,19333956	19237531,19282077,19283714,19285790,19309997,19312144,19313279,19328887,19329647,19332068,19336715	Gene ID= ENSG00000072134.15 TPM= 14.37 Transcript Type= protein_coding
chr17	19343174	19362723	19343174	19362723	-	transcript1598.chr17.nnic@B9D1	transcript1598.chr17.nnic	protein_coding	19362507,19360320,19357840,19347784,19347269,19343790,19343174	19362723,19360388,19357951,19347880,19347331,19343857,19343360	Gene ID= ENSG00000108641.14 TPM= 2.12 Transcript Type= NA
chr17	19343170	19362713	19343170	19362713	-	ENST00000261499.8@B9D1	ENST00000261499.8	protein_coding	19362507,19360320,19357840,19347784,19347269,19343790,19343170	19362713,19360388,19357951,19347880,19347331,19343857,19343461	Gene ID= ENSG00000108641.14 TPM= 6.37 Transcript Type= protein_coding
chr17	19378253	19383544	19378253	19383544	+	ENST00000395602.8@MAPK7	ENST00000395602.8	protein_coding	19378253,19378896,19379782,19380608,19381781,19382813,19383078	19378542,19379132,19379947,19381686,19382466,19382946,19383544	Gene ID= ENSG00000166484.19 TPM= 2.66 Transcript Type= protein_coding
chr17	19378323	19383544	19378323	19383544	+	ENST00000395604.7@MAPK7	ENST00000395604.7	protein_coding	19378323,19378896,19379782,19380608,19381781,19382813,19383078	19378630,19379132,19379947,19381686,19382466,19382946,19383544	Gene ID= ENSG00000166484.19 TPM= 3.72 Transcript Type= protein_coding
chr17	19383442	19387190	19383442	19387190	-	ENST00000395592.6@MFAP4	ENST00000395592.6	protein_coding	19387041,19386760,19386310,19385358,19385099,19383442	19387190,19386838,19386464,19385454,19385281,19384709	Gene ID= ENSG00000166482.11 TPM= 22.84 Transcript Type= protein_coding
chr17	19383442	19387240	19383442	19387240	-	ENST00000299610.4@MFAP4	ENST00000299610.4	protein_coding	19387150,19386760,19386310,19385358,19385099,19383442	19387240,19386838,19386464,19385454,19385281,19384709	Gene ID= ENSG00000166482.11 TPM= 51.51 Transcript Type= protein_coding
chr17	19445970	19446852	19445970	19446852	-	ENST00000458332.1@AC004448.1	ENST00000458332.1	processed_pseudogene	19445970	19446852	Gene ID= ENSG00000189343.7 TPM= 4.25 Transcript Type= processed_pseudogene
chr17	19533811	19578906	19533811	19578906	+	transcript1617.chr17.nic@SLC47A1	transcript1617.chr17.nic	protein_coding	19533811,19542393,19546435,19547985,19549635,19551424,19555212,19555593,19555796,19555995,19560188,19560418,19566790,19567096,19572780,19577327	19534074,19542494,19546503,19548133,19549677,19551468,19555309,19555690,19555909,19556062,19560296,19560493,19566859,19567228,19572861,19578906	Gene ID= ENSG00000142494.13 TPM= 3.19 Transcript Type= NA
chr17	19533811	19579030	19533811	19579030	+	transcript1619.chr17.nic@SLC47A1	transcript1619.chr17.nic	protein_coding	19533811,19542393,19546435,19547985,19549635,19551424,19555212,19555593,19555796,19555995,19560188,19560418,19566790,19567096,19577327	19534074,19542494,19546503,19548133,19549677,19551468,19555309,19555690,19555909,19556062,19560296,19560493,19566859,19567228,19579030	Gene ID= ENSG00000142494.13 TPM= 2.12 Transcript Type= NA
chr17	19533854	19579034	19533854	19579034	+	ENST00000270570.8@SLC47A1	ENST00000270570.8	protein_coding	19533854,19542393,19546435,19547985,19549635,19551424,19555212,19555593,19555796,19555995,19560188,19560418,19566790,19567096,19571478,19572780,19577327	19534074,19542494,19546503,19548133,19549677,19551468,19555309,19555690,19555909,19556062,19560296,19560493,19566859,19567228,19571572,19572861,19579034	Gene ID= ENSG00000142494.13 TPM= 4.25 Transcript Type= protein_coding
chr17	19648723	19677596	19648723	19677596	+	ENST00000395575.6@ALDH3A2	ENST00000395575.6	protein_coding	19648723,19648935,19651547,19652547,19656366,19657745,19661127,19663333,19664948,19671721,19675558	19648843,19649124,19651778,19652632,19656574,19657862,19661268,19663499,19665047,19671956,19677596	Gene ID= ENSG00000072210.18 TPM= 9.01 Transcript Type= protein_coding
chr17	19648782	19675747	19648782	19675747	+	transcript1647.chr17.nnic@ALDH3A2	transcript1647.chr17.nnic	protein_coding	19648782,19651547,19652547,19661127,19663333,19664948,19671721,19675558	19649124,19651778,19652632,19661268,19663499,19665047,19671956,19675747	Gene ID= ENSG00000072210.18 TPM= 4.58 Transcript Type= NA
chr17	19648723	19676525	19648723	19676525	+	ENST00000581518.5@ALDH3A2	ENST00000581518.5	protein_coding	19648723,19651547,19652547,19656366,19657745,19661127,19663333,19664948,19671721,19673151,19675496,19675562	19649124,19651778,19652632,19656574,19657862,19661268,19663499,19665047,19671956,19673275,19675499,19676525	Gene ID= ENSG00000072210.18 TPM= 3.87 Transcript Type= protein_coding
chr17	19648751	19677596	19648751	19677596	+	ENST00000339618.8@ALDH3A2	ENST00000339618.8	protein_coding	19648751,19651547,19652547,19656366,19657745,19661127,19663333,19664948,19671721,19673151,19675558	19649124,19651778,19652632,19656574,19657862,19661268,19663499,19665047,19671956,19673275,19677596	Gene ID= ENSG00000072210.18 TPM= 9.18 Transcript Type= protein_coding
chr17	19904302	19977837	19904302	19977837	-	ENST00000225737.10@AKAP10	ENST00000225737.10	protein_coding	19977592,19968414,19962840,19958014,19947407,19941826,19940887,19939713,19936286,19931805,19924408,19920036,19909926,19909181,19904302	19977837,19968461,19963022,19958571,19947505,19941910,19941010,19939849,19936430,19931978,19924517,19920118,19909978,19909276,19906232	Gene ID= ENSG00000108599.14 TPM= 1.06 Transcript Type= protein_coding
chr17	20073623	20237179	20073623	20237179	+	transcript1671.chr17.nic@SPECC1	transcript1671.chr17.nic	protein_coding	20073623,20096631,20110427,20204333,20227413,20231758,20232200,20236860	20073701,20096798,20110562,20205912,20227620,20231831,20232405,20237179	Gene ID= ENSG00000128487.16 TPM= 3.19 Transcript Type= NA
chr17	20921045	20930046	20921045	20930046	+	ENST00000443508.6@CCDC144NL-AS1	ENST00000443508.6	antisense_RNA	20921045,20924359,20929431	20921169,20924833,20930046	Gene ID= ENSG00000233098.8 TPM= 5.31 Transcript Type= antisense_RNA
chr17	21014975	21020269	21014975	21020269	-	transcript1679.chr17.nic@USP22	transcript1679.chr17.nic	protein_coding	21019084,21017942,21014975	21020269,21018111,21015899	Gene ID= ENSG00000124422.11 TPM= 7.44 Transcript Type= NA
chr17	21014975	21020269	21014975	21020269	-	transcript1680.chr17.nic@USP22	transcript1680.chr17.nic	protein_coding	21019084,21014975	21020269,21018111	Gene ID= ENSG00000124422.11 TPM= 11.68 Transcript Type= NA
chr17	20999593	21043039	20999593	21043039	-	ENST00000261497.8@USP22	ENST00000261497.8	protein_coding	21042665,21028542,21021113,21019084,21017942,21015752,21012830,21011151,21007870,21006896,21004928,21004202,20999593	21043039,21028674,21021226,21019185,21018111,21015899,21012935,21011309,21007996,21006987,21004990,21004351,21003073	Gene ID= ENSG00000124422.11 TPM= 123.21 Transcript Type= protein_coding
chr17	21126652	21192030	21126652	21192030	+	ENST00000395511.7@DHRS7B	ENST00000395511.7	protein_coding	21126652,21172018,21178233,21183594,21184371,21188711,21190948	21126991,21172196,21178342,21183810,21184463,21188863,21192030	Gene ID= ENSG00000109016.17 TPM= 23.37 Transcript Type= protein_coding
chr17	21166155	21191418	21166155	21191418	+	transcript1689.chr17.nic@DHRS7B	transcript1689.chr17.nic	protein_coding	21166155,21172018,21178233,21183594,21184371,21188711,21190948	21166471,21172196,21178342,21183810,21184463,21188863,21191418	Gene ID= ENSG00000109016.17 TPM= 12.75 Transcript Type= NA
chr17	21126964	21128873	21126964	21128873	+	ENST00000581020.1@DHRS7B	ENST00000581020.1	protein_coding	21126964	21128873	Gene ID= ENSG00000109016.17 TPM= 2.12 Transcript Type= retained_intron
chr17	21197958	21214161	21197958	21214161	-	ENST00000577419.5@TMEM11	ENST00000577419.5	protein_coding	21214091,21210936,21197958	21214161,21211227,21198840	Gene ID= ENSG00000178307.9 TPM= 62.67 Transcript Type= processed_transcript
chr17	21238870	21253410	21238870	21253410	-	ENST00000611551.1@NATD1	ENST00000611551.1	protein_coding	21253159,21244106,21238870	21253410,21244224,21243429	Gene ID= ENSG00000274180.1 TPM= 61.61 Transcript Type= protein_coding
chr17	21249056	21251309	21249056	21251309	+	transcript1698.chr17.nnic@NA	transcript1698.chr17.nnic	NA	21249056	21251309	Gene ID= novel_gene_chr17_1699 TPM= 5.31 Transcript Type= NA
chr17	21284707	21315228	21284707	21315228	+	transcript1702.chr17.nnic@MAP2K3	transcript1702.chr17.nnic	protein_coding	21284707,21284797,21298413,21298878,21300545,21300874,21302143,21303183,21304426,21305051,21312142,21313492,21314147	21284757,21284969,21298479,21298926,21300658,21300993,21302259,21303234,21304553,21305128,21312281,21313537,21315228	Gene ID= ENSG00000034152.18 TPM= 26.2 Transcript Type= NA
chr17	21284672	21315240	21284672	21315240	+	ENST00000342679.8@MAP2K3	ENST00000342679.8	protein_coding	21284672,21298413,21298878,21300545,21300874,21302143,21303183,21304426,21305051,21312142,21313492,21314147	21284969,21298479,21298926,21300658,21300993,21302259,21303234,21304553,21305128,21312281,21313537,21315240	Gene ID= ENSG00000034152.18 TPM= 136.31 Transcript Type= protein_coding
chr17	21288036	21315213	21288036	21315213	+	ENST00000361818.9@MAP2K3	ENST00000361818.9	protein_coding	21288036,21298413,21298878,21300545,21300874,21302143,21303183,21304426,21305051,21312142,21313492,21314147	21288091,21298479,21298926,21300658,21300993,21302259,21303234,21304553,21305128,21312281,21313537,21315213	Gene ID= ENSG00000034152.18 TPM= 1.06 Transcript Type= protein_coding
chr17	21284672	21315213	21284672	21315213	+	ENST00000395491.6@MAP2K3	ENST00000395491.6	protein_coding	21284672,21296086,21298413,21298878,21300545,21300874,21302143,21303183,21304426,21305051,21312142,21313492,21314147	21284969,21296210,21298479,21298926,21300658,21300993,21302259,21303234,21304553,21305128,21312281,21313537,21315213	Gene ID= ENSG00000034152.18 TPM= 7.08 Transcript Type= nonsense_mediated_decay
chr17	21376197	21419872	21376197	21419872	+	ENST00000583088.5@KCNJ12	ENST00000583088.5	protein_coding	21376197,21408519,21415287	21376913,21408640,21419872	Gene ID= ENSG00000184185.9 TPM= 35.05 Transcript Type= protein_coding
chr17	21528310	21551680	21528310	21551680	-	ENST00000391411.9@C17orf51	ENST00000391411.9	protein_coding	21550996,21528310	21551680,21535538	Gene ID= ENSG00000212719.10 TPM= 1.06 Transcript Type= protein_coding
chr17	21527363	21528512	21527363	21528512	-	transcript1724.chr17.nnic@NA	transcript1724.chr17.nnic	NA	21527363	21528512	Gene ID= novel_gene_chr17_1725 TPM= 2.12 Transcript Type= NA
chr17	27294093	27313631	27294093	27313631	+	ENST00000467843.6@WSB1	ENST00000467843.6	protein_coding	27294093,27301788,27303367,27304780,27306782,27307744,27310061,27311509,27312210	27294435,27301956,27303635,27304911,27306882,27309272,27310174,27311616,27313631	Gene ID= ENSG00000109046.14 TPM= 20.18 Transcript Type= retained_intron
chr17	27294114	27312887	27294114	27312887	+	transcript1737.chr17.nic@WSB1	transcript1737.chr17.nic	protein_coding	27294114,27301881,27303367,27304780,27306782,27309100,27310061,27311509,27312210	27294435,27301956,27303635,27304911,27306882,27309272,27310174,27311616,27312887	Gene ID= ENSG00000109046.14 TPM= 2.12 Transcript Type= NA
chr17	27294080	27312887	27294080	27312887	+	transcript1740.chr17.nic@WSB1	transcript1740.chr17.nic	protein_coding	27294080,27303367,27304780,27306782,27307744,27310061,27311509,27312210	27294435,27303635,27304911,27306882,27309272,27310174,27311616,27312887	Gene ID= ENSG00000109046.14 TPM= 2.12 Transcript Type= NA
chr17	27294220	27295557	27294220	27295557	+	transcript1744.chr17.nnic@NA	transcript1744.chr17.nnic	NA	27294220	27295557	Gene ID= novel_gene_chr17_1745 TPM= 2.12 Transcript Type= NA
chr17	27629798	27649560	27629798	27649560	+	ENST00000302228.9@LGALS9	ENST00000302228.9	protein_coding	27629798,27638263,27640572,27642238,27645314,27645861,27646547,27647030,27647270,27648836	27631304,27638354,27640773,27642348,27645349,27645911,27646588,27647118,27647432,27649560	Gene ID= ENSG00000168961.16 TPM= 9.56 Transcript Type= protein_coding
chr17	28319095	28328685	28319095	28328685	+	ENST00000226230.7@TMEM97	ENST00000226230.7	protein_coding	28319095,28325503,28326534	28319365,28325647,28328685	Gene ID= ENSG00000109084.13 TPM= 5.31 Transcript Type= protein_coding
chr17	28328329	28335449	28328329	28335449	-	ENST00000585089.5@IFT20	ENST00000585089.5	protein_coding	28335340,28332146,28331859,28330443,28329173,28328329	28335449,28332382,28331987,28330528,28329276,28328733	Gene ID= ENSG00000109083.13 TPM= 8.85 Transcript Type= protein_coding
chr17	28328329	28335440	28328329	28335440	-	ENST00000395418.7@IFT20	ENST00000395418.7	protein_coding	28335340,28331859,28330443,28329173,28328329	28335440,28331987,28330528,28329276,28328733	Gene ID= ENSG00000109083.13 TPM= 2.47 Transcript Type= protein_coding
chr17	28328337	28335439	28328337	28335439	-	ENST00000585313.5@IFT20	ENST00000585313.5	protein_coding	28335340,28332146,28331859,28330443,28329173,28328337	28335439,28332181,28331987,28330528,28329276,28328733	Gene ID= ENSG00000109083.13 TPM= 2.47 Transcript Type= protein_coding
chr17	28335704	28347009	28335704	28347009	+	ENST00000226225.6@TNFAIP1	ENST00000226225.6	protein_coding	28335704,28339408,28340309,28341237,28341404,28342247,28344364	28335856,28339726,28340478,28341326,28341456,28342442,28347009	Gene ID= ENSG00000109079.9 TPM= 161.45 Transcript Type= protein_coding
chr17	28343135	28345151	28343135	28345151	-	transcript1804.chr17.nnic@NA	transcript1804.chr17.nnic	NA	28343135	28345151	Gene ID= novel_gene_chr17_1805 TPM= 3.19 Transcript Type= NA
chr17	28347177	28357522	28347177	28357522	-	ENST00000540200.5@POLDIP2	ENST00000540200.5	protein_coding	28357288,28355795,28354488,28353695,28353241,28352912,28351664,28350766,28350438,28349083,28347177	28357522,28355876,28354585,28353791,28353316,28353019,28351800,28350792,28350563,28349162,28348231	Gene ID= ENSG00000004142.11 TPM= 360.07 Transcript Type= protein_coding
chr17	28357581	28363683	28357581	28363683	+	ENST00000292114.7@TMEM199	ENST00000292114.7	protein_coding	28357581,28358916,28359315,28360529,28360735,28361157	28357881,28358989,28359404,28360571,28360847,28363683	Gene ID= ENSG00000244045.12 TPM= 7.44 Transcript Type= protein_coding
chr17	28367276	28370822	28367276	28370822	-	ENST00000226218.8@VTN	ENST00000226218.8	protein_coding	28370140,28369927,28369507,28369289,28368872,28368521,28367715,28367276	28370822,28370046,28369851,28369428,28369028,28368673,28368059,28367481	Gene ID= ENSG00000109072.13 TPM= 139.67 Transcript Type= protein_coding
chr17	28371662	28404049	28371662	28404049	+	ENST00000585482.5@SARM1	ENST00000585482.5	protein_coding	28371662,28381203,28384357,28384839,28385040,28388174,28388350,28395905,28396157	28372502,28381821,28384569,28384930,28385275,28388276,28388539,28396026,28404049	Gene ID= ENSG00000004139.13 TPM= 3.19 Transcript Type= protein_coding
chr17	28467822	28468406	28467822	28468406	+	ENST00000571702.1@RPS7P1	ENST00000571702.1	processed_pseudogene	28467822	28468406	Gene ID= ENSG00000263266.2 TPM= 24.43 Transcript Type= processed_pseudogene
chr17	28546703	28549159	28546703	28549159	-	transcript1828.chr17.nnic@NA	transcript1828.chr17.nnic	NA	28546703	28549159	Gene ID= novel_gene_chr17_1829 TPM= 2.66 Transcript Type= NA
chr17	28546707	28552668	28546707	28552668	-	ENST00000335765.8@UNC119	ENST00000335765.8	protein_coding	28552338,28548592,28547999,28547677,28546707	28552668,28548705,28548101,28547849,28547409	Gene ID= ENSG00000109103.11 TPM= 18.59 Transcript Type= protein_coding
chr17	28546708	28552631	28546708	28552631	-	ENST00000301032.8@UNC119	ENST00000301032.8	protein_coding	28552338,28548592,28547999,28546708	28552631,28548705,28548101,28547849	Gene ID= ENSG00000109103.11 TPM= 5.31 Transcript Type= protein_coding
chr17	28553387	28571872	28553387	28571872	-	ENST00000308360.7@PIGS	ENST00000308360.7	protein_coding	28571463,28571049,28570852,28563818,28563431,28561422,28560049,28558476,28556827,28556166,28554851,28553387	28571872,28571188,28570963,28563907,28563522,28561629,28560191,28558590,28556972,28556266,28555061,28554495	Gene ID= ENSG00000087111.20 TPM= 68.69 Transcript Type= protein_coding
chr17	28553387	28571536	28553387	28571536	-	ENST00000395346.6@PIGS	ENST00000395346.6	protein_coding	28571049,28570852,28563818,28563431,28561422,28560049,28558476,28556827,28556166,28554851,28553387	28571536,28570963,28563907,28563522,28561629,28560191,28558590,28556972,28556266,28555061,28554495	Gene ID= ENSG00000087111.20 TPM= 17.71 Transcript Type= protein_coding
chr17	28553383	28571528	28553383	28571528	-	ENST00000268758.13@PIGS	ENST00000268758.13	protein_coding	28571463,28570852,28563818,28563431,28561422,28560049,28558476,28556827,28556166,28554851,28553383	28571528,28570963,28563907,28563522,28561629,28560191,28558590,28556972,28556266,28555061,28554495	Gene ID= ENSG00000087111.20 TPM= 8.15 Transcript Type= nonsense_mediated_decay
chr17	28573115	28576948	28573115	28576948	-	ENST00000395321.6@ALDOC	ENST00000395321.6	protein_coding	28576801,28575965,28575421,28575123,28574952,28574696,28574494,28574067,28573735,28573115	28576948,28576020,28575544,28575334,28575006,28574856,28574577,28574241,28573934,28573621	Gene ID= ENSG00000109107.13 TPM= 58.95 Transcript Type= protein_coding
chr17	28573115	28577264	28573115	28577264	-	ENST00000226253.8@ALDOC	ENST00000226253.8	protein_coding	28576801,28575421,28575123,28574952,28574696,28574494,28574067,28573735,28573115	28577264,28575544,28575334,28575006,28574856,28574577,28574241,28573934,28573621	Gene ID= ENSG00000109107.13 TPM= 198.09 Transcript Type= protein_coding
chr17	28603430	28604678	28603430	28604678	-	transcript1841.chr17.nnic@NA	transcript1841.chr17.nnic	NA	28603430	28604678	Gene ID= novel_gene_chr17_1842 TPM= 2.12 Transcript Type= NA
chr17	28639061	28645155	28639061	28645155	-	ENST00000580882.5@KIAA0100	ENST00000580882.5	protein_coding	28644989,28644058,28643610,28643164,28642869,28642275,28641889,28640560,28639901,28639575,28639061	28645155,28644187,28643659,28643311,28642987,28642335,28642078,28640683,28640025,28639642,28639460	Gene ID= ENSG00000007202.14 TPM= 2.12 Transcript Type= retained_intron
chr17	28614440	28645131	28614440	28645131	-	ENST00000528896.6@KIAA0100	ENST00000528896.6	protein_coding	28644989,28644058,28643610,28643164,28642869,28642275,28641889,28640560,28639901,28639575,28639315,28638524,28638252,28637836,28636965,28634517,28633895,28633549,28633283,28632942,28632049,28631820,28631479,28628265,28624233,28623760,28621399,28620988,28620509,28619860,28619654,28618791,28617232,28616889,28616618,28616379,28616096,28615664,28614440	28645131,28644187,28643659,28643311,28642987,28642335,28642078,28640683,28640025,28639642,28639460,28638642,28638415,28638094,28637170,28635609,28634086,28633751,28633401,28633162,28632239,28631919,28631681,28628559,28624390,28623966,28621498,28621170,28620630,28620015,28619775,28618971,28617318,28616999,28616753,28616509,28616197,28615798,28615246	Gene ID= ENSG00000007202.14 TPM= 29.74 Transcript Type= protein_coding
chr17	28648589	28662185	28648589	28662185	-	ENST00000592250.5@SDF2	ENST00000592250.5	protein_coding	28662046,28655287,28648589	28662185,28655483,28649276	Gene ID= ENSG00000132581.9 TPM= 21.24 Transcript Type= processed_transcript
chr17	28662091	28702684	28662091	28702684	+	ENST00000314616.10@SUPT6H	ENST00000314616.10	protein_coding	28662091,28673371,28674283,28674537,28674970,28675401,28676157,28677715,28678076,28678545,28678821,28681256,28681882,28682727,28682942,28683268,28683621,28684586,28684844,28686339,28686654,28687088,28687304,28688091,28689354,28690082,28690921,28693696,28695352,28696844,28697620,28697906,28699781,28700173,28700346,28700941,28701439	28662342,28673510,28674441,28674613,28675162,28675485,28676430,28677816,28678192,28678634,28678963,28681404,28681980,28682856,28683092,28683422,28683816,28684725,28684961,28686415,28686789,28687225,28687471,28688218,28689561,28690229,28691063,28693836,28695547,28697082,28697733,28698030,28699893,28700250,28700512,28701128,28702684	Gene ID= ENSG00000109111.14 TPM= 3.19 Transcript Type= protein_coding
chr17	28699568	28702231	28699568	28702231	+	transcript1853.chr17.nic@SUPT6H	transcript1853.chr17.nic	protein_coding	28699568,28700173,28700346,28700941,28701439	28699893,28700250,28700512,28701128,28702231	Gene ID= ENSG00000109111.14 TPM= 16.99 Transcript Type= NA
chr17	28663830	28666110	28663830	28666110	-	transcript1855.chr17.nnic@NA	transcript1855.chr17.nnic	NA	28663830	28666110	Gene ID= novel_gene_chr17_1856 TPM= 10.62 Transcript Type= NA
chr17	28714284	28718415	28714284	28718415	-	ENST00000301043.10@RAB34	ENST00000301043.10	protein_coding	28718122,28717213,28716903,28715993,28715800,28715641,28715456,28715195,28715032,28714793,28714284	28718415,28717425,28716994,28716058,28715901,28715705,28715507,28715276,28715122,28714900,28714710	Gene ID= ENSG00000109113.19 TPM= 3.27 Transcript Type= protein_coding
chr17	28714281	28717890	28714281	28717890	-	ENST00000395245.8@RAB34	ENST00000395245.8	protein_coding	28717213,28716903,28715993,28715800,28715641,28715456,28715195,28715032,28714793,28714281	28717890,28716994,28716058,28715901,28715705,28715507,28715276,28715122,28714900,28714710	Gene ID= ENSG00000109113.19 TPM= 8.58 Transcript Type= protein_coding
chr17	28714284	28718182	28714284	28718182	-	transcript1861.chr17.nic@RAB34	transcript1861.chr17.nic	protein_coding	28716903,28715993,28715800,28715641,28715456,28715195,28715032,28714793,28714284	28718182,28716058,28715901,28715705,28715507,28715276,28715122,28714900,28714710	Gene ID= ENSG00000109113.19 TPM= 3.27 Transcript Type= NA
chr17	28714284	28717860	28714284	28717860	-	transcript1863.chr17.nic@RAB34	transcript1863.chr17.nic	protein_coding	28717213,28716903,28715800,28715641,28715456,28715195,28715032,28714793,28714284	28717860,28716994,28715901,28715705,28715507,28715276,28715122,28714900,28714710	Gene ID= ENSG00000109113.19 TPM= 2.92 Transcript Type= NA
chr17	28719393	28724359	28719393	28724359	+	ENST00000422514.6@RPL23A	ENST00000422514.6	protein_coding	28719393,28720707,28722723,28723571,28723867	28720030,28720890,28722899,28723640,28724359	Gene ID= ENSG00000198242.13 TPM= 196.5 Transcript Type= protein_coding
chr17	28724348	28726208	28724348	28726208	-	ENST00000292090.7@TLCD1	ENST00000292090.7	protein_coding	28725904,28725481,28725304,28724348	28726208,28725563,28725386,28724893	Gene ID= ENSG00000160606.10 TPM= 1.06 Transcript Type= protein_coding
chr17	28743984	28750958	28743984	28750958	+	ENST00000262395.9@TRAF4	ENST00000262395.9	protein_coding	28743984,28747213,28747843,28748017,28748262,28748511,28748945	28744255,28747264,28747947,28748178,28748423,28748666,28750958	Gene ID= ENSG00000076604.14 TPM= 1.06 Transcript Type= protein_coding
chr17	28755980	28842823	28755980	28842823	-	ENST00000581407.5@FAM222B	ENST00000581407.5	protein_coding	28842682,28766586,28755980	28842823,28766707,28759876	Gene ID= ENSG00000173065.13 TPM= 5.31 Transcript Type= protein_coding
chr17	28757390	28812435	28757390	28812435	-	ENST00000452648.7@FAM222B	ENST00000452648.7	protein_coding	28812209,28766586,28757390	28812435,28766707,28759876	Gene ID= ENSG00000173065.13 TPM= 5.31 Transcript Type= protein_coding
chr17	28854938	28861067	28854938	28861067	+	ENST00000254928.9@ERAL1	ENST00000254928.9	protein_coding	28854938,28856264,28856505,28857939,28858146,28858374,28858576,28858964,28859203,28860431	28855317,28856391,28856582,28857985,28858207,28858486,28858824,28859113,28859283,28861067	Gene ID= ENSG00000132591.11 TPM= 54.17 Transcript Type= protein_coding
chr17	28879339	28897677	28879339	28897677	-	transcript1900.chr17.nnic@FLOT2	transcript1900.chr17.nnic	protein_coding	28897526,28884225,28883108,28882573,28882337,28882118,28881814,28881192,28880713,28879339	28897677,28884315,28883231,28882691,28882450,28882237,28882028,28881375,28880862,28880599	Gene ID= ENSG00000132589.15 TPM= 18.5 Transcript Type= NA
chr17	28879335	28897679	28879335	28897679	-	ENST00000394908.8@FLOT2	ENST00000394908.8	protein_coding	28897526,28888945,28884225,28883108,28882573,28882337,28882118,28881814,28881192,28880713,28879335	28897679,28889026,28884315,28883231,28882691,28882450,28882237,28882028,28881375,28880862,28880599	Gene ID= ENSG00000132589.15 TPM= 211.82 Transcript Type= protein_coding
chr17	28879339	28897653	28879339	28897653	-	ENST00000580805.5@FLOT2	ENST00000580805.5	protein_coding	28897526,28888945,28885857,28884225,28883108,28882573,28882337,28882118,28881814,28881192,28880713,28879339	28897653,28889026,28885947,28884315,28883231,28882691,28882450,28882237,28882028,28881375,28880862,28880599	Gene ID= ENSG00000132589.15 TPM= 15.32 Transcript Type= nonsense_mediated_decay
chr17	28879341	28897652	28879341	28897652	-	ENST00000585169.5@FLOT2	ENST00000585169.5	protein_coding	28897526,28888945,28885857,28883108,28882573,28882337,28882118,28881814,28881192,28880713,28879341	28897652,28889026,28885947,28883231,28882691,28882450,28882237,28882028,28881375,28880862,28880599	Gene ID= ENSG00000132589.15 TPM= 15.67 Transcript Type= protein_coding
chr17	28897781	28903071	28897781	28903071	-	ENST00000394901.7@DHRS13	ENST00000394901.7	protein_coding	28902583,28901493,28900990,28897781	28903071,28901616,28901301,28898892	Gene ID= ENSG00000167536.13 TPM= 7.62 Transcript Type= protein_coding
chr17	28897784	28902965	28897784	28902965	-	ENST00000426464.2@DHRS13	ENST00000426464.2	protein_coding	28902818,28900990,28897784	28902965,28901301,28898892	Gene ID= ENSG00000167536.13 TPM= 1.77 Transcript Type= protein_coding
chr17	28897781	28903071	28897781	28903071	-	ENST00000378895.8@DHRS13	ENST00000378895.8	protein_coding	28902818,28902583,28901493,28900990,28897781	28903071,28902701,28901616,28901301,28898892	Gene ID= ENSG00000167536.13 TPM= 6.55 Transcript Type= protein_coding
chr17	28905250	28951771	28905250	28951771	-	ENST00000332830.8@PHF12	ENST00000332830.8	protein_coding	28950895,28950065,28926991,28923909,28921688,28919143,28917285,28913879,28912482,28911112,28910226,28908783,28907590,28906856,28905250	28951771,28950246,28927063,28924302,28921808,28919275,28917449,28914037,28913277,28911237,28910369,28908881,28907672,28906994,28906517	Gene ID= ENSG00000109118.13 TPM= 12.75 Transcript Type= protein_coding
chr17	29117453	29130323	29117453	29130323	-	transcript1918.chr17.nnic@MYO18A	transcript1918.chr17.nnic	protein_coding	29127852,29122166,29121851,29121547,29120998,29120616,29119340,29118377,29117453	29130323,29122255,29121957,29121725,29121211,29120761,29119437,29118446,29118191	Gene ID= ENSG00000196535.15 TPM= 177.38 Transcript Type= NA
chr17	29101753	29107667	29101753	29107667	-	transcript1923.chr17.nic@MYO18A	transcript1923.chr17.nic	protein_coding	29107080,29101753	29107667,29103664	Gene ID= ENSG00000196535.15 TPM= 19.12 Transcript Type= NA
chr17	29081641	29084808	29081641	29084808	+	transcript1925.chr17.nnic@NA	transcript1925.chr17.nnic	NA	29081641	29084808	Gene ID= novel_gene_chr17_1926 TPM= 4.25 Transcript Type= NA
chr17	29100299	29101029	29100299	29101029	+	transcript1927.chr17.nnic@NA	transcript1927.chr17.nnic	NA	29100299	29101029	Gene ID= novel_gene_chr17_1928 TPM= 2.12 Transcript Type= NA
chr17	29266911	29294146	29266911	29294146	-	transcript1932.chr17.nic@NUFIP2	transcript1932.chr17.nic	protein_coding	29293783,29285992,29266911	29294146,29287716,29267530	Gene ID= ENSG00000108256.8 TPM= 2.12 Transcript Type= NA
chr17	29257340	29263876	29257340	29263876	-	transcript1934.chr17.nnic@NA	transcript1934.chr17.nnic	NA	29257340	29263876	Gene ID= novel_gene_chr17_1935 TPM= 5.31 Transcript Type= NA
chr17	29519450	29545314	29519450	29545314	+	transcript1941.chr17.nnic@TAOK1	transcript1941.chr17.nnic	protein_coding	29519450,29522280,29530407,29534118,29542559	29519570,29522519,29530619,29534300,29545314	Gene ID= ENSG00000160551.11 TPM= 3.19 Transcript Type= NA
chr17	29532357	29533756	29532357	29533756	-	transcript1943.chr17.nnic@NA	transcript1943.chr17.nnic	NA	29532357	29533756	Gene ID= novel_gene_chr17_1944 TPM= 2.12 Transcript Type= NA
chr17	29568084	29573157	29568084	29573157	+	transcript1958.chr17.nic@TP53I13	transcript1958.chr17.nic	protein_coding	29568084,29569018,29569318,29571591,29571857,29572142,29572812	29568548,29569086,29569359,29571719,29572057,29572697,29573157	Gene ID= ENSG00000167543.15 TPM= 5.46 Transcript Type= NA
chr17	29568716	29582338	29568716	29582338	+	transcript1962.chr17.nnic@TP53I13	transcript1962.chr17.nnic	protein_coding	29568716,29569018,29569318,29571591,29571857,29572142,29579791	29568830,29569086,29569359,29571719,29572057,29572697,29582338	Gene ID= ENSG00000167543.15 TPM= 4.25 Transcript Type= NA
chr17	29568622	29573157	29568622	29573157	+	transcript1966.chr17.nnic@TP53I13	transcript1966.chr17.nnic	protein_coding	29568622,29569018,29569318,29571857,29572142,29572812	29568830,29569086,29569359,29572057,29572697,29573157	Gene ID= ENSG00000167543.15 TPM= 8.65 Transcript Type= NA
chr17	29568644	29573157	29568644	29573157	+	ENST00000301057.7@TP53I13	ENST00000301057.7	protein_coding	29568644,29569018,29569318,29571591,29571857,29572142,29572812	29568830,29569086,29569359,29571719,29572057,29572697,29573157	Gene ID= ENSG00000167543.15 TPM= 149.91 Transcript Type= protein_coding
chr17	29573469	29589627	29573469	29589627	-	ENST00000225394.7@GIT1	ENST00000225394.7	protein_coding	29589327,29583483,29582925,29582698,29581927,29581742,29581338,29578731,29578299,29577645,29577136,29576863,29576522,29576220,29576078,29575812,29575630,29575288,29575079,29573469	29589627,29583616,29583037,29582803,29582144,29581836,29581380,29578779,29578371,29577742,29577247,29576996,29576674,29576450,29576131,29575898,29575703,29575470,29575142,29574914	Gene ID= ENSG00000108262.15 TPM= 48.86 Transcript Type= protein_coding
chr17	29586310	29589619	29586310	29589619	-	transcript1974.chr17.nnic@NA	transcript1974.chr17.nnic	NA	29586310	29589619	Gene ID= novel_gene_chr17_1975 TPM= 4.25 Transcript Type= NA
chr17	29614978	29622917	29614978	29622917	-	transcript1983.chr17.nic@CORO6	transcript1983.chr17.nic	protein_coding	29622688,29621224,29619651,29619060,29618790,29617478,29617242,29616938,29616702,29616279,29615945,29614978	29622917,29621484,29619773,29619189,29618971,29618632,29617340,29617042,29616847,29616336,29616175,29615854	Gene ID= ENSG00000167549.18 TPM= 7.39 Transcript Type= NA
chr17	29614763	29622917	29614763	29622917	-	transcript1990.chr17.nic@CORO6	transcript1990.chr17.nic	protein_coding	29622688,29621224,29619651,29619060,29618790,29617500,29616938,29616702,29616279,29615945,29614763	29622917,29621484,29619773,29619189,29618971,29617619,29617042,29616847,29616336,29616175,29615854	Gene ID= ENSG00000167549.18 TPM= 47.57 Transcript Type= NA
chr17	29614763	29622917	29614763	29622917	-	transcript1991.chr17.nic@CORO6	transcript1991.chr17.nic	protein_coding	29622688,29621224,29619651,29619060,29618790,29617500,29616938,29616702,29616279,29615945,29614763	29622917,29621484,29619773,29619189,29618971,29618632,29617042,29616847,29616336,29616175,29615854	Gene ID= ENSG00000167549.18 TPM= 11.99 Transcript Type= NA
chr17	29614978	29622917	29614978	29622917	-	transcript1993.chr17.nic@CORO6	transcript1993.chr17.nic	protein_coding	29622688,29621224,29619651,29619060,29618790,29617242,29616938,29616702,29616279,29615945,29614978	29622917,29621484,29619773,29619189,29618971,29618632,29617042,29616847,29616336,29616175,29615854	Gene ID= ENSG00000167549.18 TPM= 8.45 Transcript Type= NA
chr17	29614763	29622917	29614763	29622917	-	transcript1998.chr17.nnic@CORO6	transcript1998.chr17.nnic	protein_coding	29622688,29621224,29619060,29618790,29617500,29616938,29616702,29616279,29615945,29614763	29622917,29621484,29619189,29618971,29617619,29617042,29616847,29616336,29616175,29615854	Gene ID= ENSG00000167549.18 TPM= 14.12 Transcript Type= NA
chr17	29614762	29622899	29614762	29622899	-	ENST00000345068.9@CORO6	ENST00000345068.9	protein_coding	29622688,29621224,29619651,29619060,29618790,29617500,29616938,29616702,29616279,29615945,29614762	29622899,29621423,29619773,29619189,29618971,29617619,29617042,29616847,29616336,29616175,29615857	Gene ID= ENSG00000167549.18 TPM= 20.49 Transcript Type= protein_coding
chr17	29614978	29617469	29614978	29617469	-	ENST00000579388.5@CORO6	ENST00000579388.5	protein_coding	29616938,29616702,29616279,29615945,29614978	29617469,29616847,29616336,29616175,29615857	Gene ID= ENSG00000167549.18 TPM= 13.02 Transcript Type= retained_intron
chr17	29614980	29617970	29614980	29617970	-	transcript2020.chr17.nnic@NA	transcript2020.chr17.nnic	NA	29614980	29617970	Gene ID= novel_gene_chr17_2021 TPM= 3.19 Transcript Type= NA
chr17	30116781	30186475	30116781	30186475	+	ENST00000247026.9@NSRP1	ENST00000247026.9	protein_coding	30116781,30118080,30172542,30178071,30179090,30180908,30184615	30116863,30118173,30172598,30178199,30179297,30181016,30186475	Gene ID= ENSG00000126653.17 TPM= 34.52 Transcript Type= protein_coding
chr17	30116820	30185744	30116820	30185744	+	ENST00000394826.8@NSRP1	ENST00000394826.8	protein_coding	30116820,30156540,30172542,30178071,30179090,30180908,30184615	30116863,30156662,30172598,30178199,30179297,30181016,30185744	Gene ID= ENSG00000126653.17 TPM= 1.06 Transcript Type= nonsense_mediated_decay
chr17	30116807	30186474	30116807	30186474	+	ENST00000612959.4@NSRP1	ENST00000612959.4	protein_coding	30116807,30172542,30178071,30179090,30180908,30184615	30116863,30172598,30178199,30179297,30181016,30186474	Gene ID= ENSG00000126653.17 TPM= 5.84 Transcript Type= protein_coding
chr17	30118038	30179264	30118038	30179264	+	ENST00000588614.1@NSRP1	ENST00000588614.1	protein_coding	30118038,30172542,30178071,30179090	30118173,30172598,30178199,30179264	Gene ID= ENSG00000126653.17 TPM= 2.12 Transcript Type= protein_coding
chr17	30117761	30120241	30117761	30120241	-	transcript2051.chr17.nnic@NA	transcript2051.chr17.nnic	NA	30117761	30120241	Gene ID= novel_gene_chr17_2052 TPM= 2.12 Transcript Type= NA
chr17	30248195	30291994	30248195	30291994	-	ENST00000261714.10@BLMH	ENST00000261714.10	protein_coding	30291807,30291311,30289373,30287806,30286814,30285388,30274042,30272741,30272561,30271271,30266885,30248195	30291994,30291508,30289482,30287947,30286902,30285480,30274197,30272899,30272628,30271388,30266954,30249168	Gene ID= ENSG00000108578.14 TPM= 23.37 Transcript Type= protein_coding
chr17	30378905	30469989	30378905	30469989	+	ENST00000225719.8@CPD	ENST00000225719.8	protein_coding	30378905,30384989,30420841,30421664,30422674,30423506,30427391,30431772,30438975,30442308,30443802,30445691,30449553,30451711,30455339,30456256,30456462,30461180,30461877,30462370,30464588	30379726,30385236,30420983,30421833,30423023,30423697,30427558,30431881,30439077,30442450,30443971,30446020,30449748,30451846,30455470,30456351,30456526,30461311,30462062,30462469,30469989	Gene ID= ENSG00000108582.11 TPM= 1.59 Transcript Type= protein_coding
chr17	30378916	30456863	30378916	30456863	+	transcript2060.chr17.nic@CPD	transcript2060.chr17.nic	protein_coding	30378916,30384989,30420841,30421664,30422674,30423506,30427391,30431772,30438975,30442308,30443802,30445691,30449553,30451711,30455339,30456256,30456462	30379726,30385236,30420983,30421833,30423023,30423697,30427558,30431881,30439077,30442450,30443971,30446020,30449748,30451846,30455470,30456351,30456863	Gene ID= ENSG00000108582.11 TPM= 2.66 Transcript Type= NA
chr17	30477377	30522805	30477377	30522805	+	ENST00000451249.6@GOSR1	ENST00000451249.6	protein_coding	30477377,30481143,30484214,30484663,30490126,30492679,30510880,30519939,30522254	30477464,30481257,30484301,30484770,30490217,30492753,30510909,30520021,30522805	Gene ID= ENSG00000108587.15 TPM= 12.75 Transcript Type= protein_coding
chr17	30477362	30527592	30477362	30527592	+	ENST00000225724.9@GOSR1	ENST00000225724.9	protein_coding	30477362,30481143,30484214,30484663,30490126,30492679,30510880,30519939,30522254	30477464,30481263,30484301,30484770,30490217,30492753,30510909,30520021,30527592	Gene ID= ENSG00000108587.15 TPM= 8.5 Transcript Type= protein_coding
chr17	30477408	30486040	30477408	30486040	+	transcript2078.chr17.nic@GOSR1	transcript2078.chr17.nic	protein_coding	30477408,30481143,30484214,30484663	30477464,30481257,30484301,30486040	Gene ID= ENSG00000108587.15 TPM= 2.12 Transcript Type= NA
chr17	30477423	30522609	30477423	30522609	+	ENST00000467337.6@GOSR1	ENST00000467337.6	protein_coding	30477423,30481143,30484214,30484663,30490126,30492679,30510880,30519939,30522254	30477486,30481257,30484301,30484770,30490217,30492753,30510909,30520021,30522609	Gene ID= ENSG00000108587.15 TPM= 15.93 Transcript Type= protein_coding
chr17	30477442	30522558	30477442	30522558	+	ENST00000414833.2@GOSR1	ENST00000414833.2	protein_coding	30477442,30481143,30484214,30484663,30490126,30492679,30510880,30519939,30522254	30477486,30481263,30484301,30484770,30490217,30492753,30510909,30520021,30522558	Gene ID= ENSG00000108587.15 TPM= 11.68 Transcript Type= protein_coding
chr17	30494909	30496279	30494909	30496279	-	transcript2087.chr17.nnic@NA	transcript2087.chr17.nnic	NA	30494909	30496279	Gene ID= novel_gene_chr17_2088 TPM= 2.12 Transcript Type= NA
chr17	30504028	30506971	30504028	30506971	-	transcript2085.chr17.nnic@NA	transcript2085.chr17.nnic	NA	30504028	30506971	Gene ID= novel_gene_chr17_2086 TPM= 2.12 Transcript Type= NA
chr17	30600428	30634323	30600428	30634323	+	transcript2090.chr17.nnic@AC005562.1	transcript2090.chr17.nnic	processed_transcript	30600428,30607552,30608430,30610889,30631755,30633098,30633994	30600916,30607665,30608562,30610942,30631979,30633390,30634323	Gene ID= ENSG00000214719.11 TPM= 4.25 Transcript Type= NA
chr17	30731950	30770050	30731950	30770050	+	transcript2104.chr17.nnic@SUZ12P1	transcript2104.chr17.nnic	transcribed_unprocessed_pseudogene	30731950,30734897,30735033,30759491,30766503,30768834,30769872	30732123,30734943,30735097,30759539,30766588,30769064,30770050	Gene ID= ENSG00000264538.6 TPM= 2.12 Transcript Type= NA
chr17	30738329	30739857	30738329	30739857	+	transcript2113.chr17.nnic@NA	transcript2113.chr17.nnic	NA	30738329	30739857	Gene ID= novel_gene_chr17_2114 TPM= 2.12 Transcript Type= NA
chr17	30782684	30824776	30782684	30824776	-	ENST00000324238.6@CRLF3	ENST00000324238.6	protein_coding	30824523,30803901,30797311,30796160,30793450,30792440,30785919,30782684	30824776,30804108,30797398,30796337,30793672,30792572,30786031,30784443	Gene ID= ENSG00000176390.11 TPM= 9.56 Transcript Type= protein_coding
chr17	30898983	30906820	30898983	30906820	-	ENST00000581216.5@TEFM	ENST00000581216.5	protein_coding	30906168,30904066,30900413,30898983	30906820,30904529,30900562,30899606	Gene ID= ENSG00000172171.10 TPM= 7.44 Transcript Type= protein_coding
chr17	30921680	30959322	30921680	30959322	+	ENST00000330889.7@ADAP2	ENST00000330889.7	protein_coding	30921680,30922940,30926827,30931889,30934185,30944907,30949287,30953288,30954478,30956241,30957835	30922108,30923070,30926918,30931968,30934297,30945053,30949370,30953350,30954555,30956469,30959322	Gene ID= ENSG00000184060.10 TPM= 3.19 Transcript Type= protein_coding
chr17	30921932	30958220	30921932	30958220	+	ENST00000580525.5@ADAP2	ENST00000580525.5	protein_coding	30921932,30922940,30926809,30931889,30934185,30944907,30949287,30953288,30954478,30956241,30957835	30922108,30923070,30926918,30931968,30934297,30945053,30949370,30953350,30954555,30956469,30958220	Gene ID= ENSG00000184060.10 TPM= 3.19 Transcript Type= protein_coding
chr17	30970201	30999911	30970201	30999911	+	ENST00000328381.9@RNF135	ENST00000328381.9	protein_coding	30970201,30984617,30987944,30997242,30998662	30971445,30984760,30988106,30997331,30999911	Gene ID= ENSG00000181481.13 TPM= 10.62 Transcript Type= protein_coding
chr17	30971023	30999909	30971023	30999909	+	ENST00000324689.8@RNF135	ENST00000324689.8	protein_coding	30971023,30984617,30997242,30998662	30971445,30984760,30997331,30999909	Gene ID= ENSG00000181481.13 TPM= 5.31 Transcript Type= protein_coding
chr17	31094977	31205915	31094977	31205915	+	transcript2129.chr17.nic@NF1	transcript2129.chr17.nic	protein_coding	31094977,31155983,31159010,31163186,31169891,31181422,31181710,31182508,31200422,31201037,31201411	31095369,31156126,31159093,31163376,31169997,31181489,31181785,31182665,31200595,31201159,31205915	Gene ID= ENSG00000196712.17 TPM= 3.19 Transcript Type= NA
chr17	31094927	31377677	31094927	31377677	+	ENST00000358273.8@NF1	ENST00000358273.8	protein_coding	31094927,31155983,31159010,31163186,31169891,31181422,31181710,31182508,31200422,31201037,31201411,31206240,31214451,31219005,31221850,31223444,31225095,31226435,31227218,31227523,31229025,31229835,31230260,31230842,31232073,31232700,31233002,31235611,31235918,31248984,31252938,31258344,31259032,31260369,31261711,31265229,31325820,31327499,31330296,31334838,31336333,31336635,31337368,31337819,31338025,31338704,31340505,31343009,31349120,31350183,31352257,31356460,31356960,31357269,31358480,31358969,31360487,31374013	31095369,31156126,31159093,31163376,31169997,31181489,31181785,31182665,31200595,31201159,31201485,31206371,31214585,31219118,31221929,31223567,31225250,31226684,31227291,31227606,31229465,31229974,31230382,31230925,31232189,31232881,31233213,31235772,31236021,31249119,31253000,31258502,31259129,31260515,31261857,31265339,31326252,31327839,31330498,31335031,31336473,31336914,31337582,31337880,31338139,31338805,31340645,31343135,31349251,31350318,31352414,31356582,31357090,31357369,31358622,31359015,31360703,31377677	Gene ID= ENSG00000196712.17 TPM= 3.19 Transcript Type= protein_coding
chr17	31303766	31314112	31303766	31314112	-	ENST00000330927.4@EVI2B	ENST00000330927.4	protein_coding	31313979,31303766	31314112,31305630	Gene ID= ENSG00000185862.6 TPM= 1.06 Transcript Type= protein_coding
chr17	31851871	31859074	31851871	31859074	-	ENST00000378634.6@COPRS	ENST00000378634.6	protein_coding	31858758,31856799,31852812,31851871	31859074,31856865,31853030,31852308	Gene ID= ENSG00000172301.10 TPM= 6.9 Transcript Type= protein_coding
chr17	31851864	31859337	31851864	31859337	-	ENST00000302362.10@COPRS	ENST00000302362.10	protein_coding	31859101,31856799,31852812,31851864	31859337,31856865,31853030,31852308	Gene ID= ENSG00000172301.10 TPM= 85.5 Transcript Type= protein_coding
chr17	31863173	31901760	31863173	31901760	-	transcript2137.chr17.nic@UTP6	transcript2137.chr17.nic	protein_coding	31901536,31899646,31894970,31894645,31892747,31892260,31889285,31887236,31885980,31884424,31880573,31878702,31878250,31875234,31873673,31873378,31868046,31866655,31865366,31863173	31901760,31899730,31895011,31894737,31892794,31892323,31889403,31887313,31886061,31884505,31880754,31878781,31878327,31875413,31873753,31873487,31868112,31866715,31865438,31863516	Gene ID= ENSG00000108651.9 TPM= 7.44 Transcript Type= NA
chr17	31860899	31901765	31860899	31901765	-	ENST00000261708.8@UTP6	ENST00000261708.8	protein_coding	31901536,31899646,31894970,31894645,31892747,31892260,31889285,31887236,31885980,31884424,31880573,31878702,31878250,31875234,31873673,31873378,31868046,31865366,31860899	31901765,31899730,31895011,31894737,31892794,31892323,31889403,31887313,31886061,31884505,31880754,31878781,31878327,31875413,31873753,31873487,31868112,31865438,31863516	Gene ID= ENSG00000108651.9 TPM= 47.8 Transcript Type= protein_coding
chr17	31863173	31901760	31863173	31901760	-	transcript2140.chr17.nic@UTP6	transcript2140.chr17.nic	protein_coding	31901536,31899646,31894970,31894645,31892747,31892260,31889285,31887236,31885980,31884424,31878250,31875234,31873673,31873378,31868046,31865366,31863173	31901760,31899730,31895011,31894737,31892794,31892323,31889403,31887313,31886061,31884505,31880754,31875413,31873753,31873487,31868112,31865438,31863516	Gene ID= ENSG00000108651.9 TPM= 3.19 Transcript Type= NA
chr17	31936996	31997687	31936996	31997687	+	transcript2149.chr17.nic@SUZ12	transcript2149.chr17.nic	protein_coding	31936996,31940286,31940422,31947617,31966147,31973146,31975482,31976521,31982999,31988320,31993242,31993865,31994564,31995564,31996798	31937520,31940332,31940486,31947685,31966196,31973231,31975713,31976614,31983104,31988497,31993333,31994008,31994721,31995762,31997687	Gene ID= ENSG00000178691.10 TPM= 2.12 Transcript Type= NA
chr17	31937018	32001045	31937018	32001045	+	ENST00000322652.9@SUZ12	ENST00000322652.9	protein_coding	31937018,31940286,31940422,31947617,31966147,31973146,31975482,31976521,31982999,31988320,31993242,31993865,31994564,31995564,31996798,31998658	31937520,31940332,31940486,31947685,31966196,31973231,31975713,31976614,31983104,31988497,31993333,31994008,31994721,31995762,31996877,32001045	Gene ID= ENSG00000178691.10 TPM= 4.25 Transcript Type= protein_coding
chr17	31937067	32000649	31937067	32000649	+	ENST00000580398.1@SUZ12	ENST00000580398.1	protein_coding	31937067,31940286,31940422,31966147,31973146,31975482,31976521,31982999,31988320,31993242,31993865,31994564,31995564,31996798,31998658	31937520,31940332,31940486,31966196,31973231,31975713,31976614,31983104,31988497,31993333,31994008,31994721,31995762,31996877,32000649	Gene ID= ENSG00000178691.10 TPM= 3.19 Transcript Type= protein_coding
chr17	32142451	32211294	32142451	32211294	+	transcript2163.chr17.nic@RHOT1	transcript2163.chr17.nic	protein_coding	32142451,32171043,32173831,32175319,32175962,32176161,32182757,32183171,32192201,32193136,32193987,32198947,32199405,32200956,32202770,32203890,32206910,32208107,32211116	32142729,32171101,32173912,32175362,32176015,32176213,32182865,32183272,32192299,32193244,32194107,32199031,32199550,32201056,32202900,32203973,32207029,32208309,32211294	Gene ID= ENSG00000126858.16 TPM= 3.19 Transcript Type= NA
chr17	32142454	32225770	32142454	32225770	+	ENST00000333942.10@RHOT1	ENST00000333942.10	protein_coding	32142454,32171043,32173831,32175319,32175962,32176161,32182757,32183171,32192201,32193136,32193987,32198947,32199405,32200956,32202770,32203890,32206910,32208107,32224616	32142729,32171101,32173912,32175362,32176015,32176213,32182865,32183272,32192299,32193244,32194107,32199031,32199550,32201056,32202900,32203973,32207029,32208309,32225770	Gene ID= ENSG00000126858.16 TPM= 9.56 Transcript Type= protein_coding
chr17	32142541	32173555	32142541	32173555	+	transcript2171.chr17.nic@RHOT1	transcript2171.chr17.nic	protein_coding	32142541,32171043	32142729,32173555	Gene ID= ENSG00000126858.16 TPM= 2.12 Transcript Type= NA
chr17	32151657	32154148	32151657	32154148	+	transcript2176.chr17.nnic@NA	transcript2176.chr17.nnic	NA	32151657	32154148	Gene ID= novel_gene_chr17_2177 TPM= 2.12 Transcript Type= NA
chr17	32179505	32180645	32179505	32180645	+	transcript2174.chr17.nnic@NA	transcript2174.chr17.nnic	NA	32179505	32180645	Gene ID= novel_gene_chr17_2175 TPM= 2.12 Transcript Type= NA
chr17	32212675	32213679	32212675	32213679	-	transcript2178.chr17.nnic@NA	transcript2178.chr17.nnic	NA	32212675	32213679	Gene ID= novel_gene_chr17_2179 TPM= 2.12 Transcript Type= NA
chr17	32328445	32342199	32328445	32342199	-	transcript2186.chr17.nnic@C17orf75	transcript2186.chr17.nnic	protein_coding	32342000,32341204,32339813,32338208,32337897,32335323,32334775,32334469,32333417,32329480,32328445	32342199,32341284,32339938,32338351,32337954,32335442,32334839,32334605,32333520,32331978,32328704	Gene ID= ENSG00000108666.9 TPM= 2.12 Transcript Type= NA
chr17	32328443	32342209	32328443	32342209	-	ENST00000225805.8@C17orf75	ENST00000225805.8	protein_coding	32342000,32341204,32339813,32338210,32337897,32335323,32334775,32334469,32333417,32328443	32342209,32341284,32339938,32338351,32337956,32335442,32334839,32334605,32333520,32331978	Gene ID= ENSG00000108666.9 TPM= 1.06 Transcript Type= protein_coding
chr17	32331596	32341914	32331596	32341914	-	transcript2188.chr17.nic@C17orf75	transcript2188.chr17.nic	protein_coding	32341801,32341204,32339813,32338208,32337897,32335323,32334775,32334469,32333417,32331596	32341914,32341284,32339938,32338351,32337954,32335442,32334839,32334605,32333520,32331978	Gene ID= ENSG00000108666.9 TPM= 4.25 Transcript Type= NA
chr17	32331596	32341914	32331596	32341914	-	transcript2189.chr17.nic@C17orf75	transcript2189.chr17.nic	protein_coding	32341863,32341204,32339813,32338208,32337897,32335323,32334775,32334469,32333417,32331596	32341914,32341284,32339938,32338351,32337954,32335442,32334839,32334605,32333520,32331978	Gene ID= ENSG00000108666.9 TPM= 2.12 Transcript Type= NA
chr17	32350117	32381886	32350117	32381886	+	ENST00000394670.8@ZNF207	ENST00000394670.8	protein_coding	32350117,32351786,32358503,32360598,32360892,32361468,32362914,32365330,32366665,32367772,32369295,32369599	32350326,32351912,32358641,32360765,32360967,32361515,32362984,32365487,32366757,32368014,32369454,32381886	Gene ID= ENSG00000010244.18 TPM= 11.15 Transcript Type= protein_coding
chr17	32350138	32370343	32350138	32370343	+	ENST00000394673.6@ZNF207	ENST00000394673.6	protein_coding	32350138,32351786,32358503,32360598,32360892,32361468,32362914,32365330,32367772,32369295,32369599	32350326,32351912,32358641,32360765,32360967,32361515,32362984,32365487,32368014,32369454,32370343	Gene ID= ENSG00000010244.18 TPM= 6.9 Transcript Type= protein_coding
chr17	32388194	32391223	32388194	32391223	-	transcript2218.chr17.nnic@NA	transcript2218.chr17.nnic	NA	32388194	32391223	Gene ID= novel_gene_chr17_2219 TPM= 5.31 Transcript Type= NA
chr17	32444261	32483318	32444261	32483318	+	ENST00000261712.7@PSMD11	ENST00000261712.7	protein_coding	32444261,32446945,32454495,32464049,32464521,32468999,32473801,32474764,32477521,32479251,32479851,32480146,32480489,32480753	32444614,32447046,32454619,32464120,32464578,32469193,32473945,32474824,32477583,32479376,32479886,32480197,32480631,32483318	Gene ID= ENSG00000108671.9 TPM= 15.93 Transcript Type= protein_coding
chr17	32486619	32491256	32486619	32491256	+	ENST00000313401.3@CDK5R1	ENST00000313401.3	protein_coding	32486619,32487476	32487162,32491256	Gene ID= ENSG00000176749.8 TPM= 5.31 Transcript Type= protein_coding
chr17	32492522	32877177	32492522	32877177	-	ENST00000318217.9@MYO1D	ENST00000318217.9	protein_coding	32876778,32780576,32778480,32775864,32772789,32771125,32767636,32764878,32760482,32760290,32755492,32748936,32745211,32738253,32721023,32711988,32659115,32654477,32653843,32638722,32605087,32492522	32877177,32780784,32778573,32776029,32772842,32771220,32767752,32765081,32760627,32760404,32755662,32749006,32745285,32738385,32721189,32712195,32659338,32654621,32653947,32638835,32605241,32494915	Gene ID= ENSG00000176658.16 TPM= 3.19 Transcript Type= protein_coding
chr17	32927937	32944315	32927937	32944315	+	ENST00000579849.5@TMEM98	ENST00000579849.5	protein_coding	32927937,32931327,32931475,32933174,32934291,32936332,32939477,32940786	32928237,32931402,32931659,32933305,32934324,32936447,32939536,32944315	Gene ID= ENSG00000006042.11 TPM= 15.93 Transcript Type= protein_coding
chr17	32927910	32941613	32927910	32941613	+	ENST00000394642.7@TMEM98	ENST00000394642.7	protein_coding	32927910,32931475,32933174,32934291,32936332,32939477,32940786	32928237,32931659,32933305,32934324,32936447,32939536,32941613	Gene ID= ENSG00000006042.11 TPM= 4.25 Transcript Type= protein_coding
chr17	34255285	34257203	34255285	34257203	+	ENST00000225831.4@CCL2	ENST00000225831.4	protein_coding	34255285,34256222,34256722	34255425,34256339,34257203	Gene ID= ENSG00000108691.9 TPM= 32.93 Transcript Type= protein_coding
chr17	34285668	34288334	34285668	34288334	+	ENST00000305869.3@CCL11	ENST00000305869.3	protein_coding	34285668,34287096,34287585	34285884,34287207,34288334	Gene ID= ENSG00000172156.3 TPM= 1.06 Transcript Type= protein_coding
chr17	34319036	34321402	34319036	34321402	+	ENST00000394620.1@CCL8	ENST00000394620.1	protein_coding	34319036,34320269,34320802	34319577,34320386,34321402	Gene ID= ENSG00000108700.4 TPM= 2.12 Transcript Type= protein_coding
chr17	34961530	34963775	34961530	34963775	+	ENST00000361952.4@ZNF830	ENST00000361952.4	protein_coding	34961530	34963775	Gene ID= ENSG00000198783.5 TPM= 1.06 Transcript Type= protein_coding
chr17	34980494	35009743	34980494	35009743	+	ENST00000378526.8@LIG3	ENST00000378526.8	protein_coding	34980494,34983002,34985988,34989466,34990963,34991671,34991958,34992524,34994276,34996064,34996574,34997738,34998219,34998604,34999307,34999782,35001257,35001909,35002668,35004273	34980622,34983552,34986131,34989663,34991114,34991837,34992035,34992692,34994431,34996195,34996653,34997825,34998296,34998727,34999449,34999856,35001403,35002104,35002789,35009743	Gene ID= ENSG00000005156.11 TPM= 4.25 Transcript Type= protein_coding
chr17	35005990	35089319	35005990	35089319	-	ENST00000315249.11@RFFL	ENST00000315249.11	protein_coding	35089105,35026374,35021371,35017523,35016370,35014740,35005990	35089319,35026561,35021781,35017606,35016580,35014763,35012149	Gene ID= ENSG00000092871.16 TPM= 4.25 Transcript Type= protein_coding
chr17	35092208	35119869	35092208	35119869	-	ENST00000345365.10@RAD51D	ENST00000345365.10	protein_coding	35119532,35119111,35118501,35107366,35106988,35106386,35103454,35103254,35101201,35092208	35119869,35119172,35118619,35107447,35107122,35106481,35103544,35103324,35101365,35101036	Gene ID= ENSG00000185379.20 TPM= 2.12 Transcript Type= protein_coding
chr17	35100383	35119745	35100383	35119745	-	ENST00000335858.11@RAD51D	ENST00000335858.11	protein_coding	35119532,35119111,35106386,35103454,35103254,35101201,35100383	35119745,35119172,35106481,35103544,35103324,35101365,35101036	Gene ID= ENSG00000185379.20 TPM= 1.06 Transcript Type= protein_coding
chr17	35131347	35142315	35131347	35142315	-	ENST00000442241.8@NLE1	ENST00000442241.8	protein_coding	35142258,35141979,35139849,35139235,35137814,35137543,35137001,35136362,35136169,35135249,35133339,35133171,35131347	35142315,35142122,35140066,35139314,35137890,35137640,35137193,35136497,35136215,35135451,35133498,35133241,35132449	Gene ID= ENSG00000073536.17 TPM= 2.12 Transcript Type= protein_coding
chr17	35147814	35186963	35147814	35186963	+	transcript2275.chr17.nnic@UNC45B	transcript2275.chr17.nnic	protein_coding	35147814,35148264,35148973,35150048,35152893,35154574,35155296,35163995,35168061,35169837,35170114,35171322,35174242,35175968,35177017,35177495,35180559,35183427,35186299	35147910,35148431,35149009,35150223,35152982,35154741,35155464,35164166,35168361,35169931,35170255,35171462,35174369,35176034,35177130,35177610,35180676,35183582,35186963	Gene ID= ENSG00000141161.11 TPM= 13.28 Transcript Type= NA
chr17	35147548	35162122	35147548	35162122	+	transcript2294.chr17.nic@UNC45B	transcript2294.chr17.nic	protein_coding	35147548,35148264,35148973,35150048,35152893,35154574,35155296,35159375	35147910,35148431,35149009,35150223,35152982,35154741,35155464,35162122	Gene ID= ENSG00000141161.11 TPM= 11.68 Transcript Type= NA
chr17	35147841	35189337	35147841	35189337	+	ENST00000394570.6@UNC45B	ENST00000394570.6	protein_coding	35147841,35148264,35148973,35150048,35152893,35154574,35155296,35159375,35163995,35168061,35169837,35170114,35171322,35174242,35175968,35177017,35177495,35180559,35183427,35186299	35147910,35148431,35149009,35150223,35152982,35154741,35155464,35159545,35164166,35168361,35169931,35170255,35171462,35174369,35176034,35177130,35177610,35180676,35183582,35189337	Gene ID= ENSG00000141161.11 TPM= 11.11 Transcript Type= protein_coding
chr17	35243036	35273655	35243036	35273655	+	ENST00000299977.8@SLFN5	ENST00000299977.8	protein_coding	35243036,35258651,35260971,35264183,35265072	35243143,35259702,35261096,35264903,35273655	Gene ID= ENSG00000166750.9 TPM= 1.06 Transcript Type= protein_coding
chr17	35243067	35245800	35243067	35245800	+	transcript2300.chr17.nnic@NA	transcript2300.chr17.nnic	NA	35243067	35245800	Gene ID= novel_gene_chr17_2301 TPM= 3.19 Transcript Type= NA
chr17	35313511	35324906	35313511	35324906	+	transcript2305.chr17.nnic@AC022706.1	transcript2305.chr17.nnic	lincRNA	35313511,35323148,35324654	35313706,35323343,35324906	Gene ID= ENSG00000267364.1 TPM= 3.19 Transcript Type= NA
chr17	35350305	35373620	35350305	35373620	-	ENST00000394566.5@SLFN11	ENST00000394566.5	protein_coding	35373582,35367603,35366947,35362739,35360243,35353336,35350305	35373620,35367700,35367063,35363826,35360371,35354059,35353139	Gene ID= ENSG00000172716.16 TPM= 2.12 Transcript Type= protein_coding
chr17	35587429	35724086	35587429	35724086	+	transcript2322.chr17.nic@AP2B1	transcript2322.chr17.nic	protein_coding	35587429,35594008,35598230,35605705,35608142,35624397,35626621,35627385,35627631,35636341,35639595,35641877,35650530,35657599,35670857,35671754,35674176,35682695,35709224,35710234,35717195,35723625	35587597,35594067,35598335,35605840,35608387,35624587,35626842,35627505,35627726,35636456,35639760,35641975,35650789,35657791,35670898,35671900,35674321,35682824,35709308,35710320,35717349,35724086	Gene ID= ENSG00000006125.17 TPM= 26.55 Transcript Type= NA
chr17	35587263	35660120	35587263	35660120	+	transcript2324.chr17.nic@AP2B1	transcript2324.chr17.nic	protein_coding	35587263,35594008,35598230,35605705,35608142,35624397,35626621,35627385,35627631,35636341,35639595,35641877,35650530,35657599,35659764	35587428,35594067,35598335,35605840,35608387,35624587,35626842,35627505,35627726,35636456,35639760,35641975,35650789,35657791,35660120	Gene ID= ENSG00000006125.17 TPM= 6.9 Transcript Type= NA
chr17	35586899	35657791	35586899	35657791	+	ENST00000616784.4@AP2B1	ENST00000616784.4	protein_coding	35586899,35594008,35598230,35605705,35608142,35624397,35626621,35627385,35627631,35636341,35639595,35641877,35650530,35657599	35587428,35594067,35598335,35605840,35608387,35624587,35626842,35627505,35627726,35636456,35639760,35641975,35650789,35657791	Gene ID= ENSG00000006125.17 TPM= 5.84 Transcript Type= protein_coding
chr17	35731636	35743521	35731636	35743521	+	transcript2330.chr17.nnic@RASL10B	transcript2330.chr17.nnic	protein_coding	35731636,35735038,35740409,35741035,35741805	35731878,35735400,35740533,35741131,35743521	Gene ID= ENSG00000270885.1 TPM= 12.21 Transcript Type= NA
chr17	35731649	35743521	35731649	35743521	+	ENST00000603017.1@RASL10B	ENST00000603017.1	protein_coding	35731649,35735038,35740409,35741035	35731878,35735400,35740533,35743521	Gene ID= ENSG00000270885.1 TPM= 61.07 Transcript Type= protein_coding
chr17	35778505	35795707	35778505	35795707	-	ENST00000612672.1@MMP28	ENST00000612672.1	protein_coding	35795267,35779244,35778505	35795707,35779323,35779075	Gene ID= ENSG00000271447.5 TPM= 2.12 Transcript Type= protein_coding
chr17	35824243	35825047	35824243	35825047	-	transcript2338.chr17.nnic@NA	transcript2338.chr17.nnic	NA	35824243	35825047	Gene ID= novel_gene_chr17_2339 TPM= 2.12 Transcript Type= NA
chr17	35871491	35880508	35871491	35880508	-	ENST00000603197.5@CCL5	ENST00000603197.5	protein_coding	35880230,35878528,35871491	35880508,35878639,35872464	Gene ID= ENSG00000271503.5 TPM= 2.12 Transcript Type= protein_coding
chr17	36088256	36090141	36088256	36090141	-	ENST00000613922.1@CCL3	ENST00000613922.1	protein_coding	36089986,36089183,36088256	36090141,36089297,36088762	Gene ID= ENSG00000277632.1 TPM= 2.12 Transcript Type= protein_coding
chr17	36486629	36495823	36486629	36495823	+	ENST00000619730.4@ZNHIT3	ENST00000619730.4	protein_coding	36486629,36492813,36493926,36495223	36486785,36492899,36494006,36495823	Gene ID= ENSG00000273611.4 TPM= 3.19 Transcript Type= protein_coding
chr17	36486635	36495822	36486635	36495822	+	ENST00000617429.4@ZNHIT3	ENST00000617429.4	protein_coding	36486635,36486935,36492813,36493926,36495223	36486785,36486966,36492899,36494006,36495822	Gene ID= ENSG00000273611.4 TPM= 8.5 Transcript Type= protein_coding
chr17	36495640	36535457	36495640	36535457	-	ENST00000621550.4@MYO19	ENST00000621550.4	protein_coding	36534761,36533953,36532527,36528064,36527551,36525228,36515858,36514446,36513629,36512874,36512658,36511365,36510746,36509062,36507803,36507399,36506963,36498266,36495640	36535457,36534104,36532681,36528202,36527699,36525341,36515990,36514548,36513725,36513505,36512779,36511455,36510917,36509135,36507924,36507512,36507139,36498554,36496406	Gene ID= ENSG00000278259.4 TPM= 1.06 Transcript Type= nonsense_mediated_decay
chr17	36535555	36539310	36535555	36539310	+	ENST00000620233.1@PIGW	ENST00000620233.1	protein_coding	36535555,36537094	36535601,36539310	Gene ID= ENSG00000277161.1 TPM= 2.12 Transcript Type= protein_coding
chr17	36545483	36589848	36545483	36589848	+	transcript2360.chr17.nic@GGNBP2	transcript2360.chr17.nic	protein_coding	36545483,36554820,36557083,36560773,36567663,36577983,36579245,36581344,36585300,36585840,36586050,36586997,36589208	36545817,36554900,36557336,36560871,36567776,36578186,36579419,36581538,36585450,36585965,36586198,36587245,36589848	Gene ID= ENSG00000278311.4 TPM= 3.19 Transcript Type= NA
chr17	36544882	36586153	36544882	36586153	+	transcript2361.chr17.nic@GGNBP2	transcript2361.chr17.nic	protein_coding	36544882,36545619,36554820,36557083,36560773,36567663,36577983,36579245,36581344,36585300,36585840,36586050	36545097,36545817,36554900,36557336,36560871,36567776,36578186,36579419,36581538,36585450,36585965,36586153	Gene ID= ENSG00000278311.4 TPM= 43.9 Transcript Type= NA
chr17	36544888	36589848	36544888	36589848	+	ENST00000613102.4@GGNBP2	ENST00000613102.4	protein_coding	36544888,36545619,36554820,36557083,36560773,36567663,36577983,36579245,36581344,36585300,36585840,36586050,36586997,36589208	36545097,36545817,36554900,36557336,36560871,36567776,36578186,36579419,36581538,36585450,36585965,36586198,36587245,36589848	Gene ID= ENSG00000278311.4 TPM= 20.53 Transcript Type= protein_coding
chr17	36591798	36600806	36591798	36600806	+	ENST00000618403.4@DHRS11	ENST00000618403.4	protein_coding	36591798,36594971,36598163,36598921,36599671,36599972,36600162	36592156,36595180,36598257,36599050,36599763,36600037,36600806	Gene ID= ENSG00000278535.4 TPM= 31.15 Transcript Type= protein_coding
chr17	36591869	36600804	36591869	36600804	+	transcript2367.chr17.nic@DHRS11	transcript2367.chr17.nic	protein_coding	36591869,36594971,36598163,36598921,36599972,36600162	36592156,36595180,36598257,36599050,36600037,36600804	Gene ID= ENSG00000278535.4 TPM= 4.6 Transcript Type= NA
chr17	36591815	36600804	36591815	36600804	+	transcript2368.chr17.nnic@DHRS11	transcript2368.chr17.nnic	protein_coding	36591815,36598163,36598921,36599671,36599972,36600162	36592156,36598257,36599050,36599763,36600037,36600804	Gene ID= ENSG00000278535.4 TPM= 3.54 Transcript Type= NA
chr17	36596163	36600804	36596163	36600804	+	transcript2373.chr17.nic@DHRS11	transcript2373.chr17.nic	protein_coding	36596163,36598921,36599972,36600162	36598257,36599763,36600037,36600804	Gene ID= ENSG00000278535.4 TPM= 2.12 Transcript Type= NA
chr17	36948875	37056871	36948875	37056871	+	ENST00000619387.4@AATF	ENST00000619387.4	protein_coding	36948875,36950214,36952886,36953770,36986617,36988519,36989247,36990774,37019005,37020934,37031614,37056601	36949216,36950405,36953296,36953907,36986731,36988720,36989411,36990857,37019072,37021014,37031685,37056871	Gene ID= ENSG00000275700.4 TPM= 55.76 Transcript Type= protein_coding
chr17	36948941	37056870	36948941	37056870	+	transcript2379.chr17.nic@AATF	transcript2379.chr17.nic	protein_coding	36948941,36950214,36952886,36953770,36986617,36988519,36989247,36990774,37019005,37020934,37056601	36949216,36950405,36953296,36953907,36986731,36988720,36989411,36990857,37019072,37021014,37056870	Gene ID= ENSG00000275700.4 TPM= 4.78 Transcript Type= NA
chr17	37328645	37359278	37328645	37359278	-	transcript2384.chr17.nic@ACACA	transcript2384.chr17.nic	protein_coding	37358999,37339804,37330173,37328645	37359278,37339850,37330425,37328986	Gene ID= ENSG00000278540.4 TPM= 2.12 Transcript Type= NA
chr17	37406884	37478263	37406884	37478263	+	transcript2388.chr17.nnic@TADA2A	transcript2388.chr17.nnic	protein_coding	37406884,37411269,37423509,37426950,37437738,37440505,37442564,37444696,37458524,37462078,37465431,37467454,37470400,37471094,37474556,37476797,37478026	37406949,37411390,37423615,37427009,37437829,37440662,37442652,37444768,37458587,37462121,37465541,37467525,37470532,37471137,37474629,37477559,37478263	Gene ID= ENSG00000276234.4 TPM= 2.12 Transcript Type= NA
chr17	37406874	37479730	37406874	37479730	+	ENST00000615182.4@TADA2A	ENST00000615182.4	protein_coding	37406874,37411269,37423509,37426950,37437738,37440505,37442564,37444696,37458524,37462078,37465431,37467454,37470400,37471094,37474556,37476797	37406949,37411390,37423615,37427009,37437829,37440662,37442652,37444768,37458587,37462121,37465541,37467525,37470532,37471137,37474629,37479730	Gene ID= ENSG00000276234.4 TPM= 1.06 Transcript Type= protein_coding
chr17	37489831	37513501	37489831	37513501	+	ENST00000617516.4@DUSP14	ENST00000617516.4	protein_coding	37489831,37510677,37512181	37489958,37510764,37513501	Gene ID= ENSG00000276023.4 TPM= 38.24 Transcript Type= protein_coding
chr17	37550505	37609422	37550505	37609422	-	transcript2399.chr17.nic@SYNRG	transcript2399.chr17.nic	protein_coding	37609279,37600363,37596223,37586419,37585325,37584648,37579132,37577380,37576341,37571791,37570637,37568791,37561471,37561195,37550505	37609422,37600403,37596344,37586549,37585430,37584759,37579434,37577613,37576418,37571987,37570885,37568924,37561589,37561257,37554059	Gene ID= ENSG00000275066.4 TPM= 13.28 Transcript Type= NA
chr17	37550505	37609422	37550505	37609422	-	transcript2400.chr17.nic@SYNRG	transcript2400.chr17.nic	protein_coding	37609279,37600363,37596223,37586419,37585325,37584648,37577380,37576341,37571791,37570637,37568791,37561471,37561195,37550505	37609422,37600403,37596344,37586549,37585430,37584759,37577613,37576418,37571987,37570885,37568924,37561589,37561257,37554059	Gene ID= ENSG00000275066.4 TPM= 10.09 Transcript Type= NA
chr17	37514797	37609496	37514797	37609496	-	ENST00000612223.4@SYNRG	ENST00000612223.4	protein_coding	37609279,37600363,37596223,37586419,37585325,37584648,37577380,37576341,37571791,37570637,37568791,37561471,37561195,37553115,37541972,37540380,37539192,37538324,37535979,37520538,37520179,37514797	37609496,37600403,37596344,37586549,37585430,37584759,37577613,37576418,37571987,37570885,37568924,37561589,37561257,37554059,37542565,37540543,37539245,37538420,37536127,37520648,37520214,37519071	Gene ID= ENSG00000275066.4 TPM= 2.12 Transcript Type= protein_coding
chr17	37604879	37607978	37604879	37607978	+	transcript2410.chr17.nnic@NA	transcript2410.chr17.nnic	NA	37604879	37607978	Gene ID= novel_gene_chr17_2411 TPM= 5.31 Transcript Type= NA
chr17	37609778	37643464	37609778	37643464	-	ENST00000617633.4@DDX52	ENST00000617633.4	protein_coding	37643334,37642110,37633288,37632113,37630030,37628561,37626788,37625895,37624344,37621398,37621127,37620873,37619768,37618292,37609778	37643464,37642308,37633418,37632298,37630173,37628672,37626860,37626098,37624434,37621520,37621277,37620948,37619839,37618384,37614353	Gene ID= ENSG00000278053.4 TPM= 1.06 Transcript Type= protein_coding
chr17	37978155	37988335	37978155	37988335	-	transcript2420.chr17.nic@TBC1D3L	transcript2420.chr17.nic	protein_coding	37985878,37985315,37984764,37984325,37983028,37982364,37981556,37981106,37980543,37980020,37978155	37988335,37985395,37984871,37984434,37983076,37982484,37981650,37981171,37980642,37980172,37979038	Gene ID= ENSG00000274512.5 TPM= 5.31 Transcript Type= NA
chr17	38195740	38257277	38195740	38257277	-	transcript2427.chr17.nnic@AC244154.1	transcript2427.chr17.nnic	unprocessed_pseudogene	38256898,38242201,38219046,38208995,38205635,38202781,38202238,38202072,38201105,38197546,38196367,38195740	38257277,38242285,38219123,38209116,38205742,38202981,38202334,38202105,38201219,38197710,38196471,38195940	Gene ID= ENSG00000274487.1 TPM= 10.62 Transcript Type= NA
chr17	38297023	38323218	38297023	38323218	+	ENST00000613675.4@MRPL45	ENST00000613675.4	protein_coding	38297023,38298449,38299351,38306533,38318687,38320618,38322126,38322509	38297249,38298626,38299468,38306631,38318735,38320767,38322299,38323218	Gene ID= ENSG00000278845.4 TPM= 58.95 Transcript Type= protein_coding
chr17	38297023	38323217	38297023	38323217	+	ENST00000619548.1@MRPL45	ENST00000619548.1	protein_coding	38297023,38298449,38299351,38306533,38318687,38322126,38322509	38297249,38298626,38299468,38306631,38318735,38322299,38323217	Gene ID= ENSG00000278845.4 TPM= 3.72 Transcript Type= protein_coding
chr17	38437210	38439391	38437210	38439391	-	transcript2444.chr17.nnic@NA	transcript2444.chr17.nnic	NA	38437210	38439391	Gene ID= novel_gene_chr17_2445 TPM= 2.12 Transcript Type= NA
chr17	38439779	38442282	38439779	38442282	-	transcript2442.chr17.nnic@NA	transcript2442.chr17.nnic	NA	38439779	38442282	Gene ID= novel_gene_chr17_2443 TPM= 5.31 Transcript Type= NA
chr17	38462248	38466239	38462248	38466239	-	transcript2440.chr17.nnic@NA	transcript2440.chr17.nnic	NA	38463123,38462248	38466239,38462946	Gene ID= novel_gene_chr17_2441 TPM= 9.03 Transcript Type= NA
chr17	38462248	38466253	38462248	38466253	-	transcript2438.chr17.nnic@NA	transcript2438.chr17.nnic	NA	38463328,38463123,38462248	38466253,38463196,38462946	Gene ID= novel_gene_chr17_2439 TPM= 14.34 Transcript Type= NA
chr17	38504980	38507098	38504980	38507098	-	transcript2446.chr17.nnic@NA	transcript2446.chr17.nnic	NA	38504980	38507098	Gene ID= novel_gene_chr17_2447 TPM= 21.24 Transcript Type= NA
chr17	38671703	38675421	38671703	38675421	-	ENST00000621654.1@EPOP	ENST00000621654.1	protein_coding	38671703	38675421	Gene ID= ENSG00000273604.1 TPM= 5.31 Transcript Type= protein_coding
chr17	38701921	38703535	38701921	38703535	+	transcript2450.chr17.nnic@NA	transcript2450.chr17.nnic	NA	38701921	38703535	Gene ID= novel_gene_chr17_2451 TPM= 12.75 Transcript Type= NA
chr17	38725777	38727643	38725777	38727643	+	transcript2463.chr17.nnic@NA	transcript2463.chr17.nnic	NA	38725777	38727643	Gene ID= novel_gene_chr17_2464 TPM= 7.44 Transcript Type= NA
chr17	38730359	38735044	38730359	38735044	+	ENST00000619858.1@CISD3	ENST00000619858.1	protein_coding	38730359,38731320,38733276	38730795,38731439,38735044	Gene ID= ENSG00000277972.1 TPM= 4.25 Transcript Type= processed_transcript
chr17	38735044	38747967	38735044	38747967	-	transcript2454.chr17.nic@PCGF2	transcript2454.chr17.nic	protein_coding	38747879,38740291,38739586,38739198,38739068,38738753,38738541,38738353,38736090,38735044	38747967,38740442,38739682,38739253,38739118,38738861,38738595,38738448,38736170,38735600	Gene ID= ENSG00000277258.4 TPM= 10.62 Transcript Type= NA
chr17	38752719	38762466	38752719	38762466	+	transcript2481.chr17.nic@PSMB3	transcript2481.chr17.nic	protein_coding	38752719,38753150,38755883,38760431,38762411	38752829,38753334,38755990,38760608,38762466	Gene ID= ENSG00000277791.4 TPM= 3.19 Transcript Type= NA
chr17	38752736	38764231	38752736	38764231	+	ENST00000619426.4@PSMB3	ENST00000619426.4	protein_coding	38752736,38753150,38755883,38760431,38762411,38764119	38752829,38753334,38755990,38760608,38762505,38764231	Gene ID= ENSG00000277791.4 TPM= 109.4 Transcript Type= protein_coding
chr17	38752773	38764225	38752773	38764225	+	ENST00000620309.4@PSMB3	ENST00000620309.4	protein_coding	38752773,38753150,38755883,38762411,38764119	38752829,38753334,38755990,38762505,38764225	Gene ID= ENSG00000277791.4 TPM= 3.19 Transcript Type= nonsense_mediated_decay
chr17	38765689	38799905	38765689	38799905	-	ENST00000619039.4@PIP4K2B	ENST00000619039.4	protein_coding	38799266,38786823,38784243,38780452,38779383,38778334,38777687,38771014,38770436,38765689	38799905,38786920,38784339,38780604,38779529,38778372,38777800,38771272,38770539,38769771	Gene ID= ENSG00000276293.4 TPM= 40.36 Transcript Type= protein_coding
chr17	38775977	38799544	38775977	38799544	-	transcript2477.chr17.nnic@PIP4K2B	transcript2477.chr17.nnic	protein_coding	38799266,38786823,38784243,38780452,38779383,38778334,38777687,38775977	38799544,38786920,38784339,38780604,38779529,38778372,38777800,38776307	Gene ID= ENSG00000276293.4 TPM= 2.12 Transcript Type= NA
chr17	38800434	38825481	38800434	38825481	-	ENST00000614790.4@CWC25	ENST00000614790.4	protein_coding	38825166,38820901,38814861,38812795,38810468,38809702,38806765,38806297,38802700,38800434	38825481,38821073,38815097,38812864,38810595,38809765,38806976,38806395,38802861,38802206	Gene ID= ENSG00000273559.4 TPM= 8.5 Transcript Type= protein_coding
chr17	38847867	38853843	38847867	38853843	-	ENST00000479035.6@RPL23	ENST00000479035.6	protein_coding	38853698,38853022,38852604,38850362,38847867	38853843,38853105,38852732,38850475,38850214	Gene ID= ENSG00000125691.12 TPM= 46.74 Transcript Type= protein_coding
chr17	38847865	38853722	38847865	38853722	-	ENST00000394332.5@RPL23	ENST00000394332.5	protein_coding	38853698,38853022,38852604,38850362,38850117,38847865	38853722,38853105,38852732,38850475,38850214,38848039	Gene ID= ENSG00000125691.12 TPM= 2.12 Transcript Type= protein_coding
chr17	38850081	38853740	38850081	38853740	-	ENST00000584912.5@RPL23	ENST00000584912.5	protein_coding	38853698,38853022,38850081	38853740,38853105,38852732	Gene ID= ENSG00000125691.12 TPM= 4.25 Transcript Type= retained_intron
chr17	38910735	38911937	38910735	38911937	-	transcript2497.chr17.nnic@NA	transcript2497.chr17.nnic	NA	38910735	38911937	Gene ID= novel_gene_chr17_2498 TPM= 2.12 Transcript Type= NA
chr17	39063303	39151649	39063303	39151649	-	ENST00000315392.8@PLXDC1	ENST00000315392.8	protein_coding	39151362,39139654,39109248,39108904,39108123,39107407,39105854,39087607,39083459,39079104,39077913,39072450,39069856,39063303	39151649,39139832,39109391,39108973,39108245,39107525,39105953,39087702,39083540,39079164,39078048,39072485,39070016,39067959	Gene ID= ENSG00000161381.13 TPM= 2.12 Transcript Type= protein_coding
chr17	39067130	39151637	39067130	39151637	-	transcript2506.chr17.nic@PLXDC1	transcript2506.chr17.nic	protein_coding	39151362,39139654,39109248,39108904,39108123,39107407,39105854,39087607,39083459,39079104,39077913,39069856,39067130	39151637,39139832,39109391,39108973,39108245,39107525,39105953,39087702,39083540,39079164,39078048,39070016,39067959	Gene ID= ENSG00000161381.13 TPM= 4.25 Transcript Type= NA
chr17	39086948	39089866	39086948	39089866	+	transcript2509.chr17.nnic@NA	transcript2509.chr17.nnic	NA	39086948	39089866	Gene ID= novel_gene_chr17_2510 TPM= 2.12 Transcript Type= NA
chr17	39173456	39197703	39173456	39197703	-	ENST00000622445.4@CACNB1	ENST00000622445.4	protein_coding	39197412,39194884,39191474,39187479,39186793,39186496,39184784,39184325,39184031,39183713,39177984,39177350,39173456	39197703,39194970,39191593,39187601,39186929,39186572,39184864,39184383,39184140,39183864,39178079,39177535,39175657	Gene ID= ENSG00000067191.15 TPM= 1.06 Transcript Type= protein_coding
chr17	39177136	39197702	39177136	39197702	-	ENST00000394310.7@CACNB1	ENST00000394310.7	protein_coding	39197412,39194884,39191474,39187479,39186793,39186496,39185131,39184784,39184325,39184031,39183713,39177984,39177136	39197702,39194970,39191593,39187601,39186929,39186572,39185150,39184864,39184383,39184140,39183864,39178079,39177535	Gene ID= ENSG00000067191.15 TPM= 1.06 Transcript Type= protein_coding
chr17	39177136	39197703	39177136	39197703	-	ENST00000344140.5@CACNB1	ENST00000344140.5	protein_coding	39197412,39194884,39191474,39187479,39186793,39186496,39185950,39184784,39184325,39184031,39183713,39177984,39177136	39197703,39194970,39191593,39187601,39186929,39186572,39186104,39184864,39184383,39184140,39183864,39178079,39177535	Gene ID= ENSG00000067191.15 TPM= 23.37 Transcript Type= protein_coding
chr17	39200283	39204727	39200283	39204727	+	ENST00000225430.8@RPL19	ENST00000225430.8	protein_coding	39200283,39201213,39202317,39202989,39204077,39204525	39200349,39201319,39202439,39203109,39204187,39204727	Gene ID= ENSG00000108298.9 TPM= 416.9 Transcript Type= protein_coding
chr17	39200316	39204727	39200316	39204727	+	ENST00000579374.5@RPL19	ENST00000579374.5	protein_coding	39200316,39201222,39202317,39202989,39204077,39204525	39200349,39201319,39202439,39203109,39204187,39204727	Gene ID= ENSG00000108298.9 TPM= 16.46 Transcript Type= protein_coding
chr17	39200342	39204711	39200342	39204711	+	ENST00000579260.5@RPL19	ENST00000579260.5	protein_coding	39200342,39201213,39202317,39202989,39204077,39204525	39200743,39201319,39202439,39203109,39204187,39204711	Gene ID= ENSG00000108298.9 TPM= 2.12 Transcript Type= protein_coding
chr17	39252644	39401663	39252644	39401663	-	ENST00000264658.10@FBXL20	ENST00000264658.10	protein_coding	39401361,39343180,39303585,39301001,39298990,39297127,39285478,39282729,39281389,39274970,39270796,39268827,39265397,39264175,39252644	39401663,39343241,39303639,39301075,39299084,39297195,39285573,39282855,39281463,39275100,39270856,39268871,39265453,39264387,39261567	Gene ID= ENSG00000108306.11 TPM= 2.12 Transcript Type= protein_coding
chr17	39406601	39451286	39406601	39451286	-	ENST00000300651.10@MED1	ENST00000300651.10	protein_coding	39451038,39447798,39443550,39440623,39440386,39439165,39434249,39431942,39431115,39427701,39424627,39423697,39423327,39419717,39415244,39415026,39406601	39451286,39447904,39443628,39440677,39440518,39439193,39434320,39432016,39431188,39427790,39424738,39423821,39423445,39419918,39415339,39415131,39410721	Gene ID= ENSG00000125686.11 TPM= 5.31 Transcript Type= protein_coding
chr17	39461520	39462466	39461520	39462466	+	transcript2530.chr17.nnic@NA	transcript2530.chr17.nnic	NA	39461520	39462466	Gene ID= novel_gene_chr17_2531 TPM= 2.12 Transcript Type= NA
chr17	39462039	39535146	39462039	39535146	+	ENST00000447079.4@CDK12	ENST00000447079.4	protein_coding	39462039,39470879,39490557,39492751,39494524,39501250,39509705,39511529,39515731,39517440,39519956,39524674,39525864,39530604	39463117,39471763,39490733,39492890,39494694,39501439,39509761,39511630,39515808,39517556,39520087,39524885,39526316,39535146	Gene ID= ENSG00000167258.13 TPM= 2.12 Transcript Type= protein_coding
chr17	39548941	39550976	39548941	39550976	+	ENST00000585161.1@CDK12	ENST00000585161.1	protein_coding	39548941	39550976	Gene ID= ENSG00000167258.13 TPM= 1.06 Transcript Type= retained_intron
chr17	39566915	39567559	39566915	39567559	+	ENST00000615852.1@AC009283.1	ENST00000615852.1	lincRNA	39566915	39567559	Gene ID= ENSG00000273576.1 TPM= 1.06 Transcript Type= lincRNA
chr17	39626924	39636626	39626924	39636626	+	ENST00000254079.8@PPP1R1B	ENST00000254079.8	protein_coding	39626924,39629170,39629540,39629972,39633883,39635607,39635816	39627473,39629230,39629562,39630047,39634086,39635726,39636626	Gene ID= ENSG00000131771.13 TPM= 2.12 Transcript Type= protein_coding
chr17	39637152	39663484	39637152	39663484	+	transcript2545.chr17.nic@STARD3	transcript2545.chr17.nic	protein_coding	39637152,39653481,39657008,39657775,39657973,39658405,39659051,39659461,39660211,39660431,39660810,39660981,39662251,39662804	39637231,39653750,39657085,39657852,39658026,39658820,39659106,39659553,39660273,39660526,39660889,39661085,39662344,39663484	Gene ID= ENSG00000131748.15 TPM= 3.19 Transcript Type= NA
chr17	39637152	39663484	39637152	39663484	+	transcript2547.chr17.nic@STARD3	transcript2547.chr17.nic	protein_coding	39637152,39653481,39657008,39657775,39657973,39659051,39659461,39660211,39660431,39660810,39660981,39662251,39662804	39637231,39653750,39657085,39657839,39658820,39659106,39659553,39660273,39660526,39660889,39661085,39662367,39663484	Gene ID= ENSG00000131748.15 TPM= 2.12 Transcript Type= NA
chr17	39659813	39663484	39659813	39663484	+	transcript2549.chr17.nic@STARD3	transcript2549.chr17.nic	protein_coding	39659813,39660431,39660810,39660981,39662251,39662804	39660273,39660526,39660889,39661085,39662344,39663484	Gene ID= ENSG00000131748.15 TPM= 2.66 Transcript Type= NA
chr17	39637065	39663484	39637065	39663484	+	ENST00000336308.9@STARD3	ENST00000336308.9	protein_coding	39637065,39653481,39657008,39657775,39657973,39658405,39658722,39659051,39659461,39660211,39660431,39660810,39660981,39662251,39662804	39637231,39653750,39657085,39657852,39658026,39658522,39658820,39659106,39659553,39660273,39660526,39660889,39661085,39662344,39663484	Gene ID= ENSG00000131748.15 TPM= 30.27 Transcript Type= protein_coding
chr17	39665029	39666555	39665029	39666555	+	transcript2575.chr17.nnic@TCAP	transcript2575.chr17.nnic	protein_coding	39665029,39665373,39665716	39665200,39665469,39666555	Gene ID= ENSG00000173991.5 TPM= 856.59 Transcript Type= NA
chr17	39664187	39666555	39664187	39666555	+	ENST00000309889.2@TCAP	ENST00000309889.2	protein_coding	39664187,39665716	39665469,39666555	Gene ID= ENSG00000173991.5 TPM= 2713.82 Transcript Type= protein_coding
chr17	39671122	39688107	39671122	39688107	-	ENST00000300658.8@PGAP3	ENST00000300658.8	protein_coding	39687834,39685922,39684597,39674617,39673993,39673514,39673051,39671122	39688107,39686019,39684749,39674679,39674054,39673650,39673255,39672866	Gene ID= ENSG00000161395.13 TPM= 26.02 Transcript Type= protein_coding
chr17	39671123	39688057	39671123	39688057	-	ENST00000309862.10@PGAP3	ENST00000309862.10	protein_coding	39687834,39685922,39684597,39674617,39673514,39673051,39671123	39688057,39686019,39684749,39674679,39674054,39673255,39672866	Gene ID= ENSG00000161395.13 TPM= 9.03 Transcript Type= retained_intron
chr17	39726955	39728656	39726955	39728656	+	transcript2604.chr17.nic@ERBB2	transcript2604.chr17.nic	protein_coding	39726955,39727689	39727003,39728656	Gene ID= ENSG00000141736.13 TPM= 9.56 Transcript Type= NA
chr17	39700080	39728662	39700080	39728662	+	ENST00000269571.9@ERBB2	ENST00000269571.9	protein_coding	39700080,39706990,39708321,39709318,39709813,39710086,39710340,39711928,39712322,39715286,39715446,39715740,39716301,39716515,39717320,39719787,39723319,39723538,39723912,39724726,39725049,39725327,39725707,39726562,39726815,39727295,39727689	39700311,39707141,39708534,39709452,39709881,39710201,39710481,39712047,39712448,39715359,39715536,39715939,39716433,39716605,39717480,39719834,39723457,39723660,39724010,39724911,39725204,39725402,39725853,39726659,39727003,39727547,39728662	Gene ID= ENSG00000141736.13 TPM= 60.54 Transcript Type= protein_coding
chr17	39724274	39725689	39724274	39725689	-	transcript2606.chr17.nnic@NA	transcript2606.chr17.nnic	NA	39724274	39725689	Gene ID= novel_gene_chr17_2607 TPM= 4.25 Transcript Type= NA
chr17	39729156	39730787	39729156	39730787	-	ENST00000394231.7@MIEN1	ENST00000394231.7	protein_coding	39730407,39730194,39729685,39729156	39730787,39730291,39729761,39729605	Gene ID= ENSG00000141741.11 TPM= 47.98 Transcript Type= protein_coding
chr17	39729160	39730516	39729160	39730516	-	ENST00000498164.2@MIEN1	ENST00000498164.2	protein_coding	39730194,39729160	39730516,39729761	Gene ID= ENSG00000141741.11 TPM= 1.77 Transcript Type= retained_intron
chr17	39729156	39730491	39729156	39730491	-	ENST00000469568.5@MIEN1	ENST00000469568.5	protein_coding	39730194,39729685,39729156	39730491,39729761,39729605	Gene ID= ENSG00000141741.11 TPM= 4.43 Transcript Type= retained_intron
chr17	39730924	39731512	39730924	39731512	-	transcript2608.chr17.nnic@NA	transcript2608.chr17.nnic	NA	39730924	39731512	Gene ID= novel_gene_chr17_2609 TPM= 3.19 Transcript Type= NA
chr17	39904595	39918590	39904595	39918590	-	ENST00000309481.11@GSDMB	ENST00000309481.11	protein_coding	39918534,39917082,39912326,39909756,39908958,39906961,39906111,39905847,39905426,39904595	39918590,39917330,39912497,39909924,39909042,39906987,39906271,39905985,39905496,39904964	Gene ID= ENSG00000073605.18 TPM= 2.12 Transcript Type= protein_coding
chr17	39904595	39907739	39904595	39907739	-	ENST00000479136.5@GSDMB	ENST00000479136.5	protein_coding	39906111,39905847,39905426,39904595	39907739,39905985,39905496,39904964	Gene ID= ENSG00000073605.18 TPM= 1.06 Transcript Type= retained_intron
chr17	39910090	39911334	39910090	39911334	+	transcript2615.chr17.nnic@NA	transcript2615.chr17.nnic	NA	39910090	39911334	Gene ID= novel_gene_chr17_2616 TPM= 3.19 Transcript Type= NA
chr17	39980797	39997960	39980797	39997960	+	ENST00000264639.8@PSMD3	ENST00000264639.8	protein_coding	39980797,39984294,39986575,39988683,39989739,39990094,39994954,39995176,39995424,39996183,39997330,39997504	39981190,39984484,39986712,39988819,39989929,39990197,39995068,39995295,39995527,39996338,39997380,39997960	Gene ID= ENSG00000108344.14 TPM= 152.95 Transcript Type= protein_coding
chr17	39990231	39992995	39990231	39992995	-	transcript2629.chr17.nnic@NA	transcript2629.chr17.nnic	NA	39990231	39992995	Gene ID= novel_gene_chr17_2630 TPM= 25.49 Transcript Type= NA
chr17	40019102	40054405	40019102	40054405	-	ENST00000394128.6@MED24	ENST00000394128.6	protein_coding	40054361,40053469,40053298,40036116,40035722,40035117,40033345,40033056,40032649,40032043,40031538,40031159,40029748,40028826,40027909,40027383,40026856,40026647,40026156,40023131,40022645,40022394,40021955,40020273,40019785,40019102	40054405,40053635,40053380,40036154,40035795,40035349,40033456,40033206,40032762,40032090,40031620,40031245,40029859,40028968,40027946,40027465,40027034,40026746,40026331,40023395,40022826,40022484,40022054,40020353,40019933,40019645	Gene ID= ENSG00000008838.19 TPM= 54.17 Transcript Type= protein_coding
chr17	40019102	40054416	40019102	40054416	-	transcript2636.chr17.nic@MED24	transcript2636.chr17.nic	protein_coding	40054361,40053469,40053298,40036116,40035722,40035117,40033345,40033056,40032649,40032043,40031538,40031159,40029748,40028826,40027909,40027383,40026856,40026647,40026156,40023131,40022645,40022394,40021955,40020273,40019785,40019102	40054416,40053635,40053380,40036154,40035795,40035349,40033456,40033206,40032762,40032090,40031620,40031245,40029859,40028968,40027946,40027465,40027034,40026746,40026331,40023395,40022826,40022484,40022054,40020482,40019933,40019645	Gene ID= ENSG00000008838.19 TPM= 3.72 Transcript Type= NA
chr17	40062810	40093867	40062810	40093867	+	ENST00000264637.8@THRA	ENST00000264637.8	protein_coding	40062810,40074192,40076871,40077508,40083835,40084610,40086707,40088242,40089206,40093020	40063092,40074541,40076938,40077608,40083982,40084815,40086853,40088500,40089333,40093867	Gene ID= ENSG00000126351.12 TPM= 56.29 Transcript Type= protein_coding
chr17	40090210	40093865	40090210	40093865	+	transcript2657.chr17.nnic@NA	transcript2657.chr17.nnic	NA	40090210	40093865	Gene ID= novel_gene_chr17_2658 TPM= 8.15 Transcript Type= NA
chr17	40092787	40100725	40092787	40100725	-	ENST00000246672.3@NR1D1	ENST00000246672.3	protein_coding	40100064,40097065,40096691,40096443,40095444,40094935,40093912,40092787	40100725,40097403,40096779,40096587,40096087,40095120,40094122,40093282	Gene ID= ENSG00000126368.5 TPM= 37.89 Transcript Type= protein_coding
chr17	40092793	40095772	40092793	40095772	-	transcript2663.chr17.nnic@NA	transcript2663.chr17.nnic	NA	40092793	40095772	Gene ID= novel_gene_chr17_2664 TPM= 3.9 Transcript Type= NA
chr17	40122573	40130293	40122573	40130293	+	ENST00000577454.5@MSL1	ENST00000577454.5	protein_coding	40122573,40126183,40129245	40123380,40126406,40130293	Gene ID= ENSG00000188895.11 TPM= 27.62 Transcript Type= protein_coding
chr17	40140323	40172183	40140323	40172183	+	ENST00000264645.11@CASC3	ENST00000264645.11	protein_coding	40140323,40141207,40141570,40161753,40162002,40162725,40163481,40166797,40167498,40167850,40168203,40169324,40169598,40170447	40140779,40141234,40141607,40161911,40162153,40162901,40164166,40166861,40167612,40167948,40168417,40169446,40169662,40172183	Gene ID= ENSG00000108349.16 TPM= 25.49 Transcript Type= protein_coding
chr17	40164752	40168836	40164752	40168836	-	transcript2686.chr17.nnic@NA	transcript2686.chr17.nnic	NA	40164752	40168836	Gene ID= novel_gene_chr17_2687 TPM= 20.18 Transcript Type= NA
chr17	40219322	40284136	40219322	40284136	+	ENST00000323571.8@WIPF2	ENST00000323571.8	protein_coding	40219322,40256391,40260535,40262525,40264490,40273790,40277083,40278185	40219492,40256522,40260667,40262641,40265146,40273999,40277184,40284136	Gene ID= ENSG00000171475.13 TPM= 1.06 Transcript Type= protein_coding
chr17	40222656	40224386	40222656	40224386	-	transcript2697.chr17.nnic@NA	transcript2697.chr17.nnic	NA	40222656	40224386	Gene ID= novel_gene_chr17_2698 TPM= 7.44 Transcript Type= NA
chr17	40287633	40304657	40287633	40304657	+	ENST00000209728.8@CDC6	ENST00000209728.8	protein_coding	40287633,40289408,40291058,40291469,40293456,40293950,40294364,40295356,40296703,40300828,40301468,40301912	40288090,40289598,40291339,40291668,40293631,40294056,40294503,40295456,40296767,40301030,40301608,40304657	Gene ID= ENSG00000094804.9 TPM= 1.06 Transcript Type= protein_coding
chr17	40342363	40356795	40342363	40356795	+	ENST00000394081.7@RARA	ENST00000394081.7	protein_coding	40342363,40348316,40349784,40351910,40352331,40354302,40355263,40356009	40342867,40348464,40349925,40352070,40352507,40354506,40355421,40356795	Gene ID= ENSG00000131759.17 TPM= 6.9 Transcript Type= protein_coding
chr17	40309194	40356796	40309194	40356796	+	ENST00000254066.9@RARA	ENST00000254066.9	protein_coding	40309194,40330857,40348316,40349784,40351910,40352331,40354302,40355263,40356009	40309286,40331396,40348464,40349925,40352070,40352507,40354506,40355421,40356796	Gene ID= ENSG00000131759.17 TPM= 7.97 Transcript Type= protein_coding
chr17	40340867	40343136	40340867	40343136	-	ENST00000581080.1@RARA-AS1	ENST00000581080.1	antisense_RNA	40342876,40341996,40340867	40343136,40342690,40341700	Gene ID= ENSG00000265666.1 TPM= 3.19 Transcript Type= antisense_RNA
chr17	40360647	40363811	40360647	40363811	-	transcript2708.chr17.nnic@NA	transcript2708.chr17.nnic	NA	40360647	40363811	Gene ID= novel_gene_chr17_2709 TPM= 3.19 Transcript Type= NA
chr17	40388516	40417950	40388516	40417950	-	ENST00000423485.5@TOP2A	ENST00000423485.5	protein_coding	40417771,40416740,40416422,40416005,40413480,40413195,40412759,40411645,40411354,40411109,40408492,40407967,40407549,40406832,40406584,40406384,40404791,40404377,40404152,40402906,40400850,40400529,40400209,40399872,40399040,40398773,40398558,40396283,40395449,40392585,40392218,40392068,40391506,40389965,40388516	40417950,40416895,40416512,40416068,40413625,40413292,40412971,40411818,40411455,40411246,40408630,40408124,40407674,40406942,40406689,40406493,40404883,40404491,40404273,40403054,40401081,40400663,40400409,40400067,40399131,40398937,40398641,40396465,40395539,40392737,40392341,40392111,40391640,40390164,40389647	Gene ID= ENSG00000131747.14 TPM= 1.06 Transcript Type= protein_coding
chr17	40443461	40457731	40443461	40457731	+	ENST00000269593.4@IGFBP4	ENST00000269593.4	protein_coding	40443461,40452985,40453928,40456449	40444084,40453142,40454062,40457731	Gene ID= ENSG00000141753.6 TPM= 442.92 Transcript Type= protein_coding
chr17	40627719	40647842	40627719	40647842	-	transcript2721.chr17.nic@SMARCE1	transcript2721.chr17.nic	protein_coding	40647773,40645796,40645576,40642455,40637492,40636395,40635931,40632195,40631592,40630714,40630208,40627719	40647842,40645847,40645619,40642559,40637572,40636526,40636102,40632367,40631693,40630924,40630286,40628993	Gene ID= ENSG00000073584.18 TPM= 6.72 Transcript Type= NA
chr17	40624962	40648508	40624962	40648508	-	ENST00000348513.10@SMARCE1	ENST00000348513.10	protein_coding	40647773,40645796,40645576,40642455,40637492,40636395,40635931,40632195,40631592,40630714,40624962	40648508,40645847,40645619,40642559,40637572,40636526,40636102,40632367,40631693,40630924,40628993	Gene ID= ENSG00000073584.18 TPM= 1.41 Transcript Type= protein_coding
chr17	40640574	40647814	40640574	40647814	-	ENST00000474246.1@SMARCE1	ENST00000474246.1	protein_coding	40647773,40645796,40645576,40640574	40647814,40645847,40645619,40642559	Gene ID= ENSG00000073584.18 TPM= 2.47 Transcript Type= protein_coding
chr17	40648300	40649718	40648300	40649718	+	ENST00000619697.1@AC073508.3	ENST00000619697.1	antisense_RNA	40648300	40649718	Gene ID= ENSG00000278834.1 TPM= 2.12 Transcript Type= antisense_RNA
chr17	40818117	40822595	40818117	40822595	-	ENST00000269576.5@KRT10	ENST00000269576.5	protein_coding	40821959,40821035,40820511,40820262,40820049,40819517,40818787,40818117	40822595,40821117,40820667,40820423,40820174,40819734,40819161,40818482	Gene ID= ENSG00000186395.7 TPM= 188 Transcript Type= protein_coding
chr17	40818117	40818983	40818117	40818983	-	ENST00000635956.1@KRT10	ENST00000635956.1	protein_coding	40818767,40818117	40818983,40818482	Gene ID= ENSG00000186395.7 TPM= 9.56 Transcript Type= protein_coding
chr17	40819106	40835085	40819106	40835085	+	ENST00000436612.5@TMEM99	ENST00000436612.5	protein_coding	40819106,40833115,40834382	40819170,40833199,40835085	Gene ID= ENSG00000167920.8 TPM= 1.06 Transcript Type= protein_coding
chr17	40819125	40836270	40819125	40836270	+	ENST00000301665.7@TMEM99	ENST00000301665.7	protein_coding	40819125,40833115,40834382	40819208,40833199,40836270	Gene ID= ENSG00000167920.8 TPM= 8.5 Transcript Type= protein_coding
chr17	41523617	41528308	41523617	41528308	-	ENST00000361566.7@KRT19	ENST00000361566.7	protein_coding	41527828,41525191,41524843,41524379,41524143,41523617	41528308,41525273,41524999,41524540,41524268,41523997	Gene ID= ENSG00000171345.13 TPM= 2.12 Transcript Type= protein_coding
chr17	41688885	41691642	41688885	41691642	+	transcript2759.chr17.nnic@NA	transcript2759.chr17.nnic	NA	41688885	41691642	Gene ID= novel_gene_chr17_2760 TPM= 6.37 Transcript Type= NA
chr17	41688893	41692668	41688893	41692668	+	ENST00000469257.1@EIF1	ENST00000469257.1	protein_coding	41688893,41689778,41690088,41690782	41689069,41689941,41690189,41692668	Gene ID= ENSG00000173812.10 TPM= 26.55 Transcript Type= protein_coding
chr17	41688885	41691646	41688885	41691646	+	ENST00000462917.1@EIF1	ENST00000462917.1	protein_coding	41688885,41690782	41690189,41691646	Gene ID= ENSG00000173812.10 TPM= 2.12 Transcript Type= retained_intron
chr17	41688901	41691630	41688901	41691630	+	ENST00000310837.8@EIF1	ENST00000310837.8	protein_coding	41688901,41690088,41690782	41689069,41690189,41691630	Gene ID= ENSG00000173812.10 TPM= 9.56 Transcript Type= processed_transcript
chr17	41688895	41691622	41688895	41691622	+	ENST00000482111.1@EIF1	ENST00000482111.1	protein_coding	41688895,41689778,41690782	41689069,41690189,41691622	Gene ID= ENSG00000173812.10 TPM= 2.12 Transcript Type= retained_intron
chr17	41754604	41786698	41754604	41786698	-	ENST00000310706.9@JUP	ENST00000310706.9	protein_coding	41786588,41771647,41769418,41768969,41767379,41764923,41764713,41762983,41758715,41758399,41757634,41757415,41756175,41755730,41754604	41786698,41771862,41769677,41769207,41767580,41765067,41764816,41763321,41758870,41758518,41757784,41757536,41756214,41755895,41755432	Gene ID= ENSG00000173801.16 TPM= 192.25 Transcript Type= protein_coding
chr17	41754604	41786698	41754604	41786698	-	ENST00000393931.7@JUP	ENST00000393931.7	protein_coding	41786588,41771647,41769418,41768969,41767379,41764923,41764713,41762983,41758715,41758399,41757634,41757415,41756175,41754604	41786698,41771862,41769677,41769207,41767580,41765067,41764816,41763321,41758870,41758518,41757784,41757536,41756214,41755895	Gene ID= ENSG00000173801.16 TPM= 148.7 Transcript Type= protein_coding
chr17	41812931	41823217	41812931	41823217	+	ENST00000321562.8@FKBP10	ENST00000321562.8	protein_coding	41812931,41817058,41818089,41818382,41819210,41819530,41820269,41820947,41821654,41822223	41813279,41817203,41818278,41818527,41819399,41819675,41820461,41821089,41821817,41823217	Gene ID= ENSG00000141756.18 TPM= 1.06 Transcript Type= protein_coding
chr17	41825181	41836237	41825181	41836237	-	transcript2783.chr17.nic@NT5C3B	transcript2783.chr17.nic	protein_coding	41836079,41835859,41835203,41835070,41832392,41830801,41828790,41827426,41825181	41836237,41835957,41835272,41835116,41832477,41830890,41828952,41827626,41825657	Gene ID= ENSG00000141698.16 TPM= 2.47 Transcript Type= NA
chr17	41825181	41836258	41825181	41836258	-	ENST00000523903.5@NT5C3B	ENST00000523903.5	protein_coding	41835859,41835203,41835070,41832392,41830801,41828790,41827426,41825181	41836258,41835272,41835116,41832477,41830890,41828952,41827626,41825657	Gene ID= ENSG00000141698.16 TPM= 19.47 Transcript Type= retained_intron
chr17	41825181	41836202	41825181	41836202	-	ENST00000469698.5@NT5C3B	ENST00000469698.5	protein_coding	41835859,41835588,41835203,41835070,41832392,41830801,41828790,41827426,41825181	41836202,41835682,41835272,41835116,41832477,41830890,41828952,41827626,41825657	Gene ID= ENSG00000141698.16 TPM= 1.41 Transcript Type= retained_intron
chr17	41848523	41865420	41848523	41865420	-	transcript2791.chr17.nnic@KLHL11	transcript2791.chr17.nnic	protein_coding	41864826,41853663,41848523	41865420,41855321,41850351	Gene ID= ENSG00000178502.5 TPM= 5.31 Transcript Type= NA
chr17	41866917	41918962	41866917	41918962	-	ENST00000590151.5@ACLY	ENST00000590151.5	protein_coding	41918880,41913715,41912420,41910222,41909510,41908989,41907442,41906528,41905522,41904729,41901696,41898631,41897749,41896620,41893033,41892279,41887599,41886112,41884193,41883122,41878797,41878103,41873811,41872032,41871689,41869474,41869043,41868709,41866917	41918962,41913900,41912542,41910284,41909700,41909068,41907572,41906646,41905658,41904790,41901813,41898785,41897839,41896649,41893174,41892447,41887703,41886308,41884274,41883232,41878924,41878196,41873965,41872182,41871832,41869587,41869125,41868785,41867904	Gene ID= ENSG00000131473.16 TPM= 23.37 Transcript Type= protein_coding
chr17	41867574	41919022	41867574	41919022	-	ENST00000393896.6@ACLY	ENST00000393896.6	protein_coding	41918880,41913715,41912420,41910222,41909510,41908989,41907442,41906528,41905522,41904729,41901696,41898631,41897749,41893033,41892279,41887599,41886112,41884193,41883122,41878797,41878103,41873811,41872032,41871689,41869474,41869043,41868709,41867574	41919022,41913900,41912542,41910284,41909700,41909068,41907572,41906646,41905658,41904790,41901813,41898785,41897839,41893174,41892447,41887703,41886308,41884274,41883232,41878924,41878196,41873965,41872182,41871832,41869587,41869125,41868785,41867904	Gene ID= ENSG00000131473.16 TPM= 1.06 Transcript Type= protein_coding
chr17	41966815	41975176	41966815	41975176	+	ENST00000393888.1@CNP	ENST00000393888.1	protein_coding	41966815,41968073,41971892,41973475	41966887,41968740,41972031,41975176	Gene ID= ENSG00000173786.16 TPM= 45.67 Transcript Type= protein_coding
chr17	41966741	41977731	41966741	41977731	+	ENST00000393892.7@CNP	ENST00000393892.7	protein_coding	41966741,41968068,41971892,41973475	41966887,41968740,41972031,41977731	Gene ID= ENSG00000173786.16 TPM= 6.37 Transcript Type= protein_coding
chr17	41983574	42017435	41983574	42017435	-	transcript2799.chr17.nic@DNAJC7	transcript2799.chr17.nic	protein_coding	42017340,42000482,41997115,41996311,41994870,41990264,41989404,41988732,41987819,41983574	42017435,42000570,41997239,41996424,41994944,41990382,41989557,41988896,41987910,41983636	Gene ID= ENSG00000168259.14 TPM= 4.25 Transcript Type= NA
chr17	41986531	42017431	41986531	42017431	-	transcript2801.chr17.nic@DNAJC7	transcript2801.chr17.nic	protein_coding	42017340,42000482,41997115,41996311,41994870,41990264,41989404,41988732,41986531	42017431,42000570,41997239,41996424,41994944,41990382,41989557,41988896,41987910	Gene ID= ENSG00000168259.14 TPM= 2.66 Transcript Type= NA
chr17	41986531	42017432	41986531	42017432	-	transcript2802.chr17.nic@DNAJC7	transcript2802.chr17.nic	protein_coding	42017340,42000482,41997115,41996311,41994870,41990264,41989404,41986531	42017432,42000570,41997239,41996424,41994944,41990382,41989557,41988896	Gene ID= ENSG00000168259.14 TPM= 2.66 Transcript Type= NA
chr17	41976433	42017653	41976433	42017653	-	ENST00000457167.8@DNAJC7	ENST00000457167.8	protein_coding	42017340,42000482,41997115,41996311,41994870,41990264,41989404,41988732,41987819,41983563,41982255,41981855,41977261,41976433	42017653,42000570,41997239,41996424,41994944,41990382,41989557,41988896,41987910,41983636,41982401,41982007,41977323,41976770	Gene ID= ENSG00000168259.14 TPM= 69.04 Transcript Type= protein_coding
chr17	41976479	42017151	41976479	42017151	-	ENST00000426588.7@DNAJC7	ENST00000426588.7	protein_coding	42017040,42000482,41997115,41996311,41994870,41990264,41989404,41988732,41987819,41983563,41982255,41981855,41977261,41976479	42017151,42000570,41997239,41996424,41994944,41990382,41989557,41988896,41987910,41983636,41982401,41982007,41977323,41976770	Gene ID= ENSG00000168259.14 TPM= 1.06 Transcript Type= protein_coding
chr17	42020051	42025058	42020051	42025058	+	ENST00000393885.8@NKIRAS2	ENST00000393885.8	protein_coding	42020051,42021564,42022399,42023654	42020204,42021671,42022640,42025058	Gene ID= ENSG00000168256.17 TPM= 22.66 Transcript Type= protein_coding
chr17	42020097	42024774	42020097	42024774	+	ENST00000393881.7@NKIRAS2	ENST00000393881.7	protein_coding	42020097,42021545,42022399,42023654	42020204,42021671,42022640,42024774	Gene ID= ENSG00000168256.17 TPM= 15.22 Transcript Type= protein_coding
chr17	42020097	42024774	42020097	42024774	+	ENST00000393880.5@NKIRAS2	ENST00000393880.5	protein_coding	42020097,42021564,42022399,42023654	42020269,42021671,42022640,42024774	Gene ID= ENSG00000168256.17 TPM= 1.41 Transcript Type= protein_coding
chr17	42113118	42121058	42113118	42121058	-	ENST00000465682.5@KAT2A	ENST00000465682.5	protein_coding	42120966,42120706,42120225,42120030,42119537,42119054,42118297,42117907,42117678,42117388,42117035,42115723,42114892,42114490,42114358,42114219,42114000,42113118	42121058,42120829,42120370,42120119,42119718,42119436,42118403,42118017,42117814,42117596,42117161,42115833,42115035,42114604,42114394,42114282,42114084,42113842	Gene ID= ENSG00000108773.10 TPM= 36.64 Transcript Type= nonsense_mediated_decay
chr17	42113108	42121358	42113108	42121358	-	ENST00000225916.9@KAT2A	ENST00000225916.9	protein_coding	42120966,42120706,42120225,42120030,42119537,42119245,42118297,42117907,42117678,42117388,42117035,42115723,42114892,42114490,42114358,42114219,42114000,42113108	42121358,42120829,42120370,42120119,42119718,42119436,42118403,42118017,42117814,42117596,42117161,42115833,42115035,42114604,42114394,42114282,42114084,42113842	Gene ID= ENSG00000108773.10 TPM= 12.21 Transcript Type= protein_coding
chr17	42124978	42155000	42124978	42155000	-	transcript2823.chr17.nic@RAB5C	transcript2823.chr17.nic	protein_coding	42154893,42137762,42130337,42128649,42128261,42126755,42124978	42155000,42137878,42130590,42128800,42128383,42126848,42125898	Gene ID= ENSG00000108774.14 TPM= 32.93 Transcript Type= NA
chr17	42124976	42155017	42124976	42155017	-	ENST00000346213.8@RAB5C	ENST00000346213.8	protein_coding	42154893,42130337,42128649,42128261,42126755,42124976	42155017,42130590,42128800,42128383,42126848,42125898	Gene ID= ENSG00000108774.14 TPM= 92.41 Transcript Type= protein_coding
chr17	42189089	42194484	42189089	42194484	-	ENST00000587427.5@GHDC	ENST00000587427.5	protein_coding	42194393,42193767,42193317,42192906,42192241,42191018,42190832,42190624,42190185,42189089	42194484,42193850,42193594,42193027,42192742,42191210,42190903,42190757,42190270,42189921	Gene ID= ENSG00000167925.15 TPM= 4.78 Transcript Type= protein_coding
chr17	42189088	42194195	42189088	42194195	-	ENST00000301671.12@GHDC	ENST00000301671.12	protein_coding	42193767,42193317,42192906,42192241,42191018,42190832,42190624,42190185,42189088	42194195,42193594,42193027,42192742,42191210,42190903,42190757,42190270,42189921	Gene ID= ENSG00000167925.15 TPM= 10.09 Transcript Type= protein_coding
chr17	42199168	42276406	42199168	42276406	-	ENST00000293328.7@STAT5B	ENST00000293328.7	protein_coding	42276248,42232000,42227529,42224779,42223382,42219712,42219312,42218723,42218151,42217377,42217160,42216014,42211984,42210403,42210171,42207558,42202757,42202340,42199168	42276406,42232137,42227685,42224868,42223556,42219842,42219463,42218878,42218330,42217464,42217282,42216106,42212190,42210497,42210301,42207728,42202808,42202447,42201864	Gene ID= ENSG00000173757.9 TPM= 63.73 Transcript Type= protein_coding
chr17	42287547	42311943	42287547	42311943	+	ENST00000345506.8@STAT5A	ENST00000345506.8	protein_coding	42287547,42288056,42289402,42289866,42291972,42295619,42299751,42300130,42300715,42301275,42304342,42304530,42305610,42306241,42307402,42307593,42308178,42309047,42309377,42310507	42287635,42288598,42289539,42290022,42292061,42295793,42299881,42300281,42300870,42301454,42304429,42304652,42305702,42306447,42307496,42307723,42308333,42309098,42309484,42311943	Gene ID= ENSG00000126561.16 TPM= 18.06 Transcript Type= protein_coding
chr17	42314854	42388513	42314854	42388513	-	transcript2842.chr17.nic@STAT3	transcript2842.chr17.nic	protein_coding	42388279,42348389,42346569,42345559,42339314,42338731,42337763,42337435,42333891,42333673,42331472,42329747,42329554,42329410,42326116,42324963,42324711,42323573,42323260,42323004,42322282,42317182,42316789,42314854	42388513,42348539,42346713,42345657,42339409,42338812,42337857,42337586,42334049,42333765,42331531,42329776,42329647,42329457,42326199,42325061,42324846,42323625,42323354,42323143,42322494,42317224,42316851,42315800	Gene ID= ENSG00000168610.14 TPM= 12.48 Transcript Type= NA
chr17	42313324	42388568	42313324	42388568	-	ENST00000264657.9@STAT3	ENST00000264657.9	protein_coding	42388279,42348389,42346569,42345559,42339314,42338731,42337763,42337435,42333891,42333673,42331472,42329747,42329554,42329410,42326116,42324963,42324711,42323573,42323260,42323004,42322282,42317182,42316789,42313324	42388568,42348539,42346713,42345657,42339409,42338812,42337857,42337586,42334049,42333765,42331531,42329776,42329647,42329457,42326199,42325061,42324846,42323625,42323354,42323143,42322494,42317224,42316901,42315800	Gene ID= ENSG00000168610.14 TPM= 96.48 Transcript Type= protein_coding
chr17	42314854	42388495	42314854	42388495	-	transcript2845.chr17.nic@STAT3	transcript2845.chr17.nic	protein_coding	42388279,42348389,42346569,42345559,42339314,42338731,42337763,42337435,42333891,42333673,42331472,42329747,42329554,42329410,42326116,42324963,42324711,42323573,42323260,42323004,42322282,42317182,42316789,42314854	42388495,42348520,42346713,42345657,42339409,42338812,42337857,42337586,42334049,42333765,42331531,42329776,42329647,42329457,42326199,42325061,42324846,42323625,42323354,42323143,42322494,42317224,42316901,42315800	Gene ID= ENSG00000168610.14 TPM= 19.3 Transcript Type= NA
chr17	42314854	42388439	42314854	42388439	-	ENST00000585517.5@STAT3	ENST00000585517.5	protein_coding	42388279,42348389,42346569,42345559,42339314,42338731,42337763,42337435,42333891,42333673,42331472,42329747,42329554,42329410,42326116,42324963,42324711,42323573,42323260,42323004,42322282,42317182,42316789,42314854	42388439,42348520,42346713,42345657,42339409,42338812,42337857,42337586,42334049,42333765,42331531,42329776,42329647,42329457,42326199,42325061,42324846,42323625,42323354,42323143,42322494,42317224,42316851,42315800	Gene ID= ENSG00000168610.14 TPM= 25.49 Transcript Type= protein_coding
chr17	42315559	42388414	42315559	42388414	-	ENST00000404395.3@STAT3	ENST00000404395.3	protein_coding	42388279,42348389,42346569,42345559,42339314,42338731,42337763,42337435,42333891,42333673,42331472,42329747,42329554,42329410,42326116,42324963,42324711,42323573,42323260,42323004,42322285,42317182,42316789,42315559	42388414,42348517,42346713,42345657,42339409,42338812,42337857,42337586,42334049,42333765,42331531,42329776,42329647,42329457,42326199,42325061,42324846,42323625,42323354,42323143,42322494,42317224,42316901,42315800	Gene ID= ENSG00000168610.14 TPM= 10.62 Transcript Type= protein_coding
chr17	42387610	42388432	42387610	42388432	-	transcript2881.chr17.nnic@NA	transcript2881.chr17.nnic	NA	42387610	42388432	Gene ID= novel_gene_chr17_2882 TPM= 4.25 Transcript Type= NA
chr17	42402452	42423271	42402452	42423271	-	transcript2885.chr17.nnic@CAVIN1	transcript2885.chr17.nnic	protein_coding	42422627,42404536,42402452	42423271,42405388,42404373	Gene ID= ENSG00000177469.12 TPM= 91.88 Transcript Type= NA
chr17	42402452	42423517	42402452	42423517	-	ENST00000357037.5@CAVIN1	ENST00000357037.5	protein_coding	42422627,42402452	42423517,42405388	Gene ID= ENSG00000177469.12 TPM= 718.55 Transcript Type= protein_coding
chr17	42410328	42411207	42410328	42411207	+	transcript2894.chr17.nnic@NA	transcript2894.chr17.nnic	NA	42410328	42411207	Gene ID= novel_gene_chr17_2895 TPM= 27.62 Transcript Type= NA
chr17	42458858	42471439	42458858	42471439	+	ENST00000588629.1@ATP6V0A1	ENST00000588629.1	protein_coding	42458858,42460848,42466429,42468010,42470090	42458963,42461011,42466507,42468107,42471439	Gene ID= ENSG00000033627.16 TPM= 2.12 Transcript Type= retained_intron
chr17	42458880	42522582	42458880	42522582	+	ENST00000264649.10@ATP6V0A1	ENST00000264649.10	protein_coding	42458880,42460848,42466429,42468010,42470090,42477639,42478463,42480667,42483038,42487155,42490487,42494334,42495034,42495626,42498924,42500707,42501197,42507520,42513861,42514289,42521027	42458963,42461011,42466507,42468107,42470218,42477742,42478589,42480749,42483131,42487367,42490637,42494473,42495188,42495716,42499042,42500923,42501304,42507627,42513978,42514460,42522582	Gene ID= ENSG00000033627.16 TPM= 22.31 Transcript Type= protein_coding
chr17	42536172	42544449	42536172	42544449	+	ENST00000225927.6@NAGLU	ENST00000225927.6	protein_coding	42536172,42537398,42538339,42538670,42540950,42543028	42536655,42537545,42538485,42538755,42541206,42544449	Gene ID= ENSG00000108784.9 TPM= 32.93 Transcript Type= protein_coding
chr17	42536243	42539624	42536243	42539624	+	transcript2909.chr17.nnic@NAGLU	transcript2909.chr17.nnic	protein_coding	42536243,42537398,42538339,42538670,42539017	42536655,42537545,42538485,42538755,42539624	Gene ID= ENSG00000108784.9 TPM= 2.12 Transcript Type= NA
chr17	42545447	42550378	42545447	42550378	-	transcript2917.chr17.nnic@NA	transcript2917.chr17.nnic	NA	42545447	42550378	Gene ID= novel_gene_chr17_2918 TPM= 4.25 Transcript Type= NA
chr17	42550654	42553692	42550654	42553692	-	transcript2915.chr17.nnic@NA	transcript2915.chr17.nnic	NA	42550654	42553692	Gene ID= novel_gene_chr17_2916 TPM= 3.19 Transcript Type= NA
chr17	42552436	42554748	42552436	42554748	-	ENST00000590513.2@AC067852.2	ENST00000590513.2	antisense_RNA	42552436	42554748	Gene ID= ENSG00000266962.2 TPM= 15.93 Transcript Type= antisense_RNA
chr17	42562147	42566260	42562147	42566260	+	ENST00000421097.6@COASY	ENST00000421097.6	protein_coding	42562147,42562612,42563961,42564446,42564709,42564983,42565227,42565471,42565659,42565906	42562219,42563322,42564175,42564577,42564898,42565047,42565311,42565568,42565805,42566260	Gene ID= ENSG00000068120.14 TPM= 9.56 Transcript Type= protein_coding
chr17	42562167	42566275	42562167	42566275	+	ENST00000393818.2@COASY	ENST00000393818.2	protein_coding	42562167,42563961,42564446,42564709,42564983,42565227,42565471,42565659,42565906	42563322,42564175,42564577,42564898,42565047,42565311,42565568,42565805,42566275	Gene ID= ENSG00000068120.14 TPM= 16.99 Transcript Type= protein_coding
chr17	42567072	42573239	42567072	42573239	+	ENST00000246912.8@MLX	ENST00000246912.8	protein_coding	42567072,42567619,42568470,42568837,42569204,42569507,42569982,42571547	42567328,42567655,42568559,42568943,42569303,42569606,42570183,42573239	Gene ID= ENSG00000108788.11 TPM= 2.66 Transcript Type= protein_coding
chr17	42567102	42572705	42567102	42572705	+	transcript2943.chr17.nic@MLX	transcript2943.chr17.nic	protein_coding	42567102,42567619,42568837,42569204,42569507,42569982,42571547	42567328,42567655,42568943,42569303,42569606,42570183,42572705	Gene ID= ENSG00000108788.11 TPM= 16.99 Transcript Type= NA
chr17	42567068	42573239	42567068	42573239	+	ENST00000435881.6@MLX	ENST00000435881.6	protein_coding	42567068,42567619,42568470,42568837,42569204,42569507,42569982,42571547	42567166,42567655,42568559,42568943,42569303,42569606,42570183,42573239	Gene ID= ENSG00000108788.11 TPM= 3.72 Transcript Type= protein_coding
chr17	42572315	42577795	42572315	42577795	-	ENST00000393795.7@PSMC3IP	ENST00000393795.7	protein_coding	42577653,42577461,42577213,42574099,42573478,42573311,42573107,42572315	42577795,42577561,42577302,42574210,42573623,42573364,42573166,42573024	Gene ID= ENSG00000131470.14 TPM= 5.31 Transcript Type= protein_coding
chr17	42579515	42609384	42579515	42609384	-	ENST00000309428.9@RETREG3	ENST00000309428.9	protein_coding	42609086,42592056,42587834,42586765,42586053,42585125,42583498,42582674,42579515	42609384,42592162,42587864,42586891,42586137,42585262,42583580,42582806,42582270	Gene ID= ENSG00000141699.10 TPM= 24.43 Transcript Type= protein_coding
chr17	42609641	42615234	42609641	42615234	+	transcript2959.chr17.nnic@TUBG1	transcript2959.chr17.nnic	protein_coding	42609641,42610108,42610423,42612075,42612427,42612947,42613647,42614260,42614496,42614844	42609786,42610220,42610590,42612143,42612506,42613073,42613733,42614412,42614657,42615234	Gene ID= ENSG00000131462.7 TPM= 3.19 Transcript Type= NA
chr17	42609676	42615234	42609676	42615234	+	ENST00000251413.7@TUBG1	ENST00000251413.7	protein_coding	42609676,42610108,42610423,42612075,42612427,42612947,42613647,42613849,42614260,42614496,42614844	42609786,42610220,42610590,42612143,42612506,42613073,42613733,42613998,42614412,42614657,42615234	Gene ID= ENSG00000131462.7 TPM= 142.33 Transcript Type= protein_coding
chr17	42613822	42615232	42613822	42615232	+	transcript2963.chr17.nnic@NA	transcript2963.chr17.nnic	NA	42613822	42615232	Gene ID= novel_gene_chr17_2964 TPM= 2.12 Transcript Type= NA
chr17	42659273	42667006	42659273	42667006	+	transcript2973.chr17.nnic@TUBG2	transcript2973.chr17.nnic	protein_coding	42659273,42659834,42660149,42660639,42661201,42662973,42663377,42665476,42665678,42666087,42666323,42666603	42659552,42659946,42660316,42660707,42661227,42663052,42663503,42665562,42665827,42666239,42666484,42667006	Gene ID= ENSG00000037042.8 TPM= 9.56 Transcript Type= NA
chr17	42659273	42662456	42659273	42662456	+	transcript2980.chr17.nic@TUBG2	transcript2980.chr17.nic	protein_coding	42659273,42659834,42660149,42660639	42659552,42659946,42660316,42662456	Gene ID= ENSG00000037042.8 TPM= 3.19 Transcript Type= NA
chr17	42659305	42667006	42659305	42667006	+	ENST00000251412.7@TUBG2	ENST00000251412.7	protein_coding	42659305,42659834,42660149,42660639,42662973,42663377,42665476,42665678,42666087,42666323,42666603	42659552,42659946,42660316,42660707,42663052,42663503,42665562,42665827,42666239,42666484,42667006	Gene ID= ENSG00000037042.8 TPM= 50.98 Transcript Type= protein_coding
chr17	42666038	42667005	42666038	42667005	+	transcript2986.chr17.nnic@NA	transcript2986.chr17.nnic	NA	42666038	42667005	Gene ID= novel_gene_chr17_2987 TPM= 2.12 Transcript Type= NA
chr17	42667914	42676973	42667914	42676973	-	transcript2972.chr17.nic@PLEKHH3	transcript2972.chr17.nic	protein_coding	42676402,42674354,42673934,42673643,42673399,42673176,42672086,42671351,42671003,42670573,42669943,42669430,42667914	42676973,42674409,42674013,42673834,42673556,42673296,42672392,42671558,42671130,42670705,42670376,42669621,42668303	Gene ID= ENSG00000068137.14 TPM= 2.47 Transcript Type= NA
chr17	42667914	42676951	42667914	42676951	-	ENST00000591022.5@PLEKHH3	ENST00000591022.5	protein_coding	42676402,42674354,42673934,42673643,42673399,42673176,42672086,42671351,42670994,42670573,42669918,42669430,42667914	42676951,42674409,42674013,42673834,42673556,42673296,42672392,42671558,42671130,42670705,42670376,42669621,42668303	Gene ID= ENSG00000068137.14 TPM= 23.19 Transcript Type= protein_coding
chr17	42667944	42676994	42667944	42676994	-	ENST00000293349.10@PLEKHH3	ENST00000293349.10	protein_coding	42676402,42674354,42673934,42673643,42673399,42673176,42672086,42671351,42671003,42670573,42669918,42669430,42667944	42676994,42674409,42674013,42673834,42673556,42673296,42672392,42671558,42671130,42670705,42670376,42669621,42668303	Gene ID= ENSG00000068137.14 TPM= 16.28 Transcript Type= protein_coding
chr17	42667914	42676633	42667914	42676633	-	ENST00000591196.5@PLEKHH3	ENST00000591196.5	protein_coding	42676402,42674354,42673934,42673643,42673399,42673176,42672086,42671351,42670994,42670573,42669943,42669430,42667914	42676633,42674409,42674013,42673834,42673556,42673296,42672392,42671558,42671130,42670705,42670376,42669621,42668303	Gene ID= ENSG00000068137.14 TPM= 3.72 Transcript Type= nonsense_mediated_decay
chr17	42668813	42669956	42668813	42669956	-	transcript2988.chr17.nnic@NA	transcript2988.chr17.nnic	NA	42668813	42669956	Gene ID= novel_gene_chr17_2989 TPM= 2.12 Transcript Type= NA
chr17	42679420	42683064	42679420	42683064	-	ENST00000591765.1@CCR10	ENST00000591765.1	protein_coding	42682321,42679420	42683064,42680617	Gene ID= ENSG00000184451.5 TPM= 3.19 Transcript Type= protein_coding
chr17	42761194	42763036	42761194	42763036	+	ENST00000253796.9@RAMP2	ENST00000253796.9	protein_coding	42761194,42761834,42762355,42762597	42761358,42761899,42762463,42763036	Gene ID= ENSG00000131477.10 TPM= 21.24 Transcript Type= protein_coding
chr17	42773436	42779599	42773436	42779599	+	ENST00000253794.6@VPS25	ENST00000253794.6	protein_coding	42773436,42773733,42774646,42775381,42776245,42778957	42773528,42773878,42774699,42775469,42776320,42779599	Gene ID= ENSG00000131475.6 TPM= 44.61 Transcript Type= protein_coding
chr17	42797634	42798704	42797634	42798704	-	ENST00000328434.7@COA3	ENST00000328434.7	protein_coding	42798468,42797634	42798704,42798167	Gene ID= ENSG00000183978.7 TPM= 53.11 Transcript Type= protein_coding
chr17	42810134	42824263	42810134	42824263	-	ENST00000361523.8@BECN1	ENST00000361523.8	protein_coding	42824133,42823748,42820774,42819548,42818787,42818544,42818221,42815908,42814524,42813948,42811655,42810134	42824263,42823879,42820841,42819609,42818877,42818680,42818415,42816054,42814673,42814008,42811797,42810928	Gene ID= ENSG00000126581.12 TPM= 107.79 Transcript Type= protein_coding
chr17	42810137	42824263	42810137	42824263	-	ENST00000590099.5@BECN1	ENST00000590099.5	protein_coding	42824155,42823748,42820774,42819548,42818787,42818544,42818221,42815908,42814524,42813948,42811655,42810137	42824263,42823879,42820841,42819609,42818877,42818680,42818415,42816054,42814673,42814008,42811797,42810928	Gene ID= ENSG00000126581.12 TPM= 137.53 Transcript Type= protein_coding
chr17	42833420	42841695	42833420	42841695	+	transcript3024.chr17.nic@PSME3	transcript3024.chr17.nic	protein_coding	42833420,42834344,42834515,42834772,42837649,42838093,42838731,42838945,42839112,42839294,42841498	42833939,42834376,42834577,42834876,42837697,42838205,42838799,42839012,42839166,42839380,42841695	Gene ID= ENSG00000131467.10 TPM= 2.12 Transcript Type= NA
chr17	42851184	42858124	42851184	42858124	+	ENST00000308423.6@AOC3	ENST00000308423.6	protein_coding	42851184,42854448,42855444,42856275	42852943,42854733,42855573,42858124	Gene ID= ENSG00000131471.6 TPM= 20.18 Transcript Type= protein_coding
chr17	42950546	42964476	42950546	42964476	-	ENST00000427569.6@AARSD1	ENST00000427569.6	protein_coding	42964402,42964106,42961192,42957138,42956404,42956204,42955842,42955158,42954876,42953724,42951800,42950546	42964476,42964237,42961351,42957195,42956560,42956320,42955972,42955224,42954967,42953778,42951894,42950728	Gene ID= ENSG00000266967.6 TPM= 21.24 Transcript Type= protein_coding
chr17	42968726	42980096	42968726	42980096	-	transcript3038.chr17.nic@PTGES3L	transcript3038.chr17.nic	protein_coding	42980046,42979550,42979378,42979170,42971607,42970289,42968726	42980096,42979685,42979444,42979268,42971696,42970342,42969186	Gene ID= ENSG00000267060.5 TPM= 58.42 Transcript Type= NA
chr17	42968104	42980433	42968104	42980433	-	ENST00000409446.7@PTGES3L	ENST00000409446.7	protein_coding	42980046,42979378,42979170,42971607,42970289,42968104	42980433,42979444,42979268,42971696,42970342,42969186	Gene ID= ENSG00000267060.5 TPM= 6.37 Transcript Type= protein_coding
chr17	42970379	42972208	42970379	42972208	+	transcript3061.chr17.nnic@NA	transcript3061.chr17.nnic	NA	42970379	42972208	Gene ID= novel_gene_chr17_3062 TPM= 2.12 Transcript Type= NA
chr17	42980565	42993690	42980565	42993690	+	ENST00000361677.5@RUNDC1	ENST00000361677.5	protein_coding	42980565,42987256,42989341,42990317,42990851	42981074,42987414,42989539,42990436,42993690	Gene ID= ENSG00000198863.7 TPM= 5.31 Transcript Type= protein_coding
chr17	42984282	42988169	42984282	42988169	-	transcript3063.chr17.nnic@NA	transcript3063.chr17.nnic	NA	42984282	42988169	Gene ID= novel_gene_chr17_3064 TPM= 4.25 Transcript Type= NA
chr17	42998434	43002959	42998434	43002959	+	ENST00000253788.9@RPL27	ENST00000253788.9	protein_coding	42998434,42998749,42999933,43002673,43002872	42998471,42998831,43000102,43002783,43002959	Gene ID= ENSG00000131469.12 TPM= 218.45 Transcript Type= protein_coding
chr17	42998436	43002959	42998436	43002959	+	ENST00000588830.1@RPL27	ENST00000588830.1	protein_coding	42998436,42998749,43002673,43002872	42998471,42998831,43002783,43002959	Gene ID= ENSG00000131469.12 TPM= 28.33 Transcript Type= nonsense_mediated_decay
chr17	42998477	43002932	42998477	43002932	+	ENST00000589913.5@RPL27	ENST00000589913.5	protein_coding	42998477,42999933,43002673,43002872	42998831,43000102,43002783,43002932	Gene ID= ENSG00000131469.12 TPM= 6.37 Transcript Type= protein_coding
chr17	43006725	43014456	43006725	43014456	+	ENST00000415816.6@IFI35	ENST00000415816.6	protein_coding	43006725,43012179,43013047,43013267,43013476,43013776,43014108	43006968,43012277,43013194,43013373,43013662,43013882,43014456	Gene ID= ENSG00000068079.7 TPM= 3.19 Transcript Type= protein_coding
chr17	43006740	43014456	43006740	43014456	+	ENST00000438323.2@IFI35	ENST00000438323.2	protein_coding	43006740,43012179,43013047,43013267,43013476,43013776,43014108	43006968,43012277,43013194,43013379,43013662,43013882,43014456	Gene ID= ENSG00000068079.7 TPM= 4.25 Transcript Type= protein_coding
chr17	43014605	43022418	43014605	43022418	-	ENST00000355653.7@VAT1	ENST00000355653.7	protein_coding	43021936,43018592,43018036,43017841,43016307,43014605	43022418,43018799,43018206,43017930,43016548,43016144	Gene ID= ENSG00000108828.15 TPM= 101.97 Transcript Type= protein_coding
chr17	43125580	43140325	43125580	43140325	+	transcript3074.chr17.nnic@NBR2	transcript3074.chr17.nnic	transcribed_unprocessed_pseudogene	43125580,43131208,43132956,43138657	43125770,43131270,43133137,43140325	Gene ID= ENSG00000198496.10 TPM= 4.25 Transcript Type= NA
chr17	43125580	43134638	43125580	43134638	+	transcript3075.chr17.nic@NBR2	transcript3075.chr17.nic	transcribed_unprocessed_pseudogene	43125580,43131208,43132599	43125770,43131270,43134638	Gene ID= ENSG00000198496.10 TPM= 4.25 Transcript Type= NA
chr17	43133639	43136117	43133639	43136117	-	transcript3079.chr17.nnic@NA	transcript3079.chr17.nnic	NA	43133639	43136117	Gene ID= novel_gene_chr17_3080 TPM= 7.44 Transcript Type= NA
chr17	43136026	43137450	43136026	43137450	+	transcript3077.chr17.nnic@NA	transcript3077.chr17.nnic	NA	43136026	43137450	Gene ID= novel_gene_chr17_3078 TPM= 3.19 Transcript Type= NA
chr17	43171185	43211689	43171185	43211689	+	transcript3091.chr17.nnic@NBR1	transcript3091.chr17.nnic	protein_coding	43171185,43175791,43177936,43179394,43180795,43186250,43189042,43189588,43190609,43193094,43193348,43194350,43194964,43196481,43196942,43200167,43201686,43202655,43203681,43209901	43171302,43175901,43177998,43179412,43180817,43186444,43189119,43189802,43190776,43193253,43193638,43194499,43195039,43196591,43197106,43200608,43201780,43202712,43203786,43211689	Gene ID= ENSG00000188554.13 TPM= 32.22 Transcript Type= NA
chr17	43171185	43200763	43171185	43200763	+	transcript3093.chr17.nic@NBR1	transcript3093.chr17.nic	protein_coding	43171185,43175791,43177936,43179394,43180795,43186250,43189042,43189588,43190609,43191372,43193094,43193348,43194350,43194964,43196481,43196942,43200167	43171302,43175901,43177998,43179412,43180817,43186444,43189119,43189802,43190776,43191581,43193253,43193638,43194499,43195039,43196591,43197106,43200763	Gene ID= ENSG00000188554.13 TPM= 5.66 Transcript Type= NA
chr17	43220098	43221385	43220098	43221385	-	transcript3101.chr17.nnic@NA	transcript3101.chr17.nnic	NA	43220098	43221385	Gene ID= novel_gene_chr17_3102 TPM= 2.12 Transcript Type= NA
chr17	43223248	43225228	43223248	43225228	-	transcript3103.chr17.nnic@NA	transcript3103.chr17.nnic	NA	43223248	43225228	Gene ID= novel_gene_chr17_3104 TPM= 8.5 Transcript Type= NA
chr17	43360041	43361361	43360041	43361361	-	ENST00000624705.1@AC109326.1	ENST00000624705.1	TEC	43360041	43361361	Gene ID= ENSG00000279602.1 TPM= 5.31 Transcript Type= TEC
chr17	43398959	43401137	43398959	43401137	+	ENST00000320033.4@ARL4D	ENST00000320033.4	protein_coding	43398959,43399661	43399093,43401137	Gene ID= ENSG00000175906.4 TPM= 5.31 Transcript Type= protein_coding
chr17	43483963	43526786	43483963	43526786	+	ENST00000540306.5@DHX8	ENST00000540306.5	protein_coding	43483963,43489449,43490391,43491165,43492183,43492681,43493445,43493683,43496181,43498862,43499956,43504644,43507003,43507503,43507809,43508339,43513362,43517167,43520130,43520751,43521369,43522047,43526496	43484185,43489534,43490463,43491250,43492292,43493040,43493589,43493886,43496268,43498959,43500103,43504825,43507197,43507688,43508019,43508520,43513502,43517322,43520267,43520879,43521565,43522226,43526786	Gene ID= ENSG00000067596.10 TPM= 2.12 Transcript Type= protein_coding
chr17	43524958	43526508	43524958	43526508	-	transcript3116.chr17.nnic@NA	transcript3116.chr17.nnic	NA	43524958	43526508	Gene ID= novel_gene_chr17_3117 TPM= 3.19 Transcript Type= NA
chr17	43526140	43526786	43526140	43526786	+	transcript3112.chr17.nnic@NA	transcript3112.chr17.nnic	NA	43526140	43526786	Gene ID= novel_gene_chr17_3113 TPM= 3.19 Transcript Type= NA
chr17	43640388	43661954	43640388	43661954	-	ENST00000318579.8@MEOX1	ENST00000318579.8	protein_coding	43661066,43643488,43640388	43661954,43643660,43642032	Gene ID= ENSG00000005102.12 TPM= 35.58 Transcript Type= protein_coding
chr17	43658648	43661684	43658648	43661684	+	transcript3127.chr17.nnic@NA	transcript3127.chr17.nnic	NA	43658648	43661684	Gene ID= novel_gene_chr17_3128 TPM= 5.84 Transcript Type= NA
chr17	43763583	43767374	43763583	43767374	-	transcript3139.chr17.nnic@NA	transcript3139.chr17.nnic	NA	43763583	43767374	Gene ID= novel_gene_chr17_3140 TPM= 2.12 Transcript Type= NA
chr17	43766131	43778958	43766131	43778958	-	transcript3129.chr17.nic@DUSP3	transcript3129.chr17.nic	protein_coding	43778800,43774712,43769582,43766131	43778958,43774938,43769814,43766784	Gene ID= ENSG00000108861.8 TPM= 12.75 Transcript Type= NA
chr17	43768277	43778967	43768277	43778967	-	transcript3132.chr17.nic@DUSP3	transcript3132.chr17.nic	protein_coding	43778800,43774712,43774035,43768277	43778967,43774938,43774109,43769814	Gene ID= ENSG00000108861.8 TPM= 13.81 Transcript Type= NA
chr17	43766121	43778988	43766121	43778988	-	ENST00000226004.7@DUSP3	ENST00000226004.7	protein_coding	43778800,43774712,43766121	43778988,43774938,43769814	Gene ID= ENSG00000108861.8 TPM= 193.31 Transcript Type= protein_coding
chr17	43801418	43833146	43801418	43833146	-	transcript3141.chr17.nic@MPP3	transcript3141.chr17.nic	protein_coding	43833101,43832761,43832077,43831882,43831559,43831244,43830027,43829654,43827751,43825756,43823931,43820862,43818046,43816038,43814197,43814011,43811112,43810807,43808956,43801418	43833146,43832819,43832251,43831943,43831677,43831321,43830107,43829791,43827832,43825841,43824005,43821058,43818110,43816079,43814361,43814091,43811205,43810915,43809078,43801877	Gene ID= ENSG00000161647.18 TPM= 5.31 Transcript Type= NA
chr17	43801418	43833170	43801418	43833170	-	ENST00000496503.5@MPP3	ENST00000496503.5	protein_coding	43833101,43832761,43831882,43831559,43831244,43830027,43829654,43827751,43825756,43823931,43820862,43818046,43816038,43814197,43814011,43811112,43810807,43808956,43801418	43833170,43832819,43831943,43831677,43831321,43830107,43829791,43827832,43825841,43824005,43821058,43818110,43816079,43814361,43814091,43811205,43810915,43809078,43801877	Gene ID= ENSG00000161647.18 TPM= 10.62 Transcript Type= nonsense_mediated_decay
chr17	43847156	43863629	43847156	43863629	+	transcript3148.chr17.nic@CD300LG	transcript3148.chr17.nic	protein_coding	43847156,43848558,43853960,43855207,43857104,43861798	43847259,43848893,43854044,43855319,43857156,43863629	Gene ID= ENSG00000161649.12 TPM= 5.84 Transcript Type= NA
chr17	43847176	43863629	43847176	43863629	+	ENST00000317310.4@CD300LG	ENST00000317310.4	protein_coding	43847176,43848558,43852912,43853807,43855207,43857104,43861798	43847259,43848893,43853013,43854044,43855319,43857156,43863629	Gene ID= ENSG00000161649.12 TPM= 4.78 Transcript Type= protein_coding
chr17	43859734	43863624	43859734	43863624	+	transcript3150.chr17.nnic@NA	transcript3150.chr17.nnic	NA	43859734	43863624	Gene ID= novel_gene_chr17_3151 TPM= 3.19 Transcript Type= NA
chr17	43875357	43907745	43875357	43907745	-	ENST00000269095.8@MPP2	ENST00000269095.8	protein_coding	43907474,43904430,43898262,43883203,43882903,43882284,43881458,43881244,43881090,43880691,43879782,43879275,43875357	43907745,43904493,43898380,43883355,43883052,43882511,43881589,43881349,43881158,43880852,43879984,43879403,43877983	Gene ID= ENSG00000108852.14 TPM= 13.81 Transcript Type= protein_coding
chr17	44011188	44023151	44011188	44023151	-	ENST00000589334.5@TMEM101	ENST00000589334.5	protein_coding	44023039,44014816,44014357,44013009,44011188	44023151,44015155,44014537,44013155,44012236	Gene ID= ENSG00000091947.9 TPM= 15.93 Transcript Type= protein_coding
chr17	44034635	44067619	44034635	44067619	-	ENST00000591247.5@LSM12	ENST00000591247.5	protein_coding	44067443,44066464,44063801,44040147,44037412,44034635	44067619,44066733,44063934,44040256,44037538,44036300	Gene ID= ENSG00000161654.9 TPM= 96.66 Transcript Type= protein_coding
chr17	44070853	44076344	44070853	44076344	+	transcript3188.chr17.nic@G6PC3	transcript3188.chr17.nic	protein_coding	44070853,44074160,44074680,44075310,44075680	44071183,44074266,44074770,44075451,44076344	Gene ID= ENSG00000141349.8 TPM= 4.25 Transcript Type= NA
chr17	44070751	44076300	44070751	44076300	+	ENST00000585361.5@G6PC3	ENST00000585361.5	protein_coding	44070751,44074160,44074680,44074969,44075310,44075680	44071242,44074266,44074770,44075087,44075451,44076300	Gene ID= ENSG00000141349.8 TPM= 2.12 Transcript Type= nonsense_mediated_decay
chr17	44070735	44076304	44070735	44076304	+	ENST00000269097.8@G6PC3	ENST00000269097.8	protein_coding	44070735,44074160,44074680,44074969,44075310,44075680	44071183,44074266,44074770,44075087,44075451,44076304	Gene ID= ENSG00000141349.8 TPM= 14.87 Transcript Type= protein_coding
chr17	44078294	44123660	44078294	44123660	-	transcript3160.chr17.nic@HDAC5	transcript3160.chr17.nic	protein_coding	44123504,44117494,44110729,44093575,44093314,44093092,44092676,44092381,44092172,44091700,44091270,44088387,44087412,44086572,44085022,44084555,44083805,44083545,44082765,44082585,44080763,44080401,44080107,44079144,44078795,44078500,44078294	44123660,44117704,44110800,44093834,44093485,44093206,44092806,44092527,44092284,44091831,44091492,44088598,44087696,44086737,44085155,44084675,44083854,44083652,44082820,44082672,44080882,44080498,44080225,44079277,44078879,44078665,44078415	Gene ID= ENSG00000108840.15 TPM= 29.51 Transcript Type= NA
chr17	44078294	44111236	44078294	44111236	-	transcript3173.chr17.nic@HDAC5	transcript3173.chr17.nic	protein_coding	44110729,44093575,44093314,44093092,44092676,44092381,44092172,44091700,44091270,44088387,44087412,44086572,44085022,44084555,44083805,44083545,44082765,44082585,44080763,44080401,44080107,44079144,44078795,44078500,44078294	44111236,44093834,44093485,44093206,44092806,44092527,44092284,44091831,44091492,44088598,44087696,44086737,44085155,44084675,44083854,44083652,44082820,44082672,44080882,44080498,44080225,44079277,44078879,44078665,44078415	Gene ID= ENSG00000108840.15 TPM= 40.13 Transcript Type= NA
chr17	44076746	44123638	44076746	44123638	-	ENST00000225983.10@HDAC5	ENST00000225983.10	protein_coding	44123504,44117494,44110729,44093575,44093314,44093092,44092676,44092381,44092172,44091700,44091270,44088387,44087412,44086572,44085022,44084555,44083805,44083545,44082765,44082585,44080763,44080401,44080107,44079144,44078795,44078500,44076746	44123638,44117704,44110803,44093834,44093485,44093206,44092806,44092527,44092284,44091831,44091492,44088598,44087696,44086737,44085155,44084675,44083854,44083652,44082820,44082672,44080882,44080498,44080225,44079277,44078879,44078665,44078415	Gene ID= ENSG00000108840.15 TPM= 19.24 Transcript Type= protein_coding
chr17	44175978	44178423	44175978	44178423	-	transcript3258.chr17.nnic@NA	transcript3258.chr17.nnic	NA	44175978	44178423	Gene ID= novel_gene_chr17_3259 TPM= 5.31 Transcript Type= NA
chr17	44178489	44180411	44178489	44180411	-	transcript3260.chr17.nnic@NA	transcript3260.chr17.nnic	NA	44178489	44180411	Gene ID= novel_gene_chr17_3261 TPM= 2.66 Transcript Type= NA
chr17	44180197	44182365	44180197	44182365	+	transcript3250.chr17.nnic@NA	transcript3250.chr17.nnic	NA	44180197	44182365	Gene ID= novel_gene_chr17_3251 TPM= 9.03 Transcript Type= NA
chr17	44186972	44191726	44186972	44191726	+	transcript3229.chr17.nic@TMUB2	transcript3229.chr17.nic	protein_coding	44186972,44187676,44187907,44188935,44190501	44187109,44187743,44188009,44189588,44191726	Gene ID= ENSG00000168591.15 TPM= 4.23 Transcript Type= NA
chr17	44186972	44191726	44186972	44191726	+	transcript3230.chr17.nnic@TMUB2	transcript3230.chr17.nnic	protein_coding	44186972,44187676,44187907,44189022,44190501	44187109,44187743,44188009,44189588,44191726	Gene ID= ENSG00000168591.15 TPM= 4.23 Transcript Type= NA
chr17	44186986	44191730	44186986	44191730	+	ENST00000357984.7@TMUB2	ENST00000357984.7	protein_coding	44186986,44189022,44190501	44187109,44189588,44191730	Gene ID= ENSG00000168591.15 TPM= 3.17 Transcript Type= protein_coding
chr17	44187198	44191726	44187198	44191726	+	transcript3246.chr17.nic@TMUB2	transcript3246.chr17.nic	protein_coding	44187198,44189022,44190501	44187431,44189588,44191726	Gene ID= ENSG00000168591.15 TPM= 6.35 Transcript Type= NA
chr17	44187206	44191726	44187206	44191726	+	ENST00000319511.6@TMUB2	ENST00000319511.6	protein_coding	44187206,44188935,44190501	44187743,44189588,44191726	Gene ID= ENSG00000168591.15 TPM= 8.68 Transcript Type= protein_coding
chr17	44188851	44191725	44188851	44191725	+	ENST00000587326.1@TMUB2	ENST00000587326.1	protein_coding	44188851,44189424,44190501	44189299,44189588,44191725	Gene ID= ENSG00000168591.15 TPM= 2.45 Transcript Type= nonsense_mediated_decay
chr17	44186990	44191698	44186990	44191698	+	ENST00000538716.6@TMUB2	ENST00000538716.6	protein_coding	44186990,44187676,44189022,44190501	44187109,44187743,44189588,44191698	Gene ID= ENSG00000168591.15 TPM= 3.54 Transcript Type= protein_coding
chr17	44187050	44191731	44187050	44191731	+	ENST00000590235.5@TMUB2	ENST00000590235.5	protein_coding	44187050,44189022,44190501	44187109,44189299,44191731	Gene ID= ENSG00000168591.15 TPM= 1.92 Transcript Type= protein_coding
chr17	44187262	44191712	44187262	44191712	+	ENST00000589785.1@TMUB2	ENST00000589785.1	protein_coding	44187262,44189022,44190501	44187400,44189588,44191712	Gene ID= ENSG00000168591.15 TPM= 1.57 Transcript Type= protein_coding
chr17	44187231	44190191	44187231	44190191	+	transcript3256.chr17.nnic@NA	transcript3256.chr17.nnic	NA	44187231	44190191	Gene ID= novel_gene_chr17_3257 TPM= 2.12 Transcript Type= NA
chr17	44206594	44219117	44206594	44219117	-	transcript3200.chr17.nnic@UBTF	transcript3200.chr17.nnic	protein_coding	44218965,44218172,44216529,44215906,44215654,44213218,44212819,44212344,44211873,44211606,44211290,44211039,44210792,44210318,44210124,44209645,44209352,44207864,44207699,44207454,44206594	44219117,44218296,44216704,44215989,44215809,44213282,44212939,44212454,44212006,44211747,44211331,44211152,44210947,44210473,44210234,44209733,44209541,44207911,44207770,44207597,44207367	Gene ID= ENSG00000108312.14 TPM= 11.05 Transcript Type= NA
chr17	44206594	44220974	44206594	44220974	-	transcript3203.chr17.nic@UBTF	transcript3203.chr17.nic	protein_coding	44220740,44218172,44216529,44215906,44215654,44213218,44212819,44212344,44211873,44211606,44211290,44211039,44210792,44210318,44210124,44209645,44209352,44207864,44207699,44207454,44206594	44220974,44218296,44216704,44215989,44215809,44213282,44212939,44212454,44212006,44211747,44211331,44211152,44210947,44210473,44210234,44209733,44209541,44207911,44207770,44207597,44207367	Gene ID= ENSG00000108312.14 TPM= 17.42 Transcript Type= NA
chr17	44206594	44219172	44206594	44219172	-	transcript3205.chr17.nnic@UBTF	transcript3205.chr17.nnic	protein_coding	44218965,44218172,44216529,44215906,44215654,44213218,44212819,44211873,44211606,44211290,44211039,44210792,44210318,44210124,44209645,44209352,44207864,44207699,44207454,44206594	44219172,44218296,44216704,44215989,44215809,44213282,44212939,44212006,44211747,44211331,44211152,44210947,44210473,44210234,44209733,44209541,44207911,44207770,44207597,44207367	Gene ID= ENSG00000108312.14 TPM= 13.7 Transcript Type= NA
chr17	44206594	44221311	44206594	44221311	-	transcript3209.chr17.nic@UBTF	transcript3209.chr17.nic	protein_coding	44221201,44218172,44216529,44215906,44215654,44213218,44212819,44211873,44211606,44211290,44211039,44210792,44210318,44210124,44209645,44209352,44207864,44207699,44207454,44206594	44221311,44218296,44216704,44215989,44215809,44213282,44212939,44212006,44211747,44211331,44211152,44210947,44210473,44210234,44209733,44209541,44207911,44207770,44207597,44207367	Gene ID= ENSG00000108312.14 TPM= 10.52 Transcript Type= NA
chr17	44206594	44220854	44206594	44220854	-	ENST00000527034.5@UBTF	ENST00000527034.5	protein_coding	44220740,44218172,44216529,44215906,44215654,44213218,44212819,44211873,44211606,44211290,44211039,44210792,44210318,44210124,44209645,44209352,44207864,44207703,44207454,44206594	44220854,44218296,44216704,44215989,44215809,44213282,44212939,44212006,44211747,44211331,44211152,44210947,44210473,44210234,44209733,44209541,44207911,44207770,44207597,44207367	Gene ID= ENSG00000108312.14 TPM= 22.73 Transcript Type= protein_coding
chr17	44308559	44318671	44308559	44318671	+	ENST00000426726.7@RUNDC3A	ENST00000426726.7	protein_coding	44308559,44312580,44313104,44313418,44314735,44314929,44315155,44315452,44316385,44316619,44318096	44308939,44312695,44313252,44313503,44314824,44315009,44315320,44315609,44316522,44316725,44318671	Gene ID= ENSG00000108309.13 TPM= 1.06 Transcript Type= protein_coding
chr17	44319625	44324870	44319625	44324870	-	ENST00000225308.12@SLC25A39	ENST00000225308.12	protein_coding	44324711,44323478,44323284,44322808,44322419,44321700,44321434,44321058,44320622,44320355,44320196,44319625	44324870,44323577,44323343,44322852,44322528,44321767,44321558,44321231,44320731,44320436,44320276,44320116	Gene ID= ENSG00000013306.15 TPM= 98.25 Transcript Type= protein_coding
chr17	44319627	44324831	44319627	44324831	-	transcript3270.chr17.nic@SLC25A39	transcript3270.chr17.nic	protein_coding	44323478,44323284,44322808,44322419,44321700,44321434,44321058,44320622,44320355,44320196,44319627	44324831,44323343,44322852,44322528,44321767,44321558,44321231,44320731,44320436,44320276,44320116	Gene ID= ENSG00000013306.15 TPM= 12.66 Transcript Type= NA
chr17	44319636	44324815	44319636	44324815	-	ENST00000377095.9@SLC25A39	ENST00000377095.9	protein_coding	44324711,44323478,44323284,44322808,44322419,44321700,44321434,44321058,44320622,44320355,44320196,44319636	44324815,44323577,44323343,44322852,44322552,44321767,44321558,44321231,44320731,44320436,44320276,44320116	Gene ID= ENSG00000013306.15 TPM= 14.25 Transcript Type= protein_coding
chr17	44319642	44324809	44319642	44324809	-	ENST00000590194.5@SLC25A39	ENST00000590194.5	protein_coding	44324711,44323478,44323284,44322808,44322419,44321700,44321434,44321058,44320622,44320355,44320196,44319642	44324809,44323590,44323343,44322852,44322528,44321767,44321558,44321231,44320731,44320436,44320276,44320116	Gene ID= ENSG00000013306.15 TPM= 3.45 Transcript Type= protein_coding
chr17	44325429	44327530	44325429	44327530	+	transcript3282.chr17.nnic@NA	transcript3282.chr17.nnic	NA	44325429,44326942	44325621,44327530	Gene ID= novel_gene_chr17_3283 TPM= 3.19 Transcript Type= NA
chr17	44345086	44353102	44345086	44353102	+	ENST00000053867.7@GRN	ENST00000053867.7	protein_coding	44345086,44349158,44349426,44349667,44350228,44350442,44350691,44351037,44351363,44351550,44352015,44352341,44352661	44345334,44349302,44349551,44349751,44350340,44350577,44350800,44351163,44351460,44351795,44352248,44352571,44353102	Gene ID= ENSG00000030582.17 TPM= 344.67 Transcript Type= protein_coding
chr17	44353215	44363875	44353215	44363875	-	ENST00000293443.11@FAM171A2	ENST00000293443.11	protein_coding	44363597,44359905,44359579,44356430,44356173,44355958,44355715,44353215	44363875,44360132,44359671,44356588,44356352,44356074,44355841,44355191	Gene ID= ENSG00000161682.14 TPM= 2.12 Transcript Type= protein_coding
chr17	44372183	44389505	44372183	44389505	-	ENST00000262407.5@ITGA2B	ENST00000262407.5	protein_coding	44389286,44386010,44385824,44385551,44385286,44385164,44384948,44384538,44384311,44384085,44383894,44383493,44380879,44380600,44380386,44380246,44380002,44379689,44378643,44378362,44377698,44377009,44376308,44376085,44375833,44375591,44374998,44374659,44374354,44372183	44389505,44386131,44385921,44385716,44385335,44385209,44385076,44384585,44384354,44384138,44383946,44383704,44381061,44380645,44380490,44380301,44380153,44379814,44378710,44378509,44377790,44377088,44376388,44376184,44375985,44375716,44375111,44374760,44374470,44372423	Gene ID= ENSG00000005961.17 TPM= 2.12 Transcript Type= protein_coding
chr17	44396574	44436787	44396574	44436787	-	ENST00000635257.1@GPATCH8	ENST00000635257.1	protein_coding	44436478,44435065,44424349,44407217,44405921,44396574	44436787,44435151,44424492,44407266,44406051,44401453	Gene ID= ENSG00000186566.12 TPM= 5.31 Transcript Type= retained_intron
chr17	44557459	44559570	44557459	44559570	+	ENST00000315323.4@FZD2	ENST00000315323.4	protein_coding	44557459	44559570	Gene ID= ENSG00000180340.6 TPM= 7.44 Transcript Type= protein_coding
chr17	44677458	44689762	44677458	44689762	-	ENST00000315286.12@CCDC43	ENST00000315286.12	protein_coding	44689550,44683872,44682003,44680585,44677458	44689762,44683959,44682138,44680643,44679043	Gene ID= ENSG00000180329.13 TPM= 38.24 Transcript Type= protein_coding
chr17	44677440	44689779	44677440	44689779	-	ENST00000457422.6@CCDC43	ENST00000457422.6	protein_coding	44689550,44683872,44682003,44677440	44689779,44683959,44682138,44679043	Gene ID= ENSG00000180329.13 TPM= 10.62 Transcript Type= protein_coding
chr17	44804247	44830231	44804247	44830231	-	ENST00000592524.5@GJC1	ENST00000592524.5	protein_coding	44830062,44807394,44804247	44830231,44807469,44805837	Gene ID= ENSG00000182963.9 TPM= 6.37 Transcript Type= protein_coding
chr17	44847902	44850480	44847902	44850480	+	ENST00000253410.2@HIGD1B	ENST00000253410.2	protein_coding	44847902,44849254,44850332	44848252,44849388,44850480	Gene ID= ENSG00000131097.6 TPM= 2.12 Transcript Type= protein_coding
chr17	44849943	44899662	44849943	44899662	-	ENST00000426333.6@EFTUD2	ENST00000426333.6	protein_coding	44899369,44894417,44886585,44885256,44883649,44883093,44881687,44880554,44879556,44875934,44872446,44868287,44867807,44864930,44863655,44862713,44860432,44859905,44859080,44857075,44854918,44854556,44854269,44853517,44853296,44852409,44851710,44849943	44899662,44894525,44886750,44885334,44883724,44883158,44881722,44880644,44879638,44876100,44872570,44868350,44867897,44865065,44863782,44862906,44860543,44860045,44859181,44857157,44855004,44854682,44854356,44853635,44853390,44852562,44851817,44851369	Gene ID= ENSG00000108883.12 TPM= 7.44 Transcript Type= protein_coding
chr17	44850866	44899431	44850866	44899431	-	ENST00000592576.5@EFTUD2	ENST00000592576.5	protein_coding	44899369,44894417,44886585,44885256,44883649,44883093,44881687,44880554,44879556,44875934,44872446,44868287,44867807,44864930,44863655,44862713,44860432,44859905,44859080,44857075,44854918,44854556,44854269,44853517,44853296,44852409,44851710,44850866	44899431,44894525,44886750,44885334,44883724,44883128,44881722,44880644,44879638,44876100,44872570,44868350,44867897,44865065,44863782,44862906,44860543,44860045,44859181,44857157,44855004,44854682,44854356,44853635,44853390,44852562,44851817,44851369	Gene ID= ENSG00000108883.12 TPM= 80.72 Transcript Type= protein_coding
chr17	44909667	44911543	44909667	44911543	-	transcript3336.chr17.nic@GFAP	transcript3336.chr17.nic	protein_coding	44911236,44910615,44909667	44911543,44910658,44910260	Gene ID= ENSG00000131095.12 TPM= 3.19 Transcript Type= NA
chr17	45023346	45061109	45023346	45061109	-	ENST00000310604.8@DCAKD	ENST00000310604.8	protein_coding	45060888,45034774,45034187,45030092,45023346	45061109,45035002,45034390,45030179,45024724	Gene ID= ENSG00000172992.11 TPM= 23.37 Transcript Type= protein_coding
chr17	45051610	45109016	45051610	45109016	+	ENST00000592782.5@NMT1	ENST00000592782.5	protein_coding	45051610,45061283,45081644,45086508,45093685,45096194,45097128,45098382,45099405,45102951,45103709,45104859,45105619	45051693,45061460,45081752,45086652,45093803,45096285,45097244,45098552,45099513,45103121,45103876,45104996,45109016	Gene ID= ENSG00000136448.11 TPM= 86.04 Transcript Type= protein_coding
chr17	45111649	45132544	45111649	45132544	-	transcript3348.chr17.nnic@PLCD3	transcript3348.chr17.nnic	protein_coding	45132248,45121211,45120902,45120325,45118815,45118291,45117994,45116632,45115344,45115094,45114250,45113439,45113122,45112863,45111649	45132544,45121372,45121130,45120454,45119043,45118492,45118138,45116784,45115490,45115244,45114501,45113605,45113257,45113012,45112704	Gene ID= ENSG00000161714.11 TPM= 28.68 Transcript Type= NA
chr17	45132631	45144176	45132631	45144176	+	ENST00000591859.5@ACBD4	ENST00000591859.5	protein_coding	45132631,45135341,45135839,45136108,45136500,45136692,45137019,45137368,45137722,45137913,45139021,45143443	45132663,45135592,45135953,45136232,45136620,45136776,45137139,45137454,45137830,45137988,45139160,45144176	Gene ID= ENSG00000181513.14 TPM= 2.12 Transcript Type= protein_coding
chr17	45135687	45144181	45135687	45144181	+	ENST00000398322.7@ACBD4	ENST00000398322.7	protein_coding	45135687,45136500,45136692,45137019,45137368,45137760,45137913,45139021,45143443	45136232,45136620,45136776,45137139,45137454,45137830,45137988,45139160,45144181	Gene ID= ENSG00000181513.14 TPM= 2.12 Transcript Type= protein_coding
chr17	45148502	45152101	45148502	45152101	+	ENST00000332499.3@HEXIM1	ENST00000332499.3	protein_coding	45148502	45152101	Gene ID= ENSG00000186834.3 TPM= 14.87 Transcript Type= protein_coding
chr17	45159591	45161553	45159591	45161553	-	transcript3367.chr17.nnic@NA	transcript3367.chr17.nnic	NA	45159591	45161553	Gene ID= novel_gene_chr17_3368 TPM= 3.19 Transcript Type= NA
chr17	45160700	45170040	45160700	45170040	+	ENST00000307275.7@HEXIM2	ENST00000307275.7	protein_coding	45160700,45162488,45162750,45169015	45160943,45162635,45162859,45170040	Gene ID= ENSG00000168517.10 TPM= 1.41 Transcript Type= protein_coding
chr17	45161895	45170035	45161895	45170035	+	ENST00000591576.5@HEXIM2	ENST00000591576.5	protein_coding	45161895,45162750,45169015	45161939,45162859,45170035	Gene ID= ENSG00000168517.10 TPM= 1.41 Transcript Type= protein_coding
chr17	45161917	45170035	45161917	45170035	+	ENST00000592695.1@HEXIM2	ENST00000592695.1	protein_coding	45161917,45162750,45169015	45162031,45162859,45170035	Gene ID= ENSG00000168517.10 TPM= 1.41 Transcript Type= protein_coding
chr17	45168800	45171485	45168800	45171485	-	ENST00000589796.2@AC138150.2	ENST00000589796.2	antisense_RNA	45170964,45168800	45171485,45170330	Gene ID= ENSG00000267288.2 TPM= 1.06 Transcript Type= antisense_RNA
chr17	45219350	45222222	45219350	45222222	-	ENST00000591365.1@AC008105.3	ENST00000591365.1	antisense_RNA	45220268,45219350	45222222,45219632	Gene ID= ENSG00000267121.5 TPM= 1.06 Transcript Type= antisense_RNA
chr17	45241075	45247318	45241075	45247318	+	ENST00000587489.5@FMNL1	ENST00000587489.5	protein_coding	45241075,45241382,45241847,45242341,45243118,45243791,45244176,45244819,45244979,45245253,45245632,45245878,45246210,45246867	45241230,45241634,45242146,45242465,45243320,45244025,45244244,45244899,45245108,45245416,45245733,45245973,45246330,45247318	Gene ID= ENSG00000184922.13 TPM= 4.25 Transcript Type= protein_coding
chr17	45247267	45247843	45247267	45247843	-	ENST00000589518.1@AC008105.2	ENST00000589518.1	antisense_RNA	45247701,45247267	45247843,45247516	Gene ID= ENSG00000233483.2 TPM= 1.06 Transcript Type= antisense_RNA
chr17	45288380	45317032	45288380	45317032	-	transcript3385.chr17.nic@MAP3K14	transcript3385.chr17.nic	protein_coding	45316960,45288380	45317032,45290765	Gene ID= ENSG00000006062.14 TPM= 3.19 Transcript Type= NA
chr17	45263121	45317040	45263121	45317040	-	ENST00000344686.6@MAP3K14	ENST00000344686.6	protein_coding	45316960,45290490,45289236,45287154,45286431,45284812,45274464,45274123,45273503,45271058,45270413,45267406,45267092,45266537,45265163,45263121	45317040,45290765,45289305,45287364,45287045,45284949,45274593,45274254,45273607,45271221,45270563,45267759,45267198,45266681,45265263,45264800	Gene ID= ENSG00000006062.14 TPM= 23.37 Transcript Type= protein_coding
chr17	45393902	45410424	45393902	45410424	-	ENST00000532038.5@ARHGAP27	ENST00000532038.5	protein_coding	45410232,45405676,45404924,45404601,45404445,45404029,45403619,45402714,45397949,45396916,45396668,45396487,45396207,45395983,45395744,45393902	45410424,45406083,45405106,45404681,45404528,45404096,45403709,45402818,45398047,45397024,45396790,45396585,45396284,45396117,45395849,45395633	Gene ID= ENSG00000159314.11 TPM= 8.15 Transcript Type= protein_coding
chr17	45393909	45425804	45393909	45425804	-	transcript3391.chr17.nic@ARHGAP27	transcript3391.chr17.nic	protein_coding	45425564,45405676,45404924,45404601,45404445,45404029,45403619,45402714,45397949,45396916,45396668,45396487,45396207,45395983,45395744,45393909	45425804,45406083,45405106,45404681,45404528,45404096,45403709,45402818,45398047,45397024,45396790,45396585,45396284,45396117,45395849,45395633	Gene ID= ENSG00000159314.11 TPM= 9.21 Transcript Type= NA
chr17	45393909	45425631	45393909	45425631	-	ENST00000376922.6@ARHGAP27	ENST00000376922.6	protein_coding	45425564,45405676,45404924,45404601,45404445,45404269,45404029,45403619,45402714,45397949,45396916,45396668,45396487,45396207,45395983,45395744,45393909	45425631,45406083,45405106,45404681,45404528,45404334,45404096,45403709,45402818,45398047,45397024,45396790,45396585,45396284,45396117,45395849,45395633	Gene ID= ENSG00000159314.11 TPM= 6.02 Transcript Type= protein_coding
chr17	45435900	45490744	45435900	45490744	-	ENST00000430334.7@PLEKHM1	ENST00000430334.7	protein_coding	45490652,45482437,45477900,45475100,45468209,45458169,45453355,45450618,45445470,45440163,45439477,45435900	45490744,45482525,45478147,45475726,45468593,45458439,45454272,45450763,45445663,45440226,45439634,45437969	Gene ID= ENSG00000225190.10 TPM= 19.12 Transcript Type= protein_coding
chr17	45475840	45479535	45475840	45479535	+	transcript3408.chr17.nnic@NA	transcript3408.chr17.nnic	NA	45475840	45479535	Gene ID= novel_gene_chr17_3409 TPM= 4.25 Transcript Type= NA
chr17	45578694	45582980	45578694	45582980	+	transcript3410.chr17.nnic@NA	transcript3410.chr17.nnic	NA	45578694	45582980	Gene ID= novel_gene_chr17_3411 TPM= 3.19 Transcript Type= NA
chr17	45894382	46028334	45894382	46028334	+	ENST00000340799.9@MAPT	ENST00000340799.9	protein_coding	45894382,45962321,45971859,45978375,45987040,45991460,45996399,46010310,46014243,46018618,46023956	45894686,45962470,45971945,45978440,45987095,45991586,45996664,46010402,46014324,46018730,46028334	Gene ID= ENSG00000186868.15 TPM= 36.11 Transcript Type= protein_coding
chr17	45894532	45964718	45894532	45964718	+	transcript3419.chr17.nnic@MAPT	transcript3419.chr17.nnic	protein_coding	45894532,45962321,45964397	45894686,45962470,45964718	Gene ID= ENSG00000186868.15 TPM= 3.19 Transcript Type= NA
chr17	45982342	45985309	45982342	45985309	+	transcript3420.chr17.nnic@NA	transcript3420.chr17.nnic	NA	45982342	45985309	Gene ID= novel_gene_chr17_3421 TPM= 3.19 Transcript Type= NA
chr17	46030764	46031313	46030764	46031313	+	transcript3429.chr17.nnic@NA	transcript3429.chr17.nnic	NA	46030764	46031313	Gene ID= novel_gene_chr17_3430 TPM= 3.19 Transcript Type= NA
chr17	46113130	46113619	46113130	46113619	+	transcript3431.chr17.nnic@NA	transcript3431.chr17.nnic	NA	46113130	46113619	Gene ID= novel_gene_chr17_3432 TPM= 2.12 Transcript Type= NA
chr17	46193576	46196721	46193576	46196721	+	ENST00000398275.4@KANSL1-AS1	ENST00000398275.4	antisense_RNA	46193576,46196368	46193738,46196721	Gene ID= ENSG00000214401.4 TPM= 3.19 Transcript Type= antisense_RNA
chr17	46221051	46223807	46221051	46223807	-	transcript3433.chr17.nnic@NA	transcript3433.chr17.nnic	NA	46221051	46223807	Gene ID= novel_gene_chr17_3434 TPM= 2.12 Transcript Type= NA
chr17	46339397	46361764	46339397	46361764	-	ENST00000450673.3@ARL17B	ENST00000450673.3	protein_coding	46361676,46358250,46352820,46339397	46361764,46358414,46352930,46339774	Gene ID= ENSG00000228696.8 TPM= 2.12 Transcript Type= protein_coding
chr17	46590669	46757464	46590669	46757464	+	ENST00000398238.8@NSF	ENST00000398238.8	protein_coding	46590669,46624244,46626613,46630411,46637376,46640054,46640643,46643104,46674414,46692903,46693847,46694475,46704759,46710963,46713853,46726549,46728855,46749773,46751503,46755314,46755802	46590787,46624329,46626712,46630450,46637542,46640161,46640718,46643259,46674613,46693068,46693921,46694662,46704854,46711119,46713986,46726615,46728934,46749907,46751616,46755369,46757464	Gene ID= ENSG00000073969.18 TPM= 36.11 Transcript Type= protein_coding
chr17	46590755	46714285	46590755	46714285	+	transcript3455.chr17.nic@NSF	transcript3455.chr17.nic	protein_coding	46590755,46624244,46626613,46630411,46637376,46640054,46640643,46643104,46674414,46692903,46693847,46694475,46704759,46710963,46713853	46590787,46624329,46626712,46630450,46637542,46640161,46640718,46643259,46674613,46693068,46693921,46694662,46704854,46711119,46714285	Gene ID= ENSG00000073969.18 TPM= 2.12 Transcript Type= NA
chr17	46923146	46941600	46923146	46941600	+	ENST00000638216.1@GOSR2	ENST00000638216.1	protein_coding	46923146,46929520,46931099,46932067,46935029,46938599	46923269,46929584,46931207,46932199,46935169,46941600	Gene ID= ENSG00000108433.16 TPM= 2.12 Transcript Type= protein_coding
chr17	46923075	46942015	46923075	46942015	+	ENST00000640608.1@GOSR2	ENST00000640608.1	protein_coding	46923075,46929520,46931099,46932067,46938599	46923221,46929584,46931207,46932199,46942015	Gene ID= ENSG00000108433.16 TPM= 12.75 Transcript Type= protein_coding
chr17	46923128	46967000	46923128	46967000	+	ENST00000573224.2@GOSR2	ENST00000573224.2	protein_coding	46923128,46929520,46931099,46932067,46935029,46938599,46966534	46923221,46929584,46931207,46932199,46935169,46938704,46967000	Gene ID= ENSG00000108433.16 TPM= 1.06 Transcript Type= protein_coding
chr17	46933633	46937569	46933633	46937569	-	transcript3478.chr17.nnic@NA	transcript3478.chr17.nnic	NA	46933633	46937569	Gene ID= novel_gene_chr17_3479 TPM= 6.37 Transcript Type= NA
chr17	47068449	47070050	47068449	47070050	-	transcript3492.chr17.nnic@NA	transcript3492.chr17.nnic	NA	47068449	47070050	Gene ID= novel_gene_chr17_3493 TPM= 2.12 Transcript Type= NA
chr17	47068595	47072272	47068595	47072272	-	transcript3494.chr17.nnic@NA	transcript3494.chr17.nnic	NA	47068595	47072272	Gene ID= novel_gene_chr17_3495 TPM= 2.12 Transcript Type= NA
chr17	47176715	47178566	47176715	47178566	+	transcript3502.chr17.nnic@NA	transcript3502.chr17.nnic	NA	47176715	47178566	Gene ID= novel_gene_chr17_3503 TPM= 2.12 Transcript Type= NA
chr17	47209062	47223678	47209062	47223678	+	ENST00000354968.5@MYL4	ENST00000354968.5	protein_coding	47209062,47209389,47213799,47219904,47221682,47222380,47223014,47223509	47209155,47209557,47213826,47220053,47221855,47222457,47223057,47223678	Gene ID= ENSG00000198336.9 TPM= 6.37 Transcript Type= protein_coding
chr17	47209028	47223679	47209028	47223679	+	transcript3510.chr17.nic@MYL4	transcript3510.chr17.nic	protein_coding	47209028,47213799,47219904,47221682,47222380,47223014,47223509	47209557,47213919,47220053,47221855,47222457,47223057,47223679	Gene ID= ENSG00000198336.9 TPM= 2.66 Transcript Type= NA
chr17	47219522	47223679	47219522	47223679	+	transcript3511.chr17.nnic@MYL4	transcript3511.chr17.nnic	protein_coding	47219522,47219904,47221682,47222380,47223014,47223509	47219748,47220053,47221855,47222457,47223057,47223679	Gene ID= ENSG00000198336.9 TPM= 2.12 Transcript Type= NA
chr17	47209035	47223658	47209035	47223658	+	ENST00000572316.5@MYL4	ENST00000572316.5	protein_coding	47209035,47209389,47213799,47219904,47221682,47222380,47223014,47223509	47209091,47209557,47213826,47220053,47221855,47222457,47223057,47223658	Gene ID= ENSG00000198336.9 TPM= 10.62 Transcript Type= protein_coding
chr17	47209348	47223679	47209348	47223679	+	ENST00000393450.5@MYL4	ENST00000393450.5	protein_coding	47209348,47213799,47219904,47221682,47222380,47223014,47223509	47209557,47213826,47220053,47221855,47222457,47223057,47223679	Gene ID= ENSG00000198336.9 TPM= 31.33 Transcript Type= protein_coding
chr17	47531075	47624821	47531075	47624821	+	transcript3522.chr17.nnic@NPEPPS	transcript3522.chr17.nnic	protein_coding	47531075,47545909,47569417,47579390,47582742,47585500,47586148,47586365,47587230,47590717,47591956,47592485,47596353,47599676,47601608,47603915,47605333,47612460,47613669,47618350,47619009,47619737,47621768,47623797	47531555,47545993,47569494,47579511,47582849,47585700,47586244,47586398,47587344,47590881,47592060,47592545,47596462,47599739,47601747,47604049,47605552,47612602,47613725,47618457,47619164,47619784,47621970,47624821	Gene ID= ENSG00000141279.15 TPM= 6.37 Transcript Type= NA
chr17	47531064	47623276	47531064	47623276	+	ENST00000322157.8@NPEPPS	ENST00000322157.8	protein_coding	47531064,47545909,47569417,47579390,47582742,47585500,47586148,47586365,47587230,47590717,47591956,47592485,47596353,47599676,47601608,47603915,47605333,47612460,47613669,47618350,47619009,47619737,47621768	47531555,47545993,47569494,47579511,47582849,47585700,47586244,47586398,47587344,47590881,47592060,47592545,47596462,47599739,47601747,47604049,47605552,47612602,47613725,47618457,47619164,47619784,47623276	Gene ID= ENSG00000141279.15 TPM= 43.55 Transcript Type= protein_coding
chr17	47649838	47685505	47649838	47685505	+	ENST00000290158.8@KPNB1	ENST00000290158.8	protein_coding	47649838,47650386,47652694,47656860,47658508,47661119,47663089,47664159,47665057,47668186,47669678,47670702,47673018,47673490,47674638,47676409,47677020,47678046,47678308,47680020,47680508,47682404	47650284,47650444,47652876,47657060,47658660,47661178,47663178,47664269,47665158,47668410,47669869,47670832,47673165,47673561,47674782,47676491,47677127,47678189,47678413,47680134,47680669,47685505	Gene ID= ENSG00000108424.9 TPM= 44.61 Transcript Type= protein_coding
chr17	47695264	47712050	47695264	47712050	+	ENST00000361722.7@TBKBP1	ENST00000361722.7	protein_coding	47695264,47696711,47697089,47698595,47699320,47699636,47708394,47708725,47710498	47696337,47696833,47697193,47698775,47699495,47699697,47708512,47709452,47712050	Gene ID= ENSG00000198933.9 TPM= 14.87 Transcript Type= protein_coding
chr17	47807372	47821770	47807372	47821770	-	ENST00000007414.7@OSBPL7	ENST00000007414.7	protein_coding	47821666,47820204,47819971,47819729,47818986,47818506,47818269,47817256,47816780,47816563,47816388,47816107,47815215,47814521,47813587,47813266,47810772,47810594,47809334,47809076,47808864,47808538,47807372	47821770,47820365,47820096,47819782,47819099,47818616,47818386,47817359,47816872,47816695,47816482,47816202,47815352,47814614,47813834,47813403,47810835,47810672,47809478,47809220,47808990,47808660,47808399	Gene ID= ENSG00000006025.11 TPM= 1.06 Transcript Type= protein_coding
chr17	47823461	47831530	47823461	47831530	-	transcript3543.chr17.nnic@MRPL10	transcript3543.chr17.nnic	protein_coding	47831460,47829764,47829139,47828501,47827040,47826637,47823461	47831530,47829887,47829236,47828670,47827204,47826781,47824458	Gene ID= ENSG00000159111.12 TPM= 56.29 Transcript Type= NA
chr17	47823490	47831534	47823490	47831534	-	ENST00000414011.1@MRPL10	ENST00000414011.1	protein_coding	47831460,47829139,47828501,47827040,47826637,47823490	47831534,47829236,47828670,47827204,47826781,47824458	Gene ID= ENSG00000159111.12 TPM= 13.81 Transcript Type= protein_coding
chr17	47831627	47837713	47831627	47837713	+	ENST00000269025.8@LRRC46	ENST00000269025.8	protein_coding	47831627,47832100,47834425,47835353,47835666,47836033,47836333,47836750	47831999,47832205,47834533,47835399,47835775,47836102,47836475,47837713	Gene ID= ENSG00000141294.9 TPM= 1.06 Transcript Type= protein_coding
chr17	47837700	47841333	47837700	47841333	-	ENST00000290216.13@SCRN2	ENST00000290216.13	protein_coding	47841208,47840670,47840191,47839444,47838791,47838531,47838270,47837700	47841333,47840843,47840372,47839643,47839006,47838696,47838450,47838002	Gene ID= ENSG00000141295.13 TPM= 59.48 Transcript Type= protein_coding
chr17	47837692	47841289	47837692	47841289	-	ENST00000407215.7@SCRN2	ENST00000407215.7	protein_coding	47841208,47840670,47840191,47839444,47838791,47838531,47837692	47841289,47840843,47840372,47839643,47839006,47838696,47838450	Gene ID= ENSG00000141295.13 TPM= 7.44 Transcript Type= protein_coding
chr17	47837707	47841173	47837707	47841173	-	ENST00000584123.5@SCRN2	ENST00000584123.5	protein_coding	47840670,47840191,47839444,47838791,47838531,47838270,47837707	47841173,47840372,47839643,47839006,47838696,47838450,47838002	Gene ID= ENSG00000141295.13 TPM= 4.25 Transcript Type= protein_coding
chr17	47891255	47895812	47891255	47895812	-	ENST00000582787.1@AC018521.5	ENST00000582787.1	processed_transcript	47895703,47893900,47891255	47895812,47893958,47891581	Gene ID= ENSG00000264920.1 TPM= 22.31 Transcript Type= lincRNA
chr17	47898274	47941410	47898274	47941410	-	ENST00000451140.6@SP2-AS1	ENST00000451140.6	antisense_RNA	47941336,47918452,47898274	47941410,47918571,47899303	Gene ID= ENSG00000234494.7 TPM= 1.06 Transcript Type= antisense_RNA
chr17	47941523	47949308	47941523	47949308	+	ENST00000642017.1@PNPO	ENST00000642017.1	protein_coding	47941523,47943306,47944616,47945559,47945861,47946323,47946614	47941813,47943430,47944715,47945612,47945989,47946393,47949308	Gene ID= ENSG00000108439.10 TPM= 44.08 Transcript Type= protein_coding
chr17	47941548	47949287	47941548	47949287	+	ENST00000641323.1@PNPO	ENST00000641323.1	protein_coding	47941548,47943306,47944616,47945559,47945861,47946323,47946614	47942051,47943430,47944715,47945612,47945989,47946393,47949287	Gene ID= ENSG00000108439.10 TPM= 6.9 Transcript Type= nonsense_mediated_decay
chr17	47971127	47981772	47971127	47981772	+	transcript3587.chr17.nic@AC018521.1	transcript3587.chr17.nic	processed_transcript	47971127,47973519,47973931,47974400,47975514,47976712,47977832,47978829,47980593,47981163,47981437	47971407,47973650,47974031,47975337,47976013,47976822,47977910,47978917,47980798,47981334,47981772	Gene ID= ENSG00000263798.2 TPM= 2.66 Transcript Type= NA
chr17	47971026	47981772	47971026	47981772	+	transcript3586.chr17.nic@CDK5RAP3	transcript3586.chr17.nic	protein_coding	47971026,47971362,47973519,47974400,47975514,47976712,47977832,47978829,47980593,47981163,47981437	47971152,47971407,47974031,47975337,47976013,47976822,47977910,47978917,47980798,47981334,47981772	Gene ID= ENSG00000108465.14 TPM= 3.72 Transcript Type= NA
chr17	47971041	47981741	47971041	47981741	+	ENST00000338399.8@CDK5RAP3	ENST00000338399.8	protein_coding	47971041,47971362,47973519,47973931,47974400,47975159,47975514,47975869,47976712,47977832,47978829,47980593,47981163,47981437	47971152,47971407,47973650,47974031,47974448,47975337,47975653,47976013,47976822,47977910,47978917,47980798,47981334,47981741	Gene ID= ENSG00000108465.14 TPM= 3.19 Transcript Type= protein_coding
chr17	47971104	47981772	47971104	47981772	+	ENST00000584063.5@CDK5RAP3	ENST00000584063.5	protein_coding	47971104,47971362,47973519,47973931,47974400,47975514,47976712,47977832,47978829,47980593,47981163,47981437	47971152,47971407,47973650,47974031,47975337,47976013,47976822,47977910,47978917,47980798,47981334,47981772	Gene ID= ENSG00000108465.14 TPM= 4.78 Transcript Type= retained_intron
chr17	47971125	47981768	47971125	47981768	+	ENST00000585163.5@CDK5RAP3	ENST00000585163.5	protein_coding	47971125,47971362,47973519,47973931,47974400,47975514,47975869,47976712,47977832,47978829,47980593,47981163,47981437	47971152,47971407,47973650,47974031,47975337,47975653,47976013,47976822,47977910,47978917,47980798,47981334,47981768	Gene ID= ENSG00000108465.14 TPM= 4.78 Transcript Type= retained_intron
chr17	48026167	48037834	48026167	48037834	-	transcript3591.chr17.nic@COPZ2	transcript3591.chr17.nic	protein_coding	48037667,48036851,48033863,48033211,48032686,48032156,48029125,48028472,48027676,48026167	48037834,48036925,48033944,48033302,48032741,48032233,48029176,48028510,48027789,48026475	Gene ID= ENSG00000005243.9 TPM= 10.77 Transcript Type= NA
chr17	48026167	48037779	48026167	48037779	-	transcript3593.chr17.nnic@COPZ2	transcript3593.chr17.nnic	protein_coding	48037426,48036851,48033863,48033211,48032686,48032156,48029125,48028472,48026167	48037779,48036925,48033944,48033302,48032741,48032233,48029176,48028510,48026475	Gene ID= ENSG00000005243.9 TPM= 2.27 Transcript Type= NA
chr17	48026167	48037820	48026167	48037820	-	transcript3595.chr17.nnic@COPZ2	transcript3595.chr17.nnic	protein_coding	48037667,48033863,48033211,48032686,48032156,48029125,48028472,48026167	48037820,48033944,48033302,48032741,48032233,48029176,48028510,48026475	Gene ID= ENSG00000005243.9 TPM= 2.43 Transcript Type= NA
chr17	48026167	48037775	48026167	48037775	-	transcript3596.chr17.nic@COPZ2	transcript3596.chr17.nic	protein_coding	48037667,48036851,48033863,48032686,48032156,48029125,48028472,48026167	48037775,48036925,48033944,48032741,48032233,48029176,48028510,48026475	Gene ID= ENSG00000005243.9 TPM= 2.43 Transcript Type= NA
chr17	48026167	48037834	48026167	48037834	-	transcript3597.chr17.nic@COPZ2	transcript3597.chr17.nic	protein_coding	48037667,48036851,48033863,48033211,48032686,48029125,48028472,48026167	48037834,48036925,48033944,48033302,48032741,48029176,48028510,48026475	Gene ID= ENSG00000005243.9 TPM= 3.49 Transcript Type= NA
chr17	48026182	48037834	48026182	48037834	-	transcript3599.chr17.nic@COPZ2	transcript3599.chr17.nic	protein_coding	48037667,48036851,48033863,48033211,48032686,48032156,48029125,48026182	48037834,48036925,48033944,48033302,48032741,48032233,48029176,48026475	Gene ID= ENSG00000005243.9 TPM= 2.12 Transcript Type= NA
chr17	48026167	48037834	48026167	48037834	-	transcript3600.chr17.nic@COPZ2	transcript3600.chr17.nic	protein_coding	48037667,48036851,48033863,48032686,48029125,48028472,48026167	48037834,48036925,48033944,48032741,48029176,48028510,48026475	Gene ID= ENSG00000005243.9 TPM= 2.43 Transcript Type= NA
chr17	48026167	48037834	48026167	48037834	-	transcript3604.chr17.nnic@COPZ2	transcript3604.chr17.nnic	protein_coding	48037667,48036851,48033863,48029125,48028472,48026167	48037834,48036925,48033944,48029176,48028510,48026475	Gene ID= ENSG00000005243.9 TPM= 2.43 Transcript Type= NA
chr17	48031646	48037834	48031646	48037834	-	transcript3605.chr17.nic@COPZ2	transcript3605.chr17.nic	protein_coding	48037667,48036851,48033863,48033211,48032686,48031646	48037834,48036925,48033944,48033302,48032741,48032233	Gene ID= ENSG00000005243.9 TPM= 10.62 Transcript Type= NA
chr17	48031646	48037834	48031646	48037834	-	transcript3607.chr17.nic@COPZ2	transcript3607.chr17.nic	protein_coding	48037667,48036851,48033863,48032686,48031646	48037834,48036925,48033944,48032741,48032233	Gene ID= ENSG00000005243.9 TPM= 2.12 Transcript Type= NA
chr17	48036106	48037834	48036106	48037834	-	transcript3609.chr17.nnic@COPZ2	transcript3609.chr17.nnic	protein_coding	48037667,48036851,48036106	48037834,48036925,48036255	Gene ID= ENSG00000005243.9 TPM= 2.12 Transcript Type= NA
chr17	48026171	48037782	48026171	48037782	-	ENST00000621465.4@COPZ2	ENST00000621465.4	protein_coding	48037667,48036851,48033863,48033211,48032686,48032156,48029125,48028472,48026171	48037782,48036925,48033944,48033302,48032741,48032233,48029176,48028510,48026475	Gene ID= ENSG00000005243.9 TPM= 51.29 Transcript Type= protein_coding
chr17	48026182	48037773	48026182	48037773	-	ENST00000612370.4@COPZ2	ENST00000612370.4	protein_coding	48037667,48036851,48029125,48026182	48037773,48036925,48029176,48026475	Gene ID= ENSG00000005243.9 TPM= 1.06 Transcript Type= processed_transcript
chr17	48048752	48060952	48048752	48060952	+	transcript3616.chr17.nic@NFE2L1	transcript3616.chr17.nic	protein_coding	48048752,48050607,48056386,48057032,48057344,48058295	48048864,48051628,48056598,48057121,48057502,48060952	Gene ID= ENSG00000082641.15 TPM= 16.64 Transcript Type= NA
chr17	48048309	48061480	48048309	48061480	+	transcript3620.chr17.nic@NFE2L1	transcript3620.chr17.nic	protein_coding	48048309,48050607,48056419,48057344,48058295	48048462,48051628,48056598,48057502,48061480	Gene ID= ENSG00000082641.15 TPM= 55.37 Transcript Type= NA
chr17	48048752	48061480	48048752	48061480	+	transcript3623.chr17.nic@NFE2L1	transcript3623.chr17.nic	protein_coding	48048752,48050607,48056386,48057344,48058295	48048864,48051628,48056598,48057502,48061480	Gene ID= ENSG00000082641.15 TPM= 65.46 Transcript Type= NA
chr17	48048359	48061480	48048359	48061480	+	ENST00000362042.7@NFE2L1	ENST00000362042.7	protein_coding	48048359,48050607,48056386,48057032,48057344,48058295	48048462,48051628,48056598,48057121,48057502,48061480	Gene ID= ENSG00000082641.15 TPM= 67.42 Transcript Type= protein_coding
chr17	48048370	48061479	48048370	48061479	+	ENST00000357480.9@NFE2L1	ENST00000357480.9	protein_coding	48048370,48050607,48056386,48057344,48058295	48048462,48051628,48056598,48057502,48061479	Gene ID= ENSG00000082641.15 TPM= 93.08 Transcript Type= protein_coding
chr17	48048773	48061480	48048773	48061480	+	ENST00000361665.7@NFE2L1	ENST00000361665.7	protein_coding	48048773,48050607,48056419,48057032,48057344,48058295	48048864,48051628,48056598,48057121,48057502,48061480	Gene ID= ENSG00000082641.15 TPM= 52.55 Transcript Type= protein_coding
chr17	48070052	48101521	48070052	48101521	-	ENST00000225603.8@CBX1	ENST00000225603.8	protein_coding	48101268,48076865,48076001,48075006,48070052	48101521,48077041,48076178,48075100,48071579	Gene ID= ENSG00000108468.14 TPM= 5.31 Transcript Type= protein_coding
chr17	48070052	48101198	48070052	48101198	-	ENST00000393408.7@CBX1	ENST00000393408.7	protein_coding	48100755,48076865,48076001,48075006,48070052	48101198,48077041,48076178,48075100,48071579	Gene ID= ENSG00000108468.14 TPM= 1.06 Transcript Type= protein_coding
chr17	48107542	48122743	48107542	48122743	+	transcript3636.chr17.nic@SNX11	transcript3636.chr17.nic	protein_coding	48107542,48112031,48112574,48113301,48118704,48118974,48121235	48107596,48112085,48112660,48113401,48118799,48119186,48122743	Gene ID= ENSG00000002919.14 TPM= 2.12 Transcript Type= NA
chr17	48107585	48122743	48107585	48122743	+	ENST00000359238.6@SNX11	ENST00000359238.6	protein_coding	48107585,48112031,48112574,48113301,48118704,48118974,48121235	48107838,48112085,48112660,48113401,48118799,48119186,48122743	Gene ID= ENSG00000002919.14 TPM= 15.93 Transcript Type= protein_coding
chr17	48542655	48543969	48542655	48543969	-	transcript3641.chr17.nnic@HOXB2	transcript3641.chr17.nnic	protein_coding	48543894,48542655	48543969,48543747	Gene ID= ENSG00000173917.10 TPM= 4.25 Transcript Type= NA
chr17	48542655	48544989	48542655	48544989	-	ENST00000330070.5@HOXB2	ENST00000330070.5	protein_coding	48544521,48542655	48544989,48543747	Gene ID= ENSG00000173917.10 TPM= 2.12 Transcript Type= protein_coding
chr17	48546541	48548464	48546541	48548464	+	transcript3645.chr17.nic@HOXB-AS1	transcript3645.chr17.nic	antisense_RNA	48546541,48548375	48546739,48548464	Gene ID= ENSG00000230148.8 TPM= 2.12 Transcript Type= NA
chr17	48575513	48580111	48575513	48580111	-	ENST00000332503.5@HOXB4	ENST00000332503.5	protein_coding	48577863,48575513	48580111,48577020	Gene ID= ENSG00000182742.5 TPM= 2.12 Transcript Type= protein_coding
chr17	48831036	48863876	48831036	48863876	+	transcript3651.chr17.nic@CALCOCO2	transcript3651.chr17.nic	protein_coding	48831036,48839376,48841698,48848064,48848322,48849252,48851089,48851559,48852506,48852926,48856092,48860314,48862276,48862838	48831078,48839511,48841887,48848166,48848455,48849377,48851177,48851628,48852628,48853012,48856187,48860449,48862304,48863876	Gene ID= ENSG00000136436.14 TPM= 14.87 Transcript Type= NA
chr17	48830988	48865245	48830988	48865245	+	ENST00000258947.7@CALCOCO2	ENST00000258947.7	protein_coding	48830988,48841698,48848064,48848322,48849252,48851089,48851559,48852506,48852926,48856092,48860314,48862276,48862838	48831078,48841887,48848166,48848455,48849377,48851177,48851628,48852628,48853012,48856187,48860449,48862304,48865245	Gene ID= ENSG00000136436.14 TPM= 9.56 Transcript Type= protein_coding
chr17	48867328	48868211	48867328	48868211	+	transcript3669.chr17.nnic@NA	transcript3669.chr17.nnic	NA	48867328	48868211	Gene ID= novel_gene_chr17_3670 TPM= 2.12 Transcript Type= NA
chr17	48871982	48874497	48871982	48874497	+	transcript3671.chr17.nnic@NA	transcript3671.chr17.nnic	NA	48871982	48874497	Gene ID= novel_gene_chr17_3672 TPM= 4.25 Transcript Type= NA
chr17	48892765	48895871	48892765	48895871	+	ENST00000355938.9@ATP5G1	ENST00000355938.9	protein_coding	48892765,48893409,48894372,48895156,48895655	48892840,48893456,48894449,48895334,48895871	Gene ID= ENSG00000159199.13 TPM= 382.57 Transcript Type= protein_coding
chr17	48892817	48895869	48892817	48895869	+	ENST00000393366.6@ATP5G1	ENST00000393366.6	protein_coding	48892817,48893409,48894372,48895156,48895655	48892910,48893456,48894449,48895334,48895869	Gene ID= ENSG00000159199.13 TPM= 156.06 Transcript Type= protein_coding
chr17	48892767	48895868	48892767	48895868	+	ENST00000513347.1@ATP5G1	ENST00000513347.1	protein_coding	48892767,48893409,48895655	48892840,48895334,48895868	Gene ID= ENSG00000159199.13 TPM= 2.47 Transcript Type= retained_intron
chr17	48892797	48895871	48892797	48895871	+	ENST00000503641.5@ATP5G1	ENST00000503641.5	protein_coding	48892797,48893409,48894372,48895183,48895655	48892840,48893456,48894449,48895334,48895871	Gene ID= ENSG00000159199.13 TPM= 8.69 Transcript Type= protein_coding
chr17	48892817	48895871	48892817	48895871	+	ENST00000506855.1@ATP5G1	ENST00000506855.1	protein_coding	48892817,48893409,48895156,48895655	48892840,48893456,48895334,48895871	Gene ID= ENSG00000159199.13 TPM= 4.44 Transcript Type= protein_coding
chr17	48892854	48895861	48892854	48895861	+	ENST00000513781.5@ATP5G1	ENST00000513781.5	protein_coding	48892854,48894349,48895156,48895655	48893125,48894449,48895334,48895861	Gene ID= ENSG00000159199.13 TPM= 1.06 Transcript Type= processed_transcript
chr17	48908369	48929056	48908369	48929056	+	ENST00000360943.9@UBE2Z	ENST00000360943.9	protein_coding	48908369,48910808,48912834,48916076,48921160,48922847,48926964	48908820,48910880,48913021,48916187,48921272,48922937,48929056	Gene ID= ENSG00000159202.17 TPM= 59.48 Transcript Type= protein_coding
chr17	48929316	48945117	48929316	48945117	-	ENST00000502492.5@SNF8	ENST00000502492.5	protein_coding	48944681,48943925,48940924,48937020,48936170,48933205,48931643,48929316	48945117,48943975,48941062,48937124,48936242,48933346,48931717,48930612	Gene ID= ENSG00000159210.9 TPM= 143.39 Transcript Type= protein_coding
chr17	48930374	48944810	48930374	48944810	-	ENST00000290330.7@SNF8	ENST00000290330.7	protein_coding	48944681,48943925,48940924,48937020,48936170,48933205,48931643,48930374	48944810,48943975,48941062,48937124,48936242,48933346,48931714,48930612	Gene ID= ENSG00000159210.9 TPM= 144.45 Transcript Type= protein_coding
chr17	48930371	48944806	48930371	48944806	-	ENST00000510558.6@SNF8	ENST00000510558.6	protein_coding	48944681,48943925,48940924,48937020,48936170,48934479,48933205,48931643,48930371	48944806,48943975,48941062,48937124,48936242,48934576,48933346,48931717,48930612	Gene ID= ENSG00000159210.9 TPM= 1.06 Transcript Type= nonsense_mediated_decay
chr17	49210227	49223225	49210227	49223225	+	ENST00000225941.5@ABI3	ENST00000225941.5	protein_coding	49210227,49216531,49217739,49219540,49219858,49220169,49222091,49222552	49210841,49216698,49217915,49219625,49219953,49220326,49222225,49223225	Gene ID= ENSG00000108798.8 TPM= 9.56 Transcript Type= protein_coding
chr17	49317205	49362290	49317205	49362290	-	transcript3715.chr17.nic@ZNF652	transcript3715.chr17.nic	protein_coding	49361909,49322385,49317205	49362290,49322508,49317983	Gene ID= ENSG00000198740.8 TPM= 2.12 Transcript Type= NA
chr17	49317202	49362126	49317202	49362126	-	transcript3717.chr17.nic@ZNF652	transcript3717.chr17.nic	protein_coding	49361909,49317202	49362126,49317983	Gene ID= ENSG00000198740.8 TPM= 2.12 Transcript Type= NA
chr17	49289221	49293650	49289221	49293650	-	transcript3718.chr17.nnic@NA	transcript3718.chr17.nnic	NA	49289221	49293650	Gene ID= novel_gene_chr17_3719 TPM= 6.37 Transcript Type= NA
chr17	49404049	49414905	49404049	49414905	-	ENST00000614445.4@PHB	ENST00000614445.4	protein_coding	49414835,49414242,49413177,49411678,49409331,49409042,49406759,49404049	49414905,49414333,49413291,49411839,49409473,49409158,49406854,49405204	Gene ID= ENSG00000167085.11 TPM= 7.79 Transcript Type= protein_coding
chr17	49404049	49414858	49404049	49414858	-	ENST00000617874.4@PHB	ENST00000617874.4	protein_coding	49414740,49413177,49411678,49409331,49409042,49406759,49404049	49414858,49413291,49411839,49409473,49409158,49406854,49405204	Gene ID= ENSG00000167085.11 TPM= 8.85 Transcript Type= protein_coding
chr17	49404052	49414880	49404052	49414880	-	ENST00000300408.7@PHB	ENST00000300408.7	protein_coding	49414835,49413177,49411678,49409331,49409042,49406759,49404052	49414880,49413291,49411839,49409473,49409158,49406854,49405204	Gene ID= ENSG00000167085.11 TPM= 50.27 Transcript Type= protein_coding
chr17	49413514	49414881	49413514	49414881	-	transcript3728.chr17.nnic@NA	transcript3728.chr17.nnic	NA	49413514	49414881	Gene ID= novel_gene_chr17_3729 TPM= 2.12 Transcript Type= NA
chr17	49495293	49515017	49495293	49515017	+	ENST00000172229.7@NGFR	ENST00000172229.7	protein_coding	49495293,49502063,49506299,49510412,49511892,49512708	49495483,49502204,49506658,49510664,49512052,49515017	Gene ID= ENSG00000064300.8 TPM= 18.06 Transcript Type= protein_coding
chr17	49575858	49580358	49575858	49580358	+	ENST00000328741.5@NXPH3	ENST00000328741.5	protein_coding	49575858,49578596	49576273,49580358	Gene ID= ENSG00000182575.7 TPM= 2.12 Transcript Type= protein_coding
chr17	49600006	49678092	49600006	49678092	-	transcript3744.chr17.nic@SPOP	transcript3744.chr17.nic	protein_coding	49677933,49675895,49668027,49622733,49621946,49619234,49618981,49611280,49607874,49607250,49601865,49600006	49678092,49676016,49668078,49622876,49622067,49619385,49619108,49611457,49607929,49607372,49602007,49600522	Gene ID= ENSG00000121067.17 TPM= 6.37 Transcript Type= NA
chr17	49598886	49678163	49598886	49678163	-	ENST00000347630.6@SPOP	ENST00000347630.6	protein_coding	49677933,49636759,49622733,49621946,49619234,49618981,49611280,49607874,49607250,49601865,49598886	49678163,49636809,49622876,49622067,49619385,49619108,49611457,49607929,49607372,49602007,49600522	Gene ID= ENSG00000121067.17 TPM= 1.06 Transcript Type= protein_coding
chr17	49599284	49678046	49599284	49678046	-	transcript3747.chr17.nic@SPOP	transcript3747.chr17.nic	protein_coding	49677933,49668027,49622733,49621946,49619234,49618981,49611280,49607874,49607250,49601865,49599284	49678046,49668078,49622876,49622067,49619385,49619108,49611457,49607929,49607372,49602007,49600522	Gene ID= ENSG00000121067.17 TPM= 3.19 Transcript Type= NA
chr17	49598884	49678110	49598884	49678110	-	ENST00000393328.6@SPOP	ENST00000393328.6	protein_coding	49677933,49675895,49622733,49621946,49619234,49618981,49611280,49607874,49607250,49601865,49598884	49678110,49676016,49622876,49622067,49619385,49619108,49611457,49607929,49607372,49602007,49600522	Gene ID= ENSG00000121067.17 TPM= 1.06 Transcript Type= protein_coding
chr17	49600006	49678234	49600006	49678234	-	ENST00000504102.5@SPOP	ENST00000504102.5	protein_coding	49677933,49622733,49621946,49619234,49618981,49611280,49607874,49607250,49601865,49600006	49678234,49622876,49622067,49619385,49619108,49611457,49607929,49607372,49602007,49600522	Gene ID= ENSG00000121067.17 TPM= 33.99 Transcript Type= protein_coding
chr17	49610169	49613290	49610169	49613290	+	transcript3759.chr17.nnic@NA	transcript3759.chr17.nnic	NA	49610169	49613290	Gene ID= novel_gene_chr17_3760 TPM= 2.12 Transcript Type= NA
chr17	49700943	49708199	49700943	49708199	-	ENST00000240333.10@SLC35B1	ENST00000240333.10	protein_coding	49707730,49706965,49706204,49705866,49705124,49704100,49703188,49702858,49700943	49708199,49707068,49706334,49705896,49705281,49704226,49703294,49703011,49701510	Gene ID= ENSG00000121073.13 TPM= 8.5 Transcript Type= protein_coding
chr17	49705461	49706389	49705461	49706389	+	transcript3769.chr17.nnic@NA	transcript3769.chr17.nnic	NA	49705461	49706389	Gene ID= novel_gene_chr17_3770 TPM= 10.62 Transcript Type= NA
chr17	49710332	49764167	49710332	49764167	-	ENST00000240364.6@FAM117A	ENST00000240364.6	protein_coding	49763892,49732551,49722499,49720326,49719760,49717513,49716165,49710332	49764167,49732720,49722594,49720436,49719894,49717714,49716315,49711555	Gene ID= ENSG00000121104.7 TPM= 5.31 Transcript Type= protein_coding
chr17	49788555	49835030	49788555	49835030	+	ENST00000259021.8@KAT7	ENST00000259021.8	protein_coding	49788555,49791886,49796750,49798319,49805363,49809119,49811476,49815803,49817820,49821337,49821650,49823202,49826000,49826693,49827401	49788849,49792033,49796926,49798558,49805445,49809208,49811574,49815913,49818011,49821426,49821790,49823295,49826146,49826799,49835030	Gene ID= ENSG00000136504.11 TPM= 29.74 Transcript Type= protein_coding
chr17	49788706	49829096	49788706	49829096	+	ENST00000424009.6@KAT7	ENST00000424009.6	protein_coding	49788706,49791886,49796750,49798319,49805363,49811476,49815803,49817820,49821337,49821650,49823202,49826000,49826693,49827401	49788849,49792033,49796926,49798558,49805445,49811574,49815913,49818011,49821426,49821790,49823295,49826146,49826799,49829096	Gene ID= ENSG00000136504.11 TPM= 19.12 Transcript Type= protein_coding
chr17	50052658	50053257	50052658	50053257	-	transcript3778.chr17.nnic@NA	transcript3778.chr17.nnic	NA	50052658	50053257	Gene ID= novel_gene_chr17_3779 TPM= 4.25 Transcript Type= NA
chr17	50056110	50090480	50056110	50090480	+	ENST00000320031.12@ITGA3	ENST00000320031.12	protein_coding	50056110,50064077,50064528,50068056,50070844,50071311,50071986,50073916,50074144,50074448,50075459,50075599,50076326,50076584,50076974,50077379,50078046,50078207,50078824,50079076,50079435,50080262,50081310,50087744,50088225,50089110	50056645,50064204,50064607,50068305,50070930,50071518,50072182,50074004,50074280,50074534,50075526,50075735,50076475,50076681,50077121,50077447,50078125,50078284,50078926,50079258,50079557,50080375,50081408,50087869,50088366,50090480	Gene ID= ENSG00000005884.17 TPM= 44.61 Transcript Type= protein_coding
chr17	50095329	50111058	50095329	50111058	+	transcript3792.chr17.nnic@PDK2	transcript3792.chr17.nnic	protein_coding	50095329,50097423,50105371,50105885,50106794,50107076,50108319,50108612,50109287,50109957	50095553,50097564,50105442,50106069,50106883,50107153,50108417,50108719,50109400,50111058	Gene ID= ENSG00000005882.11 TPM= 53.11 Transcript Type= NA
chr17	50095387	50106368	50095387	50106368	+	ENST00000505897.5@PDK2	ENST00000505897.5	protein_coding	50095387,50097423,50105371,50105885	50095553,50097564,50105442,50106368	Gene ID= ENSG00000005882.11 TPM= 22.31 Transcript Type= retained_intron
chr17	50135227	50150703	50135227	50150703	-	transcript3802.chr17.nnic@PPP1R9B	transcript3802.chr17.nnic	protein_coding	50149143,50145113,50143598,50140093,50139429,50139263,50135968,50135553,50135227	50150703,50145245,50143720,50141373,50139583,50139318,50136197,50135649,50135384	Gene ID= ENSG00000108819.10 TPM= 15.93 Transcript Type= NA
chr17	50133735	50150630	50133735	50150630	-	ENST00000612501.1@PPP1R9B	ENST00000612501.1	protein_coding	50149143,50145113,50143598,50141269,50140093,50139429,50139263,50135968,50135553,50133735	50150630,50145245,50143718,50141373,50140228,50139581,50139316,50136197,50135649,50135384	Gene ID= ENSG00000108819.10 TPM= 14.87 Transcript Type= protein_coding
chr17	50166009	50175928	50166009	50175928	+	transcript3821.chr17.nic@SGCA	transcript3821.chr17.nic	protein_coding	50166009,50167368,50167582,50167947,50168374,50169092,50170640,50175257,50175712	50166077,50167487,50167736,50168019,50168572,50170351,50170666,50175449,50175928	Gene ID= ENSG00000108823.15 TPM= 8.6 Transcript Type= NA
chr17	50166019	50175928	50166019	50175928	+	transcript3829.chr17.nic@SGCA	transcript3829.chr17.nic	protein_coding	50166019,50167368,50167947,50168374,50170640,50175257,50175712	50166077,50167487,50168019,50168572,50170666,50175449,50175928	Gene ID= ENSG00000108823.15 TPM= 19.07 Transcript Type= NA
chr17	50166005	50175928	50166005	50175928	+	ENST00000344627.10@SGCA	ENST00000344627.10	protein_coding	50166005,50167368,50167582,50167947,50168374,50170640,50175257,50175712	50166077,50167487,50167736,50168019,50168572,50170666,50175449,50175928	Gene ID= ENSG00000108823.15 TPM= 98.89 Transcript Type= protein_coding
chr17	50166005	50175931	50166005	50175931	+	ENST00000262018.7@SGCA	ENST00000262018.7	protein_coding	50166005,50167368,50167582,50167947,50168374,50169092,50170143,50170640,50175257,50175712	50166077,50167487,50167736,50168019,50168572,50169254,50170351,50170666,50175449,50175931	Gene ID= ENSG00000108823.15 TPM= 171.32 Transcript Type= protein_coding
chr17	50185258	50201631	50185258	50201631	-	transcript3804.chr17.nnic@COL1A1	transcript3804.chr17.nnic	protein_coding	50201612,50201411,50199753,50199556,50199418,50199226,50198433,50198161,50197949,50197732,50197180,50197010,50196617,50196484,50196314,50196155,50195923,50195567,50195434,50195232,50195047,50194721,50194573,50194349,50194130,50193943,50192994,50192797,50192640,50192475,50191980,50191788,50191383,50190817,50190543,50190327,50190001,50189859,50189679,50189377,50189168,50188903,50188742,50188530,50188096,50187876,50187484,50187015,50186640,50186317,50185778,50185258	50201631,50201477,50199947,50199590,50199453,50199327,50198504,50198205,50198002,50197785,50197233,50197063,50196670,50196528,50196367,50196199,50195976,50195665,50195478,50195330,50195100,50194828,50194626,50194447,50194183,50194041,50193047,50192850,50192693,50192528,50192024,50191886,50191490,50190924,50190596,50190380,50190108,50189912,50189732,50189538,50189275,50189010,50188795,50188637,50188149,50187983,50187537,50187122,50186922,50186507,50186020,50185648	Gene ID= ENSG00000108821.13 TPM= 63.73 Transcript Type= NA
chr17	50184102	50185197	50184102	50185197	-	transcript3841.chr17.nnic@NA	transcript3841.chr17.nnic	NA	50184102	50185197	Gene ID= novel_gene_chr17_3842 TPM= 21.24 Transcript Type= NA
chr17	50346092	50361151	50346092	50361151	+	ENST00000017003.6@XYLT2	ENST00000017003.6	protein_coding	50346092,50353630,50354408,50354854,50355501,50355781,50356085,50356511,50357057,50358207,50359969	50346275,50354122,50354583,50355056,50355581,50355997,50356261,50356773,50357252,50358540,50361151	Gene ID= ENSG00000015532.9 TPM= 5.31 Transcript Type= protein_coding
chr17	50358978	50361151	50358978	50361151	+	ENST00000571021.1@XYLT2	ENST00000571021.1	protein_coding	50358978	50361151	Gene ID= ENSG00000015532.9 TPM= 6.37 Transcript Type= retained_intron
chr17	50367867	50373214	50367867	50373214	-	ENST00000225969.8@MRPL27	ENST00000225969.8	protein_coding	50373131,50370455,50370032,50367867	50373214,50370586,50370099,50368298	Gene ID= ENSG00000108826.15 TPM= 65.85 Transcript Type= protein_coding
chr17	50367868	50373207	50367868	50373207	-	ENST00000442592.3@MRPL27	ENST00000442592.3	protein_coding	50373131,50370455,50367868	50373207,50370586,50370099	Gene ID= ENSG00000108826.15 TPM= 2.12 Transcript Type= protein_coding
chr17	50381238	50397553	50381238	50397553	-	ENST00000225972.7@LRRC59	ENST00000225972.7	protein_coding	50397213,50394929,50392739,50392398,50388060,50385118,50381238	50397553,50394988,50392897,50392502,50388132,50385291,50383235	Gene ID= ENSG00000108829.9 TPM= 54.17 Transcript Type= protein_coding
chr17	50478800	50485975	50478800	50485975	+	ENST00000258955.6@RSAD1	ENST00000258955.6	protein_coding	50478800,50479629,50479880,50482091,50482643,50483340,50483706,50484442,50484744	50479019,50479762,50480084,50482456,50482706,50483487,50483760,50484545,50485975	Gene ID= ENSG00000136444.9 TPM= 60.54 Transcript Type= protein_coding
chr17	50547089	50555852	50547089	50555852	+	ENST00000006658.10@SPATA20	ENST00000006658.10	protein_coding	50547089,50547720,50548283,50548554,50548810,50549043,50549286,50549985,50550208,50550536,50550708,50550998,50551511,50551969,50554251,50555232,50555492	50547285,50547767,50548453,50548618,50548964,50549186,50549487,50550115,50550312,50550610,50550917,50551190,50551679,50552180,50554450,50555312,50555852	Gene ID= ENSG00000006282.20 TPM= 67.21 Transcript Type= protein_coding
chr17	50547127	50555850	50547127	50555850	+	ENST00000503127.5@SPATA20	ENST00000503127.5	protein_coding	50547127,50547665,50548283,50548554,50548810,50549043,50549286,50549985,50550208,50550536,50550708,50550998,50551511,50551969,50554251,50555232,50555492	50547285,50547767,50548453,50548618,50548964,50549186,50549487,50550115,50550312,50550610,50550917,50551190,50551679,50552180,50554450,50555312,50555850	Gene ID= ENSG00000006282.20 TPM= 49.34 Transcript Type= nonsense_mediated_decay
chr17	50547126	50555852	50547126	50555852	+	ENST00000356488.8@SPATA20	ENST00000356488.8	protein_coding	50547126,50548283,50548554,50548810,50549043,50549286,50549985,50550208,50550536,50550708,50550998,50551511,50551969,50554251,50555232,50555492	50547285,50548453,50548618,50548964,50549186,50549487,50550115,50550312,50550610,50550917,50551190,50551679,50552180,50554450,50555312,50555852	Gene ID= ENSG00000006282.20 TPM= 39.6 Transcript Type= protein_coding
chr17	50543058	50555850	50543058	50555850	+	ENST00000504334.5@SPATA20	ENST00000504334.5	protein_coding	50543058,50546306,50547068,50547665,50548283,50548554,50548810,50549043,50549286,50549985,50550536,50550708,50550998,50551511,50551969,50554251,50555232,50555492	50543535,50546481,50547285,50547767,50548453,50548618,50548964,50549186,50549487,50550312,50550610,50550917,50551190,50551679,50552180,50554450,50555312,50555850	Gene ID= ENSG00000006282.20 TPM= 5.79 Transcript Type= nonsense_mediated_decay
chr17	50693190	50707924	50693190	50707924	-	ENST00000285243.6@ANKRD40	ENST00000285243.6	protein_coding	50707521,50700568,50699399,50696940,50693190	50707924,50700716,50699893,50697121,50696143	Gene ID= ENSG00000154945.6 TPM= 23.37 Transcript Type= protein_coding
chr17	50719544	50756213	50719544	50756213	+	ENST00000505658.5@LUC7L3	ENST00000505658.5	protein_coding	50719544,50736960,50740306,50741102,50741657,50743706,50744652,50745720,50746542,50750501	50719831,50737026,50740345,50741246,50741731,50743810,50744813,50746003,50746702,50756213	Gene ID= ENSG00000108848.15 TPM= 4.25 Transcript Type= protein_coding
chr17	50719603	50752709	50719603	50752709	+	ENST00000240304.5@LUC7L3	ENST00000240304.5	protein_coding	50719603,50736960,50740306,50741102,50741657,50743706,50744652,50745720,50746542,50750501,50752200	50719831,50737026,50740345,50741246,50741731,50743810,50744813,50746003,50746702,50750694,50752709	Gene ID= ENSG00000108848.15 TPM= 2.12 Transcript Type= protein_coding
chr17	50862223	50866345	50862223	50866345	-	ENST00000499247.2@TOB1	ENST00000499247.2	protein_coding	50866058,50862223	50866345,50864163	Gene ID= ENSG00000141232.4 TPM= 171.01 Transcript Type= protein_coding
chr17	50866679	50868307	50866679	50868307	+	ENST00000416263.3@TOB1-AS1	ENST00000416263.3	processed_transcript	50866679,50867496	50867217,50868307	Gene ID= ENSG00000229980.4 TPM= 5.31 Transcript Type= antisense_RNA
chr17	50965644	51120901	50965644	51120901	-	transcript3924.chr17.nic@SPAG9	transcript3924.chr17.nic	protein_coding	51120354,51079584,51056412,51047375,51041501,51021158,51020159,51014232,51007269,51006085,51005212,51001715,50999661,50998444,50996565,50995444,50995057,50993764,50990450,50989677,50987112,50985698,50984923,50982524,50979746,50977108,50975863,50974771,50970707,50965644	51120901,51079704,51056482,51047469,51041651,51021365,51020258,51014353,51007326,51006237,51005263,51001845,50999717,50998617,50996694,50995533,50995224,50993935,50990668,50989872,50987237,50985778,50984990,50982672,50979917,50977221,50975901,50974947,50970856,50966387	Gene ID= ENSG00000008294.20 TPM= 16.46 Transcript Type= NA
chr17	50965644	51120865	50965644	51120865	-	ENST00000357122.8@SPAG9	ENST00000357122.8	protein_coding	51120354,51079584,51056412,51047375,51041501,51021158,51020159,51014232,51007269,51006085,51005212,51001715,50999661,50998444,50996565,50995444,50995057,50993764,50990450,50989677,50987112,50985698,50984923,50982524,50979746,50977108,50974771,50970707,50965644	51120865,51079704,51056482,51047469,51041651,51021365,51020258,51014353,51007326,51006237,51005263,51001845,50999717,50998617,50996694,50995533,50995224,50993935,50990668,50989872,50987237,50985778,50984990,50982672,50979917,50977221,50974947,50970856,50966387	Gene ID= ENSG00000008294.20 TPM= 5.84 Transcript Type= protein_coding
chr17	51104073	51104944	51104073	51104944	+	transcript3931.chr17.nnic@NA	transcript3931.chr17.nnic	NA	51104073	51104944	Gene ID= novel_gene_chr17_3932 TPM= 3.19 Transcript Type= NA
chr17	51153536	51162195	51153536	51162195	+	ENST00000393196.7@NME1	ENST00000393196.7	protein_coding	51153536,51155651,51159980,51161160,51161728	51153662,51155780,51160081,51161272,51162195	Gene ID= ENSG00000239672.7 TPM= 28.68 Transcript Type= protein_coding
chr17	51153597	51162035	51153597	51162035	+	ENST00000475573.5@NME1	ENST00000475573.5	protein_coding	51153597,51155651,51159980,51161098,51161728	51153662,51155780,51160081,51161272,51162035	Gene ID= ENSG00000239672.7 TPM= 2.12 Transcript Type= nonsense_mediated_decay
chr17	51153590	51171744	51153590	51171744	+	ENST00000393193.6@NME1-NME2	ENST00000393193.6	protein_coding	51153590,51155651,51159980,51161160,51166827,51168242,51169937,51171487	51153662,51155780,51160081,51161272,51166956,51168343,51170049,51171744	Gene ID= ENSG00000011052.21 TPM= 5.58 Transcript Type= protein_coding
chr17	51165435	51171744	51165435	51171744	+	ENST00000514264.6@NME2	ENST00000514264.6	protein_coding	51165435,51166827,51168242,51169937,51171487	51165681,51166956,51168343,51170049,51171744	Gene ID= ENSG00000243678.11 TPM= 16.73 Transcript Type= protein_coding
chr17	51166418	51171744	51166418	51171744	+	ENST00000503064.5@NME2	ENST00000503064.5	protein_coding	51166418,51166827,51168242,51169937,51171487	51166563,51166956,51168343,51170049,51171744	Gene ID= ENSG00000243678.11 TPM= 7.17 Transcript Type= protein_coding
chr17	51166278	51171747	51166278	51171747	+	ENST00000512737.5@NME2	ENST00000512737.5	protein_coding	51166278,51166827,51168242,51169937,51171487	51166497,51166956,51168343,51170049,51171747	Gene ID= ENSG00000243678.11 TPM= 199.42 Transcript Type= protein_coding
chr17	51166420	51171744	51166420	51171744	+	ENST00000393183.7@NME2	ENST00000393183.7	protein_coding	51166420,51166827,51168242,51171487	51166497,51166956,51168343,51171744	Gene ID= ENSG00000243678.11 TPM= 4.78 Transcript Type= protein_coding
chr17	51260528	51297933	51260528	51297933	+	ENST00000225298.11@UTP18	ENST00000225298.11	protein_coding	51260528,51263274,51266182,51268837,51273362,51275866,51277130,51280005,51280389,51285245,51288029,51293903,51296965,51297782	51260926,51263386,51266280,51268904,51273450,51275991,51277304,51280105,51280479,51285368,51288203,51294045,51297003,51297933	Gene ID= ENSG00000011260.13 TPM= 10.62 Transcript Type= protein_coding
chr17	54900513	54961956	54900513	54961956	+	ENST00000575882.5@TOM1L1	ENST00000575882.5	protein_coding	54900513,54903708,54905489,54912666,54913748,54914639,54915746,54930073,54936649,54937109,54938924,54947261,54949518,54950045,54960566,54961235	54900923,54903792,54905567,54912815,54913873,54914743,54915862,54930206,54936709,54937226,54939020,54947312,54949623,54950126,54960627,54961956	Gene ID= ENSG00000141198.15 TPM= 2.12 Transcript Type= protein_coding
chr17	54900801	54961949	54900801	54961949	+	transcript3948.chr17.nnic@TOM1L1	transcript3948.chr17.nnic	protein_coding	54900801,54903708,54905489,54912666,54913748,54914639,54915746,54930073,54936649,54937109,54938924,54960566,54961235	54900923,54903792,54905567,54912815,54913873,54914743,54915862,54930206,54936709,54937226,54939020,54960627,54961949	Gene ID= ENSG00000141198.15 TPM= 2.12 Transcript Type= NA
chr17	54899387	54937316	54899387	54937316	+	ENST00000570371.5@TOM1L1	ENST00000570371.5	protein_coding	54899387,54900394,54903708,54905489,54912666,54913748,54914639,54915746,54930073,54936649,54937109	54900233,54900923,54903792,54905567,54912815,54913873,54914743,54915862,54930206,54936709,54937316	Gene ID= ENSG00000141198.15 TPM= 2.12 Transcript Type= protein_coding
chr17	54900857	54938033	54900857	54938033	+	ENST00000575333.5@TOM1L1	ENST00000575333.5	protein_coding	54900857,54903708,54905489,54912666,54913748,54914639,54915746,54930073,54936649,54937109	54900923,54903792,54905567,54912815,54913873,54914743,54915862,54930206,54936709,54938033	Gene ID= ENSG00000141198.15 TPM= 4.25 Transcript Type= protein_coding
chr17	54900834	54917452	54900834	54917452	+	ENST00000572405.5@TOM1L1	ENST00000572405.5	protein_coding	54900834,54903713,54905489,54912666,54913748,54914639,54915746	54900923,54903792,54905567,54912815,54913873,54914743,54917452	Gene ID= ENSG00000141198.15 TPM= 3.19 Transcript Type= protein_coding
chr17	54961206	54968785	54961206	54968785	-	ENST00000299335.7@COX11	ENST00000299335.7	protein_coding	54968281,54964697,54963306,54961206	54968785,54964852,54963431,54962915	Gene ID= ENSG00000166260.11 TPM= 32.93 Transcript Type= protein_coding
chr17	54962903	54968703	54962903	54968703	-	ENST00000571584.1@COX11	ENST00000571584.1	protein_coding	54968281,54964697,54962903	54968703,54964852,54963431	Gene ID= ENSG00000166260.11 TPM= 5.31 Transcript Type= protein_coding
chr17	54951909	54968654	54951909	54968654	-	ENST00000572558.5@COX11	ENST00000572558.5	protein_coding	54968281,54964697,54963306,54961119,54951909	54968654,54964852,54963431,54961312,54952112	Gene ID= ENSG00000166260.11 TPM= 2.12 Transcript Type= nonsense_mediated_decay
chr17	54957523	54958746	54957523	54958746	+	transcript3966.chr17.nnic@NA	transcript3966.chr17.nnic	NA	54957523	54958746	Gene ID= novel_gene_chr17_3967 TPM= 8.5 Transcript Type= NA
chr17	55392613	55421992	55392613	55421992	-	ENST00000262065.7@MMD	ENST00000262065.7	protein_coding	55421670,55414151,55411257,55407746,55403767,55401469,55392613	55421992,55414232,55411417,55407820,55403868,55401538,55394534	Gene ID= ENSG00000108960.7 TPM= 22.31 Transcript Type= protein_coding
chr17	55750979	55777374	55750979	55777374	+	ENST00000268896.9@PCTP	ENST00000268896.9	protein_coding	55750979,55767335,55771106,55773724,55774792,55776035	55751244,55767452,55771185,55773895,55774859,55777374	Gene ID= ENSG00000141179.13 TPM= 12.21 Transcript Type= protein_coding
chr17	55751094	55823090	55751094	55823090	+	ENST00000573500.5@PCTP	ENST00000573500.5	protein_coding	55751094,55767335,55771106,55773724,55774792,55822761	55751244,55767452,55771185,55773895,55774859,55823090	Gene ID= ENSG00000141179.13 TPM= 2.12 Transcript Type= protein_coding
chr17	55751400	55777374	55751400	55777374	+	ENST00000325214.10@PCTP	ENST00000325214.10	protein_coding	55751400,55767335,55771106,55773724,55774792,55776035	55751477,55767452,55771185,55773895,55774859,55777374	Gene ID= ENSG00000141179.13 TPM= 1.59 Transcript Type= protein_coding
chr17	56828486	56830251	56828486	56830251	-	transcript3985.chr17.nnic@NA	transcript3985.chr17.nnic	NA	56828486	56830251	Gene ID= novel_gene_chr17_3986 TPM= 3.19 Transcript Type= NA
chr17	56887909	56914038	56887909	56914038	-	ENST00000316881.8@TRIM25	ENST00000316881.8	protein_coding	56913392,56908468,56904255,56901419,56899115,56895926,56895521,56895343,56887909	56914038,56908563,56904488,56901578,56899180,56895952,56895604,56895441,56892229	Gene ID= ENSG00000121060.16 TPM= 4.25 Transcript Type= protein_coding
chr17	56948133	56961060	56948133	56961060	-	transcript3989.chr17.nic@COIL	transcript3989.chr17.nic	protein_coding	56960775,56948133	56961060,56950996	Gene ID= ENSG00000121058.4 TPM= 2.12 Transcript Type= NA
chr17	56950757	56961060	56950757	56961060	-	transcript3990.chr17.nic@COIL	transcript3990.chr17.nic	protein_coding	56960775,56950757	56961060,56950996	Gene ID= ENSG00000121058.4 TPM= 7.44 Transcript Type= NA
chr17	56938187	56961054	56938187	56961054	-	ENST00000240316.4@COIL	ENST00000240316.4	protein_coding	56960775,56949889,56949681,56949387,56946442,56942035,56938187	56961054,56950996,56949767,56949434,56946511,56942123,56939154	Gene ID= ENSG00000121058.4 TPM= 26.55 Transcript Type= protein_coding
chr17	56978084	57006768	56978084	57006768	+	transcript3991.chr17.nic@SCPEP1	transcript3991.chr17.nic	protein_coding	56978084,56981082,56985378,56987695,56988216,56991099,56994981,56995507,56996962,56997968,57000855,57002018,57006173	56978235,56981230,56985467,56987850,56988290,56991171,56995018,56995635,56997055,56998498,57000992,57002181,57006768	Gene ID= ENSG00000121064.12 TPM= 4.51 Transcript Type= NA
chr17	56978154	57006768	56978154	57006768	+	transcript3993.chr17.nnic@SCPEP1	transcript3993.chr17.nnic	protein_coding	56978154,56981082,56985388,56987695,56988216,56991099,56994981,56995507,56996962,56998385,57000855,57002018,57006173	56978235,56981230,56985467,56987850,56988290,56991171,56995018,56995635,56997055,56998498,57000992,57002181,57006768	Gene ID= ENSG00000121064.12 TPM= 2.39 Transcript Type= NA
chr17	56978084	57006768	56978084	57006768	+	transcript3994.chr17.nic@SCPEP1	transcript3994.chr17.nic	protein_coding	56978084,56981082,56985378,56987695,56988216,56991099,56994981,56995507,56996962,57000855,57002018,57006173	56978235,56981230,56985467,56987850,56988290,56991171,56995018,56995635,56997055,57000992,57002181,57006768	Gene ID= ENSG00000121064.12 TPM= 7.7 Transcript Type= NA
chr17	56978140	56995875	56978140	56995875	+	transcript4000.chr17.nic@SCPEP1	transcript4000.chr17.nic	protein_coding	56978140,56981082,56985378,56987695,56988216,56991099,56994981,56995507	56978235,56981230,56985467,56987850,56988290,56991171,56995018,56995875	Gene ID= ENSG00000121064.12 TPM= 2.12 Transcript Type= NA
chr17	56978105	57006763	56978105	57006763	+	ENST00000262288.7@SCPEP1	ENST00000262288.7	protein_coding	56978105,56981082,56985378,56987695,56988216,56991099,56994981,56995507,56996962,56998385,57000855,57002018,57006173	56978235,56981230,56985467,56987850,56988290,56991171,56995018,56995635,56997055,56998498,57000992,57002181,57006763	Gene ID= ENSG00000121064.12 TPM= 59.75 Transcript Type= protein_coding
chr17	57078298	57085022	57078298	57085022	-	ENST00000576871.1@AC007114.1	ENST00000576871.1	lincRNA	57084840,57079287,57078298	57085022,57079410,57078703	Gene ID= ENSG00000263004.1 TPM= 1.06 Transcript Type= lincRNA
chr17	57085717	57121342	57085717	57121342	+	ENST00000621116.4@AKAP1	ENST00000621116.4	protein_coding	57085717,57096591,57105441,57110025,57111798,57112491,57114459,57116111,57116860,57118381,57118982,57120250	57086074,57096763,57107178,57110158,57111924,57112618,57114636,57116261,57116927,57118454,57119044,57121342	Gene ID= ENSG00000121057.12 TPM= 29.74 Transcript Type= protein_coding
chr17	57256743	57274489	57256743	57274489	+	ENST00000581523.5@MSI2	ENST00000581523.5	protein_coding	57256743,57257098,57257466,57258270,57262151,57274268	57256804,57257138,57257547,57258354,57262192,57274489	Gene ID= ENSG00000153944.10 TPM= 1.06 Transcript Type= processed_transcript
chr17	57282837	57285811	57282837	57285811	-	transcript4054.chr17.nnic@NA	transcript4054.chr17.nnic	NA	57282837	57285811	Gene ID= novel_gene_chr17_4055 TPM= 9.56 Transcript Type= NA
chr17	57287133	57290542	57287133	57290542	-	transcript4058.chr17.nnic@NA	transcript4058.chr17.nnic	NA	57287133	57290542	Gene ID= novel_gene_chr17_4059 TPM= 2.12 Transcript Type= NA
chr17	57419531	57421070	57419531	57421070	-	transcript4056.chr17.nnic@NA	transcript4056.chr17.nnic	NA	57419531	57421070	Gene ID= novel_gene_chr17_4057 TPM= 4.25 Transcript Type= NA
chr17	57472899	57476976	57472899	57476976	-	transcript4060.chr17.nnic@NA	transcript4060.chr17.nnic	NA	57472899	57476976	Gene ID= novel_gene_chr17_4061 TPM= 2.12 Transcript Type= NA
chr17	57520672	57522822	57520672	57522822	-	transcript4062.chr17.nnic@NA	transcript4062.chr17.nnic	NA	57520672	57522822	Gene ID= novel_gene_chr17_4063 TPM= 2.12 Transcript Type= NA
chr17	57681879	57684607	57681879	57684607	+	transcript4052.chr17.nnic@NA	transcript4052.chr17.nnic	NA	57681879	57684607	Gene ID= novel_gene_chr17_4053 TPM= 3.19 Transcript Type= NA
chr17	57771946	57834749	57771946	57834749	-	ENST00000580960.1@AC015845.2	ENST00000580960.1	lincRNA	57834496,57771946	57834749,57772196	Gene ID= ENSG00000265542.5 TPM= 1.06 Transcript Type= lincRNA
chr17	57839486	57850045	57839486	57850045	-	transcript4067.chr17.nic@MRPS23	transcript4067.chr17.nic	protein_coding	57849839,57849240,57841183,57840926,57839486	57850045,57849410,57841260,57841052,57839935	Gene ID= ENSG00000181610.12 TPM= 2.66 Transcript Type= NA
chr17	57839486	57851838	57839486	57851838	-	transcript4069.chr17.nnic@MRPS23	transcript4069.chr17.nnic	protein_coding	57851752,57849240,57841183,57840926,57839486	57851838,57849410,57841260,57841052,57839935	Gene ID= ENSG00000181610.12 TPM= 2.66 Transcript Type= NA
chr17	57844342	57846975	57844342	57846975	+	transcript4075.chr17.nnic@NA	transcript4075.chr17.nnic	NA	57844342,57845176,57846296	57844711,57846249,57846975	Gene ID= novel_gene_chr17_4076 TPM= 2.12 Transcript Type= NA
chr17	57870680	57955273	57870680	57955273	-	transcript4093.chr17.nic@CUEDC1	transcript4093.chr17.nic	protein_coding	57955225,57885229,57879611,57873591,57872663,57870680	57955273,57885879,57879738,57873717,57872855,57871369	Gene ID= ENSG00000180891.12 TPM= 3.19 Transcript Type= NA
chr17	57861243	57955323	57861243	57955323	-	ENST00000577830.5@CUEDC1	ENST00000577830.5	protein_coding	57955225,57885229,57879611,57873591,57872663,57871286,57869122,57868150,57867357,57866474,57861243	57955323,57885879,57879738,57873717,57872855,57871369,57869193,57868243,57867415,57866544,57863285	Gene ID= ENSG00000180891.12 TPM= 6.37 Transcript Type= protein_coding
chr17	57952234	57955278	57952234	57955278	-	transcript4099.chr17.nnic@NA	transcript4099.chr17.nnic	NA	57952234	57955278	Gene ID= novel_gene_chr17_4100 TPM= 6.37 Transcript Type= NA
chr17	57954720	57956142	57954720	57956142	+	transcript4095.chr17.nnic@NA	transcript4095.chr17.nnic	NA	57954720	57956142	Gene ID= novel_gene_chr17_4096 TPM= 4.25 Transcript Type= NA
chr17	57973759	57988388	57973759	57988388	-	transcript4101.chr17.nnic@VEZF1	transcript4101.chr17.nnic	protein_coding	57988079,57985254,57982699,57981873,57980603,57979152,57973759	57988388,57985465,57983393,57981936,57980786,57979313,57974900	Gene ID= ENSG00000136451.8 TPM= 3.19 Transcript Type= NA
chr17	57972572	57988228	57972572	57988228	-	transcript4105.chr17.nic@VEZF1	transcript4105.chr17.nic	protein_coding	57988079,57982699,57981873,57980603,57979152,57972572	57988228,57983393,57981936,57980804,57979313,57974900	Gene ID= ENSG00000136451.8 TPM= 4.25 Transcript Type= NA
chr17	57973759	57988152	57973759	57988152	-	ENST00000581208.1@VEZF1	ENST00000581208.1	protein_coding	57988079,57982699,57981873,57980603,57979152,57973759	57988152,57983393,57981936,57980786,57979313,57974900	Gene ID= ENSG00000136451.8 TPM= 10.62 Transcript Type= protein_coding
chr17	57986311	57988005	57986311	57988005	-	transcript4108.chr17.nnic@NA	transcript4108.chr17.nnic	NA	57986311	57988005	Gene ID= novel_gene_chr17_4109 TPM= 3.19 Transcript Type= NA
chr17	58003493	58007246	58003493	58007246	-	transcript4112.chr17.nic@SRSF1	transcript4112.chr17.nic	protein_coding	58006944,58006343,58005801,58005414,58004923,58003493	58007246,58006527,58005973,58005600,58005041,58004001	Gene ID= ENSG00000136450.12 TPM= 15.93 Transcript Type= NA
chr17	58083415	58095536	58083415	58095536	+	ENST00000579991.2@DYNLL2	ENST00000579991.2	protein_coding	58083415,58087082,58089142	58083683,58087222,58095536	Gene ID= ENSG00000264364.2 TPM= 4.25 Transcript Type= protein_coding
chr17	58090291	58091222	58090291	58091222	+	transcript4122.chr17.nnic@NA	transcript4122.chr17.nnic	NA	58090291	58091222	Gene ID= novel_gene_chr17_4123 TPM= 59.48 Transcript Type= NA
chr17	58205437	58219305	58205437	58219305	-	ENST00000393119.6@MKS1	ENST00000393119.6	protein_coding	58219151,58218620,58216666,58216088,58214741,58214259,58213765,58212982,58212378,58210980,58210659,58208513,58208105,58207894,58207085,58206465,58206283,58205437	58219305,58218729,58216736,58216243,58214838,58214387,58213869,58213090,58212434,58211022,58210724,58208583,58208174,58208001,58207218,58206547,58206380,58206170	Gene ID= ENSG00000011143.16 TPM= 10.62 Transcript Type= protein_coding
chr17	58269856	58280935	58269856	58280935	-	ENST00000225275.3@MPO	ENST00000225275.3	protein_coding	58280605,58280366,58279839,58279523,58279297,58279008,58277827,58275542,58273414,58272748,58271655,58269856	58280935,58280459,58280014,58279646,58279426,58279214,58278145,58275702,58273669,58272918,58271892,58270863	Gene ID= ENSG00000005381.7 TPM= 1.06 Transcript Type= protein_coding
chr17	58321301	58324507	58321301	58324507	-	transcript4135.chr17.nnic@TSPOAP1	transcript4135.chr17.nnic	protein_coding	58324361,58323468,58323298,58322950,58322654,58321301	58324507,58323545,58323381,58323039,58322776,58322412	Gene ID= ENSG00000005379.15 TPM= 4.25 Transcript Type= NA
chr17	58345247	58352423	58345247	58352423	-	ENST00000577396.5@SUPT4H1	ENST00000577396.5	protein_coding	58352065,58351402,58347529,58347188,58345247	58352423,58351508,58347584,58347241,58346313	Gene ID= ENSG00000213246.6 TPM= 1.06 Transcript Type= protein_coding
chr17	58520256	58532068	58520256	58532068	-	transcript4143.chr17.nic@SEPT4	transcript4143.chr17.nic	protein_coding	58531961,58531480,58526682,58526220,58525695,58525078,58521967,58521736,58521545,58521254,58520998,58520743,58520256	58532068,58531551,58526978,58526313,58525781,58525201,58522101,58521853,58521646,58521350,58521160,58520842,58520485	Gene ID= ENSG00000108387.14 TPM= 10.09 Transcript Type= NA
chr17	58520256	58529351	58520256	58529351	-	ENST00000317268.7@SEPT4	ENST00000317268.7	protein_coding	58529115,58526682,58526220,58525695,58525078,58521967,58521736,58521545,58521254,58520998,58520743,58520256	58529351,58526978,58526313,58525781,58525201,58522101,58521853,58521646,58521350,58521160,58520842,58520485	Gene ID= ENSG00000108387.14 TPM= 9.03 Transcript Type= protein_coding
chr17	58520256	58532108	58520256	58532108	-	transcript4148.chr17.nic@SEPT4	transcript4148.chr17.nic	protein_coding	58531961,58526932,58526220,58525695,58525078,58521967,58521736,58521545,58521254,58520998,58520743,58520256	58532108,58526978,58526313,58525781,58525201,58522101,58521853,58521646,58521350,58521160,58520842,58520485	Gene ID= ENSG00000108387.14 TPM= 10.62 Transcript Type= NA
chr17	58520256	58532068	58520256	58532068	-	transcript4149.chr17.nic@SEPT4	transcript4149.chr17.nic	protein_coding	58531961,58531480,58526220,58525695,58525078,58521967,58521736,58521545,58521254,58520998,58520743,58520256	58532068,58531551,58526313,58525781,58525201,58522101,58521853,58521646,58521350,58521160,58520842,58520485	Gene ID= ENSG00000108387.14 TPM= 4.25 Transcript Type= NA
chr17	58520256	58532059	58520256	58532059	-	transcript4153.chr17.nic@SEPT4	transcript4153.chr17.nic	protein_coding	58531961,58526220,58525695,58525078,58521967,58521736,58521545,58521254,58520998,58520743,58520256	58532059,58526313,58525781,58525201,58522101,58521853,58521646,58521350,58521160,58520842,58520485	Gene ID= ENSG00000108387.14 TPM= 6.37 Transcript Type= NA
chr17	58520299	58529303	58520299	58529303	-	ENST00000580844.5@SEPT4	ENST00000580844.5	protein_coding	58529115,58526220,58525695,58525078,58521967,58521736,58521545,58521254,58520998,58520743,58520299	58529303,58526313,58525781,58525201,58522101,58521853,58521646,58521350,58521160,58520842,58520485	Gene ID= ENSG00000108387.14 TPM= 1.06 Transcript Type= protein_coding
chr17	58692573	58735611	58692573	58735611	+	ENST00000337432.8@RAD51C	ENST00000337432.8	protein_coding	58692573,58694931,58696693,58703196,58709859,58720746,58724040,58732484,58734118	58692788,58695189,58696859,58703329,58709990,58720812,58724100,58732544,58735611	Gene ID= ENSG00000108384.14 TPM= 11.68 Transcript Type= protein_coding
chr17	58692574	58734331	58692574	58734331	+	transcript4158.chr17.nic@RAD51C	transcript4158.chr17.nic	protein_coding	58692574,58694931,58696693,58703196,58709859,58720746,58724040,58732484,58734118	58692632,58695189,58696859,58703329,58709990,58720812,58724100,58732544,58734331	Gene ID= ENSG00000108384.14 TPM= 2.12 Transcript Type= NA
chr17	58692573	58734331	58692573	58734331	+	transcript4159.chr17.nic@RAD51C	transcript4159.chr17.nic	protein_coding	58692573,58694931,58696693,58703196,58709859,58720746,58732484,58734118	58692788,58695189,58696859,58703329,58709990,58720812,58732544,58734331	Gene ID= ENSG00000108384.14 TPM= 4.25 Transcript Type= NA
chr17	58692628	58695336	58692628	58695336	+	ENST00000421782.3@RAD51C	ENST00000421782.3	protein_coding	58692628,58694931	58692788,58695336	Gene ID= ENSG00000108384.14 TPM= 3.19 Transcript Type= protein_coding
chr17	58998202	59106721	58998202	59106721	-	ENST00000262294.11@TRIM37	ENST00000262294.11	protein_coding	59106441,59104293,59091300,59088291,59084002,59081097,59079754,59075647,59070823,59064355,59062567,59061032,59056875,59051214,59049178,59047683,59041813,59031896,59028415,59017296,59015610,59012328,59001598,58998202	59106721,59104394,59091340,59088407,59084089,59081219,59079877,59075714,59070947,59064405,59062648,59061108,59057054,59051328,59049393,59047819,59041898,59032090,59028723,59017424,59015799,59012446,59001714,58999459	Gene ID= ENSG00000108395.13 TPM= 11.68 Transcript Type= protein_coding
chr17	59109951	59155269	59109951	59155269	-	ENST00000330137.11@SKA2	ENST00000330137.11	protein_coding	59155131,59131281,59119319,59109951	59155269,59131367,59119495,59112345	Gene ID= ENSG00000182628.12 TPM= 7.44 Transcript Type= protein_coding
chr17	59111956	59155248	59111956	59155248	-	ENST00000581068.5@SKA2	ENST00000581068.5	protein_coding	59155131,59131281,59111956	59155248,59131367,59112345	Gene ID= ENSG00000182628.12 TPM= 1.06 Transcript Type= protein_coding
chr17	59210010	59215247	59210010	59215247	+	ENST00000300917.9@SMG8	ENST00000300917.9	protein_coding	59210010,59212341,59212729,59214805	59211810,59212486,59213601,59215247	Gene ID= ENSG00000167447.12 TPM= 13.81 Transcript Type= protein_coding
chr17	59331702	59401729	59331702	59401729	+	ENST00000312655.8@YPEL2	ENST00000312655.8	protein_coding	59331702,59353215,59388327,59389360,59397101	59331824,59353526,59388370,59389468,59401729	Gene ID= ENSG00000175155.8 TPM= 57.36 Transcript Type= protein_coding
chr17	59331721	59356303	59331721	59356303	+	ENST00000582192.1@YPEL2	ENST00000582192.1	protein_coding	59331721,59353215	59331824,59356303	Gene ID= ENSG00000175155.8 TPM= 8.5 Transcript Type= retained_intron
chr17	59565525	59608345	59565525	59608345	+	ENST00000251241.8@DHX40	ENST00000251241.8	protein_coding	59565525,59566627,59570518,59573116,59573740,59574188,59575340,59577266,59579472,59579697,59586153,59587896,59598737,59599375,59602522,59605115,59605446,59607033	59565783,59566794,59570663,59573235,59573967,59574254,59575471,59577365,59579558,59579879,59586233,59588053,59598851,59599483,59602616,59605184,59605674,59608345	Gene ID= ENSG00000108406.9 TPM= 19.12 Transcript Type= protein_coding
chr17	59565632	59608345	59565632	59608345	+	transcript4193.chr17.nnic@DHX40	transcript4193.chr17.nnic	protein_coding	59565632,59566109,59570518,59573116,59573740,59574188,59575340,59577266,59579472,59579697,59586153,59587896,59598737,59599375,59602522,59605115,59605446,59607033	59565783,59566328,59570663,59573235,59573967,59574254,59575471,59577365,59579558,59579879,59586233,59588053,59598851,59599483,59602616,59605184,59605674,59608345	Gene ID= ENSG00000108406.9 TPM= 5.31 Transcript Type= NA
chr17	59618553	59619714	59618553	59619714	-	ENST00000611877.1@AC091271.1	ENST00000611877.1	lincRNA	59618553	59619714	Gene ID= ENSG00000273702.1 TPM= 1.06 Transcript Type= lincRNA
chr17	59619676	59695112	59619676	59695112	+	transcript4197.chr17.nic@CLTC	transcript4197.chr17.nic	protein_coding	59619676,59644276,59647398,59648240,59651203,59655854,59660391,59661443,59663842,59664787,59666103,59666480,59666797,59668777,59673647,59674701,59676954,59679397,59680912,59681295,59681647,59682271,59682629,59682907,59683095,59683387,59683625,59683875,59685056,59685587,59687001,59690636,59693728	59620173,59644483,59647666,59648401,59651316,59656027,59660588,59661643,59663994,59664909,59666240,59666644,59666977,59668940,59673772,59674843,59677188,59679519,59681057,59681478,59681839,59682428,59682793,59683014,59683262,59683536,59683756,59683985,59685226,59685808,59687021,59690711,59695112	Gene ID= ENSG00000141367.11 TPM= 14.34 Transcript Type= NA
chr17	59687489	59690067	59687489	59690067	-	transcript4202.chr17.nnic@NA	transcript4202.chr17.nnic	NA	59687489	59690067	Gene ID= novel_gene_chr17_4203 TPM= 2.12 Transcript Type= NA
chr17	59697308	59707626	59697308	59707626	-	ENST00000409433.2@PTRH2	ENST00000409433.2	protein_coding	59707371,59698871,59697308	59707626,59700189,59697978	Gene ID= ENSG00000141378.14 TPM= 2.12 Transcript Type= protein_coding
chr17	59697306	59707598	59697306	59707598	-	ENST00000393038.2@PTRH2	ENST00000393038.2	protein_coding	59707371,59697306	59707598,59697978	Gene ID= ENSG00000141378.14 TPM= 11.68 Transcript Type= protein_coding
chr17	59707655	59840593	59707655	59840593	+	transcript4206.chr17.nic@VMP1	transcript4206.chr17.nic	protein_coding	59707655,59731421,59735338,59737453,59738837,59764971,59773754,59808796,59811670,59817712,59834012,59838295,59839768	59707748,59731522,59735473,59737543,59738947,59765138,59773885,59808876,59811786,59817773,59834050,59838397,59840593	Gene ID= ENSG00000062716.12 TPM= 6.37 Transcript Type= NA
chr17	59707465	59841092	59707465	59841092	+	ENST00000262291.8@VMP1	ENST00000262291.8	protein_coding	59707465,59731421,59735338,59737453,59738837,59764971,59773754,59808796,59811670,59817712,59838295,59839768	59707748,59731522,59735473,59737543,59738947,59765138,59773885,59808876,59811786,59817773,59838397,59841092	Gene ID= ENSG00000062716.12 TPM= 44.61 Transcript Type= protein_coding
chr17	59837931	59842255	59837931	59842255	+	ENST00000592790.1@VMP1	ENST00000592790.1	protein_coding	59837931	59842255	Gene ID= ENSG00000062716.12 TPM= 147.64 Transcript Type= retained_intron
chr17	59859482	59892945	59859482	59892945	-	ENST00000325752.7@TUBD1	ENST00000325752.7	protein_coding	59892697,59890831,59886083,59880894,59878103,59874539,59866609,59863664,59859482	59892945,59891041,59886230,59881110,59878334,59874703,59866749,59863847,59860424	Gene ID= ENSG00000108423.14 TPM= 2.12 Transcript Type= protein_coding
chr17	59893046	59950421	59893046	59950421	+	ENST00000393021.7@RPS6KB1	ENST00000393021.7	protein_coding	59893046,59893796,59910562,59912684,59914635,59926435,59930117,59931622,59934170,59934434,59935193,59936215,59936464,59940836,59945406,59946551	59893325,59893924,59910611,59912804,59914703,59926582,59930174,59931722,59934260,59934524,59935300,59936277,59936541,59940943,59945518,59950421	Gene ID= ENSG00000108443.13 TPM= 3.19 Transcript Type= protein_coding
chr17	59952396	59964761	59952396	59964761	-	ENST00000466544.5@RNFT1	ENST00000466544.5	protein_coding	59964608,59962827,59958291,59957224,59956488,59954045,59952396	59964761,59963284,59958444,59957382,59956553,59954146,59953111	Gene ID= ENSG00000189050.15 TPM= 2.12 Transcript Type= nonsense_mediated_decay
chr17	59952362	59964734	59952362	59964734	-	ENST00000482446.5@RNFT1	ENST00000482446.5	protein_coding	59964608,59962827,59962540,59958291,59957224,59956488,59954045,59952362	59964734,59963284,59962616,59958444,59957382,59956553,59954146,59953111	Gene ID= ENSG00000189050.15 TPM= 1.06 Transcript Type= nonsense_mediated_decay
chr17	59964832	59973104	59964832	59973104	+	ENST00000593015.5@AC005702.1	ENST00000593015.5	lincRNA	59964832,59966403,59972835	59965188,59966467,59973104	Gene ID= ENSG00000267302.5 TPM= 1.06 Transcript Type= lincRNA
chr17	60043194	60078931	60043194	60078931	-	ENST00000184956.10@HEATR6	ENST00000184956.10	protein_coding	60078696,60076130,60073746,60073164,60072215,60070706,60069711,60067434,60066209,60059890,60059422,60057048,60056115,60055515,60050843,60049580,60048264,60047309,60046025,60043194	60078931,60076237,60073886,60073279,60072329,60070807,60069848,60067732,60066386,60060096,60059521,60057403,60056237,60055601,60050977,60049702,60048388,60047405,60046229,60044134	Gene ID= ENSG00000068097.14 TPM= 7.44 Transcript Type= protein_coding
chr17	60149936	60159540	60149936	60159540	+	ENST00000300900.8@CA4	ENST00000300900.8	protein_coding	60149936,60155314,60156560,60157427,60157690,60158061,60158283,60159230	60150092,60155367,60156715,60157572,60157788,60158127,60158446,60159540	Gene ID= ENSG00000167434.9 TPM= 2.12 Transcript Type= protein_coding
chr17	60231516	60231646	60231516	60231646	-	ENST00000516768.1@SCARNA20	ENST00000516768.1	scaRNA	60231516	60231646	Gene ID= ENSG00000252577.1 TPM= 1.06 Transcript Type= scaRNA
chr17	60447268	60526250	60447268	60526250	-	transcript4243.chr17.nic@APPBP2	transcript4243.chr17.nic	protein_coding	60525794,60500399,60496413,60494466,60479148,60466291,60464021,60461994,60461810,60460663,60456296,60454302,60451880,60447268	60526250,60500487,60496441,60494617,60479271,60466459,60464110,60462061,60461915,60460787,60456381,60454492,60452045,60447834	Gene ID= ENSG00000062725.9 TPM= 3.19 Transcript Type= NA
chr17	60443149	60526219	60443149	60526219	-	ENST00000083182.7@APPBP2	ENST00000083182.7	protein_coding	60525794,60500399,60494466,60479148,60466291,60464021,60461994,60461810,60460663,60456296,60454302,60451880,60443149	60526219,60500487,60494617,60479271,60466459,60464110,60462061,60461915,60460787,60456381,60454492,60452045,60447834	Gene ID= ENSG00000062725.9 TPM= 5.31 Transcript Type= protein_coding
chr17	61393454	61395575	61393454	61395575	-	transcript4267.chr17.nnic@NA	transcript4267.chr17.nnic	NA	61393454	61395575	Gene ID= novel_gene_chr17_4268 TPM= 2.12 Transcript Type= NA
chr17	61393457	61399606	61393457	61399606	-	ENST00000590421.1@TBX2-AS1	ENST00000590421.1	antisense_RNA	61399037,61393457	61399606,61393747	Gene ID= ENSG00000267280.5 TPM= 1.06 Transcript Type= antisense_RNA
chr17	61393458	61399588	61393458	61399588	-	ENST00000591313.5@TBX2-AS1	ENST00000591313.5	antisense_RNA	61399239,61393458	61399588,61393747	Gene ID= ENSG00000267280.5 TPM= 1.06 Transcript Type= antisense_RNA
chr17	61399896	61409425	61399896	61409425	+	ENST00000240328.3@TBX2	ENST00000240328.3	protein_coding	61399896,61401684,61403061,61404421,61404606,61405202,61408054	61400571,61401951,61403207,61404497,61404769,61405836,61409425	Gene ID= ENSG00000121068.13 TPM= 2.12 Transcript Type= protein_coding
chr17	61942605	62065282	61942605	62065282	-	ENST00000397786.6@MED13	ENST00000397786.6	protein_coding	62065140,62063067,62052537,62035463,62033787,62031444,62029851,62029541,62010550,61995152,61992540,61987007,61985000,61984651,61984171,61982198,61972727,61968035,61966462,61965006,61962752,61961588,61960867,61956339,61955680,61955382,61952965,61950825,61946917,61942605	62065282,62063301,62052705,62035608,62033984,62031638,62030013,62029651,62011233,61995365,61992621,61987128,61985090,61984865,61984367,61983114,61972888,61968258,61966651,61965468,61962971,61961779,61961090,61956481,61955838,61955567,61953113,61950998,61947017,61946600	Gene ID= ENSG00000108510.9 TPM= 8.5 Transcript Type= protein_coding
chr17	62006969	62008034	62006969	62008034	+	transcript4275.chr17.nnic@NA	transcript4275.chr17.nnic	NA	62006969	62008034	Gene ID= novel_gene_chr17_4276 TPM= 7.44 Transcript Type= NA
chr17	62048126	62050510	62048126	62050510	+	transcript4273.chr17.nnic@NA	transcript4273.chr17.nnic	NA	62048126	62050510	Gene ID= novel_gene_chr17_4274 TPM= 11.68 Transcript Type= NA
chr17	62423867	62450093	62423867	62450093	+	ENST00000311506.9@METTL2A	ENST00000311506.9	protein_coding	62423867,62424219,62426299,62427788,62435232,62440617,62444837,62447701,62448575	62424012,62424310,62426654,62427837,62435292,62440756,62444943,62447766,62450093	Gene ID= ENSG00000087995.15 TPM= 9.56 Transcript Type= protein_coding
chr17	62423875	62448914	62423875	62448914	+	ENST00000333483.14@METTL2A	ENST00000333483.14	protein_coding	62423875,62426299,62427788,62435232,62440617,62444837,62447701,62448575	62424310,62426654,62427837,62435292,62440756,62444943,62447766,62448914	Gene ID= ENSG00000087995.15 TPM= 5.31 Transcript Type= retained_intron
chr17	62478837	62613489	62478837	62613489	+	transcript4284.chr17.nic@TLK2	transcript4284.chr17.nic	protein_coding	62478837,62481124,62520773,62522204,62523134,62524236,62536170,62552302,62553663,62560016,62565001,62573215,62576709,62578477,62580111,62586135,62596585,62600651,62602042,62606130,62608041,62612392	62479290,62481206,62520844,62522273,62523177,62524331,62536337,62552397,62553755,62560126,62565137,62573367,62576775,62578574,62580192,62586226,62596674,62600820,62602180,62606241,62608148,62613489	Gene ID= ENSG00000146872.17 TPM= 7.97 Transcript Type= NA
chr17	62479025	62613490	62479025	62613490	+	ENST00000346027.9@TLK2	ENST00000346027.9	protein_coding	62479025,62481121,62520773,62522204,62523134,62524236,62536170,62552302,62553663,62560016,62565001,62573215,62576709,62578477,62580111,62586135,62596585,62600651,62602042,62606130,62608041,62612392	62479290,62481206,62520844,62522273,62523177,62524331,62536337,62552397,62553755,62560126,62565137,62573367,62576775,62578574,62580192,62586226,62596674,62600820,62602180,62606241,62608148,62613490	Gene ID= ENSG00000146872.17 TPM= 7.97 Transcript Type= protein_coding
chr17	62627401	62693597	62627401	62693597	+	ENST00000303375.9@MRC2	ENST00000303375.9	protein_coding	62627401,62664548,62666094,62666455,62666757,62667390,62671649,62671998,62674063,62675790,62676383,62677269,62678504,62679800,62680170,62680418,62680800,62681062,62681837,62682235,62688289,62688501,62688852,62689522,62689894,62690156,62690642,62690949,62692112,62692231	62627920,62664949,62666267,62666619,62666870,62667533,62671837,62672152,62674170,62675905,62676531,62677486,62678646,62679902,62680308,62680453,62680960,62681129,62681937,62682377,62688403,62688664,62688960,62689760,62690062,62690305,62690761,62691128,62692138,62693597	Gene ID= ENSG00000011028.13 TPM= 63.73 Transcript Type= protein_coding
chr17	62689540	62693553	62689540	62693553	+	transcript4295.chr17.nic@MRC2	transcript4295.chr17.nic	protein_coding	62689540,62690156,62690642,62690949,62692112,62692231	62690062,62690305,62690761,62691128,62692138,62693553	Gene ID= ENSG00000011028.13 TPM= 8.5 Transcript Type= NA
chr17	63432304	63446378	63432304	63446378	-	ENST00000360793.7@CYB561	ENST00000360793.7	protein_coding	63446245,63437346,63436054,63435688,63435086,63432304	63446378,63437560,63436152,63435791,63435243,63434594	Gene ID= ENSG00000008283.15 TPM= 6.37 Transcript Type= protein_coding
chr17	63550482	63594266	63550482	63594266	+	ENST00000431926.5@DCAF7	ENST00000431926.5	protein_coding	63550482,63578470,63579337,63579825,63583502,63585211,63589000,63594203	63550815,63578628,63579448,63579943,63583711,63585328,63589237,63594266	Gene ID= ENSG00000136485.14 TPM= 7.44 Transcript Type= nonsense_mediated_decay
chr17	63550461	63594266	63550461	63594266	+	ENST00000614556.4@DCAF7	ENST00000614556.4	protein_coding	63550461,63578470,63579337,63579825,63583502,63585211,63589000	63550815,63578628,63579448,63579943,63583711,63585328,63594266	Gene ID= ENSG00000136485.14 TPM= 37.18 Transcript Type= protein_coding
chr17	63551822	63557513	63551822	63557513	+	transcript4314.chr17.nnic@NA	transcript4314.chr17.nnic	NA	63551822	63557513	Gene ID= novel_gene_chr17_4315 TPM= 2.12 Transcript Type= NA
chr17	63580509	63582173	63580509	63582173	-	transcript4316.chr17.nnic@NA	transcript4316.chr17.nnic	NA	63580509	63582173	Gene ID= novel_gene_chr17_4317 TPM= 3.19 Transcript Type= NA
chr17	63600872	63608365	63600872	63608365	+	ENST00000258975.6@TACO1	ENST00000258975.6	protein_coding	63600872,63604534,63606313,63607287,63607802	63601363,63604640,63606440,63607464,63608365	Gene ID= ENSG00000136463.7 TPM= 52.05 Transcript Type= protein_coding
chr17	63622426	63695107	63622426	63695107	+	transcript4328.chr17.nnic@MAP3K3	transcript4328.chr17.nnic	protein_coding	63622426,63632681,63646034,63652557,63657794,63666940,63681766,63685517,63688527,63688789,63689544,63690264,63691102,63691733,63693549	63622763,63632802,63646074,63652656,63657907,63667060,63681899,63685590,63688594,63688881,63689735,63690412,63691233,63691862,63695107	Gene ID= ENSG00000198909.7 TPM= 14.34 Transcript Type= NA
chr17	63622440	63695105	63622440	63695105	+	ENST00000361733.7@MAP3K3	ENST00000361733.7	protein_coding	63622440,63632681,63646034,63652557,63657794,63666940,63681766,63685517,63688527,63688789,63689544,63690264,63691102,63691733,63692242,63693549	63622763,63632802,63646074,63652656,63657907,63667060,63681899,63685590,63688594,63688881,63689735,63690412,63691233,63691862,63692419,63695105	Gene ID= ENSG00000198909.7 TPM= 147.11 Transcript Type= protein_coding
chr17	63675755	63681032	63675755	63681032	+	transcript4339.chr17.nnic@NA	transcript4339.chr17.nnic	NA	63675755	63681032	Gene ID= novel_gene_chr17_4340 TPM= 2.12 Transcript Type= NA
chr17	63680805	63683484	63680805	63683484	-	transcript4341.chr17.nnic@NA	transcript4341.chr17.nnic	NA	63680805	63683484	Gene ID= novel_gene_chr17_4342 TPM= 3.19 Transcript Type= NA
chr17	63697816	63699504	63697816	63699504	-	transcript4347.chr17.nic@LIMD2	transcript4347.chr17.nic	protein_coding	63699257,63699028,63698799,63697816	63699504,63699069,63698938,63698711	Gene ID= ENSG00000136490.8 TPM= 5.31 Transcript Type= NA
chr17	63702819	63741875	63702819	63741875	-	ENST00000336174.11@STRADA	ENST00000336174.11	protein_coding	63741741,63728334,63726638,63723298,63714006,63713406,63710728,63710491,63707247,63706635,63704341,63704005,63702819	63741875,63728413,63726695,63723326,63714108,63713527,63710836,63710614,63707418,63706739,63704582,63704047,63703751	Gene ID= ENSG00000266173.6 TPM= 9.56 Transcript Type= protein_coding
chr17	63702819	63741860	63702819	63741860	-	ENST00000638708.1@STRADA	ENST00000638708.1	protein_coding	63741741,63728334,63714006,63713406,63710728,63710491,63707247,63706635,63704341,63704005,63702819	63741860,63728413,63714108,63713527,63710836,63710614,63707418,63706739,63704582,63704047,63703751	Gene ID= ENSG00000266173.6 TPM= 3.19 Transcript Type= protein_coding
chr17	63745250	63773775	63745250	63773775	-	ENST00000225726.9@CCDC47	ENST00000225726.9	protein_coding	63773412,63765912,63764740,63764016,63761230,63760914,63756469,63756240,63754433,63752741,63752320,63751940,63745250	63773775,63766194,63764847,63764190,63761351,63760979,63756570,63756350,63754518,63752799,63752429,63752107,63746961	Gene ID= ENSG00000108588.13 TPM= 178.44 Transcript Type= protein_coding
chr17	63773863	63819317	63773863	63819317	+	ENST00000578681.5@DDX42	ENST00000578681.5	protein_coding	63773863,63775108,63787034,63792412,63798038,63799589,63800468,63805071,63806535,63807724,63808820,63809560,63810513,63811076,63811932,63813228,63815563,63816868,63817694	63774376,63775178,63787270,63792562,63798099,63799625,63800617,63805175,63806654,63807900,63808948,63809659,63810560,63811173,63812208,63813454,63815673,63816966,63819317	Gene ID= ENSG00000198231.12 TPM= 32.93 Transcript Type= protein_coding
chr17	63819433	63827671	63819433	63827671	-	ENST00000427159.6@FTSJ3	ENST00000427159.6	protein_coding	63827052,63826836,63826567,63826258,63826056,63825536,63825242,63825048,63824825,63824637,63824331,63824084,63823817,63821984,63821723,63821354,63821030,63820839,63820255,63820079,63819433	63827671,63826928,63826672,63826304,63826135,63825635,63825436,63825163,63824929,63824737,63824411,63824239,63823952,63822168,63821843,63821643,63821115,63820938,63820438,63820173,63819994	Gene ID= ENSG00000108592.16 TPM= 31.33 Transcript Type= protein_coding
chr17	63819433	63827064	63819433	63827064	-	transcript4369.chr17.nic@FTSJ3	transcript4369.chr17.nic	protein_coding	63826836,63826567,63826258,63826056,63825536,63825242,63825048,63824825,63824637,63824331,63824084,63823817,63821984,63821723,63821354,63821030,63820839,63820255,63820079,63819433	63827064,63826672,63826304,63826135,63825635,63825436,63825163,63824929,63824737,63824411,63824239,63823952,63822168,63821843,63821643,63821115,63820938,63820438,63820173,63819994	Gene ID= ENSG00000108592.16 TPM= 16.46 Transcript Type= NA
chr17	63827183	63832019	63827183	63832019	+	ENST00000310144.10@PSMC5	ENST00000310144.10	protein_coding	63827183,63828138,63829494,63829852,63830133,63830271,63830809,63831036,63831327,63831506,63831724,63831916	63827514,63828209,63829563,63829949,63830189,63830501,63830935,63831226,63831425,63831616,63831810,63832019	Gene ID= ENSG00000087191.12 TPM= 258.11 Transcript Type= protein_coding
chr17	63832084	63842940	63832084	63842940	-	ENST00000448276.6@SMARCD2	ENST00000448276.6	protein_coding	63842459,63837441,63837195,63836922,63835412,63834705,63834474,63834167,63833909,63833587,63833298,63833069,63832084	63842940,63837625,63837237,63837044,63835567,63834800,63834575,63834328,63834006,63833722,63833420,63833170,63832991	Gene ID= ENSG00000108604.15 TPM= 28.68 Transcript Type= protein_coding
chr17	63928740	63932354	63928740	63932354	-	ENST00000006750.7@CD79B	ENST00000006750.7	protein_coding	63932195,63931335,63930074,63929770,63929434,63928740	63932354,63931385,63930385,63929888,63929475,63929324	Gene ID= ENSG00000007312.12 TPM= 3.19 Transcript Type= protein_coding
chr17	64002595	64006932	64002595	64006932	-	ENST00000449662.6@ICAM2	ENST00000449662.6	protein_coding	64006631,64005107,64003644,64002595	64006932,64005373,64003964,64002925	Gene ID= ENSG00000108622.10 TPM= 9.56 Transcript Type= protein_coding
chr17	64002595	64005068	64002595	64005068	-	transcript4398.chr17.nic@ICAM2	transcript4398.chr17.nic	protein_coding	64003644,64002595	64005068,64002925	Gene ID= ENSG00000108622.10 TPM= 2.12 Transcript Type= NA
chr17	64002596	64020602	64002596	64020602	-	ENST00000579788.5@ICAM2	ENST00000579788.5	protein_coding	64020523,64006631,64005107,64003644,64002596	64020602,64006735,64005373,64003964,64002925	Gene ID= ENSG00000108622.10 TPM= 15.93 Transcript Type= protein_coding
chr17	64002632	64020607	64002632	64020607	-	ENST00000579687.5@ICAM2	ENST00000579687.5	protein_coding	64020523,64007741,64006631,64005107,64003644,64002632	64020607,64007822,64006735,64005373,64003964,64002925	Gene ID= ENSG00000108622.10 TPM= 1.06 Transcript Type= protein_coding
chr17	64145970	64146307	64145970	64146307	+	transcript4402.chr17.nnic@NA	transcript4402.chr17.nnic	NA	64145970	64146307	Gene ID= novel_gene_chr17_4403 TPM= 8.5 Transcript Type= NA
chr17	64145970	64146309	64145970	64146309	+	ENST00000580828.1@SNHG25	ENST00000580828.1	lincRNA	64145970,64146230	64145995,64146309	Gene ID= ENSG00000266402.3 TPM= 12.75 Transcript Type= lincRNA
chr17	64145970	64146476	64145970	64146476	+	ENST00000582965.1@SNHG25	ENST00000582965.1	lincRNA	64145970,64146230	64146000,64146476	Gene ID= ENSG00000266402.3 TPM= 10.62 Transcript Type= lincRNA
chr17	64147687	64263301	64147687	64263301	-	ENST00000584379.5@TEX2	ENST00000584379.5	protein_coding	64263168,64212574,64194895,64193559,64188168,64177325,64171100,64160801,64154842,64152945,64150841,64147687	64263301,64214242,64195095,64193889,64188415,64177471,64171199,64160933,64154967,64153154,64150961,64149091	Gene ID= ENSG00000136478.7 TPM= 24.43 Transcript Type= protein_coding
chr17	64319415	64390878	64319415	64390878	-	ENST00000563924.5@PECAM1	ENST00000563924.5	protein_coding	64390602,64390489,64377824,64375051,64369750,64363149,64360140,64356111,64354933,64353491,64352390,64350380,64348260,64341634,64329700,64319415	64390878,64390515,64378117,64375356,64370025,64363397,64360415,64356398,64355040,64353518,64352463,64350433,64348322,64341690,64329722,64323845	Gene ID= ENSG00000261371.5 TPM= 28.68 Transcript Type= protein_coding
chr17	64359760	64361291	64359760	64361291	-	transcript4422.chr17.nnic@NA	transcript4422.chr17.nnic	NA	64359760	64361291	Gene ID= novel_gene_chr17_4423 TPM= 2.12 Transcript Type= NA
chr17	64363384	64367019	64363384	64367019	+	transcript4420.chr17.nnic@NA	transcript4420.chr17.nnic	NA	64363384	64367019	Gene ID= novel_gene_chr17_4421 TPM= 5.31 Transcript Type= NA
chr17	64477785	64497102	64477785	64497102	-	transcript4424.chr17.nnic@POLG2	transcript4424.chr17.nnic	protein_coding	64496407,64492895,64492667,64490796,64483964,64483390,64482919,64480289,64477785	64497102,64493021,64492772,64490969,64485868,64483506,64482999,64480389,64477988	Gene ID= ENSG00000256525.6 TPM= 3.19 Transcript Type= NA
chr17	64477785	64497036	64477785	64497036	-	ENST00000539111.6@POLG2	ENST00000539111.6	protein_coding	64496407,64492895,64492667,64490796,64485728,64482919,64480289,64477785	64497036,64493021,64492772,64490969,64485868,64482999,64480389,64477988	Gene ID= ENSG00000256525.6 TPM= 10.62 Transcript Type= protein_coding
chr17	64499622	64506885	64499622	64506885	-	transcript4440.chr17.nic@DDX5	transcript4440.chr17.nic	protein_coding	64506755,64506076,64504677,64504222,64503983,64503803,64503430,64503188,64502926,64502439,64502162,64502010,64500549,64499622	64506885,64506262,64504842,64504318,64504116,64503868,64503571,64503348,64503098,64502549,64502223,64502069,64500773,64500326	Gene ID= ENSG00000108654.13 TPM= 24.96 Transcript Type= NA
chr17	64499616	64506521	64499616	64506521	-	ENST00000225792.9@DDX5	ENST00000225792.9	protein_coding	64506076,64504677,64504222,64503983,64503803,64503430,64503188,64502926,64502439,64502162,64502010,64500549,64499616	64506521,64504842,64504318,64504116,64503868,64503571,64503348,64503098,64502549,64502223,64502069,64500773,64500326	Gene ID= ENSG00000108654.13 TPM= 285.54 Transcript Type= protein_coding
chr17	64499620	64506340	64499620	64506340	-	transcript4452.chr17.nic@DDX5	transcript4452.chr17.nic	protein_coding	64506076,64504677,64504222,64503983,64503803,64503430,64503188,64502926,64502439,64502162,64499620	64506340,64504842,64504318,64504116,64503868,64503571,64503348,64503098,64502549,64502223,64502069	Gene ID= ENSG00000108654.13 TPM= 17.35 Transcript Type= NA
chr17	64499616	64506289	64499616	64506289	-	ENST00000581230.5@DDX5	ENST00000581230.5	protein_coding	64506076,64504677,64504222,64503983,64503803,64503430,64503188,64502926,64502439,64502162,64500549,64499616	64506289,64504842,64504318,64504116,64503868,64503571,64503348,64503098,64502549,64502223,64502069,64500326	Gene ID= ENSG00000108654.13 TPM= 47.62 Transcript Type= retained_intron
chr17	64506991	64537946	64506991	64537946	+	transcript4432.chr17.nnic@CEP95	transcript4432.chr17.nnic	protein_coding	64506991,64508592,64510173,64514248,64516723,64519321,64521402,64522702,64525770,64526071,64529288,64530926,64531890,64532839,64533117,64534585,64536602,64537041,64537603	64507116,64508720,64510280,64514358,64516828,64519436,64521527,64522895,64525882,64526200,64529427,64531018,64532022,64533008,64533191,64534737,64536748,64537112,64537946	Gene ID= ENSG00000258890.6 TPM= 2.66 Transcript Type= NA
chr17	64506399	64537946	64506399	64537946	+	transcript4434.chr17.nic@CEP95	transcript4434.chr17.nic	protein_coding	64506399,64508592,64510173,64514248,64519321,64521402,64522702,64525770,64526071,64527111,64529288,64530926,64531890,64532839,64533117,64534585,64536602,64537041,64537603	64507116,64508720,64510280,64514358,64519436,64521527,64522895,64525882,64526200,64527264,64529427,64531018,64532022,64533008,64533191,64534737,64536748,64537112,64537946	Gene ID= ENSG00000258890.6 TPM= 9.03 Transcript Type= NA
chr17	64545365	64662361	64545365	64662361	-	transcript4462.chr17.nic@SMURF2	transcript4462.chr17.nic	protein_coding	64661829,64606602,64598382,64593991,64593440,64591084,64586086,64583461,64580789,64578492,64571798,64562771,64561500,64557608,64555820,64554856,64551584,64547600,64546263,64545365	64662361,64606640,64598490,64594104,64593573,64591149,64586170,64583544,64580991,64578576,64571956,64562966,64561603,64557722,64555998,64554993,64551704,64547801,64546338,64545947	Gene ID= ENSG00000108854.15 TPM= 5.31 Transcript Type= NA
chr17	64554881	64662361	64554881	64662361	-	transcript4465.chr17.nic@SMURF2	transcript4465.chr17.nic	protein_coding	64661829,64606602,64598382,64593440,64591084,64586086,64583461,64580789,64578492,64571798,64562771,64561500,64557608,64555820,64554881	64662361,64606640,64598490,64593573,64591149,64586170,64583544,64580991,64578576,64571956,64562966,64561603,64557722,64555998,64554993	Gene ID= ENSG00000108854.15 TPM= 3.19 Transcript Type= NA
chr17	64776346	64777826	64776346	64777826	+	transcript4480.chr17.nnic@NA	transcript4480.chr17.nnic	NA	64776346	64777826	Gene ID= novel_gene_chr17_4481 TPM= 12.75 Transcript Type= NA
chr17	64778139	64781575	64778139	64781575	-	transcript4478.chr17.nnic@PLEKHM1P1	transcript4478.chr17.nnic	transcribed_unprocessed_pseudogene	64781434,64780343,64779415,64779263,64778139	64781575,64781039,64780205,64779334,64779079	Gene ID= ENSG00000214176.9 TPM= 6.37 Transcript Type= NA
chr17	64820694	64837136	64820694	64837136	-	ENST00000584585.1@PLEKHM1P1	ENST00000584585.1	transcribed_unprocessed_pseudogene	64837056,64829161,64824625,64822254,64821767,64820694	64837136,64829249,64824872,64822393,64822052,64821017	Gene ID= ENSG00000214176.9 TPM= 1.06 Transcript Type= processed_transcript
chr17	64918483	64919475	64918483	64919475	-	transcript4484.chr17.nnic@NA	transcript4484.chr17.nnic	NA	64918483	64919475	Gene ID= novel_gene_chr17_4485 TPM= 4.25 Transcript Type= NA
chr17	64968038	64975571	64968038	64975571	-	transcript4489.chr17.nnic@AMZ2P1	transcript4489.chr17.nnic	transcribed_unprocessed_pseudogene	64974951,64974555,64973242,64972754,64972534,64968038	64975571,64974641,64973517,64972927,64972662,64968381	Gene ID= ENSG00000214174.8 TPM= 3.72 Transcript Type= NA
chr17	64968038	64975618	64968038	64975618	-	transcript4490.chr17.nnic@AMZ2P1	transcript4490.chr17.nnic	transcribed_unprocessed_pseudogene	64975560,64974555,64973242,64972754,64972534,64968038	64975618,64974641,64973517,64972927,64972662,64968381	Gene ID= ENSG00000214174.8 TPM= 2.66 Transcript Type= NA
chr17	64968038	64975678	64968038	64975678	-	transcript4497.chr17.nnic@AMZ2P1	transcript4497.chr17.nnic	transcribed_unprocessed_pseudogene	64975560,64973232,64972754,64972534,64968038	64975678,64973517,64972927,64972662,64968381	Gene ID= ENSG00000214174.8 TPM= 2.12 Transcript Type= NA
chr17	64968038	64975570	64968038	64975570	-	transcript4498.chr17.nnic@AMZ2P1	transcript4498.chr17.nnic	transcribed_unprocessed_pseudogene	64974951,64973242,64972754,64972534,64968038	64975570,64973517,64972927,64972662,64968381	Gene ID= ENSG00000214174.8 TPM= 2.12 Transcript Type= NA
chr17	64968038	64975584	64968038	64975584	-	transcript4503.chr17.nnic@AMZ2P1	transcript4503.chr17.nnic	transcribed_unprocessed_pseudogene	64975560,64972754,64972534,64968038	64975584,64972927,64972662,64968381	Gene ID= ENSG00000214174.8 TPM= 2.12 Transcript Type= NA
chr17	65010715	65056839	65010715	65056839	-	ENST00000439174.6@GNA13	ENST00000439174.6	protein_coding	65056311,65053502,65018253,65010715	65056839,65053728,65018303,65014829	Gene ID= ENSG00000120063.9 TPM= 7.44 Transcript Type= protein_coding
chr17	65528567	65561647	65528567	65561647	-	ENST00000618960.4@AXIN2	ENST00000618960.4	protein_coding	65561450,65557806,65549520,65541455,65538203,65537324,65536320,65535626,65533912,65528567	65561647,65558736,65549660,65541557,65538343,65537835,65536553,65535721,65534079,65530102	Gene ID= ENSG00000168646.12 TPM= 4.25 Transcript Type= protein_coding
chr17	65528563	65561647	65528563	65561647	-	ENST00000307078.9@AXIN2	ENST00000307078.9	protein_coding	65561450,65557806,65549520,65541455,65538203,65537324,65536869,65536320,65535626,65533912,65528563	65561647,65558736,65549660,65541557,65538343,65537835,65537063,65536553,65535721,65534079,65530102	Gene ID= ENSG00000168646.12 TPM= 3.19 Transcript Type= protein_coding
chr17	65534724	65538698	65534724	65538698	-	transcript4515.chr17.nic@AXIN2	transcript4515.chr17.nic	protein_coding	65538203,65534724	65538698,65537835	Gene ID= ENSG00000168646.12 TPM= 4.25 Transcript Type= NA
chr17	65635541	66191869	65635541	66191869	-	ENST00000392769.6@CEP112	ENST00000392769.6	protein_coding	66191659,66183194,66176830,66175044,66132670,66129746,66096585,66096251,66069915,66066778,66062963,66053736,66029869,66029123,66028313,66027501,66005690,65961463,65927582,65902152,65851804,65750662,65743068,65689129,65640964,65637124,65635541	66191869,66183307,66177020,66175216,66132763,66129823,66096632,66096328,66070001,66066877,66063081,66053879,66030023,66029252,66028405,66027560,66005769,65961598,65927689,65902334,65852034,65750724,65743217,65689218,65641065,65637188,65635974	Gene ID= ENSG00000154240.16 TPM= 1.06 Transcript Type= protein_coding
chr17	66005729	66191855	66005729	66191855	-	ENST00000583358.1@CEP112	ENST00000583358.1	protein_coding	66191659,66183194,66176830,66175044,66132670,66129746,66096585,66096251,66069915,66066778,66062963,66053736,66029869,66029123,66028313,66027501,66005729	66191855,66183307,66177020,66175216,66132763,66129823,66096632,66096328,66070001,66066877,66063081,66053879,66030023,66029252,66028405,66027560,66005769	Gene ID= ENSG00000154240.16 TPM= 1.06 Transcript Type= protein_coding
chr17	67188218	67245203	67188218	67245203	-	transcript4531.chr17.nic@HELZ	transcript4531.chr17.nic	protein_coding	67245148,67243784,67239433,67218595,67215899,67203319,67201129,67195419,67193967,67190157,67189589,67188218	67245203,67243839,67239489,67218822,67215935,67203443,67201185,67195470,67194042,67190355,67189696,67188616	Gene ID= ENSG00000198265.11 TPM= 2.12 Transcript Type= NA
chr17	67077972	67245183	67077972	67245183	-	ENST00000580168.5@HELZ	ENST00000580168.5	protein_coding	67245148,67243784,67239433,67218595,67215899,67203319,67201129,67195419,67193967,67190157,67189589,67188319,67178659,67167463,67166478,67160897,67160261,67151046,67149867,67148569,67145743,67137931,67135970,67128651,67123963,67122970,67120405,67114324,67109116,67108492,67107169,67086829,67077972	67245183,67243839,67239489,67218822,67215935,67203443,67201185,67195470,67194042,67190355,67189696,67188616,67178926,67167796,67166608,67161076,67160365,67151224,67149985,67148714,67145890,67138114,67136198,67128855,67124014,67123160,67120612,67114403,67109686,67108726,67107685,67087081,67078586	Gene ID= ENSG00000198265.11 TPM= 4.25 Transcript Type= protein_coding
chr17	67167526	67245187	67167526	67245187	-	ENST00000417253.7@HELZ	ENST00000417253.7	protein_coding	67245148,67243784,67239433,67218595,67215899,67203319,67201129,67195419,67193967,67190157,67189589,67188319,67178659,67167526	67245187,67243839,67239489,67218822,67215935,67203443,67201185,67195470,67194042,67190355,67189696,67188616,67178926,67167796	Gene ID= ENSG00000198265.11 TPM= 4.25 Transcript Type= non_stop_decay
chr17	67337915	67366591	67337915	67366591	-	transcript4534.chr17.nnic@PSMD12	transcript4534.chr17.nnic	protein_coding	67366412,67357519,67357303,67350229,67348550,67347336,67347116,67345745,67344606,67342186,67339398,67337915	67366591,67357578,67357431,67350336,67348654,67347485,67347250,67345857,67344780,67342263,67341052,67338624	Gene ID= ENSG00000197170.9 TPM= 6.19 Transcript Type= NA
chr17	67377281	67697261	67377281	67697261	+	ENST00000299954.13@PITPNC1	ENST00000299954.13	protein_coding	67377281,67532802,67552257,67578184,67632143,67669508,67675479,67687066,67692572	67378202,67532950,67552345,67578257,67632238,67669663,67675542,67687184,67697261	Gene ID= ENSG00000154217.14 TPM= 10.62 Transcript Type= protein_coding
chr17	67377281	67676222	67377281	67676222	+	transcript4546.chr17.nic@PITPNC1	transcript4546.chr17.nic	protein_coding	67377281,67532802,67552257,67578186,67632143,67669508,67675479	67378202,67532950,67552345,67578257,67632238,67669663,67676222	Gene ID= ENSG00000154217.14 TPM= 2.12 Transcript Type= NA
chr17	67717833	67744531	67717833	67744531	+	ENST00000253247.8@NOL11	ENST00000253247.8	protein_coding	67717833,67719674,67719906,67721378,67722580,67724049,67726460,67734363,67735900,67736666,67737071,67737508,67737847,67738122,67738932,67739516,67743479,67743743	67718088,67719787,67719962,67721526,67722637,67724193,67726648,67734439,67736023,67736754,67737145,67737692,67737972,67738355,67739010,67739608,67743586,67744531	Gene ID= ENSG00000130935.9 TPM= 22.31 Transcript Type= protein_coding
chr17	67717889	67744151	67717889	67744151	+	transcript4552.chr17.nnic@NOL11	transcript4552.chr17.nnic	protein_coding	67717889,67719674,67719906,67721378,67722580,67724049,67726460,67734363,67735900,67736666,67737508,67737847,67738122,67738932,67739516,67743479,67743743	67718088,67719787,67719962,67721526,67722637,67724193,67726648,67734439,67736023,67736754,67737692,67737972,67738355,67739010,67739608,67743586,67744151	Gene ID= ENSG00000130935.9 TPM= 3.19 Transcript Type= NA
chr17	67717942	67744151	67717942	67744151	+	transcript4554.chr17.nic@NOL11	transcript4554.chr17.nic	protein_coding	67717942,67719674,67719906,67721378,67722580,67724049,67726460,67734363,67735900,67736666,67737847,67738122,67738932,67739516,67743479,67743743	67718088,67719787,67719962,67721526,67722637,67724193,67726648,67734439,67736023,67737692,67737972,67738355,67739010,67739608,67743586,67744151	Gene ID= ENSG00000130935.9 TPM= 2.12 Transcript Type= NA
chr17	67944230	67984378	67944230	67984378	+	ENST00000342579.7@BPTF	ENST00000342579.7	protein_coding	67944230,67945409,67947726,67948081,67959541,67963333,67964212,67966572,67975772,67982252	67944372,67945896,67947808,67948306,67959875,67963506,67964404,67966656,67975958,67984378	Gene ID= ENSG00000171634.16 TPM= 2.12 Transcript Type= protein_coding
chr17	67991101	67996431	67991101	67996431	-	ENST00000580729.2@C17orf58	ENST00000580729.2	protein_coding	67996123,67993424,67993044,67991101	67996431,67993984,67993235,67992103	Gene ID= ENSG00000186665.9 TPM= 2.12 Transcript Type= protein_coding
chr17	67991101	67993625	67991101	67993625	-	transcript4566.chr17.nic@C17orf58	transcript4566.chr17.nic	protein_coding	67993044,67991101	67993625,67992103	Gene ID= ENSG00000186665.9 TPM= 2.12 Transcript Type= NA
chr17	67991102	67993552	67991102	67993552	-	ENST00000536693.1@C17orf58	ENST00000536693.1	protein_coding	67992901,67991102	67993552,67992103	Gene ID= ENSG00000186665.9 TPM= 4.25 Transcript Type= retained_intron
chr17	67991130	67993649	67991130	67993649	-	ENST00000334461.7@C17orf58	ENST00000334461.7	protein_coding	67993424,67992901,67991130	67993649,67993235,67992103	Gene ID= ENSG00000186665.9 TPM= 2.12 Transcript Type= protein_coding
chr17	68035519	68046842	68035519	68046842	+	ENST00000330459.7@KPNA2	ENST00000330459.7	protein_coding	68035519,68037110,68037358,68040678,68042085,68042905,68043100,68043838,68044321,68045772,68046504	68035840,68037207,68037495,68040766,68042353,68042999,68043363,68044071,68044503,68045921,68046842	Gene ID= ENSG00000182481.8 TPM= 19.12 Transcript Type= protein_coding
chr17	68101696	68125908	68101696	68125908	+	transcript4576.chr17.nnic@LINC00674	transcript4576.chr17.nnic	transcribed_unprocessed_pseudogene	68101696,68102943,68114422,68125390,68125585	68101959,68103058,68114525,68125480,68125908	Gene ID= ENSG00000237854.3 TPM= 7.44 Transcript Type= NA
chr17	68101718	68115518	68101718	68115518	+	transcript4583.chr17.nnic@LINC00674	transcript4583.chr17.nnic	transcribed_unprocessed_pseudogene	68101718,68102943,68114422,68115061	68101959,68103058,68114525,68115518	Gene ID= ENSG00000237854.3 TPM= 3.19 Transcript Type= NA
chr17	68101638	68125908	68101638	68125908	+	transcript4585.chr17.nnic@LINC00674	transcript4585.chr17.nnic	transcribed_unprocessed_pseudogene	68101638,68114422,68125390,68125585	68101959,68114525,68125480,68125908	Gene ID= ENSG00000237854.3 TPM= 8.5 Transcript Type= NA
chr17	68115615	68116802	68115615	68116802	-	transcript4589.chr17.nnic@NA	transcript4589.chr17.nnic	NA	68115615	68116802	Gene ID= novel_gene_chr17_4590 TPM= 5.31 Transcript Type= NA
chr17	68126666	68129586	68126666	68129586	+	ENST00000620266.1@AC005332.9	ENST00000620266.1	lincRNA	68126666	68129586	Gene ID= ENSG00000278730.1 TPM= 10.62 Transcript Type= lincRNA
chr17	68131293	68132784	68131293	68132784	-	transcript4593.chr17.nnic@NA	transcript4593.chr17.nnic	NA	68131293	68132784	Gene ID= novel_gene_chr17_4594 TPM= 46.74 Transcript Type= NA
chr17	68133201	68135935	68133201	68135935	+	ENST00000622750.1@AC005332.8	ENST00000622750.1	lincRNA	68133201	68135935	Gene ID= ENSG00000277476.1 TPM= 6.37 Transcript Type= lincRNA
chr17	68199083	68200301	68199083	68200301	+	transcript4595.chr17.nnic@NA	transcript4595.chr17.nnic	NA	68199083	68200301	Gene ID= novel_gene_chr17_4596 TPM= 3.19 Transcript Type= NA
chr17	68248016	68257153	68248016	68257153	+	transcript4638.chr17.nic@AMZ2	transcript4638.chr17.nic	protein_coding	68248016,68248640,68250188,68250794,68251050,68254404,68255700,68256814	68248086,68248705,68250480,68250967,68251178,68254567,68255876,68257153	Gene ID= ENSG00000196704.11 TPM= 6.02 Transcript Type= NA
chr17	68248043	68257154	68248043	68257154	+	ENST00000392720.6@AMZ2	ENST00000392720.6	protein_coding	68248043,68248640,68250188,68250794,68251050,68254404,68255700,68256814	68248086,68248705,68250470,68250967,68251178,68254567,68255876,68257154	Gene ID= ENSG00000196704.11 TPM= 38.06 Transcript Type= protein_coding
chr17	68248004	68257164	68248004	68257164	+	ENST00000612294.4@AMZ2	ENST00000612294.4	protein_coding	68248004,68248640,68250188,68250794,68251050,68254404,68255700,68256814	68248157,68248705,68250470,68250967,68251178,68254567,68255876,68257164	Gene ID= ENSG00000196704.11 TPM= 12.21 Transcript Type= protein_coding
chr17	68247574	68257156	68247574	68257156	+	ENST00000359904.7@AMZ2	ENST00000359904.7	protein_coding	68247574,68250188,68250794,68251050,68254404,68255700,68256814	68248705,68250470,68250967,68251178,68254567,68255876,68257156	Gene ID= ENSG00000196704.11 TPM= 146.58 Transcript Type= protein_coding
chr17	68248035	68257139	68248035	68257139	+	ENST00000580753.5@AMZ2	ENST00000580753.5	protein_coding	68248035,68248644,68250188,68250794,68251050,68254404,68255700,68256814	68248058,68248705,68250470,68250967,68251178,68254567,68255876,68257139	Gene ID= ENSG00000196704.11 TPM= 9.56 Transcript Type= protein_coding
chr17	68268622	68274008	68268622	68274008	-	transcript4656.chr17.nic@SLC16A6	transcript4656.chr17.nic	protein_coding	68273927,68272639,68270960,68270839,68268622	68274008,68272767,68271654,68270958,68269346	Gene ID= ENSG00000108932.11 TPM= 2.12 Transcript Type= NA
chr17	68425371	68457539	68425371	68457539	-	transcript4620.chr17.nic@WIPI1	transcript4620.chr17.nic	protein_coding	68457342,68452910,68450728,68444493,68436382,68435620,68434556,68433468,68429996,68428829,68427135,68425371	68457539,68452992,68450897,68444589,68436479,68435712,68434626,68433575,68430160,68428936,68427253,68426175	Gene ID= ENSG00000070540.12 TPM= 29.89 Transcript Type= NA
chr17	68456192	68457488	68456192	68457488	-	transcript4668.chr17.nnic@WIPI1	transcript4668.chr17.nnic	protein_coding	68457342,68456192	68457488,68456484	Gene ID= ENSG00000070540.12 TPM= 3.19 Transcript Type= NA
chr17	68421310	68457499	68421310	68457499	-	ENST00000589316.5@WIPI1	ENST00000589316.5	protein_coding	68457342,68452910,68450728,68444493,68436382,68435620,68434556,68433464,68429996,68428829,68427135,68426075,68421310	68457499,68452992,68450897,68444589,68436479,68435712,68434626,68433575,68430160,68428936,68427253,68426175,68421820	Gene ID= ENSG00000070540.12 TPM= 348.7 Transcript Type= nonsense_mediated_decay
chr17	68421309	68457499	68421309	68457499	-	ENST00000589459.5@WIPI1	ENST00000589459.5	protein_coding	68457342,68450728,68444493,68436382,68435620,68434556,68433464,68429996,68428829,68427135,68426075,68421309	68457499,68450897,68444589,68436479,68435712,68434626,68433575,68430160,68428936,68427253,68426175,68421820	Gene ID= ENSG00000070540.12 TPM= 32.01 Transcript Type= processed_transcript
chr17	68421282	68457421	68421282	68457421	-	ENST00000262139.9@WIPI1	ENST00000262139.9	protein_coding	68457342,68452910,68450728,68444493,68436382,68435620,68434556,68433468,68429996,68428829,68427135,68426075,68421282	68457421,68452992,68450897,68444589,68436479,68435712,68434626,68433575,68430160,68428936,68427253,68426175,68421820	Gene ID= ENSG00000070540.12 TPM= 33.08 Transcript Type= protein_coding
chr17	68429904	68431963	68429904	68431963	-	transcript4671.chr17.nnic@NA	transcript4671.chr17.nnic	NA	68429904	68431963	Gene ID= novel_gene_chr17_4672 TPM= 3.19 Transcript Type= NA
chr17	68512379	68533423	68512379	68533423	+	ENST00000392711.5@PRKAR1A	ENST00000392711.5	protein_coding	68512379,68515394,68522756,68523725,68524016,68524912,68525754,68527840,68528870,68529920,68530277	68512579,68515576,68522926,68523816,68524077,68524958,68525912,68527900,68528991,68530001,68533423	Gene ID= ENSG00000108946.14 TPM= 6.66 Transcript Type= protein_coding
chr17	68512032	68532762	68512032	68532762	+	ENST00000358598.6@PRKAR1A	ENST00000358598.6	protein_coding	68512032,68515394,68522756,68523725,68524016,68524912,68525754,68527840,68528870,68529920,68530277	68512142,68515576,68522926,68523816,68524077,68524958,68525912,68527900,68528991,68530001,68532762	Gene ID= ENSG00000108946.14 TPM= 565.04 Transcript Type= protein_coding
chr17	68512427	68533431	68512427	68533431	+	ENST00000589228.5@PRKAR1A	ENST00000589228.5	protein_coding	68512427,68515394,68522756,68523725,68524016,68524912,68525754,68527840,68528870,68529920,68530277	68512548,68515576,68522926,68523816,68524077,68524958,68525912,68527900,68528991,68530001,68533431	Gene ID= ENSG00000108946.14 TPM= 35.34 Transcript Type= protein_coding
chr17	68512450	68532759	68512450	68532759	+	ENST00000392710.8@PRKAR1A	ENST00000392710.8	protein_coding	68512450,68515394,68522756,68523725,68524016,68524912,68525754,68527840,68528870,68529920,68530277	68512548,68515566,68522926,68523816,68524077,68524958,68525912,68527900,68528991,68530001,68532759	Gene ID= ENSG00000108946.14 TPM= 402.17 Transcript Type= nonsense_mediated_decay
chr17	68512426	68525912	68512426	68525912	+	ENST00000585608.5@PRKAR1A	ENST00000585608.5	protein_coding	68512426,68515394,68522756,68523714,68524016,68524912,68525754	68512548,68515576,68522926,68523816,68524077,68524958,68525912	Gene ID= ENSG00000108946.14 TPM= 1.06 Transcript Type= nonsense_mediated_decay
chr17	68512450	68532762	68512450	68532762	+	ENST00000536854.6@PRKAR1A	ENST00000536854.6	protein_coding	68512450,68514987,68515394,68522756,68523725,68524016,68524912,68525754,68527840,68528870,68529920,68530277	68512548,68515119,68515576,68522926,68523816,68524077,68524958,68525912,68527900,68528991,68530001,68532762	Gene ID= ENSG00000108946.14 TPM= 4.22 Transcript Type= protein_coding
chr17	68536871	68601389	68536871	68601389	-	ENST00000592554.1@FAM20A	ENST00000592554.1	protein_coding	68600263,68555559,68554777,68551873,68543629,68542694,68541985,68540849,68539885,68539337,68536871	68601389,68555743,68554827,68551951,68543721,68542809,68542165,68540958,68539966,68539396,68537741	Gene ID= ENSG00000108950.11 TPM= 2.12 Transcript Type= protein_coding
chr17	68535113	68558390	68535113	68558390	-	ENST00000226094.9@FAM20A	ENST00000226094.9	protein_coding	68558330,68555559,68554777,68551873,68543629,68542694,68541985,68540849,68539885,68539337,68535113	68558390,68555743,68554827,68551951,68543717,68542809,68542165,68540983,68539966,68539396,68537741	Gene ID= ENSG00000108950.11 TPM= 1.06 Transcript Type= processed_transcript
chr17	68589722	68601371	68589722	68601371	-	transcript4728.chr17.nic@FAM20A	transcript4728.chr17.nic	protein_coding	68600263,68589722	68601371,68590349	Gene ID= ENSG00000108950.11 TPM= 4.25 Transcript Type= NA
chr17	68877197	68880267	68877197	68880267	-	ENST00000591459.1@ABCA8	ENST00000591459.1	protein_coding	68877197	68880267	Gene ID= ENSG00000141338.13 TPM= 2.12 Transcript Type= retained_intron
chr17	68931762	68955351	68931762	68955351	-	ENST00000428549.8@ABCA8	ENST00000428549.8	protein_coding	68955219,68949312,68941939,68940758,68936951,68933168,68931762	68955351,68949472,68942039,68940962,68937115,68933271,68932514	Gene ID= ENSG00000141338.13 TPM= 1.06 Transcript Type= retained_intron
chr17	69078702	69141874	69078702	69141874	-	ENST00000284425.6@ABCA6	ENST00000284425.6	protein_coding	69141745,69140608,69137296,69136092,69134639,69133641,69129610,69128619,69124888,69123239,69117898,69115376,69114762,69113618,69113222,69112183,69110801,69107696,69106028,69105462,69102835,69100797,69097920,69096628,69096240,69091143,69089465,69088167,69087353,69086618,69085625,69085028,69084432,69084261,69083212,69082873,69081066,69079210,69078702	69141874,69140748,69137500,69136250,69134742,69133867,69129751,69128804,69125035,69123407,69117956,69115486,69114937,69113737,69113360,69112273,69110940,69107812,69106211,69105628,69102968,69100934,69098027,69096801,69096353,69091262,69089542,69088258,69087473,69086735,69085716,69085182,69084507,69084355,69083331,69083013,69081145,69079265,69079074	Gene ID= ENSG00000154262.12 TPM= 1.06 Transcript Type= protein_coding
chr17	69273971	69327182	69273971	69327182	-	ENST00000593153.5@ABCA5	ENST00000593153.5	protein_coding	69327052,69325699,69314314,69313092,69309262,69308280,69306725,69304669,69302718,69301139,69297191,69294655,69291216,69289862,69289177,69287613,69286221,69285898,69283953,69277641,69273971	69327182,69325817,69314430,69313296,69309423,69308368,69306954,69304810,69302906,69301286,69297359,69294713,69291326,69290037,69289296,69287751,69286311,69286037,69284072,69277842,69274128	Gene ID= ENSG00000154265.15 TPM= 1.06 Transcript Type= protein_coding
chr17	69502286	69542011	69502286	69542011	+	transcript4738.chr17.nic@MAP2K6	transcript4738.chr17.nic	protein_coding	69502286,69505780,69516855,69517500,69519313,69520270,69521049,69523514,69524901,69526570,69536115,69541676	69502417,69505846,69516903,69517613,69519432,69520386,69521100,69523641,69524978,69526709,69536160,69542011	Gene ID= ENSG00000108984.13 TPM= 2.12 Transcript Type= NA
chr17	70167012	70169396	70167012	70169396	-	transcript4741.chr17.nnic@NA	transcript4741.chr17.nnic	NA	70167012	70169396	Gene ID= novel_gene_chr17_4742 TPM= 6.37 Transcript Type= NA
chr17	70168417	70169400	70168417	70169400	-	transcript4739.chr17.nnic@NA	transcript4739.chr17.nnic	NA	70168417	70169400	Gene ID= novel_gene_chr17_4740 TPM= 5.31 Transcript Type= NA
chr17	72071043	72120815	72071043	72120815	-	transcript4748.chr17.nnic@SOX9-AS1	transcript4748.chr17.nnic	processed_transcript	72120763,72084990,72083906,72081921,72071043	72120815,72085045,72084028,72082041,72071231	Gene ID= ENSG00000234899.9 TPM= 8.5 Transcript Type= NA
chr17	72121020	72126420	72121020	72126420	+	ENST00000245479.2@SOX9	ENST00000245479.2	protein_coding	72121020,72122719,72123543	72121822,72122972,72126420	Gene ID= ENSG00000125398.5 TPM= 35.05 Transcript Type= protein_coding
chr17	73193045	73208503	73193045	73208503	+	transcript4760.chr17.nic@COG1	transcript4760.chr17.nic	protein_coding	73193045,73196487,73196900,73197226,73199865,73200566,73201109,73203000,73203632,73205553,73206154,73206708,73207181,73207702,73208314	73193384,73196751,73197081,73197396,73200021,73200776,73201900,73203146,73203793,73205680,73206262,73206817,73207256,73207739,73208503	Gene ID= ENSG00000166685.11 TPM= 4.25 Transcript Type= NA
chr17	73192990	73208507	73192990	73208507	+	ENST00000299886.8@COG1	ENST00000299886.8	protein_coding	73192990,73196507,73196900,73197226,73199865,73200566,73201109,73203000,73203632,73205553,73206154,73206708,73207181,73208314	73193384,73196751,73197081,73197396,73200021,73200776,73201900,73203146,73203793,73205680,73206262,73206817,73207256,73208507	Gene ID= ENSG00000166685.11 TPM= 38.24 Transcript Type= protein_coding
chr17	73192632	73208503	73192632	73208503	+	ENST00000618996.4@COG1	ENST00000618996.4	protein_coding	73192632,73192934,73196507,73196900,73197226,73199865,73200566,73201109,73203000,73203632,73205553,73206154,73206708,73207181,73207702,73208314	73192831,73193384,73196751,73197081,73197396,73200021,73200776,73201900,73203146,73203793,73205680,73206262,73206817,73207256,73207739,73208503	Gene ID= ENSG00000166685.11 TPM= 65.85 Transcript Type= protein_coding
chr17	73194480	73196497	73194480	73196497	-	transcript4782.chr17.nnic@NA	transcript4782.chr17.nnic	NA	73194480	73196497	Gene ID= novel_gene_chr17_4783 TPM= 2.12 Transcript Type= NA
chr17	73207353	73232371	73207353	73232371	-	ENST00000405159.7@FAM104A	ENST00000405159.7	protein_coding	73232086,73227165,73212678,73207353	73232371,73227264,73212740,73209768	Gene ID= ENSG00000133193.12 TPM= 11.68 Transcript Type= protein_coding
chr17	73207353	73232367	73207353	73232367	-	ENST00000403627.7@FAM104A	ENST00000403627.7	protein_coding	73232086,73227165,73207353	73232367,73227264,73209768	Gene ID= ENSG00000133193.12 TPM= 20.18 Transcript Type= protein_coding
chr17	73232403	73248874	73232403	73248874	+	transcript4763.chr17.nic@C17orf80	transcript4763.chr17.nic	protein_coding	73232403,73233220,73235476,73242244,73242896,73247241	73232489,73233325,73236995,73242351,73243003,73248874	Gene ID= ENSG00000141219.15 TPM= 3.19 Transcript Type= NA
chr17	73232637	73248874	73232637	73248874	+	ENST00000268942.12@C17orf80	ENST00000268942.12	protein_coding	73232637,73233220,73235476,73242896,73247241	73232717,73233325,73236995,73243003,73248874	Gene ID= ENSG00000141219.15 TPM= 13.81 Transcript Type= protein_coding
chr17	73232622	73248947	73232622	73248947	+	ENST00000359042.6@C17orf80	ENST00000359042.6	protein_coding	73232622,73233220,73235476,73242244,73242896,73247241	73232717,73233325,73236995,73242351,73243003,73248947	Gene ID= ENSG00000141219.15 TPM= 2.12 Transcript Type= protein_coding
chr17	73232662	73245344	73232662	73245344	+	ENST00000426147.6@C17orf80	ENST00000426147.6	protein_coding	73232662,73233220,73235476,73242244,73242896,73245168	73232717,73233325,73236995,73242351,73243003,73245344	Gene ID= ENSG00000141219.15 TPM= 1.06 Transcript Type= protein_coding
chr17	73282429	73284322	73282429	73284322	+	transcript4790.chr17.nnic@NA	transcript4790.chr17.nnic	NA	73282429	73284322	Gene ID= novel_gene_chr17_4791 TPM= 15.93 Transcript Type= NA
chr17	73283624	73312175	73283624	73312175	-	ENST00000335793.3@CDC42EP4	ENST00000335793.3	protein_coding	73311893,73283624	73312175,73286612	Gene ID= ENSG00000179604.9 TPM= 88.16 Transcript Type= protein_coding
chr17	74203653	74210655	74203653	74210655	+	ENST00000311111.10@RPL38	ENST00000311111.10	protein_coding	74203653,74203918,74204130,74209187,74209804	74203745,74203958,74204190,74209309,74210655	Gene ID= ENSG00000172809.12 TPM= 177.38 Transcript Type= protein_coding
chr17	74203582	74209880	74203582	74209880	+	ENST00000439590.6@RPL38	ENST00000439590.6	protein_coding	74203582,74203918,74204130,74209187,74209804	74203710,74203958,74204190,74209309,74209880	Gene ID= ENSG00000172809.12 TPM= 40.36 Transcript Type= protein_coding
chr17	74203704	74209896	74203704	74209896	+	ENST00000533498.1@RPL38	ENST00000533498.1	protein_coding	74203704,74204130,74209187,74209804	74203958,74204190,74209309,74209896	Gene ID= ENSG00000172809.12 TPM= 13.81 Transcript Type= protein_coding
chr17	74203704	74204190	74203704	74204190	+	ENST00000528433.2@RPL38	ENST00000528433.2	protein_coding	74203704,74203918,74204130	74203770,74203958,74204190	Gene ID= ENSG00000172809.12 TPM= 3.19 Transcript Type= protein_coding
chr17	74203693	74209878	74203693	74209878	+	ENST00000584577.5@RPL38	ENST00000584577.5	protein_coding	74203693,74203918,74204130,74209187,74209813	74203745,74203958,74204190,74209309,74209878	Gene ID= ENSG00000172809.12 TPM= 176.32 Transcript Type= protein_coding
chr17	74213514	74262020	74213514	74262020	+	ENST00000269346.8@TTYH2	ENST00000269346.8	protein_coding	74213514,74222485,74230888,74237294,74243374,74243977,74249011,74249344,74249936,74250265,74252234,74253081,74253755,74260129	74213716,74222657,74230999,74237514,74243469,74244049,74249080,74249399,74250028,74250357,74252376,74253266,74253833,74262020	Gene ID= ENSG00000141540.10 TPM= 22.31 Transcript Type= protein_coding
chr17	74213518	74262020	74213518	74262020	+	transcript4797.chr17.nnic@TTYH2	transcript4797.chr17.nnic	protein_coding	74213518,74222485,74230888,74237294,74243374,74243977,74249011,74249344,74249936,74250265,74252234,74253755,74260129	74213716,74222657,74230999,74237514,74243469,74244049,74249080,74249399,74250028,74250357,74252376,74253833,74262020	Gene ID= ENSG00000141540.10 TPM= 10.62 Transcript Type= NA
chr17	74424805	74447429	74424805	74447429	+	transcript4804.chr17.nic@GPRC5C	transcript4804.chr17.nic	protein_coding	74424805,74439745,74443818,74446849	74424932,74440827,74443912,74447429	Gene ID= ENSG00000170412.16 TPM= 9.38 Transcript Type= NA
chr17	74432155	74447429	74432155	74447429	+	transcript4806.chr17.nic@GPRC5C	transcript4806.chr17.nic	protein_coding	74432155,74439745,74443818,74446849	74432523,74440827,74443912,74447429	Gene ID= ENSG00000170412.16 TPM= 3.01 Transcript Type= NA
chr17	74430913	74447429	74430913	74447429	+	ENST00000392627.5@GPRC5C	ENST00000392627.5	protein_coding	74430913,74439745,74443818,74446849	74432141,74440827,74443912,74447429	Gene ID= ENSG00000170412.16 TPM= 46.02 Transcript Type= protein_coding
chr17	74466416	74484796	74466416	74484796	+	ENST00000360141.7@CD300A	ENST00000360141.7	protein_coding	74466416,74473536,74474532,74477436,74481289,74481726,74484001	74466743,74473874,74474685,74477530,74481326,74481833,74484796	Gene ID= ENSG00000167851.13 TPM= 3.19 Transcript Type= protein_coding
chr17	74737217	74747300	74737217	74747300	+	ENST00000392613.9@RAB37	ENST00000392613.9	protein_coding	74737217,74740768,74742254,74743129,74743288,74744308,74744873,74745008,74745306	74737365,74740878,74742295,74743195,74743340,74744373,74744929,74745084,74747300	Gene ID= ENSG00000172794.19 TPM= 1.06 Transcript Type= protein_coding
chr17	74748652	74769353	74748652	74769353	+	ENST00000262613.9@SLC9A3R1	ENST00000262613.9	protein_coding	74748652,74762012,74763367,74766936,74768147,74768468	74749287,74762173,74763520,74766976,74768236,74769353	Gene ID= ENSG00000109062.11 TPM= 19.12 Transcript Type= protein_coding
chr17	74770547	74776360	74770547	74776360	-	transcript4817.chr17.nnic@NAT9	transcript4817.chr17.nnic	protein_coding	74776267,74775622,74773866,74773576,74772896,74772218,74770547	74776360,74775707,74774042,74773685,74773039,74772277,74771834	Gene ID= ENSG00000109065.11 TPM= 3.13 Transcript Type= NA
chr17	74770547	74776360	74770547	74776360	-	transcript4825.chr17.nic@NAT9	transcript4825.chr17.nic	protein_coding	74776267,74775622,74773576,74772896,74771960,74770547	74776360,74775707,74773685,74773039,74772395,74771858	Gene ID= ENSG00000109065.11 TPM= 13.75 Transcript Type= NA
chr17	74770547	74776360	74770547	74776360	-	transcript4828.chr17.nic@NAT9	transcript4828.chr17.nic	protein_coding	74776267,74775622,74772896,74771960,74770547	74776360,74775707,74773685,74772277,74771858	Gene ID= ENSG00000109065.11 TPM= 3.13 Transcript Type= NA
chr17	74770547	74776360	74770547	74776360	-	transcript4829.chr17.nic@NAT9	transcript4829.chr17.nic	protein_coding	74776267,74775622,74773576,74771960,74770547	74776360,74775707,74773685,74773039,74771858	Gene ID= ENSG00000109065.11 TPM= 4.2 Transcript Type= NA
chr17	74770567	74776339	74770567	74776339	-	ENST00000580301.5@NAT9	ENST00000580301.5	protein_coding	74776267,74775622,74773576,74772896,74772218,74771960,74770567	74776339,74775707,74773685,74773039,74772277,74772054,74771858	Gene ID= ENSG00000109065.11 TPM= 9.77 Transcript Type= protein_coding
chr17	74770581	74776323	74770581	74776323	-	ENST00000583834.5@NAT9	ENST00000583834.5	protein_coding	74776267,74775622,74773576,74772896,74771960,74770581	74776323,74775707,74773685,74773039,74772277,74771858	Gene ID= ENSG00000109065.11 TPM= 8.5 Transcript Type= retained_intron
chr17	74835980	74838480	74835980	74838480	+	transcript4834.chr17.nnic@NA	transcript4834.chr17.nnic	NA	74835980	74838480	Gene ID= novel_gene_chr17_4835 TPM= 3.19 Transcript Type= NA
chr17	74842023	74859875	74842023	74859875	-	ENST00000293190.9@GRIN2C	ENST00000293190.9	protein_coding	74859744,74854694,74852013,74851577,74850556,74850206,74849780,74847852,74847308,74846760,74846066,74844276,74842023	74859875,74855107,74852611,74851691,74850767,74850371,74849933,74847977,74847537,74846920,74846253,74844508,74843553	Gene ID= ENSG00000161509.13 TPM= 1.06 Transcript Type= protein_coding
chr17	74862497	74873023	74862497	74873023	-	ENST00000293195.9@FDXR	ENST00000293195.9	protein_coding	74872866,74872036,74866784,74866446,74866131,74865719,74864824,74864480,74864148,74863896,74863076,74862497	74873023,74872133,74866876,74866568,74866244,74865820,74864931,74864564,74864347,74864067,74863246,74862947	Gene ID= ENSG00000161513.11 TPM= 12.75 Transcript Type= protein_coding
chr17	74950744	74972734	74950744	74972734	-	ENST00000425042.6@HID1	ENST00000425042.6	protein_coding	74972591,74964483,74963740,74962965,74962234,74961873,74960026,74959881,74958911,74958673,74958327,74958141,74955792,74954138,74953545,74953006,74952269,74951905,74950744	74972734,74964632,74963910,74963081,74962340,74961989,74960248,74959937,74959051,74958763,74958478,74958219,74955956,74954365,74953651,74953086,74952360,74952063,74951633	Gene ID= ENSG00000167861.15 TPM= 14.87 Transcript Type= protein_coding
chr17	74957969	74960095	74957969	74960095	-	ENST00000318565.11@HID1	ENST00000318565.11	protein_coding	74960026,74959881,74958911,74958673,74958327,74957969	74960095,74959937,74959051,74958763,74958478,74958219	Gene ID= ENSG00000167861.15 TPM= 1.06 Transcript Type= protein_coding
chr17	74987632	75005800	74987632	75005800	+	ENST00000337231.5@CDR2L	ENST00000337231.5	protein_coding	74987632,74999504,75001341,75002064,75003183	74988122,74999616,75001489,75002228,75005800	Gene ID= ENSG00000109089.7 TPM= 78.6 Transcript Type= protein_coding
chr17	75012674	75021261	75012674	75021261	+	ENST00000301585.9@MRPL58	ENST00000301585.9	protein_coding	75012674,75017078,75019700,75020313,75020488,75020921	75012872,75017114,75019759,75020395,75020657,75021261	Gene ID= ENSG00000167862.9 TPM= 30.8 Transcript Type= protein_coding
chr17	75038863	75046978	75038863	75046978	-	transcript4854.chr17.nnic@ATP5H	transcript4854.chr17.nnic	protein_coding	75046925,75042181,75040092,75039209,75038863	75046978,75042277,75040163,75039271,75039063	Gene ID= ENSG00000167863.11 TPM= 13.01 Transcript Type= NA
chr17	75038863	75046963	75038863	75046963	-	ENST00000301587.8@ATP5H	ENST00000301587.8	protein_coding	75046925,75042529,75042181,75040092,75039209,75038863	75046963,75042659,75042277,75040163,75039271,75039063	Gene ID= ENSG00000167863.11 TPM= 463.37 Transcript Type= protein_coding
chr17	75038863	75046985	75038863	75046985	-	ENST00000344546.8@ATP5H	ENST00000344546.8	protein_coding	75046925,75042529,75042181,75039209,75038863	75046985,75042659,75042277,75039271,75039063	Gene ID= ENSG00000167863.11 TPM= 1.33 Transcript Type= protein_coding
chr17	75047245	75065884	75047245	75065884	+	ENST00000322444.6@KCTD2	ENST00000322444.6	protein_coding	75047245,75049220,75053014,75059510,75062120,75063018	75047589,75049328,75053105,75059605,75062245,75065884	Gene ID= ENSG00000180901.10 TPM= 60.54 Transcript Type= protein_coding
chr17	75087962	75106162	75087962	75106162	+	transcript4864.chr17.nic@SLC16A5	transcript4864.chr17.nic	protein_coding	75087962,75089151,75093589,75098038,75099957,75103970,75105880	75088044,75089304,75093835,75098181,75100816,75104180,75106162	Gene ID= ENSG00000170190.15 TPM= 3.72 Transcript Type= NA
chr17	75087961	75106162	75087961	75106162	+	transcript4866.chr17.nnic@SLC16A5	transcript4866.chr17.nnic	protein_coding	75087961,75089151,75093589,75098038,75100007,75104022,75105880	75088044,75089304,75093835,75098181,75100816,75104180,75106162	Gene ID= ENSG00000170190.15 TPM= 2.12 Transcript Type= NA
chr17	75087960	75106162	75087960	75106162	+	ENST00000329783.8@SLC16A5	ENST00000329783.8	protein_coding	75087960,75089151,75093589,75098038,75100007,75103970,75105880	75088044,75089304,75093835,75098181,75100816,75104180,75106162	Gene ID= ENSG00000170190.15 TPM= 12.21 Transcript Type= protein_coding
chr17	75104334	75106160	75104334	75106160	+	transcript4887.chr17.nnic@NA	transcript4887.chr17.nnic	NA	75104334	75106160	Gene ID= novel_gene_chr17_4888 TPM= 40.36 Transcript Type= NA
chr17	75109987	75130265	75109987	75130265	+	ENST00000245543.5@ARMC7	ENST00000245543.5	protein_coding	75109987,75110463,75128677	75110379,75110606,75130265	Gene ID= ENSG00000125449.6 TPM= 13.81 Transcript Type= protein_coding
chr17	75130223	75131776	75130223	75131776	-	transcript4891.chr17.nnic@NA	transcript4891.chr17.nnic	NA	75130223	75131776	Gene ID= novel_gene_chr17_4892 TPM= 3.19 Transcript Type= NA
chr17	75130228	75131778	75130228	75131778	-	transcript4875.chr17.nic@NT5C	transcript4875.chr17.nic	protein_coding	75131534,75131181,75130965,75130753,75130228	75131778,75131281,75131105,75130867,75130642	Gene ID= ENSG00000125458.6 TPM= 22.84 Transcript Type= NA
chr17	75130228	75131795	75130228	75131795	-	ENST00000245552.6@NT5C	ENST00000245552.6	protein_coding	75131534,75131181,75131045,75130753,75130228	75131795,75131281,75131105,75130867,75130642	Gene ID= ENSG00000125458.6 TPM= 48.33 Transcript Type= protein_coding
chr17	75135248	75154683	75135248	75154683	-	ENST00000409753.7@JPT1	ENST00000409753.7	protein_coding	75154342,75148529,75147556,75146666,75135248	75154683,75148671,75147653,75146684,75136250	Gene ID= ENSG00000189159.15 TPM= 9.56 Transcript Type= protein_coding
chr17	75205679	75208619	75205679	75208619	+	transcript4908.chr17.nic@NUP85	transcript4908.chr17.nic	protein_coding	75205679,75208527	75205794,75208619	Gene ID= ENSG00000125450.10 TPM= 2.12 Transcript Type= NA
chr17	75205691	75235758	75205691	75235758	+	ENST00000245544.8@NUP85	ENST00000245544.8	protein_coding	75205691,75208527,75209823,75211992,75213076,75215754,75218185,75225103,75225342,75225698,75226051,75231340,75231573,75231828,75232851,75233058,75234637,75235100,75235578	75205794,75208620,75209985,75212062,75213119,75215823,75218306,75225237,75225464,75225829,75226157,75231423,75231638,75231979,75232968,75233158,75234788,75235201,75235758	Gene ID= ENSG00000125450.10 TPM= 19.12 Transcript Type= protein_coding
chr17	75236599	75261804	75236599	75261804	-	ENST00000537686.5@GGA3	ENST00000537686.5	protein_coding	75261548,75246712,75246509,75244619,75243447,75243063,75242831,75242336,75241615,75241400,75240812,75240342,75239789,75239375,75238914,75238652,75236599	75261804,75246796,75246584,75244717,75243570,75243166,75242911,75242473,75241696,75241516,75241057,75240412,75240108,75239571,75239083,75238762,75238389	Gene ID= ENSG00000125447.16 TPM= 17.53 Transcript Type= protein_coding
chr17	75236599	75261600	75236599	75261600	-	ENST00000538886.5@GGA3	ENST00000538886.5	protein_coding	75261548,75246712,75246509,75243447,75243063,75242831,75242336,75241615,75241400,75240812,75240342,75239789,75239375,75238914,75238652,75236599	75261600,75246796,75246584,75243570,75243166,75242911,75242473,75241696,75241516,75241057,75240412,75240108,75239571,75239083,75238762,75238389	Gene ID= ENSG00000125447.16 TPM= 15.4 Transcript Type= protein_coding
chr17	75259131	75261606	75259131	75261606	-	transcript4909.chr17.nnic@NA	transcript4909.chr17.nnic	NA	75259131	75261606	Gene ID= novel_gene_chr17_4910 TPM= 2.12 Transcript Type= NA
chr17	75261641	75266363	75261641	75266363	+	transcript4915.chr17.nic@MRPS7	transcript4915.chr17.nic	protein_coding	75261641,75262497,75262804,75263340,75265702,75266193	75261983,75262688,75262867,75263507,75265966,75266363	Gene ID= ENSG00000125445.10 TPM= 31.86 Transcript Type= NA
chr17	75261674	75266373	75261674	75266373	+	ENST00000245539.10@MRPS7	ENST00000245539.10	protein_coding	75261674,75262497,75262804,75263340,75265702	75261983,75262688,75262867,75263507,75266373	Gene ID= ENSG00000125445.10 TPM= 240.05 Transcript Type= protein_coding
chr17	75261912	75266330	75261912	75266330	+	ENST00000579002.5@MRPS7	ENST00000579002.5	protein_coding	75261912,75262804,75263340,75265702	75262688,75262867,75263507,75266330	Gene ID= ENSG00000125445.10 TPM= 1.06 Transcript Type= protein_coding
chr17	75266228	75271218	75266228	75271218	-	ENST00000325102.12@MIF4GD	ENST00000325102.12	protein_coding	75271144,75270114,75268083,75267746,75267538,75266228	75271218,75270245,75268192,75267901,75267630,75266967	Gene ID= ENSG00000125457.13 TPM= 41.42 Transcript Type= protein_coding
chr17	75266264	75271155	75266264	75271155	-	ENST00000577542.5@MIF4GD	ENST00000577542.5	protein_coding	75270943,75270114,75269347,75268083,75267746,75267538,75266264	75271155,75270245,75269469,75268192,75267901,75267630,75266967	Gene ID= ENSG00000125457.13 TPM= 2.12 Transcript Type= protein_coding
chr17	75266247	75271227	75266247	75271227	-	ENST00000579297.5@MIF4GD	ENST00000579297.5	protein_coding	75271144,75270114,75269347,75268083,75267746,75267538,75266247	75271227,75270245,75269469,75268192,75267901,75267630,75266967	Gene ID= ENSG00000125457.13 TPM= 1.06 Transcript Type= protein_coding
chr17	75272981	75289408	75272981	75289408	-	transcript4930.chr17.nic@SLC25A19	transcript4930.chr17.nic	protein_coding	75289354,75288388,75286633,75286304,75283423,75278152,75277353,75272981	75289408,75288591,75286802,75286459,75283593,75278335,75277483,75273639	Gene ID= ENSG00000125454.11 TPM= 2.66 Transcript Type= NA
chr17	75272992	75289390	75272992	75289390	-	ENST00000416858.6@SLC25A19	ENST00000416858.6	protein_coding	75289354,75288502,75286633,75286304,75283423,75278152,75277353,75272992	75289390,75288591,75286802,75286459,75283593,75278335,75277483,75273639	Gene ID= ENSG00000125454.11 TPM= 5.84 Transcript Type= protein_coding
chr17	75273030	75289411	75273030	75289411	-	ENST00000580994.5@SLC25A19	ENST00000580994.5	protein_coding	75289354,75288388,75286633,75286304,75283423,75278152,75277353,75273030	75289411,75288461,75286802,75286459,75283593,75278335,75277483,75273639	Gene ID= ENSG00000125454.11 TPM= 1.06 Transcript Type= protein_coding
chr17	75318076	75405653	75318076	75405653	-	ENST00000316804.9@GRB2	ENST00000316804.9	protein_coding	75405489,75393551,75332700,75325898,75321659,75318076	75405653,75393765,75332797,75326020,75321827,75320553	Gene ID= ENSG00000177885.13 TPM= 43.02 Transcript Type= protein_coding
chr17	75318076	75393864	75318076	75393864	-	ENST00000392564.5@GRB2	ENST00000392564.5	protein_coding	75393551,75332700,75325898,75321659,75318076	75393864,75332797,75326020,75321827,75320553	Gene ID= ENSG00000177885.13 TPM= 31.33 Transcript Type= protein_coding
chr17	75456641	75500090	75456641	75500090	+	ENST00000581085.5@TMEM94	ENST00000581085.5	protein_coding	75456641,75471800,75485428,75485871,75486290,75487932,75488759,75489266,75489576,75490234,75490702,75491049,75491303,75491691,75492474,75492929,75493699,75494627,75494896,75495284,75495544,75495966,75496282,75496730,75497113,75497781,75498175,75498444,75498629,75498912,75499262	75456751,75471929,75485547,75485998,75486426,75488134,75488910,75489368,75489662,75490350,75490758,75491153,75491455,75491900,75492789,75493593,75493916,75494808,75495034,75495399,75495643,75496074,75496471,75496807,75497198,75497862,75498323,75498538,75498722,75499082,75500090	Gene ID= ENSG00000177728.16 TPM= 29.74 Transcript Type= retained_intron
chr17	75516533	75524733	75516533	75524733	+	transcript4953.chr17.nic@TSEN54	transcript4953.chr17.nic	protein_coding	75516533,75516746,75517009,75517161,75517557,75518995,75521409,75521705,75523275,75523663,75524262	75516616,75516910,75517072,75517244,75517655,75519047,75521510,75522521,75523335,75523779,75524733	Gene ID= ENSG00000182173.12 TPM= 2.12 Transcript Type= NA
chr17	75516523	75524733	75516523	75524733	+	transcript4955.chr17.nic@TSEN54	transcript4955.chr17.nic	protein_coding	75516523,75516746,75517009,75517161,75517557,75518995,75521409,75521705,75523663,75524262	75516616,75516910,75517072,75517244,75517655,75519047,75521510,75523335,75523779,75524733	Gene ID= ENSG00000182173.12 TPM= 3.72 Transcript Type= NA
chr17	75516528	75522890	75516528	75522890	+	transcript4961.chr17.nic@TSEN54	transcript4961.chr17.nic	protein_coding	75516528,75516746,75517009,75517161,75517557,75518995,75521409	75516616,75516910,75517072,75517244,75517655,75519047,75522890	Gene ID= ENSG00000182173.12 TPM= 4.25 Transcript Type= NA
chr17	75516553	75524733	75516553	75524733	+	transcript4963.chr17.nic@TSEN54	transcript4963.chr17.nic	protein_coding	75516553,75517009,75517161,75518995,75521409,75523663,75524262	75516910,75517072,75517655,75519047,75523335,75523779,75524733	Gene ID= ENSG00000182173.12 TPM= 3.72 Transcript Type= NA
chr17	75516525	75524739	75516525	75524739	+	ENST00000333213.10@TSEN54	ENST00000333213.10	protein_coding	75516525,75516746,75517009,75517161,75517557,75518995,75521409,75521705,75523275,75523663,75524262	75516616,75516910,75517072,75517244,75517655,75519047,75521510,75522333,75523335,75523779,75524739	Gene ID= ENSG00000182173.12 TPM= 25.49 Transcript Type= protein_coding
chr17	75525739	75575207	75525739	75575207	+	ENST00000392550.7@LLGL2	ENST00000392550.7	protein_coding	75525739,75543397,75556046,75558155,75558512,75559252,75563016,75563331,75563752,75564353,75568476,75568772,75568978,75569221,75569963,75570348,75570950,75571667,75571898,75573014,75573481,75573952,75574213,75574453,75574610,75574871	75525825,75543501,75556143,75558236,75558627,75559410,75563178,75563463,75563806,75564507,75568693,75568839,75569131,75569325,75570255,75570498,75571100,75571783,75572064,75573278,75573631,75573980,75574260,75574495,75574668,75575207	Gene ID= ENSG00000073350.13 TPM= 4.25 Transcript Type= protein_coding
chr17	75525732	75564721	75525732	75564721	+	ENST00000375227.8@LLGL2	ENST00000375227.8	protein_coding	75525732,75543397,75556046,75558155,75558512,75559252,75563016,75563331,75563752,75564353	75525825,75543501,75556143,75558236,75558627,75559410,75563178,75563463,75563806,75564721	Gene ID= ENSG00000073350.13 TPM= 1.06 Transcript Type= protein_coding
chr17	75590751	75593220	75590751	75593220	+	transcript4984.chr17.nic@MYO15B	transcript4984.chr17.nic	protein_coding	75590751,75591977,75592238,75592679	75591712,75592080,75592301,75593220	Gene ID= ENSG00000266714.7 TPM= 2.12 Transcript Type= NA
chr17	75590694	75594116	75590694	75594116	+	transcript4988.chr17.nic@MYO15B	transcript4988.chr17.nic	protein_coding	75590694,75591977,75592238	75591712,75592080,75594116	Gene ID= ENSG00000266714.7 TPM= 2.12 Transcript Type= NA
chr17	75626854	75667189	75626854	75667189	-	ENST00000317905.9@RECQL5	ENST00000317905.9	protein_coding	75667044,75666428,75665051,75662479,75661606,75660955,75658298,75651186,75631450,75631150,75630974,75630779,75630619,75630184,75629708,75628934,75628672,75628218,75627623,75626854	75667189,75666571,75665172,75662997,75661708,75661066,75658460,75651265,75631668,75631249,75631010,75630837,75630692,75630277,75629842,75629475,75628762,75628442,75627692,75627522	Gene ID= ENSG00000108469.14 TPM= 4.25 Transcript Type= protein_coding
chr17	75626854	75667186	75626854	75667186	-	transcript4971.chr17.nnic@RECQL5	transcript4971.chr17.nnic	protein_coding	75667044,75666428,75665051,75662479,75661606,75660955,75658298,75651186,75631450,75631150,75630974,75630779,75630619,75630184,75628934,75628672,75628218,75627623,75626854	75667186,75666571,75665172,75662997,75661708,75661066,75658460,75651265,75631668,75631249,75631010,75630837,75630692,75630277,75629475,75628762,75628442,75627692,75627522	Gene ID= ENSG00000108469.14 TPM= 2.47 Transcript Type= NA
chr17	75626854	75667186	75626854	75667186	-	transcript4972.chr17.nic@RECQL5	transcript4972.chr17.nic	protein_coding	75667044,75666428,75665051,75662479,75658298,75651186,75631450,75631150,75630974,75630779,75630619,75630184,75629708,75628934,75628672,75628218,75627623,75626854	75667186,75666571,75665172,75662997,75658460,75651265,75631668,75631249,75631010,75630837,75630692,75630277,75629842,75629475,75628762,75628442,75627692,75627522	Gene ID= ENSG00000108469.14 TPM= 4.25 Transcript Type= NA
chr17	75626845	75634223	75626845	75634223	-	ENST00000443199.6@RECQL5	ENST00000443199.6	protein_coding	75633459,75631450,75631150,75630974,75630779,75630619,75630184,75629708,75628934,75628672,75628218,75627623,75626845	75634223,75631668,75631249,75631010,75630837,75630692,75630277,75629842,75629475,75628762,75628442,75627692,75627522	Gene ID= ENSG00000108469.14 TPM= 2.84 Transcript Type= processed_transcript
chr17	75633434	75641404	75633434	75641404	+	ENST00000375215.3@SMIM5	ENST00000375215.3	protein_coding	75633434,75640166,75640791	75634202,75640328,75641404	Gene ID= ENSG00000204323.5 TPM= 2.12 Transcript Type= protein_coding
chr17	75667328	75706757	75667328	75706757	+	transcript4995.chr17.nic@SAP30BP	transcript4995.chr17.nic	protein_coding	75667328,75668516,75671816,75693440,75699783,75702480,75703311,75703808,75704756,75705611,75706008,75706340	75667478,75668625,75671863,75693482,75699871,75702571,75703371,75703859,75704814,75705693,75706092,75706757	Gene ID= ENSG00000161526.14 TPM= 2.12 Transcript Type= NA
chr17	75667116	75708059	75667116	75708059	+	ENST00000584667.5@SAP30BP	ENST00000584667.5	protein_coding	75667116,75668516,75671816,75693440,75699783,75702480,75703311,75703808,75704756,75706008,75706340	75667478,75668625,75671863,75693482,75699871,75702571,75703371,75703859,75704814,75706092,75708059	Gene ID= ENSG00000161526.14 TPM= 45.67 Transcript Type= protein_coding
chr17	75757944	75765711	75757944	75765711	-	ENST00000588479.5@GALK1	ENST00000588479.5	protein_coding	75764972,75763897,75763320,75763014,75762704,75758449,75758210,75757944	75765711,75764086,75763439,75763149,75762885,75758599,75758372,75758127	Gene ID= ENSG00000108479.11 TPM= 23.37 Transcript Type= protein_coding
chr17	75776434	75779779	75776434	75779779	-	ENST00000254810.8@H3F3B	ENST00000254810.8	protein_coding	75779657,75779047,75778810,75776434	75779779,75779184,75778963,75778723	Gene ID= ENSG00000132475.10 TPM= 30.8 Transcript Type= protein_coding
chr17	75778574	75779780	75778574	75779780	-	ENST00000589599.5@H3F3B	ENST00000589599.5	protein_coding	75779647,75779047,75778810,75778574	75779780,75779184,75778963,75778723	Gene ID= ENSG00000132475.10 TPM= 18.06 Transcript Type= protein_coding
chr17	75784855	75794198	75784855	75794198	+	ENST00000586527.1@UNK	ENST00000586527.1	protein_coding	75784855,75791760,75792313,75793443	75784984,75792019,75792478,75794198	Gene ID= ENSG00000132478.9 TPM= 1.06 Transcript Type= nonsense_mediated_decay
chr17	75827225	75833326	75827225	75833326	-	transcript5034.chr17.nic@UNC13D	transcript5034.chr17.nic	protein_coding	75833193,75832966,75831243,75831098,75830578,75830362,75830028,75828787,75827225	75833326,75833045,75831348,75831169,75830661,75830482,75830151,75828983,75828086	Gene ID= ENSG00000092929.11 TPM= 2.12 Transcript Type= NA
chr17	75845699	75855420	75845699	75855420	-	ENST00000254806.7@WBP2	ENST00000254806.7	protein_coding	75855239,75851568,75849604,75848570,75847796,75847487,75846908,75845699	75855420,75851676,75849739,75848662,75847930,75847609,75846984,75846787	Gene ID= ENSG00000132471.11 TPM= 509.84 Transcript Type= protein_coding
chr17	75874164	75878585	75874164	75878585	-	transcript5060.chr17.nic@TRIM47	transcript5060.chr17.nic	protein_coding	75876718,75876262,75875901,75874164	75878585,75876492,75876099,75875474	Gene ID= ENSG00000132481.6 TPM= 3.54 Transcript Type= NA
chr17	75874164	75875769	75874164	75875769	-	transcript5061.chr17.nnic@TRIM47	transcript5061.chr17.nnic	protein_coding	75875624,75875400,75874164	75875769,75875474,75875123	Gene ID= ENSG00000132481.6 TPM= 13.81 Transcript Type= NA
chr17	75874161	75878575	75874161	75878575	-	ENST00000254816.5@TRIM47	ENST00000254816.5	protein_coding	75877874,75876718,75876262,75875901,75875400,75874161	75878575,75876813,75876492,75876099,75875474,75875123	Gene ID= ENSG00000132481.6 TPM= 82.93 Transcript Type= protein_coding
chr17	75888960	75897003	75888960	75897003	-	ENST00000269383.7@TRIM65	ENST00000269383.7	protein_coding	75896524,75892755,75892267,75892011,75891813,75888960	75897003,75892850,75892500,75892185,75891878,75891347	Gene ID= ENSG00000141569.10 TPM= 14.87 Transcript Type= protein_coding
chr17	75898643	75905413	75898643	75905413	-	ENST00000309352.3@MRPL38	ENST00000309352.3	protein_coding	75904809,75904540,75902020,75901712,75901201,75900982,75899516,75899158,75898643	75905413,75904719,75902154,75901920,75901273,75901027,75899674,75899294,75898986	Gene ID= ENSG00000204316.12 TPM= 208.71 Transcript Type= protein_coding
chr17	75942878	75979197	75942878	75979197	-	transcript5070.chr17.nic@ACOX1	transcript5070.chr17.nic	protein_coding	75978965,75978534,75960215,75957459,75955828,75955566,75953451,75951415,75950774,75949718,75949495,75949217,75948251,75946707,75942878	75979197,75978693,75960375,75957566,75955947,75955681,75953620,75951577,75950964,75949897,75949600,75949360,75948457,75946795,75943213	Gene ID= ENSG00000161533.11 TPM= 5.31 Transcript Type= NA
chr17	75941507	75979363	75941507	75979363	-	ENST00000293217.9@ACOX1	ENST00000293217.9	protein_coding	75978965,75978534,75960215,75957459,75955828,75955566,75953451,75951415,75950774,75949718,75949495,75949217,75948251,75941507	75979363,75978693,75960375,75957566,75955947,75955681,75953620,75951577,75950964,75949897,75949600,75949360,75948457,75946795	Gene ID= ENSG00000161533.11 TPM= 38.24 Transcript Type= protein_coding
chr17	75946577	75979134	75946577	75979134	-	ENST00000301608.8@ACOX1	ENST00000301608.8	protein_coding	75978965,75978534,75973625,75957459,75955828,75955566,75953451,75951415,75950774,75949718,75949495,75949217,75948251,75946577	75979134,75978693,75973785,75957566,75955947,75955681,75953620,75951577,75950964,75949897,75949600,75949360,75948457,75946795	Gene ID= ENSG00000161533.11 TPM= 2.12 Transcript Type= protein_coding
chr17	75979220	76000586	75979220	76000586	+	ENST00000397640.5@TEN1	ENST00000397640.5	protein_coding	75979220,75986187,75991466,76000141	75979511,75986284,75991623,76000586	Gene ID= ENSG00000257949.6 TPM= 8.5 Transcript Type= protein_coding
chr17	75979278	76005998	75979278	76005998	+	transcript5083.chr17.nic@TEN1-CDK3	transcript5083.chr17.nic	protein_coding	75979278,75986187,75991466,76000141,76002022,76002248,76002511,76003195,76005298	75979511,75986284,75991623,76001951,76002142,76002418,76002612,76003398,76005998	Gene ID= ENSG00000261408.6 TPM= 3.19 Transcript Type= NA
chr17	75979260	76005999	75979260	76005999	+	ENST00000569284.1@TEN1-CDK3	ENST00000569284.1	protein_coding	75979260,75986187,75991466,76000141,76001874,76002022,76002248,76002511,76003195,76005298	75979511,75986284,75991623,76001541,76001951,76002142,76002418,76002612,76003398,76005999	Gene ID= ENSG00000261408.6 TPM= 1.06 Transcript Type= protein_coding
chr17	76039103	76072653	76039103	76072653	-	ENST00000307877.6@SRP68	ENST00000307877.6	protein_coding	76072308,76070378,76067217,76063976,76061492,76061110,76060308,76057403,76050428,76047906,76046038,76045292,76043829,76040903,76040419,76039103	76072653,76070444,76067330,76064171,76061574,76061219,76060390,76057543,76050526,76047970,76046194,76045386,76043958,76040978,76040474,76039933	Gene ID= ENSG00000167881.14 TPM= 124.27 Transcript Type= protein_coding
chr17	76081018	76103758	76081018	76103758	-	ENST00000589210.5@EXOC7	ENST00000589210.5	protein_coding	76103633,76103361,76101679,76101271,76097796,76094414,76091143,76089175,76088771,76088464,76088060,76087654,76086080,76085677,76085314,76084517,76084248,76084006,76081018	76103758,76103426,76101863,76101376,76098018,76094581,76091235,76089320,76088923,76088562,76088122,76087720,76086145,76085797,76085409,76084580,76084289,76084139,76083750	Gene ID= ENSG00000182473.21 TPM= 73.02 Transcript Type= protein_coding
chr17	76081017	76103695	76081017	76103695	-	ENST00000332065.9@EXOC7	ENST00000332065.9	protein_coding	76103633,76103361,76101679,76101271,76097796,76094414,76089175,76088771,76088464,76088060,76087654,76086080,76085677,76085314,76084517,76084248,76084006,76081017	76103695,76103426,76101863,76101376,76098018,76094581,76089320,76088923,76088562,76088122,76087720,76086145,76085797,76085409,76084580,76084289,76084139,76083750	Gene ID= ENSG00000182473.21 TPM= 66.65 Transcript Type= protein_coding
chr17	76092315	76103743	76092315	76103743	-	ENST00000405068.3@EXOC7	ENST00000405068.3	protein_coding	76103633,76103361,76101679,76101271,76097796,76092315	76103743,76103426,76101863,76101376,76098018,76094581	Gene ID= ENSG00000182473.21 TPM= 11.68 Transcript Type= retained_intron
chr17	76142453	76240373	76142453	76240373	-	ENST00000269391.10@RNF157	ENST00000269391.10	protein_coding	76240153,76212364,76173702,76167651,76167009,76166461,76165502,76164748,76162552,76161843,76161535,76159335,76158393,76156210,76155562,76155252,76154283,76152355,76142453	76240373,76212482,76173790,76167797,76167126,76166527,76165545,76164795,76162623,76162002,76161647,76159573,76158501,76156321,76155734,76155317,76154328,76152465,76145353	Gene ID= ENSG00000141576.14 TPM= 1.06 Transcript Type= protein_coding
chr17	76265202	76271299	76265202	76271299	+	ENST00000327490.7@UBALD2	ENST00000327490.7	protein_coding	76265202,76265907,76270194	76265625,76265969,76271299	Gene ID= ENSG00000185262.8 TPM= 16.99 Transcript Type= protein_coding
chr17	76309486	76354149	76309486	76354149	-	ENST00000446526.7@PRPSAP1	ENST00000446526.7	protein_coding	76353534,76348529,76344671,76332263,76330551,76330043,76328717,76313821,76312870,76309486	76354149,76348581,76344737,76332435,76330666,76330098,76328862,76313891,76313016,76311700	Gene ID= ENSG00000161542.16 TPM= 3.19 Transcript Type= protein_coding
chr17	76310934	76353931	76310934	76353931	-	transcript5137.chr17.nic@PRPSAP1	transcript5137.chr17.nic	protein_coding	76353534,76348529,76344671,76332263,76330551,76330043,76328717,76312870,76310934	76353931,76348581,76344737,76332435,76330666,76330098,76328862,76313891,76311700	Gene ID= ENSG00000161542.16 TPM= 2.12 Transcript Type= NA
chr17	76383181	76387855	76383181	76387855	+	transcript5141.chr17.nic@SPHK1	transcript5141.chr17.nic	protein_coding	76383181,76385451,76385985,76386221,76386393,76386806	76383529,76385654,76386137,76386315,76386508,76387855	Gene ID= ENSG00000176170.13 TPM= 2.73 Transcript Type= NA
chr17	76384587	76387855	76384587	76387855	+	transcript5146.chr17.nic@SPHK1	transcript5146.chr17.nic	protein_coding	76384587,76385451,76386221,76386393,76386806	76384806,76386137,76386315,76386508,76387855	Gene ID= ENSG00000176170.13 TPM= 4.32 Transcript Type= NA
chr17	76384305	76387855	76384305	76387855	+	transcript5148.chr17.nic@SPHK1	transcript5148.chr17.nic	protein_coding	76384305,76386221,76386393,76386806	76386137,76386315,76386508,76387855	Gene ID= ENSG00000176170.13 TPM= 7.08 Transcript Type= NA
chr17	76384609	76387860	76384609	76387860	+	ENST00000592299.5@SPHK1	ENST00000592299.5	protein_coding	76384609,76385451,76385985,76386221,76386393,76386806	76384806,76385654,76386137,76386315,76386508,76387860	Gene ID= ENSG00000176170.13 TPM= 12.29 Transcript Type= protein_coding
chr17	76384650	76387855	76384650	76387855	+	ENST00000323374.8@SPHK1	ENST00000323374.8	protein_coding	76384650,76385451,76385985,76386221,76386393,76386806	76385169,76385654,76386137,76386315,76386508,76387855	Gene ID= ENSG00000176170.13 TPM= 3.79 Transcript Type= protein_coding
chr17	76385292	76387857	76385292	76387857	+	ENST00000392496.3@SPHK1	ENST00000392496.3	protein_coding	76385292,76385985,76386221,76386393,76386806	76385654,76386137,76386315,76386508,76387857	Gene ID= ENSG00000176170.13 TPM= 2.73 Transcript Type= protein_coding
chr17	76389451	76453206	76389451	76453206	-	ENST00000319380.11@UBE2O	ENST00000319380.11	protein_coding	76452725,76405513,76405206,76402602,76402064,76401011,76400441,76400147,76399449,76398837,76398472,76398255,76397799,76396128,76395725,76391910,76391756,76389451	76453206,76405572,76405316,76402699,76402127,76401154,76400550,76400297,76399921,76398991,76398584,76398383,76397888,76396821,76395861,76392113,76391813,76391613	Gene ID= ENSG00000175931.12 TPM= 26.02 Transcript Type= protein_coding
chr17	76389459	76453190	76389459	76453190	-	transcript5152.chr17.nnic@UBE2O	transcript5152.chr17.nnic	protein_coding	76452725,76405513,76405206,76402602,76402064,76401011,76400441,76400147,76399449,76398837,76398472,76398255,76397799,76396128,76395725,76391912,76389459	76453190,76405572,76405316,76402699,76402127,76401154,76400550,76400297,76399921,76398991,76398584,76398383,76397888,76396821,76395861,76392113,76391615	Gene ID= ENSG00000175931.12 TPM= 6.9 Transcript Type= NA
chr17	76417415	76419306	76417415	76419306	+	transcript5154.chr17.nnic@NA	transcript5154.chr17.nnic	NA	76417415	76419306	Gene ID= novel_gene_chr17_5155 TPM= 3.19 Transcript Type= NA
chr17	76470896	76501407	76470896	76501407	-	ENST00000313080.8@RHBDF2	ENST00000313080.8	protein_coding	76501353,76487712,76481375,76479733,76479082,76478806,76477657,76477180,76476830,76475030,76474730,76474373,76474033,76473839,76473648,76473252,76473005,76472686,76470896	76501407,76487909,76481545,76479941,76479277,76479009,76477785,76477298,76477024,76475141,76474804,76474534,76474142,76473902,76473742,76473327,76473105,76472839,76472052	Gene ID= ENSG00000129667.12 TPM= 10.62 Transcript Type= protein_coding
chr17	76527356	76537905	76527356	76537905	-	ENST00000293230.9@CYGB	ENST00000293230.9	protein_coding	76537400,76531460,76530979,76527356	76537905,76531691,76531142,76528611	Gene ID= ENSG00000161544.9 TPM= 19.12 Transcript Type= protein_coding
chr17	76557736	76565345	76557736	76565345	+	transcript5168.chr17.nnic@SNHG16	transcript5168.chr17.nnic	processed_transcript	76557736,76561288,76563119,76563778	76557857,76561398,76563752,76565345	Gene ID= ENSG00000163597.14 TPM= 30.66 Transcript Type= NA
chr17	76557758	76565343	76557758	76565343	+	transcript5171.chr17.nic@SNHG16	transcript5171.chr17.nic	processed_transcript	76557758,76558945,76561288,76563119	76557857,76559043,76561398,76565343	Gene ID= ENSG00000163597.14 TPM= 37.21 Transcript Type= NA
chr17	76557770	76565343	76557770	76565343	+	ENST00000493536.5@SNHG16	ENST00000493536.5	processed_transcript	76557770,76561288,76563119	76557857,76561398,76565343	Gene ID= ENSG00000163597.14 TPM= 59.51 Transcript Type= lincRNA
chr17	76565379	76586147	76565379	76586147	-	transcript5163.chr17.nnic@ST6GALNAC2	transcript5163.chr17.nnic	protein_coding	76585684,76578756,76574365,76573195,76572637,76570565,76568713,76567453,76565379	76586147,76578816,76574539,76573363,76572802,76570668,76568796,76567552,76566271	Gene ID= ENSG00000070731.10 TPM= 4.25 Transcript Type= NA
chr17	76565379	76586131	76565379	76586131	-	transcript5165.chr17.nic@ST6GALNAC2	transcript5165.chr17.nic	protein_coding	76585684,76574365,76573195,76572637,76570565,76568713,76567453,76565379	76586131,76574539,76573363,76572775,76570668,76568796,76567552,76566271	Gene ID= ENSG00000070731.10 TPM= 3.19 Transcript Type= NA
chr17	76565379	76586128	76565379	76586128	-	ENST00000225276.9@ST6GALNAC2	ENST00000225276.9	protein_coding	76585684,76578756,76574365,76573195,76572637,76570565,76568713,76567453,76565379	76586128,76578816,76574539,76573363,76572775,76570668,76568796,76567552,76566271	Gene ID= ENSG00000070731.10 TPM= 16.99 Transcript Type= protein_coding
chr17	76671942	76673658	76671942	76673658	+	ENST00000565271.1@AC005837.1	ENST00000565271.1	antisense_RNA	76671942	76673658	Gene ID= ENSG00000261335.1 TPM= 1.06 Transcript Type= antisense_RNA
chr17	76679569	76711016	76679569	76711016	-	ENST00000449428.6@MXRA7	ENST00000449428.6	protein_coding	76710605,76688113,76685072,76679569	76711016,76688176,76685165,76680879	Gene ID= ENSG00000182534.13 TPM= 1716.05 Transcript Type= protein_coding
chr17	76679569	76711004	76679569	76711004	-	ENST00000375036.6@MXRA7	ENST00000375036.6	protein_coding	76710605,76688113,76685072,76683847,76679569	76711004,76688176,76685165,76683927,76680879	Gene ID= ENSG00000182534.13 TPM= 611.05 Transcript Type= protein_coding
chr17	76712832	76726679	76712832	76726679	-	ENST00000445478.6@JMJD6	ENST00000445478.6	protein_coding	76726347,76725467,76723772,76721798,76720360,76718733,76712832	76726679,76725855,76724058,76721933,76720498,76718860,76716722	Gene ID= ENSG00000070495.14 TPM= 31.86 Transcript Type= protein_coding
chr17	76718446	76726784	76718446	76726784	-	ENST00000542934.5@JMJD6	ENST00000542934.5	protein_coding	76726347,76725467,76723772,76721798,76721263,76720360,76718446	76726784,76725855,76724058,76721933,76721356,76720498,76718860	Gene ID= ENSG00000070495.14 TPM= 2.66 Transcript Type= nonsense_mediated_decay
chr17	76718453	76726590	76718453	76726590	-	ENST00000397625.8@JMJD6	ENST00000397625.8	protein_coding	76726347,76725467,76723772,76721798,76720360,76718453	76726590,76725855,76724058,76721933,76720498,76718860	Gene ID= ENSG00000070495.14 TPM= 56.83 Transcript Type= protein_coding
chr17	76726843	76733936	76726843	76733936	+	ENST00000588783.5@METTL23	ENST00000588783.5	protein_coding	76726843,76729690,76732978,76733293,76733521	76727178,76729794,76733215,76733381,76733936	Gene ID= ENSG00000181038.13 TPM= 3.19 Transcript Type= protein_coding
chr17	76726824	76733879	76726824	76733879	+	transcript5267.chr17.nnic@METTL23	transcript5267.chr17.nnic	protein_coding	76726824,76732978,76733293,76733521	76727534,76733215,76733377,76733879	Gene ID= ENSG00000181038.13 TPM= 3.19 Transcript Type= NA
chr17	76726854	76733878	76726854	76733878	+	ENST00000590964.5@METTL23	ENST00000590964.5	protein_coding	76726854,76732978,76733293,76733521	76727178,76733215,76733377,76733878	Gene ID= ENSG00000181038.13 TPM= 1.06 Transcript Type= protein_coding
chr17	76734147	76737331	76734147	76737331	-	transcript5272.chr17.nic@SRSF2	transcript5272.chr17.nic	protein_coding	76736799,76736154,76735772,76734147	76737331,76736464,76735875,76735158	Gene ID= ENSG00000161547.16 TPM= 3.54 Transcript Type= NA
chr17	76734123	76737335	76734123	76737335	-	transcript5280.chr17.nic@SRSF2	transcript5280.chr17.nic	protein_coding	76736799,76735061,76734123	76737335,76736464,76734562	Gene ID= ENSG00000161547.16 TPM= 5.31 Transcript Type= NA
chr17	76734115	76737333	76734115	76737333	-	ENST00000392485.2@SRSF2	ENST00000392485.2	protein_coding	76736799,76734115	76737333,76736464	Gene ID= ENSG00000161547.16 TPM= 16.81 Transcript Type= protein_coding
chr17	76734119	76737374	76734119	76737374	-	ENST00000359995.9@SRSF2	ENST00000359995.9	protein_coding	76736799,76736154,76734119	76737374,76736464,76735158	Gene ID= ENSG00000161547.16 TPM= 42.31 Transcript Type= protein_coding
chr17	76736853	76738488	76736853	76738488	+	ENST00000591864.1@MFSD11	ENST00000591864.1	protein_coding	76736853,76738282	76737091,76738488	Gene ID= ENSG00000092931.11 TPM= 1.06 Transcript Type= protein_coding
chr17	76738071	76778727	76738071	76778727	+	ENST00000590514.5@MFSD11	ENST00000590514.5	protein_coding	76738071,76738282,76738938,76740957,76741969,76742177,76743398,76744322,76754047,76767386,76769746,76774997,76776406,76778188	76738165,76738448,76738993,76741064,76742048,76742273,76743456,76744466,76754087,76767451,76769871,76775171,76776541,76778727	Gene ID= ENSG00000092931.11 TPM= 6.37 Transcript Type= protein_coding
chr17	77088673	77094990	77088673	77094990	+	ENST00000434411.5@SNHG20	ENST00000434411.5	processed_transcript	77088673,77089153,77093244	77088949,77089271,77094990	Gene ID= ENSG00000234912.11 TPM= 3.19 Transcript Type= sense_overlapping
chr17	77140972	77217101	77140972	77217101	+	transcript5289.chr17.nnic@SEC14L1	transcript5289.chr17.nnic	protein_coding	77140972,77142646,77143567,77190803,77191181,77193421,77194677,77196202,77200484,77203570,77205276,77206229,77206728,77209342,77211950,77213314,77213918,77216167,77216414	77141107,77142750,77143659,77190952,77191312,77193549,77194911,77196311,77200673,77203658,77205346,77206400,77206862,77209476,77212201,77213492,77216127,77216387,77217101	Gene ID= ENSG00000129657.14 TPM= 7.44 Transcript Type= NA
chr17	77140932	77214329	77140932	77214329	+	ENST00000585618.5@SEC14L1	ENST00000585618.5	protein_coding	77140932,77142646,77143567,77190803,77191181,77193421,77194677,77196202,77200484,77203570,77205276,77206229,77206728,77209342,77211950,77213314,77213918	77141054,77142750,77143659,77190952,77191312,77193549,77194911,77196311,77200673,77203658,77205346,77206400,77206862,77209476,77212201,77213492,77214329	Gene ID= ENSG00000129657.14 TPM= 5.31 Transcript Type= protein_coding
chr17	77214651	77217101	77214651	77217101	+	transcript5298.chr17.nnic@SEC14L1	transcript5298.chr17.nnic	protein_coding	77214651,77216115,77216414	77216075,77216387,77217101	Gene ID= ENSG00000129657.14 TPM= 2.12 Transcript Type= NA
chr17	77213831	77217096	77213831	77217096	+	transcript5300.chr17.nnic@SEC14L1	transcript5300.chr17.nnic	protein_coding	77213831,77216089	77216062,77217096	Gene ID= ENSG00000129657.14 TPM= 3.19 Transcript Type= NA
chr17	77204523	77207232	77204523	77207232	+	transcript5302.chr17.nic@SEC14L1	transcript5302.chr17.nic	protein_coding	77204523,77206229	77205346,77207232	Gene ID= ENSG00000129657.14 TPM= 3.19 Transcript Type= NA
chr17	77141032	77217101	77141032	77217101	+	ENST00000443798.8@SEC14L1	ENST00000443798.8	protein_coding	77141032,77142646,77143567,77190803,77191181,77193421,77194677,77196202,77200484,77203570,77205276,77206229,77206728,77209342,77211950,77213314,77213918,77216549	77141107,77142750,77143659,77190952,77191312,77193549,77194911,77196311,77200673,77203658,77205346,77206400,77206862,77209476,77212201,77213492,77214019,77217101	Gene ID= ENSG00000129657.14 TPM= 4.25 Transcript Type= protein_coding
chr17	77373190	77500594	77373190	77500594	+	ENST00000423034.6@SEPT9	ENST00000423034.6	protein_coding	77373190,77402059,77482144,77487424,77488240,77488727,77490742,77492621,77492980,77497315,77498523	77373552,77402703,77482335,77487552,77488321,77488864,77490859,77492716,77493076,77497366,77500594	Gene ID= ENSG00000184640.17 TPM= 63.73 Transcript Type= protein_coding
chr17	77425213	77431002	77425213	77431002	+	transcript5307.chr17.nnic@NA	transcript5307.chr17.nnic	NA	77425213	77431002	Gene ID= novel_gene_chr17_5308 TPM= 2.12 Transcript Type= NA
chr17	77958650	78004232	77958650	78004232	+	transcript5353.chr17.nic@TNRC6C	transcript5353.chr17.nic	protein_coding	77958650,78004170	77959268,78004232	Gene ID= ENSG00000078687.17 TPM= 4.25 Transcript Type= NA
chr17	77959240	78106037	77959240	78106037	+	ENST00000636222.1@TNRC6C	ENST00000636222.1	protein_coding	77959240,78004170,78005058,78031516,78048845,78064722,78067757,78071085,78073037,78075136,78077161,78079395,78083047,78086503,78086853,78091440,78092933,78093620,78097745,78098343,78102474,78103414,78104485	77959268,78004269,78005079,78031842,78051448,78064937,78067923,78071165,78073094,78075278,78077334,78079541,78083166,78086586,78087093,78091607,78093124,78093763,78097861,78098537,78102544,78103553,78106037	Gene ID= ENSG00000078687.17 TPM= 8.5 Transcript Type= protein_coding
chr17	78107398	78110335	78107398	78110335	-	ENST00000592939.1@TNRC6C-AS1	ENST00000592939.1	processed_transcript	78107398	78110335	Gene ID= ENSG00000204282.4 TPM= 6.37 Transcript Type= retained_intron
chr17	78108990	78112118	78108990	78112118	-	transcript5360.chr17.nnic@NA	transcript5360.chr17.nnic	NA	78108990	78112118	Gene ID= novel_gene_chr17_5361 TPM= 3.19 Transcript Type= NA
chr17	78112922	78128808	78112922	78128808	-	transcript5312.chr17.nic@TMC6	transcript5312.chr17.nic	protein_coding	78128659,78126777,78126524,78126277,78125726,78125158,78124889,78124524,78123989,78122605,78121556,78121013,78120653,78119297,78118971,78117802,78117468,78117269,78113548,78112922	78128808,78126906,78126648,78126366,78125884,78125263,78124985,78124781,78124179,78122749,78121711,78121164,78120832,78119392,78119046,78117935,78117644,78117347,78113624,78113211	Gene ID= ENSG00000141524.15 TPM= 25.35 Transcript Type= NA
chr17	78112922	78128808	78112922	78128808	-	transcript5323.chr17.nic@TMC6	transcript5323.chr17.nic	protein_coding	78128659,78126777,78126524,78126277,78125726,78125158,78124889,78124524,78123989,78122605,78121556,78121013,78119297,78118971,78117802,78117468,78117269,78113548,78112922	78128808,78126906,78126648,78126366,78125884,78125263,78124985,78124781,78124179,78122749,78121711,78121164,78119392,78119046,78117935,78117644,78117347,78113624,78113211	Gene ID= ENSG00000141524.15 TPM= 7.62 Transcript Type= NA
chr17	78112919	78123123	78112919	78123123	-	ENST00000592076.5@TMC6	ENST00000592076.5	protein_coding	78122946,78122605,78113548,78112919	78123123,78122749,78113624,78113211	Gene ID= ENSG00000141524.15 TPM= 1.06 Transcript Type= processed_transcript
chr17	78168558	78173527	78168558	78173527	+	ENST00000225777.7@SYNGR2	ENST00000225777.7	protein_coding	78168558,78170817,78171510,78171739	78168715,78171054,78171649,78173527	Gene ID= ENSG00000108639.7 TPM= 10.62 Transcript Type= protein_coding
chr17	78168611	78172719	78168611	78172719	+	ENST00000588282.5@SYNGR2	ENST00000588282.5	protein_coding	78168611,78170817,78171510	78168715,78171054,78172719	Gene ID= ENSG00000108639.7 TPM= 4.25 Transcript Type= protein_coding
chr17	78174075	78187233	78174075	78187233	-	ENST00000301634.11@TK1	ENST00000301634.11	protein_coding	78186929,78186787,78185055,78182589,78175529,78175050,78174075	78187233,78186818,78185165,78182682,78175618,78175169,78174950	Gene ID= ENSG00000167900.11 TPM= 1.06 Transcript Type= protein_coding
chr17	78187357	78207701	78187357	78207701	+	transcript5363.chr17.nic@AFMID	transcript5363.chr17.nic	protein_coding	78187357,78190970,78202499,78202703,78205946,78206911	78187433,78191060,78202603,78202751,78206050,78207701	Gene ID= ENSG00000183077.15 TPM= 6.37 Transcript Type= NA
chr17	78356778	78360077	78356778	78360077	-	ENST00000330871.3@SOCS3	ENST00000330871.3	protein_coding	78359750,78356778	78360077,78359183	Gene ID= ENSG00000184557.4 TPM= 443.98 Transcript Type= protein_coding
chr17	78378640	78424554	78378640	78424554	+	ENST00000262764.10@PGS1	ENST00000262764.10	protein_coding	78378640,78392476,78396308,78398252,78399348,78400677,78403568,78414879,78419546,78424061	78378808,78392665,78396385,78398351,78399537,78400855,78404089,78415027,78419675,78424554	Gene ID= ENSG00000087157.18 TPM= 23.37 Transcript Type= protein_coding
chr17	78378640	78424557	78378640	78424557	+	transcript5375.chr17.nic@PGS1	transcript5375.chr17.nic	protein_coding	78378640,78392476,78396308,78398252,78399348,78400677,78403568,78414879,78419546,78424061	78378808,78392665,78396385,78398351,78399537,78400855,78404089,78415027,78419725,78424557	Gene ID= ENSG00000087157.18 TPM= 2.12 Transcript Type= NA
chr17	78378640	78424656	78378640	78424656	+	transcript5378.chr17.nic@PGS1	transcript5378.chr17.nic	protein_coding	78378640,78392476,78396308,78398252,78399348,78400677,78403568,78414952,78419546,78424061	78378808,78392665,78396385,78398351,78399537,78400855,78404089,78415027,78419675,78424656	Gene ID= ENSG00000087157.18 TPM= 4.25 Transcript Type= NA
chr17	78378640	78424554	78378640	78424554	+	transcript5383.chr17.nic@PGS1	transcript5383.chr17.nic	protein_coding	78378640,78392476,78396308,78398252,78399348,78400677,78403568,78419546,78424061	78378808,78392665,78396385,78398351,78399537,78400855,78404089,78419675,78424554	Gene ID= ENSG00000087157.18 TPM= 3.19 Transcript Type= NA
chr17	78378640	78424656	78378640	78424656	+	transcript5388.chr17.nic@PGS1	transcript5388.chr17.nic	protein_coding	78378640,78392476,78398252,78399348,78400677,78403568,78414879,78419546,78424061	78378808,78392665,78398351,78399537,78400855,78404089,78415027,78419675,78424656	Gene ID= ENSG00000087157.18 TPM= 2.12 Transcript Type= NA
chr17	78421843	78424658	78421843	78424658	+	transcript5392.chr17.nnic@NA	transcript5392.chr17.nnic	NA	78421843	78424658	Gene ID= novel_gene_chr17_5393 TPM= 4.25 Transcript Type= NA
chr17	78674048	78782328	78674048	78782328	-	transcript5396.chr17.nic@CYTH1	transcript5396.chr17.nic	protein_coding	78782202,78709650,78708197,78702538,78702122,78701671,78700331,78698820,78698269,78692417,78680971,78680190,78676995,78674048	78782328,78709732,78708261,78702604,78702240,78701751,78700443,78698968,78698380,78692493,78681042,78680344,78677050,78676169	Gene ID= ENSG00000108669.16 TPM= 6.02 Transcript Type= NA
chr17	78674049	78678471	78674049	78678471	-	ENST00000586299.1@CYTH1	ENST00000586299.1	protein_coding	78674049	78678471	Gene ID= ENSG00000108669.16 TPM= 10.27 Transcript Type= retained_intron
chr17	78674048	78782272	78674048	78782272	-	ENST00000591455.5@CYTH1	ENST00000591455.5	protein_coding	78782202,78709650,78708197,78702538,78702122,78701671,78700331,78698820,78698269,78692417,78680971,78680190,78674048	78782272,78709732,78708261,78702604,78702240,78701751,78700443,78698968,78698380,78692493,78681042,78680344,78676169	Gene ID= ENSG00000108669.16 TPM= 10.27 Transcript Type= protein_coding
chr17	78802461	78840864	78802461	78840864	-	ENST00000588086.5@USP36	ENST00000588086.5	protein_coding	78840736,78838587,78836111,78835280,78828897,78827245,78821937,78820991,78819930,78818667,78814412,78813773,78812860,78806959,78806156,78803385,78802461	78840864,78838750,78836372,78835501,78829007,78827347,78822004,78821061,78820012,78818778,78814552,78813873,78813001,78807636,78806286,78803978,78802535	Gene ID= ENSG00000055483.19 TPM= 6.37 Transcript Type= non_stop_decay
chr17	78853235	78854893	78853235	78854893	-	transcript5403.chr17.nnic@NA	transcript5403.chr17.nnic	NA	78853235	78854893	Gene ID= novel_gene_chr17_5404 TPM= 3.19 Transcript Type= NA
chr17	78852977	78925387	78852977	78925387	-	ENST00000262768.11@TIMP2	ENST00000262768.11	protein_coding	78924959,78873819,78870898,78857522,78852977	78925387,78873919,78871006,78857646,78855864	Gene ID= ENSG00000035862.12 TPM= 18.06 Transcript Type= protein_coding
chr17	78971238	78980109	78971238	78980109	-	ENST00000262776.7@LGALS3BP	ENST00000262776.7	protein_coding	78979824,78977140,78975965,78974688,78972970,78971238	78980109,78977214,78976156,78974819,78973222,78972704	Gene ID= ENSG00000108679.12 TPM= 575.69 Transcript Type= protein_coding
chr17	78991717	79009817	78991717	79009817	-	ENST00000302345.6@CANT1	ENST00000302345.6	protein_coding	79009664,78996992,78995018,78991717	79009817,78997963,78995221,78993920	Gene ID= ENSG00000171302.16 TPM= 16.46 Transcript Type= protein_coding
chr17	78993390	78994943	78993390	78994943	+	transcript5417.chr17.nnic@NA	transcript5417.chr17.nnic	NA	78993390	78994943	Gene ID= novel_gene_chr17_5418 TPM= 2.12 Transcript Type= NA
chr17	78995637	78998345	78995637	78998345	+	transcript5419.chr17.nnic@NA	transcript5419.chr17.nnic	NA	78995637	78998345	Gene ID= novel_gene_chr17_5420 TPM= 3.72 Transcript Type= NA
chr17	79024294	79049788	79024294	79049788	+	transcript5421.chr17.nnic@C1QTNF1	transcript5421.chr17.nnic	protein_coding	79024294,79024862,79025824,79043955,79046555,79047538	79024494,79025245,79025935,79044123,79046694,79049788	Gene ID= ENSG00000173918.14 TPM= 38.77 Transcript Type= NA
chr17	79025663	79049788	79025663	79049788	+	ENST00000392445.6@C1QTNF1	ENST00000392445.6	protein_coding	79025663,79043955,79046555,79047538	79025935,79044123,79046694,79049788	Gene ID= ENSG00000173918.14 TPM= 37.71 Transcript Type= protein_coding
chr17	79074903	79086696	79074903	79086696	+	transcript5435.chr17.nic@ENGASE	transcript5435.chr17.nic	protein_coding	79074903,79077430,79077663,79079489,79080207,79080925,79081898,79083020,79083482,79083761,79084538,79085234,79085620,79085933	79075090,79077497,79077864,79079637,79080364,79081073,79082877,79083123,79083590,79083951,79084686,79085342,79085734,79086696	Gene ID= ENSG00000167280.16 TPM= 6.37 Transcript Type= NA
chr17	79074945	79086696	79074945	79086696	+	ENST00000579016.5@ENGASE	ENST00000579016.5	protein_coding	79074945,79077430,79077663,79079489,79080207,79080925,79081898,79083020,79083482,79083761,79084538,79085234,79085620,79085933	79075090,79077497,79077864,79079637,79080364,79081073,79082063,79083123,79083590,79083951,79084686,79085342,79085734,79086696	Gene ID= ENSG00000167280.16 TPM= 3.19 Transcript Type= protein_coding
chr17	79089535	79091970	79089535	79091970	+	transcript5440.chr17.nnic@NA	transcript5440.chr17.nnic	NA	79089535	79091970	Gene ID= novel_gene_chr17_5441 TPM= 5.31 Transcript Type= NA
chr17	79778132	79787983	79778132	79787983	+	ENST00000310942.8@CBX2	ENST00000310942.8	protein_coding	79778132,79778384,79779362,79781696,79783732	79778307,79778427,79779427,79781801,79787983	Gene ID= ENSG00000173894.10 TPM= 1.06 Transcript Type= protein_coding
chr17	79778163	79779739	79778163	79779739	+	ENST00000571484.1@CBX2	ENST00000571484.1	protein_coding	79778163,79778384,79779362	79778307,79778427,79779739	Gene ID= ENSG00000173894.10 TPM= 3.19 Transcript Type= retained_intron
chr17	79792132	79797116	79792132	79797116	-	ENST00000269385.8@CBX8	ENST00000269385.8	protein_coding	79796930,79796497,79796250,79796057,79792132	79797116,79796540,79796315,79796123,79795558	Gene ID= ENSG00000141570.10 TPM= 8.5 Transcript Type= protein_coding
chr17	79833156	79839429	79833156	79839429	-	ENST00000269397.8@CBX4	ENST00000269397.8	protein_coding	79839183,79839011,79837837,79835646,79833156	79839429,79839054,79837902,79835712,79835395	Gene ID= ENSG00000141582.14 TPM= 37.18 Transcript Type= protein_coding
chr17	79935629	79938946	79935629	79938946	-	transcript5452.chr17.nnic@NA	transcript5452.chr17.nnic	NA	79935629	79938946	Gene ID= novel_gene_chr17_5453 TPM= 22.31 Transcript Type= NA
chr17	79940023	80035877	79940023	80035877	-	transcript5454.chr17.nnic@TBC1D16	transcript5454.chr17.nnic	protein_coding	80035795,80013367,80010160,79952657,79951450,79950411,79949717,79948872,79947645,79944908,79942060,79940859,79940023	80035877,80013609,80010757,79952818,79951597,79950578,79949865,79949006,79947831,79945087,79942206,79941107,79940694	Gene ID= ENSG00000167291.15 TPM= 2.12 Transcript Type= NA
chr17	80101531	80119877	80101531	80119877	+	transcript5467.chr17.nic@GAA	transcript5467.chr17.nic	protein_coding	80101531,80104555,80105749,80107557,80107800,80108290,80108489,80108697,80109945,80110727,80110941,80111983,80112578,80112876,80113218,80116968,80117600,80118193,80118653,80119272	80101625,80105132,80105894,80107722,80107896,80108409,80108607,80108828,80110055,80110840,80111025,80112100,80112711,80113027,80113366,80117109,80117749,80118357,80118805,80119877	Gene ID= ENSG00000171298.12 TPM= 91.35 Transcript Type= NA
chr17	80101594	80119877	80101594	80119877	+	ENST00000390015.7@GAA	ENST00000390015.7	protein_coding	80101594,80101811,80104555,80105749,80107557,80107800,80108290,80108489,80108697,80109945,80110727,80110941,80111983,80112578,80112876,80113218,80116968,80117600,80118193,80118653,80119272	80101625,80101890,80105132,80105894,80107722,80107896,80108409,80108607,80108828,80110055,80110840,80111025,80112100,80112711,80113027,80113366,80117109,80117749,80118357,80118805,80119877	Gene ID= ENSG00000171298.12 TPM= 92.41 Transcript Type= protein_coding
chr17	80101597	80102733	80101597	80102733	+	ENST00000574376.1@GAA	ENST00000574376.1	protein_coding	80101597,80101811	80101625,80102733	Gene ID= ENSG00000171298.12 TPM= 1.06 Transcript Type= processed_transcript
chr17	80112780	80114017	80112780	80114017	+	transcript5473.chr17.nnic@NA	transcript5473.chr17.nnic	NA	80112780	80114017	Gene ID= novel_gene_chr17_5474 TPM= 4.25 Transcript Type= NA
chr17	80135214	80147183	80135214	80147183	-	ENST00000269349.7@EIF4A3	ENST00000269349.7	protein_coding	80146793,80144172,80141782,80141319,80140008,80139670,80139021,80138142,80137386,80136228,80136004,80135214	80147183,80144244,80141848,80141381,80140140,80139750,80139162,80138280,80137501,80136335,80136131,80135506	Gene ID= ENSG00000141543.9 TPM= 61.61 Transcript Type= protein_coding
chr17	80209264	80220400	80209264	80220400	-	ENST00000326317.10@SGSH	ENST00000326317.10	protein_coding	80220226,80217032,80215033,80214615,80214172,80213804,80212071,80209264	80220400,80217192,80215138,80214765,80214328,80213885,80212274,80211011	Gene ID= ENSG00000181523.12 TPM= 20.18 Transcript Type= protein_coding
chr17	80220430	80253500	80220430	80253500	+	ENST00000361193.7@SLC26A11	ENST00000361193.7	protein_coding	80220430,80220916,80221548,80222655,80223252,80225837,80227818,80236928,80237522,80241771,80245196,80246154,80246509,80248130,80248575,80249154,80251329,80252625	80220496,80221115,80221794,80222847,80223337,80225916,80227960,80237103,80237594,80241821,80245256,80246209,80246649,80248257,80248674,80249287,80251401,80253500	Gene ID= ENSG00000181045.14 TPM= 8.5 Transcript Type= protein_coding
chr17	80260870	80321463	80260870	80321463	+	ENST00000319921.4@RNF213	ENST00000319921.4	protein_coding	80260870,80263574,80273241,80287815,80288633,80289659,80290570,80291628,80294720,80295557,80298321,80306252,80307128,80309018,80313012,80317188,80319190	80260902,80263778,80273404,80288363,80288755,80289837,80290728,80291827,80295003,80295813,80298518,80306468,80307201,80309171,80313167,80317277,80321463	Gene ID= ENSG00000173821.19 TPM= 7.44 Transcript Type= protein_coding
chr17	80415167	80438081	80415167	80438081	+	ENST00000520367.5@ENDOV	ENST00000520367.5	protein_coding	80415167,80415650,80422206,80423520,80425032,80425492,80428596,80429773,80436133	80415250,80415821,80422245,80423632,80425100,80425620,80428660,80429831,80438081	Gene ID= ENSG00000173818.16 TPM= 4.78 Transcript Type= protein_coding
chr17	80415452	80438086	80415452	80438086	+	ENST00000517795.5@ENDOV	ENST00000517795.5	protein_coding	80415452,80423520,80425032,80425492,80428596,80429773,80436133	80415610,80423632,80425100,80425620,80428660,80429831,80438086	Gene ID= ENSG00000173818.16 TPM= 1.59 Transcript Type= protein_coding
chr17	80415184	80430343	80415184	80430343	+	ENST00000323854.9@ENDOV	ENST00000323854.9	protein_coding	80415184,80415650,80422206,80423520,80425032,80425492,80428596,80429773	80415250,80415821,80422245,80423632,80425100,80425620,80428660,80430343	Gene ID= ENSG00000173818.16 TPM= 2.12 Transcript Type= protein_coding
chr17	80415167	80438081	80415167	80438081	+	ENST00000518137.5@ENDOV	ENST00000518137.5	protein_coding	80415167,80415650,80421828,80422206,80423520,80425032,80425492,80428596,80429773,80436133	80415250,80415821,80421962,80422245,80423632,80425100,80425620,80428660,80429831,80438081	Gene ID= ENSG00000173818.16 TPM= 1.59 Transcript Type= protein_coding
chr17	80415487	80438082	80415487	80438082	+	ENST00000518901.5@ENDOV	ENST00000518901.5	protein_coding	80415487,80422206,80423520,80425032,80425492,80428596,80429773,80436133	80415610,80422245,80423632,80425100,80425620,80428660,80429831,80438082	Gene ID= ENSG00000173818.16 TPM= 1.59 Transcript Type= protein_coding
chr17	80958406	80966371	80958406	80966371	+	transcript5529.chr17.nic@RPTOR	transcript5529.chr17.nic	protein_coding	80958406,80961394,80962461,80962928,80964262	80960205,80961480,80962577,80963057,80966371	Gene ID= ENSG00000141564.13 TPM= 21.24 Transcript Type= NA
chr17	80874207	80877481	80874207	80877481	-	transcript5532.chr17.nnic@NA	transcript5532.chr17.nnic	NA	80874207	80877481	Gene ID= novel_gene_chr17_5533 TPM= 2.12 Transcript Type= NA
chr17	80940650	80942418	80940650	80942418	+	transcript5530.chr17.nnic@NA	transcript5530.chr17.nnic	NA	80940650	80942418	Gene ID= novel_gene_chr17_5531 TPM= 3.19 Transcript Type= NA
chr17	80991841	81000133	80991841	81000133	+	ENST00000325167.9@CHMP6	ENST00000325167.9	protein_coding	80991841,80994581,80995019,80995672,80997007,80997261,80998366,80999098	80991981,80994690,80995106,80995758,80997072,80997341,80998420,81000133	Gene ID= ENSG00000176108.9 TPM= 106.22 Transcript Type= protein_coding
chr17	81029702	81034881	81029702	81034881	-	ENST00000573167.2@BAIAP2-AS1	ENST00000573167.2	lincRNA	81034565,81029702	81034881,81033398	Gene ID= ENSG00000226137.5 TPM= 3.19 Transcript Type= lincRNA
chr17	81035151	81109372	81035151	81109372	+	ENST00000572329.5@BAIAP2	ENST00000572329.5	protein_coding	81035151,81036863,81053668,81057881,81084832,81085654,81086443,81099928,81103502,81103907,81104514,81106078,81106745,81108475,81108968	81035308,81036961,81053743,81057967,81084893,81085715,81086580,81100080,81103723,81104108,81104715,81106146,81106907,81108509,81109372	Gene ID= ENSG00000175866.15 TPM= 1.06 Transcript Type= nonsense_mediated_decay
chr17	81035151	81116225	81035151	81116225	+	ENST00000428708.6@BAIAP2	ENST00000428708.6	protein_coding	81035151,81053668,81057881,81084832,81085654,81086443,81099928,81103502,81103907,81104514,81106078,81106745,81108475,81115770	81035308,81053743,81057967,81084893,81085725,81086580,81100080,81103723,81104108,81104715,81106146,81106907,81108509,81116225	Gene ID= ENSG00000175866.15 TPM= 9.56 Transcript Type= protein_coding
chr17	81055576	81057986	81055576	81057986	-	transcript5545.chr17.nnic@NA	transcript5545.chr17.nnic	NA	81055576	81057986	Gene ID= novel_gene_chr17_5546 TPM= 4.25 Transcript Type= NA
chr17	81117304	81122383	81117304	81122383	-	transcript5543.chr17.nic@AATK	transcript5543.chr17.nic	protein_coding	81120201,81119936,81119380,81117304	81122383,81120083,81119580,81118442	Gene ID= ENSG00000181409.11 TPM= 9.56 Transcript Type= NA
chr17	81228277	81239091	81228277	81239091	-	ENST00000300714.7@TEPSIN	ENST00000300714.7	protein_coding	81238986,81237387,81236980,81236708,81233981,81233638,81233432,81231847,81231578,81231398,81230544,81228277	81239091,81237459,81237071,81236801,81234048,81233716,81233503,81232021,81231691,81231476,81230678,81229476	Gene ID= ENSG00000167302.10 TPM= 5.31 Transcript Type= protein_coding
chr17	81239239	81241281	81239239	81241281	+	ENST00000431388.2@NDUFAF8	ENST00000431388.2	protein_coding	81239239,81239568,81240987	81239447,81239678,81241281	Gene ID= ENSG00000224877.3 TPM= 48.86 Transcript Type= protein_coding
chr17	81245000	81295329	81245000	81295329	-	transcript5564.chr17.nic@SLC38A10	transcript5564.chr17.nic	protein_coding	81294823,81289691,81284850,81283409,81282189,81280609,81277031,81275969,81272516,81270918,81260238,81253073,81252195,81251493,81250070,81246885,81245000	81295329,81289808,81284895,81283502,81282332,81280733,81277133,81276151,81272627,81271024,81260394,81253240,81252683,81251612,81250093,81247061,81246673	Gene ID= ENSG00000157637.12 TPM= 108.87 Transcript Type= NA
chr17	81245000	81295305	81245000	81295305	-	ENST00000374759.7@SLC38A10	ENST00000374759.7	protein_coding	81294823,81289691,81284850,81283409,81282189,81280609,81277031,81275969,81272516,81270918,81260238,81253073,81252195,81251493,81246885,81245000	81295305,81289808,81284895,81283502,81282332,81280733,81277133,81276151,81272627,81271024,81260394,81253240,81252683,81251612,81247061,81246673	Gene ID= ENSG00000157637.12 TPM= 81.26 Transcript Type= protein_coding
chr17	81249745	81251802	81249745	81251802	+	transcript5581.chr17.nnic@NA	transcript5581.chr17.nnic	NA	81249745	81251802	Gene ID= novel_gene_chr17_5582 TPM= 2.12 Transcript Type= NA
chr17	81302822	81306573	81302822	81306573	-	transcript5585.chr17.nnic@NA	transcript5585.chr17.nnic	NA	81302822	81306573	Gene ID= novel_gene_chr17_5586 TPM= 3.19 Transcript Type= NA
chr17	81345530	81345715	81345530	81345715	-	transcript5587.chr17.nnic@NA	transcript5587.chr17.nnic	NA	81345530	81345715	Gene ID= novel_gene_chr17_5588 TPM= 4.25 Transcript Type= NA
chr17	81395609	81397144	81395609	81397144	-	ENST00000624417.1@AC110285.7	ENST00000624417.1	TEC	81395609	81397144	Gene ID= ENSG00000279692.1 TPM= 1.06 Transcript Type= TEC
chr17	81509971	81512802	81509971	81512802	-	transcript5608.chr17.nnic@NA	transcript5608.chr17.nnic	NA	81509971	81512802	Gene ID= novel_gene_chr17_5609 TPM= 33.7 Transcript Type= NA
chr17	81509971	81512874	81509971	81512874	-	ENST00000331925.6@ACTG1	ENST00000331925.6	protein_coding	81512734,81512232,81511903,81511188,81510927,81509971	81512874,81512360,81512142,81511626,81511108,81510833	Gene ID= ENSG00000184009.9 TPM= 941.58 Transcript Type= protein_coding
chr17	81509971	81512841	81509971	81512841	-	transcript5601.chr17.nic@ACTG1	transcript5601.chr17.nic	protein_coding	81512734,81512232,81511903,81511188,81510927,81509971	81512841,81512360,81512142,81511803,81511108,81510833	Gene ID= ENSG00000184009.9 TPM= 97.7 Transcript Type= NA
chr17	81509971	81512841	81509971	81512841	-	transcript5604.chr17.nic@ACTG1	transcript5604.chr17.nic	protein_coding	81512734,81512232,81511188,81510927,81509971	81512841,81512360,81512142,81511108,81510833	Gene ID= ENSG00000184009.9 TPM= 82.83 Transcript Type= NA
chr17	81509999	81511848	81509999	81511848	-	ENST00000574671.5@ACTG1	ENST00000574671.5	protein_coding	81511188,81510927,81509999	81511848,81511108,81510833	Gene ID= ENSG00000184009.9 TPM= 4.6 Transcript Type= retained_intron
chr17	81509988	81512780	81509988	81512780	-	ENST00000573283.5@ACTG1	ENST00000573283.5	protein_coding	81512615,81512232,81511903,81511188,81510927,81509988	81512780,81512360,81512142,81511626,81511108,81510833	Gene ID= ENSG00000184009.9 TPM= 12.93 Transcript Type= protein_coding
chr17	81515029	81516409	81515029	81516409	+	transcript5612.chr17.nnic@NA	transcript5612.chr17.nnic	NA	81515029	81516409	Gene ID= novel_gene_chr17_5613 TPM= 4.25 Transcript Type= NA
chr17	81521365	81523389	81521365	81523389	-	transcript5614.chr17.nnic@NA	transcript5614.chr17.nnic	NA	81521365	81523389	Gene ID= novel_gene_chr17_5615 TPM= 3.19 Transcript Type= NA
chr17	81539885	81552377	81539885	81552377	-	ENST00000327787.12@FAAP100	ENST00000327787.12	protein_coding	81552166,81551928,81550248,81549206,81546909,81545746,81544004,81541309,81539885	81552377,81552052,81551203,81549362,81547678,81545882,81544120,81541395,81540950	Gene ID= ENSG00000185504.16 TPM= 32.93 Transcript Type= protein_coding
chr17	81547202	81549071	81547202	81549071	+	transcript5641.chr17.nnic@NA	transcript5641.chr17.nnic	NA	81547202	81549071	Gene ID= novel_gene_chr17_5642 TPM= 31.86 Transcript Type= NA
chr17	81556887	81637146	81556887	81637146	-	ENST00000331134.10@NPLOC4	ENST00000331134.10	protein_coding	81636916,81629725,81622166,81613318,81610210,81608728,81606691,81604548,81600341,81597245,81596116,81588944,81572017,81569016,81567417,81565505,81556887	81637146,81629805,81622278,81613494,81610258,81608822,81606814,81604727,81600427,81597316,81596242,81589104,81572088,81569111,81567533,81565607,81559416	Gene ID= ENSG00000182446.13 TPM= 183.75 Transcript Type= protein_coding
chr17	81585303	81637112	81585303	81637112	-	transcript5626.chr17.nnic@NPLOC4	transcript5626.chr17.nnic	protein_coding	81636916,81629725,81622166,81613318,81610210,81608728,81606691,81604548,81600341,81597245,81596116,81588944,81585303	81637112,81629805,81622278,81613494,81610258,81608822,81606814,81604727,81600427,81597316,81596242,81589104,81585659	Gene ID= ENSG00000182446.13 TPM= 2.12 Transcript Type= NA
chr17	81564133	81564803	81564133	81564803	+	transcript5637.chr17.nnic@NA	transcript5637.chr17.nnic	NA	81564133	81564803	Gene ID= novel_gene_chr17_5638 TPM= 3.19 Transcript Type= NA
chr17	81582253	81585193	81582253	81585193	+	transcript5639.chr17.nnic@NA	transcript5639.chr17.nnic	NA	81582253	81585193	Gene ID= novel_gene_chr17_5640 TPM= 15.93 Transcript Type= NA
chr17	81665036	81666635	81665036	81666635	-	ENST00000575963.1@OXLD1	ENST00000575963.1	protein_coding	81665036	81666635	Gene ID= ENSG00000204237.4 TPM= 10.62 Transcript Type= retained_intron
chr17	81665036	81666588	81665036	81666588	-	ENST00000374741.3@OXLD1	ENST00000374741.3	protein_coding	81666518,81665036	81666588,81665584	Gene ID= ENSG00000204237.4 TPM= 13.81 Transcript Type= protein_coding
chr17	81666364	81673899	81666364	81673899	+	ENST00000329214.12@CCDC137	ENST00000329214.12	protein_coding	81666364,81667729,81670225,81671744,81672076,81672495	81666900,81667862,81670453,81671826,81672155,81673899	Gene ID= ENSG00000185298.12 TPM= 21.24 Transcript Type= protein_coding
chr17	81668694	81670044	81668694	81670044	-	transcript5652.chr17.nnic@NA	transcript5652.chr17.nnic	NA	81668694	81670044	Gene ID= novel_gene_chr17_5653 TPM= 2.12 Transcript Type= NA
chr17	81681174	81683924	81681174	81683924	-	ENST00000397498.8@ARL16	ENST00000397498.8	protein_coding	81683693,81683536,81683013,81682034,81681174	81683924,81683594,81683126,81682149,81681879	Gene ID= ENSG00000214087.8 TPM= 14.87 Transcript Type= protein_coding
chr17	81681187	81683785	81681187	81683785	-	transcript5674.chr17.nic@ARL16	transcript5674.chr17.nic	protein_coding	81683693,81683536,81682034,81681187	81683785,81683594,81682149,81681879	Gene ID= ENSG00000214087.8 TPM= 6.37 Transcript Type= NA
chr17	81683932	81702119	81683932	81702119	+	ENST00000329138.8@HGS	ENST00000329138.8	protein_coding	81683932,81685605,81686312,81687003,81688704,81690182,81690674,81691447,81693503,81693654,81693870,81694815,81694924,81695164,81695786,81696357,81696607,81696824,81700467,81700695,81701045,81701508	81684103,81685689,81686387,81687095,81688827,81690234,81690742,81691571,81693581,81693752,81693965,81694853,81695067,81695223,81695999,81696529,81696747,81696998,81700600,81700814,81701131,81702119	Gene ID= ENSG00000185359.12 TPM= 112.06 Transcript Type= protein_coding
chr17	81683969	81702119	81683969	81702119	+	transcript5663.chr17.nic@HGS	transcript5663.chr17.nic	protein_coding	81683969,81685605,81686312,81687003,81688704,81690182,81690674,81691447,81693503,81693654,81693870,81694815,81694924,81695164,81695786,81696607,81696824,81700467,81700695,81701045,81701508	81684103,81685689,81686387,81687095,81688827,81690234,81690742,81691571,81693581,81693752,81693965,81694853,81695067,81695223,81696529,81696747,81696998,81700600,81700814,81701131,81702119	Gene ID= ENSG00000185359.12 TPM= 14.34 Transcript Type= NA
chr17	81702121	81703299	81702121	81703299	-	transcript5678.chr17.nnic@NA	transcript5678.chr17.nnic	NA	81702121	81703299	Gene ID= novel_gene_chr17_5679 TPM= 3.19 Transcript Type= NA
chr17	81703357	81707526	81703357	81707526	+	ENST00000333676.7@MRPL12	ENST00000333676.7	protein_coding	81703357,81704244,81704633,81706906,81707124	81703575,81704430,81704716,81707040,81707526	Gene ID= ENSG00000262814.7 TPM= 201.28 Transcript Type= protein_coding
chr17	81708224	81711114	81708224	81711114	+	transcript5687.chr17.nnic@NA	transcript5687.chr17.nnic	NA	81708224	81711114	Gene ID= novel_gene_chr17_5688 TPM= 3.19 Transcript Type= NA
chr17	81712341	81721012	81712341	81721012	+	ENST00000350690.9@SLC25A10	ENST00000350690.9	protein_coding	81712341,81714953,81715478,81715693,81716009,81716812,81717002,81717399,81717784,81719831,81719976	81712519,81715072,81715592,81715741,81716050,81716855,81717072,81717491,81717861,81719887,81721012	Gene ID= ENSG00000183048.11 TPM= 11.68 Transcript Type= protein_coding
chr17	81822417	81833307	81822417	81833307	-	transcript5695.chr17.nic@MCRIP1	transcript5695.chr17.nic	protein_coding	81833238,81824499,81824287,81823209,81822417	81833307,81824554,81824405,81823311,81822907	Gene ID= ENSG00000225663.7 TPM= 5.49 Transcript Type= NA
chr17	81822417	81833291	81822417	81833291	-	ENST00000538396.5@MCRIP1	ENST00000538396.5	protein_coding	81833238,81824499,81824287,81823412,81823209,81822417	81833291,81824554,81824405,81823513,81823311,81822907	Gene ID= ENSG00000225663.7 TPM= 56.48 Transcript Type= protein_coding
chr17	81822411	81833268	81822411	81833268	-	ENST00000455127.6@MCRIP1	ENST00000455127.6	protein_coding	81833238,81824499,81824287,81823412,81822411	81833268,81824554,81824405,81823513,81823311	Gene ID= ENSG00000225663.7 TPM= 99.49 Transcript Type= protein_coding
chr17	81822429	81833302	81822429	81833302	-	ENST00000573478.5@MCRIP1	ENST00000573478.5	protein_coding	81833238,81824499,81824287,81822429	81833302,81824554,81824405,81823311	Gene ID= ENSG00000225663.7 TPM= 7.44 Transcript Type= protein_coding
chr17	81825053	81826835	81825053	81826835	+	transcript5699.chr17.nnic@NA	transcript5699.chr17.nnic	NA	81825053	81826835	Gene ID= novel_gene_chr17_5700 TPM= 7.44 Transcript Type= NA
chr17	81843159	81860694	81843159	81860694	-	ENST00000331483.8@P4HB	ENST00000331483.8	protein_coding	81860327,81859181,81855453,81855142,81847243,81846947,81846429,81845871,81845561,81845144,81843159	81860694,81859387,81855586,81855279,81847347,81847072,81846629,81845991,81845742,81845230,81844092	Gene ID= ENSG00000185624.14 TPM= 967.63 Transcript Type= protein_coding
chr17	81867721	81871406	81867721	81871406	-	ENST00000269321.11@ARHGDIA	ENST00000269321.11	protein_coding	81871298,81869741,81869542,81869330,81869173,81867721	81871406,81869957,81869625,81869406,81869236,81869075	Gene ID= ENSG00000141522.11 TPM= 132.77 Transcript Type= protein_coding
chr17	81878425	81881106	81878425	81881106	-	ENST00000582866.1@AC145207.5	ENST00000582866.1	lincRNA	81878425	81881106	Gene ID= ENSG00000263731.1 TPM= 5.31 Transcript Type= lincRNA
chr17	81881767	81882451	81881767	81882451	+	transcript5770.chr17.nnic@NA	transcript5770.chr17.nnic	NA	81881767	81882451	Gene ID= novel_gene_chr17_5771 TPM= 2.12 Transcript Type= NA
chr17	81887844	81891586	81887844	81891586	-	ENST00000505490.2@ALYREF	ENST00000505490.2	protein_coding	81891323,81890689,81889182,81888520,81888241,81887844	81891586,81890820,81889329,81888583,81888418,81888145	Gene ID= ENSG00000183684.7 TPM= 99.84 Transcript Type= protein_coding
chr17	81891938	81900254	81891938	81900254	+	ENST00000392376.7@ANAPC11	ENST00000392376.7	protein_coding	81891938,81893552,81894467,81899920	81892106,81893614,81894586,81900254	Gene ID= ENSG00000141552.17 TPM= 1.06 Transcript Type= protein_coding
chr17	81891720	81900252	81891720	81900252	+	ENST00000579978.5@ANAPC11	ENST00000579978.5	protein_coding	81891720,81894467,81899920	81891841,81894586,81900252	Gene ID= ENSG00000141552.17 TPM= 41.42 Transcript Type= protein_coding
chr17	81891746	81900254	81891746	81900254	+	ENST00000571874.6@ANAPC11	ENST00000571874.6	protein_coding	81891746,81893552,81894467,81899920	81891863,81893614,81894586,81900254	Gene ID= ENSG00000141552.17 TPM= 189.06 Transcript Type= protein_coding
chr17	81891723	81894807	81891723	81894807	+	ENST00000582222.5@ANAPC11	ENST00000582222.5	protein_coding	81891723,81893552,81894467	81891841,81893614,81894807	Gene ID= ENSG00000141552.17 TPM= 1.06 Transcript Type= protein_coding
chr17	81891732	81900356	81891732	81900356	+	ENST00000574924.6@ANAPC11	ENST00000574924.6	protein_coding	81891732,81893552,81894467,81899920	81891833,81893614,81894586,81900356	Gene ID= ENSG00000141552.17 TPM= 3.19 Transcript Type= protein_coding
chr17	81891723	81900356	81891723	81900356	+	ENST00000571024.6@ANAPC11	ENST00000571024.6	protein_coding	81891723,81894467,81899920	81891833,81894586,81900356	Gene ID= ENSG00000141552.17 TPM= 2.12 Transcript Type= protein_coding
chr17	81891723	81900253	81891723	81900253	+	ENST00000577425.5@ANAPC11	ENST00000577425.5	protein_coding	81891723,81894467,81899920	81891833,81894624,81900253	Gene ID= ENSG00000141552.17 TPM= 1.06 Transcript Type= protein_coding
chr17	81904203	81911430	81904203	81911430	-	transcript5742.chr17.nnic@PCYT2	transcript5742.chr17.nnic	protein_coding	81911267,81909514,81908876,81908568,81907773,81907554,81906760,81906464,81906100,81905382,81905066,81904203	81911430,81909602,81909037,81908634,81907857,81907598,81906898,81906546,81906177,81905447,81905154,81904944	Gene ID= ENSG00000185813.10 TPM= 5.31 Transcript Type= NA
chr17	81904367	81911413	81904367	81911413	-	ENST00000571105.5@PCYT2	ENST00000571105.5	protein_coding	81911267,81909514,81908876,81908568,81907773,81907554,81906760,81906464,81906100,81905670,81905066,81904367	81911413,81909602,81909037,81908634,81907857,81907598,81906898,81906546,81906177,81905735,81905154,81904944	Gene ID= ENSG00000185813.10 TPM= 3.19 Transcript Type= protein_coding
chr17	81904343	81911406	81904343	81911406	-	ENST00000538721.6@PCYT2	ENST00000538721.6	protein_coding	81911267,81909514,81908876,81908568,81907773,81907554,81907204,81906760,81906464,81906100,81905670,81905382,81905066,81904343	81911406,81909602,81909037,81908634,81907857,81907598,81907257,81906898,81906546,81906177,81905735,81905447,81905154,81904944	Gene ID= ENSG00000185813.10 TPM= 2.12 Transcript Type= protein_coding
chr17	81911939	81918194	81911939	81918194	-	ENST00000328666.10@SIRT7	ENST00000328666.10	protein_coding	81918039,81917830,81917615,81915611,81915440,81914604,81914294,81914087,81913774,81911939	81918194,81917967,81917719,81915681,81915512,81914702,81914530,81914167,81913880,81912614	Gene ID= ENSG00000187531.13 TPM= 6.37 Transcript Type= protein_coding
chr17	81911939	81918178	81911939	81918178	-	transcript5773.chr17.nic@SIRT7	transcript5773.chr17.nic	protein_coding	81917830,81917615,81915611,81915440,81914604,81914294,81914087,81913774,81911939	81918178,81917719,81915681,81915512,81914702,81914530,81914167,81913880,81912614	Gene ID= ENSG00000187531.13 TPM= 2.12 Transcript Type= NA
chr17	81916461	81918185	81916461	81918185	-	transcript5783.chr17.nic@SIRT7	transcript5783.chr17.nic	protein_coding	81918039,81917830,81916461	81918185,81917967,81917719	Gene ID= ENSG00000187531.13 TPM= 2.12 Transcript Type= NA
chr17	81932384	81937328	81932384	81937328	-	ENST00000619204.4@PYCR1	ENST00000619204.4	protein_coding	81937262,81936748,81936123,81935337,81934926,81934653,81934326,81932384	81937328,81936861,81936193,81935516,81935147,81934745,81934489,81933376	Gene ID= ENSG00000183010.16 TPM= 31.86 Transcript Type= protein_coding
chr17	81932384	81937328	81932384	81937328	-	ENST00000629768.2@PYCR1	ENST00000629768.2	protein_coding	81937262,81936748,81936123,81935337,81934926,81934653,81932384	81937328,81936861,81936193,81935516,81935147,81934745,81933376	Gene ID= ENSG00000183010.16 TPM= 1.06 Transcript Type= protein_coding
chr17	81939645	81941906	81939645	81941906	-	transcript5792.chr17.nnic@NA	transcript5792.chr17.nnic	NA	81939645	81941906	Gene ID= novel_gene_chr17_5793 TPM= 10.62 Transcript Type= NA
chr17	81977627	82017406	81977627	82017406	+	transcript5794.chr17.nnic@ASPSCR1	transcript5794.chr17.nnic	protein_coding	81977627,81979184,81982614,81983554,81985507,81994821,81995992,81996420,82009037,82009486,82009956,82010802,82011543,82012231,82016476,82016800,82016941,82017309	81977748,81979239,81982676,81983668,81985607,81994878,81996065,81996846,82009191,82009567,82010052,82010868,82011605,82012283,82016527,82016869,82017113,82017406	Gene ID= ENSG00000169696.15 TPM= 2.66 Transcript Type= NA
chr17	81977550	82017406	81977550	82017406	+	ENST00000306739.8@ASPSCR1	ENST00000306739.8	protein_coding	81977550,81979184,81983554,81985507,81994821,81995992,81996420,82009037,82009486,82010802,82011543,82012231,82016476,82016800,82016941,82017309	81977748,81979239,81983668,81985607,81994878,81996065,81996846,82009191,82009567,82010868,82011605,82012283,82016527,82016869,82017113,82017406	Gene ID= ENSG00000169696.15 TPM= 64.79 Transcript Type= protein_coding
chr17	81977638	82017406	81977638	82017406	+	transcript5800.chr17.nnic@ASPSCR1	transcript5800.chr17.nnic	protein_coding	81977638,81979184,81983554,81985507,81994821,81995992,81996420,82009037,82009486,82010802,82011543,82012231,82016476,82016800,82016941,82017309	81977748,81979239,81983668,81985607,81994878,81996065,81997034,82009191,82009567,82010868,82011605,82012283,82016527,82016869,82017113,82017406	Gene ID= ENSG00000169696.15 TPM= 3.72 Transcript Type= NA
chr17	81977621	82017406	81977621	82017406	+	transcript5802.chr17.nic@ASPSCR1	transcript5802.chr17.nic	protein_coding	81977621,81983554,81985507,81994821,81995992,81996420,82009037,82009486,82010802,82011543,82012231,82016476,82016800,82016941,82017309	81977748,81983668,81985607,81994878,81996065,81996846,82009191,82009567,82010868,82011605,82012283,82016527,82016869,82017113,82017406	Gene ID= ENSG00000169696.15 TPM= 5.31 Transcript Type= NA
chr17	81977642	81999644	81977642	81999644	+	transcript5809.chr17.nic@ASPSCR1	transcript5809.chr17.nic	protein_coding	81977642,81979184,81983554,81985507,81994821,81995992,81996420	81977748,81979239,81983668,81985607,81994878,81996065,81999644	Gene ID= ENSG00000169696.15 TPM= 3.19 Transcript Type= NA
chr17	82001976	82003019	82001976	82003019	-	transcript5812.chr17.nnic@NA	transcript5812.chr17.nnic	NA	82001976	82003019	Gene ID= novel_gene_chr17_5813 TPM= 16.99 Transcript Type= NA
chr17	82018703	82022918	82018703	82022918	-	ENST00000392359.7@CENPX	ENST00000392359.7	protein_coding	82022826,82019858,82019641,82019293,82018703	82022918,82019909,82019694,82019381,82019219	Gene ID= ENSG00000169689.14 TPM= 27.97 Transcript Type= protein_coding
chr17	82018703	82022918	82018703	82022918	-	ENST00000306704.10@CENPX	ENST00000306704.10	protein_coding	82022826,82019858,82019293,82018703	82022918,82019909,82019381,82019219	Gene ID= ENSG00000169689.14 TPM= 27.97 Transcript Type= protein_coding
chr17	82018703	82022892	82018703	82022892	-	ENST00000580435.5@CENPX	ENST00000580435.5	protein_coding	82022826,82019858,82019308,82018703	82022892,82019909,82019381,82019219	Gene ID= ENSG00000169689.14 TPM= 1.41 Transcript Type= protein_coding
chr17	82023302	82031151	82023302	82031151	+	ENST00000306688.7@LRRC45	ENST00000306688.7	protein_coding	82023302,82024278,82024693,82025000,82025379,82026899,82027386,82027674,82028011,82028234,82028397,82028613,82029093,82029543,82030065,82030319,82030609	82023863,82024339,82024763,82025178,82025507,82027011,82027444,82027751,82028146,82028311,82028508,82028683,82029185,82029635,82030238,82030466,82031151	Gene ID= ENSG00000169683.7 TPM= 22.31 Transcript Type= protein_coding
chr17	82035858	82037732	82035858	82037732	-	ENST00000306869.6@DCXR	ENST00000306869.6	protein_coding	82037631,82037450,82036859,82036721,82036544,82036384,82036191,82035858	82037732,82037547,82037013,82036763,82036643,82036448,82036308,82036063	Gene ID= ENSG00000169738.7 TPM= 143.74 Transcript Type= protein_coding
chr17	82035879	82037698	82035879	82037698	-	ENST00000580320.5@DCXR	ENST00000580320.5	protein_coding	82037450,82036859,82036721,82036544,82036384,82036191,82035879	82037698,82037013,82036763,82036643,82036448,82036308,82036063	Gene ID= ENSG00000169738.7 TPM= 12.75 Transcript Type= retained_intron
chr17	82035881	82037374	82035881	82037374	-	transcript5883.chr17.nic@DCXR	transcript5883.chr17.nic	protein_coding	82036859,82036721,82036544,82036384,82036191,82035881	82037374,82036763,82036643,82036448,82036308,82036063	Gene ID= ENSG00000169738.7 TPM= 20.89 Transcript Type= NA
chr17	82035881	82037351	82035881	82037351	-	transcript5894.chr17.nic@DCXR	transcript5894.chr17.nic	protein_coding	82036859,82036721,82036384,82036191,82035881	82037351,82036763,82036643,82036308,82036063	Gene ID= ENSG00000169738.7 TPM= 5.49 Transcript Type= NA
chr17	82037905	82039380	82037905	82039380	+	ENST00000584705.1@AC137723.1	ENST00000584705.1	antisense_RNA	82037905,82039181	82038413,82039380	Gene ID= ENSG00000264569.1 TPM= 2.12 Transcript Type= antisense_RNA
chr17	82047902	82051774	82047902	82051774	-	ENST00000310496.8@RFNG	ENST00000310496.8	protein_coding	82051500,82051294,82050662,82050402,82049918,82049677,82049031,82047902	82051774,82051342,82050764,82050555,82050006,82049842,82049116,82048807	Gene ID= ENSG00000169733.11 TPM= 27.62 Transcript Type= protein_coding
chr17	82051875	82057470	82051875	82057470	+	ENST00000320548.8@GPS1	ENST00000320548.8	protein_coding	82051875,82052375,82053274,82053868,82054510,82054898,82055162,82055740,82056001,82056286,82056470,82056629,82056840,82057053	82051964,82052459,82053366,82054049,82054810,82054975,82055222,82055825,82056095,82056391,82056550,82056766,82056974,82057470	Gene ID= ENSG00000169727.12 TPM= 10.11 Transcript Type= protein_coding
chr17	82051865	82057470	82051865	82057470	+	ENST00000578552.5@GPS1	ENST00000578552.5	protein_coding	82051865,82053274,82053868,82054510,82054898,82055162,82055740,82056001,82056286,82056470,82056629,82056840,82057053	82051964,82053366,82054049,82054810,82054975,82055222,82055825,82056095,82056391,82056550,82056766,82056974,82057470	Gene ID= ENSG00000169727.12 TPM= 135.46 Transcript Type= protein_coding
chr17	82051078	82057470	82051078	82057470	+	transcript5849.chr17.nic@GPS1	transcript5849.chr17.nic	protein_coding	82051078,82053868,82054510,82054898,82055162,82055740,82056001,82056286,82056470,82056629,82056840,82057053	82053366,82054049,82054810,82054975,82055222,82055825,82056095,82056391,82056550,82056766,82056974,82057470	Gene ID= ENSG00000169727.12 TPM= 8.6 Transcript Type= NA
chr17	82051909	82057470	82051909	82057470	+	ENST00000306823.10@GPS1	ENST00000306823.10	protein_coding	82051909,82053274,82053868,82054498,82054898,82055162,82055740,82056001,82056286,82056470,82056629,82056840,82057053	82051964,82053366,82054049,82054810,82054975,82055222,82055825,82056095,82056391,82056550,82056766,82056974,82057470	Gene ID= ENSG00000169727.12 TPM= 10.26 Transcript Type= protein_coding
chr17	82051897	82057470	82051897	82057470	+	ENST00000623691.3@GPS1	ENST00000623691.3	protein_coding	82051897,82053274,82053868,82054510,82054898,82055165,82055740,82056001,82056286,82056470,82056629,82056840,82057053	82051964,82053366,82054049,82054810,82054975,82055222,82055825,82056095,82056391,82056550,82056766,82056974,82057470	Gene ID= ENSG00000169727.12 TPM= 22.87 Transcript Type= protein_coding
chr17	82057880	82065856	82057880	82065856	-	transcript5831.chr17.nic@DUS1L	transcript5831.chr17.nic	protein_coding	82065613,82064823,82064126,82063468,82062861,82061901,82061557,82061209,82060865,82060701,82059948,82058781,82058341,82057880	82065856,82065069,82064234,82063518,82062973,82061983,82061721,82061353,82060961,82060783,82060093,82058818,82058416,82058254	Gene ID= ENSG00000169718.17 TPM= 6.02 Transcript Type= NA
chr17	82057880	82065856	82057880	82065856	-	transcript5846.chr17.nic@DUS1L	transcript5846.chr17.nic	protein_coding	82065613,82064823,82064126,82063468,82062861,82061901,82061618,82061209,82060865,82060701,82059948,82058341,82057880	82065856,82065069,82064234,82063518,82062973,82061983,82061721,82061353,82060961,82060783,82060093,82058818,82058254	Gene ID= ENSG00000169718.17 TPM= 58.42 Transcript Type= NA
chr17	82057880	82065856	82057880	82065856	-	transcript5854.chr17.nic@DUS1L	transcript5854.chr17.nic	protein_coding	82065613,82064823,82064126,82063468,82062861,82061901,82061618,82061209,82060865,82060701,82058341,82057880	82065856,82065069,82064234,82063518,82062973,82061983,82061721,82061353,82060961,82060783,82060093,82058254	Gene ID= ENSG00000169718.17 TPM= 15.22 Transcript Type= NA
chr17	82101460	82106375	82101460	82106375	-	ENST00000584717.1@CCDC57	ENST00000584717.1	protein_coding	82106270,82101460	82106375,82101866	Gene ID= ENSG00000176155.18 TPM= 1.06 Transcript Type= processed_transcript
chr17	82229032	82239479	82229032	82239479	+	ENST00000582743.5@SLC16A3	ENST00000582743.5	protein_coding	82229032,82235983,82236729,82237138,82238702	82229106,82236231,82236872,82237893,82239479	Gene ID= ENSG00000141526.16 TPM= 13.81 Transcript Type= protein_coding
chr17	82242667	82273731	82242667	82273731	-	ENST00000314028.10@CSNK1D	ENST00000314028.10	protein_coding	82273306,82265686,82255429,82253016,82252434,82251379,82249431,82248875,82242667	82273731,82265796,82255577,82253244,82252604,82251527,82249602,82249014,82244831	Gene ID= ENSG00000141551.14 TPM= 53.11 Transcript Type= protein_coding
chr17	82244362	82273697	82244362	82273697	-	ENST00000392334.6@CSNK1D	ENST00000392334.6	protein_coding	82273306,82265686,82255429,82253016,82252434,82251379,82249431,82248875,82245976,82244362	82273697,82265796,82255577,82253244,82252604,82251527,82249602,82249014,82246039,82244831	Gene ID= ENSG00000141551.14 TPM= 13.81 Transcript Type= protein_coding
chr17	82244349	82248141	82244349	82248141	-	transcript5931.chr17.nnic@NA	transcript5931.chr17.nnic	NA	82244349	82248141	Gene ID= novel_gene_chr17_5932 TPM= 4.25 Transcript Type= NA
chr17	82321024	82333998	82321024	82333998	-	ENST00000269389.7@SECTM1	ENST00000269389.7	protein_coding	82333700,82327147,82324582,82322878,82321024	82333998,82327292,82324890,82323011,82322370	Gene ID= ENSG00000141574.7 TPM= 3.19 Transcript Type= protein_coding
chr17	82389223	82418637	82389223	82418637	-	ENST00000313056.9@OGFOD3	ENST00000313056.9	protein_coding	82418412,82415398,82411455,82409368,82406418,82405324,82403937,82398196,82389223	82418637,82415627,82411530,82409410,82406482,82405380,82404090,82398319,82392534	Gene ID= ENSG00000181396.12 TPM= 8.5 Transcript Type= protein_coding
chr17	82390116	82393911	82390116	82393911	-	ENST00000578586.1@OGFOD3	ENST00000578586.1	protein_coding	82390116	82393911	Gene ID= ENSG00000181396.12 TPM= 5.31 Transcript Type= retained_intron
chr17	82418342	82442645	82418342	82442645	+	transcript5937.chr17.nic@HEXDC	transcript5937.chr17.nic	protein_coding	82418342,82419749,82424394,82428558,82433658,82435689,82436667,82437168,82439631,82440997,82441165,82441800,82442177	82418740,82419883,82424503,82428645,82433822,82435872,82436738,82437363,82439713,82441075,82441266,82441889,82442645	Gene ID= ENSG00000169660.15 TPM= 5.05 Transcript Type= NA
chr17	82418318	82442645	82418318	82442645	+	ENST00000337014.10@HEXDC	ENST00000337014.10	protein_coding	82418318,82419749,82424394,82428558,82433658,82435689,82436667,82437168,82439631,82440997,82441800,82442177	82418740,82419883,82424503,82428645,82433822,82435872,82436738,82437363,82439713,82441266,82441889,82442645	Gene ID= ENSG00000169660.15 TPM= 2.39 Transcript Type= protein_coding
chr17	82418342	82442645	82418342	82442645	+	transcript5941.chr17.nic@HEXDC	transcript5941.chr17.nic	protein_coding	82418342,82419749,82424394,82428558,82433658,82435689,82436667,82439631,82440997,82441165,82441800,82442177	82418740,82419883,82424503,82428645,82433822,82435872,82437363,82440334,82441075,82441266,82441889,82442645	Gene ID= ENSG00000169660.15 TPM= 3.98 Transcript Type= NA
chr17	82440373	82442811	82440373	82442811	-	transcript5966.chr17.nnic@NA	transcript5966.chr17.nnic	NA	82440373	82442811	Gene ID= novel_gene_chr17_5967 TPM= 3.45 Transcript Type= NA
chr17	82442643	82450829	82442643	82450829	-	ENST00000306645.9@C17orf62	ENST00000306645.9	protein_coding	82450700,82449170,82447580,82446623,82445864,82444447,82442643	82450829,82449292,82447621,82446696,82445960,82444591,82444124	Gene ID= ENSG00000178927.17 TPM= 26.2 Transcript Type= protein_coding
chr17	82442644	82450829	82442644	82450829	-	ENST00000434650.6@C17orf62	ENST00000434650.6	protein_coding	82450700,82449170,82446623,82445864,82444447,82442644	82450829,82449292,82446696,82445960,82444591,82444124	Gene ID= ENSG00000178927.17 TPM= 9.21 Transcript Type= protein_coding
chr17	82442644	82450776	82442644	82450776	-	ENST00000584024.5@C17orf62	ENST00000584024.5	protein_coding	82450700,82449170,82447580,82445864,82444447,82442644	82450776,82449292,82447621,82445960,82444591,82444124	Gene ID= ENSG00000178927.17 TPM= 7.08 Transcript Type= nonsense_mediated_decay
chr17	82458664	82488265	82458664	82488265	+	ENST00000412079.6@NARF	ENST00000412079.6	protein_coding	82458664,82459992,82464287,82468764,82472564,82478800,82481082,82481813,82483187,82483716,82484813,82485497,82487916	82458830,82460072,82464430,82468896,82472698,82478918,82481211,82481835,82483304,82483779,82484950,82485654,82488265	Gene ID= ENSG00000141562.17 TPM= 1.77 Transcript Type= protein_coding
chr17	82458185	82488255	82458185	82488255	+	ENST00000390006.8@NARF	ENST00000390006.8	protein_coding	82458185,82459992,82464287,82468764,82472564,82478800,82481082,82483716,82484813,82485497,82487916	82458508,82460072,82464430,82468896,82472698,82478918,82481211,82483779,82484950,82485654,82488255	Gene ID= ENSG00000141562.17 TPM= 12.03 Transcript Type= protein_coding
chr17	82458606	82490537	82458606	82490537	+	ENST00000309794.15@NARF	ENST00000309794.15	protein_coding	82458606,82459992,82464287,82468764,82472564,82478800,82481082,82483716,82484813,82485497,82487916	82458830,82460072,82464430,82468896,82472698,82478918,82481211,82483779,82484950,82485654,82490537	Gene ID= ENSG00000141562.17 TPM= 57.36 Transcript Type= protein_coding
chr17	82458202	82488259	82458202	82488259	+	transcript5984.chr17.nic@NARF	transcript5984.chr17.nic	protein_coding	82458202,82459992,82464287,82468764,82472564,82478800,82481082,82483716,82485497,82487916	82458517,82460072,82464430,82468896,82472698,82478918,82481211,82484950,82485654,82488259	Gene ID= ENSG00000141562.17 TPM= 2.47 Transcript Type= NA
chr17	82458712	82488259	82458712	82488259	+	ENST00000577812.5@NARF	ENST00000577812.5	protein_coding	82458712,82459992,82464287,82468764,82472564,82478800,82481082,82483716,82485497,82487916	82458830,82460072,82464430,82468896,82472698,82478918,82481211,82484950,82485654,82488259	Gene ID= ENSG00000141562.17 TPM= 7.08 Transcript Type= retained_intron
chr17	82458200	82459870	82458200	82459870	+	transcript5990.chr17.nnic@NA	transcript5990.chr17.nnic	NA	82458200	82459870	Gene ID= novel_gene_chr17_5991 TPM= 2.12 Transcript Type= NA
chr17	82519694	82587219	82519694	82587219	+	transcript5999.chr17.nic@FOXK2	transcript5999.chr17.nic	protein_coding	82519694,82563354,82568054,82571724,82582741,82584013,82585904,82587063	82520307,82563548,82568201,82571870,82582934,82584188,82586200,82587219	Gene ID= ENSG00000141568.20 TPM= 2.66 Transcript Type= NA
chr17	82519715	82604607	82519715	82604607	+	ENST00000335255.9@FOXK2	ENST00000335255.9	protein_coding	82519715,82563354,82568054,82571724,82582741,82584013,82585904,82587063,82601303	82520307,82563548,82568201,82571870,82582934,82584188,82586200,82587272,82604607	Gene ID= ENSG00000141568.20 TPM= 16.46 Transcript Type= protein_coding
chr17	82581480	82582020	82581480	82582020	-	transcript6014.chr17.nnic@NA	transcript6014.chr17.nnic	NA	82581480	82582020	Gene ID= novel_gene_chr17_6015 TPM= 4.25 Transcript Type= NA
chr17	82614562	82648535	82614562	82648535	-	ENST00000392325.8@WDR45B	ENST00000392325.8	protein_coding	82648274,82643949,82630921,82627204,82625389,82621609,82619043,82617296,82616524,82614562	82648535,82644023,82631022,82627291,82625483,82621799,82619128,82617397,82616645,82616025	Gene ID= ENSG00000141580.15 TPM= 68.51 Transcript Type= protein_coding
chr17	82614576	82625950	82614576	82625950	-	transcript6005.chr17.nic@WDR45B	transcript6005.chr17.nic	protein_coding	82625389,82621609,82619043,82617296,82616524,82614576	82625950,82621799,82619128,82617397,82616645,82616025	Gene ID= ENSG00000141580.15 TPM= 15.4 Transcript Type= NA
chr17	82654973	82698728	82654973	82698728	-	ENST00000571995.5@RAB40B	ENST00000571995.5	protein_coding	82698455,82664496,82660987,82659580,82658491,82654973	82698728,82664556,82661047,82659657,82658713,82658134	Gene ID= ENSG00000141542.10 TPM= 40.36 Transcript Type= protein_coding
chr17	82695198	82698718	82695198	82698718	-	transcript6029.chr17.nic@RAB40B	transcript6029.chr17.nic	protein_coding	82698455,82695198	82698718,82696853	Gene ID= ENSG00000141542.10 TPM= 3.19 Transcript Type= NA
chr17	82696461	82698718	82696461	82698718	-	transcript6030.chr17.nic@RAB40B	transcript6030.chr17.nic	protein_coding	82698455,82696461	82698718,82696853	Gene ID= ENSG00000141542.10 TPM= 2.12 Transcript Type= NA
chr17	82657067	82698687	82657067	82698687	-	ENST00000269347.10@RAB40B	ENST00000269347.10	protein_coding	82698455,82696389,82664496,82660987,82659580,82658491,82657067	82698687,82696853,82664556,82661047,82659657,82658713,82658134	Gene ID= ENSG00000141542.10 TPM= 14.87 Transcript Type= protein_coding
chr17	82716683	82728017	82716683	82728017	+	ENST00000269373.10@FN3KRP	ENST00000269373.10	protein_coding	82716683,82718906,82720272,82722804,82726480,82726833	82716896,82719057,82720363,82722886,82726602,82728017	Gene ID= ENSG00000141560.14 TPM= 64.79 Transcript Type= protein_coding
chr17	82735332	82749677	82735332	82749677	+	transcript6036.chr17.nic@FN3K	transcript6036.chr17.nic	protein_coding	82735332,82738489,82740763,82741311,82748855	82735777,82738640,82740854,82741393,82749677	Gene ID= ENSG00000167363.13 TPM= 4.25 Transcript Type= NA
chr17	82752043	82942704	82752043	82942704	+	transcript6039.chr17.nnic@TBCD	transcript6039.chr17.nnic	protein_coding	82752043,82756165,82763965,82766267,82768420,82772452,82781589,82797757,82800864,82805875,82807608,82809708,82814840,82870224,82884145,82889668,82893547,82900651,82903405,82905936,82907761,82909285,82911758,82920556,82921501,82923652,82924136,82924939,82926400,82927186,82927905,82929113,82929362,82930522,82932658,82937271,82938049,82939367,82941399,82942449	82752377,82756215,82764062,82766368,82768566,82772507,82781721,82797802,82800996,82806011,82807668,82809782,82814934,82870380,82884202,82889697,82893632,82900731,82903478,82906053,82907821,82909307,82911789,82920618,82921577,82923733,82924231,82925057,82926491,82927323,82927988,82929271,82929500,82930643,82932735,82937360,82938136,82939476,82941483,82942704	Gene ID= ENSG00000141556.20 TPM= 22.31 Transcript Type= NA
chr17	82774040	82775593	82774040	82775593	-	transcript6067.chr17.nnic@NA	transcript6067.chr17.nnic	NA	82774040	82775593	Gene ID= novel_gene_chr17_6068 TPM= 2.12 Transcript Type= NA
chr17	82857748	82862063	82857748	82862063	-	transcript6063.chr17.nnic@NA	transcript6063.chr17.nnic	NA	82857748	82862063	Gene ID= novel_gene_chr17_6064 TPM= 5.31 Transcript Type= NA
chr17	82917026	82919285	82917026	82919285	-	transcript6065.chr17.nnic@NA	transcript6065.chr17.nnic	NA	82917026	82919285	Gene ID= novel_gene_chr17_6066 TPM= 2.12 Transcript Type= NA
chr17	82943791	83051817	82943791	83051817	-	transcript6052.chr17.nnic@B3GNTL1	transcript6052.chr17.nnic	protein_coding	83051737,83048471,83035035,83014454,83005115,82965651,82961057,82957359,82957181,82956695,82946879,82943791	83051817,83048570,83035099,83014519,83005210,82965746,82961181,82957494,82957249,82956769,82946983,82944049	Gene ID= ENSG00000175711.8 TPM= 2.66 Transcript Type= NA
chr17	83028808	83051817	83028808	83051817	-	transcript6059.chr17.nnic@B3GNTL1	transcript6059.chr17.nnic	protein_coding	83051737,83048669,83048471,83035035,83030758,83029493,83028808	83051817,83048785,83048570,83035099,83030902,83029589,83029154	Gene ID= ENSG00000175711.8 TPM= 2.12 Transcript Type= NA
chr17	82943791	83051810	82943791	83051810	-	ENST00000320865.3@B3GNTL1	ENST00000320865.3	protein_coding	83051737,83048669,83048471,83035035,83014454,83005115,82965651,82961057,82957359,82957181,82956695,82946879,82943791	83051810,83048785,83048570,83035099,83014519,83005210,82965746,82961181,82957494,82957249,82956769,82946983,82944049	Gene ID= ENSG00000175711.8 TPM= 7.97 Transcript Type= protein_coding
chr17	83056547	83058613	83056547	83058613	+	transcript6069.chr17.nnic@NA	transcript6069.chr17.nnic	NA	83056547	83058613	Gene ID= novel_gene_chr17_6070 TPM= 2.12 Transcript Type= NA
chr17	83079691	83095119	83079691	83095119	+	ENST00000320095.11@METRNL	ENST00000320095.11	protein_coding	83079691,83084938,83093167,83094256	83079985,83085323,83093226,83095119	Gene ID= ENSG00000176845.12 TPM= 12.75 Transcript Type= protein_coding
chr17	83080603	83085757	83080603	83085757	-	transcript6078.chr17.nnic@NA	transcript6078.chr17.nnic	NA	83080603	83085757	Gene ID= novel_gene_chr17_6079 TPM= 18.06 Transcript Type= NA
chr17	83098377	83098987	83098377	83098987	+	ENST00000619443.1@AC130371.2	ENST00000619443.1	lincRNA	83098377	83098987	Gene ID= ENSG00000274370.1 TPM= 1.06 Transcript Type= lincRNA
chr17	83104619	83106827	83104619	83106827	+	transcript6080.chr17.nnic@NA	transcript6080.chr17.nnic	NA	83104619	83106827	Gene ID= novel_gene_chr17_6081 TPM= 2.12 Transcript Type= NA
chr18	158608	214629	158608	214629	+	ENST00000261601.7@USP14	ENST00000261601.7	protein_coding	158608,163308,166787,178933,180236,192842,196637,197616,198047,199202,202880,203098,204564,209971,210386,211133	158714,163453,166819,179037,180339,192900,196767,197696,198132,199316,202945,203190,204692,210031,210493,214629	Gene ID= ENSG00000101557.14 TPM= 7.44 Transcript Type= protein_coding
chr18	214521	268027	214521	268027	-	ENST00000261600.10@THOC1	ENST00000261600.10	protein_coding	267966,265457,265303,264026,260186,259682,259180,254273,252539,247849,246324,226801,225337,225089,224924,224084,223440,218886,216486,215429,214521	268027,265530,265363,264092,260304,259730,259275,254355,252612,247957,246455,226901,225403,225139,224994,224179,223505,218969,216633,215504,214921	Gene ID= ENSG00000079134.11 TPM= 4.25 Transcript Type= protein_coding
chr18	657604	673578	657604	673578	+	ENST00000323274.14@TYMS	ENST00000323274.14	protein_coding	657604,659641,662146,669072,670692,671380,672860	657947,659714,662320,669173,670867,671451,673578	Gene ID= ENSG00000176890.15 TPM= 2.12 Transcript Type= protein_coding
chr18	672549	712653	672549	712653	-	transcript17.chr18.nic@ENOSF1	transcript17.chr18.nic	protein_coding	712504,706470,697240,694248,693882,691204,691068,690549,688574,685921,683246,678696,677743,677345,675321,674161,672549	712653,706578,697355,694334,693908,691276,691106,690631,688608,686008,683380,678737,677872,677444,675402,674406,673076	Gene ID= ENSG00000132199.18 TPM= 4.25 Transcript Type= NA
chr18	673859	712676	673859	712676	-	ENST00000251101.11@ENOSF1	ENST00000251101.11	protein_coding	712504,706470,697240,694248,693882,691204,691068,690549,688574,685921,683246,678696,677743,677345,675321,673859	712676,706578,697355,694334,693908,691276,691106,690631,688608,686008,683380,678737,677872,677444,675402,674406	Gene ID= ENSG00000132199.18 TPM= 4.25 Transcript Type= protein_coding
chr18	686293	688177	686293	688177	+	transcript34.chr18.nnic@NA	transcript34.chr18.nnic	NA	686293	688177	Gene ID= novel_gene_chr18_35 TPM= 4.25 Transcript Type= NA
chr18	699275	702284	699275	702284	+	transcript36.chr18.nnic@NA	transcript36.chr18.nnic	NA	699275	702284	Gene ID= novel_gene_chr18_37 TPM= 4.25 Transcript Type= NA
chr18	721748	812876	721748	812876	-	transcript42.chr18.nnic@YES1	transcript42.chr18.nnic	protein_coding	812670,756557,751705,747920,745948,745708,743260,742918,739735,736808,732834,721748	812876,756835,751804,748018,746051,745857,743415,743097,739811,736961,732965,724632	Gene ID= ENSG00000176105.13 TPM= 2.66 Transcript Type= NA
chr18	721748	812238	721748	812238	-	ENST00000314574.4@YES1	ENST00000314574.4	protein_coding	812114,756557,751705,747920,745948,745708,743260,742918,739735,736808,732834,721748	812238,756835,751804,748018,746051,745857,743415,743097,739811,736961,732965,724632	Gene ID= ENSG00000176105.13 TPM= 7.97 Transcript Type= protein_coding
chr18	2571511	2616635	2571511	2616635	+	ENST00000261597.8@NDC80	ENST00000261597.8	protein_coding	2571511,2572977,2574989,2577746,2577969,2578927,2585113,2587830,2589204,2590018,2595416,2599019,2601396,2606415,2608700,2610759,2616437	2571683,2573086,2575066,2577869,2578141,2579029,2585202,2587923,2589310,2590162,2595621,2599171,2601485,2606507,2608830,2610861,2616635	Gene ID= ENSG00000080986.12 TPM= 1.06 Transcript Type= protein_coding
chr18	2655654	2694589	2655654	2694589	+	transcript59.chr18.nic@SMCHD1	transcript59.chr18.nic	protein_coding	2655654,2666157,2666870,2673281,2674015,2688394,2688628,2694527	2656261,2666232,2667031,2673363,2674145,2688508,2688747,2694589	Gene ID= ENSG00000101596.14 TPM= 2.12 Transcript Type= NA
chr18	2846719	2914041	2846719	2914041	+	transcript64.chr18.nnic@EMILIN2	transcript64.chr18.nnic	protein_coding	2846719,2847809,2884964,2890561,2906783,2908943,2909691,2913067	2846806,2847931,2885139,2892486,2907085,2908975,2909819,2914041	Gene ID= ENSG00000132205.10 TPM= 2.12 Transcript Type= NA
chr18	3163823	3219978	3163823	3219978	-	transcript71.chr18.nic@MYOM1	transcript71.chr18.nic	protein_coding	3219803,3214934,3193818,3188748,3187480,3176042,3174120,3173938,3168817,3163823	3219978,3215251,3193958,3189087,3187637,3176134,3174208,3174000,3168981,3164439	Gene ID= ENSG00000101605.12 TPM= 9.56 Transcript Type= NA
chr18	3185381	3219974	3185381	3219974	-	transcript73.chr18.nic@MYOM1	transcript73.chr18.nic	protein_coding	3219803,3214934,3193818,3188748,3185381	3219974,3215251,3193958,3189087,3187637	Gene ID= ENSG00000101605.12 TPM= 30.8 Transcript Type= NA
chr18	3066807	3220108	3066807	3220108	-	ENST00000356443.8@MYOM1	ENST00000356443.8	protein_coding	3219803,3214934,3193818,3188748,3187480,3176042,3174120,3173938,3168817,3164278,3154947,3151694,3149145,3141939,3135547,3134650,3131375,3129232,3126701,3119869,3116331,3112298,3102474,3100320,3100159,3094170,3090658,3089537,3089174,3086038,3085045,3083989,3083789,3079179,3075725,3075454,3071834,3066807	3220108,3215251,3193958,3189087,3187637,3176134,3174208,3174000,3168981,3164439,3155088,3151893,3149201,3142063,3135730,3134824,3131496,3129519,3126897,3119995,3116515,3112412,3102630,3100426,3100203,3094306,3090802,3089596,3089241,3086151,3085132,3084027,3083894,3079342,3075761,3075476,3071889,3067555	Gene ID= ENSG00000101605.12 TPM= 403.62 Transcript Type= protein_coding
chr18	3066953	3219849	3066953	3219849	-	ENST00000261606.11@MYOM1	ENST00000261606.11	protein_coding	3219803,3214934,3193818,3188748,3187480,3176042,3174120,3173938,3168817,3164278,3154947,3151694,3149145,3141939,3135547,3134650,3131375,3126701,3119869,3116331,3112298,3102474,3100320,3100159,3094170,3090658,3089537,3089174,3086038,3085045,3083989,3083789,3079179,3075725,3075454,3071834,3066953	3219849,3215251,3193958,3189087,3187637,3176134,3174208,3174000,3168981,3164439,3155088,3151893,3149201,3142063,3135730,3134824,3131496,3126897,3119995,3116515,3112412,3102630,3100426,3100203,3094306,3090802,3089596,3089241,3086151,3085132,3084027,3083894,3079342,3075761,3075476,3071889,3067555	Gene ID= ENSG00000101605.12 TPM= 53.11 Transcript Type= protein_coding
chr18	3214773	3219944	3214773	3219944	+	transcript76.chr18.nnic@NA	transcript76.chr18.nnic	NA	3214773	3219944	Gene ID= novel_gene_chr18_77 TPM= 3.19 Transcript Type= NA
chr18	3247530	3256236	3247530	3256236	+	ENST00000217652.7@MYL12A	ENST00000217652.7	protein_coding	3247530,3253233,3253889,3255746	3247909,3253428,3254050,3256236	Gene ID= ENSG00000101608.12 TPM= 1234.35 Transcript Type= protein_coding
chr18	3247907	3248644	3247907	3248644	+	ENST00000608786.1@MYL12A	ENST00000608786.1	protein_coding	3247907	3248644	Gene ID= ENSG00000101608.12 TPM= 7.44 Transcript Type= retained_intron
chr18	3247481	3256227	3247481	3256227	+	ENST00000579226.5@MYL12A	ENST00000579226.5	protein_coding	3247481,3253233,3253889,3255746	3247587,3253428,3254050,3256227	Gene ID= ENSG00000101608.12 TPM= 253.5 Transcript Type= protein_coding
chr18	3247861	3249925	3247861	3249925	+	ENST00000585090.1@MYL12A	ENST00000585090.1	protein_coding	3247861,3249361	3247909,3249925	Gene ID= ENSG00000101608.12 TPM= 1.06 Transcript Type= processed_transcript
chr18	3252275	3258380	3252275	3258380	+	transcript137.chr18.nnic@NA	transcript137.chr18.nnic	NA	3252275,3253233,3253889,3255746	3252325,3253428,3254050,3258380	Gene ID= novel_gene_chr18_138 TPM= 3.19 Transcript Type= NA
chr18	3261909	3278284	3261909	3278284	+	ENST00000237500.9@MYL12B	ENST00000237500.9	protein_coding	3261909,3272884,3277253,3277765	3262237,3273082,3277414,3278284	Gene ID= ENSG00000118680.12 TPM= 252.79 Transcript Type= protein_coding
chr18	3262956	3278284	3262956	3278284	+	ENST00000584539.1@MYL12B	ENST00000584539.1	protein_coding	3262956,3272884,3277253,3277765	3263138,3273082,3277414,3278284	Gene ID= ENSG00000118680.12 TPM= 8.5 Transcript Type= protein_coding
chr18	3449704	3458411	3449704	3458411	+	ENST00000343820.9@TGIF1	ENST00000343820.9	protein_coding	3449704,3456354,3457365	3450505,3456580,3458411	Gene ID= ENSG00000177426.20 TPM= 6.37 Transcript Type= protein_coding
chr18	3449651	3458406	3449651	3458406	+	ENST00000405385.7@TGIF1	ENST00000405385.7	protein_coding	3449651,3456354,3457365	3450070,3456580,3458406	Gene ID= ENSG00000177426.20 TPM= 1.06 Transcript Type= protein_coding
chr18	3601971	3604384	3601971	3604384	+	transcript157.chr18.nnic@NA	transcript157.chr18.nnic	NA	3601971	3604384	Gene ID= novel_gene_chr18_158 TPM= 3.19 Transcript Type= NA
chr18	5238065	5243911	5238065	5243911	+	transcript171.chr18.nnic@LINC00667	transcript171.chr18.nnic	lincRNA	5238065,5240648,5241699,5243594	5239049,5241255,5241889,5243911	Gene ID= ENSG00000263753.6 TPM= 2.12 Transcript Type= NA
chr18	5238100	5243911	5238100	5243911	+	transcript188.chr18.nnic@LINC00667	transcript188.chr18.nnic	lincRNA	5238100,5241699,5243594	5239196,5241889,5243911	Gene ID= ENSG00000263753.6 TPM= 2.12 Transcript Type= NA
chr18	5238065	5243317	5238065	5243317	+	transcript192.chr18.nnic@LINC00667	transcript192.chr18.nnic	lincRNA	5238065,5240648	5239049,5243317	Gene ID= ENSG00000263753.6 TPM= 3.19 Transcript Type= NA
chr18	5238081	5243658	5238081	5243658	+	transcript194.chr18.nnic@LINC00667	transcript194.chr18.nnic	lincRNA	5238081,5240648	5239196,5243658	Gene ID= ENSG00000263753.6 TPM= 2.12 Transcript Type= NA
chr18	5238081	5243936	5238081	5243936	+	transcript195.chr18.nic@LINC00667	transcript195.chr18.nic	lincRNA	5238081,5243594	5241812,5243936	Gene ID= ENSG00000263753.6 TPM= 3.19 Transcript Type= NA
chr18	5237826	5239859	5237826	5239859	+	ENST00000581471.2@LINC00667	ENST00000581471.2	lincRNA	5237826	5239859	Gene ID= ENSG00000263753.6 TPM= 10.62 Transcript Type= lincRNA
chr18	5238100	5246508	5238100	5246508	+	ENST00000582008.5@LINC00667	ENST00000582008.5	lincRNA	5238100,5241699,5243594	5239049,5241812,5246508	Gene ID= ENSG00000263753.6 TPM= 3.19 Transcript Type= lincRNA
chr18	5289019	5296040	5289019	5296040	-	ENST00000357006.8@ZBTB14	ENST00000357006.8	protein_coding	5295813,5293972,5293244,5289019	5296040,5294001,5293327,5292204	Gene ID= ENSG00000198081.10 TPM= 1.06 Transcript Type= protein_coding
chr18	6070112	6072880	6070112	6072880	+	transcript214.chr18.nnic@NA	transcript214.chr18.nnic	NA	6070112	6072880	Gene ID= novel_gene_chr18_215 TPM= 2.12 Transcript Type= NA
chr18	6462144	6463010	6462144	6463010	-	ENST00000489915.1@AP005202.1	ENST00000489915.1	transcribed_processed_pseudogene	6462144	6463010	Gene ID= ENSG00000235552.4 TPM= 42.49 Transcript Type= transcribed_processed_pseudogene
chr18	7682841	7684301	7682841	7684301	+	transcript216.chr18.nnic@NA	transcript216.chr18.nnic	NA	7682841	7684301	Gene ID= novel_gene_chr18_217 TPM= 2.12 Transcript Type= NA
chr18	7774140	8406858	7774140	8406858	+	ENST00000400060.8@PTPRM	ENST00000400060.8	protein_coding	7774140,7888106,7906505,7926568,7949181,7955121,8069686,8076455,8085671,8088749,8113486,8114791,8143647,8244058,8247845,8248150,8252488,8253227,8296368,8314781,8319178,8343423,8370890,8376046,8376462,8378265,8379167,8380296,8384561,8387072,8394476,8406109	7774271,7888377,7906583,7926683,7949355,7955414,8069994,8076564,8085872,8088851,8113759,8114827,8143779,8244209,8247919,8248176,8252499,8253414,8296455,8314857,8319214,8343520,8371006,8376200,8376597,8378414,8379340,8380427,8384686,8387235,8394611,8406858	Gene ID= ENSG00000173482.16 TPM= 34.96 Transcript Type= protein_coding
chr18	7774144	8406856	7774144	8406856	+	transcript223.chr18.nic@PTPRM	transcript223.chr18.nic	protein_coding	7774144,7888106,7906505,7926568,7949181,7955121,8069686,8076455,8085671,8088749,8113486,8114791,8143647,8244058,8247845,8253227,8296368,8314781,8319178,8343423,8370890,8371760,8376046,8376462,8378265,8379167,8380296,8384561,8387072,8394476,8406109	7774271,7888377,7906583,7926683,7949355,7955414,8069994,8076564,8085872,8088851,8113759,8114827,8143779,8244209,8247919,8253414,8296455,8314857,8319214,8343520,8371006,8371810,8376200,8376597,8378414,8379340,8380427,8384686,8387235,8394611,8406856	Gene ID= ENSG00000173482.16 TPM= 12.29 Transcript Type= NA
chr18	7774144	8406955	7774144	8406955	+	transcript226.chr18.nic@PTPRM	transcript226.chr18.nic	protein_coding	7774144,7888106,7906505,7926568,7949181,7955121,8069686,8076455,8085671,8088749,8113486,8114791,8143647,8244058,8247845,8253227,8296368,8314781,8319178,8343423,8370890,8376046,8376462,8378265,8379167,8380296,8384561,8387072,8394476,8406109	7774271,7888377,7906583,7926683,7949355,7955414,8069994,8076564,8085872,8088851,8113759,8114827,8143779,8244209,8247919,8253414,8296455,8314857,8319214,8343520,8371006,8376200,8376597,8378414,8379340,8380427,8384686,8387235,8394611,8406955	Gene ID= ENSG00000173482.16 TPM= 18.31 Transcript Type= NA
chr18	7774144	8159319	7774144	8159319	+	transcript230.chr18.nnic@PTPRM	transcript230.chr18.nnic	protein_coding	7774144,7888106,7906505,7926568,7949181,7955121,8069686,8076455,8085671,8088749,8113486,8114791,8143647,8158689	7774271,7888377,7906583,7926683,7949355,7955414,8069994,8076564,8085872,8088851,8113759,8114827,8143779,8159319	Gene ID= ENSG00000173482.16 TPM= 7.07 Transcript Type= NA
chr18	7774144	7958226	7774144	7958226	+	transcript232.chr18.nic@PTPRM	transcript232.chr18.nic	protein_coding	7774144,7888106,7906505,7926568,7949181,7955121	7774271,7888377,7906583,7926683,7949355,7958226	Gene ID= ENSG00000173482.16 TPM= 8.7 Transcript Type= NA
chr18	7774147	7777342	7774147	7777342	+	transcript233.chr18.nnic@NA	transcript233.chr18.nnic	NA	7774147	7777342	Gene ID= novel_gene_chr18_234 TPM= 2.12 Transcript Type= NA
chr18	8024683	8027889	8024683	8027889	-	transcript237.chr18.nnic@NA	transcript237.chr18.nnic	NA	8024683	8027889	Gene ID= novel_gene_chr18_238 TPM= 5.31 Transcript Type= NA
chr18	8146503	8149972	8146503	8149972	-	transcript239.chr18.nnic@NA	transcript239.chr18.nnic	NA	8146503	8149972	Gene ID= novel_gene_chr18_240 TPM= 2.12 Transcript Type= NA
chr18	8373094	8373900	8373094	8373900	+	transcript235.chr18.nnic@NA	transcript235.chr18.nnic	NA	8373094	8373900	Gene ID= novel_gene_chr18_236 TPM= 2.12 Transcript Type= NA
chr18	8623953	8639381	8623953	8639381	+	transcript245.chr18.nnic@RAB12	transcript245.chr18.nnic	protein_coding	8623953,8624938,8633189,8635533,8636253,8638149	8624143,8624998,8633327,8635622,8636357,8639381	Gene ID= ENSG00000206418.3 TPM= 3.19 Transcript Type= NA
chr18	8609445	8639381	8609445	8639381	+	ENST00000329286.6@RAB12	ENST00000329286.6	protein_coding	8609445,8624938,8633189,8635533,8636253,8638149	8609953,8624998,8633327,8635622,8636357,8639381	Gene ID= ENSG00000206418.3 TPM= 64.79 Transcript Type= protein_coding
chr18	8824894	8832778	8824894	8832778	+	transcript250.chr18.nnic@MTCL1	transcript250.chr18.nnic	protein_coding	8824894,8827555,8831607	8826232,8827610,8832778	Gene ID= ENSG00000168502.17 TPM= 5.31 Transcript Type= NA
chr18	9102683	9134341	9102683	9134341	+	transcript254.chr18.nic@NDUFV2	transcript254.chr18.nic	protein_coding	9102683,9117838,9119326,9119474,9122513,9124874,9126831,9134186	9102797,9117903,9119388,9119590,9122681,9124996,9126907,9134341	Gene ID= ENSG00000178127.12 TPM= 21.24 Transcript Type= NA
chr18	9102630	9134345	9102630	9134345	+	ENST00000318388.10@NDUFV2	ENST00000318388.10	protein_coding	9102630,9117838,9119326,9119474,9122513,9124874,9126831,9134186	9102797,9117903,9119388,9119590,9122681,9124983,9126907,9134345	Gene ID= ENSG00000178127.12 TPM= 644.73 Transcript Type= protein_coding
chr18	9126627	9134295	9126627	9134295	+	ENST00000474740.1@NDUFV2	ENST00000474740.1	protein_coding	9126627,9126831,9134186	9126703,9126907,9134295	Gene ID= ENSG00000178127.12 TPM= 1.06 Transcript Type= processed_transcript
chr18	9118817	9121578	9118817	9121578	-	transcript260.chr18.nnic@NA	transcript260.chr18.nnic	NA	9118817	9121578	Gene ID= novel_gene_chr18_261 TPM= 5.31 Transcript Type= NA
chr18	9135712	9137427	9135712	9137427	-	transcript284.chr18.nnic@NA	transcript284.chr18.nnic	NA	9135712	9137427	Gene ID= novel_gene_chr18_285 TPM= 11.68 Transcript Type= NA
chr18	9136777	9285985	9136777	9285985	+	ENST00000262126.8@ANKRD12	ENST00000262126.8	protein_coding	9136777,9182382,9195551,9204476,9208657,9211584,9216758,9221852,9254211,9263790,9275524,9279549,9280941	9136965,9182519,9195698,9204544,9208803,9211784,9216900,9221999,9258931,9263888,9275667,9279644,9285985	Gene ID= ENSG00000101745.16 TPM= 27.62 Transcript Type= protein_coding
chr18	9136784	9254733	9136784	9254733	+	transcript269.chr18.nic@ANKRD12	transcript269.chr18.nic	protein_coding	9136784,9182382,9195551,9204476,9208657,9211584,9216758,9221852,9254211	9137096,9182519,9195698,9204544,9208803,9211784,9216900,9221999,9254733	Gene ID= ENSG00000101745.16 TPM= 3.19 Transcript Type= NA
chr18	9136783	9255796	9136783	9255796	+	transcript275.chr18.nic@ANKRD12	transcript275.chr18.nic	protein_coding	9136783,9182382,9195551,9208657,9211584,9216758,9221852,9254211	9136965,9182519,9195698,9208803,9211784,9216900,9221999,9255796	Gene ID= ENSG00000101745.16 TPM= 4.25 Transcript Type= NA
chr18	9136784	9255237	9136784	9255237	+	transcript276.chr18.nic@ANKRD12	transcript276.chr18.nic	protein_coding	9136784,9182382,9195551,9208657,9211584,9216758,9221852,9254211	9137096,9182519,9195698,9208803,9211784,9216900,9221999,9255237	Gene ID= ENSG00000101745.16 TPM= 2.12 Transcript Type= NA
chr18	9334767	9402420	9334767	9402420	+	ENST00000262120.9@TWSG1	ENST00000262120.9	protein_coding	9334767,9337193,9359972,9396280,9399346	9334920,9337352,9360071,9396546,9402420	Gene ID= ENSG00000128791.11 TPM= 36.11 Transcript Type= protein_coding
chr18	9350037	9351243	9350037	9351243	-	transcript294.chr18.nnic@NA	transcript294.chr18.nnic	NA	9350037	9351243	Gene ID= novel_gene_chr18_295 TPM= 2.12 Transcript Type= NA
chr18	9475516	9530888	9475516	9530888	+	transcript301.chr18.nic@RALBP1	transcript301.chr18.nic	protein_coding	9475516,9512991,9516845,9522160,9524594,9525720,9530834	9475691,9513289,9517303,9522509,9524755,9525851,9530888	Gene ID= ENSG00000017797.12 TPM= 4.25 Transcript Type= NA
chr18	9546844	9614597	9546844	9614597	-	transcript310.chr18.nic@PPP4R1	transcript310.chr18.nic	protein_coding	9614478,9614226,9595018,9593768,9588711,9588089,9584721,9584515,9583117,9577064,9570157,9563378,9562922,9561980,9559419,9557221,9553322,9550278,9550052,9549197,9546844	9614597,9614270,9595102,9593874,9588853,9588235,9584828,9584580,9583275,9577191,9570683,9563550,9563046,9562075,9559604,9557382,9553422,9550398,9550186,9549338,9547952	Gene ID= ENSG00000154845.15 TPM= 3.19 Transcript Type= NA
chr18	9546791	9614569	9546791	9614569	-	ENST00000400555.7@PPP4R1	ENST00000400555.7	protein_coding	9614478,9614226,9595018,9593768,9588711,9588089,9584721,9584515,9583117,9577064,9570157,9563378,9561980,9559419,9557221,9553322,9550278,9550052,9549197,9546791	9614569,9614270,9595102,9593874,9588853,9588235,9584828,9584580,9583275,9577191,9570683,9563550,9562075,9559604,9557382,9553422,9550398,9550186,9549338,9547952	Gene ID= ENSG00000154845.15 TPM= 9.03 Transcript Type= protein_coding
chr18	9546791	9614558	9546791	9614558	-	ENST00000400556.7@PPP4R1	ENST00000400556.7	protein_coding	9614478,9614226,9595018,9593768,9588711,9588089,9584721,9584515,9583117,9577064,9570157,9563378,9561980,9559419,9557221,9553322,9550278,9550052,9549197,9546791	9614558,9614270,9595153,9593874,9588853,9588235,9584828,9584580,9583275,9577191,9570683,9563550,9562075,9559604,9557382,9553422,9550398,9550186,9549338,9547952	Gene ID= ENSG00000154845.15 TPM= 4.78 Transcript Type= protein_coding
chr18	9708165	9862551	9708165	9862551	+	ENST00000578921.5@RAB31	ENST00000578921.5	protein_coding	9708165,9775278,9792154,9814020,9815116,9845582,9859228	9708444,9775357,9792235,9814091,9815222,9845691,9862551	Gene ID= ENSG00000168461.12 TPM= 57.36 Transcript Type= protein_coding
chr18	9914002	9960021	9914002	9960021	+	ENST00000400000.6@VAPA	ENST00000400000.6	protein_coding	9914002,9931810,9936110,9936986,9950395,9954053	9914335,9931962,9936213,9937066,9950568,9960021	Gene ID= ENSG00000101558.13 TPM= 8.5 Transcript Type= protein_coding
chr18	9937220	9940150	9937220	9940150	-	transcript344.chr18.nnic@NA	transcript344.chr18.nnic	NA	9937220	9940150	Gene ID= novel_gene_chr18_345 TPM= 6.37 Transcript Type= NA
chr18	9945352	9948462	9945352	9948462	-	transcript346.chr18.nnic@NA	transcript346.chr18.nnic	NA	9945352	9948462	Gene ID= novel_gene_chr18_347 TPM= 24.43 Transcript Type= NA
chr18	10525958	10546364	10525958	10546364	+	transcript356.chr18.nic@NAPG	transcript356.chr18.nic	protein_coding	10525958,10530770,10532711,10533536,10534466,10539762,10539988,10540329,10546326	10526158,10530837,10532795,10533553,10534496,10539871,10540054,10540399,10546364	Gene ID= ENSG00000134265.12 TPM= 4.25 Transcript Type= NA
chr18	10526034	10552760	10526034	10552760	+	ENST00000322897.10@NAPG	ENST00000322897.10	protein_coding	10526034,10530770,10532711,10533536,10534466,10539762,10539988,10540329,10546326,10548299,10548967,10550077	10526158,10530837,10532795,10533553,10534496,10539871,10540054,10540399,10546404,10548378,10549096,10552760	Gene ID= ENSG00000134265.12 TPM= 83.91 Transcript Type= protein_coding
chr18	10526028	10528216	10526028	10528216	+	transcript359.chr18.nnic@NA	transcript359.chr18.nnic	NA	10526028	10528216	Gene ID= novel_gene_chr18_360 TPM= 3.19 Transcript Type= NA
chr18	11851396	11854449	11851396	11854449	+	ENST00000526991.2@CHMP1B	ENST00000526991.2	protein_coding	11851396	11854449	Gene ID= ENSG00000255112.2 TPM= 8.5 Transcript Type= protein_coding
chr18	11882622	11909223	11882622	11909223	-	ENST00000588072.5@MPPE1	ENST00000588072.5	protein_coding	11908201,11906203,11896984,11893468,11889387,11888669,11886917,11886713,11886499,11885676,11882622	11909223,11906309,11897356,11893576,11889490,11888743,11887025,11886778,11886621,11885816,11884627	Gene ID= ENSG00000154889.16 TPM= 8.5 Transcript Type= protein_coding
chr18	11884053	11908341	11884053	11908341	-	transcript377.chr18.nic@MPPE1	transcript377.chr18.nic	protein_coding	11908201,11906203,11896984,11893468,11889387,11888669,11886917,11886499,11885676,11884879,11884053	11908341,11906309,11897356,11893576,11889490,11888743,11887025,11886621,11885816,11885043,11884627	Gene ID= ENSG00000154889.16 TPM= 2.12 Transcript Type= NA
chr18	11884053	11908347	11884053	11908347	-	transcript382.chr18.nic@MPPE1	transcript382.chr18.nic	protein_coding	11908201,11896984,11893468,11889387,11888669,11886917,11886713,11886499,11885676,11884053	11908347,11897356,11893576,11889490,11888743,11887025,11886778,11886621,11885816,11884627	Gene ID= ENSG00000154889.16 TPM= 2.12 Transcript Type= NA
chr18	11884068	11908330	11884068	11908330	-	ENST00000344987.11@MPPE1	ENST00000344987.11	protein_coding	11908201,11906203,11896984,11893468,11889387,11888669,11886917,11886499,11885676,11884068	11908330,11906309,11897356,11893576,11889490,11888743,11887025,11886621,11885816,11884627	Gene ID= ENSG00000154889.16 TPM= 7.44 Transcript Type= protein_coding
chr18	11897186	11908301	11897186	11908301	-	ENST00000593001.5@MPPE1	ENST00000593001.5	protein_coding	11908201,11906203,11897186	11908301,11906309,11897356	Gene ID= ENSG00000154889.16 TPM= 2.12 Transcript Type= non_stop_decay
chr18	11908712	11909223	11908712	11909223	+	ENST00000609611.1@AP001269.4	ENST00000609611.1	antisense_RNA	11908712	11909223	Gene ID= ENSG00000273141.1 TPM= 7.44 Transcript Type= antisense_RNA
chr18	11981447	12030875	11981447	12030875	+	transcript391.chr18.nic@IMPA2	transcript391.chr18.nic	protein_coding	11981447,11999054,12008333,12009883,12012170,12014265,12028043,12028842,12030343	11981765,11999187,12008591,12009987,12012215,12014373,12028151,12028993,12030875	Gene ID= ENSG00000141401.11 TPM= 4.25 Transcript Type= NA
chr18	11981428	12030883	11981428	12030883	+	ENST00000269159.7@IMPA2	ENST00000269159.7	protein_coding	11981428,11999054,12009883,12012170,12014265,12028043,12028842,12030343	11981765,11999187,12009987,12012215,12014373,12028151,12028993,12030883	Gene ID= ENSG00000141401.11 TPM= 48.86 Transcript Type= protein_coding
chr18	11981465	12030868	11981465	12030868	+	ENST00000590107.5@IMPA2	ENST00000590107.5	protein_coding	11981465,11999054,12009883,12012170,12014265,12028043,12028842,12030343	11981765,11999187,12009987,12012349,12014373,12028151,12028993,12030868	Gene ID= ENSG00000141401.11 TPM= 2.12 Transcript Type= nonsense_mediated_decay
chr18	12305612	12308133	12305612	12308133	-	transcript434.chr18.nnic@NA	transcript434.chr18.nnic	NA	12305612	12308133	Gene ID= novel_gene_chr18_435 TPM= 5.31 Transcript Type= NA
chr18	12308059	12326619	12308059	12326619	+	ENST00000317702.9@TUBB6	ENST00000317702.9	protein_coding	12308059,12308687,12310943,12325067	12308349,12308795,12311053,12326619	Gene ID= ENSG00000176014.12 TPM= 83.38 Transcript Type= protein_coding
chr18	12308234	12329826	12308234	12329826	+	ENST00000591909.5@TUBB6	ENST00000591909.5	protein_coding	12308234,12308687,12310943,12329146	12308349,12308795,12311053,12329826	Gene ID= ENSG00000176014.12 TPM= 11.68 Transcript Type= protein_coding
chr18	12308241	12326563	12308241	12326563	+	ENST00000417736.2@TUBB6	ENST00000417736.2	protein_coding	12308241,12310943,12325067	12308795,12311053,12326563	Gene ID= ENSG00000176014.12 TPM= 96.13 Transcript Type= retained_intron
chr18	12328944	12377314	12328944	12377314	-	ENST00000269143.7@AFG3L2	ENST00000269143.7	protein_coding	12376969,12371592,12370849,12367276,12366965,12363782,12359927,12358670,12356694,12353005,12351306,12351085,12348273,12344132,12340201,12337341,12328944	12377314,12371691,12370926,12367382,12367117,12363856,12360051,12358943,12356831,12353158,12351413,12351210,12348383,12344247,12340401,12337535,12329783	Gene ID= ENSG00000141385.9 TPM= 250.67 Transcript Type= protein_coding
chr18	12446513	12658125	12446513	12658125	-	transcript437.chr18.nic@SPIRE1	transcript437.chr18.nic	protein_coding	12657530,12635062,12546674,12535476,12512454,12506477,12496016,12493072,12479699,12464868,12463351,12459755,12454346,12453068,12452485,12452255,12446513	12658125,12635096,12546904,12535601,12512531,12506641,12496102,12493201,12479871,12464958,12463493,12459928,12454483,12453138,12452512,12452391,12449896	Gene ID= ENSG00000134278.15 TPM= 8.15 Transcript Type= NA
chr18	12446512	12658134	12446512	12658134	-	ENST00000409402.8@SPIRE1	ENST00000409402.8	protein_coding	12657530,12635062,12546674,12535476,12512454,12506477,12496016,12493072,12485959,12479699,12464868,12463351,12454346,12453068,12452485,12452255,12446512	12658134,12635096,12546904,12535601,12512531,12506641,12496102,12493201,12486000,12479871,12464958,12463493,12454483,12453138,12452512,12452391,12449896	Gene ID= ENSG00000134278.15 TPM= 9.74 Transcript Type= protein_coding
chr18	12446513	12658045	12446513	12658045	-	ENST00000410092.7@SPIRE1	ENST00000410092.7	protein_coding	12657530,12635062,12546674,12535476,12512454,12506477,12496016,12493072,12479699,12464868,12463351,12454346,12453068,12452485,12452255,12446513	12658045,12635096,12546904,12535601,12512531,12506641,12496102,12493201,12479871,12464958,12463493,12454483,12453138,12452512,12452391,12449896	Gene ID= ENSG00000134278.15 TPM= 42.67 Transcript Type= protein_coding
chr18	12702426	12725740	12702426	12725740	+	ENST00000317615.10@PSMG2	ENST00000317615.10	protein_coding	12702426,12706550,12712702,12718517,12720510,12724499,12725439	12703164,12706721,12712760,12718635,12720683,12724619,12725740	Gene ID= ENSG00000128789.20 TPM= 62.67 Transcript Type= protein_coding
chr18	12672632	12702774	12672632	12702774	-	ENST00000262127.6@CEP76	ENST00000262127.6	protein_coding	12702486,12700958,12699830,12698979,12697223,12695254,12691359,12686262,12680662,12678109,12674536,12672632	12702774,12701113,12699905,12699203,12697408,12695351,12691487,12686450,12680828,12678442,12674753,12673503	Gene ID= ENSG00000101624.10 TPM= 1.06 Transcript Type= protein_coding
chr18	12785478	12884338	12785478	12884338	-	ENST00000327283.7@PTPN2	ENST00000327283.7	protein_coding	12884073,12859164,12836791,12830943,12825810,12817156,12814203,12801970,12794384,12785478	12884338,12859254,12836891,12831041,12825944,12817365,12814355,12802151,12794485,12785844	Gene ID= ENSG00000175354.18 TPM= 12.75 Transcript Type= protein_coding
chr18	12785478	12787741	12785478	12787741	-	ENST00000589444.1@PTPN2	ENST00000589444.1	protein_coding	12785478	12787741	Gene ID= ENSG00000175354.18 TPM= 1.06 Transcript Type= retained_intron
chr18	12792153	12884235	12792153	12884235	-	ENST00000309660.9@PTPN2	ENST00000309660.9	protein_coding	12884073,12859164,12836791,12830943,12825810,12817156,12814203,12801970,12792153	12884235,12859254,12836891,12831041,12825944,12817365,12814355,12802151,12794485	Gene ID= ENSG00000175354.18 TPM= 1.06 Transcript Type= protein_coding
chr18	12948021	12987536	12948021	12987536	+	ENST00000399892.6@SEH1L	ENST00000399892.6	protein_coding	12948021,12951855,12955463,12963160,12971153,12978752,12982518,12984040,12986862	12948232,12951905,12955609,12963371,12971251,12978892,12982675,12984190,12987536	Gene ID= ENSG00000085415.15 TPM= 34.52 Transcript Type= protein_coding
chr18	12947995	12987536	12947995	12987536	+	ENST00000262124.15@SEH1L	ENST00000262124.15	protein_coding	12947995,12951855,12955463,12963160,12971153,12978752,12982518,12984040,12985240	12948232,12951905,12955609,12963371,12971251,12978892,12982675,12984190,12987536	Gene ID= ENSG00000085415.15 TPM= 5.84 Transcript Type= protein_coding
chr18	13217382	13645777	13217382	13645777	+	transcript487.chr18.nic@LDLRAD4	transcript487.chr18.nic	protein_coding	13217382,13278105,13387341,13438244,13621117,13643359,13645127	13218094,13278188,13387762,13438384,13621271,13643412,13645777	Gene ID= ENSG00000168675.18 TPM= 7.44 Transcript Type= NA
chr18	13218750	13645777	13218750	13645777	+	transcript490.chr18.nic@LDLRAD4	transcript490.chr18.nic	protein_coding	13218750,13278105,13387341,13438244,13621117,13643359,13645127	13218988,13278188,13387762,13438384,13621271,13643412,13645777	Gene ID= ENSG00000168675.18 TPM= 4.25 Transcript Type= NA
chr18	13381078	13382233	13381078	13382233	-	transcript495.chr18.nnic@NA	transcript495.chr18.nnic	NA	13381078	13382233	Gene ID= novel_gene_chr18_496 TPM= 2.12 Transcript Type= NA
chr18	13649178	13652505	13649178	13652505	+	transcript497.chr18.nnic@NA	transcript497.chr18.nnic	NA	13649178	13652505	Gene ID= novel_gene_chr18_498 TPM= 2.12 Transcript Type= NA
chr18	13663351	13726592	13663351	13726592	-	ENST00000402563.5@FAM210A	ENST00000402563.5	protein_coding	13726329,13681605,13671862,13663351	13726592,13682105,13671973,13666713	Gene ID= ENSG00000177150.12 TPM= 10.62 Transcript Type= protein_coding
chr18	13726651	13746280	13726651	13746280	+	transcript520.chr18.nic@RNMT	transcript520.chr18.nic	protein_coding	13726651,13731476,13734464,13737010,13740167,13741510,13742488,13746220	13726729,13731934,13734599,13737135,13740279,13741691,13742652,13746280	Gene ID= ENSG00000101654.17 TPM= 2.12 Transcript Type= NA
chr18	13726660	13760285	13726660	13760285	+	ENST00000543302.6@RNMT	ENST00000543302.6	protein_coding	13726660,13731476,13734464,13737010,13740167,13741510,13742488,13746220,13752326,13754114,13759942	13726729,13731934,13734599,13737135,13740279,13741691,13742652,13746337,13752427,13754147,13760285	Gene ID= ENSG00000101654.17 TPM= 5.31 Transcript Type= protein_coding
chr18	13732744	13734178	13732744	13734178	-	transcript525.chr18.nnic@NA	transcript525.chr18.nnic	NA	13732744	13734178	Gene ID= novel_gene_chr18_526 TPM= 2.12 Transcript Type= NA
chr18	20967869	21111800	20967869	21111800	-	transcript532.chr18.nic@ROCK1	transcript532.chr18.nic	protein_coding	21110818,21070532,21049780,21049092,21045292,21044102,21042565,21042097,21039472,21028776,21023620,21020151,21015431,21008059,21006699,21006351,20992831,20991176,20986950,20984351,20982763,20979910,20970348,20969115,20968772,20967869	21111800,21070613,21049880,21049229,21045467,21044186,21042709,21042235,21039563,21028935,21023680,21020239,21015479,21008194,21006790,21006597,20992937,20991326,20987110,20984535,20982832,20980004,20970513,20969208,20968860,20967940	Gene ID= ENSG00000067900.7 TPM= 5.31 Transcript Type= NA
chr18	21084193	21085355	21084193	21085355	+	transcript548.chr18.nnic@NA	transcript548.chr18.nnic	NA	21084193	21085355	Gene ID= novel_gene_chr18_549 TPM= 5.31 Transcript Type= NA
chr18	21521237	21522014	21521237	21522014	+	transcript553.chr18.nnic@NA	transcript553.chr18.nnic	NA	21521237	21522014	Gene ID= novel_gene_chr18_554 TPM= 2.12 Transcript Type= NA
chr18	21529303	21600744	21529303	21600744	-	transcript558.chr18.nnic@ESCO1	transcript558.chr18.nnic	protein_coding	21600623,21584310,21575672,21573314,21567980,21566146,21564203,21560859,21536042,21532473,21529303	21600744,21584440,21575777,21575430,21568094,21566206,21564317,21560990,21536185,21532660,21530490	Gene ID= ENSG00000141446.10 TPM= 2.12 Transcript Type= NA
chr18	21529281	21600736	21529281	21600736	-	ENST00000269214.9@ESCO1	ENST00000269214.9	protein_coding	21600623,21584310,21575672,21573314,21567980,21566146,21564203,21560859,21539920,21536042,21532473,21529281	21600736,21584440,21575777,21575430,21568094,21566206,21564317,21560990,21540009,21536185,21532660,21530490	Gene ID= ENSG00000141446.10 TPM= 4.25 Transcript Type= protein_coding
chr18	21612267	21633524	21612267	21633524	+	ENST00000300413.9@SNRPD1	ENST00000300413.9	protein_coding	21612267,21622725,21623748,21629062	21612443,21622801,21623939,21633524	Gene ID= ENSG00000167088.10 TPM= 35.05 Transcript Type= protein_coding
chr18	21650897	21704805	21650897	21704805	-	ENST00000289119.6@ABHD3	ENST00000289119.6	protein_coding	21704504,21703584,21702316,21683920,21664118,21659170,21657104,21656861,21650897	21704805,21703747,21702498,21683965,21664230,21659343,21657152,21657026,21651763	Gene ID= ENSG00000158201.9 TPM= 3.19 Transcript Type= protein_coding
chr18	21740799	21743293	21740799	21743293	+	transcript581.chr18.nnic@NA	transcript581.chr18.nnic	NA	21740799	21743293	Gene ID= novel_gene_chr18_582 TPM= 3.19 Transcript Type= NA
chr18	21829087	21831410	21829087	21831410	-	ENST00000581613.1@MIR133A1HG	ENST00000581613.1	antisense_RNA	21831322,21830620,21829087	21831410,21830740,21829452	Gene ID= ENSG00000265142.8 TPM= 1.06 Transcript Type= antisense_RNA
chr18	21826039	21827092	21826039	21827092	-	transcript583.chr18.nnic@NA	transcript583.chr18.nnic	NA	21826039	21827092	Gene ID= novel_gene_chr18_584 TPM= 2.12 Transcript Type= NA
chr18	21829429	21831405	21829429	21831405	-	transcript585.chr18.nnic@NA	transcript585.chr18.nnic	NA	21829429	21831405	Gene ID= novel_gene_chr18_586 TPM= 9.56 Transcript Type= NA
chr18	22166914	22169091	22166914	22169091	-	transcript602.chr18.nic@GATA6-AS1	transcript602.chr18.nic	lincRNA	22168667,22168311,22168044,22167604,22166914	22169091,22168383,22168162,22167803,22167308	Gene ID= ENSG00000266010.1 TPM= 8.58 Transcript Type= NA
chr18	22166914	22170191	22166914	22170191	-	transcript603.chr18.nnic@GATA6-AS1	transcript603.chr18.nnic	lincRNA	22169409,22168311,22168044,22167604,22166914	22170191,22168383,22168162,22167803,22167308	Gene ID= ENSG00000266010.1 TPM= 7.52 Transcript Type= NA
chr18	22166914	22169023	22166914	22169023	-	transcript608.chr18.nic@GATA6-AS1	transcript608.chr18.nic	lincRNA	22168667,22168311,22167604,22166914	22169023,22168383,22168162,22167308	Gene ID= ENSG00000266010.1 TPM= 2.74 Transcript Type= NA
chr18	22166902	22169091	22166902	22169091	-	transcript610.chr18.nic@GATA6-AS1	transcript610.chr18.nic	lincRNA	22168667,22168311,22166902	22169091,22168383,22168162	Gene ID= ENSG00000266010.1 TPM= 4.6 Transcript Type= NA
chr18	22166914	22168632	22166914	22168632	-	transcript612.chr18.nic@GATA6-AS1	transcript612.chr18.nic	lincRNA	22168311,22167604,22166914	22168632,22168162,22167308	Gene ID= ENSG00000266010.1 TPM= 2.74 Transcript Type= NA
chr18	22166902	22168480	22166902	22168480	-	transcript616.chr18.nic@GATA6-AS1	transcript616.chr18.nic	lincRNA	22168311,22166902	22168480,22168162	Gene ID= ENSG00000266010.1 TPM= 4.6 Transcript Type= NA
chr18	22170005	22201978	22170005	22201978	+	transcript593.chr18.nnic@GATA6	transcript593.chr18.nnic	protein_coding	22170005,22171108,22176955,22181453,22182757,22182940,22200656	22170357,22172279,22177121,22181578,22182844,22183043,22201978	Gene ID= ENSG00000141448.8 TPM= 8.15 Transcript Type= NA
chr18	22174816	22201978	22174816	22201978	+	transcript599.chr18.nnic@GATA6	transcript599.chr18.nnic	protein_coding	22174816,22176955,22181453,22182757,22182940,22200656	22175071,22177121,22181578,22182844,22183043,22201978	Gene ID= ENSG00000141448.8 TPM= 14.87 Transcript Type= NA
chr18	22169443	22202528	22169443	22202528	+	ENST00000269216.7@GATA6	ENST00000269216.7	protein_coding	22169443,22171108,22176955,22181453,22182757,22182940,22200656	22169682,22172279,22177121,22181578,22182844,22183043,22202528	Gene ID= ENSG00000141448.8 TPM= 26.2 Transcript Type= protein_coding
chr18	22173035	22177468	22173035	22177468	+	transcript620.chr18.nnic@NA	transcript620.chr18.nnic	NA	22173035	22177468	Gene ID= novel_gene_chr18_621 TPM= 9.56 Transcript Type= NA
chr18	22183991	22187860	22183991	22187860	+	transcript622.chr18.nnic@NA	transcript622.chr18.nnic	NA	22183991	22187860	Gene ID= novel_gene_chr18_623 TPM= 5.31 Transcript Type= NA
chr18	22347845	22349342	22347845	22349342	-	transcript630.chr18.nnic@NA	transcript630.chr18.nnic	NA	22347845	22349342	Gene ID= novel_gene_chr18_631 TPM= 3.19 Transcript Type= NA
chr18	22452867	22453005	22452867	22453005	+	transcript632.chr18.nnic@NA	transcript632.chr18.nnic	NA	22452867	22453005	Gene ID= novel_gene_chr18_633 TPM= 4.25 Transcript Type= NA
chr18	22558783	22559965	22558783	22559965	-	transcript635.chr18.nnic@NA	transcript635.chr18.nnic	NA	22558783	22559965	Gene ID= novel_gene_chr18_636 TPM= 2.12 Transcript Type= NA
chr18	22933315	23026486	22933315	23026486	+	ENST00000327155.9@RBBP8	ENST00000327155.9	protein_coding	22933315,22936754,22946444,22949618,22968806,22975153,22982218,22984886,22989221,22990937,22992748,22993721,22996374,22997620,23001586,23006363,23016828,23022129,23026143	22933564,22936960,22946486,22949713,22968918,22975219,22982393,22984990,22989318,22991049,22993639,22993847,22996462,22997734,23001729,23006432,23016924,23022270,23026486	Gene ID= ENSG00000101773.18 TPM= 4.25 Transcript Type= protein_coding
chr18	23296017	23437905	23296017	23437905	-	ENST00000383233.7@TMEM241	ENST00000383233.7	protein_coding	23437781,23430631,23421367,23399566,23384990,23377646,23373712,23371422,23370216,23368715,23365634,23356594,23352196,23309680,23296017	23437905,23430677,23421444,23399647,23385067,23377671,23373763,23371470,23370261,23368750,23365668,23356663,23352289,23309744,23298067	Gene ID= ENSG00000134490.13 TPM= 3.19 Transcript Type= protein_coding
chr18	23452823	23483140	23452823	23483140	+	ENST00000339486.7@RIOK3	ENST00000339486.7	protein_coding	23452823,23462964,23463967,23464206,23464519,23466133,23467399,23473429,23474948,23477006,23477179,23479317,23481172	23453502,23463079,23464112,23464313,23464628,23466276,23467526,23473626,23475107,23477086,23477268,23479424,23483140	Gene ID= ENSG00000101782.14 TPM= 77.54 Transcript Type= protein_coding
chr18	23453308	23481500	23453308	23481500	+	ENST00000577501.5@RIOK3	ENST00000577501.5	protein_coding	23453308,23462964,23463967,23464206,23464519,23466133,23467399,23473429,23474948,23477006,23477179,23479326,23481172	23453502,23463079,23464112,23464313,23464628,23466276,23467526,23473626,23475107,23477086,23477268,23479424,23481500	Gene ID= ENSG00000101782.14 TPM= 2.12 Transcript Type= protein_coding
chr18	23503473	23531778	23503473	23531778	+	transcript649.chr18.nic@C18orf8	transcript649.chr18.nic	protein_coding	23503473,23504371,23506970,23507985,23509193,23515856,23516320,23518890,23519069,23520202,23524130,23524429,23526637,23527795,23529179,23529635,23530028,23530229,23530511,23531625	23503720,23504447,23507054,23508041,23509279,23515996,23516423,23518979,23519174,23520313,23524174,23524482,23526765,23527901,23529298,23529712,23530132,23530297,23530612,23531778	Gene ID= ENSG00000141452.9 TPM= 2.39 Transcript Type= NA
chr18	23503473	23531778	23503473	23531778	+	transcript650.chr18.nic@C18orf8	transcript650.chr18.nic	protein_coding	23503473,23504371,23507985,23509193,23515856,23516320,23518890,23519069,23520202,23524130,23524429,23526637,23527795,23529179,23529635,23530028,23530229,23530387,23531625	23503720,23504447,23508041,23509279,23515996,23516423,23518979,23519174,23520313,23524174,23524482,23526765,23527901,23529298,23529712,23530132,23530297,23530612,23531778	Gene ID= ENSG00000141452.9 TPM= 2.92 Transcript Type= NA
chr18	23503509	23531782	23503509	23531782	+	ENST00000269221.7@C18orf8	ENST00000269221.7	protein_coding	23503509,23504371,23506970,23507985,23509193,23515856,23516320,23518890,23519069,23520202,23524130,23524429,23526637,23527795,23529179,23529635,23530028,23530229,23530387,23531625	23503720,23504447,23507054,23508041,23509279,23515996,23516423,23518979,23519174,23520313,23524174,23524482,23526765,23527901,23529298,23529712,23530132,23530297,23530612,23531782	Gene ID= ENSG00000141452.9 TPM= 17.79 Transcript Type= protein_coding
chr18	23503513	23531778	23503513	23531778	+	ENST00000589215.5@C18orf8	ENST00000589215.5	protein_coding	23503513,23504371,23507985,23509193,23515856,23516320,23518890,23519069,23520202,23524130,23524429,23526637,23527795,23529179,23529635,23530028,23530229,23530511,23531625	23503720,23504447,23508041,23509279,23515996,23516423,23518979,23519174,23520313,23524174,23524482,23526765,23527901,23529298,23529712,23530132,23530297,23530612,23531778	Gene ID= ENSG00000141452.9 TPM= 2.39 Transcript Type= nonsense_mediated_decay
chr18	23598926	23662885	23598926	23662885	-	ENST00000592179.5@ANKRD29	ENST00000592179.5	protein_coding	23662710,23649083,23646189,23638849,23634051,23629853,23619531,23617732,23612092,23598926	23662885,23649193,23646287,23638947,23634149,23629951,23619629,23617827,23612190,23601309	Gene ID= ENSG00000154065.16 TPM= 1.06 Transcript Type= protein_coding
chr18	24014420	24020288	24014420	24020288	+	ENST00000584250.1@TTC39C	ENST00000584250.1	protein_coding	24014420,24019860	24015038,24020288	Gene ID= ENSG00000168234.12 TPM= 3.19 Transcript Type= protein_coding
chr18	24024018	24026830	24024018	24026830	-	transcript673.chr18.nnic@NA	transcript673.chr18.nnic	NA	24024018	24026830	Gene ID= novel_gene_chr18_674 TPM= 2.12 Transcript Type= NA
chr18	24101459	24102942	24101459	24102942	+	transcript671.chr18.nnic@NA	transcript671.chr18.nnic	NA	24101459	24102942	Gene ID= novel_gene_chr18_672 TPM= 2.12 Transcript Type= NA
chr18	24162045	24272232	24162045	24272232	-	ENST00000399443.7@OSBPL1A	ENST00000399443.7	protein_coding	24271622,24239220,24225042,24196125,24181145,24179738,24178013,24172376,24171409,24170327,24167329,24166579,24165065,24162045	24272232,24239382,24225198,24196200,24181279,24179835,24178195,24172483,24171498,24170453,24167445,24166702,24165155,24163281	Gene ID= ENSG00000141447.17 TPM= 62.32 Transcript Type= protein_coding
chr18	24426638	24453529	24426638	24453529	+	transcript704.chr18.nic@IMPACT	transcript704.chr18.nic	protein_coding	24426638,24427919,24428869,24430322,24437955,24440496,24443049,24445393,24448093,24449819,24450779,24451361	24426792,24428047,24428921,24430384,24438040,24440618,24443152,24445466,24448183,24449953,24450867,24453529	Gene ID= ENSG00000154059.9 TPM= 2.66 Transcript Type= NA
chr18	24426616	24453535	24426616	24453535	+	ENST00000284202.8@IMPACT	ENST00000284202.8	protein_coding	24426616,24427919,24428869,24430322,24437955,24440496,24443049,24445393,24448093,24449819,24450779	24426792,24428047,24428921,24430384,24438040,24440618,24443152,24445466,24448183,24449953,24453535	Gene ID= ENSG00000154059.9 TPM= 18.59 Transcript Type= protein_coding
chr18	25062425	25352148	25062425	25352148	-	ENST00000584787.5@ZNF521	ENST00000584787.5	protein_coding	25352005,25322008,25224345,25195160,25091950,25089465,25062425	25352148,25322187,25227697,25195244,25092081,25089580,25062741	Gene ID= ENSG00000198795.10 TPM= 2.12 Transcript Type= protein_coding
chr18	25348717	25351236	25348717	25351236	+	transcript719.chr18.nnic@NA	transcript719.chr18.nnic	NA	25348717	25351236	Gene ID= novel_gene_chr18_720 TPM= 5.31 Transcript Type= NA
chr18	26016253	26090625	26016253	26090625	-	ENST00000415083.6@SS18	ENST00000415083.6	protein_coding	26090501,26087501,26078076,26057589,26052624,26039289,26038555,26035831,26035005,26032399,26016253	26090625,26087577,26078160,26057742,26052845,26039456,26038659,26035923,26035127,26032532,26018380	Gene ID= ENSG00000141380.13 TPM= 73.29 Transcript Type= protein_coding
chr18	26029393	26030835	26029393	26030835	+	transcript728.chr18.nnic@NA	transcript728.chr18.nnic	NA	26029393	26030835	Gene ID= novel_gene_chr18_729 TPM= 2.12 Transcript Type= NA
chr18	26225936	26391685	26225936	26391685	+	ENST00000269142.9@TAF4B	ENST00000269142.9	protein_coding	26225936,26265170,26267516,26274663,26274931,26281971,26285882,26292246,26293426,26315229,26321070,26327015,26335175,26357690,26389845	26227276,26265315,26267623,26274824,26275053,26282060,26286499,26292381,26293531,26315398,26321200,26327140,26335231,26357794,26391685	Gene ID= ENSG00000141384.12 TPM= 1.06 Transcript Type= protein_coding
chr18	27950966	28178025	27950966	28178025	-	transcript735.chr18.nnic@CDH2	transcript735.chr18.nnic	protein_coding	28176963,28147673,28013683,28011846,28009717,28005849,28002997,27993500,27992655,27990097,27988524,27985528,27985000,27982944,27963357,27952115,27950966	28178025,28147784,28013909,28011992,28009872,28005993,28003169,27993637,27992840,27990350,27988666,27985761,27985233,27983083,27963521,27952359,27951996	Gene ID= ENSG00000170558.8 TPM= 49.04 Transcript Type= NA
chr18	27951720	28159295	27951720	28159295	-	transcript753.chr18.nic@CDH2	transcript753.chr18.nic	protein_coding	28159149,28147673,28013683,28011846,28009717,28005849,28002997,27993500,27992655,27990097,27988524,27985528,27985000,27982944,27963357,27951720	28159295,28147784,28013909,28011992,28009872,28005993,28003169,27993637,27992840,27990350,27988666,27985761,27985233,27983083,27963521,27952359	Gene ID= ENSG00000170558.8 TPM= 27.8 Transcript Type= NA
chr18	28078679	28083174	28078679	28083174	-	transcript782.chr18.nnic@NA	transcript782.chr18.nnic	NA	28078679	28083174	Gene ID= novel_gene_chr18_783 TPM= 4.25 Transcript Type= NA
chr18	28094936	28095823	28094936	28095823	+	transcript776.chr18.nnic@NA	transcript776.chr18.nnic	NA	28094936	28095823	Gene ID= novel_gene_chr18_777 TPM= 7.44 Transcript Type= NA
chr18	28140225	28144174	28140225	28144174	+	transcript778.chr18.nnic@NA	transcript778.chr18.nnic	NA	28140225	28144174	Gene ID= novel_gene_chr18_779 TPM= 3.19 Transcript Type= NA
chr18	28175648	28178258	28175648	28178258	+	transcript780.chr18.nnic@NA	transcript780.chr18.nnic	NA	28175648	28178258	Gene ID= novel_gene_chr18_781 TPM= 4.25 Transcript Type= NA
chr18	31092138	31102423	31092138	31102423	-	transcript812.chr18.nic@DSC2	transcript812.chr18.nic	protein_coding	31101903,31093559,31092138	31102423,31093643,31092300	Gene ID= ENSG00000134755.14 TPM= 4.25 Transcript Type= NA
chr18	31129236	31227642	31129236	31227642	-	transcript796.chr18.nnic@DSC1	transcript796.chr18.nnic	protein_coding	31227438,31159445,31157371,31156043,31154774,31148498,31145611,31143657,31141999,31140042,31139748,31134572,31133891,31132568,31131594,31130793,31129236	31227642,31159529,31157573,31156162,31154929,31148642,31145777,31143791,31142184,31140301,31139890,31134784,31134130,31132689,31131842,31130838,31130711	Gene ID= ENSG00000134765.9 TPM= 2.12 Transcript Type= NA
chr18	31498043	31549008	31498043	31549008	+	ENST00000261590.12@DSG2	ENST00000261590.12	protein_coding	31498043,31518239,31519803,31520803,31521099,31522083,31524448,31524703,31530987,31535270,31536202,31538751,31541193,31542520,31545721	31498296,31518274,31519937,31520964,31521243,31522249,31524585,31524888,31531252,31535412,31536429,31538978,31541314,31542852,31549008	Gene ID= ENSG00000046604.12 TPM= 3.19 Transcript Type= protein_coding
chr18	31498180	31522612	31498180	31522612	+	transcript825.chr18.nnic@DSG2	transcript825.chr18.nnic	protein_coding	31498180,31518239,31519803,31520803,31521099,31522083,31522387	31498296,31518274,31519937,31520964,31521243,31522249,31522612	Gene ID= ENSG00000046604.12 TPM= 2.12 Transcript Type= NA
chr18	31941059	31943140	31941059	31943140	-	transcript832.chr18.nnic@NA	transcript832.chr18.nnic	NA	31941059	31943140	Gene ID= novel_gene_chr18_833 TPM= 2.12 Transcript Type= NA
chr18	32018372	32073213	32018372	32073213	+	ENST00000217740.3@RNF125	ENST00000217740.3	protein_coding	32018372,32037116,32042179,32045642,32065902,32068298	32019027,32037269,32042273,32045732,32066009,32073213	Gene ID= ENSG00000101695.8 TPM= 1.06 Transcript Type= protein_coding
chr18	32091855	32131561	32091855	32131561	+	ENST00000261593.7@RNF138	ENST00000261593.7	protein_coding	32091855,32092700,32111754,32113745,32123518,32124734,32126693,32129119	32092235,32092886,32111919,32113860,32123574,32124845,32126800,32131561	Gene ID= ENSG00000134758.13 TPM= 5.31 Transcript Type= protein_coding
chr18	32092688	32130715	32092688	32130715	+	transcript842.chr18.nic@RNF138	transcript842.chr18.nic	protein_coding	32092688,32111754,32113745,32123518,32124734,32126693,32129119	32092886,32111919,32113860,32123574,32124845,32126800,32130715	Gene ID= ENSG00000134758.13 TPM= 3.19 Transcript Type= NA
chr18	32092690	32130715	32092690	32130715	+	ENST00000257190.9@RNF138	ENST00000257190.9	protein_coding	32092690,32123518,32124734,32126693,32129119	32092886,32123574,32124845,32126800,32130715	Gene ID= ENSG00000134758.13 TPM= 1.06 Transcript Type= protein_coding
chr18	34490404	34494031	34490404	34494031	-	transcript918.chr18.nnic@NA	transcript918.chr18.nnic	NA	34490404	34494031	Gene ID= novel_gene_chr18_919 TPM= 3.19 Transcript Type= NA
chr18	34593324	34867335	34593324	34867335	+	transcript869.chr18.nic@DTNA	transcript869.chr18.nic	protein_coding	34593324,34679468,34755976,34765961,34794037,34806219,34811959,34815909,34818164,34820791,34827593,34838094,34838745,34848296,34851831,34858285,34863966,34866111	34593538,34679592,34756043,34766041,34794250,34806304,34812113,34816014,34818330,34820915,34827676,34838171,34838837,34848383,34851928,34858398,34864062,34867335	Gene ID= ENSG00000134769.21 TPM= 7.54 Transcript Type= NA
chr18	34493315	34867335	34493315	34867335	+	transcript879.chr18.nic@DTNA	transcript879.chr18.nic	protein_coding	34493315,34679468,34755976,34765961,34794037,34806219,34811959,34815909,34818164,34820791,34827593,34848296,34851831,34858285,34863966,34866111	34493514,34679592,34756043,34766041,34794250,34806304,34812113,34816014,34818330,34820915,34827676,34848383,34851928,34858398,34864062,34867335	Gene ID= ENSG00000134769.21 TPM= 8.78 Transcript Type= NA
chr18	34593324	34867335	34593324	34867335	+	transcript885.chr18.nic@DTNA	transcript885.chr18.nic	protein_coding	34593324,34679468,34755976,34765961,34794037,34806219,34811959,34815909,34818164,34820791,34827593,34848296,34851831,34858285,34863966,34866111	34593538,34679592,34756043,34766041,34794250,34806304,34812113,34816014,34818330,34820915,34827676,34848383,34851928,34858398,34864062,34867335	Gene ID= ENSG00000134769.21 TPM= 16.22 Transcript Type= NA
chr18	34493672	34829328	34493672	34829328	+	transcript902.chr18.nic@DTNA	transcript902.chr18.nic	protein_coding	34493672,34679468,34755976,34765961,34794037,34806219,34811959,34815909,34818164,34820791,34827593,34829041	34494021,34679592,34756043,34766041,34794250,34806304,34812113,34816014,34818330,34820915,34827676,34829328	Gene ID= ENSG00000134769.21 TPM= 27.62 Transcript Type= NA
chr18	34710261	34829328	34710261	34829328	+	transcript908.chr18.nic@DTNA	transcript908.chr18.nic	protein_coding	34710261,34755976,34765961,34794037,34806219,34811959,34815909,34818164,34820791,34827593,34829041	34710445,34756043,34766041,34794250,34806304,34812113,34816014,34818330,34820915,34827676,34829328	Gene ID= ENSG00000134769.21 TPM= 6.37 Transcript Type= NA
chr18	34493317	34829328	34493317	34829328	+	ENST00000315456.10@DTNA	ENST00000315456.10	protein_coding	34493317,34679468,34755976,34765961,34794037,34806219,34811959,34815909,34818164,34820791,34825267,34827593,34829041	34493514,34679592,34756043,34766041,34794250,34806304,34812113,34816014,34818330,34820915,34825275,34827676,34829328	Gene ID= ENSG00000134769.21 TPM= 22.31 Transcript Type= protein_coding
chr18	34593358	34829328	34593358	34829328	+	ENST00000554864.7@DTNA	ENST00000554864.7	protein_coding	34593358,34679468,34755976,34765961,34794037,34806219,34811959,34815909,34818164,34820791,34827593,34829041	34593538,34679592,34756043,34766041,34794250,34806304,34812113,34816014,34818330,34820915,34827676,34829328	Gene ID= ENSG00000134769.21 TPM= 37.18 Transcript Type= protein_coding
chr18	34498378	34502769	34498378	34502769	-	transcript922.chr18.nnic@NA	transcript922.chr18.nnic	NA	34498378	34502769	Gene ID= novel_gene_chr18_923 TPM= 3.19 Transcript Type= NA
chr18	34769727	34771814	34769727	34771814	-	transcript916.chr18.nnic@NA	transcript916.chr18.nnic	NA	34769727	34771814	Gene ID= novel_gene_chr18_917 TPM= 6.37 Transcript Type= NA
chr18	34854365	34857171	34854365	34857171	+	transcript914.chr18.nnic@NA	transcript914.chr18.nnic	NA	34854365	34857171	Gene ID= novel_gene_chr18_915 TPM= 3.19 Transcript Type= NA
chr18	34877961	34879661	34877961	34879661	-	transcript920.chr18.nnic@NA	transcript920.chr18.nnic	NA	34877961	34879661	Gene ID= novel_gene_chr18_921 TPM= 2.12 Transcript Type= NA
chr18	34976928	35143466	34976928	35143466	+	ENST00000413393.5@MAPRE2	ENST00000413393.5	protein_coding	34976928,35005492,35070195,35097446,35101946,35126948,35132032,35140295	34977079,35005553,35070322,35097591,35102159,35127087,35132190,35143466	Gene ID= ENSG00000166974.12 TPM= 30.98 Transcript Type= protein_coding
chr18	35041360	35143470	35041360	35143470	+	ENST00000300249.9@MAPRE2	ENST00000300249.9	protein_coding	35041360,35070195,35097446,35101946,35126948,35132032,35140295	35041661,35070322,35097591,35102159,35127087,35132190,35143470	Gene ID= ENSG00000166974.12 TPM= 187.65 Transcript Type= protein_coding
chr18	35041404	35143470	35041404	35143470	+	ENST00000538170.6@MAPRE2	ENST00000538170.6	protein_coding	35041404,35097446,35101946,35126948,35132032,35140295	35041661,35097591,35102159,35127087,35132190,35143470	Gene ID= ENSG00000166974.12 TPM= 25.67 Transcript Type= protein_coding
chr18	35112186	35115145	35112186	35115145	-	transcript939.chr18.nnic@NA	transcript939.chr18.nnic	NA	35112186	35115145	Gene ID= novel_gene_chr18_940 TPM= 2.12 Transcript Type= NA
chr18	35241037	35244100	35241037	35244100	+	ENST00000591206.5@ZNF397	ENST00000591206.5	protein_coding	35241037,35242391,35243152	35241109,35242884,35244100	Gene ID= ENSG00000186812.12 TPM= 5.31 Transcript Type= protein_coding
chr18	35251066	35290208	35251066	35290208	-	ENST00000333206.9@ZSCAN30	ENST00000333206.9	protein_coding	35290084,35263945,35263513,35251066	35290208,35264455,35263657,35254381	Gene ID= ENSG00000186814.13 TPM= 6.37 Transcript Type= protein_coding
chr18	35290282	35310766	35290282	35310766	+	ENST00000399070.3@ZNF271P	ENST00000399070.3	transcribed_unitary_pseudogene	35290282,35291010,35305976	35290391,35291232,35310766	Gene ID= ENSG00000257267.3 TPM= 5.31 Transcript Type= processed_transcript
chr18	35290336	35308110	35290336	35308110	+	ENST00000638208.1@ZNF271P	ENST00000638208.1	transcribed_unitary_pseudogene	35290336,35305976	35290391,35308110	Gene ID= ENSG00000257267.3 TPM= 10.62 Transcript Type= processed_transcript
chr18	35332212	35344456	35332212	35344456	-	ENST00000261332.10@ZNF24	ENST00000261332.10	protein_coding	35344360,35340231,35339829,35332212	35344456,35340733,35339976,35337770	Gene ID= ENSG00000172466.15 TPM= 3.72 Transcript Type= protein_coding
chr18	35332227	35344456	35332227	35344456	-	ENST00000399061.3@ZNF24	ENST00000399061.3	protein_coding	35344370,35340231,35339829,35332227	35344456,35340733,35339976,35337770	Gene ID= ENSG00000172466.15 TPM= 4.78 Transcript Type= protein_coding
chr18	35468333	35497991	35468333	35497991	-	ENST00000334598.11@INO80C	ENST00000334598.11	protein_coding	35497719,35480453,35479300,35478282,35468333	35497991,35480563,35479411,35478349,35468742	Gene ID= ENSG00000153391.15 TPM= 12.75 Transcript Type= protein_coding
chr18	35580885	35709780	35580885	35709780	+	transcript981.chr18.nnic@GALNT1	transcript981.chr18.nnic	protein_coding	35580885,35654659,35663628,35677591,35683391,35687016,35689173,35691012,35692181,35702897,35703509,35709624	35581305,35654801,35663802,35677757,35683598,35687186,35689290,35691192,35692320,35702995,35703643,35709780	Gene ID= ENSG00000141429.13 TPM= 2.47 Transcript Type= NA
chr18	35581078	35710991	35581078	35710991	+	transcript985.chr18.nic@GALNT1	transcript985.chr18.nic	protein_coding	35581078,35654560,35663628,35677591,35683391,35687016,35689173,35691012,35692181,35702897,35703509,35709624	35581862,35654801,35663802,35677757,35683598,35687186,35689290,35691192,35692320,35702995,35703643,35710991	Gene ID= ENSG00000141429.13 TPM= 17.53 Transcript Type= NA
chr18	35581109	35710991	35581109	35710991	+	transcript988.chr18.nnic@GALNT1	transcript988.chr18.nnic	protein_coding	35581109,35654658,35663628,35677591,35683391,35687016,35689173,35691012,35692181,35702897,35703509,35709624	35581862,35654801,35663802,35677757,35683598,35687186,35689290,35691192,35692320,35702995,35703643,35710991	Gene ID= ENSG00000141429.13 TPM= 4.78 Transcript Type= NA
chr18	35581078	35709780	35581078	35709780	+	transcript989.chr18.nnic@GALNT1	transcript989.chr18.nnic	protein_coding	35581078,35654560,35663628,35683391,35687016,35689173,35691012,35692181,35702897,35703509,35709624	35581862,35654801,35663802,35683598,35687186,35689290,35691192,35692320,35702995,35703643,35709780	Gene ID= ENSG00000141429.13 TPM= 2.12 Transcript Type= NA
chr18	35972083	35979278	35972083	35979278	+	ENST00000592875.5@C18orf21	ENST00000592875.5	protein_coding	35972083,35972885,35974896,35977410,35978835	35972805,35972907,35975095,35977600,35979278	Gene ID= ENSG00000141428.16 TPM= 3.19 Transcript Type= protein_coding
chr18	35972625	35979286	35972625	35979286	+	ENST00000610527.4@C18orf21	ENST00000610527.4	protein_coding	35972625,35974896,35977410,35978835	35972840,35975095,35977600,35979286	Gene ID= ENSG00000141428.16 TPM= 2.12 Transcript Type= protein_coding
chr18	35980139	35981882	35980139	35981882	-	transcript999.chr18.nnic@NA	transcript999.chr18.nnic	NA	35980139	35981882	Gene ID= novel_gene_chr18_1000 TPM= 8.5 Transcript Type= NA
chr18	35989824	36067576	35989824	36067576	-	ENST00000399022.8@RPRD1A	ENST00000399022.8	protein_coding	36067254,36033708,36030991,36030808,36027184,36026900,35989824	36067576,36033837,36031097,36030905,36027310,36027075,35993300	Gene ID= ENSG00000141425.17 TPM= 40.36 Transcript Type= protein_coding
chr18	36027399	36029642	36027399	36029642	+	transcript1009.chr18.nnic@NA	transcript1009.chr18.nnic	NA	36027399	36029642	Gene ID= novel_gene_chr18_1010 TPM= 2.12 Transcript Type= NA
chr18	36108532	36129318	36108532	36129318	-	ENST00000269187.9@SLC39A6	ENST00000269187.9	protein_coding	36129114,36126219,36124520,36123495,36122052,36116674,36114097,36112501,36111059,36108532	36129318,36127016,36124700,36123664,36122270,36116779,36114474,36112581,36111249,36109745	Gene ID= ENSG00000141424.12 TPM= 9.56 Transcript Type= protein_coding
chr18	36109148	36129381	36109148	36129381	-	ENST00000590986.5@SLC39A6	ENST00000590986.5	protein_coding	36129101,36126219,36124520,36123495,36122052,36116674,36114097,36112501,36111059,36109148	36129381,36127016,36124700,36123664,36122270,36116779,36114474,36112581,36111249,36109745	Gene ID= ENSG00000141424.12 TPM= 1.06 Transcript Type= protein_coding
chr18	36129871	36180556	36129871	36180556	+	ENST00000358232.10@ELP2	ENST00000358232.10	protein_coding	36129871,36133238,36136307,36138270,36138795,36141137,36142281,36142826,36144939,36145948,36146250,36154850,36156466,36158835,36159735,36159958,36160932,36164475,36167101,36170063,36171047,36174485	36130071,36133316,36136377,36138426,36138872,36141201,36142347,36142966,36145034,36146048,36146381,36154999,36156654,36158904,36159830,36160015,36161004,36164667,36167222,36170196,36171160,36180556	Gene ID= ENSG00000134759.13 TPM= 22.31 Transcript Type= protein_coding
chr18	36129890	36174653	36129890	36174653	+	transcript1026.chr18.nnic@ELP2	transcript1026.chr18.nnic	protein_coding	36129890,36133238,36136307,36138270,36138795,36141137,36142281,36142826,36144939,36145948,36146250,36154850,36156466,36158835,36159735,36159958,36160932,36164475,36167101,36171047,36174485	36130071,36133316,36136377,36138426,36138872,36141201,36142347,36142966,36145034,36146048,36146381,36154999,36156654,36158904,36159830,36160015,36161004,36164667,36167222,36171160,36174653	Gene ID= ENSG00000134759.13 TPM= 2.12 Transcript Type= NA
chr18	36129890	36165289	36129890	36165289	+	transcript1032.chr18.nic@ELP2	transcript1032.chr18.nic	protein_coding	36129890,36133238,36136307,36138270,36138795,36141137,36142281,36142826,36144939,36145948,36146250,36154850,36156466,36158835,36159735,36159958,36160932,36164475	36130071,36133316,36136377,36138426,36138872,36141201,36142347,36142966,36145034,36146048,36146381,36154999,36156654,36158904,36159830,36160015,36161004,36165289	Gene ID= ENSG00000134759.13 TPM= 3.19 Transcript Type= NA
chr18	36129898	36174651	36129898	36174651	+	ENST00000442325.6@ELP2	ENST00000442325.6	protein_coding	36129898,36133238,36136307,36138270,36138795,36139419,36141137,36142281,36142826,36144939,36145948,36146250,36154850,36156466,36158835,36159735,36159958,36160932,36164475,36167101,36170063,36171047,36174485	36130071,36133316,36136377,36138426,36138872,36139613,36141201,36142347,36142966,36145034,36146048,36146381,36154999,36156654,36158904,36159830,36160015,36161004,36164667,36167222,36170196,36171160,36174651	Gene ID= ENSG00000134759.13 TPM= 5.31 Transcript Type= protein_coding
chr18	36129891	36174648	36129891	36174648	+	ENST00000351393.10@ELP2	ENST00000351393.10	protein_coding	36129891,36133238,36136307,36138270,36141137,36142281,36142826,36144939,36145948,36146250,36154850,36156466,36158835,36159735,36159958,36160932,36164475,36167101,36170063,36171047,36174485	36130071,36133316,36136377,36138426,36141201,36142347,36142966,36145034,36146048,36146381,36154999,36156654,36158904,36159830,36160015,36161004,36164667,36167222,36170196,36171160,36174648	Gene ID= ENSG00000134759.13 TPM= 2.12 Transcript Type= protein_coding
chr18	36297707	36780055	36297707	36780055	+	transcript1037.chr18.nnic@FHOD3	transcript1037.chr18.nnic	protein_coding	36297707,36355539,36372680,36501932,36512438,36576451,36594787,36602674,36611952,36625511,36649316,36652570,36658075,36681436,36687128,36693209,36709095,36717832,36730646,36740656,36742737,36744032,36746945,36755119,36759118,36760608,36769265,36779448	36298000,36355645,36372744,36501999,36512543,36576545,36594898,36602768,36612095,36625749,36649405,36652929,36658188,36681570,36687178,36693423,36709391,36718715,36730804,36740838,36742856,36744193,36747135,36755311,36759141,36760782,36769426,36780055	Gene ID= ENSG00000134775.15 TPM= 70.72 Transcript Type= NA
chr18	36297699	36651762	36297699	36651762	+	transcript1049.chr18.nic@FHOD3	transcript1049.chr18.nic	protein_coding	36297699,36355539,36372680,36501932,36512438,36576451,36594787,36602674,36611952,36625511,36649316	36298000,36355645,36372744,36501999,36512543,36576545,36594898,36602768,36612095,36625749,36651762	Gene ID= ENSG00000134775.15 TPM= 3.45 Transcript Type= NA
chr18	36298761	36302396	36298761	36302396	-	transcript1075.chr18.nnic@NA	transcript1075.chr18.nnic	NA	36298761	36302396	Gene ID= novel_gene_chr18_1076 TPM= 14.87 Transcript Type= NA
chr18	36380342	36384583	36380342	36384583	+	transcript1061.chr18.nnic@NA	transcript1061.chr18.nnic	NA	36380342	36384583	Gene ID= novel_gene_chr18_1062 TPM= 4.25 Transcript Type= NA
chr18	36435103	36438555	36435103	36438555	-	transcript1077.chr18.nnic@NA	transcript1077.chr18.nnic	NA	36435103	36438555	Gene ID= novel_gene_chr18_1078 TPM= 2.12 Transcript Type= NA
chr18	36446412	36450066	36446412	36450066	-	transcript1069.chr18.nnic@NA	transcript1069.chr18.nnic	NA	36446412	36450066	Gene ID= novel_gene_chr18_1070 TPM= 3.19 Transcript Type= NA
chr18	36502242	36503914	36502242	36503914	-	transcript1067.chr18.nnic@NA	transcript1067.chr18.nnic	NA	36502242	36503914	Gene ID= novel_gene_chr18_1068 TPM= 4.25 Transcript Type= NA
chr18	36514016	36519284	36514016	36519284	-	transcript1065.chr18.nnic@NA	transcript1065.chr18.nnic	NA	36514016	36519284	Gene ID= novel_gene_chr18_1066 TPM= 37.18 Transcript Type= NA
chr18	36519957	36523078	36519957	36523078	-	transcript1071.chr18.nnic@NA	transcript1071.chr18.nnic	NA	36519957	36523078	Gene ID= novel_gene_chr18_1072 TPM= 21.24 Transcript Type= NA
chr18	36549706	36552790	36549706	36552790	-	transcript1079.chr18.nnic@NA	transcript1079.chr18.nnic	NA	36549706	36552790	Gene ID= novel_gene_chr18_1080 TPM= 5.31 Transcript Type= NA
chr18	36560828	36563788	36560828	36563788	-	transcript1081.chr18.nnic@NA	transcript1081.chr18.nnic	NA	36560828	36563788	Gene ID= novel_gene_chr18_1082 TPM= 3.19 Transcript Type= NA
chr18	36777785	36780057	36777785	36780057	+	transcript1063.chr18.nnic@NA	transcript1063.chr18.nnic	NA	36777785	36780057	Gene ID= novel_gene_chr18_1064 TPM= 9.56 Transcript Type= NA
chr18	36794106	36829195	36794106	36829195	-	ENST00000334295.8@TPGS2	ENST00000334295.8	protein_coding	36828683,36818894,36807847,36805374,36800198,36798449,36794106	36829195,36818973,36807934,36805502,36800311,36798609,36797050	Gene ID= ENSG00000134779.14 TPM= 40.36 Transcript Type= protein_coding
chr18	36796072	36828986	36796072	36828986	-	ENST00000383056.7@TPGS2	ENST00000383056.7	protein_coding	36828683,36818894,36807847,36800198,36798449,36796072	36828986,36818973,36807934,36800311,36798609,36797050	Gene ID= ENSG00000134779.14 TPM= 3.19 Transcript Type= protein_coding
chr18	36829117	37225324	36829117	37225324	+	ENST00000280020.9@KIAA1328	ENST00000280020.9	protein_coding	36829117,36834320,36835234,36844208,36885557,36959308,37066890,37160200,37172973,37222017	36829196,36834355,36835376,36844302,36885672,36959435,37067545,37160381,37173081,37225324	Gene ID= ENSG00000150477.14 TPM= 1.06 Transcript Type= protein_coding
chr18	41955186	42081396	41955186	42081396	+	transcript1099.chr18.nic@PIK3C3	transcript1099.chr18.nic	protein_coding	41955186,41957570,41962489,41970327,41987812,41990459,41993270,41995890,41996638,42004356,42013442,42015476,42020638,42027443,42029325,42033826,42037692,42038781,42040677,42043733,42049531,42064740,42067388,42081123	41955359,41957758,41962632,41970456,41987898,41990554,41993341,41995994,41996730,42004541,42013596,42015566,42020705,42027548,42029441,42033957,42037820,42038850,42040741,42043817,42049605,42064830,42067513,42081396	Gene ID= ENSG00000078142.12 TPM= 4.25 Transcript Type= NA
chr18	44676927	44679717	44676927	44679717	-	ENST00000592638.1@AC120049.1	ENST00000592638.1	lincRNA	44679616,44676927	44679717,44678889	Gene ID= ENSG00000267414.1 TPM= 1.06 Transcript Type= lincRNA
chr18	44679677	44952163	44679677	44952163	+	transcript1106.chr18.nnic@SETBP1	transcript1106.chr18.nnic	protein_coding	44679677,44701175,44869228,44949881	44680395,44701832,44869283,44952163	Gene ID= ENSG00000152217.16 TPM= 4.25 Transcript Type= NA
chr18	44680173	44877414	44680173	44877414	+	ENST00000426838.8@SETBP1	ENST00000426838.8	protein_coding	44680173,44701175,44869230,44876565	44680395,44701832,44869283,44877414	Gene ID= ENSG00000152217.16 TPM= 2.12 Transcript Type= protein_coding
chr18	44706525	44708958	44706525	44708958	-	transcript1113.chr18.nnic@NA	transcript1113.chr18.nnic	NA	44706525	44708958	Gene ID= novel_gene_chr18_1114 TPM= 2.12 Transcript Type= NA
chr18	44712955	44716720	44712955	44716720	-	transcript1111.chr18.nnic@NA	transcript1111.chr18.nnic	NA	44712955	44716720	Gene ID= novel_gene_chr18_1112 TPM= 9.56 Transcript Type= NA
chr18	45967179	45967281	45967179	45967281	-	transcript1118.chr18.nnic@NA	transcript1118.chr18.nnic	NA	45967179	45967281	Gene ID= novel_gene_chr18_1119 TPM= 2.12 Transcript Type= NA
chr18	45983536	46072260	45983536	46072260	-	ENST00000409746.5@PSTPIP2	ENST00000409746.5	protein_coding	46072156,46039947,46024609,46015903,46011181,46005469,45999436,45998794,45997749,45993605,45992106,45991902,45990722,45988702,45983536	46072260,46040047,46024686,46015937,46011287,46005531,45999534,45998839,45997828,45993703,45992202,45991983,45990756,45988759,45985450	Gene ID= ENSG00000152229.18 TPM= 2.12 Transcript Type= protein_coding
chr18	46080248	46098353	46080248	46098353	-	ENST00000398752.10@ATP5A1	ENST00000398752.10	protein_coding	46098172,46095053,46091682,46089823,46089566,46088109,46087341,46087008,46086387,46086113,46084504,46080248	46098353,46095131,46091851,46089996,46089732,46088257,46087492,46087232,46086494,46086257,46084654,46084363	Gene ID= ENSG00000152234.15 TPM= 19.65 Transcript Type= protein_coding
chr18	46084150	46098295	46084150	46098295	-	ENST00000590156.5@ATP5A1	ENST00000590156.5	protein_coding	46098172,46094980,46091682,46089823,46089566,46088109,46087341,46087008,46086387,46086113,46084504,46084150	46098295,46095131,46091851,46089996,46089732,46088257,46087492,46087232,46086494,46086257,46084654,46084363	Gene ID= ENSG00000152234.15 TPM= 3.72 Transcript Type= nonsense_mediated_decay
chr18	46104332	46128333	46104332	46128333	+	ENST00000282058.10@HAUS1	ENST00000282058.10	protein_coding	46104332,46105194,46118181,46119926,46122467,46123299,46124822,46125744,46128075	46104441,46105368,46118316,46120060,46122590,46123364,46124893,46125791,46128333	Gene ID= ENSG00000152240.12 TPM= 6.37 Transcript Type= protein_coding
chr18	46174034	46266983	46174034	46266983	+	ENST00000619301.4@C18orf25	ENST00000619301.4	protein_coding	46174034,46215811,46253697,46262929	46174330,46216595,46253823,46266983	Gene ID= ENSG00000152242.10 TPM= 27.62 Transcript Type= protein_coding
chr18	46174027	46266991	46174027	46266991	+	ENST00000615052.4@C18orf25	ENST00000615052.4	protein_coding	46174027,46215811,46240005,46253697,46262929	46174330,46216595,46240187,46253823,46266991	Gene ID= ENSG00000152242.10 TPM= 10.62 Transcript Type= protein_coding
chr18	46786699	46789297	46786699	46789297	-	ENST00000621730.1@AC090241.3	ENST00000621730.1	lincRNA	46786699	46789297	Gene ID= ENSG00000274776.1 TPM= 1.06 Transcript Type= lincRNA
chr18	46810442	46917456	46810442	46917456	-	transcript1168.chr18.nic@PIAS2	transcript1168.chr18.nic	protein_coding	46917322,46906227,46903527,46890580,46864164,46855565,46855345,46846707,46844734,46844054,46836357,46829734,46827959,46820933,46815312,46810442	46917456,46906315,46903633,46891054,46864248,46855615,46855435,46846841,46844839,46844127,46836517,46829867,46828130,46821072,46815349,46812612	Gene ID= ENSG00000078043.15 TPM= 4.25 Transcript Type= NA
chr18	46816472	46917505	46816472	46917505	-	transcript1184.chr18.nic@PIAS2	transcript1184.chr18.nic	protein_coding	46917322,46903527,46890580,46864164,46855565,46855345,46846707,46844734,46844054,46836357,46829734,46827959,46820933,46816472	46917505,46903635,46891054,46864248,46855615,46855435,46846841,46844839,46844127,46836517,46829867,46828130,46821072,46818447	Gene ID= ENSG00000078043.15 TPM= 3.19 Transcript Type= NA
chr18	46819642	46823086	46819642	46823086	+	transcript1205.chr18.nnic@NA	transcript1205.chr18.nnic	NA	46819642	46823086	Gene ID= novel_gene_chr18_1206 TPM= 14.87 Transcript Type= NA
chr18	46822802	46825020	46822802	46825020	+	transcript1207.chr18.nnic@NA	transcript1207.chr18.nnic	NA	46822802	46825020	Gene ID= novel_gene_chr18_1208 TPM= 2.12 Transcript Type= NA
chr18	47107408	47150492	47107408	47150492	-	transcript1211.chr18.nic@HDHD2	transcript1211.chr18.nic	protein_coding	47150378,47149049,47136339,47134496,47130244,47115132,47112977,47107408	47150492,47149108,47136449,47134704,47130328,47115348,47113040,47108785	Gene ID= ENSG00000167220.11 TPM= 2.66 Transcript Type= NA
chr18	47107408	47150525	47107408	47150525	-	transcript1212.chr18.nic@HDHD2	transcript1212.chr18.nic	protein_coding	47150378,47136339,47134496,47130244,47115132,47112977,47107408	47150525,47136449,47134677,47130328,47115348,47113040,47108785	Gene ID= ENSG00000167220.11 TPM= 2.66 Transcript Type= NA
chr18	47107403	47150520	47107403	47150520	-	ENST00000300605.10@HDHD2	ENST00000300605.10	protein_coding	47150378,47136339,47134496,47130244,47115132,47112977,47107403	47150520,47136449,47134704,47130328,47115348,47113040,47108785	Gene ID= ENSG00000167220.11 TPM= 47.27 Transcript Type= protein_coding
chr18	47107408	47150500	47107408	47150500	-	ENST00000588183.5@HDHD2	ENST00000588183.5	protein_coding	47150378,47136302,47134496,47130244,47115132,47112977,47107408	47150500,47136449,47134704,47130328,47115348,47113040,47108785	Gene ID= ENSG00000167220.11 TPM= 12.21 Transcript Type= nonsense_mediated_decay
chr18	47841225	47930861	47841225	47930861	-	transcript1222.chr18.nic@SMAD2	transcript1222.chr18.nic	protein_coding	47930800,47930361,47920072,47896521,47870475,47869243,47868323,47865059,47851274,47848475,47845663,47845340,47841225	47930861,47930446,47920169,47896809,47870564,47869436,47868457,47865133,47851327,47848687,47845800,47845484,47841950	Gene ID= ENSG00000175387.15 TPM= 3.01 Transcript Type= NA
chr18	47840255	47931135	47840255	47931135	-	transcript1226.chr18.nic@SMAD2	transcript1226.chr18.nic	protein_coding	47930800,47930361,47896521,47870475,47869243,47868323,47865059,47851274,47848475,47845663,47845340,47840255	47931135,47930446,47896809,47870564,47869436,47868457,47865133,47851327,47848687,47845800,47845484,47841950	Gene ID= ENSG00000175387.15 TPM= 13.81 Transcript Type= NA
chr18	47845184	47931062	47845184	47931062	-	transcript1244.chr18.nic@SMAD2	transcript1244.chr18.nic	protein_coding	47930800,47896521,47870475,47869243,47868323,47865059,47851274,47848475,47845663,47845184	47931062,47896809,47870564,47869436,47868457,47865133,47851327,47848687,47845800,47845484	Gene ID= ENSG00000175387.15 TPM= 3.19 Transcript Type= NA
chr18	47841225	47896811	47841225	47896811	-	ENST00000586040.5@SMAD2	ENST00000586040.5	protein_coding	47896521,47869243,47868323,47865059,47851274,47848475,47845663,47845340,47841225	47896811,47869436,47868457,47865133,47851327,47848687,47845800,47845484,47841950	Gene ID= ENSG00000175387.15 TPM= 1.41 Transcript Type= protein_coding
chr18	47865590	47866339	47865590	47866339	+	transcript1250.chr18.nnic@NA	transcript1250.chr18.nnic	NA	47865590	47866339	Gene ID= novel_gene_chr18_1251 TPM= 6.37 Transcript Type= NA
chr18	48027362	48040702	48027362	48040702	-	transcript1253.chr18.nic@ZBTB7C	transcript1253.chr18.nic	protein_coding	48039900,48027362	48040702,48029911	Gene ID= ENSG00000184828.9 TPM= 9.56 Transcript Type= NA
chr18	48539046	48863217	48539046	48863217	+	ENST00000256413.7@CTIF	ENST00000256413.7	protein_coding	48539046,48619538,48636614,48663752,48664447,48670669,48711619,48757919,48761390,48817221,48857588,48859344	48539312,48619745,48636685,48663825,48664551,48670744,48711695,48758405,48761689,48817376,48857641,48863217	Gene ID= ENSG00000134030.13 TPM= 31.51 Transcript Type= protein_coding
chr18	48760182	48860565	48760182	48860565	+	ENST00000587860.1@CTIF	ENST00000587860.1	protein_coding	48760182,48817221,48857588,48859344	48761689,48817376,48857641,48860565	Gene ID= ENSG00000134030.13 TPM= 43.55 Transcript Type= retained_intron
chr18	48553662	48556440	48553662	48556440	-	transcript1283.chr18.nnic@NA	transcript1283.chr18.nnic	NA	48553662	48556440	Gene ID= novel_gene_chr18_1284 TPM= 2.12 Transcript Type= NA
chr18	48560228	48561815	48560228	48561815	-	transcript1285.chr18.nnic@NA	transcript1285.chr18.nnic	NA	48560228	48561815	Gene ID= novel_gene_chr18_1286 TPM= 4.25 Transcript Type= NA
chr18	48648419	48650410	48648419	48650410	+	transcript1279.chr18.nnic@NA	transcript1279.chr18.nnic	NA	48648419	48650410	Gene ID= novel_gene_chr18_1280 TPM= 2.12 Transcript Type= NA
chr18	48698372	48702908	48698372	48702908	+	transcript1281.chr18.nnic@NA	transcript1281.chr18.nnic	NA	48698372	48702908	Gene ID= novel_gene_chr18_1282 TPM= 2.12 Transcript Type= NA
chr18	48760186	48862544	48760186	48862544	-	transcript1270.chr18.nnic@AC093567.1	transcript1270.chr18.nnic	antisense_RNA	48859342,48857586,48817219,48805834,48760186	48862544,48857641,48817376,48806034,48761687	Gene ID= ENSG00000267764.1 TPM= 3.37 Transcript Type= NA
chr18	48760186	48862544	48760186	48862544	-	transcript1273.chr18.nnic@AC093567.1	transcript1273.chr18.nnic	antisense_RNA	48859342,48857586,48817219,48760186	48862544,48857641,48817376,48761689	Gene ID= ENSG00000267764.1 TPM= 30.98 Transcript Type= NA
chr18	48832175	48834372	48832175	48834372	-	transcript1287.chr18.nnic@NA	transcript1287.chr18.nnic	NA	48832175	48834372	Gene ID= novel_gene_chr18_1288 TPM= 3.19 Transcript Type= NA
chr18	48919853	48949405	48919853	48949405	-	transcript1294.chr18.nnic@SMAD7	transcript1294.chr18.nnic	protein_coding	48949229,48948384,48942481,48919853	48949405,48948412,48942555,48921910	Gene ID= ENSG00000101665.8 TPM= 10.62 Transcript Type= NA
chr18	48919853	48950711	48919853	48950711	-	ENST00000262158.6@SMAD7	ENST00000262158.6	protein_coding	48949812,48948384,48942481,48919853	48950711,48948437,48942555,48921910	Gene ID= ENSG00000101665.8 TPM= 37.18 Transcript Type= protein_coding
chr18	48947299	48950976	48947299	48950976	+	transcript1306.chr18.nnic@NA	transcript1306.chr18.nnic	NA	48947299	48950976	Gene ID= novel_gene_chr18_1307 TPM= 3.19 Transcript Type= NA
chr18	48972296	48975369	48972296	48975369	-	transcript1308.chr18.nnic@NA	transcript1308.chr18.nnic	NA	48972296	48975369	Gene ID= novel_gene_chr18_1309 TPM= 2.12 Transcript Type= NA
chr18	49043804	49460725	49043804	49460725	-	transcript1313.chr18.nic@DYM	transcript1313.chr18.nic	protein_coding	49460398,49430255,49391593,49379665,49378567,49363161,49333728,49331864,49286434,49281997,49272178,49258380,49257010,49163685,49118744,49097402,49093217,49043804	49460725,49430447,49391645,49379758,49378700,49363233,49333853,49332006,49286616,49282175,49272303,49258493,49257104,49163787,49118926,49097515,49093311,49044204	Gene ID= ENSG00000141627.13 TPM= 3.72 Transcript Type= NA
chr18	49041474	49460802	49041474	49460802	-	ENST00000269445.10@DYM	ENST00000269445.10	protein_coding	49460398,49430255,49391593,49379665,49378567,49363161,49333728,49331864,49286434,49281997,49272178,49258380,49257010,49163685,49118744,49097402,49041474	49460802,49430447,49391645,49379758,49378700,49363233,49333853,49332006,49286616,49282175,49272303,49258493,49257104,49163787,49118926,49097515,49044204	Gene ID= ENSG00000141627.13 TPM= 29.21 Transcript Type= protein_coding
chr18	49481660	49487231	49481660	49487231	-	ENST00000318240.7@C18orf32	ENST00000318240.7	protein_coding	49487043,49483584,49481660	49487231,49483771,49482410	Gene ID= ENSG00000177576.11 TPM= 87.81 Transcript Type= protein_coding
chr18	49483164	49486099	49483164	49486099	+	transcript1344.chr18.nnic@NA	transcript1344.chr18.nnic	NA	49483164	49486099	Gene ID= novel_gene_chr18_1345 TPM= 2.12 Transcript Type= NA
chr18	49488453	49492482	49488453	49492482	-	ENST00000618619.4@RPL17	ENST00000618619.4	protein_coding	49492458,49491746,49491532,49491405,49490793,49490454,49489359,49488453	49492482,49491833,49491584,49491445,49490927,49490552,49489550,49488566	Gene ID= ENSG00000265681.7 TPM= 2.34 Transcript Type= protein_coding
chr18	49488484	49492486	49488484	49492486	-	transcript1331.chr18.nic@RPL17	transcript1331.chr18.nic	protein_coding	49492458,49491532,49491405,49490793,49490454,49489359,49488484	49492486,49491833,49491445,49490927,49490552,49489550,49488566	Gene ID= ENSG00000265681.7 TPM= 10.04 Transcript Type= NA
chr18	49488484	49492444	49488484	49492444	-	ENST00000579248.5@RPL17	ENST00000579248.5	protein_coding	49492258,49491532,49491405,49490793,49490454,49489359,49488484	49492444,49491584,49491445,49490927,49490552,49489550,49488566	Gene ID= ENSG00000265681.7 TPM= 11.1 Transcript Type= protein_coding
chr18	49488484	49492523	49488484	49492523	-	ENST00000580261.5@RPL17	ENST00000580261.5	protein_coding	49492458,49491532,49491405,49490793,49490454,49489359,49488484	49492523,49491584,49491445,49490927,49490552,49489550,49488566	Gene ID= ENSG00000265681.7 TPM= 189.54 Transcript Type= protein_coding
chr18	49488484	49491840	49488484	49491840	-	ENST00000579408.5@RPL17	ENST00000579408.5	protein_coding	49491532,49491405,49490793,49490454,49489359,49488484	49491840,49491445,49490927,49490552,49489550,49488566	Gene ID= ENSG00000265681.7 TPM= 16.41 Transcript Type= protein_coding
chr18	49589359	49592906	49589359	49592906	+	ENST00000623277.1@LIPG	ENST00000623277.1	protein_coding	49589359	49592906	Gene ID= ENSG00000101670.11 TPM= 1.06 Transcript Type= TEC
chr18	49782167	49813960	49782167	49813960	-	ENST00000285093.14@ACAA2	ENST00000285093.14	protein_coding	49813469,49802687,49797466,49795765,49794280,49792152,49791470,49787291,49785197,49782167	49813960,49802853,49797594,49795881,49794427,49792327,49791599,49787361,49785351,49783931	Gene ID= ENSG00000167315.17 TPM= 180.04 Transcript Type= protein_coding
chr18	49783505	49813953	49783505	49813953	-	ENST00000587994.5@ACAA2	ENST00000587994.5	protein_coding	49813817,49802687,49797466,49795765,49794280,49792152,49791470,49787291,49785197,49783505	49813953,49802853,49797594,49795881,49794427,49792327,49791599,49787361,49785351,49783931	Gene ID= ENSG00000167315.17 TPM= 7.44 Transcript Type= protein_coding
chr18	50268847	50281774	50268847	50281774	-	ENST00000269468.9@MBD1	ENST00000269468.9	protein_coding	50281363,50279883,50277090,50276832,50276662,50276378,50275835,50275600,50275129,50274977,50274186,50273564,50273334,50272824,50272677,50271469,50268847	50281774,50280017,50277204,50276998,50276744,50276418,50275981,50275728,50275245,50275045,50274353,50273863,50273471,50272955,50272738,50271540,50269818	Gene ID= ENSG00000141644.17 TPM= 6.72 Transcript Type= protein_coding
chr18	50268847	50281474	50268847	50281474	-	transcript1363.chr18.nic@MBD1	transcript1363.chr18.nic	protein_coding	50281363,50279883,50277090,50276832,50276662,50276378,50275835,50275600,50275129,50274977,50273564,50273334,50272824,50272677,50271469,50268847	50281474,50280017,50277204,50276998,50276744,50276418,50275981,50275728,50275245,50275045,50273863,50273426,50272955,50272738,50271540,50269818	Gene ID= ENSG00000141644.17 TPM= 2.47 Transcript Type= NA
chr18	50268847	50281774	50268847	50281774	-	ENST00000347968.7@MBD1	ENST00000347968.7	protein_coding	50281363,50279883,50277090,50276832,50276662,50276378,50275835,50275600,50275129,50274977,50273564,50273334,50272824,50272677,50271469,50268847	50281774,50280017,50277204,50276998,50276744,50276418,50275981,50275728,50275245,50275045,50273863,50273471,50272955,50272738,50271540,50269818	Gene ID= ENSG00000141644.17 TPM= 6.72 Transcript Type= protein_coding
chr18	50268846	50281769	50268846	50281769	-	ENST00000591416.5@MBD1	ENST00000591416.5	protein_coding	50281363,50279883,50277090,50276832,50276662,50276378,50275835,50275600,50275129,50274977,50274186,50273564,50273334,50272824,50272677,50268846	50281769,50280017,50277204,50276998,50276744,50276418,50275981,50275728,50275245,50275045,50274353,50273863,50273471,50272955,50272738,50271540	Gene ID= ENSG00000141644.17 TPM= 3.19 Transcript Type= protein_coding
chr18	50271042	50281530	50271042	50281530	-	transcript1372.chr18.nic@MBD1	transcript1372.chr18.nic	protein_coding	50281363,50279883,50277090,50276832,50276662,50276378,50275835,50275600,50275129,50274977,50274186,50273564,50273334,50272824,50272677,50271042	50281530,50280017,50277204,50276998,50276744,50276418,50275981,50275728,50275245,50275045,50274353,50273863,50273426,50272955,50272738,50271540	Gene ID= ENSG00000141644.17 TPM= 2.12 Transcript Type= NA
chr18	50271042	50281518	50271042	50281518	-	transcript1386.chr18.nic@MBD1	transcript1386.chr18.nic	protein_coding	50281363,50279883,50277090,50276832,50276662,50276378,50275835,50275600,50275129,50274977,50273564,50272824,50272677,50271042	50281518,50280017,50277204,50276998,50276744,50276418,50275981,50275728,50275245,50275045,50273863,50272955,50272738,50271540	Gene ID= ENSG00000141644.17 TPM= 2.12 Transcript Type= NA
chr18	50271050	50281466	50271050	50281466	-	ENST00000457839.6@MBD1	ENST00000457839.6	protein_coding	50281363,50279883,50277090,50276832,50276662,50276378,50275835,50275600,50275370,50275129,50274977,50274186,50273564,50273334,50272824,50272677,50271050	50281466,50280017,50277204,50276998,50276744,50276418,50275981,50275728,50275444,50275245,50275045,50274353,50273863,50273471,50272955,50272738,50271540	Gene ID= ENSG00000141644.17 TPM= 2.12 Transcript Type= protein_coding
chr18	50282343	50288304	50282343	50288304	-	ENST00000285106.10@CXXC1	ENST00000285106.10	protein_coding	50287587,50286740,50286539,50286022,50285749,50285325,50285002,50284732,50284378,50283894,50283705,50283515,50283265,50282854,50282343	50288304,50286858,50286639,50286257,50285928,50285351,50285247,50284839,50284562,50284101,50283815,50283564,50283361,50283006,50282739	Gene ID= ENSG00000154832.14 TPM= 33.99 Transcript Type= protein_coding
chr18	50560054	50726362	50560054	50726362	+	transcript1410.chr18.nic@MAPK4	transcript1410.chr18.nic	protein_coding	50560054,50663089,50715079,50721938,50725962	50560243,50664504,50715223,50722099,50726362	Gene ID= ENSG00000141639.11 TPM= 2.12 Transcript Type= NA
chr18	50560078	50731824	50560078	50731824	+	ENST00000400384.6@MAPK4	ENST00000400384.6	protein_coding	50560078,50663089,50715079,50721938,50725962,50729158	50560243,50664504,50715223,50722099,50726175,50731824	Gene ID= ENSG00000141639.11 TPM= 40.36 Transcript Type= protein_coding
chr18	50878734	50954257	50878734	50954257	+	ENST00000321341.10@ME2	ENST00000321341.10	protein_coding	50878734,50895809,50908063,50912801,50916168,50917347,50918110,50920456,50920661,50921074,50924098,50925756,50932258,50939570,50940288,50947017	50879308,50895928,50908196,50912950,50916243,50917508,50918213,50920565,50920758,50921187,50924212,50925898,50932360,50939640,50940386,50954257	Gene ID= ENSG00000082212.12 TPM= 60.54 Transcript Type= protein_coding
chr18	50879067	50915515	50879067	50915515	+	transcript1418.chr18.nic@ME2	transcript1418.chr18.nic	protein_coding	50879067,50895809,50908063,50912801	50879308,50895928,50908196,50915515	Gene ID= ENSG00000082212.12 TPM= 2.12 Transcript Type= NA
chr18	50879080	50947852	50879080	50947852	+	ENST00000640530.1@ME2	ENST00000640530.1	protein_coding	50879080,50895809,50908063,50912801,50918110,50920456,50920661,50921074,50924098,50925756,50932258,50939570,50940288,50947017	50879308,50895928,50908196,50912950,50918213,50920565,50920758,50921187,50924212,50925898,50932360,50939640,50940386,50947852	Gene ID= ENSG00000082212.12 TPM= 3.19 Transcript Type= nonsense_mediated_decay
chr18	50879166	50947874	50879166	50947874	+	ENST00000639115.1@ME2	ENST00000639115.1	protein_coding	50879166,50895809,50908063,50912801,50917347,50918110,50920456,50920661,50921074,50924098,50925756,50932258,50939570,50940288,50947017	50879308,50895928,50908196,50912950,50917508,50918213,50920565,50920758,50921187,50924212,50925898,50932360,50939640,50940386,50947874	Gene ID= ENSG00000082212.12 TPM= 2.12 Transcript Type= nonsense_mediated_decay
chr18	50968016	50988121	50968016	50988121	+	ENST00000269466.7@ELAC1	ENST00000269466.7	protein_coding	50968016,50974397,50984096,50986619	50968114,50974561,50984563,50988121	Gene ID= ENSG00000141642.8 TPM= 5.31 Transcript Type= protein_coding
chr18	50968045	50969866	50968045	50969866	+	ENST00000586966.2@ELAC1	ENST00000586966.2	protein_coding	50968045,50968432	50968114,50969866	Gene ID= ENSG00000141642.8 TPM= 2.12 Transcript Type= processed_transcript
chr18	51025864	51028049	51025864	51028049	+	transcript1440.chr18.nnic@NA	transcript1440.chr18.nnic	NA	51025864	51028049	Gene ID= novel_gene_chr18_1441 TPM= 8.5 Transcript Type= NA
chr18	51030205	51079777	51030205	51079777	+	transcript1437.chr18.nnic@SMAD4	transcript1437.chr18.nnic	protein_coding	51030205,51046920,51048686,51049295,51054781,51059866,51065423,51067019,51076638,51078256	51030623,51047295,51048860,51049324,51054993,51059916,51065606,51067187,51076776,51079777	Gene ID= ENSG00000141646.13 TPM= 7.44 Transcript Type= NA
chr18	51030222	51031727	51030222	51031727	+	transcript1442.chr18.nnic@NA	transcript1442.chr18.nnic	NA	51030222	51031727	Gene ID= novel_gene_chr18_1443 TPM= 2.12 Transcript Type= NA
chr18	54154841	54224615	54154841	54224615	-	transcript1447.chr18.nic@MBD2	transcript1447.chr18.nic	protein_coding	54224018,54204998,54188874,54187714,54166076,54164523,54159765,54154841	54224615,54205157,54189011,54187837,54166166,54164700,54159903,54155311	Gene ID= ENSG00000134046.11 TPM= 2.66 Transcript Type= NA
chr18	54151601	54224788	54151601	54224788	-	ENST00000256429.7@MBD2	ENST00000256429.7	protein_coding	54224018,54204998,54188874,54166076,54164523,54159765,54151601	54224788,54205157,54189011,54166166,54164700,54159903,54155311	Gene ID= ENSG00000134046.11 TPM= 72.76 Transcript Type= protein_coding
chr18	54269404	54298234	54269404	54298234	+	ENST00000579534.5@POLI	ENST00000579534.5	protein_coding	54269404,54271360,54273926,54277703,54280667,54282837,54283922,54287281,54291833,54293649	54269661,54271485,54274090,54277855,54280903,54283015,54284013,54287411,54292038,54298234	Gene ID= ENSG00000101751.10 TPM= 18.06 Transcript Type= protein_coding
chr18	54901509	54959508	54901509	54959508	-	ENST00000591504.5@CCDC68	ENST00000591504.5	protein_coding	54959336,54945388,54942675,54940997,54937957,54936833,54934820,54928800,54919271,54917913,54907786,54901509	54959508,54945477,54942803,54941083,54938097,54936958,54934948,54928882,54919376,54917996,54907862,54904415	Gene ID= ENSG00000166510.13 TPM= 1.06 Transcript Type= protein_coding
chr18	55226784	55588232	55226784	55588232	-	ENST00000354452.7@TCF4	ENST00000354452.7	protein_coding	55588038,55587045,55585280,55464076,55461019,55403454,55350874,55350359,55279551,55275619,55269831,55261466,55259949,55257315,55254497,55234548,55232509,55228847,55228221,55226784	55588232,55587136,55585352,55464137,55461115,55403518,55351003,55350408,55279656,55275752,55269963,55261533,55260027,55257391,55254700,55234683,55232671,55229076,55228361,55228030	Gene ID= ENSG00000196628.15 TPM= 2.12 Transcript Type= protein_coding
chr18	55226646	55588625	55226646	55588625	-	ENST00000564999.5@TCF4	ENST00000564999.5	protein_coding	55588449,55587045,55585280,55464076,55461019,55403454,55350874,55350359,55279551,55275619,55269831,55261466,55259949,55257315,55254497,55234548,55232521,55228847,55228221,55226646	55588625,55587136,55585352,55464137,55461115,55403518,55351003,55350408,55279656,55275752,55269963,55261533,55260027,55257391,55254700,55234683,55232671,55229076,55228361,55228030	Gene ID= ENSG00000196628.15 TPM= 1.06 Transcript Type= protein_coding
chr18	55222334	55588629	55222334	55588629	-	ENST00000356073.8@TCF4	ENST00000356073.8	protein_coding	55588038,55587045,55585280,55464076,55461019,55403454,55350874,55350359,55279551,55275619,55269831,55261466,55259949,55257315,55254497,55234548,55232521,55228847,55228221,55222334	55588629,55587136,55585352,55464137,55461115,55403518,55351003,55350408,55279656,55275752,55269963,55261533,55260027,55257391,55254700,55234683,55232671,55229076,55228361,55228030	Gene ID= ENSG00000196628.15 TPM= 2.12 Transcript Type= protein_coding
chr18	55226793	55589807	55226793	55589807	-	ENST00000629387.2@TCF4	ENST00000629387.2	protein_coding	55589297,55587045,55585280,55464076,55461019,55403454,55350874,55350359,55279551,55275619,55269831,55261466,55259949,55257315,55254497,55234548,55232509,55228847,55228221,55226793	55589807,55587136,55585352,55464137,55461115,55403518,55351003,55350408,55279656,55275752,55269963,55261533,55260027,55257391,55254700,55234683,55232671,55229076,55228361,55228030	Gene ID= ENSG00000196628.15 TPM= 2.12 Transcript Type= protein_coding
chr18	55227752	55589836	55227752	55589836	-	ENST00000537578.5@TCF4	ENST00000537578.5	protein_coding	55589297,55585280,55464076,55461019,55403454,55350874,55350359,55279551,55275619,55269831,55261466,55259949,55257315,55254497,55234548,55232509,55228847,55228221,55227752	55589836,55585352,55464137,55461115,55403518,55351003,55350408,55279656,55275752,55269963,55261533,55260027,55257391,55254700,55234683,55232671,55229076,55228361,55228030	Gene ID= ENSG00000196628.15 TPM= 3.19 Transcript Type= protein_coding
chr18	55227689	55510772	55227689	55510772	-	ENST00000543082.5@TCF4	ENST00000543082.5	protein_coding	55510579,55464076,55461019,55403454,55350874,55350359,55279551,55275619,55269831,55261466,55259949,55257315,55254497,55234548,55232521,55228847,55228221,55227689	55510772,55464137,55461115,55403518,55351003,55350408,55279656,55275752,55269963,55261533,55260027,55257391,55254700,55234683,55232671,55229076,55228361,55228030	Gene ID= ENSG00000196628.15 TPM= 3.19 Transcript Type= protein_coding
chr18	55226784	55401688	55226784	55401688	-	transcript1480.chr18.nic@TCF4	transcript1480.chr18.nic	protein_coding	55401580,55350874,55350359,55279551,55275619,55269831,55261466,55259949,55257315,55254497,55234548,55232521,55228847,55228221,55226784	55401688,55351003,55350408,55279656,55275752,55269963,55261533,55260027,55257391,55254700,55234683,55232671,55229076,55228361,55228030	Gene ID= ENSG00000196628.15 TPM= 2.12 Transcript Type= NA
chr18	55226644	55321986	55226644	55321986	-	ENST00000570287.6@TCF4	ENST00000570287.6	protein_coding	55321670,55279551,55275619,55269831,55261466,55259949,55257315,55254497,55234548,55232521,55228847,55228221,55226644	55321986,55279656,55275752,55269963,55261533,55260027,55257391,55254700,55234683,55232671,55229076,55228361,55228030	Gene ID= ENSG00000196628.15 TPM= 1.06 Transcript Type= protein_coding
chr18	55227846	55589806	55227846	55589806	-	ENST00000568740.5@TCF4	ENST00000568740.5	protein_coding	55589297,55585280,55464076,55461019,55403454,55350874,55350359,55279551,55275619,55269831,55261466,55259949,55257315,55254497,55234548,55232521,55228847,55228221,55227846	55589806,55585352,55464137,55461115,55403518,55351000,55350408,55279656,55275752,55269963,55261533,55260027,55257391,55254700,55234683,55232671,55229076,55228361,55228030	Gene ID= ENSG00000196628.15 TPM= 1.06 Transcript Type= protein_coding
chr18	55227849	55401757	55227849	55401757	-	ENST00000537856.7@TCF4	ENST00000537856.7	protein_coding	55401580,55350874,55350359,55279551,55275619,55269831,55261466,55259949,55257315,55254497,55234548,55232521,55228847,55228221,55227849	55401757,55351000,55350408,55279656,55275752,55269963,55261533,55260027,55257391,55254700,55234683,55232671,55229076,55228361,55228030	Gene ID= ENSG00000196628.15 TPM= 2.12 Transcript Type= protein_coding
chr18	56602822	56638634	56602822	56638634	-	transcript1495.chr18.nnic@TXNL1	transcript1495.chr18.nnic	protein_coding	56638343,56626361,56624288,56618004,56616245,56614424,56610993,56604436,56602822	56638634,56626457,56624461,56618126,56616314,56614596,56611097,56604478,56603056	Gene ID= ENSG00000091164.12 TPM= 41.42 Transcript Type= NA
chr18	56602824	56651274	56602824	56651274	-	ENST00000587807.5@TXNL1	ENST00000587807.5	protein_coding	56651017,56638343,56626361,56626162,56624288,56618004,56616245,56614424,56610993,56602824	56651274,56639039,56626457,56626266,56624461,56618126,56616314,56614596,56611097,56603056	Gene ID= ENSG00000091164.12 TPM= 3.19 Transcript Type= nonsense_mediated_decay
chr18	56604511	56638627	56604511	56638627	-	transcript1504.chr18.nnic@TXNL1	transcript1504.chr18.nnic	protein_coding	56638343,56626361,56624288,56618004,56616245,56614424,56610993,56604511	56638627,56626457,56624461,56618126,56616314,56614596,56611097,56605384	Gene ID= ENSG00000091164.12 TPM= 5.31 Transcript Type= NA
chr18	56762899	56764771	56762899	56764771	-	transcript1509.chr18.nnic@NA	transcript1509.chr18.nnic	NA	56762899	56764771	Gene ID= novel_gene_chr18_1510 TPM= 2.12 Transcript Type= NA
chr18	57548283	57586772	57548283	57586772	-	ENST00000262093.9@FECH	ENST00000262093.9	protein_coding	57586554,57580073,57573246,57571392,57566447,57562874,57559145,57554845,57554260,57551315,57548283	57586772,57580199,57573365,57571540,57566581,57562980,57559243,57554952,57554424,57551374,57550846	Gene ID= ENSG00000066926.10 TPM= 8.5 Transcript Type= protein_coding
chr18	57549510	57586654	57549510	57586654	-	ENST00000382873.7@FECH	ENST00000382873.7	protein_coding	57586554,57580055,57573246,57571392,57566447,57562874,57559145,57554845,57554260,57551315,57549510	57586654,57580199,57573365,57571540,57566581,57562980,57559243,57554952,57554424,57551374,57550846	Gene ID= ENSG00000066926.10 TPM= 29.74 Transcript Type= protein_coding
chr18	57600656	57622173	57600656	57622173	-	ENST00000256854.9@NARS	ENST00000256854.9	protein_coding	57621708,57620569,57615817,57615641,57613602,57611637,57609357,57607444,57607134,57606616,57605857,57602812,57602355,57600656	57622173,57620651,57615975,57615730,57613680,57611707,57609443,57607665,57607333,57606751,57605970,57602943,57602486,57601783	Gene ID= ENSG00000134440.11 TPM= 218.09 Transcript Type= protein_coding
chr18	57648357	57650650	57648357	57650650	-	transcript1548.chr18.nnic@NA	transcript1548.chr18.nnic	NA	57648357	57650650	Gene ID= novel_gene_chr18_1549 TPM= 2.12 Transcript Type= NA
chr18	57771384	57773216	57771384	57773216	+	transcript1546.chr18.nnic@NA	transcript1546.chr18.nnic	NA	57771384	57773216	Gene ID= novel_gene_chr18_1547 TPM= 3.19 Transcript Type= NA
chr18	57803261	57805474	57803261	57805474	+	transcript1544.chr18.nnic@NA	transcript1544.chr18.nnic	NA	57803261	57805474	Gene ID= novel_gene_chr18_1545 TPM= 5.31 Transcript Type= NA
chr18	58044387	58045477	58044387	58045477	+	ENST00000617539.1@NEDD4L	ENST00000617539.1	protein_coding	58044387,58045072	58044708,58045477	Gene ID= ENSG00000049759.17 TPM= 1.06 Transcript Type= protein_coding
chr18	58255209	58396705	58255209	58396705	+	transcript1555.chr18.nnic@NEDD4L	transcript1555.chr18.nnic	protein_coding	58255209,58315982,58322425,58323232,58324996,58328995,58330738,58333818,58342906,58349537,58350991,58351146,58357194,58364268,58365999,58367746,58370397,58373174,58383246,58385526,58387439,58389085,58390646,58391487,58396167	58256774,58316032,58322486,58323334,58325162,58329127,58330914,58333892,58343103,58349614,58351045,58351199,58357252,58364333,58366228,58367867,58370467,58373269,58383319,58385586,58387498,58389192,58390742,58391559,58396705	Gene ID= ENSG00000049759.17 TPM= 3.72 Transcript Type= NA
chr18	58255505	58398157	58255505	58398157	+	transcript1560.chr18.nnic@NEDD4L	transcript1560.chr18.nnic	protein_coding	58255505,58315982,58322425,58323232,58324996,58328995,58330738,58333818,58349537,58350991,58351146,58357194,58364268,58365999,58367746,58370397,58373174,58383246,58385526,58387439,58389085,58390646,58391487,58396167	58256774,58316032,58322486,58323334,58325162,58329127,58330914,58333892,58349614,58351045,58351199,58357252,58364333,58366228,58367867,58370467,58373269,58383319,58385586,58387498,58389192,58390742,58391559,58398157	Gene ID= ENSG00000049759.17 TPM= 4.25 Transcript Type= NA
chr18	58345918	58347326	58345918	58347326	-	transcript1567.chr18.nnic@NA	transcript1567.chr18.nnic	NA	58345918	58347326	Gene ID= novel_gene_chr18_1568 TPM= 3.19 Transcript Type= NA
chr18	58396715	58400717	58396715	58400717	-	transcript1565.chr18.nnic@NA	transcript1565.chr18.nnic	NA	58396715	58400717	Gene ID= novel_gene_chr18_1566 TPM= 5.31 Transcript Type= NA
chr18	58534850	58629150	58534850	58629150	-	transcript1575.chr18.nic@ALPK2	transcript1575.chr18.nic	protein_coding	58628764,58611689,58607322,58578814,58534850	58629150,58611817,58607439,58580548,58538224	Gene ID= ENSG00000198796.6 TPM= 5.84 Transcript Type= NA
chr18	58481247	58628957	58481247	58628957	-	ENST00000361673.3@ALPK2	ENST00000361673.3	protein_coding	58628764,58611689,58607322,58578814,58534834,58529091,58523935,58523806,58516908,58514993,58503931,58498049,58481247	58628957,58611817,58607439,58580548,58538224,58529238,58524062,58523841,58517182,58515081,58504148,58498097,58482039	Gene ID= ENSG00000198796.6 TPM= 61.07 Transcript Type= protein_coding
chr18	58483728	58488062	58483728	58488062	-	transcript1587.chr18.nnic@NA	transcript1587.chr18.nnic	NA	58483728	58488062	Gene ID= novel_gene_chr18_1588 TPM= 2.12 Transcript Type= NA
chr18	58571844	58574458	58571844	58574458	+	transcript1581.chr18.nnic@NA	transcript1581.chr18.nnic	NA	58571844	58574458	Gene ID= novel_gene_chr18_1582 TPM= 2.12 Transcript Type= NA
chr18	58576310	58582577	58576310	58582577	+	transcript1583.chr18.nnic@NA	transcript1583.chr18.nnic	NA	58576310	58582577	Gene ID= novel_gene_chr18_1584 TPM= 4.25 Transcript Type= NA
chr18	58620503	58622035	58620503	58622035	+	transcript1585.chr18.nnic@NA	transcript1585.chr18.nnic	NA	58620503	58622035	Gene ID= novel_gene_chr18_1586 TPM= 2.12 Transcript Type= NA
chr18	58671386	58754477	58671386	58754477	+	ENST00000348428.7@MALT1	ENST00000348428.7	protein_coding	58671386,58681170,58696366,58700441,58709378,58709976,58710921,58714083,58715935,58723048,58733397,58734307,58735202,58741865,58744338,58745666,58747405	58671852,58681336,58696487,58700591,58709556,58710072,58710953,58714109,58715967,58723251,58733574,58734381,58735329,58742014,58744495,58745791,58754477	Gene ID= ENSG00000172175.12 TPM= 3.19 Transcript Type= protein_coding
chr18	58863314	58986480	58863314	58986480	+	transcript1601.chr18.nic@ZNF532	transcript1601.chr18.nic	protein_coding	58863314,58865304,58865470,58918271,58934433,58939445,58948067,58953518,58979055,58981470,58983972	58863750,58865385,58865579,58920633,58934614,58939621,58948229,58953799,58979167,58981617,58986480	Gene ID= ENSG00000074657.13 TPM= 19.12 Transcript Type= NA
chr18	58919347	58985944	58919347	58985944	+	transcript1605.chr18.nic@ZNF532	transcript1605.chr18.nic	protein_coding	58919347,58979055,58981470,58983972	58920633,58979167,58981617,58985944	Gene ID= ENSG00000074657.13 TPM= 5.31 Transcript Type= NA
chr18	58863613	58985944	58863613	58985944	+	ENST00000589288.5@ZNF532	ENST00000589288.5	protein_coding	58863613,58865470,58918271,58934433,58939445,58948067,58953518,58979055,58981470,58983972	58863686,58865579,58920633,58934614,58939621,58948229,58953799,58979167,58981617,58985944	Gene ID= ENSG00000074657.13 TPM= 11.68 Transcript Type= protein_coding
chr18	59139477	59158836	59139477	59158836	+	ENST00000587834.5@SEC11C	ENST00000587834.5	protein_coding	59139477,59149513,59152536,59155688,59157608,59158632	59140035,59149622,59152685,59155807,59157665,59158836	Gene ID= ENSG00000166562.8 TPM= 28.68 Transcript Type= protein_coding
chr18	59327823	59359962	59327823	59359962	-	ENST00000251047.5@LMAN1	ENST00000251047.5	protein_coding	59359031,59355504,59355313,59354519,59353202,59349113,59347513,59345919,59338760,59338557,59333091,59331418,59327823	59359962,59355658,59355420,59354580,59353301,59349236,59347571,59346051,59338953,59338627,59333244,59331539,59331129	Gene ID= ENSG00000074695.5 TPM= 59.48 Transcript Type= protein_coding
chr18	61606068	61606916	61606068	61606916	-	ENST00000586949.1@AC090409.1	ENST00000586949.1	lincRNA	61606851,61606068	61606916,61606654	Gene ID= ENSG00000267279.1 TPM= 4.25 Transcript Type= lincRNA
chr18	61842663	61844880	61842663	61844880	+	transcript1621.chr18.nnic@NA	transcript1621.chr18.nnic	NA	61842663	61844880	Gene ID= novel_gene_chr18_1622 TPM= 3.19 Transcript Type= NA
chr18	62044549	62187038	62044549	62187038	-	ENST00000400334.7@PIGN	ENST00000400334.7	protein_coding	62186844,62163531,62161133,62157687,62157129,62154545,62148214,62146971,62145909,62143306,62140420,62138983,62138243,62114561,62113134,62109834,62106986,62106789,62105543,62102794,62101075,62095848,62090476,62088756,62085209,62084531,62082673,62074779,62072673,62044549	62187038,62163656,62161385,62157808,62157227,62154651,62148338,62147101,62146025,62143346,62140479,62139075,62138298,62114639,62113316,62109973,62107085,62106881,62105634,62102902,62101183,62095950,62090578,62088842,62085264,62084606,62082746,62074821,62072725,62045979	Gene ID= ENSG00000197563.10 TPM= 1.06 Transcript Type= protein_coding
chr18	62042852	62187056	62042852	62187056	-	ENST00000640876.1@PIGN	ENST00000640876.1	protein_coding	62186844,62161133,62157687,62157129,62154545,62148214,62146971,62145909,62143306,62140420,62138983,62138243,62114561,62113134,62109834,62106986,62106789,62105543,62102794,62101075,62095848,62090476,62088756,62085209,62084531,62082673,62074779,62072673,62042852	62187056,62161385,62157808,62157227,62154651,62148338,62147101,62146025,62143346,62140479,62139075,62138298,62114639,62113316,62109973,62107085,62106881,62105634,62102902,62101183,62095950,62090578,62088842,62085264,62084606,62082746,62074821,62072725,62045979	Gene ID= ENSG00000197563.10 TPM= 3.19 Transcript Type= protein_coding
chr18	62044234	62187077	62044234	62187077	-	ENST00000640145.1@PIGN	ENST00000640145.1	protein_coding	62187023,62161133,62157687,62157129,62154545,62148214,62146971,62145909,62143306,62140420,62138983,62138243,62114561,62113134,62109834,62106986,62106789,62105543,62102794,62101075,62095848,62090476,62088756,62085209,62084531,62082673,62074779,62072673,62044234	62187077,62161385,62157808,62157227,62154651,62148338,62147101,62146025,62143346,62140479,62139075,62138298,62114639,62113316,62109973,62107085,62106881,62105634,62102902,62101183,62095950,62090578,62088842,62085264,62084606,62082746,62074821,62072725,62045979	Gene ID= ENSG00000197563.10 TPM= 2.12 Transcript Type= protein_coding
chr18	62044233	62187046	62044233	62187046	-	transcript1637.chr18.nic@PIGN	transcript1637.chr18.nic	protein_coding	62186844,62161133,62157687,62157129,62148214,62146971,62145909,62143306,62140420,62138983,62138243,62114561,62113134,62109834,62106986,62106789,62105543,62102794,62101075,62095848,62090476,62088756,62085209,62084531,62082673,62074779,62072673,62044233	62187046,62161385,62157808,62157227,62148253,62147101,62146025,62143346,62140479,62139075,62138298,62114639,62113316,62109973,62107085,62106881,62105634,62102902,62101183,62095950,62090578,62088842,62085264,62084606,62082746,62074821,62072725,62045979	Gene ID= ENSG00000197563.10 TPM= 2.12 Transcript Type= NA
chr18	62093490	62096626	62093490	62096626	+	transcript1643.chr18.nnic@NA	transcript1643.chr18.nnic	NA	62093490	62096626	Gene ID= novel_gene_chr18_1644 TPM= 2.12 Transcript Type= NA
chr18	62187255	62307112	62187255	62307112	+	transcript1647.chr18.nic@KIAA1468	transcript1647.chr18.nic	protein_coding	62187255,62211153,62221037,62221219,62221384,62227289,62227598,62228305,62231194,62232332,62244764,62252664,62255407,62257948,62258512,62261511,62263989,62264729,62266701,62268869,62273980,62275374,62279774,62280646,62282306,62287351,62291543,62298790,62305414	62188031,62211242,62221108,62221274,62221497,62227492,62227689,62228598,62231269,62232427,62244876,62252754,62255478,62258088,62258676,62261658,62264145,62264852,62266749,62268948,62274086,62275473,62279856,62280709,62282444,62287467,62291631,62298860,62307112	Gene ID= ENSG00000134444.13 TPM= 5.84 Transcript Type= NA
chr18	62523007	62578583	62523007	62578583	+	ENST00000269499.9@ZCCHC2	ENST00000269499.9	protein_coding	62523007,62539681,62542498,62544802,62550348,62556203,62558687,62560587,62563009,62564571,62565002,62570103,62574057,62576512	62524363,62539792,62542574,62544873,62550460,62556297,62558770,62560644,62563144,62564635,62565096,62570231,62575550,62578583	Gene ID= ENSG00000141664.9 TPM= 2.12 Transcript Type= protein_coding
chr18	62525051	62525272	62525051	62525272	+	transcript1659.chr18.nnic@NA	transcript1659.chr18.nnic	NA	62525051	62525272	Gene ID= novel_gene_chr18_1660 TPM= 2.12 Transcript Type= NA
chr18	62715450	62980433	62715450	62980433	+	ENST00000262719.9@PHLPP1	ENST00000262719.9	protein_coding	62715450,62830035,62838784,62860435,62895011,62895781,62902964,62905224,62914913,62919959,62941718,62945109,62958629,62963368,62972514,62975397,62978262	62717259,62830231,62838909,62860601,62895157,62896011,62903166,62905284,62915008,62920114,62941918,62945271,62958759,62963472,62972708,62975625,62980433	Gene ID= ENSG00000081913.13 TPM= 3.19 Transcript Type= protein_coding
chr18	63123346	63320128	63123346	63320128	-	ENST00000398117.1@BCL2	ENST00000398117.1	protein_coding	63318082,63123346	63320128,63128759	Gene ID= ENSG00000171791.12 TPM= 19.12 Transcript Type= protein_coding
chr18	63330726	63367550	63330726	63367550	-	transcript1670.chr18.nnic@KDSR	transcript1670.chr18.nnic	protein_coding	63367011,63362779,63359736,63355498,63355204,63350888,63338800,63335257,63330726	63367550,63362868,63359792,63355563,63355299,63351079,63338883,63335358,63331901	Gene ID= ENSG00000119537.15 TPM= 10.62 Transcript Type= NA
chr18	63367328	63381629	63367328	63381629	+	ENST00000589905.1@AC036176.1	ENST00000589905.1	antisense_RNA	63367328,63381377	63367859,63381629	Gene ID= ENSG00000267390.1 TPM= 16.99 Transcript Type= antisense_RNA
chr18	63389305	63422498	63389305	63422498	-	transcript1674.chr18.nnic@VPS4B	transcript1674.chr18.nnic	protein_coding	63422233,63411467,63410290,63407432,63403707,63400547,63400048,63399242,63397034,63393409,63392120,63389305	63422498,63411578,63410446,63407499,63403826,63400703,63400196,63399323,63397253,63393549,63392186,63391076	Gene ID= ENSG00000119541.9 TPM= 3.19 Transcript Type= NA
chr18	63389190	63422463	63389190	63422463	-	ENST00000238497.9@VPS4B	ENST00000238497.9	protein_coding	63422233,63411467,63410290,63407432,63403707,63400547,63400048,63399242,63397034,63393409,63389190	63422463,63411578,63410446,63407499,63403826,63400703,63400196,63399323,63397253,63393549,63391076	Gene ID= ENSG00000119541.9 TPM= 16.99 Transcript Type= protein_coding
chr18	63969925	63989374	63969925	63989374	+	ENST00000397985.6@SERPINB8	ENST00000397985.6	protein_coding	63969925,63978299,63979801,63981721,63983579,63985093,63986874	63970170,63978476,63979938,63981838,63983721,63985245,63989374	Gene ID= ENSG00000166401.14 TPM= 2.12 Transcript Type= protein_coding
chr18	63970119	63986653	63970119	63986653	+	ENST00000397988.7@SERPINB8	ENST00000397988.7	protein_coding	63970119,63978299,63979801,63981721,63983579,63985093,63986258	63970170,63978476,63979938,63981838,63983721,63985245,63986653	Gene ID= ENSG00000166401.14 TPM= 1.06 Transcript Type= protein_coding
chr18	66504812	66604138	66504812	66604138	-	ENST00000579658.5@CDH19	ENST00000579658.5	protein_coding	66603954,66572010,66568416,66554405,66551094,66544719,66543971,66534986,66529845,66511568,66508995,66504812	66604138,66572316,66568710,66554524,66551258,66544903,66544224,66535107,66529966,66511685,66509218,66505302	Gene ID= ENSG00000071991.8 TPM= 1.06 Transcript Type= nonsense_mediated_decay
chr18	67506582	67516980	67506582	67516980	-	ENST00000310045.7@DSEL	ENST00000310045.7	protein_coding	67516361,67506582	67516980,67515492	Gene ID= ENSG00000171451.13 TPM= 2.12 Transcript Type= protein_coding
chr18	68673688	68715298	68673688	68715298	-	ENST00000299608.6@TMX3	ENST00000299608.6	protein_coding	68714936,68713846,68711364,68710021,68701745,68700405,68697932,68697226,68691295,68687667,68684428,68684190,68682925,68680981,68679463,68673688	68715298,68713900,68711403,68710144,68701790,68700485,68698031,68697303,68691361,68687765,68684485,68684243,68682981,68681110,68679531,68677193	Gene ID= ENSG00000166479.9 TPM= 24.43 Transcript Type= protein_coding
chr18	68674732	68715065	68674732	68715065	-	transcript1709.chr18.nic@TMX3	transcript1709.chr18.nic	protein_coding	68714936,68713846,68711364,68710021,68701745,68697932,68697226,68691295,68687667,68684428,68684190,68682925,68680981,68679463,68674732	68715065,68713900,68711403,68710144,68701790,68698031,68697303,68691361,68687765,68684485,68684243,68682981,68681110,68679531,68677193	Gene ID= ENSG00000166479.9 TPM= 2.12 Transcript Type= NA
chr18	68707195	68715079	68707195	68715079	-	transcript1717.chr18.nic@TMX3	transcript1717.chr18.nic	protein_coding	68714936,68713846,68711364,68707195	68715079,68713900,68711403,68710144	Gene ID= ENSG00000166479.9 TPM= 3.19 Transcript Type= NA
chr18	69400837	69760116	69400837	69760116	+	transcript1726.chr18.nic@DOK6	transcript1726.chr18.nic	protein_coding	69400837,69564487,69599384,69677734,69698404,69738965,69757756	69401310,69564594,69599498,69677853,69698593,69739103,69760116	Gene ID= ENSG00000206052.10 TPM= 6.37 Transcript Type= NA
chr18	69400846	69403534	69400846	69403534	+	transcript1729.chr18.nnic@DOK6	transcript1729.chr18.nnic	protein_coding	69400846,69402865	69401310,69403534	Gene ID= ENSG00000206052.10 TPM= 5.31 Transcript Type= NA
chr18	70335929	70337310	70335929	70337310	-	ENST00000578633.1@LIVAR	ENST00000578633.1	lincRNA	70337214,70335929	70337310,70336215	Gene ID= ENSG00000266304.1 TPM= 1.06 Transcript Type= lincRNA
chr18	74148484	74159297	74148484	74159297	+	transcript1756.chr18.nic@TIMM21	transcript1756.chr18.nic	protein_coding	74148484,74155145,74155306,74158014,74158171	74149109,74155207,74155403,74158087,74159297	Gene ID= ENSG00000075336.11 TPM= 5.31 Transcript Type= NA
chr18	74250847	74292016	74250847	74292016	-	ENST00000340533.8@CYB5A	ENST00000340533.8	protein_coding	74291747,74263349,74260915,74255741,74250847	74292016,74263477,74260944,74255775,74253665	Gene ID= ENSG00000166347.18 TPM= 1.06 Transcript Type= protein_coding
chr18	74253297	74291935	74253297	74291935	-	ENST00000494131.6@CYB5A	ENST00000494131.6	protein_coding	74291747,74263349,74260915,74256830,74255741,74253297	74291935,74263477,74260944,74256853,74255775,74253665	Gene ID= ENSG00000166347.18 TPM= 98.78 Transcript Type= protein_coding
chr18	74496208	74523454	74496208	74523454	+	ENST00000324262.8@CNDP2	ENST00000324262.8	protein_coding	74496208,74499882,74501329,74505849,74508840,74510813,74512448,74513559,74516228,74518499,74518949,74519999	74496431,74500033,74501472,74506011,74508928,74511013,74512532,74513719,74516392,74518640,74519096,74523454	Gene ID= ENSG00000133313.14 TPM= 79.66 Transcript Type= protein_coding
chr18	74496306	74521128	74496306	74521128	+	transcript1774.chr18.nic@CNDP2	transcript1774.chr18.nic	protein_coding	74496306,74499882,74501329,74505849,74508840,74510813,74512448,74513559,74516228,74518499,74519999	74496431,74500033,74501472,74506011,74508928,74511013,74512532,74513719,74516392,74519096,74521128	Gene ID= ENSG00000133313.14 TPM= 7.44 Transcript Type= NA
chr18	74496307	74521131	74496307	74521131	+	ENST00000579847.5@CNDP2	ENST00000579847.5	protein_coding	74496307,74499937,74501329,74505849,74508840,74510813,74512448,74513559,74516228,74518499,74518949,74519999	74496431,74500033,74501472,74506011,74508928,74511013,74512532,74513719,74516392,74518640,74519096,74521131	Gene ID= ENSG00000133313.14 TPM= 32.93 Transcript Type= protein_coding
chr18	74591774	74597824	74591774	74597824	-	ENST00000580048.1@LINC00909	ENST00000580048.1	lincRNA	74596428,74591774	74597824,74593839	Gene ID= ENSG00000264247.1 TPM= 4.25 Transcript Type= lincRNA
chr18	74597870	74804627	74597870	74804627	+	ENST00000582337.5@ZNF407	ENST00000582337.5	protein_coding	74597870,74630967,74641008,74781428,74803964	74597937,74635706,74641122,74781502,74804627	Gene ID= ENSG00000215421.9 TPM= 1.06 Transcript Type= protein_coding
chr18	75210755	75289950	75210755	75289950	+	ENST00000322038.5@TSHZ1	ENST00000322038.5	protein_coding	75210755,75285448	75211243,75289950	Gene ID= ENSG00000179981.9 TPM= 7.44 Transcript Type= protein_coding
chr18	76358190	76495190	76358190	76495190	-	ENST00000443185.6@ZNF516	ENST00000443185.6	protein_coding	76495144,76463028,76441245,76378855,76371467,76370528,76358190	76495190,76463141,76443211,76380303,76371571,76370595,76362557	Gene ID= ENSG00000101493.10 TPM= 13.81 Transcript Type= protein_coding
chr18	76472398	76473377	76472398	76473377	+	transcript1809.chr18.nnic@NA	transcript1809.chr18.nnic	NA	76472398	76473377	Gene ID= novel_gene_chr18_1810 TPM= 3.19 Transcript Type= NA
chr18	76822782	76881482	76822782	76881482	+	transcript1813.chr18.nnic@ZNF236	transcript1813.chr18.nnic	protein_coding	76822782,76824245,76849526,76851775,76868685,76871701,76875492,76878009,76880113,76881284	76823349,76824406,76849668,76851939,76868863,76871825,76875664,76878152,76880316,76881482	Gene ID= ENSG00000130856.15 TPM= 3.19 Transcript Type= NA
chr18	76978834	77087502	76978834	77087502	-	transcript1821.chr18.nic@MBP	transcript1821.chr18.nic	protein_coding	77087346,77066298,77016832,76989956,76988877,76984775,76978834	77087502,77066385,77017268,76990060,76988912,76984894,76980471	Gene ID= ENSG00000197971.14 TPM= 5.31 Transcript Type= NA
chr18	77012779	77132769	77012779	77132769	-	ENST00000397860.7@MBP	ENST00000397860.7	protein_coding	77132580,77105211,77066298,77012779	77132769,77105286,77066385,77017268	Gene ID= ENSG00000197971.14 TPM= 11.68 Transcript Type= protein_coding
chr18	79069408	79116082	79069408	79116082	+	ENST00000586722.5@ATP9B	ENST00000586722.5	protein_coding	79069408,79096476,79110355,79113241,79114994	79069529,79096649,79110505,79113354,79116082	Gene ID= ENSG00000166377.19 TPM= 2.12 Transcript Type= protein_coding
chr18	79395930	79470014	79395930	79470014	+	ENST00000591814.5@NFATC1	ENST00000591814.5	protein_coding	79395930,79410403,79433579,79448782,79450954,79451676,79461311,79467450	79396351,79411501,79433738,79448984,79451126,79451816,79461366,79470014	Gene ID= ENSG00000131196.17 TPM= 7.44 Transcript Type= protein_coding
chr18	79435354	79436978	79435354	79436978	-	transcript1846.chr18.nnic@NA	transcript1846.chr18.nnic	NA	79435354	79436978	Gene ID= novel_gene_chr18_1847 TPM= 2.12 Transcript Type= NA
chr18	79677287	79679358	79677287	79679358	-	ENST00000616428.1@AC068473.5	ENST00000616428.1	lincRNA	79677287	79679358	Gene ID= ENSG00000274828.1 TPM= 6.37 Transcript Type= lincRNA
chr18	79902465	79951674	79902465	79951674	-	transcript1859.chr18.nnic@PQLC1	transcript1859.chr18.nnic	protein_coding	79951581,79950724,79949519,79943329,79933969,79919184,79916224,79915387,79902465	79951674,79951025,79949655,79943462,79934022,79919400,79916479,79915694,79904183	Gene ID= ENSG00000122490.18 TPM= 3.72 Transcript Type= NA
chr18	79902420	79951674	79902420	79951674	-	transcript1863.chr18.nic@PQLC1	transcript1863.chr18.nic	protein_coding	79951581,79950724,79949519,79943329,79933969,79919184,79902420	79951674,79951025,79949655,79943462,79934022,79919400,79904183	Gene ID= ENSG00000122490.18 TPM= 5.84 Transcript Type= NA
chr18	79902420	79951674	79902420	79951674	-	transcript1866.chr18.nic@PQLC1	transcript1866.chr18.nic	protein_coding	79951581,79950724,79943329,79930228,79919184,79902420	79951674,79951025,79943462,79930311,79919400,79904183	Gene ID= ENSG00000122490.18 TPM= 4.78 Transcript Type= NA
chr18	79902423	79951674	79902423	79951674	-	transcript1874.chr18.nnic@PQLC1	transcript1874.chr18.nnic	protein_coding	79951581,79950724,79943329,79933969,79902423	79951674,79951025,79943462,79934022,79904183	Gene ID= ENSG00000122490.18 TPM= 4.78 Transcript Type= NA
chr18	79902420	79951664	79902420	79951664	-	ENST00000397778.6@PQLC1	ENST00000397778.6	protein_coding	79951581,79950724,79943329,79933969,79919184,79902420	79951664,79951025,79943462,79934022,79919400,79904183	Gene ID= ENSG00000122490.18 TPM= 18.59 Transcript Type= protein_coding
chr18	79902420	79951638	79902420	79951638	-	ENST00000357575.8@PQLC1	ENST00000357575.8	protein_coding	79951581,79950724,79943329,79919184,79902420	79951638,79951025,79943462,79919400,79904183	Gene ID= ENSG00000122490.18 TPM= 13.28 Transcript Type= protein_coding
chr18	79964561	79970822	79964561	79970822	+	ENST00000451882.2@HSBP1L1	ENST00000451882.2	protein_coding	79964561,79966612,79968089,79970440	79964786,79966678,79968183,79970822	Gene ID= ENSG00000226742.3 TPM= 7.44 Transcript Type= protein_coding
chr18	79973513	79988571	79973513	79988571	-	transcript1891.chr18.nic@TXNL4A	transcript1891.chr18.nic	protein_coding	79988240,79986602,79977598,79973513	79988571,79986750,79977701,79973856	Gene ID= ENSG00000141759.14 TPM= 7.44 Transcript Type= NA
chr18	79970811	79988593	79970811	79988593	-	ENST00000269601.9@TXNL4A	ENST00000269601.9	protein_coding	79988240,79977598,79970811	79988593,79977701,79973856	Gene ID= ENSG00000141759.14 TPM= 25.49 Transcript Type= protein_coding
chr18	79973407	79988541	79973407	79988541	-	ENST00000588162.1@TXNL4A	ENST00000588162.1	protein_coding	79988240,79973407	79988541,79973856	Gene ID= ENSG00000141759.14 TPM= 2.12 Transcript Type= protein_coding
chr18	79973525	79988536	79973525	79988536	-	ENST00000355491.5@TXNL4A	ENST00000355491.5	protein_coding	79988240,79977598,79976718,79973525	79988536,79977701,79976787,79973856	Gene ID= ENSG00000141759.14 TPM= 3.19 Transcript Type= nonsense_mediated_decay
chr18	79973534	79988581	79973534	79988581	-	ENST00000585769.5@TXNL4A	ENST00000585769.5	protein_coding	79988240,79986602,79977598,79976718,79973534	79988581,79986750,79977701,79976787,79973856	Gene ID= ENSG00000141759.14 TPM= 1.06 Transcript Type= nonsense_mediated_decay
chr18	80021826	80024198	80021826	80024198	+	transcript1899.chr18.nnic@NA	transcript1899.chr18.nnic	NA	80021826	80024198	Gene ID= novel_gene_chr18_1900 TPM= 2.12 Transcript Type= NA
chr18	80034358	80046392	80034358	80046392	+	ENST00000306735.9@RBFA	ENST00000306735.9	protein_coding	80034358,80036668,80037330,80038505,80042135,80044212,80045774	80034653,80036710,80037506,80038617,80042219,80044285,80046392	Gene ID= ENSG00000101546.12 TPM= 37.71 Transcript Type= protein_coding
chr18	80034466	80046397	80034466	80046397	+	ENST00000262197.7@RBFA	ENST00000262197.7	protein_coding	80034466,80036668,80037330,80038505,80044212,80045774	80034653,80036710,80037506,80038617,80044285,80046397	Gene ID= ENSG00000101546.12 TPM= 5.84 Transcript Type= protein_coding
chr19	405438	409170	405438	409170	-	ENST00000332235.7@C2CD4C	ENST00000332235.7	protein_coding	409006,405438	409170,408401	Gene ID= ENSG00000183186.7 TPM= 15.93 Transcript Type= protein_coding
chr19	416589	461083	416589	461083	-	transcript11.chr19.nic@SHC2	transcript11.chr19.nic	protein_coding	460529,440862,438970,438718,436380,436165,434709,430684,425097,422146,418923,416589	461083,440932,439030,438837,436683,436291,434865,430747,425231,422456,419056,417322	Gene ID= ENSG00000129946.10 TPM= 13.28 Transcript Type= NA
chr19	416583	460996	416583	460996	-	ENST00000264554.10@SHC2	ENST00000264554.10	protein_coding	460529,440862,438970,438718,436630,436380,436165,434709,430684,425097,422146,418923,416583	460996,440932,439030,438837,436683,436431,436291,434865,430747,425231,422456,419056,417322	Gene ID= ENSG00000129946.10 TPM= 37.71 Transcript Type= protein_coding
chr19	489176	505342	489176	505342	+	ENST00000587541.5@MADCAM1	ENST00000587541.5	protein_coding	489176,501669,504745	490039,501929,505342	Gene ID= ENSG00000099866.14 TPM= 1.06 Transcript Type= protein_coding
chr19	507497	519654	507497	519654	+	ENST00000359315.6@TPGS1	ENST00000359315.6	protein_coding	507497,518889	507844,519654	Gene ID= ENSG00000141933.9 TPM= 62.67 Transcript Type= protein_coding
chr19	507500	510372	507500	510372	+	ENST00000588278.1@TPGS1	ENST00000588278.1	protein_coding	507500	510372	Gene ID= ENSG00000141933.9 TPM= 1.06 Transcript Type= retained_intron
chr19	531688	539036	531688	539036	+	transcript18.chr19.nnic@CDC34	transcript18.chr19.nnic	protein_coding	531688,535837,536243,537013,538678	532108,535923,536340,537147,539036	Gene ID= ENSG00000099804.8 TPM= 12.75 Transcript Type= NA
chr19	531721	542092	531721	542092	+	transcript21.chr19.nnic@CDC34	transcript21.chr19.nnic	protein_coding	531721,536243,537013,541339	532108,536340,537147,542092	Gene ID= ENSG00000099804.8 TPM= 52.58 Transcript Type= NA
chr19	532032	542092	532032	542092	+	ENST00000586283.6@CDC34	ENST00000586283.6	protein_coding	532032,535837,536243,537013,541343	532108,535923,536340,537147,542092	Gene ID= ENSG00000099804.8 TPM= 10.09 Transcript Type= protein_coding
chr19	537303	538646	537303	538646	+	transcript27.chr19.nnic@NA	transcript27.chr19.nnic	NA	537303	538646	Gene ID= novel_gene_chr19_28 TPM= 5.31 Transcript Type= NA
chr19	538939	542087	538939	542087	+	transcript25.chr19.nnic@NA	transcript25.chr19.nnic	NA	538939	542087	Gene ID= novel_gene_chr19_26 TPM= 9.56 Transcript Type= NA
chr19	572565	583490	572565	583490	+	ENST00000333511.7@BSG	ENST00000333511.7	protein_coding	572565,577774,579500,580379,580646,581315,582306,582514,582750	572701,578121,579656,580461,580782,581591,582330,582582,583490	Gene ID= ENSG00000172270.18 TPM= 97.96 Transcript Type= protein_coding
chr19	572578	583493	572578	583493	+	ENST00000353555.8@BSG	ENST00000353555.8	protein_coding	572578,579500,580379,580646,581315,582306,582514,582750	572701,579656,580461,580782,581591,582330,582582,583493	Gene ID= ENSG00000172270.18 TPM= 1788.31 Transcript Type= protein_coding
chr19	572619	583487	572619	583487	+	ENST00000618006.4@BSG	ENST00000618006.4	protein_coding	572619,580646,581315,582306,582514,582750	572701,580782,581591,582330,582582,583487	Gene ID= ENSG00000172270.18 TPM= 53.16 Transcript Type= protein_coding
chr19	617224	633604	617224	633604	-	ENST00000588649.6@POLRMT	ENST00000588649.6	protein_coding	633425,632834,629540,625124,624719,623454,622821,622582,622149,621058,620365,619958,619586,619210,618997,618705,618488,617777,617570,617419,617224	633604,632938,630168,625254,624905,623603,622985,622752,622373,621846,620487,620080,619765,619296,619110,618760,618586,617849,617655,617480,617323	Gene ID= ENSG00000099821.13 TPM= 122.15 Transcript Type= protein_coding
chr19	617224	633566	617224	633566	-	transcript70.chr19.nic@POLRMT	transcript70.chr19.nic	protein_coding	633425,632834,629540,625124,624719,623454,622821,622582,622149,621058,620365,619958,619586,619210,618997,618705,618488,617570,617419,617224	633566,632938,630168,625254,624905,623603,622985,622752,622373,621846,620487,620080,619765,619296,619110,618760,618586,617849,617480,617323	Gene ID= ENSG00000099821.13 TPM= 14.87 Transcript Type= NA
chr19	644359	647644	644359	647644	-	transcript90.chr19.nnic@NA	transcript90.chr19.nnic	NA	644359	647644	Gene ID= novel_gene_chr19_91 TPM= 3.19 Transcript Type= NA
chr19	647526	663277	647526	663277	-	ENST00000292363.9@RNF126	ENST00000292363.9	protein_coding	663047,652826,652233,651611,650234,649679,648882,648372,647526	663277,652884,652296,651855,650296,649748,648975,648487,648277	Gene ID= ENSG00000070423.17 TPM= 75.59 Transcript Type= protein_coding
chr19	647529	663218	647529	663218	-	transcript77.chr19.nnic@RNF126	transcript77.chr19.nnic	protein_coding	663047,652826,652233,651611,650234,649679,648882,648372,647529	663218,652884,652296,651855,650296,649748,649052,648487,648277	Gene ID= ENSG00000070423.17 TPM= 11.33 Transcript Type= NA
chr19	647529	663214	647529	663214	-	transcript87.chr19.nnic@RNF126	transcript87.chr19.nnic	protein_coding	663047,650234,649679,648882,648372,647529	663214,650296,649748,648975,648487,648277	Gene ID= ENSG00000070423.17 TPM= 12.93 Transcript Type= NA
chr19	676594	683392	676594	683392	+	transcript95.chr19.nnic@FSTL3	transcript95.chr19.nnic	protein_coding	676594,677792,680274,681333,681650	676688,677977,680489,681560,683392	Gene ID= ENSG00000070404.9 TPM= 74 Transcript Type= NA
chr19	678500	683392	678500	683392	+	transcript97.chr19.nic@FSTL3	transcript97.chr19.nic	protein_coding	678500,681333,681650	680489,681560,683392	Gene ID= ENSG00000070404.9 TPM= 43.73 Transcript Type= NA
chr19	680707	683392	680707	683392	+	ENST00000592947.5@FSTL3	ENST00000592947.5	protein_coding	680707,681333,681650	680879,681560,683392	Gene ID= ENSG00000070404.9 TPM= 71.35 Transcript Type= protein_coding
chr19	676365	683399	676365	683399	+	ENST00000166139.8@FSTL3	ENST00000166139.8	protein_coding	676365,677792,680274,681333,681650	676526,677977,680489,681560,683399	Gene ID= ENSG00000070404.9 TPM= 159.32 Transcript Type= protein_coding
chr19	709101	748329	709101	748329	+	ENST00000338448.9@PALM	ENST00000338448.9	protein_coding	709101,726138,727008,727564,731095,734173,736019,740352,746285	709151,726189,727088,727694,731245,734194,736078,740483,748329	Gene ID= ENSG00000099864.17 TPM= 14.87 Transcript Type= protein_coding
chr19	797075	812327	797075	812327	+	ENST00000356948.10@PTBP1	ENST00000356948.10	protein_coding	797075,799413,803561,804036,804292,804532,804829,805013,805492,806408,807869,808360,808546,810543,810694	797505,799443,803636,804208,804438,804702,804939,805187,805569,806556,807902,808452,808762,810620,812327	Gene ID= ENSG00000011304.19 TPM= 24.96 Transcript Type= protein_coding
chr19	798362	812312	798362	812312	+	transcript110.chr19.nic@PTBP1	transcript110.chr19.nic	protein_coding	798362,799413,803561,804036,804292,804532,804829,805013,805492,806408,807869,808360,808546,810543,810694	798545,799443,803636,804208,804438,804702,804939,805187,805569,806556,807902,808452,808762,810620,812312	Gene ID= ENSG00000011304.19 TPM= 15.4 Transcript Type= NA
chr19	797425	812312	797425	812312	+	ENST00000349038.8@PTBP1	ENST00000349038.8	protein_coding	797425,799413,803561,804036,804292,804532,804829,805013,806408,807869,808360,808546,810543,810694	797505,799443,803636,804208,804438,804702,804939,805187,806556,807902,808452,808762,810620,812312	Gene ID= ENSG00000011304.19 TPM= 12.75 Transcript Type= protein_coding
chr19	867630	893218	867630	893218	-	ENST00000395808.7@MED16	ENST00000395808.7	protein_coding	893086,890963,890137,889638,885770,884903,881559,879937,876974,875244,873449,871926,871037,868863,867630	893218,891149,890244,889807,886201,885008,881714,880148,877180,875454,873582,872118,871253,868946,868499	Gene ID= ENSG00000175221.14 TPM= 23.37 Transcript Type= protein_coding
chr19	896504	913245	896504	913245	-	ENST00000587975.2@R3HDM4	ENST00000587975.2	protein_coding	913087,901976,901422,900829,900061,899601,899440,896504	913245,902067,901546,900952,900146,899686,899495,897540	Gene ID= ENSG00000198858.9 TPM= 15.93 Transcript Type= protein_coding
chr19	896503	913231	896503	913231	-	ENST00000361574.9@R3HDM4	ENST00000361574.9	protein_coding	913087,901976,901422,900829,900061,899601,899440,896503	913231,902130,901546,900952,900146,899686,899495,897540	Gene ID= ENSG00000198858.9 TPM= 31.86 Transcript Type= protein_coding
chr19	984271	994570	984271	994570	+	ENST00000585809.5@WDR18	ENST00000585809.5	protein_coding	984271,985865,989762,990223,990852,991081,991227,991955,994020,994213	984563,985975,989895,990364,990995,991145,991351,992121,994088,994570	Gene ID= ENSG00000065268.10 TPM= 63.73 Transcript Type= protein_coding
chr19	984332	994557	984332	994557	+	ENST00000587001.6@WDR18	ENST00000587001.6	protein_coding	984332,985865,989762,990223,990852,991081,991227,991955,994213	984563,985975,989895,990364,990995,991145,991351,992121,994557	Gene ID= ENSG00000065268.10 TPM= 4.25 Transcript Type= protein_coding
chr19	1009650	1021174	1009650	1021174	-	transcript148.chr19.nic@TMEM259	transcript148.chr19.nic	protein_coding	1020772,1014192,1013241,1012463,1012066,1011892,1011741,1011580,1011367,1011096,1009650	1021174,1014473,1013340,1012573,1012188,1011992,1011798,1011612,1011499,1011195,1010895	Gene ID= ENSG00000182087.12 TPM= 39.18 Transcript Type= NA
chr19	1009648	1021179	1009648	1021179	-	ENST00000356663.7@TMEM259	ENST00000356663.7	protein_coding	1020772,1014192,1013241,1012463,1012066,1011892,1011741,1011580,1011367,1011096,1009648	1021179,1014473,1013340,1012573,1012188,1011992,1011798,1011663,1011499,1011195,1010895	Gene ID= ENSG00000182087.12 TPM= 160.51 Transcript Type= protein_coding
chr19	1009650	1021174	1009650	1021174	-	transcript161.chr19.nic@TMEM259	transcript161.chr19.nic	protein_coding	1020772,1014192,1013241,1012066,1011892,1011741,1011580,1011367,1011096,1009650	1021174,1014473,1013340,1012573,1011992,1011798,1011612,1011499,1011195,1010895	Gene ID= ENSG00000182087.12 TPM= 25.38 Transcript Type= NA
chr19	1009650	1021174	1009650	1021174	-	transcript163.chr19.nic@TMEM259	transcript163.chr19.nic	protein_coding	1020772,1014192,1013241,1012066,1011892,1011741,1011580,1011367,1011096,1009650	1021174,1014473,1013340,1012573,1011992,1011798,1011663,1011499,1011195,1010895	Gene ID= ENSG00000182087.12 TPM= 50.65 Transcript Type= NA
chr19	1009650	1021174	1009650	1021174	-	transcript164.chr19.nic@TMEM259	transcript164.chr19.nic	protein_coding	1020772,1014192,1013241,1012463,1012066,1011892,1011741,1011367,1011096,1009650	1021174,1014473,1013340,1012573,1012188,1011992,1011798,1011612,1011195,1010895	Gene ID= ENSG00000182087.12 TPM= 17.41 Transcript Type= NA
chr19	1009650	1021174	1009650	1021174	-	transcript166.chr19.nic@TMEM259	transcript166.chr19.nic	protein_coding	1020772,1014192,1013241,1012463,1012066,1011892,1011741,1011580,1011096,1009650	1021174,1014473,1013340,1012573,1012188,1011992,1011798,1011663,1011499,1010895	Gene ID= ENSG00000182087.12 TPM= 36.37 Transcript Type= NA
chr19	1009650	1021174	1009650	1021174	-	transcript176.chr19.nic@TMEM259	transcript176.chr19.nic	protein_coding	1020772,1014192,1013241,1012066,1011892,1011741,1011580,1011096,1009650	1021174,1014473,1013340,1012573,1011992,1011798,1011663,1011499,1010895	Gene ID= ENSG00000182087.12 TPM= 30 Transcript Type= NA
chr19	1009650	1021174	1009650	1021174	-	transcript181.chr19.nic@TMEM259	transcript181.chr19.nic	protein_coding	1020772,1014192,1013241,1012066,1011892,1011580,1011096,1009650	1021174,1014473,1013340,1012573,1011992,1011798,1011499,1010895	Gene ID= ENSG00000182087.12 TPM= 18.31 Transcript Type= NA
chr19	1016286	1019004	1016286	1019004	+	transcript189.chr19.nnic@NA	transcript189.chr19.nnic	NA	1016286	1019004	Gene ID= novel_gene_chr19_190 TPM= 2.12 Transcript Type= NA
chr19	1026581	1039068	1026581	1039068	+	ENST00000263097.8@CNN2	ENST00000263097.8	protein_coding	1026581,1031071,1032392,1032559,1036130,1036416,1037625	1026724,1031192,1032458,1032696,1036246,1036562,1039068	Gene ID= ENSG00000064666.14 TPM= 41.42 Transcript Type= protein_coding
chr19	1026610	1039068	1026610	1039068	+	ENST00000348419.7@CNN2	ENST00000348419.7	protein_coding	1026610,1031071,1032392,1032559,1036416,1037625	1026724,1031192,1032458,1032696,1036562,1039068	Gene ID= ENSG00000064666.14 TPM= 15.93 Transcript Type= protein_coding
chr19	1040103	1065569	1040103	1065569	+	ENST00000263094.10@ABCA7	ENST00000263094.10	protein_coding	1040103,1041225,1041510,1041831,1042064,1042315,1042746,1043041,1043334,1043725,1044577,1045002,1046230,1046802,1047157,1047453,1048895,1049266,1050921,1051155,1051449,1051942,1052214,1053329,1053788,1054006,1054193,1054570,1054780,1055097,1055907,1056066,1056330,1056907,1057314,1057915,1058146,1058618,1058820,1059023,1061782,1062172,1063544,1063760,1064161,1064931,1065270	1040196,1041427,1041603,1041972,1042176,1042397,1042826,1043251,1043473,1043841,1044744,1045231,1046406,1047024,1047378,1047654,1049005,1049437,1051052,1051294,1051586,1052126,1052286,1053531,1053836,1054110,1054341,1054694,1054878,1055351,1055939,1056243,1056499,1057084,1057429,1058059,1058269,1058747,1058940,1059085,1061888,1062313,1063678,1063863,1064253,1065171,1065569	Gene ID= ENSG00000064687.12 TPM= 23.37 Transcript Type= protein_coding
chr19	1067166	1086628	1067166	1086628	+	ENST00000313093.6@ARHGAP45	ENST00000313093.6	protein_coding	1067166,1068414,1073149,1073506,1073674,1073948,1074104,1074343,1074614,1074799,1077857,1079703,1079928,1080255,1080464,1080682,1080892,1081550,1081824,1082840,1083143,1084238,1085660	1067495,1068744,1073292,1073590,1073746,1074014,1074241,1074407,1074724,1074879,1078045,1079840,1080118,1080379,1080547,1080786,1081064,1081738,1081961,1083066,1083353,1084346,1086628	Gene ID= ENSG00000180448.10 TPM= 5.31 Transcript Type= protein_coding
chr19	1085109	1087510	1085109	1087510	-	transcript208.chr19.nnic@NA	transcript208.chr19.nnic	NA	1085109	1087510	Gene ID= novel_gene_chr19_209 TPM= 3.19 Transcript Type= NA
chr19	1088148	1095375	1088148	1095375	-	ENST00000589737.5@POLR2E	ENST00000589737.5	protein_coding	1095259,1091792,1090908,1090087,1089884,1089472,1088148	1095375,1091907,1090988,1090145,1089962,1089551,1088720	Gene ID= ENSG00000099817.11 TPM= 20.89 Transcript Type= nonsense_mediated_decay
chr19	1088163	1095374	1088163	1095374	-	ENST00000215587.11@POLR2E	ENST00000215587.11	protein_coding	1095259,1093904,1091792,1090908,1090087,1089884,1089472,1088163	1095374,1094078,1091907,1090988,1090145,1089962,1089573,1088720	Gene ID= ENSG00000099817.11 TPM= 303.78 Transcript Type= nonsense_mediated_decay
chr19	1103937	1106790	1103937	1106790	+	ENST00000354171.12@GPX4	ENST00000354171.12	protein_coding	1103937,1105186,1105366,1105658,1106242,1106400,1106540	1104127,1105280,1105510,1105809,1106266,1106459,1106790	Gene ID= ENSG00000167468.16 TPM= 76.66 Transcript Type= protein_coding
chr19	1104052	1106779	1104052	1106779	+	ENST00000611653.4@GPX4	ENST00000611653.4	protein_coding	1104052,1105186,1105366,1105658,1106242,1106400,1106540	1104127,1105280,1105510,1105809,1106266,1106459,1106779	Gene ID= ENSG00000167468.16 TPM= 192.52 Transcript Type= protein_coding
chr19	1104073	1106788	1104073	1106788	+	ENST00000588919.5@GPX4	ENST00000588919.5	protein_coding	1104073,1105186,1105366,1105658,1106242,1106378,1106540	1104127,1105280,1105510,1105809,1106266,1106459,1106788	Gene ID= ENSG00000167468.16 TPM= 7.25 Transcript Type= protein_coding
chr19	1104650	1106787	1104650	1106787	+	ENST00000622390.4@GPX4	ENST00000622390.4	protein_coding	1104650,1105186,1105366,1105406,1105658,1106242,1106400,1106540	1104929,1105280,1105402,1105510,1105809,1106266,1106459,1106787	Gene ID= ENSG00000167468.16 TPM= 29.66 Transcript Type= protein_coding
chr19	1107636	1174283	1107636	1174283	-	ENST00000361757.7@SBNO2	ENST00000361757.7	protein_coding	1174172,1154184,1149369,1147309,1127604,1123942,1123534,1122894,1122658,1122468,1122139,1119906,1119516,1119011,1117323,1116829,1116021,1114231,1113535,1112818,1112402,1112189,1111996,1111506,1111019,1110745,1109683,1109506,1109292,1109135,1108779,1107636	1174283,1154402,1149442,1147420,1127765,1124022,1123639,1123045,1122791,1122558,1122282,1120023,1119621,1119164,1117499,1116926,1116103,1114422,1113704,1112949,1112537,1112301,1112067,1111614,1111093,1110888,1109777,1109598,1109423,1109211,1108969,1108704	Gene ID= ENSG00000064932.15 TPM= 12.21 Transcript Type= protein_coding
chr19	1107637	1132221	1107637	1132221	-	ENST00000438103.6@SBNO2	ENST00000438103.6	protein_coding	1132090,1127604,1123942,1123534,1122894,1122658,1122468,1122139,1119906,1119516,1119011,1117323,1116829,1116021,1114231,1113535,1112818,1112402,1112189,1111996,1111506,1111019,1110745,1109683,1109506,1109292,1109135,1108779,1107637	1132221,1127765,1124022,1123639,1123045,1122791,1122558,1122282,1120023,1119621,1119164,1117499,1116926,1116103,1114422,1113704,1112949,1112537,1112301,1112067,1111614,1111093,1110888,1109777,1109598,1109423,1109211,1108969,1108704	Gene ID= ENSG00000064932.15 TPM= 13.28 Transcript Type= protein_coding
chr19	1133674	1135067	1133674	1135067	+	transcript228.chr19.nnic@NA	transcript228.chr19.nnic	NA	1133674	1135067	Gene ID= novel_gene_chr19_229 TPM= 5.31 Transcript Type= NA
chr19	1205720	1228095	1205720	1228095	+	transcript232.chr19.nic@STK11	transcript232.chr19.nic	protein_coding	1205720,1218417,1219324,1220373,1220581,1221213,1221949,1222985,1226454,1226603,1227593	1207203,1218500,1219413,1220505,1220717,1221340,1222006,1223172,1226600,1226663,1228095	Gene ID= ENSG00000118046.14 TPM= 106.66 Transcript Type= NA
chr19	1205720	1228095	1205720	1228095	+	transcript241.chr19.nic@STK11	transcript241.chr19.nic	protein_coding	1205720,1218417,1219324,1220373,1221213,1221949,1222985,1226454,1226603,1227593	1207203,1218500,1219413,1220717,1221340,1222006,1223172,1226600,1226663,1228095	Gene ID= ENSG00000118046.14 TPM= 7.52 Transcript Type= NA
chr19	1206464	1228435	1206464	1228435	+	ENST00000326873.11@STK11	ENST00000326873.11	protein_coding	1206464,1218417,1219324,1220373,1220581,1221213,1221949,1222985,1226454,1227593	1207203,1218500,1219413,1220505,1220717,1221340,1222006,1223172,1226663,1228435	Gene ID= ENSG00000118046.14 TPM= 21.86 Transcript Type= protein_coding
chr19	1225134	1228094	1225134	1228094	+	transcript251.chr19.nnic@NA	transcript251.chr19.nnic	NA	1225134	1228094	Gene ID= novel_gene_chr19_252 TPM= 4.25 Transcript Type= NA
chr19	1228292	1231152	1228292	1231152	-	transcript250.chr19.nic@CBARP	transcript250.chr19.nic	protein_coding	1231101,1228292	1231152,1230142	Gene ID= ENSG00000099625.12 TPM= 10.62 Transcript Type= NA
chr19	1241746	1244825	1241746	1244825	+	ENST00000395633.5@ATP5D	ENST00000395633.5	protein_coding	1241746,1242456,1244097,1244315,1244737	1241991,1242609,1244185,1244440,1244825	Gene ID= ENSG00000099624.7 TPM= 613.93 Transcript Type= protein_coding
chr19	1241750	1244826	1241750	1244826	+	ENST00000215375.6@ATP5D	ENST00000215375.6	protein_coding	1241750,1242456,1244097,1244315	1241991,1242609,1244185,1244826	Gene ID= ENSG00000099624.7 TPM= 274.39 Transcript Type= protein_coding
chr19	1241817	1244825	1241817	1244825	+	ENST00000588538.5@ATP5D	ENST00000588538.5	protein_coding	1241817,1244097,1244315	1242609,1244185,1244825	Gene ID= ENSG00000099624.7 TPM= 7.44 Transcript Type= retained_intron
chr19	1244057	1244825	1244057	1244825	+	ENST00000589478.1@ATP5D	ENST00000589478.1	protein_coding	1244057,1244315	1244185,1244825	Gene ID= ENSG00000099624.7 TPM= 24.43 Transcript Type= retained_intron
chr19	1244058	1244825	1244058	1244825	+	ENST00000614837.1@ATP5D	ENST00000614837.1	protein_coding	1244058,1244315,1244737	1244185,1244440,1244825	Gene ID= ENSG00000099624.7 TPM= 55.94 Transcript Type= retained_intron
chr19	1248553	1259140	1248553	1259140	+	ENST00000300952.6@MIDN	ENST00000300952.6	protein_coding	1248553,1249890,1251562,1251839,1254167,1254902,1255422,1256995	1248660,1250529,1251649,1251901,1254478,1255061,1255694,1259140	Gene ID= ENSG00000167470.12 TPM= 141.27 Transcript Type= protein_coding
chr19	1252547	1254402	1252547	1254402	-	transcript297.chr19.nnic@NA	transcript297.chr19.nnic	NA	1252547	1254402	Gene ID= novel_gene_chr19_298 TPM= 2.66 Transcript Type= NA
chr19	1254187	1256318	1254187	1256318	+	transcript293.chr19.nnic@NA	transcript293.chr19.nnic	NA	1254187	1256318	Gene ID= novel_gene_chr19_294 TPM= 4.78 Transcript Type= NA
chr19	1269328	1274810	1269328	1274810	+	transcript260.chr19.nic@CIRBP	transcript260.chr19.nic	protein_coding	1269328,1270928,1271140,1271329,1271551,1271981,1274307,1274649	1269410,1271036,1271246,1271467,1271632,1273715,1274440,1274810	Gene ID= ENSG00000099622.13 TPM= 8.82 Transcript Type= NA
chr19	1269330	1274810	1269330	1274810	+	transcript265.chr19.nic@CIRBP	transcript265.chr19.nic	protein_coding	1269330,1270928,1271140,1271329,1271551,1271981,1274649	1269410,1271036,1271246,1271467,1271632,1274440,1274810	Gene ID= ENSG00000099622.13 TPM= 32.18 Transcript Type= NA
chr19	1261821	1264698	1261821	1264698	+	ENST00000589161.1@CIRBP	ENST00000589161.1	protein_coding	1261821,1264253	1262143,1264698	Gene ID= ENSG00000099622.13 TPM= 2.12 Transcript Type= retained_intron
chr19	1266653	1273172	1266653	1273172	+	ENST00000586472.5@CIRBP	ENST00000586472.5	protein_coding	1266653,1270928,1271140,1271329,1271551,1271981,1272427	1266701,1271036,1271246,1271467,1271632,1272051,1273172	Gene ID= ENSG00000099622.13 TPM= 13.28 Transcript Type= protein_coding
chr19	1269337	1273172	1269337	1273172	+	ENST00000320936.9@CIRBP	ENST00000320936.9	protein_coding	1269337,1270928,1271140,1271329,1271551,1271981,1272427	1269410,1271036,1271246,1271467,1271632,1272051,1273172	Gene ID= ENSG00000099622.13 TPM= 235.27 Transcript Type= protein_coding
chr19	1269335	1274810	1269335	1274810	+	ENST00000587169.5@CIRBP	ENST00000587169.5	protein_coding	1269335,1270928,1271329,1271551,1271981,1274649	1269410,1271036,1271467,1271632,1274440,1274810	Gene ID= ENSG00000099622.13 TPM= 14.13 Transcript Type= nonsense_mediated_decay
chr19	1271982	1274806	1271982	1274806	+	ENST00000444172.6@CIRBP	ENST00000444172.6	protein_coding	1271982,1273494,1274307,1274649	1272051,1273715,1274440,1274806	Gene ID= ENSG00000099622.13 TPM= 47.58 Transcript Type= nonsense_mediated_decay
chr19	1356314	1378431	1356314	1378431	+	ENST00000591806.5@MUM1	ENST00000591806.5	protein_coding	1356314,1357009,1358394,1360136,1362250,1364509,1366305,1367160,1369265,1369596,1370642,1373072,1376519	1356449,1357094,1358464,1361032,1362351,1364579,1366381,1367220,1369340,1369646,1371078,1373160,1378431	Gene ID= ENSG00000160953.15 TPM= 19.65 Transcript Type= protein_coding
chr19	1357401	1361770	1357401	1361770	-	transcript327.chr19.nnic@NA	transcript327.chr19.nnic	NA	1357401	1361770	Gene ID= novel_gene_chr19_328 TPM= 7.44 Transcript Type= NA
chr19	1383631	1395589	1383631	1395589	+	ENST00000233627.13@NDUFS7	ENST00000233627.13	protein_coding	1383631,1387811,1388525,1388833,1390871,1391119,1393242,1395391	1383942,1387847,1388593,1388938,1391050,1391165,1393330,1395589	Gene ID= ENSG00000115286.19 TPM= 457.61 Transcript Type= protein_coding
chr19	1391842	1395584	1391842	1395584	+	ENST00000591358.1@NDUFS7	ENST00000591358.1	protein_coding	1391842	1395584	Gene ID= ENSG00000115286.19 TPM= 4.78 Transcript Type= retained_intron
chr19	1383900	1395589	1383900	1395589	+	ENST00000539480.5@NDUFS7	ENST00000539480.5	protein_coding	1383900,1387811,1388525,1388833,1390871,1391119,1393242,1394418	1383942,1387847,1388593,1388938,1391050,1391165,1393330,1395589	Gene ID= ENSG00000115286.19 TPM= 82.32 Transcript Type= protein_coding
chr19	1383904	1395581	1383904	1395581	+	ENST00000313408.11@NDUFS7	ENST00000313408.11	protein_coding	1383904,1387811,1388525,1388833,1390871,1391119,1393242	1383942,1387847,1388593,1388938,1391050,1391165,1395581	Gene ID= ENSG00000115286.19 TPM= 20.71 Transcript Type= protein_coding
chr19	1383900	1393877	1383900	1393877	+	ENST00000538662.5@NDUFS7	ENST00000538662.5	protein_coding	1383900,1387811,1388525,1388833,1390871,1393242	1383942,1387847,1388593,1388938,1391165,1393877	Gene ID= ENSG00000115286.19 TPM= 2.12 Transcript Type= retained_intron
chr19	1383918	1395584	1383918	1395584	+	ENST00000546172.7@NDUFS7	ENST00000546172.7	protein_coding	1383918,1386518,1387811,1388525,1388833,1390871,1391119,1393242,1395391	1383942,1386639,1387847,1388593,1388938,1391050,1391165,1393330,1395584	Gene ID= ENSG00000115286.19 TPM= 61.42 Transcript Type= nonsense_mediated_decay
chr19	1389884	1391770	1389884	1391770	-	transcript329.chr19.nnic@NA	transcript329.chr19.nnic	NA	1389884	1391770	Gene ID= novel_gene_chr19_330 TPM= 4.25 Transcript Type= NA
chr19	1397093	1401563	1397093	1401563	-	transcript344.chr19.nic@GAMT	transcript344.chr19.nic	protein_coding	1401296,1399524,1399128,1398916,1397093	1401563,1399938,1399195,1399026,1397499	Gene ID= ENSG00000130005.12 TPM= 9.56 Transcript Type= NA
chr19	1397811	1401570	1397811	1401570	-	ENST00000447102.8@GAMT	ENST00000447102.8	protein_coding	1401296,1399793,1399524,1399128,1397811	1401570,1399938,1399587,1399195,1399026	Gene ID= ENSG00000130005.12 TPM= 2.12 Transcript Type= protein_coding
chr19	1407537	1435683	1407537	1435683	+	transcript338.chr19.nic@DAZAP1	transcript338.chr19.nic	protein_coding	1407537,1417500,1418204,1418666,1421148,1422348,1428842,1429967,1430222,1432514,1434737	1407802,1417540,1418370,1418731,1421258,1422396,1428995,1429996,1430362,1432690,1435683	Gene ID= ENSG00000071626.16 TPM= 16.99 Transcript Type= NA
chr19	1415396	1419962	1415396	1419962	-	transcript355.chr19.nnic@NA	transcript355.chr19.nnic	NA	1415396	1419962	Gene ID= novel_gene_chr19_356 TPM= 10.62 Transcript Type= NA
chr19	1438358	1440494	1438358	1440494	+	ENST00000233609.8@RPS15	ENST00000233609.8	protein_coding	1438358,1438811,1440019,1440349	1438428,1438892,1440253,1440494	Gene ID= ENSG00000115268.9 TPM= 371.89 Transcript Type= protein_coding
chr19	1438419	1440494	1438419	1440494	+	ENST00000593052.5@RPS15	ENST00000593052.5	protein_coding	1438419,1438807,1440019,1440349	1438580,1438892,1440253,1440494	Gene ID= ENSG00000115268.9 TPM= 6.51 Transcript Type= protein_coding
chr19	1438401	1440494	1438401	1440494	+	ENST00000592623.5@RPS15	ENST00000592623.5	protein_coding	1438401,1440019,1440349	1438892,1440253,1440494	Gene ID= ENSG00000115268.9 TPM= 4.04 Transcript Type= protein_coding
chr19	1438386	1440494	1438386	1440494	+	ENST00000592588.6@RPS15	ENST00000592588.6	protein_coding	1438386,1438807,1440019,1440349	1438428,1438892,1440253,1440494	Gene ID= ENSG00000115268.9 TPM= 367.65 Transcript Type= protein_coding
chr19	1438421	1440494	1438421	1440494	+	ENST00000586096.3@RPS15	ENST00000586096.3	protein_coding	1438421,1438807,1440019	1438428,1438892,1440494	Gene ID= ENSG00000115268.9 TPM= 1.06 Transcript Type= protein_coding
chr19	1438406	1440494	1438406	1440494	+	ENST00000591804.6@RPS15	ENST00000591804.6	protein_coding	1438406,1438807,1439606,1440019,1440349	1438428,1438892,1439826,1440253,1440494	Gene ID= ENSG00000115268.9 TPM= 2.97 Transcript Type= protein_coding
chr19	1457664	1460911	1457664	1460911	-	transcript366.chr19.nnic@NA	transcript366.chr19.nnic	NA	1457664	1460911	Gene ID= novel_gene_chr19_367 TPM= 8.5 Transcript Type= NA
chr19	1457670	1458580	1457670	1458580	-	ENST00000591252.2@AC027307.2	ENST00000591252.2	antisense_RNA	1457670	1458580	Gene ID= ENSG00000267317.2 TPM= 2.12 Transcript Type= antisense_RNA
chr19	1474174	1479183	1474174	1479183	-	ENST00000592872.5@C19orf25	ENST00000592872.5	protein_coding	1479114,1478774,1474174	1479183,1478905,1475258	Gene ID= ENSG00000119559.15 TPM= 5.49 Transcript Type= protein_coding
chr19	1473948	1479556	1473948	1479556	-	ENST00000585675.5@C19orf25	ENST00000585675.5	protein_coding	1479163,1478774,1473948	1479556,1478905,1475258	Gene ID= ENSG00000119559.15 TPM= 15.58 Transcript Type= protein_coding
chr19	1461143	1479201	1461143	1479201	-	ENST00000588427.5@C19orf25	ENST00000588427.5	protein_coding	1479163,1478774,1461143	1479201,1478905,1461824	Gene ID= ENSG00000119559.15 TPM= 1.06 Transcript Type= protein_coding
chr19	1474168	1479181	1474168	1479181	-	ENST00000586564.5@C19orf25	ENST00000586564.5	protein_coding	1479140,1478774,1474168	1479181,1478905,1475258	Gene ID= ENSG00000119559.15 TPM= 18.24 Transcript Type= protein_coding
chr19	1478435	1479134	1478435	1479134	-	ENST00000589421.1@C19orf25	ENST00000589421.1	protein_coding	1479114,1478435	1479134,1478905	Gene ID= ENSG00000119559.15 TPM= 1.06 Transcript Type= retained_intron
chr19	1490747	1497927	1490747	1497927	+	ENST00000233596.7@REEP6	ENST00000233596.7	protein_coding	1490747,1495294,1495469,1496285,1497174	1491384,1495387,1495607,1496453,1497927	Gene ID= ENSG00000115255.10 TPM= 9.56 Transcript Type= protein_coding
chr19	1505018	1513250	1505018	1513250	-	transcript376.chr19.nic@ADAMTSL5	transcript376.chr19.nic	protein_coding	1512963,1511625,1510845,1510639,1510368,1510150,1508443,1507998,1507557,1507242,1506739,1506590,1505018	1513250,1511727,1510917,1510730,1510428,1510258,1508570,1508109,1507643,1507405,1506928,1506661,1506316	Gene ID= ENSG00000185761.10 TPM= 23.43 Transcript Type= NA
chr19	1505018	1513325	1505018	1513325	-	transcript391.chr19.nic@ADAMTSL5	transcript391.chr19.nic	protein_coding	1512963,1510845,1510639,1510368,1510150,1508443,1507998,1507557,1507242,1506739,1506590,1505018	1513325,1510917,1510730,1510428,1510258,1508570,1508109,1507643,1507405,1506928,1506661,1506316	Gene ID= ENSG00000185761.10 TPM= 8.21 Transcript Type= NA
chr19	1503922	1509279	1503922	1509279	-	transcript406.chr19.nnic@ADAMTSL5	transcript406.chr19.nnic	protein_coding	1508443,1507998,1507552,1507248,1506739,1506590,1503922	1509279,1508109,1507643,1507404,1506934,1506661,1506316	Gene ID= ENSG00000185761.10 TPM= 21.33 Transcript Type= NA
chr19	1506328	1509279	1506328	1509279	-	transcript411.chr19.nnic@ADAMTSL5	transcript411.chr19.nnic	protein_coding	1508443,1507998,1507552,1507248,1506328	1509279,1508109,1507643,1507404,1506934	Gene ID= ENSG00000185761.10 TPM= 24.96 Transcript Type= NA
chr19	1506455	1509279	1506455	1509279	-	transcript412.chr19.nnic@ADAMTSL5	transcript412.chr19.nnic	protein_coding	1508443,1507998,1507248,1506455	1509279,1508109,1507643,1506934	Gene ID= ENSG00000185761.10 TPM= 9.03 Transcript Type= NA
chr19	1576640	1592901	1576640	1592901	-	transcript429.chr19.nic@MBD3	transcript429.chr19.nic	protein_coding	1592618,1585055,1584540,1582622,1581092,1576640	1592901,1585214,1584677,1582712,1581269,1578538	Gene ID= ENSG00000071655.17 TPM= 24.43 Transcript Type= NA
chr19	1573596	1592801	1573596	1592801	-	ENST00000156825.5@MBD3	ENST00000156825.5	protein_coding	1592618,1585055,1584540,1582622,1581092,1578335,1573596	1592801,1585214,1584677,1582712,1581269,1578538,1578158	Gene ID= ENSG00000071655.17 TPM= 6.37 Transcript Type= protein_coding
chr19	1576678	1592708	1576678	1592708	-	ENST00000434436.7@MBD3	ENST00000434436.7	protein_coding	1592522,1585055,1584540,1582622,1581092,1578335,1576678	1592708,1585214,1584677,1582712,1581269,1578538,1578158	Gene ID= ENSG00000071655.17 TPM= 44.61 Transcript Type= protein_coding
chr19	1597172	1605490	1597172	1605490	-	ENST00000591899.7@UQCR11	ENST00000591899.7	protein_coding	1605360,1599412,1597172	1605490,1599560,1598215	Gene ID= ENSG00000127540.11 TPM= 64.79 Transcript Type= protein_coding
chr19	1598049	1605443	1598049	1605443	-	ENST00000593029.1@UQCR11	ENST00000593029.1	protein_coding	1605360,1602294,1599412,1598049	1605443,1602426,1599560,1598215	Gene ID= ENSG00000127540.11 TPM= 6.37 Transcript Type= processed_transcript
chr19	1815246	1827373	1815246	1827373	-	transcript450.chr19.nnic@REXO1	transcript450.chr19.nnic	protein_coding	1826878,1825839,1823572,1821519,1820256,1819934,1819018,1818706,1818482,1817700,1817219,1816696,1816431,1816225,1815246	1827373,1825943,1823787,1821685,1820395,1820055,1819131,1818845,1818597,1817780,1817328,1816813,1816569,1816347,1816154	Gene ID= ENSG00000079313.13 TPM= 3.19 Transcript Type= NA
chr19	1827648	1848715	1827648	1848715	-	transcript454.chr19.nic@REXO1	transcript454.chr19.nic	protein_coding	1848202,1827648	1848715,1828631	Gene ID= ENSG00000079313.13 TPM= 5.31 Transcript Type= NA
chr19	1815246	1848463	1815246	1848463	-	ENST00000170168.8@REXO1	ENST00000170168.8	protein_coding	1848202,1826878,1825839,1823572,1821519,1820264,1819934,1819018,1818706,1818482,1817707,1817219,1816698,1816431,1816225,1815246	1848463,1828631,1825943,1823785,1821682,1820395,1820057,1819131,1818843,1818595,1817780,1817329,1816813,1816569,1816345,1816154	Gene ID= ENSG00000079313.13 TPM= 30.8 Transcript Type= protein_coding
chr19	1852399	1863650	1852399	1863650	-	transcript466.chr19.nnic@KLF16	transcript466.chr19.nnic	protein_coding	1863041,1854696,1852399	1863650,1854760,1854645	Gene ID= ENSG00000129911.8 TPM= 5.31 Transcript Type= NA
chr19	1852399	1876192	1852399	1876192	-	transcript471.chr19.nnic@KLF16	transcript471.chr19.nnic	protein_coding	1876110,1852399	1876192,1854760	Gene ID= ENSG00000129911.8 TPM= 8.5 Transcript Type= NA
chr19	1874871	1876169	1874871	1876169	-	ENST00000565797.2@AC012615.1	ENST00000565797.2	lincRNA	1874871	1876169	Gene ID= ENSG00000261526.2 TPM= 7.44 Transcript Type= lincRNA
chr19	1876810	1885547	1876810	1885547	-	ENST00000292577.11@ABHD17A	ENST00000292577.11	protein_coding	1885352,1881235,1879921,1877508,1876810	1885547,1881804,1880115,1877687,1877425	Gene ID= ENSG00000129968.15 TPM= 175.26 Transcript Type= protein_coding
chr19	1876976	1885477	1876976	1885477	-	transcript464.chr19.nnic@ABHD17A	transcript464.chr19.nnic	protein_coding	1885352,1879921,1877508,1876976	1885477,1880115,1877687,1877425	Gene ID= ENSG00000129968.15 TPM= 23.02 Transcript Type= NA
chr19	1876976	1885464	1876976	1885464	-	transcript465.chr19.nic@ABHD17A	transcript465.chr19.nic	protein_coding	1885352,1881235,1877508,1876976	1885464,1881804,1880115,1877425	Gene ID= ENSG00000129968.15 TPM= 17.71 Transcript Type= NA
chr19	1905214	1926011	1905214	1926011	+	ENST00000316097.12@SCAMP4	ENST00000316097.12	protein_coding	1905214,1914979,1917694,1918127,1918889,1923070,1924108	1905439,1915026,1917822,1918283,1918990,1923187,1926011	Gene ID= ENSG00000227500.9 TPM= 14.87 Transcript Type= protein_coding
chr19	1905378	1913447	1905378	1913447	+	ENST00000329478.3@ADAT3	ENST00000329478.3	protein_coding	1905378,1911890	1905439,1913447	Gene ID= ENSG00000213638.5 TPM= 7.44 Transcript Type= protein_coding
chr19	1941149	1981338	1941149	1981338	+	ENST00000255641.12@CSNK1G2	ENST00000255641.12	protein_coding	1941149,1969508,1978305,1978442,1978602,1978859,1979163,1979319,1979495,1979752,1979911,1980149	1941418,1969959,1978345,1978511,1978750,1979093,1979248,1979403,1979643,1979835,1980017,1981338	Gene ID= ENSG00000133275.15 TPM= 58.42 Transcript Type= protein_coding
chr19	1971768	1974031	1971768	1974031	-	transcript488.chr19.nnic@NA	transcript488.chr19.nnic	NA	1971768	1974031	Gene ID= novel_gene_chr19_489 TPM= 9.56 Transcript Type= NA
chr19	1985438	2015724	1985438	2015724	-	ENST00000255608.8@BTBD2	ENST00000255608.8	protein_coding	2015297,1997344,1993020,1990717,1990004,1987500,1987166,1986830,1985438	2015724,1997463,1993176,1990822,1990201,1987692,1987253,1986976,1986649	Gene ID= ENSG00000133243.8 TPM= 114.18 Transcript Type= protein_coding
chr19	2037482	2051244	2037482	2051244	-	ENST00000250896.7@MKNK2	ENST00000250896.7	protein_coding	2051096,2050801,2046604,2046367,2046186,2043503,2043124,2042766,2042607,2042427,2041840,2041040,2040134,2037482	2051244,2050947,2046691,2046468,2046283,2043582,2043197,2042870,2042662,2042522,2042034,2041204,2040177,2039856	Gene ID= ENSG00000099875.14 TPM= 53.64 Transcript Type= protein_coding
chr19	2037465	2051248	2037465	2051248	-	transcript509.chr19.nic@MKNK2	transcript509.chr19.nic	protein_coding	2051096,2050801,2046367,2046186,2043503,2043124,2042766,2042607,2042427,2041840,2041040,2040134,2037465	2051248,2050947,2046691,2046283,2043582,2043197,2042870,2042662,2042522,2042034,2041204,2040177,2037829	Gene ID= ENSG00000099875.14 TPM= 14.52 Transcript Type= NA
chr19	2037482	2051248	2037482	2051248	-	transcript510.chr19.nic@MKNK2	transcript510.chr19.nic	protein_coding	2051096,2050801,2046367,2046186,2043503,2043124,2042766,2042607,2042427,2041840,2041040,2040134,2037482	2051248,2050947,2046691,2046283,2043582,2043197,2042870,2042662,2042522,2042034,2041204,2040177,2039856	Gene ID= ENSG00000099875.14 TPM= 50.45 Transcript Type= NA
chr19	2037465	2051248	2037465	2051248	-	transcript514.chr19.nic@MKNK2	transcript514.chr19.nic	protein_coding	2051096,2050801,2046367,2046186,2043503,2043124,2042607,2042427,2041840,2041040,2040134,2037465	2051248,2050947,2046691,2046283,2043582,2043197,2042870,2042522,2042034,2041204,2040177,2037829	Gene ID= ENSG00000099875.14 TPM= 4.96 Transcript Type= NA
chr19	2037465	2051224	2037465	2051224	-	ENST00000309340.11@MKNK2	ENST00000309340.11	protein_coding	2051096,2050801,2046604,2046367,2046186,2043503,2043124,2042766,2042607,2042427,2041840,2041040,2040134,2037465	2051224,2050947,2046691,2046468,2046283,2043582,2043197,2042870,2042662,2042522,2042034,2041204,2040177,2037829	Gene ID= ENSG00000099875.14 TPM= 31.51 Transcript Type= protein_coding
chr19	2071038	2096332	2071038	2096332	-	ENST00000357066.7@MOB3A	ENST00000357066.7	protein_coding	2096226,2085175,2078140,2076811,2071038	2096332,2085328,2078679,2077013,2073424	Gene ID= ENSG00000172081.13 TPM= 21.24 Transcript Type= protein_coding
chr19	2096869	2099590	2096869	2099590	+	ENST00000395301.7@IZUMO4	ENST00000395301.7	protein_coding	2096869,2097252,2097424,2097929,2098052,2098287,2098436,2098787,2098976,2099255	2097162,2097332,2097495,2097955,2098127,2098334,2098450,2098804,2099029,2099590	Gene ID= ENSG00000099840.13 TPM= 3.19 Transcript Type= protein_coding
chr19	2096943	2099584	2096943	2099584	+	ENST00000395296.5@IZUMO4	ENST00000395296.5	protein_coding	2096943,2097252,2097424,2097929,2098052,2098287,2098436,2099255	2097162,2097332,2097495,2097955,2098127,2098334,2098450,2099584	Gene ID= ENSG00000099840.13 TPM= 1.06 Transcript Type= protein_coding
chr19	2100995	2151565	2100995	2151565	-	transcript520.chr19.nnic@AP3D1	transcript520.chr19.nnic	protein_coding	2151239,2138619,2137727,2137011,2132471,2130408,2129318,2129090,2127152,2123830,2123358,2121734,2121163,2120862,2118601,2117222,2116605,2116207,2115538,2115219,2114748,2114125,2113336,2112860,2111679,2111285,2110707,2110136,2109873,2109086,2108687,2100995	2151565,2138714,2137807,2137091,2132578,2130537,2129457,2129163,2127201,2123879,2123406,2121879,2121311,2121092,2118832,2117367,2116746,2116278,2115613,2115418,2114821,2114302,2113413,2112931,2111828,2111332,2110896,2110224,2109958,2109207,2108766,2102268	Gene ID= ENSG00000065000.15 TPM= 30.48 Transcript Type= NA
chr19	2100988	2151557	2100988	2151557	-	ENST00000345016.9@AP3D1	ENST00000345016.9	protein_coding	2151239,2138619,2137727,2137011,2132471,2130408,2129318,2129090,2127152,2123830,2123358,2121734,2121163,2120862,2118601,2117222,2116605,2116207,2115538,2115219,2114748,2114125,2111679,2111285,2110707,2110136,2109873,2109086,2108687,2100988	2151557,2138714,2137807,2137091,2132578,2130537,2129457,2129163,2127201,2123879,2123406,2121879,2121311,2121092,2118832,2117367,2116746,2116278,2115613,2115418,2114821,2114302,2111828,2111332,2110896,2110224,2109958,2109207,2108766,2102268	Gene ID= ENSG00000065000.15 TPM= 28.89 Transcript Type= protein_coding
chr19	2100994	2151541	2100994	2151541	-	ENST00000355272.10@AP3D1	ENST00000355272.10	protein_coding	2151239,2138619,2137727,2137011,2132471,2130408,2129318,2129090,2127152,2123830,2123358,2121734,2121163,2120862,2118601,2117222,2116605,2116207,2115538,2115219,2114748,2114125,2113336,2112860,2111679,2111285,2110707,2110136,2109873,2109086,2108687,2100994	2151541,2138714,2137807,2137091,2132578,2130537,2129457,2129163,2127201,2123879,2123406,2121879,2121311,2121092,2118832,2117367,2116746,2116278,2115613,2115418,2114821,2114302,2113413,2112967,2111828,2111332,2110896,2110224,2109958,2109207,2108766,2102268	Gene ID= ENSG00000065000.15 TPM= 46.95 Transcript Type= protein_coding
chr19	2222530	2230694	2222530	2230694	+	ENST00000457590.2@DOT1L	ENST00000457590.2	protein_coding	2222530,2223281,2225388,2226183,2227363,2227737,2229785	2222559,2223486,2225452,2227127,2227467,2228382,2230694	Gene ID= ENSG00000104885.17 TPM= 1.06 Transcript Type= protein_coding
chr19	2191435	2192388	2191435	2192388	+	transcript545.chr19.nnic@NA	transcript545.chr19.nnic	NA	2191435	2192388	Gene ID= novel_gene_chr19_546 TPM= 2.12 Transcript Type= NA
chr19	2227973	2230011	2227973	2230011	+	transcript547.chr19.nnic@NA	transcript547.chr19.nnic	NA	2227973	2230011	Gene ID= novel_gene_chr19_548 TPM= 2.12 Transcript Type= NA
chr19	2233153	2236311	2233153	2236311	-	transcript535.chr19.nnic@PLEKHJ1	transcript535.chr19.nnic	protein_coding	2236155,2235923,2235762,2234150,2233998,2233153	2236311,2235933,2235828,2234240,2234061,2233905	Gene ID= ENSG00000104886.11 TPM= 13.99 Transcript Type= NA
chr19	2233153	2237704	2233153	2237704	-	ENST00000589097.5@PLEKHJ1	ENST00000589097.5	protein_coding	2237295,2236155,2235923,2235762,2234150,2233998,2233153	2237704,2236952,2235990,2235828,2234240,2234061,2233905	Gene ID= ENSG00000104886.11 TPM= 117.37 Transcript Type= protein_coding
chr19	2233149	2236326	2233149	2236326	-	ENST00000587962.6@PLEKHJ1	ENST00000587962.6	protein_coding	2236155,2235923,2235762,2234150,2233149	2236326,2235990,2235828,2234240,2234061	Gene ID= ENSG00000104886.11 TPM= 7.08 Transcript Type= protein_coding
chr19	2233156	2236320	2233156	2236320	-	ENST00000326631.6@PLEKHJ1	ENST00000326631.6	protein_coding	2236155,2235923,2235762,2234150,2233998,2233156	2236320,2235990,2235828,2234240,2234061,2233905	Gene ID= ENSG00000104886.11 TPM= 31.51 Transcript Type= protein_coding
chr19	2233153	2236294	2233153	2236294	-	ENST00000591099.6@PLEKHJ1	ENST00000591099.6	protein_coding	2236155,2235923,2235762,2233998,2233153	2236294,2235990,2235828,2234061,2233905	Gene ID= ENSG00000104886.11 TPM= 1.77 Transcript Type= protein_coding
chr19	2236504	2248679	2236504	2248679	+	ENST00000221494.9@SF3A2	ENST00000221494.9	protein_coding	2236504,2243382,2244544,2244733,2245446,2246753,2246882,2247594,2247767	2236901,2243544,2244615,2244779,2245555,2246802,2247022,2247662,2248679	Gene ID= ENSG00000104897.9 TPM= 16.99 Transcript Type= protein_coding
chr19	2236789	2248679	2236789	2248679	+	transcript552.chr19.nic@SF3A2	transcript552.chr19.nic	protein_coding	2236789,2243382,2244544,2244733,2245446,2246882,2247594,2247767	2236901,2243544,2244615,2244779,2246802,2247022,2247662,2248679	Gene ID= ENSG00000104897.9 TPM= 5.31 Transcript Type= NA
chr19	2269520	2273490	2269520	2273490	+	ENST00000602676.6@OAZ1	ENST00000602676.6	protein_coding	2269520,2271385,2271444,2271782,2272735,2272972	2269744,2271442,2271530,2271954,2272820,2273490	Gene ID= ENSG00000104904.12 TPM= 657.3 Transcript Type= protein_coding
chr19	2269509	2273488	2269509	2273488	+	ENST00000590943.6@OAZ1	ENST00000590943.6	protein_coding	2269509,2271782,2272735,2272972	2269744,2271954,2272820,2273488	Gene ID= ENSG00000104904.12 TPM= 19.47 Transcript Type= nonsense_mediated_decay
chr19	2270657	2273488	2270657	2273488	+	ENST00000586054.2@OAZ1	ENST00000586054.2	protein_coding	2270657	2273488	Gene ID= ENSG00000104904.12 TPM= 3.19 Transcript Type= retained_intron
chr19	2269534	2273331	2269534	2273331	+	ENST00000582888.8@OAZ1	ENST00000582888.8	protein_coding	2269534,2271391,2271444,2271782,2272735,2272972	2269744,2271442,2271530,2271954,2272820,2273331	Gene ID= ENSG00000104904.12 TPM= 288.91 Transcript Type= protein_coding
chr19	2321517	2328620	2321517	2328620	-	ENST00000252622.14@LSM7	ENST00000252622.14	protein_coding	2328561,2328387,2324125,2321517	2328620,2328477,2324196,2321822	Gene ID= ENSG00000130332.14 TPM= 33.64 Transcript Type= protein_coding
chr19	2321521	2328611	2321521	2328611	-	ENST00000585409.2@LSM7	ENST00000585409.2	protein_coding	2328561,2328387,2324125,2321521	2328611,2328477,2324192,2321822	Gene ID= ENSG00000130332.14 TPM= 10.27 Transcript Type= protein_coding
chr19	2321520	2328586	2321520	2328586	-	ENST00000587502.2@LSM7	ENST00000587502.2	protein_coding	2328387,2324125,2321520	2328586,2324196,2321822	Gene ID= ENSG00000130332.14 TPM= 6.02 Transcript Type= protein_coding
chr19	2328630	2354806	2328630	2354806	+	ENST00000613503.4@SPPL2B	ENST00000613503.4	protein_coding	2328630,2334602,2337443,2338752,2339069,2339824,2340076,2340898,2343211,2343965,2344362,2344553,2345253,2351434,2352946	2328775,2334721,2337625,2338841,2339208,2339966,2340172,2341014,2343292,2344039,2344424,2344652,2345330,2351594,2354806	Gene ID= ENSG00000005206.16 TPM= 29.21 Transcript Type= protein_coding
chr19	2343517	2353928	2343517	2353928	+	transcript592.chr19.nic@SPPL2B	transcript592.chr19.nic	protein_coding	2343517,2344362,2344553,2345253,2351434,2352946	2344039,2344424,2344652,2345330,2351594,2353928	Gene ID= ENSG00000005206.16 TPM= 7.97 Transcript Type= NA
chr19	2416273	2417481	2416273	2417481	+	transcript593.chr19.nnic@NA	transcript593.chr19.nnic	NA	2416273	2417481	Gene ID= novel_gene_chr19_594 TPM= 3.19 Transcript Type= NA
chr19	2422356	2423075	2422356	2423075	+	transcript595.chr19.nnic@NA	transcript595.chr19.nnic	NA	2422356	2423075	Gene ID= novel_gene_chr19_596 TPM= 3.19 Transcript Type= NA
chr19	2425624	2427894	2425624	2427894	-	ENST00000215570.7@TIMM13	ENST00000215570.7	protein_coding	2427414,2427256,2425624	2427894,2427324,2427046	Gene ID= ENSG00000099800.7 TPM= 7.44 Transcript Type= protein_coding
chr19	2428166	2456996	2428166	2456996	-	ENST00000325327.3@LMNB2	ENST00000325327.3	protein_coding	2456670,2444404,2438375,2438163,2435001,2434788,2434295,2433826,2432416,2431783,2431548,2428166	2456996,2444540,2438531,2438288,2435171,2434913,2434515,2434105,2432523,2431902,2431658,2430952	Gene ID= ENSG00000176619.12 TPM= 18.06 Transcript Type= protein_coding
chr19	2476127	2478259	2476127	2478259	+	ENST00000215631.8@GADD45B	ENST00000215631.8	protein_coding	2476127,2476529,2477029,2477488	2476402,2476630,2477251,2478259	Gene ID= ENSG00000099860.8 TPM= 26.55 Transcript Type= protein_coding
chr19	2514454	2702728	2514454	2702728	-	transcript611.chr19.nic@GNG7	transcript611.chr19.nic	protein_coding	2702646,2646224,2555149,2520608,2516942,2514454	2702728,2646280,2555188,2520725,2517082,2515147	Gene ID= ENSG00000176533.12 TPM= 2.12 Transcript Type= NA
chr19	2514460	2702701	2514460	2702701	-	transcript612.chr19.nnic@GNG7	transcript612.chr19.nnic	protein_coding	2702646,2683480,2646224,2555149,2520608,2514460	2702701,2683733,2646280,2555188,2520725,2515147	Gene ID= ENSG00000176533.12 TPM= 3.19 Transcript Type= NA
chr19	2511219	2702709	2511219	2702709	-	ENST00000382159.7@GNG7	ENST00000382159.7	protein_coding	2702646,2646224,2555149,2520608,2511219	2702709,2646280,2555188,2520725,2515147	Gene ID= ENSG00000176533.12 TPM= 152.95 Transcript Type= protein_coding
chr19	2607333	2608066	2607333	2608066	+	transcript624.chr19.nnic@NA	transcript624.chr19.nnic	NA	2607333	2608066	Gene ID= novel_gene_chr19_625 TPM= 2.12 Transcript Type= NA
chr19	2714567	2721418	2714567	2721418	-	ENST00000323469.4@DIRAS1	ENST00000323469.4	protein_coding	2721304,2714567	2721418,2717875	Gene ID= ENSG00000176490.4 TPM= 134.89 Transcript Type= protein_coding
chr19	2732524	2740152	2732524	2740152	-	ENST00000269740.8@SLC39A3	ENST00000269740.8	protein_coding	2739945,2737048,2732524	2740152,2737379,2733485	Gene ID= ENSG00000141873.10 TPM= 46.74 Transcript Type= protein_coding
chr19	2734524	2740028	2734524	2740028	-	ENST00000455372.2@SLC39A3	ENST00000455372.2	protein_coding	2739945,2734524	2740028,2737379	Gene ID= ENSG00000141873.10 TPM= 4.25 Transcript Type= protein_coding
chr19	2754714	2783371	2754714	2783371	-	ENST00000221566.6@SGTA	ENST00000221566.6	protein_coding	2783233,2768969,2767580,2767136,2765186,2763653,2762506,2761460,2759257,2757693,2757337,2754714	2783371,2769091,2767686,2767220,2765285,2763757,2762644,2761522,2759294,2757782,2757457,2755933	Gene ID= ENSG00000104969.9 TPM= 217.74 Transcript Type= protein_coding
chr19	2773406	2777264	2773406	2777264	+	transcript639.chr19.nnic@NA	transcript639.chr19.nnic	NA	2773406	2777264	Gene ID= novel_gene_chr19_640 TPM= 2.12 Transcript Type= NA
chr19	2781845	2783314	2781845	2783314	-	transcript641.chr19.nnic@NA	transcript641.chr19.nnic	NA	2781845	2783314	Gene ID= novel_gene_chr19_642 TPM= 3.19 Transcript Type= NA
chr19	2785460	2815807	2785460	2815807	+	ENST00000307741.10@THOP1	ENST00000307741.10	protein_coding	2785460,2790421,2794764,2796081,2799689,2805016,2806917,2807442,2808243,2810304,2810640,2811598,2813115	2785678,2790633,2794912,2796188,2799791,2805176,2807052,2807808,2808444,2810490,2810768,2811734,2815807	Gene ID= ENSG00000172009.14 TPM= 81.79 Transcript Type= protein_coding
chr19	2785487	2813599	2785487	2813599	+	transcript647.chr19.nic@THOP1	transcript647.chr19.nic	protein_coding	2785487,2790421,2794764,2796081,2799689,2805016,2806917,2807442,2808243,2810304,2810640,2811634,2813115	2785678,2790633,2794912,2796188,2799791,2805176,2807052,2807808,2808444,2810490,2810768,2811734,2813599	Gene ID= ENSG00000172009.14 TPM= 4.25 Transcript Type= NA
chr19	2819874	2835773	2819874	2835773	+	ENST00000317243.9@ZNF554	ENST00000317243.9	protein_coding	2819874,2823040,2827617,2832303,2833681	2820124,2823112,2827743,2832494,2835773	Gene ID= ENSG00000172006.11 TPM= 11.68 Transcript Type= protein_coding
chr19	2841435	2860484	2841435	2860484	+	ENST00000334241.8@ZNF555	ENST00000334241.8	protein_coding	2841435,2850587,2851468,2852380	2841575,2850713,2851651,2860484	Gene ID= ENSG00000186300.11 TPM= 2.12 Transcript Type= protein_coding
chr19	2900898	2918476	2900898	2918476	+	ENST00000306908.9@ZNF57	ENST00000306908.9	protein_coding	2900898,2915522,2916078,2916924	2901048,2915648,2916249,2918476	Gene ID= ENSG00000171970.12 TPM= 10.62 Transcript Type= protein_coding
chr19	2917646	2920217	2917646	2920217	+	transcript673.chr19.nnic@NA	transcript673.chr19.nnic	NA	2917646	2920217	Gene ID= novel_gene_chr19_674 TPM= 2.12 Transcript Type= NA
chr19	2933218	2944933	2933218	2944933	-	ENST00000314531.4@ZNF77	ENST00000314531.4	protein_coding	2944838,2939281,2936524,2933218	2944933,2939407,2936704,2934815	Gene ID= ENSG00000175691.8 TPM= 2.12 Transcript Type= protein_coding
chr19	2997639	3029292	2997639	3029292	-	transcript686.chr19.nnic@TLE2	transcript686.chr19.nnic	protein_coding	3028881,3028706,3028319,3027829,3025020,3019699,3019283,3017840,3015653,3014570,3013669,3011022,3009578,3008869,3006420,3005721,3005437,3002353,3000647,2997639	3029292,3028803,3028382,3027873,3025082,3019773,3019463,3017859,3015760,3014614,3013818,3011160,3009702,3008945,3006669,3005968,3005584,3002503,3000723,2997955	Gene ID= ENSG00000065717.14 TPM= 22.86 Transcript Type= NA
chr19	2997639	3029491	2997639	3029491	-	transcript690.chr19.nic@TLE2	transcript690.chr19.nic	protein_coding	3028881,3028706,3028319,3027829,3025020,3019283,3017840,3015653,3014570,3013669,3011022,3009542,3008869,3006420,3005721,3005437,3002353,3000647,2997639	3029491,3028803,3028382,3027873,3025082,3019773,3017859,3015760,3014614,3013818,3011160,3009702,3008945,3006669,3005968,3005584,3002503,3000723,2997955	Gene ID= ENSG00000065717.14 TPM= 26.97 Transcript Type= NA
chr19	2997646	3029300	2997646	3029300	-	transcript692.chr19.nic@TLE2	transcript692.chr19.nic	protein_coding	3028881,3028706,3028319,3027829,3025020,3019699,3019283,3017840,3015653,3014570,3013669,3011022,3009542,3008869,3006420,3005721,3005437,3002353,2997646	3029300,3028803,3028382,3027873,3025082,3019773,3019466,3017859,3015760,3014614,3013818,3011160,3009702,3008945,3006669,3005968,3005584,3002503,2997955	Gene ID= ENSG00000065717.14 TPM= 19.94 Transcript Type= NA
chr19	2997638	3029167	2997638	3029167	-	ENST00000262953.10@TLE2	ENST00000262953.10	protein_coding	3028881,3028706,3028319,3027829,3025020,3019699,3019283,3017840,3015653,3014570,3013669,3011022,3009542,3008869,3006420,3005721,3005437,3002353,3000647,2997638	3029167,3028803,3028382,3027873,3025082,3019773,3019463,3017859,3015760,3014614,3013818,3011160,3009702,3008945,3006669,3005968,3005584,3002503,3000723,2997955	Gene ID= ENSG00000065717.14 TPM= 54.85 Transcript Type= protein_coding
chr19	3022616	3024061	3022616	3024061	+	transcript698.chr19.nnic@NA	transcript698.chr19.nnic	NA	3022616	3024061	Gene ID= novel_gene_chr19_699 TPM= 2.12 Transcript Type= NA
chr19	3052910	3063107	3052910	3063107	-	ENST00000221561.12@AES	ENST00000221561.12	protein_coding	3062700,3061160,3057679,3056312,3055664,3054120,3052910	3063107,3061257,3057742,3056356,3055726,3054194,3054040	Gene ID= ENSG00000104964.14 TPM= 173.91 Transcript Type= protein_coding
chr19	3053162	3062557	3053162	3062557	-	ENST00000327141.8@AES	ENST00000327141.8	protein_coding	3062174,3061160,3057679,3056312,3055664,3054120,3053162	3062557,3061257,3057742,3056356,3055726,3054194,3054040	Gene ID= ENSG00000104964.14 TPM= 595.77 Transcript Type= protein_coding
chr19	3094410	3124004	3094410	3124004	+	ENST00000078429.8@GNA11	ENST00000078429.8	protein_coding	3094410,3110149,3113330,3114944,3118924,3119206,3120989	3094787,3110333,3113484,3115072,3119053,3119359,3124004	Gene ID= ENSG00000088256.8 TPM= 155.08 Transcript Type= protein_coding
chr19	3123398	3131490	3123398	3131490	+	transcript744.chr19.nnic@AC005262.1	transcript744.chr19.nnic	processed_pseudogene	3123398,3129828,3131137,3131437	3123998,3129872,3131167,3131490	Gene ID= ENSG00000266944.1 TPM= 2.12 Transcript Type= NA
chr19	3178768	3180332	3178768	3180332	+	ENST00000246115.4@S1PR4	ENST00000246115.4	protein_coding	3178768	3180332	Gene ID= ENSG00000125910.5 TPM= 3.19 Transcript Type= protein_coding
chr19	3185600	3209570	3185600	3209570	+	ENST00000246117.8@NCLN	ENST00000246117.8	protein_coding	3185600,3192470,3193284,3196183,3198817,3201523,3203756,3204005,3204573,3205939,3206152,3206262,3207198,3207391,3207629	3186214,3192660,3193428,3196277,3198897,3201626,3203844,3204144,3204751,3206026,3206190,3206425,3207251,3207469,3209570	Gene ID= ENSG00000125912.10 TPM= 10.62 Transcript Type= protein_coding
chr19	3194745	3209570	3194745	3209570	+	transcript754.chr19.nic@NCLN	transcript754.chr19.nic	protein_coding	3194745,3198817,3201523,3203756,3204005,3204573,3205939,3206152,3206262,3207198,3207391,3207629	3196277,3198897,3201626,3203844,3204144,3204751,3206026,3206190,3206425,3207251,3207469,3209570	Gene ID= ENSG00000125912.10 TPM= 10.62 Transcript Type= NA
chr19	3359207	3462967	3359207	3462967	+	transcript770.chr19.nic@NFIC	transcript770.chr19.nic	protein_coding	3359207,3381712,3425106,3433518,3434277,3435083,3449014,3452482,3462752	3359685,3382243,3425177,3433592,3434400,3435207,3449139,3452666,3462967	Gene ID= ENSG00000141905.18 TPM= 39.83 Transcript Type= NA
chr19	3366549	3462967	3366549	3462967	+	ENST00000341919.7@NFIC	ENST00000341919.7	protein_coding	3366549,3381712,3425106,3433518,3434277,3435083,3449014,3452482,3462752	3366666,3382243,3425177,3433592,3434400,3435207,3449139,3452666,3462967	Gene ID= ENSG00000141905.18 TPM= 16.11 Transcript Type= protein_coding
chr19	3366586	3462907	3366586	3462907	+	ENST00000443272.2@NFIC	ENST00000443272.2	protein_coding	3366586,3381712,3425106,3433518,3434277,3435083,3449014,3452482,3453763,3456550,3462752	3366666,3382243,3425177,3433592,3434400,3435207,3449139,3452666,3453916,3456635,3462907	Gene ID= ENSG00000141905.18 TPM= 20.89 Transcript Type= protein_coding
chr19	3366583	3462900	3366583	3462900	+	ENST00000590282.5@NFIC	ENST00000590282.5	protein_coding	3366583,3381712,3425106,3433518,3434277,3435083,3449014,3452482,3456550,3462752	3366666,3382243,3425177,3433592,3434400,3435207,3449139,3452666,3456635,3462900	Gene ID= ENSG00000141905.18 TPM= 26.2 Transcript Type= protein_coding
chr19	3411330	3414771	3411330	3414771	-	transcript786.chr19.nnic@NA	transcript786.chr19.nnic	NA	3411330	3414771	Gene ID= novel_gene_chr19_787 TPM= 8.5 Transcript Type= NA
chr19	3416888	3417777	3416888	3417777	-	transcript788.chr19.nnic@NA	transcript788.chr19.nnic	NA	3416888	3417777	Gene ID= novel_gene_chr19_789 TPM= 3.19 Transcript Type= NA
chr19	3440433	3442337	3440433	3442337	-	transcript790.chr19.nnic@NA	transcript790.chr19.nnic	NA	3440433	3442337	Gene ID= novel_gene_chr19_791 TPM= 2.12 Transcript Type= NA
chr19	3442381	3445504	3442381	3445504	-	transcript775.chr19.nnic@NA	transcript775.chr19.nnic	NA	3444237,3442381	3445504,3444094	Gene ID= novel_gene_chr19_776 TPM= 2.12 Transcript Type= NA
chr19	3463536	3465372	3463536	3465372	+	transcript778.chr19.nnic@NA	transcript778.chr19.nnic	NA	3463536	3465372	Gene ID= novel_gene_chr19_779 TPM= 33.99 Transcript Type= NA
chr19	3466622	3469106	3466622	3469106	+	transcript784.chr19.nnic@NA	transcript784.chr19.nnic	NA	3466622	3469106	Gene ID= novel_gene_chr19_785 TPM= 88.16 Transcript Type= NA
chr19	3490822	3500940	3490822	3500940	-	ENST00000427575.5@DOHH	ENST00000427575.5	protein_coding	3500561,3496541,3494028,3492262,3490822	3500940,3496886,3494104,3492499,3491811	Gene ID= ENSG00000129932.8 TPM= 107.28 Transcript Type= protein_coding
chr19	3506257	3536194	3506257	3536194	+	transcript798.chr19.nic@FZR1	transcript798.chr19.nic	protein_coding	3506257,3522956,3525868,3526120,3526259,3526980,3527631,3530792,3531714,3531911,3533294,3534421,3534795	3506474,3523058,3525993,3526183,3526386,3527062,3527814,3530857,3531816,3532650,3533398,3534513,3536194	Gene ID= ENSG00000105325.13 TPM= 15.93 Transcript Type= NA
chr19	3506273	3538330	3506273	3538330	+	ENST00000441788.6@FZR1	ENST00000441788.6	protein_coding	3506273,3522956,3525868,3526120,3526259,3526980,3527631,3530792,3531714,3531911,3532417,3533294,3534421,3534795	3506474,3523058,3525993,3526183,3526386,3527062,3527814,3530857,3531816,3532095,3532650,3533398,3534513,3538330	Gene ID= ENSG00000105325.13 TPM= 11.68 Transcript Type= protein_coding
chr19	3538275	3557614	3538275	3557614	-	transcript799.chr19.nic@MFSD12	transcript799.chr19.nic	protein_coding	3557106,3550984,3548123,3547848,3547455,3547272,3546255,3546074,3544809,3542776,3538275	3557614,3551194,3548267,3548030,3547547,3547364,3546425,3546168,3544939,3542977,3538756	Gene ID= ENSG00000161091.12 TPM= 3.54 Transcript Type= NA
chr19	3538261	3557614	3538261	3557614	-	transcript802.chr19.nic@MFSD12	transcript802.chr19.nic	protein_coding	3557106,3550984,3548123,3547848,3547455,3547272,3546255,3546074,3544809,3538261	3557614,3551194,3548267,3548030,3547547,3547364,3546425,3546168,3544939,3538756	Gene ID= ENSG00000161091.12 TPM= 12.03 Transcript Type= NA
chr19	3538261	3557614	3538261	3557614	-	transcript806.chr19.nic@MFSD12	transcript806.chr19.nic	protein_coding	3557106,3550984,3548123,3547848,3547455,3547272,3546074,3544809,3538261	3557614,3551194,3548267,3548030,3547547,3547364,3546168,3544939,3538756	Gene ID= ENSG00000161091.12 TPM= 2.47 Transcript Type= NA
chr19	3544199	3557573	3544199	3557573	-	ENST00000355415.6@MFSD12	ENST00000355415.6	protein_coding	3557106,3550984,3548123,3547848,3547455,3547272,3546255,3546074,3544809,3544199	3557573,3551194,3548267,3548030,3547547,3547364,3546425,3546168,3544939,3544732	Gene ID= ENSG00000161091.12 TPM= 14.87 Transcript Type= protein_coding
chr19	3545272	3545920	3545272	3545920	+	transcript813.chr19.nnic@NA	transcript813.chr19.nnic	NA	3545272	3545920	Gene ID= novel_gene_chr19_814 TPM= 2.12 Transcript Type= NA
chr19	3572912	3579088	3572912	3579088	+	transcript817.chr19.nic@HMG20B	transcript817.chr19.nic	protein_coding	3572912,3573292,3573692,3575540,3576261,3576553,3576892,3577981,3578509	3572994,3573347,3574586,3575660,3576307,3576625,3577107,3578113,3579088	Gene ID= ENSG00000064961.18 TPM= 9.91 Transcript Type= NA
chr19	3572972	3579088	3572972	3579088	+	transcript819.chr19.nic@HMG20B	transcript819.chr19.nic	protein_coding	3572972,3573692,3574383,3575540,3576261,3576553,3576892,3577981,3578509	3573347,3573800,3574586,3575660,3576307,3576625,3577107,3578113,3579088	Gene ID= ENSG00000064961.18 TPM= 9.91 Transcript Type= NA
chr19	3572938	3579088	3572938	3579088	+	ENST00000333651.10@HMG20B	ENST00000333651.10	protein_coding	3572938,3573292,3573692,3574383,3575540,3576261,3576553,3576892,3577981,3578509	3572994,3573347,3573800,3574586,3575660,3576307,3576625,3577107,3578113,3579088	Gene ID= ENSG00000064961.18 TPM= 106.57 Transcript Type= protein_coding
chr19	3594506	3606840	3594506	3606840	-	ENST00000375190.8@TBXA2R	ENST00000375190.8	protein_coding	3606530,3599849,3594506	3606840,3600717,3595933	Gene ID= ENSG00000006638.11 TPM= 2.12 Transcript Type= protein_coding
chr19	3610641	3626815	3610641	3626815	-	ENST00000429344.6@CACTIN	ENST00000429344.6	protein_coding	3626596,3623688,3620707,3620127,3619080,3618875,3614397,3613464,3613058,3610641	3626815,3624162,3620802,3620272,3619242,3618989,3614589,3613586,3613365,3612413	Gene ID= ENSG00000105298.13 TPM= 14.34 Transcript Type= protein_coding
chr19	3610650	3626815	3610650	3626815	-	ENST00000248420.9@CACTIN	ENST00000248420.9	protein_coding	3626596,3623688,3620707,3620127,3619080,3618875,3614397,3613464,3613058,3611904,3610650	3626815,3624162,3620802,3620272,3619242,3618989,3614589,3613586,3613365,3612413,3610971	Gene ID= ENSG00000105298.13 TPM= 7.97 Transcript Type= protein_coding
chr19	3630183	3700479	3630183	3700479	-	ENST00000335312.7@PIP5K1C	ENST00000335312.7	protein_coding	3700297,3667322,3664822,3661871,3660966,3656405,3653290,3651826,3648625,3647338,3645974,3644087,3643243,3642907,3641705,3638884,3633437,3630183	3700479,3667353,3664914,3662001,3661083,3656557,3653589,3652031,3648708,3647386,3646058,3644251,3643381,3642939,3641809,3639016,3633520,3633169	Gene ID= ENSG00000186111.9 TPM= 75.41 Transcript Type= protein_coding
chr19	3636217	3640347	3636217	3640347	+	transcript835.chr19.nnic@NA	transcript835.chr19.nnic	NA	3636217	3640347	Gene ID= novel_gene_chr19_836 TPM= 3.19 Transcript Type= NA
chr19	3657598	3660390	3657598	3660390	+	transcript837.chr19.nnic@NA	transcript837.chr19.nnic	NA	3657598	3660390	Gene ID= novel_gene_chr19_838 TPM= 2.12 Transcript Type= NA
chr19	3750880	3761699	3750880	3761699	-	ENST00000316757.3@APBA3	ENST00000316757.3	protein_coding	3761536,3759689,3759561,3754195,3754019,3753765,3752820,3752508,3751434,3751189,3750880	3761699,3760301,3759600,3754340,3754105,3753926,3752990,3752720,3751553,3751329,3751097	Gene ID= ENSG00000011132.11 TPM= 18.06 Transcript Type= protein_coding
chr19	3762664	3767565	3762664	3767565	+	ENST00000330133.4@MRPL54	ENST00000330133.4	protein_coding	3762664,3765166,3767261	3762818,3765331,3767565	Gene ID= ENSG00000183617.4 TPM= 37.18 Transcript Type= protein_coding
chr19	3777973	3786416	3777973	3786416	-	ENST00000310132.10@MATK	ENST00000310132.10	protein_coding	3786169,3785064,3784825,3784338,3784124,3783814,3783126,3781607,3779698,3779533,3779378,3778992,3778509,3777973	3786416,3785286,3784884,3784451,3784239,3784033,3783219,3781672,3779797,3779617,3779451,3779187,3778595,3778422	Gene ID= ENSG00000007264.14 TPM= 1.06 Transcript Type= protein_coding
chr19	3929576	3930724	3929576	3930724	-	transcript876.chr19.nnic@NA	transcript876.chr19.nnic	NA	3929576	3930724	Gene ID= novel_gene_chr19_877 TPM= 2.12 Transcript Type= NA
chr19	3933330	3942416	3933330	3942416	+	transcript855.chr19.nic@NMRK2	transcript855.chr19.nic	protein_coding	3933330,3936575,3937240,3938603,3939900,3941071,3942083	3933697,3936665,3937288,3938759,3939971,3941177,3942416	Gene ID= ENSG00000077009.13 TPM= 447.35 Transcript Type= NA
chr19	3945720	3947147	3945720	3947147	+	transcript931.chr19.nnic@NA	transcript931.chr19.nnic	NA	3945720	3947147	Gene ID= novel_gene_chr19_932 TPM= 3.19 Transcript Type= NA
chr19	3950856	3951836	3950856	3951836	+	transcript933.chr19.nnic@NA	transcript933.chr19.nnic	NA	3950856	3951836	Gene ID= novel_gene_chr19_934 TPM= 2.12 Transcript Type= NA
chr19	3958454	3971151	3958454	3971151	-	transcript899.chr19.nic@DAPK3	transcript899.chr19.nic	protein_coding	3971022,3969674,3964631,3964244,3963871,3963643,3961009,3960059,3958454	3971151,3969829,3964991,3964373,3963919,3963669,3961161,3960104,3959637	Gene ID= ENSG00000167657.13 TPM= 287.13 Transcript Type= NA
chr19	3958453	3971070	3958453	3971070	-	ENST00000545797.6@DAPK3	ENST00000545797.6	protein_coding	3970921,3969674,3964631,3964244,3963871,3963643,3961009,3960059,3958453	3971070,3969829,3964991,3964373,3963919,3963669,3961161,3960104,3959637	Gene ID= ENSG00000167657.13 TPM= 76.83 Transcript Type= protein_coding
chr19	3958762	3963115	3958762	3963115	+	transcript929.chr19.nnic@NA	transcript929.chr19.nnic	NA	3958762	3963115	Gene ID= novel_gene_chr19_930 TPM= 2.12 Transcript Type= NA
chr19	3961492	3962810	3961492	3962810	+	transcript925.chr19.nnic@NA	transcript925.chr19.nnic	NA	3961492	3962810	Gene ID= novel_gene_chr19_926 TPM= 71.16 Transcript Type= NA
chr19	3965833	3967745	3965833	3967745	-	transcript935.chr19.nnic@NA	transcript935.chr19.nnic	NA	3965833	3967745	Gene ID= novel_gene_chr19_936 TPM= 5.31 Transcript Type= NA
chr19	3976056	3985469	3976056	3985469	-	ENST00000309311.6@EEF2	ENST00000309311.6	protein_coding	3985378,3984136,3983110,3982807,3982246,3981947,3981339,3980841,3980514,3979808,3979329,3977819,3977428,3977215,3976056	3985469,3984350,3983291,3983018,3982424,3982052,3981452,3980979,3980709,3980066,3979436,3978172,3977610,3977347,3976747	Gene ID= ENSG00000167658.15 TPM= 812.23 Transcript Type= protein_coding
chr19	4007646	4039386	4007646	4039386	+	ENST00000262971.2@PIAS4	ENST00000262971.2	protein_coding	4007646,4012923,4024036,4028146,4028510,4028720,4028931,4033100,4033420,4037374,4037616	4007787,4013349,4024120,4028187,4028600,4028848,4029036,4033173,4033580,4037504,4039386	Gene ID= ENSG00000105229.6 TPM= 29.74 Transcript Type= protein_coding
chr19	4043301	4043847	4043301	4043847	-	transcript960.chr19.nnic@NA	transcript960.chr19.nnic	NA	4043301	4043847	Gene ID= novel_gene_chr19_961 TPM= 5.31 Transcript Type= NA
chr19	4047661	4057053	4047661	4057053	-	transcript951.chr19.nic@ZBTB7A	transcript951.chr19.nic	protein_coding	4053971,4047661	4057053,4048244	Gene ID= ENSG00000178951.8 TPM= 12.75 Transcript Type= NA
chr19	4044364	4066945	4044364	4066945	-	ENST00000322357.8@ZBTB7A	ENST00000322357.8	protein_coding	4066682,4053971,4044364	4066945,4055247,4048244	Gene ID= ENSG00000178951.8 TPM= 22.31 Transcript Type= protein_coding
chr19	4047742	4065732	4047742	4065732	-	ENST00000601588.1@ZBTB7A	ENST00000601588.1	protein_coding	4065430,4053971,4047742	4065732,4055247,4048244	Gene ID= ENSG00000178951.8 TPM= 16.99 Transcript Type= protein_coding
chr19	4090321	4100455	4090321	4100455	-	transcript976.chr19.nic@MAP2K2	transcript976.chr19.nic	protein_coding	4099201,4097279,4095388,4094453,4090321	4100455,4097343,4095449,4094498,4090708	Gene ID= ENSG00000126934.13 TPM= 39.75 Transcript Type= NA
chr19	4090321	4100455	4090321	4100455	-	transcript977.chr19.nic@MAP2K2	transcript977.chr19.nic	protein_coding	4097279,4095388,4094453,4090321	4100455,4095449,4094498,4090708	Gene ID= ENSG00000126934.13 TPM= 13.81 Transcript Type= NA
chr19	4090321	4124129	4090321	4124129	-	ENST00000262948.9@MAP2K2	ENST00000262948.9	protein_coding	4123784,4117419,4110509,4102376,4101229,4101019,4099201,4097279,4095388,4094453,4090321	4124129,4117629,4110655,4102453,4101280,4101143,4099414,4097343,4095449,4094498,4090708	Gene ID= ENSG00000126934.13 TPM= 279.79 Transcript Type= protein_coding
chr19	4247079	4269090	4247079	4269090	+	ENST00000262962.11@CCDC94	ENST00000262962.11	protein_coding	4247079,4249228,4251027,4254355,4258242,4261994,4267624,4268584	4247170,4249328,4251171,4254489,4258423,4262114,4267774,4269090	Gene ID= ENSG00000105248.15 TPM= 11.68 Transcript Type= protein_coding
chr19	4324043	4338877	4324043	4338877	-	ENST00000594605.5@STAP2	ENST00000594605.5	protein_coding	4338652,4333973,4333694,4332022,4329961,4328675,4327316,4327124,4326942,4325396,4325216,4324455,4324043	4338877,4334044,4333816,4332078,4330061,4328809,4327385,4327226,4327007,4325545,4325308,4324529,4324197	Gene ID= ENSG00000178078.11 TPM= 2.12 Transcript Type= protein_coding
chr19	4324043	4338821	4324043	4338821	-	ENST00000600324.5@STAP2	ENST00000600324.5	protein_coding	4338652,4333973,4333694,4332022,4329961,4328675,4327316,4327124,4326942,4325396,4325216,4324455,4324043	4338821,4334044,4333816,4332078,4330061,4328809,4327385,4327226,4327007,4325545,4325308,4324667,4324197	Gene ID= ENSG00000178078.11 TPM= 1.06 Transcript Type= protein_coding
chr19	4343559	4360072	4343559	4360072	+	ENST00000599840.5@MPND	ENST00000599840.5	protein_coding	4343559,4343708,4345745,4352897,4354045,4354324,4354949,4355097,4357253,4357515,4358083,4359163,4359916	4343600,4343994,4345981,4353029,4354129,4354420,4355021,4355173,4357421,4357585,4358172,4359255,4360072	Gene ID= ENSG00000008382.15 TPM= 21.24 Transcript Type= protein_coding
chr19	4360370	4400547	4360370	4400547	-	ENST00000269886.7@SH3GL1	ENST00000269886.7	protein_coding	4400324,4366926,4366501,4365482,4364088,4363720,4363370,4362612,4362329,4360370	4400547,4366994,4366573,4365625,4364221,4363878,4363473,4362736,4362385,4361796	Gene ID= ENSG00000141985.9 TPM= 77.54 Transcript Type= protein_coding
chr19	4402662	4443392	4402662	4443392	+	ENST00000301280.9@CHAF1A	ENST00000301280.9	protein_coding	4402662,4405912,4408903,4418020,4422566,4423335,4423806,4428664,4429438,4429708,4430549,4431952,4433070,4442245,4442925	4402814,4405962,4409759,4418076,4422795,4423395,4423874,4428890,4429606,4429788,4430641,4432207,4433539,4442341,4443392	Gene ID= ENSG00000167670.15 TPM= 2.12 Transcript Type= protein_coding
chr19	4445006	4457822	4445006	4457822	-	ENST00000301281.10@UBXN6	ENST00000301281.10	protein_coding	4457615,4453930,4453458,4452364,4448318,4447550,4446836,4446500,4446283,4446049,4445006	4457822,4454093,4453522,4452492,4448415,4447625,4446920,4446719,4446413,4446197,4445623	Gene ID= ENSG00000167671.11 TPM= 63.91 Transcript Type= protein_coding
chr19	4445006	4457823	4445006	4457823	-	transcript1011.chr19.nic@UBXN6	transcript1011.chr19.nic	protein_coding	4457615,4453930,4453458,4452364,4448318,4447550,4446836,4446500,4446049,4445006	4457823,4454093,4453522,4452492,4448415,4447625,4446920,4446719,4446413,4445623	Gene ID= ENSG00000167671.11 TPM= 23.55 Transcript Type= NA
chr19	4445010	4455298	4445010	4455298	-	ENST00000394765.7@UBXN6	ENST00000394765.7	protein_coding	4455221,4453930,4453458,4452364,4448318,4447550,4446836,4446500,4446283,4446049,4445010	4455298,4454093,4453522,4452492,4448415,4447625,4446920,4446719,4446413,4446197,4445623	Gene ID= ENSG00000167671.11 TPM= 19.83 Transcript Type= protein_coding
chr19	4449423	4450784	4449423	4450784	+	transcript1013.chr19.nnic@NA	transcript1013.chr19.nnic	NA	4449423	4450784	Gene ID= novel_gene_chr19_1014 TPM= 6.37 Transcript Type= NA
chr19	4472255	4502208	4472255	4502208	+	transcript1017.chr19.nic@HDGFL2	transcript1017.chr19.nic	protein_coding	4472255,4475275,4475445,4488676,4491566,4491764,4493703,4493982,4494166,4496302,4497958,4498306,4498814,4499491,4501191	4472422,4475351,4475583,4488876,4491682,4491835,4493862,4494057,4494475,4496405,4498031,4498376,4498915,4499704,4502208	Gene ID= ENSG00000167674.14 TPM= 48.86 Transcript Type= NA
chr19	4502192	4513368	4502192	4513368	-	transcript1019.chr19.nnic@PLIN4	transcript1019.chr19.nnic	protein_coding	4513293,4512334,4512160,4511955,4510446,4508768,4504861,4502192	4513368,4512395,4512233,4512066,4511755,4508955,4504947,4504785	Gene ID= ENSG00000167676.4 TPM= 97.16 Transcript Type= NA
chr19	4502192	4518566	4502192	4518566	-	transcript1021.chr19.nnic@PLIN4	transcript1021.chr19.nnic	protein_coding	4518438,4518222,4517554,4516617,4510446,4508768,4504861,4502192	4518566,4518289,4517698,4516678,4513704,4508955,4504947,4504785	Gene ID= ENSG00000167676.4 TPM= 19.62 Transcript Type= NA
chr19	4502192	4513330	4502192	4513330	-	transcript1024.chr19.nnic@PLIN4	transcript1024.chr19.nnic	protein_coding	4513238,4511683,4510446,4508768,4504861,4502192	4513330,4511953,4511286,4508955,4504947,4504785	Gene ID= ENSG00000167676.4 TPM= 95.38 Transcript Type= NA
chr19	4502192	4518465	4502192	4518465	-	ENST00000633942.1@PLIN4	ENST00000633942.1	protein_coding	4518385,4518222,4517554,4516617,4510446,4508768,4504861,4502192	4518465,4518289,4517698,4516678,4513704,4508955,4504947,4504785	Gene ID= ENSG00000167676.4 TPM= 61.04 Transcript Type= protein_coding
chr19	4503296	4508324	4503296	4508324	+	transcript1036.chr19.nnic@NA	transcript1036.chr19.nnic	NA	4503296	4508324	Gene ID= novel_gene_chr19_1037 TPM= 3.19 Transcript Type= NA
chr19	4523079	4535273	4523079	4535273	-	transcript1047.chr19.nnic@PLIN5	transcript1047.chr19.nnic	protein_coding	4535165,4534015,4531627,4529784,4529073,4525633,4524963,4523079	4535273,4534095,4531751,4529866,4529253,4525832,4525076,4524085	Gene ID= ENSG00000214456.8 TPM= 2.12 Transcript Type= NA
chr19	4523079	4535273	4523079	4535273	-	transcript1048.chr19.nnic@PLIN5	transcript1048.chr19.nnic	protein_coding	4535165,4533979,4531627,4529784,4529073,4525633,4524963,4523079	4535273,4534095,4531822,4529866,4529253,4525832,4525076,4524085	Gene ID= ENSG00000214456.8 TPM= 3.19 Transcript Type= NA
chr19	4523079	4535273	4523079	4535273	-	transcript1051.chr19.nnic@PLIN5	transcript1051.chr19.nnic	protein_coding	4535165,4534015,4529784,4529073,4525633,4524963,4523079	4535273,4534095,4529866,4529253,4525832,4525076,4524085	Gene ID= ENSG00000214456.8 TPM= 4.25 Transcript Type= NA
chr19	4522531	4535224	4522531	4535224	-	ENST00000381848.7@PLIN5	ENST00000381848.7	protein_coding	4535165,4534015,4531627,4529784,4529073,4525633,4524963,4522531	4535224,4534095,4531822,4529866,4529253,4525832,4525076,4524085	Gene ID= ENSG00000214456.8 TPM= 38.24 Transcript Type= protein_coding
chr19	4639506	4655526	4639506	4655526	+	transcript1059.chr19.nnic@TNFAIP8L1	transcript1059.chr19.nnic	protein_coding	4639506,4651867,4654473	4639629,4653159,4655526	Gene ID= ENSG00000185361.8 TPM= 4.25 Transcript Type= NA
chr19	4657545	4670370	4657545	4670370	-	ENST00000262947.7@MYDGF	ENST00000262947.7	protein_coding	4670161,4668595,4664876,4660669,4659931,4657545	4670370,4668645,4664937,4660750,4660003,4658084	Gene ID= ENSG00000074842.7 TPM= 217.74 Transcript Type= protein_coding
chr19	4675226	4723863	4675226	4723863	-	ENST00000262960.13@DPP9	ENST00000262960.13	protein_coding	4723674,4722499,4719851,4714081,4705858,4704131,4703886,4702603,4702027,4700216,4697551,4695378,4694661,4690878,4689570,4688757,4685626,4684663,4683477,4682696,4679835,4675226	4723863,4722551,4719941,4714337,4705970,4704304,4704054,4702716,4702155,4700277,4697651,4695555,4694823,4690957,4689722,4688892,4685771,4684809,4683629,4682838,4679946,4676656	Gene ID= ENSG00000142002.16 TPM= 56.29 Transcript Type= protein_coding
chr19	4791716	4795552	4791716	4795552	+	transcript1079.chr19.nnic@NA	transcript1079.chr19.nnic	NA	4791716	4795552	Gene ID= novel_gene_chr19_1080 TPM= 245.36 Transcript Type= NA
chr19	4838341	4867768	4838341	4867768	-	ENST00000221957.8@PLIN3	ENST00000221957.8	protein_coding	4867609,4861329,4859826,4859590,4852016,4847691,4844668,4838341	4867768,4861411,4860024,4859672,4852301,4847890,4844793,4839536	Gene ID= ENSG00000105355.8 TPM= 57.36 Transcript Type= protein_coding
chr19	4969112	5079164	4969112	5079164	+	transcript1097.chr19.nic@KDM4B	transcript1097.chr19.nic	protein_coding	4969112,5016257,5032866,5039836,5041137,5047476,5071010,5077367	4969230,5016339,5033031,5040011,5041251,5047669,5071059,5079164	Gene ID= ENSG00000127663.14 TPM= 3.19 Transcript Type= NA
chr19	4969121	5153595	4969121	5153595	+	ENST00000159111.8@KDM4B	ENST00000159111.8	protein_coding	4969121,5016257,5032866,5039836,5041137,5047476,5071010,5077367,5082367,5110622,5119653,5131076,5131887,5133883,5135339,5137262,5137621,5137962,5143967,5144248,5144783,5150358,5151335	4969230,5016339,5033031,5040011,5041251,5047669,5071059,5077470,5082504,5110818,5119852,5131545,5132007,5134061,5135561,5137338,5137676,5138070,5144152,5144412,5144902,5150450,5153595	Gene ID= ENSG00000127663.14 TPM= 24.43 Transcript Type= protein_coding
chr19	4969114	4969638	4969114	4969638	+	transcript1102.chr19.nnic@NA	transcript1102.chr19.nnic	NA	4969114	4969638	Gene ID= novel_gene_chr19_1103 TPM= 3.19 Transcript Type= NA
chr19	5104484	5109194	5104484	5109194	-	transcript1104.chr19.nnic@NA	transcript1104.chr19.nnic	NA	5104484	5109194	Gene ID= novel_gene_chr19_1105 TPM= 3.19 Transcript Type= NA
chr19	5216679	5218212	5216679	5218212	+	transcript1108.chr19.nnic@NA	transcript1108.chr19.nnic	NA	5216679	5218212	Gene ID= novel_gene_chr19_1109 TPM= 2.12 Transcript Type= NA
chr19	5586999	5622980	5586999	5622980	-	ENST00000252542.8@SAFB2	ENST00000252542.8	protein_coding	5622530,5621309,5616422,5616132,5613465,5612540,5611120,5610639,5609995,5604787,5604583,5600130,5598793,5595361,5593891,5592747,5591748,5590278,5587868,5587701,5586999	5622980,5621396,5616486,5616335,5613527,5612567,5611630,5610688,5610095,5604936,5604695,5600260,5598884,5595497,5594178,5592887,5591793,5590408,5587980,5587767,5587399	Gene ID= ENSG00000130254.11 TPM= 20.18 Transcript Type= protein_coding
chr19	5623094	5668471	5623094	5668471	+	transcript1131.chr19.nic@SAFB	transcript1131.chr19.nic	protein_coding	5623094,5626405,5641594,5641740,5645337,5648016,5649926,5650978,5653115,5653338,5654061,5654368,5657241,5661518,5664022,5664397,5667046,5667347,5667820,5668162	5623394,5626489,5641658,5641946,5645399,5648043,5649975,5651072,5653264,5653420,5654200,5654456,5657347,5661808,5664159,5664439,5667164,5667450,5667886,5668471	Gene ID= ENSG00000160633.12 TPM= 10.09 Transcript Type= NA
chr19	5623118	5668466	5623118	5668466	+	ENST00000592224.5@SAFB	ENST00000592224.5	protein_coding	5623118,5626405,5641594,5641740,5645337,5648016,5648989,5649926,5650978,5653115,5653338,5654061,5654368,5657241,5661521,5664022,5664397,5667046,5667347,5667820,5668162	5623394,5626489,5641658,5641946,5645399,5648043,5649499,5649975,5651072,5653264,5653420,5654200,5654456,5657347,5661808,5664159,5664439,5667164,5667450,5667886,5668466	Gene ID= ENSG00000160633.12 TPM= 70.63 Transcript Type= protein_coding
chr19	5678422	5680896	5678422	5680896	-	ENST00000309324.8@C19orf70	ENST00000309324.8	protein_coding	5680458,5679586,5679345,5678422	5680896,5679763,5679396,5678648	Gene ID= ENSG00000174917.8 TPM= 217.74 Transcript Type= protein_coding
chr19	5678422	5680252	5678422	5680252	-	ENST00000587950.5@C19orf70	ENST00000587950.5	protein_coding	5680055,5679586,5679345,5678422	5680252,5679763,5679396,5678648	Gene ID= ENSG00000174917.8 TPM= 24.43 Transcript Type= protein_coding
chr19	5678915	5680488	5678915	5680488	-	ENST00000587589.1@C19orf70	ENST00000587589.1	protein_coding	5680458,5679586,5679345,5678915	5680488,5679763,5679396,5679230	Gene ID= ENSG00000174917.8 TPM= 1.06 Transcript Type= protein_coding
chr19	5690196	5691876	5690196	5691876	+	ENST00000347512.7@RPL36	ENST00000347512.7	protein_coding	5690196,5690506,5691319,5691532	5690327,5690600,5691453,5691876	Gene ID= ENSG00000130255.12 TPM= 197.56 Transcript Type= protein_coding
chr19	5690316	5691667	5690316	5691667	+	ENST00000394580.2@RPL36	ENST00000394580.2	protein_coding	5690316,5691319,5691532	5690600,5691453,5691667	Gene ID= ENSG00000130255.12 TPM= 21.77 Transcript Type= protein_coding
chr19	5681009	5688522	5681009	5688522	+	ENST00000581893.5@HSD11B1L	ENST00000581893.5	protein_coding	5681009,5684965,5686900,5687282,5687503,5687753	5681271,5685119,5686991,5687375,5687668,5688522	Gene ID= ENSG00000167733.13 TPM= 3.19 Transcript Type= protein_coding
chr19	5681041	5688522	5681041	5688522	+	ENST00000342970.6@HSD11B1L	ENST00000342970.6	protein_coding	5681041,5684965,5686416,5686900,5687282,5687503,5687753	5681271,5685119,5686527,5686991,5687375,5687668,5688522	Gene ID= ENSG00000167733.13 TPM= 2.12 Transcript Type= protein_coding
chr19	5681048	5685589	5681048	5685589	+	ENST00000422535.6@HSD11B1L	ENST00000422535.6	protein_coding	5681048,5684819,5684989,5685302	5681271,5684905,5685119,5685589	Gene ID= ENSG00000167733.13 TPM= 3.19 Transcript Type= protein_coding
chr19	5691834	5720290	5691834	5720290	-	ENST00000360614.7@LONP1	ENST00000360614.7	protein_coding	5719704,5714183,5713134,5711771,5708342,5707697,5707060,5705772,5700789,5699027,5696670,5696249,5696054,5694761,5694387,5693552,5693298,5691834	5720290,5714271,5713253,5712002,5708403,5707826,5707143,5705992,5700927,5699205,5696757,5696371,5696170,5694901,5694552,5693769,5693462,5692208	Gene ID= ENSG00000196365.11 TPM= 246.16 Transcript Type= protein_coding
chr19	5703431	5705173	5703431	5705173	+	transcript1172.chr19.nnic@NA	transcript1172.chr19.nnic	NA	5703431	5705173	Gene ID= novel_gene_chr19_1173 TPM= 3.19 Transcript Type= NA
chr19	5785140	5791238	5785140	5791238	-	ENST00000309061.11@DUS3L	ENST00000309061.11	protein_coding	5791044,5790047,5789207,5788357,5788024,5787589,5787296,5787061,5786749,5786467,5785603,5785383,5785140	5791238,5790335,5789719,5788398,5788176,5787705,5787361,5787171,5786845,5786542,5785791,5785511,5785275	Gene ID= ENSG00000141994.15 TPM= 22.31 Transcript Type= protein_coding
chr19	5793387	5828324	5793387	5828324	+	transcript1179.chr19.nnic@NRTN	transcript1179.chr19.nnic	protein_coding	5793387,5805155,5823768,5827749	5793394,5805451,5824334,5828324	Gene ID= ENSG00000171119.2 TPM= 9.03 Transcript Type= NA
chr19	5805012	5828324	5805012	5828324	+	transcript1189.chr19.nnic@NRTN	transcript1189.chr19.nnic	protein_coding	5805012,5823768,5827749	5805451,5824334,5828324	Gene ID= ENSG00000171119.2 TPM= 97.19 Transcript Type= NA
chr19	5805064	5828324	5805064	5828324	+	transcript1190.chr19.nnic@NRTN	transcript1190.chr19.nnic	protein_coding	5805064,5824159,5827749	5805451,5824334,5828324	Gene ID= ENSG00000171119.2 TPM= 3.19 Transcript Type= NA
chr19	5823802	5828324	5823802	5828324	+	ENST00000303212.2@NRTN	ENST00000303212.2	protein_coding	5823802,5827749	5824334,5828324	Gene ID= ENSG00000171119.2 TPM= 39.3 Transcript Type= protein_coding
chr19	5894677	5903756	5894677	5903756	-	ENST00000308961.4@NDUFA11	ENST00000308961.4	protein_coding	5903612,5896905,5896453,5894677	5903756,5896997,5896575,5894854	Gene ID= ENSG00000174886.12 TPM= 433.36 Transcript Type= protein_coding
chr19	5894675	5903771	5894675	5903771	-	ENST00000592634.5@NDUFA11	ENST00000592634.5	protein_coding	5903612,5896905,5894675	5903771,5896997,5896575	Gene ID= ENSG00000174886.12 TPM= 21.24 Transcript Type= protein_coding
chr19	5894677	5903754	5894677	5903754	-	ENST00000593233.1@NDUFA11	ENST00000593233.1	protein_coding	5903612,5901335,5896905,5896453,5894677	5903754,5901454,5896997,5896575,5894854	Gene ID= ENSG00000174886.12 TPM= 53.11 Transcript Type= nonsense_mediated_decay
chr19	5917352	5978086	5917352	5978086	-	ENST00000034275.12@RANBP3	ENST00000034275.12	protein_coding	5978061,5957918,5941799,5941621,5933414,5932452,5931404,5927968,5925634,5924827,5923812,5923194,5921201,5918496,5917794,5917352	5978086,5957973,5941835,5941707,5933479,5932544,5931531,5928087,5925737,5924905,5923914,5923303,5921321,5918638,5917980,5917653	Gene ID= ENSG00000031823.14 TPM= 5.31 Transcript Type= protein_coding
chr19	5916139	5978140	5916139	5978140	-	ENST00000340578.10@RANBP3	ENST00000340578.10	protein_coding	5978061,5957918,5951393,5941799,5941621,5933414,5932452,5931404,5927968,5925634,5924827,5923812,5923194,5921201,5918496,5917794,5916139	5978140,5957973,5951596,5941835,5941707,5933479,5932544,5931531,5928087,5925737,5924905,5923914,5923303,5921321,5918638,5917980,5917653	Gene ID= ENSG00000031823.14 TPM= 11.68 Transcript Type= protein_coding
chr19	5917323	5978093	5917323	5978093	-	ENST00000591092.5@RANBP3	ENST00000591092.5	protein_coding	5978061,5957918,5941799,5941621,5933414,5932452,5931419,5927968,5925634,5924827,5923812,5923194,5921201,5918496,5917794,5917323	5978093,5957973,5941835,5941707,5933479,5932544,5931531,5928087,5925737,5924905,5923914,5923303,5921321,5918638,5917980,5917653	Gene ID= ENSG00000031823.14 TPM= 8.5 Transcript Type= protein_coding
chr19	5993164	6110534	5993164	6110534	-	ENST00000303657.9@RFX2	ENST00000303657.9	protein_coding	6110393,6047407,6044193,6042044,6039980,6026163,6016090,6012986,6010136,6008106,6007690,6007012,6004201,6002721,6001815,5997060,5995601,5993164	6110534,6047504,6044282,6042123,6040241,6026237,6016271,6013105,6010251,6008224,6007802,6007166,6004298,6002870,6002023,5997213,5995643,5994950	Gene ID= ENSG00000087903.12 TPM= 2.12 Transcript Type= protein_coding
chr19	6006760	6008430	6006760	6008430	-	transcript1217.chr19.nnic@NA	transcript1217.chr19.nnic	NA	6006760	6008430	Gene ID= novel_gene_chr19_1218 TPM= 2.12 Transcript Type= NA
chr19	6210379	6279988	6210379	6279988	-	transcript1220.chr19.nnic@MLLT1	transcript1220.chr19.nnic	protein_coding	6279773,6270579,6262228,6230570,6222121,6217954,6216405,6213939,6213726,6213337,6210379	6279988,6270759,6262310,6230713,6222684,6218041,6216513,6214038,6213797,6213408,6213170	Gene ID= ENSG00000130382.8 TPM= 3.19 Transcript Type= NA
chr19	6210379	6218120	6210379	6218120	-	transcript1221.chr19.nic@MLLT1	transcript1221.chr19.nic	protein_coding	6217954,6216405,6213939,6213726,6213337,6210379	6218120,6216513,6214038,6213797,6213408,6213170	Gene ID= ENSG00000130382.8 TPM= 2.12 Transcript Type= NA
chr19	6210379	6279948	6210379	6279948	-	ENST00000252674.8@MLLT1	ENST00000252674.8	protein_coding	6279773,6270579,6262228,6230570,6226977,6222121,6217954,6216405,6213939,6213726,6213337,6210379	6279948,6270759,6262310,6230713,6227102,6222684,6218041,6216513,6214038,6213797,6213408,6213170	Gene ID= ENSG00000130382.8 TPM= 79.66 Transcript Type= protein_coding
chr19	6361452	6368908	6361452	6368908	+	ENST00000245816.8@CLPP	ENST00000245816.8	protein_coding	6361452,6361869,6362446,6364452,6366258,6368538	6361772,6361940,6362542,6364639,6366363,6368908	Gene ID= ENSG00000125656.8 TPM= 72.23 Transcript Type= protein_coding
chr19	6361737	6368902	6361737	6368902	+	transcript1230.chr19.nnic@CLPP	transcript1230.chr19.nnic	protein_coding	6361737,6361869,6362446,6364452,6368538	6361772,6361940,6362542,6364639,6368902	Gene ID= ENSG00000125656.8 TPM= 4.25 Transcript Type= NA
chr19	6372433	6375251	6372433	6375251	+	ENST00000245812.7@ALKBH7	ENST00000245812.7	protein_coding	6372433,6374203,6374465,6374811	6373024,6374376,6374589,6375251	Gene ID= ENSG00000125652.7 TPM= 115.24 Transcript Type= protein_coding
chr19	6375148	6379058	6375148	6379058	-	ENST00000597721.1@PSPN	ENST00000597721.1	protein_coding	6375148	6379058	Gene ID= ENSG00000125650.4 TPM= 4.25 Transcript Type= protein_coding
chr19	6379569	6393460	6379569	6393460	-	ENST00000394456.9@GTF2F1	ENST00000394456.9	protein_coding	6392984,6392857,6391902,6389444,6387389,6383311,6381697,6381554,6381359,6381122,6380904,6380573,6379569	6393460,6392903,6391974,6389637,6387559,6383495,6381850,6381615,6381478,6381195,6381042,6380690,6380485	Gene ID= ENSG00000125651.13 TPM= 39.3 Transcript Type= protein_coding
chr19	6436081	6459837	6436081	6459837	-	transcript1250.chr19.nnic@SLC25A23	transcript1250.chr19.nnic	protein_coding	6459473,6458198,6457503,6456420,6454559,6454323,6453981,6452312,6444151,6441979,6438724,6438447,6436081	6459837,6458324,6457590,6456531,6454717,6454475,6454088,6452479,6444301,6442159,6438821,6438534,6436464	Gene ID= ENSG00000125648.14 TPM= 9.93 Transcript Type= NA
chr19	6436081	6459837	6436081	6459837	-	transcript1258.chr19.nic@SLC25A23	transcript1258.chr19.nic	protein_coding	6459473,6458198,6457503,6456420,6454559,6454323,6453981,6452312,6444151,6438724,6438447,6436081	6459837,6458324,6457590,6456531,6454717,6454475,6454088,6452479,6444301,6438821,6438534,6436464	Gene ID= ENSG00000125648.14 TPM= 5.68 Transcript Type= NA
chr19	6436081	6459837	6436081	6459837	-	transcript1264.chr19.nic@SLC25A23	transcript1264.chr19.nic	protein_coding	6459473,6458198,6457503,6456420,6454559,6454323,6453981,6452312,6444151,6438447,6436081	6459837,6458324,6457590,6456531,6454717,6454475,6454088,6452479,6444301,6438534,6436464	Gene ID= ENSG00000125648.14 TPM= 34.36 Transcript Type= NA
chr19	6440065	6459837	6440065	6459837	-	transcript1268.chr19.nnic@SLC25A23	transcript1268.chr19.nnic	protein_coding	6459473,6458198,6457503,6456420,6454559,6454323,6453981,6452312,6444151,6441979,6440065	6459837,6458324,6457590,6456531,6454717,6454475,6454088,6452479,6444301,6442159,6440322	Gene ID= ENSG00000125648.14 TPM= 12.76 Transcript Type= NA
chr19	6440066	6459837	6440066	6459837	-	transcript1272.chr19.nic@SLC25A23	transcript1272.chr19.nic	protein_coding	6459473,6458198,6457503,6456420,6454559,6454323,6453981,6452312,6444151,6441979,6440066	6459837,6458324,6457590,6456531,6454717,6454475,6454088,6452479,6444301,6442159,6441484	Gene ID= ENSG00000125648.14 TPM= 8.55 Transcript Type= NA
chr19	6436079	6459837	6436079	6459837	-	transcript1279.chr19.nic@SLC25A23	transcript1279.chr19.nic	protein_coding	6459473,6458198,6457503,6456420,6454559,6454323,6453981,6452312,6444151,6436079	6459837,6458324,6457590,6456531,6454717,6454475,6454088,6452479,6444301,6436464	Gene ID= ENSG00000125648.14 TPM= 11.38 Transcript Type= NA
chr19	6436081	6459837	6436081	6459837	-	transcript1280.chr19.nnic@SLC25A23	transcript1280.chr19.nnic	protein_coding	6459473,6458198,6457503,6456420,6454559,6454323,6452312,6444151,6438447,6436081	6459837,6458324,6457590,6456531,6454717,6454475,6452479,6444301,6438534,6436464	Gene ID= ENSG00000125648.14 TPM= 7.58 Transcript Type= NA
chr19	6436079	6459837	6436079	6459837	-	transcript1304.chr19.nic@SLC25A23	transcript1304.chr19.nic	protein_coding	6459473,6458198,6457503,6456420,6454559,6454323,6444151,6436079	6459837,6458324,6457590,6456531,6454717,6454475,6444301,6436464	Gene ID= ENSG00000125648.14 TPM= 5.31 Transcript Type= NA
chr19	6440064	6459735	6440064	6459735	-	ENST00000301454.8@SLC25A23	ENST00000301454.8	protein_coding	6459473,6458198,6457503,6456420,6454559,6454323,6453981,6452312,6444151,6440064	6459735,6458324,6457590,6456531,6454717,6454475,6454088,6452479,6444301,6442159	Gene ID= ENSG00000125648.14 TPM= 55.29 Transcript Type= protein_coding
chr19	6443562	6459735	6443562	6459735	-	ENST00000334510.9@SLC25A23	ENST00000334510.9	protein_coding	6459473,6458198,6457503,6456420,6454559,6454323,6453981,6452312,6444151,6443562	6459735,6458324,6457590,6456531,6454717,6454475,6454088,6452479,6444301,6443656	Gene ID= ENSG00000125648.14 TPM= 3.24 Transcript Type= protein_coding
chr19	6677704	6720682	6677704	6720682	-	ENST00000245907.10@C3	ENST00000245907.10	protein_coding	6720516,6719211,6718247,6718094,6714352,6714166,6713992,6713407,6713189,6712508,6712257,6710987,6710639,6709684,6707800,6707466,6707076,6702471,6702127,6697652,6697344,6696593,6696379,6694431,6693412,6692924,6690629,6686746,6686124,6684988,6684775,6684560,6684388,6682142,6681941,6680158,6679407,6679125,6678372,6678152,6677704	6720682,6719403,6718412,6718164,6714446,6714248,6714082,6713509,6713315,6712623,6712406,6711196,6710845,6709842,6707929,6707537,6707273,6702579,6702212,6697794,6697556,6696659,6696465,6694634,6693487,6693083,6690727,6686902,6686287,6685146,6684834,6684650,6684439,6682229,6682030,6680263,6679496,6679208,6678455,6678287,6678023	Gene ID= ENSG00000125730.16 TPM= 1.06 Transcript Type= protein_coding
chr19	6730055	6737302	6730055	6737302	-	transcript1315.chr19.nic@GPR108	transcript1315.chr19.nic	protein_coding	6736990,6736592,6735908,6735622,6734183,6734005,6733845,6733570,6733168,6732476,6732263,6732025,6731891,6731473,6731199,6730987,6730055	6737302,6736711,6735958,6735704,6734307,6734054,6733913,6733674,6733301,6732549,6732380,6732155,6731934,6731522,6731282,6731111,6730384	Gene ID= ENSG00000125734.15 TPM= 5.31 Transcript Type= NA
chr19	6730098	6737560	6730098	6737560	-	ENST00000597706.5@GPR108	ENST00000597706.5	protein_coding	6737457,6736592,6735908,6735622,6734183,6734005,6733845,6733570,6733168,6732987,6732472,6732263,6732025,6731891,6731473,6731199,6730987,6730098	6737560,6736711,6735958,6735704,6734307,6734054,6733913,6733674,6733301,6733062,6732549,6732380,6732155,6731934,6731522,6731282,6731111,6730384	Gene ID= ENSG00000125734.15 TPM= 18.06 Transcript Type= nonsense_mediated_decay
chr19	6730086	6737260	6730086	6737260	-	ENST00000430424.8@GPR108	ENST00000430424.8	protein_coding	6736990,6736592,6735908,6735622,6734183,6734005,6733845,6733570,6733168,6732987,6732476,6732263,6732025,6731891,6731473,6731199,6730987,6730086	6737260,6736711,6735958,6735704,6734307,6734054,6733913,6733674,6733301,6733062,6732549,6732380,6732155,6731934,6731522,6731282,6731111,6730384	Gene ID= ENSG00000125734.15 TPM= 13.81 Transcript Type= protein_coding
chr19	6739655	6751500	6739655	6751500	+	transcript1319.chr19.nnic@TRIP10	transcript1319.chr19.nnic	protein_coding	6739655,6741010,6741225,6742967,6743194,6743494,6743708,6744554,6744800,6745635,6746452,6749934,6750292,6750512,6751063	6739785,6741125,6741281,6743114,6743256,6743598,6743836,6744700,6744994,6746196,6746561,6750066,6750431,6750633,6751500	Gene ID= ENSG00000125733.17 TPM= 10.9 Transcript Type= NA
chr19	6739655	6751500	6739655	6751500	+	transcript1324.chr19.nic@TRIP10	transcript1324.chr19.nic	protein_coding	6739655,6741010,6741225,6742967,6743194,6743494,6743708,6744554,6744800,6746178,6746452,6749934,6750292,6750512,6751063	6739785,6741125,6741281,6743114,6743256,6743598,6743836,6744700,6744994,6746196,6746561,6750066,6750431,6750633,6751500	Gene ID= ENSG00000125733.17 TPM= 11.96 Transcript Type= NA
chr19	6739727	6751523	6739727	6751523	+	ENST00000313244.13@TRIP10	ENST00000313244.13	protein_coding	6739727,6741010,6741225,6742967,6743194,6743494,6743708,6744554,6744800,6746029,6746452,6749934,6750292,6750512,6751063	6739785,6741125,6741281,6743114,6743256,6743598,6743836,6744700,6744994,6746196,6746561,6750066,6750431,6750633,6751523	Gene ID= ENSG00000125733.17 TPM= 94.33 Transcript Type= protein_coding
chr19	6739680	6751526	6739680	6751526	+	ENST00000313285.12@TRIP10	ENST00000313285.12	protein_coding	6739680,6741010,6741225,6742967,6743194,6743494,6743708,6744554,6744800,6746452,6749934,6750292,6750512,6751063	6739785,6741125,6741281,6743114,6743256,6743598,6743836,6744700,6744994,6746561,6750066,6750431,6750633,6751526	Gene ID= ENSG00000125733.17 TPM= 41.87 Transcript Type= protein_coding
chr19	6739714	6751509	6739714	6751509	+	ENST00000600677.5@TRIP10	ENST00000600677.5	protein_coding	6739714,6741010,6741225,6742967,6743194,6743494,6743708,6744554,6744800,6746178,6746433,6749934,6750292,6750512,6751063	6739785,6741125,6741281,6743114,6743256,6743598,6743836,6744700,6744994,6746196,6746561,6750066,6750431,6750633,6751509	Gene ID= ENSG00000125733.17 TPM= 17.24 Transcript Type= nonsense_mediated_decay
chr19	6739762	6751464	6739762	6751464	+	ENST00000596758.5@TRIP10	ENST00000596758.5	protein_coding	6739762,6741010,6741225,6742967,6743194,6743494,6743708,6744554,6744800,6746452,6749934,6750292,6750512,6751034	6739785,6741125,6741281,6743114,6743256,6743598,6743836,6744700,6744994,6746561,6750066,6750431,6750633,6751464	Gene ID= ENSG00000125733.17 TPM= 1.19 Transcript Type= protein_coding
chr19	7069444	7084218	7069444	7084218	+	ENST00000252840.10@ZNF557	ENST00000252840.10	protein_coding	7069444,7070562,7074996,7075655,7076381,7081360,7081970,7082878	7069773,7070653,7075105,7075743,7076507,7081455,7082052,7084218	Gene ID= ENSG00000130544.11 TPM= 2.12 Transcript Type= protein_coding
chr19	7159423	7294433	7159423	7294433	-	transcript1353.chr19.nic@INSR	transcript1353.chr19.nic	protein_coding	7293792,7267345,7184316,7174583,7172290,7170537,7167968,7166154,7163032,7159423	7294433,7267896,7184637,7174731,7172434,7170751,7168094,7166404,7163199,7159645	Gene ID= ENSG00000171105.13 TPM= 15.4 Transcript Type= NA
chr19	7266809	7294433	7266809	7294433	-	transcript1357.chr19.nic@INSR	transcript1357.chr19.nic	protein_coding	7293792,7266809	7294433,7267896	Gene ID= ENSG00000171105.13 TPM= 4.25 Transcript Type= NA
chr19	7151971	7293866	7151971	7293866	-	ENST00000598216.1@INSR	ENST00000598216.1	protein_coding	7293792,7267345,7184316,7174583,7172290,7170537,7167968,7166154,7163032,7151971	7293866,7267896,7184637,7174731,7172434,7170751,7168094,7166404,7163199,7152927	Gene ID= ENSG00000171105.13 TPM= 2.66 Transcript Type= retained_intron
chr19	7114690	7115911	7114690	7115911	-	transcript1359.chr19.nnic@NA	transcript1359.chr19.nnic	NA	7114690	7115911	Gene ID= novel_gene_chr19_1360 TPM= 2.12 Transcript Type= NA
chr19	7144706	7146481	7144706	7146481	-	transcript1361.chr19.nnic@NA	transcript1361.chr19.nnic	NA	7144706	7146481	Gene ID= novel_gene_chr19_1362 TPM= 2.12 Transcript Type= NA
chr19	7476875	7489019	7476875	7489019	-	ENST00000221480.5@PEX11G	ENST00000221480.5	protein_coding	7488951,7485838,7482033,7478314,7476875	7489019,7486026,7482211,7478376,7477436	Gene ID= ENSG00000104883.7 TPM= 4.25 Transcript Type= protein_coding
chr19	7516118	7521026	7516118	7521026	+	ENST00000597229.1@ZNF358	ENST00000597229.1	protein_coding	7516118,7519205	7516249,7521026	Gene ID= ENSG00000198816.6 TPM= 199.69 Transcript Type= protein_coding
chr19	7522626	7534009	7522626	7534009	+	ENST00000264079.10@MCOLN1	ENST00000264079.10	protein_coding	7522626,7524961,7526439,7526761,7527520,7527864,7528158,7528597,7528821,7529101,7529590,7530286,7533523,7533759	7522781,7525166,7526606,7526926,7527628,7527960,7528257,7528703,7528970,7529202,7529712,7530501,7533653,7534009	Gene ID= ENSG00000090674.15 TPM= 23.37 Transcript Type= protein_coding
chr19	7619525	7629565	7619525	7629565	-	ENST00000358368.4@XAB2	ENST00000358368.4	protein_coding	7629477,7628150,7627728,7627243,7626136,7625880,7624301,7623731,7623170,7622762,7622530,7622331,7621135,7620846,7620547,7620275,7619946,7619747,7619525	7629565,7628298,7627851,7627440,7626270,7626044,7624445,7623882,7623289,7622893,7622661,7622444,7621297,7621036,7620669,7620446,7620075,7619856,7619647	Gene ID= ENSG00000076924.11 TPM= 24.43 Transcript Type= protein_coding
chr19	7629737	7631956	7629737	7631956	+	ENST00000594797.5@PET100	ENST00000594797.5	protein_coding	7629737,7630573,7630823,7631473	7629860,7630659,7630846,7631956	Gene ID= ENSG00000229833.9 TPM= 81.79 Transcript Type= protein_coding
chr19	7629809	7631623	7629809	7631623	+	ENST00000623154.1@PET100	ENST00000623154.1	protein_coding	7629809	7631623	Gene ID= ENSG00000229833.9 TPM= 1.06 Transcript Type= TEC
chr19	7637127	7647873	7637127	7647873	+	ENST00000414284.6@STXBP2	ENST00000414284.6	protein_coding	7637127,7638726,7639019,7639731,7640740,7640900,7641705,7642034,7642203,7642429,7642766,7642983,7643165,7644614,7645197,7646249,7647162,7647354,7647725	7637186,7638775,7639100,7639807,7640809,7641003,7641853,7642118,7642333,7642536,7642823,7643048,7643245,7644752,7645306,7646344,7647247,7647511,7647873	Gene ID= ENSG00000076944.15 TPM= 1.06 Transcript Type= protein_coding
chr19	7676628	7679826	7676628	7679826	+	ENST00000333598.7@MCEMP1	ENST00000333598.7	protein_coding	7676628,7677637,7678104,7678350,7678491,7678924,7679098	7677175,7677726,7678241,7678400,7678604,7678983,7679826	Gene ID= ENSG00000183019.7 TPM= 3.19 Transcript Type= protein_coding
chr19	7680879	7682858	7680879	7682858	+	ENST00000426877.2@TRAPPC5	ENST00000426877.2	protein_coding	7680879,7682242	7681026,7682858	Gene ID= ENSG00000181029.8 TPM= 14.34 Transcript Type= protein_coding
chr19	7680875	7682856	7680875	7682856	+	ENST00000317378.5@TRAPPC5	ENST00000317378.5	protein_coding	7680875,7682242	7681049,7682856	Gene ID= ENSG00000181029.8 TPM= 13.28 Transcript Type= protein_coding
chr19	7830204	7864976	7830204	7864976	+	transcript1394.chr19.nic@EVI5L	transcript1394.chr19.nic	protein_coding	7830204,7846496,7847732,7848921,7849256,7849997,7851434,7851681,7853086,7853273,7856015,7857092,7858191,7860561,7861878,7862122,7862388,7862972,7863185,7863424	7830381,7846679,7847921,7849145,7849330,7850122,7851577,7851770,7853183,7853333,7856068,7857124,7858331,7860689,7862018,7862277,7862534,7863067,7863280,7864976	Gene ID= ENSG00000142459.8 TPM= 43.02 Transcript Type= NA
chr19	7830204	7864975	7830204	7864975	+	transcript1397.chr19.nic@EVI5L	transcript1397.chr19.nic	protein_coding	7830204,7846496,7847732,7848921,7849256,7849997,7851434,7851681,7853086,7853273,7856015,7857092,7858191,7860561,7861878,7862122,7862388,7862972,7863185	7830381,7846679,7847921,7849145,7849330,7850122,7851577,7851770,7853183,7853333,7856068,7857124,7858331,7860689,7862018,7862277,7862534,7863067,7864975	Gene ID= ENSG00000142459.8 TPM= 9.03 Transcript Type= NA
chr19	7830204	7848610	7830204	7848610	+	transcript1403.chr19.nic@EVI5L	transcript1403.chr19.nic	protein_coding	7830204,7846496,7847732	7830381,7846679,7848610	Gene ID= ENSG00000142459.8 TPM= 2.12 Transcript Type= NA
chr19	7830233	7864976	7830233	7864976	+	ENST00000270530.8@EVI5L	ENST00000270530.8	protein_coding	7830233,7846496,7847732,7848921,7849256,7849997,7851434,7851681,7853086,7853273,7856015,7858191,7860561,7861878,7862122,7862388,7862972,7863185,7863424	7830381,7846679,7847921,7849145,7849330,7850122,7851577,7851770,7853183,7853333,7856068,7858331,7860689,7862018,7862277,7862534,7863067,7863280,7864976	Gene ID= ENSG00000142459.8 TPM= 8.5 Transcript Type= protein_coding
chr19	7888505	7902016	7888505	7902016	+	ENST00000306708.10@LRRC8E	ENST00000306708.10	protein_coding	7888505,7895599,7898661	7888600,7895741,7902016	Gene ID= ENSG00000171017.10 TPM= 2.12 Transcript Type= protein_coding
chr19	7903908	7907036	7903908	7907036	+	transcript1406.chr19.nic@MAP2K7	transcript1406.chr19.nic	protein_coding	7903908,7905808	7904068,7907036	Gene ID= ENSG00000076984.17 TPM= 2.12 Transcript Type= NA
chr19	7916575	7919097	7916575	7919097	+	transcript1408.chr19.nic@TGFBR3L	transcript1408.chr19.nic	protein_coding	7916575,7917473,7917701,7918057,7918917	7916942,7917599,7917859,7918129,7919097	Gene ID= ENSG00000260001.6 TPM= 3.72 Transcript Type= NA
chr19	7917478	7919097	7917478	7919097	+	transcript1410.chr19.nic@TGFBR3L	transcript1410.chr19.nic	protein_coding	7917478,7918917	7918129,7919097	Gene ID= ENSG00000260001.6 TPM= 2.66 Transcript Type= NA
chr19	7920316	7923250	7920316	7923250	+	ENST00000221573.10@SNAPC2	ENST00000221573.10	protein_coding	7920316,7921423,7921705,7922035,7922445	7920549,7921542,7921773,7922347,7923250	Gene ID= ENSG00000104976.11 TPM= 40.36 Transcript Type= protein_coding
chr19	7926740	7943920	7926740	7943920	-	ENST00000270538.7@TIMM44	ENST00000270538.7	protein_coding	7943607,7941102,7938027,7935065,7934089,7933864,7933485,7932840,7932627,7931138,7928077,7927657,7926740	7943920,7941197,7938197,7935145,7934238,7934003,7933570,7932932,7932751,7931188,7928166,7927767,7927306	Gene ID= ENSG00000104980.7 TPM= 7.97 Transcript Type= protein_coding
chr19	7926721	7928948	7926721	7928948	-	transcript1422.chr19.nic@TIMM44	transcript1422.chr19.nic	protein_coding	7927657,7926721	7928948,7927306	Gene ID= ENSG00000104980.7 TPM= 19.65 Transcript Type= NA
chr19	7926718	7928944	7926718	7928944	-	ENST00000599939.1@TIMM44	ENST00000599939.1	protein_coding	7926718	7928944	Gene ID= ENSG00000104980.7 TPM= 14.87 Transcript Type= retained_intron
chr19	8209319	8262421	8209319	8262421	+	transcript1442.chr19.nnic@CERS4	transcript1442.chr19.nnic	protein_coding	8209319,8210706,8241341,8251076,8254499,8255607,8255822,8256236,8256618,8256949,8257879,8261688,8261930	8209494,8210862,8241457,8251249,8254616,8255725,8255879,8256286,8256710,8257077,8257985,8261844,8262421	Gene ID= ENSG00000090661.11 TPM= 6.9 Transcript Type= NA
chr19	8209319	8262421	8209319	8262421	+	transcript1443.chr19.nnic@CERS4	transcript1443.chr19.nnic	protein_coding	8209319,8210706,8250773,8251076,8254499,8255607,8255822,8256236,8256618,8256949,8257879,8261688,8261930	8209494,8210862,8250920,8251249,8254616,8255725,8255879,8256286,8256710,8257077,8257985,8261844,8262421	Gene ID= ENSG00000090661.11 TPM= 2.66 Transcript Type= NA
chr19	8209319	8262421	8209319	8262421	+	transcript1445.chr19.nic@CERS4	transcript1445.chr19.nic	protein_coding	8209319,8210706,8251044,8254499,8255607,8255822,8256236,8256618,8256949,8257879,8261688,8261930	8209494,8210862,8251249,8254616,8255725,8255879,8256286,8256710,8257077,8257985,8261844,8262421	Gene ID= ENSG00000090661.11 TPM= 4.78 Transcript Type= NA
chr19	8209371	8262421	8209371	8262421	+	transcript1447.chr19.nic@CERS4	transcript1447.chr19.nic	protein_coding	8209371,8210706,8254499,8255607,8255822,8256236,8256618,8256949,8257879,8261688,8261930	8209494,8210862,8254616,8255725,8255879,8256286,8256710,8257077,8257985,8261844,8262421	Gene ID= ENSG00000090661.11 TPM= 2.66 Transcript Type= NA
chr19	8209356	8262421	8209356	8262421	+	ENST00000559450.5@CERS4	ENST00000559450.5	protein_coding	8209356,8251076,8254499,8255607,8255822,8256236,8256618,8256949,8257879,8261688,8261930	8209494,8251249,8254616,8255725,8255879,8256286,8256710,8257077,8257985,8261844,8262421	Gene ID= ENSG00000090661.11 TPM= 2.66 Transcript Type= protein_coding
chr19	8209353	8262421	8209353	8262421	+	ENST00000251363.9@CERS4	ENST00000251363.9	protein_coding	8209353,8210706,8251076,8254499,8255607,8255822,8256236,8256618,8256949,8257879,8261688,8261930	8209494,8210862,8251249,8254616,8255725,8255879,8256286,8256710,8257077,8257985,8261844,8262421	Gene ID= ENSG00000090661.11 TPM= 12.21 Transcript Type= protein_coding
chr19	8302127	8308350	8302127	8308350	-	ENST00000537716.6@CD320	ENST00000537716.6	protein_coding	8308149,8303855,8302777,8302127	8308350,8304088,8302980,8302605	Gene ID= ENSG00000167775.10 TPM= 1.94 Transcript Type= protein_coding
chr19	8302127	8308371	8302127	8308371	-	transcript1483.chr19.nnic@CD320	transcript1483.chr19.nnic	protein_coding	8308149,8302777,8302127	8308371,8302980,8302605	Gene ID= ENSG00000167775.10 TPM= 2.47 Transcript Type= NA
chr19	8302127	8308355	8302127	8308355	-	ENST00000301458.9@CD320	ENST00000301458.9	protein_coding	8308149,8305031,8303855,8302777,8302127	8308355,8305156,8304088,8302980,8302605	Gene ID= ENSG00000167775.10 TPM= 69.92 Transcript Type= protein_coding
chr19	8311284	8321396	8311284	8321396	-	ENST00000301457.2@NDUFA7	ENST00000301457.2	protein_coding	8321308,8320857,8316496,8311284	8321396,8320906,8316645,8311595	Gene ID= ENSG00000267855.5 TPM= 1.06 Transcript Type= protein_coding
chr19	8308768	8321375	8308768	8321375	-	ENST00000593729.5@NDUFA7	ENST00000593729.5	protein_coding	8321308,8320857,8316496,8311412,8308768	8321375,8320906,8316645,8311595,8308884	Gene ID= ENSG00000267855.5 TPM= 2.12 Transcript Type= nonsense_mediated_decay
chr19	8321500	8323340	8321500	8323340	+	ENST00000600659.2@RPS28	ENST00000600659.2	protein_coding	8321500,8321656,8321953,8322272	8321569,8321703,8322091,8323340	Gene ID= ENSG00000233927.4 TPM= 383.44 Transcript Type= protein_coding
chr19	8321158	8322946	8321158	8322946	+	ENST00000449223.3@RPS28	ENST00000449223.3	protein_coding	8321158,8321656,8322272	8321569,8322091,8322946	Gene ID= ENSG00000233927.4 TPM= 10.62 Transcript Type= retained_intron
chr19	8323302	8343277	8323302	8343277	-	transcript1461.chr19.nnic@KANK3	transcript1461.chr19.nnic	protein_coding	8343225,8337795,8334500,8334320,8333910,8333724,8333014,8324951,8324630,8324449,8323302	8343277,8337856,8335792,8334419,8334116,8333808,8333230,8325096,8324830,8324547,8323563	Gene ID= ENSG00000186994.11 TPM= 4.25 Transcript Type= NA
chr19	8322584	8343262	8322584	8343262	-	transcript1464.chr19.nnic@KANK3	transcript1464.chr19.nnic	protein_coding	8343225,8334500,8334320,8333910,8333724,8333014,8324951,8324630,8324449,8322584	8343262,8335792,8334419,8334116,8333808,8333230,8325096,8324830,8324547,8322922	Gene ID= ENSG00000186994.11 TPM= 3.19 Transcript Type= NA
chr19	8322584	8343277	8322584	8343277	-	transcript1465.chr19.nic@KANK3	transcript1465.chr19.nic	protein_coding	8343225,8337795,8334500,8333910,8333724,8333014,8324951,8324630,8324449,8322584	8343277,8337856,8335792,8334419,8333808,8333230,8325096,8324830,8324547,8322922	Gene ID= ENSG00000186994.11 TPM= 10.62 Transcript Type= NA
chr19	8322584	8343262	8322584	8343262	-	ENST00000330915.7@KANK3	ENST00000330915.7	protein_coding	8343225,8337795,8334500,8334320,8333910,8333724,8333014,8324951,8324630,8324449,8322584	8343262,8337856,8335792,8334419,8334116,8333808,8333230,8325096,8324830,8324547,8322922	Gene ID= ENSG00000186994.11 TPM= 84.97 Transcript Type= protein_coding
chr19	8323315	8343262	8323315	8343262	-	ENST00000593649.5@KANK3	ENST00000593649.5	protein_coding	8343225,8337795,8334500,8334320,8333910,8333724,8333014,8324951,8324630,8324449,8323315	8343262,8337856,8335792,8334419,8334116,8333808,8333230,8325096,8324830,8324547,8323538	Gene ID= ENSG00000186994.11 TPM= 7.44 Transcript Type= protein_coding
chr19	8364151	8374373	8364151	8374373	+	ENST00000301455.6@ANGPTL4	ENST00000301455.6	protein_coding	8364151,8365954,8366202,8369219,8371056,8371241,8373705	8364639,8366064,8366319,8369332,8371151,8371522,8374373	Gene ID= ENSG00000167772.11 TPM= 14.34 Transcript Type= protein_coding
chr19	8364169	8374331	8364169	8374331	+	ENST00000393962.6@ANGPTL4	ENST00000393962.6	protein_coding	8364169,8365954,8366202,8371056,8371241,8373705	8364639,8366064,8366319,8371151,8371522,8374331	Gene ID= ENSG00000167772.11 TPM= 1.59 Transcript Type= protein_coding
chr19	8374379	8390685	8374379	8390685	-	ENST00000593581.5@RAB11B-AS1	ENST00000593581.5	antisense_RNA	8390009,8376962,8374379	8390685,8377067,8374608	Gene ID= ENSG00000269386.5 TPM= 9.56 Transcript Type= antisense_RNA
chr19	8390199	8404434	8390199	8404434	+	ENST00000328024.10@RAB11B	ENST00000328024.10	protein_coding	8390199,8399863,8402086,8402485,8403413	8390456,8400058,8402279,8402565,8404434	Gene ID= ENSG00000185236.11 TPM= 254.39 Transcript Type= protein_coding
chr19	8402659	8404014	8402659	8404014	-	transcript1523.chr19.nnic@NA	transcript1523.chr19.nnic	NA	8402659	8404014	Gene ID= novel_gene_chr19_1524 TPM= 4.78 Transcript Type= NA
chr19	8413271	8439017	8413271	8439017	+	transcript1497.chr19.nic@MARCH2	transcript1497.chr19.nic	protein_coding	8413271,8418742,8421789,8426609,8430658,8438388	8413420,8418807,8422016,8426804,8430867,8439017	Gene ID= ENSG00000099785.10 TPM= 14.45 Transcript Type= NA
chr19	8413292	8439017	8413292	8439017	+	transcript1499.chr19.nic@MARCH2	transcript1499.chr19.nic	protein_coding	8413292,8418537,8421789,8426609,8430658,8438388	8413420,8418807,8422016,8426804,8430867,8439017	Gene ID= ENSG00000099785.10 TPM= 45.25 Transcript Type= NA
chr19	8413298	8439017	8413298	8439017	+	transcript1500.chr19.nic@MARCH2	transcript1500.chr19.nic	protein_coding	8413298,8418537,8421789,8426609,8430658,8438388	8413794,8418807,8422016,8426804,8430867,8439017	Gene ID= ENSG00000099785.10 TPM= 6.16 Transcript Type= NA
chr19	8413270	8439004	8413270	8439004	+	ENST00000381035.8@MARCH2	ENST00000381035.8	protein_coding	8413270,8421789,8426609,8438388	8413420,8422016,8426804,8439004	Gene ID= ENSG00000099785.10 TPM= 2.97 Transcript Type= protein_coding
chr19	8413303	8439011	8413303	8439011	+	ENST00000215555.6@MARCH2	ENST00000215555.6	protein_coding	8413303,8421789,8426609,8430658,8438388	8413420,8422016,8426804,8430867,8439011	Gene ID= ENSG00000099785.10 TPM= 81.36 Transcript Type= protein_coding
chr19	8418405	8439017	8418405	8439017	+	ENST00000602117.1@MARCH2	ENST00000602117.1	protein_coding	8418405,8421789,8426609,8430658,8438388	8418807,8422016,8426804,8430867,8439017	Gene ID= ENSG00000099785.10 TPM= 7.01 Transcript Type= protein_coding
chr19	8417750	8418245	8417750	8418245	-	transcript1525.chr19.nnic@NA	transcript1525.chr19.nnic	NA	8417750	8418245	Gene ID= novel_gene_chr19_1526 TPM= 4.25 Transcript Type= NA
chr19	8435875	8439015	8435875	8439015	+	transcript1521.chr19.nnic@NA	transcript1521.chr19.nnic	NA	8435875	8439015	Gene ID= novel_gene_chr19_1522 TPM= 7.44 Transcript Type= NA
chr19	8444767	8489114	8444767	8489114	+	ENST00000348943.7@HNRNPM	ENST00000348943.7	protein_coding	8444767,8455405,8462529,8463497,8463593,8465324,8465480,8466235,8467535,8468774,8471326,8473664,8474167,8483158,8485603,8487024,8488691	8445111,8455574,8462581,8463504,8463686,8465362,8465515,8466388,8467584,8468834,8471427,8473708,8474244,8483211,8486405,8487075,8489114	Gene ID= ENSG00000099783.11 TPM= 32.27 Transcript Type= protein_coding
chr19	8444974	8489114	8444974	8489114	+	transcript1529.chr19.nic@HNRNPM	transcript1529.chr19.nic	protein_coding	8444974,8455405,8462529,8463497,8463593,8465324,8465480,8466235,8467535,8468774,8471326,8473664,8474167,8485603,8487024,8488691	8445111,8455574,8462581,8463504,8463686,8465362,8465515,8466388,8467584,8468834,8471427,8473708,8474244,8486405,8487075,8489114	Gene ID= ENSG00000099783.11 TPM= 6.78 Transcript Type= NA
chr19	8444856	8489114	8444856	8489114	+	transcript1530.chr19.nic@HNRNPM	transcript1530.chr19.nic	protein_coding	8444856,8455405,8462529,8463497,8463593,8465324,8465480,8466235,8467535,8468774,8471326,8474167,8483158,8485603,8487024,8488691	8445111,8455574,8462581,8463504,8463686,8465362,8465515,8466388,8467584,8468834,8471427,8474244,8483211,8486405,8487075,8489114	Gene ID= ENSG00000099783.11 TPM= 8.37 Transcript Type= NA
chr19	8444974	8489114	8444974	8489114	+	transcript1532.chr19.nic@HNRNPM	transcript1532.chr19.nic	protein_coding	8444974,8455405,8463497,8463593,8465324,8465480,8466235,8467535,8468774,8471326,8473664,8474167,8483158,8485603,8487024,8488691	8445111,8455574,8463504,8463686,8465362,8465515,8466388,8467584,8468834,8471427,8473708,8474244,8483211,8486405,8487075,8489114	Gene ID= ENSG00000099783.11 TPM= 7.84 Transcript Type= NA
chr19	8444974	8489114	8444974	8489114	+	transcript1537.chr19.nnic@HNRNPM	transcript1537.chr19.nnic	protein_coding	8444974,8455405,8462529,8463593,8465324,8466235,8467535,8468774,8471326,8474167,8483158,8485603,8487024,8488691	8445111,8455574,8462581,8463686,8465515,8466388,8467584,8468834,8471427,8474244,8483211,8486405,8487075,8489114	Gene ID= ENSG00000099783.11 TPM= 21.12 Transcript Type= NA
chr19	8444958	8489114	8444958	8489114	+	ENST00000325495.8@HNRNPM	ENST00000325495.8	protein_coding	8444958,8455405,8462529,8463497,8463593,8465324,8466235,8467535,8468774,8471326,8473664,8474167,8483158,8485603,8487024,8488691	8445111,8455574,8462581,8463504,8463686,8465515,8466388,8467584,8468834,8471427,8473708,8474244,8483211,8486405,8487075,8489114	Gene ID= ENSG00000099783.11 TPM= 45 Transcript Type= protein_coding
chr19	8455946	8459564	8455946	8459564	-	transcript1547.chr19.nnic@NA	transcript1547.chr19.nnic	NA	8455946	8459564	Gene ID= novel_gene_chr19_1548 TPM= 24.43 Transcript Type= NA
chr19	8511335	8514148	8511335	8514148	-	ENST00000255616.8@ZNF414	ENST00000255616.8	protein_coding	8514044,8513029,8512604,8512387,8511617,8511335	8514148,8513341,8512711,8512492,8511960,8511536	Gene ID= ENSG00000133250.13 TPM= 2.12 Transcript Type= protein_coding
chr19	8806170	8832328	8806170	8832328	-	ENST00000601372.5@ZNF558	ENST00000601372.5	protein_coding	8832209,8831318,8825002,8824082,8822629,8822003,8821180,8813127,8812561,8806170	8832328,8831401,8825108,8824417,8822724,8822091,8821306,8813222,8812643,8812063	Gene ID= ENSG00000167785.8 TPM= 1.06 Transcript Type= protein_coding
chr19	9140380	9163413	9140380	9163413	+	ENST00000247956.10@ZNF317	ENST00000247956.10	protein_coding	9140380,9155925,9156612,9157268,9157980,9158826,9160114	9140592,9156041,9156748,9157394,9158075,9158908,9163413	Gene ID= ENSG00000130803.14 TPM= 11.15 Transcript Type= protein_coding
chr19	9140415	9163415	9140415	9163415	+	ENST00000591278.5@ZNF317	ENST00000591278.5	protein_coding	9140415,9155925,9156612,9157268,9157834,9158826,9160114	9140592,9156041,9156748,9157394,9158075,9158908,9163415	Gene ID= ENSG00000130803.14 TPM= 4.78 Transcript Type= nonsense_mediated_decay
chr19	9324226	9343843	9324226	9343843	+	transcript1579.chr19.nic@ZNF559	transcript1579.chr19.nic	protein_coding	9324226,9324695,9337796,9338494,9339193,9341102,9341617	9324404,9324780,9337858,9338582,9339319,9341184,9343843	Gene ID= ENSG00000188321.13 TPM= 2.12 Transcript Type= NA
chr19	9323772	9343843	9323772	9343843	+	ENST00000587557.5@ZNF559	ENST00000587557.5	protein_coding	9323772,9324695,9338494,9339193,9341102,9341695	9324228,9324780,9338582,9339319,9341184,9343843	Gene ID= ENSG00000188321.13 TPM= 1.06 Transcript Type= protein_coding
chr19	9324179	9343843	9324179	9343843	+	ENST00000317221.11@ZNF559	ENST00000317221.11	protein_coding	9324179,9324695,9337796,9338494,9339193,9341102,9341617	9324228,9324780,9337865,9338582,9339319,9341184,9343843	Gene ID= ENSG00000188321.13 TPM= 1.06 Transcript Type= protein_coding
chr19	9412598	9435590	9412598	9435590	-	transcript1589.chr19.nnic@ZNF266	transcript1589.chr19.nnic	protein_coding	9435284,9435108,9434798,9434075,9433668,9420065,9419217,9418505,9417828,9415654,9412598	9435590,9435193,9434859,9434235,9433786,9420218,9419299,9418631,9417908,9415742,9414720	Gene ID= ENSG00000174652.17 TPM= 5.31 Transcript Type= NA
chr19	9412598	9435590	9412598	9435590	-	transcript1590.chr19.nnic@ZNF266	transcript1590.chr19.nnic	protein_coding	9435284,9435108,9434798,9420065,9419217,9418505,9417828,9415654,9412598	9435590,9435193,9434859,9420218,9419299,9418631,9417908,9415742,9414720	Gene ID= ENSG00000174652.17 TPM= 3.19 Transcript Type= NA
chr19	9528007	9538621	9528007	9538621	-	transcript1599.chr19.nnic@ZNF426	transcript1599.chr19.nnic	protein_coding	9538259,9536208,9535188,9533840,9532845,9530985,9528007	9538621,9536356,9535279,9533924,9532925,9531067,9529636	Gene ID= ENSG00000130818.11 TPM= 2.12 Transcript Type= NA
chr19	9528007	9538621	9528007	9538621	-	transcript1600.chr19.nic@ZNF426	transcript1600.chr19.nic	protein_coding	9538259,9536208,9535188,9533840,9532845,9530985,9528007	9538621,9536356,9535279,9533966,9532925,9531067,9529636	Gene ID= ENSG00000130818.11 TPM= 13.81 Transcript Type= NA
chr19	9528007	9538590	9528007	9538590	-	ENST00000593003.5@ZNF426	ENST00000593003.5	protein_coding	9538259,9536208,9533840,9532845,9530985,9528007	9538590,9536356,9533966,9532925,9531067,9529636	Gene ID= ENSG00000130818.11 TPM= 2.12 Transcript Type= protein_coding
chr19	9538739	9539734	9538739	9539734	+	ENST00000619671.1@AC008567.3	ENST00000619671.1	lincRNA	9538739,9539136	9538998,9539734	Gene ID= ENSG00000278611.1 TPM= 3.19 Transcript Type= lincRNA
chr19	9560332	9584534	9560332	9584534	-	transcript1607.chr19.nnic@ZNF121	transcript1607.chr19.nnic	protein_coding	9584461,9569002,9568095,9565540,9560332	9584534,9569082,9568175,9567109,9562354	Gene ID= ENSG00000197961.11 TPM= 6.37 Transcript Type= NA
chr19	9581428	9583067	9581428	9583067	+	transcript1611.chr19.nnic@NA	transcript1611.chr19.nnic	NA	9581428	9583067	Gene ID= novel_gene_chr19_1612 TPM= 4.25 Transcript Type= NA
chr19	9607332	9621399	9607332	9621399	-	ENST00000302851.7@ZNF561	ENST00000302851.7	protein_coding	9621162,9619432,9618091,9617045,9614021,9607332	9621399,9619582,9618179,9617171,9614103,9611336	Gene ID= ENSG00000171469.10 TPM= 2.12 Transcript Type= protein_coding
chr19	9758471	9768666	9758471	9768666	-	transcript1633.chr19.nic@ZNF846	transcript1633.chr19.nic	protein_coding	9768289,9764936,9763282,9762082,9759860,9758471	9768666,9765035,9763408,9762165,9759942,9758764	Gene ID= ENSG00000196605.7 TPM= 3.19 Transcript Type= NA
chr19	9787408	9793180	9787408	9793180	-	ENST00000589038.1@ZNF846	ENST00000589038.1	protein_coding	9792934,9787408	9793180,9787810	Gene ID= ENSG00000196605.7 TPM= 1.06 Transcript Type= processed_transcript
chr19	9810267	9819079	9810267	9819079	-	ENST00000589626.5@FBXL12	ENST00000589626.5	protein_coding	9818728,9818545,9813231,9810267	9819079,9818617,9813274,9811717	Gene ID= ENSG00000127452.8 TPM= 13.81 Transcript Type= protein_coding
chr19	9810271	9819076	9810271	9819076	-	ENST00000588922.5@FBXL12	ENST00000588922.5	protein_coding	9818754,9818545,9810271	9819076,9818617,9811717	Gene ID= ENSG00000127452.8 TPM= 6.72 Transcript Type= protein_coding
chr19	9810267	9819055	9810267	9819055	-	ENST00000247977.8@FBXL12	ENST00000247977.8	protein_coding	9818728,9818545,9810267	9819055,9818617,9811717	Gene ID= ENSG00000127452.8 TPM= 15.22 Transcript Type= protein_coding
chr19	9810267	9818829	9810267	9818829	-	ENST00000586651.5@FBXL12	ENST00000586651.5	protein_coding	9818545,9810267	9818829,9811717	Gene ID= ENSG00000127452.8 TPM= 4.6 Transcript Type= protein_coding
chr19	9827892	9830115	9827892	9830115	+	ENST00000358666.7@UBL5	ENST00000358666.7	protein_coding	9827892,9828327,9828592,9828837,9829965	9828064,9828393,9828675,9828874,9830115	Gene ID= ENSG00000198258.10 TPM= 45.67 Transcript Type= protein_coding
chr19	9827894	9830115	9827894	9830115	+	ENST00000590068.1@UBL5	ENST00000590068.1	protein_coding	9827894,9828327,9828592,9828837,9829965	9827943,9828393,9828675,9828874,9830115	Gene ID= ENSG00000198258.10 TPM= 14.87 Transcript Type= protein_coding
chr19	9827892	9830114	9827892	9830114	+	ENST00000586895.5@UBL5	ENST00000586895.5	protein_coding	9827892,9828327,9828592,9828837,9829965	9827984,9828393,9828675,9828874,9830114	Gene ID= ENSG00000198258.10 TPM= 235.09 Transcript Type= protein_coding
chr19	9835327	9849682	9835327	9849682	+	transcript1647.chr19.nnic@PIN1	transcript1647.chr19.nnic	protein_coding	9835327,9836823,9838012,9838436,9848030,9849090	9835402,9836875,9838075,9838648,9848140,9849682	Gene ID= ENSG00000127445.13 TPM= 6.99 Transcript Type= NA
chr19	9835323	9849682	9835323	9849682	+	ENST00000247970.8@PIN1	ENST00000247970.8	protein_coding	9835323,9838436,9848030,9849090	9835402,9838648,9848140,9849682	Gene ID= ENSG00000127445.13 TPM= 301.21 Transcript Type= protein_coding
chr19	9835341	9849682	9835341	9849682	+	ENST00000588695.5@PIN1	ENST00000588695.5	protein_coding	9835341,9838436,9848030,9849090,9849533	9835402,9838648,9848140,9849201,9849682	Gene ID= ENSG00000127445.13 TPM= 10.89 Transcript Type= protein_coding
chr19	10086130	10093245	10086130	10093245	+	ENST00000253110.15@C19orf66	ENST00000253110.15	protein_coding	10086130,10086929,10087251,10089657,10089898,10091250,10091476,10092070	10086448,10087052,10087300,10089695,10090047,10091353,10091630,10093245	Gene ID= ENSG00000130813.17 TPM= 10.09 Transcript Type= protein_coding
chr19	10086297	10093252	10086297	10093252	+	ENST00000585919.5@C19orf66	ENST00000585919.5	protein_coding	10086297,10086929,10087251,10089657,10089898,10091250,10092070	10086448,10087052,10087300,10089695,10090047,10091630,10093252	Gene ID= ENSG00000130813.17 TPM= 4.78 Transcript Type= retained_intron
chr19	10106303	10111296	10106303	10111296	+	transcript1679.chr19.nic@PPAN	transcript1679.chr19.nic	protein_coding	10106303,10106501,10107505,10107804,10107964,10109631,10109913,10110123,10110324,10110485,10110697,10110945	10106412,10106671,10107606,10107854,10108134,10109707,10110020,10110246,10110402,10110614,10110791,10111296	Gene ID= ENSG00000130810.19 TPM= 6.64 Transcript Type= NA
chr19	10106289	10111294	10106289	10111294	+	ENST00000253107.11@PPAN	ENST00000253107.11	protein_coding	10106289,10106501,10107505,10107804,10107964,10109631,10109913,10110123,10110324,10110485,10110697,10110945	10106412,10106671,10107606,10107854,10108134,10109707,10110020,10110246,10110402,10110614,10110866,10111294	Gene ID= ENSG00000130810.19 TPM= 79.22 Transcript Type= protein_coding
chr19	10106419	10111254	10106419	10111254	+	ENST00000393793.5@PPAN	ENST00000393793.5	protein_coding	10106419,10107505,10107804,10107964,10109631,10109913,10110123,10110324,10110485,10110697,10110945	10106671,10107606,10107854,10108134,10109707,10110020,10110246,10110402,10110614,10110866,10111254	Gene ID= ENSG00000130810.19 TPM= 1.06 Transcript Type= protein_coding
chr19	10113056	10118092	10113056	10118092	+	transcript1694.chr19.nnic@NA	transcript1694.chr19.nnic	NA	10113056	10118092	Gene ID= novel_gene_chr19_1695 TPM= 2.12 Transcript Type= NA
chr19	10115017	10119902	10115017	10119902	-	ENST00000253108.8@EIF3G	ENST00000253108.8	protein_coding	10119840,10119654,10119088,10118868,10118668,10117084,10116800,10115967,10115684,10115479,10115017	10119902,10119700,10119171,10118956,10118727,10117188,10116989,10116074,10115820,10115585,10115129	Gene ID= ENSG00000130811.11 TPM= 200.75 Transcript Type= protein_coding
chr19	10133346	10195135	10133346	10195135	-	ENST00000340748.8@DNMT1	ENST00000340748.8	protein_coding	10194820,10182041,10180778,10180350,10177292,10175540,10173871,10173090,10168330,10166598,10163326,10162667,10160384,10160018,10159842,10159658,10156391,10155853,10154905,10154586,10154293,10151750,10151398,10149853,10149453,10148884,10146351,10143766,10142028,10141105,10140781,10140046,10139676,10138439,10137832,10137085,10136121,10135736,10134217,10133346	10195135,10182077,10180885,10180569,10177367,10175618,10173905,10173174,10168364,10166685,10163360,10162748,10160418,10160063,10159922,10159767,10156509,10155945,10155056,10154773,10154479,10151847,10151545,10149968,10149657,10149017,10146524,10143987,10142220,10141189,10140909,10140328,10139817,10138605,10138009,10137280,10136287,10135852,10134307,10133701	Gene ID= ENSG00000130816.14 TPM= 12.75 Transcript Type= protein_coding
chr19	10251951	10259125	10251951	10259125	+	transcript1702.chr19.nic@MRPL4	transcript1702.chr19.nic	protein_coding	10251951,10252397,10252551,10254589,10256708,10258222,10258413	10252310,10252463,10252701,10254640,10256825,10258328,10259125	Gene ID= ENSG00000105364.13 TPM= 4.25 Transcript Type= NA
chr19	10251967	10260045	10251967	10260045	+	ENST00000253099.10@MRPL4	ENST00000253099.10	protein_coding	10251967,10252397,10252551,10254589,10256708,10258222,10258413,10258609,10259617	10252310,10252463,10252701,10254640,10256825,10258328,10258522,10258685,10260045	Gene ID= ENSG00000105364.13 TPM= 89.22 Transcript Type= protein_coding
chr19	10252010	10259125	10252010	10259125	+	ENST00000590669.5@MRPL4	ENST00000590669.5	protein_coding	10252010,10252397,10252551,10254589,10256708,10258222,10258413,10258609	10252310,10252463,10252701,10254640,10256825,10258328,10258522,10259125	Gene ID= ENSG00000105364.13 TPM= 6.37 Transcript Type= protein_coding
chr19	10286967	10288453	10286967	10288453	+	ENST00000380770.3@ICAM4	ENST00000380770.3	protein_coding	10286967,10287536,10287986	10287406,10287838,10288453	Gene ID= ENSG00000105371.8 TPM= 2.12 Transcript Type= protein_coding
chr19	10289981	10296778	10289981	10296778	+	ENST00000221980.4@ICAM5	ENST00000221980.4	protein_coding	10289981,10291072,10291489,10292035,10292612,10292998,10293698,10294040,10294401,10295346,10296339	10290125,10291341,10291809,10292322,10292866,10293246,10293943,10294318,10294640,10295612,10296778	Gene ID= ENSG00000105376.4 TPM= 2.12 Transcript Type= protein_coding
chr19	10304803	10309880	10304803	10309880	-	ENST00000403903.7@ZGLP1	ENST00000403903.7	protein_coding	10308185,10305846,10305390,10304803	10309880,10305952,10305483,10305208	Gene ID= ENSG00000220201.7 TPM= 1.06 Transcript Type= protein_coding
chr19	10310045	10316015	10310045	10316015	-	ENST00000393708.3@FDX2	ENST00000393708.3	protein_coding	10315852,10315705,10315386,10310853,10310045	10316015,10315759,10315492,10310940,10310642	Gene ID= ENSG00000267673.6 TPM= 11.68 Transcript Type= protein_coding
chr19	10333776	10339845	10333776	10339845	-	transcript1718.chr19.nic@ICAM3	transcript1718.chr19.nic	protein_coding	10339539,10338682,10334528,10334160,10333776	10339845,10338948,10335976,10334408,10334059	Gene ID= ENSG00000076662.9 TPM= 17.53 Transcript Type= NA
chr19	10333776	10339661	10333776	10339661	-	ENST00000587992.1@ICAM3	ENST00000587992.1	protein_coding	10339539,10338682,10334160,10333776	10339661,10338948,10335976,10334059	Gene ID= ENSG00000076662.9 TPM= 4.78 Transcript Type= retained_intron
chr19	10350533	10380676	10350533	10380676	-	ENST00000525621.5@TYK2	ENST00000525621.5	protein_coding	10380380,10379615,10378214,10368295,10368055,10366417,10365517,10364851,10364614,10362549,10362264,10362078,10361770,10361511,10359175,10358003,10357764,10356568,10354512,10354042,10353528,10352926,10352434,10351052,10350533	10380676,10379779,10378426,10368418,10368202,10366580,10365898,10365048,10364771,10362657,10362456,10362181,10361955,10361598,10359302,10358138,10357918,10356718,10354609,10354234,10353646,10353098,10352551,10351162,10350968	Gene ID= ENSG00000105397.13 TPM= 42.49 Transcript Type= protein_coding
chr19	10350532	10353915	10350532	10353915	-	transcript1742.chr19.nnic@TYK2	transcript1742.chr19.nnic	protein_coding	10353528,10350532	10353915,10350968	Gene ID= ENSG00000105397.13 TPM= 8.5 Transcript Type= NA
chr19	10391134	10403566	10391134	10403566	-	transcript1733.chr19.nic@CDC37	transcript1733.chr19.nic	protein_coding	10403378,10400575,10395928,10395228,10395021,10393259,10393086,10391134	10403566,10400693,10396203,10395543,10395143,10393441,10393157,10391706	Gene ID= ENSG00000105401.8 TPM= 7.97 Transcript Type= NA
chr19	10391134	10403533	10391134	10403533	-	ENST00000222005.6@CDC37	ENST00000222005.6	protein_coding	10403378,10395928,10395435,10395228,10395021,10393259,10393086,10391134	10403533,10396203,10395543,10395343,10395143,10393441,10393157,10391706	Gene ID= ENSG00000105401.8 TPM= 345.73 Transcript Type= protein_coding
chr19	10486120	10503741	10486120	10503741	-	ENST00000171111.9@KEAP1	ENST00000171111.9	protein_coding	10503241,10499395,10491577,10489648,10489192,10486120	10503741,10500080,10492262,10489853,10489368,10486818	Gene ID= ENSG00000079999.13 TPM= 34.28 Transcript Type= protein_coding
chr19	10512742	10517450	10512742	10517450	-	ENST00000333430.5@S1PR5	ENST00000333430.5	protein_coding	10517398,10512742	10517450,10515029	Gene ID= ENSG00000180739.13 TPM= 1.06 Transcript Type= protein_coding
chr19	10543884	10553418	10543884	10553418	+	transcript1778.chr19.nic@ATG4D	transcript1778.chr19.nic	protein_coding	10543884,10544709,10544957,10547189,10548904,10551897,10552045,10552205,10552885	10544325,10544866,10545130,10547253,10549034,10551975,10552121,10552324,10553418	Gene ID= ENSG00000130734.9 TPM= 9.29 Transcript Type= NA
chr19	10543894	10553418	10543894	10553418	+	transcript1784.chr19.nic@ATG4D	transcript1784.chr19.nic	protein_coding	10543894,10544783,10544957,10548904,10551897,10552045,10552205,10552885	10544325,10544866,10545130,10549034,10551975,10552121,10552324,10553418	Gene ID= ENSG00000130734.9 TPM= 11.95 Transcript Type= NA
chr19	10543918	10553418	10543918	10553418	+	ENST00000309469.8@ATG4D	ENST00000309469.8	protein_coding	10543918,10544783,10544957,10546839,10547189,10548904,10551897,10552045,10552205,10552885	10544325,10544866,10545130,10547115,10547253,10549034,10551975,10552121,10552324,10553418	Gene ID= ENSG00000130734.9 TPM= 66.65 Transcript Type= protein_coding
chr19	10543895	10553124	10543895	10553124	+	ENST00000586417.5@ATG4D	ENST00000586417.5	protein_coding	10543895,10544709,10544957,10546839,10547189,10548904,10551897,10552045,10552205,10552885	10544325,10544866,10545130,10547115,10547253,10549034,10551975,10552121,10552324,10553124	Gene ID= ENSG00000130734.9 TPM= 1.06 Transcript Type= nonsense_mediated_decay
chr19	10553078	10566037	10553078	10566037	-	ENST00000312962.10@KRI1	ENST00000312962.10	protein_coding	10565906,10565717,10564929,10562729,10561791,10561667,10561169,10561003,10560312,10559810,10559613,10559359,10558164,10557972,10557769,10557552,10555285,10555087,10553078	10566037,10565790,10565034,10562837,10561845,10561716,10561265,10561080,10560448,10559936,10559708,10559529,10558239,10558060,10557895,10557682,10555349,10555185,10554281	Gene ID= ENSG00000129347.19 TPM= 3.19 Transcript Type= protein_coding
chr19	10553576	10565971	10553576	10565971	-	ENST00000478863.5@KRI1	ENST00000478863.5	protein_coding	10565906,10565717,10564929,10562729,10561791,10561667,10561169,10561003,10560312,10559810,10559613,10559359,10558164,10557972,10557552,10555285,10555087,10553576	10565971,10565790,10565034,10562837,10561845,10561716,10561265,10561080,10560448,10559936,10559708,10559529,10558239,10558060,10557895,10555349,10555185,10554281	Gene ID= ENSG00000129347.19 TPM= 2.12 Transcript Type= retained_intron
chr19	10553577	10555225	10553577	10555225	-	transcript1787.chr19.nnic@NA	transcript1787.chr19.nnic	NA	10553577	10555225	Gene ID= novel_gene_chr19_1788 TPM= 3.19 Transcript Type= NA
chr19	10566462	10568978	10566462	10568978	-	ENST00000393599.2@CDKN2D	ENST00000393599.2	protein_coding	10568513,10566462	10568978,10567417	Gene ID= ENSG00000129355.6 TPM= 54.17 Transcript Type= protein_coding
chr19	10602366	10644557	10602366	10644557	+	transcript1793.chr19.nic@SLC44A2	transcript1793.chr19.nic	protein_coding	10602366,10626253,10627722,10627920,10631057,10631275,10631475,10631626,10631868,10632044,10634756,10634974,10635163,10635431,10636323,10636662,10637644,10637856,10638023,10638227,10642367,10642897,10643279	10602561,10626301,10627795,10628004,10631141,10631385,10631535,10631749,10631951,10632156,10634887,10635073,10635255,10635515,10636585,10636756,10637747,10637929,10638093,10638315,10642451,10643021,10644557	Gene ID= ENSG00000129353.14 TPM= 18.7 Transcript Type= NA
chr19	10602423	10644557	10602423	10644557	+	transcript1798.chr19.nic@SLC44A2	transcript1798.chr19.nic	protein_coding	10602423,10626253,10627722,10627920,10631057,10631275,10631475,10631626,10631868,10632044,10634756,10634974,10635163,10635431,10636323,10636662,10637644,10637856,10638023,10638227,10642367,10642897	10602561,10626301,10627795,10628004,10631141,10631385,10631535,10631749,10631951,10632156,10634887,10635073,10635255,10635515,10636585,10636756,10637747,10637929,10638093,10638315,10642451,10644557	Gene ID= ENSG00000129353.14 TPM= 18.97 Transcript Type= NA
chr19	10625258	10644559	10625258	10644559	+	ENST00000335757.9@SLC44A2	ENST00000335757.9	protein_coding	10625258,10626253,10627722,10627920,10631057,10631275,10631475,10631626,10631868,10632044,10634756,10634974,10635163,10635431,10636323,10636662,10637644,10637856,10638023,10638227,10642367,10643279	10625670,10626301,10627795,10628004,10631141,10631385,10631535,10631749,10631951,10632156,10634887,10635073,10635255,10635515,10636585,10636756,10637747,10637929,10638093,10638315,10642451,10644559	Gene ID= ENSG00000129353.14 TPM= 25.61 Transcript Type= protein_coding
chr19	10625525	10644557	10625525	10644557	+	ENST00000586078.5@SLC44A2	ENST00000586078.5	protein_coding	10625525,10626253,10627722,10627920,10631057,10631275,10631475,10631626,10631868,10632044,10634756,10634974,10635163,10635431,10636323,10636662,10637644,10637856,10638023,10638227,10642367,10642897	10625670,10626301,10627795,10628004,10631141,10631385,10631535,10631749,10631951,10632156,10634887,10635073,10635255,10635515,10636585,10636756,10637747,10637929,10638093,10638315,10642451,10644557	Gene ID= ENSG00000129353.14 TPM= 24.55 Transcript Type= protein_coding
chr19	10602510	10644550	10602510	10644550	+	ENST00000407327.8@SLC44A2	ENST00000407327.8	protein_coding	10602510,10626253,10627722,10627920,10631057,10631275,10631475,10631626,10631868,10632044,10634756,10634974,10635163,10635431,10636323,10636662,10637644,10637856,10638023,10638227,10642367,10643279	10602561,10626301,10627795,10628004,10631141,10631385,10631535,10631749,10631951,10632156,10634887,10635073,10635255,10635515,10636585,10636756,10637747,10637929,10638093,10638315,10642451,10644550	Gene ID= ENSG00000129353.14 TPM= 25.61 Transcript Type= protein_coding
chr19	10651862	10653844	10651862	10653844	-	ENST00000591501.1@ILF3-AS1	ENST00000591501.1	lincRNA	10651862	10653844	Gene ID= ENSG00000267100.1 TPM= 5.31 Transcript Type= lincRNA
chr19	10654306	10689846	10654306	10689846	+	transcript1814.chr19.nic@ILF3	transcript1814.chr19.nic	protein_coding	10654306,10670516,10670974,10671358,10677163,10678613,10679097,10679816,10680346,10681019,10681219,10681993,10682537,10683137,10683366,10683636,10683917,10687346,10688550,10689179	10654487,10670608,10671203,10671535,10677310,10678704,10679192,10679927,10680443,10681130,10681329,10682192,10682704,10683262,10683542,10683789,10683970,10687708,10688678,10689846	Gene ID= ENSG00000129351.17 TPM= 20.53 Transcript Type= NA
chr19	10654328	10685765	10654328	10685765	+	ENST00000407004.7@ILF3	ENST00000407004.7	protein_coding	10654328,10670516,10670974,10671358,10677163,10678613,10679097,10679816,10680346,10681019,10681219,10681993,10682537,10683125,10683366,10683636,10683917,10684416	10654487,10670608,10671203,10671535,10677310,10678704,10679192,10679927,10680443,10681130,10681329,10682192,10682704,10683262,10683542,10683789,10683970,10685765	Gene ID= ENSG00000129351.17 TPM= 32.22 Transcript Type= protein_coding
chr19	10701451	10713365	10701451	10713365	+	ENST00000250237.9@QTRT1	ENST00000250237.9	protein_coding	10701451,10701950,10702116,10707302,10707500,10712161,10712553,10712758,10712953,10713118	10701703,10702018,10702254,10707380,10707615,10712299,10712628,10712867,10713040,10713365	Gene ID= ENSG00000213339.8 TPM= 30.09 Transcript Type= protein_coding
chr19	10701453	10713365	10701453	10713365	+	transcript1836.chr19.nic@QTRT1	transcript1836.chr19.nic	protein_coding	10701453,10702116,10707302,10707500,10712161,10712758,10712953,10713118	10702018,10702254,10707380,10707615,10712628,10712867,10713040,10713365	Gene ID= ENSG00000213339.8 TPM= 9.91 Transcript Type= NA
chr19	10701430	10713345	10701430	10713345	+	ENST00000589488.5@QTRT1	ENST00000589488.5	protein_coding	10701430,10701950,10702116,10707302,10707500,10712161,10712758,10712953,10713118	10701703,10702018,10702254,10707380,10707615,10712628,10712867,10713040,10713345	Gene ID= ENSG00000213339.8 TPM= 2.47 Transcript Type= retained_intron
chr19	10707951	10708492	10707951	10708492	-	transcript1854.chr19.nnic@NA	transcript1854.chr19.nnic	NA	10707951	10708492	Gene ID= novel_gene_chr19_1855 TPM= 3.19 Transcript Type= NA
chr19	10717977	10831903	10717977	10831903	+	transcript1807.chr19.nic@DNM2	transcript1807.chr19.nic	protein_coding	10717977,10759738,10772479,10775703,10777118,10782960,10786564,10793720,10795372,10797380,10798486,10802288,10803639,10805916,10808569,10812264,10819980,10823788,10825057,10829036,10830127,10830978	10718403,10759811,10772628,10775906,10777216,10783120,10786706,10793855,10795439,10797518,10798572,10802358,10803668,10805967,10808580,10812377,10820089,10823899,10825221,10829268,10830378,10831903	Gene ID= ENSG00000079805.16 TPM= 35.19 Transcript Type= NA
chr19	10718079	10833484	10718079	10833484	+	transcript1808.chr19.nic@DNM2	transcript1808.chr19.nic	protein_coding	10718079,10759738,10772479,10775703,10777118,10782960,10786564,10793720,10795372,10797380,10798486,10802288,10803639,10805916,10808569,10812264,10819980,10823788,10825057,10829036,10830127,10832304	10718403,10759811,10772628,10775906,10777216,10783120,10786706,10793855,10795439,10797518,10798572,10802358,10803668,10805967,10808580,10812377,10820089,10823899,10825221,10829268,10830378,10833484	Gene ID= ENSG00000079805.16 TPM= 8.36 Transcript Type= NA
chr19	10717977	10831903	10717977	10831903	+	transcript1809.chr19.nic@DNM2	transcript1809.chr19.nic	protein_coding	10717977,10759738,10772479,10775703,10777118,10782960,10786564,10793720,10795372,10796061,10798486,10802288,10803639,10805916,10812264,10819980,10823788,10825057,10829036,10830127,10830978	10718403,10759811,10772628,10775906,10777216,10783120,10786706,10793855,10795439,10796199,10798572,10802358,10803668,10805967,10812377,10820089,10823899,10825221,10829268,10830378,10831903	Gene ID= ENSG00000079805.16 TPM= 26.69 Transcript Type= NA
chr19	10830205	10831903	10830205	10831903	+	transcript1843.chr19.nnic@DNM2	transcript1843.chr19.nnic	protein_coding	10830205,10830252,10830978	10830213,10830378,10831903	Gene ID= ENSG00000079805.16 TPM= 49.57 Transcript Type= NA
chr19	10718093	10831884	10718093	10831884	+	ENST00000359692.10@DNM2	ENST00000359692.10	protein_coding	10718093,10759738,10772479,10775703,10777118,10782960,10786564,10793720,10795372,10796061,10798486,10802288,10805916,10812264,10819980,10823788,10825057,10829036,10830127,10830978	10718403,10759811,10772628,10775906,10777216,10783120,10786706,10793855,10795439,10796199,10798572,10802358,10805967,10812377,10820089,10823899,10825221,10829268,10830378,10831884	Gene ID= ENSG00000079805.16 TPM= 46.87 Transcript Type= protein_coding
chr19	10718131	10831903	10718131	10831903	+	ENST00000389253.8@DNM2	ENST00000389253.8	protein_coding	10718131,10759738,10772479,10775703,10777118,10782960,10786564,10793720,10795372,10797380,10798486,10802288,10805916,10808569,10812264,10819980,10823788,10825057,10829036,10830127,10830978	10718403,10759811,10772628,10775906,10777216,10783120,10786706,10793855,10795439,10797518,10798572,10802358,10805967,10808580,10812377,10820089,10823899,10825221,10829268,10830378,10831903	Gene ID= ENSG00000079805.16 TPM= 106.14 Transcript Type= protein_coding
chr19	10718163	10831895	10718163	10831895	+	ENST00000355667.10@DNM2	ENST00000355667.10	protein_coding	10718163,10759738,10772479,10775703,10777118,10782960,10786564,10793720,10795372,10796061,10798486,10802288,10805916,10808569,10812264,10819980,10823788,10825057,10829036,10830127,10830978	10718403,10759811,10772628,10775906,10777216,10783120,10786706,10793855,10795439,10796199,10798572,10802358,10805967,10808580,10812377,10820089,10823899,10825221,10829268,10830378,10831895	Gene ID= ENSG00000079805.16 TPM= 20.11 Transcript Type= protein_coding
chr19	10760829	10762273	10760829	10762273	-	transcript1848.chr19.nnic@NA	transcript1848.chr19.nnic	NA	10760829	10762273	Gene ID= novel_gene_chr19_1849 TPM= 10.62 Transcript Type= NA
chr19	10832438	10836290	10832438	10836290	-	ENST00000214869.6@TMED1	ENST00000214869.6	protein_coding	10836009,10835256,10834934,10832438	10836290,10835353,10835117,10833213	Gene ID= ENSG00000099203.6 TPM= 65.85 Transcript Type= protein_coding
chr19	10871513	10923070	10871513	10923070	+	ENST00000327064.8@CARM1	ENST00000327064.8	protein_coding	10871513,10904951,10908039,10909103,10912184,10913877,10916407,10916696,10919595,10919877,10920436,10920659,10920834,10921050,10921375,10921615	10871922,10905076,10908145,10909207,10912294,10914054,10916497,10916777,10919680,10919966,10920573,10920748,10920946,10921127,10921443,10923070	Gene ID= ENSG00000142453.11 TPM= 14.87 Transcript Type= protein_coding
chr19	10871703	10922721	10871703	10922721	+	ENST00000344150.8@CARM1	ENST00000344150.8	protein_coding	10871703,10904951,10908039,10909103,10912184,10913877,10916407,10916696,10919595,10919877,10920436,10920659,10920834,10921050,10921615	10871922,10905076,10908145,10909207,10912294,10914054,10916497,10916777,10919680,10919966,10920573,10920748,10920946,10921127,10922721	Gene ID= ENSG00000142453.11 TPM= 3.19 Transcript Type= protein_coding
chr19	10922185	10928681	10922185	10928681	-	ENST00000253031.6@YIPF2	ENST00000253031.6	protein_coding	10928585,10928380,10927799,10927630,10925686,10924076,10923833,10923495,10923272,10922185	10928681,10928440,10927959,10927716,10925773,10924192,10923999,10923677,10923407,10923174	Gene ID= ENSG00000130733.10 TPM= 15.05 Transcript Type= protein_coding
chr19	10922185	10928667	10922185	10928667	-	transcript1864.chr19.nic@YIPF2	transcript1864.chr19.nic	protein_coding	10928511,10928380,10927799,10927630,10925686,10924076,10923833,10923495,10923272,10922185	10928667,10928440,10927959,10927716,10925773,10924192,10923999,10923677,10923407,10923191	Gene ID= ENSG00000130733.10 TPM= 8.15 Transcript Type= NA
chr19	10922185	10928667	10922185	10928667	-	transcript1870.chr19.nic@YIPF2	transcript1870.chr19.nic	protein_coding	10928511,10928380,10927799,10925686,10924076,10923833,10923495,10923272,10922185	10928667,10928440,10927959,10925773,10924192,10923999,10923677,10923407,10923174	Gene ID= ENSG00000130733.10 TPM= 7.62 Transcript Type= NA
chr19	10922768	10928653	10922768	10928653	-	ENST00000586748.5@YIPF2	ENST00000586748.5	protein_coding	10928511,10928380,10927799,10927630,10925686,10924076,10923833,10923495,10923272,10922768	10928653,10928440,10927959,10927716,10925773,10924192,10923999,10923677,10923407,10923174	Gene ID= ENSG00000130733.10 TPM= 4.25 Transcript Type= protein_coding
chr19	10928733	10930254	10928733	10930254	+	ENST00000270502.6@TIMM29	ENST00000270502.6	protein_coding	10928733,10929014	10928916,10930254	Gene ID= ENSG00000142444.6 TPM= 35.05 Transcript Type= protein_coding
chr19	10961001	11062282	10961001	11062282	+	ENST00000429416.7@SMARCA4	ENST00000429416.7	protein_coding	10961001,10980777,10984121,10985273,10986189,10986905,10987666,10989317,10991150,10994828,10996213,10996494,11003029,11003340,11007902,11010381,11012949,11018957,11019591,11021725,11023518,11024331,11025422,11026300,11027784,11030730,11033290,11033767,11034123,11034914,11041307,11058255,11058788,11059753,11060045,11061784	10961174,10980852,10984373,10985405,10986593,10987003,10987924,10989443,10991323,10995001,10996380,10996544,11003159,11003397,11008023,11010531,11013112,11019023,11019701,11021967,11023631,11024438,11025508,11026346,11027950,11030893,11033517,11033865,11034200,11035132,11041560,11058363,11058889,11059885,11060187,11062282	Gene ID= ENSG00000127616.17 TPM= 12.93 Transcript Type= protein_coding
chr19	10960852	10996361	10960852	10996361	+	transcript1882.chr19.nic@SMARCA4	transcript1882.chr19.nic	protein_coding	10960852,10984121,10985273,10986189,10986905,10987666,10989317,10991150,10994828,10996213	10961174,10984373,10985405,10986593,10987003,10987924,10989443,10991323,10995001,10996361	Gene ID= ENSG00000127616.17 TPM= 53.64 Transcript Type= NA
chr19	10984152	11062282	10984152	11062282	+	ENST00000450717.7@SMARCA4	ENST00000450717.7	protein_coding	10984152,10985273,10986189,10986905,10987666,10989317,10991150,10994828,10996213,10996494,11003029,11003340,11007902,11010381,11012949,11018957,11019591,11021725,11023518,11024331,11025422,11026300,11027784,11030730,11033290,11033767,11034123,11034914,11039458,11041307,11058255,11058788,11059753,11060045,11061784	10984373,10985405,10986593,10987003,10987924,10989443,10991323,10995001,10996380,10996544,11003159,11003397,11008023,11010531,11013112,11019023,11019701,11021967,11023631,11024438,11025508,11026346,11027950,11030893,11033517,11033865,11034200,11035132,11039553,11041560,11058363,11058889,11059885,11060187,11062282	Gene ID= ENSG00000127616.17 TPM= 8.68 Transcript Type= protein_coding
chr19	10961001	11062059	10961001	11062059	+	ENST00000344626.8@SMARCA4	ENST00000344626.8	protein_coding	10961001,10984121,10985273,10986189,10986905,10987666,10989317,10991150,10994828,10996213,10996494,11003029,11003340,11007902,11010381,11012949,11018957,11019591,11021725,11023518,11024331,11025422,11026300,11027784,11030730,11033290,11033767,11034123,11034914,11041307,11058255,11058788,11059753,11060045,11061784	10961174,10984373,10985405,10986593,10987003,10987924,10989443,10991323,10995001,10996380,10996544,11003159,11003397,11008023,11010531,11013112,11019023,11019701,11021967,11023631,11024438,11025508,11026346,11027950,11030893,11033517,11033865,11034200,11035132,11041560,11058363,11058889,11059885,11060187,11062059	Gene ID= ENSG00000127616.17 TPM= 12.4 Transcript Type= protein_coding
chr19	10961974	10964851	10961974	10964851	-	transcript1888.chr19.nnic@NA	transcript1888.chr19.nnic	NA	10961974	10964851	Gene ID= novel_gene_chr19_1889 TPM= 6.37 Transcript Type= NA
chr19	11127240	11127932	11127240	11127932	-	transcript1896.chr19.nnic@NA	transcript1896.chr19.nnic	NA	11127240	11127932	Gene ID= novel_gene_chr19_1897 TPM= 4.25 Transcript Type= NA
chr19	11131545	11133559	11131545	11133559	+	transcript1894.chr19.nnic@NA	transcript1894.chr19.nnic	NA	11131545	11133559	Gene ID= novel_gene_chr19_1895 TPM= 2.12 Transcript Type= NA
chr19	11164267	11197581	11164267	11197581	-	transcript1903.chr19.nic@KANK2	transcript1903.chr19.nic	protein_coding	11197485,11196050,11195556,11194475,11192831,11178553,11178345,11176578,11175902,11174473,11172981,11170048,11169877,11164267	11197581,11196227,11195820,11194590,11194042,11178720,11178447,11176817,11175989,11174692,11173123,11170248,11169966,11166611	Gene ID= ENSG00000197256.10 TPM= 38.8 Transcript Type= NA
chr19	11164267	11197608	11164267	11197608	-	transcript1919.chr19.nic@KANK2	transcript1919.chr19.nic	protein_coding	11197485,11195556,11194475,11192831,11178553,11178345,11176578,11175902,11174473,11172981,11170048,11169877,11164267	11197608,11195820,11194590,11194042,11178720,11178447,11176817,11175989,11174692,11173123,11170248,11169966,11166611	Gene ID= ENSG00000197256.10 TPM= 67.8 Transcript Type= NA
chr19	11192432	11197581	11192432	11197581	-	transcript1960.chr19.nic@KANK2	transcript1960.chr19.nic	protein_coding	11197485,11196050,11195556,11194475,11192432	11197581,11196227,11195820,11194590,11194042	Gene ID= ENSG00000197256.10 TPM= 13.08 Transcript Type= NA
chr19	11196058	11197183	11196058	11197183	-	ENST00000589427.1@KANK2	ENST00000589427.1	protein_coding	11196058	11197183	Gene ID= ENSG00000197256.10 TPM= 2.12 Transcript Type= retained_intron
chr19	11164267	11197521	11164267	11197521	-	ENST00000586659.5@KANK2	ENST00000586659.5	protein_coding	11197485,11195622,11194475,11192831,11178553,11178345,11176578,11175902,11174473,11172981,11170048,11169877,11164267	11197521,11195820,11194590,11194042,11178720,11178447,11176817,11175989,11174692,11173123,11170248,11169966,11166611	Gene ID= ENSG00000197256.10 TPM= 166.2 Transcript Type= protein_coding
chr19	11199295	11203987	11199295	11203987	-	transcript1955.chr19.nic@DOCK6	transcript1955.chr19.nic	protein_coding	11203282,11202584,11202394,11201889,11200909,11200716,11200308,11199295	11203987,11202715,11202483,11202125,11201052,11200822,11200469,11199539	Gene ID= ENSG00000130158.13 TPM= 12.75 Transcript Type= NA
chr19	11199295	11203802	11199295	11203802	-	transcript1957.chr19.nic@DOCK6	transcript1957.chr19.nic	protein_coding	11202394,11201889,11200909,11200716,11200308,11199295	11203802,11202125,11201052,11200822,11200469,11199539	Gene ID= ENSG00000130158.13 TPM= 5.31 Transcript Type= NA
chr19	11203590	11206402	11203590	11206402	+	transcript1968.chr19.nic@AC011472.1	transcript1968.chr19.nic	antisense_RNA	11203590,11205810	11203865,11206402	Gene ID= ENSG00000267082.1 TPM= 5.31 Transcript Type= NA
chr19	11208280	11210872	11208280	11210872	-	transcript1973.chr19.nnic@NA	transcript1973.chr19.nnic	NA	11208280	11210872	Gene ID= novel_gene_chr19_1974 TPM= 13.81 Transcript Type= NA
chr19	11229135	11230063	11229135	11230063	+	transcript1971.chr19.nnic@NA	transcript1971.chr19.nnic	NA	11229135	11230063	Gene ID= novel_gene_chr19_1972 TPM= 5.31 Transcript Type= NA
chr19	11322046	11339668	11322046	11339668	-	ENST00000222120.7@RAB3D	ENST00000222120.7	protein_coding	11339469,11337172,11335665,11335447,11322046	11339668,11337460,11335783,11335571,11325585	Gene ID= ENSG00000105514.7 TPM= 5.31 Transcript Type= protein_coding
chr19	11342778	11346285	11342778	11346285	-	ENST00000586956.5@TMEM205	ENST00000586956.5	protein_coding	11346008,11345520,11345252,11342778	11346285,11345737,11345415,11343120	Gene ID= ENSG00000105518.13 TPM= 2.97 Transcript Type= protein_coding
chr19	11342785	11346248	11342785	11346248	-	ENST00000588560.5@TMEM205	ENST00000588560.5	protein_coding	11346127,11345520,11345252,11342785	11346248,11345737,11345415,11343120	Gene ID= ENSG00000105518.13 TPM= 16.78 Transcript Type= protein_coding
chr19	11342776	11346300	11342776	11346300	-	ENST00000593256.6@TMEM205	ENST00000593256.6	protein_coding	11346127,11345520,11345252,11342776	11346300,11345628,11345415,11343120	Gene ID= ENSG00000105518.13 TPM= 50.77 Transcript Type= protein_coding
chr19	11342778	11346268	11342778	11346268	-	ENST00000586590.5@TMEM205	ENST00000586590.5	protein_coding	11346208,11345520,11345252,11342778	11346268,11345628,11345415,11343120	Gene ID= ENSG00000105518.13 TPM= 10.41 Transcript Type= protein_coding
chr19	11342779	11346271	11342779	11346271	-	ENST00000589555.5@TMEM205	ENST00000589555.5	protein_coding	11346208,11345520,11345252,11342779	11346271,11345737,11345415,11343120	Gene ID= ENSG00000105518.13 TPM= 5.1 Transcript Type= protein_coding
chr19	11355386	11365698	11355386	11365698	+	ENST00000251473.9@PLPPR2	ENST00000251473.9	protein_coding	11355386,11356802,11357660,11359532,11359821,11361217,11362513,11363713,11364161,11364347	11355572,11356976,11357739,11359720,11359956,11361488,11362689,11363819,11364212,11365698	Gene ID= ENSG00000105520.10 TPM= 28.68 Transcript Type= protein_coding
chr19	11374685	11376951	11374685	11376951	+	ENST00000312423.2@SWSAP1	ENST00000312423.2	protein_coding	11374685,11375513	11374929,11376951	Gene ID= ENSG00000173928.2 TPM= 1.06 Transcript Type= protein_coding
chr19	11435615	11450968	11435615	11450968	+	transcript2001.chr19.nic@PRKCSH	transcript2001.chr19.nic	protein_coding	11435615,11436041,11436389,11437876,11438067,11441240,11442386,11445389,11446272,11447074,11447439,11447693,11448222,11448540,11448914,11449076,11449266,11450646	11435706,11436196,11436505,11437971,11438124,11441357,11442515,11445473,11446350,11447160,11447597,11447789,11448291,11448629,11448988,11449175,11449428,11450968	Gene ID= ENSG00000130175.9 TPM= 18.24 Transcript Type= NA
chr19	11435635	11450968	11435635	11450968	+	ENST00000592741.5@PRKCSH	ENST00000592741.5	protein_coding	11435635,11436041,11436389,11437876,11438067,11441240,11442386,11445389,11446272,11447074,11447439,11447693,11448222,11448540,11448914,11449076,11449266,11450646	11435710,11436196,11436505,11437971,11438124,11441357,11442515,11445473,11446350,11447160,11447618,11447789,11448291,11448629,11448988,11449175,11449428,11450968	Gene ID= ENSG00000130175.9 TPM= 28.33 Transcript Type= protein_coding
chr19	11483427	11505923	11483427	11505923	-	ENST00000293771.9@ZNF653	ENST00000293771.9	protein_coding	11505488,11498296,11495950,11487292,11486987,11486769,11485656,11484042,11483427	11505923,11498339,11496165,11487903,11487158,11486880,11485770,11484141,11483859	Gene ID= ENSG00000161914.9 TPM= 8.5 Transcript Type= protein_coding
chr19	11505929	11529146	11505929	11529146	-	transcript2022.chr19.nic@ECSIT	transcript2022.chr19.nic	protein_coding	11529062,11513804,11513056,11507991,11507702,11507457,11505929	11529146,11514221,11513279,11508048,11507850,11507562,11506428	Gene ID= ENSG00000130159.13 TPM= 11.03 Transcript Type= NA
chr19	11505916	11529174	11505916	11529174	-	ENST00000270517.11@ECSIT	ENST00000270517.11	protein_coding	11529062,11519075,11513804,11513056,11507991,11507702,11507457,11505916	11529174,11519193,11514221,11513279,11508048,11507850,11507562,11506428	Gene ID= ENSG00000130159.13 TPM= 251.07 Transcript Type= protein_coding
chr19	11505929	11529137	11505929	11529137	-	ENST00000252440.11@ECSIT	ENST00000252440.11	protein_coding	11529062,11519075,11513804,11513056,11507991,11507457,11505929	11529137,11519193,11514221,11513279,11508048,11507562,11506428	Gene ID= ENSG00000130159.13 TPM= 4.65 Transcript Type= protein_coding
chr19	11538717	11550323	11538717	11550323	+	ENST00000252456.6@CNN1	ENST00000252456.6	protein_coding	11538717,11541076,11546675,11546832,11547797,11549323,11549550	11538990,11541197,11546741,11546969,11547907,11549469,11550323	Gene ID= ENSG00000130176.7 TPM= 339.71 Transcript Type= protein_coding
chr19	11539869	11550323	11539869	11550323	+	transcript2032.chr19.nic@CNN1	transcript2032.chr19.nic	protein_coding	11539869,11541076,11546675,11546832,11547797,11549323,11549550	11540021,11541197,11546741,11546969,11547907,11549469,11550323	Gene ID= ENSG00000130176.7 TPM= 181.45 Transcript Type= NA
chr19	11553047	11559241	11553047	11559241	-	transcript2036.chr19.nnic@ELOF1	transcript2036.chr19.nnic	protein_coding	11559191,11555174,11554232,11554011,11553047	11559241,11555253,11554365,11554081,11553810	Gene ID= ENSG00000130165.10 TPM= 9.56 Transcript Type= NA
chr19	11553043	11559236	11553043	11559236	-	ENST00000252445.7@ELOF1	ENST00000252445.7	protein_coding	11559191,11554232,11554011,11553043	11559236,11554365,11554081,11553810	Gene ID= ENSG00000130165.10 TPM= 22.31 Transcript Type= protein_coding
chr19	11597420	11619135	11597420	11619135	+	ENST00000361113.9@ZNF627	ENST00000361113.9	protein_coding	11597420,11614527,11614827,11616695	11597630,11614653,11614887,11619135	Gene ID= ENSG00000198551.9 TPM= 7.44 Transcript Type= protein_coding
chr19	11721265	11738986	11721265	11738986	-	transcript2049.chr19.nnic@ZNF823	transcript2049.chr19.nnic	protein_coding	11738817,11725201,11724194,11722954,11721265	11738986,11725327,11724254,11723342,11722835	Gene ID= ENSG00000197933.12 TPM= 2.12 Transcript Type= NA
chr19	11721265	11738973	11721265	11738973	-	ENST00000341191.10@ZNF823	ENST00000341191.10	protein_coding	11738817,11725201,11724194,11721265	11738973,11725327,11724254,11723342	Gene ID= ENSG00000197933.12 TPM= 2.12 Transcript Type= protein_coding
chr19	11767092	11784078	11767092	11784078	+	ENST00000357901.4@ZNF441	ENST00000357901.4	protein_coding	11767092,11777611,11778330,11780019	11767196,11777737,11778393,11784078	Gene ID= ENSG00000197044.10 TPM= 2.12 Transcript Type= protein_coding
chr19	11863154	11865153	11863154	11865153	-	transcript2063.chr19.nnic@NA	transcript2063.chr19.nnic	NA	11863154	11865153	Gene ID= novel_gene_chr19_2064 TPM= 3.19 Transcript Type= NA
chr19	11965054	11980381	11965054	11980381	+	ENST00000343949.9@ZNF763	ENST00000343949.9	protein_coding	11965054,11977029,11977371,11978116	11965211,11977164,11977431,11980381	Gene ID= ENSG00000197054.11 TPM= 1.06 Transcript Type= protein_coding
chr19	11987679	12046275	11987679	12046275	+	ENST00000476474.5@AC008770.1	ENST00000476474.5	processed_transcript	11987679,12001774,12035554,12046082	11987823,12001822,12035772,12046275	Gene ID= ENSG00000219665.8 TPM= 1.06 Transcript Type= antisense_RNA
chr19	12014732	12035688	12014732	12035688	-	ENST00000419886.6@ZNF433	ENST00000419886.6	protein_coding	12035537,12034828,12018166,12017876,12014732	12035688,12034874,12018292,12017936,12016666	Gene ID= ENSG00000197647.11 TPM= 1.06 Transcript Type= protein_coding
chr19	12016404	12035678	12016404	12035678	-	ENST00000552904.5@ZNF433	ENST00000552904.5	protein_coding	12035547,12018166,12017876,12016404	12035678,12018292,12017936,12016666	Gene ID= ENSG00000197647.11 TPM= 2.12 Transcript Type= protein_coding
chr19	12131350	12140407	12131350	12140407	-	ENST00000334213.9@ZNF20	ENST00000334213.9	protein_coding	12140180,12135769,12135500,12131350	12140407,12135904,12135560,12133985	Gene ID= ENSG00000132010.15 TPM= 1.06 Transcript Type= protein_coding
chr19	12144890	12156714	12144890	12156714	-	ENST00000455799.1@ZNF625	ENST00000455799.1	protein_coding	12156556,12147680,12147395,12144890	12156714,12147802,12147455,12146224	Gene ID= ENSG00000257591.5 TPM= 1.06 Transcript Type= protein_coding
chr19	12163064	12189881	12163064	12189881	+	ENST00000343979.5@ZNF136	ENST00000343979.5	protein_coding	12163064,12185785,12186114,12186570	12163206,12185911,12186174,12189881	Gene ID= ENSG00000196646.11 TPM= 2.12 Transcript Type= protein_coding
chr19	12240218	12242572	12240218	12242572	+	transcript2083.chr19.nnic@NA	transcript2083.chr19.nnic	NA	12240218	12242572	Gene ID= novel_gene_chr19_2084 TPM= 2.12 Transcript Type= NA
chr19	12243133	12247809	12243133	12247809	-	transcript2085.chr19.nnic@NA	transcript2085.chr19.nnic	NA	12243133	12247809	Gene ID= novel_gene_chr19_2086 TPM= 2.12 Transcript Type= NA
chr19	12317477	12333688	12317477	12333688	-	ENST00000293725.9@ZNF563	ENST00000293725.9	protein_coding	12333480,12322585,12321272,12317477	12333688,12322711,12321332,12319833	Gene ID= ENSG00000188868.13 TPM= 2.12 Transcript Type= protein_coding
chr19	12390016	12401271	12390016	12401271	-	ENST00000430385.3@ZNF799	ENST00000430385.3	protein_coding	12401068,12393297,12392603,12390016	12401271,12393423,12392663,12392206	Gene ID= ENSG00000196466.10 TPM= 1.06 Transcript Type= protein_coding
chr19	12577961	12610803	12577961	12610803	-	ENST00000311437.10@ZNF490	ENST00000311437.10	protein_coding	12610564,12609158,12583430,12582850,12577961	12610803,12609202,12583556,12582910,12581724	Gene ID= ENSG00000188033.9 TPM= 5.31 Transcript Type= protein_coding
chr19	12646513	12666742	12646513	12666742	-	ENST00000456935.6@MAN2B1	ENST00000456935.6	protein_coding	12666543,12665703,12665352,12664792,12663703,12663317,12661260,12658428,12658224,12658063,12657446,12656949,12656571,12655694,12652363,12652153,12650104,12649913,12649341,12649136,12648175,12647443,12647233,12646513	12666742,12665805,12665525,12664985,12663835,12663462,12661376,12658510,12658344,12658141,12657555,12657056,12656687,12655879,12652460,12652270,12650222,12650014,12649428,12649216,12648402,12647598,12647335,12646732	Gene ID= ENSG00000104774.12 TPM= 25.49 Transcript Type= protein_coding
chr19	12646516	12666734	12646516	12666734	-	ENST00000221363.8@MAN2B1	ENST00000221363.8	protein_coding	12666543,12665703,12665352,12664792,12663703,12663317,12661260,12658428,12658224,12658063,12657446,12656949,12656571,12655694,12652363,12652153,12650104,12649913,12649341,12649136,12648175,12647443,12647233,12646516	12666734,12665805,12665525,12664985,12663835,12663462,12661376,12658507,12658344,12658141,12657555,12657056,12656687,12655879,12652460,12652270,12650222,12650014,12649428,12649216,12648402,12647598,12647335,12646732	Gene ID= ENSG00000104774.12 TPM= 3.19 Transcript Type= protein_coding
chr19	12666800	12675832	12666800	12675832	+	ENST00000418543.7@WDR83	ENST00000418543.7	protein_coding	12666800,12668508,12669755,12669977,12670180,12670563,12670695,12672847,12673008,12673202,12675523	12666992,12668627,12669893,12670097,12670285,12670611,12670821,12672914,12673116,12673316,12675832	Gene ID= ENSG00000123154.11 TPM= 12.21 Transcript Type= protein_coding
chr19	12666807	12675832	12666807	12675832	+	transcript2110.chr19.nic@WDR83	transcript2110.chr19.nic	protein_coding	12666807,12668508,12669755,12669977,12670180,12672847,12673008,12673202,12675523	12666992,12668627,12669893,12670097,12670285,12672914,12673116,12673316,12675832	Gene ID= ENSG00000123154.11 TPM= 2.66 Transcript Type= NA
chr19	12675721	12681902	12675721	12681902	-	ENST00000210060.11@DHPS	ENST00000210060.11	protein_coding	12681560,12680161,12679801,12679623,12679457,12677291,12677108,12676017,12675721	12681902,12680325,12679922,12679719,12679543,12677396,12677211,12676142,12675933	Gene ID= ENSG00000095059.15 TPM= 54.56 Transcript Type= protein_coding
chr19	12675722	12681898	12675722	12681898	-	transcript2113.chr19.nic@DHPS	transcript2113.chr19.nic	protein_coding	12681560,12680196,12679801,12679623,12679457,12677291,12677108,12676017,12675722	12681898,12680325,12679922,12679719,12679543,12677396,12677211,12676142,12675933	Gene ID= ENSG00000095059.15 TPM= 4.64 Transcript Type= NA
chr19	12675722	12681898	12675722	12681898	-	transcript2115.chr19.nic@DHPS	transcript2115.chr19.nic	protein_coding	12681560,12680161,12679801,12679623,12679457,12677291,12676017,12675722	12681898,12680325,12679922,12679719,12679543,12677396,12676078,12675933	Gene ID= ENSG00000095059.15 TPM= 2.3 Transcript Type= NA
chr19	12675722	12681898	12675722	12681898	-	transcript2118.chr19.nnic@DHPS	transcript2118.chr19.nnic	protein_coding	12681560,12680161,12679801,12679623,12679457,12676017,12675722	12681898,12680325,12679922,12679719,12679543,12676142,12675933	Gene ID= ENSG00000095059.15 TPM= 4.64 Transcript Type= NA
chr19	12675722	12681898	12675722	12681898	-	transcript2119.chr19.nic@DHPS	transcript2119.chr19.nic	protein_coding	12681560,12680161,12679801,12679623,12679457,12676017,12675722	12681898,12680325,12679922,12679719,12679543,12677396,12675933	Gene ID= ENSG00000095059.15 TPM= 4.64 Transcript Type= NA
chr19	12675722	12681898	12675722	12681898	-	transcript2120.chr19.nic@DHPS	transcript2120.chr19.nic	protein_coding	12681560,12680196,12679801,12679623,12679457,12676017,12675722	12681898,12680325,12679922,12679719,12679543,12677396,12675933	Gene ID= ENSG00000095059.15 TPM= 2.52 Transcript Type= NA
chr19	12675762	12681860	12675762	12681860	-	ENST00000601537.5@DHPS	ENST00000601537.5	protein_coding	12681560,12680161,12679801,12679623,12679457,12677291,12676017,12675762	12681860,12680325,12679922,12679719,12679543,12677396,12676142,12675933	Gene ID= ENSG00000095059.15 TPM= 8.5 Transcript Type= nonsense_mediated_decay
chr19	12675751	12676918	12675751	12676918	-	ENST00000600510.1@DHPS	ENST00000600510.1	protein_coding	12676017,12675751	12676918,12675933	Gene ID= ENSG00000095059.15 TPM= 1.06 Transcript Type= retained_intron
chr19	12688917	12696643	12688917	12696643	-	ENST00000393261.7@FBXW9	ENST00000393261.7	protein_coding	12696173,12694799,12694594,12691342,12691166,12689962,12689761,12689541,12689372,12688917	12696643,12694938,12694722,12691454,12691257,12690110,12689874,12689630,12689437,12689290	Gene ID= ENSG00000132004.12 TPM= 5.31 Transcript Type= protein_coding
chr19	12730640	12734775	12730640	12734775	-	ENST00000242784.4@TRIR	ENST00000242784.4	protein_coding	12734313,12731344,12730640	12734775,12731421,12731068	Gene ID= ENSG00000123144.10 TPM= 214.56 Transcript Type= protein_coding
chr19	12730640	12734657	12730640	12734657	-	ENST00000591254.1@TRIR	ENST00000591254.1	protein_coding	12734313,12731344,12730640	12734657,12731557,12731068	Gene ID= ENSG00000123144.10 TPM= 23.37 Transcript Type= nonsense_mediated_decay
chr19	12733082	12734727	12733082	12734727	-	transcript2137.chr19.nnic@NA	transcript2137.chr19.nnic	NA	12733082	12734727	Gene ID= novel_gene_chr19_2138 TPM= 4.25 Transcript Type= NA
chr19	12737139	12748323	12737139	12748323	+	ENST00000591090.5@ASNA1	ENST00000591090.5	protein_coding	12737139,12737459,12738511,12745377,12745609,12747197,12747395,12747973	12737193,12737666,12738658,12745525,12745759,12747304,12747592,12748323	Gene ID= ENSG00000198356.11 TPM= 90.28 Transcript Type= protein_coding
chr19	12763004	12775620	12763004	12775620	-	ENST00000264827.9@HOOK2	ENST00000264827.9	protein_coding	12775405,12774812,12774669,12772994,12772780,12772613,12772190,12771397,12771159,12770932,12769881,12768013,12767816,12767395,12766103,12765927,12765690,12764999,12764814,12763668,12763528,12763004	12775620,12774897,12774741,12773044,12772912,12772680,12772252,12771477,12771319,12771072,12770082,12768123,12767903,12767464,12766240,12766014,12765724,12765081,12764917,12763778,12763599,12763431	Gene ID= ENSG00000095066.11 TPM= 189.46 Transcript Type= protein_coding
chr19	12763003	12775577	12763003	12775577	-	transcript2142.chr19.nnic@HOOK2	transcript2142.chr19.nnic	protein_coding	12775405,12774812,12773645,12772994,12772780,12772613,12772190,12771397,12771159,12770932,12769881,12768013,12767816,12767395,12766103,12765927,12765690,12764999,12764814,12763668,12763528,12763003	12775577,12774897,12774741,12773044,12772912,12772680,12772252,12771477,12771319,12771072,12770082,12768123,12767903,12767464,12766240,12766014,12765724,12765081,12764917,12763778,12763599,12763431	Gene ID= ENSG00000095066.11 TPM= 12.34 Transcript Type= NA
chr19	12763003	12775577	12763003	12775577	-	transcript2145.chr19.nic@HOOK2	transcript2145.chr19.nic	protein_coding	12775405,12774812,12774635,12772994,12772780,12772613,12772190,12771397,12771159,12770932,12769881,12768013,12767816,12767395,12766103,12765927,12765690,12764999,12764814,12763668,12763528,12763003	12775577,12774897,12774741,12773044,12772912,12772680,12772252,12771477,12771319,12771072,12770082,12768123,12767903,12767464,12766240,12766014,12765724,12765081,12764917,12763778,12763599,12763431	Gene ID= ENSG00000095066.11 TPM= 24.03 Transcript Type= NA
chr19	12763003	12772421	12763003	12772421	-	transcript2161.chr19.nic@HOOK2	transcript2161.chr19.nic	protein_coding	12772190,12771397,12771159,12770932,12769881,12768013,12767816,12767395,12766103,12765927,12765690,12764999,12764814,12763668,12763528,12763003	12772421,12771477,12771319,12771072,12770082,12768123,12767903,12767464,12766240,12766014,12765724,12765081,12764917,12763778,12763599,12763431	Gene ID= ENSG00000095066.11 TPM= 24.61 Transcript Type= NA
chr19	12774078	12775544	12774078	12775544	-	ENST00000589134.5@HOOK2	ENST00000589134.5	protein_coding	12775405,12774812,12774078	12775544,12774897,12774741	Gene ID= ENSG00000095066.11 TPM= 12.75 Transcript Type= retained_intron
chr19	12791496	12793315	12791496	12793315	+	ENST00000302754.5@JUNB	ENST00000302754.5	protein_coding	12791496	12793315	Gene ID= ENSG00000171223.5 TPM= 504.53 Transcript Type= protein_coding
chr19	12796820	12801859	12796820	12801859	-	ENST00000301522.2@PRDX2	ENST00000301522.2	protein_coding	12801740,12801159,12800916,12800177,12799859,12796820	12801859,12801270,12801069,12800299,12799989,12797166	Gene ID= ENSG00000167815.11 TPM= 1502.96 Transcript Type= protein_coding
chr19	12796820	12801787	12796820	12801787	-	ENST00000334482.9@PRDX2	ENST00000334482.9	protein_coding	12801740,12801159,12800916,12800177,12796820	12801787,12801270,12801069,12800299,12797166	Gene ID= ENSG00000167815.11 TPM= 9.56 Transcript Type= protein_coding
chr19	12806580	12813637	12806580	12813637	+	ENST00000221486.4@RNASEH2A	ENST00000221486.4	protein_coding	12806580,12807008,12807206,12807419,12810071,12810317,12813083,12813328	12806800,12807079,12807329,12807506,12810208,12810404,12813206,12813637	Gene ID= ENSG00000104889.5 TPM= 6.37 Transcript Type= protein_coding
chr19	12875211	12881468	12875211	12881468	-	ENST00000222219.7@DNASE2	ENST00000222219.7	protein_coding	12881290,12880972,12880802,12878670,12878382,12875211	12881468,12881152,12880880,12878834,12878579,12876363	Gene ID= ENSG00000105612.8 TPM= 18.06 Transcript Type= protein_coding
chr19	12891133	12899969	12891133	12899969	+	transcript2198.chr19.nic@GCDH	transcript2198.chr19.nic	protein_coding	12891133,12891271,12891487,12891831,12892116,12892387,12893483,12895992,12896205,12896910,12897303,12897703,12899468	12891202,12891395,12891522,12891974,12892178,12892434,12893653,12896121,12896421,12897013,12897428,12897863,12899969	Gene ID= ENSG00000105607.12 TPM= 3.9 Transcript Type= NA
chr19	12891026	12899969	12891026	12899969	+	ENST00000222214.9@GCDH	ENST00000222214.9	protein_coding	12891026,12891271,12891487,12891831,12892116,12893483,12895992,12896205,12896910,12897303,12897703,12899468	12891202,12891395,12891522,12891974,12892178,12893653,12896121,12896421,12897013,12897428,12897863,12899969	Gene ID= ENSG00000105607.12 TPM= 49.57 Transcript Type= protein_coding
chr19	12891133	12899969	12891133	12899969	+	transcript2203.chr19.nic@GCDH	transcript2203.chr19.nic	protein_coding	12891133,12891271,12891487,12891831,12893483,12895992,12896205,12896910,12897303,12897703,12899468	12891202,12891395,12891522,12891974,12893653,12896121,12896421,12897013,12897428,12897863,12899969	Gene ID= ENSG00000105607.12 TPM= 3.9 Transcript Type= NA
chr19	12901809	12902373	12901809	12902373	+	transcript2207.chr19.nnic@NA	transcript2207.chr19.nnic	NA	12901809	12902373	Gene ID= novel_gene_chr19_2208 TPM= 2.12 Transcript Type= NA
chr19	12922480	12933715	12922480	12933715	-	ENST00000314606.8@FARSA	ENST00000314606.8	protein_coding	12933550,12930612,12930429,12930223,12928755,12928535,12928342,12925090,12924904,12924639,12924449,12924151,12922480	12933715,12930749,12930527,12930341,12928847,12928663,12928457,12925174,12925003,12924807,12924526,12924265,12922886	Gene ID= ENSG00000179115.10 TPM= 128.52 Transcript Type= protein_coding
chr19	12938607	12944489	12938607	12944489	+	ENST00000316448.9@CALR	ENST00000316448.9	protein_coding	12938607,12939134,12939428,12940053,12940243,12940541,12940744,12943537,12943713	12938770,12939235,12939631,12940147,12940452,12940654,12940887,12943629,12944489	Gene ID= ENSG00000179218.13 TPM= 271.91 Transcript Type= protein_coding
chr19	12942312	12943040	12942312	12943040	-	transcript2225.chr19.nnic@NA	transcript2225.chr19.nnic	NA	12942312	12943040	Gene ID= novel_gene_chr19_2226 TPM= 2.12 Transcript Type= NA
chr19	12942760	12943040	12942760	12943040	-	transcript2223.chr19.nnic@NA	transcript2223.chr19.nnic	NA	12942760	12943040	Gene ID= novel_gene_chr19_2224 TPM= 3.19 Transcript Type= NA
chr19	12945876	12953623	12945876	12953623	+	ENST00000316856.7@RAD23A	ENST00000316856.7	protein_coding	12945876,12947848,12948177,12948497,12948686,12949081,12949278,12952689,12952936	12946020,12948009,12948358,12948552,12948813,12949159,12949408,12952853,12953623	Gene ID= ENSG00000179262.9 TPM= 105.33 Transcript Type= protein_coding
chr19	12945888	12953642	12945888	12953642	+	ENST00000586534.5@RAD23A	ENST00000586534.5	protein_coding	12945888,12947848,12948177,12948497,12948686,12949081,12949275,12952689,12952936	12946020,12948009,12948358,12948552,12948813,12949159,12949408,12952853,12953642	Gene ID= ENSG00000179262.9 TPM= 52.4 Transcript Type= protein_coding
chr19	12945867	12946475	12945867	12946475	+	transcript2250.chr19.nnic@NA	transcript2250.chr19.nnic	NA	12945867	12946475	Gene ID= novel_gene_chr19_2251 TPM= 4.25 Transcript Type= NA
chr19	12954158	12969738	12954158	12969738	-	transcript2248.chr19.nnic@GADD45GIP1	transcript2248.chr19.nnic	protein_coding	12969582,12954158	12969738,12954526	Gene ID= ENSG00000179271.2 TPM= 41.42 Transcript Type= NA
chr19	12953119	12957236	12953119	12957236	-	ENST00000316939.2@GADD45GIP1	ENST00000316939.2	protein_coding	12956863,12953119	12957236,12954526	Gene ID= ENSG00000179271.2 TPM= 91.35 Transcript Type= protein_coding
chr19	12969482	12974762	12969482	12974762	+	ENST00000317060.3@DAND5	ENST00000317060.3	protein_coding	12969482,12973389	12969984,12974762	Gene ID= ENSG00000179284.5 TPM= 20.18 Transcript Type= protein_coding
chr19	13004822	13007322	13004822	13007322	-	transcript2256.chr19.nnic@NA	transcript2256.chr19.nnic	NA	13004822	13007322	Gene ID= novel_gene_chr19_2257 TPM= 2.12 Transcript Type= NA
chr19	13049597	13050681	13049597	13050681	-	transcript2258.chr19.nnic@NA	transcript2258.chr19.nnic	NA	13049597	13050681	Gene ID= novel_gene_chr19_2259 TPM= 2.12 Transcript Type= NA
chr19	13074706	13076513	13074706	13076513	-	transcript2260.chr19.nnic@NA	transcript2260.chr19.nnic	NA	13074706	13076513	Gene ID= novel_gene_chr19_2261 TPM= 3.19 Transcript Type= NA
chr19	13076376	13081146	13076376	13081146	+	transcript2252.chr19.nnic@NA	transcript2252.chr19.nnic	NA	13076376	13081146	Gene ID= novel_gene_chr19_2253 TPM= 3.19 Transcript Type= NA
chr19	13095840	13097066	13095840	13097066	+	transcript2254.chr19.nnic@NA	transcript2254.chr19.nnic	NA	13095840	13097066	Gene ID= novel_gene_chr19_2255 TPM= 2.12 Transcript Type= NA
chr19	13099033	13102867	13099033	13102867	-	ENST00000264824.4@LYL1	ENST00000264824.4	protein_coding	13102531,13100837,13100657,13099033	13102867,13101195,13100748,13099734	Gene ID= ENSG00000104903.4 TPM= 13.81 Transcript Type= protein_coding
chr19	13104907	13116749	13104907	13116749	-	transcript2268.chr19.nic@TRMT1	transcript2268.chr19.nic	protein_coding	13116653,13116146,13115997,13115626,13115279,13112896,13112705,13110158,13109915,13109769,13109550,13109381,13107751,13107574,13105267,13104907	13116749,13116431,13116052,13115768,13115466,13113011,13112817,13110306,13110001,13109838,13109684,13109466,13107859,13107650,13105606,13105081	Gene ID= ENSG00000104907.12 TPM= 9.03 Transcript Type= NA
chr19	13118337	13141141	13118337	13141141	+	ENST00000292431.4@NACC1	ENST00000292431.4	protein_coding	13118337,13135200,13136232,13137271,13137478,13138147	13118454,13136153,13136405,13137376,13137575,13141141	Gene ID= ENSG00000160877.5 TPM= 33.99 Transcript Type= protein_coding
chr19	13144058	13150381	13144058	13150381	-	transcript2275.chr19.nic@STX10	transcript2275.chr19.nic	protein_coding	13149728,13149499,13149029,13145288,13144764,13144577,13144058	13150381,13149593,13149091,13145395,13144870,13144671,13144486	Gene ID= ENSG00000104915.14 TPM= 16.64 Transcript Type= NA
chr19	13144062	13150381	13144062	13150381	-	transcript2278.chr19.nic@STX10	transcript2278.chr19.nic	protein_coding	13149728,13149499,13149029,13145288,13144764,13144062	13150381,13149593,13149091,13145395,13144870,13144671	Gene ID= ENSG00000104915.14 TPM= 2.84 Transcript Type= NA
chr19	13144089	13150238	13144089	13150238	-	ENST00000587230.5@STX10	ENST00000587230.5	protein_coding	13150139,13149728,13149499,13149029,13145288,13144764,13144577,13144089	13150238,13149897,13149593,13149091,13145395,13144870,13144671,13144486	Gene ID= ENSG00000104915.14 TPM= 27.62 Transcript Type= protein_coding
chr19	13144062	13150226	13144062	13150226	-	ENST00000589083.5@STX10	ENST00000589083.5	protein_coding	13150139,13149728,13149499,13149029,13145288,13144764,13144062	13150226,13149897,13149593,13149091,13145395,13144870,13144671	Gene ID= ENSG00000104915.14 TPM= 1.77 Transcript Type= protein_coding
chr19	13747779	13763292	13747779	13763292	+	ENST00000221554.12@CCDC130	ENST00000221554.12	protein_coding	13747779,13751608,13754289,13756197,13757418,13757786,13758868,13759100,13762299,13762590	13747954,13751811,13754342,13756279,13757473,13757846,13759010,13759272,13762437,13763292	Gene ID= ENSG00000104957.13 TPM= 17.53 Transcript Type= protein_coding
chr19	13761663	13763289	13761663	13763289	+	transcript2291.chr19.nnic@NA	transcript2291.chr19.nnic	NA	13761663	13763289	Gene ID= novel_gene_chr19_2292 TPM= 4.78 Transcript Type= NA
chr19	13767862	13773249	13767862	13773249	+	transcript2305.chr19.nic@MRI1	transcript2305.chr19.nic	protein_coding	13767862,13768824,13772121	13768737,13769048,13773249	Gene ID= ENSG00000037757.13 TPM= 10.62 Transcript Type= NA
chr19	13764549	13772866	13764549	13772866	+	ENST00000040663.7@MRI1	ENST00000040663.7	protein_coding	13764549,13764871,13765954,13768561,13768824,13772121	13764720,13765109,13766129,13768737,13769048,13772866	Gene ID= ENSG00000037757.13 TPM= 1.06 Transcript Type= protein_coding
chr19	13774168	13778461	13774168	13778461	+	ENST00000588234.5@C19orf53	ENST00000588234.5	protein_coding	13774168,13774652,13778052	13774574,13774707,13778461	Gene ID= ENSG00000104979.8 TPM= 157.2 Transcript Type= protein_coding
chr19	13774824	13778462	13774824	13778462	+	ENST00000593274.1@C19orf53	ENST00000593274.1	protein_coding	13774824,13778052	13774903,13778462	Gene ID= ENSG00000104979.8 TPM= 6.37 Transcript Type= protein_coding
chr19	13834516	13836289	13834516	13836289	-	ENST00000587762.1@AC020916.1	ENST00000587762.1	lincRNA	13834516	13836289	Gene ID= ENSG00000267519.5 TPM= 46.74 Transcript Type= lincRNA
chr19	13838522	13840939	13838522	13840939	+	transcript2309.chr19.nnic@NA	transcript2309.chr19.nnic	NA	13838522	13840939	Gene ID= novel_gene_chr19_2310 TPM= 10.62 Transcript Type= NA
chr19	13906201	13930879	13906201	13930879	+	ENST00000318003.11@CC2D1A	ENST00000318003.11	protein_coding	13906201,13909823,13912323,13912528,13913168,13913404,13918070,13918504,13918746,13918912,13919130,13919818,13920557,13920750,13923333,13923548,13923695,13926517,13926667,13926821,13926978,13927175,13927893,13928124,13929379,13929534,13930078,13930242,13930375	13906501,13909958,13912438,13912593,13913302,13913638,13918194,13918576,13918817,13919042,13919202,13919951,13920668,13920922,13923455,13923606,13923811,13926590,13926725,13926872,13927077,13927265,13928030,13928188,13929442,13929660,13930154,13930289,13930879	Gene ID= ENSG00000132024.17 TPM= 33.99 Transcript Type= protein_coding
chr19	13931472	13953381	13931472	13953381	-	ENST00000538517.6@PODNL1	ENST00000538517.6	protein_coding	13953119,13937785,13936367,13935980,13933878,13931472	13953381,13938006,13936460,13936044,13933993,13933455	Gene ID= ENSG00000132000.11 TPM= 1.06 Transcript Type= protein_coding
chr19	13952492	13961449	13952492	13961449	+	ENST00000254337.10@DCAF15	ENST00000254337.10	protein_coding	13952492,13954340,13954526,13955912,13956123,13956352,13959045,13959582,13959767,13959984,13960287,13960465,13960940	13952644,13954437,13954661,13956018,13956262,13956522,13959479,13959673,13959895,13960069,13960391,13960580,13961449	Gene ID= ENSG00000132017.10 TPM= 25.49 Transcript Type= protein_coding
chr19	14006100	14006311	14006100	14006311	-	transcript2329.chr19.nnic@NA	transcript2329.chr19.nnic	NA	14006100	14006311	Gene ID= novel_gene_chr19_2330 TPM= 2.12 Transcript Type= NA
chr19	14031748	14053216	14031748	14053216	+	ENST00000263379.3@IL27RA	ENST00000263379.3	protein_coding	14031748,14032386,14039508,14039753,14042453,14042716,14046154,14046430,14048981,14049156,14050758,14051607,14051880,14052096	14031972,14032503,14039665,14039910,14042612,14042789,14046337,14046618,14049082,14049314,14050883,14051700,14051973,14053216	Gene ID= ENSG00000104998.3 TPM= 6.37 Transcript Type= protein_coding
chr19	14072314	14075059	14072314	14075059	+	transcript2336.chr19.nic@MISP3	transcript2336.chr19.nic	protein_coding	14072314,14074390	14073877,14075059	Gene ID= ENSG00000141854.9 TPM= 4.25 Transcript Type= NA
chr19	14072774	14075062	14072774	14075062	+	ENST00000587086.2@MISP3	ENST00000587086.2	protein_coding	14072774,14074390,14074706	14073877,14074463,14075062	Gene ID= ENSG00000141854.9 TPM= 25.49 Transcript Type= protein_coding
chr19	14087840	14090825	14087840	14090825	-	transcript2367.chr19.nnic@SAMD1	transcript2367.chr19.nnic	protein_coding	14090708,14089785,14089068,14088880,14088671,14087840	14090825,14090575,14089362,14088976,14088782,14088575	Gene ID= ENSG00000141858.11 TPM= 153.48 Transcript Type= NA
chr19	14093267	14117776	14093267	14117776	-	transcript2348.chr19.nic@PRKACA	transcript2348.chr19.nic	protein_coding	14117502,14107348,14106760,14102816,14100826,14097764,14097579,14097361,14093267	14117776,14107409,14106888,14102914,14100908,14097890,14097674,14097483,14093792	Gene ID= ENSG00000072062.13 TPM= 3.37 Transcript Type= NA
chr19	14095125	14117776	14095125	14117776	-	transcript2349.chr19.nic@PRKACA	transcript2349.chr19.nic	protein_coding	14117502,14107348,14106760,14102816,14100826,14097764,14097579,14095125	14117776,14107409,14106888,14102914,14100908,14097890,14097674,14097483	Gene ID= ENSG00000072062.13 TPM= 3.37 Transcript Type= NA
chr19	14096352	14117776	14096352	14117776	-	transcript2357.chr19.nic@PRKACA	transcript2357.chr19.nic	protein_coding	14117502,14107348,14106760,14102816,14100826,14097764,14096352	14117776,14107409,14106888,14102914,14100908,14097890,14097674	Gene ID= ENSG00000072062.13 TPM= 2.3 Transcript Type= NA
chr19	14091688	14117744	14091688	14117744	-	ENST00000308677.8@PRKACA	ENST00000308677.8	protein_coding	14117502,14107348,14106760,14102816,14100826,14097764,14097579,14097361,14093628,14091688	14117744,14107409,14106888,14102914,14100908,14097890,14097674,14097483,14093792,14093237	Gene ID= ENSG00000072062.13 TPM= 515.33 Transcript Type= protein_coding
chr19	14149953	14206169	14149953	14206169	-	ENST00000361434.7@ADGRL1	ENST00000361434.7	protein_coding	14205985,14183533,14177531,14170682,14162606,14161312,14160593,14160112,14159735,14159401,14159090,14158338,14157882,14157251,14156925,14156658,14156110,14155359,14152784,14152517,14152309,14152133,14149953	14206169,14183697,14177744,14170791,14163406,14161626,14160696,14160297,14159773,14159584,14159215,14158552,14158052,14157460,14157145,14156724,14156201,14155527,14152912,14152613,14152437,14152150,14151615	Gene ID= ENSG00000072071.16 TPM= 16.99 Transcript Type= protein_coding
chr19	14381435	14408725	14381435	14408725	+	ENST00000357355.7@ADGRE5	ENST00000357355.7	protein_coding	14381435,14388450,14388702,14390924,14396342,14397658,14397889,14398062,14401386,14401653,14402597,14404383,14405748,14406331,14406700,14406869,14407061,14407908,14408092	14381545,14388500,14388818,14391079,14396473,14397804,14397935,14398139,14401563,14401760,14402862,14404562,14405939,14406557,14406766,14406960,14407229,14408009,14408725	Gene ID= ENSG00000123146.19 TPM= 10.09 Transcript Type= protein_coding
chr19	14381444	14408721	14381444	14408721	+	ENST00000242786.5@ADGRE5	ENST00000242786.5	protein_coding	14381444,14388450,14388702,14390924,14396342,14397077,14397658,14397889,14398062,14401386,14401653,14402597,14404383,14405748,14406331,14406700,14406869,14407061,14407908,14408092	14381545,14388500,14388818,14391079,14396473,14397223,14397804,14397935,14398139,14401563,14401760,14402862,14404562,14405939,14406557,14406766,14406960,14407229,14408009,14408721	Gene ID= ENSG00000123146.19 TPM= 6.9 Transcript Type= protein_coding
chr19	14408819	14419351	14408819	14419351	-	transcript2387.chr19.nic@DDX39A	transcript2387.chr19.nic	protein_coding	14419270,14413013,14412551,14411506,14410989,14410548,14410216,14409742,14409536,14409303,14409037,14408819	14419351,14413224,14412678,14411598,14411172,14410605,14410334,14409873,14409645,14409447,14409184,14408952	Gene ID= ENSG00000123136.14 TPM= 2.84 Transcript Type= NA
chr19	14408819	14419351	14408819	14419351	-	transcript2390.chr19.nic@DDX39A	transcript2390.chr19.nic	protein_coding	14419270,14413013,14412551,14411506,14410989,14410421,14409742,14409536,14409303,14409037,14408819	14419351,14413224,14412678,14411598,14411172,14410605,14410334,14409645,14409447,14409184,14408952	Gene ID= ENSG00000123136.14 TPM= 4.43 Transcript Type= NA
chr19	14408819	14419351	14408819	14419351	-	transcript2393.chr19.nic@DDX39A	transcript2393.chr19.nic	protein_coding	14419270,14413013,14412551,14411506,14410989,14409742,14409536,14409303,14409037,14408819	14419351,14413224,14412678,14411598,14411172,14410334,14409645,14409447,14409184,14408952	Gene ID= ENSG00000123136.14 TPM= 5.49 Transcript Type= NA
chr19	14408851	14419367	14408851	14419367	-	ENST00000242776.8@DDX39A	ENST00000242776.8	protein_coding	14419270,14413013,14412551,14411506,14410989,14410216,14409742,14409536,14409303,14409037,14408851	14419367,14413224,14412678,14411598,14411172,14410334,14409873,14409645,14409447,14409184,14408952	Gene ID= ENSG00000123136.14 TPM= 60.54 Transcript Type= protein_coding
chr19	14433357	14471859	14433357	14471859	+	ENST00000242783.10@PKN1	ENST00000242783.10	protein_coding	14433357,14441143,14443470,14446426,14450318,14450896,14451829,14458031,14458232,14463667,14463828,14464060,14467565,14467718,14467876,14469341,14469752,14469912,14470163,14470575,14470771,14471581	14433542,14441443,14443621,14446561,14450463,14451109,14452023,14458140,14458375,14463742,14463969,14464153,14467641,14467793,14467967,14469517,14469814,14469988,14470305,14470682,14470851,14471859	Gene ID= ENSG00000123143.12 TPM= 388.04 Transcript Type= protein_coding
chr19	14477762	14496132	14477762	14496132	-	ENST00000393033.8@GIPC1	ENST00000393033.8	protein_coding	14496037,14492857,14491656,14482689,14480593,14480305,14479412,14478684,14477762	14496132,14492912,14491743,14483006,14480778,14480485,14479524,14478765,14478567	Gene ID= ENSG00000123159.15 TPM= 122.68 Transcript Type= protein_coding
chr19	14487687	14489164	14487687	14489164	-	transcript2433.chr19.nnic@NA	transcript2433.chr19.nnic	NA	14487687	14489164	Gene ID= novel_gene_chr19_2434 TPM= 3.19 Transcript Type= NA
chr19	14514770	14518420	14514770	14518420	-	ENST00000254322.2@DNAJB1	ENST00000254322.2	protein_coding	14518139,14516466,14514770	14518420,14517046,14516170	Gene ID= ENSG00000132002.7 TPM= 235.8 Transcript Type= protein_coding
chr19	14529560	14565978	14529560	14565978	+	ENST00000215567.9@TECR	ENST00000215567.9	protein_coding	14529560,14562525,14563206,14563658,14563800,14563982,14564182,14564786,14564949,14565066,14565202,14565618,14565744	14529711,14562575,14563257,14563702,14563903,14564097,14564287,14564858,14564992,14565123,14565290,14565663,14565978	Gene ID= ENSG00000099797.13 TPM= 47.78 Transcript Type= protein_coding
chr19	14562036	14565980	14562036	14565980	+	transcript2447.chr19.nic@TECR	transcript2447.chr19.nic	protein_coding	14562036,14562525,14563206,14563658,14563800,14563982,14564182,14564786,14564949,14565066,14565202,14565618,14565744	14562121,14562575,14563257,14563702,14563903,14564097,14564287,14564858,14564992,14565123,14565290,14565663,14565980	Gene ID= ENSG00000099797.13 TPM= 21.05 Transcript Type= NA
chr19	14562237	14565980	14562237	14565980	+	transcript2449.chr19.nic@TECR	transcript2449.chr19.nic	protein_coding	14562237,14563206,14563658,14563800,14563982,14564182,14564786,14564949,14565066,14565202,14565618,14565744	14562575,14563257,14563702,14563903,14564097,14564287,14564858,14564992,14565123,14565290,14565663,14565980	Gene ID= ENSG00000099797.13 TPM= 28.49 Transcript Type= NA
chr19	14529595	14565977	14529595	14565977	+	ENST00000598987.5@TECR	ENST00000598987.5	protein_coding	14529595,14545114,14562525,14563206,14563658,14563800,14563982,14564182,14564786,14564949,14565066,14565202,14565618,14565744	14529711,14545180,14562575,14563257,14563702,14563903,14564097,14564287,14564858,14564992,14565123,14565290,14565663,14565977	Gene ID= ENSG00000099797.13 TPM= 14.15 Transcript Type= nonsense_mediated_decay
chr19	14529592	14565977	14529592	14565977	+	ENST00000596073.5@TECR	ENST00000596073.5	protein_coding	14529592,14562525,14563174,14563658,14563800,14563982,14564182,14564786,14564949,14565066,14565202,14565618,14565744	14529711,14562575,14563257,14563702,14563903,14564097,14564287,14564858,14564992,14565123,14565290,14565663,14565977	Gene ID= ENSG00000099797.13 TPM= 10.7 Transcript Type= protein_coding
chr19	14566078	14572062	14566078	14572062	-	ENST00000593353.5@NDUFB7	ENST00000593353.5	protein_coding	14571889,14566765,14566078	14572062,14566931,14566265	Gene ID= ENSG00000099795.6 TPM= 302.72 Transcript Type= nonsense_mediated_decay
chr19	14690050	14707876	14690050	14707876	+	transcript2458.chr19.nnic@ZNF333	transcript2458.chr19.nnic	protein_coding	14690050,14693451,14695010,14695566,14699199,14705054,14706686,14707735	14690150,14693494,14695133,14695661,14699281,14705170,14706773,14707876	Gene ID= ENSG00000160961.11 TPM= 2.12 Transcript Type= NA
chr19	14690050	14707262	14690050	14707262	+	transcript2461.chr19.nic@ZNF333	transcript2461.chr19.nic	protein_coding	14690050,14693451,14695010,14695566,14699199,14705054,14706686	14690150,14693494,14695133,14695661,14699281,14705170,14707262	Gene ID= ENSG00000160961.11 TPM= 2.12 Transcript Type= NA
chr19	15107403	15114988	15107403	15114988	+	ENST00000342784.6@SYDE1	ENST00000342784.6	protein_coding	15107403,15109056,15109704,15110521,15111313,15111632,15112346,15113560	15107521,15109397,15110348,15110735,15111439,15111792,15112571,15114988	Gene ID= ENSG00000105137.12 TPM= 20.18 Transcript Type= protein_coding
chr19	15114987	15125701	15114987	15125701	-	transcript2464.chr19.nic@ILVBL	transcript2464.chr19.nic	protein_coding	15125380,15124925,15123375,15123116,15122892,15122693,15119982,15119418,15119166,15117881,15116408,15116152,15116001,15115850,15115566,15114987	15125701,15125069,15123576,15123243,15123030,15122804,15120081,15119515,15119302,15118015,15116522,15116321,15116071,15115921,15115671,15115430	Gene ID= ENSG00000105135.15 TPM= 67.55 Transcript Type= NA
chr19	15114987	15125785	15114987	15125785	-	ENST00000263383.7@ILVBL	ENST00000263383.7	protein_coding	15125656,15124925,15123375,15123116,15122892,15122693,15119982,15119418,15119166,15117881,15116408,15116152,15116001,15115850,15115566,15114987	15125785,15125069,15123576,15123243,15123030,15122804,15120081,15119515,15119302,15118015,15116522,15116321,15116071,15115921,15115671,15115430	Gene ID= ENSG00000105135.15 TPM= 153.59 Transcript Type= protein_coding
chr19	15114987	15125683	15114987	15125683	-	transcript2470.chr19.nic@ILVBL	transcript2470.chr19.nic	protein_coding	15124925,15123375,15123116,15122892,15122693,15119982,15119418,15119166,15117881,15116408,15116152,15116001,15115850,15115566,15114987	15125683,15123576,15123243,15123030,15122804,15120081,15119515,15119302,15118015,15116522,15116321,15116071,15115921,15115671,15115430	Gene ID= ENSG00000105135.15 TPM= 33.56 Transcript Type= NA
chr19	15115016	15125722	15115016	15125722	-	ENST00000534378.5@ILVBL	ENST00000534378.5	protein_coding	15125656,15123375,15123116,15122892,15122693,15119982,15119418,15119166,15117881,15116408,15116152,15116001,15115850,15115566,15115016	15125722,15123576,15123243,15123030,15122804,15120081,15119515,15119302,15118015,15116522,15116321,15116071,15115921,15115671,15115430	Gene ID= ENSG00000105135.15 TPM= 1.06 Transcript Type= protein_coding
chr19	15114986	15117049	15114986	15117049	-	transcript2489.chr19.nnic@NA	transcript2489.chr19.nnic	NA	15114986	15117049	Gene ID= novel_gene_chr19_2490 TPM= 3.19 Transcript Type= NA
chr19	15226919	15232432	15226919	15232432	-	ENST00000221730.7@EPHX3	ENST00000221730.7	protein_coding	15231969,15231776,15231239,15230962,15227997,15227771,15226919	15232432,15231861,15231396,15231090,15228100,15227907,15227662	Gene ID= ENSG00000105131.7 TPM= 1.06 Transcript Type= protein_coding
chr19	15235519	15280451	15235519	15280451	-	ENST00000263377.6@BRD4	ENST00000263377.6	protein_coding	15280264,15272815,15268905,15267416,15265354,15264404,15263420,15256964,15256064,15255297,15254152,15244710,15244231,15242900,15239910,15239659,15239392,15239059,15238743,15235519	15280451,15273133,15269042,15267551,15265643,15264766,15263548,15257173,15256263,15255592,15254262,15244762,15244600,15243487,15240022,15239821,15239522,15239264,15238980,15238445	Gene ID= ENSG00000141867.17 TPM= 31.86 Transcript Type= protein_coding
chr19	15256099	15331906	15256099	15331906	-	ENST00000594841.5@BRD4	ENST00000594841.5	protein_coding	15331836,15272815,15268905,15267416,15265354,15264404,15263420,15256964,15256099	15331906,15273133,15269042,15267551,15265643,15264766,15263548,15257173,15256263	Gene ID= ENSG00000141867.17 TPM= 3.54 Transcript Type= protein_coding
chr19	15258621	15261220	15258621	15261220	-	transcript2521.chr19.nnic@NA	transcript2521.chr19.nnic	NA	15258621	15261220	Gene ID= novel_gene_chr19_2522 TPM= 5.31 Transcript Type= NA
chr19	15290588	15292813	15290588	15292813	+	transcript2519.chr19.nnic@NA	transcript2519.chr19.nnic	NA	15290588	15292813	Gene ID= novel_gene_chr19_2520 TPM= 7.44 Transcript Type= NA
chr19	15353521	15379808	15353521	15379808	-	transcript2499.chr19.nic@AKAP8	transcript2499.chr19.nic	protein_coding	15379713,15376976,15374603,15373786,15372851,15372218,15371952,15370146,15369067,15368235,15362110,15361729,15360848,15358967,15353521	15379808,15377014,15374635,15374065,15373340,15372347,15371998,15370179,15369224,15368322,15362251,15361822,15360978,15359062,15355370	Gene ID= ENSG00000105127.8 TPM= 6.37 Transcript Type= NA
chr19	15380050	15419044	15380050	15419044	-	transcript2525.chr19.nic@AKAP8L	transcript2525.chr19.nic	protein_coding	15418911,15410520,15404010,15403475,15401150,15400947,15400794,15400295,15399302,15398630,15397714,15397520,15397150,15380517,15380050	15419044,15410594,15404042,15403715,15401603,15401043,15400864,15400358,15399410,15398766,15397855,15397625,15397280,15380612,15380430	Gene ID= ENSG00000011243.17 TPM= 5.31 Transcript Type= NA
chr19	15380050	15419044	15380050	15419044	-	transcript2530.chr19.nic@AKAP8L	transcript2530.chr19.nic	protein_coding	15418911,15410520,15404010,15403475,15401150,15400947,15400794,15400295,15399302,15397714,15397520,15397150,15380517,15380050	15419044,15410594,15404042,15403555,15401603,15401043,15400864,15400358,15399410,15397855,15397625,15397280,15380612,15380430	Gene ID= ENSG00000011243.17 TPM= 7.08 Transcript Type= NA
chr19	15380048	15419054	15380048	15419054	-	ENST00000397410.9@AKAP8L	ENST00000397410.9	protein_coding	15418911,15410520,15404010,15403475,15401150,15400947,15400794,15400295,15399302,15397714,15397520,15397150,15380517,15380048	15419054,15410594,15404042,15403715,15401603,15401043,15400864,15400358,15399410,15397855,15397625,15397280,15380612,15380430	Gene ID= ENSG00000011243.17 TPM= 78.25 Transcript Type= protein_coding
chr19	15380050	15419044	15380050	15419044	-	transcript2533.chr19.nic@AKAP8L	transcript2533.chr19.nic	protein_coding	15418911,15410520,15404010,15403475,15401150,15400947,15400794,15400295,15397714,15397520,15397150,15380517,15380050	15419044,15410594,15404042,15403715,15401603,15401043,15400864,15400358,15399410,15397625,15397280,15380612,15380430	Gene ID= ENSG00000011243.17 TPM= 18.06 Transcript Type= NA
chr19	15380051	15418988	15380051	15418988	-	ENST00000593845.5@AKAP8L	ENST00000593845.5	protein_coding	15418911,15410520,15404010,15403475,15401150,15400947,15400794,15400295,15398630,15397714,15397520,15397150,15380517,15380051	15418988,15410594,15404042,15403715,15401603,15401043,15400864,15400358,15399410,15397855,15397625,15397280,15380612,15380430	Gene ID= ENSG00000011243.17 TPM= 3.19 Transcript Type= retained_intron
chr19	15422087	15432712	15422087	15432712	-	transcript2536.chr19.nic@WIZ	transcript2536.chr19.nic	protein_coding	15432434,15431012,15429586,15428110,15426982,15425241,15424613,15424183,15422087	15432712,15431182,15430089,15428508,15427533,15425768,15425032,15424378,15423235	Gene ID= ENSG00000011451.17 TPM= 30.8 Transcript Type= NA
chr19	15912573	15934835	15912573	15934835	-	ENST00000402119.8@CYP4F11	ENST00000402119.8	protein_coding	15934211,15929457,15927430,15927212,15924761,15923812,15922364,15922037,15914762,15914602,15914305,15912573	15934835,15929601,15927483,15927339,15924882,15924082,15922430,15922166,15914895,15914666,15914387,15913909	Gene ID= ENSG00000171903.16 TPM= 1.06 Transcript Type= protein_coding
chr19	16076329	16095508	16076329	16095508	+	transcript2549.chr19.nic@TPM4	transcript2549.chr19.nic	protein_coding	16076329,16081913,16086423,16088027,16089045,16093536,16093684,16095264	16076697,16082046,16086540,16088097,16089120,16093598,16093753,16095508	Gene ID= ENSG00000167460.14 TPM= 86.04 Transcript Type= NA
chr19	16076306	16103005	16076306	16103005	+	ENST00000300933.8@TPM4	ENST00000300933.8	protein_coding	16076306,16081913,16086423,16088027,16089045,16093536,16093684,16101264	16076697,16082046,16086540,16088097,16089120,16093598,16093753,16103005	Gene ID= ENSG00000167460.14 TPM= 171.01 Transcript Type= protein_coding
chr19	16111629	16134234	16111629	16134234	+	ENST00000300935.7@RAB8A	ENST00000300935.7	protein_coding	16111629,16118226,16121750,16125470,16127437,16128026,16129554,16132212	16112025,16118286,16121810,16125547,16127526,16128091,16129604,16134234	Gene ID= ENSG00000167461.11 TPM= 23.37 Transcript Type= protein_coding
chr19	16185418	16192046	16185418	16192046	+	ENST00000263384.11@FAM32A	ENST00000263384.11	protein_coding	16185418,16185624,16190520,16190887	16185516,16185765,16190573,16192046	Gene ID= ENSG00000105058.11 TPM= 71.16 Transcript Type= protein_coding
chr19	16197578	16245907	16197578	16245907	+	ENST00000291439.7@AP1M1	ENST00000291439.7	protein_coding	16197578,16203459,16206341,16208019,16209030,16226421,16227548,16228137,16228770,16233493,16234199,16234413	16198068,16203615,16206408,16208149,16209177,16226547,16227690,16228208,16228928,16233618,16234274,16245907	Gene ID= ENSG00000072958.8 TPM= 121.09 Transcript Type= protein_coding
chr19	16197934	16235345	16197934	16235345	+	ENST00000444449.6@AP1M1	ENST00000444449.6	protein_coding	16197934,16203459,16206341,16208019,16209030,16210360,16226421,16227548,16228137,16228770,16233493,16234199,16234413	16198068,16203615,16206408,16208149,16209177,16210395,16226547,16227690,16228208,16228928,16233618,16234274,16235345	Gene ID= ENSG00000072958.8 TPM= 13.28 Transcript Type= protein_coding
chr19	16324865	16327534	16324865	16327534	+	transcript2579.chr19.nic@KLF2	transcript2579.chr19.nic	protein_coding	16324865,16326856	16326032,16327534	Gene ID= ENSG00000127528.5 TPM= 68.51 Transcript Type= NA
chr19	16324833	16327532	16324833	16327532	+	transcript2580.chr19.nnic@NA	transcript2580.chr19.nnic	NA	16324833	16327532	Gene ID= novel_gene_chr19_2581 TPM= 7.97 Transcript Type= NA
chr19	16355239	16472009	16355239	16472009	-	transcript2582.chr19.nnic@EPS15L1	transcript2582.chr19.nnic	protein_coding	16471913,16442178,16441892,16440862,16437770,16436937,16434365,16428702,16425083,16421319,16417948,16417552,16413773,16404588,16403733,16402321,16395344,16393951,16392304,16386171,16385129,16377122,16373915,16361779,16355239	16472009,16442219,16441981,16440909,16437865,16436999,16434490,16428761,16425316,16421476,16418104,16417637,16413845,16404749,16403930,16402485,16395467,16394001,16392440,16386231,16385211,16377254,16373962,16361984,16355851	Gene ID= ENSG00000127527.13 TPM= 22.71 Transcript Type= NA
chr19	16355239	16472012	16355239	16472012	-	ENST00000455140.6@EPS15L1	ENST00000455140.6	protein_coding	16471913,16442178,16441892,16440862,16437770,16436937,16434365,16428702,16425083,16421319,16417948,16417552,16413773,16404588,16403733,16402321,16395344,16393951,16392304,16386171,16385129,16377122,16361779,16355239	16472012,16442219,16441981,16440909,16437865,16436999,16434490,16428761,16425316,16421476,16418104,16417637,16413845,16404749,16403930,16402485,16395467,16394001,16392440,16386231,16385211,16377254,16361984,16355851	Gene ID= ENSG00000127527.13 TPM= 9.95 Transcript Type= protein_coding
chr19	16361578	16472009	16361578	16472009	-	transcript2585.chr19.nnic@EPS15L1	transcript2585.chr19.nnic	protein_coding	16471913,16442178,16441892,16440862,16437770,16436937,16434365,16428702,16425083,16421319,16417948,16417552,16413773,16404588,16403733,16402321,16395344,16393951,16392304,16386171,16385129,16377122,16373915,16361578	16472009,16442219,16441981,16440909,16437865,16436999,16434490,16428761,16425316,16421476,16418104,16417637,16413845,16404749,16403930,16402485,16395467,16394001,16392440,16386231,16385211,16377254,16373962,16361984	Gene ID= ENSG00000127527.13 TPM= 11.03 Transcript Type= NA
chr19	16361581	16472085	16361581	16472085	-	ENST00000248070.10@EPS15L1	ENST00000248070.10	protein_coding	16471913,16442178,16441892,16440862,16437770,16436937,16434365,16428702,16425083,16421319,16417948,16417552,16413773,16404588,16403733,16402321,16395344,16393951,16392304,16386171,16385129,16377122,16361581	16472085,16442219,16441981,16440909,16437865,16436999,16434490,16428761,16425316,16421476,16418104,16417637,16413845,16404749,16403930,16402485,16395467,16394001,16392440,16386231,16385211,16377254,16361984	Gene ID= ENSG00000127527.13 TPM= 7.84 Transcript Type= protein_coding
chr19	16355247	16472009	16355247	16472009	-	transcript2590.chr19.nnic@EPS15L1	transcript2590.chr19.nnic	protein_coding	16471913,16442178,16441892,16440862,16437770,16436937,16434365,16428702,16425083,16421319,16417948,16417552,16413773,16404588,16403733,16402321,16395344,16393951,16392304,16386171,16385129,16355247	16472009,16442219,16441981,16440909,16437865,16436999,16434490,16428761,16425316,16421476,16418104,16417637,16413845,16404749,16403930,16402485,16395467,16394001,16392440,16386231,16385211,16355851	Gene ID= ENSG00000127527.13 TPM= 8.89 Transcript Type= NA
chr19	16382989	16472009	16382989	16472009	-	transcript2592.chr19.nic@EPS15L1	transcript2592.chr19.nic	protein_coding	16471913,16442178,16441892,16440862,16437770,16436937,16434365,16428702,16425083,16421319,16417948,16417552,16413773,16404588,16403733,16402321,16395344,16393951,16392304,16386171,16385129,16382989	16472009,16442219,16441981,16440909,16437865,16436999,16434490,16428761,16425316,16421476,16418104,16417637,16413845,16404749,16403930,16402485,16395467,16394001,16392440,16386231,16385211,16384275	Gene ID= ENSG00000127527.13 TPM= 2.53 Transcript Type= NA
chr19	16382998	16472009	16382998	16472009	-	transcript2593.chr19.nnic@EPS15L1	transcript2593.chr19.nnic	protein_coding	16471913,16442178,16441892,16440862,16437770,16436937,16434365,16428702,16425083,16421319,16417948,16417552,16413773,16404588,16403733,16402321,16395344,16393951,16392304,16386171,16385129,16382998	16472009,16442219,16441981,16440909,16437865,16436999,16434490,16428761,16425316,16421476,16418104,16417637,16413845,16404749,16403930,16402485,16395467,16394001,16392440,16386231,16385211,16383134	Gene ID= ENSG00000127527.13 TPM= 2.53 Transcript Type= NA
chr19	16361597	16471976	16361597	16471976	-	ENST00000535753.6@EPS15L1	ENST00000535753.6	protein_coding	16471913,16442178,16441892,16440862,16437770,16436937,16434365,16428702,16425083,16421319,16417948,16417552,16413773,16404588,16403733,16402321,16395344,16393951,16392304,16386171,16385129,16361597	16471976,16442219,16441981,16440909,16437865,16436999,16434490,16428761,16425316,16421476,16418104,16417637,16413845,16404749,16403930,16402485,16395467,16394001,16392440,16386231,16385211,16361984	Gene ID= ENSG00000127527.13 TPM= 6.78 Transcript Type= protein_coding
chr19	16400631	16471950	16400631	16471950	-	ENST00000597937.5@EPS15L1	ENST00000597937.5	protein_coding	16471913,16442178,16441892,16440862,16437770,16436937,16434365,16428702,16425083,16421319,16417948,16417552,16413773,16404588,16403733,16400631	16471950,16442219,16441981,16440909,16437865,16436999,16434490,16428761,16425316,16421476,16418104,16417637,16413845,16404749,16403930,16402485	Gene ID= ENSG00000127527.13 TPM= 1.06 Transcript Type= protein_coding
chr19	16440653	16471943	16440653	16471943	-	ENST00000602151.1@EPS15L1	ENST00000602151.1	protein_coding	16471913,16442178,16441892,16440653	16471943,16442219,16441981,16440909	Gene ID= ENSG00000127527.13 TPM= 1.06 Transcript Type= protein_coding
chr19	16356329	16358327	16356329	16358327	-	ENST00000623994.1@AC020917.4	ENST00000623994.1	TEC	16356329	16358327	Gene ID= ENSG00000280332.1 TPM= 3.19 Transcript Type= TEC
chr19	16359244	16362388	16359244	16362388	+	transcript2616.chr19.nnic@NA	transcript2616.chr19.nnic	NA	16359244	16362388	Gene ID= novel_gene_chr19_2617 TPM= 6.37 Transcript Type= NA
chr19	16447888	16450096	16447888	16450096	+	transcript2620.chr19.nnic@NA	transcript2620.chr19.nnic	NA	16447888	16450096	Gene ID= novel_gene_chr19_2621 TPM= 2.12 Transcript Type= NA
chr19	16496311	16521350	16496311	16521350	+	ENST00000221671.7@C19orf44	ENST00000221671.7	protein_coding	16496311,16500792,16503065,16506701,16509499,16513014,16514497,16517230,16520094	16496465,16501551,16503380,16506774,16509988,16513109,16514663,16517341,16521350	Gene ID= ENSG00000105072.8 TPM= 3.19 Transcript Type= protein_coding
chr19	16517889	16542530	16517889	16542530	-	ENST00000546361.6@CHERP	ENST00000546361.6	protein_coding	16542354,16541870,16535452,16533011,16532598,16530769,16530585,16529648,16528080,16525242,16523052,16521521,16520826,16520364,16520149,16519621,16517889	16542530,16542043,16535636,16533148,16532749,16530880,16530674,16529900,16528255,16525677,16523290,16521654,16520912,16520507,16520265,16519715,16519352	Gene ID= ENSG00000085872.14 TPM= 41.96 Transcript Type= protein_coding
chr19	16531984	16542447	16531984	16542447	-	transcript2610.chr19.nic@CHERP	transcript2610.chr19.nic	protein_coding	16542354,16541870,16535452,16533011,16531984	16542447,16542043,16535636,16533148,16532749	Gene ID= ENSG00000085872.14 TPM= 2.66 Transcript Type= NA
chr19	16572624	16575340	16572624	16575340	+	ENST00000623966.1@AC008764.8	ENST00000623966.1	antisense_RNA	16572624	16575340	Gene ID= ENSG00000279529.1 TPM= 1.41 Transcript Type= antisense_RNA
chr19	16574919	16628206	16574919	16628206	-	ENST00000263390.7@MED26	ENST00000263390.7	protein_coding	16627872,16578335,16574919	16628206,16578409,16577682	Gene ID= ENSG00000105085.10 TPM= 11.5 Transcript Type= protein_coding
chr19	16574907	16578777	16574907	16578777	-	ENST00000597244.1@MED26	ENST00000597244.1	protein_coding	16574907	16578777	Gene ID= ENSG00000105085.10 TPM= 10.44 Transcript Type= retained_intron
chr19	16646364	16660442	16646364	16660442	-	ENST00000599310.5@SMIM7	ENST00000599310.5	protein_coding	16660085,16659959,16659395,16654035,16647120,16646364	16660442,16660000,16659447,16654125,16647261,16646800	Gene ID= ENSG00000214046.8 TPM= 2.12 Transcript Type= nonsense_mediated_decay
chr19	16630751	16660157	16630751	16660157	-	transcript2637.chr19.nic@SMIM7	transcript2637.chr19.nic	protein_coding	16660085,16659959,16659395,16647120,16630751	16660157,16660000,16659447,16647261,16631724	Gene ID= ENSG00000214046.8 TPM= 6.9 Transcript Type= NA
chr19	16644745	16660157	16644745	16660157	-	ENST00000487416.6@SMIM7	ENST00000487416.6	protein_coding	16660085,16659959,16659395,16654035,16644745	16660157,16660000,16659447,16654125,16647261	Gene ID= ENSG00000214046.8 TPM= 7.44 Transcript Type= protein_coding
chr19	16630751	16660130	16630751	16660130	-	ENST00000465250.6@SMIM7	ENST00000465250.6	protein_coding	16660085,16659959,16659395,16647096,16630751	16660130,16660000,16659447,16647261,16631724	Gene ID= ENSG00000214046.8 TPM= 11.15 Transcript Type= nonsense_mediated_decay
chr19	16646342	16660144	16646342	16660144	-	ENST00000597711.5@SMIM7	ENST00000597711.5	protein_coding	16660085,16659959,16659395,16646342	16660144,16660000,16659447,16647261	Gene ID= ENSG00000214046.8 TPM= 1.06 Transcript Type= protein_coding
chr19	16646588	16660144	16646588	16660144	-	ENST00000602194.5@SMIM7	ENST00000602194.5	protein_coding	16660085,16659959,16659395,16647096,16646588	16660144,16660000,16659447,16647261,16646800	Gene ID= ENSG00000214046.8 TPM= 6.37 Transcript Type= nonsense_mediated_decay
chr19	16656432	16659302	16656432	16659302	+	transcript2653.chr19.nnic@NA	transcript2653.chr19.nnic	NA	16656432	16659302	Gene ID= novel_gene_chr19_2654 TPM= 16.99 Transcript Type= NA
chr19	16661168	16695673	16661168	16695673	+	transcript2624.chr19.nnic@TMEM38A	transcript2624.chr19.nnic	protein_coding	16661168,16679984,16680397,16682421,16686288,16688144,16695659	16661341,16680140,16680581,16682508,16686405,16688993,16695673	Gene ID= ENSG00000072954.6 TPM= 2.12 Transcript Type= NA
chr19	16661127	16690029	16661127	16690029	+	ENST00000187762.6@TMEM38A	ENST00000187762.6	protein_coding	16661127,16679984,16680397,16682421,16686288,16688144	16661341,16680140,16680581,16682508,16686405,16690029	Gene ID= ENSG00000072954.6 TPM= 11.68 Transcript Type= protein_coding
chr19	16829388	16851532	16829388	16851532	+	transcript2660.chr19.nic@SIN3B	transcript2660.chr19.nic	protein_coding	16829388,16829791,16831494,16841768,16846970,16851412	16829540,16829897,16831647,16841968,16847113,16851532	Gene ID= ENSG00000127511.9 TPM= 2.12 Transcript Type= NA
chr19	16829400	16880350	16829400	16880350	+	ENST00000248054.9@SIN3B	ENST00000248054.9	protein_coding	16829400,16829791,16831494,16841768,16846970,16851412,16853069,16854143,16862352,16863680,16865410,16866373,16869460,16871229,16876055,16876486,16877545,16878183,16878497	16829540,16829897,16831647,16841968,16847113,16851534,16853158,16854261,16862559,16863796,16865648,16866556,16870075,16871398,16876228,16876578,16877639,16878390,16880350	Gene ID= ENSG00000127511.9 TPM= 16.99 Transcript Type= protein_coding
chr19	16888860	16892606	16888860	16892606	+	ENST00000248076.3@F2RL3	ENST00000248076.3	protein_coding	16888860,16889573	16889298,16892606	Gene ID= ENSG00000127533.3 TPM= 1.06 Transcript Type= protein_coding
chr19	17049761	17075625	17049761	17075625	-	ENST00000448593.6@HAUS8	ENST00000448593.6	protein_coding	17075394,17073274,17069031,17062698,17059997,17059557,17058811,17058549,17055861,17052825,17049761	17075625,17073335,17069086,17062779,17060089,17059651,17058876,17058707,17056002,17052966,17050176	Gene ID= ENSG00000131351.14 TPM= 2.12 Transcript Type= protein_coding
chr19	17049729	17075613	17049729	17075613	-	ENST00000253669.9@HAUS8	ENST00000253669.9	protein_coding	17075394,17073274,17069031,17062698,17059997,17059557,17058811,17058549,17055861,17052825,17049729	17075613,17073335,17069086,17062779,17060092,17059651,17058876,17058707,17056002,17052966,17050176	Gene ID= ENSG00000131351.14 TPM= 2.12 Transcript Type= protein_coding
chr19	17075740	17104071	17075740	17104071	+	transcript2673.chr19.nic@MYO9B	transcript2673.chr19.nic	protein_coding	17075740,17101660,17103257	17075874,17102557,17104071	Gene ID= ENSG00000099331.13 TPM= 2.12 Transcript Type= NA
chr19	17075740	17103070	17075740	17103070	+	transcript2675.chr19.nic@MYO9B	transcript2675.chr19.nic	protein_coding	17075740,17101660	17075874,17103070	Gene ID= ENSG00000099331.13 TPM= 3.19 Transcript Type= NA
chr19	17075786	17213284	17075786	17213284	+	ENST00000594824.5@MYO9B	ENST00000594824.5	protein_coding	17075786,17101660,17145397,17152644,17153967,17154315,17156909,17159395,17162350,17162988,17167943,17172336,17172759,17175663,17180927,17183829,17184865,17185921,17187935,17191097,17192746,17194556,17197792,17198184,17200293,17200639,17201926,17202130,17202842,17203147,17205263,17205960,17206248,17206679,17207113,17209586,17210333,17210715,17211651,17211895	17075874,17102557,17145491,17152706,17154066,17154415,17157038,17159484,17162466,17163122,17168064,17172477,17172963,17175741,17181040,17183868,17184987,17186001,17188045,17191219,17193062,17195473,17197858,17198308,17200426,17200829,17202024,17202303,17202883,17203258,17205336,17206152,17206376,17206784,17207244,17209709,17210380,17210852,17211774,17213284	Gene ID= ENSG00000099331.13 TPM= 10.62 Transcript Type= protein_coding
chr19	17215359	17219829	17215359	17219829	+	ENST00000263897.9@USE1	ENST00000263897.9	protein_coding	17215359,17215802,17215992,17216169,17217453,17218364,17219213,17219631	17215507,17215851,17216070,17216321,17217462,17218391,17219387,17219829	Gene ID= ENSG00000053501.12 TPM= 62.49 Transcript Type= protein_coding
chr19	17215390	17219829	17215390	17219829	+	ENST00000596136.5@USE1	ENST00000596136.5	protein_coding	17215390,17215802,17215992,17216169,17217453,17218364,17219631	17215507,17215851,17216070,17216321,17217462,17218391,17219829	Gene ID= ENSG00000053501.12 TPM= 2.47 Transcript Type= protein_coding
chr19	17215398	17219829	17215398	17219829	+	ENST00000445667.6@USE1	ENST00000445667.6	protein_coding	17215398,17215802,17215992,17216169,17218364,17219213,17219631	17215507,17215851,17216070,17216322,17218391,17219387,17219829	Gene ID= ENSG00000053501.12 TPM= 4.07 Transcript Type= protein_coding
chr19	17226204	17229219	17226204	17229219	+	ENST00000215061.8@OCEL1	ENST00000215061.8	protein_coding	17226204,17226693,17226994,17227840,17228256,17228803	17226316,17226869,17227199,17228005,17228309,17229219	Gene ID= ENSG00000099330.8 TPM= 8.5 Transcript Type= protein_coding
chr19	17226883	17229215	17226883	17229215	+	transcript2697.chr19.nic@OCEL1	transcript2697.chr19.nic	protein_coding	17226883,17228256,17228803	17227199,17228309,17229215	Gene ID= ENSG00000099330.8 TPM= 2.12 Transcript Type= NA
chr19	17226253	17229219	17226253	17229219	+	ENST00000600232.5@OCEL1	ENST00000600232.5	protein_coding	17226253,17226693,17226994,17227840,17228256,17229009	17226316,17226869,17227199,17228005,17228309,17229219	Gene ID= ENSG00000099330.8 TPM= 4.25 Transcript Type= protein_coding
chr19	17231883	17245940	17231883	17245940	-	ENST00000291442.3@NR2F6	ENST00000291442.3	protein_coding	17244943,17240671,17235499,17231883	17245940,17240765,17236065,17232626	Gene ID= ENSG00000160113.5 TPM= 316.52 Transcript Type= protein_coding
chr19	17249176	17264796	17249176	17264796	-	ENST00000252597.7@USHBP1	ENST00000252597.7	protein_coding	17264671,17264246,17264002,17262552,17259897,17259596,17259289,17258212,17256471,17255385,17251911,17251582,17249176	17264796,17264347,17264150,17262990,17260022,17259732,17259429,17258385,17256720,17255606,17252017,17251704,17250414	Gene ID= ENSG00000130307.11 TPM= 2.12 Transcript Type= protein_coding
chr19	17250154	17264724	17250154	17264724	-	ENST00000431146.6@USHBP1	ENST00000431146.6	protein_coding	17264671,17264246,17262552,17259897,17259596,17259289,17258212,17256471,17255385,17251911,17251582,17250154	17264724,17264347,17262990,17260022,17259732,17259429,17258385,17256720,17255606,17252017,17251704,17250414	Gene ID= ENSG00000130307.11 TPM= 3.19 Transcript Type= protein_coding
chr19	17267350	17279337	17267350	17279337	+	ENST00000598188.5@BABAM1	ENST00000598188.5	protein_coding	17267350,17268794,17271597,17273904,17274107,17275801,17276495,17276823,17278845	17267527,17269091,17271655,17274024,17274185,17275825,17276624,17276909,17279337	Gene ID= ENSG00000105393.15 TPM= 85.32 Transcript Type= protein_coding
chr19	17267386	17279337	17267386	17279337	+	ENST00000359435.8@BABAM1	ENST00000359435.8	protein_coding	17267386,17268756,17271597,17273904,17274107,17275801,17276495,17276823,17278845	17267527,17269091,17271655,17274024,17274185,17275825,17276624,17276909,17279337	Gene ID= ENSG00000105393.15 TPM= 16.28 Transcript Type= protein_coding
chr19	17292131	17303473	17292131	17303473	-	ENST00000247706.3@ABHD8	ENST00000247706.3	protein_coding	17303242,17300856,17294675,17294288,17292131	17303473,17301624,17294845,17294504,17292831	Gene ID= ENSG00000127220.5 TPM= 30.8 Transcript Type= protein_coding
chr19	17305668	17306843	17305668	17306843	+	ENST00000252602.1@MRPL34	ENST00000252602.1	protein_coding	17305668,17306166	17305957,17306843	Gene ID= ENSG00000130312.6 TPM= 156.14 Transcript Type= protein_coding
chr19	17309531	17323301	17309531	17323301	+	ENST00000359866.8@DDA1	ENST00000359866.8	protein_coding	17309531,17314023,17314338,17315934,17319546	17309657,17314103,17314389,17315995,17323301	Gene ID= ENSG00000130311.10 TPM= 21.24 Transcript Type= protein_coding
chr19	17337555	17342723	17337555	17342723	+	ENST00000600625.5@GTPBP3	ENST00000600625.5	protein_coding	17337555,17338008,17338365,17338539,17338954,17339123,17339434,17341107,17341478	17337664,17338255,17338451,17338741,17339026,17339266,17339599,17341322,17342723	Gene ID= ENSG00000130299.16 TPM= 2.66 Transcript Type= protein_coding
chr19	17337544	17342735	17337544	17342735	+	ENST00000324894.12@GTPBP3	ENST00000324894.12	protein_coding	17337544,17338008,17338365,17338539,17338954,17339123,17339434,17341044,17341478	17337664,17338255,17338451,17338741,17339026,17339266,17339599,17341322,17342735	Gene ID= ENSG00000130299.16 TPM= 11.15 Transcript Type= protein_coding
chr19	17339914	17341240	17339914	17341240	-	transcript2743.chr19.nnic@NA	transcript2743.chr19.nnic	NA	17339914	17341240	Gene ID= novel_gene_chr19_2744 TPM= 3.19 Transcript Type= NA
chr19	17351448	17377350	17351448	17377350	-	ENST00000252590.8@PLVAP	ENST00000252590.8	protein_coding	17376920,17366099,17365286,17360772,17360528,17351448	17377350,17366195,17365998,17360832,17360609,17352368	Gene ID= ENSG00000130300.8 TPM= 59.48 Transcript Type= protein_coding
chr19	17402939	17405648	17402939	17405648	-	ENST00000252593.6@BST2	ENST00000252593.6	protein_coding	17405291,17404371,17404129,17403680,17402939	17405648,17404437,17404189,17403824,17403326	Gene ID= ENSG00000130303.12 TPM= 28.68 Transcript Type= protein_coding
chr19	17468791	17506168	17468791	17506168	+	transcript2755.chr19.nic@SLC27A1	transcript2755.chr19.nic	protein_coding	17468791,17470540,17486563,17487174,17487460,17488848,17489008,17497255,17500278,17500495,17500712,17501273,17504455	17469010,17470707,17486957,17487335,17487529,17488939,17489117,17497464,17500404,17500632,17500876,17501419,17506168	Gene ID= ENSG00000130304.16 TPM= 22.31 Transcript Type= NA
chr19	17470444	17506168	17470444	17506168	+	ENST00000252595.11@SLC27A1	ENST00000252595.11	protein_coding	17470444,17486563,17487174,17487460,17488848,17489008,17497255,17500278,17500495,17500712,17501273,17504455	17470707,17486957,17487335,17487529,17488939,17489117,17497464,17500404,17500632,17500876,17501419,17506168	Gene ID= ENSG00000130304.16 TPM= 19.12 Transcript Type= protein_coding
chr19	17477242	17478291	17477242	17478291	-	transcript2771.chr19.nnic@NA	transcript2771.chr19.nnic	NA	17477242	17478291	Gene ID= novel_gene_chr19_2772 TPM= 3.19 Transcript Type= NA
chr19	17511644	17513244	17511644	17513244	+	ENST00000596799.1@PGLS	ENST00000596799.1	protein_coding	17511644	17513244	Gene ID= ENSG00000130313.6 TPM= 1.06 Transcript Type= retained_intron
chr19	17511629	17521288	17511629	17521288	+	ENST00000252603.6@PGLS	ENST00000252603.6	protein_coding	17511629,17516173,17517288,17517710,17520944	17511960,17516280,17517389,17517850,17521288	Gene ID= ENSG00000130313.6 TPM= 23.37 Transcript Type= protein_coding
chr19	17520782	17521868	17520782	17521868	+	transcript2769.chr19.nnic@NA	transcript2769.chr19.nnic	NA	17520782	17521868	Gene ID= novel_gene_chr19_2770 TPM= 2.12 Transcript Type= NA
chr19	17555594	17583159	17555594	17583159	+	ENST00000252599.8@COLGALT1	ENST00000252599.8	protein_coding	17555594,17559311,17560348,17567406,17568509,17572483,17577195,17577361,17577957,17579482,17580699,17581177	17555973,17559421,17560465,17567540,17568713,17572602,17577271,17577467,17578089,17579609,17580905,17583159	Gene ID= ENSG00000130309.10 TPM= 43.02 Transcript Type= protein_coding
chr19	17579951	17583162	17579951	17583162	+	ENST00000593832.1@COLGALT1	ENST00000593832.1	protein_coding	17579951,17581177	17580905,17583162	Gene ID= ENSG00000130309.10 TPM= 16.46 Transcript Type= retained_intron
chr19	17719352	17734516	17719352	17734516	+	ENST00000324096.8@MAP1S	ENST00000324096.8	protein_coding	17719352,17720936,17724126,17725049,17725829,17733193,17734273	17719620,17721037,17724208,17725189,17728172,17733428,17734516	Gene ID= ENSG00000130479.10 TPM= 60.54 Transcript Type= protein_coding
chr19	17824786	17848032	17824786	17848032	-	ENST00000458235.5@JAK3	ENST00000458235.5	protein_coding	17847946,17844234,17843777,17843380,17843027,17842316,17841640,17841389,17840230,17839477,17838263,17837932,17837129,17835924,17835083,17834852,17834571,17832790,17832519,17831674,17831228,17830503,17830108,17824786	17848032,17844430,17843900,17843491,17843172,17842610,17841762,17841546,17840341,17839663,17838390,17838063,17837213,17836051,17835215,17835003,17834721,17832929,17832708,17831798,17831400,17830620,17830218,17826910	Gene ID= ENSG00000105639.18 TPM= 11.68 Transcript Type= protein_coding
chr19	17859876	17863316	17859876	17863316	+	ENST00000222247.9@RPL18A	ENST00000222247.9	protein_coding	17859876,17861293,17862094,17862918,17863171	17859974,17861472,17862223,17863027,17863316	Gene ID= ENSG00000105640.12 TPM= 441.86 Transcript Type= protein_coding
chr19	17935096	17943991	17935096	17943991	+	ENST00000597436.5@CCDC124	ENST00000597436.5	protein_coding	17935096,17936410,17942656,17943261,17943508	17935191,17936579,17942845,17943375,17943991	Gene ID= ENSG00000007080.10 TPM= 34.52 Transcript Type= protein_coding
chr19	17933016	17943937	17933016	17943937	+	ENST00000445755.6@CCDC124	ENST00000445755.6	protein_coding	17933016,17936410,17942656,17943261,17943508	17933048,17936579,17942845,17943375,17943937	Gene ID= ENSG00000007080.10 TPM= 84.44 Transcript Type= protein_coding
chr19	17933023	17936992	17933023	17936992	+	ENST00000602080.1@CCDC124	ENST00000602080.1	protein_coding	17933023,17936410	17933048,17936992	Gene ID= ENSG00000007080.10 TPM= 1.06 Transcript Type= retained_intron
chr19	18001132	18014102	18001132	18014102	+	ENST00000379656.7@ARRDC2	ENST00000379656.7	protein_coding	18001132,18008711,18008971,18009592,18009783,18010196,18010572,18012913	18001573,18008777,18009118,18009694,18010039,18010358,18010729,18014102	Gene ID= ENSG00000105643.9 TPM= 12.21 Transcript Type= protein_coding
chr19	18008168	18014102	18008168	18014102	+	ENST00000222250.4@ARRDC2	ENST00000222250.4	protein_coding	18008168,18008711,18008971,18009592,18009783,18010196,18010572,18012913	18008584,18008777,18009118,18009694,18010039,18010358,18010729,18014102	Gene ID= ENSG00000105643.9 TPM= 7.97 Transcript Type= protein_coding
chr19	18153118	18170540	18153118	18170540	+	ENST00000222254.12@PIK3R2	ENST00000222254.12	protein_coding	18153118,18155457,18160471,18160919,18161054,18161279,18161966,18162202,18162408,18162967,18163263,18166160,18167130,18168475,18168726,18169087	18153294,18156201,18160563,18160969,18161185,18161495,18162051,18162310,18162506,18163147,18163388,18166302,18167306,18168546,18168896,18170540	Gene ID= ENSG00000105647.16 TPM= 36.11 Transcript Type= protein_coding
chr19	18159146	18160490	18159146	18160490	-	transcript2800.chr19.nnic@NA	transcript2800.chr19.nnic	NA	18159146	18160490	Gene ID= novel_gene_chr19_2801 TPM= 5.31 Transcript Type= NA
chr19	18193182	18196742	18193182	18196742	+	ENST00000599612.2@MPV17L2	ENST00000599612.2	protein_coding	18193182,18193864,18194777,18194958,18195999	18193468,18194034,18194853,18195086,18196742	Gene ID= ENSG00000254858.9 TPM= 60.54 Transcript Type= protein_coding
chr19	18196784	18204074	18196784	18204074	-	ENST00000222256.8@RAB3A	ENST00000222256.8	protein_coding	18203896,18202513,18200327,18198725,18196784	18204074,18202740,18200445,18198849,18197660	Gene ID= ENSG00000105649.9 TPM= 11.15 Transcript Type= protein_coding
chr19	18196799	18204042	18196799	18204042	-	ENST00000464076.3@RAB3A	ENST00000464076.3	protein_coding	18203896,18200327,18198725,18196799	18204042,18200445,18198849,18197660	Gene ID= ENSG00000105649.9 TPM= 2.66 Transcript Type= protein_coding
chr19	18204741	18205563	18204741	18205563	+	ENST00000596473.1@AC005759.1	ENST00000596473.1	antisense_RNA	18204741,18205456	18204899,18205563	Gene ID= ENSG00000268650.3 TPM= 1.06 Transcript Type= antisense_RNA
chr19	18279760	18281622	18279760	18281622	-	ENST00000252818.4@JUND	ENST00000252818.4	protein_coding	18279760	18281622	Gene ID= ENSG00000130522.5 TPM= 659.6 Transcript Type= protein_coding
chr19	18306230	18323274	18306230	18323274	-	ENST00000593829.5@LSM4	ENST00000593829.5	protein_coding	18323018,18316024,18312604,18309678,18306230	18323274,18316065,18312702,18309861,18307555	Gene ID= ENSG00000130520.10 TPM= 150.83 Transcript Type= protein_coding
chr19	18306907	18323071	18306907	18323071	-	ENST00000252816.10@LSM4	ENST00000252816.10	protein_coding	18323018,18312604,18309678,18306907	18323071,18312702,18309861,18307555	Gene ID= ENSG00000130520.10 TPM= 4.25 Transcript Type= protein_coding
chr19	18340557	18361858	18340557	18361858	+	transcript2822.chr19.nnic@PGPEP1	transcript2822.chr19.nnic	protein_coding	18340557,18342859,18355895,18357383,18358006,18361690	18340715,18342911,18356011,18357615,18358070,18361858	Gene ID= ENSG00000130517.13 TPM= 2.12 Transcript Type= NA
chr19	18340557	18369948	18340557	18369948	+	transcript2823.chr19.nic@PGPEP1	transcript2823.chr19.nic	protein_coding	18340557,18342859,18355895,18357383,18358006,18369706	18340715,18342911,18356011,18357615,18358070,18369948	Gene ID= ENSG00000130517.13 TPM= 4.25 Transcript Type= NA
chr19	18340557	18369930	18340557	18369930	+	transcript2826.chr19.nic@PGPEP1	transcript2826.chr19.nic	protein_coding	18340557,18342859,18355895,18357383,18369706	18340715,18342911,18356011,18357615,18369930	Gene ID= ENSG00000130517.13 TPM= 3.19 Transcript Type= NA
chr19	18340598	18363678	18340598	18363678	+	ENST00000604499.6@PGPEP1	ENST00000604499.6	protein_coding	18340598,18342859,18355895,18357383,18363431	18340715,18342911,18356011,18357615,18363678	Gene ID= ENSG00000130517.13 TPM= 3.19 Transcript Type= protein_coding
chr19	18364964	18366338	18364964	18366338	+	transcript2829.chr19.nnic@NA	transcript2829.chr19.nnic	NA	18364964	18366338	Gene ID= novel_gene_chr19_2830 TPM= 2.12 Transcript Type= NA
chr19	18367078	18367981	18367078	18367981	+	transcript2827.chr19.nnic@NA	transcript2827.chr19.nnic	NA	18367078	18367981	Gene ID= novel_gene_chr19_2828 TPM= 3.19 Transcript Type= NA
chr19	18386158	18389176	18386158	18389176	+	ENST00000252809.3@GDF15	ENST00000252809.3	protein_coding	18386158,18388286	18386466,18389176	Gene ID= ENSG00000130513.6 TPM= 4.25 Transcript Type= protein_coding
chr19	18391149	18397611	18391149	18397611	-	ENST00000595840.1@LRRC25	ENST00000595840.1	protein_coding	18397453,18396185,18391149	18397611,18396972,18392125	Gene ID= ENSG00000175489.9 TPM= 1.06 Transcript Type= protein_coding
chr19	18419269	18434562	18419269	18434562	+	transcript2848.chr19.nic@SSBP4	transcript2848.chr19.nic	protein_coding	18419269,18427351,18427752,18427898,18430841,18431647,18431793,18432000,18432147,18432559,18432700,18432829,18432973,18433135,18433585,18433710,18434217	18419707,18427423,18427813,18427982,18430930,18431706,18431862,18432070,18432214,18432604,18432735,18432883,18433043,18433213,18433613,18433932,18434562	Gene ID= ENSG00000130511.15 TPM= 37.18 Transcript Type= NA
chr19	18419385	18434562	18419385	18434562	+	transcript2852.chr19.nic@SSBP4	transcript2852.chr19.nic	protein_coding	18419385,18427351,18427752,18427898,18430841,18431647,18431793,18432000,18432147,18432559,18432700,18432829,18432973,18433135,18433585,18433710	18419707,18427423,18427813,18427982,18430930,18431706,18431862,18432070,18432214,18432604,18432735,18432883,18433043,18433213,18433613,18434562	Gene ID= ENSG00000130511.15 TPM= 11.68 Transcript Type= NA
chr19	18419336	18434562	18419336	18434562	+	ENST00000348495.10@SSBP4	ENST00000348495.10	protein_coding	18419336,18427351,18427752,18427898,18430841,18431647,18431793,18432000,18432147,18432559,18432700,18432829,18432973,18433135,18433585,18433710,18434217	18419707,18427423,18427813,18427982,18430930,18431706,18431862,18432070,18432214,18432604,18432735,18432883,18433043,18433213,18433613,18433817,18434562	Gene ID= ENSG00000130511.15 TPM= 35.05 Transcript Type= protein_coding
chr19	18419355	18434562	18419355	18434562	+	ENST00000270061.11@SSBP4	ENST00000270061.11	protein_coding	18419355,18427351,18427752,18427898,18430841,18431353,18431647,18431793,18432000,18432147,18432559,18432700,18432829,18432973,18433135,18433585,18433710,18434217	18419707,18427423,18427813,18427982,18430930,18431418,18431706,18431862,18432070,18432214,18432604,18432735,18432883,18433043,18433213,18433613,18433817,18434562	Gene ID= ENSG00000130511.15 TPM= 7.44 Transcript Type= protein_coding
chr19	18434821	18438767	18434821	18438767	-	transcript2861.chr19.nic@ISYNA1	transcript2861.chr19.nic	protein_coding	18438093,18437860,18437599,18436684,18436330,18436032,18435757,18435563,18435266,18434821	18438767,18437988,18437760,18437105,18436479,18436247,18435921,18435676,18435483,18435117	Gene ID= ENSG00000105655.18 TPM= 3.9 Transcript Type= NA
chr19	18434821	18437250	18434821	18437250	-	transcript2865.chr19.nic@ISYNA1	transcript2865.chr19.nic	protein_coding	18436684,18436330,18436032,18435757,18435563,18435266,18434821	18437250,18436479,18436247,18435921,18435676,18435483,18435117	Gene ID= ENSG00000105655.18 TPM= 3.9 Transcript Type= NA
chr19	18434821	18437474	18434821	18437474	-	transcript2866.chr19.nic@ISYNA1	transcript2866.chr19.nic	protein_coding	18436330,18436032,18435757,18435563,18435266,18434821	18437474,18436247,18435921,18435676,18435483,18435117	Gene ID= ENSG00000105655.18 TPM= 2.84 Transcript Type= NA
chr19	18442663	18522127	18442663	18522127	-	ENST00000262809.8@ELL	ENST00000262809.8	protein_coding	18521921,18472835,18465797,18465412,18461578,18458205,18451552,18450477,18446748,18446309,18445224,18442663	18522127,18472882,18465918,18465575,18461852,18458329,18451648,18450975,18446814,18446480,18445268,18444868	Gene ID= ENSG00000105656.12 TPM= 12.75 Transcript Type= protein_coding
chr19	18531762	18543660	18531762	18543660	-	ENST00000608443.5@FKBP8	ENST00000608443.5	protein_coding	18543486,18541679,18539551,18539371,18538216,18537601,18533270,18532664,18531762	18543660,18541995,18539720,18539459,18538436,18537773,18533347,18532795,18532255	Gene ID= ENSG00000105701.15 TPM= 261.79 Transcript Type= protein_coding
chr19	18531762	18543524	18531762	18543524	-	ENST00000222308.8@FKBP8	ENST00000222308.8	protein_coding	18543486,18541679,18539551,18539371,18538216,18537601,18533270,18532664,18531762	18543524,18541995,18539720,18539459,18538433,18537773,18533347,18532795,18532255	Gene ID= ENSG00000105701.15 TPM= 20.85 Transcript Type= protein_coding
chr19	18531762	18542972	18531762	18542972	-	ENST00000596558.6@FKBP8	ENST00000596558.6	protein_coding	18542888,18541679,18539551,18539371,18538216,18537601,18533270,18532664,18531762	18542972,18541995,18539720,18539459,18538433,18537773,18533347,18532795,18532255	Gene ID= ENSG00000105701.15 TPM= 16.6 Transcript Type= protein_coding
chr19	18531752	18543573	18531752	18543573	-	ENST00000544835.7@FKBP8	ENST00000544835.7	protein_coding	18543486,18541679,18537601,18533270,18532664,18531752	18543573,18541995,18537773,18533347,18532795,18532255	Gene ID= ENSG00000105701.15 TPM= 5.66 Transcript Type= protein_coding
chr19	18557788	18569378	18557788	18569378	+	ENST00000222307.8@KXD1	ENST00000222307.8	protein_coding	18557788,18562036,18564869,18567132,18568402	18557914,18562157,18565021,18567178,18569378	Gene ID= ENSG00000105700.10 TPM= 87.1 Transcript Type= protein_coding
chr19	18571875	18575242	18571875	18575242	+	ENST00000595683.5@UBA52	ENST00000595683.5	protein_coding	18571875,18572351,18573293,18573662,18574870,18575057	18571909,18572607,18573403,18573748,18574972,18575242	Gene ID= ENSG00000221983.7 TPM= 4.96 Transcript Type= protein_coding
chr19	18571858	18575241	18571858	18575241	+	transcript2917.chr19.nic@UBA52	transcript2917.chr19.nic	protein_coding	18571858,18573293,18573662,18574870,18575057	18572607,18573403,18573748,18574972,18575241	Gene ID= ENSG00000221983.7 TPM= 9.74 Transcript Type= NA
chr19	18571730	18575202	18571730	18575202	+	ENST00000596304.5@UBA52	ENST00000596304.5	protein_coding	18571730,18573293,18573662,18574870,18575057	18571836,18573403,18573748,18574972,18575202	Gene ID= ENSG00000221983.7 TPM= 2.12 Transcript Type= protein_coding
chr19	18571802	18575241	18571802	18575241	+	ENST00000430157.6@UBA52	ENST00000430157.6	protein_coding	18571802,18573293,18573662,18574870,18575057	18571887,18573403,18573748,18574972,18575241	Gene ID= ENSG00000221983.7 TPM= 121.27 Transcript Type= protein_coding
chr19	18589872	18592336	18589872	18592336	+	ENST00000595077.1@C19orf60	ENST00000595077.1	protein_coding	18589872	18592336	Gene ID= ENSG00000006015.17 TPM= 7.44 Transcript Type= retained_intron
chr19	18588725	18592336	18588725	18592336	+	ENST00000358607.10@C19orf60	ENST00000358607.10	protein_coding	18588725,18588995,18589413,18590854,18592108	18588900,18589077,18589683,18590933,18592336	Gene ID= ENSG00000006015.17 TPM= 70.1 Transcript Type= protein_coding
chr19	18588796	18592336	18588796	18592336	+	ENST00000450195.6@C19orf60	ENST00000450195.6	protein_coding	18588796,18588995,18589479,18590854,18592108	18588900,18589077,18589683,18590933,18592336	Gene ID= ENSG00000006015.17 TPM= 58.42 Transcript Type= protein_coding
chr19	18588809	18592327	18588809	18592327	+	ENST00000597371.1@C19orf60	ENST00000597371.1	protein_coding	18588809,18588995,18590854,18592108	18588900,18589683,18590933,18592327	Gene ID= ENSG00000006015.17 TPM= 8.5 Transcript Type= retained_intron
chr19	18589602	18592336	18589602	18592336	+	ENST00000595490.1@C19orf60	ENST00000595490.1	protein_coding	18589602,18590854,18592089	18589683,18590933,18592336	Gene ID= ENSG00000006015.17 TPM= 8.5 Transcript Type= protein_coding
chr19	18593237	18606850	18593237	18606850	-	ENST00000392386.7@CRLF1	ENST00000392386.7	protein_coding	18606542,18599565,18598772,18598432,18596892,18596622,18594247,18594065,18593237	18606850,18599846,18598901,18598601,18597049,18596790,18594434,18594107,18593579	Gene ID= ENSG00000006016.10 TPM= 22.31 Transcript Type= protein_coding
chr19	18593237	18606827	18593237	18606827	-	transcript2923.chr19.nnic@CRLF1	transcript2923.chr19.nnic	protein_coding	18606542,18599565,18598772,18598432,18596892,18596664,18594247,18594065,18593237	18606827,18599846,18598901,18598601,18597049,18596790,18594434,18594112,18593579	Gene ID= ENSG00000006016.10 TPM= 5.31 Transcript Type= NA
chr19	18636965	18671714	18636965	18671714	+	ENST00000300976.8@KLHL26	ENST00000300976.8	protein_coding	18636965,18664261,18667664	18637137,18664443,18671714	Gene ID= ENSG00000167487.11 TPM= 2.12 Transcript Type= protein_coding
chr19	18768585	18777952	18768585	18777952	+	transcript2933.chr19.nic@CRTC1	transcript2933.chr19.nic	protein_coding	18768585,18771442,18774900,18775641,18777171	18768793,18771546,18774986,18775821,18777952	Gene ID= ENSG00000105662.15 TPM= 6.37 Transcript Type= NA
chr19	18782773	18791314	18782773	18791314	-	ENST00000222271.6@COMP	ENST00000222271.6	protein_coding	18791191,18790850,18790562,18789942,18789160,18788839,18788592,18788410,18788212,18787491,18786532,18786239,18785965,18785673,18785498,18784896,18784191,18783054,18782773	18791314,18790935,18790613,18790114,18789297,18788913,18788750,18788514,18788319,18787650,18786650,18786291,18786146,18785851,18785546,18785092,18784363,18783193,18782961	Gene ID= ENSG00000105664.10 TPM= 73.82 Transcript Type= protein_coding
chr19	18782773	18791305	18782773	18791305	-	ENST00000542601.6@COMP	ENST00000542601.6	protein_coding	18790850,18790562,18789942,18789160,18788839,18788592,18788410,18788212,18787491,18786532,18786239,18785965,18785673,18785498,18784896,18784191,18783054,18782773	18791305,18790613,18790114,18789297,18788913,18788750,18788514,18788319,18787650,18786650,18786291,18786146,18785851,18785546,18785092,18784363,18783193,18782961	Gene ID= ENSG00000105664.10 TPM= 11.15 Transcript Type= protein_coding
chr19	18831938	18868236	18831938	18868236	+	ENST00000262803.9@UPF1	ENST00000262803.9	protein_coding	18831938,18845980,18847744,18850075,18850688,18852135,18852987,18853252,18854601,18854879,18855124,18855925,18856186,18856877,18857320,18860321,18860826,18862010,18863438,18864170,18865289,18865561,18866044,18866521	18832440,18846119,18847833,18850242,18850868,18852296,18853071,18853350,18854709,18855038,18855242,18856089,18856300,18857020,18857533,18860438,18860982,18862152,18863612,18864251,18865450,18865778,18866166,18868236	Gene ID= ENSG00000005007.12 TPM= 34.52 Transcript Type= protein_coding
chr19	18832001	18868229	18832001	18868229	+	ENST00000599848.5@UPF1	ENST00000599848.5	protein_coding	18832001,18845980,18847744,18850075,18850688,18852135,18852987,18853252,18854601,18854879,18855124,18855925,18856186,18856877,18857320,18860321,18860826,18862010,18863438,18864170,18865289,18865561,18866044,18866521	18832440,18846119,18847833,18850242,18850868,18852296,18853104,18853350,18854709,18855038,18855242,18856089,18856300,18857020,18857533,18860438,18860982,18862152,18863612,18864251,18865450,18865778,18866166,18868229	Gene ID= ENSG00000005007.12 TPM= 24.96 Transcript Type= protein_coding
chr19	18877909	18896135	18877909	18896135	-	ENST00000429504.6@CERS1	ENST00000429504.6	protein_coding	18895824,18893416,18884087,18880274,18879241,18877909	18896135,18893575,18884267,18880435,18879388,18879039	Gene ID= ENSG00000223802.7 TPM= 2.12 Transcript Type= protein_coding
chr19	18877917	18884233	18877917	18884233	-	ENST00000596048.1@CERS1	ENST00000596048.1	protein_coding	18884087,18880274,18879241,18878930,18877917	18884233,18880435,18879388,18879039,18878098	Gene ID= ENSG00000223802.7 TPM= 1.06 Transcript Type= protein_coding
chr19	18899514	18919397	18899514	18919397	-	ENST00000262812.8@COPE	ENST00000262812.8	protein_coding	18919223,18912984,18910971,18906960,18905576,18904771,18903268,18900381,18899873,18899514	18919397,18913046,18911071,18907112,18905629,18904852,18903423,18900449,18899947,18899726	Gene ID= ENSG00000105669.13 TPM= 332.99 Transcript Type= protein_coding
chr19	18899517	18919363	18899517	18919363	-	ENST00000349893.8@COPE	ENST00000349893.8	protein_coding	18919223,18912984,18910971,18906960,18905576,18904771,18900381,18899873,18899517	18919363,18913046,18911071,18907112,18905629,18904852,18900449,18899947,18899726	Gene ID= ENSG00000105669.13 TPM= 9.03 Transcript Type= protein_coding
chr19	18899563	18919380	18899563	18919380	-	ENST00000600932.5@COPE	ENST00000600932.5	protein_coding	18919223,18912984,18910971,18906960,18905867,18905576,18904771,18903268,18900381,18899873,18899563	18919380,18913046,18911071,18907112,18905935,18905629,18904852,18903423,18900449,18899947,18899726	Gene ID= ENSG00000105669.13 TPM= 2.12 Transcript Type= protein_coding
chr19	18919675	18928627	18919675	18928627	+	ENST00000247003.8@DDX49	ENST00000247003.8	protein_coding	18919675,18920580,18921663,18921843,18922326,18922604,18924233,18924623,18924882,18926303,18927766,18927965,18928128	18919856,18920703,18921748,18921964,18922513,18922744,18924308,18924699,18924979,18926377,18927854,18928036,18928627	Gene ID= ENSG00000105671.11 TPM= 30.8 Transcript Type= protein_coding
chr19	18919738	18928622	18919738	18928622	+	ENST00000602113.5@DDX49	ENST00000602113.5	protein_coding	18919738,18920651,18921663,18921843,18922326,18922604,18924233,18924623,18924882,18926303,18927766,18927965,18928128	18919856,18920703,18921748,18921964,18922513,18922744,18924308,18924699,18924979,18926377,18927854,18928036,18928622	Gene ID= ENSG00000105671.11 TPM= 5.31 Transcript Type= nonsense_mediated_decay
chr19	18929203	18941283	18929203	18941283	-	transcript2959.chr19.nic@HOMER3	transcript2959.chr19.nic	protein_coding	18941193,18938969,18938728,18938353,18934303,18932924,18931976,18931509,18931325,18929203	18941283,18939049,18938884,18938484,18934410,18933045,18932132,18931625,18931411,18929634	Gene ID= ENSG00000051128.18 TPM= 14.34 Transcript Type= NA
chr19	18929203	18941214	18929203	18941214	-	ENST00000392351.7@HOMER3	ENST00000392351.7	protein_coding	18941051,18938969,18938728,18938353,18934303,18932924,18931976,18931509,18931325,18929203	18941214,18939049,18938884,18938484,18934410,18933045,18932132,18931625,18931411,18929634	Gene ID= ENSG00000051128.18 TPM= 41.96 Transcript Type= protein_coding
chr19	18990888	19033539	18990888	19033539	-	transcript2961.chr19.nic@SUGP2	transcript2961.chr19.nic	protein_coding	19033437,19030951,19024619,19019109,19009855,19008317,19004168,19001613,18995144,18994366,18993638,18990888	19033539,19031082,19026226,19019229,19010342,19008428,19004646,19001674,18995280,18994486,18993740,18991149	Gene ID= ENSG00000064607.16 TPM= 4.41 Transcript Type= NA
chr19	18990893	19033559	18990893	19033559	-	ENST00000337018.10@SUGP2	ENST00000337018.10	protein_coding	19033437,19030951,19024619,19019109,19009855,19008317,19004168,19001613,18995144,18994366,18990893	19033559,19031082,19026226,19019229,19010342,19008428,19004646,19001674,18995280,18994486,18991149	Gene ID= ENSG00000064607.16 TPM= 60.17 Transcript Type= protein_coding
chr19	18990893	19033857	18990893	19033857	-	transcript2967.chr19.nic@SUGP2	transcript2967.chr19.nic	protein_coding	19033762,19030951,19024619,19019109,19009855,19008317,19004168,19001613,18995144,18994366,18990893	19033857,19031082,19026226,19019229,19010342,19008428,19004646,19001674,18995280,18994486,18991149	Gene ID= ENSG00000064607.16 TPM= 25.39 Transcript Type= NA
chr19	18990893	19033539	18990893	19033539	-	transcript2977.chr19.nic@SUGP2	transcript2977.chr19.nic	protein_coding	19033437,19030951,19024619,19019109,19009855,19008317,19004168,19001613,18994366,18990893	19033539,19031082,19026226,19019229,19010342,19008428,19004646,19001674,18995280,18991149	Gene ID= ENSG00000064607.16 TPM= 7.59 Transcript Type= NA
chr19	19033578	19058178	19033578	19058178	+	ENST00000535612.5@ARMC6	ENST00000535612.5	protein_coding	19033578,19034131,19042711,19043992,19051622,19054152,19055265,19055791,19057416	19033930,19034238,19042877,19044074,19052195,19054321,19055396,19055928,19058178	Gene ID= ENSG00000105676.13 TPM= 21.06 Transcript Type= protein_coding
chr19	19033575	19058178	19033575	19058178	+	ENST00000392335.6@ARMC6	ENST00000392335.6	protein_coding	19033575,19042711,19043992,19051622,19054152,19055265,19055791,19057416	19033930,19042877,19044074,19052195,19054321,19055396,19055928,19058178	Gene ID= ENSG00000105676.13 TPM= 63.55 Transcript Type= protein_coding
chr19	19033610	19058159	19033610	19058159	+	ENST00000269932.10@ARMC6	ENST00000269932.10	protein_coding	19033610,19042711,19043992,19051622,19054152,19055265,19055791,19057416	19034013,19042877,19044074,19052195,19054321,19055396,19055928,19058159	Gene ID= ENSG00000105676.13 TPM= 4.6 Transcript Type= protein_coding
chr19	19063997	19112888	19063997	19112888	+	transcript2981.chr19.nnic@SLC25A42	transcript2981.chr19.nnic	protein_coding	19063997,19086742,19096091,19101781,19104913,19105561,19106269,19107894,19110569	19064115,19086783,19096205,19101886,19104938,19105727,19106385,19108045,19112888	Gene ID= ENSG00000181035.13 TPM= 3.19 Transcript Type= NA
chr19	19063956	19105234	19063956	19105234	+	transcript2998.chr19.nic@SLC25A42	transcript2998.chr19.nic	protein_coding	19063956,19096091,19101781,19104913	19064115,19096205,19101886,19105234	Gene ID= ENSG00000181035.13 TPM= 2.12 Transcript Type= NA
chr19	19063999	19112888	19063999	19112888	+	ENST00000318596.7@SLC25A42	ENST00000318596.7	protein_coding	19063999,19096091,19101781,19104913,19105561,19106269,19107894,19110569	19064115,19096205,19101886,19104938,19105727,19106385,19108045,19112888	Gene ID= ENSG00000181035.13 TPM= 42.49 Transcript Type= protein_coding
chr19	19119615	19138493	19119615	19138493	-	ENST00000162044.13@TMEM161A	ENST00000162044.13	protein_coding	19138426,19134784,19133130,19132657,19132352,19130156,19121759,19121525,19121308,19120992,19120765,19119615	19138493,19134887,19133210,19132754,19132508,19130307,19121819,19121668,19121421,19121166,19120861,19120183	Gene ID= ENSG00000064545.14 TPM= 14.87 Transcript Type= protein_coding
chr19	19145572	19192158	19145572	19192158	-	ENST00000602804.5@BORCS8-MEF2B	ENST00000602804.5	protein_coding	19192081,19186893,19186034,19182573,19180686,19150682,19149226,19147698,19147036,19146742,19146555,19146273,19145572	19192158,19187005,19186098,19182683,19180761,19150764,19149429,19147832,19147183,19146875,19146648,19146384,19146022	Gene ID= ENSG00000064489.22 TPM= 2.12 Transcript Type= nonsense_mediated_decay
chr19	19176906	19192589	19176906	19192589	-	ENST00000462790.7@BORCS8	ENST00000462790.7	protein_coding	19192081,19186893,19186034,19182573,19180686,19176906	19192589,19187005,19186098,19182683,19180761,19177460	Gene ID= ENSG00000254901.7 TPM= 57.36 Transcript Type= protein_coding
chr19	19192834	19201866	19192834	19201866	+	transcript3011.chr19.nic@RFXANK	transcript3011.chr19.nic	protein_coding	19192834,19193939,19196966,19197186,19197521,19198107,19198657,19199154,19201649	19193100,19194133,19197046,19197251,19197621,19198232,19198723,19199234,19201866	Gene ID= ENSG00000064490.13 TPM= 17.71 Transcript Type= NA
chr19	19192230	19201869	19192230	19201869	+	ENST00000303088.8@RFXANK	ENST00000303088.8	protein_coding	19192230,19192960,19193939,19196963,19197186,19197521,19198107,19198657,19199154,19201649	19192554,19193100,19194133,19197046,19197251,19197621,19198232,19198723,19199234,19201869	Gene ID= ENSG00000064490.13 TPM= 19.83 Transcript Type= protein_coding
chr19	19192911	19201866	19192911	19201866	+	ENST00000392324.8@RFXANK	ENST00000392324.8	protein_coding	19192911,19193939,19196966,19197521,19198107,19198657,19199154,19201649	19193100,19194133,19197046,19197621,19198232,19198723,19199234,19201866	Gene ID= ENSG00000064490.13 TPM= 1.77 Transcript Type= protein_coding
chr19	19201416	19203424	19201416	19203424	-	ENST00000331552.11@NR2C2AP	ENST00000331552.11	protein_coding	19203023,19202791,19202470,19202331,19201416	19203424,19202881,19202575,19202398,19202041	Gene ID= ENSG00000184162.14 TPM= 9.56 Transcript Type= protein_coding
chr19	19201416	19203357	19201416	19203357	-	ENST00000420605.7@NR2C2AP	ENST00000420605.7	protein_coding	19203023,19202791,19202470,19202331,19201931,19201416	19203357,19202881,19202575,19202398,19202041,19201563	Gene ID= ENSG00000184162.14 TPM= 1.06 Transcript Type= protein_coding
chr19	19276511	19320844	19276511	19320844	-	ENST00000247001.9@SUGP1	ENST00000247001.9	protein_coding	19320463,19316422,19310097,19305849,19303724,19303348,19302265,19296989,19280185,19279213,19278690,19277734,19276947,19276511	19320844,19316593,19310200,19306076,19303847,19303448,19302388,19297344,19280291,19279390,19278796,19277879,19277076,19276674	Gene ID= ENSG00000105705.15 TPM= 39.3 Transcript Type= protein_coding
chr19	19320681	19358755	19320681	19358755	+	ENST00000262815.12@MAU2	ENST00000262815.12	protein_coding	19320681,19335718,19336122,19337170,19338845,19340846,19341252,19342535,19342776,19343837,19344849,19345304,19347280,19348889,19349155,19349325,19354355,19355264,19355708	19321135,19335735,19336187,19337265,19338939,19340873,19341407,19342681,19342866,19343940,19344926,19345369,19347366,19348938,19349232,19349436,19354445,19355391,19358755	Gene ID= ENSG00000129933.20 TPM= 26.55 Transcript Type= protein_coding
chr19	19466086	19469412	19466086	19469412	+	transcript3064.chr19.nnic@NA	transcript3064.chr19.nnic	NA	19466086	19469412	Gene ID= novel_gene_chr19_3065 TPM= 2.12 Transcript Type= NA
chr19	19515755	19528198	19515755	19528198	+	ENST00000507754.8@NDUFA13	ENST00000507754.8	protein_coding	19515755,19526182,19527281,19527701,19528007	19516332,19526260,19527352,19527770,19528198	Gene ID= ENSG00000186010.18 TPM= 779.63 Transcript Type= protein_coding
chr19	19516207	19528198	19516207	19528198	+	transcript3057.chr19.nnic@AC011448.1	transcript3057.chr19.nnic	protein_coding	19516207,19526182,19527701,19528007	19516332,19526260,19527770,19528198	Gene ID= ENSG00000258674.5 TPM= 47.8 Transcript Type= NA
chr19	19519047	19521045	19519047	19521045	-	transcript3066.chr19.nnic@NA	transcript3066.chr19.nnic	NA	19519047	19521045	Gene ID= novel_gene_chr19_3067 TPM= 7.44 Transcript Type= NA
chr19	19535300	19537578	19535300	19537578	+	transcript3062.chr19.nnic@NA	transcript3062.chr19.nnic	NA	19535300	19537578	Gene ID= novel_gene_chr19_3063 TPM= 12.75 Transcript Type= NA
chr19	19645203	19663693	19645203	19663693	-	ENST00000357324.10@ATP13A1	ENST00000357324.10	protein_coding	19663271,19659898,19659601,19657336,19656994,19656847,19656660,19656054,19655878,19655528,19655316,19655119,19654543,19653969,19653784,19652595,19651689,19649741,19649567,19647599,19647414,19647129,19646205,19645874,19645647,19645203	19663693,19659987,19659791,19657408,19657149,19656916,19656766,19656183,19655933,19655654,19655453,19655239,19654700,19654144,19653894,19652720,19651797,19649940,19649663,19647759,19647528,19647325,19646347,19645985,19645790,19645532	Gene ID= ENSG00000105726.16 TPM= 22.31 Transcript Type= protein_coding
chr19	19668796	19680952	19668796	19680952	+	ENST00000318110.9@ZNF101	ENST00000318110.9	protein_coding	19668796,19677864,19678726,19679181,19680856	19668966,19677990,19678786,19680554,19680952	Gene ID= ENSG00000181896.11 TPM= 1.06 Transcript Type= nonsense_mediated_decay
chr19	19710471	19733097	19710471	19733097	-	ENST00000344099.3@ZNF14	ENST00000344099.3	protein_coding	19732956,19714361,19714091,19710471	19733097,19714487,19714151,19713089	Gene ID= ENSG00000105708.8 TPM= 4.25 Transcript Type= protein_coding
chr19	19798789	19821722	19798789	19821722	-	ENST00000545006.1@ZNF506	ENST00000545006.1	protein_coding	19821601,19806942,19806031,19798789	19821722,19807068,19806126,19799450	Gene ID= ENSG00000081665.13 TPM= 4.25 Transcript Type= protein_coding
chr19	19901061	19935575	19901061	19935575	+	ENST00000343769.5@ZNF93	ENST00000343769.5	protein_coding	19901061,19915280,19916560,19933182	19901091,19915406,19916655,19935575	Gene ID= ENSG00000184635.15 TPM= 1.06 Transcript Type= protein_coding
chr19	20170525	20172591	20170525	20172591	-	transcript3106.chr19.nnic@NA	transcript3106.chr19.nnic	NA	20170525	20172591	Gene ID= novel_gene_chr19_3107 TPM= 2.12 Transcript Type= NA
chr19	20404967	20424969	20404967	20424969	-	ENST00000597334.1@ZNF826P	ENST00000597334.1	transcribed_unprocessed_pseudogene	20424786,20408950,20404967	20424969,20409045,20406132	Gene ID= ENSG00000231205.11 TPM= 1.06 Transcript Type= processed_transcript
chr19	20529069	20530647	20529069	20530647	-	transcript3111.chr19.nnic@NA	transcript3111.chr19.nnic	NA	20529069	20530647	Gene ID= novel_gene_chr19_3112 TPM= 2.12 Transcript Type= NA
chr19	20555194	20556698	20555194	20556698	-	transcript3115.chr19.nnic@NA	transcript3115.chr19.nnic	NA	20555194	20556698	Gene ID= novel_gene_chr19_3116 TPM= 2.12 Transcript Type= NA
chr19	20644702	20661596	20644702	20661596	-	ENST00000291750.6@ZNF626	ENST00000291750.6	protein_coding	20661444,20646279,20645684,20644702	20661596,20646405,20645779,20645448	Gene ID= ENSG00000188171.15 TPM= 4.25 Transcript Type= protein_coding
chr19	20923288	20950697	20923288	20950697	+	ENST00000328178.12@ZNF85	ENST00000328178.12	protein_coding	20923288,20934024,20934949,20948744	20923403,20934150,20935047,20950697	Gene ID= ENSG00000105750.14 TPM= 1.06 Transcript Type= protein_coding
chr19	21020620	21060050	21020620	21060050	+	ENST00000261560.9@ZNF430	ENST00000261560.9	protein_coding	21020620,21022789,21033456,21034086,21056631	21020803,21022881,21033582,21034184,21060050	Gene ID= ENSG00000118620.12 TPM= 4.25 Transcript Type= protein_coding
chr19	21082125	21084171	21082125	21084171	+	transcript3132.chr19.nnic@NA	transcript3132.chr19.nnic	NA	21082125	21084171	Gene ID= novel_gene_chr19_3133 TPM= 2.12 Transcript Type= NA
chr19	21082203	21125094	21082203	21125094	+	ENST00000613286.4@ZNF714	ENST00000613286.4	protein_coding	21082203,21083978,21098185,21098815,21109623,21116807,21124961	21082348,21084069,21098311,21098910,21109644,21118885,21125094	Gene ID= ENSG00000160352.15 TPM= 1.06 Transcript Type= nonsense_mediated_decay
chr19	21142006	21190225	21142006	21190225	+	transcript3143.chr19.nnic@ZNF431	transcript3143.chr19.nnic	protein_coding	21142006,21143551,21166335,21167571,21189865	21142186,21143643,21166461,21167666,21190225	Gene ID= ENSG00000196705.8 TPM= 3.19 Transcript Type= NA
chr19	21358964	21376474	21358964	21376474	+	transcript3150.chr19.nnic@ZNF738	transcript3150.chr19.nnic	protein_coding	21358964,21361766,21375238,21375869,21376162	21359143,21361858,21375364,21375964,21376474	Gene ID= ENSG00000172687.13 TPM= 2.12 Transcript Type= NA
chr19	21358930	21379300	21358930	21379300	+	ENST00000311015.7@ZNF738	ENST00000311015.7	protein_coding	21358930,21361766,21375238,21375869,21377389	21359143,21361858,21375364,21375964,21379300	Gene ID= ENSG00000172687.13 TPM= 2.12 Transcript Type= protein_coding
chr19	21722766	21767628	21722766	21767628	-	ENST00000358296.10@ZNF100	ENST00000358296.10	protein_coding	21767427,21765694,21744941,21744017,21722766	21767628,21765786,21745067,21744115,21727989	Gene ID= ENSG00000197020.10 TPM= 2.12 Transcript Type= protein_coding
chr19	21807326	21836208	21807326	21836208	-	ENST00000354959.8@ZNF43	ENST00000354959.8	protein_coding	21836036,21819095,21817888,21807326	21836208,21819221,21817986,21809807	Gene ID= ENSG00000198521.11 TPM= 5.31 Transcript Type= protein_coding
chr19	21834042	21834955	21834042	21834955	+	transcript3202.chr19.nnic@NA	transcript3202.chr19.nnic	NA	21834042	21834955	Gene ID= novel_gene_chr19_3203 TPM= 4.25 Transcript Type= NA
chr19	21932874	22010971	21932874	22010971	-	transcript3186.chr19.nnic@ZNF208	transcript3186.chr19.nnic	protein_coding	22010792,21988783,21987216,21932874	22010971,21988909,21987311,21933237	Gene ID= ENSG00000160321.14 TPM= 3.19 Transcript Type= NA
chr19	21986728	22010971	21986728	22010971	-	transcript3190.chr19.nic@ZNF208	transcript3190.chr19.nic	protein_coding	22010792,21988783,21987216,21986728	22010971,21988909,21987311,21987063	Gene ID= ENSG00000160321.14 TPM= 4.25 Transcript Type= NA
chr19	21986170	22010971	21986170	22010971	-	transcript3196.chr19.nic@ZNF208	transcript3196.chr19.nic	protein_coding	22010792,21988783,21986170	22010971,21988909,21987311	Gene ID= ENSG00000160321.14 TPM= 3.19 Transcript Type= NA
chr19	21939773	22010943	21939773	22010943	-	ENST00000601773.5@ZNF208	ENST00000601773.5	protein_coding	22010792,21988783,21987216,21939773	22010943,21988909,21987311,21941424	Gene ID= ENSG00000160321.14 TPM= 1.06 Transcript Type= protein_coding
chr19	21968452	21972584	21968452	21972584	-	transcript3204.chr19.nnic@NA	transcript3204.chr19.nnic	NA	21968452	21972584	Gene ID= novel_gene_chr19_3205 TPM= 3.19 Transcript Type= NA
chr19	21972541	21975851	21972541	21975851	+	transcript3200.chr19.nnic@NA	transcript3200.chr19.nnic	NA	21972541,21974072	21973987,21975851	Gene ID= novel_gene_chr19_3201 TPM= 8.5 Transcript Type= NA
chr19	23255053	23257939	23255053	23257939	-	ENST00000593576.1@IPO5P1	ENST00000593576.1	transcribed_processed_pseudogene	23255053	23257939	Gene ID= ENSG00000269837.1 TPM= 5.31 Transcript Type= processed_transcript
chr19	23269886	23274247	23269886	23274247	-	ENST00000638919.1@AC092329.4	ENST00000638919.1	processed_transcript	23274076,23269886	23274247,23270292	Gene ID= ENSG00000284428.1 TPM= 1.06 Transcript Type= lincRNA
chr19	23357696	23395560	23357696	23395560	-	ENST00000300619.11@ZNF91	ENST00000300619.11	protein_coding	23395325,23374638,23373742,23357696	23395560,23374764,23373837,23362725	Gene ID= ENSG00000167232.13 TPM= 9.56 Transcript Type= protein_coding
chr19	23359227	23492676	23359227	23492676	-	transcript3215.chr19.nnic@ZNF91	transcript3215.chr19.nnic	protein_coding	23492637,23491315,23490701,23359227	23492676,23492048,23490729,23362725	Gene ID= ENSG00000167232.13 TPM= 3.19 Transcript Type= NA
chr19	24087160	24129961	24087160	24129961	+	ENST00000611359.3@ZNF254	ENST00000611359.3	protein_coding	24087160,24106548,24126254	24087337,24106643,24129961	Gene ID= ENSG00000213096.10 TPM= 1.06 Transcript Type= protein_coding
chr19	24087160	24129961	24087160	24129961	+	ENST00000616028.2@ZNF254	ENST00000616028.2	protein_coding	24087160,24126254	24087337,24129961	Gene ID= ENSG00000213096.10 TPM= 1.06 Transcript Type= protein_coding
chr19	24087193	24129852	24087193	24129852	+	ENST00000357002.4@ZNF254	ENST00000357002.4	protein_coding	24087193,24105940,24106548,24126254	24087337,24106066,24106643,24129852	Gene ID= ENSG00000213096.10 TPM= 1.06 Transcript Type= protein_coding
chr19	24049216	24051956	24049216	24051956	-	transcript3241.chr19.nnic@NA	transcript3241.chr19.nnic	NA	24049216	24051956	Gene ID= novel_gene_chr19_3242 TPM= 9.56 Transcript Type= NA
chr19	27730274	27793926	27730274	27793926	-	transcript3248.chr19.nnic@LINC00662	transcript3248.chr19.nnic	lincRNA	27793532,27793000,27746098,27732796,27730274	27793926,27793232,27746340,27732967,27730707	Gene ID= ENSG00000261824.6 TPM= 3.19 Transcript Type= NA
chr19	27730274	27793431	27730274	27793431	-	transcript3251.chr19.nnic@LINC00662	transcript3251.chr19.nnic	lincRNA	27793000,27746098,27732796,27730274	27793431,27746340,27732967,27730707	Gene ID= ENSG00000261824.6 TPM= 2.12 Transcript Type= NA
chr19	27793470	27806782	27793470	27806782	+	transcript3255.chr19.nnic@AC006504.5	transcript3255.chr19.nnic	lincRNA	27793470,27805605	27793609,27806782	Gene ID= ENSG00000267575.6 TPM= 2.12 Transcript Type= NA
chr19	27793494	27806782	27793494	27806782	+	ENST00000590628.1@AC006504.5	ENST00000590628.1	lincRNA	27793494,27805605	27793650,27806782	Gene ID= ENSG00000267575.6 TPM= 6.37 Transcript Type= lincRNA
chr19	27800270	27803470	27800270	27803470	+	transcript3257.chr19.nnic@NA	transcript3257.chr19.nnic	NA	27800270	27803470	Gene ID= novel_gene_chr19_3258 TPM= 3.19 Transcript Type= NA
chr19	29205321	29213541	29205321	29213541	-	ENST00000304863.5@UQCRFS1	ENST00000304863.5	protein_coding	29212905,29205321	29213541,29208158	Gene ID= ENSG00000169021.5 TPM= 596.93 Transcript Type= protein_coding
chr19	29213235	29215815	29213235	29215815	+	ENST00000587859.1@AC007786.1	ENST00000587859.1	lincRNA	29213235,29215281	29213408,29215815	Gene ID= ENSG00000267498.1 TPM= 1.06 Transcript Type= lincRNA
chr19	29604017	29615800	29604017	29615800	+	ENST00000585603.5@POP4	ENST00000585603.5	protein_coding	29604017,29608657,29610409,29611862,29612117,29613871,29615244	29606325,29608709,29610632,29611939,29612178,29613972,29615800	Gene ID= ENSG00000105171.9 TPM= 23.37 Transcript Type= protein_coding
chr19	29665056	29675457	29665056	29675457	+	ENST00000436066.3@PLEKHF1	ENST00000436066.3	protein_coding	29665056,29673824	29665505,29675457	Gene ID= ENSG00000166289.5 TPM= 41.42 Transcript Type= protein_coding
chr19	29698886	29715789	29698886	29715789	-	ENST00000614091.4@C19orf12	ENST00000614091.4	protein_coding	29715563,29708254,29698886	29715789,29708423,29702977	Gene ID= ENSG00000131943.17 TPM= 2.12 Transcript Type= protein_coding
chr19	29701163	29715221	29701163	29715221	-	ENST00000392276.1@C19orf12	ENST00000392276.1	protein_coding	29715125,29701163	29715221,29702977	Gene ID= ENSG00000131943.17 TPM= 18.06 Transcript Type= protein_coding
chr19	29811874	29824308	29811874	29824308	+	transcript3290.chr19.nnic@CCNE1	transcript3290.chr19.nnic	protein_coding	29811874,29812689,29812969,29817137,29817406,29820702,29821722,29821996,29822240,29822446,29823655	29812152,29812776,29813037,29817282,29817541,29820848,29821817,29822130,29822351,29822603,29824308	Gene ID= ENSG00000105173.13 TPM= 3.19 Transcript Type= NA
chr19	29942211	30015695	29942211	30015695	+	transcript3294.chr19.nic@URI1	transcript3294.chr19.nic	protein_coding	29942211,29971193,29985223,29986282,30005361,30005651,30007470,30009005,30011094,30012285,30015536	29942664,29971227,29985301,29986417,30005452,30005708,30007638,30009353,30011236,30012531,30015695	Gene ID= ENSG00000105176.17 TPM= 7.44 Transcript Type= NA
chr19	29942211	30014734	29942211	30014734	+	transcript3298.chr19.nic@URI1	transcript3298.chr19.nic	protein_coding	29942211,29971193,29985223,29986282,30005361,30005651,30007470,30009005,30011094,30012285	29942664,29971227,29985301,29986417,30005452,30005708,30007638,30009353,30011236,30014734	Gene ID= ENSG00000105176.17 TPM= 3.19 Transcript Type= NA
chr19	29942231	30015695	29942231	30015695	+	transcript3301.chr19.nic@URI1	transcript3301.chr19.nic	protein_coding	29942231,29985223,29986282,30005361,30005651,30007470,30009005,30011094,30012285,30015536	29942664,29985301,29986417,30005452,30005708,30007638,30009353,30011236,30012531,30015695	Gene ID= ENSG00000105176.17 TPM= 2.12 Transcript Type= NA
chr19	29942231	30014091	29942231	30014091	+	transcript3303.chr19.nic@URI1	transcript3303.chr19.nic	protein_coding	29942231,29985223,29986282,30005361,30005651,30007470,30009005,30011094,30012285	29942664,29985301,29986417,30005452,30005708,30007638,30009353,30011236,30014091	Gene ID= ENSG00000105176.17 TPM= 2.12 Transcript Type= NA
chr19	29942261	30015704	29942261	30015704	+	ENST00000574110.5@URI1	ENST00000574110.5	protein_coding	29942261,29985223,29986282,30005361,30005651,30007470,30009005,30011094,30012285,30014887	29942664,29985301,29986417,30005452,30005708,30007638,30009353,30011236,30012531,30015704	Gene ID= ENSG00000105176.17 TPM= 7.44 Transcript Type= nonsense_mediated_decay
chr19	30055885	30057655	30055885	30057655	-	transcript3305.chr19.nnic@NA	transcript3305.chr19.nnic	NA	30055885	30057655	Gene ID= novel_gene_chr19_3306 TPM= 2.12 Transcript Type= NA
chr19	30224851	30541498	30224851	30541498	-	transcript3313.chr19.nnic@AC005597.1	transcript3313.chr19.nnic	antisense_RNA	30540775,30534845,30443558,30284070,30224851	30541498,30534997,30445732,30284138,30224913	Gene ID= ENSG00000267223.1 TPM= 9.03 Transcript Type= NA
chr19	30224851	30549065	30224851	30549065	-	transcript3314.chr19.nnic@AC005597.1	transcript3314.chr19.nnic	antisense_RNA	30547952,30534845,30443558,30284070,30224851	30549065,30535008,30445732,30284138,30224913	Gene ID= ENSG00000267223.1 TPM= 9.03 Transcript Type= NA
chr19	30224851	30548752	30224851	30548752	+	transcript3311.chr19.nnic@ZNF536	transcript3311.chr19.nnic	protein_coding	30224851,30284070,30296155,30443561,30534845,30547952	30224913,30284141,30296243,30445732,30535008,30548752	Gene ID= ENSG00000198597.8 TPM= 5.31 Transcript Type= NA
chr19	30224851	30549065	30224851	30549065	+	transcript3312.chr19.nnic@ZNF536	transcript3312.chr19.nnic	protein_coding	30224851,30284070,30352368,30443561,30534845,30547952	30224913,30284141,30352484,30445732,30535008,30549065	Gene ID= ENSG00000198597.8 TPM= 25.49 Transcript Type= NA
chr19	30224851	30355493	30224851	30355493	+	transcript3318.chr19.nnic@ZNF536	transcript3318.chr19.nnic	protein_coding	30224851,30284070,30352368	30224913,30284141,30355493	Gene ID= ENSG00000198597.8 TPM= 2.12 Transcript Type= NA
chr19	30372412	30558059	30372412	30558059	+	ENST00000355537.3@ZNF536	ENST00000355537.3	protein_coding	30372412,30443561,30534847,30547943,30557157	30372556,30445732,30534999,30549514,30558059	Gene ID= ENSG00000198597.8 TPM= 2.66 Transcript Type= protein_coding
chr19	30535934	30539070	30535934	30539070	+	transcript3321.chr19.nnic@NA	transcript3321.chr19.nnic	NA	30535934	30539070	Gene ID= novel_gene_chr19_3322 TPM= 2.12 Transcript Type= NA
chr19	30553956	30558058	30553956	30558058	+	ENST00000623331.1@AC011504.1	ENST00000623331.1	TEC	30553956	30558058	Gene ID= ENSG00000280061.1 TPM= 10.09 Transcript Type= TEC
chr19	31347604	31348481	31347604	31348481	+	transcript3323.chr19.nnic@NA	transcript3323.chr19.nnic	NA	31347604	31348481	Gene ID= novel_gene_chr19_3324 TPM= 5.31 Transcript Type= NA
chr19	32382727	32386850	32382727	32386850	+	transcript3331.chr19.nnic@NA	transcript3331.chr19.nnic	NA	32382727	32386850	Gene ID= novel_gene_chr19_3332 TPM= 6.37 Transcript Type= NA
chr19	32390050	32405560	32390050	32405560	-	ENST00000592680.2@AC007773.1	ENST00000592680.2	antisense_RNA	32404991,32399751,32390050	32405560,32399868,32390333	Gene ID= ENSG00000267213.4 TPM= 1.06 Transcript Type= antisense_RNA
chr19	32581068	32587427	32581068	32587427	+	ENST00000590247.6@PDCD5	ENST00000590247.6	protein_coding	32581068,32582195,32584950,32585816,32586858,32587253	32581327,32582232,32585011,32585907,32586929,32587427	Gene ID= ENSG00000105185.11 TPM= 130.11 Transcript Type= protein_coding
chr19	32581202	32587425	32581202	32587425	+	ENST00000221784.8@PDCD5	ENST00000221784.8	protein_coding	32581202,32582195,32584955,32585816,32586858,32587253	32581327,32582232,32585011,32585907,32586929,32587425	Gene ID= ENSG00000105185.11 TPM= 21.77 Transcript Type= nonsense_mediated_decay
chr19	32597007	32675199	32597007	32675199	-	ENST00000306065.8@ANKRD27	ENST00000306065.8	protein_coding	32675071,32658914,32649682,32646459,32644325,32643572,32643431,32643287,32643123,32642024,32640307,32639356,32631402,32628722,32628083,32626712,32625874,32622422,32619494,32619260,32617589,32615658,32607635,32605835,32604263,32602015,32599972,32599704,32597007	32675199,32659045,32649792,32646615,32644479,32643631,32643484,32643352,32643199,32642145,32640385,32639488,32631494,32628849,32628165,32626827,32625966,32622619,32619553,32619379,32617633,32615780,32607832,32605954,32604424,32602126,32600050,32599776,32598378	Gene ID= ENSG00000105186.15 TPM= 18.77 Transcript Type= protein_coding
chr19	32597007	32675202	32597007	32675202	-	transcript3340.chr19.nic@ANKRD27	transcript3340.chr19.nic	protein_coding	32675071,32658914,32649682,32644325,32643572,32643431,32643287,32643123,32642024,32640307,32639356,32631402,32628722,32628083,32626712,32625874,32622422,32619494,32619260,32617589,32615658,32607635,32605835,32604263,32602015,32599972,32599704,32597007	32675202,32659045,32649792,32644479,32643631,32643484,32643352,32643199,32642145,32640385,32639488,32631494,32628849,32628165,32626827,32625966,32622619,32619553,32619379,32617633,32615780,32607832,32605954,32604424,32602126,32600050,32599776,32598378	Gene ID= ENSG00000105186.15 TPM= 4.96 Transcript Type= NA
chr19	32597007	32675202	32597007	32675202	-	transcript3341.chr19.nic@ANKRD27	transcript3341.chr19.nic	protein_coding	32675071,32658914,32649682,32646459,32644325,32643572,32643287,32643123,32642024,32640307,32639356,32631402,32628722,32628083,32626712,32625874,32622422,32619494,32619260,32617589,32615658,32607635,32605835,32604263,32602015,32599972,32599704,32597007	32675202,32659045,32649792,32646615,32644479,32643631,32643484,32643199,32642145,32640385,32639488,32631494,32628849,32628165,32626827,32625966,32622619,32619553,32619379,32617633,32615780,32607832,32605954,32604424,32602126,32600050,32599776,32598378	Gene ID= ENSG00000105186.15 TPM= 3.9 Transcript Type= NA
chr19	32691961	32713796	32691961	32713796	+	ENST00000397061.3@NUDT19	ENST00000397061.3	protein_coding	32691961,32709185,32711752	32692674,32709392,32713796	Gene ID= ENSG00000213965.3 TPM= 11.68 Transcript Type= protein_coding
chr19	32968909	32971991	32968909	32971991	-	ENST00000591863.1@CEP89	ENST00000591863.1	protein_coding	32971836,32968909	32971991,32971655	Gene ID= ENSG00000121289.17 TPM= 4.25 Transcript Type= protein_coding
chr19	33080880	33130542	33080880	33130542	+	ENST00000170564.6@GPATCH1	ENST00000170564.6	protein_coding	33080880,33088134,33090780,33093359,33094172,33095762,33096207,33097755,33101495,33106695,33109717,33111724,33112486,33113767,33114253,33117825,33119010,33125105,33126588,33130130	33081266,33088268,33090865,33093519,33094269,33095820,33096446,33097902,33101574,33106899,33110016,33111902,33112613,33113903,33114419,33118041,33119117,33125202,33126733,33130542	Gene ID= ENSG00000076650.6 TPM= 8.5 Transcript Type= protein_coding
chr19	33194209	33207639	33194209	33207639	+	transcript3365.chr19.nnic@LRP3	transcript3365.chr19.nnic	protein_coding	33194209,33196730,33202848,33204638,33205246,33206556,33206988	33194858,33196777,33202986,33204852,33206362,33206733,33207639	Gene ID= ENSG00000130881.13 TPM= 15.22 Transcript Type= NA
chr19	33194209	33207639	33194209	33207639	+	transcript3367.chr19.nic@LRP3	transcript3367.chr19.nic	protein_coding	33194209,33196730,33202848,33204638,33206601,33206988	33194858,33196777,33202986,33206362,33206733,33207639	Gene ID= ENSG00000130881.13 TPM= 12.57 Transcript Type= NA
chr19	33194317	33207639	33194317	33207639	+	transcript3368.chr19.nnic@LRP3	transcript3368.chr19.nnic	protein_coding	33194317,33196730,33202848,33205246,33206601,33206988	33194858,33196777,33202986,33206362,33206733,33207639	Gene ID= ENSG00000130881.13 TPM= 13.63 Transcript Type= NA
chr19	33373330	33382686	33373330	33382686	+	ENST00000284000.8@CEBPG	ENST00000284000.8	protein_coding	33373330,33379144	33373895,33382686	Gene ID= ENSG00000153879.8 TPM= 47.8 Transcript Type= protein_coding
chr19	33386950	33521794	33386950	33521794	-	ENST00000244137.11@PEPD	ENST00000244137.11	protein_coding	33521744,33512593,33511028,33500938,33493290,33489996,33478046,33463987,33462995,33413575,33411672,33401721,33391295,33387890,33386950	33521794,33512776,33511155,33501001,33493337,33490057,33478090,33464062,33463041,33413643,33411749,33401869,33391479,33388081,33387481	Gene ID= ENSG00000124299.13 TPM= 86.04 Transcript Type= protein_coding
chr19	33429917	33432008	33429917	33432008	+	transcript3377.chr19.nnic@NA	transcript3377.chr19.nnic	NA	33429917	33432008	Gene ID= novel_gene_chr19_3378 TPM= 3.19 Transcript Type= NA
chr19	33796862	33815763	33796862	33815763	+	ENST00000284006.10@KCTD15	ENST00000284006.10	protein_coding	33796862,33798668,33800428,33801167,33806863,33811247,33811791	33796987,33798766,33800520,33801342,33807007,33811552,33815763	Gene ID= ENSG00000153885.14 TPM= 6.37 Transcript Type= protein_coding
chr19	34172568	34229288	34172568	34229288	+	ENST00000433627.9@LSM14A	ENST00000433627.9	protein_coding	34172568,34194478,34196634,34208929,34215124,34215596,34219391,34219706,34221507,34226408,34227365	34172763,34194641,34196763,34209051,34215300,34215661,34219573,34219877,34221738,34226464,34229288	Gene ID= ENSG00000257103.8 TPM= 12.21 Transcript Type= protein_coding
chr19	34172566	34229515	34172566	34229515	+	ENST00000544216.7@LSM14A	ENST00000544216.7	protein_coding	34172566,34194478,34196634,34208929,34215124,34215596,34219391,34219706,34221507,34227365	34172763,34194641,34196763,34209051,34215300,34215661,34219573,34219877,34221738,34229515	Gene ID= ENSG00000257103.8 TPM= 3.72 Transcript Type= protein_coding
chr19	34254537	34355586	34254537	34355586	+	ENST00000299505.6@KIAA0355	ENST00000299505.6	protein_coding	34254537,34299679,34319907,34327421,34327771,34327990,34330189,34333704,34339867,34341422,34347877,34349016,34351514,34352647	34254614,34300968,34320116,34327561,34327866,34328151,34330347,34333801,34339992,34342455,34348042,34349153,34351592,34355586	Gene ID= ENSG00000166398.12 TPM= 11.68 Transcript Type= protein_coding
chr19	34364982	34400335	34364982	34400335	+	ENST00000588991.6@GPI	ENST00000588991.6	protein_coding	34364982,34365260,34366345,34366783,34368583,34377503,34377735,34378934,34379518,34381466,34393248,34393728,34393914,34396301,34396581,34399207,34399556,34399719,34399901	34365019,34365388,34366435,34366851,34368702,34377586,34377881,34379005,34379562,34381519,34393308,34393771,34394066,34396430,34396657,34399335,34399631,34399785,34400335	Gene ID= ENSG00000105220.14 TPM= 100.14 Transcript Type= protein_coding
chr19	34365026	34400328	34365026	34400328	+	ENST00000356487.9@GPI	ENST00000356487.9	protein_coding	34365026,34366345,34366783,34368583,34377503,34377735,34378934,34379518,34381466,34393248,34393728,34393914,34396301,34396581,34399207,34399556,34399719,34399901	34365388,34366435,34366851,34368702,34377586,34377881,34379005,34379562,34381519,34393308,34393771,34394066,34396430,34396657,34399335,34399631,34399785,34400328	Gene ID= ENSG00000105220.14 TPM= 550.23 Transcript Type= protein_coding
chr19	34399900	34402413	34399900	34402413	+	transcript3431.chr19.nnic@NA	transcript3431.chr19.nnic	NA	34399900	34402413	Gene ID= novel_gene_chr19_3432 TPM= 50.98 Transcript Type= NA
chr19	34404384	34426167	34404384	34426167	+	ENST00000246535.3@PDCD2L	ENST00000246535.3	protein_coding	34404384,34404649,34404930,34409161,34413737,34421519,34425990	34404538,34404815,34404990,34409510,34413847,34421667,34426167	Gene ID= ENSG00000126249.7 TPM= 4.25 Transcript Type= protein_coding
chr19	34404425	34426150	34404425	34426150	+	ENST00000587385.6@PDCD2L	ENST00000587385.6	protein_coding	34404425,34404649,34409161,34413737,34421519,34425990	34404538,34404990,34409510,34413847,34421667,34426150	Gene ID= ENSG00000126249.7 TPM= 1.06 Transcript Type= retained_intron
chr19	34428403	34469890	34428403	34469890	+	transcript3439.chr19.nic@UBA2	transcript3439.chr19.nic	protein_coding	34428403,34430093,34430576,34431861,34433348,34434868,34438645,34443844,34445000,34450265,34451981,34454260,34454444,34458769,34460470,34464026,34466878,34469040	34428570,34430186,34430659,34431931,34433412,34434968,34438766,34443911,34445121,34450364,34452147,34454353,34454556,34458924,34460566,34464131,34467014,34469890	Gene ID= ENSG00000126261.12 TPM= 4.25 Transcript Type= NA
chr19	34428363	34471251	34428363	34471251	+	ENST00000246548.8@UBA2	ENST00000246548.8	protein_coding	34428363,34430576,34431861,34433348,34434868,34438645,34443844,34445000,34450265,34451981,34454260,34454444,34458769,34460470,34464026,34466878,34469040	34428570,34430659,34431931,34433412,34434968,34438766,34443911,34445121,34450364,34452147,34454353,34454556,34458924,34460566,34464131,34467014,34471251	Gene ID= ENSG00000126261.12 TPM= 66.92 Transcript Type= protein_coding
chr19	34428356	34469890	34428356	34469890	+	transcript3441.chr19.nic@UBA2	transcript3441.chr19.nic	protein_coding	34428356,34431861,34433348,34434868,34438645,34443844,34445000,34450265,34451981,34454260,34454444,34458769,34460470,34464026,34466878,34469040	34428570,34431931,34433412,34434968,34438766,34443911,34445121,34450364,34452147,34454353,34454556,34458924,34460566,34464131,34467014,34469890	Gene ID= ENSG00000126261.12 TPM= 3.19 Transcript Type= NA
chr19	34428508	34469890	34428508	34469890	+	transcript3444.chr19.nnic@UBA2	transcript3444.chr19.nnic	protein_coding	34428508,34434868,34438645,34443844,34445000,34450265,34451981,34454260,34454444,34458769,34464026,34466878,34469040	34428570,34434968,34438766,34443911,34445121,34450364,34452147,34454353,34454556,34458924,34464131,34467014,34469890	Gene ID= ENSG00000126261.12 TPM= 2.12 Transcript Type= NA
chr19	34481682	34501173	34481682	34501173	+	transcript3459.chr19.nnic@WTIP	transcript3459.chr19.nnic	protein_coding	34481682,34490376,34493037,34493492,34494586,34495703,34500129	34482641,34490477,34493104,34493622,34494637,34495771,34501173	Gene ID= ENSG00000142279.12 TPM= 22.31 Transcript Type= NA
chr19	34503458	34506352	34503458	34506352	+	transcript3462.chr19.nnic@NA	transcript3462.chr19.nnic	NA	34503458	34506352	Gene ID= novel_gene_chr19_3463 TPM= 3.19 Transcript Type= NA
chr19	34576840	34677179	34576840	34677179	+	transcript3464.chr19.nnic@AC020910.6	transcript3464.chr19.nnic	TEC	34576840,34577269,34577545,34675630	34576996,34577458,34577732,34677179	Gene ID= ENSG00000279971.1 TPM= 4.25 Transcript Type= NA
chr19	34677668	34686392	34677668	34686392	+	transcript3472.chr19.nic@ZNF302	transcript3472.chr19.nic	protein_coding	34677668,34678737,34679828,34682777,34683155,34684252	34677833,34678813,34679959,34682897,34683238,34686392	Gene ID= ENSG00000089335.20 TPM= 2.34 Transcript Type= NA
chr19	34677668	34686396	34677668	34686396	+	transcript3482.chr19.nic@ZNF302	transcript3482.chr19.nic	protein_coding	34677668,34678737,34682777,34683155,34683992	34677833,34678813,34682897,34683238,34686396	Gene ID= ENSG00000089335.20 TPM= 6.59 Transcript Type= NA
chr19	34677662	34686397	34677662	34686397	+	ENST00000457781.6@ZNF302	ENST00000457781.6	protein_coding	34677662,34678737,34682777,34683155,34684252	34677833,34678813,34682897,34683238,34686397	Gene ID= ENSG00000089335.20 TPM= 9.77 Transcript Type= protein_coding
chr19	34677678	34686392	34677678	34686392	+	ENST00000505242.5@ZNF302	ENST00000505242.5	protein_coding	34677678,34678737,34682777,34683155,34684252	34678103,34678813,34682897,34683238,34686392	Gene ID= ENSG00000089335.20 TPM= 4.46 Transcript Type= protein_coding
chr19	34677689	34686391	34677689	34686391	+	ENST00000423823.6@ZNF302	ENST00000423823.6	protein_coding	34677689,34678737,34682777,34683155,34684252	34677856,34678813,34682897,34683238,34686391	Gene ID= ENSG00000089335.20 TPM= 6.59 Transcript Type= protein_coding
chr19	34733297	34734543	34733297	34734543	-	transcript3496.chr19.nnic@NA	transcript3496.chr19.nnic	NA	34733297	34734543	Gene ID= novel_gene_chr19_3497 TPM= 3.19 Transcript Type= NA
chr19	34734191	34742872	34734191	34742872	+	transcript3492.chr19.nic@ZNF181	transcript3492.chr19.nic	protein_coding	34734191,34734970,34739148,34739523,34740611	34734360,34735046,34739268,34739621,34742872	Gene ID= ENSG00000197841.14 TPM= 9.91 Transcript Type= NA
chr19	34766968	34773200	34766968	34773200	-	ENST00000588760.1@ZNF599	ENST00000588760.1	protein_coding	34772824,34769429,34766968	34773200,34769555,34767411	Gene ID= ENSG00000153896.17 TPM= 4.25 Transcript Type= protein_coding
chr19	34926903	34945170	34926903	34945170	+	ENST00000439785.5@ZNF30	ENST00000439785.5	protein_coding	34926903,34929884,34931843,34933625,34943223	34927282,34929956,34931993,34933723,34945170	Gene ID= ENSG00000168661.14 TPM= 1.06 Transcript Type= protein_coding
chr19	34926980	34945168	34926980	34945168	+	ENST00000601957.5@ZNF30	ENST00000601957.5	protein_coding	34926980,34929884,34931843,34933628,34942594,34943223	34927216,34929956,34931993,34933723,34942673,34945168	Gene ID= ENSG00000168661.14 TPM= 1.06 Transcript Type= protein_coding
chr19	35000273	35026469	35000273	35026469	+	transcript3512.chr19.nic@GRAMD1A	transcript3512.chr19.nic	protein_coding	35000273,35009119,35009423,35009888,35010092,35010284,35011474,35013256,35013541,35014189,35015824,35019191,35019391,35021502,35021691,35021951,35023427,35026049	35000486,35009329,35009443,35009972,35010195,35010379,35011554,35013368,35013691,35014387,35015967,35019309,35019533,35021605,35021864,35023343,35023547,35026469	Gene ID= ENSG00000089351.14 TPM= 3.01 Transcript Type= NA
chr19	35000328	35014879	35000328	35014879	+	transcript3514.chr19.nic@GRAMD1A	transcript3514.chr19.nic	protein_coding	35000328,35009119,35009423,35009888,35010092,35010284,35011474,35013256,35013541,35014189	35000486,35009329,35009443,35009972,35010195,35010379,35011554,35013368,35013691,35014879	Gene ID= ENSG00000089351.14 TPM= 2.12 Transcript Type= NA
chr19	35000273	35012993	35000273	35012993	+	transcript3515.chr19.nic@GRAMD1A	transcript3515.chr19.nic	protein_coding	35000273,35009119,35009423,35009888,35010092,35010284,35011474	35000486,35009329,35009443,35009972,35010195,35010379,35012993	Gene ID= ENSG00000089351.14 TPM= 6.37 Transcript Type= NA
chr19	35000287	35026469	35000287	35026469	+	ENST00000317991.9@GRAMD1A	ENST00000317991.9	protein_coding	35000287,35009119,35009423,35009888,35010092,35010284,35011474,35013256,35013541,35014189,35015824,35019191,35019391,35021502,35021691,35021951,35022900,35023236,35023427,35026049	35000486,35009329,35009443,35009972,35010195,35010379,35011554,35013368,35013691,35014387,35015967,35019309,35019533,35021605,35021864,35022038,35022911,35023343,35023547,35026469	Gene ID= ENSG00000089351.14 TPM= 44.43 Transcript Type= protein_coding
chr19	35000323	35026469	35000323	35026469	+	ENST00000600231.5@GRAMD1A	ENST00000600231.5	protein_coding	35000323,35009119,35009423,35009888,35010092,35010284,35011474,35013541,35014189,35015824,35019191,35019391,35021502,35021691,35021951,35023236,35023427,35026049	35000486,35009329,35009443,35009972,35010195,35010379,35011554,35013691,35014387,35015967,35019309,35019533,35021605,35021864,35022038,35023343,35023547,35026469	Gene ID= ENSG00000089351.14 TPM= 24.78 Transcript Type= nonsense_mediated_decay
chr19	35030426	35040449	35030426	35040449	+	transcript3531.chr19.nnic@SCN1B	transcript3531.chr19.nnic	protein_coding	35030426,35032528,35033499,35039117,35039635,35039797,35040086	35030860,35032694,35033739,35039258,35039706,35040014,35040449	Gene ID= ENSG00000105711.11 TPM= 33.28 Transcript Type= NA
chr19	35030466	35040449	35030466	35040449	+	ENST00000262631.10@SCN1B	ENST00000262631.10	protein_coding	35030466,35032528,35033499,35039117,35039635,35039797	35030860,35032694,35033739,35039258,35039706,35040449	Gene ID= ENSG00000105711.11 TPM= 106.57 Transcript Type= protein_coding
chr19	35041257	35066571	35041257	35066571	+	transcript3519.chr19.nic@HPN	transcript3519.chr19.nic	protein_coding	35041257,35042308,35049290,35049475,35059673,35059874,35060129,35060347,35060627,35065250,35065539,35065868,35066249	35041872,35042522,35049391,35049516,35059802,35059996,35060169,35060512,35060817,35065345,35065681,35066032,35066571	Gene ID= ENSG00000105707.13 TPM= 4.6 Transcript Type= NA
chr19	35041260	35066571	35041260	35066571	+	transcript3520.chr19.nic@HPN	transcript3520.chr19.nic	protein_coding	35041260,35042453,35049290,35049475,35059673,35059874,35060129,35060347,35060627,35065250,35065539,35065868,35066249	35041872,35042522,35049391,35049516,35059802,35059996,35060169,35060512,35060817,35065345,35065681,35066032,35066571	Gene ID= ENSG00000105707.13 TPM= 6.72 Transcript Type= NA
chr19	35049250	35066571	35049250	35066571	+	transcript3526.chr19.nnic@HPN	transcript3526.chr19.nnic	protein_coding	35049250,35049475,35059673,35060129,35060347,35060627,35065250,35065539,35065868,35066249	35049391,35049516,35059802,35060169,35060512,35060817,35065345,35065681,35066032,35066571	Gene ID= ENSG00000105707.13 TPM= 2.47 Transcript Type= NA
chr19	35124513	35135200	35124513	35135200	-	ENST00000310123.7@LGI4	ENST00000310123.7	protein_coding	35134511,35134033,35133693,35131971,35131789,35131386,35126853,35126270,35124513	35135200,35134104,35133764,35132042,35131860,35131555,35127017,35126775,35125507	Gene ID= ENSG00000153902.13 TPM= 12.21 Transcript Type= protein_coding
chr19	35124513	35135200	35124513	35135200	-	ENST00000392225.7@LGI4	ENST00000392225.7	protein_coding	35134511,35134033,35133693,35131971,35131789,35131386,35126270,35124513	35135200,35134104,35133764,35132042,35131860,35131555,35127017,35125507	Gene ID= ENSG00000153902.13 TPM= 2.66 Transcript Type= protein_coding
chr19	35138993	35143054	35138993	35143054	+	ENST00000612146.4@FXYD1	ENST00000612146.4	protein_coding	35138993,35140076,35140597,35141132,35141536,35142472,35142720,35142917	35139232,35140140,35140629,35141206,35141572,35142521,35142771,35143054	Gene ID= ENSG00000266964.5 TPM= 33.81 Transcript Type= protein_coding
chr19	35139441	35143050	35139441	35143050	+	ENST00000455515.6@FXYD1	ENST00000455515.6	protein_coding	35139441,35140076,35140597,35141132,35141536,35142472,35142720,35142917	35139588,35140140,35140629,35141206,35141572,35142521,35142771,35143050	Gene ID= ENSG00000266964.5 TPM= 27.44 Transcript Type= protein_coding
chr19	35138713	35143050	35138713	35143050	+	transcript3551.chr19.nic@FXYD1	transcript3551.chr19.nic	protein_coding	35138713,35140076,35140597,35141132,35141536,35142472,35142720	35138894,35140140,35140629,35141206,35141572,35142521,35143050	Gene ID= ENSG00000266964.5 TPM= 9.03 Transcript Type= NA
chr19	35139619	35143050	35139619	35143050	+	transcript3556.chr19.nic@FXYD1	transcript3556.chr19.nic	protein_coding	35139619,35140076,35140597,35141132,35141536,35142472,35142720	35139767,35140140,35140629,35141206,35141572,35142521,35143050	Gene ID= ENSG00000266964.5 TPM= 15.4 Transcript Type= NA
chr19	35139726	35143048	35139726	35143048	+	ENST00000588715.5@FXYD1	ENST00000588715.5	protein_coding	35139726,35140076,35140597,35141132,35141536,35142472,35142720,35142917	35139767,35140140,35140629,35141206,35141572,35142521,35142771,35143048	Gene ID= ENSG00000266964.5 TPM= 56.56 Transcript Type= protein_coding
chr19	35154743	35169883	35154743	35169883	+	ENST00000392219.6@FXYD5	ENST00000392219.6	protein_coding	35154743,35155551,35157421,35158344,35160709,35164156,35166142,35166251,35169566	35154809,35155611,35157501,35158400,35160801,35164245,35166171,35166325,35169883	Gene ID= ENSG00000089327.14 TPM= 15.4 Transcript Type= protein_coding
chr19	35154753	35169865	35154753	35169865	+	ENST00000590686.5@FXYD5	ENST00000590686.5	protein_coding	35154753,35155533,35157421,35158344,35160709,35164156,35166142,35166251,35169566	35154809,35155611,35157501,35158400,35160801,35164245,35166171,35166325,35169865	Gene ID= ENSG00000089327.14 TPM= 1.59 Transcript Type= protein_coding
chr19	35166597	35169880	35166597	35169880	+	transcript3570.chr19.nnic@NA	transcript3570.chr19.nnic	NA	35166597	35169880	Gene ID= novel_gene_chr19_3571 TPM= 2.12 Transcript Type= NA
chr19	35248656	35267960	35248656	35267960	+	ENST00000621372.4@LSR	ENST00000621372.4	protein_coding	35248656,35250315,35258945,35261925,35262546,35266359,35266679,35266836,35267109,35267824	35249131,35250659,35259064,35261981,35262692,35266532,35266738,35266967,35267734,35267960	Gene ID= ENSG00000105699.16 TPM= 1.06 Transcript Type= protein_coding
chr19	35248392	35267962	35248392	35267962	+	ENST00000602122.5@LSR	ENST00000602122.5	protein_coding	35248392,35250315,35258945,35262546,35266359,35266679,35266839,35267109,35267824	35249131,35250659,35259064,35262692,35266532,35266738,35266967,35267734,35267962	Gene ID= ENSG00000105699.16 TPM= 7.44 Transcript Type= protein_coding
chr19	35269065	35279812	35269065	35279812	+	ENST00000222305.7@USF2	ENST00000222305.7	protein_coding	35269065,35269446,35269581,35269803,35270447,35270718,35271083,35278698,35278946,35279167	35269163,35269492,35269699,35270003,35270597,35270805,35271141,35278792,35279074,35279812	Gene ID= ENSG00000105698.15 TPM= 41.24 Transcript Type= protein_coding
chr19	35269275	35279813	35269275	35279813	+	transcript3576.chr19.nic@USF2	transcript3576.chr19.nic	protein_coding	35269275,35269581,35269803,35270447,35270718,35271083,35278698,35278946,35279167	35269492,35269699,35270003,35270597,35270805,35271141,35278792,35279074,35279813	Gene ID= ENSG00000105698.15 TPM= 52.4 Transcript Type= NA
chr19	35269601	35279821	35269601	35279821	+	ENST00000607959.5@USF2	ENST00000607959.5	protein_coding	35269601,35269803,35270718,35271083,35278698,35278946,35279167	35269699,35270597,35270805,35271141,35278792,35279074,35279821	Gene ID= ENSG00000105698.15 TPM= 18.94 Transcript Type= retained_intron
chr19	35278081	35279819	35278081	35279819	+	transcript3582.chr19.nnic@NA	transcript3582.chr19.nnic	NA	35278081	35279819	Gene ID= novel_gene_chr19_3583 TPM= 12.75 Transcript Type= NA
chr19	35540738	35545512	35540738	35545512	-	transcript3586.chr19.nic@TMEM147-AS1	transcript3586.chr19.nic	antisense_RNA	35545319,35542911,35541751,35540738	35545512,35543097,35542074,35541584	Gene ID= ENSG00000236144.6 TPM= 4.25 Transcript Type= NA
chr19	35545595	35547526	35545595	35547526	+	ENST00000222284.9@TMEM147	ENST00000222284.9	protein_coding	35545595,35545888,35546526,35546672,35546945,35547119,35547324	35545816,35545957,35546585,35546808,35547029,35547240,35547526	Gene ID= ENSG00000105677.11 TPM= 116.59 Transcript Type= protein_coding
chr19	35545630	35547526	35545630	35547526	+	ENST00000392204.6@TMEM147	ENST00000392204.6	protein_coding	35545630,35546526,35546672,35546945,35547119,35547324	35545957,35546585,35546808,35547029,35547240,35547526	Gene ID= ENSG00000105677.11 TPM= 16.75 Transcript Type= protein_coding
chr19	35545674	35547526	35545674	35547526	+	ENST00000599895.1@TMEM147	ENST00000599895.1	protein_coding	35545674,35545888,35546526,35546672,35547324	35545816,35545957,35546585,35547240,35547526	Gene ID= ENSG00000105677.11 TPM= 8.07 Transcript Type= retained_intron
chr19	35545640	35547522	35545640	35547522	+	ENST00000477168.6@TMEM147	ENST00000477168.6	protein_coding	35545640,35545888,35546526,35546672,35547119,35547324	35545816,35545957,35546585,35547029,35547240,35547522	Gene ID= ENSG00000105677.11 TPM= 9.85 Transcript Type= retained_intron
chr19	35629023	35637686	35629023	35637686	+	transcript3604.chr19.nnic@RBM42	transcript3604.chr19.nnic	protein_coding	35629023,35629520,35631140,35631331,35632936,35633098,35633687,35634256,35637158,35637442	35629281,35629673,35631224,35631405,35633001,35633252,35634019,35634373,35637352,35637686	Gene ID= ENSG00000126254.11 TPM= 17.79 Transcript Type= NA
chr19	35629030	35637686	35629030	35637686	+	ENST00000588161.5@RBM42	ENST00000588161.5	protein_coding	35629030,35629520,35631140,35631331,35633101,35633687,35634256,35637158,35637442	35629281,35629673,35631224,35631405,35633252,35634019,35634373,35637352,35637686	Gene ID= ENSG00000126254.11 TPM= 115.51 Transcript Type= protein_coding
chr19	35629049	35637686	35629049	35637686	+	ENST00000262633.8@RBM42	ENST00000262633.8	protein_coding	35629049,35629520,35631140,35631331,35632936,35633077,35633687,35634256,35637158,35637442	35629281,35629673,35631224,35631405,35633001,35633252,35634019,35634373,35637352,35637686	Gene ID= ENSG00000126254.11 TPM= 69.84 Transcript Type= protein_coding
chr19	35648223	35658861	35648223	35658861	+	ENST00000246554.7@COX6B1	ENST00000246554.7	protein_coding	35648223,35651233,35654571,35658594	35648403,35651349,35654671,35658861	Gene ID= ENSG00000126267.8 TPM= 626.67 Transcript Type= protein_coding
chr19	35718019	35738878	35718019	35738878	+	ENST00000420124.2@KMT2B	ENST00000420124.2	protein_coding	35718019,35719469,35719784,35722359,35722568,35722995,35723447,35723732,35724637,35724989,35725220,35725479,35725723,35726236,35727156,35727438,35727698,35727881,35728098,35728774,35728985,35729159,35729967,35730342,35730538,35730707,35731908,35732215,35733597,35733763,35736690,35736912,35737086,35737636,35737859,35738062,35738282	35718381,35719541,35721804,35722472,35722718,35723274,35723502,35724007,35724731,35725087,35725333,35725625,35725818,35726353,35727269,35727622,35727787,35727985,35728171,35728889,35729076,35729296,35730125,35730462,35730616,35730867,35732135,35733508,35733686,35733872,35736827,35736986,35737263,35737743,35737942,35738191,35738878	Gene ID= ENSG00000272333.5 TPM= 21.77 Transcript Type= protein_coding
chr19	35734892	35738878	35734892	35738878	+	transcript3626.chr19.nic@KMT2B	transcript3626.chr19.nic	protein_coding	35734892,35736912,35737086,35737636,35737859,35738062,35738282	35736827,35736986,35737263,35737743,35737942,35738191,35738878	Gene ID= ENSG00000272333.5 TPM= 7.97 Transcript Type= NA
chr19	35739242	35740609	35739242	35740609	-	transcript3651.chr19.nnic@IGFLR1	transcript3651.chr19.nnic	protein_coding	35740380,35739242	35740609,35739626	Gene ID= ENSG00000126246.9 TPM= 5.31 Transcript Type= NA
chr19	35739157	35741335	35739157	35741335	-	ENST00000592889.1@IGFLR1	ENST00000592889.1	protein_coding	35741024,35739157	35741335,35739626	Gene ID= ENSG00000126246.9 TPM= 1.06 Transcript Type= protein_coding
chr19	35742531	35745429	35742531	35745429	-	transcript3628.chr19.nnic@U2AF1L4	transcript3628.chr19.nnic	protein_coding	35745348,35745125,35744323,35744070,35743809,35743155,35742531	35745429,35745187,35744421,35744145,35743904,35743208,35742803	Gene ID= ENSG00000161265.14 TPM= 2.12 Transcript Type= NA
chr19	35742531	35745429	35742531	35745429	-	transcript3630.chr19.nic@U2AF1L4	transcript3630.chr19.nic	protein_coding	35745348,35745125,35744626,35744323,35744070,35743809,35742531	35745429,35745187,35744738,35744421,35744145,35743904,35742803	Gene ID= ENSG00000161265.14 TPM= 3.19 Transcript Type= NA
chr19	35742532	35745445	35742532	35745445	-	ENST00000292879.9@U2AF1L4	ENST00000292879.9	protein_coding	35745348,35745125,35744323,35744070,35743809,35742532	35745445,35745212,35744421,35744145,35743904,35742803	Gene ID= ENSG00000161265.14 TPM= 8.5 Transcript Type= protein_coding
chr19	35742529	35745397	35742529	35745397	-	ENST00000585554.5@U2AF1L4	ENST00000585554.5	protein_coding	35745348,35745125,35744323,35744070,35743809,35742529	35745397,35745212,35744981,35744145,35743904,35742803	Gene ID= ENSG00000161265.14 TPM= 2.12 Transcript Type= retained_intron
chr19	35742532	35745405	35742532	35745405	-	ENST00000378975.7@U2AF1L4	ENST00000378975.7	protein_coding	35745348,35745125,35744323,35744012,35743809,35742532	35745405,35745212,35744421,35744145,35743904,35742803	Gene ID= ENSG00000161265.14 TPM= 2.12 Transcript Type= protein_coding
chr19	35745114	35747519	35745114	35747519	+	ENST00000587708.6@PSENEN	ENST00000587708.6	protein_coding	35745114,35745835,35746419,35746708	35745700,35745991,35746523,35747519	Gene ID= ENSG00000205155.7 TPM= 28.68 Transcript Type= protein_coding
chr19	35748361	35754519	35748361	35754519	+	ENST00000301159.13@LIN37	ENST00000301159.13	protein_coding	35748361,35752176,35752434,35752804,35752914,35753087,35754017,35754246,35754393	35748758,35752251,35752484,35752833,35752999,35753253,35754157,35754319,35754519	Gene ID= ENSG00000267796.7 TPM= 6.37 Transcript Type= protein_coding
chr19	35754569	35757029	35754569	35757029	-	ENST00000004982.5@HSPB6	ENST00000004982.5	protein_coding	35756811,35755772,35754569	35757029,35755894,35755683	Gene ID= ENSG00000004776.12 TPM= 705.27 Transcript Type= protein_coding
chr19	35868445	35879788	35868445	35879788	+	ENST00000221891.8@APLP1	ENST00000221891.8	protein_coding	35868445,35869667,35870896,35871237,35871612,35871858,35872483,35873639,35874504,35874741,35876517,35877718,35878082,35878584,35878890,35879074,35879343	35868783,35869810,35871028,35871349,35871745,35872036,35872613,35873713,35874662,35874869,35876616,35877825,35878108,35878654,35878952,35879217,35879788	Gene ID= ENSG00000105290.11 TPM= 32.93 Transcript Type= protein_coding
chr19	35868501	35879788	35868501	35879788	+	transcript3680.chr19.nic@APLP1	transcript3680.chr19.nic	protein_coding	35868501,35869667,35870896,35871237,35871612,35871858,35872483,35873639,35874741,35876517,35877718,35878085,35878584,35878890,35879074,35879343	35868783,35869810,35871028,35871349,35871745,35872036,35872613,35873713,35874869,35876616,35877825,35878108,35878654,35878952,35879217,35879788	Gene ID= ENSG00000105290.11 TPM= 23.37 Transcript Type= NA
chr19	35902480	35904377	35902480	35904377	+	ENST00000246551.8@HCST	ENST00000246551.8	protein_coding	35902480,35903351,35903772,35904120	35902636,35903416,35903903,35904377	Gene ID= ENSG00000126264.9 TPM= 1.06 Transcript Type= protein_coding
chr19	35902538	35904270	35902538	35904270	+	ENST00000437550.2@HCST	ENST00000437550.2	protein_coding	35902538,35903351,35903772,35904123	35902636,35903416,35903903,35904270	Gene ID= ENSG00000126264.9 TPM= 1.06 Transcript Type= protein_coding
chr19	35995199	35996315	35995199	35996315	+	ENST00000378887.3@SDHAF1	ENST00000378887.3	protein_coding	35995199	35996315	Gene ID= ENSG00000205138.3 TPM= 31.86 Transcript Type= protein_coding
chr19	36009122	36014269	36009122	36014269	-	transcript3693.chr19.nic@ALKBH6	transcript3693.chr19.nic	protein_coding	36014175,36013344,36013021,36011404,36010894,36010567,36009122	36014269,36013422,36013089,36011464,36011045,36010645,36009553	Gene ID= ENSG00000239382.10 TPM= 3.19 Transcript Type= NA
chr19	36009122	36014214	36009122	36014214	-	transcript3695.chr19.nic@ALKBH6	transcript3695.chr19.nic	protein_coding	36014175,36013021,36011404,36010894,36010567,36009122	36014214,36013089,36011464,36011045,36010645,36009553	Gene ID= ENSG00000239382.10 TPM= 2.12 Transcript Type= NA
chr19	36009124	36014239	36009124	36014239	-	ENST00000378875.7@ALKBH6	ENST00000378875.7	protein_coding	36014175,36013344,36013021,36011404,36010894,36010567,36009124	36014239,36013422,36013089,36011464,36011045,36010683,36009553	Gene ID= ENSG00000239382.10 TPM= 8.5 Transcript Type= protein_coding
chr19	36009121	36014183	36009121	36014183	-	ENST00000490483.5@ALKBH6	ENST00000490483.5	protein_coding	36014175,36013021,36011404,36010894,36010567,36009121	36014183,36013089,36011464,36011065,36010683,36009553	Gene ID= ENSG00000239382.10 TPM= 3.19 Transcript Type= nonsense_mediated_decay
chr19	36014660	36032893	36014660	36032893	-	ENST00000360535.8@CLIP3	ENST00000360535.8	protein_coding	36032724,36032192,36027132,36026952,36026586,36026147,36024396,36019171,36018898,36017848,36017655,36017386,36016907,36014660	36032893,36032415,36027271,36027045,36026747,36026265,36024632,36019306,36019026,36017991,36017778,36017450,36016979,36016212	Gene ID= ENSG00000105270.14 TPM= 2.12 Transcript Type= protein_coding
chr19	36034985	36054762	36034985	36054762	-	ENST00000292894.1@THAP8	ENST00000292894.1	protein_coding	36054135,36039944,36039323,36034985	36054762,36040136,36039718,36035592	Gene ID= ENSG00000161277.10 TPM= 9.56 Transcript Type= protein_coding
chr19	36034985	36054426	36034985	36054426	-	transcript3705.chr19.nic@THAP8	transcript3705.chr19.nic	protein_coding	36054349,36039944,36039323,36034985	36054426,36040136,36039718,36035592	Gene ID= ENSG00000161277.10 TPM= 6.37 Transcript Type= NA
chr19	36054937	36105103	36054937	36105103	+	ENST00000401500.6@WDR62	ENST00000401500.6	protein_coding	36054937,36058780,36059968,36065958,36066257,36067306,36067828,36071556,36073342,36081433,36083063,36084653,36086687,36089038,36089185,36090445,36091200,36091402,36092689,36094031,36097027,36099399,36100748,36101214,36101664,36102014,36102737,36102948,36103156,36103343,36104518,36104768	36055148,36058871,36060030,36066015,36066427,36067443,36068010,36071716,36073531,36081570,36083241,36084744,36086812,36089105,36089306,36090520,36091311,36091465,36092811,36094164,36097079,36099617,36100875,36101317,36101774,36102151,36102851,36103074,36103207,36103981,36104675,36105103	Gene ID= ENSG00000075702.16 TPM= 9.06 Transcript Type= protein_coding
chr19	36100598	36105103	36100598	36105103	+	transcript3715.chr19.nic@WDR62	transcript3715.chr19.nic	protein_coding	36100598,36101214,36101664,36102014,36102737,36102948,36103156,36103343,36104518,36104768	36100875,36101317,36101774,36102151,36102851,36103074,36103207,36103981,36104675,36105103	Gene ID= ENSG00000075702.16 TPM= 27.65 Transcript Type= NA
chr19	36100598	36105103	36100598	36105103	+	transcript3717.chr19.nnic@WDR62	transcript3717.chr19.nnic	protein_coding	36100598,36101214,36101664,36102014,36102737,36102948,36103156,36103343,36104518,36104768	36100875,36101317,36101774,36102248,36102851,36103074,36103207,36103981,36104675,36105103	Gene ID= ENSG00000075702.16 TPM= 17.03 Transcript Type= NA
chr19	36113710	36115346	36113710	36115346	-	ENST00000221859.8@POLR2I	ENST00000221859.8	protein_coding	36114798,36114659,36114339,36114177,36114015,36113710	36115346,36114713,36114412,36114251,36114066,36113817	Gene ID= ENSG00000105258.8 TPM= 88.16 Transcript Type= protein_coding
chr19	36113710	36114891	36113710	36114891	-	ENST00000589591.5@POLR2I	ENST00000589591.5	protein_coding	36114659,36114339,36114177,36114015,36113710	36114891,36114412,36114251,36114066,36113817	Gene ID= ENSG00000105258.8 TPM= 10.09 Transcript Type= retained_intron
chr19	36113714	36114860	36113714	36114860	-	ENST00000585842.5@POLR2I	ENST00000585842.5	protein_coding	36114798,36114339,36114177,36114015,36113714	36114860,36114412,36114251,36114066,36113817	Gene ID= ENSG00000105258.8 TPM= 11.15 Transcript Type= nonsense_mediated_decay
chr19	36115438	36125945	36115438	36125945	+	transcript3725.chr19.nnic@TBCB	transcript3725.chr19.nnic	protein_coding	36115438,36116041,36120710,36121527,36124250,36125451,36125668	36115674,36116184,36120806,36121718,36124363,36125523,36125945	Gene ID= ENSG00000105254.11 TPM= 16.99 Transcript Type= NA
chr19	36114986	36125945	36114986	36125945	+	ENST00000221855.7@TBCB	ENST00000221855.7	protein_coding	36114986,36116041,36120710,36121527,36125451,36125668	36115674,36116184,36120806,36121718,36125523,36125945	Gene ID= ENSG00000105254.11 TPM= 193.31 Transcript Type= protein_coding
chr19	36139575	36150352	36139575	36150352	+	ENST00000246533.7@CAPNS1	ENST00000246533.7	protein_coding	36139575,36140997,36142300,36142652,36142909,36143064,36145806,36145976,36146196,36149578,36149813	36140157,36141220,36142333,36142741,36142966,36143128,36145874,36146054,36146312,36149636,36150352	Gene ID= ENSG00000126247.10 TPM= 308.56 Transcript Type= protein_coding
chr19	36140127	36150352	36140127	36150352	+	ENST00000588815.5@CAPNS1	ENST00000588815.5	protein_coding	36140127,36141000,36142300,36142652,36142909,36143064,36145806,36145976,36146196,36149578,36149813	36140265,36141220,36142333,36142741,36142966,36143128,36145874,36146054,36146312,36149636,36150352	Gene ID= ENSG00000126247.10 TPM= 92.94 Transcript Type= protein_coding
chr19	36150922	36152869	36150922	36152869	-	ENST00000292907.7@COX7A1	ENST00000292907.7	protein_coding	36152393,36151669,36151462,36150922	36152869,36151755,36151546,36151034	Gene ID= ENSG00000161281.10 TPM= 2446.95 Transcript Type= protein_coding
chr19	36150922	36152446	36150922	36152446	-	transcript3741.chr19.nnic@COX7A1	transcript3741.chr19.nnic	protein_coding	36152393,36151462,36150922	36152446,36151546,36151034	Gene ID= ENSG00000161281.10 TPM= 163.31 Transcript Type= NA
chr19	36150922	36152449	36150922	36152449	-	ENST00000481297.1@COX7A1	ENST00000481297.1	protein_coding	36152393,36151462,36150922	36152449,36151755,36151034	Gene ID= ENSG00000161281.10 TPM= 301.39 Transcript Type= retained_intron
chr19	36151013	36152436	36151013	36152436	-	ENST00000589154.1@COX7A1	ENST00000589154.1	protein_coding	36152393,36151696,36151462,36151013	36152436,36151755,36151546,36151034	Gene ID= ENSG00000161281.10 TPM= 2.12 Transcript Type= protein_coding
chr19	36151450	36166923	36151450	36166923	+	transcript3739.chr19.nnic@NA	transcript3739.chr19.nnic	NA	36151450,36161531,36166425	36151522,36161655,36166923	Gene ID= novel_gene_chr19_3740 TPM= 2.12 Transcript Type= NA
chr19	36151450	36166923	36151450	36166923	+	transcript3749.chr19.nnic@NA	transcript3749.chr19.nnic	NA	36151450,36161531,36166425	36151522,36161655,36166923	Gene ID= novel_gene_chr19_3750 TPM= 2.12 Transcript Type= NA
chr19	36215106	36238771	36215106	36238771	+	transcript3746.chr19.nnic@ZNF146	transcript3746.chr19.nnic	protein_coding	36215106,36218122,36228748,36235659	36215155,36218195,36228819,36238771	Gene ID= ENSG00000167635.11 TPM= 6.37 Transcript Type= NA
chr19	36214602	36238771	36214602	36238771	+	ENST00000456324.5@ZNF146	ENST00000456324.5	protein_coding	36214602,36228748,36235659	36215196,36228819,36238771	Gene ID= ENSG00000167635.11 TPM= 16.99 Transcript Type= protein_coding
chr19	36215133	36238774	36215133	36238774	+	ENST00000443387.2@ZNF146	ENST00000443387.2	protein_coding	36215133,36218122,36228748,36235659	36215196,36218195,36228819,36238774	Gene ID= ENSG00000167635.11 TPM= 35.05 Transcript Type= protein_coding
chr19	36311544	36312668	36311544	36312668	+	ENST00000593173.1@AC012617.1	ENST00000593173.1	lincRNA	36311544,36312522	36311792,36312668	Gene ID= ENSG00000267053.6 TPM= 2.12 Transcript Type= lincRNA
chr19	36324906	36331756	36324906	36331756	-	transcript3762.chr19.nnic@LINC00665	transcript3762.chr19.nnic	lincRNA	36331447,36330253,36324906	36331756,36330492,36325764	Gene ID= ENSG00000232677.6 TPM= 4.25 Transcript Type= NA
chr19	36334453	36379199	36334453	36379199	-	ENST00000270001.11@ZFP14	ENST00000270001.11	protein_coding	36379163,36367884,36362112,36360435,36334453	36379199,36367971,36362238,36360533,36341590	Gene ID= ENSG00000142065.13 TPM= 1.06 Transcript Type= protein_coding
chr19	36391960	36418656	36391960	36418656	-	ENST00000392161.3@ZFP82	ENST00000392161.3	protein_coding	36418492,36409781,36407887,36405580,36391960	36418656,36409867,36408013,36405672,36394110	Gene ID= ENSG00000181007.8 TPM= 12.75 Transcript Type= protein_coding
chr19	36447629	36489561	36447629	36489561	-	ENST00000392170.6@ZNF566	ENST00000392170.6	protein_coding	36489474,36476549,36473332,36472911,36447629	36489561,36476616,36473458,36473009,36450001	Gene ID= ENSG00000186017.14 TPM= 2.12 Transcript Type= protein_coding
chr19	36447021	36489861	36447021	36489861	-	ENST00000493391.5@ZNF566	ENST00000493391.5	protein_coding	36489486,36476549,36447021	36489861,36476616,36450001	Gene ID= ENSG00000186017.14 TPM= 4.25 Transcript Type= protein_coding
chr19	36510695	36528660	36510695	36528660	-	ENST00000523638.5@ZNF260	ENST00000523638.5	protein_coding	36528219,36525155,36510695	36528660,36525373,36515699	Gene ID= ENSG00000254004.6 TPM= 4.25 Transcript Type= protein_coding
chr19	36543616	36573288	36543616	36573288	-	ENST00000334116.7@ZNF529	ENST00000334116.7	protein_coding	36573140,36572333,36556104,36554670,36551877,36543616	36573288,36572392,36556197,36554796,36551977,36548322	Gene ID= ENSG00000186020.12 TPM= 2.12 Transcript Type= protein_coding
chr19	36580255	36605262	36580255	36605262	-	ENST00000586458.5@ZNF529	ENST00000586458.5	protein_coding	36605126,36589615,36580255	36605262,36589701,36582704	Gene ID= ENSG00000186020.12 TPM= 1.06 Transcript Type= processed_transcript
chr19	36544386	36573252	36544386	36573252	-	ENST00000591340.5@ZNF529	ENST00000591340.5	protein_coding	36573140,36572333,36556104,36554670,36544386	36573252,36572392,36556197,36554796,36548322	Gene ID= ENSG00000186020.12 TPM= 5.31 Transcript Type= protein_coding
chr19	36573070	36594708	36573070	36594708	+	ENST00000475219.6@ZNF529-AS1	ENST00000475219.6	antisense_RNA	36573070,36574821,36593846,36594156,36594442	36573525,36574900,36593931,36594299,36594708	Gene ID= ENSG00000233527.8 TPM= 2.12 Transcript Type= antisense_RNA
chr19	36584245	36587281	36584245	36587281	+	transcript3792.chr19.nnic@NA	transcript3792.chr19.nnic	NA	36584245	36587281	Gene ID= novel_gene_chr19_3793 TPM= 6.37 Transcript Type= NA
chr19	36605313	36628270	36605313	36628270	+	transcript3795.chr19.nic@ZNF382	transcript3795.chr19.nic	protein_coding	36605313,36607552,36609902,36610650,36626130	36605730,36607622,36610053,36610742,36628270	Gene ID= ENSG00000161298.17 TPM= 2.12 Transcript Type= NA
chr19	36689400	36721326	36689400	36721326	+	ENST00000360729.8@ZNF567	ENST00000360729.8	protein_coding	36689400,36712386,36712781,36718948	36689497,36712512,36712867,36721326	Gene ID= ENSG00000189042.13 TPM= 1.06 Transcript Type= protein_coding
chr19	36817428	36838384	36817428	36838384	-	ENST00000356725.8@ZNF790	ENST00000356725.8	protein_coding	36838337,36825611,36823667,36823285,36817428	36838384,36825692,36823790,36823380,36820114	Gene ID= ENSG00000197863.8 TPM= 3.19 Transcript Type= protein_coding
chr19	36818322	36850787	36818322	36850787	-	ENST00000613249.4@ZNF790	ENST00000613249.4	protein_coding	36850700,36825611,36823667,36823285,36818322	36850787,36825692,36823790,36823380,36820114	Gene ID= ENSG00000197863.8 TPM= 1.06 Transcript Type= protein_coding
chr19	36868631	36870449	36868631	36870449	-	transcript3816.chr19.nnic@NA	transcript3816.chr19.nnic	NA	36868631	36870449	Gene ID= novel_gene_chr19_3817 TPM= 2.12 Transcript Type= NA
chr19	37078246	37130319	37078246	37130319	+	transcript3825.chr19.nnic@ZNF420	transcript3825.chr19.nnic	protein_coding	37078246,37080345,37089039,37090995,37096031,37127128	37078570,37080388,37089127,37091121,37096115,37130319	Gene ID= ENSG00000197050.10 TPM= 3.19 Transcript Type= NA
chr19	37078480	37130311	37078480	37130311	+	ENST00000337995.3@ZNF420	ENST00000337995.3	protein_coding	37078480,37080345,37089039,37090995,37127128	37078570,37080388,37089127,37091121,37130311	Gene ID= ENSG00000197050.10 TPM= 3.19 Transcript Type= protein_coding
chr19	37147438	37172741	37147438	37172741	-	ENST00000356958.8@ZNF585A	ENST00000356958.8	protein_coding	37172627,37169839,37165595,37156229,37155865,37147438	37172741,37170054,37165696,37156355,37155957,37153606	Gene ID= ENSG00000196967.10 TPM= 1.06 Transcript Type= protein_coding
chr19	37145540	37172741	37145540	37172741	-	ENST00000292841.9@ZNF585A	ENST00000292841.9	protein_coding	37172627,37169839,37156229,37155865,37145540	37172741,37170054,37156355,37155957,37153606	Gene ID= ENSG00000196967.10 TPM= 1.06 Transcript Type= protein_coding
chr19	37165385	37172694	37165385	37172694	-	ENST00000588354.1@ZNF585A	ENST00000588354.1	protein_coding	37172627,37169839,37165385	37172694,37170054,37165696	Gene ID= ENSG00000196967.10 TPM= 5.31 Transcript Type= protein_coding
chr19	37225959	37227270	37225959	37227270	-	transcript3837.chr19.nnic@NA	transcript3837.chr19.nnic	NA	37225959	37227270	Gene ID= novel_gene_chr19_3838 TPM= 4.25 Transcript Type= NA
chr19	37251881	37265535	37251881	37265535	+	transcript3842.chr19.nic@LINC01535	transcript3842.chr19.nic	lincRNA	37251881,37255899,37256399,37256727,37257231,37265286	37252182,37255982,37256519,37256814,37257394,37265535	Gene ID= ENSG00000226686.7 TPM= 2.12 Transcript Type= NA
chr19	37251881	37263484	37251881	37263484	+	transcript3845.chr19.nnic@LINC01535	transcript3845.chr19.nnic	lincRNA	37251881,37255899,37262355,37262542,37263084	37252182,37255982,37262434,37262655,37263484	Gene ID= ENSG00000226686.7 TPM= 4.25 Transcript Type= NA
chr19	37251881	37263484	37251881	37263484	+	transcript3848.chr19.nic@LINC01535	transcript3848.chr19.nic	lincRNA	37251881,37255899,37262542,37263084	37252182,37255982,37262655,37263484	Gene ID= ENSG00000226686.7 TPM= 2.12 Transcript Type= NA
chr19	37251881	37265541	37251881	37265541	+	transcript3850.chr19.nic@LINC01535	transcript3850.chr19.nic	lincRNA	37251881,37255899,37262542,37265286	37252182,37255982,37262655,37265541	Gene ID= ENSG00000226686.7 TPM= 3.19 Transcript Type= NA
chr19	37304445	37309703	37304445	37309703	+	transcript3852.chr19.nnic@NA	transcript3852.chr19.nnic	NA	37304445	37309703	Gene ID= novel_gene_chr19_3853 TPM= 2.12 Transcript Type= NA
chr19	37311156	37311919	37311156	37311919	+	transcript3854.chr19.nnic@NA	transcript3854.chr19.nnic	NA	37311156	37311919	Gene ID= novel_gene_chr19_3855 TPM= 2.12 Transcript Type= NA
chr19	37334643	37364447	37334643	37364447	+	transcript3860.chr19.nic@HKR1	transcript3860.chr19.nic	protein_coding	37334643,37335169,37347190,37347777,37357962,37362106	37334782,37335257,37347316,37347872,37358039,37364447	Gene ID= ENSG00000181666.17 TPM= 6.9 Transcript Type= NA
chr19	37334666	37364451	37334666	37364451	+	ENST00000392153.7@HKR1	ENST00000392153.7	protein_coding	37334666,37335169,37347190,37347777,37362109	37334782,37335257,37347316,37347872,37364451	Gene ID= ENSG00000181666.17 TPM= 15.4 Transcript Type= protein_coding
chr19	37328002	37329702	37328002	37329702	+	transcript3871.chr19.nnic@NA	transcript3871.chr19.nnic	NA	37328002	37329702	Gene ID= novel_gene_chr19_3872 TPM= 2.12 Transcript Type= NA
chr19	37336851	37339710	37336851	37339710	-	transcript3875.chr19.nnic@NA	transcript3875.chr19.nnic	NA	37336851	37339710	Gene ID= novel_gene_chr19_3876 TPM= 4.25 Transcript Type= NA
chr19	37371161	37390770	37371161	37390770	+	ENST00000436120.6@ZNF527	ENST00000436120.6	protein_coding	37371161,37374158,37379120,37380277,37388306	37371226,37374231,37379246,37380372,37390770	Gene ID= ENSG00000189164.14 TPM= 3.19 Transcript Type= protein_coding
chr19	37371159	37385644	37371159	37385644	+	ENST00000483919.5@ZNF527	ENST00000483919.5	protein_coding	37371159,37374158,37379120,37380277,37384868	37371226,37374231,37379246,37380372,37385644	Gene ID= ENSG00000189164.14 TPM= 1.06 Transcript Type= protein_coding
chr19	37411155	37467229	37411155	37467229	-	transcript3884.chr19.nic@ZNF569	transcript3884.chr19.nic	protein_coding	37467084,37466739,37465313,37444907,37426252,37425868,37411155	37467229,37466804,37465473,37444964,37426378,37425963,37414419	Gene ID= ENSG00000196437.10 TPM= 2.12 Transcript Type= NA
chr19	37411155	37467437	37411155	37467437	-	ENST00000316950.10@ZNF569	ENST00000316950.10	protein_coding	37467084,37465313,37444907,37426252,37425868,37411155	37467437,37465473,37444964,37426378,37425963,37414419	Gene ID= ENSG00000196437.10 TPM= 2.12 Transcript Type= protein_coding
chr19	37547647	37551315	37547647	37551315	-	transcript3907.chr19.nnic@NA	transcript3907.chr19.nnic	NA	37547647	37551315	Gene ID= novel_gene_chr19_3908 TPM= 7.44 Transcript Type= NA
chr19	37551371	37587348	37551371	37587348	+	ENST00000590838.5@ZNF571-AS1	ENST00000590838.5	antisense_RNA	37551371,37566031,37569850,37585339	37551665,37566089,37569996,37587348	Gene ID= ENSG00000267470.5 TPM= 1.06 Transcript Type= antisense_RNA
chr19	37594830	37613387	37594830	37613387	+	ENST00000589117.5@ZNF540	ENST00000589117.5	protein_coding	37594830,37598376,37599626,37611513	37595095,37598456,37599752,37613387	Gene ID= ENSG00000171817.16 TPM= 1.06 Transcript Type= protein_coding
chr19	37594905	37611577	37594905	37611577	+	ENST00000590588.5@ZNF540	ENST00000590588.5	protein_coding	37594905,37598376,37599626,37601007,37611513	37595095,37598456,37599752,37601105,37611577	Gene ID= ENSG00000171817.16 TPM= 1.06 Transcript Type= protein_coding
chr19	37667751	37692322	37667751	37692322	-	ENST00000358582.8@ZNF781	ENST00000358582.8	protein_coding	37692152,37691521,37686451,37667751	37692322,37691618,37686522,37670556	Gene ID= ENSG00000196381.10 TPM= 1.06 Transcript Type= protein_coding
chr19	37696363	37719790	37696363	37719790	-	ENST00000355202.8@ZNF607	ENST00000355202.8	protein_coding	37719269,37711610,37709696,37707914,37696363	37719790,37711692,37709822,37708012,37699895	Gene ID= ENSG00000198182.12 TPM= 5.31 Transcript Type= protein_coding
chr19	37738302	37779590	37738302	37779590	-	ENST00000536220.5@ZNF573	ENST00000536220.5	protein_coding	37779544,37773661,37771564,37770005,37738302	37779590,37773751,37771696,37770097,37740194	Gene ID= ENSG00000189144.13 TPM= 2.12 Transcript Type= protein_coding
chr19	38173613	38174845	38173613	38174845	+	transcript3929.chr19.nnic@NA	transcript3929.chr19.nnic	NA	38173613	38174845	Gene ID= novel_gene_chr19_3930 TPM= 2.12 Transcript Type= NA
chr19	38211009	38224250	38211009	38224250	-	ENST00000614244.4@DPF1	ENST00000614244.4	protein_coding	38224114,38222548,38222357,38218931,38218573,38217798,38217460,38216353,38216140,38213644,38212280,38211009	38224250,38222708,38222464,38219058,38218662,38217876,38217591,38216403,38216259,38213756,38212391,38212133	Gene ID= ENSG00000011332.19 TPM= 1.06 Transcript Type= protein_coding
chr19	38251237	38256591	38251237	38256591	-	ENST00000301242.8@PPP1R14A	ENST00000301242.8	protein_coding	38256139,38252894,38252306,38251237	38256591,38252974,38252338,38251446	Gene ID= ENSG00000167641.10 TPM= 35.05 Transcript Type= protein_coding
chr19	38251237	38253257	38251237	38253257	-	ENST00000587515.5@PPP1R14A	ENST00000587515.5	protein_coding	38252894,38252306,38251237	38253257,38252338,38251446	Gene ID= ENSG00000167641.10 TPM= 5.31 Transcript Type= protein_coding
chr19	38264458	38292614	38264458	38292614	+	ENST00000301244.11@SPINT2	ENST00000301244.11	protein_coding	38264458,38283627,38287876,38289138,38290119,38290537,38291840	38264998,38283797,38287935,38289191,38290280,38290575,38292614	Gene ID= ENSG00000167642.12 TPM= 1.06 Transcript Type= protein_coding
chr19	38304161	38305009	38304161	38305009	+	ENST00000301246.9@C19orf33	ENST00000301246.9	protein_coding	38304161,38304375,38304624,38304845	38304283,38304490,38304686,38305009	Gene ID= ENSG00000167644.11 TPM= 2.12 Transcript Type= protein_coding
chr19	38305115	38315873	38305115	38315873	-	transcript3941.chr19.nic@YIF1B	transcript3941.chr19.nic	protein_coding	38315723,38309405,38309224,38308979,38308792,38307597,38307428,38305115	38315873,38309643,38309328,38309057,38308849,38307752,38307521,38305507	Gene ID= ENSG00000167645.16 TPM= 6.64 Transcript Type= NA
chr19	38305115	38321885	38305115	38321885	-	transcript3944.chr19.nnic@YIF1B	transcript3944.chr19.nnic	protein_coding	38321828,38309405,38309224,38308979,38308792,38307597,38307428,38305115	38321885,38309643,38309328,38309057,38308849,38307752,38307521,38305507	Gene ID= ENSG00000167645.16 TPM= 6.64 Transcript Type= NA
chr19	38305114	38315923	38305114	38315923	-	ENST00000337679.12@YIF1B	ENST00000337679.12	protein_coding	38315869,38309405,38309224,38308979,38308792,38307597,38307428,38306914,38305114	38315923,38309643,38309328,38309057,38308849,38307752,38307521,38306990,38305507	Gene ID= ENSG00000167645.16 TPM= 3.98 Transcript Type= protein_coding
chr19	38305118	38315963	38305118	38315963	-	ENST00000339413.10@YIF1B	ENST00000339413.10	protein_coding	38315860,38309405,38309224,38308979,38308792,38307597,38307428,38305118	38315963,38309643,38309328,38309057,38308849,38307752,38307521,38305507	Gene ID= ENSG00000167645.16 TPM= 11.42 Transcript Type= protein_coding
chr19	38319844	38332076	38319844	38332076	+	ENST00000263372.4@KCNK6	ENST00000263372.4	protein_coding	38319844,38326593,38327180	38320272,38326988,38332076	Gene ID= ENSG00000099337.4 TPM= 9.56 Transcript Type= protein_coding
chr19	38374536	38383824	38374536	38383824	+	ENST00000215071.8@PSMD8	ENST00000215071.8	protein_coding	38374536,38376160,38376352,38379240,38380899,38382117,38383253	38374961,38376232,38376454,38379405,38380999,38382228,38383824	Gene ID= ENSG00000099341.11 TPM= 176.85 Transcript Type= protein_coding
chr19	38403115	38409083	38403115	38409083	+	transcript3958.chr19.nnic@FAM98C	transcript3958.chr19.nnic	protein_coding	38403115,38403338,38403560,38404908,38405344,38405519,38406910,38408669	38403218,38403486,38403694,38405113,38405421,38405635,38407077,38409083	Gene ID= ENSG00000130244.12 TPM= 9.03 Transcript Type= NA
chr19	38403135	38409084	38403135	38409084	+	ENST00000252530.9@FAM98C	ENST00000252530.9	protein_coding	38403135,38403338,38403560,38404908,38405344,38405519,38406910,38408751	38403218,38403486,38403694,38405113,38405421,38405635,38407077,38409084	Gene ID= ENSG00000130244.12 TPM= 20.71 Transcript Type= protein_coding
chr19	38433699	38587564	38433699	38587564	+	ENST00000355481.8@RYR1	ENST00000355481.8	protein_coding	38433699,38440745,38442349,38443558,38443718,38444149,38444584,38446472,38446694,38448355,38448649,38451764,38452819,38455235,38455451,38455633,38457497,38458051,38459146,38460375,38463423,38463747,38464639,38466091,38467610,38468966,38469305,38473377,38475318,38477710,38478435,38483027,38483290,38485590,38489177,38490076,38490621,38492490,38494352,38496215,38496409,38496860,38499108,38499635,38499908,38500606,38500821,38502507,38502880,38504220,38504748,38505003,38505309,38505806,38506303,38506471,38506829,38507712,38510498,38510660,38511561,38512072,38512245,38515026,38516087,38517359,38519214,38523028,38523217,38525332,38526993,38527647,38528306,38528599,38528951,38532490,38532671,38534720,38535141,38535316,38535997,38536750,38537880,38543347,38543532,38543771,38546445,38548233,38561113,38564959,38566911,38567773,38570607,38572019,38573177,38575919,38577918,38578144,38579982,38580370,38584943,38585938,38586091,38586525,38587325	38433874,38440864,38442453,38443632,38443796,38444261,38444677,38446565,38446768,38448511,38448813,38451885,38453014,38455370,38455546,38455751,38457630,38458292,38459338,38460591,38463527,38463850,38464722,38466398,38467812,38469140,38469513,38473771,38475450,38477870,38478600,38483113,38483516,38486202,38489443,38490276,38490732,38492636,38494625,38496329,38496541,38496954,38499243,38499821,38500016,38500726,38500990,38502727,38502970,38504360,38504911,38505081,38505398,38505946,38506377,38506546,38506952,38507827,38510565,38510781,38511610,38512132,38512483,38515107,38516217,38517691,38519454,38523115,38523309,38525502,38527052,38527784,38528418,38528695,38529057,38532541,38532736,38534819,38535220,38535392,38536070,38536767,38537960,38543435,38543660,38543875,38546526,38548420,38561454,38565771,38566987,38567917,38570693,38572270,38573307,38575961,38578048,38578204,38580128,38580504,38585099,38586002,38586191,38586576,38587564	Gene ID= ENSG00000196218.12 TPM= 1.06 Transcript Type= protein_coding
chr19	38619097	38636955	38619097	38636955	+	ENST00000248342.8@EIF3K	ENST00000248342.8	protein_coding	38619097,38620337,38624077,38626028,38632430,38632601,38634993,38636889	38619327,38620435,38624197,38626102,38632496,38632678,38635118,38636955	Gene ID= ENSG00000178982.9 TPM= 379.9 Transcript Type= protein_coding
chr19	38619082	38636955	38619082	38636955	+	ENST00000614624.4@EIF3K	ENST00000614624.4	protein_coding	38619082,38624077,38626028,38632430,38632601,38634993,38636889	38619327,38624197,38626102,38632496,38632678,38635118,38636955	Gene ID= ENSG00000178982.9 TPM= 77.19 Transcript Type= protein_coding
chr19	38619186	38636952	38619186	38636952	+	ENST00000588934.5@EIF3K	ENST00000588934.5	protein_coding	38619186,38620337,38624077,38626028,38636889	38619327,38620435,38624197,38626102,38636952	Gene ID= ENSG00000178982.9 TPM= 3.19 Transcript Type= protein_coding
chr19	38619211	38636953	38619211	38636953	+	ENST00000592558.1@EIF3K	ENST00000592558.1	protein_coding	38619211,38620337,38624077,38626028,38632430,38634993,38636889	38619327,38620435,38624197,38626102,38632496,38635118,38636953	Gene ID= ENSG00000178982.9 TPM= 81.44 Transcript Type= protein_coding
chr19	38627907	38630584	38627907	38630584	-	transcript4019.chr19.nnic@NA	transcript4019.chr19.nnic	NA	38627907	38630584	Gene ID= novel_gene_chr19_4020 TPM= 7.44 Transcript Type= NA
chr19	38634495	38637037	38634495	38637037	-	transcript4027.chr19.nnic@NA	transcript4027.chr19.nnic	NA	38634495	38637037	Gene ID= novel_gene_chr19_4028 TPM= 4.25 Transcript Type= NA
chr19	38659067	38664640	38659067	38664640	-	transcript4017.chr19.nnic@NA	transcript4017.chr19.nnic	NA	38659067	38664640	Gene ID= novel_gene_chr19_4018 TPM= 28.68 Transcript Type= NA
chr19	38695974	38699765	38695974	38699765	+	transcript4013.chr19.nnic@NA	transcript4013.chr19.nnic	NA	38695974	38699765	Gene ID= novel_gene_chr19_4014 TPM= 3.19 Transcript Type= NA
chr19	38729560	38730530	38729560	38730530	+	transcript4015.chr19.nnic@NA	transcript4015.chr19.nnic	NA	38729560	38730530	Gene ID= novel_gene_chr19_4016 TPM= 26.02 Transcript Type= NA
chr19	38730187	38735410	38730187	38735410	-	ENST00000594552.5@CAPN12	ENST00000594552.5	protein_coding	38735370,38734813,38733703,38731107,38730965,38730187	38735410,38734870,38733781,38731223,38731023,38730878	Gene ID= ENSG00000182472.8 TPM= 1.59 Transcript Type= nonsense_mediated_decay
chr19	38733121	38735672	38733121	38735672	-	ENST00000601685.1@CAPN12	ENST00000601685.1	protein_coding	38733121	38735672	Gene ID= ENSG00000182472.8 TPM= 7.44 Transcript Type= retained_intron
chr19	38815422	38832005	38815422	38832005	-	ENST00000221418.8@ECH1	ENST00000221418.8	protein_coding	38831721,38831309,38831078,38817451,38817316,38817065,38816453,38816284,38815857,38815422	38832005,38831516,38831166,38817575,38817364,38817129,38816523,38816355,38816007,38815717	Gene ID= ENSG00000104823.8 TPM= 735.81 Transcript Type= protein_coding
chr19	38836395	38849997	38836395	38849997	-	transcript4049.chr19.nic@HNRNPL	transcript4049.chr19.nic	protein_coding	38849700,38847316,38845853,38845650,38844008,38843842,38841613,38840488,38840096,38838894,38838397,38837594,38837384,38836395	38849997,38847434,38846090,38845735,38844104,38843914,38841682,38840559,38840376,38839015,38838598,38837651,38837479,38836780	Gene ID= ENSG00000104824.16 TPM= 15.4 Transcript Type= NA
chr19	38836388	38850333	38836388	38850333	-	ENST00000221419.9@HNRNPL	ENST00000221419.9	protein_coding	38849700,38847316,38845853,38845650,38844008,38843842,38840488,38840096,38838894,38838397,38837594,38837384,38836388	38850333,38847434,38846090,38845735,38844104,38843914,38840559,38840376,38839015,38838598,38837651,38837479,38836780	Gene ID= ENSG00000104824.16 TPM= 153.48 Transcript Type= protein_coding
chr19	38836395	38849940	38836395	38849940	-	transcript4052.chr19.nic@HNRNPL	transcript4052.chr19.nic	protein_coding	38849700,38847316,38845853,38845650,38844008,38843842,38840488,38840096,38838894,38838397,38837594,38837384,38836395	38849940,38847434,38846090,38845735,38844104,38843914,38841682,38840376,38839015,38838598,38837651,38837479,38836780	Gene ID= ENSG00000104824.16 TPM= 9.03 Transcript Type= NA
chr19	38836395	38849939	38836395	38849939	-	transcript4057.chr19.nic@HNRNPL	transcript4057.chr19.nic	protein_coding	38849700,38847316,38845853,38845650,38844008,38843842,38840096,38838894,38838397,38837594,38837384,38836395	38849939,38847434,38846090,38845735,38844104,38843914,38840559,38839015,38838598,38837651,38837479,38836780	Gene ID= ENSG00000104824.16 TPM= 16.46 Transcript Type= NA
chr19	38842106	38849997	38842106	38849997	-	transcript4061.chr19.nic@HNRNPL	transcript4061.chr19.nic	protein_coding	38849700,38847316,38845853,38845650,38844008,38842106	38849997,38847434,38846090,38845735,38844104,38843914	Gene ID= ENSG00000104824.16 TPM= 38.24 Transcript Type= NA
chr19	38836389	38839664	38836389	38839664	-	ENST00000595443.5@HNRNPL	ENST00000595443.5	protein_coding	38838894,38838397,38837594,38836389	38839664,38838598,38837651,38837479	Gene ID= ENSG00000104824.16 TPM= 7.44 Transcript Type= retained_intron
chr19	38878557	38899621	38878557	38899621	-	transcript4068.chr19.nic@SIRT2	transcript4068.chr19.nic	protein_coding	38899506,38898794,38898379,38893819,38893414,38890103,38889855,38889689,38889087,38883627,38881432,38881100,38880821,38880685,38879632,38879434,38878557	38899621,38898918,38898425,38893867,38893527,38890144,38889961,38889745,38889155,38883756,38881491,38881155,38880897,38880736,38879702,38879500,38879310	Gene ID= ENSG00000068903.19 TPM= 7.83 Transcript Type= NA
chr19	38878557	38899823	38878557	38899823	-	ENST00000249396.11@SIRT2	ENST00000249396.11	protein_coding	38899506,38898379,38893819,38893414,38890103,38889855,38889689,38889087,38883627,38881432,38881100,38880821,38880685,38879632,38879434,38878557	38899823,38898425,38893867,38893527,38890144,38889961,38889745,38889155,38883756,38881491,38881155,38880897,38880736,38879702,38879500,38879310	Gene ID= ENSG00000068903.19 TPM= 16.33 Transcript Type= protein_coding
chr19	38878557	38899621	38878557	38899621	-	transcript4072.chr19.nic@SIRT2	transcript4072.chr19.nic	protein_coding	38899506,38898794,38893819,38893414,38890103,38889855,38889689,38889087,38883627,38881432,38881100,38880821,38880685,38879632,38879434,38878557	38899621,38898918,38893867,38893527,38890144,38889961,38889745,38889155,38883756,38881491,38881155,38880897,38880736,38879702,38879500,38879310	Gene ID= ENSG00000068903.19 TPM= 6.77 Transcript Type= NA
chr19	38878557	38899862	38878557	38899862	-	ENST00000392081.6@SIRT2	ENST00000392081.6	protein_coding	38899506,38893819,38893414,38890103,38889855,38889689,38889087,38883627,38881432,38881100,38880821,38880685,38879632,38879434,38878557	38899862,38893867,38893527,38890144,38889961,38889745,38889155,38883756,38881491,38881155,38880897,38880736,38879702,38879500,38879310	Gene ID= ENSG00000068903.19 TPM= 63.06 Transcript Type= protein_coding
chr19	38878557	38899588	38878557	38899588	-	transcript4080.chr19.nic@SIRT2	transcript4080.chr19.nic	protein_coding	38899506,38893819,38893414,38890103,38889855,38889689,38889087,38883627,38881432,38881100,38880821,38880685,38879632,38879434,38878557	38899588,38893971,38893527,38890144,38889961,38889745,38889155,38883756,38881491,38881155,38880897,38880736,38879702,38879500,38879310	Gene ID= ENSG00000068903.19 TPM= 6.77 Transcript Type= NA
chr19	38878557	38899646	38878557	38899646	-	transcript4089.chr19.nnic@SIRT2	transcript4089.chr19.nnic	protein_coding	38899506,38890103,38889855,38889689,38889087,38883627,38881432,38881100,38880821,38880685,38879632,38879434,38878557	38899646,38890144,38889961,38889745,38889155,38883756,38881491,38881155,38880897,38880736,38879702,38879500,38879310	Gene ID= ENSG00000068903.19 TPM= 6.55 Transcript Type= NA
chr19	38899980	38908893	38899980	38908893	+	ENST00000509705.3@NFKBIB	ENST00000509705.3	protein_coding	38899980,38905071,38905202,38907221,38907399	38900211,38905120,38905535,38907309,38908893	Gene ID= ENSG00000104825.16 TPM= 4.25 Transcript Type= nonsense_mediated_decay
chr19	38899952	38908538	38899952	38908538	+	ENST00000572515.5@NFKBIB	ENST00000572515.5	protein_coding	38899952,38905015,38905202,38907221,38907399	38900211,38905120,38905535,38907309,38908538	Gene ID= ENSG00000104825.16 TPM= 19.12 Transcript Type= protein_coding
chr19	38899999	38908886	38899999	38908886	+	ENST00000313582.5@NFKBIB	ENST00000313582.5	protein_coding	38899999,38905015,38905202,38907221,38907399,38908731	38900211,38905120,38905535,38907309,38907659,38908886	Gene ID= ENSG00000104825.16 TPM= 13.81 Transcript Type= protein_coding
chr19	38915266	38930896	38915266	38930896	-	ENST00000221431.10@SARS2	ENST00000221431.10	protein_coding	38930470,38926205,38922238,38921527,38921392,38920086,38919762,38918766,38918422,38918094,38917921,38917724,38916221,38916037,38915841,38915266	38930896,38926300,38922267,38921667,38921446,38920149,38919867,38918813,38918530,38918139,38918008,38917833,38916314,38916129,38915906,38915749	Gene ID= ENSG00000104835.14 TPM= 20.18 Transcript Type= protein_coding
chr19	38930548	38933020	38930548	38933020	+	ENST00000308018.8@MRPS12	ENST00000308018.8	protein_coding	38930548,38931276,38932333	38930998,38931343,38933020	Gene ID= ENSG00000128626.11 TPM= 27.62 Transcript Type= protein_coding
chr19	38930954	38933162	38930954	38933162	+	ENST00000407800.2@MRPS12	ENST00000407800.2	protein_coding	38930954,38932333	38931343,38933162	Gene ID= ENSG00000128626.11 TPM= 3.19 Transcript Type= protein_coding
chr19	38930999	38933020	38930999	38933020	+	ENST00000402029.3@MRPS12	ENST00000402029.3	protein_coding	38930999,38931276,38932333	38931171,38931343,38933020	Gene ID= ENSG00000128626.11 TPM= 14.87 Transcript Type= protein_coding
chr19	38941401	38975910	38941401	38975910	-	ENST00000292852.8@FBXO17	ENST00000292852.8	protein_coding	38975586,38949971,38948567,38946472,38944969,38941401	38975910,38950336,38948678,38946567,38945104,38942751	Gene ID= ENSG00000269190.5 TPM= 2.12 Transcript Type= protein_coding
chr19	39024053	39032264	39024053	39032264	-	transcript4117.chr19.nic@FBXO27	transcript4117.chr19.nic	protein_coding	39031864,39031209,39031029,39026870,39024053	39032264,39031320,39031124,39027005,39025554	Gene ID= ENSG00000161243.8 TPM= 8.5 Transcript Type= NA
chr19	39009462	39011299	39009462	39011299	-	transcript4120.chr19.nnic@NA	transcript4120.chr19.nnic	NA	39009462	39011299	Gene ID= novel_gene_chr19_4121 TPM= 2.12 Transcript Type= NA
chr19	39125777	39179402	39125777	39179402	+	transcript4123.chr19.nic@PAK4	transcript4123.chr19.nic	protein_coding	39125777,39168230,39169532,39172918,39173576,39174931,39175312,39176590,39177675,39178424	39125919,39168302,39169757,39173376,39174010,39175064,39175438,39176715,39177809,39179402	Gene ID= ENSG00000130669.17 TPM= 11.68 Transcript Type= NA
chr19	39125802	39179402	39125802	39179402	+	ENST00000358301.7@PAK4	ENST00000358301.7	protein_coding	39125802,39169532,39172918,39173576,39174931,39175312,39176590,39177675,39178424	39125919,39169757,39173376,39174010,39175064,39175438,39176715,39177809,39179402	Gene ID= ENSG00000130669.17 TPM= 11.68 Transcript Type= protein_coding
chr19	39170361	39173387	39170361	39173387	-	transcript4126.chr19.nnic@NA	transcript4126.chr19.nnic	NA	39170361	39173387	Gene ID= novel_gene_chr19_4127 TPM= 2.12 Transcript Type= NA
chr19	39306568	39315336	39306568	39315336	-	ENST00000248668.4@LRFN1	ENST00000248668.4	protein_coding	39313931,39306568	39315336,39308542	Gene ID= ENSG00000128011.4 TPM= 1.06 Transcript Type= protein_coding
chr19	39328357	39336185	39328357	39336185	-	ENST00000597595.5@GMFG	ENST00000597595.5	protein_coding	39335974,39335435,39335261,39333077,39329544,39329000,39328357	39336185,39335531,39335310,39333126,39329626,39329073,39328548	Gene ID= ENSG00000130755.12 TPM= 1.06 Transcript Type= protein_coding
chr19	39342421	39384926	39342421	39384926	+	transcript4130.chr19.nnic@SAMD4B	transcript4130.chr19.nnic	protein_coding	39342421,39354006,39355058,39356689,39369655,39375650,39376437,39376705,39377485,39378504,39379966,39380587,39380990,39383208,39383499	39342576,39354066,39355150,39357089,39370125,39375889,39376546,39376791,39377824,39378589,39380084,39380785,39381113,39383291,39384926	Gene ID= ENSG00000179134.15 TPM= 20.71 Transcript Type= NA
chr19	39342421	39384926	39342421	39384926	+	transcript4137.chr19.nnic@SAMD4B	transcript4137.chr19.nnic	protein_coding	39342421,39354006,39355058,39356689,39369655,39375650,39376437,39376705,39377485,39378504,39379966,39380587,39380990,39383208	39342576,39354066,39355150,39357089,39370125,39375889,39376546,39376791,39377824,39378589,39380084,39380785,39381113,39384926	Gene ID= ENSG00000179134.15 TPM= 10.44 Transcript Type= NA
chr19	39342421	39384926	39342421	39384926	+	transcript4138.chr19.nic@SAMD4B	transcript4138.chr19.nic	protein_coding	39342421,39354006,39356689,39369655,39375650,39376437,39376705,39377485,39378504,39379966,39380587,39380990,39383208,39383499	39342576,39354066,39357089,39370125,39375889,39376546,39376791,39377824,39378589,39380084,39380785,39381113,39383291,39384926	Gene ID= ENSG00000179134.15 TPM= 22.84 Transcript Type= NA
chr19	39342414	39384926	39342414	39384926	+	transcript4141.chr19.nic@SAMD4B	transcript4141.chr19.nic	protein_coding	39342414,39356689,39369655,39375650,39376437,39376705,39377485,39378504,39379966,39380587,39380990,39383208,39383499	39342576,39357089,39370125,39375889,39376546,39376791,39377824,39378589,39380084,39380785,39381113,39383291,39384926	Gene ID= ENSG00000179134.15 TPM= 21.24 Transcript Type= NA
chr19	39342421	39384926	39342421	39384926	+	transcript4144.chr19.nic@SAMD4B	transcript4144.chr19.nic	protein_coding	39342421,39354006,39356689,39369655,39375650,39376437,39376705,39377485,39378504,39379966,39380587,39380990,39383208	39342576,39354066,39357089,39370125,39375889,39376546,39376791,39377824,39378589,39380084,39380785,39381113,39384926	Gene ID= ENSG00000179134.15 TPM= 12.57 Transcript Type= NA
chr19	39342414	39384926	39342414	39384926	+	transcript4145.chr19.nic@SAMD4B	transcript4145.chr19.nic	protein_coding	39342414,39356689,39369655,39375650,39376437,39376705,39377485,39378504,39379966,39380587,39380990,39383208	39342576,39357089,39370125,39375889,39376546,39376791,39377824,39378589,39380084,39380785,39381113,39384926	Gene ID= ENSG00000179134.15 TPM= 8.85 Transcript Type= NA
chr19	39385121	39385698	39385121	39385698	+	ENST00000596271.1@SAMD4B	ENST00000596271.1	protein_coding	39385121	39385698	Gene ID= ENSG00000179134.15 TPM= 2.12 Transcript Type= retained_intron
chr19	39368157	39370526	39368157	39370526	-	transcript4154.chr19.nnic@NA	transcript4154.chr19.nnic	NA	39368157	39370526	Gene ID= novel_gene_chr19_4155 TPM= 3.19 Transcript Type= NA
chr19	39385852	39409704	39385852	39409704	-	transcript4135.chr19.nnic@PAF1	transcript4135.chr19.nnic	protein_coding	39409519,39390818,39390260,39390069,39389640,39389480,39389282,39389093,39388947,39388762,39388560,39388339,39386694,39386482,39385852	39409704,39391189,39390289,39390161,39389761,39389546,39389383,39389198,39389015,39388865,39388676,39388467,39386799,39386572,39386403	Gene ID= ENSG00000006712.14 TPM= 8.85 Transcript Type= NA
chr19	39385852	39409677	39385852	39409677	-	transcript4136.chr19.nnic@PAF1	transcript4136.chr19.nnic	protein_coding	39409519,39390818,39390260,39390069,39389640,39389480,39389282,39389093,39388947,39388762,39388560,39388339,39386694,39386482,39385852	39409677,39391224,39390289,39390161,39389761,39389546,39389383,39389198,39389015,39388865,39388676,39388467,39386799,39386572,39386403	Gene ID= ENSG00000006712.14 TPM= 3.54 Transcript Type= NA
chr19	39385852	39391195	39385852	39391195	-	ENST00000221265.7@PAF1	ENST00000221265.7	protein_coding	39390818,39390260,39390069,39389640,39389480,39389282,39389093,39388947,39388762,39388560,39388339,39386694,39386482,39385852	39391195,39390289,39390161,39389761,39389546,39389383,39389198,39389015,39388865,39388676,39388467,39386799,39386572,39386403	Gene ID= ENSG00000006712.14 TPM= 93.82 Transcript Type= protein_coding
chr19	39391396	39399559	39391396	39399559	+	ENST00000599213.6@MED29	ENST00000599213.6	protein_coding	39391396,39392464,39393553,39397457	39391638,39392522,39393637,39399559	Gene ID= ENSG00000063322.13 TPM= 2.12 Transcript Type= protein_coding
chr19	39406813	39409412	39406813	39409412	+	ENST00000597629.1@ZFP36	ENST00000597629.1	protein_coding	39406813,39407743	39406928,39409412	Gene ID= ENSG00000128016.5 TPM= 122.68 Transcript Type= protein_coding
chr19	39406858	39409368	39406858	39409368	+	ENST00000594442.1@ZFP36	ENST00000594442.1	protein_coding	39406858,39407745	39406932,39409368	Gene ID= ENSG00000128016.5 TPM= 5.84 Transcript Type= protein_coding
chr19	39424330	39425675	39424330	39425675	+	transcript4157.chr19.nnic@NA	transcript4157.chr19.nnic	NA	39424330	39425675	Gene ID= novel_gene_chr19_4158 TPM= 2.12 Transcript Type= NA
chr19	39433207	39435948	39433207	39435948	-	ENST00000251453.7@RPS16	ENST00000251453.7	protein_coding	39435848,39435607,39433665,39433522,39433207	39435948,39435708,39433761,39433569,39433418	Gene ID= ENSG00000105193.8 TPM= 500.1 Transcript Type= protein_coding
chr19	39433217	39435941	39433217	39435941	-	ENST00000601655.5@RPS16	ENST00000601655.5	protein_coding	39435848,39435658,39433665,39433522,39433217	39435941,39435708,39433761,39433569,39433418	Gene ID= ENSG00000105193.8 TPM= 12.57 Transcript Type= protein_coding
chr19	39433207	39435915	39433207	39435915	-	ENST00000599539.5@RPS16	ENST00000599539.5	protein_coding	39435848,39435607,39433665,39433494,39433207	39435915,39435708,39433761,39433569,39433418	Gene ID= ENSG00000105193.8 TPM= 3.19 Transcript Type= protein_coding
chr19	39433223	39435948	39433223	39435948	-	ENST00000601390.1@RPS16	ENST00000601390.1	protein_coding	39435848,39433665,39433522,39433223	39435948,39435708,39433569,39433418	Gene ID= ENSG00000105193.8 TPM= 4.6 Transcript Type= retained_intron
chr19	39441643	39476670	39441643	39476670	+	ENST00000599117.5@SUPT5H	ENST00000599117.5	protein_coding	39441643,39445441,39445804,39453356,39457675,39458294,39458818,39459005,39459184,39459559,39459892,39464798,39466480,39466675,39468756,39469079,39469262,39470119,39470377,39471357,39471605,39472409,39472810,39473012,39473203,39473416,39473963,39474234,39474515,39476081,39476256	39441725,39445637,39445965,39453521,39457740,39458305,39458887,39459073,39459249,39459589,39459960,39465049,39466569,39466745,39468861,39469172,39469398,39470274,39470523,39471503,39471730,39472493,39472929,39473114,39473330,39473521,39474121,39474402,39474718,39476176,39476670	Gene ID= ENSG00000196235.13 TPM= 79.4 Transcript Type= protein_coding
chr19	39445546	39476666	39445546	39476666	+	ENST00000402194.6@SUPT5H	ENST00000402194.6	protein_coding	39445546,39445804,39453356,39457675,39458818,39459005,39459184,39459559,39459892,39464798,39466480,39466675,39468756,39469079,39469262,39470119,39470377,39471357,39471605,39472409,39472810,39473012,39473203,39473416,39473963,39474234,39474515,39476081,39476256	39445637,39445965,39453521,39457740,39458887,39459073,39459249,39459589,39459960,39465049,39466569,39466745,39468861,39469172,39469398,39470274,39470523,39471503,39471730,39472493,39472929,39473114,39473330,39473521,39474121,39474402,39474718,39476176,39476666	Gene ID= ENSG00000196235.13 TPM= 22.57 Transcript Type= protein_coding
chr19	39445684	39476670	39445684	39476670	+	ENST00000598725.5@SUPT5H	ENST00000598725.5	protein_coding	39445684,39453356,39457675,39458294,39458818,39459005,39459184,39459559,39459892,39464798,39466480,39466675,39468756,39469079,39469262,39470119,39470377,39471357,39471605,39472409,39472810,39473012,39473203,39473416,39473963,39474234,39474515,39476081,39476256	39445965,39453521,39457740,39458305,39458887,39459073,39459249,39459589,39459960,39465049,39466569,39466745,39468861,39469172,39469398,39470274,39470523,39471503,39471730,39472493,39472929,39473114,39473330,39473521,39474121,39474402,39474718,39476176,39476670	Gene ID= ENSG00000196235.13 TPM= 40.1 Transcript Type= protein_coding
chr19	39480412	39489928	39480412	39489928	+	ENST00000314349.8@TIMM50	ENST00000314349.8	protein_coding	39480412,39481883,39482885,39483135,39485544,39485688,39486187,39486397,39488061,39488539,39489719	39480961,39482033,39482916,39483156,39485602,39485807,39486291,39486495,39488217,39488645,39489928	Gene ID= ENSG00000105197.10 TPM= 159.32 Transcript Type= protein_coding
chr19	39480412	39490888	39480412	39490888	+	ENST00000544017.5@TIMM50	ENST00000544017.5	protein_coding	39480412,39481883,39482885,39483135,39485544,39485688,39486187,39486397,39488061,39488539,39489719	39480961,39482033,39482916,39483156,39485602,39485807,39486291,39486495,39488217,39488645,39490888	Gene ID= ENSG00000105197.10 TPM= 29.74 Transcript Type= protein_coding
chr19	39480484	39489928	39480484	39489928	+	ENST00000601358.5@TIMM50	ENST00000601358.5	protein_coding	39480484,39481883,39482885,39483135,39485688,39486187,39486397,39488061,39488539,39489719	39480961,39482033,39482916,39483156,39485807,39486291,39486495,39488217,39488645,39489928	Gene ID= ENSG00000105197.10 TPM= 3.19 Transcript Type= nonsense_mediated_decay
chr19	39480841	39490119	39480841	39490119	+	ENST00000599794.5@TIMM50	ENST00000599794.5	protein_coding	39480841,39488061,39488539,39489719	39480961,39488217,39488645,39490119	Gene ID= ENSG00000105197.10 TPM= 3.19 Transcript Type= protein_coding
chr19	39480832	39490074	39480832	39490074	+	ENST00000607714.5@TIMM50	ENST00000607714.5	protein_coding	39480832,39481883,39482885,39483135,39485544,39485688,39486187,39486397,39488061,39488539,39489719	39480961,39482033,39482916,39483156,39485602,39485807,39486291,39486495,39488217,39488645,39490074	Gene ID= ENSG00000105197.10 TPM= 32.93 Transcript Type= protein_coding
chr19	39498895	39508468	39498895	39508468	+	ENST00000356433.9@DLL3	ENST00000356433.9	protein_coding	39498895,39499192,39500615,39502815,39504071,39505229,39507039,39507830,39508252	39499043,39499473,39500672,39503057,39504288,39505451,39507618,39507914,39508468	Gene ID= ENSG00000090932.10 TPM= 1.06 Transcript Type= protein_coding
chr19	39531540	39532876	39531540	39532876	-	transcript4193.chr19.nnic@NA	transcript4193.chr19.nnic	NA	39531540	39532876	Gene ID= novel_gene_chr19_4194 TPM= 4.25 Transcript Type= NA
chr19	39538711	39540163	39538711	39540163	-	transcript4195.chr19.nnic@EID2	transcript4195.chr19.nnic	protein_coding	39540002,39538711	39540163,39539570	Gene ID= ENSG00000176396.10 TPM= 2.12 Transcript Type= NA
chr19	39731250	39738028	39731250	39738028	-	ENST00000221804.4@CLC	ENST00000221804.4	protein_coding	39737938,39734997,39734283,39731250	39738028,39735073,39734493,39731505	Gene ID= ENSG00000105205.6 TPM= 1.06 Transcript Type= protein_coding
chr19	39822576	39823481	39822576	39823481	+	transcript4208.chr19.nnic@NA	transcript4208.chr19.nnic	NA	39822576	39823481	Gene ID= novel_gene_chr19_4209 TPM= 14.87 Transcript Type= NA
chr19	39825350	39833634	39825350	39833634	-	ENST00000593685.5@DYRK1B	ENST00000593685.5	protein_coding	39833267,39831805,39830664,39830375,39829880,39828297,39827510,39827285,39826672,39826180,39825350	39833634,39831968,39830783,39830563,39830027,39828583,39827656,39827425,39826987,39826286,39826086	Gene ID= ENSG00000105204.13 TPM= 10.62 Transcript Type= protein_coding
chr19	39825350	39834201	39825350	39834201	-	ENST00000323039.9@DYRK1B	ENST00000323039.9	protein_coding	39834023,39831805,39830664,39830375,39829880,39828297,39827510,39827285,39826672,39826180,39825350	39834201,39831968,39830783,39830563,39830027,39828583,39827656,39827425,39826987,39826286,39826086	Gene ID= ENSG00000105204.13 TPM= 24.43 Transcript Type= protein_coding
chr19	39834458	39846414	39834458	39846414	-	ENST00000221801.7@FBL	ENST00000221801.7	protein_coding	39846291,39840617,39840414,39840233,39839035,39837711,39836556,39834668,39834458	39846414,39840787,39840515,39840327,39839205,39837843,39836668,39834813,39834562	Gene ID= ENSG00000105202.8 TPM= 65.85 Transcript Type= protein_coding
chr19	39863323	39906323	39863323	39906323	-	ENST00000616721.5@FCGBP	ENST00000616721.5	protein_coding	39905731,39902243,39901925,39899556,39895806,39893922,39892911,39891643,39889479,39885991,39885673,39883305,39879555,39877663,39876658,39875388,39873224,39872078,39870216,39866737,39863621,39863323	39906323,39902837,39902124,39899697,39896143,39894495,39893527,39892186,39890071,39886585,39885872,39883446,39879892,39878236,39877274,39875931,39873795,39872651,39870415,39867120,39863892,39863496	Gene ID= ENSG00000275395.5 TPM= 5.31 Transcript Type= protein_coding
chr19	39971005	39981441	39971005	39981441	+	ENST00000157812.6@PSMC4	ENST00000157812.6	protein_coding	39971005,39972146,39972369,39974294,39974524,39974735,39979817,39980070,39980286,39980662,39981192	39971238,39972244,39972555,39974440,39974633,39974828,39979984,39980146,39980454,39980717,39981441	Gene ID= ENSG00000013275.7 TPM= 116.31 Transcript Type= protein_coding
chr19	39971170	39981408	39971170	39981408	+	ENST00000593455.5@PSMC4	ENST00000593455.5	protein_coding	39971170,39972146,39972369,39974294,39974524,39974735,39979817,39980070,39980662,39981192	39971238,39972244,39972555,39974440,39974633,39974828,39979984,39980454,39980717,39981408	Gene ID= ENSG00000013275.7 TPM= 1.06 Transcript Type= retained_intron
chr19	39971180	39981441	39971180	39981441	+	ENST00000601697.5@PSMC4	ENST00000601697.5	protein_coding	39971180,39972146,39972369,39974294,39974524,39974735,39979817,39980070,39980286,39981192	39971238,39972244,39972555,39974440,39974633,39974828,39979984,39980146,39980717,39981441	Gene ID= ENSG00000013275.7 TPM= 1.06 Transcript Type= retained_intron
chr19	39971170	39981441	39971170	39981441	+	ENST00000455878.2@PSMC4	ENST00000455878.2	protein_coding	39971170,39972146,39972462,39974294,39974524,39974735,39979817,39980070,39980286,39980662,39981192	39971238,39972244,39972555,39974440,39974633,39974828,39979984,39980146,39980454,39980717,39981441	Gene ID= ENSG00000013275.7 TPM= 2.66 Transcript Type= protein_coding
chr19	39997063	40016545	39997063	40016545	+	ENST00000600094.5@ZNF546	ENST00000600094.5	protein_coding	39997063,39997861,39998248,40006096,40007274,40008470,40013665	39997157,39997915,39998332,40006182,40007400,40008565,40016545	Gene ID= ENSG00000187187.13 TPM= 1.06 Transcript Type= protein_coding
chr19	40031731	40090934	40031731	40090934	-	transcript4224.chr19.nic@AC005614.2	transcript4224.chr19.nic	processed_transcript	40090906,40090166,40084745,40083111,40081819,40050324,40048670,40047375,40031731	40090934,40090235,40084798,40083237,40081914,40050377,40048796,40047470,40036626	Gene ID= ENSG00000269749.1 TPM= 4.25 Transcript Type= NA
chr19	40230317	40285395	40230317	40285395	-	ENST00000392038.6@AKT2	ENST00000392038.6	protein_coding	40285181,40265222,40256926,40255158,40242534,40241938,40240045,40238905,40237969,40236257,40235890,40235263,40235045,40230317	40285395,40265351,40257054,40255269,40242687,40242069,40240110,40238973,40238091,40236385,40236104,40235350,40235147,40233951	Gene ID= ENSG00000105221.16 TPM= 11.15 Transcript Type= protein_coding
chr19	40240958	40285357	40240958	40285357	-	transcript4236.chr19.nic@AKT2	transcript4236.chr19.nic	protein_coding	40285181,40265222,40256926,40255158,40242534,40240958	40285357,40265351,40257054,40255269,40242687,40242069	Gene ID= ENSG00000105221.16 TPM= 2.66 Transcript Type= NA
chr19	40232331	40233274	40232331	40233274	-	transcript4240.chr19.nnic@AKT2	transcript4240.chr19.nnic	protein_coding	40233260,40232331	40233274,40232880	Gene ID= ENSG00000105221.16 TPM= 5.31 Transcript Type= NA
chr19	40243914	40246106	40243914	40246106	+	transcript4242.chr19.nnic@NA	transcript4242.chr19.nnic	NA	40243914	40246106	Gene ID= novel_gene_chr19_4243 TPM= 3.19 Transcript Type= NA
chr19	40314638	40318736	40314638	40318736	-	transcript4253.chr19.nnic@NA	transcript4253.chr19.nnic	NA	40314638	40318736	Gene ID= novel_gene_chr19_4254 TPM= 15.93 Transcript Type= NA
chr19	40321080	40348425	40321080	40348425	-	transcript4244.chr19.nnic@C19orf47	transcript4244.chr19.nnic	protein_coding	40348324,40347189,40341839,40336320,40336110,40333851,40328413,40326334,40324006,40322028,40321080	40348425,40347311,40341890,40336407,40336224,40333929,40328550,40326486,40324076,40322376,40321350	Gene ID= ENSG00000160392.13 TPM= 10.27 Transcript Type= NA
chr19	40321080	40348418	40321080	40348418	-	transcript4248.chr19.nic@C19orf47	transcript4248.chr19.nic	protein_coding	40348324,40341839,40336320,40336110,40333851,40328413,40326334,40324006,40322028,40321080	40348418,40341890,40336407,40336224,40333929,40328550,40326486,40324076,40322376,40321350	Gene ID= ENSG00000160392.13 TPM= 24.08 Transcript Type= NA
chr19	40321063	40348418	40321063	40348418	-	transcript4250.chr19.nic@C19orf47	transcript4250.chr19.nic	protein_coding	40348324,40341839,40336320,40336110,40333851,40328413,40326334,40324006,40321063	40348418,40341890,40336407,40336224,40333929,40328550,40326486,40324076,40322376	Gene ID= ENSG00000160392.13 TPM= 8.5 Transcript Type= NA
chr19	40321080	40341974	40321080	40341974	-	transcript4251.chr19.nic@C19orf47	transcript4251.chr19.nic	protein_coding	40341839,40336320,40336110,40333851,40328413,40326334,40324006,40322028,40321080	40341974,40336407,40336224,40333929,40328550,40326486,40324076,40322376,40321350	Gene ID= ENSG00000160392.13 TPM= 37.89 Transcript Type= NA
chr19	40321080	40322339	40321080	40322339	-	ENST00000584868.1@C19orf47	ENST00000584868.1	protein_coding	40322028,40321080	40322339,40321350	Gene ID= ENSG00000160392.13 TPM= 5.31 Transcript Type= processed_transcript
chr19	40348667	40378483	40348667	40378483	+	transcript4257.chr19.nic@PLD3	transcript4257.chr19.nic	protein_coding	40348667,40365553,40366419,40366610,40366773,40367696,40369908,40370110,40371673,40374481,40376609,40377786,40377986	40348724,40365930,40366510,40366684,40366915,40367879,40370028,40370237,40371873,40374620,40376774,40377885,40378483	Gene ID= ENSG00000105223.19 TPM= 26.11 Transcript Type= NA
chr19	40348667	40378483	40348667	40378483	+	transcript4261.chr19.nic@PLD3	transcript4261.chr19.nic	protein_coding	40348667,40365553,40366419,40366610,40366773,40367696,40369908,40370110,40371673,40374481,40376609,40377786,40377986	40348768,40365585,40366510,40366684,40366915,40367879,40370028,40370237,40371873,40374620,40376774,40377885,40378483	Gene ID= ENSG00000105223.19 TPM= 30.89 Transcript Type= NA
chr19	40348667	40378483	40348667	40378483	+	transcript4262.chr19.nic@PLD3	transcript4262.chr19.nic	protein_coding	40348667,40365553,40366384,40366610,40366773,40367696,40369908,40370110,40371673,40374481,40376609,40377786,40377986	40348768,40365930,40366510,40366684,40366915,40367879,40370028,40370237,40371873,40374620,40376774,40377885,40378483	Gene ID= ENSG00000105223.19 TPM= 19.2 Transcript Type= NA
chr19	40348667	40378483	40348667	40378483	+	transcript4263.chr19.nic@PLD3	transcript4263.chr19.nic	protein_coding	40348667,40365553,40366419,40366610,40366773,40367696,40369908,40370110,40371673,40374481,40376609,40377786,40377986	40348768,40365930,40366510,40366684,40366915,40367879,40370028,40370237,40371873,40374620,40376774,40377885,40378483	Gene ID= ENSG00000105223.19 TPM= 77.09 Transcript Type= NA
chr19	40348690	40378483	40348690	40378483	+	ENST00000409735.8@PLD3	ENST00000409735.8	protein_coding	40348690,40365718,40366419,40366610,40366773,40367696,40369908,40370110,40371673,40374481,40376609,40377786,40377986	40348768,40365930,40366510,40366684,40366915,40367879,40370028,40370237,40371873,40374620,40376774,40377885,40378483	Gene ID= ENSG00000105223.19 TPM= 29.29 Transcript Type= protein_coding
chr19	40348700	40378483	40348700	40378483	+	ENST00000356508.9@PLD3	ENST00000356508.9	protein_coding	40348700,40365553,40366419,40366610,40366773,40367696,40369908,40370110,40371673,40374481,40376609,40377786,40377986	40348724,40365585,40366510,40366684,40366915,40367879,40370028,40370237,40371873,40374620,40376774,40377885,40378483	Gene ID= ENSG00000105223.19 TPM= 38.32 Transcript Type= protein_coding
chr19	40348678	40378475	40348678	40378475	+	ENST00000409419.5@PLD3	ENST00000409419.5	protein_coding	40348678,40366384,40366610,40366773,40367696,40369908,40370110,40371673,40374481,40376609,40377786,40377986	40348768,40366510,40366684,40366915,40367879,40370028,40370237,40371873,40374620,40376774,40377885,40378475	Gene ID= ENSG00000105223.19 TPM= 7.79 Transcript Type= protein_coding
chr19	40348685	40378483	40348685	40378483	+	ENST00000409587.5@PLD3	ENST00000409587.5	protein_coding	40348685,40365718,40366384,40366610,40366773,40367696,40369908,40370110,40371673,40374481,40376609,40377786,40377986	40348768,40365930,40366510,40366684,40366915,40367879,40370028,40370237,40371873,40374620,40376774,40377885,40378483	Gene ID= ENSG00000105223.19 TPM= 13.89 Transcript Type= protein_coding
chr19	40355842	40360606	40355842	40360606	+	ENST00000622968.1@AC118344.2	ENST00000622968.1	TEC	40355842	40360606	Gene ID= ENSG00000279759.1 TPM= 2.12 Transcript Type= TEC
chr19	40393768	40404045	40393768	40404045	-	transcript4273.chr19.nic@PRX	transcript4273.chr19.nic	protein_coding	40403706,40398620,40393768	40404045,40398816,40397970	Gene ID= ENSG00000105227.14 TPM= 8.5 Transcript Type= NA
chr19	40421592	40426025	40421592	40426025	-	ENST00000357949.4@SERTAD1	ENST00000357949.4	protein_coding	40425867,40421592	40426025,40423546	Gene ID= ENSG00000197019.4 TPM= 27.62 Transcript Type= protein_coding
chr19	40440844	40444705	40440844	40444705	-	ENST00000322354.3@SERTAD3	ENST00000322354.3	protein_coding	40444215,40440844	40444705,40442086	Gene ID= ENSG00000167565.12 TPM= 37.18 Transcript Type= protein_coding
chr19	40447789	40465840	40447789	40465840	-	ENST00000263368.8@BLVRB	ENST00000263368.8	protein_coding	40465610,40458381,40458155,40451364,40447789	40465840,40458545,40458244,40451492,40448046	Gene ID= ENSG00000090013.9 TPM= 97.72 Transcript Type= protein_coding
chr19	40467193	40515628	40467193	40515628	+	transcript4281.chr19.nic@SPTBN4	transcript4281.chr19.nic	protein_coding	40467193,40472607,40487697,40490075,40492963,40494897,40497489,40501921,40502128,40502390,40502775,40503830,40506236,40512606,40515311	40467305,40472790,40487848,40490248,40493054,40494977,40497604,40502033,40502315,40502507,40502933,40504132,40506386,40513554,40515628	Gene ID= ENSG00000160460.15 TPM= 3.19 Transcript Type= NA
chr19	40530488	40560752	40530488	40560752	+	ENST00000392023.1@SPTBN4	ENST00000392023.1	protein_coding	40530488,40532625,40534080,40549189,40550238,40554147,40554516,40556084,40557023,40560159	40530590,40532771,40534343,40549413,40550327,40554425,40554646,40556288,40557403,40560752	Gene ID= ENSG00000160460.15 TPM= 1.06 Transcript Type= protein_coding
chr19	40576851	40591397	40576851	40591397	+	ENST00000291842.9@SHKBP1	ENST00000291842.9	protein_coding	40576851,40577231,40577396,40577557,40578154,40578462,40580324,40580566,40580746,40582351,40583398,40583601,40586774,40588624,40589082,40590244,40590730,40590976	40576985,40577284,40577441,40577630,40578212,40578542,40580485,40580656,40580936,40582466,40583485,40583717,40586944,40588779,40589178,40590422,40590853,40591397	Gene ID= ENSG00000160410.14 TPM= 43.55 Transcript Type= protein_coding
chr19	40577130	40591397	40577130	40591397	+	transcript4293.chr19.nic@SHKBP1	transcript4293.chr19.nic	protein_coding	40577130,40577396,40577557,40578462,40580324,40580566,40580746,40582351,40583398,40583601,40586774,40588624,40589082,40590244,40590730,40590976	40577284,40577441,40577630,40578542,40580485,40580656,40580936,40582466,40583485,40583717,40586944,40588779,40589178,40590422,40590853,40591397	Gene ID= ENSG00000160410.14 TPM= 5.31 Transcript Type= NA
chr19	40601332	40629818	40601332	40629818	+	transcript4299.chr19.nic@LTBP4	transcript4299.chr19.nic	protein_coding	40601332,40605035,40605405,40605729,40606233,40606404,40607365,40608220,40608484,40609530,40609746,40610532,40611152,40611859,40612073,40613065,40613404,40613916,40614315,40617100,40619347,40622401,40622950,40623604,40623936,40625857,40626975,40627705,40629396	40601637,40605226,40605652,40605831,40606307,40606526,40607529,40608369,40608603,40609661,40609871,40610657,40611394,40611984,40612192,40613196,40613529,40614038,40614446,40617225,40619493,40622667,40623021,40623732,40624082,40626009,40627355,40627857,40629818	Gene ID= ENSG00000090006.17 TPM= 35.76 Transcript Type= NA
chr19	40613373	40629818	40613373	40629818	+	transcript4312.chr19.nic@LTBP4	transcript4312.chr19.nic	protein_coding	40613373,40613916,40614315,40616889,40617100,40619347,40623604,40623936,40625857,40626975,40627705,40629396	40613529,40614038,40614446,40617020,40617225,40619493,40623732,40624082,40626009,40627355,40627857,40629818	Gene ID= ENSG00000090006.17 TPM= 22.66 Transcript Type= NA
chr19	40614111	40629818	40614111	40629818	+	transcript4313.chr19.nic@LTBP4	transcript4313.chr19.nic	protein_coding	40614111,40619347,40622401,40622950,40623604,40623936,40625857,40626975,40627705,40629396	40614446,40619493,40622667,40623021,40623732,40624082,40626009,40627355,40627857,40629818	Gene ID= ENSG00000090006.17 TPM= 26.9 Transcript Type= NA
chr19	40601332	40608921	40601332	40608921	+	transcript4316.chr19.nic@LTBP4	transcript4316.chr19.nic	protein_coding	40601332,40605035,40605405,40605729,40606233,40606404,40607365,40608220,40608484	40601637,40605226,40605652,40605831,40606307,40606526,40607529,40608369,40608921	Gene ID= ENSG00000090006.17 TPM= 5.66 Transcript Type= NA
chr19	40601332	40606156	40601332	40606156	+	transcript4326.chr19.nic@LTBP4	transcript4326.chr19.nic	protein_coding	40601332,40605035,40605405	40601637,40605226,40606156	Gene ID= ENSG00000090006.17 TPM= 6.72 Transcript Type= NA
chr19	40625318	40627501	40625318	40627501	-	transcript4328.chr19.nnic@NA	transcript4328.chr19.nnic	NA	40625318	40627501	Gene ID= novel_gene_chr19_4329 TPM= 7.44 Transcript Type= NA
chr19	40665905	40690651	40665905	40690651	-	ENST00000252891.8@NUMBL	ENST00000252891.8	protein_coding	40690460,40686911,40684417,40682894,40682728,40680917,40677232,40673344,40669898,40665905	40690651,40686995,40684556,40682968,40682802,40681057,40677421,40673649,40670020,40668138	Gene ID= ENSG00000105245.9 TPM= 3.19 Transcript Type= protein_coding
chr19	40691530	40715111	40691530	40715111	-	transcript4334.chr19.nic@COQ8B	transcript4334.chr19.nic	protein_coding	40715057,40714531,40714278,40714067,40710059,40705325,40705096,40703715,40703541,40702600,40700310,40700067,40695989,40692951,40691530	40715111,40714635,40714397,40714133,40710136,40705447,40705181,40703855,40703622,40702693,40700451,40700174,40696054,40693037,40692373	Gene ID= ENSG00000123815.11 TPM= 6.37 Transcript Type= NA
chr19	40691530	40716920	40691530	40716920	-	transcript4337.chr19.nic@COQ8B	transcript4337.chr19.nic	protein_coding	40716862,40714531,40714278,40714067,40710059,40705325,40705096,40703715,40703541,40702600,40700310,40700067,40695989,40692951,40691530	40716920,40714635,40714397,40714133,40710136,40705447,40705181,40703855,40703622,40702693,40700451,40700174,40696054,40693037,40692373	Gene ID= ENSG00000123815.11 TPM= 4.25 Transcript Type= NA
chr19	40691530	40716920	40691530	40716920	-	transcript4343.chr19.nic@COQ8B	transcript4343.chr19.nic	protein_coding	40716862,40714531,40714278,40714067,40710059,40705096,40703715,40703541,40702600,40700310,40700067,40695989,40692951,40691530	40716920,40714635,40714397,40714133,40710136,40705447,40703855,40703622,40702693,40700451,40700174,40696054,40693037,40692373	Gene ID= ENSG00000123815.11 TPM= 4.25 Transcript Type= NA
chr19	40717103	40740860	40717103	40740860	+	ENST00000263370.2@ITPKC	ENST00000263370.2	protein_coding	40717103,40725340,40729202,40733160,40736986,40737698,40739357	40718290,40725439,40729415,40733364,40737087,40737769,40740860	Gene ID= ENSG00000086544.2 TPM= 27.62 Transcript Type= protein_coding
chr19	40740856	40750478	40740856	40750478	-	transcript4348.chr19.nic@C19orf54	transcript4348.chr19.nic	protein_coding	40750285,40749481,40745130,40744559,40744067,40743905,40740856	40750478,40749607,40745198,40744683,40744196,40743975,40742770	Gene ID= ENSG00000188493.14 TPM= 6.37 Transcript Type= NA
chr19	40750859	40765389	40750859	40765389	+	ENST00000243563.7@SNRPA	ENST00000243563.7	protein_coding	40750859,40757332,40759431,40762901,40763587,40765008	40751481,40757504,40759610,40763074,40763675,40765389	Gene ID= ENSG00000077312.8 TPM= 20.18 Transcript Type= protein_coding
chr19	40778221	40796938	40778221	40796938	+	transcript4364.chr19.nic@RAB4B	transcript4364.chr19.nic	protein_coding	40778221,40780019,40783778,40783921,40786665,40786848,40796570	40778391,40780499,40783840,40784075,40786760,40786978,40796938	Gene ID= ENSG00000167578.17 TPM= 8.5 Transcript Type= NA
chr19	40778216	40792572	40778216	40792572	+	ENST00000594800.5@RAB4B	ENST00000594800.5	protein_coding	40778216,40780019,40780385,40783778,40783921,40786665,40786848,40792217	40778391,40780099,40780499,40783840,40784075,40786760,40786978,40792572	Gene ID= ENSG00000167578.17 TPM= 1.06 Transcript Type= protein_coding
chr19	40778266	40796935	40778266	40796935	+	ENST00000357052.7@RAB4B	ENST00000357052.7	protein_coding	40778266,40780019,40780385,40783778,40783921,40786665,40786848,40796570	40778391,40780099,40780499,40783840,40784075,40786760,40786978,40796935	Gene ID= ENSG00000167578.17 TPM= 33.99 Transcript Type= protein_coding
chr19	40778259	40796938	40778259	40796938	+	transcript4366.chr19.nic@RAB4B-EGLN2	transcript4366.chr19.nic	protein_coding	40778259,40786665,40786848,40796570	40778391,40786760,40786978,40796938	Gene ID= ENSG00000171570.10 TPM= 9.56 Transcript Type= NA
chr19	40799187	40808432	40799187	40808432	+	ENST00000303961.8@EGLN2	ENST00000303961.8	protein_coding	40799187,40800339,40806555,40807138,40807484,40807809	40799262,40801415,40806674,40807274,40807551,40808432	Gene ID= ENSG00000269858.5 TPM= 159.41 Transcript Type= protein_coding
chr19	40800338	40808426	40800338	40808426	+	transcript4378.chr19.nnic@NA	transcript4378.chr19.nnic	NA	40800338	40808426	Gene ID= novel_gene_chr19_4379 TPM= 32.93 Transcript Type= NA
chr19	41219203	41261766	41219203	41261766	+	ENST00000301178.8@AXL	ENST00000301178.8	protein_coding	41219203,41220636,41221146,41221880,41230967,41231183,41237944,41238470,41239164,41239694,41242883,41243616,41248514,41248743,41252351,41252846,41253599,41256452,41257493,41259553	41219477,41220858,41221246,41222056,41231047,41231298,41238154,41238609,41239314,41239720,41243015,41243707,41248609,41248820,41252443,41252967,41253708,41256611,41257629,41261766	Gene ID= ENSG00000167601.11 TPM= 28.68 Transcript Type= protein_coding
chr19	41219235	41260294	41219235	41260294	+	ENST00000359092.7@AXL	ENST00000359092.7	protein_coding	41219235,41220636,41221146,41221880,41230967,41231183,41237944,41238470,41239164,41242883,41243616,41248514,41248743,41252351,41252846,41253599,41256452,41257493,41259553	41219477,41220858,41221246,41222056,41231047,41231298,41238154,41238609,41239314,41243015,41243707,41248609,41248820,41252443,41252967,41253708,41256611,41257629,41260294	Gene ID= ENSG00000167601.11 TPM= 2.12 Transcript Type= protein_coding
chr19	41262519	41307019	41262519	41307019	+	ENST00000595018.5@HNRNPUL1	ENST00000595018.5	protein_coding	41262519,41268223,41272082,41273982,41276159,41279077,41281163,41292245,41294338,41294558,41301536,41302665,41303972,41305676,41306449	41262582,41268345,41272235,41274055,41276298,41279176,41281275,41292511,41294460,41294686,41301704,41302949,41304261,41305867,41307019	Gene ID= ENSG00000105323.16 TPM= 3.54 Transcript Type= protein_coding
chr19	41264331	41307376	41264331	41307376	+	ENST00000392006.7@HNRNPUL1	ENST00000392006.7	protein_coding	41264331,41268223,41272082,41273982,41276159,41279077,41281163,41292245,41294338,41294558,41301536,41302665,41303972,41305676,41306449	41264798,41268345,41272235,41274055,41276298,41279176,41281275,41292511,41294460,41294686,41301704,41302949,41304261,41305867,41307376	Gene ID= ENSG00000105323.16 TPM= 37.53 Transcript Type= protein_coding
chr19	41264411	41307050	41264411	41307050	+	ENST00000595196.5@HNRNPUL1	ENST00000595196.5	protein_coding	41264411,41268223,41272082,41273982,41276159,41279077,41281163,41292245,41294338,41294558,41301536,41302665,41303972,41305676,41306449	41264692,41268345,41272235,41274055,41276298,41279176,41281275,41292511,41294460,41294686,41301704,41302949,41304261,41305867,41307050	Gene ID= ENSG00000105323.16 TPM= 38.59 Transcript Type= nonsense_mediated_decay
chr19	41310189	41324883	41310189	41324883	+	ENST00000269967.3@CCDC97	ENST00000269967.3	protein_coding	41310189,41316384,41319574,41320341,41322595	41310356,41316839,41319852,41320470,41324883	Gene ID= ENSG00000142039.3 TPM= 23.9 Transcript Type= protein_coding
chr19	41310194	41320992	41310194	41320992	+	transcript4399.chr19.nic@CCDC97	transcript4399.chr19.nic	protein_coding	41310194,41316384,41319574,41320341	41310356,41316839,41319852,41320992	Gene ID= ENSG00000142039.3 TPM= 3.72 Transcript Type= NA
chr19	41354421	41364173	41354421	41364173	-	ENST00000243578.7@B9D2	ENST00000243578.7	protein_coding	41363958,41363432,41357897,41354421	41364173,41363523,41358022,41355013	Gene ID= ENSG00000123810.7 TPM= 4.25 Transcript Type= protein_coding
chr19	41376578	41384083	41376578	41384083	+	ENST00000436170.6@TMEM91	ENST00000436170.6	protein_coding	41376578,41378281,41382772,41383886	41376854,41378519,41382921,41384083	Gene ID= ENSG00000142046.14 TPM= 1.06 Transcript Type= protein_coding
chr19	41373600	41375255	41373600	41375255	-	transcript4423.chr19.nnic@NA	transcript4423.chr19.nnic	NA	41373600	41375255	Gene ID= novel_gene_chr19_4424 TPM= 2.12 Transcript Type= NA
chr19	41373971	41374419	41373971	41374419	+	ENST00000616866.1@AC011462.4	ENST00000616866.1	sense_intronic	41373971	41374419	Gene ID= ENSG00000277744.1 TPM= 1.06 Transcript Type= sense_intronic
chr19	41386374	41397479	41386374	41397479	-	ENST00000221233.8@EXOSC5	ENST00000221233.8	protein_coding	41397181,41392867,41391841,41389765,41387514,41386374	41397479,41392980,41391962,41389905,41387603,41386725	Gene ID= ENSG00000077348.8 TPM= 16.99 Transcript Type= protein_coding
chr19	41397460	41425005	41397460	41425005	+	ENST00000269980.6@BCKDHA	ENST00000269980.6	protein_coding	41397460,41410637,41410923,41414049,41419135,41422164,41422629,41422998,41424438	41397935,41410816,41411009,41414157,41419296,41422370,41422770,41423169,41425005	Gene ID= ENSG00000248098.11 TPM= 183.22 Transcript Type= protein_coding
chr19	41397791	41425001	41397791	41425001	+	transcript4409.chr19.nnic@BCKDHA	transcript4409.chr19.nnic	protein_coding	41397791,41410637,41410923,41414049,41419135,41422629,41422998,41424438	41397935,41410816,41411009,41414157,41419296,41422770,41423169,41425001	Gene ID= ENSG00000248098.11 TPM= 24.96 Transcript Type= NA
chr19	41412382	41415272	41412382	41415272	-	transcript4421.chr19.nnic@NA	transcript4421.chr19.nnic	NA	41412382	41415272	Gene ID= novel_gene_chr19_4422 TPM= 6.37 Transcript Type= NA
chr19	41424256	41427400	41424256	41427400	-	transcript4418.chr19.nic@B3GNT8	transcript4418.chr19.nic	protein_coding	41427284,41424256	41427400,41426810	Gene ID= ENSG00000177191.2 TPM= 5.31 Transcript Type= NA
chr19	41425359	41428730	41425359	41428730	-	ENST00000321702.2@B3GNT8	ENST00000321702.2	protein_coding	41428596,41427284,41425359	41428730,41427570,41426810	Gene ID= ENSG00000177191.2 TPM= 6.37 Transcript Type= protein_coding
chr19	41431319	41439905	41431319	41439905	-	ENST00000221943.13@DMAC2	ENST00000221943.13	protein_coding	41439882,41438218,41436392,41433537,41433272,41431319	41439905,41438414,41436472,41433673,41433434,41432408	Gene ID= ENSG00000105341.18 TPM= 55.23 Transcript Type= protein_coding
chr19	41431318	41439910	41431318	41439910	-	ENST00000438807.7@DMAC2	ENST00000438807.7	protein_coding	41439882,41438218,41433537,41431318	41439910,41438414,41433673,41432408	Gene ID= ENSG00000105341.18 TPM= 21.24 Transcript Type= protein_coding
chr19	41431339	41439936	41431339	41439936	-	ENST00000592922.6@DMAC2	ENST00000592922.6	protein_coding	41439882,41438218,41433537,41433272,41431339	41439936,41438414,41433673,41433434,41432408	Gene ID= ENSG00000105341.18 TPM= 2.12 Transcript Type= protein_coding
chr19	41479128	41500644	41479128	41500644	-	transcript4428.chr19.nnic@PCAT19	transcript4428.chr19.nnic	lincRNA	41500584,41495302,41479128	41500644,41495427,41479284	Gene ID= ENSG00000267107.6 TPM= 9.56 Transcript Type= NA
chr19	41455696	41500649	41455696	41500649	-	ENST00000594315.1@PCAT19	ENST00000594315.1	lincRNA	41500584,41479081,41455696	41500649,41479284,41456487	Gene ID= ENSG00000267107.6 TPM= 1.06 Transcript Type= lincRNA
chr19	41860257	41871416	41860257	41871416	+	ENST00000221975.6@RPS19	ENST00000221975.6	protein_coding	41860257,41860785,41861112,41869031,41869699,41871351	41860289,41860845,41861212,41869214,41869753,41871416	Gene ID= ENSG00000105372.6 TPM= 407.69 Transcript Type= protein_coding
chr19	41860446	41871416	41860446	41871416	+	ENST00000593863.5@RPS19	ENST00000593863.5	protein_coding	41860446,41860775,41861112,41869031,41869699,41871351	41860494,41860845,41861212,41869214,41869753,41871416	Gene ID= ENSG00000105372.6 TPM= 32.75 Transcript Type= protein_coding
chr19	41884339	41907443	41884339	41907443	+	transcript4439.chr19.nic@ARHGEF1	transcript4439.chr19.nic	protein_coding	41884339,41888064,41888192,41888752,41892025,41892331,41892603,41893274,41894207,41894451,41894626,41895349,41896377,41897946,41898442,41901887,41902274,41902533,41902784,41903307,41903707,41904035,41904216,41904949,41905175,41905760,41905939,41906457,41906703,41907105	41884493,41888106,41888278,41888865,41892123,41892373,41892849,41893303,41894306,41894547,41894661,41895486,41896482,41898113,41898587,41902033,41902356,41902658,41902898,41903407,41903784,41904110,41904383,41905036,41905261,41905827,41906025,41906620,41906803,41907443	Gene ID= ENSG00000076928.17 TPM= 14.87 Transcript Type= NA
chr19	41883192	41907443	41883192	41907443	+	transcript4441.chr19.nic@ARHGEF1	transcript4441.chr19.nic	protein_coding	41883192,41888064,41888192,41888752,41892331,41892603,41893274,41894207,41894451,41894626,41895349,41896377,41897946,41898442,41901887,41902274,41902533,41902784,41903307,41903707,41904035,41904216,41904949,41905175,41905760,41905939,41906457,41906703,41907105	41883289,41888106,41888278,41888865,41892373,41892849,41893303,41894306,41894547,41894661,41895486,41896482,41898113,41898587,41902033,41902356,41902658,41902898,41903407,41903784,41904110,41904383,41905036,41905261,41905827,41906025,41906620,41906803,41907443	Gene ID= ENSG00000076928.17 TPM= 6.37 Transcript Type= NA
chr19	41883161	41907443	41883161	41907443	+	ENST00000354532.7@ARHGEF1	ENST00000354532.7	protein_coding	41883161,41888064,41888192,41888752,41892025,41892331,41892603,41893274,41894207,41894451,41894626,41895349,41896377,41898442,41901887,41902274,41902533,41902784,41903307,41903707,41904035,41904216,41904949,41905175,41905760,41905939,41906457,41906703,41907105	41883289,41888106,41888278,41888865,41892123,41892373,41892849,41893303,41894306,41894547,41894661,41895486,41896482,41898587,41902033,41902356,41902658,41902898,41903407,41903784,41904110,41904383,41905036,41905261,41905827,41906025,41906620,41906803,41907443	Gene ID= ENSG00000076928.17 TPM= 10.09 Transcript Type= protein_coding
chr19	41884448	41907454	41884448	41907454	+	ENST00000337665.8@ARHGEF1	ENST00000337665.8	protein_coding	41884448,41888064,41888192,41888752,41892025,41892331,41892603,41893274,41894207,41894451,41894626,41895349,41896377,41898442,41901887,41902274,41902533,41902784,41903307,41903707,41904035,41904216,41904949,41905175,41905760,41905939,41906457,41906703,41907105	41884493,41888106,41888278,41888865,41892123,41892373,41892849,41893303,41894306,41894547,41894661,41895486,41896482,41898587,41902033,41902356,41902658,41902898,41903407,41903784,41904110,41904383,41905036,41905261,41905827,41906025,41906620,41906803,41907454	Gene ID= ENSG00000076928.17 TPM= 9.03 Transcript Type= protein_coding
chr19	41956681	41959390	41956681	41959390	-	ENST00000222008.10@RABAC1	ENST00000222008.10	protein_coding	41959237,41958736,41958286,41957018,41956681	41959390,41958948,41958383,41957119,41956934	Gene ID= ENSG00000105404.10 TPM= 185.35 Transcript Type= protein_coding
chr19	41956681	41959299	41956681	41959299	-	ENST00000601891.5@RABAC1	ENST00000601891.5	protein_coding	41959237,41958736,41958286,41956681	41959299,41958948,41958383,41956934	Gene ID= ENSG00000105404.10 TPM= 7.97 Transcript Type= protein_coding
chr19	41966582	41994276	41966582	41994276	-	ENST00000302102.9@ATP1A3	ENST00000302102.9	protein_coding	41994071,41988476,41988318,41987936,41986116,41985864,41985306,41984918,41981908,41981722,41981502,41978606,41978151,41977936,41976416,41975629,41970388,41970185,41969435,41968785,41967662,41967249,41966582	41994276,41988562,41988377,41988139,41986229,41985998,41985423,41985186,41982106,41981831,41981636,41978798,41978326,41978072,41976566,41975797,41970542,41970308,41969580,41968915,41967763,41967340,41966965	Gene ID= ENSG00000105409.16 TPM= 175.26 Transcript Type= protein_coding
chr19	41990347	41992543	41990347	41992543	-	transcript4461.chr19.nnic@NA	transcript4461.chr19.nnic	NA	41990347	41992543	Gene ID= novel_gene_chr19_4462 TPM= 2.12 Transcript Type= NA
chr19	42198599	42209803	42198599	42209803	-	transcript4469.chr19.nic@DEDD2	transcript4469.chr19.nic	protein_coding	42209700,42202051,42198599	42209803,42202072,42199829	Gene ID= ENSG00000160570.13 TPM= 2.12 Transcript Type= NA
chr19	42198616	42217742	42198616	42217742	-	ENST00000593804.5@DEDD2	ENST00000593804.5	protein_coding	42217632,42215133,42209700,42198616	42217742,42215252,42209840,42199829	Gene ID= ENSG00000160570.13 TPM= 4.25 Transcript Type= processed_transcript
chr19	42198598	42217669	42198598	42217669	-	ENST00000336034.8@DEDD2	ENST00000336034.8	protein_coding	42217632,42216680,42215148,42209700,42198598	42217669,42217045,42215252,42209840,42199829	Gene ID= ENSG00000160570.13 TPM= 12.75 Transcript Type= protein_coding
chr19	42198613	42220123	42198613	42220123	-	ENST00000595337.5@DEDD2	ENST00000595337.5	protein_coding	42220074,42216680,42215133,42209700,42198613	42220123,42217045,42215252,42209840,42199829	Gene ID= ENSG00000160570.13 TPM= 3.19 Transcript Type= protein_coding
chr19	42220271	42228201	42220271	42228201	+	ENST00000301215.7@ZNF526	ENST00000301215.7	protein_coding	42220271,42224215,42224387	42220387,42224305,42228201	Gene ID= ENSG00000167625.10 TPM= 1.06 Transcript Type= protein_coding
chr19	42230186	42242593	42230186	42242593	-	ENST00000222330.7@GSK3A	ENST00000222330.7	protein_coding	42242183,42239955,42236858,42236606,42234548,42234353,42233286,42233110,42232496,42232057,42230186	42242593,42240142,42236941,42236716,42234678,42234459,42233383,42233205,42232682,42232149,42230867	Gene ID= ENSG00000105723.11 TPM= 47.8 Transcript Type= protein_coding
chr19	42247572	42255157	42247572	42255157	-	ENST00000222329.8@ERF	ENST00000222329.8	protein_coding	42254978,42250331,42249827,42247572	42255157,42250565,42249942,42249738	Gene ID= ENSG00000105722.9 TPM= 43.55 Transcript Type= protein_coding
chr19	42250130	42255107	42250130	42255107	-	ENST00000596818.1@ERF	ENST00000596818.1	protein_coding	42254978,42250130	42255107,42250565	Gene ID= ENSG00000105722.9 TPM= 1.06 Transcript Type= retained_intron
chr19	42297033	42302777	42297033	42302777	-	ENST00000538771.5@PAFAH1B3	ENST00000538771.5	protein_coding	42302437,42302232,42301950,42300171,42299970,42297033	42302777,42302325,42302039,42300287,42300092,42297365	Gene ID= ENSG00000079462.7 TPM= 1.59 Transcript Type= protein_coding
chr19	42297033	42302571	42297033	42302571	-	ENST00000262890.7@PAFAH1B3	ENST00000262890.7	protein_coding	42302232,42301950,42300171,42299970,42297033	42302571,42302039,42300287,42300092,42297365	Gene ID= ENSG00000079462.7 TPM= 4.78 Transcript Type= protein_coding
chr19	42387019	42390287	42387019	42390287	-	ENST00000222032.9@CNFN	ENST00000222032.9	protein_coding	42390240,42388926,42387340,42387019	42390287,42389039,42387476,42387242	Gene ID= ENSG00000105427.9 TPM= 1.06 Transcript Type= protein_coding
chr19	42397128	42408452	42397128	42408452	+	ENST00000593491.2@LIPE-AS1	ENST00000593491.2	antisense_RNA	42397128,42408258	42397224,42408452	Gene ID= ENSG00000213904.8 TPM= 1.06 Transcript Type= antisense_RNA
chr19	42401507	42423584	42401507	42423584	-	transcript4488.chr19.nic@LIPE	transcript4488.chr19.nic	protein_coding	42423419,42410307,42408232,42407976,42407606,42407174,42406161,42405385,42402607,42401507	42423584,42410842,42408322,42408121,42407791,42407468,42406388,42405561,42403031,42402075	Gene ID= ENSG00000079435.9 TPM= 20.18 Transcript Type= NA
chr19	42420011	42423551	42420011	42423551	-	transcript4491.chr19.nnic@NA	transcript4491.chr19.nnic	NA	42420011	42423551	Gene ID= novel_gene_chr19_4492 TPM= 4.25 Transcript Type= NA
chr19	42507306	42528509	42507306	42528509	-	ENST00000161559.10@CEACAM1	ENST00000161559.10	protein_coding	42528311,42527041,42521924,42521267,42518948,42512350,42511576,42510889,42507306	42528509,42527400,42522202,42521521,42519235,42512479,42511628,42510920,42509228	Gene ID= ENSG00000079385.21 TPM= 1.59 Transcript Type= protein_coding
chr19	42507304	42528446	42507304	42528446	-	ENST00000352591.9@CEACAM1	ENST00000352591.9	protein_coding	42528311,42527041,42521924,42521267,42512350,42511576,42510889,42507304	42528446,42527400,42522202,42521521,42512479,42511628,42510920,42509228	Gene ID= ENSG00000079385.21 TPM= 1.59 Transcript Type= protein_coding
chr19	43353659	43363172	43353659	43363172	+	ENST00000618265.4@CD177	ENST00000618265.4	protein_coding	43353659,43353853,43354207,43355661,43355992,43360265,43361143,43361445,43362088	43353766,43353993,43354392,43355783,43356108,43360405,43361328,43361579,43363172	Gene ID= ENSG00000204936.9 TPM= 1.06 Transcript Type= protein_coding
chr19	43475103	43504935	43475103	43504935	-	ENST00000292140.9@PHLDB3	ENST00000292140.9	protein_coding	43504589,43503906,43502101,43501734,43497748,43497118,43495495,43495256,43494702,43487024,43486780,43486609,43486266,43479377,43478047,43475103	43504935,43504132,43502283,43501871,43497876,43497279,43495620,43495339,43494815,43487123,43486870,43486696,43486322,43479593,43478132,43475544	Gene ID= ENSG00000176531.10 TPM= 3.19 Transcript Type= protein_coding
chr19	43501176	43504225	43501176	43504225	-	transcript4499.chr19.nnic@PHLDB3	transcript4499.chr19.nnic	protein_coding	43503906,43502101,43501734,43501176	43504225,43502283,43501871,43501343	Gene ID= ENSG00000176531.10 TPM= 2.12 Transcript Type= NA
chr19	43506719	43527250	43506719	43527250	-	transcript4506.chr19.nnic@ETHE1	transcript4506.chr19.nnic	protein_coding	43527097,43526515,43526201,43511437,43507944,43506719	43527250,43526659,43526349,43511566,43508060,43506902	Gene ID= ENSG00000105755.7 TPM= 2.12 Transcript Type= NA
chr19	43506719	43527244	43506719	43527244	-	ENST00000292147.6@ETHE1	ENST00000292147.6	protein_coding	43527097,43526515,43526201,43511437,43508775,43507944,43506719	43527244,43526659,43526349,43511566,43508864,43508060,43506902	Gene ID= ENSG00000105755.7 TPM= 13.81 Transcript Type= protein_coding
chr19	43543040	43576006	43543040	43576006	-	ENST00000262887.9@XRCC1	ENST00000262887.9	protein_coding	43575408,43574910,43560910,43554646,43553609,43553401,43552982,43552797,43552017,43551571,43546884,43546595,43546052,43545818,43544144,43543612,43543040	43576006,43575002,43561020,43554804,43553683,43553512,43553091,43552908,43552275,43551687,43546977,43546727,43546106,43545957,43544234,43543687,43543505	Gene ID= ENSG00000073050.11 TPM= 9.56 Transcript Type= protein_coding
chr19	43584369	43596135	43584369	43596135	-	ENST00000422989.5@IRGQ	ENST00000422989.5	protein_coding	43595982,43594809,43584369	43596135,43595340,43593367	Gene ID= ENSG00000167378.8 TPM= 196.5 Transcript Type= protein_coding
chr19	43596575	43599525	43596575	43599525	+	ENST00000528387.5@ZNF576	ENST00000528387.5	protein_coding	43596575,43597094,43598831	43596638,43597193,43599525	Gene ID= ENSG00000124444.15 TPM= 2.12 Transcript Type= protein_coding
chr19	43596595	43599414	43596595	43599414	+	ENST00000529930.1@ZNF576	ENST00000529930.1	protein_coding	43596595,43597097,43598831	43596743,43597193,43599414	Gene ID= ENSG00000124444.15 TPM= 8.5 Transcript Type= protein_coding
chr19	43607219	43619874	43607219	43619874	-	ENST00000300811.7@ZNF428	ENST00000300811.7	protein_coding	43619558,43614229,43607219	43619874,43614434,43608107	Gene ID= ENSG00000131116.11 TPM= 35.05 Transcript Type= protein_coding
chr19	43622368	43639839	43622368	43639839	-	ENST00000222374.2@CADM4	ENST00000222374.2	protein_coding	43639727,43627644,43627166,43626784,43626124,43625911,43625078,43624114,43622368	43639839,43627790,43627318,43626918,43626288,43626001,43625250,43624242,43623439	Gene ID= ENSG00000105767.2 TPM= 2.12 Transcript Type= protein_coding
chr19	43648580	43670350	43648580	43670350	-	ENST00000340093.7@PLAUR	ENST00000340093.7	protein_coding	43670066,43667581,43665316,43656479,43655439,43652225,43648580	43670350,43667691,43665459,43656640,43655573,43652371,43649143	Gene ID= ENSG00000011422.11 TPM= 9.56 Transcript Type= protein_coding
chr19	43646095	43670166	43646095	43670166	-	ENST00000339082.7@PLAUR	ENST00000339082.7	protein_coding	43670066,43667581,43665316,43656479,43655439,43652225,43646095	43670166,43667691,43665459,43656640,43655573,43652371,43646548	Gene ID= ENSG00000011422.11 TPM= 1.06 Transcript Type= protein_coding
chr19	43727992	43754990	43727992	43754990	-	ENST00000270066.10@SMG9	ENST00000270066.10	protein_coding	43754654,43750592,43747978,43747633,43747442,43744772,43740107,43738122,43737597,43734389,43733626,43733324,43732858,43727992	43754990,43750747,43748052,43747897,43747539,43744884,43740218,43738217,43737682,43734495,43733733,43733452,43733002,43731674	Gene ID= ENSG00000105771.13 TPM= 2.12 Transcript Type= protein_coding
chr19	43796241	43820634	43796241	43820634	-	ENST00000414615.6@LYPD5	ENST00000414615.6	protein_coding	43820540,43799706,43798812,43798455,43796241	43820634,43799834,43798988,43798601,43797829	Gene ID= ENSG00000159871.14 TPM= 1.06 Transcript Type= protein_coding
chr19	43827359	43851405	43827359	43851405	+	transcript4534.chr19.nic@ZNF283	transcript4534.chr19.nic	protein_coding	43827359,43828202,43831318,43835505,43837053,43846939	43827444,43828281,43831381,43835592,43837179,43851405	Gene ID= ENSG00000167637.16 TPM= 7.44 Transcript Type= NA
chr19	43891804	43901805	43891804	43901805	-	ENST00000587128.1@AC006213.2	ENST00000587128.1	lincRNA	43901037,43900868,43891804	43901805,43900954,43893140	Gene ID= ENSG00000267058.1 TPM= 1.06 Transcript Type= lincRNA
chr19	43984200	43998325	43984200	43998325	+	transcript4553.chr19.nnic@ZNF155	transcript4553.chr19.nnic	protein_coding	43984200,43988459,43991548,43991842,43996093,43998055	43984245,43988558,43991674,43991934,43997999,43998325	Gene ID= ENSG00000204920.10 TPM= 4.25 Transcript Type= NA
chr19	43996896	44002836	43996896	44002836	-	ENST00000586860.1@AC006213.1	ENST00000586860.1	antisense_RNA	44002624,43996896	44002836,43999232	Gene ID= ENSG00000266921.1 TPM= 1.06 Transcript Type= antisense_RNA
chr19	44094390	44095941	44094390	44095941	+	ENST00000589060.1@ZNF224	ENST00000589060.1	protein_coding	44094390	44095941	Gene ID= ENSG00000267680.5 TPM= 3.19 Transcript Type= retained_intron
chr19	44105463	44113145	44105463	44113145	-	ENST00000592946.1@AC021092.1	ENST00000592946.1	antisense_RNA	44112822,44105463	44113145,44108337	Gene ID= ENSG00000186019.10 TPM= 2.12 Transcript Type= antisense_RNA
chr19	44159906	44162365	44159906	44162365	+	transcript4575.chr19.nnic@NA	transcript4575.chr19.nnic	NA	44159906	44162365	Gene ID= novel_gene_chr19_4576 TPM= 3.19 Transcript Type= NA
chr19	44165093	44173813	44165093	44173813	+	transcript4578.chr19.nnic@ZNF226	transcript4578.chr19.nnic	protein_coding	44165093,44165588,44165757,44170035,44172088,44172860,44173452	44165142,44165613,44165807,44170095,44172214,44172952,44173813	Gene ID= ENSG00000167380.16 TPM= 4.25 Transcript Type= NA
chr19	44165074	44172758	44165074	44172758	+	transcript4586.chr19.nic@ZNF226	transcript4586.chr19.nic	protein_coding	44165074,44165757,44170035,44172088	44165142,44165807,44170095,44172758	Gene ID= ENSG00000167380.16 TPM= 3.19 Transcript Type= NA
chr19	44165104	44175429	44165104	44175429	+	ENST00000300823.10@ZNF226	ENST00000300823.10	protein_coding	44165104,44165757,44170035,44172088,44172860,44174984	44165142,44165807,44170095,44172214,44172952,44175429	Gene ID= ENSG00000167380.16 TPM= 1.06 Transcript Type= protein_coding
chr19	44165096	44177683	44165096	44177683	+	ENST00000337433.9@ZNF226	ENST00000337433.9	protein_coding	44165096,44165757,44170035,44172088,44172860,44175498	44165142,44165807,44170095,44172214,44172952,44177683	Gene ID= ENSG00000167380.16 TPM= 2.12 Transcript Type= protein_coding
chr19	44212538	44237268	44212538	44237268	+	ENST00000313040.11@ZNF227	ENST00000313040.11	protein_coding	44212538,44213090,44217791,44228446,44229733,44234702	44212585,44213244,44217852,44228572,44229816,44237268	Gene ID= ENSG00000131115.15 TPM= 2.12 Transcript Type= protein_coding
chr19	44212528	44237267	44212528	44237267	+	ENST00000621083.4@ZNF227	ENST00000621083.4	protein_coding	44212528,44213087,44217791,44228446,44229733,44234702	44212585,44213244,44217852,44228572,44229816,44237267	Gene ID= ENSG00000131115.15 TPM= 2.12 Transcript Type= protein_coding
chr19	44216960	44220845	44216960	44220845	-	transcript4591.chr19.nnic@NA	transcript4591.chr19.nnic	NA	44216960	44220845	Gene ID= novel_gene_chr19_4592 TPM= 5.31 Transcript Type= NA
chr19	44259886	44275901	44259886	44275901	+	transcript4593.chr19.nic@ZNF233	transcript4593.chr19.nic	protein_coding	44259886,44264314,44266198,44266866,44272899	44259938,44264375,44266324,44266961,44275901	Gene ID= ENSG00000159915.12 TPM= 2.12 Transcript Type= NA
chr19	44286350	44305025	44286350	44305025	-	ENST00000291182.8@ZNF235	ENST00000291182.8	protein_coding	44304971,44303390,44299606,44298808,44286350	44305025,44303452,44299732,44298903,44289196	Gene ID= ENSG00000159917.15 TPM= 3.19 Transcript Type= protein_coding
chr19	44326555	44356674	44326555	44356674	-	ENST00000354340.8@ZNF112	ENST00000354340.8	protein_coding	44356626,44340416,44336623,44326555	44356674,44340542,44336718,44329936	Gene ID= ENSG00000062370.16 TPM= 4.25 Transcript Type= protein_coding
chr19	44426255	44448446	44426255	44448446	-	ENST00000620012.4@ZNF229	ENST00000620012.4	protein_coding	44448309,44447513,44442814,44442563,44431767,44426255	44448446,44447600,44443024,44442621,44432366,44430542	Gene ID= ENSG00000278318.4 TPM= 3.19 Transcript Type= nonsense_mediated_decay
chr19	44643798	44663583	44643798	44663583	+	ENST00000425690.7@PVR	ENST00000425690.7	protein_coding	44643798,44647223,44649809,44653900,44657762,44658742,44661292,44661740	44644175,44647570,44650105,44654017,44657910,44658900,44661323,44663583	Gene ID= ENSG00000073008.14 TPM= 41.42 Transcript Type= protein_coding
chr19	44643798	44663583	44643798	44663583	+	ENST00000344956.8@PVR	ENST00000344956.8	protein_coding	44643798,44647223,44649809,44653900,44657762,44661292,44661740	44644175,44647570,44650105,44654017,44657910,44661323,44663583	Gene ID= ENSG00000073008.14 TPM= 15.93 Transcript Type= protein_coding
chr19	44643834	44663583	44643834	44663583	+	transcript4619.chr19.nic@PVR	transcript4619.chr19.nic	protein_coding	44643834,44647223,44649809,44653900,44661292,44661740	44644175,44647570,44650105,44654017,44661323,44663583	Gene ID= ENSG00000073008.14 TPM= 19.12 Transcript Type= NA
chr19	44643910	44663583	44643910	44663583	+	ENST00000403059.8@PVR	ENST00000403059.8	protein_coding	44643910,44647223,44649809,44653900,44657762,44658742,44661292,44661740	44644175,44647570,44650105,44654017,44657910,44658765,44661323,44663583	Gene ID= ENSG00000073008.14 TPM= 15.93 Transcript Type= protein_coding
chr19	44650571	44651576	44650571	44651576	-	transcript4624.chr19.nnic@NA	transcript4624.chr19.nnic	NA	44650571	44651576	Gene ID= novel_gene_chr19_4625 TPM= 5.31 Transcript Type= NA
chr19	44659689	44663582	44659689	44663582	+	transcript4622.chr19.nnic@NA	transcript4622.chr19.nnic	NA	44659689	44663582	Gene ID= novel_gene_chr19_4623 TPM= 18.06 Transcript Type= NA
chr19	44671452	44684359	44671452	44684359	+	ENST00000358777.8@CEACAM19	ENST00000358777.8	protein_coding	44671452,44672596,44676271,44678853,44680288,44681227,44682567,44683437	44671986,44672964,44676421,44678936,44680334,44681312,44682620,44684359	Gene ID= ENSG00000186567.12 TPM= 4.25 Transcript Type= protein_coding
chr19	44748547	44760044	44748547	44760044	+	ENST00000164227.9@BCL3	ENST00000164227.9	protein_coding	44748547,44751227,44756232,44757017,44757327,44757646,44758246,44758724,44759428	44749046,44751380,44756340,44757221,44757415,44757723,44758413,44758841,44760044	Gene ID= ENSG00000069399.14 TPM= 35.05 Transcript Type= protein_coding
chr19	44809103	44821414	44809103	44821414	+	ENST00000270233.10@BCAM	ENST00000270233.10	protein_coding	44809103,44811225,44812163,44812478,44813250,44813438,44814152,44814604,44818522,44818741,44819056,44819346,44819582,44820705,44820916	44809206,44811346,44812391,44812548,44813346,44813620,44814288,44814760,44818637,44818882,44819192,44819490,44819726,44820822,44821414	Gene ID= ENSG00000187244.10 TPM= 41.42 Transcript Type= protein_coding
chr19	44846310	44878938	44846310	44878938	+	transcript4641.chr19.nic@NECTIN2	transcript4641.chr19.nic	protein_coding	44846310,44865271,44871853,44873916,44874330,44878553	44846613,44865660,44872149,44874033,44874478,44878938	Gene ID= ENSG00000130202.9 TPM= 20.18 Transcript Type= NA
chr19	44891220	44903688	44891220	44903688	+	ENST00000405636.6@TOMM40	ENST00000405636.6	protein_coding	44891220,44891407,44892393,44892837,44893780,44893961,44900730,44901028,44901208,44903030	44891314,44891689,44892460,44892929,44893881,44894066,44900852,44901104,44901310,44903688	Gene ID= ENSG00000130204.12 TPM= 183.75 Transcript Type= protein_coding
chr19	44891236	44903628	44891236	44903628	+	ENST00000426677.6@TOMM40	ENST00000426677.6	protein_coding	44891236,44892393,44892837,44893780,44893961,44900730,44901028,44901208,44903030	44891689,44892460,44892929,44893881,44894066,44900852,44901104,44901310,44903628	Gene ID= ENSG00000130204.12 TPM= 13.81 Transcript Type= protein_coding
chr19	44905754	44909393	44905754	44909393	+	ENST00000252486.8@APOE	ENST00000252486.8	protein_coding	44905754,44906602,44907760,44908533	44905841,44906667,44907952,44909393	Gene ID= ENSG00000130203.9 TPM= 33.99 Transcript Type= protein_coding
chr19	44914247	44919342	44914247	44919342	+	ENST00000588750.5@APOC1	ENST00000588750.5	protein_coding	44914247,44914672,44914872,44916190,44919173	44914489,44914733,44914949,44916325,44919342	Gene ID= ENSG00000130208.9 TPM= 1.06 Transcript Type= protein_coding
chr19	44955246	44993341	44955246	44993341	+	ENST00000337392.9@CLPTM1	ENST00000337392.9	protein_coding	44955246,44961963,44973087,44974439,44977343,44985218,44986455,44987179,44988080,44990395,44990850,44991238,44992233,44992611	44955467,44962075,44973210,44974597,44977460,44985303,44986575,44987423,44988173,44990585,44990945,44991373,44992400,44993341	Gene ID= ENSG00000104853.15 TPM= 166.76 Transcript Type= protein_coding
chr19	45001430	45038194	45001430	45038194	+	ENST00000221452.12@RELB	ENST00000221452.12	protein_coding	45001430,45002949,45009814,45011936,45022053,45025329,45025606,45028888,45032534,45034244,45034451,45037405	45001685,45002996,45009822,45012276,45022210,45025420,45025737,45028992,45032749,45034312,45034528,45038194	Gene ID= ENSG00000104856.13 TPM= 14.87 Transcript Type= protein_coding
chr19	45001461	45038159	45001461	45038159	+	ENST00000505236.1@RELB	ENST00000505236.1	protein_coding	45001461,45002949,45011936,45022053,45025329,45025606,45028888,45032534,45034244,45034451,45037405	45001685,45002996,45012276,45022210,45025420,45025737,45028992,45032749,45034312,45034528,45038159	Gene ID= ENSG00000104856.13 TPM= 4.25 Transcript Type= protein_coding
chr19	45039040	45070956	45039040	45070956	+	ENST00000221455.7@CLASRP	ENST00000221455.7	protein_coding	45039040,45040184,45052071,45052791,45053098,45056450,45057750,45059268,45060389,45060554,45062154,45064012,45064343,45067337,45068015,45068420,45069066,45069202,45070022,45070537,45070803	45039108,45040311,45052168,45052892,45053177,45056534,45057898,45059364,45060467,45060627,45062195,45064227,45064630,45067594,45068054,45068480,45069124,45069248,45070104,45070561,45070956	Gene ID= ENSG00000104859.14 TPM= 12.21 Transcript Type= protein_coding
chr19	45039065	45070956	45039065	45070956	+	ENST00000391952.7@CLASRP	ENST00000391952.7	protein_coding	45039065,45040184,45052071,45052791,45053098,45056450,45057750,45059268,45060389,45060554,45062154,45064012,45064343,45067337,45068015,45068420,45069066,45069202,45070022,45070537,45070803	45039108,45040311,45052168,45052892,45053177,45056534,45057898,45059364,45060467,45060627,45062195,45064227,45064630,45067594,45068058,45068480,45069124,45069248,45070104,45070561,45070956	Gene ID= ENSG00000104859.14 TPM= 13.28 Transcript Type= nonsense_mediated_decay
chr19	45071500	45076588	45071500	45076588	-	ENST00000303809.6@ZNF296	ENST00000303809.6	protein_coding	45076076,45075713,45071500	45076588,45075862,45072580	Gene ID= ENSG00000170684.8 TPM= 1.06 Transcript Type= protein_coding
chr19	45079262	45091524	45079262	45091524	+	ENST00000270257.8@GEMIN7	ENST00000270257.8	protein_coding	45079262,45079907,45090107	45079377,45080029,45091524	Gene ID= ENSG00000142252.10 TPM= 4.25 Transcript Type= protein_coding
chr19	45079195	45090869	45079195	45090869	+	ENST00000591607.1@GEMIN7	ENST00000591607.1	protein_coding	45079195,45090107	45079279,45090869	Gene ID= ENSG00000142252.10 TPM= 5.31 Transcript Type= protein_coding
chr19	45092962	45147285	45092962	45147285	+	ENST00000221462.8@PPP1R37	ENST00000221462.8	protein_coding	45092962,45138514,45140236,45140506,45141322,45142061,45142303,45143521,45144854,45145094,45145353,45146390,45146571	45093527,45138611,45140281,45140606,45141441,45142211,45142458,45143633,45144995,45145260,45146049,45146480,45147285	Gene ID= ENSG00000104866.10 TPM= 10.62 Transcript Type= protein_coding
chr19	45162928	45178237	45162928	45178237	-	ENST00000006275.8@TRAPPC6A	ENST00000006275.8	protein_coding	45178093,45165127,45164853,45164164,45163916,45162928	45178237,45165194,45164970,45164247,45164009,45163223	Gene ID= ENSG00000007255.10 TPM= 8.85 Transcript Type= protein_coding
chr19	45162928	45178237	45162928	45178237	-	ENST00000588062.5@TRAPPC6A	ENST00000588062.5	protein_coding	45178135,45164853,45164164,45163916,45162928	45178237,45164970,45164247,45164009,45163223	Gene ID= ENSG00000007255.10 TPM= 5.66 Transcript Type= protein_coding
chr19	45162933	45178237	45162933	45178237	-	ENST00000585934.1@TRAPPC6A	ENST00000585934.1	protein_coding	45178135,45165127,45164853,45164164,45163916,45162933	45178237,45165194,45164970,45164247,45164009,45163223	Gene ID= ENSG00000007255.10 TPM= 7.79 Transcript Type= protein_coding
chr19	45178745	45181801	45178745	45181801	+	ENST00000433642.2@BLOC1S3	ENST00000433642.2	protein_coding	45178745,45179288	45178831,45181801	Gene ID= ENSG00000189114.6 TPM= 38.24 Transcript Type= protein_coding
chr19	45212621	45245431	45212621	45245431	-	ENST00000413988.2@EXOC3L2	ENST00000413988.2	protein_coding	45245341,45238523,45234193,45231763,45228165,45227974,45227662,45224778,45218197,45217528,45216073,45212621	45245431,45239061,45234826,45231874,45228266,45228074,45227772,45224913,45218319,45217683,45216194,45213357	Gene ID= ENSG00000283632.2 TPM= 1.06 Transcript Type= protein_coding
chr19	45273135	45275085	45273135	45275085	-	transcript4702.chr19.nnic@NA	transcript4702.chr19.nnic	NA	45273135	45275085	Gene ID= novel_gene_chr19_4703 TPM= 2.12 Transcript Type= NA
chr19	45306414	45322977	45306414	45322977	-	ENST00000221476.3@CKM	ENST00000221476.3	protein_coding	45322821,45319521,45317825,45315465,45311749,45308409,45307461,45306414	45322977,45319731,45317979,45315597,45311920,45308532,45307650,45306928	Gene ID= ENSG00000104879.4 TPM= 12622.71 Transcript Type= protein_coding
chr19	45349837	45370618	45349837	45370618	-	ENST00000391945.8@ERCC2	ENST00000391945.8	protein_coding	45370536,45370133,45369070,45368930,45368630,45365042,45364838,45364424,45364235,45363986,45363743,45361524,45357630,45357474,45357270,45355665,45354730,45353242,45353083,45352746,45352506,45352209,45349837	45370618,45370232,45369147,45368992,45368743,45365158,45364954,45364547,45364331,45364119,45363911,45361642,45357699,45357543,45357371,45355728,45354851,45353334,45353155,45352816,45352649,45352352,45351721	Gene ID= ENSG00000104884.14 TPM= 5.31 Transcript Type= protein_coding
chr19	45379638	45393167	45379638	45393167	-	ENST00000587270.5@PPP1R13L	ENST00000587270.5	protein_coding	45391880,45386049,45385824,45385562,45382527,45379638	45393167,45386180,45385957,45385728,45382726,45380228	Gene ID= ENSG00000104881.15 TPM= 146.58 Transcript Type= retained_intron
chr19	45379634	45405038	45379634	45405038	-	ENST00000360957.9@PPP1R13L	ENST00000360957.9	protein_coding	45404999,45398264,45398005,45396545,45396338,45396168,45395436,45391880,45386049,45385824,45385562,45382527,45379634	45405038,45398339,45398147,45397058,45396436,45396259,45395886,45392340,45386180,45385957,45385728,45382726,45380228	Gene ID= ENSG00000104881.15 TPM= 92.41 Transcript Type= protein_coding
chr19	45406691	45409786	45406691	45409786	+	ENST00000589804.1@CD3EAP	ENST00000589804.1	protein_coding	45406691,45407094,45408133	45406724,45407235,45409786	Gene ID= ENSG00000117877.10 TPM= 1.06 Transcript Type= protein_coding
chr19	45407333	45424365	45407333	45424365	-	ENST00000300853.7@ERCC1	ENST00000300853.7	protein_coding	45423781,45423270,45421178,45420324,45419098,45416821,45414861,45413963,45413677,45407333	45424365,45423381,45421393,45420427,45419197,45416897,45414960,45414034,45413745,45409725	Gene ID= ENSG00000012061.15 TPM= 32.93 Transcript Type= protein_coding
chr19	45409616	45423594	45409616	45423594	-	transcript4791.chr19.nic@ERCC1	transcript4791.chr19.nic	protein_coding	45423270,45421178,45420324,45419098,45416821,45414861,45413963,45413677,45409616	45423594,45421393,45420427,45419197,45416897,45414960,45414034,45413745,45409725	Gene ID= ENSG00000012061.15 TPM= 32.93 Transcript Type= NA
chr19	45409616	45424349	45409616	45424349	-	transcript4793.chr19.nic@ERCC1	transcript4793.chr19.nic	protein_coding	45423823,45423270,45421178,45420324,45419098,45416821,45414861,45413677,45409616	45424349,45423381,45421393,45420427,45419197,45416897,45414960,45413745,45409725	Gene ID= ENSG00000012061.15 TPM= 5.31 Transcript Type= NA
chr19	45413436	45423928	45413436	45423928	-	transcript4797.chr19.nic@ERCC1	transcript4797.chr19.nic	protein_coding	45423781,45423270,45421178,45420324,45419098,45416821,45414861,45413963,45413436	45423928,45423381,45421393,45420427,45419197,45416897,45414960,45414034,45413745	Gene ID= ENSG00000012061.15 TPM= 4.78 Transcript Type= NA
chr19	45409616	45423521	45409616	45423521	-	transcript4800.chr19.nic@ERCC1	transcript4800.chr19.nic	protein_coding	45423270,45421178,45420324,45419098,45416821,45414861,45413677,45409616	45423521,45421393,45420427,45419197,45416897,45414960,45413745,45409725	Gene ID= ENSG00000012061.15 TPM= 4.25 Transcript Type= NA
chr19	45409614	45423839	45409614	45423839	-	ENST00000340192.11@ERCC1	ENST00000340192.11	protein_coding	45423781,45423270,45421178,45420324,45419098,45416821,45414861,45413677,45409614	45423839,45423381,45421393,45420427,45419197,45416897,45414960,45413745,45409725	Gene ID= ENSG00000012061.15 TPM= 6.37 Transcript Type= protein_coding
chr19	45413434	45423566	45413434	45423566	-	ENST00000013807.9@ERCC1	ENST00000013807.9	protein_coding	45423270,45421178,45420324,45419098,45416821,45414861,45413963,45413434	45423566,45421393,45420427,45419197,45416897,45414960,45414034,45413745	Gene ID= ENSG00000012061.15 TPM= 9.03 Transcript Type= protein_coding
chr19	45485294	45497055	45485294	45497055	-	ENST00000344680.8@RTN2	ENST00000344680.8	protein_coding	45496792,45495095,45494526,45494166,45489346,45488848,45488637,45488471,45486055,45485294	45497055,45495139,45495005,45494420,45489553,45488986,45488706,45488517,45486113,45485789	Gene ID= ENSG00000125744.11 TPM= 1.59 Transcript Type= protein_coding
chr19	45485294	45493267	45485294	45493267	-	ENST00000430715.6@RTN2	ENST00000430715.6	protein_coding	45493160,45489346,45488848,45488637,45488471,45486055,45485294	45493267,45489553,45488986,45488706,45488517,45486113,45485789	Gene ID= ENSG00000125744.11 TPM= 7.97 Transcript Type= protein_coding
chr19	45506590	45526983	45506590	45526983	+	transcript4827.chr19.nic@VASP	transcript4827.chr19.nic	protein_coding	45506590,45507562,45517663,45517929,45521322,45522168,45522340,45522718,45523644,45523841,45524097,45524570,45525946,45526140	45506887,45507776,45517834,45518094,45521406,45522217,45522581,45522818,45523695,45523877,45524142,45524660,45526003,45526983	Gene ID= ENSG00000125753.13 TPM= 37.18 Transcript Type= NA
chr19	45507416	45526983	45507416	45526983	+	ENST00000245932.10@VASP	ENST00000245932.10	protein_coding	45507416,45517663,45517929,45521322,45522168,45522340,45522718,45523644,45523841,45524097,45524570,45525946,45526140	45507776,45517834,45518094,45521406,45522217,45522581,45522818,45523695,45523877,45524142,45524660,45526003,45526983	Gene ID= ENSG00000125753.13 TPM= 55.23 Transcript Type= protein_coding
chr19	45546281	45584819	45546281	45584819	-	ENST00000263275.4@OPA3	ENST00000263275.4	protein_coding	45584623,45546281	45584819,45553911	Gene ID= ENSG00000125741.4 TPM= 8.5 Transcript Type= protein_coding
chr19	45589764	45602208	45589764	45602208	-	ENST00000323040.4@GPR4	ENST00000323040.4	protein_coding	45602095,45589764	45602208,45592697	Gene ID= ENSG00000177464.4 TPM= 10.62 Transcript Type= protein_coding
chr19	45609400	45639427	45609400	45639427	-	ENST00000245925.7@EML2	ENST00000245925.7	protein_coding	45639357,45638845,45638505,45634322,45633070,45632861,45629951,45626705,45624719,45621483,45621207,45619060,45617630,45616765,45616461,45615802,45614605,45613541,45609400	45639427,45638873,45638634,45634471,45633139,45632971,45630046,45626839,45624818,45621637,45621332,45619191,45617697,45616853,45616558,45615889,45614700,45613671,45609788	Gene ID= ENSG00000125746.16 TPM= 4.25 Transcript Type= protein_coding
chr19	45687454	45692333	45687454	45692333	-	ENST00000342669.7@SNRPD2	ENST00000342669.7	protein_coding	45691887,45688387,45687454	45692333,45688566,45687727	Gene ID= ENSG00000125743.10 TPM= 179.51 Transcript Type= protein_coding
chr19	45710629	45730904	45710629	45730904	-	ENST00000317683.3@FBXO46	ENST00000317683.3	protein_coding	45730849,45710629	45730904,45713573	Gene ID= ENSG00000177051.5 TPM= 4.25 Transcript Type= protein_coding
chr19	45764785	45769226	45764785	45769226	-	ENST00000317578.6@SIX5	ENST00000317578.6	protein_coding	45768042,45766350,45764785	45769226,45767155,45766111	Gene ID= ENSG00000177045.7 TPM= 35.05 Transcript Type= protein_coding
chr19	45769717	45782793	45769717	45782793	-	transcript4864.chr19.nnic@DMPK	transcript4864.chr19.nnic	protein_coding	45782193,45779778,45779439,45779264,45778493,45778127,45777667,45777327,45774949,45772641,45771771,45771568,45771350,45770971,45770250,45769717	45782793,45779869,45779522,45779359,45778641,45778220,45777873,45777590,45775034,45772752,45771928,45771665,45771396,45771056,45770640,45770205	Gene ID= ENSG00000104936.17 TPM= 53.31 Transcript Type= NA
chr19	45769717	45782533	45769717	45782533	-	transcript4884.chr19.nic@DMPK	transcript4884.chr19.nic	protein_coding	45782193,45779778,45779439,45779264,45778493,45778127,45777667,45777327,45774949,45772641,45771771,45771568,45771350,45770971,45769717	45782533,45779869,45779522,45779359,45778641,45778220,45777873,45777590,45775034,45772752,45771928,45771665,45771396,45771056,45770640	Gene ID= ENSG00000104936.17 TPM= 76.05 Transcript Type= NA
chr19	45769717	45782520	45769717	45782520	-	transcript4894.chr19.nnic@DMPK	transcript4894.chr19.nnic	protein_coding	45782193,45779778,45779439,45779264,45778493,45778127,45777667,45777327,45774949,45772641,45771771,45771568,45770250,45769717	45782520,45779869,45779522,45779359,45778641,45778220,45777873,45777590,45775034,45772752,45771928,45771665,45770640,45770205	Gene ID= ENSG00000104936.17 TPM= 66.71 Transcript Type= NA
chr19	45769717	45782527	45769717	45782527	-	transcript4915.chr19.nic@DMPK	transcript4915.chr19.nic	protein_coding	45782193,45779778,45779439,45779264,45778493,45778127,45777667,45777327,45774949,45772641,45771771,45771568,45769717	45782527,45779869,45779522,45779359,45778641,45778220,45777873,45777590,45775034,45772752,45771928,45771665,45770640	Gene ID= ENSG00000104936.17 TPM= 86.32 Transcript Type= NA
chr19	45769717	45782478	45769717	45782478	-	ENST00000291270.8@DMPK	ENST00000291270.8	protein_coding	45782193,45779778,45779439,45779264,45778493,45778127,45777667,45777327,45774949,45772641,45771771,45771568,45771350,45770971,45769717	45782478,45779869,45779522,45779359,45778641,45778220,45777873,45777590,45775034,45772752,45771928,45771665,45771396,45771060,45770640	Gene ID= ENSG00000104936.17 TPM= 134.47 Transcript Type= protein_coding
chr19	45769736	45782479	45769736	45782479	-	ENST00000447742.6@DMPK	ENST00000447742.6	protein_coding	45782193,45779778,45779439,45779264,45778493,45778127,45777667,45777342,45774949,45772641,45771771,45771568,45771350,45770971,45769736	45782479,45779869,45779522,45779359,45778641,45778220,45777873,45777590,45775034,45772752,45771928,45771665,45771396,45771060,45770640	Gene ID= ENSG00000104936.17 TPM= 22.31 Transcript Type= protein_coding
chr19	45782984	45792845	45782984	45792845	-	transcript4950.chr19.nic@DMWD	transcript4950.chr19.nic	protein_coding	45792316,45790905,45785594,45782984	45792845,45791087,45786871,45784715	Gene ID= ENSG00000185800.11 TPM= 5.31 Transcript Type= NA
chr19	45783730	45792793	45783730	45792793	-	transcript4958.chr19.nic@DMWD	transcript4958.chr19.nic	protein_coding	45792316,45790905,45783730	45792793,45791087,45786871	Gene ID= ENSG00000185800.11 TPM= 5.31 Transcript Type= NA
chr19	45789400	45792845	45789400	45792845	-	transcript4963.chr19.nnic@DMWD	transcript4963.chr19.nnic	protein_coding	45792316,45790905,45789400	45792845,45791087,45790307	Gene ID= ENSG00000185800.11 TPM= 14.16 Transcript Type= NA
chr19	45782947	45792802	45782947	45792802	-	ENST00000377735.7@DMWD	ENST00000377735.7	protein_coding	45792316,45790905,45785594,45782947	45792802,45791087,45786871,45784290	Gene ID= ENSG00000185800.11 TPM= 5.58 Transcript Type= protein_coding
chr19	45783009	45792802	45783009	45792802	-	ENST00000270223.6@DMWD	ENST00000270223.6	protein_coding	45792316,45790905,45785594,45784641,45783009	45792802,45791087,45786871,45784715,45784290	Gene ID= ENSG00000185800.11 TPM= 43.81 Transcript Type= protein_coding
chr19	45815435	45863290	45815435	45863290	-	ENST00000245934.11@SYMPK	ENST00000245934.11	protein_coding	45863058,45854391,45854175,45852482,45852312,45848750,45847752,45844030,45842250,45838461,45835078,45831384,45830054,45828970,45827837,45827510,45826226,45825171,45823767,45823372,45822756,45821384,45817959,45816798,45816482,45815851,45815435	45863290,45854507,45854240,45852535,45852385,45848876,45848001,45844200,45842489,45838615,45835228,45831588,45830204,45829205,45827918,45827623,45826373,45825331,45823875,45823472,45822846,45821485,45818146,45816974,45816577,45816183,45815697	Gene ID= ENSG00000125755.18 TPM= 36.11 Transcript Type= protein_coding
chr19	45850390	45863165	45850390	45863165	-	transcript4974.chr19.nic@SYMPK	transcript4974.chr19.nic	protein_coding	45863058,45854391,45854175,45852482,45850390	45863165,45854507,45854240,45852535,45852385	Gene ID= ENSG00000125755.18 TPM= 3.19 Transcript Type= NA
chr19	45831170	45863132	45831170	45863132	-	ENST00000598896.5@SYMPK	ENST00000598896.5	protein_coding	45863058,45854391,45854175,45852482,45852312,45848750,45847752,45844030,45842250,45838461,45835078,45831170	45863132,45854507,45854240,45852535,45852385,45848876,45848001,45844200,45842489,45838615,45835228,45831588	Gene ID= ENSG00000125755.18 TPM= 3.19 Transcript Type= retained_intron
chr19	45883607	45886170	45883607	45886170	-	ENST00000302165.4@IRF2BP1	ENST00000302165.4	protein_coding	45883607	45886170	Gene ID= ENSG00000170604.4 TPM= 45.67 Transcript Type= protein_coding
chr19	45936367	45938620	45936367	45938620	-	transcript4975.chr19.nnic@NA	transcript4975.chr19.nnic	NA	45936367	45938620	Gene ID= novel_gene_chr19_4976 TPM= 2.12 Transcript Type= NA
chr19	45995471	46018615	45995471	46018615	+	transcript4981.chr19.nic@CCDC61	transcript4981.chr19.nic	protein_coding	45995471,45996245,46003008,46003419,46006559,46008140,46015049,46015345,46016054,46016318,46016694,46016991,46017247,46018078,46018290	45995504,45996401,46003166,46003501,46006716,46008301,46015259,46015427,46016223,46016393,46016833,46017069,46017304,46018150,46018615	Gene ID= ENSG00000104983.8 TPM= 3.19 Transcript Type= NA
chr19	45995471	46003501	45995471	46003501	+	ENST00000594672.5@CCDC61	ENST00000594672.5	protein_coding	45995471,45996245,46003008,46003419	45995504,45996401,46003166,46003501	Gene ID= ENSG00000104983.8 TPM= 1.06 Transcript Type= protein_coding
chr19	45995467	46018616	45995467	46018616	+	ENST00000595358.5@CCDC61	ENST00000595358.5	protein_coding	45995467,46003008,46003419,46006559,46008140,46015049,46015345,46016054,46016318,46016694,46016991,46017247,46018078,46018290	45995504,46003166,46003501,46006716,46008301,46015259,46015427,46016223,46016393,46016833,46017069,46017304,46018150,46018616	Gene ID= ENSG00000104983.8 TPM= 18.06 Transcript Type= protein_coding
chr19	46297041	46338538	46297041	46338538	+	transcript4987.chr19.nnic@HIF3A	transcript4987.chr19.nnic	protein_coding	46297041,46298383,46303898,46305245,46308221,46308663,46309151,46312161,46312506,46320443,46321776,46325535,46329207,46331156,46334905,46338227	46297102,46298514,46304088,46305390,46308305,46308775,46309359,46312267,46312653,46320561,46321966,46325639,46329478,46331273,46334986,46338538	Gene ID= ENSG00000124440.15 TPM= 7.79 Transcript Type= NA
chr19	46297041	46338538	46297041	46338538	+	transcript4992.chr19.nic@HIF3A	transcript4992.chr19.nic	protein_coding	46297041,46303898,46305245,46308221,46308663,46309151,46312161,46312506,46320443,46321776,46325535,46329207,46331156,46334905,46338227	46297102,46304088,46305390,46308305,46308775,46309359,46312267,46312653,46320561,46321966,46325639,46329478,46331273,46334986,46338538	Gene ID= ENSG00000124440.15 TPM= 12.03 Transcript Type= NA
chr19	46297041	46338538	46297041	46338538	+	transcript4994.chr19.nic@HIF3A	transcript4994.chr19.nic	protein_coding	46297041,46303898,46308221,46308663,46309151,46312161,46312506,46320443,46321776,46325535,46329207,46331156,46334905,46338227	46297102,46304088,46308305,46308775,46309359,46312267,46312653,46320561,46321966,46325639,46329478,46331273,46334986,46338538	Gene ID= ENSG00000124440.15 TPM= 5.66 Transcript Type= NA
chr19	46315658	46316822	46315658	46316822	+	transcript5011.chr19.nnic@NA	transcript5011.chr19.nnic	NA	46315658	46316822	Gene ID= novel_gene_chr19_5012 TPM= 3.19 Transcript Type= NA
chr19	46336710	46339213	46336710	46339213	+	transcript5009.chr19.nnic@NA	transcript5009.chr19.nnic	NA	46336710	46339213	Gene ID= novel_gene_chr19_5010 TPM= 3.19 Transcript Type= NA
chr19	46346994	46390852	46346994	46390852	+	ENST00000012443.8@PPP5C	ENST00000012443.8	protein_coding	46346994,46353748,46375604,46376453,46383411,46383780,46384804,46387093,46387366,46388408,46388553,46390051,46390284	46347217,46353989,46375751,46376574,46383476,46383878,46384909,46387235,46387453,46388448,46388731,46390132,46390852	Gene ID= ENSG00000011485.14 TPM= 221.99 Transcript Type= protein_coding
chr19	46410372	46413584	46410372	46413584	-	ENST00000307522.3@CCDC8	ENST00000307522.3	protein_coding	46410372	46413584	Gene ID= ENSG00000169515.5 TPM= 38.24 Transcript Type= protein_coding
chr19	46466498	46471563	46466498	46471563	-	ENST00000313683.14@PNMA8A	ENST00000313683.14	protein_coding	46471337,46469733,46466498	46471563,46471114,46468577	Gene ID= ENSG00000182013.17 TPM= 11.68 Transcript Type= protein_coding
chr19	46491841	46494166	46491841	46494166	-	transcript5021.chr19.nnic@NA	transcript5021.chr19.nnic	NA	46491841	46494166	Gene ID= novel_gene_chr19_5022 TPM= 4.25 Transcript Type= NA
chr19	46601309	46609275	46601309	46609275	+	ENST00000477244.5@CALM3	ENST00000477244.5	protein_coding	46601309,46605827,46608199,46608482,46608846,46609125	46601437,46605857,46608340,46608588,46608981,46609275	Gene ID= ENSG00000160014.16 TPM= 236.86 Transcript Type= processed_transcript
chr19	46604549	46606882	46604549	46606882	-	transcript5038.chr19.nnic@NA	transcript5038.chr19.nnic	NA	46604549	46606882	Gene ID= novel_gene_chr19_5039 TPM= 6.37 Transcript Type= NA
chr19	46620468	46625075	46620468	46625075	-	transcript5040.chr19.nnic@PTGIR	transcript5040.chr19.nnic	protein_coding	46624997,46623458,46620468	46625075,46624237,46621637	Gene ID= ENSG00000160013.8 TPM= 6.9 Transcript Type= NA
chr19	46620468	46625118	46620468	46625118	-	ENST00000291294.6@PTGIR	ENST00000291294.6	protein_coding	46624997,46623458,46620468	46625118,46624237,46621672	Gene ID= ENSG00000160013.8 TPM= 15.4 Transcript Type= protein_coding
chr19	46647612	46661138	46647612	46661138	-	ENST00000391916.6@DACT3	ENST00000391916.6	protein_coding	46660816,46652979,46652660,46647612	46661138,46653075,46652812,46649872	Gene ID= ENSG00000197380.10 TPM= 40.36 Transcript Type= protein_coding
chr19	46674317	46717127	46674317	46717127	-	ENST00000433867.5@PRKD2	ENST00000433867.5	protein_coding	46716815,46716131,46713863,46710907,46704495,46704169,46701035,46700799,46697733,46697157,46693875,46691933,46691735,46690600,46689537,46681650,46678396,46675033,46674317	46717127,46716535,46714001,46711038,46704649,46704391,46701112,46700952,46697850,46697234,46694133,46691985,46691807,46690706,46689698,46681748,46678663,46675118,46674735	Gene ID= ENSG00000105287.12 TPM= 12.75 Transcript Type= protein_coding
chr19	46674320	46714324	46674320	46714324	-	ENST00000600194.5@PRKD2	ENST00000600194.5	protein_coding	46713863,46710907,46704495,46704169,46701035,46700799,46697733,46697157,46693875,46691933,46691735,46690600,46689537,46681650,46678396,46675033,46674320	46714324,46711038,46704649,46704391,46701112,46700952,46697850,46697234,46694133,46691985,46691807,46690706,46689698,46681748,46678663,46675118,46674735	Gene ID= ENSG00000105287.12 TPM= 4.25 Transcript Type= protein_coding
chr19	46719507	46746480	46719507	46746480	-	ENST00000263280.10@STRN4	ENST00000263280.10	protein_coding	46746149,46738785,46738164,46736823,46733039,46730732,46728618,46727894,46727452,46725473,46725332,46724807,46723114,46722810,46722242,46721986,46720536,46719507	46746480,46738888,46738237,46736901,46733236,46730873,46728777,46728007,46727546,46725648,46725379,46724928,46723284,46722950,46722340,46722072,46720771,46720338	Gene ID= ENSG00000090372.14 TPM= 16.99 Transcript Type= protein_coding
chr19	46719511	46746881	46719511	46746881	-	ENST00000391910.7@STRN4	ENST00000391910.7	protein_coding	46746149,46738785,46738164,46736823,46733039,46730732,46728618,46727894,46727452,46725473,46725332,46724807,46723114,46722810,46722242,46721986,46720536,46719511	46746881,46738888,46738237,46736901,46733236,46730873,46728777,46728007,46727567,46725648,46725379,46724928,46723284,46722950,46722340,46722072,46720771,46720338	Gene ID= ENSG00000090372.14 TPM= 38.77 Transcript Type= protein_coding
chr19	46719511	46746247	46719511	46746247	-	transcript5066.chr19.nic@STRN4	transcript5066.chr19.nic	protein_coding	46746149,46738785,46738164,46736823,46733039,46730732,46728618,46727894,46727452,46725473,46725332,46724807,46723114,46722810,46722242,46721986,46720536,46719511	46746247,46738888,46738237,46736901,46733236,46730873,46728777,46728007,46727691,46725648,46725379,46724928,46723284,46722950,46722340,46722072,46720771,46720338	Gene ID= ENSG00000090372.14 TPM= 12.21 Transcript Type= NA
chr19	46721263	46724273	46721263	46724273	+	transcript5087.chr19.nnic@NA	transcript5087.chr19.nnic	NA	46721263	46724273	Gene ID= novel_gene_chr19_5088 TPM= 8.5 Transcript Type= NA
chr19	46746046	46758485	46746046	46758485	+	ENST00000318584.9@FKRP	ENST00000318584.9	protein_coding	46746046,46748027,46748515,46755412	46746090,46748088,46748665,46758485	Gene ID= ENSG00000181027.10 TPM= 20.18 Transcript Type= protein_coding
chr19	46774883	46788594	46774883	46788594	-	ENST00000542575.6@SLC1A5	ENST00000542575.6	protein_coding	46787400,46784517,46784097,46782383,46778675,46777211,46776975,46774883	46788594,46784559,46784144,46782549,46778908,46777405,46777109,46775747	Gene ID= ENSG00000105281.12 TPM= 9.56 Transcript Type= protein_coding
chr19	46838167	46850992	46838167	46850992	-	ENST00000263270.10@AP2S1	ENST00000263270.10	protein_coding	46850764,46845993,46839465,46838740,46838167	46850992,46846142,46839578,46838799,46838548	Gene ID= ENSG00000042753.11 TPM= 71.16 Transcript Type= protein_coding
chr19	46838158	46850834	46838158	46850834	-	ENST00000593442.5@AP2S1	ENST00000593442.5	protein_coding	46850764,46839465,46838740,46838158	46850834,46839578,46838799,46838548	Gene ID= ENSG00000042753.11 TPM= 3.19 Transcript Type= protein_coding
chr19	46838136	46850777	46838136	46850777	-	ENST00000352203.8@AP2S1	ENST00000352203.8	protein_coding	46850764,46845993,46839465,46838740,46838136	46850777,46846142,46839620,46838799,46838548	Gene ID= ENSG00000042753.11 TPM= 4.25 Transcript Type= protein_coding
chr19	46993291	47001425	46993291	47001425	+	transcript5097.chr19.nnic@ARHGAP35	transcript5097.chr19.nnic	protein_coding	46993291,46999304,47000331	46993542,46999409,47001425	Gene ID= ENSG00000160007.18 TPM= 9.56 Transcript Type= NA
chr19	47001829	47004489	47001829	47004489	+	transcript5098.chr19.nnic@NA	transcript5098.chr19.nnic	NA	47001829	47004489	Gene ID= novel_gene_chr19_5099 TPM= 8.5 Transcript Type= NA
chr19	47045907	47048630	47045907	47048630	-	ENST00000253047.6@TMEM160	ENST00000253047.6	protein_coding	47048407,47046593,47045907	47048630,47046685,47046252	Gene ID= ENSG00000130748.6 TPM= 36.11 Transcript Type= protein_coding
chr19	47064187	47113752	47064187	47113752	-	ENST00000253048.9@ZC3H4	ENST00000253048.9	protein_coding	47113720,47112424,47094389,47093970,47089967,47086384,47085318,47085056,47084345,47082184,47081513,47072352,47071778,47069092,47064187	47113752,47112589,47094608,47094080,47090189,47086538,47085414,47085195,47084455,47082295,47081622,47072713,47072121,47069343,47067869	Gene ID= ENSG00000130749.9 TPM= 40.36 Transcript Type= protein_coding
chr19	47130831	47210187	47130831	47210187	+	transcript5108.chr19.nnic@SAE1	transcript5108.chr19.nnic	protein_coding	47130831,47143494,47150202,47152898,47155114,47169818,47197233,47203671,47205104,47209159	47131028,47143605,47150375,47153040,47155213,47169923,47197377,47203740,47205129,47210187	Gene ID= ENSG00000142230.11 TPM= 10.62 Transcript Type= NA
chr19	47130863	47210191	47130863	47210191	+	ENST00000270225.11@SAE1	ENST00000270225.11	protein_coding	47130863,47143494,47150202,47152898,47155114,47169818,47197233,47203671,47209159	47131028,47143605,47150375,47153040,47155213,47169923,47197377,47203740,47210191	Gene ID= ENSG00000142230.11 TPM= 105.15 Transcript Type= protein_coding
chr19	47256459	47271953	47256459	47271953	+	ENST00000221922.10@CCDC9	ENST00000221922.10	protein_coding	47256459,47258330,47258559,47260321,47260588,47264603,47264773,47266611,47270407,47270553,47271082,47271274	47256609,47258403,47258663,47260422,47260839,47264686,47264946,47266792,47270453,47270688,47271187,47271953	Gene ID= ENSG00000105321.12 TPM= 7.44 Transcript Type= protein_coding
chr19	47277827	47297118	47277827	47297118	+	transcript5122.chr19.nnic@C5AR1	transcript5122.chr19.nnic	protein_coding	47277827,47280040,47280251,47281090,47289998,47291978,47296600	47277870,47280159,47280462,47281207,47290061,47292173,47297118	Gene ID= ENSG00000197405.7 TPM= 5.31 Transcript Type= NA
chr19	47349281	47382704	47349281	47382704	+	ENST00000328771.8@DHX34	ENST00000328771.8	protein_coding	47349281,47352754,47355039,47357866,47359968,47362476,47366981,47372730,47373599,47375466,47375924,47376443,47377100,47379710,47380816,47381186,47381980	47349352,47353735,47355350,47358120,47360070,47362693,47367155,47372923,47373700,47375708,47376097,47376560,47377206,47379985,47380992,47381324,47382704	Gene ID= ENSG00000134815.18 TPM= 2.12 Transcript Type= protein_coding
chr19	47475144	47484268	47475144	47484268	-	ENST00000338134.7@KPTN	ENST00000338134.7	protein_coding	47483935,47483502,47483295,47483161,47480958,47480760,47480298,47479863,47477706,47476803,47476532,47475144	47484268,47483584,47483379,47483215,47481033,47480833,47480407,47479940,47477781,47476938,47476714,47475544	Gene ID= ENSG00000118162.13 TPM= 13.81 Transcript Type= protein_coding
chr19	47484282	47496382	47484282	47496382	+	ENST00000593284.5@NAPA-AS1	ENST00000593284.5	antisense_RNA	47484282,47493447,47495028	47484524,47493601,47496382	Gene ID= ENSG00000268061.5 TPM= 4.25 Transcript Type= antisense_RNA
chr19	47487640	47515091	47487640	47515091	-	transcript5142.chr19.nnic@NAPA	transcript5142.chr19.nnic	protein_coding	47514843,47503423,47500633,47495550,47493416,47493119,47492961,47492015,47490788,47489711,47487856,47487640	47515091,47503502,47500749,47495596,47493493,47493174,47493045,47492119,47490856,47489761,47488389,47487801	Gene ID= ENSG00000105402.7 TPM= 7.62 Transcript Type= NA
chr19	47487642	47515091	47487642	47515091	-	transcript5145.chr19.nic@NAPA	transcript5145.chr19.nic	protein_coding	47514843,47503423,47500633,47495550,47493416,47493119,47492961,47492015,47490788,47489711,47488235,47487642	47515091,47503502,47500749,47495596,47493493,47493174,47493045,47492119,47490856,47489761,47488389,47487890	Gene ID= ENSG00000105402.7 TPM= 17.18 Transcript Type= NA
chr19	47487637	47515240	47487637	47515240	-	ENST00000263354.7@NAPA	ENST00000263354.7	protein_coding	47514843,47503423,47500633,47495550,47493416,47493119,47492961,47492015,47490788,47489711,47487637	47515240,47503502,47500749,47495596,47493493,47493174,47493045,47492119,47490856,47489761,47488389	Gene ID= ENSG00000105402.7 TPM= 183.93 Transcript Type= protein_coding
chr19	47487642	47492044	47487642	47492044	-	ENST00000594217.5@NAPA	ENST00000594217.5	protein_coding	47492015,47490788,47489711,47488235,47487642	47492044,47490856,47489761,47488389,47487890	Gene ID= ENSG00000105402.7 TPM= 4.25 Transcript Type= nonsense_mediated_decay
chr19	47487680	47515058	47487680	47515058	-	ENST00000594001.5@NAPA	ENST00000594001.5	protein_coding	47514843,47495550,47493416,47493119,47492961,47492015,47490788,47489711,47487680	47515058,47495596,47493493,47493174,47493045,47492119,47490856,47489761,47488389	Gene ID= ENSG00000105402.7 TPM= 2.66 Transcript Type= nonsense_mediated_decay
chr19	47497620	47499922	47497620	47499922	+	transcript5161.chr19.nnic@NA	transcript5161.chr19.nnic	NA	47497620	47499922	Gene ID= novel_gene_chr19_5162 TPM= 2.12 Transcript Type= NA
chr19	47520685	47522240	47520685	47522240	-	transcript5164.chr19.nic@ZNF541	transcript5164.chr19.nic	protein_coding	47521854,47521479,47520685	47522240,47521654,47521377	Gene ID= ENSG00000118156.12 TPM= 3.19 Transcript Type= NA
chr19	47625300	47629156	47625300	47629156	-	transcript5166.chr19.nnic@NA	transcript5166.chr19.nnic	NA	47625300	47629156	Gene ID= novel_gene_chr19_5167 TPM= 6.37 Transcript Type= NA
chr19	47713343	47743134	47713343	47743134	+	ENST00000263277.7@EHD2	ENST00000263277.7	protein_coding	47713343,47716558,47718509,47725812,47736369,47740881	47713538,47717016,47718606,47726224,47736533,47743134	Gene ID= ENSG00000024422.11 TPM= 46.2 Transcript Type= protein_coding
chr19	47741877	47744808	47741877	47744808	+	transcript5172.chr19.nnic@NA	transcript5172.chr19.nnic	NA	47741877	47744808	Gene ID= novel_gene_chr19_5173 TPM= 10.09 Transcript Type= NA
chr19	47745498	47757058	47745498	47757058	+	transcript5180.chr19.nnic@NOP53	transcript5180.chr19.nnic	protein_coding	47745498,47746967,47750178,47750908,47751520,47752512,47754527,47754709,47755348,47755756,47756688,47756999	47745783,47747031,47750286,47751107,47751590,47752607,47754631,47754891,47755523,47755822,47756744,47757058	Gene ID= ENSG00000105373.18 TPM= 58.42 Transcript Type= NA
chr19	47745522	47757058	47745522	47757058	+	ENST00000246802.9@NOP53	ENST00000246802.9	protein_coding	47745522,47746967,47750178,47750908,47751520,47752512,47754527,47754709,47755348,47755756,47756528,47756688,47756999	47745783,47747031,47750286,47751107,47751590,47752607,47754631,47754891,47755523,47755822,47756604,47756744,47757058	Gene ID= ENSG00000105373.18 TPM= 236.86 Transcript Type= protein_coding
chr19	47778572	47784681	47778572	47784681	+	ENST00000601048.5@SELENOW	ENST00000601048.5	protein_coding	47778572,47780725,47780864,47781108,47781290,47784290	47778814,47780749,47780917,47781182,47781388,47784681	Gene ID= ENSG00000178980.14 TPM= 785.65 Transcript Type= protein_coding
chr19	47780388	47784648	47780388	47784648	+	ENST00000598956.5@SELENOW	ENST00000598956.5	protein_coding	47780388,47780864,47781108,47781290,47784290	47780749,47781000,47781182,47781388,47784648	Gene ID= ENSG00000178980.14 TPM= 1.06 Transcript Type= retained_intron
chr19	48047846	48110879	48047846	48110879	-	transcript5205.chr19.nnic@PLA2G4C	transcript5205.chr19.nnic	protein_coding	48110487,48106522,48105333,48104588,48099671,48098139,48095464,48090364,48088686,48085059,48077771,48074767,48067791,48061998,48054878,48052997,48047846	48110879,48106561,48105444,48104724,48099860,48098259,48095604,48090417,48088745,48085112,48077824,48074874,48067886,48062152,48055049,48053147,48048388	Gene ID= ENSG00000105499.13 TPM= 7.97 Transcript Type= NA
chr19	48061571	48110879	48061571	48110879	-	transcript5208.chr19.nic@PLA2G4C	transcript5208.chr19.nic	protein_coding	48110487,48106522,48105333,48104588,48099671,48098139,48095464,48090364,48088686,48085059,48077771,48074767,48067791,48061998,48061571	48110879,48106561,48105444,48104724,48099860,48098259,48095604,48090417,48088712,48085112,48077824,48074874,48067886,48062152,48061837	Gene ID= ENSG00000105499.13 TPM= 3.72 Transcript Type= NA
chr19	48047844	48110782	48047844	48110782	-	ENST00000354276.7@PLA2G4C	ENST00000354276.7	protein_coding	48110487,48106522,48105333,48104588,48099671,48098139,48095464,48090364,48088686,48085059,48077771,48074767,48067791,48061998,48054878,48052954,48047844	48110782,48106561,48105444,48104724,48099860,48098259,48095604,48090417,48088712,48085112,48077824,48074874,48067886,48062152,48055049,48053147,48048388	Gene ID= ENSG00000105499.13 TPM= 5.31 Transcript Type= protein_coding
chr19	48073986	48076685	48073986	48076685	-	transcript5210.chr19.nnic@NA	transcript5210.chr19.nnic	NA	48073986	48076685	Gene ID= novel_gene_chr19_5211 TPM= 2.12 Transcript Type= NA
chr19	48115445	48170603	48115445	48170603	-	ENST00000263274.11@LIG1	ENST00000263274.11	protein_coding	48170241,48165550,48162262,48161372,48157014,48153872,48151232,48150088,48149763,48143883,48143543,48139971,48137522,48137008,48136034,48135680,48133981,48132982,48131076,48127910,48127277,48123174,48122934,48121170,48119137,48117638,48115873,48115445	48170603,48165623,48162351,48161507,48157140,48153967,48151339,48150210,48149841,48143963,48143599,48140143,48137688,48137084,48136125,48135779,48134066,48133097,48131171,48128020,48127348,48123318,48123016,48121322,48119190,48117781,48115965,48115732	Gene ID= ENSG00000105486.13 TPM= 6.37 Transcript Type= protein_coding
chr19	48255675	48258199	48255675	48258199	+	ENST00000602172.1@CARD8-AS1	ENST00000602172.1	antisense_RNA	48255675,48256351	48255794,48258199	Gene ID= ENSG00000268001.1 TPM= 5.31 Transcript Type= antisense_RNA
chr19	48325325	48330553	48325325	48330553	+	ENST00000270221.10@EMP3	ENST00000270221.10	protein_coding	48325325,48326830,48327521,48329352,48330301	48325610,48326922,48327623,48329492,48330553	Gene ID= ENSG00000142227.10 TPM= 55.58 Transcript Type= protein_coding
chr19	48325357	48330553	48325357	48330553	+	transcript5233.chr19.nnic@EMP3	transcript5233.chr19.nnic	protein_coding	48325357,48326830,48329352,48330301	48325610,48326922,48329492,48330553	Gene ID= ENSG00000142227.10 TPM= 2.47 Transcript Type= NA
chr19	48325347	48330553	48325347	48330553	+	ENST00000596315.5@EMP3	ENST00000596315.5	protein_coding	48325347,48327521,48329352,48330301	48325610,48327623,48329492,48330553	Gene ID= ENSG00000142227.10 TPM= 3.54 Transcript Type= protein_coding
chr19	48332356	48364237	48332356	48364237	-	ENST00000293261.7@TMEM143	ENST00000293261.7	protein_coding	48363898,48363291,48360072,48345160,48343321,48342530,48334008,48332356	48364237,48363531,48360176,48345354,48343451,48342809,48334197,48333433	Gene ID= ENSG00000161558.10 TPM= 28.68 Transcript Type= protein_coding
chr19	48382570	48391553	48382570	48391553	-	ENST00000330720.6@KDELR1	ENST00000330720.6	protein_coding	48391268,48390424,48389553,48384230,48382570	48391553,48390524,48389711,48384482,48383327	Gene ID= ENSG00000105438.8 TPM= 53.11 Transcript Type= protein_coding
chr19	48382578	48390855	48382578	48390855	-	ENST00000597017.5@KDELR1	ENST00000597017.5	protein_coding	48390424,48389553,48384230,48382578	48390855,48389711,48384482,48383327	Gene ID= ENSG00000105438.8 TPM= 21.24 Transcript Type= protein_coding
chr19	48445773	48457022	48445773	48457022	+	ENST00000253237.9@GRWD1	ENST00000253237.9	protein_coding	48445773,48446385,48446681,48450313,48450666,48451034,48452708	48446192,48446502,48446843,48450526,48450808,48451231,48457022	Gene ID= ENSG00000105447.12 TPM= 2.12 Transcript Type= protein_coding
chr19	48469032	48482314	48469032	48482314	+	ENST00000452733.6@CYTH2	ENST00000452733.6	protein_coding	48469032,48470353,48470603,48472325,48473298,48473905,48474182,48474838,48478069,48478275,48478438,48479123	48469526,48470500,48470669,48472443,48473378,48474017,48474330,48474949,48478145,48478346,48478592,48482314	Gene ID= ENSG00000105443.14 TPM= 46.74 Transcript Type= protein_coding
chr19	48469321	48479365	48469321	48479365	+	ENST00000391881.7@CYTH2	ENST00000391881.7	protein_coding	48469321,48470353,48470603,48472325,48473298,48473905,48474182,48474838,48478069,48478275,48478438,48479123	48469526,48470500,48470669,48472443,48473378,48474017,48474330,48474953,48478145,48478346,48478592,48479365	Gene ID= ENSG00000105443.14 TPM= 57.36 Transcript Type= nonsense_mediated_decay
chr19	48485271	48498604	48485271	48498604	-	transcript5249.chr19.nic@LMTK3	transcript5249.chr19.nic	protein_coding	48497393,48493694,48491404,48491108,48485271	48498604,48494109,48491539,48491245,48485789	Gene ID= ENSG00000142235.8 TPM= 3.19 Transcript Type= NA
chr19	48513207	48513660	48513207	48513660	-	ENST00000598924.1@AC008403.3	ENST00000598924.1	lincRNA	48513207	48513660	Gene ID= ENSG00000269814.1 TPM= 1.06 Transcript Type= lincRNA
chr19	48615328	48619536	48615328	48619536	-	ENST00000549920.5@RPL18	ENST00000549920.5	protein_coding	48619141,48617791,48617316,48616726,48616079,48615877,48615328	48619536,48617877,48617423,48616824,48616202,48615946,48615447	Gene ID= ENSG00000063177.12 TPM= 90.28 Transcript Type= protein_coding
chr19	48615331	48617884	48615331	48617884	-	ENST00000084795.9@RPL18	ENST00000084795.9	protein_coding	48617791,48617316,48616726,48616079,48615877,48615331	48617884,48617423,48616824,48616202,48615946,48615447	Gene ID= ENSG00000063177.12 TPM= 33.99 Transcript Type= protein_coding
chr19	48619291	48630405	48619291	48630405	+	ENST00000245222.8@SPHK2	ENST00000245222.8	protein_coding	48619291,48620402,48625891,48627692,48627975,48628162,48628681	48619543,48620553,48626362,48627841,48628069,48628277,48630405	Gene ID= ENSG00000063176.15 TPM= 3.72 Transcript Type= protein_coding
chr19	48624952	48630405	48624952	48630405	+	ENST00000599748.5@SPHK2	ENST00000599748.5	protein_coding	48624952,48625891,48627692,48627975,48628162,48628681	48625076,48626362,48627841,48628069,48628277,48630405	Gene ID= ENSG00000063176.15 TPM= 3.72 Transcript Type= protein_coding
chr19	48625029	48626814	48625029	48626814	+	ENST00000598574.1@SPHK2	ENST00000598574.1	protein_coding	48625029	48626814	Gene ID= ENSG00000063176.15 TPM= 1.06 Transcript Type= retained_intron
chr19	48623180	48625775	48623180	48625775	-	transcript5256.chr19.nnic@NA	transcript5256.chr19.nnic	NA	48623180	48625775	Gene ID= novel_gene_chr19_5257 TPM= 4.25 Transcript Type= NA
chr19	48638015	48639138	48638015	48639138	-	ENST00000599267.1@CA11	ENST00000599267.1	protein_coding	48638888,48638015	48639138,48638144	Gene ID= ENSG00000063180.8 TPM= 1.06 Transcript Type= retained_intron
chr19	48638016	48638385	48638016	48638385	-	ENST00000594088.1@CA11	ENST00000594088.1	protein_coding	48638240,48638016	48638385,48638144	Gene ID= ENSG00000063180.8 TPM= 1.06 Transcript Type= retained_intron
chr19	48702452	48714096	48702452	48714096	-	transcript5264.chr19.nnic@MAMSTR	transcript5264.chr19.nnic	protein_coding	48713860,48707291,48704558,48702452	48714096,48707411,48704662,48703767	Gene ID= ENSG00000176909.11 TPM= 2.12 Transcript Type= NA
chr19	48720587	48740721	48720587	48740721	-	ENST00000222145.8@RASIP1	ENST00000222145.8	protein_coding	48740521,48740146,48738960,48735196,48728937,48727393,48727007,48726785,48724717,48724337,48721854,48720587	48740721,48740286,48739645,48735551,48729590,48727430,48727158,48726888,48724960,48724509,48722001,48720997	Gene ID= ENSG00000105538.9 TPM= 42.49 Transcript Type= protein_coding
chr19	48795065	48811027	48795065	48811027	-	ENST00000402551.5@BCAT2	ENST00000402551.5	protein_coding	48810984,48807756,48807000,48806517,48800187,48799981,48799675,48797191,48796937,48796578,48796428,48795065	48811027,48808236,48807074,48806717,48800297,48800100,48799838,48797333,48797022,48796718,48796502,48795464	Gene ID= ENSG00000105552.14 TPM= 14.34 Transcript Type= protein_coding
chr19	48795066	48811020	48795066	48811020	-	ENST00000316273.10@BCAT2	ENST00000316273.10	protein_coding	48810984,48807000,48806517,48800187,48799981,48799675,48797191,48796937,48796578,48796428,48795066	48811020,48807074,48806717,48800297,48800100,48799838,48797333,48797022,48796718,48796502,48795464	Gene ID= ENSG00000105552.14 TPM= 38.24 Transcript Type= protein_coding
chr19	48795062	48811012	48795062	48811012	-	ENST00000545387.6@BCAT2	ENST00000545387.6	protein_coding	48810984,48800187,48799981,48799675,48797191,48796937,48796578,48796428,48795062	48811012,48800297,48800100,48799838,48797333,48797022,48796718,48796502,48795464	Gene ID= ENSG00000105552.14 TPM= 7.97 Transcript Type= protein_coding
chr19	48813018	48836656	48813018	48836656	-	transcript5303.chr19.nic@HSD17B14	transcript5303.chr19.nic	protein_coding	48836324,48835805,48834276,48832666,48831668,48815037,48813663,48813018	48836656,48835843,48834358,48832732,48831759,48815141,48813730,48813348	Gene ID= ENSG00000087076.8 TPM= 5.31 Transcript Type= NA
chr19	48837097	48868690	48837097	48868690	-	transcript5285.chr19.nic@PLEKHA4	transcript5285.chr19.nic	protein_coding	48868083,48867537,48865503,48861620,48861401,48860350,48859469,48858860,48854217,48854007,48853682,48852228,48847900,48845517,48845370,48841149,48839205,48838017,48837097	48868690,48867626,48865610,48861692,48861501,48860459,48859684,48859139,48854264,48854087,48853831,48852326,48848040,48845616,48845446,48841310,48839263,48838129,48837551	Gene ID= ENSG00000105559.11 TPM= 26.2 Transcript Type= NA
chr19	48837097	48868628	48837097	48868628	-	transcript5288.chr19.nic@PLEKHA4	transcript5288.chr19.nic	protein_coding	48868083,48867537,48865503,48861620,48861401,48860350,48859469,48858860,48857422,48854217,48854007,48853682,48852228,48847900,48845517,48845370,48841149,48838017,48837097	48868628,48867626,48865610,48861692,48861501,48860459,48859684,48859139,48857496,48854264,48854087,48853831,48852326,48848040,48845616,48845446,48841310,48838129,48837551	Gene ID= ENSG00000105559.11 TPM= 24.08 Transcript Type= NA
chr19	48837097	48868637	48837097	48868637	-	transcript5294.chr19.nic@PLEKHA4	transcript5294.chr19.nic	protein_coding	48868083,48867537,48865503,48861620,48861401,48860350,48859469,48858860,48854217,48854007,48853682,48852228,48847900,48845517,48845370,48841149,48838017,48837097	48868637,48867626,48865610,48861692,48861501,48860459,48859684,48859139,48854264,48854087,48853831,48852326,48848040,48845616,48845446,48841310,48838129,48837551	Gene ID= ENSG00000105559.11 TPM= 12.4 Transcript Type= NA
chr19	48837097	48868632	48837097	48868632	-	ENST00000263265.10@PLEKHA4	ENST00000263265.10	protein_coding	48868083,48867537,48865503,48861620,48861401,48860350,48859469,48858860,48857422,48854217,48854007,48853682,48852228,48847900,48845517,48845370,48841149,48839205,48838017,48837097	48868632,48867626,48865610,48861692,48861501,48860459,48859684,48859139,48857496,48854264,48854087,48853831,48852326,48848040,48845616,48845446,48841310,48839263,48838129,48837551	Gene ID= ENSG00000105559.11 TPM= 87.28 Transcript Type= protein_coding
chr19	48837110	48845551	48837110	48845551	-	ENST00000597129.1@PLEKHA4	ENST00000597129.1	protein_coding	48845517,48845370,48841149,48838017,48837110	48845551,48845446,48841310,48838129,48837551	Gene ID= ENSG00000105559.11 TPM= 4.25 Transcript Type= protein_coding
chr19	48872392	48876057	48872392	48876057	+	ENST00000200453.5@PPP1R15A	ENST00000200453.5	protein_coding	48872392,48873225,48875614	48872651,48874898,48876057	Gene ID= ENSG00000087074.7 TPM= 560.47 Transcript Type= protein_coding
chr19	48872420	48876057	48872420	48876057	+	transcript5313.chr19.nic@PPP1R15A	transcript5313.chr19.nic	protein_coding	48872420,48873225	48872651,48876057	Gene ID= ENSG00000087074.7 TPM= 23.02 Transcript Type= NA
chr19	48900050	48923372	48900050	48923372	+	ENST00000405315.8@NUCB1	ENST00000405315.8	protein_coding	48900050,48900786,48904347,48905753,48911149,48913011,48913474,48918726,48919030,48919194,48921154,48921827,48922318	48900372,48900931,48904454,48905885,48911252,48913196,48913564,48918784,48919122,48919286,48921324,48921932,48923372	Gene ID= ENSG00000104805.15 TPM= 11.24 Transcript Type= protein_coding
chr19	48900394	48923268	48900394	48923268	+	transcript5326.chr19.nic@NUCB1	transcript5326.chr19.nic	protein_coding	48900394,48900786,48904347,48905753,48911149,48913011,48913474,48918726,48919030,48919194,48921154,48921827,48922318	48900658,48900931,48904454,48905885,48911252,48913196,48913564,48918784,48919122,48919286,48921324,48921932,48923268	Gene ID= ENSG00000104805.15 TPM= 19.73 Transcript Type= NA
chr19	48907274	48907836	48907274	48907836	-	transcript5334.chr19.nnic@NA	transcript5334.chr19.nnic	NA	48907274	48907836	Gene ID= novel_gene_chr19_5335 TPM= 4.25 Transcript Type= NA
chr19	48954877	48961798	48954877	48961798	+	ENST00000345358.11@BAX	ENST00000345358.11	protein_coding	48954877,48955548,48955687,48956198,48960810,48961532	48954962,48955599,48955833,48956333,48960914,48961798	Gene ID= ENSG00000087088.19 TPM= 3.19 Transcript Type= protein_coding
chr19	48965301	48966878	48965301	48966878	+	ENST00000331825.10@FTL	ENST00000331825.10	protein_coding	48965301,48965770,48966281,48966583	48965609,48965916,48966406,48966878	Gene ID= ENSG00000087086.14 TPM= 912.93 Transcript Type= protein_coding
chr19	48968130	48993392	48968130	48993392	-	transcript5336.chr19.nnic@GYS1	transcript5336.chr19.nnic	protein_coding	48992995,48991302,48987194,48985850,48985461,48982720,48982248,48981530,48978098,48977924,48974620,48974213,48970928,48970546,48969775,48968130	48993392,48991483,48987385,48986035,48985605,48982837,48982375,48981630,48978157,48978002,48974733,48974339,48971023,48970709,48969855,48969611	Gene ID= ENSG00000104812.14 TPM= 59.48 Transcript Type= NA
chr19	48968125	48993309	48968125	48993309	-	ENST00000323798.7@GYS1	ENST00000323798.7	protein_coding	48992995,48991302,48987194,48985850,48985461,48982720,48982255,48981530,48978098,48977924,48974620,48974213,48970928,48970546,48969775,48968125	48993309,48991483,48987385,48986035,48985605,48982837,48982375,48981636,48978157,48978002,48974733,48974339,48971023,48970709,48969855,48969611	Gene ID= ENSG00000104812.14 TPM= 83.91 Transcript Type= protein_coding
chr19	48993448	49015995	48993448	49015995	+	ENST00000595090.5@RUVBL2	ENST00000595090.5	protein_coding	48993448,48999319,49003279,49004277,49007018,49007302,49009776,49009973,49010488,49010999,49011192,49014484,49015021,49015572,49015817	48993923,48999373,49003334,49004418,49007147,49007368,49009882,49010066,49010611,49011093,49011310,49014603,49015150,49015686,49015995	Gene ID= ENSG00000183207.13 TPM= 7.44 Transcript Type= protein_coding
chr19	48993899	49015926	48993899	49015926	+	ENST00000221413.10@RUVBL2	ENST00000221413.10	protein_coding	48993899,48999319,49003279,49004277,49007018,49007302,49009776,49009973,49010488,49010999,49011192,49014484,49015021,49015572,49015817	48993923,48999373,49003334,49004418,49007147,49007368,49009871,49010066,49010611,49011093,49011310,49014603,49015150,49015686,49015926	Gene ID= ENSG00000183207.13 TPM= 69.04 Transcript Type= nonsense_mediated_decay
chr19	49085474	49108602	49085474	49108602	+	transcript5357.chr19.nnic@SNRNP70	transcript5357.chr19.nnic	protein_coding	49085474,49086405,49090291,49090466,49098427,49098642,49101390,49102114,49105967,49107625,49107795	49085636,49086561,49090353,49090520,49098491,49098704,49101471,49104735,49106160,49107712,49108602	Gene ID= ENSG00000104852.14 TPM= 26.1 Transcript Type= NA
chr19	49085477	49108605	49085477	49108605	+	transcript5358.chr19.nnic@SNRNP70	transcript5358.chr19.nnic	protein_coding	49085477,49086405,49090291,49090466,49098427,49098642,49101390,49102114,49105967,49107625,49107822	49085636,49086561,49090353,49090520,49098491,49098704,49101471,49104735,49106160,49107712,49108605	Gene ID= ENSG00000104852.14 TPM= 14.47 Transcript Type= NA
chr19	49085455	49108602	49085455	49108602	+	transcript5363.chr19.nic@SNRNP70	transcript5363.chr19.nic	protein_coding	49085455,49086405,49090291,49090466,49098427,49098642,49101390,49102114,49107625,49107795	49085636,49086561,49090353,49090520,49098491,49098704,49101471,49104735,49107712,49108602	Gene ID= ENSG00000104852.14 TPM= 74.97 Transcript Type= NA
chr19	49085306	49108605	49085306	49108605	+	transcript5364.chr19.nic@SNRNP70	transcript5364.chr19.nic	protein_coding	49085306,49086405,49090291,49090466,49098427,49098642,49101390,49102114,49107625,49107822	49085636,49086561,49090353,49090520,49098491,49098704,49101471,49104735,49107712,49108605	Gene ID= ENSG00000104852.14 TPM= 60.14 Transcript Type= NA
chr19	49085451	49108563	49085451	49108563	+	ENST00000221448.9@SNRNP70	ENST00000221448.9	protein_coding	49085451,49086405,49090291,49090466,49098427,49098642,49101390,49104634,49107625,49107822	49085636,49086561,49090353,49090520,49098491,49098704,49101471,49104735,49107712,49108563	Gene ID= ENSG00000104852.14 TPM= 34.48 Transcript Type= protein_coding
chr19	49085419	49108598	49085419	49108598	+	ENST00000601065.5@SNRNP70	ENST00000601065.5	protein_coding	49085419,49086405,49090291,49090466,49098427,49098642,49101390,49102114,49104634,49107625,49107795	49085636,49086561,49090353,49090520,49098491,49098704,49101471,49102173,49104735,49107712,49108598	Gene ID= ENSG00000104852.14 TPM= 46.91 Transcript Type= nonsense_mediated_decay
chr19	49085451	49108603	49085451	49108603	+	ENST00000401730.5@SNRNP70	ENST00000401730.5	protein_coding	49085451,49086405,49090291,49090466,49098427,49098642,49101390,49102114,49104634,49107625,49107795	49085636,49086561,49090353,49090520,49098491,49098704,49101471,49103587,49104735,49107712,49108603	Gene ID= ENSG00000104852.14 TPM= 11.76 Transcript Type= nonsense_mediated_decay
chr19	49095763	49099437	49095763	49099437	+	transcript5370.chr19.nnic@NA	transcript5370.chr19.nnic	NA	49095763	49099437	Gene ID= novel_gene_chr19_5371 TPM= 2.12 Transcript Type= NA
chr19	49103913	49105753	49103913	49105753	+	transcript5372.chr19.nnic@NA	transcript5372.chr19.nnic	NA	49103913	49105753	Gene ID= novel_gene_chr19_5373 TPM= 2.12 Transcript Type= NA
chr19	49105939	49108611	49105939	49108611	+	transcript5374.chr19.nnic@NA	transcript5374.chr19.nnic	NA	49105939	49108611	Gene ID= novel_gene_chr19_5375 TPM= 21.24 Transcript Type= NA
chr19	49114353	49118460	49114353	49118460	+	transcript5381.chr19.nnic@LIN7B	transcript5381.chr19.nnic	protein_coding	49114353,49114849,49115260,49116263,49117855,49118352	49114441,49114967,49115331,49116472,49118087,49118460	Gene ID= ENSG00000104863.11 TPM= 2.12 Transcript Type= NA
chr19	49114324	49118460	49114324	49118460	+	ENST00000391864.7@LIN7B	ENST00000391864.7	protein_coding	49114324,49114849,49115260,49117855,49118352	49114441,49114967,49115331,49118018,49118460	Gene ID= ENSG00000104863.11 TPM= 3.19 Transcript Type= protein_coding
chr19	49114630	49118460	49114630	49118460	+	transcript5393.chr19.nnic@LIN7B	transcript5393.chr19.nnic	protein_coding	49114630,49117855,49118352	49114967,49118018,49118460	Gene ID= ENSG00000104863.11 TPM= 3.19 Transcript Type= NA
chr19	49114361	49118460	49114361	49118460	+	ENST00000221459.6@LIN7B	ENST00000221459.6	protein_coding	49114361,49114849,49115260,49116263,49117855,49118352	49114441,49114967,49115331,49116472,49118018,49118460	Gene ID= ENSG00000104863.11 TPM= 38.24 Transcript Type= protein_coding
chr19	49118397	49119140	49118397	49119140	-	ENST00000408991.3@C19orf73	ENST00000408991.3	protein_coding	49118397	49119140	Gene ID= ENSG00000221916.3 TPM= 4.25 Transcript Type= protein_coding
chr19	49149958	49151021	49149958	49151021	+	ENST00000602783.1@PPFIA3	ENST00000602783.1	protein_coding	49149958,49150236	49150151,49151021	Gene ID= ENSG00000177380.13 TPM= 9.56 Transcript Type= retained_intron
chr19	49151044	49155495	49151044	49155495	-	transcript5397.chr19.nnic@HRC	transcript5397.chr19.nnic	protein_coding	49153407,49153261,49152310,49152004,49151517,49151198,49151044	49155495,49153331,49152378,49152058,49151553,49151332,49151050	Gene ID= ENSG00000130528.11 TPM= 23.37 Transcript Type= NA
chr19	49151198	49155427	49151198	49155427	-	transcript5454.chr19.nnic@HRC	transcript5454.chr19.nnic	protein_coding	49153407,49152310,49152004,49151517,49151198	49155427,49152378,49152058,49151553,49151332	Gene ID= ENSG00000130528.11 TPM= 35.16 Transcript Type= NA
chr19	49151198	49155424	49151198	49155424	-	ENST00000252825.8@HRC	ENST00000252825.8	protein_coding	49153407,49153261,49152310,49152004,49151517,49151198	49155424,49153331,49152378,49152058,49151553,49151332	Gene ID= ENSG00000130528.11 TPM= 926.2 Transcript Type= protein_coding
chr19	49157741	49211836	49157741	49211836	+	ENST00000252826.9@TRPM4	ENST00000252826.9	protein_coding	49157741,49158192,49166041,49167917,49168260,49168553,49171357,49171578,49172009,49181349,49182578,49183078,49188641,49188946,49190208,49190696,49196440,49200300,49200611,49201964,49210209,49210710,49211015,49211164,49211494	49157890,49158259,49166215,49168097,49168423,49168736,49171418,49171769,49172108,49181461,49182922,49183212,49188770,49189091,49190320,49190773,49196874,49200432,49200785,49202141,49210405,49210842,49211087,49211269,49211836	Gene ID= ENSG00000130529.15 TPM= 42.49 Transcript Type= protein_coding
chr19	49157754	49211836	49157754	49211836	+	transcript5478.chr19.nnic@TRPM4	transcript5478.chr19.nnic	protein_coding	49157754,49158192,49168260,49168553,49171357,49171578,49181349,49182578,49183078,49188641,49188946,49190208,49190696,49196440,49200300,49200611,49201964,49210209,49210710,49211015,49211164,49211494	49157890,49158259,49168423,49168736,49171418,49171769,49181461,49182867,49183212,49188770,49189091,49190320,49190773,49196874,49200432,49200785,49202141,49210405,49210842,49211087,49211269,49211836	Gene ID= ENSG00000130529.15 TPM= 38.24 Transcript Type= NA
chr19	49157792	49159921	49157792	49159921	+	ENST00000599628.5@TRPM4	ENST00000599628.5	protein_coding	49157792,49158192	49157890,49159921	Gene ID= ENSG00000130529.15 TPM= 21.24 Transcript Type= protein_coding
chr19	49189543	49191645	49189543	49191645	-	transcript5495.chr19.nnic@NA	transcript5495.chr19.nnic	NA	49189543	49191645	Gene ID= novel_gene_chr19_5496 TPM= 2.12 Transcript Type= NA
chr19	49193082	49194672	49193082	49194672	-	transcript5497.chr19.nnic@NA	transcript5497.chr19.nnic	NA	49193082	49194672	Gene ID= novel_gene_chr19_5498 TPM= 7.44 Transcript Type= NA
chr19	49335400	49340606	49335400	49340606	+	ENST00000323906.8@CD37	ENST00000323906.8	protein_coding	49335400,49335714,49336909,49337147,49337925,49338700,49339330,49340251	49335609,49335786,49337033,49337221,49338029,49338936,49339413,49340606	Gene ID= ENSG00000104894.11 TPM= 2.12 Transcript Type= protein_coding
chr19	49340595	49362396	49340595	49362396	-	transcript5500.chr19.nic@TEAD2	transcript5500.chr19.nic	protein_coding	49362333,49359844,49359435,49357252,49355959,49355303,49355148,49351301,49348703,49347190,49343231,49342438,49340595	49362396,49360081,49359499,49357314,49355970,49355419,49355206,49351365,49348845,49347363,49343398,49342590,49341437	Gene ID= ENSG00000074219.13 TPM= 5.7 Transcript Type= NA
chr19	49340595	49362406	49340595	49362406	-	transcript5501.chr19.nic@TEAD2	transcript5501.chr19.nic	protein_coding	49362373,49359844,49359435,49357252,49355959,49355303,49355148,49351301,49348703,49347190,49343231,49342438,49340595	49362406,49360081,49359499,49357314,49355970,49355419,49355206,49351365,49348845,49347363,49343398,49342590,49341437	Gene ID= ENSG00000074219.13 TPM= 7.83 Transcript Type= NA
chr19	49340595	49362407	49340595	49362407	-	ENST00000601519.5@TEAD2	ENST00000601519.5	protein_coding	49362329,49359844,49359435,49357252,49355303,49355148,49351301,49348703,49347190,49343231,49342438,49340595	49362407,49360081,49359499,49357314,49355419,49355206,49351365,49348845,49347363,49343398,49342590,49341437	Gene ID= ENSG00000074219.13 TPM= 7.08 Transcript Type= protein_coding
chr19	49340595	49362457	49340595	49362457	-	ENST00000311227.6@TEAD2	ENST00000311227.6	protein_coding	49362373,49359844,49359435,49357252,49355312,49355148,49351301,49348703,49347190,49343231,49342438,49340595	49362457,49360081,49359499,49357314,49355419,49355206,49351365,49348845,49347363,49343398,49342590,49341437	Gene ID= ENSG00000074219.13 TPM= 8.15 Transcript Type= protein_coding
chr19	49340595	49362382	49340595	49362382	-	ENST00000593945.5@TEAD2	ENST00000593945.5	protein_coding	49362333,49359844,49359435,49357252,49355959,49355312,49355148,49351301,49348703,49347190,49343231,49342438,49340595	49362382,49360081,49359499,49357314,49355970,49355419,49355206,49351365,49348845,49347363,49343398,49342590,49341437	Gene ID= ENSG00000074219.13 TPM= 6.77 Transcript Type= protein_coding
chr19	49422414	49423441	49422414	49423441	-	ENST00000270631.1@PTH2	ENST00000270631.1	protein_coding	49423212,49422414	49423441,49422642	Gene ID= ENSG00000142538.1 TPM= 1.06 Transcript Type= protein_coding
chr19	49446299	49451810	49446299	49451810	-	ENST00000262265.9@PIH1D1	ENST00000262265.9	protein_coding	49451485,49450782,49449475,49448001,49447827,49447338,49447024,49446551,49446299	49451810,49450848,49449654,49448062,49447908,49447467,49447099,49446694,49446423	Gene ID= ENSG00000104872.10 TPM= 15.93 Transcript Type= protein_coding
chr19	49453169	49471048	49453169	49471048	+	ENST00000293350.8@ALDH16A1	ENST00000293350.8	protein_coding	49453169,49458486,49458960,49459670,49460822,49461619,49461884,49462570,49463854,49464127,49464417,49464632,49465738,49466082,49468381,49468864,49470306	49453421,49458588,49459086,49459848,49460899,49461800,49462036,49462755,49463949,49464263,49464522,49464762,49465905,49466283,49468566,49468986,49471048	Gene ID= ENSG00000161618.9 TPM= 8.5 Transcript Type= protein_coding
chr19	49487603	49492308	49487603	49492308	+	ENST00000624069.3@RPL13A	ENST00000624069.3	protein_coding	49487603,49489850,49490232,49490475,49490779,49491040,49491425,49491729	49487644,49489912,49490297,49490576,49490864,49491099,49491547,49492308	Gene ID= ENSG00000142541.16 TPM= 8.32 Transcript Type= nonsense_mediated_decay
chr19	49487554	49492308	49487554	49492308	+	ENST00000391857.8@RPL13A	ENST00000391857.8	protein_coding	49487554,49489850,49490232,49490475,49490779,49491040,49491425,49491729	49487644,49489922,49490297,49490576,49490864,49491099,49491547,49492308	Gene ID= ENSG00000142541.16 TPM= 114.53 Transcript Type= protein_coding
chr19	49487634	49491843	49487634	49491843	+	ENST00000467825.2@RPL13A	ENST00000467825.2	protein_coding	49487634,49489850,49490232,49490475,49490779,49491040,49491425,49491729	49487644,49489922,49490297,49490600,49490864,49491099,49491547,49491843	Gene ID= ENSG00000142541.16 TPM= 364.67 Transcript Type= protein_coding
chr19	49496374	49499689	49496374	49499689	+	ENST00000270625.6@RPS11	ENST00000270625.6	protein_coding	49496374,49497194,49497520,49497917,49499512	49496471,49497325,49497595,49498046,49499689	Gene ID= ENSG00000142534.6 TPM= 157.2 Transcript Type= protein_coding
chr19	49512279	49526333	49512279	49526333	+	ENST00000221466.9@FCGRT	ENST00000221466.9	protein_coding	49512279,49513387,49513882,49514211,49524507,49525457,49526010	49512750,49513473,49514133,49514486,49524776,49525573,49526333	Gene ID= ENSG00000104870.12 TPM= 28.15 Transcript Type= protein_coding
chr19	49512636	49526333	49512636	49526333	+	transcript5540.chr19.nic@FCGRT	transcript5540.chr19.nic	protein_coding	49512636,49513882,49514211,49524507,49525457,49526010	49512750,49514133,49514486,49524776,49525573,49526333	Gene ID= ENSG00000104870.12 TPM= 5.31 Transcript Type= NA
chr19	49513154	49526333	49513154	49526333	+	ENST00000426395.7@FCGRT	ENST00000426395.7	protein_coding	49513154,49513882,49514211,49524507,49525457,49526010	49513473,49514133,49514486,49524776,49525573,49526333	Gene ID= ENSG00000104870.12 TPM= 30.27 Transcript Type= protein_coding
chr19	49521669	49522686	49521669	49522686	-	transcript5544.chr19.nnic@NA	transcript5544.chr19.nnic	NA	49521669	49522686	Gene ID= novel_gene_chr19_5545 TPM= 3.19 Transcript Type= NA
chr19	49555711	49580535	49555711	49580535	-	ENST00000598820.5@NOSIP	ENST00000598820.5	protein_coding	49580515,49560622,49559934,49557090,49556875,49556549,49556317,49555711	49580535,49560692,49560039,49558978,49556993,49556736,49556425,49555822	Gene ID= ENSG00000142546.13 TPM= 3.19 Transcript Type= retained_intron
chr19	49555711	49580572	49555711	49580572	-	ENST00000596358.5@NOSIP	ENST00000596358.5	protein_coding	49580515,49560622,49559934,49558897,49557090,49556875,49556549,49556317,49555711	49580572,49560692,49560039,49558978,49557249,49556993,49556736,49556425,49555822	Gene ID= ENSG00000142546.13 TPM= 18.06 Transcript Type= protein_coding
chr19	49635292	49640201	49635292	49640201	-	ENST00000246792.3@RRAS	ENST00000246792.3	protein_coding	49639946,49637043,49636824,49636619,49635734,49635292	49640201,49637130,49636926,49636727,49635852,49635660	Gene ID= ENSG00000126458.3 TPM= 357.42 Transcript Type= protein_coding
chr19	49642125	49658642	49642125	49658642	+	ENST00000360565.7@SCAF1	ENST00000360565.7	protein_coding	49642125,49645021,49645354,49646108,49646526,49646715,49650868,49654349,49654652,49657761,49658208	49642242,49645134,49645411,49646202,49646626,49646830,49653705,49654431,49654870,49657889,49658642	Gene ID= ENSG00000126461.14 TPM= 84.97 Transcript Type= protein_coding
chr19	49657550	49658631	49657550	49658631	+	transcript5567.chr19.nnic@NA	transcript5567.chr19.nnic	NA	49657550	49658631	Gene ID= novel_gene_chr19_5568 TPM= 5.31 Transcript Type= NA
chr19	49659572	49665875	49659572	49665875	-	ENST00000377139.7@IRF3	ENST00000377139.7	protein_coding	49665631,49664674,49663343,49663188,49662425,49661948,49660713,49659572	49665875,49664846,49663514,49663258,49662617,49662328,49660828,49659833	Gene ID= ENSG00000126456.15 TPM= 24.43 Transcript Type= protein_coding
chr19	49659572	49664516	49659572	49664516	-	transcript5575.chr19.nic@IRF3	transcript5575.chr19.nic	protein_coding	49664443,49663343,49663188,49662425,49661948,49660713,49659572	49664516,49663514,49663258,49662617,49662328,49660844,49659833	Gene ID= ENSG00000126456.15 TPM= 4.25 Transcript Type= NA
chr19	49665961	49673916	49665961	49673916	+	ENST00000598979.5@BCL2L12	ENST00000598979.5	protein_coding	49665961,49666685,49668851,49669024,49670216,49673698	49666067,49666799,49668937,49669115,49670488,49673916	Gene ID= ENSG00000126453.9 TPM= 2.12 Transcript Type= nonsense_mediated_decay
chr19	49677259	49688447	49677259	49688447	+	transcript5589.chr19.nic@PRMT1	transcript5589.chr19.nic	protein_coding	49677259,49680487,49681910,49682196,49683927,49684754,49684922,49686093,49686605	49677316,49680588,49682065,49682259,49684069,49684841,49685037,49686243,49688447	Gene ID= ENSG00000126457.21 TPM= 5.31 Transcript Type= NA
chr19	49677152	49688447	49677152	49688447	+	ENST00000391851.8@PRMT1	ENST00000391851.8	protein_coding	49677152,49680487,49681910,49682196,49683927,49684754,49684922,49686093,49686605,49688162	49677316,49680588,49682065,49682259,49684069,49684841,49685037,49686243,49686726,49688447	Gene ID= ENSG00000126457.21 TPM= 175.92 Transcript Type= protein_coding
chr19	49677272	49688447	49677272	49688447	+	ENST00000454376.6@PRMT1	ENST00000454376.6	protein_coding	49677272,49679872,49680487,49681910,49682196,49683927,49684754,49684922,49686093,49686605,49688162	49677316,49679925,49680588,49682065,49682259,49684069,49684841,49685037,49686243,49686726,49688447	Gene ID= ENSG00000126457.21 TPM= 35.71 Transcript Type= protein_coding
chr19	49712555	49713731	49712555	49713731	+	ENST00000599937.5@CPT1C	ENST00000599937.5	protein_coding	49712555,49712972,49713420	49712849,49713064,49713731	Gene ID= ENSG00000169169.14 TPM= 1.06 Transcript Type= retained_intron
chr19	49766968	49807112	49766968	49807112	+	ENST00000354293.9@AP2A1	ENST00000354293.9	protein_coding	49766968,49781757,49781947,49782531,49791935,49792991,49795630,49798802,49799327,49799629,49799968,49800961,49801390,49801722,49801981,49802949,49803107,49803287,49805453,49805661,49805872,49806119,49806681	49767200,49781825,49782089,49782724,49792064,49793092,49795738,49798952,49799495,49799766,49800150,49801058,49801621,49801889,49802141,49803005,49803189,49803376,49805576,49805777,49805941,49806253,49807112	Gene ID= ENSG00000196961.12 TPM= 39.3 Transcript Type= protein_coding
chr19	49804876	49807113	49804876	49807113	+	ENST00000601356.1@AP2A1	ENST00000601356.1	protein_coding	49804876	49807113	Gene ID= ENSG00000196961.12 TPM= 2.66 Transcript Type= retained_intron
chr19	49767134	49807110	49767134	49807110	+	ENST00000359032.9@AP2A1	ENST00000359032.9	protein_coding	49767134,49781757,49781947,49782531,49791935,49792991,49795630,49798802,49799327,49799629,49799968,49800961,49801390,49801722,49801981,49802534,49802949,49803107,49803287,49805453,49805661,49805872,49806119,49806681	49767200,49781825,49782089,49782724,49792064,49793092,49795738,49798952,49799495,49799766,49800150,49801058,49801621,49801889,49802141,49802599,49803005,49803189,49803376,49805576,49805777,49805941,49806253,49807110	Gene ID= ENSG00000196961.12 TPM= 52.58 Transcript Type= protein_coding
chr19	49806885	49813301	49806885	49813301	-	transcript5602.chr19.nic@FUZ	transcript5602.chr19.nic	protein_coding	49812996,49812615,49812251,49811631,49811363,49809378,49809163,49808717,49808574,49808414,49808115,49806885	49813301,49812736,49812335,49811699,49811467,49809575,49809258,49808823,49808638,49808488,49808159,49807374	Gene ID= ENSG00000010361.13 TPM= 2.12 Transcript Type= NA
chr19	49806869	49813300	49806869	49813300	-	transcript5606.chr19.nic@FUZ	transcript5606.chr19.nic	protein_coding	49812996,49812251,49811631,49811363,49809378,49809163,49808717,49808574,49808414,49806869	49813300,49812335,49811699,49811467,49809575,49809258,49808823,49808638,49808488,49807374	Gene ID= ENSG00000010361.13 TPM= 4.25 Transcript Type= NA
chr19	49806869	49809533	49806869	49809533	-	transcript5610.chr19.nnic@FUZ	transcript5610.chr19.nnic	protein_coding	49809163,49808574,49808414,49806869	49809533,49808638,49808488,49807374	Gene ID= ENSG00000010361.13 TPM= 3.19 Transcript Type= NA
chr19	49806897	49813270	49806897	49813270	-	ENST00000313777.8@FUZ	ENST00000313777.8	protein_coding	49812996,49812615,49812251,49811631,49811363,49809378,49809163,49808717,49808574,49808414,49806897	49813270,49812736,49812335,49811699,49811467,49809575,49809258,49808823,49808638,49808488,49807374	Gene ID= ENSG00000010361.13 TPM= 15.93 Transcript Type= protein_coding
chr19	49806890	49813249	49806890	49813249	-	ENST00000533418.5@FUZ	ENST00000533418.5	protein_coding	49813133,49812615,49812251,49811631,49811363,49809378,49809163,49808717,49808574,49808414,49806890	49813249,49812736,49812335,49811699,49811467,49809575,49809258,49808823,49808638,49808488,49807374	Gene ID= ENSG00000010361.13 TPM= 2.12 Transcript Type= protein_coding
chr19	49806885	49808639	49806885	49808639	-	ENST00000529634.2@FUZ	ENST00000529634.2	protein_coding	49808574,49808414,49808115,49806885	49808639,49808491,49808159,49807374	Gene ID= ENSG00000010361.13 TPM= 2.12 Transcript Type= protein_coding
chr19	49818289	49836979	49818289	49836979	+	ENST00000312865.10@MED25	ENST00000312865.10	protein_coding	49818289,49818571,49819172,49828449,49828970,49829786,49830088,49830511,49830694,49831333,49831936,49832100,49832308,49834986,49835534,49835727,49836226,49836847	49818475,49818616,49819296,49828547,49829090,49829948,49830218,49830598,49830887,49831461,49832021,49832157,49832415,49835177,49835605,49835945,49836406,49836979	Gene ID= ENSG00000104973.16 TPM= 24.43 Transcript Type= protein_coding
chr19	49851191	49860744	49851191	49860744	+	ENST00000599732.5@PTOV1	ENST00000599732.5	protein_coding	49851191,49854406,49854652,49854831,49854970,49856975,49857693,49857904,49858057,49858549,49859986,49860268,49860614	49851499,49854543,49854734,49854888,49855077,49857130,49857782,49857977,49858114,49858653,49860183,49860336,49860744	Gene ID= ENSG00000104960.15 TPM= 58.5 Transcript Type= protein_coding
chr19	49851159	49860733	49851159	49860733	+	ENST00000391842.5@PTOV1	ENST00000391842.5	protein_coding	49851159,49854406,49854652,49854831,49854970,49856975,49857693,49857904,49858057,49858549,49859986,49860268	49851499,49854543,49854734,49854888,49855077,49857130,49857782,49857977,49858114,49858653,49860183,49860733	Gene ID= ENSG00000104960.15 TPM= 5.93 Transcript Type= protein_coding
chr19	49851225	49860740	49851225	49860740	+	ENST00000601675.5@PTOV1	ENST00000601675.5	protein_coding	49851225,49854406,49854652,49854831,49854970,49856975,49857693,49857904,49858057,49858549,49859986,49860268,49860566	49851499,49854543,49854734,49854888,49855077,49857130,49857782,49857977,49858114,49858653,49860183,49860336,49860740	Gene ID= ENSG00000104960.15 TPM= 6.37 Transcript Type= protein_coding
chr19	49861204	49867886	49861204	49867886	-	ENST00000322344.7@PNKP	ENST00000322344.7	protein_coding	49867469,49867054,49866399,49865127,49864324,49864179,49863964,49863689,49862690,49862538,49862371,49862185,49862044,49861772,49861608,49861449,49861204	49867886,49867217,49866445,49865426,49864403,49864236,49864071,49863760,49862738,49862608,49862463,49862281,49862105,49861881,49861695,49861510,49861365	Gene ID= ENSG00000039650.11 TPM= 29.56 Transcript Type= protein_coding
chr19	49861204	49867234	49861204	49867234	-	ENST00000593946.5@PNKP	ENST00000593946.5	protein_coding	49867054,49866399,49865127,49864324,49864179,49863964,49863689,49862690,49862538,49862371,49862185,49862044,49861772,49861608,49861449,49861204	49867234,49866528,49865426,49864403,49864236,49864071,49863760,49862738,49862608,49862463,49862281,49862105,49861881,49861695,49861510,49861365	Gene ID= ENSG00000039650.11 TPM= 4.6 Transcript Type= nonsense_mediated_decay
chr19	49861204	49867565	49861204	49867565	-	transcript5639.chr19.nnic@PNKP	transcript5639.chr19.nnic	protein_coding	49867469,49867054,49866399,49865127,49864324,49864179,49863964,49863689,49862690,49862538,49862371,49862185,49861608,49861449,49861204	49867565,49867217,49866445,49865426,49864403,49864236,49864071,49863760,49862738,49862608,49862463,49862281,49861695,49861510,49861365	Gene ID= ENSG00000039650.11 TPM= 3.01 Transcript Type= NA
chr19	49861231	49867286	49861231	49867286	-	ENST00000596014.5@PNKP	ENST00000596014.5	protein_coding	49867054,49866399,49865127,49864324,49864179,49863964,49863689,49862690,49862538,49862371,49862185,49862044,49861772,49861608,49861449,49861231	49867286,49866445,49865426,49864403,49864236,49864071,49863760,49862738,49862608,49862463,49862281,49862105,49861881,49861695,49861510,49861365	Gene ID= ENSG00000039650.11 TPM= 7.44 Transcript Type= protein_coding
chr19	49869046	49878028	49869046	49878028	-	ENST00000391835.1@AKT1S1	ENST00000391835.1	protein_coding	49876603,49872917,49871812,49871547,49869046	49878028,49873302,49871889,49871716,49870060	Gene ID= ENSG00000204673.10 TPM= 9.21 Transcript Type= protein_coding
chr19	49869039	49877279	49869039	49877279	-	ENST00000391832.7@AKT1S1	ENST00000391832.7	protein_coding	49877025,49872917,49871812,49871547,49869039	49877279,49873302,49871889,49871716,49870060	Gene ID= ENSG00000204673.10 TPM= 17.71 Transcript Type= protein_coding
chr19	49869038	49875285	49869038	49875285	-	ENST00000391833.5@AKT1S1	ENST00000391833.5	protein_coding	49872917,49871812,49871547,49869038	49875285,49871889,49871716,49870060	Gene ID= ENSG00000204673.10 TPM= 6.02 Transcript Type= protein_coding
chr19	49877425	49888744	49877425	49888744	+	ENST00000221543.9@TBC1D17	ENST00000221543.9	protein_coding	49877425,49878143,49878498,49880279,49881268,49882041,49882242,49882764,49882973,49883651,49884253,49884459,49884659,49887476,49887718,49888231,49888424	49877744,49878241,49878572,49880402,49881475,49882152,49882400,49882892,49883076,49883745,49884369,49884559,49884758,49887573,49887834,49888317,49888744	Gene ID= ENSG00000104946.12 TPM= 37.18 Transcript Type= protein_coding
chr19	49879604	49888744	49879604	49888744	+	transcript5656.chr19.nic@TBC1D17	transcript5656.chr19.nic	protein_coding	49879604,49881268,49882041,49882242,49882764,49882973,49883651,49884253,49884459,49884659,49887476,49887718,49888231,49888424	49880402,49881475,49882152,49882400,49882892,49883076,49883745,49884369,49884559,49884758,49887573,49887834,49888317,49888744	Gene ID= ENSG00000104946.12 TPM= 28.68 Transcript Type= NA
chr19	49889654	49896955	49889654	49896955	-	ENST00000391826.6@IL4I1	ENST00000391826.6	protein_coding	49896835,49896148,49895815,49895068,49894268,49891405,49890971,49889654	49896955,49896182,49896053,49895180,49894469,49891473,49891107,49890600	Gene ID= ENSG00000104951.15 TPM= 4.25 Transcript Type= protein_coding
chr19	49907538	49929538	49907538	49929538	-	transcript5667.chr19.nnic@IL4I1	transcript5667.chr19.nnic	protein_coding	49929417,49907538	49929538,49909884	Gene ID= ENSG00000104951.15 TPM= 5.31 Transcript Type= NA
chr19	49907543	49929731	49907543	49929731	-	ENST00000352066.7@NUP62	ENST00000352066.7	protein_coding	49929326,49927694,49907543	49929731,49927815,49909884	Gene ID= ENSG00000213024.11 TPM= 2.12 Transcript Type= protein_coding
chr19	49907543	49929517	49907543	49929517	-	transcript5661.chr19.nic@NUP62	transcript5661.chr19.nic	protein_coding	49929417,49927694,49907543	49929517,49927815,49909884	Gene ID= ENSG00000213024.11 TPM= 4.25 Transcript Type= NA
chr19	49976467	50025386	49976467	50025386	-	ENST00000316763.7@VRK3	ENST00000316763.7	protein_coding	50025267,50020585,50016024,50009236,50007569,50000790,49997504,49995191,49994814,49992860,49989639,49988372,49980955,49979083,49976467	50025386,50020647,50016163,50009385,50007826,50000854,49997570,49995275,49994919,49992952,49989771,49988492,49981013,49979242,49976784	Gene ID= ENSG00000105053.10 TPM= 6.37 Transcript Type= protein_coding
chr19	49981700	50025416	49981700	50025416	-	transcript5674.chr19.nic@VRK3	transcript5674.chr19.nic	protein_coding	50025346,50020585,50016024,50009236,50007569,50000790,49997504,49995191,49994814,49992860,49989639,49988372,49981700	50025416,50020647,50016163,50009385,50007826,50000854,49997570,49995275,49994919,49992952,49989771,49988492,49982188	Gene ID= ENSG00000105053.10 TPM= 2.12 Transcript Type= NA
chr19	49981700	50025327	49981700	50025327	-	ENST00000594092.5@VRK3	ENST00000594092.5	protein_coding	50025267,50020585,50016024,50009236,50007569,50000790,49997504,49995191,49994814,49992860,49989639,49988372,49981700	50025327,50020647,50016163,50009385,50007826,50000854,49997570,49995275,49994919,49992952,49989771,49988492,49982188	Gene ID= ENSG00000105053.10 TPM= 2.12 Transcript Type= protein_coding
chr19	49995752	49997228	49995752	49997228	-	transcript5677.chr19.nnic@NA	transcript5677.chr19.nnic	NA	49995752	49997228	Gene ID= novel_gene_chr19_5678 TPM= 2.12 Transcript Type= NA
chr19	50025806	50048772	50025806	50048772	+	ENST00000391821.6@ZNF473	ENST00000391821.6	protein_coding	50025806,50031014,50039161,50041730,50044670	50026122,50031091,50039287,50041819,50048772	Gene ID= ENSG00000142528.15 TPM= 1.06 Transcript Type= protein_coding
chr19	50136933	50148214	50136933	50148214	-	transcript5681.chr19.nnic@NA	transcript5681.chr19.nnic	NA	50148133,50144027,50136933	50148214,50144115,50137588	Gene ID= novel_gene_chr19_5682 TPM= 2.12 Transcript Type= NA
chr19	50203628	50310542	50203628	50310542	+	ENST00000376970.6@MYH14	ENST00000376970.6	protein_coding	50203628,50210363,50217615,50223083,50223247,50225585,50226903,50230525,50231930,50244242,50247004,50248987,50249650,50250515,50252639,50257299,50259144,50260646,50261475,50263312,50266877,50268161,50271409,50271849,50272560,50275991,50276757,50278083,50280037,50280231,50281594,50286482,50289436,50290887,50292261,50293233,50293564,50301661,50307049,50309005,50309640	50203671,50210770,50217771,50223110,50223349,50225677,50226966,50230623,50232070,50244337,50247122,50249139,50249823,50250688,50252753,50257486,50259265,50260715,50261635,50263420,50267008,50268367,50271546,50271972,50272731,50276203,50276901,50278289,50280141,50280383,50281842,50286694,50289648,50291048,50292389,50293321,50293687,50301869,50307157,50309177,50310542	Gene ID= ENSG00000105357.15 TPM= 97.19 Transcript Type= protein_coding
chr19	50203637	50271482	50203637	50271482	+	ENST00000599920.5@MYH14	ENST00000599920.5	protein_coding	50203637,50210363,50217615,50223083,50223247,50224154,50225585,50226903,50230525,50231930,50244242,50247004,50248987,50249650,50250515,50252639,50257299,50259144,50260646,50261475,50263312,50266877,50268161,50271409	50203671,50210770,50217771,50223110,50223349,50224177,50225677,50226966,50230623,50232070,50244337,50247122,50249139,50249823,50250688,50252753,50257486,50259265,50260715,50261635,50263420,50267008,50268367,50271482	Gene ID= ENSG00000105357.15 TPM= 5.84 Transcript Type= protein_coding
chr19	50376469	50382982	50376469	50382982	+	ENST00000253727.9@NR1H2	ENST00000253727.9	protein_coding	50376469,50376719,50377587,50377733,50378149,50378522,50379002,50379780,50381966,50382456	50376576,50376826,50377648,50377870,50378439,50378796,50379181,50379879,50382174,50382982	Gene ID= ENSG00000131408.13 TPM= 305.02 Transcript Type= protein_coding
chr19	50376473	50382950	50376473	50382950	+	ENST00000599105.5@NR1H2	ENST00000599105.5	protein_coding	50376473,50376719,50377587,50377733,50378149,50378522,50379134,50379780,50381966,50382456	50376576,50376826,50377648,50377870,50378439,50378796,50379181,50379879,50382174,50382950	Gene ID= ENSG00000131408.13 TPM= 9.56 Transcript Type= protein_coding
chr19	50376458	50382978	50376458	50382978	+	ENST00000598168.5@NR1H2	ENST00000598168.5	protein_coding	50376458,50376719,50377587,50377733,50378149,50378522,50379092,50379780,50381966,50382456	50376576,50376826,50377648,50377870,50378439,50378796,50379181,50379879,50382174,50382978	Gene ID= ENSG00000131408.13 TPM= 6.02 Transcript Type= protein_coding
chr19	50384323	50418018	50384323	50418018	+	ENST00000613923.4@POLD1	ENST00000613923.4	protein_coding	50384323,50398851,50399371,50401778,50401999,50402205,50402454,50402612,50403053,50403493,50406182,50406407,50406983,50407327,50408707,50409122,50409519,50413426,50413742,50414815,50415438,50415724,50416396,50416610,50417045,50417172,50417842	50384390,50399053,50399484,50401924,50402124,50402373,50402535,50402741,50403219,50403597,50406322,50406517,50407174,50407415,50408901,50409235,50409666,50413521,50413879,50414990,50415590,50415826,50416528,50416723,50417097,50417269,50418018	Gene ID= ENSG00000062822.12 TPM= 1.06 Transcript Type= protein_coding
chr19	50476499	50490870	50476499	50490870	+	ENST00000334976.10@EMC10	ENST00000334976.10	protein_coding	50476499,50477929,50478957,50480111,50480581,50480884,50482149	50476658,50478001,50479066,50480215,50480762,50480977,50490870	Gene ID= ENSG00000161671.16 TPM= 55.23 Transcript Type= protein_coding
chr19	50493126	50494232	50493126	50494232	+	transcript5731.chr19.nnic@NA	transcript5731.chr19.nnic	NA	50493126	50494232	Gene ID= novel_gene_chr19_5732 TPM= 26.55 Transcript Type= NA
chr19	50497277	50500267	50497277	50500267	-	transcript5735.chr19.nnic@NA	transcript5735.chr19.nnic	NA	50497277	50500267	Gene ID= novel_gene_chr19_5736 TPM= 56.29 Transcript Type= NA
chr19	50506002	50511215	50506002	50511215	-	transcript5718.chr19.nnic@JOSD2	transcript5718.chr19.nnic	protein_coding	50511075,50510286,50507574,50506378,50506002	50511215,50510448,50507699,50506572,50506272	Gene ID= ENSG00000161677.11 TPM= 6.02 Transcript Type= NA
chr19	50505998	50511353	50505998	50511353	-	ENST00000598418.5@JOSD2	ENST00000598418.5	protein_coding	50511117,50510286,50507574,50506378,50505998	50511353,50510448,50507699,50506572,50506272	Gene ID= ENSG00000161677.11 TPM= 26.73 Transcript Type= protein_coding
chr19	50506002	50509220	50506002	50509220	-	transcript5724.chr19.nic@JOSD2	transcript5724.chr19.nic	protein_coding	50507574,50506378,50506002	50509220,50506572,50506272	Gene ID= ENSG00000161677.11 TPM= 5.49 Transcript Type= NA
chr19	50506002	50511220	50506002	50511220	-	transcript5725.chr19.nnic@JOSD2	transcript5725.chr19.nnic	protein_coding	50511117,50506378,50506002	50511220,50506572,50506272	Gene ID= ENSG00000161677.11 TPM= 2.66 Transcript Type= NA
chr19	50506002	50511220	50506002	50511220	-	ENST00000595669.5@JOSD2	ENST00000595669.5	protein_coding	50511117,50510286,50506378,50506002	50511220,50510448,50506572,50506272	Gene ID= ENSG00000161677.11 TPM= 2.66 Transcript Type= protein_coding
chr19	50505998	50511162	50505998	50511162	-	ENST00000601423.5@JOSD2	ENST00000601423.5	protein_coding	50511117,50510286,50507574,50506378,50505998	50511162,50510445,50507699,50506572,50506272	Gene ID= ENSG00000161677.11 TPM= 3.19 Transcript Type= protein_coding
chr19	50723329	50725717	50723329	50725717	+	ENST00000250340.8@CLEC11A	ENST00000250340.8	protein_coding	50723329,50723905,50724410,50725022	50723672,50724091,50724601,50725717	Gene ID= ENSG00000105472.12 TPM= 6.9 Transcript Type= protein_coding
chr19	50723335	50725717	50723335	50725717	+	transcript5741.chr19.nic@CLEC11A	transcript5741.chr19.nic	protein_coding	50723335,50724410,50725022	50724091,50724601,50725717	Gene ID= ENSG00000105472.12 TPM= 4.78 Transcript Type= NA
chr19	50797704	50804929	50797704	50804929	-	ENST00000641834.1@C19orf48	ENST00000641834.1	protein_coding	50804572,50802217,50799294,50797704	50804929,50802257,50799357,50798958	Gene ID= ENSG00000167747.14 TPM= 23.37 Transcript Type= processed_transcript
chr19	51124908	51130310	51124908	51130310	+	ENST00000250360.7@SIGLEC9	ENST00000250360.7	protein_coding	51124908,51125597,51126081,51127030,51127949,51128414,51129891	51125395,51125875,51126128,51127296,51128039,51128510,51130310	Gene ID= ENSG00000129450.8 TPM= 1.06 Transcript Type= protein_coding
chr19	51225098	51240016	51225098	51240016	+	ENST00000262262.4@CD33	ENST00000262262.4	protein_coding	51225098,51225218,51225803,51226309,51235157,51235595,51239518	51225155,51225598,51226081,51226356,51235253,51235676,51240016	Gene ID= ENSG00000105383.14 TPM= 1.06 Transcript Type= protein_coding
chr19	51345171	51366418	51345171	51366418	-	ENST00000309244.8@ETFB	ENST00000309244.8	protein_coding	51366270,51354150,51353132,51350329,51346900,51345171	51366418,51354308,51353290,51350391,51347058,51345381	Gene ID= ENSG00000105379.9 TPM= 432.3 Transcript Type= protein_coding
chr19	51450997	51458454	51450997	51458454	-	ENST00000321424.7@SIGLEC8	ENST00000321424.7	protein_coding	51457934,51457461,51457184,51455418,51454684,51454219,51450997	51458454,51457739,51457231,51455687,51454780,51454315,51452633	Gene ID= ENSG00000105366.15 TPM= 1.06 Transcript Type= protein_coding
chr19	51594561	51601788	51594561	51601788	+	ENST00000598755.1@AC018755.3	ENST00000598755.1	transcribed_processed_pseudogene	51594561,51601211	51594646,51601788	Gene ID= ENSG00000269388.1 TPM= 2.12 Transcript Type= processed_transcript
chr19	51689305	51705190	51689305	51705190	+	transcript5762.chr19.nnic@SPACA6	transcript5762.chr19.nnic	protein_coding	51689305,51694478,51701658,51702629,51703021,51703228,51704030,51704270,51705090	51689582,51694555,51701726,51702652,51703098,51703335,51704186,51704480,51705190	Gene ID= ENSG00000182310.13 TPM= 7.44 Transcript Type= NA
chr19	51713112	51723994	51713112	51723994	-	ENST00000540069.6@HAS1	ENST00000540069.6	protein_coding	51723925,51719206,51716968,51716256,51713112	51723994,51719895,51717193,51716388,51714102	Gene ID= ENSG00000105509.10 TPM= 2.12 Transcript Type= protein_coding
chr19	51745172	51751909	51745172	51751909	-	ENST00000304748.4@FPR1	ENST00000304748.4	protein_coding	51751814,51745172	51751909,51747005	Gene ID= ENSG00000171051.8 TPM= 1.06 Transcript Type= protein_coding
chr19	51871999	51887929	51871999	51887929	-	transcript5774.chr19.nic@ZNF577	transcript5774.chr19.nic	protein_coding	51887844,51886821,51880679,51880323,51878389,51877282,51871999	51887929,51886912,51880877,51880401,51878515,51877377,51873706	Gene ID= ENSG00000161551.14 TPM= 2.12 Transcript Type= NA
chr19	51855810	51887951	51855810	51887951	-	ENST00000640955.1@ZNF577	ENST00000640955.1	protein_coding	51886821,51880679,51880323,51878389,51877282,51860904,51855810	51887951,51880877,51880401,51878515,51877377,51860978,51855967	Gene ID= ENSG00000161551.14 TPM= 2.66 Transcript Type= processed_transcript
chr19	51871999	51887936	51871999	51887936	-	ENST00000639636.1@ZNF577	ENST00000639636.1	protein_coding	51886821,51880679,51880323,51878389,51877282,51871999	51887936,51880877,51880401,51878515,51877377,51873529	Gene ID= ENSG00000161551.14 TPM= 1.06 Transcript Type= protein_coding
chr19	51872550	51887920	51872550	51887920	-	ENST00000638348.1@ZNF577	ENST00000638348.1	protein_coding	51886821,51880679,51880323,51878389,51877282,51872550	51887920,51880877,51880401,51878515,51877377,51873706	Gene ID= ENSG00000161551.14 TPM= 3.72 Transcript Type= protein_coding
chr19	51889224	51905011	51889224	51905011	-	ENST00000354957.7@ZNF649	ENST00000354957.7	protein_coding	51904914,51900093,51896852,51896472,51889224	51905011,51900294,51896978,51896567,51891897	Gene ID= ENSG00000198093.10 TPM= 3.19 Transcript Type= protein_coding
chr19	51927220	51946623	51927220	51946623	+	ENST00000293471.10@ZNF613	ENST00000293471.10	protein_coding	51927220,51929732,51936028,51940209,51940617,51944119	51927540,51929896,51936235,51940335,51940709,51946623	Gene ID= ENSG00000176024.17 TPM= 3.19 Transcript Type= protein_coding
chr19	51964343	51986826	51964343	51986826	-	ENST00000243644.8@ZNF350	ENST00000243644.8	protein_coding	51986770,51974346,51969005,51968578,51964343	51986826,51974531,51969131,51968673,51966214	Gene ID= ENSG00000256683.6 TPM= 6.37 Transcript Type= protein_coding
chr19	51991334	52008196	51991334	52008196	-	ENST00000594083.5@ZNF615	ENST00000594083.5	protein_coding	52008141,52003697,52002155,52001813,52000346,51991334	52008196,52003900,52002281,52001908,52000378,51994837	Gene ID= ENSG00000197619.13 TPM= 1.06 Transcript Type= protein_coding
chr19	52013325	52028570	52013325	52028570	-	ENST00000270649.10@ZNF614	ENST00000270649.10	protein_coding	52028242,52025731,52018368,52018008,52013325	52028570,52025961,52018494,52018103,52017359	Gene ID= ENSG00000142556.18 TPM= 3.19 Transcript Type= protein_coding
chr19	52033420	52048820	52033420	52048820	-	ENST00000221315.9@ZNF432	ENST00000221315.9	protein_coding	52048695,52046854,52041480,52040488,52033420	52048820,52047060,52041606,52040583,52035440	Gene ID= ENSG00000256087.6 TPM= 1.06 Transcript Type= protein_coding
chr19	52094427	52095745	52094427	52095745	-	transcript5810.chr19.nnic@NA	transcript5810.chr19.nnic	NA	52094427	52095745	Gene ID= novel_gene_chr19_5811 TPM= 2.12 Transcript Type= NA
chr19	52160321	52171643	52160321	52171643	-	ENST00000597065.1@ZNF836	ENST00000597065.1	protein_coding	52171336,52169648,52168058,52160321	52171643,52169781,52168152,52160591	Gene ID= ENSG00000196267.12 TPM= 2.12 Transcript Type= protein_coding
chr19	52215797	52226417	52215797	52226417	+	transcript5823.chr19.nnic@PPP2R1A	transcript5823.chr19.nnic	protein_coding	52215797,52216004,52216529,52219691,52220189,52220979,52222099,52225717,52225965	52215812,52216074,52216663,52219864,52220249,52221133,52222241,52225808,52226417	Gene ID= ENSG00000105568.17 TPM= 60.54 Transcript Type= NA
chr19	52213459	52215663	52213459	52215663	-	transcript5825.chr19.nnic@NA	transcript5825.chr19.nnic	NA	52213459	52215663	Gene ID= novel_gene_chr19_5826 TPM= 20.18 Transcript Type= NA
chr19	52336308	52367113	52336308	52367113	+	ENST00000403906.7@ZNF610	ENST00000403906.7	protein_coding	52336308,52347707,52349154,52353682,52354251,52365698	52336506,52347944,52349235,52353808,52354379,52367113	Gene ID= ENSG00000167554.14 TPM= 3.19 Transcript Type= protein_coding
chr19	52369929	52374724	52369929	52374724	+	transcript5847.chr19.nnic@ZNF880	transcript5847.chr19.nnic	protein_coding	52369929,52373111,52374299,52374504	52369977,52373237,52374427,52374724	Gene ID= ENSG00000221923.8 TPM= 2.12 Transcript Type= NA
chr19	52369939	52374717	52369939	52374717	+	ENST00000344085.9@ZNF880	ENST00000344085.9	protein_coding	52369939,52373111,52374299,52374484	52369977,52373237,52374394,52374717	Gene ID= ENSG00000221923.8 TPM= 3.19 Transcript Type= protein_coding
chr19	52397507	52397757	52397507	52397757	-	transcript5856.chr19.nnic@NA	transcript5856.chr19.nnic	NA	52397507	52397757	Gene ID= novel_gene_chr19_5857 TPM= 5.31 Transcript Type= NA
chr19	52397868	52418404	52397868	52418404	+	ENST00000360465.7@ZNF528	ENST00000360465.7	protein_coding	52397868,52398367,52401685,52401947,52405907,52406515,52415124	52397904,52398619,52401753,52402028,52406033,52406643,52418404	Gene ID= ENSG00000167555.13 TPM= 2.12 Transcript Type= protein_coding
chr19	52514964	52516752	52514964	52516752	-	transcript5859.chr19.nnic@NA	transcript5859.chr19.nnic	NA	52514964	52516752	Gene ID= novel_gene_chr19_5860 TPM= 3.19 Transcript Type= NA
chr19	52557272	52557840	52557272	52557840	-	transcript5878.chr19.nnic@NA	transcript5878.chr19.nnic	NA	52557272	52557840	Gene ID= novel_gene_chr19_5879 TPM= 3.19 Transcript Type= NA
chr19	52558089	52560944	52558089	52560944	-	transcript5880.chr19.nnic@NA	transcript5880.chr19.nnic	NA	52558089	52560944	Gene ID= novel_gene_chr19_5881 TPM= 7.97 Transcript Type= NA
chr19	52558138	52559533	52558138	52559533	+	transcript5866.chr19.nnic@NA	transcript5866.chr19.nnic	NA	52558138	52559533	Gene ID= novel_gene_chr19_5867 TPM= 4.25 Transcript Type= NA
chr19	52560063	52562379	52560063	52562379	+	transcript5870.chr19.nnic@NA	transcript5870.chr19.nnic	NA	52560063	52562379	Gene ID= novel_gene_chr19_5871 TPM= 2.66 Transcript Type= NA
chr19	52561404	52564463	52561404	52564463	+	transcript5872.chr19.nnic@NA	transcript5872.chr19.nnic	NA	52561404	52564463	Gene ID= novel_gene_chr19_5873 TPM= 7.44 Transcript Type= NA
chr19	52567145	52568752	52567145	52568752	+	transcript5874.chr19.nnic@NA	transcript5874.chr19.nnic	NA	52567145	52568752	Gene ID= novel_gene_chr19_5875 TPM= 3.19 Transcript Type= NA
chr19	52570275	52584566	52570275	52584566	+	ENST00000391785.7@ZNF701	ENST00000391785.7	protein_coding	52570275,52574077,52575895,52582202	52570330,52574162,52576021,52584566	Gene ID= ENSG00000167562.12 TPM= 1.06 Transcript Type= protein_coding
chr19	52612378	52618040	52612378	52618040	-	ENST00000541777.6@ZNF83	ENST00000541777.6	protein_coding	52616718,52612378	52618040,52614797	Gene ID= ENSG00000167766.18 TPM= 7.44 Transcript Type= protein_coding
chr19	52612367	52638391	52612367	52638391	-	ENST00000536937.5@ZNF83	ENST00000536937.5	protein_coding	52638312,52635066,52618936,52612367	52638391,52635153,52619062,52614797	Gene ID= ENSG00000167766.18 TPM= 1.06 Transcript Type= protein_coding
chr19	52650437	52653284	52650437	52653284	-	ENST00000598322.1@AC022150.4	ENST00000598322.1	sense_intronic	52650437	52653284	Gene ID= ENSG00000269825.1 TPM= 1.06 Transcript Type= sense_intronic
chr19	52720015	52721839	52720015	52721839	-	transcript5897.chr19.nnic@NA	transcript5897.chr19.nnic	NA	52720015	52721839	Gene ID= novel_gene_chr19_5898 TPM= 3.19 Transcript Type= NA
chr19	52797409	52821633	52797409	52821633	-	transcript5902.chr19.nic@ZNF28	transcript5902.chr19.nic	protein_coding	52821586,52817944,52808007,52805145,52797409	52821633,52818031,52808133,52805262,52801702	Gene ID= ENSG00000198538.10 TPM= 4.78 Transcript Type= NA
chr19	52797409	52821632	52797409	52821632	-	ENST00000457749.6@ZNF28	ENST00000457749.6	protein_coding	52821586,52817944,52808007,52797409	52821632,52818031,52808133,52801702	Gene ID= ENSG00000198538.10 TPM= 2.66 Transcript Type= protein_coding
chr19	52838536	52857649	52838536	52857649	-	ENST00000243639.8@ZNF468	ENST00000243639.8	protein_coding	52857572,52854258,52849087,52845179,52838536	52857649,52854345,52849213,52845296,52842151	Gene ID= ENSG00000204604.9 TPM= 2.12 Transcript Type= protein_coding
chr19	52838008	52857619	52838008	52857619	-	ENST00000595646.5@ZNF468	ENST00000595646.5	protein_coding	52857572,52854258,52849087,52838008	52857619,52854345,52849213,52842151	Gene ID= ENSG00000204604.9 TPM= 2.12 Transcript Type= protein_coding
chr19	52952519	52962871	52952519	52962871	-	ENST00000270457.8@ZNF816	ENST00000270457.8	protein_coding	52962727,52956027,52952519	52962871,52956104,52952877	Gene ID= ENSG00000180257.13 TPM= 1.06 Transcript Type= protein_coding
chr19	53066614	53103434	53066614	53103434	-	ENST00000429604.5@ZNF160	ENST00000429604.5	protein_coding	53103265,53091637,53091413,53086262,53075057,53074140,53066614	53103434,53091720,53091529,53086321,53075183,53074268,53070262	Gene ID= ENSG00000170949.17 TPM= 1.41 Transcript Type= protein_coding
chr19	53066615	53103422	53066615	53103422	-	transcript5917.chr19.nic@ZNF160	transcript5917.chr19.nic	protein_coding	53103265,53091637,53091413,53086262,53075057,53074140,53066615	53103422,53091720,53091553,53086321,53075183,53074268,53070262	Gene ID= ENSG00000170949.17 TPM= 2.47 Transcript Type= NA
chr19	53066614	53103434	53066614	53103434	-	ENST00000418871.5@ZNF160	ENST00000418871.5	protein_coding	53103265,53091637,53086262,53075057,53074140,53066614	53103434,53091720,53086321,53075183,53074268,53070262	Gene ID= ENSG00000170949.17 TPM= 3.54 Transcript Type= protein_coding
chr19	53107880	53132918	53107880	53132918	-	transcript5927.chr19.nic@ZNF415	transcript5927.chr19.nic	protein_coding	53132856,53122662,53116313,53115210,53107880	53132918,53122743,53116433,53115307,53109908	Gene ID= ENSG00000170954.11 TPM= 2.43 Transcript Type= NA
chr19	53107883	53132888	53107883	53132888	-	ENST00000500065.8@ZNF415	ENST00000500065.8	protein_coding	53132749,53122404,53116313,53107883	53132888,53122612,53116433,53109908	Gene ID= ENSG00000170954.11 TPM= 1.37 Transcript Type= protein_coding
chr19	53107880	53132918	53107880	53132918	-	ENST00000421033.5@ZNF415	ENST00000421033.5	protein_coding	53132749,53122662,53116313,53107880	53132918,53122743,53116433,53109908	Gene ID= ENSG00000170954.11 TPM= 1.37 Transcript Type= protein_coding
chr19	53107879	53132892	53107879	53132892	-	ENST00000243643.8@ZNF415	ENST00000243643.8	protein_coding	53132856,53122662,53116313,53107879	53132892,53122743,53116433,53109908	Gene ID= ENSG00000170954.11 TPM= 2.43 Transcript Type= protein_coding
chr19	53107879	53132875	53107879	53132875	-	ENST00000601493.5@ZNF415	ENST00000601493.5	protein_coding	53132856,53122662,53107879	53132875,53122743,53109908	Gene ID= ENSG00000170954.11 TPM= 4.56 Transcript Type= protein_coding
chr19	53107879	53132895	53107879	53132895	-	ENST00000595193.5@ZNF415	ENST00000595193.5	protein_coding	53132856,53122662,53116313,53115704,53115210,53107879	53132895,53122743,53116433,53115811,53115307,53109908	Gene ID= ENSG00000170954.11 TPM= 1.37 Transcript Type= protein_coding
chr19	53107879	53132886	53107879	53132886	-	ENST00000597503.5@ZNF415	ENST00000597503.5	protein_coding	53132749,53122662,53116313,53115210,53107879	53132886,53122743,53116433,53115307,53109908	Gene ID= ENSG00000170954.11 TPM= 2.43 Transcript Type= protein_coding
chr19	53241924	53254831	53241924	53254831	-	ENST00000594681.5@ZNF677	ENST00000594681.5	protein_coding	53254599,53253086,53251536,53243744,53241924	53254831,53253156,53251605,53243897,53242330	Gene ID= ENSG00000197928.10 TPM= 1.06 Transcript Type= protein_coding
chr19	53395150	53412007	53395150	53412007	+	ENST00000396408.7@ZNF765	ENST00000396408.7	protein_coding	53395150,53397943,53402065,53407698	53395193,53398030,53402191,53412007	Gene ID= ENSG00000196417.12 TPM= 2.12 Transcript Type= protein_coding
chr19	53431984	53444670	53431984	53444670	+	ENST00000424846.3@TPM3P9	ENST00000424846.3	transcribed_processed_pseudogene	53431984,53441796	53432028,53444670	Gene ID= ENSG00000241015.2 TPM= 5.31 Transcript Type= processed_transcript
chr19	53538079	53578386	53538079	53578386	+	ENST00000411977.6@ZNF331	ENST00000411977.6	protein_coding	53538079,53539216,53555845,53569304,53571604,53576697	53538296,53539282,53555908,53569385,53571730,53578386	Gene ID= ENSG00000130844.16 TPM= 2.12 Transcript Type= protein_coding
chr19	53554530	53578389	53554530	53578389	+	ENST00000512387.5@ZNF331	ENST00000512387.5	protein_coding	53554530,53555845,53569304,53571604,53576697	53554693,53555908,53569385,53571730,53578389	Gene ID= ENSG00000130844.16 TPM= 1.06 Transcript Type= protein_coding
chr19	53866357	53876428	53866357	53876428	+	ENST00000336967.7@MYADM	ENST00000336967.7	protein_coding	53866357,53869754,53873528	53866417,53869838,53876428	Gene ID= ENSG00000179820.15 TPM= 77.54 Transcript Type= protein_coding
chr19	53867883	53876428	53867883	53876428	+	ENST00000391771.1@MYADM	ENST00000391771.1	protein_coding	53867883,53869690,53873528	53867943,53869838,53876428	Gene ID= ENSG00000179820.15 TPM= 81.79 Transcript Type= protein_coding
chr19	53867883	53876437	53867883	53876437	+	ENST00000391770.8@MYADM	ENST00000391770.8	protein_coding	53867883,53869754,53873528	53867943,53869838,53876437	Gene ID= ENSG00000179820.15 TPM= 97.72 Transcript Type= protein_coding
chr19	54102885	54106961	54102885	54106961	+	ENST00000303553.5@NDUFA3	ENST00000303553.5	protein_coding	54102885,54103114,54105934,54106811	54102959,54103188,54106011,54106961	Gene ID= ENSG00000170906.15 TPM= 32.22 Transcript Type= protein_coding
chr19	54102869	54106965	54102869	54106965	+	ENST00000391763.3@NDUFA3	ENST00000391763.3	protein_coding	54102869,54103114,54105934,54106811	54102898,54103188,54106011,54106965	Gene ID= ENSG00000170906.15 TPM= 246.95 Transcript Type= protein_coding
chr19	54102852	54106961	54102852	54106961	+	ENST00000391762.5@NDUFA3	ENST00000391762.5	protein_coding	54102852,54103114,54105934,54106353,54106811	54102888,54103188,54106011,54106446,54106961	Gene ID= ENSG00000170906.15 TPM= 4.25 Transcript Type= protein_coding
chr19	54102855	54106961	54102855	54106961	+	ENST00000451517.5@NDUFA3	ENST00000451517.5	protein_coding	54102855,54103114,54105597,54105934,54106811	54102888,54103188,54105703,54106011,54106961	Gene ID= ENSG00000170906.15 TPM= 16.81 Transcript Type= nonsense_mediated_decay
chr19	54107020	54115104	54107020	54115104	-	transcript6006.chr19.nnic@TFPT	transcript6006.chr19.nnic	protein_coding	54114961,54114442,54110051,54108326,54108026,54107020	54115104,54114700,54110121,54108395,54108244,54107169	Gene ID= ENSG00000105619.13 TPM= 7.97 Transcript Type= NA
chr19	54107013	54115675	54107013	54115675	-	ENST00000391759.5@TFPT	ENST00000391759.5	protein_coding	54115247,54114442,54110051,54108326,54108026,54107013	54115675,54114700,54110121,54108395,54108244,54107169	Gene ID= ENSG00000105619.13 TPM= 18.59 Transcript Type= protein_coding
chr19	54115457	54131709	54115457	54131709	+	ENST00000321030.8@PRPF31	ENST00000321030.8	protein_coding	54115457,54118271,54118573,54121860,54122497,54123454,54123749,54124499,54126528,54128073,54128305,54129057,54129272,54131307	54115797,54118455,54118633,54121943,54122594,54123560,54123918,54124656,54126617,54128200,54128377,54129185,54129370,54131709	Gene ID= ENSG00000105618.13 TPM= 97.19 Transcript Type= protein_coding
chr19	54115410	54131719	54115410	54131719	+	ENST00000419967.5@PRPF31	ENST00000419967.5	protein_coding	54115410,54118271,54118573,54121860,54122497,54123454,54123749,54124499,54126528,54128073,54128305,54129057,54131307	54115797,54118455,54118633,54121943,54122594,54123560,54123918,54124656,54126617,54128200,54128377,54129370,54131719	Gene ID= ENSG00000105618.13 TPM= 3.72 Transcript Type= protein_coding
chr19	54137728	54155681	54137728	54155681	+	ENST00000221232.9@CNOT3	ENST00000221232.9	protein_coding	54137728,54142929,54143119,54143442,54143660,54144006,54144237,54145598,54145910,54146601,54148148,54148620,54149560,54152226,54152428,54152867,54153715,54155309	54137993,54143003,54143186,54143516,54143749,54144134,54144332,54145817,54146043,54146657,54148535,54148743,54149758,54152325,54152626,54152999,54153840,54155681	Gene ID= ENSG00000088038.17 TPM= 8.5 Transcript Type= protein_coding
chr19	54155161	54159882	54155161	54159882	-	ENST00000222224.3@LENG1	ENST00000222224.3	protein_coding	54159564,54158282,54156763,54155161	54159882,54158461,54157025,54155940	Gene ID= ENSG00000105617.3 TPM= 11.68 Transcript Type= protein_coding
chr19	54160108	54172746	54160108	54172746	-	transcript6023.chr19.nnic@TMC4	transcript6023.chr19.nnic	protein_coding	54172429,54171870,54169512,54168448,54168171,54165419,54164434,54163724,54163033,54162673,54162102,54161130,54160878,54160467,54160108	54172746,54172206,54169660,54168680,54168292,54165566,54164601,54163887,54163159,54162770,54162285,54161260,54161033,54160545,54160374	Gene ID= ENSG00000167608.11 TPM= 3.19 Transcript Type= NA
chr19	54161318	54164449	54161318	54164449	-	transcript6025.chr19.nnic@NA	transcript6025.chr19.nnic	NA	54161318	54164449	Gene ID= novel_gene_chr19_6026 TPM= 5.31 Transcript Type= NA
chr19	54173415	54189815	54173415	54189815	-	ENST00000245615.5@MBOAT7	ENST00000245615.5	protein_coding	54189338,54188433,54188217,54187161,54183521,54180773,54178765,54173415	54189815,54188511,54188346,54187287,54183680,54181133,54178941,54174431	Gene ID= ENSG00000125505.16 TPM= 42.49 Transcript Type= protein_coding
chr19	54189404	54193666	54189404	54193666	+	transcript6030.chr19.nnic@TSEN34	transcript6030.chr19.nnic	protein_coding	54189404,54191361,54191721,54192116,54193175	54189596,54191607,54191964,54192373,54193666	Gene ID= ENSG00000170892.10 TPM= 7.65 Transcript Type= NA
chr19	54190060	54193666	54190060	54193666	+	transcript6031.chr19.nic@TSEN34	transcript6031.chr19.nic	protein_coding	54190060,54191361,54191721,54192116,54193175	54190162,54191607,54191964,54192373,54193666	Gene ID= ENSG00000170892.10 TPM= 3.4 Transcript Type= NA
chr19	54190259	54193666	54190259	54193666	+	transcript6033.chr19.nic@TSEN34	transcript6033.chr19.nic	protein_coding	54190259,54191361,54191721,54192116,54193175	54190371,54191607,54191964,54192373,54193666	Gene ID= ENSG00000170892.10 TPM= 4.46 Transcript Type= NA
chr19	54190731	54193666	54190731	54193666	+	ENST00000396383.5@TSEN34	ENST00000396383.5	protein_coding	54190731,54191361,54191721,54192116,54193175	54191037,54191607,54191964,54192373,54193666	Gene ID= ENSG00000170892.10 TPM= 3.4 Transcript Type= protein_coding
chr19	54191253	54193666	54191253	54193666	+	ENST00000396388.2@TSEN34	ENST00000396388.2	protein_coding	54191253,54191721,54192116,54193175	54191607,54191964,54192373,54193666	Gene ID= ENSG00000170892.10 TPM= 44.82 Transcript Type= protein_coding
chr19	54200742	54207647	54200742	54207647	+	ENST00000302907.8@RPS9	ENST00000302907.8	protein_coding	54200742,54201160,54201487,54206276,54207398	54200888,54201281,54201609,54206462,54207647	Gene ID= ENSG00000170889.13 TPM= 304.84 Transcript Type= protein_coding
chr19	54200872	54207647	54200872	54207647	+	ENST00000391752.5@RPS9	ENST00000391752.5	protein_coding	54200872,54201160,54201487,54206276,54207398	54200961,54201281,54201609,54206462,54207647	Gene ID= ENSG00000170889.13 TPM= 37.18 Transcript Type= protein_coding
chr19	54200874	54207647	54200874	54207647	+	ENST00000391751.7@RPS9	ENST00000391751.7	protein_coding	54200874,54201160,54201487,54207398	54200888,54201281,54201609,54207647	Gene ID= ENSG00000170889.13 TPM= 35.05 Transcript Type= protein_coding
chr19	54307070	54313139	54307070	54313139	-	ENST00000432233.7@LILRA5	ENST00000432233.7	protein_coding	54313017,54312537,54312335,54311864,54311414,54307698,54307070	54313139,54312621,54312370,54312148,54311716,54307748,54307549	Gene ID= ENSG00000187116.13 TPM= 1.06 Transcript Type= protein_coding
chr19	54448887	54462037	54448887	54462037	+	ENST00000326764.9@LENG8	ENST00000326764.9	protein_coding	54448887,54451290,54452093,54452651,54453546,54454430,54454951,54455364,54455967,54456325,54456636,54457747,54457934,54458103,54458314,54460766	54449310,54451382,54452267,54452752,54453656,54454682,54455092,54455567,54456245,54456465,54456921,54457848,54458002,54458232,54458521,54462037	Gene ID= ENSG00000167615.16 TPM= 73.29 Transcript Type= protein_coding
chr19	54449186	54462015	54449186	54462015	+	transcript6062.chr19.nic@LENG8	transcript6062.chr19.nic	protein_coding	54449186,54451290,54452093,54452651,54453546,54454430,54454951,54455364,54455967,54456325,54456636,54457747,54457934,54458103,54458314	54449306,54451382,54452267,54452752,54453656,54454682,54455092,54455567,54456245,54456465,54456921,54457848,54458002,54458232,54462015	Gene ID= ENSG00000167615.16 TPM= 90.28 Transcript Type= NA
chr19	54465026	54473264	54465026	54473264	-	ENST00000301200.2@CDC42EP5	ENST00000301200.2	protein_coding	54473064,54471545,54465026	54473264,54471685,54465547	Gene ID= ENSG00000167617.2 TPM= 10.62 Transcript Type= protein_coding
chr19	54633143	54637528	54633143	54637528	+	ENST00000462628.5@LILRB1	ENST00000462628.5	protein_coding	54633143,54633638,54633971,54634588,54635104,54635259,54635557,54636732	54633244,54633688,54634021,54634763,54635179,54635296,54636652,54637528	Gene ID= ENSG00000104972.15 TPM= 1.06 Transcript Type= processed_transcript
chr19	54663020	54668397	54663020	54668397	+	ENST00000391733.7@LILRB4	ENST00000391733.7	protein_coding	54663020,54663532,54663754,54664186,54664799,54665130,54665815,54666240,54666399,54666694,54667635,54667873	54663067,54663567,54664038,54664485,54664849,54665180,54665931,54666315,54666436,54666749,54667793,54668397	Gene ID= ENSG00000186818.12 TPM= 1.06 Transcript Type= protein_coding
chr19	55013705	55038264	55013705	55038264	-	ENST00000417454.5@GP6	ENST00000417454.5	protein_coding	55038203,55032506,55032139,55027578,55025218,55018652,55015683,55013705	55038264,55032538,55032396,55027862,55025271,55018711,55015733,55015165	Gene ID= ENSG00000088053.11 TPM= 1.06 Transcript Type= protein_coding
chr19	55039103	55063143	55039103	55063143	-	transcript6072.chr19.nnic@RDH13	transcript6072.chr19.nnic	protein_coding	55062968,55059157,55056653,55048659,55048329,55047387,55044905,55041322,55039103	55063143,55059275,55056808,55048763,55048541,55047488,55045309,55042136,55039259	Gene ID= ENSG00000160439.15 TPM= 2.66 Transcript Type= NA
chr19	55044324	55063143	55044324	55063143	-	transcript6077.chr19.nic@RDH13	transcript6077.chr19.nic	protein_coding	55062968,55059157,55056653,55048659,55048046,55047387,55044324	55063143,55059275,55056808,55048763,55048541,55047488,55045309	Gene ID= ENSG00000160439.15 TPM= 4.96 Transcript Type= NA
chr19	55044324	55063217	55044324	55063217	-	ENST00000610356.4@RDH13	ENST00000610356.4	protein_coding	55062968,55059157,55056653,55048659,55048329,55047387,55044324	55063217,55059275,55056808,55048763,55048541,55047488,55045309	Gene ID= ENSG00000160439.15 TPM= 71.35 Transcript Type= protein_coding
chr19	55044324	55063143	55044324	55063143	-	transcript6079.chr19.nic@RDH13	transcript6079.chr19.nic	protein_coding	55062968,55056653,55048659,55048329,55047387,55044324	55063143,55056808,55048763,55048541,55047488,55045309	Gene ID= ENSG00000160439.15 TPM= 4.96 Transcript Type= NA
chr19	55039108	55043107	55039108	55043107	-	ENST00000592423.1@RDH13	ENST00000592423.1	protein_coding	55040454,55039108	55043107,55039264	Gene ID= ENSG00000160439.15 TPM= 14.87 Transcript Type= processed_transcript
chr19	55090246	55092853	55090246	55092853	-	transcript6110.chr19.nnic@NA	transcript6110.chr19.nnic	NA	55090246	55092853	Gene ID= novel_gene_chr19_6111 TPM= 2.12 Transcript Type= NA
chr19	55090914	55117641	55090914	55117641	-	transcript6092.chr19.nic@PPP1R12C	transcript6092.chr19.nic	protein_coding	55117223,55112665,55112467,55103409,55098951,55098784,55096262,55096051,55095867,55095445,55095291,55094661,55094345,55093153,55093016,55092783,55092622,55092442,55092222,55091859,55091650,55090914	55117641,55112795,55112585,55103568,55099095,55098858,55096335,55096178,55095940,55095603,55095358,55094798,55094435,55093233,55093076,55092865,55092662,55092544,55092326,55091909,55091700,55091558	Gene ID= ENSG00000125503.12 TPM= 25.05 Transcript Type= NA
chr19	55090913	55117559	55090913	55117559	-	ENST00000263433.7@PPP1R12C	ENST00000263433.7	protein_coding	55117223,55112665,55112467,55103409,55098951,55098784,55096262,55096051,55095867,55095445,55095291,55094661,55094345,55093153,55093016,55092783,55092622,55092442,55092222,55091859,55091650,55090913	55117559,55112795,55112585,55103568,55099095,55098858,55096335,55096178,55095940,55095603,55095358,55094798,55094435,55093233,55093076,55092868,55092662,55092544,55092326,55091909,55091700,55091558	Gene ID= ENSG00000125503.12 TPM= 319.63 Transcript Type= protein_coding
chr19	55132794	55149206	55132794	55149206	-	ENST00000291901.12@TNNT1	ENST00000291901.12	protein_coding	55149161,55147126,55147008,55146681,55146434,55145544,55141857,55141186,55140883,55137961,55137103,55134066,55133887,55132794	55149206,55147168,55147021,55146707,55146466,55145565,55141920,55141302,55140960,55138074,55137212,55134156,55133927,55132960	Gene ID= ENSG00000105048.16 TPM= 153.27 Transcript Type= protein_coding
chr19	55132794	55149206	55132794	55149206	-	ENST00000356783.9@TNNT1	ENST00000356783.9	protein_coding	55149161,55147126,55147008,55146681,55145544,55141857,55141186,55140883,55137961,55137103,55134066,55133887,55132794	55149206,55147168,55147021,55146707,55145565,55141920,55141302,55140960,55138074,55137212,55134156,55133927,55132960	Gene ID= ENSG00000105048.16 TPM= 92.73 Transcript Type= protein_coding
chr19	55132835	55146949	55132835	55146949	-	ENST00000587465.6@TNNT1	ENST00000587465.6	protein_coding	55146681,55146434,55145544,55141857,55141186,55140883,55137961,55137103,55134066,55133887,55132835	55146949,55146466,55145565,55141920,55141302,55140960,55138074,55137212,55134156,55133927,55132960	Gene ID= ENSG00000105048.16 TPM= 28.47 Transcript Type= protein_coding
chr19	55151770	55157732	55151770	55157732	-	ENST00000344887.9@TNNI3	ENST00000344887.9	protein_coding	55157579,55157296,55157050,55156603,55156201,55154741,55154030,55151770	55157732,55157308,55157133,55156644,55156332,55154830,55154206,55151917	Gene ID= ENSG00000129991.12 TPM= 7257.31 Transcript Type= protein_coding
chr19	55151767	55156481	55151767	55156481	-	ENST00000585806.5@TNNI3	ENST00000585806.5	protein_coding	55156201,55154741,55154030,55151767	55156481,55154830,55154206,55151917	Gene ID= ENSG00000129991.12 TPM= 251.26 Transcript Type= retained_intron
chr19	55151771	55156725	55151771	55156725	-	ENST00000588882.1@TNNI3	ENST00000588882.1	protein_coding	55156603,55156201,55154741,55154030,55151771	55156725,55156332,55154830,55154206,55151917	Gene ID= ENSG00000129991.12 TPM= 72.32 Transcript Type= protein_coding
chr19	55160104	55166904	55160104	55166904	+	transcript6250.chr19.nnic@AC010327.3	transcript6250.chr19.nnic	antisense_RNA	55160104,55161095,55162752,55164544,55165819	55160168,55161214,55162801,55164800,55166904	Gene ID= ENSG00000267577.1 TPM= 37.71 Transcript Type= NA
chr19	55159153	55160492	55159153	55160492	+	transcript6276.chr19.nnic@NA	transcript6276.chr19.nnic	NA	55159153	55160492	Gene ID= novel_gene_chr19_6277 TPM= 3.19 Transcript Type= NA
chr19	55165023	55166487	55165023	55166487	-	transcript6278.chr19.nnic@NA	transcript6278.chr19.nnic	NA	55165023	55166487	Gene ID= novel_gene_chr19_6279 TPM= 94 Transcript Type= NA
chr19	55226639	55228773	55226639	55228773	-	ENST00000589190.1@TMEM86B	ENST00000589190.1	protein_coding	55228191,55226639	55228773,55227563	Gene ID= ENSG00000180089.5 TPM= 3.19 Transcript Type= retained_intron
chr19	55229780	55258995	55229780	55258995	-	ENST00000412770.6@PPP6R1	ENST00000412770.6	protein_coding	55258435,55246877,55245492,55245265,55245120,55242376,55242166,55241477,55241239,55240945,55240236,55239999,55239826,55239594,55239405,55236913,55236643,55232075,55231802,55231598,55231410,55230774,55230613,55229780	55258995,55247109,55245678,55245402,55245185,55242488,55242279,55241639,55241391,55241079,55240300,55240114,55239911,55239683,55239502,55236970,55236821,55232211,55231982,55231668,55231491,55230884,55230684,55230531	Gene ID= ENSG00000105063.18 TPM= 116.84 Transcript Type= protein_coding
chr19	55262353	55280125	55262353	55280125	-	transcript6233.chr19.nnic@HSPBP1	transcript6233.chr19.nnic	protein_coding	55280035,55279399,55277642,55274398,55266131,55265886,55265278,55262353	55280125,55279702,55277846,55274622,55266286,55265982,55265367,55262682	Gene ID= ENSG00000133265.10 TPM= 5.49 Transcript Type= NA
chr19	55262353	55280080	55262353	55280080	-	transcript6235.chr19.nic@HSPBP1	transcript6235.chr19.nic	protein_coding	55279930,55279399,55277642,55274398,55266131,55265886,55265278,55262353	55280080,55279702,55277846,55274622,55266286,55265982,55265389,55262682	Gene ID= ENSG00000133265.10 TPM= 10.27 Transcript Type= NA
chr19	55339853	55348120	55339853	55348120	+	ENST00000255613.7@KMT5C	ENST00000255613.7	protein_coding	55339853,55341794,55342215,55342742,55343680,55343978,55346213,55346500,55346956	55339957,55342046,55342380,55342851,55343843,55343997,55346349,55346687,55348120	Gene ID= ENSG00000133247.13 TPM= 1.59 Transcript Type= protein_coding
chr19	55339918	55348120	55339918	55348120	+	ENST00000445196.5@KMT5C	ENST00000445196.5	protein_coding	55339918,55341794,55342742,55343680,55343978,55346213,55346500,55346956	55339957,55342046,55342851,55343843,55343997,55346349,55346687,55348120	Gene ID= ENSG00000133247.13 TPM= 2.66 Transcript Type= nonsense_mediated_decay
chr19	55379245	55384598	55379245	55384598	-	ENST00000444469.3@TMEM238	ENST00000444469.3	protein_coding	55383722,55379245	55384598,55379367	Gene ID= ENSG00000233493.3 TPM= 3.19 Transcript Type= protein_coding
chr19	55385345	55392085	55385345	55392085	+	ENST00000344063.6@RPL28	ENST00000344063.6	protein_coding	55385345,55386350,55386570,55387930,55388243	55385965,55386438,55386693,55388048,55392085	Gene ID= ENSG00000108107.14 TPM= 3.19 Transcript Type= protein_coding
chr19	55385943	55388343	55385943	55388343	+	ENST00000560881.5@RPL28	ENST00000560881.5	protein_coding	55385943,55386350,55386570,55388243	55385965,55386438,55388048,55388343	Gene ID= ENSG00000108107.14 TPM= 3.19 Transcript Type= retained_intron
chr19	55385961	55388373	55385961	55388373	+	ENST00000559463.5@RPL28	ENST00000559463.5	protein_coding	55385961,55386570,55387930,55388243	55386438,55386693,55388048,55388373	Gene ID= ENSG00000108107.14 TPM= 48.86 Transcript Type= protein_coding
chr19	55452983	55461664	55452983	55461664	-	transcript6238.chr19.nnic@ISOC2	transcript6238.chr19.nnic	protein_coding	55461512,55456349,55455636,55455260,55454989,55453268,55452983	55461664,55456489,55455845,55455330,55455106,55453388,55453018	Gene ID= ENSG00000063241.7 TPM= 4.25 Transcript Type= NA
chr19	55452985	55462343	55452985	55462343	-	ENST00000438389.6@ISOC2	ENST00000438389.6	protein_coding	55461512,55456349,55455260,55454989,55452985	55462343,55456489,55455330,55455106,55453388	Gene ID= ENSG00000063241.7 TPM= 1.06 Transcript Type= protein_coding
chr19	55452989	55461569	55452989	55461569	-	ENST00000425675.6@ISOC2	ENST00000425675.6	protein_coding	55461512,55456349,55455636,55455260,55454989,55452989	55461569,55456489,55455845,55455330,55455106,55453388	Gene ID= ENSG00000063241.7 TPM= 7.44 Transcript Type= protein_coding
chr19	55485004	55487568	55485004	55487568	+	ENST00000205194.4@NAT14	ENST00000205194.4	protein_coding	55485004,55485661,55486408	55485258,55485780,55487568	Gene ID= ENSG00000090971.4 TPM= 4.25 Transcript Type= protein_coding
chr19	55591379	55599511	55591379	55599511	-	transcript6283.chr19.nnic@FIZ1	transcript6283.chr19.nnic	protein_coding	55599474,55595620,55591379	55599511,55595734,55593646	Gene ID= ENSG00000179943.7 TPM= 3.19 Transcript Type= NA
chr19	55591371	55599527	55591371	55599527	-	ENST00000221665.4@FIZ1	ENST00000221665.4	protein_coding	55599474,55597572,55591371	55599527,55597901,55593646	Gene ID= ENSG00000179943.7 TPM= 20.18 Transcript Type= protein_coding
chr19	55601879	55603138	55601879	55603138	+	ENST00000591046.1@ZNF524	ENST00000591046.1	protein_coding	55601879	55603138	Gene ID= ENSG00000171443.6 TPM= 5.31 Transcript Type= protein_coding
chr19	55600369	55603136	55600369	55603136	+	ENST00000301073.3@ZNF524	ENST00000301073.3	protein_coding	55600369,55602075	55600408,55603136	Gene ID= ENSG00000171443.6 TPM= 20.18 Transcript Type= protein_coding
chr19	55620742	55624601	55620742	55624601	-	ENST00000325351.4@ZNF784	ENST00000325351.4	protein_coding	55624484,55620742	55624601,55622644	Gene ID= ENSG00000179922.5 TPM= 24.43 Transcript Type= protein_coding
chr19	55640896	55643469	55640896	55643469	+	ENST00000325333.9@ZNF580	ENST00000325333.9	protein_coding	55640896,55642497	55641183,55643469	Gene ID= ENSG00000213015.8 TPM= 84.97 Transcript Type= protein_coding
chr19	55643547	55645622	55643547	55645622	+	ENST00000270451.5@ZNF581	ENST00000270451.5	protein_coding	55643547,55644553	55643774,55645622	Gene ID= ENSG00000171425.9 TPM= 6.37 Transcript Type= protein_coding
chr19	55648035	55653161	55648035	55653161	+	ENST00000308964.7@CCDC106	ENST00000308964.7	protein_coding	55648035,55649002,55649205,55649408,55651283,55652430	55648277,55649077,55649309,55649584,55651495,55653161	Gene ID= ENSG00000173581.7 TPM= 7.79 Transcript Type= protein_coding
chr19	55648143	55653161	55648143	55653161	+	ENST00000586790.5@CCDC106	ENST00000586790.5	protein_coding	55648143,55649205,55649408,55651283,55652430	55649077,55649309,55649584,55651495,55653161	Gene ID= ENSG00000173581.7 TPM= 14.69 Transcript Type= protein_coding
chr19	55648233	55653161	55648233	55653161	+	ENST00000591578.5@CCDC106	ENST00000591578.5	protein_coding	55648233,55648758,55649205,55649408,55651283,55652430	55648277,55649077,55649309,55649584,55651495,55653161	Gene ID= ENSG00000173581.7 TPM= 5.13 Transcript Type= protein_coding
chr19	55675211	55695766	55675211	55695766	+	transcript6290.chr19.nnic@EPN1	transcript6290.chr19.nnic	protein_coding	55675211,55678507,55685396,55688870,55689297,55689867,55691754,55692686,55692951,55694726,55695148	55675435,55678855,55685645,55688994,55689371,55689950,55692057,55692796,55693037,55694983,55695766	Gene ID= ENSG00000063245.14 TPM= 22.84 Transcript Type= NA
chr19	55675245	55695766	55675245	55695766	+	ENST00000085079.11@EPN1	ENST00000085079.11	protein_coding	55675245,55678527,55685396,55688870,55689867,55691754,55692686,55692954,55694726,55695148	55675435,55678855,55685645,55688994,55689950,55692057,55692796,55693037,55694983,55695766	Gene ID= ENSG00000063245.14 TPM= 142.86 Transcript Type= protein_coding
chr19	56087366	56121280	56087366	56121280	-	ENST00000610935.1@ZNF787	ENST00000610935.1	protein_coding	56121172,56103139,56087366	56121280,56103227,56089092	Gene ID= ENSG00000142409.5 TPM= 60.54 Transcript Type= protein_coding
chr19	56141187	56160892	56141187	56160892	+	ENST00000337080.7@ZNF444	ENST00000337080.7	protein_coding	56141187,56146247,56146890,56158494,56159624	56141357,56146420,56147208,56158602,56160892	Gene ID= ENSG00000167685.14 TPM= 18.59 Transcript Type= protein_coding
chr19	56141321	56160893	56141321	56160893	+	ENST00000592949.5@ZNF444	ENST00000592949.5	protein_coding	56141321,56146247,56146890,56158494,56159627	56141357,56146420,56147208,56158602,56160893	Gene ID= ENSG00000167685.14 TPM= 13.28 Transcript Type= protein_coding
chr19	56221312	56314874	56221312	56314874	-	transcript6314.chr19.nic@ZSCAN5A	transcript6314.chr19.nic	protein_coding	56314681,56313283,56224663,56223631,56222591,56221312	56314874,56313384,56225048,56223834,56222741,56222326	Gene ID= ENSG00000131848.9 TPM= 4.25 Transcript Type= NA
chr19	56221312	56314874	56221312	56314874	-	transcript6316.chr19.nic@ZSCAN5A	transcript6316.chr19.nic	protein_coding	56314681,56313283,56224663,56223631,56222591,56221312	56314874,56313384,56225173,56223834,56222741,56222326	Gene ID= ENSG00000131848.9 TPM= 3.19 Transcript Type= NA
chr19	56274504	56314859	56274504	56314859	-	ENST00000591078.5@ZSCAN5A	ENST00000591078.5	protein_coding	56314681,56313283,56274504	56314859,56313384,56274908	Gene ID= ENSG00000131848.9 TPM= 1.06 Transcript Type= processed_transcript
chr19	56280602	56314793	56280602	56314793	-	ENST00000585670.5@ZSCAN5A	ENST00000585670.5	protein_coding	56314681,56313283,56280602	56314793,56313384,56280700	Gene ID= ENSG00000131848.9 TPM= 1.06 Transcript Type= processed_transcript
chr19	56368139	56379553	56368139	56379553	+	ENST00000490123.5@ZNF542P	ENST00000490123.5	transcribed_unprocessed_pseudogene	56368139,56368866,56373157,56373531,56374686,56376867	56368460,56368936,56373283,56373623,56374825,56379553	Gene ID= ENSG00000240225.10 TPM= 8.5 Transcript Type= processed_transcript
chr19	56368319	56378350	56368319	56378350	+	ENST00000488113.5@ZNF542P	ENST00000488113.5	transcribed_unprocessed_pseudogene	56368319,56368866,56373157,56373531,56374686,56376867	56368460,56368936,56373283,56373623,56374757,56378350	Gene ID= ENSG00000240225.10 TPM= 1.06 Transcript Type= processed_transcript
chr19	56393667	56399168	56393667	56399168	+	transcript6339.chr19.nic@ZNF582-AS1	transcript6339.chr19.nic	lincRNA	56393667,56394217,56397881,56398277,56398894	56394053,56394441,56398048,56398383,56399168	Gene ID= ENSG00000267454.5 TPM= 2.12 Transcript Type= NA
chr19	56404356	56414800	56404356	56414800	+	ENST00000436972.3@ZNF583	ENST00000436972.3	protein_coding	56404356,56407026,56413959,56414345	56404452,56407123,56414085,56414800	Gene ID= ENSG00000198440.9 TPM= 1.06 Transcript Type= retained_intron
chr19	56439325	56477374	56439325	56477374	-	ENST00000292069.10@ZNF667	ENST00000292069.10	protein_coding	56477272,56462338,56460689,56458155,56439325	56477374,56462429,56460815,56458247,56442741	Gene ID= ENSG00000198046.11 TPM= 2.12 Transcript Type= protein_coding
chr19	56478131	56495432	56478131	56495432	+	ENST00000585445.1@ZNF667-AS1	ENST00000585445.1	lincRNA	56478131,56494163	56478381,56495432	Gene ID= ENSG00000166770.10 TPM= 26.55 Transcript Type= lincRNA
chr19	56536158	56538375	56536158	56538375	-	ENST00000587920.5@AC005498.2	ENST00000587920.5	lincRNA	56538253,56537651,56536158	56538375,56537737,56536332	Gene ID= ENSG00000267421.6 TPM= 1.06 Transcript Type= lincRNA
chr19	56538941	56553132	56538941	56553132	+	transcript6361.chr19.nnic@ZFP28	transcript6361.chr19.nnic	protein_coding	56538941,56539625,56547508,56547807,56548958,56550067,56550510,56550791	56539226,56539716,56547634,56547902,56549121,56550181,56550605,56553132	Gene ID= ENSG00000196867.7 TPM= 2.12 Transcript Type= NA
chr19	56538953	56553116	56538953	56553116	+	ENST00000591844.5@ZFP28	ENST00000591844.5	protein_coding	56538953,56539625,56547508,56547807,56548958,56550067,56550510	56539226,56539716,56547634,56547902,56549121,56550181,56553116	Gene ID= ENSG00000196867.7 TPM= 2.12 Transcript Type= protein_coding
chr19	56538948	56556810	56538948	56556810	+	ENST00000301318.7@ZFP28	ENST00000301318.7	protein_coding	56538948,56539625,56547508,56547807,56548958,56550067,56550510,56553684	56539226,56539716,56547634,56547902,56549121,56550181,56550605,56556810	Gene ID= ENSG00000196867.7 TPM= 4.25 Transcript Type= protein_coding
chr19	56567511	56582894	56567511	56582894	+	ENST00000330619.12@ZNF470	ENST00000330619.12	protein_coding	56567511,56568758,56570280,56574394,56574638,56576713	56568038,56568883,56570371,56574520,56574733,56582894	Gene ID= ENSG00000197016.11 TPM= 1.06 Transcript Type= protein_coding
chr19	56661981	56671760	56661981	56671760	-	ENST00000537055.3@ZNF835	ENST00000537055.3	protein_coding	56671576,56661981	56671760,56665245	Gene ID= ENSG00000127903.13 TPM= 1.06 Transcript Type= protein_coding
chr19	57216246	57219169	57216246	57219169	+	transcript6393.chr19.nnic@NA	transcript6393.chr19.nnic	NA	57216246	57219169	Gene ID= novel_gene_chr19_6394 TPM= 6.37 Transcript Type= NA
chr19	57240685	57255135	57240685	57255135	+	ENST00000354309.4@ZNF805	ENST00000354309.4	protein_coding	57240685,57248605,57253073	57240921,57248700,57255135	Gene ID= ENSG00000204524.6 TPM= 1.06 Transcript Type= protein_coding
chr19	57258439	57260502	57258439	57260502	-	transcript6395.chr19.nnic@NA	transcript6395.chr19.nnic	NA	57258439	57260502	Gene ID= novel_gene_chr19_6396 TPM= 8.5 Transcript Type= NA
chr19	57283503	57295361	57283503	57295361	-	transcript6400.chr19.nnic@AC005261.6	transcript6400.chr19.nnic	TEC	57290704,57283503	57295361,57284684	Gene ID= ENSG00000279541.1 TPM= 3.19 Transcript Type= NA
chr19	57297505	57300549	57297505	57300549	-	transcript6405.chr19.nnic@NA	transcript6405.chr19.nnic	NA	57297505	57300549	Gene ID= novel_gene_chr19_6406 TPM= 89.22 Transcript Type= NA
chr19	57300449	57305056	57300449	57305056	+	transcript6401.chr19.nnic@NA	transcript6401.chr19.nnic	NA	57300449	57305056	Gene ID= novel_gene_chr19_6402 TPM= 15.93 Transcript Type= NA
chr19	57304305	57308562	57304305	57308562	+	ENST00000593427.1@AC005261.2	ENST00000593427.1	lincRNA	57304305	57308562	Gene ID= ENSG00000268205.1 TPM= 13.81 Transcript Type= lincRNA
chr19	57320509	57330776	57320509	57330776	+	ENST00000321545.4@ZNF543	ENST00000321545.4	protein_coding	57320509,57323682,57326633,57327704	57320871,57323808,57326728,57330776	Gene ID= ENSG00000178229.7 TPM= 2.12 Transcript Type= protein_coding
chr19	57363567	57365309	57363567	57365309	+	ENST00000596755.1@AC003002.1	ENST00000596755.1	protein_coding	57363567	57365309	Gene ID= ENSG00000256060.2 TPM= 1.06 Transcript Type= protein_coding
chr19	57363511	57365353	57363511	57365353	+	ENST00000543226.1@AC003002.1	ENST00000543226.1	protein_coding	57363511,57364815	57363703,57365353	Gene ID= ENSG00000256060.2 TPM= 11.68 Transcript Type= protein_coding
chr19	57429155	57431258	57429155	57431258	+	transcript6430.chr19.nnic@NA	transcript6430.chr19.nnic	NA	57429155	57431258	Gene ID= novel_gene_chr19_6431 TPM= 2.12 Transcript Type= NA
chr19	57435347	57438457	57435347	57438457	+	ENST00000597296.1@ZNF749	ENST00000597296.1	protein_coding	57435347,57438102	57435667,57438457	Gene ID= ENSG00000186230.6 TPM= 1.06 Transcript Type= processed_transcript
chr19	57469586	57477570	57469586	57477570	-	ENST00000427512.6@ZNF772	ENST00000427512.6	protein_coding	57477277,57469586	57477570,57474421	Gene ID= ENSG00000197128.11 TPM= 6.37 Transcript Type= protein_coding
chr19	57487711	57494672	57487711	57494672	+	ENST00000426954.6@ZNF419	ENST00000426954.6	protein_coding	57487711,57491468,57492113,57492856	57487983,57491597,57492211,57494672	Gene ID= ENSG00000105136.20 TPM= 2.12 Transcript Type= protein_coding
chr19	57487723	57494668	57487723	57494668	+	transcript6445.chr19.nnic@ZNF419	transcript6445.chr19.nnic	protein_coding	57487723,57491471,57492113,57494368	57487983,57491597,57492211,57494668	Gene ID= ENSG00000105136.20 TPM= 3.19 Transcript Type= NA
chr19	57499941	57508161	57499941	57508161	+	ENST00000282292.8@ZNF773	ENST00000282292.8	protein_coding	57499941,57504657,57505302,57506358	57500113,57504786,57505400,57508161	Gene ID= ENSG00000152439.12 TPM= 1.06 Transcript Type= protein_coding
chr19	57527393	57540876	57527393	57540876	+	ENST00000376233.7@ZNF549	ENST00000376233.7	protein_coding	57527393,57531070,57535144,57537204	57527606,57531108,57535270,57540876	Gene ID= ENSG00000121406.8 TPM= 3.19 Transcript Type= protein_coding
chr19	57541836	57559863	57541836	57559863	-	ENST00000457177.5@ZNF550	ENST00000457177.5	protein_coding	57559656,57556231,57552627,57546457,57541836	57559863,57556357,57552722,57547993,57543243	Gene ID= ENSG00000251369.8 TPM= 4.25 Transcript Type= protein_coding
chr19	57541842	57559865	57541842	57559865	-	transcript6457.chr19.nnic@ZNF550	transcript6457.chr19.nnic	protein_coding	57559656,57556231,57552627,57541842	57559865,57556357,57552722,57543243	Gene ID= ENSG00000251369.8 TPM= 3.19 Transcript Type= NA
chr19	57571566	57578927	57571566	57578927	-	ENST00000196489.3@ZNF416	ENST00000196489.3	protein_coding	57578672,57578057,57575804,57571566	57578927,57578098,57575930,57573701	Gene ID= ENSG00000083817.8 TPM= 8.5 Transcript Type= protein_coding
chr19	57599877	57612722	57599877	57612722	+	transcript6470.chr19.nnic@ZNF530	transcript6470.chr19.nnic	protein_coding	57599877,57612503	57600134,57612722	Gene ID= ENSG00000183647.10 TPM= 6.37 Transcript Type= NA
chr19	57614251	57624723	57614251	57624723	+	ENST00000396161.9@ZNF134	ENST00000396161.9	protein_coding	57614251,57619412,57620160	57614503,57619508,57624723	Gene ID= ENSG00000213762.11 TPM= 2.12 Transcript Type= protein_coding
chr19	57633168	57642764	57633168	57642764	+	transcript6478.chr19.nnic@ZNF211	transcript6478.chr19.nnic	protein_coding	57633168,57633713,57634023,57634818,57639912,57640704	57633436,57633905,57634061,57634938,57640067,57642764	Gene ID= ENSG00000121417.13 TPM= 2.66 Transcript Type= NA
chr19	57633216	57642737	57633216	57642737	+	ENST00000299871.9@ZNF211	ENST00000299871.9	protein_coding	57633216,57634023,57634629,57639912,57640704	57633436,57634061,57634755,57640067,57642737	Gene ID= ENSG00000121417.13 TPM= 1.06 Transcript Type= protein_coding
chr19	57633228	57642768	57633228	57642768	+	ENST00000240731.4@ZNF211	ENST00000240731.4	protein_coding	57633228,57634023,57634629,57640704	57633436,57634061,57634755,57642768	Gene ID= ENSG00000121417.13 TPM= 1.59 Transcript Type= protein_coding
chr19	57719751	57727624	57719751	57727624	-	ENST00000317398.10@ZNF671	ENST00000317398.10	protein_coding	57727391,57723214,57722316,57719751	57727624,57723340,57722438,57721697	Gene ID= ENSG00000083814.13 TPM= 16.99 Transcript Type= protein_coding
chr19	57746796	57758148	57746796	57758148	+	transcript6497.chr19.nnic@ZNF776	transcript6497.chr19.nnic	protein_coding	57746796,57750785,57753291,57756872	57747091,57750911,57753379,57758148	Gene ID= ENSG00000152443.12 TPM= 2.66 Transcript Type= NA
chr19	57746796	57758159	57746796	57758159	+	ENST00000317178.9@ZNF776	ENST00000317178.9	protein_coding	57746796,57750785,57753291	57747091,57750911,57758159	Gene ID= ENSG00000152443.12 TPM= 2.12 Transcript Type= protein_coding
chr19	57746796	57758148	57746796	57758148	+	transcript6500.chr19.nic@ZNF776	transcript6500.chr19.nic	protein_coding	57746796,57750785,57756872	57747091,57750911,57758148	Gene ID= ENSG00000152443.12 TPM= 2.66 Transcript Type= NA
chr19	57769670	57780577	57769670	57780577	+	ENST00000396154.6@ZNF586	ENST00000396154.6	protein_coding	57769670,57776543,57778751	57769878,57776669,57780577	Gene ID= ENSG00000083828.15 TPM= 4.25 Transcript Type= protein_coding
chr19	57813736	57814402	57813736	57814402	-	transcript6528.chr19.nnic@NA	transcript6528.chr19.nnic	NA	57813736	57814402	Gene ID= novel_gene_chr19_6529 TPM= 3.19 Transcript Type= NA
chr19	57835363	57837199	57835363	57837199	-	transcript6530.chr19.nnic@NA	transcript6530.chr19.nnic	NA	57835363	57837199	Gene ID= novel_gene_chr19_6531 TPM= 2.12 Transcript Type= NA
chr19	57861775	57863372	57861775	57863372	-	transcript6526.chr19.nnic@NA	transcript6526.chr19.nnic	NA	57861775	57863372	Gene ID= novel_gene_chr19_6527 TPM= 5.31 Transcript Type= NA
chr19	57908480	57916591	57908480	57916591	-	ENST00000595559.1@ZNF417	ENST00000595559.1	protein_coding	57916379,57912060,57908480	57916591,57912186,57910114	Gene ID= ENSG00000173480.10 TPM= 1.06 Transcript Type= protein_coding
chr19	57906846	57916576	57906846	57916576	-	ENST00000312026.5@ZNF417	ENST00000312026.5	protein_coding	57916379,57912060,57906846	57916576,57912189,57910114	Gene ID= ENSG00000173480.10 TPM= 2.12 Transcript Type= protein_coding
chr19	57940833	57947671	57940833	57947671	-	ENST00000282308.3@ZNF256	ENST00000282308.3	protein_coding	57947442,57943934,57940833	57947671,57944060,57942647	Gene ID= ENSG00000152454.3 TPM= 6.37 Transcript Type= protein_coding
chr19	57958437	58002820	57958437	58002820	-	transcript6534.chr19.nnic@ZNF606	transcript6534.chr19.nnic	protein_coding	58002396,58001289,58000683,57999808,57988595,57988207,57978654,57974099,57972463,57966530,57961391,57958437	58002820,58001370,58000739,57999896,57988721,57988302,57980279,57974203,57972504,57966632,57961551,57958717	Gene ID= ENSG00000166704.11 TPM= 5.84 Transcript Type= NA
chr19	57958439	58002820	57958439	58002820	-	transcript6536.chr19.nnic@ZNF606	transcript6536.chr19.nnic	protein_coding	58002396,58001289,58000683,57999808,57988595,57988207,57978654,57974099,57972463,57966530,57961451,57958439	58002820,58001370,58000739,57999896,57988721,57988302,57980279,57974203,57972504,57966632,57961551,57958717	Gene ID= ENSG00000166704.11 TPM= 2.66 Transcript Type= NA
chr19	57977053	58003349	57977053	58003349	-	ENST00000341164.8@ZNF606	ENST00000341164.8	protein_coding	58002780,58001289,58000683,57999808,57988595,57988207,57977053	58003349,58001370,58000739,57999896,57988721,57988302,57980279	Gene ID= ENSG00000166704.11 TPM= 4.25 Transcript Type= protein_coding
chr19	57967294	57969594	57967294	57969594	+	transcript6543.chr19.nnic@NA	transcript6543.chr19.nnic	NA	57967294	57969594	Gene ID= novel_gene_chr19_6544 TPM= 7.44 Transcript Type= NA
chr19	58059239	58069755	58059239	58069755	+	ENST00000401053.8@ZNF135	ENST00000401053.8	protein_coding	58059239,58061580,58063446,58066705	58059310,58061706,58063541,58069755	Gene ID= ENSG00000176293.19 TPM= 3.19 Transcript Type= protein_coding
chr19	58059238	58069060	58059238	58069060	+	transcript6553.chr19.nic@ZNF135	transcript6553.chr19.nic	protein_coding	58059238,58061580,58063446,58066741	58059310,58061706,58063541,58069060	Gene ID= ENSG00000176293.19 TPM= 2.12 Transcript Type= NA
chr19	58083839	58098210	58083839	58098210	-	ENST00000240727.10@ZSCAN18	ENST00000240727.10	protein_coding	58097930,58089865,58088688,58087316,58086906,58086174,58083839	58098210,58090386,58088837,58087404,58087008,58086266,58085379	Gene ID= ENSG00000121413.12 TPM= 29.74 Transcript Type= protein_coding
chr19	58083859	58098254	58083859	58098254	-	transcript6558.chr19.nic@ZSCAN18	transcript6558.chr19.nic	protein_coding	58098115,58089865,58088688,58087316,58086906,58086174,58083859	58098254,58090386,58088837,58087404,58087008,58086266,58085379	Gene ID= ENSG00000121413.12 TPM= 21.24 Transcript Type= NA
chr19	58087637	58098282	58087637	58098282	-	transcript6565.chr19.nic@ZSCAN18	transcript6565.chr19.nic	protein_coding	58098174,58089865,58087637	58098282,58090386,58088837	Gene ID= ENSG00000121413.12 TPM= 9.56 Transcript Type= NA
chr19	58083859	58088583	58083859	58088583	-	transcript6568.chr19.nic@ZSCAN18	transcript6568.chr19.nic	protein_coding	58086174,58083859	58088583,58085379	Gene ID= ENSG00000121413.12 TPM= 8.5 Transcript Type= NA
chr19	58183041	58213562	58183041	58213562	+	transcript6573.chr19.nic@ZNF274	transcript6573.chr19.nic	protein_coding	58183041,58183921,58186947,58206720,58209961,58211560,58212161	58183442,58183998,58187042,58207202,58210073,58211686,58213562	Gene ID= ENSG00000171606.17 TPM= 4.96 Transcript Type= NA
chr19	58183404	58213562	58183404	58213562	+	transcript6574.chr19.nic@ZNF274	transcript6574.chr19.nic	protein_coding	58183404,58185712,58186947,58206720,58209961,58211560,58212161	58183998,58185838,58187042,58207202,58210073,58211686,58213562	Gene ID= ENSG00000171606.17 TPM= 11.86 Transcript Type= NA
chr19	58183029	58213562	58183029	58213562	+	ENST00000424679.6@ZNF274	ENST00000424679.6	protein_coding	58183029,58206720,58209961,58211560,58212161	58183442,58207202,58210073,58211686,58213562	Gene ID= ENSG00000171606.17 TPM= 4.43 Transcript Type= protein_coding
chr19	58183310	58213541	58183310	58213541	+	ENST00000617501.4@ZNF274	ENST00000617501.4	protein_coding	58183310,58183921,58185712,58186947,58206720,58209961,58211560,58212161	58183442,58183998,58185838,58187042,58207202,58210073,58211686,58213541	Gene ID= ENSG00000171606.17 TPM= 30.27 Transcript Type= protein_coding
chr19	58183427	58213552	58183427	58213552	+	ENST00000326804.8@ZNF274	ENST00000326804.8	protein_coding	58183427,58183921,58185697,58186947,58206720,58209961,58211560,58212161	58183442,58183998,58185838,58187042,58207202,58210073,58211686,58213552	Gene ID= ENSG00000171606.17 TPM= 2.66 Transcript Type= protein_coding
chr19	58228917	58277455	58228917	58277455	+	transcript6589.chr19.nic@ZNF544	transcript6589.chr19.nic	protein_coding	58228917,58229468,58230394,58243965,58246301,58246711,58277183	58228946,58229570,58230462,58244056,58246427,58246794,58277455	Gene ID= ENSG00000198131.13 TPM= 2.12 Transcript Type= NA
chr19	58248264	58249212	58248264	58249212	-	transcript6607.chr19.nnic@NA	transcript6607.chr19.nnic	NA	58248264	58249212	Gene ID= novel_gene_chr19_6608 TPM= 9.56 Transcript Type= NA
chr19	58259448	58278791	58259448	58278791	-	transcript6599.chr19.nnic@AC020915.4	transcript6599.chr19.nnic	antisense_RNA	58278523,58266868,58259448	58278791,58267025,58259691	Gene ID= ENSG00000268516.2 TPM= 2.12 Transcript Type= NA
chr19	58257270	58278808	58257270	58278808	-	ENST00000597230.2@AC020915.4	ENST00000597230.2	antisense_RNA	58278523,58257270	58278808,58259691	Gene ID= ENSG00000268516.2 TPM= 1.06 Transcript Type= antisense_RNA
chr19	58278951	58302805	58278951	58302805	+	ENST00000621650.1@ZNF8	ENST00000621650.1	protein_coding	58278951,58285717,58286110,58294098	58279147,58285843,58286205,58302805	Gene ID= ENSG00000278129.1 TPM= 3.19 Transcript Type= protein_coding
chr19	58278981	58280159	58278981	58280159	+	transcript6603.chr19.nnic@NA	transcript6603.chr19.nnic	NA	58278981	58280159	Gene ID= novel_gene_chr19_6604 TPM= 2.12 Transcript Type= NA
chr19	58305319	58315663	58305319	58315663	+	ENST00000413518.5@AC020915.1	ENST00000413518.5	protein_coding	58305319,58306088,58312166,58314748	58305445,58306216,58312462,58315663	Gene ID= ENSG00000142396.10 TPM= 28.68 Transcript Type= protein_coding
chr19	58309030	58315203	58309030	58315203	+	ENST00000590505.1@AC020915.1	ENST00000590505.1	protein_coding	58309030,58314748	58312462,58315203	Gene ID= ENSG00000142396.10 TPM= 1.06 Transcript Type= retained_intron
chr19	58305374	58315202	58305374	58315202	+	ENST00000427361.5@AC020915.1	ENST00000427361.5	protein_coding	58305374,58306088,58312197,58314748	58305445,58306216,58312462,58315202	Gene ID= ENSG00000142396.10 TPM= 4.25 Transcript Type= protein_coding
chr19	58314788	58326940	58314788	58326940	-	transcript6620.chr19.nic@AC010642.2	transcript6620.chr19.nic	antisense_RNA	58326823,58325275,58314788	58326940,58325361,58315036	Gene ID= ENSG00000283103.1 TPM= 26.55 Transcript Type= NA
chr19	58327019	58342332	58327019	58342332	+	ENST00000329665.4@ZSCAN22	ENST00000329665.4	protein_coding	58327019,58334752,58338254	58327114,58335205,58342332	Gene ID= ENSG00000182318.5 TPM= 3.19 Transcript Type= protein_coding
chr19	58346860	58347657	58346860	58347657	-	ENST00000598345.1@A1BG	ENST00000598345.1	protein_coding	58347353,58346860	58347657,58347029	Gene ID= ENSG00000121410.11 TPM= 1.06 Transcript Type= retained_intron
chr19	58387269	58394803	58387269	58394803	+	ENST00000196551.7@RPS5	ENST00000196551.7	protein_coding	58387269,58388137,58392976,58393359,58394497,58394682	58387339,58388245,58393185,58393487,58394595,58394803	Gene ID= ENSG00000083845.8 TPM= 251.38 Transcript Type= protein_coding
chr19	58387264	58394804	58387264	58394804	+	ENST00000598098.5@RPS5	ENST00000598098.5	protein_coding	58387264,58388137,58393359,58394497,58394682	58387339,58388245,58393487,58394595,58394804	Gene ID= ENSG00000083845.8 TPM= 4.43 Transcript Type= protein_coding
chr19	58408625	58418327	58408625	58418327	+	ENST00000306910.8@ZNF584	ENST00000306910.8	protein_coding	58408625,58409941,58415524,58416811	58409165,58410091,58415646,58418327	Gene ID= ENSG00000171574.17 TPM= 4.25 Transcript Type= protein_coding
chr19	58408665	58418310	58408665	58418310	+	transcript6634.chr19.nic@ZNF584	transcript6634.chr19.nic	protein_coding	58408665,58415524,58416811	58409165,58415646,58418310	Gene ID= ENSG00000171574.17 TPM= 9.56 Transcript Type= NA
chr19	58418192	58421924	58418192	58421924	+	transcript6636.chr19.nnic@AC012313.4	transcript6636.chr19.nnic	TEC	58418192,58419238,58421199	58418981,58419327,58421924	Gene ID= ENSG00000268543.1 TPM= 2.12 Transcript Type= NA
chr19	58432814	58440222	58432814	58440222	-	ENST00000254166.3@ZNF132	ENST00000254166.3	protein_coding	58439759,58437047,58432814	58440222,58437215,58435211	Gene ID= ENSG00000131849.11 TPM= 1.06 Transcript Type= protein_coding
chr19	58451604	58457833	58451604	58457833	+	ENST00000336614.8@ZNF324B	ENST00000336614.8	protein_coding	58451604,58453696,58454228,58455183	58451704,58453822,58454344,58457833	Gene ID= ENSG00000249471.7 TPM= 4.25 Transcript Type= protein_coding
chr19	58459112	58460425	58459112	58460425	-	transcript6645.chr19.nnic@NA	transcript6645.chr19.nnic	NA	58459112	58460425	Gene ID= novel_gene_chr19_6646 TPM= 2.12 Transcript Type= NA
chr19	58467096	58473398	58467096	58473398	+	ENST00000196482.3@ZNF324	ENST00000196482.3	protein_coding	58467096,58469180,58469728,58470731	58467183,58469306,58469844,58473398	Gene ID= ENSG00000083812.11 TPM= 14.87 Transcript Type= protein_coding
chr19	58475745	58481230	58475745	58481230	+	transcript6648.chr19.nic@ZNF446	transcript6648.chr19.nic	protein_coding	58475745,58477179,58477637,58478087,58479643,58479930,58480176	58476196,58477560,58477826,58478181,58479727,58480019,58481230	Gene ID= ENSG00000083838.15 TPM= 13.28 Transcript Type= NA
chr19	58476164	58481230	58476164	58481230	+	ENST00000594369.5@ZNF446	ENST00000594369.5	protein_coding	58476164,58477179,58477637,58478087,58479643,58479930,58480176	58476504,58477560,58477826,58478181,58479727,58480019,58481230	Gene ID= ENSG00000083838.15 TPM= 11.15 Transcript Type= protein_coding
chr19	58498333	58499275	58498333	58499275	-	ENST00000594786.1@SLC27A5	ENST00000594786.1	protein_coding	58499123,58498785,58498333	58499275,58498915,58498691	Gene ID= ENSG00000083807.9 TPM= 3.19 Transcript Type= protein_coding
chr19	58513530	58520222	58513530	58520222	-	ENST00000594051.5@ZBTB45	ENST00000594051.5	protein_coding	58519742,58516395,58513530	58520222,58517673,58514310	Gene ID= ENSG00000119574.12 TPM= 18.06 Transcript Type= protein_coding
chr19	58544469	58550716	58544469	58550716	+	ENST00000253024.9@TRIM28	ENST00000253024.9	protein_coding	58544469,58545425,58545764,58547376,58547597,58547792,58548034,58548294,58548486,58548740,58548862,58548988,58549331,58549737,58549949,58550147,58550377	58545097,58545537,58545896,58547511,58547713,58547906,58548180,58548408,58548592,58548776,58548910,58549240,58549650,58549860,58550035,58550284,58550716	Gene ID= ENSG00000130726.11 TPM= 132.77 Transcript Type= protein_coding
chr19	58551566	58555012	58551566	58555012	-	transcript6680.chr19.nic@CHMP2A	transcript6680.chr19.nic	protein_coding	58554777,58554045,58552259,58552055,58551906,58551566	58555012,58554236,58552438,58552185,58551967,58551776	Gene ID= ENSG00000130724.8 TPM= 10.18 Transcript Type= NA
chr19	58551566	58555165	58551566	58555165	-	transcript6684.chr19.nic@CHMP2A	transcript6684.chr19.nic	protein_coding	58554988,58554045,58552259,58552055,58551566	58555165,58554236,58552438,58552185,58551967	Gene ID= ENSG00000130724.8 TPM= 5.58 Transcript Type= NA
chr19	58551566	58555124	58551566	58555124	-	ENST00000312547.6@CHMP2A	ENST00000312547.6	protein_coding	58554988,58554045,58552259,58552055,58551906,58551566	58555124,58554236,58552438,58552185,58551967,58551776	Gene ID= ENSG00000130724.8 TPM= 89.84 Transcript Type= protein_coding
chr19	58551566	58554973	58551566	58554973	-	ENST00000601220.5@CHMP2A	ENST00000601220.5	protein_coding	58554865,58554045,58552259,58552055,58551906,58551566	58554973,58554236,58552438,58552185,58551967,58551776	Gene ID= ENSG00000130724.8 TPM= 29.29 Transcript Type= protein_coding
chr19	58555712	58558960	58555712	58558960	-	ENST00000253023.7@UBE2M	ENST00000253023.7	protein_coding	58558273,58557063,58556892,58556687,58556316,58555712	58558960,58557157,58556930,58556790,58556379,58556229	Gene ID= ENSG00000130725.7 TPM= 280.94 Transcript Type= protein_coding
chr19	58558667	58560283	58558667	58560283	+	transcript6705.chr19.nnic@NA	transcript6705.chr19.nnic	NA	58558667	58560283	Gene ID= novel_gene_chr19_6706 TPM= 2.12 Transcript Type= NA
chr19	58561933	58573575	58561933	58573575	-	ENST00000215057.6@MZF1	ENST00000215057.6	protein_coding	58573055,58570994,58570344,58569516,58569277,58561933	58573575,58571429,58570527,58569586,58569397,58563504	Gene ID= ENSG00000099326.8 TPM= 4.25 Transcript Type= protein_coding
chr19	58561933	58573575	58561933	58573575	-	ENST00000599369.5@MZF1	ENST00000599369.5	protein_coding	58573373,58570994,58570344,58569516,58569277,58561933	58573575,58571429,58570527,58569586,58569397,58563504	Gene ID= ENSG00000099326.8 TPM= 5.31 Transcript Type= protein_coding
chr19	58561931	58564613	58561931	58564613	-	ENST00000600004.1@MZF1	ENST00000600004.1	protein_coding	58561931	58564613	Gene ID= ENSG00000099326.8 TPM= 5.31 Transcript Type= retained_intron
chr19	58566864	58569969	58566864	58569969	-	transcript6707.chr19.nnic@NA	transcript6707.chr19.nnic	NA	58566864	58569969	Gene ID= novel_gene_chr19_6708 TPM= 3.19 Transcript Type= NA
chr19	58572858	58574796	58572858	58574796	+	transcript6703.chr19.nnic@NA	transcript6703.chr19.nnic	NA	58572858	58574796	Gene ID= novel_gene_chr19_6704 TPM= 4.25 Transcript Type= NA
chr19	58575460	58584397	58575460	58584397	+	ENST00000493504.1@CENPBD1P1	ENST00000493504.1	transcribed_processed_pseudogene	58575460,58581245	58575588,58584397	Gene ID= ENSG00000213753.10 TPM= 21.24 Transcript Type= processed_transcript
chr20	270863	290749	270863	290749	-	ENST00000360321.6@C20orf96	ENST00000360321.6	protein_coding	290591,290259,289559,283963,279172,278330,277226,277044,276793,275968,270863	290749,290307,289676,284081,279330,278429,277383,277145,276879,276086,271267	Gene ID= ENSG00000196476.11 TPM= 2.12 Transcript Type= protein_coding
chr20	296968	300321	296968	300321	+	ENST00000500893.3@ZCCHC3	ENST00000500893.3	protein_coding	296968	300321	Gene ID= ENSG00000247315.3 TPM= 61.61 Transcript Type= protein_coding
chr20	316596	318959	316596	318959	+	transcript20.chr20.nnic@NA	transcript20.chr20.nnic	NA	316596	318959	Gene ID= novel_gene_chr20_21 TPM= 12.75 Transcript Type= NA
chr20	320333	348224	320333	348224	-	ENST00000442637.1@NRSN2-AS1	ENST00000442637.1	antisense_RNA	348100,322378,320333	348224,322565,320781	Gene ID= ENSG00000225377.5 TPM= 5.31 Transcript Type= antisense_RNA
chr20	326414	328730	326414	328730	+	transcript24.chr20.nnic@NA	transcript24.chr20.nnic	NA	326414	328730	Gene ID= novel_gene_chr20_25 TPM= 12.75 Transcript Type= NA
chr20	329116	331706	329116	331706	+	transcript28.chr20.nnic@NA	transcript28.chr20.nnic	NA	329116	331706	Gene ID= novel_gene_chr20_29 TPM= 4.25 Transcript Type= NA
chr20	347112	354861	347112	354861	+	transcript5.chr20.nnic@NRSN2	transcript5.chr20.nnic	protein_coding	347112,349249,349616,353210	347142,349363,349832,354861	Gene ID= ENSG00000125841.12 TPM= 24.43 Transcript Type= NA
chr20	380617	397559	380617	397559	+	ENST00000217233.7@TRIB3	ENST00000217233.7	protein_coding	380617,388011,391287,396198	381169,388301,391579,397559	Gene ID= ENSG00000101255.10 TPM= 3.19 Transcript Type= protein_coding
chr20	408171	430966	408171	430966	+	ENST00000353660.7@RBCK1	ENST00000353660.7	protein_coding	408171,417526,417732,419347,419558,420871,422127,427313,428491,428951,430350	408779,417619,417930,419468,419731,421031,422238,427492,428589,429094,430966	Gene ID= ENSG00000125826.20 TPM= 20.71 Transcript Type= protein_coding
chr20	408053	430966	408053	430966	+	ENST00000356286.9@RBCK1	ENST00000356286.9	protein_coding	408053,409881,417526,417732,419347,419558,420871,422127,427313,428491,428951,430350	408779,410025,417619,417930,419468,419731,421031,422238,427492,428589,429094,430966	Gene ID= ENSG00000125826.20 TPM= 68.51 Transcript Type= protein_coding
chr20	435480	462568	435480	462568	-	transcript44.chr20.nic@TBC1D20	transcript44.chr20.nic	protein_coding	462336,447889,445050,441857,441588,440248,439108,438550,435480	462568,448074,445130,442043,441689,440389,439295,438841,437598	Gene ID= ENSG00000125875.13 TPM= 5.31 Transcript Type= NA
chr20	435480	462553	435480	462553	-	ENST00000354200.4@TBC1D20	ENST00000354200.4	protein_coding	462336,447889,445050,441857,441588,440248,439108,435480	462553,448074,445130,442043,441689,440389,439295,438841	Gene ID= ENSG00000125875.13 TPM= 18.06 Transcript Type= protein_coding
chr20	435480	462531	435480	462531	-	ENST00000461304.5@TBC1D20	ENST00000461304.5	protein_coding	462336,447889,445050,441857,441588,440248,439108,438550,437440,435480	462531,448074,445130,442043,441689,440389,439295,438841,437598,435970	Gene ID= ENSG00000125875.13 TPM= 1.06 Transcript Type= nonsense_mediated_decay
chr20	436283	462543	436283	462543	-	ENST00000494633.1@TBC1D20	ENST00000494633.1	protein_coding	462336,447889,445050,441588,440248,439108,436283	462543,448074,445130,442043,440389,439295,438841	Gene ID= ENSG00000125875.13 TPM= 9.56 Transcript Type= processed_transcript
chr20	461235	462515	461235	462515	-	transcript56.chr20.nnic@NA	transcript56.chr20.nnic	NA	461235	462515	Gene ID= novel_gene_chr20_57 TPM= 2.12 Transcript Type= NA
chr20	472498	543778	472498	543778	-	transcript59.chr20.nnic@CSNK2A1	transcript59.chr20.nnic	protein_coding	543672,508451,505118,499833,499255,497721,495719,492254,489780,488678,487427,486376,483928,472498	543778,508660,505229,499934,499305,497780,495802,492364,489881,488778,487575,486462,484076,473950	Gene ID= ENSG00000101266.17 TPM= 7.44 Transcript Type= NA
chr20	481097	543821	481097	543821	-	ENST00000217244.7@CSNK2A1	ENST00000217244.7	protein_coding	543672,527933,508451,505118,499833,499255,497721,495719,492254,489780,488678,487427,486376,481097	543821,528049,508660,505229,499934,499305,497780,495802,492364,489881,488778,487575,486462,484076	Gene ID= ENSG00000101266.17 TPM= 15.93 Transcript Type= protein_coding
chr20	481097	543821	481097	543821	-	ENST00000349736.9@CSNK2A1	ENST00000349736.9	protein_coding	543672,508451,505118,499833,499255,497721,495719,492254,489780,488678,487427,486376,481097	543821,508660,505229,499934,499305,497780,495802,492364,489881,488778,487575,486462,484076	Gene ID= ENSG00000101266.17 TPM= 18.06 Transcript Type= protein_coding
chr20	483701	543787	483701	543787	-	ENST00000400217.6@CSNK2A1	ENST00000400217.6	protein_coding	543672,505118,499833,499255,497721,495719,492254,489780,488678,487427,486376,483701	543787,505229,499934,499305,497780,495802,492364,489881,488778,487575,486462,484076	Gene ID= ENSG00000101266.17 TPM= 1.06 Transcript Type= protein_coding
chr20	603797	610398	603797	610398	-	ENST00000246080.3@TCF15	ENST00000246080.3	protein_coding	609713,603797	610398,604665	Gene ID= ENSG00000125878.6 TPM= 41.42 Transcript Type= protein_coding
chr20	604258	606337	604258	606337	-	transcript71.chr20.nnic@NA	transcript71.chr20.nnic	NA	604258	606337	Gene ID= novel_gene_chr20_72 TPM= 2.12 Transcript Type= NA
chr20	646615	653370	646615	653370	-	ENST00000381962.3@SRXN1	ENST00000381962.3	protein_coding	652976,646615	653370,648917	Gene ID= ENSG00000271303.1 TPM= 407.87 Transcript Type= protein_coding
chr20	760081	768584	760081	768584	-	ENST00000632431.1@SLC52A3	ENST00000632431.1	protein_coding	768297,765208,763498,761701,760081	768584,765825,764003,761824,761238	Gene ID= ENSG00000101276.14 TPM= 6.37 Transcript Type= protein_coding
chr20	841275	846279	841275	846279	+	ENST00000541082.2@FAM110A	ENST00000541082.2	protein_coding	841275,844708	841316,846279	Gene ID= ENSG00000125898.12 TPM= 2.12 Transcript Type= protein_coding
chr20	1118598	1168378	1118598	1168378	+	ENST00000335877.10@PSMF1	ENST00000335877.10	protein_coding	1118598,1125498,1127426,1135121,1163130,1164318,1165029	1118902,1125650,1127508,1135306,1163183,1164476,1168378	Gene ID= ENSG00000125818.17 TPM= 104.62 Transcript Type= protein_coding
chr20	1118598	1167328	1118598	1167328	+	ENST00000246015.8@PSMF1	ENST00000246015.8	protein_coding	1118598,1125498,1127426,1135121,1163130,1164318,1166227	1118902,1125650,1127508,1135306,1163183,1164476,1167328	Gene ID= ENSG00000125818.17 TPM= 64.26 Transcript Type= protein_coding
chr20	1118601	1138536	1118601	1138536	+	transcript90.chr20.nic@PSMF1	transcript90.chr20.nic	protein_coding	1118601,1125498,1127426,1135121	1118902,1125650,1127508,1138536	Gene ID= ENSG00000125818.17 TPM= 4.25 Transcript Type= NA
chr20	1325410	1378734	1325410	1378734	+	ENST00000609470.5@SDCBP2-AS1	ENST00000609470.5	antisense_RNA	1325410,1373078,1376798	1325529,1373178,1378734	Gene ID= ENSG00000234684.6 TPM= 1.06 Transcript Type= antisense_RNA
chr20	1368978	1393162	1368978	1393162	-	ENST00000400137.8@FKBP1A	ENST00000400137.8	protein_coding	1392962,1392834,1375491,1372076,1368978	1393162,1392881,1375603,1372240,1370072	Gene ID= ENSG00000088832.16 TPM= 167.11 Transcript Type= protein_coding
chr20	1368979	1393172	1368979	1393172	-	ENST00000439640.4@FKBP1A	ENST00000439640.4	protein_coding	1392962,1375491,1372076,1368979	1393172,1375603,1372240,1370072	Gene ID= ENSG00000088832.16 TPM= 12.57 Transcript Type= protein_coding
chr20	1368979	1393172	1368979	1393172	-	ENST00000618612.4@FKBP1A	ENST00000618612.4	protein_coding	1392962,1392834,1372076,1368979	1393172,1392881,1372240,1370072	Gene ID= ENSG00000088832.16 TPM= 13.63 Transcript Type= protein_coding
chr20	1442162	1467692	1442162	1467692	-	ENST00000216879.8@NSFL1C	ENST00000216879.8	protein_coding	1466720,1464329,1458200,1454967,1454213,1453031,1452493,1445666,1442162	1467692,1464426,1458274,1455132,1454305,1453140,1452630,1445830,1443911	Gene ID= ENSG00000088833.17 TPM= 16.99 Transcript Type= protein_coding
chr20	1442162	1466905	1442162	1466905	-	ENST00000555944.5@NSFL1C	ENST00000555944.5	protein_coding	1466720,1458200,1454967,1454213,1453031,1452493,1445666,1442162	1466905,1458274,1455037,1454305,1453140,1452630,1445830,1443911	Gene ID= ENSG00000088833.17 TPM= 8.5 Transcript Type= nonsense_mediated_decay
chr20	1894167	1939894	1894167	1939894	+	ENST00000400068.7@SIRPA	ENST00000400068.7	protein_coding	1894167,1895439,1915099,1921395,1922313,1924764,1927875,1934715,1937320	1894517,1895526,1915455,1921712,1922645,1924877,1927899,1934754,1939894	Gene ID= ENSG00000198053.11 TPM= 34.52 Transcript Type= protein_coding
chr20	1894915	1938414	1894915	1938414	+	transcript123.chr20.nnic@SIRPA	transcript123.chr20.nnic	protein_coding	1894915,1895439,1915099,1921395,1922313,1924764,1927875,1934715,1937320	1894966,1895526,1915455,1921712,1922645,1924877,1927899,1934754,1938414	Gene ID= ENSG00000198053.11 TPM= 4.78 Transcript Type= NA
chr20	2461634	2470806	2461634	2470806	-	transcript134.chr20.nic@SNRPB	transcript134.chr20.nic	protein_coding	2470688,2467607,2467192,2465708,2463747,2463089,2462636,2461634	2470806,2467758,2467315,2465819,2463899,2463227,2462761,2461939	Gene ID= ENSG00000125835.18 TPM= 6.9 Transcript Type= NA
chr20	2461634	2470853	2461634	2470853	-	ENST00000438552.6@SNRPB	ENST00000438552.6	protein_coding	2470688,2467607,2465708,2463747,2463089,2462636,2461634	2470853,2467758,2465819,2463899,2463227,2462761,2461793	Gene ID= ENSG00000125835.18 TPM= 14.87 Transcript Type= protein_coding
chr20	2461634	2470853	2461634	2470853	-	ENST00000381342.6@SNRPB	ENST00000381342.6	protein_coding	2470688,2467607,2465708,2463747,2463089,2462636,2461634	2470853,2467758,2465819,2463899,2463227,2462761,2461939	Gene ID= ENSG00000125835.18 TPM= 77.01 Transcript Type= protein_coding
chr20	2461660	2470732	2461660	2470732	-	ENST00000474384.2@SNRPB	ENST00000474384.2	protein_coding	2470688,2467607,2467192,2465708,2463747,2463089,2462636,2461660	2470732,2467758,2467315,2465819,2463899,2463227,2462761,2461793	Gene ID= ENSG00000125835.18 TPM= 1.06 Transcript Type= nonsense_mediated_decay
chr20	2481817	2508920	2481817	2508920	-	transcript140.chr20.nic@ZNF343	transcript140.chr20.nic	protein_coding	2508800,2500656,2493778,2493519,2492699,2481817	2508920,2500742,2494044,2493577,2492825,2484656	Gene ID= ENSG00000088876.11 TPM= 2.66 Transcript Type= NA
chr20	2481817	2509132	2481817	2509132	-	ENST00000278772.8@ZNF343	ENST00000278772.8	protein_coding	2508881,2500656,2493778,2493519,2492699,2481817	2509132,2500742,2494044,2493577,2492825,2484656	Gene ID= ENSG00000088876.11 TPM= 3.72 Transcript Type= protein_coding
chr20	2652145	2658393	2652145	2658393	+	ENST00000329276.9@NOP56	ENST00000329276.9	protein_coding	2652145,2652842,2653279,2654414,2654749,2655325,2655595,2655934,2656401,2656774,2657081,2657929	2652663,2652931,2653393,2654575,2654947,2655512,2655746,2656034,2656549,2656895,2657218,2658393	Gene ID= ENSG00000101361.16 TPM= 48.33 Transcript Type= protein_coding
chr20	2655413	2658392	2655413	2658392	+	ENST00000612233.1@NOP56	ENST00000612233.1	protein_coding	2655413	2658392	Gene ID= ENSG00000101361.16 TPM= 2.66 Transcript Type= retained_intron
chr20	2658394	2664219	2658394	2664219	-	transcript148.chr20.nnic@IDH3B	transcript148.chr20.nnic	protein_coding	2664153,2663925,2663660,2663446,2660909,2660697,2660457,2660263,2660030,2659699,2659525,2659109,2658394	2664219,2664005,2663758,2663566,2660969,2660829,2660590,2660365,2660176,2659793,2659585,2659312,2658837	Gene ID= ENSG00000101365.20 TPM= 4.78 Transcript Type= NA
chr20	2658395	2664219	2658395	2664219	-	ENST00000380851.9@IDH3B	ENST00000380851.9	protein_coding	2664153,2663925,2663660,2663446,2660909,2660697,2660457,2660263,2660030,2659699,2659525,2658395	2664219,2664005,2663758,2663566,2660969,2660829,2660590,2660365,2660176,2659793,2659585,2658522	Gene ID= ENSG00000101365.20 TPM= 141.53 Transcript Type= protein_coding
chr20	2658395	2664219	2658395	2664219	-	transcript156.chr20.nic@IDH3B	transcript156.chr20.nic	protein_coding	2664153,2663925,2663660,2663446,2660909,2660697,2660457,2660263,2660068,2659699,2659525,2658395	2664219,2664005,2663758,2663566,2660969,2660829,2660590,2660365,2660176,2659793,2659585,2658522	Gene ID= ENSG00000101365.20 TPM= 8.76 Transcript Type= NA
chr20	2658395	2664219	2658395	2664219	-	ENST00000380843.8@IDH3B	ENST00000380843.8	protein_coding	2664153,2663925,2663660,2663446,2660909,2660697,2660457,2660263,2660030,2659699,2659525,2658395	2664219,2664005,2663758,2663566,2660969,2660829,2660590,2660365,2660176,2659793,2659585,2658837	Gene ID= ENSG00000101365.20 TPM= 14.34 Transcript Type= protein_coding
chr20	2658395	2664189	2658395	2664189	-	ENST00000474315.5@IDH3B	ENST00000474315.5	protein_coding	2664153,2663925,2663660,2663446,2660909,2660697,2660457,2660263,2660030,2659699,2659525,2658759,2658395	2664189,2664005,2663758,2663566,2660969,2660829,2660590,2660365,2660176,2659793,2659585,2658837,2658522	Gene ID= ENSG00000101365.20 TPM= 1.33 Transcript Type= protein_coding
chr20	2695124	2696700	2695124	2696700	-	transcript178.chr20.nnic@NA	transcript178.chr20.nnic	NA	2695124	2696700	Gene ID= novel_gene_chr20_179 TPM= 2.12 Transcript Type= NA
chr20	2835314	2840692	2835314	2840692	-	ENST00000360652.6@PCED1A	ENST00000360652.6	protein_coding	2840211,2839789,2839192,2838844,2838596,2838232,2836039,2835314	2840692,2839933,2839271,2839082,2838746,2838478,2836314,2835709	Gene ID= ENSG00000132635.16 TPM= 6.37 Transcript Type= protein_coding
chr20	2840703	2866732	2840703	2866732	+	ENST00000380445.7@VPS16	ENST00000380445.7	protein_coding	2840703,2859719,2860054,2860239,2860449,2860748,2860970,2861225,2861615,2861805,2862054,2862579,2862807,2863065,2863290,2863949,2864179,2864365,2864547,2864978,2865148,2865399,2866212,2866430	2840827,2859807,2860151,2860367,2860593,2860863,2861092,2861280,2861704,2861899,2862130,2862710,2862934,2863100,2863398,2864083,2864287,2864462,2864654,2865055,2865317,2865495,2866315,2866732	Gene ID= ENSG00000215305.9 TPM= 43.55 Transcript Type= protein_coding
chr20	2840703	2866732	2840703	2866732	+	transcript188.chr20.nic@VPS16	transcript188.chr20.nic	protein_coding	2840703,2859719,2860054,2860239,2860449,2860748,2860970,2861225,2861615,2861805,2862054,2862579,2863065,2863290,2863949,2864365,2864547,2864978,2865148,2865399,2866212,2866430	2840827,2859807,2860151,2860367,2860593,2860863,2861092,2861280,2861704,2861899,2862130,2862934,2863100,2863398,2864287,2864462,2864654,2865055,2865317,2865495,2866315,2866732	Gene ID= ENSG00000215305.9 TPM= 3.19 Transcript Type= NA
chr20	2873477	3038668	2873477	3038668	+	transcript212.chr20.nnic@PTPRA	transcript212.chr20.nnic	protein_coding	2873477,2923207,2964272,2964861,2975215,2986765,2988032,2988338,3005056,3007344,3015849,3017816,3021309,3022054,3022689,3024472,3026687,3027121,3027707,3035585,3035790,3037154,3038059	2873760,2923285,2964350,2965202,2975241,2986849,2988105,2988474,3005146,3007420,3015885,3017913,3021428,3022220,3022824,3024621,3026780,3027197,3027841,3035710,3035941,3037289,3038668	Gene ID= ENSG00000132670.20 TPM= 3.19 Transcript Type= NA
chr20	2873482	3038356	2873482	3038356	+	transcript217.chr20.nic@PTPRA	transcript217.chr20.nic	protein_coding	2873482,2964272,2964861,2986765,2988032,2988338,3005056,3007344,3015849,3017816,3021309,3022054,3022689,3024472,3026687,3027121,3027707,3035585,3035790,3037154,3038059	2873760,2964350,2965202,2986849,2988105,2988474,3005146,3007420,3015885,3017913,3021428,3022220,3022824,3024621,3026780,3027197,3027841,3035710,3035941,3037289,3038356	Gene ID= ENSG00000132670.20 TPM= 3.19 Transcript Type= NA
chr20	2873496	3038668	2873496	3038668	+	ENST00000399903.6@PTPRA	ENST00000399903.6	protein_coding	2873496,2923207,2947982,2964272,2964861,2975215,2986765,2988032,2988338,3005056,3007344,3015849,3017816,3021309,3022054,3022689,3024472,3026687,3027121,3027707,3035585,3035790,3037154,3038059	2873760,2923285,2948024,2964350,2965202,2975241,2986849,2988105,2988474,3005146,3007420,3015885,3017913,3021428,3022220,3022824,3024621,3026780,3027197,3027841,3035710,3035941,3037289,3038668	Gene ID= ENSG00000132670.20 TPM= 26.55 Transcript Type= protein_coding
chr20	2873489	3039076	2873489	3039076	+	ENST00000216877.10@PTPRA	ENST00000216877.10	protein_coding	2873489,2923207,2947982,2964272,2964861,2986765,2988032,2988338,3005056,3007344,3015849,3017816,3021309,3022054,3022689,3024472,3026687,3027121,3027707,3035585,3035790,3037154,3038059	2873760,2923285,2948024,2964350,2965202,2986849,2988105,2988474,3005146,3007420,3015885,3017913,3021428,3022220,3022824,3024621,3026780,3027197,3027841,3035710,3035941,3037289,3039076	Gene ID= ENSG00000132670.20 TPM= 3.19 Transcript Type= protein_coding
chr20	3029542	3032157	3029542	3032157	-	transcript224.chr20.nnic@NA	transcript224.chr20.nnic	NA	3029542	3032157	Gene ID= novel_gene_chr20_225 TPM= 5.31 Transcript Type= NA
chr20	3046031	3048250	3046031	3048250	+	transcript228.chr20.nic@MRPS26	transcript228.chr20.nic	protein_coding	3046031,3046373,3046614	3046280,3046519,3048250	Gene ID= ENSG00000125901.5 TPM= 6.37 Transcript Type= NA
chr20	3045945	3048254	3045945	3048254	+	ENST00000380325.3@MRPS26	ENST00000380325.3	protein_coding	3045945,3046373,3046614,3047735	3046280,3046519,3046737,3048254	Gene ID= ENSG00000125901.5 TPM= 149.76 Transcript Type= protein_coding
chr20	3107573	3160196	3107573	3160196	-	ENST00000217173.6@UBOX5	ENST00000217173.6	protein_coding	3159766,3123312,3121384,3115305,3107573	3160196,3123406,3122584,3115466,3110314	Gene ID= ENSG00000185019.16 TPM= 5.31 Transcript Type= protein_coding
chr20	3107573	3160196	3107573	3160196	-	ENST00000348031.6@UBOX5	ENST00000348031.6	protein_coding	3159766,3123312,3121384,3107573	3160196,3123406,3122584,3110314	Gene ID= ENSG00000185019.16 TPM= 3.19 Transcript Type= protein_coding
chr20	3146519	3159897	3146519	3159897	-	ENST00000380266.3@FASTKD5	ENST00000380266.3	protein_coding	3159766,3146519	3159897,3149260	Gene ID= ENSG00000215251.3 TPM= 40.36 Transcript Type= protein_coding
chr20	3162618	3173597	3162618	3173597	-	transcript238.chr20.nnic@LZTS3	transcript238.chr20.nnic	protein_coding	3173455,3167801,3166705,3165497,3162618	3173597,3167961,3167183,3166360,3165152	Gene ID= ENSG00000088899.14 TPM= 6.9 Transcript Type= NA
chr20	3162618	3173577	3162618	3173577	-	transcript241.chr20.nnic@LZTS3	transcript241.chr20.nnic	protein_coding	3173455,3166705,3165497,3162618	3173577,3167181,3166360,3165152	Gene ID= ENSG00000088899.14 TPM= 5.84 Transcript Type= NA
chr20	3178167	3179868	3178167	3179868	-	transcript243.chr20.nnic@NA	transcript243.chr20.nnic	NA	3178167	3179868	Gene ID= novel_gene_chr20_244 TPM= 3.19 Transcript Type= NA
chr20	3183706	3189242	3183706	3189242	-	transcript254.chr20.nnic@NA	transcript254.chr20.nnic	NA	3183706	3189242	Gene ID= novel_gene_chr20_255 TPM= 4.25 Transcript Type= NA
chr20	3190523	3204700	3190523	3204700	-	transcript252.chr20.nic@DDRGK1	transcript252.chr20.nic	protein_coding	3204537,3203213,3200342,3200001,3195231,3194830,3191190,3190523	3204700,3203416,3200454,3200102,3195353,3194868,3191821,3190819	Gene ID= ENSG00000198171.12 TPM= 7.44 Transcript Type= NA
chr20	3190350	3204685	3190350	3204685	-	ENST00000354488.7@DDRGK1	ENST00000354488.7	protein_coding	3204537,3203213,3200342,3200001,3195231,3194830,3191765,3191190,3190350	3204685,3203416,3200454,3200102,3195353,3194868,3191821,3191238,3190819	Gene ID= ENSG00000198171.12 TPM= 3.19 Transcript Type= protein_coding
chr20	3209360	3223870	3209360	3223870	+	ENST00000380113.7@ITPA	ENST00000380113.7	protein_coding	3209360,3213169,3213319,3213985,3215281,3218517,3221841,3223366	3209617,3213226,3213383,3214058,3215312,3218632,3221917,3223870	Gene ID= ENSG00000125877.12 TPM= 36.11 Transcript Type= protein_coding
chr20	3216459	3219091	3216459	3219091	-	transcript257.chr20.nnic@NA	transcript257.chr20.nnic	NA	3216459	3219091	Gene ID= novel_gene_chr20_258 TPM= 2.12 Transcript Type= NA
chr20	3249305	3407625	3249305	3407625	-	ENST00000252032.9@C20orf194	ENST00000252032.9	protein_coding	3407475,3382427,3381379,3376178,3375030,3374048,3359516,3348525,3343676,3340504,3332280,3330646,3326197,3324892,3322652,3322217,3318289,3316723,3315735,3315033,3304440,3298029,3296861,3294528,3294139,3290129,3287632,3281641,3278912,3270427,3264438,3259922,3259480,3256006,3255219,3253726,3249305	3407625,3382506,3381498,3376302,3375126,3374154,3359593,3348623,3343731,3340639,3332361,3330682,3326284,3324968,3322696,3322262,3318400,3316793,3315785,3315120,3304543,3298175,3296949,3294629,3294256,3290217,3287790,3281766,3278949,3270562,3264524,3260028,3259554,3256211,3255284,3253819,3252684	Gene ID= ENSG00000088854.12 TPM= 27.62 Transcript Type= protein_coding
chr20	3470998	3629294	3470998	3629294	+	transcript268.chr20.nnic@ATRN	transcript268.chr20.nnic	protein_coding	3470998,3535253,3540222,3545762,3547284,3549170,3559393,3560662,3562276,3563209,3565348,3572731,3575827,3576859,3578582,3582135,3583898,3584647,3591169,3594479,3596377,3597906,3600946,3604105,3624511,3628900	3471517,3535336,3540335,3545890,3547489,3549338,3559483,3560905,3562459,3563363,3565432,3572951,3575948,3576997,3578772,3582354,3584083,3584880,3591306,3594572,3596429,3598000,3601024,3604262,3624572,3629294	Gene ID= ENSG00000088812.17 TPM= 13.81 Transcript Type= NA
chr20	3732662	3741327	3732662	3741327	+	transcript307.chr20.nic@HSPA12B	transcript307.chr20.nic	protein_coding	3732662,3738658	3732794,3741327	Gene ID= ENSG00000132622.10 TPM= 3.19 Transcript Type= NA
chr20	3732667	3753111	3732667	3753111	+	ENST00000254963.6@HSPA12B	ENST00000254963.6	protein_coding	3732667,3738658,3740815,3742284,3744902,3745493,3745915,3748217,3749232,3749750,3749969,3750804,3751511	3732794,3738717,3740912,3742408,3745088,3745597,3746031,3748391,3749318,3749854,3750227,3750907,3753111	Gene ID= ENSG00000132622.10 TPM= 21.24 Transcript Type= protein_coding
chr20	3732711	3753111	3732711	3753111	+	ENST00000399701.1@HSPA12B	ENST00000399701.1	protein_coding	3732711,3738658,3742284,3744902,3745493,3745915,3748217,3749232,3749750,3749969,3750804,3751511	3732794,3738717,3742408,3745088,3745597,3746031,3748391,3749318,3749854,3750227,3750907,3753111	Gene ID= ENSG00000132622.10 TPM= 10.62 Transcript Type= protein_coding
chr20	3734739	3738139	3734739	3738139	-	transcript316.chr20.nnic@NA	transcript316.chr20.nnic	NA	3734739	3738139	Gene ID= novel_gene_chr20_317 TPM= 5.31 Transcript Type= NA
chr20	3753508	3768387	3753508	3768387	-	ENST00000379772.3@C20orf27	ENST00000379772.3	protein_coding	3767663,3760082,3758536,3755469,3754397,3753508	3768387,3760186,3758678,3755607,3754519,3754158	Gene ID= ENSG00000101220.17 TPM= 24.43 Transcript Type= protein_coding
chr20	3753508	3767802	3753508	3767802	-	transcript295.chr20.nic@C20orf27	transcript295.chr20.nic	protein_coding	3767663,3760082,3758536,3753508	3767802,3760186,3758678,3755607	Gene ID= ENSG00000101220.17 TPM= 2.12 Transcript Type= NA
chr20	3753508	3758678	3753508	3758678	-	ENST00000399683.7@C20orf27	ENST00000399683.7	protein_coding	3758536,3755469,3753508	3758678,3755607,3754158	Gene ID= ENSG00000101220.17 TPM= 4.25 Transcript Type= protein_coding
chr20	3783851	3786759	3783851	3786759	-	transcript318.chr20.nnic@NA	transcript318.chr20.nnic	NA	3783851	3786759	Gene ID= novel_gene_chr20_319 TPM= 22.31 Transcript Type= NA
chr20	3820531	3825302	3820531	3825302	+	ENST00000379573.6@AP5S1	ENST00000379573.6	protein_coding	3820531,3822102,3823875	3820758,3822293,3825302	Gene ID= ENSG00000125843.10 TPM= 6.37 Transcript Type= protein_coding
chr20	3820536	3825302	3820536	3825302	+	ENST00000379567.6@AP5S1	ENST00000379567.6	protein_coding	3820536,3822102,3823871	3820702,3822293,3825302	Gene ID= ENSG00000125843.10 TPM= 4.25 Transcript Type= protein_coding
chr20	3853955	3854514	3853955	3854514	-	transcript322.chr20.nnic@NA	transcript322.chr20.nnic	NA	3853955	3854514	Gene ID= novel_gene_chr20_323 TPM= 2.12 Transcript Type= NA
chr20	3871112	3875451	3871112	3875451	+	transcript312.chr20.nnic@NA	transcript312.chr20.nnic	NA	3871112	3875451	Gene ID= novel_gene_chr20_313 TPM= 16.99 Transcript Type= NA
chr20	3889372	3908619	3889372	3908619	+	transcript341.chr20.nic@PANK2	transcript341.chr20.nic	protein_coding	3889372,3907926	3889728,3908619	Gene ID= ENSG00000125779.21 TPM= 2.12 Transcript Type= NA
chr20	3889415	3923702	3889415	3923702	+	ENST00000610179.5@PANK2	ENST00000610179.5	protein_coding	3889415,3907926,3910577,3912458,3916927,3918671,3923244	3889728,3908278,3910830,3912634,3917050,3918796,3923702	Gene ID= ENSG00000125779.21 TPM= 6.37 Transcript Type= protein_coding
chr20	3929222	3929882	3929222	3929882	+	ENST00000621891.1@PANK2	ENST00000621891.1	protein_coding	3929222	3929882	Gene ID= ENSG00000125779.21 TPM= 1.06 Transcript Type= processed_transcript
chr20	3933064	4015588	3933064	4015588	-	transcript345.chr20.nic@RNF24	transcript345.chr20.nic	protein_coding	4015437,3963875,3948237,3945177,3933064	4015588,3964024,3948279,3945218,3935073	Gene ID= ENSG00000101236.16 TPM= 2.12 Transcript Type= NA
chr20	4148779	4187747	4148779	4187747	+	ENST00000339123.10@SMOX	ENST00000339123.10	protein_coding	4148779,4175030,4177351,4181803,4182089,4182483,4183494,4187270	4148977,4175263,4177577,4181976,4182323,4182848,4183654,4187747	Gene ID= ENSG00000088826.17 TPM= 1.06 Transcript Type= protein_coding
chr20	4148779	4187747	4148779	4187747	+	ENST00000305958.8@SMOX	ENST00000305958.8	protein_coding	4148779,4175030,4177351,4181803,4182089,4183494,4187270	4148977,4175263,4177577,4181976,4182848,4183654,4187747	Gene ID= ENSG00000088826.17 TPM= 4.25 Transcript Type= protein_coding
chr20	4170474	4172079	4170474	4172079	-	transcript350.chr20.nnic@NA	transcript350.chr20.nnic	NA	4170474	4172079	Gene ID= novel_gene_chr20_351 TPM= 2.12 Transcript Type= NA
chr20	4686236	4701590	4686236	4701590	+	ENST00000379440.8@PRNP	ENST00000379440.8	protein_coding	4686236,4699211	4686512,4701590	Gene ID= ENSG00000171867.16 TPM= 342.02 Transcript Type= protein_coding
chr20	4686350	4701590	4686350	4701590	+	ENST00000430350.2@PRNP	ENST00000430350.2	protein_coding	4686350,4699211	4686508,4701590	Gene ID= ENSG00000171867.16 TPM= 161.45 Transcript Type= protein_coding
chr20	5099840	5113042	5099840	5113042	-	ENST00000379286.6@TMEM230	ENST00000379286.6	protein_coding	5112743,5111500,5109332,5106188,5099840	5113042,5111605,5109445,5106310,5100931	Gene ID= ENSG00000089063.14 TPM= 4.88 Transcript Type= protein_coding
chr20	5099840	5113087	5099840	5113087	-	ENST00000342308.9@TMEM230	ENST00000342308.9	protein_coding	5112961,5111500,5109332,5106188,5099840	5113087,5111605,5109445,5106310,5100931	Gene ID= ENSG00000089063.14 TPM= 5.94 Transcript Type= protein_coding
chr20	5099840	5113087	5099840	5113087	-	transcript358.chr20.nnic@TMEM230	transcript358.chr20.nnic	protein_coding	5112961,5109332,5106188,5099840	5113087,5109445,5106222,5100931	Gene ID= ENSG00000089063.14 TPM= 8.9 Transcript Type= NA
chr20	5099840	5113103	5099840	5113103	-	ENST00000202834.11@TMEM230	ENST00000202834.11	protein_coding	5112961,5109332,5106188,5099840	5113103,5109445,5106310,5100931	Gene ID= ENSG00000089063.14 TPM= 155.17 Transcript Type= protein_coding
chr20	5099840	5113042	5099840	5113042	-	ENST00000379299.6@TMEM230	ENST00000379299.6	protein_coding	5112730,5109332,5106188,5099840	5113042,5109445,5106310,5100931	Gene ID= ENSG00000089063.14 TPM= 44.71 Transcript Type= protein_coding
chr20	5099840	5113049	5099840	5113049	-	ENST00000379279.6@TMEM230	ENST00000379279.6	protein_coding	5112743,5109332,5106188,5099840	5113049,5109445,5106310,5100931	Gene ID= ENSG00000089063.14 TPM= 20.28 Transcript Type= protein_coding
chr20	5099840	5113050	5099840	5113050	-	ENST00000379283.6@TMEM230	ENST00000379283.6	protein_coding	5112720,5109332,5106188,5099840	5113050,5109445,5106310,5100931	Gene ID= ENSG00000089063.14 TPM= 4.34 Transcript Type= protein_coding
chr20	5114953	5120026	5114953	5120026	-	ENST00000379143.9@PCNA	ENST00000379143.9	protein_coding	5119578,5118769,5118610,5117470,5115449,5114953	5120026,5118866,5118677,5117664,5115572,5115362	Gene ID= ENSG00000132646.10 TPM= 15.4 Transcript Type= protein_coding
chr20	5114953	5126626	5114953	5126626	-	ENST00000379160.3@PCNA	ENST00000379160.3	protein_coding	5126500,5119578,5118769,5118610,5117470,5115449,5114953	5126626,5119914,5118866,5118677,5117664,5115572,5115362	Gene ID= ENSG00000132646.10 TPM= 7.97 Transcript Type= protein_coding
chr20	5126786	5197887	5126786	5197887	+	ENST00000460006.5@CDS2	ENST00000460006.5	protein_coding	5126786,5173523,5175183,5176648,5178817,5182387,5183061,5184858,5185758,5186687,5189067,5189735,5190102	5127149,5173659,5175279,5176745,5178956,5182445,5183143,5184945,5185826,5186839,5189186,5189838,5197887	Gene ID= ENSG00000101290.13 TPM= 106.22 Transcript Type= protein_coding
chr20	5197235	5199559	5197235	5199559	-	transcript380.chr20.nnic@NA	transcript380.chr20.nnic	NA	5197235	5199559	Gene ID= novel_gene_chr20_381 TPM= 19.12 Transcript Type= NA
chr20	5217214	5219367	5217214	5219367	-	transcript382.chr20.nnic@NA	transcript382.chr20.nnic	NA	5217214	5219367	Gene ID= novel_gene_chr20_383 TPM= 12.75 Transcript Type= NA
chr20	5490918	5491957	5490918	5491957	-	transcript384.chr20.nnic@NA	transcript384.chr20.nnic	NA	5490918	5491957	Gene ID= novel_gene_chr20_385 TPM= 2.12 Transcript Type= NA
chr20	5496067	5504613	5496067	5504613	-	ENST00000379053.4@LINC00654	ENST00000379053.4	lincRNA	5504298,5496067	5504613,5501863	Gene ID= ENSG00000205181.5 TPM= 1.06 Transcript Type= lincRNA
chr20	5557847	5611024	5557847	5611024	-	transcript394.chr20.nic@GPCPD1	transcript394.chr20.nic	protein_coding	5610842,5604364,5598725,5593327,5586194,5584281,5580008,5578380,5575816,5575413,5573915,5570147,5567483,5566733,5565017,5561465,5559940,5558684,5557847	5611024,5604440,5598821,5593411,5586269,5584322,5580131,5578611,5575978,5575545,5573969,5570239,5567560,5566772,5565078,5561530,5560076,5558819,5558105	Gene ID= ENSG00000125772.12 TPM= 5.31 Transcript Type= NA
chr20	5544439	5586037	5544439	5586037	-	ENST00000481038.5@GPCPD1	ENST00000481038.5	protein_coding	5584281,5580008,5578380,5575816,5575413,5573915,5570147,5567483,5566733,5565017,5561465,5559940,5558684,5557945,5544439	5586037,5580131,5578611,5575978,5575545,5573969,5570239,5567560,5566772,5565078,5561530,5560076,5558819,5558105,5547850	Gene ID= ENSG00000125772.12 TPM= 2.12 Transcript Type= retained_intron
chr20	5544404	5611026	5544404	5611026	-	ENST00000379019.5@GPCPD1	ENST00000379019.5	protein_coding	5610842,5604364,5598725,5593327,5586194,5584281,5580008,5578380,5575816,5575413,5573915,5570147,5567483,5566733,5565017,5561465,5559940,5558684,5557945,5544404	5611026,5604440,5598821,5593411,5586269,5584322,5580131,5578611,5575978,5575545,5573969,5570239,5567560,5566772,5565078,5561530,5560076,5558819,5558105,5547850	Gene ID= ENSG00000125772.12 TPM= 4.25 Transcript Type= protein_coding
chr20	5750397	5863912	5750397	5863912	+	ENST00000303142.10@C20orf196	ENST00000303142.10	protein_coding	5750397,5772862,5863024	5750479,5773043,5863912	Gene ID= ENSG00000171984.14 TPM= 1.06 Transcript Type= protein_coding
chr20	5911430	5925361	5911430	5925361	+	ENST00000378961.8@CHGB	ENST00000378961.8	protein_coding	5911430,5916326,5916826,5922335,5924972	5911682,5916372,5916919,5924100,5925361	Gene ID= ENSG00000089199.9 TPM= 18.06 Transcript Type= protein_coding
chr20	5937833	5950536	5937833	5950536	-	ENST00000203001.6@TRMT6	ENST00000203001.6	protein_coding	5950278,5946406,5944805,5944162,5943948,5943559,5942428,5941951,5941243,5941053,5937833	5950536,5946533,5944914,5944253,5944031,5943683,5942786,5942036,5941345,5941139,5938726	Gene ID= ENSG00000089195.14 TPM= 24.43 Transcript Type= protein_coding
chr20	5937833	5950558	5937833	5950558	-	ENST00000453074.6@TRMT6	ENST00000453074.6	protein_coding	5950278,5946406,5944162,5943948,5943559,5942428,5941951,5941243,5941053,5937833	5950558,5946533,5944253,5944031,5943683,5942786,5942036,5941345,5941139,5938726	Gene ID= ENSG00000089195.14 TPM= 1.06 Transcript Type= protein_coding
chr20	6006110	6037393	6006110	6037393	+	transcript415.chr20.nnic@CRLS1	transcript415.chr20.nnic	protein_coding	6006110,6006667,6009775,6015361,6031285,6032012,6034464,6037074	6006552,6006834,6009912,6015490,6031370,6032080,6034555,6037393	Gene ID= ENSG00000088766.11 TPM= 8.5 Transcript Type= NA
chr20	6006093	6040043	6006093	6040043	+	ENST00000452938.5@CRLS1	ENST00000452938.5	protein_coding	6006093,6009775,6015361,6032012,6034464,6037074	6006552,6009912,6015490,6032080,6034555,6040043	Gene ID= ENSG00000088766.11 TPM= 2.66 Transcript Type= protein_coding
chr20	6006090	6040053	6006090	6040053	+	ENST00000378863.8@CRLS1	ENST00000378863.8	protein_coding	6006090,6009775,6015361,6031285,6032012,6034464,6037074	6006552,6009912,6015490,6031370,6032080,6034555,6040053	Gene ID= ENSG00000088766.11 TPM= 6.9 Transcript Type= protein_coding
chr20	6011574	6016282	6011574	6016282	-	transcript433.chr20.nnic@NA	transcript433.chr20.nnic	NA	6011574	6016282	Gene ID= novel_gene_chr20_434 TPM= 7.44 Transcript Type= NA
chr20	6767664	6780280	6767664	6780280	+	ENST00000378827.4@BMP2	ENST00000378827.4	protein_coding	6767664,6770120,6778245	6768875,6770472,6780280	Gene ID= ENSG00000125845.6 TPM= 4.25 Transcript Type= protein_coding
chr20	7253396	7258235	7253396	7258235	-	transcript441.chr20.nnic@AL080248.1	transcript441.chr20.nnic	lincRNA	7258098,7256975,7253396	7258235,7257094,7256850	Gene ID= ENSG00000238102.1 TPM= 2.12 Transcript Type= NA
chr20	7256580	7258214	7256580	7258214	-	ENST00000428954.1@AL080248.1	ENST00000428954.1	lincRNA	7258098,7256580	7258214,7256850	Gene ID= ENSG00000238102.1 TPM= 1.06 Transcript Type= lincRNA
chr20	7977348	8019829	7977348	8019829	-	ENST00000246024.6@TMX4	ENST00000246024.6	protein_coding	8019438,8010200,8001496,7999732,7996026,7987288,7983794,7977348	8019829,8010315,8001541,7999860,7996071,7987389,7983857,7982621	Gene ID= ENSG00000125827.8 TPM= 48.86 Transcript Type= protein_coding
chr20	8132370	8152647	8132370	8152647	+	transcript459.chr20.nic@PLCB1	transcript459.chr20.nic	protein_coding	8132370,8150294	8132750,8152647	Gene ID= ENSG00000182621.17 TPM= 2.12 Transcript Type= NA
chr20	8589612	8592178	8589612	8592178	-	transcript460.chr20.nnic@NA	transcript460.chr20.nnic	NA	8589612	8592178	Gene ID= novel_gene_chr20_461 TPM= 2.12 Transcript Type= NA
chr20	8628292	8788521	8628292	8788521	+	transcript462.chr20.nic@PLCB1	transcript462.chr20.nic	protein_coding	8628292,8646102,8647900,8649374,8657184,8658538,8684932,8697626,8708670,8716264,8717671,8722354,8724656,8727309,8729050,8733238,8737028,8739261,8740344,8741464,8757046,8760407,8765139,8774539,8788449	8628431,8646181,8647953,8649449,8657284,8658704,8685078,8697783,8708752,8716348,8717848,8722421,8724752,8727393,8729174,8733392,8737192,8739360,8740448,8741573,8757178,8760460,8765358,8774719,8788521	Gene ID= ENSG00000182621.17 TPM= 3.19 Transcript Type= NA
chr20	8132270	8653531	8132270	8653531	+	ENST00000629992.2@PLCB1	ENST00000629992.2	protein_coding	8132270,8150294,8371382,8628294,8646102,8647900,8649374,8651413	8132750,8150371,8371450,8628431,8646181,8647953,8649449,8653531	Gene ID= ENSG00000182621.17 TPM= 1.06 Transcript Type= protein_coding
chr20	9068719	9457433	9068719	9457433	+	transcript473.chr20.nic@PLCB4	transcript473.chr20.nic	protein_coding	9068719,9096287,9217390,9307800,9337126,9338008,9338894,9362896,9365461,9371214,9372303,9373047,9380054,9384201,9387463,9389879,9390531,9393588,9395523,9401490,9407917,9408633,9409057,9411037,9419807,9421297,9423748,9435560,9437002,9443981,9444178,9453347,9457414	9068903,9096342,9217452,9307898,9337206,9338067,9339037,9362975,9365514,9371295,9372403,9373104,9380162,9384411,9387556,9389958,9390615,9393678,9395618,9401590,9408058,9408717,9409181,9411088,9419909,9421461,9423952,9435648,9437152,9444030,9444243,9453462,9457433	Gene ID= ENSG00000101333.16 TPM= 3.19 Transcript Type= NA
chr20	9068512	9366248	9068512	9366248	+	transcript480.chr20.nic@PLCB4	transcript480.chr20.nic	protein_coding	9068512,9096287,9217390,9307800,9337126,9338008,9338894,9362896,9365461	9068903,9096342,9217452,9307898,9337206,9338067,9339037,9362975,9366248	Gene ID= ENSG00000101333.16 TPM= 2.12 Transcript Type= NA
chr20	9068686	9366248	9068686	9366248	+	transcript482.chr20.nic@PLCB4	transcript482.chr20.nic	protein_coding	9068686,9217390,9307800,9337126,9338008,9338894,9362896,9365461	9068903,9217452,9307898,9337206,9338067,9339037,9362975,9366248	Gene ID= ENSG00000101333.16 TPM= 2.12 Transcript Type= NA
chr20	9367948	9370926	9367948	9370926	+	transcript487.chr20.nnic@NA	transcript487.chr20.nnic	NA	9367948	9370926	Gene ID= novel_gene_chr20_488 TPM= 2.12 Transcript Type= NA
chr20	9514361	9530524	9514361	9530524	+	ENST00000246070.2@LAMP5	ENST00000246070.2	protein_coding	9514361,9515453,9516000,9516256,9518040,9529642	9514916,9515625,9516131,9516361,9518228,9530524	Gene ID= ENSG00000125869.9 TPM= 1.06 Transcript Type= protein_coding
chr20	10035054	10038972	10035054	10038972	+	transcript492.chr20.nic@ANKEF1	transcript492.chr20.nic	protein_coding	10035054,10038258	10035333,10038972	Gene ID= ENSG00000132623.15 TPM= 3.19 Transcript Type= NA
chr20	10218833	10307418	10218833	10307418	+	ENST00000304886.6@SNAP25	ENST00000304886.6	protein_coding	10218833,10275429,10277685,10284724,10292882,10296925,10299268,10306129	10218977,10275563,10277726,10284772,10292999,10297050,10299412,10307418	Gene ID= ENSG00000132639.12 TPM= 1.06 Transcript Type= protein_coding
chr20	10405184	10434195	10405184	10434195	-	transcript503.chr20.nnic@MKKS	transcript503.chr20.nnic	protein_coding	10434108,10420528,10408628,10407616,10405184	10434195,10420758,10408803,10407726,10405687	Gene ID= ENSG00000125863.18 TPM= 3.19 Transcript Type= NA
chr20	10401009	10434222	10401009	10434222	-	ENST00000347364.7@MKKS	ENST00000347364.7	protein_coding	10434108,10420528,10412530,10408628,10407616,10401009	10434222,10420758,10413931,10408803,10407726,10405687	Gene ID= ENSG00000125863.18 TPM= 2.12 Transcript Type= protein_coding
chr20	13008979	13051018	13008979	13051018	+	ENST00000476791.1@SPTLC3	ENST00000476791.1	protein_coding	13008979,13048945	13009384,13051018	Gene ID= ENSG00000172296.12 TPM= 1.06 Transcript Type= processed_transcript
chr20	13389392	13638940	13389392	13638940	-	ENST00000337743.8@TASP1	ENST00000337743.8	protein_coding	13638894,13629934,13625185,13623446,13587250,13580897,13569507,13559008,13534022,13528433,13483227,13435044,13417448,13389392	13638940,13630152,13625252,13623514,13587370,13580981,13569586,13559114,13534141,13528511,13483337,13435154,13417521,13390452	Gene ID= ENSG00000089123.15 TPM= 6.37 Transcript Type= protein_coding
chr20	13759744	13784927	13759744	13784927	-	transcript532.chr20.nnic@ESF1	transcript532.chr20.nnic	protein_coding	13784880,13782504,13775873,13775157,13772515,13771331,13769907,13766777,13759744	13784927,13783183,13776270,13775270,13772615,13771483,13770021,13766924,13759853	Gene ID= ENSG00000089048.14 TPM= 9.56 Transcript Type= NA
chr20	13785066	13817228	13785066	13817228	+	transcript520.chr20.nic@NDUFAF5	transcript520.chr20.nic	protein_coding	13785066,13787312,13788589,13793160,13794838,13798461,13801486,13808842,13814418,13816463,13816875,13817118	13785290,13787352,13788652,13793227,13794941,13798500,13801683,13808902,13814515,13816546,13816957,13817228	Gene ID= ENSG00000101247.17 TPM= 3.72 Transcript Type= NA
chr20	13785050	13817228	13785050	13817228	+	ENST00000463598.1@NDUFAF5	ENST00000463598.1	protein_coding	13785050,13787312,13788589,13793160,13798461,13801486,13808842,13816463,13816875,13817118	13785290,13787352,13788652,13793227,13798500,13801683,13808902,13816546,13816957,13817228	Gene ID= ENSG00000101247.17 TPM= 1.59 Transcript Type= protein_coding
chr20	16272104	16573457	16272104	16573457	-	transcript538.chr20.nic@KIF16B	transcript538.chr20.nic	protein_coding	16573229,16528371,16526092,16515548,16512826,16511418,16507958,16506022,16505722,16504372,16497613,16494291,16429863,16428953,16427104,16406374,16404813,16382098,16381694,16378805,16374257,16371665,16370586,16356330,16335926,16312335,16272104	16573457,16528440,16526205,16515664,16512923,16511527,16508100,16506190,16505853,16504547,16497678,16494350,16429982,16429004,16427241,16406456,16404901,16382130,16381747,16380163,16374409,16371761,16370636,16356452,16336015,16312418,16273411	Gene ID= ENSG00000089177.18 TPM= 3.19 Transcript Type= NA
chr20	16379162	16573457	16379162	16573457	-	transcript543.chr20.nic@KIF16B	transcript543.chr20.nic	protein_coding	16573229,16528371,16526092,16515548,16512826,16511418,16507958,16506022,16505722,16504372,16497613,16494291,16429863,16428953,16427104,16406374,16404813,16381694,16379162	16573457,16528440,16526205,16515664,16512923,16511527,16508100,16506190,16505853,16504547,16497678,16494350,16429982,16429004,16427241,16406456,16404901,16381747,16380163	Gene ID= ENSG00000089177.18 TPM= 3.19 Transcript Type= NA
chr20	16729961	16741776	16729961	16741776	+	ENST00000377943.9@SNRPB2	ENST00000377943.9	protein_coding	16729961,16731668,16732164,16737261,16738852,16740325,16740846	16730064,16731766,16732336,16737401,16738902,16740413,16741776	Gene ID= ENSG00000125870.10 TPM= 5.31 Transcript Type= protein_coding
chr20	16729984	16742563	16729984	16742563	+	ENST00000246071.7@SNRPB2	ENST00000246071.7	protein_coding	16729984,16731668,16732164,16737261,16738852,16740325,16740846	16730164,16731766,16732336,16737401,16738902,16740413,16742563	Gene ID= ENSG00000125870.10 TPM= 12.75 Transcript Type= protein_coding
chr20	17570044	17600812	17570044	17600812	+	transcript576.chr20.nic@DSTN	transcript576.chr20.nic	protein_coding	17570044,17600738	17570211,17600812	Gene ID= ENSG00000125868.15 TPM= 33.99 Transcript Type= NA
chr20	17570082	17608242	17570082	17608242	+	ENST00000474024.5@DSTN	ENST00000474024.5	protein_coding	17570082,17591932,17600738,17604555,17607037	17570211,17592063,17601045,17604631,17608242	Gene ID= ENSG00000125868.15 TPM= 44.61 Transcript Type= protein_coding
chr20	17613678	17682265	17613678	17682265	-	transcript584.chr20.nic@RRBP1	transcript584.chr20.nic	protein_coding	17682028,17658596,17642979,17641797,17636577,17635546,17633460,17629823,17627504,17627348,17625512,17624576,17621855,17621690,17621458,17620715,17620299,17619633,17618596,17616732,17615926,17615431,17614737,17613678	17682265,17660528,17643127,17641919,17636729,17635664,17633613,17629961,17627682,17627382,17625602,17624668,17621947,17621773,17621547,17620807,17620370,17619728,17618679,17616839,17616009,17615529,17614880,17614220	Gene ID= ENSG00000125844.15 TPM= 13.28 Transcript Type= NA
chr20	17660284	17682306	17660284	17682306	-	transcript591.chr20.nic@RRBP1	transcript591.chr20.nic	protein_coding	17682028,17679999,17660284	17682306,17680075,17660528	Gene ID= ENSG00000125844.15 TPM= 2.12 Transcript Type= NA
chr20	17659606	17682295	17659606	17682295	-	ENST00000398782.2@RRBP1	ENST00000398782.2	protein_coding	17682028,17659606	17682295,17660528	Gene ID= ENSG00000125844.15 TPM= 1.06 Transcript Type= protein_coding
chr20	17613678	17682233	17613678	17682233	-	ENST00000377813.5@RRBP1	ENST00000377813.5	protein_coding	17682028,17679999,17658596,17642979,17641797,17636577,17635546,17633460,17629823,17627504,17627348,17625512,17624576,17621855,17621690,17621458,17620715,17620299,17619633,17618596,17616732,17615926,17615431,17614737,17613678	17682233,17680075,17660528,17643127,17641919,17636729,17635664,17633613,17629961,17627682,17627382,17625602,17624668,17621947,17621773,17621547,17620807,17620370,17619728,17618679,17616839,17616009,17615529,17614880,17614220	Gene ID= ENSG00000125844.15 TPM= 11.15 Transcript Type= protein_coding
chr20	17622308	17623942	17622308	17623942	+	transcript593.chr20.nnic@NA	transcript593.chr20.nnic	NA	17622308	17623942	Gene ID= novel_gene_chr20_594 TPM= 2.12 Transcript Type= NA
chr20	17941597	17968980	17941597	17968980	-	ENST00000377768.7@SNX5	ENST00000377768.7	protein_coding	17968700,17968375,17956933,17955365,17953996,17952587,17951500,17950291,17950132,17949064,17948890,17947486,17943110,17941597	17968980,17968457,17957037,17955475,17954117,17952710,17951595,17950396,17950207,17949103,17948976,17947645,17943195,17942407	Gene ID= ENSG00000089006.16 TPM= 6.55 Transcript Type= protein_coding
chr20	17941597	17968720	17941597	17968720	-	ENST00000377759.8@SNX5	ENST00000377759.8	protein_coding	17968375,17956933,17955365,17953996,17952587,17951500,17950291,17950132,17949064,17948890,17947486,17943110,17941597	17968720,17957037,17955475,17954117,17952710,17951595,17950396,17950207,17949103,17948976,17947645,17943195,17942407	Gene ID= ENSG00000089006.16 TPM= 62.85 Transcript Type= protein_coding
chr20	17941600	17968515	17941600	17968515	-	transcript600.chr20.nic@SNX5	transcript600.chr20.nic	protein_coding	17968375,17956933,17953996,17952587,17951500,17950291,17950132,17949064,17948890,17947486,17943110,17941600	17968515,17957037,17954117,17952710,17951595,17950396,17950207,17949103,17948976,17947645,17943195,17942407	Gene ID= ENSG00000089006.16 TPM= 4.96 Transcript Type= NA
chr20	17947148	17968617	17947148	17968617	-	transcript605.chr20.nic@SNX5	transcript605.chr20.nic	protein_coding	17968375,17956933,17955365,17953996,17952587,17951500,17950291,17950132,17949064,17948890,17947148	17968617,17957037,17955475,17954117,17952710,17951595,17950396,17950207,17949103,17948976,17947645	Gene ID= ENSG00000089006.16 TPM= 6.37 Transcript Type= NA
chr20	17968889	17990684	17968889	17990684	+	transcript608.chr20.nnic@MGME1	transcript608.chr20.nnic	protein_coding	17968889,17969801,17972707,17975684,17988166,17989939	17969141,17970370,17972751,17975903,17988298,17990684	Gene ID= ENSG00000125871.13 TPM= 2.12 Transcript Type= NA
chr20	17969283	17991122	17969283	17991122	+	transcript612.chr20.nnic@MGME1	transcript612.chr20.nnic	protein_coding	17969283,17972707,17975684,17988166,17989939	17970370,17972751,17975903,17988298,17991122	Gene ID= ENSG00000125871.13 TPM= 4.25 Transcript Type= NA
chr20	17968924	17991122	17968924	17991122	+	transcript614.chr20.nic@MGME1	transcript614.chr20.nic	protein_coding	17968924,17975684,17988166,17989939	17970370,17975903,17988298,17991122	Gene ID= ENSG00000125871.13 TPM= 6.37 Transcript Type= NA
chr20	18137849	18188033	18137849	18188033	+	transcript616.chr20.nic@KAT14	transcript616.chr20.nic	protein_coding	18137849,18142208,18145233,18150821,18159084,18161820,18162377,18181710,18183123,18184602,18187286	18138051,18142919,18145351,18150942,18159265,18162239,18162945,18181846,18183298,18184792,18188033	Gene ID= ENSG00000149474.13 TPM= 8.32 Transcript Type= NA
chr20	18137873	18143169	18137873	18143169	+	ENST00000432901.3@PET117	ENST00000432901.3	protein_coding	18137873,18142208	18138051,18143169	Gene ID= ENSG00000232838.3 TPM= 20.18 Transcript Type= protein_coding
chr20	18164619	18166830	18164619	18166830	-	transcript625.chr20.nnic@NA	transcript625.chr20.nnic	NA	18164619	18166830	Gene ID= novel_gene_chr20_626 TPM= 3.19 Transcript Type= NA
chr20	18288517	18316994	18288517	18316994	+	transcript627.chr20.nnic@ZNF133	transcript627.chr20.nnic	protein_coding	18288517,18305681,18306298,18315069	18288604,18305807,18306393,18316994	Gene ID= ENSG00000125846.15 TPM= 10.09 Transcript Type= NA
chr20	18288283	18316994	18288283	18316994	+	ENST00000538547.4@ZNF133	ENST00000538547.4	protein_coding	18288283,18315072	18288604,18316994	Gene ID= ENSG00000125846.15 TPM= 6.9 Transcript Type= protein_coding
chr20	18467127	18484643	18467127	18484643	+	ENST00000377603.4@POLR3F	ENST00000377603.4	protein_coding	18467127,18468944,18472842,18473391,18475075,18480038,18480402,18481619,18483481	18467568,18469061,18472909,18473458,18475187,18480181,18480509,18481810,18484643	Gene ID= ENSG00000132664.11 TPM= 7.44 Transcript Type= protein_coding
chr20	18486540	18497243	18486540	18497243	-	ENST00000337227.8@RBBP9	ENST00000337227.8	protein_coding	18497069,18495838,18493958,18490395,18486540	18497243,18495880,18494063,18490480,18489990	Gene ID= ENSG00000089050.15 TPM= 5.31 Transcript Type= protein_coding
chr20	18507555	18561415	18507555	18561415	+	ENST00000336714.7@SEC23B	ENST00000336714.7	protein_coding	18507555,18510822,18512225,18515650,18524433,18524935,18525788,18526373,18527496,18530680,18532664,18535653,18542296,18543019,18545956,18548609,18551089,18554235,18555108,18560651	18507972,18511056,18512282,18515736,18524669,18525020,18525932,18526531,18527611,18530803,18532744,18535742,18542402,18543172,18546033,18548770,18551175,18554390,18555173,18561415	Gene ID= ENSG00000101310.14 TPM= 5.31 Transcript Type= protein_coding
chr20	18567438	18569560	18567438	18569560	+	transcript644.chr20.nnic@SMIM26	transcript644.chr20.nnic	protein_coding	18567438,18568636,18569239	18567596,18568709,18569560	Gene ID= ENSG00000232388.4 TPM= 2.12 Transcript Type= NA
chr20	18567347	18569563	18567347	18569563	+	ENST00000435844.3@SMIM26	ENST00000435844.3	protein_coding	18567347,18569239	18567596,18569563	Gene ID= ENSG00000232388.4 TPM= 111.53 Transcript Type= protein_coding
chr20	18567420	18569563	18567420	18569563	+	ENST00000411646.1@SMIM26	ENST00000411646.1	protein_coding	18567420,18569236	18567596,18569563	Gene ID= ENSG00000232388.4 TPM= 19.12 Transcript Type= protein_coding
chr20	18587893	18763917	18587893	18763917	+	ENST00000377452.3@DTD1	ENST00000377452.3	protein_coding	18587893,18593731,18596006,18628127,18744100,18763360	18588115,18593821,18596241,18628233,18744271,18763917	Gene ID= ENSG00000125821.11 TPM= 21.24 Transcript Type= protein_coding
chr20	18794529	18796067	18794529	18796067	+	ENST00000609087.1@AL035563.1	ENST00000609087.1	lincRNA	18794529	18796067	Gene ID= ENSG00000273148.1 TPM= 1.06 Transcript Type= lincRNA
chr20	19050617	19050742	19050617	19050742	+	transcript650.chr20.nnic@NA	transcript650.chr20.nnic	NA	19050617	19050742	Gene ID= novel_gene_chr20_651 TPM= 3.19 Transcript Type= NA
chr20	19826977	19828317	19826977	19828317	-	transcript671.chr20.nnic@NA	transcript671.chr20.nnic	NA	19826977	19828317	Gene ID= novel_gene_chr20_672 TPM= 3.19 Transcript Type= NA
chr20	19886521	20002457	19886521	20002457	+	ENST00000255006.10@RIN2	ENST00000255006.10	protein_coding	19886521,19889566,19935099,19956615,19960700,19964952,19970838,19974654,19990006,19992168,19996679,20000613	19886780,19889658,19935199,19956807,19960811,19965024,19970929,19975787,19990311,19992299,19996842,20002457	Gene ID= ENSG00000132669.12 TPM= 42.49 Transcript Type= protein_coding
chr20	19971737	19974684	19971737	19974684	-	transcript673.chr20.nnic@NA	transcript673.chr20.nnic	NA	19971737	19974684	Gene ID= novel_gene_chr20_674 TPM= 11.68 Transcript Type= NA
chr20	20017116	20033629	20017116	20033629	+	ENST00000334982.8@NAA20	ENST00000334982.8	protein_coding	20017116,20022456,20025677,20026784,20032508,20033102	20017449,20022480,20025767,20026919,20032653,20033629	Gene ID= ENSG00000173418.11 TPM= 138.61 Transcript Type= protein_coding
chr20	20017348	20033629	20017348	20033629	+	ENST00000463154.5@NAA20	ENST00000463154.5	protein_coding	20017348,20022456,20025669,20026784,20032508,20033102	20017449,20022480,20025767,20026919,20032653,20033629	Gene ID= ENSG00000173418.11 TPM= 3.72 Transcript Type= processed_transcript
chr20	20085315	20360698	20085315	20360698	+	transcript689.chr20.nnic@CFAP61	transcript689.chr20.nnic	protein_coding	20085315,20090844,20098655,20142857,20159370,20166397,20169321,20187930,20196570,20199768,20228249,20246117,20251595,20262956,20277166,20288609,20290300,20298181,20341831,20360210	20085536,20090976,20098814,20142948,20159444,20166436,20169460,20188056,20196776,20199902,20228376,20246215,20251763,20263130,20277458,20288936,20290391,20298386,20341921,20360698	Gene ID= ENSG00000089101.17 TPM= 18.06 Transcript Type= NA
chr20	20389562	20394910	20389562	20394910	-	transcript700.chr20.nnic@RALGAPA2	transcript700.chr20.nnic	protein_coding	20393511,20389562	20394910,20393253	Gene ID= ENSG00000188559.13 TPM= 8.5 Transcript Type= NA
chr20	21126056	21246618	21126056	21246618	+	transcript704.chr20.nic@KIZ	transcript704.chr20.nic	protein_coding	21126056,21132097,21136390,21145565,21161871,21162850,21205491,21214535,21215583,21229011,21232734,21244245,21246479	21126204,21132159,21136552,21145654,21162507,21163159,21205530,21214700,21215648,21229115,21232830,21244288,21246618	Gene ID= ENSG00000088970.15 TPM= 3.72 Transcript Type= NA
chr20	21126054	21246622	21126054	21246622	+	ENST00000619189.4@KIZ	ENST00000619189.4	protein_coding	21126054,21132097,21136390,21145565,21161871,21162850,21205491,21214535,21215583,21229011,21232734,21244245,21246479	21126204,21132159,21136552,21145654,21162507,21163159,21205584,21214700,21215648,21229115,21232830,21244288,21246622	Gene ID= ENSG00000088970.15 TPM= 12.03 Transcript Type= protein_coding
chr20	21126007	21246622	21126007	21246622	+	ENST00000620891.4@KIZ	ENST00000620891.4	protein_coding	21126007,21132097,21145565,21161871,21162850,21205491,21214535,21215583,21229011,21232734,21244245,21246479	21126204,21132159,21145654,21162507,21163159,21205584,21214700,21215648,21229115,21232830,21244288,21246622	Gene ID= ENSG00000088970.15 TPM= 1.41 Transcript Type= protein_coding
chr20	21126052	21246618	21126052	21246618	+	ENST00000616848.4@KIZ	ENST00000616848.4	protein_coding	21126052,21132097,21161871,21162850,21205491,21214535,21215583,21229011,21232734,21244245,21246479	21126204,21132159,21162507,21163159,21205584,21214700,21215648,21229115,21232830,21244288,21246618	Gene ID= ENSG00000088970.15 TPM= 1.94 Transcript Type= protein_coding
chr20	21139078	21142040	21139078	21142040	-	transcript713.chr20.nnic@NA	transcript713.chr20.nnic	NA	21139078	21142040	Gene ID= novel_gene_chr20_714 TPM= 2.12 Transcript Type= NA
chr20	21302731	21303704	21302731	21303704	-	ENST00000622628.1@AL117332.1	ENST00000622628.1	antisense_RNA	21302731	21303704	Gene ID= ENSG00000275457.1 TPM= 1.06 Transcript Type= antisense_RNA
chr20	21303292	21339074	21303292	21339074	+	transcript725.chr20.nic@XRN2	transcript725.chr20.nic	protein_coding	21303292,21326279,21326490,21328559,21330481,21330616,21331561,21331768,21332283,21333544,21333704,21333937,21334078,21339044	21303473,21326406,21326601,21328670,21330539,21330705,21331633,21331818,21332440,21333618,21333837,21333994,21334185,21339074	Gene ID= ENSG00000088930.7 TPM= 19.12 Transcript Type= NA
chr20	21303304	21389827	21303304	21389827	+	ENST00000377191.4@XRN2	ENST00000377191.4	protein_coding	21303304,21326279,21326490,21328559,21330481,21330616,21331561,21331768,21332283,21333544,21333704,21333937,21334078,21339044,21340721,21344090,21346415,21348146,21348341,21349389,21354789,21356080,21356586,21357736,21365421,21365573,21368463,21381994,21386868,21389273	21303473,21326406,21326601,21328670,21330539,21330705,21331633,21331818,21332440,21333618,21333837,21333994,21334185,21339088,21340852,21344208,21346550,21348253,21348430,21349461,21354872,21356177,21356665,21357792,21365489,21365704,21368590,21382057,21387006,21389827	Gene ID= ENSG00000088930.7 TPM= 47.8 Transcript Type= protein_coding
chr20	23045633	23049741	23045633	23049741	-	ENST00000377103.2@THBD	ENST00000377103.2	protein_coding	23045633	23049741	Gene ID= ENSG00000178726.6 TPM= 8.5 Transcript Type= protein_coding
chr20	23350736	23354777	23350736	23354777	+	ENST00000254998.2@NXT1	ENST00000254998.2	protein_coding	23350736,23353981	23351061,23354777	Gene ID= ENSG00000132661.3 TPM= 30.8 Transcript Type= protein_coding
chr20	23362182	23373063	23362182	23373063	+	ENST00000338121.9@GZF1	ENST00000338121.9	protein_coding	23362182,23364363,23367003,23368762,23369584,23370091	23362237,23365747,23367097,23368929,23369741,23373063	Gene ID= ENSG00000125812.15 TPM= 6.37 Transcript Type= protein_coding
chr20	23362182	23372135	23362182	23372135	+	transcript757.chr20.nnic@GZF1	transcript757.chr20.nnic	protein_coding	23362182,23368762,23369584,23370137	23362237,23368929,23369741,23372135	Gene ID= ENSG00000125812.15 TPM= 4.25 Transcript Type= NA
chr20	23374519	23421519	23374519	23421519	-	ENST00000398425.7@NAPB	ENST00000398425.7	protein_coding	23421305,23402993,23397072,23394922,23390209,23389946,23381213,23379867,23379445,23374519	23421519,23403072,23397188,23394999,23390264,23390030,23381317,23379935,23379495,23377486	Gene ID= ENSG00000125814.17 TPM= 5.31 Transcript Type= protein_coding
chr20	23374522	23421488	23374522	23421488	-	ENST00000377026.4@NAPB	ENST00000377026.4	protein_coding	23421305,23402993,23397072,23395139,23394922,23390209,23389946,23381213,23379867,23379445,23374522	23421488,23403072,23397188,23395185,23394999,23390264,23390030,23381317,23379935,23379495,23377486	Gene ID= ENSG00000125814.17 TPM= 4.25 Transcript Type= protein_coding
chr20	23633648	23638026	23633648	23638026	-	ENST00000376925.7@CST3	ENST00000376925.7	protein_coding	23637620,23635254,23633648	23638026,23635367,23633999	Gene ID= ENSG00000101439.8 TPM= 674.21 Transcript Type= protein_coding
chr20	24469866	24666532	24469866	24666532	+	transcript778.chr20.nnic@SYNDIG1	transcript778.chr20.nnic	protein_coding	24469866,24487763,24543020,24584856,24665346	24469925,24488651,24543577,24584993,24666532	Gene ID= ENSG00000101463.5 TPM= 2.12 Transcript Type= NA
chr20	24469199	24666616	24469199	24666616	+	ENST00000376862.3@SYNDIG1	ENST00000376862.3	protein_coding	24469199,24543020,24584856,24665346	24469753,24543577,24584993,24666616	Gene ID= ENSG00000101463.5 TPM= 39.3 Transcript Type= protein_coding
chr20	24469659	24666616	24469659	24666616	+	transcript787.chr20.nnic@SYNDIG1	transcript787.chr20.nnic	protein_coding	24469659,24543020,24584856,24665346	24469925,24543577,24584993,24666616	Gene ID= ENSG00000101463.5 TPM= 7.44 Transcript Type= NA
chr20	24632953	24635429	24632953	24635429	-	transcript792.chr20.nnic@NA	transcript792.chr20.nnic	NA	24632953	24635429	Gene ID= novel_gene_chr20_793 TPM= 4.25 Transcript Type= NA
chr20	24962925	24992979	24962925	24992979	-	ENST00000217456.2@APMAP	ENST00000217456.2	protein_coding	24992594,24983903,24978767,24973645,24971460,24970197,24969526,24968892,24962925	24992979,24984019,24978882,24973737,24971576,24970371,24969660,24969084,24964022	Gene ID= ENSG00000101474.11 TPM= 74.35 Transcript Type= protein_coding
chr20	24962947	24992782	24962947	24992782	-	transcript798.chr20.nnic@APMAP	transcript798.chr20.nnic	protein_coding	24992594,24983903,24978767,24973645,24971460,24970197,24969526,24962947	24992782,24984019,24978882,24973737,24971576,24970371,24969660,24964022	Gene ID= ENSG00000101474.11 TPM= 18.06 Transcript Type= NA
chr20	25045921	25058228	25045921	25058228	-	transcript811.chr20.nic@ACSS1	transcript811.chr20.nic	protein_coding	25057769,25045921	25058228,25048181	Gene ID= ENSG00000154930.14 TPM= 6.37 Transcript Type= NA
chr20	25006232	25058182	25006232	25058182	-	ENST00000323482.8@ACSS1	ENST00000323482.8	protein_coding	25057769,25048085,25030759,25023466,25022940,25021389,25020010,25015138,25013961,25013536,25012812,25012601,25009270,25006232	25058182,25048181,25030958,25023641,25023092,25021536,25020147,25015230,25014073,25013662,25012939,25012664,25009388,25007941	Gene ID= ENSG00000154930.14 TPM= 121.09 Transcript Type= protein_coding
chr20	25006232	25012326	25006232	25012326	-	ENST00000484396.1@ACSS1	ENST00000484396.1	protein_coding	25009270,25006232	25012326,25007941	Gene ID= ENSG00000154930.14 TPM= 18.06 Transcript Type= processed_transcript
chr20	25195696	25226729	25195696	25226729	+	transcript826.chr20.nic@ENTPD6	transcript826.chr20.nic	protein_coding	25195696,25206522,25207076,25209849,25213263,25214867,25215676,25216648,25217502,25218550,25221232,25222838,25224101,25225162,25225499	25195867,25206590,25207397,25209925,25213406,25214942,25215711,25216736,25217581,25218614,25221333,25222978,25224157,25225317,25226729	Gene ID= ENSG00000197586.12 TPM= 11.03 Transcript Type= NA
chr20	25195693	25226729	25195693	25226729	+	transcript837.chr20.nic@ENTPD6	transcript837.chr20.nic	protein_coding	25195693,25207076,25209849,25213263,25214867,25215676,25216648,25217502,25218550,25221232,25222838,25224101,25225162,25225499	25195867,25207397,25209925,25213406,25214942,25215711,25216736,25217581,25218614,25221333,25222978,25224157,25225317,25226729	Gene ID= ENSG00000197586.12 TPM= 14.21 Transcript Type= NA
chr20	25195693	25226729	25195693	25226729	+	ENST00000354989.9@ENTPD6	ENST00000354989.9	protein_coding	25195693,25207076,25209849,25213263,25214867,25215676,25216648,25217502,25218550,25221232,25222838,25224101,25225205,25225499	25195867,25207397,25209925,25213406,25214942,25215711,25216736,25217581,25218614,25221333,25222978,25224157,25225317,25226729	Gene ID= ENSG00000197586.12 TPM= 40.13 Transcript Type= protein_coding
chr20	25195693	25226729	25195693	25226729	+	transcript850.chr20.nic@ENTPD6	transcript850.chr20.nic	protein_coding	25195693,25207076,25209849,25213263,25214867,25215676,25216648,25217502,25218550,25221232,25224101,25225205,25225499	25195867,25207397,25209925,25213406,25214942,25215711,25216736,25217581,25218614,25222978,25224157,25225317,25226729	Gene ID= ENSG00000197586.12 TPM= 10.02 Transcript Type= NA
chr20	25195693	25226729	25195693	25226729	+	transcript854.chr20.nic@ENTPD6	transcript854.chr20.nic	protein_coding	25195693,25209849,25213263,25214867,25215676,25216648,25217502,25218550,25221232,25222838,25224101,25225205,25225499	25195867,25209925,25213406,25214942,25215711,25216736,25217581,25218614,25221333,25222978,25224157,25225317,25226729	Gene ID= ENSG00000197586.12 TPM= 24.73 Transcript Type= NA
chr20	25195693	25226729	25195693	25226729	+	transcript860.chr20.nic@ENTPD6	transcript860.chr20.nic	protein_coding	25195693,25209849,25213263,25214867,25215676,25216648,25217502,25218550,25221232,25224101,25225205,25225499	25195867,25209925,25213406,25214942,25215711,25216736,25217581,25218614,25222978,25224157,25225317,25226729	Gene ID= ENSG00000197586.12 TPM= 9.49 Transcript Type= NA
chr20	25195701	25226729	25195701	25226729	+	ENST00000360031.6@ENTPD6	ENST00000360031.6	protein_coding	25195701,25206522,25207079,25209849,25213263,25214867,25215676,25216648,25217502,25218550,25221232,25222838,25224101,25225205,25225499	25195867,25206590,25207397,25209925,25213406,25214942,25215711,25216736,25217581,25218614,25221333,25222978,25224157,25225317,25226729	Gene ID= ENSG00000197586.12 TPM= 18.89 Transcript Type= protein_coding
chr20	25195720	25226729	25195720	25226729	+	ENST00000376652.8@ENTPD6	ENST00000376652.8	protein_coding	25195720,25206522,25207076,25209849,25213263,25214867,25215676,25216648,25217502,25218550,25221232,25222838,25224101,25225205,25225499	25195867,25206590,25207397,25209925,25213406,25214942,25215711,25216736,25217581,25218614,25221333,25222978,25224157,25225317,25226729	Gene ID= ENSG00000197586.12 TPM= 22.07 Transcript Type= protein_coding
chr20	25248069	25298014	25248069	25298014	+	ENST00000216962.8@PYGB	ENST00000216962.8	protein_coding	25248069,25259237,25269129,25271383,25274592,25276646,25277244,25278319,25279057,25280266,25280949,25282033,25283176,25284104,25288425,25290481,25292406,25294158,25295604,25296370	25248421,25259338,25269207,25271486,25274723,25276757,25277326,25278462,25279149,25280412,25281112,25282147,25283277,25284251,25288483,25290622,25292613,25294292,25295670,25298014	Gene ID= ENSG00000100994.11 TPM= 952.76 Transcript Type= protein_coding
chr20	25248085	25253629	25248085	25253629	+	transcript929.chr20.nnic@NA	transcript929.chr20.nnic	NA	25248085	25253629	Gene ID= novel_gene_chr20_930 TPM= 7.44 Transcript Type= NA
chr20	25286053	25289485	25286053	25289485	+	transcript927.chr20.nnic@NA	transcript927.chr20.nnic	NA	25286053	25289485	Gene ID= novel_gene_chr20_928 TPM= 10.62 Transcript Type= NA
chr20	25300198	25390835	25300198	25390835	-	transcript903.chr20.nic@ABHD12	transcript903.chr20.nic	protein_coding	25390513,25339227,25338885,25323325,25320199,25317048,25314925,25309446,25308457,25307966,25306833,25303550,25302219,25300198	25390835,25339351,25339004,25323430,25320318,25317078,25314970,25309575,25308494,25308045,25306915,25303628,25302346,25300884	Gene ID= ENSG00000100997.18 TPM= 11.65 Transcript Type= NA
chr20	25294743	25390983	25294743	25390983	-	ENST00000376542.7@ABHD12	ENST00000376542.7	protein_coding	25390513,25339227,25323325,25320199,25317048,25314925,25309446,25308457,25307966,25306833,25303550,25302219,25294743	25390983,25339351,25323430,25320318,25317078,25314970,25309575,25308494,25308045,25306915,25303628,25302346,25295030	Gene ID= ENSG00000100997.18 TPM= 19.12 Transcript Type= protein_coding
chr20	25300198	25390976	25300198	25390976	-	ENST00000339157.9@ABHD12	ENST00000339157.9	protein_coding	25390513,25339227,25323325,25320199,25317048,25314925,25309446,25308457,25307966,25306833,25303550,25302219,25300198	25390976,25339351,25323430,25320318,25317078,25314970,25309575,25308494,25308045,25306915,25303628,25302346,25300884	Gene ID= ENSG00000100997.18 TPM= 173.1 Transcript Type= protein_coding
chr20	25300214	25390922	25300214	25390922	-	transcript915.chr20.nnic@ABHD12	transcript915.chr20.nnic	protein_coding	25390513,25339227,25323325,25320199,25317048,25314925,25309446,25308457,25307966,25306833,25303550,25300214	25390922,25339351,25323430,25320318,25317078,25314970,25309575,25308494,25308045,25306915,25303628,25300884	Gene ID= ENSG00000100997.18 TPM= 27.4 Transcript Type= NA
chr20	25612935	25624175	25612935	25624175	-	ENST00000304788.3@NANP	ENST00000304788.3	protein_coding	25623859,25612935	25624175,25616581	Gene ID= ENSG00000170191.4 TPM= 1.06 Transcript Type= protein_coding
chr20	25674215	25696881	25674215	25696881	-	transcript942.chr20.nnic@ZNF337	transcript942.chr20.nnic	protein_coding	25696759,25686391,25685996,25674215	25696881,25686466,25686122,25677037	Gene ID= ENSG00000130684.13 TPM= 7.97 Transcript Type= NA
chr20	25674215	25688416	25674215	25688416	-	transcript943.chr20.nnic@ZNF337	transcript943.chr20.nnic	protein_coding	25686391,25685996,25674215	25688416,25686122,25677037	Gene ID= ENSG00000130684.13 TPM= 2.12 Transcript Type= NA
chr20	25674215	25696841	25674215	25696841	-	ENST00000252979.5@ZNF337	ENST00000252979.5	protein_coding	25696759,25686391,25685996,25685567,25674215	25696841,25686466,25686122,25685662,25677037	Gene ID= ENSG00000130684.13 TPM= 12.21 Transcript Type= protein_coding
chr20	25747944	25748141	25747944	25748141	+	transcript947.chr20.nnic@NA	transcript947.chr20.nnic	NA	25747944	25748141	Gene ID= novel_gene_chr20_948 TPM= 3.19 Transcript Type= NA
chr20	25844666	25846690	25844666	25846690	-	transcript949.chr20.nnic@NA	transcript949.chr20.nnic	NA	25844666	25846690	Gene ID= novel_gene_chr20_950 TPM= 4.25 Transcript Type= NA
chr20	25851798	25854046	25851798	25854046	-	transcript951.chr20.nnic@NA	transcript951.chr20.nnic	NA	25851798	25854046	Gene ID= novel_gene_chr20_952 TPM= 2.12 Transcript Type= NA
chr20	26009783	26011242	26009783	26011242	+	transcript956.chr20.nnic@NA	transcript956.chr20.nnic	NA	26009783	26011242	Gene ID= novel_gene_chr20_957 TPM= 4.25 Transcript Type= NA
chr20	29457122	29497263	29457122	29497263	-	transcript976.chr20.nnic@FRG1EP	transcript976.chr20.nnic	unprocessed_pseudogene	29496813,29494886,29490847,29485740,29482454,29481360,29457122	29497263,29494955,29490972,29485841,29482545,29481468,29459761	Gene ID= ENSG00000282995.1 TPM= 4.25 Transcript Type= NA
chr20	29477578	29497374	29477578	29497374	-	transcript980.chr20.nnic@FRG1EP	transcript980.chr20.nnic	unprocessed_pseudogene	29496813,29494886,29490847,29485740,29482454,29481358,29477578	29497374,29494955,29490972,29485841,29482545,29481468,29478690	Gene ID= ENSG00000282995.1 TPM= 2.12 Transcript Type= NA
chr20	29480072	29497374	29480072	29497374	-	transcript983.chr20.nnic@FRG1EP	transcript983.chr20.nnic	unprocessed_pseudogene	29496813,29494886,29490847,29485740,29482454,29480072	29497374,29494955,29490972,29485841,29482545,29481468	Gene ID= ENSG00000282995.1 TPM= 4.25 Transcript Type= NA
chr20	29480072	29497288	29480072	29497288	-	transcript984.chr20.nnic@FRG1EP	transcript984.chr20.nnic	unprocessed_pseudogene	29497118,29494886,29490847,29485740,29482454,29480072	29497288,29494955,29490972,29485841,29482545,29481468	Gene ID= ENSG00000282995.1 TPM= 2.12 Transcript Type= NA
chr20	30377219	30399323	30377219	30399323	+	transcript992.chr20.nnic@FRG1BP	transcript992.chr20.nnic	unprocessed_pseudogene	30377219,30379585,30388453,30393551,30396862,30397935,30399222	30377425,30379651,30388578,30393655,30396953,30398045,30399323	Gene ID= ENSG00000149531.15 TPM= 3.19 Transcript Type= NA
chr20	30404925	30406500	30404925	30406500	+	transcript994.chr20.nnic@NA	transcript994.chr20.nnic	NA	30404925	30406500	Gene ID= novel_gene_chr20_995 TPM= 3.19 Transcript Type= NA
chr20	31475293	31484905	31475293	31484905	+	ENST00000201979.2@REM1	ENST00000201979.2	protein_coding	31475293,31476227,31477828,31482287,31484159	31475366,31476785,31477910,31482488,31484905	Gene ID= ENSG00000088320.3 TPM= 4.25 Transcript Type= protein_coding
chr20	31514422	31569567	31514422	31569567	+	transcript1002.chr20.nic@HM13	transcript1002.chr20.nic	protein_coding	31514422,31527484,31538179,31544947,31549029,31549207,31550064,31559611,31561634,31566210,31568078,31569120	31514734,31527582,31538261,31545035,31549114,31549332,31550121,31559647,31561736,31566295,31568280,31569567	Gene ID= ENSG00000101294.16 TPM= 3.72 Transcript Type= NA
chr20	31514422	31569567	31514422	31569567	+	transcript1005.chr20.nic@HM13	transcript1005.chr20.nic	protein_coding	31514422,31527484,31538179,31544947,31549029,31549207,31550064,31559611,31561634,31566210,31569120	31514734,31527582,31538261,31545035,31549114,31549332,31550121,31559647,31561736,31566295,31569567	Gene ID= ENSG00000101294.16 TPM= 3.72 Transcript Type= NA
chr20	31514428	31569567	31514428	31569567	+	ENST00000340852.9@HM13	ENST00000340852.9	protein_coding	31514428,31527484,31538179,31544947,31549029,31549207,31550064,31554746,31559611,31561634,31566210,31569120	31514734,31527582,31538261,31545035,31549114,31549332,31550121,31554829,31559647,31561736,31566295,31569567	Gene ID= ENSG00000101294.16 TPM= 33.46 Transcript Type= protein_coding
chr20	31514428	31569567	31514428	31569567	+	ENST00000335574.9@HM13	ENST00000335574.9	protein_coding	31514428,31527484,31538179,31544947,31549029,31549207,31550064,31554746,31559611,31561634,31566210,31568078,31569120	31514734,31527582,31538261,31545035,31549114,31549332,31550121,31554829,31559647,31561736,31566295,31568280,31569567	Gene ID= ENSG00000101294.16 TPM= 27.09 Transcript Type= protein_coding
chr20	31523270	31524554	31523270	31524554	-	transcript1018.chr20.nnic@NA	transcript1018.chr20.nnic	NA	31523270	31524554	Gene ID= novel_gene_chr20_1019 TPM= 2.12 Transcript Type= NA
chr20	31533480	31535096	31533480	31535096	+	transcript1016.chr20.nnic@NA	transcript1016.chr20.nnic	NA	31533480	31535096	Gene ID= novel_gene_chr20_1017 TPM= 2.12 Transcript Type= NA
chr20	31605283	31606515	31605283	31606515	+	ENST00000376105.4@ID1	ENST00000376105.4	protein_coding	31605283	31606515	Gene ID= ENSG00000125968.8 TPM= 10.62 Transcript Type= protein_coding
chr20	31605283	31606515	31605283	31606515	+	ENST00000376112.3@ID1	ENST00000376112.3	protein_coding	31605283,31606053	31605813,31606515	Gene ID= ENSG00000125968.8 TPM= 40.36 Transcript Type= protein_coding
chr20	31637888	31645006	31637888	31645006	+	ENST00000376075.3@COX4I2	ENST00000376075.3	protein_coding	31637888,31639018,31639933,31643404,31644768	31637962,31639099,31640097,31643535,31645006	Gene ID= ENSG00000131055.4 TPM= 6.37 Transcript Type= protein_coding
chr20	31642592	31645004	31642592	31645004	+	transcript1027.chr20.nnic@NA	transcript1027.chr20.nnic	NA	31642592	31645004	Gene ID= novel_gene_chr20_1028 TPM= 3.19 Transcript Type= NA
chr20	31664452	31723303	31664452	31723303	-	transcript1030.chr20.nic@BCL2L1	transcript1030.chr20.nic	protein_coding	31722618,31721655,31664452	31723303,31722330,31666086	Gene ID= ENSG00000171552.12 TPM= 14.87 Transcript Type= NA
chr20	31664452	31722898	31664452	31722898	-	ENST00000307677.4@BCL2L1	ENST00000307677.4	protein_coding	31722618,31721655,31664452	31722898,31722348,31666086	Gene ID= ENSG00000171552.12 TPM= 20.18 Transcript Type= protein_coding
chr20	31844301	31845619	31844301	31845619	-	ENST00000375978.4@FOXS1	ENST00000375978.4	protein_coding	31844301	31845619	Gene ID= ENSG00000179772.7 TPM= 11.68 Transcript Type= protein_coding
chr20	31861067	31870280	31861067	31870280	-	ENST00000398084.6@DUSP15	ENST00000398084.6	protein_coding	31870048,31869564,31867071,31864953,31863907,31862571,31861067	31870280,31869597,31867153,31865002,31863981,31862742,31861675	Gene ID= ENSG00000149599.15 TPM= 1.06 Transcript Type= protein_coding
chr20	31861067	31870747	31861067	31870747	-	ENST00000339738.9@DUSP15	ENST00000339738.9	protein_coding	31870317,31869564,31867071,31864953,31863907,31862571,31861067	31870747,31869597,31867153,31865002,31863981,31862742,31861675	Gene ID= ENSG00000149599.15 TPM= 1.06 Transcript Type= protein_coding
chr20	31944342	31952092	31944342	31952092	-	ENST00000202017.5@PDRG1	ENST00000202017.5	protein_coding	31951875,31950312,31948808,31946496,31944342	31952092,31950387,31948882,31946576,31945889	Gene ID= ENSG00000088356.5 TPM= 22.31 Transcript Type= protein_coding
chr20	32010408	32032180	32010408	32032180	+	transcript1039.chr20.nic@CCM2L	transcript1039.chr20.nic	protein_coding	32010408,32014904,32017800,32017979,32018943,32022660,32025856,32028995,32029700,32031001	32010484,32015071,32017883,32018162,32019409,32022795,32025919,32029124,32029838,32032180	Gene ID= ENSG00000101331.15 TPM= 7.97 Transcript Type= NA
chr20	32010450	32032180	32010450	32032180	+	ENST00000262659.12@CCM2L	ENST00000262659.12	protein_coding	32010450,32014904,32017800,32017979,32018943,32022660,32028995,32029700,32031001	32010484,32015071,32017883,32018162,32019409,32022795,32029124,32029838,32032180	Gene ID= ENSG00000101331.15 TPM= 1.59 Transcript Type= protein_coding
chr20	32109506	32167258	32109506	32167258	+	ENST00000398022.6@TM9SF4	ENST00000398022.6	protein_coding	32109506,32133013,32136074,32141497,32141766,32142982,32145091,32145312,32146785,32149634,32150622,32150800,32155103,32157794,32158451,32159992,32161276,32165295	32109755,32133126,32136173,32141665,32141895,32143105,32145209,32145423,32146855,32149766,32150703,32150875,32155186,32157969,32158514,32160111,32161365,32167258	Gene ID= ENSG00000101337.15 TPM= 29.74 Transcript Type= protein_coding
chr20	32109729	32158824	32109729	32158824	+	transcript1055.chr20.nic@TM9SF4	transcript1055.chr20.nic	protein_coding	32109729,32133013,32136074,32141497,32141766,32142982,32145091,32145312,32146785,32149634,32150622,32150800,32155103,32157794,32158451	32109755,32133126,32136173,32141665,32141895,32143105,32145209,32145423,32146855,32149766,32150703,32150875,32155186,32157969,32158824	Gene ID= ENSG00000101337.15 TPM= 2.12 Transcript Type= NA
chr20	32109722	32112248	32109722	32112248	+	transcript1060.chr20.nnic@NA	transcript1060.chr20.nnic	NA	32109722	32112248	Gene ID= novel_gene_chr20_1061 TPM= 3.19 Transcript Type= NA
chr20	32123868	32126061	32123868	32126061	-	transcript1062.chr20.nnic@NA	transcript1062.chr20.nnic	NA	32123868	32126061	Gene ID= novel_gene_chr20_1063 TPM= 6.37 Transcript Type= NA
chr20	32156944	32159882	32156944	32159882	-	transcript1064.chr20.nnic@NA	transcript1064.chr20.nnic	NA	32156944	32159882	Gene ID= novel_gene_chr20_1065 TPM= 2.12 Transcript Type= NA
chr20	32186477	32190360	32186477	32190360	-	ENST00000565928.1@TSPY26P	ENST00000565928.1	transcribed_processed_pseudogene	32186477	32190360	Gene ID= ENSG00000235217.6 TPM= 11.68 Transcript Type= processed_transcript
chr20	32207880	32238667	32207880	32238667	+	ENST00000375749.7@POFUT1	ENST00000375749.7	protein_coding	32207880,32210071,32215269,32216609,32228263,32230819,32234473	32208065,32210192,32215451,32216721,32228455,32231061,32238667	Gene ID= ENSG00000101346.13 TPM= 11.68 Transcript Type= protein_coding
chr20	32358344	32439318	32358344	32439318	+	ENST00000613218.4@ASXL1	ENST00000613218.4	protein_coding	32358344,32366384,32369013,32428128,32428325,32429338,32429901,32431321,32431583,32432880,32433284,32434432	32358832,32366467,32369123,32428248,32428422,32429431,32430053,32431484,32431679,32432985,32433917,32439318	Gene ID= ENSG00000171456.16 TPM= 7.79 Transcript Type= protein_coding
chr20	32428653	32437363	32428653	32437363	+	transcript1080.chr20.nnic@ASXL1	transcript1080.chr20.nnic	protein_coding	32428653,32431319,32431583,32432880,32433284,32434432	32430053,32431484,32431679,32432985,32433917,32437363	Gene ID= ENSG00000171456.16 TPM= 8.85 Transcript Type= NA
chr20	32428653	32437363	32428653	32437363	+	transcript1081.chr20.nic@ASXL1	transcript1081.chr20.nic	protein_coding	32428653,32431583,32432880,32433284,32434432	32431484,32431679,32432985,32433917,32437363	Gene ID= ENSG00000171456.16 TPM= 8.85 Transcript Type= NA
chr20	32358343	32372553	32358343	32372553	+	transcript1082.chr20.nic@ASXL1	transcript1082.chr20.nic	protein_coding	32358343,32366384,32369015,32372164	32358832,32366466,32369123,32372553	Gene ID= ENSG00000171456.16 TPM= 2.12 Transcript Type= NA
chr20	32358344	32372547	32358344	32372547	+	ENST00000542461.5@ASXL1	ENST00000542461.5	protein_coding	32358344,32366384,32369013,32372164	32358832,32366467,32369123,32372547	Gene ID= ENSG00000171456.16 TPM= 2.12 Transcript Type= protein_coding
chr20	32548507	32585074	32548507	32585074	-	ENST00000485364.1@NOL4L	ENST00000485364.1	protein_coding	32584570,32548507	32585074,32548886	Gene ID= ENSG00000197183.14 TPM= 4.25 Transcript Type= processed_transcript
chr20	32702691	32743997	32702691	32743997	-	ENST00000278980.10@COMMD7	ENST00000278980.10	protein_coding	32743308,32728089,32727893,32706704,32706583,32704814,32704440,32704023,32702691	32743997,32728142,32727995,32706760,32706620,32704904,32704489,32704071,32703458	Gene ID= ENSG00000149600.11 TPM= 95.06 Transcript Type= protein_coding
chr20	32702703	32743484	32702703	32743484	-	transcript1095.chr20.nic@COMMD7	transcript1095.chr20.nic	protein_coding	32743308,32728089,32727893,32706704,32706583,32704814,32704440,32702703	32743484,32728142,32727995,32706760,32706620,32704904,32704489,32704071	Gene ID= ENSG00000149600.11 TPM= 2.12 Transcript Type= NA
chr20	32702703	32743455	32702703	32743455	-	ENST00000446419.6@COMMD7	ENST00000446419.6	protein_coding	32743308,32728089,32727893,32706704,32706583,32704814,32704440,32704023,32702703	32743455,32728139,32727995,32706760,32706620,32704904,32704489,32704071,32703458	Gene ID= ENSG00000149600.11 TPM= 6.9 Transcript Type= protein_coding
chr20	32819893	32850405	32819893	32850405	+	ENST00000375571.5@MAPRE1	ENST00000375571.5	protein_coding	32819893,32825925,32833717,32836634,32839735,32846618,32848672	32820028,32826048,32833862,32836841,32839856,32846770,32850405	Gene ID= ENSG00000101367.8 TPM= 133.83 Transcript Type= protein_coding
chr20	32835366	32838695	32835366	32838695	-	transcript1105.chr20.nnic@NA	transcript1105.chr20.nnic	NA	32835366	32838695	Gene ID= novel_gene_chr20_1106 TPM= 2.12 Transcript Type= NA
chr20	32852956	32856332	32852956	32856332	-	transcript1108.chr20.nnic@AL035071.2	transcript1108.chr20.nnic	antisense_RNA	32854763,32854592,32852956	32856332,32854693,32853205	Gene ID= ENSG00000260536.1 TPM= 2.12 Transcript Type= NA
chr20	32850551	32853606	32850551	32853606	-	transcript1111.chr20.nnic@NA	transcript1111.chr20.nnic	NA	32850551	32853606	Gene ID= novel_gene_chr20_1112 TPM= 20.18 Transcript Type= NA
chr20	32856621	32858751	32856621	32858751	+	ENST00000569087.2@AL035071.1	ENST00000569087.2	lincRNA	32856621	32858751	Gene ID= ENSG00000260257.2 TPM= 8.5 Transcript Type= lincRNA
chr20	33358839	33401561	33358839	33401561	-	ENST00000346416.6@CDK5RAP1	ENST00000346416.6	protein_coding	33401428,33396761,33395013,33394032,33392142,33387323,33385650,33379461,33374115,33372642,33370499,33366859,33360351,33358839	33401561,33397084,33395116,33394066,33392242,33387533,33385770,33379691,33374212,33372697,33370629,33367008,33360491,33359123	Gene ID= ENSG00000101391.20 TPM= 32.58 Transcript Type= protein_coding
chr20	33358839	33401561	33358839	33401561	-	ENST00000339269.5@CDK5RAP1	ENST00000339269.5	protein_coding	33401428,33396761,33395013,33394032,33392142,33387323,33385650,33374115,33372642,33370499,33366859,33360351,33358839	33401561,33397084,33395116,33394066,33392242,33387533,33385770,33374212,33372697,33370629,33367008,33360491,33359123	Gene ID= ENSG00000101391.20 TPM= 1.77 Transcript Type= protein_coding
chr20	33358839	33401517	33358839	33401517	-	ENST00000473997.5@CDK5RAP1	ENST00000473997.5	protein_coding	33401428,33396761,33395013,33394032,33392142,33387323,33385650,33379461,33374115,33372642,33370499,33366859,33360351,33358839	33401517,33396936,33395116,33394066,33392242,33387533,33385770,33379691,33374212,33372697,33370629,33367008,33360491,33359123	Gene ID= ENSG00000101391.20 TPM= 1.77 Transcript Type= protein_coding
chr20	33399164	33401538	33399164	33401538	-	transcript1124.chr20.nnic@NA	transcript1124.chr20.nnic	NA	33399164	33401538	Gene ID= novel_gene_chr20_1125 TPM= 2.12 Transcript Type= NA
chr20	33407955	33443892	33407955	33443892	-	ENST00000217381.2@SNTA1	ENST00000217381.2	protein_coding	33443311,33438841,33417719,33412575,33412296,33410135,33408701,33407955	33443892,33439026,33417923,33412782,33412426,33410331,33408888,33408599	Gene ID= ENSG00000101400.5 TPM= 629.37 Transcript Type= protein_coding
chr20	33490068	33624255	33490068	33624255	+	transcript1160.chr20.nic@CBFA2T2	transcript1160.chr20.nic	protein_coding	33490068,33606956,33611094,33619517,33623115	33490301,33607099,33611335,33619606,33624255	Gene ID= ENSG00000078699.21 TPM= 3.19 Transcript Type= NA
chr20	33490068	33614130	33490068	33614130	+	transcript1161.chr20.nic@CBFA2T2	transcript1161.chr20.nic	protein_coding	33490068,33606956,33611094	33490301,33607099,33614130	Gene ID= ENSG00000078699.21 TPM= 2.12 Transcript Type= NA
chr20	33657087	33674476	33657087	33674476	-	transcript1173.chr20.nic@NECAB3	transcript1173.chr20.nic	protein_coding	33674224,33672398,33670684,33669687,33669375,33660259,33659885,33659653,33658722,33658477,33657942,33657087	33674476,33672422,33670792,33669712,33669472,33660395,33660003,33659732,33658834,33658554,33658033,33657857	Gene ID= ENSG00000125967.16 TPM= 15.85 Transcript Type= NA
chr20	33657087	33674476	33657087	33674476	-	transcript1179.chr20.nic@NECAB3	transcript1179.chr20.nic	protein_coding	33674224,33672398,33670684,33669687,33669375,33659885,33658722,33658477,33657942,33657087	33674476,33672422,33670792,33669712,33669472,33660395,33659732,33658554,33658033,33657857	Gene ID= ENSG00000125967.16 TPM= 6.45 Transcript Type= NA
chr20	33657087	33674463	33657087	33674463	-	ENST00000375238.8@NECAB3	ENST00000375238.8	protein_coding	33674224,33672398,33670684,33669687,33669375,33660259,33659885,33659653,33659497,33658722,33658477,33657942,33657087	33674463,33672422,33670792,33669712,33669472,33660395,33660003,33659732,33659550,33658834,33658554,33658033,33657857	Gene ID= ENSG00000125967.16 TPM= 53.37 Transcript Type= protein_coding
chr20	33657087	33674408	33657087	33674408	-	ENST00000246190.10@NECAB3	ENST00000246190.10	protein_coding	33674224,33672398,33670684,33669687,33669375,33660259,33659885,33659497,33658722,33658477,33657942,33657087	33674408,33672422,33670792,33669712,33669472,33660395,33660003,33659732,33658834,33658554,33658033,33657857	Gene ID= ENSG00000125967.16 TPM= 13.72 Transcript Type= protein_coding
chr20	33657088	33674420	33657088	33674420	-	ENST00000488489.5@NECAB3	ENST00000488489.5	protein_coding	33674224,33672398,33670684,33669687,33669375,33659885,33659653,33659497,33658722,33658477,33657942,33657088	33674420,33672422,33670781,33669712,33669472,33660395,33659732,33659550,33658834,33658554,33658033,33657857	Gene ID= ENSG00000125967.16 TPM= 8.07 Transcript Type= nonsense_mediated_decay
chr20	33666498	33668525	33666498	33668525	+	ENST00000330271.4@ACTL10	ENST00000330271.4	protein_coding	33666498	33668525	Gene ID= ENSG00000182584.4 TPM= 1.06 Transcript Type= protein_coding
chr20	33675683	33686404	33675683	33686404	-	ENST00000343380.5@E2F1	ENST00000343380.5	protein_coding	33686004,33680326,33679755,33678201,33677426,33677105,33675683	33686404,33680416,33679974,33678353,33677540,33677330,33676979	Gene ID= ENSG00000101412.12 TPM= 7.44 Transcript Type= protein_coding
chr20	33704112	33705278	33704112	33705278	-	transcript1185.chr20.nnic@NA	transcript1185.chr20.nnic	NA	33704112	33705278	Gene ID= novel_gene_chr20_1186 TPM= 2.12 Transcript Type= NA
chr20	33705927	33720310	33705927	33720310	-	transcript1187.chr20.nnic@PXMP4	transcript1187.chr20.nnic	protein_coding	33720095,33714674,33710555,33707125,33705927	33720310,33714736,33710753,33707969,33706170	Gene ID= ENSG00000101417.11 TPM= 2.12 Transcript Type= NA
chr20	33811329	33849628	33811329	33849628	+	transcript1193.chr20.nic@CHMP4B	transcript1193.chr20.nic	protein_coding	33811329,33848467	33811658,33849628	Gene ID= ENSG00000101421.3 TPM= 2.12 Transcript Type= NA
chr20	33830935	33832144	33830935	33832144	-	transcript1194.chr20.nnic@NA	transcript1194.chr20.nnic	NA	33830935	33832144	Gene ID= novel_gene_chr20_1195 TPM= 2.12 Transcript Type= NA
chr20	33993764	34080271	33993764	34080271	+	transcript1196.chr20.nic@RALY	transcript1196.chr20.nic	protein_coding	33993764,34031522,34065044,34072066,34073563,34073819,34075874,34076702,34077028,34078505,34079910	33994131,34031604,34065160,34072330,34073635,34073866,34076040,34076815,34077245,34078553,34080271	Gene ID= ENSG00000125970.11 TPM= 5.31 Transcript Type= NA
chr20	33993722	34080271	33993722	34080271	+	ENST00000246194.7@RALY	ENST00000246194.7	protein_coding	33993722,34031522,34072066,34073563,34073819,34075874,34076702,34077028,34078505,34079910	33994131,34031604,34072330,34073635,34073866,34076040,34076815,34077245,34078553,34080271	Gene ID= ENSG00000125970.11 TPM= 146.58 Transcript Type= protein_coding
chr20	34088298	34112332	34088298	34112332	-	ENST00000374980.2@EIF2S2	ENST00000374980.2	protein_coding	34112096,34105368,34103462,34098498,34097416,34096657,34093675,34090517,34088298	34112332,34105545,34103565,34098633,34097516,34096805,34093731,34090602,34089905	Gene ID= ENSG00000125977.6 TPM= 111 Transcript Type= protein_coding
chr20	34089440	34112277	34089440	34112277	-	transcript1214.chr20.nnic@EIF2S2	transcript1214.chr20.nnic	protein_coding	34112096,34105368,34103462,34098498,34097416,34096657,34090517,34089440	34112277,34105545,34103565,34098633,34097516,34096805,34090602,34089905	Gene ID= ENSG00000125977.6 TPM= 14.34 Transcript Type= NA
chr20	34262664	34269344	34262664	34269344	+	transcript1220.chr20.nic@ASIP	transcript1220.chr20.nic	protein_coding	34262664,34268991	34262893,34269344	Gene ID= ENSG00000101440.9 TPM= 15.93 Transcript Type= NA
chr20	34280268	34303319	34280268	34303319	-	transcript1223.chr20.nnic@AHCY	transcript1223.chr20.nnic	protein_coding	34303243,34295395,34294081,34292358,34291419,34290731,34290551,34290332,34285440,34280268	34303319,34295585,34294156,34292507,34291531,34290938,34290638,34290449,34285511,34281165	Gene ID= ENSG00000101444.12 TPM= 3.19 Transcript Type= NA
chr20	34280268	34303014	34280268	34303014	-	transcript1224.chr20.nic@AHCY	transcript1224.chr20.nic	protein_coding	34301758,34295395,34294081,34292358,34291419,34290731,34290551,34290332,34285440,34280268	34303014,34295585,34294156,34292507,34291531,34290938,34290638,34290449,34285634,34281165	Gene ID= ENSG00000101444.12 TPM= 6.9 Transcript Type= NA
chr20	34280268	34303348	34280268	34303348	-	ENST00000217426.6@AHCY	ENST00000217426.6	protein_coding	34303243,34295395,34294081,34292358,34291419,34290731,34290551,34290332,34285440,34280268	34303348,34295585,34294156,34292507,34291531,34290938,34290638,34290449,34285634,34281165	Gene ID= ENSG00000101444.12 TPM= 54.7 Transcript Type= protein_coding
chr20	34363235	34511393	34363235	34511393	+	ENST00000374864.8@ITCH	ENST00000374864.8	protein_coding	34363235,34369394,34393791,34408651,34412515,34413742,34424480,34438474,34440155,34442208,34445287,34449411,34457390,34462093,34470048,34471444,34477772,34479630,34480599,34481066,34489266,34489822,34492501,34504331,34507695	34363349,34369470,34393881,34408792,34412639,34413879,34424525,34438631,34440344,34442303,34445461,34449480,34457474,34462221,34470120,34471515,34477860,34479789,34480732,34481206,34489386,34489926,34492597,34504403,34511393	Gene ID= ENSG00000078747.14 TPM= 1.06 Transcript Type= protein_coding
chr20	34363281	34508676	34363281	34508676	+	transcript1230.chr20.nic@ITCH	transcript1230.chr20.nic	protein_coding	34363281,34369394,34393791,34408651,34412515,34413742,34424480,34438474,34440155,34442208,34445287,34449411,34457390,34462093,34470048,34471444,34477772,34479695,34480599,34481066,34489266,34489822,34492501,34504331,34507695	34363349,34369470,34393881,34408792,34412639,34413879,34424525,34438631,34440344,34442303,34445461,34449480,34457474,34462221,34470120,34471515,34477860,34479789,34480732,34481206,34489386,34489926,34492597,34504403,34508676	Gene ID= ENSG00000078747.14 TPM= 2.12 Transcript Type= NA
chr20	34433038	34433633	34433038	34433633	+	transcript1236.chr20.nnic@NA	transcript1236.chr20.nnic	NA	34433038	34433633	Gene ID= novel_gene_chr20_1237 TPM= 2.12 Transcript Type= NA
chr20	34516409	34540958	34516409	34540958	+	ENST00000357156.6@DYNLRB1	ENST00000357156.6	protein_coding	34516409,34526268,34534628,34540581	34516461,34526343,34534795,34540958	Gene ID= ENSG00000125971.16 TPM= 81.26 Transcript Type= protein_coding
chr20	34516414	34540958	34516414	34540958	+	ENST00000480759.1@DYNLRB1	ENST00000480759.1	protein_coding	34516414,34526268,34529852,34534628,34540581	34516461,34526343,34530234,34534795,34540958	Gene ID= ENSG00000125971.16 TPM= 1.59 Transcript Type= processed_transcript
chr20	34526486	34528895	34526486	34528895	-	transcript1243.chr20.nnic@Y_RNA	transcript1243.chr20.nnic	misc_RNA	34528349,34526486	34528895,34528016	Gene ID= ENSG00000206582.1 TPM= 3.19 Transcript Type= NA
chr20	34558108	34560345	34558108	34560345	+	ENST00000360668.7@MAP1LC3A	ENST00000360668.7	protein_coding	34558108,34559208,34559347,34559736	34558908,34559263,34559453,34560345	Gene ID= ENSG00000101460.12 TPM= 108.34 Transcript Type= protein_coding
chr20	34558718	34560345	34558718	34560345	+	ENST00000397709.1@MAP1LC3A	ENST00000397709.1	protein_coding	34558718,34559208,34559347,34559736,34560172	34558908,34559263,34559453,34559905,34560345	Gene ID= ENSG00000101460.12 TPM= 2.12 Transcript Type= protein_coding
chr20	34560542	34677085	34560542	34677085	-	ENST00000217446.7@PIGU	ENST00000217446.7	protein_coding	34676956,34657180,34645275,34644164,34637876,34634615,34616042,34588453,34585437,34581548,34575104,34560542	34677085,34657244,34645334,34644226,34637985,34634715,34616139,34588607,34585580,34581672,34575246,34560979	Gene ID= ENSG00000101464.10 TPM= 9.56 Transcript Type= protein_coding
chr20	34714775	34742217	34714775	34742217	-	transcript1262.chr20.nic@NCOA6	transcript1262.chr20.nic	protein_coding	34740363,34736690,34732559,34727259,34714775	34742217,34736758,34732595,34727407,34715365	Gene ID= ENSG00000198646.13 TPM= 8.5 Transcript Type= NA
chr20	34704290	34713439	34704290	34713439	+	ENST00000374810.7@TP53INP2	ENST00000374810.7	protein_coding	34704290,34705358,34708691,34709236,34710058	34704512,34705474,34708863,34709524,34713439	Gene ID= ENSG00000078804.12 TPM= 61.07 Transcript Type= protein_coding
chr20	34704732	34713439	34704732	34713439	+	transcript1261.chr20.nic@TP53INP2	transcript1261.chr20.nic	protein_coding	34704732,34705358,34708691,34709236,34710058	34704778,34705474,34708863,34709524,34713439	Gene ID= ENSG00000078804.12 TPM= 61.07 Transcript Type= NA
chr20	34860638	34872888	34860638	34872888	-	transcript1285.chr20.nic@GGT7	transcript1285.chr20.nic	protein_coding	34872647,34863313,34862814,34860638	34872888,34863548,34862965,34861562	Gene ID= ENSG00000131067.16 TPM= 10.62 Transcript Type= NA
chr20	34855790	34859793	34855790	34859793	-	transcript1292.chr20.nic@GGT7	transcript1292.chr20.nic	protein_coding	34859443,34855790	34859793,34856893	Gene ID= ENSG00000131067.16 TPM= 3.19 Transcript Type= NA
chr20	34844720	34872860	34844720	34872860	-	ENST00000336431.9@GGT7	ENST00000336431.9	protein_coding	34872647,34863313,34862814,34861445,34860254,34859969,34859443,34856806,34854796,34854531,34852389,34852155,34851231,34849961,34844720	34872860,34863548,34862965,34861562,34860321,34860042,34859639,34856893,34854923,34854619,34852538,34852272,34851368,34850060,34845491	Gene ID= ENSG00000131067.16 TPM= 3.19 Transcript Type= protein_coding
chr20	34876435	34927962	34876435	34927962	+	ENST00000360596.6@ACSS2	ENST00000360596.6	protein_coding	34876435,34882794,34913096,34913393,34913753,34914096,34914323,34919435,34920539,34921006,34921330,34921544,34921786,34923323,34925698,34926105,34926877,34927087	34876823,34882989,34913187,34913496,34913825,34914171,34914437,34919572,34920709,34921139,34921462,34921600,34921866,34923431,34925766,34926281,34926951,34927962	Gene ID= ENSG00000131069.19 TPM= 22.84 Transcript Type= protein_coding
chr20	34876614	34927962	34876614	34927962	+	ENST00000253382.5@ACSS2	ENST00000253382.5	protein_coding	34876614,34882794,34913096,34913393,34913753,34914096,34914323,34915218,34919435,34920539,34921006,34921330,34921544,34921786,34923323,34925698,34926105,34926877,34927087	34876823,34882989,34913187,34913496,34913825,34914171,34914437,34915256,34919572,34920709,34921139,34921462,34921600,34921866,34923431,34925766,34926281,34926951,34927962	Gene ID= ENSG00000131069.19 TPM= 53.64 Transcript Type= protein_coding
chr20	34928430	34955817	34928430	34955817	-	ENST00000216951.6@GSS	ENST00000216951.6	protein_coding	34955727,34951724,34945953,34942931,34942488,34941713,34936943,34936763,34935576,34931939,34931336,34929401,34928430	34955817,34951860,34946098,34943006,34942627,34941829,34937023,34936840,34935642,34932133,34931417,34929590,34928951	Gene ID= ENSG00000100983.9 TPM= 46.2 Transcript Type= protein_coding
chr20	34928430	34955808	34928430	34955808	-	transcript1312.chr20.nic@GSS	transcript1312.chr20.nic	protein_coding	34955727,34951724,34945953,34942488,34941713,34936943,34936763,34935576,34931939,34931336,34929401,34928430	34955808,34951860,34946098,34943006,34941829,34937023,34936840,34935642,34932133,34931417,34929590,34928951	Gene ID= ENSG00000100983.9 TPM= 7.97 Transcript Type= NA
chr20	34977667	34982025	34977667	34982025	+	ENST00000470929.5@MYH7B	ENST00000470929.5	protein_coding	34977667,34977934,34979390,34979661,34980578,34981033	34977680,34978096,34979496,34979804,34980734,34982025	Gene ID= ENSG00000078814.15 TPM= 11.68 Transcript Type= retained_intron
chr20	35001245	35002437	35001245	35002437	+	ENST00000453028.5@MYH7B	ENST00000453028.5	protein_coding	35001245,35001431,35001948,35002159	35001349,35001526,35002085,35002437	Gene ID= ENSG00000078814.15 TPM= 3.19 Transcript Type= protein_coding
chr20	34981796	34983239	34981796	34983239	-	transcript1335.chr20.nnic@NA	transcript1335.chr20.nnic	NA	34981796	34983239	Gene ID= novel_gene_chr20_1336 TPM= 4.25 Transcript Type= NA
chr20	34982624	34984685	34982624	34984685	-	transcript1333.chr20.nnic@NA	transcript1333.chr20.nnic	NA	34982624	34984685	Gene ID= novel_gene_chr20_1334 TPM= 9.56 Transcript Type= NA
chr20	35002404	35092814	35002404	35092814	-	transcript1300.chr20.nnic@TRPC4AP	transcript1300.chr20.nnic	protein_coding	35092614,35078046,35069296,35057514,35054976,35049866,35044505,35035123,35021190,35016008,35013008,35010187,35008664,35007550,35006435,35005695,35004458,35003410,35003097,35002404	35092814,35078174,35069412,35057571,35055031,35049994,35044712,35035308,35021332,35016139,35013066,35010288,35008747,35007640,35006575,35005803,35004570,35003616,35003283,35002641	Gene ID= ENSG00000100991.11 TPM= 3.61 Transcript Type= NA
chr20	35002404	35092871	35002404	35092871	-	ENST00000252015.2@TRPC4AP	ENST00000252015.2	protein_coding	35092614,35078046,35069296,35057514,35054976,35049866,35044505,35035123,35021190,35016008,35013008,35010187,35008664,35007550,35006435,35005695,35004458,35003410,35002404	35092871,35078174,35069412,35057571,35055031,35049994,35044712,35035308,35021356,35016139,35013066,35010288,35008747,35007640,35006575,35005803,35004570,35003616,35003283	Gene ID= ENSG00000100991.11 TPM= 57.96 Transcript Type= protein_coding
chr20	35002408	35092814	35002408	35092814	-	transcript1307.chr20.nic@TRPC4AP	transcript1307.chr20.nic	protein_coding	35092614,35078046,35069296,35057514,35054976,35049866,35044505,35035123,35021190,35016008,35013008,35010187,35008664,35007550,35006435,35005695,35004458,35002408	35092814,35078174,35069412,35057571,35055031,35049994,35044712,35035308,35021356,35016139,35013066,35010288,35008747,35007640,35006575,35005803,35004570,35003616	Gene ID= ENSG00000100991.11 TPM= 5.39 Transcript Type= NA
chr20	35075976	35092814	35075976	35092814	-	transcript1332.chr20.nic@TRPC4AP	transcript1332.chr20.nic	protein_coding	35092614,35075976	35092814,35078174	Gene ID= ENSG00000100991.11 TPM= 3.19 Transcript Type= NA
chr20	35002404	35092807	35002404	35092807	-	ENST00000451813.6@TRPC4AP	ENST00000451813.6	protein_coding	35092614,35078046,35069296,35057514,35054976,35049866,35044505,35035123,35021190,35016008,35013008,35010187,35008664,35007550,35006435,35005695,35004458,35003410,35002404	35092807,35078174,35069412,35057571,35055031,35049994,35044712,35035308,35021332,35016139,35013066,35010288,35008747,35007640,35006575,35005803,35004570,35003616,35003283	Gene ID= ENSG00000100991.11 TPM= 30.35 Transcript Type= protein_coding
chr20	35115357	35147364	35115357	35147364	-	ENST00000374492.7@EDEM2	ENST00000374492.7	protein_coding	35147152,35146825,35144979,35142373,35137880,35134738,35131642,35126251,35123890,35118598,35115357	35147364,35146935,35145018,35142478,35138005,35134949,35131783,35126375,35124034,35118719,35115933	Gene ID= ENSG00000088298.12 TPM= 18.06 Transcript Type= protein_coding
chr20	35115364	35147352	35115364	35147352	-	transcript1341.chr20.nnic@EDEM2	transcript1341.chr20.nnic	protein_coding	35147152,35146825,35144979,35142373,35137880,35134738,35131642,35126251,35123890,35115364	35147352,35146935,35145018,35142478,35138005,35134949,35131783,35126375,35124034,35115933	Gene ID= ENSG00000088298.12 TPM= 2.12 Transcript Type= NA
chr20	35115364	35147319	35115364	35147319	-	ENST00000374491.3@EDEM2	ENST00000374491.3	protein_coding	35147152,35144979,35142373,35137880,35134738,35131642,35126251,35123890,35118598,35115364	35147319,35145018,35142478,35138005,35134949,35131783,35126375,35124034,35118719,35115933	Gene ID= ENSG00000088298.12 TPM= 2.12 Transcript Type= protein_coding
chr20	35172073	35177362	35172073	35177362	+	ENST00000216968.4@PROCR	ENST00000216968.4	protein_coding	35172073,35174702,35176168,35176698	35172224,35174953,35176446,35177362	Gene ID= ENSG00000101000.5 TPM= 4.25 Transcript Type= protein_coding
chr20	35268579	35278149	35268579	35278149	-	transcript1347.chr20.nnic@MMP24-AS1	transcript1347.chr20.nnic	protein_coding	35278009,35272005,35268579	35278149,35272145,35269023	Gene ID= ENSG00000126005.16 TPM= 2.12 Transcript Type= NA
chr20	35276361	35278144	35276361	35278144	-	transcript1351.chr20.nic@MMP24-AS1	transcript1351.chr20.nic	protein_coding	35278046,35277390,35276361	35278144,35277932,35277297	Gene ID= ENSG00000126005.16 TPM= 3.19 Transcript Type= NA
chr20	35276361	35278027	35276361	35278027	-	ENST00000435366.2@MMP24-AS1	ENST00000435366.2	protein_coding	35278009,35277390,35276361	35278027,35277932,35277297	Gene ID= ENSG00000126005.16 TPM= 15.93 Transcript Type= nonsense_mediated_decay
chr20	35277342	35278129	35277342	35278129	-	ENST00000456790.1@MMP24-AS1	ENST00000456790.1	protein_coding	35278009,35277342	35278129,35277932	Gene ID= ENSG00000126005.16 TPM= 6.37 Transcript Type= protein_coding
chr20	35262214	35263397	35262214	35263397	-	transcript1361.chr20.nnic@NA	transcript1361.chr20.nnic	NA	35262214	35263397	Gene ID= novel_gene_chr20_1362 TPM= 3.19 Transcript Type= NA
chr20	35266835	35269038	35266835	35269038	+	transcript1359.chr20.nnic@NA	transcript1359.chr20.nnic	NA	35266835	35269038	Gene ID= novel_gene_chr20_1360 TPM= 9.56 Transcript Type= NA
chr20	35278907	35284717	35278907	35284717	-	ENST00000621148.4@EIF6	ENST00000621148.4	protein_coding	35284697,35284381,35284176,35280654,35279942,35279566,35278907	35284717,35284492,35284261,35280829,35280118,35279747,35279206	Gene ID= ENSG00000242372.6 TPM= 1.33 Transcript Type= protein_coding
chr20	35278911	35284985	35278911	35284985	-	ENST00000374450.7@EIF6	ENST00000374450.7	protein_coding	35284726,35284381,35284176,35280654,35279942,35279566,35278911	35284985,35284492,35284261,35280829,35280118,35279747,35279206	Gene ID= ENSG00000242372.6 TPM= 35.32 Transcript Type= protein_coding
chr20	35278911	35284715	35278911	35284715	-	ENST00000374436.7@EIF6	ENST00000374436.7	protein_coding	35284381,35284176,35280654,35279942,35279566,35278911	35284715,35284261,35280829,35280118,35279747,35279206	Gene ID= ENSG00000242372.6 TPM= 8.76 Transcript Type= protein_coding
chr20	35278911	35284522	35278911	35284522	-	transcript1367.chr20.nic@EIF6	transcript1367.chr20.nic	protein_coding	35284176,35279942,35279566,35278911	35284522,35280118,35279747,35279206	Gene ID= ENSG00000242372.6 TPM= 2.39 Transcript Type= NA
chr20	35302566	35411988	35302566	35411988	-	transcript1369.chr20.nic@UQCC1	transcript1369.chr20.nic	protein_coding	35411940,35394092,35392236,35384038,35381918,35374184,35366557,35347164,35314688,35306666,35302566	35411988,35394196,35392277,35384133,35382025,35374256,35366614,35347272,35314765,35306779,35304069	Gene ID= ENSG00000101019.21 TPM= 6.9 Transcript Type= NA
chr20	35302566	35412141	35302566	35412141	-	ENST00000374385.9@UQCC1	ENST00000374385.9	protein_coding	35411940,35394092,35384038,35381918,35374184,35366557,35347164,35314688,35306666,35302566	35412141,35394196,35384133,35382025,35374256,35366614,35347272,35314765,35306779,35304069	Gene ID= ENSG00000101019.21 TPM= 52.58 Transcript Type= protein_coding
chr20	35345719	35396618	35345719	35396618	-	transcript1379.chr20.nnic@UQCC1	transcript1379.chr20.nnic	protein_coding	35396508,35394092,35384038,35381918,35374184,35366557,35345719	35396618,35394196,35384133,35382025,35374256,35366614,35347272	Gene ID= ENSG00000101019.21 TPM= 4.25 Transcript Type= NA
chr20	35344110	35411974	35344110	35411974	-	ENST00000397554.5@UQCC1	ENST00000397554.5	protein_coding	35411940,35394092,35384038,35381918,35374184,35366557,35344110	35411974,35394196,35384133,35382025,35374256,35366614,35347272	Gene ID= ENSG00000101019.21 TPM= 5.31 Transcript Type= protein_coding
chr20	35455175	35466054	35455175	35466054	+	ENST00000420564.5@CEP250	ENST00000420564.5	protein_coding	35455175,35458304,35459983,35462265,35463575,35465743,35466039	35455237,35458374,35460105,35462553,35463631,35465825,35466054	Gene ID= ENSG00000126001.15 TPM= 1.06 Transcript Type= protein_coding
chr20	35455329	35519280	35455329	35519280	+	ENST00000397527.5@CEP250	ENST00000397527.5	protein_coding	35455329,35458304,35459983,35462265,35463575,35465743,35466039,35466966,35467304,35469890,35472050,35472673,35473374,35473870,35475502,35476449,35477871,35479231,35479646,35479976,35490637,35491212,35493429,35494524,35496577,35497719,35498595,35500049,35501845,35502390,35507738,35508035,35508943,35509998,35511363	35455751,35458374,35460105,35462553,35463631,35465825,35466204,35467072,35467555,35469986,35472151,35472831,35473552,35474052,35475646,35476595,35478101,35479424,35479773,35480145,35490804,35491346,35493572,35494657,35496715,35498067,35498716,35500169,35501966,35505005,35507851,35508190,35509044,35510054,35519280	Gene ID= ENSG00000126001.15 TPM= 3.19 Transcript Type= protein_coding
chr20	35542021	35557634	35542021	35557634	+	ENST00000348547.6@ERGIC3	ENST00000348547.6	protein_coding	35542021,35542323,35542513,35542822,35547412,35548509,35548808,35555044,35556033,35556207,35556973,35557194,35557425	35542185,35542393,35542600,35542941,35547505,35548674,35548865,35555075,35556129,35556271,35557109,35557249,35557634	Gene ID= ENSG00000125991.19 TPM= 142.33 Transcript Type= protein_coding
chr20	35617024	35621049	35617024	35621049	+	transcript1399.chr20.nic@SPAG4	transcript1399.chr20.nic	protein_coding	35617024,35617520,35617779,35618087,35618450,35618612,35618923,35619195,35619579,35620684,35620876	35617240,35617586,35617840,35618130,35618475,35618720,35618998,35619310,35619746,35620773,35621049	Gene ID= ENSG00000061656.9 TPM= 2.12 Transcript Type= NA
chr20	35626044	35664931	35626044	35664931	-	transcript1403.chr20.nic@CPNE1	transcript1403.chr20.nic	protein_coding	35664760,35658930,35655202,35632795,35632517,35632311,35632163,35631945,35631688,35631492,35631268,35631114,35630901,35630741,35630439,35627280,35626567,35626044	35664931,35659014,35655344,35632923,35632696,35632385,35632234,35632025,35631777,35631578,35631354,35631173,35631034,35630795,35630490,35627413,35626803,35626381	Gene ID= ENSG00000214078.12 TPM= 4.94 Transcript Type= NA
chr20	35626044	35664933	35626044	35664933	-	transcript1404.chr20.nic@CPNE1	transcript1404.chr20.nic	protein_coding	35664760,35658930,35632795,35632517,35632311,35632163,35631945,35631688,35631492,35631268,35631114,35630901,35630741,35630439,35627280,35626567,35626044	35664933,35658982,35632923,35632696,35632385,35632234,35632025,35631777,35631578,35631354,35631173,35631034,35630795,35630490,35627413,35626803,35626381	Gene ID= ENSG00000214078.12 TPM= 8.13 Transcript Type= NA
chr20	35626044	35664933	35626044	35664933	-	transcript1407.chr20.nic@CPNE1	transcript1407.chr20.nic	protein_coding	35664760,35658930,35632795,35632517,35632311,35632163,35631945,35631688,35631492,35631268,35631114,35630901,35630741,35630439,35627280,35626735,35626044	35664933,35658982,35632923,35632696,35632385,35632234,35632025,35631777,35631578,35631354,35631173,35631034,35630795,35630490,35627413,35626803,35626381	Gene ID= ENSG00000214078.12 TPM= 2.12 Transcript Type= NA
chr20	35626044	35664931	35626044	35664931	-	transcript1409.chr20.nic@CPNE1	transcript1409.chr20.nic	protein_coding	35664802,35632795,35632517,35632311,35632163,35631945,35631688,35631492,35631268,35631114,35630901,35630741,35630439,35627280,35626567,35626044	35664931,35632923,35632696,35632385,35632234,35632025,35631777,35631578,35631354,35631173,35631034,35630795,35630490,35627413,35626803,35626381	Gene ID= ENSG00000214078.12 TPM= 8.13 Transcript Type= NA
chr20	35626044	35664934	35626044	35664934	-	transcript1415.chr20.nic@CPNE1	transcript1415.chr20.nic	protein_coding	35664760,35632795,35632517,35632311,35632163,35631945,35631688,35631492,35631268,35631114,35630439,35627280,35626567,35626044	35664934,35632923,35632696,35632385,35632234,35632025,35631777,35631578,35631354,35631173,35631034,35627413,35626803,35626381	Gene ID= ENSG00000214078.12 TPM= 3.61 Transcript Type= NA
chr20	35626044	35664876	35626044	35664876	-	ENST00000397443.6@CPNE1	ENST00000397443.6	protein_coding	35664760,35632795,35632517,35632311,35632163,35631945,35631688,35631492,35631268,35631114,35630901,35630741,35630439,35627280,35626567,35626044	35664876,35632923,35632696,35632385,35632234,35632025,35631777,35631578,35631354,35631173,35631034,35630795,35630490,35627413,35626803,35626381	Gene ID= ENSG00000214078.12 TPM= 8.13 Transcript Type= protein_coding
chr20	35668983	35699349	35668983	35699349	-	ENST00000397425.5@NFS1	ENST00000397425.5	protein_coding	35699310,35698481,35697684,35696377,35690413,35681888,35680737,35675045,35674512,35674350,35673601,35672755,35668983	35699349,35698590,35697800,35696460,35690565,35681981,35680871,35675202,35674617,35674431,35673684,35672844,35669685	Gene ID= ENSG00000244005.12 TPM= 50.98 Transcript Type= protein_coding
chr20	35694572	35699304	35694572	35699304	-	ENST00000306750.3@NFS1	ENST00000306750.3	protein_coding	35699192,35698481,35697684,35696377,35694572	35699304,35698590,35697800,35696460,35694885	Gene ID= ENSG00000244005.12 TPM= 1.06 Transcript Type= protein_coding
chr20	35699353	35700984	35699353	35700984	+	ENST00000374077.7@ROMO1	ENST00000374077.7	protein_coding	35699353,35699633,35700798	35699456,35699763,35700984	Gene ID= ENSG00000125995.15 TPM= 157.2 Transcript Type= protein_coding
chr20	35703610	35742312	35703610	35742312	-	ENST00000361162.10@RBM39	ENST00000361162.10	protein_coding	35741941,35740824,35738968,35731941,35729462,35729312,35725038,35724570,35721740,35716740,35714185,35713019,35709224,35707120,35705225,35704668,35703610	35742312,35740887,35739017,35732135,35729527,35729365,35725155,35724722,35721877,35716805,35714389,35713096,35709256,35707201,35705330,35704746,35704581	Gene ID= ENSG00000131051.22 TPM= 18.41 Transcript Type= protein_coding
chr20	35703611	35742237	35703611	35742237	-	transcript1431.chr20.nic@RBM39	transcript1431.chr20.nic	protein_coding	35741941,35740824,35738968,35731941,35729462,35729312,35725038,35724570,35721740,35716740,35714185,35713019,35709224,35707120,35705225,35704668,35703611	35742237,35740887,35740597,35732135,35729527,35729365,35725155,35724722,35721877,35716805,35714389,35713096,35709274,35707201,35705330,35704746,35704581	Gene ID= ENSG00000131051.22 TPM= 5.84 Transcript Type= NA
chr20	35703611	35742274	35703611	35742274	-	ENST00000403542.6@RBM39	ENST00000403542.6	protein_coding	35741941,35740824,35740525,35738968,35731941,35729462,35729312,35725038,35724570,35721740,35716740,35714185,35713019,35709224,35707120,35705225,35704668,35703611	35742274,35740887,35740597,35739017,35732135,35729527,35729365,35725155,35724722,35721877,35716805,35714389,35713096,35709274,35707201,35705330,35704746,35704581	Gene ID= ENSG00000131051.22 TPM= 9.38 Transcript Type= nonsense_mediated_decay
chr20	35704326	35742248	35704326	35742248	-	ENST00000444878.5@RBM39	ENST00000444878.5	protein_coding	35741941,35740824,35740525,35738968,35731941,35729462,35729312,35725038,35724570,35721740,35716740,35714185,35713019,35709224,35707120,35705225,35704668,35704326	35742248,35740887,35740597,35739017,35732135,35729527,35729365,35725155,35724722,35721877,35716805,35714389,35713096,35709256,35707201,35705330,35704746,35704581	Gene ID= ENSG00000131051.22 TPM= 8.5 Transcript Type= nonsense_mediated_decay
chr20	35726790	35727414	35726790	35727414	+	transcript1474.chr20.nnic@NA	transcript1474.chr20.nnic	NA	35726790	35727414	Gene ID= novel_gene_chr20_1475 TPM= 6.37 Transcript Type= NA
chr20	35771983	35950381	35771983	35950381	+	ENST00000374012.7@PHF20	ENST00000374012.7	protein_coding	35771983,35801491,35842573,35847350,35858302,35863013,35869438,35870955,35871650,35899370,35913249,35914033,35917484,35927780,35931249,35938697,35940864,35947485	35772079,35801605,35842744,35847434,35858381,35863400,35869551,35871134,35871829,35899648,35913347,35914197,35917662,35927879,35931444,35939108,35941047,35950381	Gene ID= ENSG00000025293.16 TPM= 35.05 Transcript Type= protein_coding
chr20	35772033	35775058	35772033	35775058	+	ENST00000617560.1@PHF20	ENST00000617560.1	protein_coding	35772033,35774488	35772079,35775058	Gene ID= ENSG00000025293.16 TPM= 4.25 Transcript Type= processed_transcript
chr20	35953617	35954626	35953617	35954626	-	ENST00000305978.6@SCAND1	ENST00000305978.6	protein_coding	35954448,35953617	35954626,35954339	Gene ID= ENSG00000171222.10 TPM= 58.42 Transcript Type= protein_coding
chr20	35954707	35955368	35954707	35955368	+	ENST00000614708.1@CNBD2	ENST00000614708.1	protein_coding	35954707	35955368	Gene ID= ENSG00000149646.12 TPM= 1.06 Transcript Type= protein_coding
chr20	36045622	36050960	36045622	36050960	-	ENST00000565493.1@NORAD	ENST00000565493.1	lincRNA	36045622	36050960	Gene ID= ENSG00000260032.1 TPM= 69.04 Transcript Type= lincRNA
chr20	36154678	36230327	36154678	36230327	+	transcript1488.chr20.nic@EPB41L1	transcript1488.chr20.nic	protein_coding	36154678,36173764,36175551,36177952,36178630,36182272,36185117,36187676,36188347,36190277,36190622,36194212,36197859,36209488,36212272,36218876,36219761,36221864,36222278,36229332	36154896,36173954,36175715,36178056,36178672,36182347,36185335,36187763,36188499,36190374,36190797,36194360,36198041,36209898,36212376,36218962,36219844,36221944,36222394,36230327	Gene ID= ENSG00000088367.21 TPM= 6.37 Transcript Type= NA
chr20	36236465	36256933	36236465	36256933	+	ENST00000320849.8@AAR2	ENST00000320849.8	protein_coding	36236465,36239821,36244697,36255578	36236503,36240625,36244926,36256933	Gene ID= ENSG00000131043.11 TPM= 42.49 Transcript Type= protein_coding
chr20	36236485	36256933	36236485	36256933	+	ENST00000373932.3@AAR2	ENST00000373932.3	protein_coding	36236485,36239821,36244697,36255578	36236782,36240625,36244926,36256933	Gene ID= ENSG00000131043.11 TPM= 14.87 Transcript Type= protein_coding
chr20	36461338	36528637	36461338	36528637	+	ENST00000475894.5@DLGAP4	ENST00000475894.5	protein_coding	36461338,36496705,36499588,36500199,36524250,36525851,36526813	36461510,36497066,36499676,36500611,36524341,36526006,36528637	Gene ID= ENSG00000080845.17 TPM= 114.71 Transcript Type= protein_coding
chr20	36461747	36527239	36461747	36527239	+	ENST00000340491.8@DLGAP4	ENST00000340491.8	protein_coding	36461747,36496705,36499588,36500199,36524250,36525851,36526813	36462599,36497066,36499676,36500611,36524341,36526006,36527239	Gene ID= ENSG00000080845.17 TPM= 5.31 Transcript Type= protein_coding
chr20	36476689	36482095	36476689	36482095	-	transcript1507.chr20.nnic@NA	transcript1507.chr20.nnic	NA	36476689	36482095	Gene ID= novel_gene_chr20_1508 TPM= 9.56 Transcript Type= NA
chr20	36541479	36545511	36541479	36545511	+	transcript1520.chr20.nnic@NA	transcript1520.chr20.nnic	NA	36541479	36545511	Gene ID= novel_gene_chr20_1521 TPM= 9.56 Transcript Type= NA
chr20	36541479	36549821	36541479	36549821	+	transcript1513.chr20.nnic@MYL9	transcript1513.chr20.nnic	protein_coding	36541479,36544859,36548127,36549077	36541561,36545068,36548193,36549821	Gene ID= ENSG00000101335.9 TPM= 16.28 Transcript Type= NA
chr20	36546618	36549821	36546618	36549821	+	transcript1519.chr20.nic@MYL9	transcript1519.chr20.nic	protein_coding	36546618,36549077	36548193,36549821	Gene ID= ENSG00000101335.9 TPM= 26.55 Transcript Type= NA
chr20	36541484	36551447	36541484	36551447	+	ENST00000279022.6@MYL9	ENST00000279022.6	protein_coding	36541484,36544859,36548032,36549077	36541561,36545068,36548193,36551447	Gene ID= ENSG00000101335.9 TPM= 39.65 Transcript Type= protein_coding
chr20	36541497	36549825	36541497	36549825	+	ENST00000346786.2@MYL9	ENST00000346786.2	protein_coding	36541497,36544859,36549077	36541561,36545068,36549825	Gene ID= ENSG00000101335.9 TPM= 311.56 Transcript Type= protein_coding
chr20	36573488	36593950	36573488	36593950	+	ENST00000373874.6@TGIF2	ENST00000373874.6	protein_coding	36573488,36578741,36590910	36573652,36578966,36593950	Gene ID= ENSG00000118707.9 TPM= 4.25 Transcript Type= protein_coding
chr20	36573607	36593950	36573607	36593950	+	ENST00000373872.8@TGIF2	ENST00000373872.8	protein_coding	36573607,36578741,36590910	36573745,36578966,36593950	Gene ID= ENSG00000118707.9 TPM= 2.12 Transcript Type= protein_coding
chr20	36605734	36612557	36605734	36612557	+	ENST00000344795.7@C20orf24	ENST00000344795.7	protein_coding	36605734,36607715,36609601,36612010	36606065,36607818,36609730,36612557	Gene ID= ENSG00000101084.17 TPM= 53.11 Transcript Type= protein_coding
chr20	36605822	36612557	36605822	36612557	+	ENST00000342422.3@C20orf24	ENST00000342422.3	protein_coding	36605822,36607715,36612010	36606065,36607818,36612557	Gene ID= ENSG00000101084.17 TPM= 1.06 Transcript Type= protein_coding
chr20	36605789	36612557	36605789	36612557	+	ENST00000483815.5@C20orf24	ENST00000483815.5	protein_coding	36605789,36607715,36607890,36609601,36612010	36606065,36607818,36608000,36609730,36612557	Gene ID= ENSG00000101084.17 TPM= 2.12 Transcript Type= nonsense_mediated_decay
chr20	36651766	36746078	36651766	36746078	-	ENST00000349004.5@NDRG3	ENST00000349004.5	protein_coding	36746045,36721679,36706972,36688679,36687492,36684413,36682518,36680816,36671341,36666289,36665236,36665046,36660337,36656497,36656360,36651766	36746078,36721783,36707007,36688784,36687612,36684475,36682578,36680902,36671397,36666392,36665301,36665097,36660384,36656532,36656411,36653701	Gene ID= ENSG00000101079.20 TPM= 40.71 Transcript Type= protein_coding
chr20	36651766	36746067	36651766	36746067	-	ENST00000359675.6@NDRG3	ENST00000359675.6	protein_coding	36746045,36721679,36688679,36687492,36684413,36682518,36680816,36671341,36666289,36665236,36665046,36660337,36656497,36656360,36651766	36746067,36721783,36688784,36687612,36684475,36682578,36680902,36671397,36666392,36665301,36665097,36660384,36656532,36656411,36653701	Gene ID= ENSG00000101079.20 TPM= 8.85 Transcript Type= protein_coding
chr20	36651766	36746053	36651766	36746053	-	ENST00000373803.6@NDRG3	ENST00000373803.6	protein_coding	36746045,36721679,36706972,36688679,36687492,36684413,36682518,36680816,36671341,36666289,36665236,36665046,36660337,36656497,36656360,36654801,36651766	36746053,36721783,36707007,36688784,36687612,36684475,36682578,36680902,36671397,36666392,36665301,36665097,36660384,36656532,36656411,36654839,36653701	Gene ID= ENSG00000101079.20 TPM= 4.6 Transcript Type= protein_coding
chr20	36751795	36773815	36751795	36773815	-	ENST00000373750.8@DSN1	ENST00000373750.8	protein_coding	36773662,36771425,36770873,36767969,36766769,36762461,36758558,36758087,36755682,36754763,36751795	36773815,36771473,36771193,36768042,36766841,36762548,36758617,36758161,36755829,36754850,36752897	Gene ID= ENSG00000149636.15 TPM= 1.41 Transcript Type= protein_coding
chr20	36751795	36773818	36751795	36773818	-	ENST00000373734.8@DSN1	ENST00000373734.8	protein_coding	36773662,36771425,36767969,36766769,36762461,36758558,36758087,36755682,36754763,36751795	36773818,36771473,36768042,36766841,36762548,36758617,36758161,36755829,36754850,36752897	Gene ID= ENSG00000149636.15 TPM= 1.41 Transcript Type= protein_coding
chr20	36751795	36773760	36751795	36773760	-	ENST00000448110.6@DSN1	ENST00000448110.6	protein_coding	36773662,36770873,36767969,36766769,36762461,36758558,36758087,36755682,36754763,36751795	36773760,36771193,36768042,36766841,36762548,36758617,36758161,36755829,36754850,36752897	Gene ID= ENSG00000149636.15 TPM= 1.41 Transcript Type= protein_coding
chr20	36772293	36773847	36772293	36773847	-	transcript1556.chr20.nnic@NA	transcript1556.chr20.nnic	NA	36772293	36773847	Gene ID= novel_gene_chr20_1557 TPM= 3.19 Transcript Type= NA
chr20	36827358	36863577	36827358	36863577	-	transcript1561.chr20.nic@SOGA1	transcript1561.chr20.nic	protein_coding	36862658,36839217,36827358	36863577,36839441,36829212	Gene ID= ENSG00000149639.14 TPM= 4.25 Transcript Type= NA
chr20	36890229	36951843	36890229	36951843	-	ENST00000262878.4@SAMHD1	ENST00000262878.4	protein_coding	36951436,36946738,36941039,36935029,36930760,36927182,36919364,36916949,36916722,36912461,36911218,36905364,36904157,36898440,36897822,36890229	36951843,36946804,36941111,36935189,36930875,36927252,36919519,36917049,36916830,36912552,36911333,36905503,36904249,36898544,36897959,36893066	Gene ID= ENSG00000101347.8 TPM= 3.19 Transcript Type= protein_coding
chr20	37179038	37241619	37179038	37241619	+	transcript1569.chr20.nic@RPN2	transcript1569.chr20.nic	protein_coding	37179038,37184180,37198397,37199050,37203885,37204767,37207273,37210047,37213760,37223878,37225688,37228550,37229973,37232296,37234020,37236580,37238402,37241303	37179369,37184373,37198492,37199225,37203960,37204901,37207449,37210165,37213865,37223969,37225802,37228744,37230059,37232391,37234095,37236709,37238449,37241619	Gene ID= ENSG00000118705.16 TPM= 110.15 Transcript Type= NA
chr20	37179046	37241623	37179046	37241623	+	ENST00000237530.10@RPN2	ENST00000237530.10	protein_coding	37179046,37184180,37198397,37199050,37203885,37204767,37207273,37210047,37213760,37223878,37225688,37228550,37229973,37232296,37234020,37236580,37241303	37179369,37184373,37198492,37199225,37203960,37204901,37207449,37210165,37213865,37223969,37225802,37228744,37230059,37232391,37234095,37236709,37241623	Gene ID= ENSG00000118705.16 TPM= 53.85 Transcript Type= protein_coding
chr20	37289665	37317260	37289665	37317260	+	transcript1586.chr20.nnic@MANBAL	transcript1586.chr20.nnic	protein_coding	37289665,37297347,37298763,37301208,37316308	37289686,37297534,37298879,37301413,37317260	Gene ID= ENSG00000101363.12 TPM= 6.9 Transcript Type= NA
chr20	37289635	37317260	37289635	37317260	+	transcript1587.chr20.nnic@MANBAL	transcript1587.chr20.nnic	protein_coding	37289635,37298763,37301208,37316308	37289686,37298879,37301413,37317260	Gene ID= ENSG00000101363.12 TPM= 13.28 Transcript Type= NA
chr20	37289638	37317260	37289638	37317260	+	ENST00000373606.7@MANBAL	ENST00000373606.7	protein_coding	37289638,37301208,37316308	37289686,37301413,37317260	Gene ID= ENSG00000101363.12 TPM= 8.5 Transcript Type= protein_coding
chr20	37491918	37495066	37491918	37495066	-	transcript1597.chr20.nnic@NA	transcript1597.chr20.nnic	NA	37491918	37495066	Gene ID= novel_gene_chr20_1598 TPM= 2.12 Transcript Type= NA
chr20	37517417	37527931	37517417	37527931	-	ENST00000373537.6@BLCAP	ENST00000373537.6	protein_coding	37527793,37517417	37527931,37519350	Gene ID= ENSG00000166619.12 TPM= 265.54 Transcript Type= protein_coding
chr20	37694006	37872129	37694006	37872129	+	ENST00000361383.10@CTNNBL1	ENST00000361383.10	protein_coding	37694006,37732879,37737378,37746468,37757559,37765197,37767953,37777345,37777654,37779187,37802867,37840102,37842339,37859899,37860272,37871925	37694152,37733067,37737484,37746607,37757656,37765290,37768044,37777417,37777712,37779335,37803048,37840199,37842419,37860036,37860344,37872129	Gene ID= ENSG00000132792.18 TPM= 71.16 Transcript Type= protein_coding
chr20	37903104	37945350	37903104	37945350	+	ENST00000373461.8@VSTM2L	ENST00000373461.8	protein_coding	37903104,37931635,37933539,37943981	37903471,37931804,37933589,37945350	Gene ID= ENSG00000132821.11 TPM= 27.62 Transcript Type= protein_coding
chr20	37983007	38033461	37983007	38033461	-	ENST00000373448.6@TTI1	ENST00000373448.6	protein_coding	38033404,38019005,38011515,38006197,38002628,37999188,37996749,37996375,37983007	38033461,38019144,38013857,38006397,38002776,37999328,37996953,37996462,37983639	Gene ID= ENSG00000101407.12 TPM= 3.37 Transcript Type= protein_coding
chr20	37983022	38033464	37983022	38033464	-	transcript1612.chr20.nnic@TTI1	transcript1612.chr20.nnic	protein_coding	38033404,38006197,38002628,37999188,37996749,37996375,37983022	38033464,38006397,38002776,37999328,37996953,37996462,37983639	Gene ID= ENSG00000101407.12 TPM= 6.02 Transcript Type= NA
chr20	37983007	38033468	37983007	38033468	-	ENST00000373447.7@TTI1	ENST00000373447.7	protein_coding	38033404,38011515,38006197,38002628,37999188,37996749,37996375,37983007	38033468,38013857,38006397,38002776,37999328,37996953,37996462,37983639	Gene ID= ENSG00000101407.12 TPM= 7.62 Transcript Type= protein_coding
chr20	38033546	38092366	38033546	38092366	+	ENST00000373433.8@RPRD1B	ENST00000373433.8	protein_coding	38033546,38040435,38048348,38057532,38059394,38066081,38089726	38034098,38040564,38048481,38057644,38059520,38066256,38092366	Gene ID= ENSG00000101413.11 TPM= 37.18 Transcript Type= protein_coding
chr20	38085339	38092361	38085339	38092361	+	transcript1616.chr20.nnic@RPRD1B	transcript1616.chr20.nnic	protein_coding	38085339,38086697,38089726	38085646,38086846,38092361	Gene ID= ENSG00000101413.11 TPM= 8.5 Transcript Type= NA
chr20	38127387	38165372	38127387	38165372	-	ENST00000361475.6@TGM2	ENST00000361475.6	protein_coding	38165189,38161420,38155847,38150939,38147961,38146717,38142064,38141282,38139412,38138113,38132340,38131093,38127387	38165372,38161599,38156089,38151057,38148089,38146894,38142199,38141385,38139654,38138385,38132500,38131229,38130369	Gene ID= ENSG00000198959.11 TPM= 175.22 Transcript Type= protein_coding
chr20	38230473	38232644	38230473	38232644	+	transcript1655.chr20.nnic@NA	transcript1655.chr20.nnic	NA	38230473	38232644	Gene ID= novel_gene_chr20_1656 TPM= 2.12 Transcript Type= NA
chr20	38420593	38435356	38420593	38435356	-	transcript1657.chr20.nnic@SNHG17	transcript1657.chr20.nnic	processed_transcript	38435027,38434504,38431041,38426419,38422087,38421006,38420593	38435356,38434626,38431112,38426503,38422241,38421098,38420900	Gene ID= ENSG00000196756.11 TPM= 2.12 Transcript Type= NA
chr20	38420593	38435355	38420593	38435355	-	transcript1659.chr20.nic@SNHG17	transcript1659.chr20.nic	processed_transcript	38435197,38434504,38431041,38426419,38421006,38420593	38435355,38434626,38431112,38426503,38421098,38420900	Gene ID= ENSG00000196756.11 TPM= 2.12 Transcript Type= NA
chr20	38446691	38450921	38446691	38450921	+	ENST00000421599.5@SNHG11	ENST00000421599.5	processed_transcript	38446691,38447466,38448666,38450336,38450533	38447012,38447623,38448730,38450447,38450921	Gene ID= ENSG00000174365.19 TPM= 1.59 Transcript Type= lincRNA
chr20	38446724	38450921	38446724	38450921	+	ENST00000432153.5@SNHG11	ENST00000432153.5	processed_transcript	38446724,38447466,38447930,38448662,38450336,38450533	38447012,38447623,38448093,38448730,38450447,38450921	Gene ID= ENSG00000174365.19 TPM= 2.66 Transcript Type= lincRNA
chr20	38472816	38578859	38472816	38578859	+	ENST00000397042.7@RALGAPB	ENST00000397042.7	protein_coding	38472816,38488403,38492930,38497353,38499447,38509077,38516192,38517506,38517784,38521497,38524778,38525404,38525895,38531167,38532730,38535086,38539776,38541041,38546243,38548689,38551071,38553867,38558295,38562532,38565356,38567096,38569888,38570769,38574150,38574774	38473069,38488618,38493132,38497516,38499633,38509208,38516370,38517654,38518000,38521698,38524945,38525518,38526042,38531231,38532859,38535207,38539958,38541192,38546430,38548795,38551223,38554076,38558453,38562697,38565478,38567232,38569996,38570847,38574298,38578859	Gene ID= ENSG00000170471.14 TPM= 6.37 Transcript Type= protein_coding
chr20	38748442	38772520	38748442	38772520	+	ENST00000243903.5@ACTR5	ENST00000243903.5	protein_coding	38748442,38750010,38752131,38754957,38755857,38765402,38766238,38767464,38771559	38748853,38750239,38752300,38755174,38756039,38765518,38766377,38767596,38772520	Gene ID= ENSG00000101442.9 TPM= 2.12 Transcript Type= protein_coding
chr20	38805705	38841381	38805705	38841381	+	transcript1673.chr20.nic@PPP1R16B	transcript1673.chr20.nic	protein_coding	38805705,38835825	38805792,38841381	Gene ID= ENSG00000101445.9 TPM= 4.25 Transcript Type= NA
chr20	38962360	39039721	38962360	39039721	+	transcript1677.chr20.nic@DHX35	transcript1677.chr20.nic	protein_coding	38962360,38969081,38972559,38983699,38988813,38991454,38992356,38994821,39001730,39002772,39003749,39006146,39010280,39014880,39018804,39021841,39025230,39028418,39030704,39034206,39038499	38962407,38969214,38972651,38983776,38988917,38991515,38992425,38994880,39001842,39002868,39003907,39006356,39010404,39014934,39018899,39021935,39025359,39028499,39030775,39034317,39039721	Gene ID= ENSG00000101452.14 TPM= 3.19 Transcript Type= NA
chr20	38962335	39039723	38962335	39039723	+	ENST00000252011.7@DHX35	ENST00000252011.7	protein_coding	38962335,38969081,38972559,38983699,38988813,38991454,38992356,38994821,39001730,39002772,39003749,39006146,39010280,39014880,39018804,39021841,39023690,39025230,39028418,39030704,39034206,39038499	38962407,38969214,38972651,38983776,38988917,38991515,38992425,38994880,39001842,39002868,39003907,39006356,39010404,39014934,39018899,39021935,39023767,39025359,39028499,39030775,39034317,39039723	Gene ID= ENSG00000101452.14 TPM= 7.44 Transcript Type= protein_coding
chr20	40685848	40689240	40685848	40689240	-	ENST00000373313.2@MAFB	ENST00000373313.2	protein_coding	40685848	40689240	Gene ID= ENSG00000204103.3 TPM= 5.31 Transcript Type= protein_coding
chr20	41028790	41081206	41028790	41081206	+	transcript1692.chr20.nic@TOP1	transcript1692.chr20.nic	protein_coding	41028790,41029431,41061394,41076171,41077582,41080085,41081165	41029100,41029455,41061490,41076294,41077637,41080180,41081206	Gene ID= ENSG00000198900.5 TPM= 5.31 Transcript Type= NA
chr20	41162230	41164973	41162230	41164973	-	transcript1699.chr20.nnic@NA	transcript1699.chr20.nnic	NA	41163713,41162635,41162230	41164973,41163479,41162530	Gene ID= novel_gene_chr20_1700 TPM= 9.56 Transcript Type= NA
chr20	41184827	41317709	41184827	41317709	-	transcript1703.chr20.nnic@ZHX3	transcript1703.chr20.nnic	protein_coding	41317509,41268990,41267463,41202057,41184827	41317709,41269083,41267612,41205066,41185201	Gene ID= ENSG00000174306.21 TPM= 6.37 Transcript Type= NA
chr20	41402101	41618494	41402101	41618494	-	ENST00000373233.7@CHD6	ENST00000373233.7	protein_coding	41618340,41551305,41533050,41514805,41512846,41499295,41498168,41497384,41493858,41493538,41491698,41489778,41488428,41487665,41484352,41483309,41473322,41457264,41455800,41454626,41452740,41451826,41450946,41447882,41445665,41440000,41437274,41426093,41425178,41423492,41420508,41417198,41416588,41415186,41413324,41412144,41402101	41618494,41551360,41533570,41514952,41512995,41499357,41498226,41497501,41493944,41493672,41491819,41490021,41488604,41487808,41484607,41483519,41473517,41457428,41455979,41454736,41452942,41452025,41451105,41447971,41445768,41440129,41437334,41426153,41425394,41423700,41422079,41417349,41416794,41415638,41413515,41412263,41405489	Gene ID= ENSG00000124177.14 TPM= 11.68 Transcript Type= protein_coding
chr20	41514920	41618369	41514920	41618369	-	transcript1712.chr20.nnic@CHD6	transcript1712.chr20.nnic	protein_coding	41618340,41551305,41533915,41533050,41514920	41618369,41551360,41533984,41533570,41514952	Gene ID= ENSG00000124177.14 TPM= 2.12 Transcript Type= NA
chr20	41604040	41607780	41604040	41607780	+	transcript1716.chr20.nnic@NA	transcript1716.chr20.nnic	NA	41604040	41607780	Gene ID= novel_gene_chr20_1717 TPM= 3.19 Transcript Type= NA
chr20	43461475	43463600	43461475	43463600	+	transcript1722.chr20.nnic@NA	transcript1722.chr20.nnic	NA	43461475	43463600	Gene ID= novel_gene_chr20_1723 TPM= 3.19 Transcript Type= NA
chr20	43530969	43541189	43530969	43541189	+	ENST00000373133.5@L3MBTL1	ENST00000373133.5	protein_coding	43530969,43533342,43534008,43534284,43534828,43535837,43536097,43536409,43540151,43540753	43532924,43533418,43534093,43534394,43534942,43535936,43536294,43536458,43540308,43541189	Gene ID= ENSG00000185513.14 TPM= 1.06 Transcript Type= retained_intron
chr20	43590931	43647296	43590931	43647296	+	ENST00000373030.7@IFT52	ENST00000373030.7	protein_coding	43590931,43594693,43596435,43603760,43604183,43605002,43613850,43618940,43620857,43623891,43635926,43637145,43642479,43646936	43591054,43594817,43596522,43603889,43604258,43605073,43613976,43619026,43620925,43624045,43636013,43637253,43642624,43647296	Gene ID= ENSG00000101052.12 TPM= 9.56 Transcript Type= protein_coding
chr20	43590990	43647222	43590990	43647222	+	ENST00000373039.4@IFT52	ENST00000373039.4	protein_coding	43590990,43594693,43596435,43603760,43604183,43605002,43613850,43618940,43620857,43623891,43635926,43637145,43642479,43646936	43591029,43594817,43596522,43603889,43604258,43605073,43613976,43619026,43620925,43624045,43636013,43637253,43642624,43647222	Gene ID= ENSG00000101052.12 TPM= 12.75 Transcript Type= protein_coding
chr20	43726164	43726998	43726164	43726998	-	ENST00000373003.1@GTSF1L	ENST00000373003.1	protein_coding	43726164	43726998	Gene ID= ENSG00000124196.5 TPM= 1.06 Transcript Type= protein_coding
chr20	44108388	44110892	44108388	44110892	+	transcript1755.chr20.nnic@NA	transcript1755.chr20.nnic	NA	44108388	44110892	Gene ID= novel_gene_chr20_1756 TPM= 5.31 Transcript Type= NA
chr20	44111695	44187578	44111695	44187578	-	ENST00000372980.3@JPH2	ENST00000372980.3	protein_coding	44186327,44159618,44118505,44115665,44114782,44111695	44187578,44160407,44118623,44116386,44114876,44113503	Gene ID= ENSG00000149596.6 TPM= 324.49 Transcript Type= protein_coding
chr20	44180341	44187165	44180341	44187165	-	transcript1749.chr20.nnic@JPH2	transcript1749.chr20.nnic	protein_coding	44186327,44180341	44187165,44181570	Gene ID= ENSG00000149596.6 TPM= 3.19 Transcript Type= NA
chr20	44176817	44187093	44176817	44187093	-	ENST00000342272.3@JPH2	ENST00000342272.3	protein_coding	44186327,44176817	44187093,44177972	Gene ID= ENSG00000149596.6 TPM= 1.06 Transcript Type= protein_coding
chr20	44152091	44156047	44152091	44156047	+	transcript1751.chr20.nnic@NA	transcript1751.chr20.nnic	NA	44152091	44156047	Gene ID= novel_gene_chr20_1752 TPM= 4.25 Transcript Type= NA
chr20	44168333	44172257	44168333	44172257	-	transcript1763.chr20.nnic@NA	transcript1763.chr20.nnic	NA	44168333	44172257	Gene ID= novel_gene_chr20_1764 TPM= 4.25 Transcript Type= NA
chr20	44170743	44174393	44170743	44174393	-	transcript1767.chr20.nnic@NA	transcript1767.chr20.nnic	NA	44170743	44174393	Gene ID= novel_gene_chr20_1768 TPM= 3.19 Transcript Type= NA
chr20	44174181	44176636	44174181	44176636	+	transcript1753.chr20.nnic@NA	transcript1753.chr20.nnic	NA	44174181	44176636	Gene ID= novel_gene_chr20_1754 TPM= 11.68 Transcript Type= NA
chr20	44184304	44186499	44184304	44186499	-	transcript1769.chr20.nnic@NA	transcript1769.chr20.nnic	NA	44184304	44186499	Gene ID= novel_gene_chr20_1770 TPM= 2.12 Transcript Type= NA
chr20	44196496	44210791	44196496	44210791	-	ENST00000255174.2@OSER1	ENST00000255174.2	protein_coding	44210696,44206881,44202961,44196496	44210791,44206998,44203074,44197739	Gene ID= ENSG00000132823.10 TPM= 37.18 Transcript Type= protein_coding
chr20	44210960	44226027	44210960	44226027	+	ENST00000439943.5@OSER1-AS1	ENST00000439943.5	lincRNA	44210960,44214888,44224821	44211077,44215003,44226027	Gene ID= ENSG00000223891.5 TPM= 1.59 Transcript Type= lincRNA
chr20	44211082	44226027	44211082	44226027	+	ENST00000442383.1@OSER1-AS1	ENST00000442383.1	lincRNA	44211082,44224821	44211356,44226027	Gene ID= ENSG00000223891.5 TPM= 1.59 Transcript Type= lincRNA
chr20	44220678	44223693	44220678	44223693	+	transcript1779.chr20.nnic@NA	transcript1779.chr20.nnic	NA	44220678	44223693	Gene ID= novel_gene_chr20_1780 TPM= 3.19 Transcript Type= NA
chr20	44302838	44311176	44302838	44311176	-	transcript1785.chr20.nnic@FITM2	transcript1785.chr20.nnic	protein_coding	44310976,44306223,44302838	44311176,44307240,44305587	Gene ID= ENSG00000197296.5 TPM= 3.19 Transcript Type= NA
chr20	44302840	44311241	44302840	44311241	-	transcript1788.chr20.nnic@FITM2	transcript1788.chr20.nnic	protein_coding	44310976,44306251,44302840	44311241,44307240,44305580	Gene ID= ENSG00000197296.5 TPM= 25.49 Transcript Type= NA
chr20	44302840	44311241	44302840	44311241	-	transcript1789.chr20.nnic@FITM2	transcript1789.chr20.nnic	protein_coding	44310976,44306166,44302840	44311241,44307240,44305582	Gene ID= ENSG00000197296.5 TPM= 26.55 Transcript Type= NA
chr20	44302843	44311241	44302843	44311241	-	transcript1794.chr20.nnic@FITM2	transcript1794.chr20.nnic	protein_coding	44310976,44306670,44302843	44311241,44307240,44305580	Gene ID= ENSG00000197296.5 TPM= 5.31 Transcript Type= NA
chr20	44302838	44311169	44302838	44311169	-	ENST00000396825.3@FITM2	ENST00000396825.3	protein_coding	44310976,44302838	44311169,44307240	Gene ID= ENSG00000197296.5 TPM= 63.73 Transcript Type= protein_coding
chr20	44309171	44311202	44309171	44311202	-	transcript1803.chr20.nnic@NA	transcript1803.chr20.nnic	NA	44309171	44311202	Gene ID= novel_gene_chr20_1804 TPM= 3.19 Transcript Type= NA
chr20	44475886	44494603	44475886	44494603	+	ENST00000262605.8@TTPAL	ENST00000262605.8	protein_coding	44475886,44479985,44484337,44486596,44489263	44475991,44480444,44484530,44486706,44494603	Gene ID= ENSG00000124120.10 TPM= 4.25 Transcript Type= protein_coding
chr20	44497431	44522109	44497431	44522109	-	ENST00000342374.4@SERINC3	ENST00000342374.4	protein_coding	44521913,44513879,44512801,44511289,44509891,44506827,44504801,44503815,44501073,44497431	44522109,44514040,44512994,44511368,44510028,44506996,44504891,44503995,44501300,44500434	Gene ID= ENSG00000132824.13 TPM= 29.74 Transcript Type= protein_coding
chr20	44496224	44522085	44496224	44522085	-	ENST00000255175.5@SERINC3	ENST00000255175.5	protein_coding	44521913,44513879,44512801,44511289,44509891,44506827,44504801,44503815,44501073,44500258,44496224	44522085,44514040,44512994,44511368,44510028,44506996,44504891,44503995,44501300,44500434,44496355	Gene ID= ENSG00000132824.13 TPM= 4.25 Transcript Type= protein_coding
chr20	44531785	44619037	44531785	44619037	+	ENST00000372891.7@PKIG	ENST00000372891.7	protein_coding	44531785,44582585,44585100,44589797,44614534,44618285	44531978,44582731,44585204,44589866,44614707,44619037	Gene ID= ENSG00000168734.13 TPM= 32.13 Transcript Type= protein_coding
chr20	44531785	44619037	44531785	44619037	+	ENST00000372892.7@PKIG	ENST00000372892.7	protein_coding	44531785,44582585,44589797,44614534,44618285	44531978,44582731,44589866,44614707,44619037	Gene ID= ENSG00000168734.13 TPM= 147.91 Transcript Type= protein_coding
chr20	44531785	44619037	44531785	44619037	+	ENST00000372894.7@PKIG	ENST00000372894.7	protein_coding	44531785,44589797,44614534,44618285	44531978,44589866,44614707,44619037	Gene ID= ENSG00000168734.13 TPM= 76.39 Transcript Type= protein_coding
chr20	44582549	44619037	44582549	44619037	+	ENST00000372886.5@PKIG	ENST00000372886.5	protein_coding	44582549,44589797,44614534,44618285	44582731,44589866,44614707,44619037	Gene ID= ENSG00000168734.13 TPM= 169.95 Transcript Type= protein_coding
chr20	44619522	44651742	44619522	44651742	-	ENST00000372874.8@ADA	ENST00000372874.8	protein_coding	44651575,44636227,44629047,44626456,44625569,44624202,44623007,44622829,44622588,44621018,44620299,44619522	44651742,44636288,44629169,44626599,44625684,44624329,44623078,44622930,44622652,44621147,44620401,44619847	Gene ID= ENSG00000196839.12 TPM= 6.37 Transcript Type= protein_coding
chr20	44695076	44696084	44695076	44696084	-	ENST00000419931.1@KCNK15-AS1	ENST00000419931.1	antisense_RNA	44696003,44695076	44696084,44695507	Gene ID= ENSG00000244558.5 TPM= 1.06 Transcript Type= antisense_RNA
chr20	44714844	44727811	44714844	44727811	+	ENST00000372868.6@WISP2	ENST00000372868.6	protein_coding	44714844,44715366,44719897,44724738,44727087	44715161,44715450,44720113,44724992,44727811	Gene ID= ENSG00000064205.10 TPM= 36.11 Transcript Type= protein_coding
chr20	44745780	44752313	44745780	44752313	+	ENST00000372861.4@KCNK15	ENST00000372861.4	protein_coding	44745780,44750129	44746193,44752313	Gene ID= ENSG00000124249.6 TPM= 4.25 Transcript Type= protein_coding
chr20	44885676	44908532	44885676	44908532	+	ENST00000353703.8@YWHAB	ENST00000353703.8	protein_coding	44885676,44901531,44903993,44904968,44906001,44906382	44885886,44901833,44904116,44905131,44906096,44908532	Gene ID= ENSG00000166913.12 TPM= 38.24 Transcript Type= protein_coding
chr20	44931562	44939317	44931562	44939317	+	ENST00000372824.5@PABPC1L	ENST00000372824.5	protein_coding	44931562,44935391,44936637,44938061,44938674,44939126	44933185,44935497,44936730,44938191,44938748,44939317	Gene ID= ENSG00000101104.12 TPM= 1.06 Transcript Type= protein_coding
chr20	44942130	44960486	44942130	44960486	-	ENST00000372813.3@TOMM34	ENST00000372813.3	protein_coding	44960207,44956386,44955068,44951833,44948730,44943453,44942130	44960486,44956485,44955220,44952002,44948877,44943579,44943213	Gene ID= ENSG00000025772.7 TPM= 6.37 Transcript Type= protein_coding
chr20	44966474	45079959	44966474	45079959	+	ENST00000372806.7@STK4	ENST00000372806.7	protein_coding	44966474,44972078,44978443,44981829,44987132,44995090,44997169,45000392,45001167,45024973,45075018	44966603,44972158,44978571,44981943,44987296,44995257,44997306,45000520,45001353,45025130,45079959	Gene ID= ENSG00000101109.11 TPM= 4.25 Transcript Type= protein_coding
chr20	44966515	44972920	44966515	44972920	+	ENST00000488618.1@STK4	ENST00000488618.1	protein_coding	44966515,44972078	44966603,44972920	Gene ID= ENSG00000101109.11 TPM= 1.06 Transcript Type= processed_transcript
chr20	45325288	45348424	45325288	45348424	-	ENST00000372733.3@SDC4	ENST00000372733.3	protein_coding	45348325,45335782,45333023,45330366,45325288	45348424,45335920,45333069,45330564,45327415	Gene ID= ENSG00000124145.6 TPM= 173.13 Transcript Type= protein_coding
chr20	45363028	45369215	45363028	45369215	+	ENST00000243918.9@SYS1	ENST00000243918.9	protein_coding	45363028,45363529,45365619,45366875	45363315,45363693,45365686,45369215	Gene ID= ENSG00000204070.9 TPM= 22.31 Transcript Type= protein_coding
chr20	45369598	45371917	45369598	45371917	-	transcript1909.chr20.nnic@NA	transcript1909.chr20.nnic	NA	45369598	45371917	Gene ID= novel_gene_chr20_1910 TPM= 6.37 Transcript Type= NA
chr20	45406619	45410610	45406619	45410610	+	ENST00000360981.8@DBNDD2	ENST00000360981.8	protein_coding	45406619,45408460,45408801,45409932	45406732,45408606,45408938,45410610	Gene ID= ENSG00000244274.7 TPM= 179.34 Transcript Type= protein_coding
chr20	45406057	45410610	45406057	45410610	+	ENST00000372723.7@DBNDD2	ENST00000372723.7	protein_coding	45406057,45408460,45408801,45409932	45406210,45408606,45408938,45410610	Gene ID= ENSG00000244274.7 TPM= 15.76 Transcript Type= protein_coding
chr20	45406071	45410610	45406071	45410610	+	ENST00000372722.7@DBNDD2	ENST00000372722.7	protein_coding	45406071,45408460,45408801,45409932	45406210,45408606,45409036,45410610	Gene ID= ENSG00000244274.7 TPM= 2.87 Transcript Type= protein_coding
chr20	45406588	45410610	45406588	45410610	+	ENST00000372717.5@DBNDD2	ENST00000372717.5	protein_coding	45406588,45408460,45408801,45409932	45406732,45408606,45409036,45410610	Gene ID= ENSG00000244274.7 TPM= 7.12 Transcript Type= protein_coding
chr20	45407207	45410610	45407207	45410610	+	ENST00000372712.6@DBNDD2	ENST00000372712.6	protein_coding	45407207,45408460,45408801,45409932	45407779,45408606,45408938,45410610	Gene ID= ENSG00000244274.7 TPM= 15.76 Transcript Type= protein_coding
chr20	45408007	45410610	45408007	45410610	+	ENST00000372710.3@DBNDD2	ENST00000372710.3	protein_coding	45408007,45408801,45409932	45408606,45408938,45410610	Gene ID= ENSG00000244274.7 TPM= 69.93 Transcript Type= protein_coding
chr20	45408289	45410610	45408289	45410610	+	ENST00000443296.1@DBNDD2	ENST00000443296.1	protein_coding	45408289,45408801,45409932	45408606,45409036,45410610	Gene ID= ENSG00000244274.7 TPM= 8.18 Transcript Type= protein_coding
chr20	45416067	45426244	45416067	45426244	+	ENST00000279036.11@PIGT	ENST00000279036.11	protein_coding	45416067,45416517,45418852,45419295,45419504,45420136,45420332,45420528,45421383,45424216,45424496,45425574	45416343,45416694,45418979,45419395,45419590,45420223,45420429,45420693,45421583,45424381,45424579,45426244	Gene ID= ENSG00000124155.17 TPM= 183.49 Transcript Type= protein_coding
chr20	45416141	45426240	45416141	45426240	+	ENST00000640986.1@PIGT	ENST00000640986.1	protein_coding	45416141,45416517,45418852,45419295,45419504,45420136,45420332,45420508,45421383,45424216,45424496,45425574	45416343,45416694,45418979,45419395,45419590,45420223,45420429,45420693,45421583,45424381,45424579,45426240	Gene ID= ENSG00000124155.17 TPM= 16.2 Transcript Type= nonsense_mediated_decay
chr20	45416141	45426200	45416141	45426200	+	ENST00000639932.1@PIGT	ENST00000639932.1	protein_coding	45416141,45416517,45418852,45419295,45419473,45420136,45420332,45420528,45421383,45424216,45424496,45425574	45416343,45416694,45418979,45419395,45419590,45420223,45420429,45420693,45421583,45424381,45424579,45426200	Gene ID= ENSG00000124155.17 TPM= 1.33 Transcript Type= nonsense_mediated_decay
chr20	45416123	45426206	45416123	45426206	+	ENST00000640364.1@PIGT	ENST00000640364.1	protein_coding	45416123,45416517,45418852,45419295,45419504,45420136,45420332,45420528,45424216,45424496,45425574	45416343,45416694,45418979,45419395,45419590,45420223,45420429,45421583,45424381,45424579,45426206	Gene ID= ENSG00000124155.17 TPM= 1.33 Transcript Type= retained_intron
chr20	45416137	45426241	45416137	45426241	+	ENST00000372689.9@PIGT	ENST00000372689.9	protein_coding	45416137,45416517,45418852,45419295,45419504,45420136,45420332,45420528,45424216,45424496,45425574	45416343,45416694,45418979,45419395,45419590,45420223,45420429,45420693,45424381,45424579,45426241	Gene ID= ENSG00000124155.17 TPM= 23.9 Transcript Type= protein_coding
chr20	45416123	45426196	45416123	45426196	+	ENST00000638978.1@PIGT	ENST00000638978.1	protein_coding	45416123,45416517,45418852,45419295,45419504,45420136,45420332,45420528,45421383,45424216,45424496,45425574	45416343,45416694,45418979,45419395,45419590,45420223,45420429,45420693,45421533,45424381,45424579,45426196	Gene ID= ENSG00000124155.17 TPM= 2.12 Transcript Type= nonsense_mediated_decay
chr20	45791937	45811427	45791937	45811427	+	ENST00000372622.7@DNTTIP1	ENST00000372622.7	protein_coding	45791937,45792677,45793921,45795345,45801074,45801402,45801999,45803333,45805146,45805306,45809114,45810885,45811057	45792109,45792747,45794017,45795443,45801142,45801458,45802057,45803378,45805204,45805366,45809185,45810940,45811427	Gene ID= ENSG00000101457.12 TPM= 67.98 Transcript Type= protein_coding
chr20	45833823	45841723	45833823	45841723	+	transcript1944.chr20.nic@SNX21	transcript1944.chr20.nic	protein_coding	45833823,45834201,45834959,45840639	45833940,45834468,45835109,45841723	Gene ID= ENSG00000124104.18 TPM= 2.47 Transcript Type= NA
chr20	45833895	45841730	45833895	45841730	+	ENST00000372542.5@SNX21	ENST00000372542.5	protein_coding	45833895,45834959,45840639	45834468,45835116,45841730	Gene ID= ENSG00000124104.18 TPM= 1.41 Transcript Type= protein_coding
chr20	45833852	45841730	45833852	45841730	+	ENST00000491381.5@SNX21	ENST00000491381.5	protein_coding	45833852,45834201,45834959,45840639	45833940,45834468,45835116,45841730	Gene ID= ENSG00000124104.18 TPM= 3.54 Transcript Type= protein_coding
chr20	45841721	45857406	45841721	45857406	-	ENST00000217455.8@ACOT8	ENST00000217455.8	protein_coding	45857188,45855159,45848450,45844263,45843527,45841721	45857406,45855292,45848675,45844420,45843721,45841956	Gene ID= ENSG00000101473.16 TPM= 47.27 Transcript Type= protein_coding
chr20	45854074	45857408	45854074	45857408	-	transcript1957.chr20.nic@ACOT8	transcript1957.chr20.nic	protein_coding	45857188,45854074	45857408,45855292	Gene ID= ENSG00000101473.16 TPM= 2.12 Transcript Type= NA
chr20	45841726	45857389	45841726	45857389	-	ENST00000461272.5@ACOT8	ENST00000461272.5	protein_coding	45857188,45855159,45848450,45844263,45843527,45841726	45857389,45855292,45848675,45844420,45843772,45841956	Gene ID= ENSG00000101473.16 TPM= 4.78 Transcript Type= nonsense_mediated_decay
chr20	45841738	45857402	45841738	45857402	-	ENST00000488679.5@ACOT8	ENST00000488679.5	protein_coding	45857188,45848450,45844263,45843527,45841738	45857402,45848675,45844420,45843721,45841956	Gene ID= ENSG00000101473.16 TPM= 2.12 Transcript Type= nonsense_mediated_decay
chr20	45842023	45857371	45842023	45857371	-	ENST00000493118.5@ACOT8	ENST00000493118.5	protein_coding	45857188,45848450,45842023	45857371,45848675,45844420	Gene ID= ENSG00000101473.16 TPM= 1.06 Transcript Type= retained_intron
chr20	45857617	45879122	45857617	45879122	+	ENST00000255152.2@ZSWIM3	ENST00000255152.2	protein_coding	45857617,45876714	45857980,45879122	Gene ID= ENSG00000132801.6 TPM= 3.19 Transcript Type= protein_coding
chr20	45888634	45891287	45888634	45891287	-	ENST00000372518.4@NEURL2	ENST00000372518.4	protein_coding	45890250,45888634	45891287,45888873	Gene ID= ENSG00000124257.6 TPM= 15.93 Transcript Type= protein_coding
chr20	45890144	45898820	45890144	45898820	+	ENST00000606788.5@CTSA	ENST00000606788.5	protein_coding	45890144,45891569,45891916,45892273,45892398,45892725,45893220,45893988,45894650,45894823,45894994,45896965,45897717,45898005,45898367	45891379,45891762,45892027,45892323,45892484,45892887,45893311,45894072,45894741,45894901,45895133,45897040,45897806,45898109,45898820	Gene ID= ENSG00000064601.16 TPM= 136.31 Transcript Type= nonsense_mediated_decay
chr20	45891341	45898820	45891341	45898820	+	ENST00000191018.9@CTSA	ENST00000191018.9	protein_coding	45891341,45891569,45891916,45892273,45892398,45892725,45893220,45893988,45894650,45894823,45894994,45896965,45897717,45898005,45898367	45891425,45891762,45892027,45892323,45892484,45892880,45893311,45894072,45894741,45894901,45895133,45897040,45897806,45898109,45898820	Gene ID= ENSG00000064601.16 TPM= 54.52 Transcript Type= protein_coding
chr20	45891322	45898820	45891322	45898820	+	ENST00000354880.9@CTSA	ENST00000354880.9	protein_coding	45891322,45891569,45891916,45892398,45892725,45893220,45893988,45894650,45894823,45894994,45896965,45897717,45898005,45898367	45891379,45891762,45892027,45892484,45892880,45893311,45894072,45894741,45894901,45895133,45897040,45897806,45898109,45898820	Gene ID= ENSG00000064601.16 TPM= 33.28 Transcript Type= protein_coding
chr20	45898760	45910937	45898760	45910937	-	ENST00000372420.5@PLTP	ENST00000372420.5	protein_coding	45910871,45909942,45909516,45907841,45907692,45906268,45904942,45904800,45902440,45902267,45899836,45899622,45899462,45898760	45910937,45910070,45909671,45907904,45907755,45906359,45905118,45904859,45902604,45902334,45899878,45899685,45899538,45899063	Gene ID= ENSG00000100979.14 TPM= 4.25 Transcript Type= protein_coding
chr20	45898760	45912147	45898760	45912147	-	ENST00000372431.7@PLTP	ENST00000372431.7	protein_coding	45912079,45911353,45911152,45909942,45909516,45907841,45907692,45906268,45904942,45904800,45902440,45902267,45899836,45899622,45899462,45898760	45912147,45911463,45911251,45910070,45909671,45907904,45907755,45906359,45905118,45904859,45902604,45902334,45899878,45899685,45899538,45899063	Gene ID= ENSG00000100979.14 TPM= 24.43 Transcript Type= protein_coding
chr20	45934628	45948023	45934628	45948023	+	ENST00000372409.7@PCIF1	ENST00000372409.7	protein_coding	45934628,45937418,45938981,45939215,45940475,45940809,45941053,45943097,45943340,45943666,45944868,45945711,45946029,45946200,45947073,45947263,45947524	45934804,45937585,45939123,45939339,45940612,45940939,45941207,45943244,45943423,45943765,45945030,45945883,45946115,45946384,45947166,45947438,45948023	Gene ID= ENSG00000100982.11 TPM= 62.32 Transcript Type= protein_coding
chr20	45934678	45948023	45934678	45948023	+	transcript1991.chr20.nnic@PCIF1	transcript1991.chr20.nnic	protein_coding	45934678,45937418,45938981,45939215,45940475,45940809,45941053,45943097,45943340,45943666,45944868,45945711,45946029,45947073,45947263,45947524	45934804,45937585,45939123,45939339,45940612,45940939,45941207,45943244,45943423,45943765,45945030,45945883,45946115,45947166,45947438,45948023	Gene ID= ENSG00000100982.11 TPM= 2.84 Transcript Type= NA
chr20	45934678	45948023	45934678	45948023	+	transcript1992.chr20.nnic@PCIF1	transcript1992.chr20.nnic	protein_coding	45934678,45937418,45938981,45939215,45940809,45941053,45943097,45943340,45943666,45944868,45945711,45946029,45946200,45947073,45947263,45947524	45934804,45937585,45939123,45939339,45940939,45941207,45943244,45943423,45943765,45945030,45945883,45946115,45946384,45947166,45947438,45948023	Gene ID= ENSG00000100982.11 TPM= 11.33 Transcript Type= NA
chr20	45934733	45937972	45934733	45937972	+	ENST00000616084.1@PCIF1	ENST00000616084.1	protein_coding	45934733,45937418	45934804,45937972	Gene ID= ENSG00000100982.11 TPM= 1.06 Transcript Type= processed_transcript
chr20	46008908	46016561	46008908	46016561	+	ENST00000372330.3@MMP9	ENST00000372330.3	protein_coding	46008908,46009866,46010483,46010922,46011143,46011574,46012137,46012427,46013255,46013657,46014124,46014371,46016250	46009064,46010098,46010631,46011050,46011316,46011747,46012313,46012582,46013534,46013796,46014274,46014474,46016561	Gene ID= ENSG00000100985.7 TPM= 1.06 Transcript Type= protein_coding
chr20	46021699	46023581	46021699	46023581	+	ENST00000628272.1@SLC12A5	ENST00000628272.1	protein_coding	46021699,46023369	46021886,46023581	Gene ID= ENSG00000124140.13 TPM= 1.06 Transcript Type= protein_coding
chr20	46060985	46089952	46060985	46089952	-	ENST00000290231.10@NCOA5	ENST00000290231.10	protein_coding	46089817,46079387,46070210,46068502,46067055,46065029,46063360,46060985	46089952,46079453,46070536,46068638,46067181,46065228,46063680,46062889	Gene ID= ENSG00000124160.11 TPM= 18.06 Transcript Type= protein_coding
chr20	46088869	46089735	46088869	46089735	-	transcript2011.chr20.nnic@NA	transcript2011.chr20.nnic	NA	46088869	46089735	Gene ID= novel_gene_chr20_2012 TPM= 2.12 Transcript Type= NA
chr20	46221048	46221260	46221048	46221260	+	transcript2025.chr20.nnic@NA	transcript2025.chr20.nnic	NA	46221048	46221260	Gene ID= novel_gene_chr20_2026 TPM= 2.12 Transcript Type= NA
chr20	46349530	46364458	46349530	46364458	-	ENST00000317734.12@SLC35C2	ENST00000317734.12	protein_coding	46364371,46358691,46358387,46357623,46356574,46355802,46355073,46354882,46352051,46350761,46349530	46364458,46358763,46358558,46357773,46356637,46355874,46355241,46354965,46352226,46350890,46350524	Gene ID= ENSG00000080189.14 TPM= 1.06 Transcript Type= protein_coding
chr20	46349946	46364439	46349946	46364439	-	transcript2036.chr20.nic@SLC35C2	transcript2036.chr20.nic	protein_coding	46364371,46358387,46357623,46356574,46355802,46355073,46354882,46352051,46349946	46364439,46358763,46357773,46356637,46355874,46355241,46354965,46352226,46350890	Gene ID= ENSG00000080189.14 TPM= 2.12 Transcript Type= NA
chr20	46355991	46364439	46355991	46364439	-	transcript2037.chr20.nic@SLC35C2	transcript2037.chr20.nic	protein_coding	46364371,46358387,46357623,46355991	46364439,46358763,46357773,46356637	Gene ID= ENSG00000080189.14 TPM= 5.31 Transcript Type= NA
chr20	46366050	46406626	46366050	46406626	-	transcript2039.chr20.nic@ELMO2	transcript2039.chr20.nic	protein_coding	46406548,46398697,46394405,46394049,46393529,46393093,46389039,46387338,46386124,46383416,46380253,46375668,46375236,46374536,46374332,46373399,46371806,46371579,46371352,46370443,46368891,46366050	46406626,46398771,46394503,46394089,46393601,46393143,46389220,46387437,46386275,46383494,46380303,46375790,46375370,46374640,46374440,46373535,46371969,46371691,46371459,46370525,46368968,46367560	Gene ID= ENSG00000062598.17 TPM= 11.63 Transcript Type= NA
chr20	46366050	46406625	46366050	46406625	-	transcript2044.chr20.nic@ELMO2	transcript2044.chr20.nic	protein_coding	46406548,46394405,46394049,46393529,46393093,46389039,46387338,46386124,46383416,46380253,46375668,46375236,46374536,46374332,46373399,46371806,46371579,46371352,46370443,46368891,46366050	46406625,46394532,46394089,46393601,46393143,46389220,46387437,46386275,46383494,46380303,46375790,46375370,46374640,46374440,46373535,46371969,46371691,46371459,46370525,46368968,46367560	Gene ID= ENSG00000062598.17 TPM= 9.51 Transcript Type= NA
chr20	46366050	46406626	46366050	46406626	-	transcript2045.chr20.nic@ELMO2	transcript2045.chr20.nic	protein_coding	46406548,46398697,46394405,46394049,46393093,46389039,46387338,46386124,46383416,46380253,46375668,46375236,46374536,46374332,46373399,46371806,46371579,46371352,46370443,46368891,46366050	46406626,46398771,46394503,46394089,46393143,46389220,46387437,46386275,46383494,46380303,46375790,46375370,46374640,46374440,46373535,46371969,46371691,46371459,46370525,46368968,46367560	Gene ID= ENSG00000062598.17 TPM= 3.98 Transcript Type= NA
chr20	46366050	46406626	46366050	46406626	-	transcript2047.chr20.nic@ELMO2	transcript2047.chr20.nic	protein_coding	46406548,46398697,46394405,46394049,46393529,46393093,46389039,46386124,46383416,46380253,46375668,46375236,46374536,46374332,46373399,46371806,46371579,46371352,46370443,46368891,46366050	46406626,46398771,46394532,46394089,46393601,46393143,46389220,46386275,46383494,46380303,46375790,46375370,46374640,46374440,46373535,46371969,46371691,46371459,46370525,46368968,46367560	Gene ID= ENSG00000062598.17 TPM= 4.99 Transcript Type= NA
chr20	46366049	46406617	46366049	46406617	-	ENST00000290246.10@ELMO2	ENST00000290246.10	protein_coding	46406548,46398697,46394405,46394049,46393529,46393093,46389039,46387338,46386124,46383416,46380253,46375668,46375236,46374536,46374332,46373399,46371806,46371579,46371352,46370443,46368891,46366049	46406617,46398771,46394532,46394089,46393601,46393143,46389220,46387437,46386275,46383494,46380303,46375790,46375370,46374640,46374440,46373535,46371969,46371691,46371459,46370525,46368968,46367560	Gene ID= ENSG00000062598.17 TPM= 30.48 Transcript Type= protein_coding
chr20	46366055	46406632	46366055	46406632	-	ENST00000396391.5@ELMO2	ENST00000396391.5	protein_coding	46406548,46394405,46394049,46393529,46393093,46389039,46387338,46386124,46383416,46380253,46375668,46375236,46374536,46374332,46373399,46371806,46371579,46371352,46370443,46368891,46366055	46406632,46394503,46394089,46393601,46393143,46389220,46387437,46386275,46383494,46380303,46375790,46375370,46374640,46374440,46373535,46371969,46371691,46371459,46370525,46368968,46367560	Gene ID= ENSG00000062598.17 TPM= 13.75 Transcript Type= protein_coding
chr20	46684365	46689779	46684365	46689779	-	ENST00000372114.3@TP53RK	ENST00000372114.3	protein_coding	46689132,46684365	46689779,46687231	Gene ID= ENSG00000172315.5 TPM= 5.31 Transcript Type= protein_coding
chr20	46709487	46736347	46709487	46736347	+	ENST00000359271.3@SLC2A10	ENST00000359271.3	protein_coding	46709487,46725041,46726864,46729353,46733756	46709740,46726324,46726986,46729488,46736347	Gene ID= ENSG00000197496.5 TPM= 3.19 Transcript Type= protein_coding
chr20	47209346	47210846	47209346	47210846	-	transcript2072.chr20.nnic@NA	transcript2072.chr20.nnic	NA	47209346	47210846	Gene ID= novel_gene_chr20_2073 TPM= 2.12 Transcript Type= NA
chr20	47286372	47288473	47286372	47288473	+	transcript2068.chr20.nnic@NA	transcript2068.chr20.nnic	NA	47286372	47288473	Gene ID= novel_gene_chr20_2069 TPM= 3.19 Transcript Type= NA
chr20	47348661	47350350	47348661	47350350	+	transcript2070.chr20.nnic@NA	transcript2070.chr20.nnic	NA	47348661	47350350	Gene ID= novel_gene_chr20_2071 TPM= 7.44 Transcript Type= NA
chr20	47352561	47354633	47352561	47354633	+	ENST00000413818.2@AL031666.1	ENST00000413818.2	antisense_RNA	47352561,47353005	47352740,47354633	Gene ID= ENSG00000231119.2 TPM= 4.25 Transcript Type= antisense_RNA
chr20	47353426	47356344	47353426	47356344	+	transcript2066.chr20.nnic@NA	transcript2066.chr20.nnic	NA	47353426	47356344	Gene ID= novel_gene_chr20_2067 TPM= 5.31 Transcript Type= NA
chr20	47505065	47509223	47505065	47509223	+	transcript2079.chr20.nnic@NA	transcript2079.chr20.nnic	NA	47505065	47509223	Gene ID= novel_gene_chr20_2080 TPM= 6.37 Transcript Type= NA
chr20	47657406	47785511	47657406	47785511	-	transcript2084.chr20.nic@SULF2	transcript2084.chr20.nic	protein_coding	47785343,47757189,47736703,47702519,47690126,47684431,47682994,47678676,47677078,47676494,47672198,47666260,47665857,47665199,47664130,47663453,47663070,47661773,47659697,47659399,47657406	47785511,47757463,47736942,47702670,47690295,47684581,47683169,47678804,47677134,47676623,47672393,47666488,47665953,47665293,47664189,47663622,47663212,47661896,47659730,47659452,47658392	Gene ID= ENSG00000196562.14 TPM= 3.19 Transcript Type= NA
chr20	47656912	47786586	47656912	47786586	-	ENST00000359930.8@SULF2	ENST00000359930.8	protein_coding	47785835,47757189,47736703,47702519,47690126,47684431,47682994,47678676,47677078,47676494,47672198,47666260,47665857,47665199,47664130,47663453,47663070,47661773,47659697,47659399,47656912	47786586,47757463,47736942,47702670,47690295,47684581,47683169,47678804,47677134,47676623,47672393,47666488,47665953,47665293,47664189,47663622,47663212,47661896,47659730,47659452,47658392	Gene ID= ENSG00000196562.14 TPM= 3.19 Transcript Type= protein_coding
chr20	47657406	47786616	47657406	47786616	-	ENST00000484875.5@SULF2	ENST00000484875.5	protein_coding	47786048,47757189,47736703,47702519,47690126,47684431,47682994,47678676,47677078,47676494,47672198,47666260,47665857,47665199,47664130,47663453,47663070,47661773,47659697,47659399,47657406	47786616,47757463,47736942,47702670,47690295,47684581,47683169,47678804,47677134,47676623,47672393,47666488,47665953,47665293,47664189,47663622,47663212,47661896,47659730,47659452,47658392	Gene ID= ENSG00000196562.14 TPM= 1.06 Transcript Type= protein_coding
chr20	47657668	47786554	47657668	47786554	-	ENST00000467815.5@SULF2	ENST00000467815.5	protein_coding	47786048,47757189,47736703,47702519,47690126,47684431,47682994,47678676,47677078,47676494,47672198,47666260,47665857,47665199,47664130,47663453,47663070,47661773,47659697,47659399,47657668	47786554,47757463,47736942,47702670,47690295,47684581,47683169,47678804,47677134,47676623,47672393,47666488,47665953,47665293,47664189,47663622,47663212,47661896,47659721,47659452,47658392	Gene ID= ENSG00000196562.14 TPM= 16.99 Transcript Type= protein_coding
chr20	48921715	48994801	48921715	48994801	+	transcript2096.chr20.nic@ARFGEF2	transcript2096.chr20.nic	protein_coding	48921715,48941199,48941864,48951323,48952705,48953556,48963830,48965872,48969147,48971120,48972326,48973145,48974766,48976016,48984729,48985408,48988304,48988491,48989285,48989556,48991040,48994451	48922010,48941229,48941987,48951469,48952884,48953790,48963898,48966023,48969277,48971354,48972425,48973284,48974874,48976199,48984840,48985613,48988388,48988662,48989436,48989684,48991198,48994801	Gene ID= ENSG00000124198.8 TPM= 8.5 Transcript Type= NA
chr20	48921715	48969565	48921715	48969565	+	transcript2098.chr20.nic@ARFGEF2	transcript2098.chr20.nic	protein_coding	48921715,48941199,48941864,48951323,48952705,48953556,48963830,48965872,48969147	48922010,48941229,48941987,48951469,48952884,48953790,48963898,48966023,48969565	Gene ID= ENSG00000124198.8 TPM= 2.12 Transcript Type= NA
chr20	49046312	49096952	49046312	49096952	+	ENST00000262982.2@CSE1L	ENST00000262982.2	protein_coding	49046312,49058453,49063202,49066192,49066365,49067190,49068715,49070205,49072286,49072568,49074785,49075318,49076980,49078561,49084026,49085283,49088009,49089247,49089538,49090742,49090937,49092046,49094140,49094732,49096349	49046423,49058548,49063344,49066293,49066510,49067280,49068822,49070297,49072453,49072697,49074850,49075520,49077064,49078622,49084162,49085386,49088106,49089397,49089746,49090839,49091022,49092127,49094286,49094963,49096952	Gene ID= ENSG00000124207.16 TPM= 11.68 Transcript Type= protein_coding
chr20	49113523	49188367	49113523	49188367	-	ENST00000340954.11@STAU1	ENST00000340954.11	protein_coding	49188116,49179122,49174195,49153933,49151582,49135833,49124375,49123092,49119982,49118333,49117777,49117126,49115782,49113523	49188367,49179244,49174269,49154071,49151747,49135931,49124587,49123235,49120128,49118408,49118096,49117248,49115867,49114893	Gene ID= ENSG00000124214.19 TPM= 7.04 Transcript Type= protein_coding
chr20	49113523	49188367	49113523	49188367	-	ENST00000347458.9@STAU1	ENST00000347458.9	protein_coding	49188116,49153933,49151582,49135833,49124375,49123092,49119982,49118333,49117777,49117126,49115782,49113523	49188367,49154071,49151747,49135931,49124587,49123235,49120128,49118408,49118096,49117248,49115867,49114893	Gene ID= ENSG00000124214.19 TPM= 7.04 Transcript Type= protein_coding
chr20	49124397	49188338	49124397	49188338	-	transcript2125.chr20.nic@STAU1	transcript2125.chr20.nic	protein_coding	49188116,49174195,49165997,49153933,49151582,49135833,49124397	49188338,49174269,49166285,49154071,49151747,49135931,49124587	Gene ID= ENSG00000124214.19 TPM= 4.43 Transcript Type= NA
chr20	49113339	49188367	49113339	49188367	-	ENST00000371856.6@STAU1	ENST00000371856.6	protein_coding	49188116,49174195,49165997,49153933,49151582,49135833,49124375,49123092,49119982,49118333,49117777,49117126,49115782,49113339	49188367,49174269,49166285,49154071,49151747,49135931,49124587,49123235,49120128,49118408,49118096,49117248,49115867,49114893	Gene ID= ENSG00000124214.19 TPM= 33.42 Transcript Type= protein_coding
chr20	49113341	49188367	49113341	49188367	-	ENST00000371828.7@STAU1	ENST00000371828.7	protein_coding	49188116,49174195,49153933,49151582,49135833,49124375,49123092,49119982,49118333,49117777,49117126,49115782,49113341	49188367,49174269,49154071,49151747,49135931,49124605,49123235,49120128,49118408,49118096,49117248,49115867,49114893	Gene ID= ENSG00000124214.19 TPM= 20.82 Transcript Type= protein_coding
chr20	49113523	49188367	49113523	49188367	-	ENST00000360426.8@STAU1	ENST00000360426.8	protein_coding	49188116,49174195,49153933,49151582,49135833,49124375,49123092,49119982,49118333,49117777,49117126,49115782,49113523	49188367,49174269,49154071,49151747,49135931,49124587,49123235,49120128,49118408,49118096,49117248,49115867,49114893	Gene ID= ENSG00000124214.19 TPM= 24.04 Transcript Type= protein_coding
chr20	49132053	49134447	49132053	49134447	+	transcript2128.chr20.nnic@NA	transcript2128.chr20.nnic	NA	49132053	49134447	Gene ID= novel_gene_chr20_2129 TPM= 5.31 Transcript Type= NA
chr20	49219295	49244075	49219295	49244075	+	ENST00000622530.4@DDX27	ENST00000622530.4	protein_coding	49219295,49221452,49222957,49223268,49224945,49225113,49226430,49228715,49230199,49233306,49233568,49234935,49236150,49236333,49238949,49239236,49241893,49242083,49242594,49243629,49243816	49219541,49221598,49223016,49223433,49224991,49225199,49226535,49228888,49230349,49233405,49233709,49235088,49236231,49236510,49239055,49239338,49241987,49242206,49242681,49243703,49244075	Gene ID= ENSG00000124228.14 TPM= 21.24 Transcript Type= protein_coding
chr20	49219416	49244070	49219416	49244070	+	ENST00000618172.4@DDX27	ENST00000618172.4	protein_coding	49219416,49221452,49222957,49223268,49224945,49225113,49226430,49228715,49230199,49233306,49233568,49234935,49236150,49236333,49238949,49239236,49241893,49242083,49242594,49243629,49243816	49219541,49221598,49223016,49223433,49224991,49225199,49226535,49228888,49230349,49233405,49233709,49235088,49236231,49236510,49239055,49239338,49241987,49242206,49242681,49243703,49244070	Gene ID= ENSG00000124228.14 TPM= 14.87 Transcript Type= protein_coding
chr20	49237946	49278426	49237946	49278426	-	ENST00000371754.8@ZNFX1	ENST00000371754.8	protein_coding	49278021,49275779,49269942,49266135,49264716,49263334,49260463,49257417,49255808,49254495,49253666,49252720,49251527,49241810,49237946	49278426,49275887,49271750,49266266,49264864,49263483,49260577,49257664,49255947,49254649,49253811,49252830,49251622,49241923,49239300	Gene ID= ENSG00000124201.14 TPM= 8.5 Transcript Type= protein_coding
chr20	49257417	49278047	49257417	49278047	-	transcript2142.chr20.nic@ZNFX1	transcript2142.chr20.nic	protein_coding	49277930,49275779,49269942,49266135,49264716,49263334,49260463,49257417	49278047,49275887,49271750,49266266,49264864,49263483,49260577,49257664	Gene ID= ENSG00000124201.14 TPM= 7.44 Transcript Type= NA
chr20	49278178	49289260	49278178	49289260	+	ENST00000450535.5@ZFAS1	ENST00000450535.5	antisense_RNA	49278178,49279104,49280485,49280903,49281752,49289045	49278716,49279208,49280570,49280964,49281818,49289260	Gene ID= ENSG00000177410.12 TPM= 1.06 Transcript Type= antisense_RNA
chr20	49278178	49289260	49278178	49289260	+	ENST00000371743.7@ZFAS1	ENST00000371743.7	antisense_RNA	49278178,49279104,49280485,49280903,49289045	49278716,49279208,49280570,49280964,49289260	Gene ID= ENSG00000177410.12 TPM= 3.19 Transcript Type= antisense_RNA
chr20	49278178	49289260	49278178	49289260	+	ENST00000417721.5@ZFAS1	ENST00000417721.5	antisense_RNA	49278178,49279104,49289045	49278716,49279208,49289260	Gene ID= ENSG00000177410.12 TPM= 2.12 Transcript Type= antisense_RNA
chr20	49632945	49713878	49632945	49713878	-	ENST00000371711.4@B4GALT5	ENST00000371711.4	protein_coding	49713576,49656568,49646965,49643526,49642468,49640478,49639678,49637341,49632945	49713878,49656702,49647078,49643650,49642584,49640665,49639800,49637442,49636459	Gene ID= ENSG00000158470.5 TPM= 20.18 Transcript Type= protein_coding
chr20	49886371	49892242	49886371	49892242	+	ENST00000490250.1@SLC9A8	ENST00000490250.1	protein_coding	49886371,49887829	49886898,49892242	Gene ID= ENSG00000197818.11 TPM= 10.62 Transcript Type= processed_transcript
chr20	49903391	49915508	49903391	49915508	-	ENST00000289431.9@SPATA2	ENST00000289431.9	protein_coding	49915380,49908155,49903391	49915508,49908592,49906845	Gene ID= ENSG00000158480.10 TPM= 3.19 Transcript Type= protein_coding
chr20	49936348	49953892	49936348	49953892	+	ENST00000244061.5@RNF114	ENST00000244061.5	protein_coding	49936348,49941561,49945382,49946136,49949248,49952076	49936552,49941711,49945488,49946250,49949355,49953892	Gene ID= ENSG00000124226.10 TPM= 53.11 Transcript Type= protein_coding
chr20	49936401	49939764	49936401	49939764	+	transcript2173.chr20.nnic@NA	transcript2173.chr20.nnic	NA	49936401	49939764	Gene ID= novel_gene_chr20_2174 TPM= 3.19 Transcript Type= NA
chr20	49982999	49988886	49982999	49988886	+	ENST00000244050.2@SNAI1	ENST00000244050.2	protein_coding	49982999,49983824,49987872	49983141,49984351,49988886	Gene ID= ENSG00000124216.3 TPM= 4.25 Transcript Type= protein_coding
chr20	50081124	50113172	50081124	50113172	-	ENST00000396059.7@UBE2V1	ENST00000396059.7	protein_coding	50113107,50084129,50081124	50113172,50084254,50082914	Gene ID= ENSG00000244687.11 TPM= 6.02 Transcript Type= processed_transcript
chr20	50081124	50113173	50081124	50113173	-	ENST00000371674.7@UBE2V1	ENST00000371674.7	protein_coding	50113107,50096672,50084129,50081124	50113173,50096820,50084254,50082914	Gene ID= ENSG00000244687.11 TPM= 38.95 Transcript Type= protein_coding
chr20	50081124	50113139	50081124	50113139	-	ENST00000371657.9@UBE2V1	ENST00000371657.9	protein_coding	50113107,50096672,50081124	50113139,50096820,50082914	Gene ID= ENSG00000244687.11 TPM= 4.96 Transcript Type= protein_coding
chr20	50092473	50094010	50092473	50094010	+	transcript2192.chr20.nnic@NA	transcript2192.chr20.nnic	NA	50092473	50094010	Gene ID= novel_gene_chr20_2193 TPM= 8.5 Transcript Type= NA
chr20	50124044	50153734	50124044	50153734	-	ENST00000453505.6@TMEM189	ENST00000453505.6	protein_coding	50153517,50151212,50143502,50130856,50129546,50127975,50124044	50153734,50151315,50143621,50130947,50129690,50128187,50125179	Gene ID= ENSG00000240849.10 TPM= 1.06 Transcript Type= nonsense_mediated_decay
chr20	50123770	50131132	50123770	50131132	-	ENST00000371656.3@TMEM189	ENST00000371656.3	protein_coding	50131020,50130856,50129546,50127975,50123770	50131132,50130947,50129690,50128187,50125179	Gene ID= ENSG00000240849.10 TPM= 5.31 Transcript Type= protein_coding
chr20	50172590	50176671	50172590	50176671	+	ENST00000411453.2@LINC01273	ENST00000411453.2	lincRNA	50172590,50172923,50176281	50172788,50173017,50176671	Gene ID= ENSG00000231742.5 TPM= 1.06 Transcript Type= lincRNA
chr20	50184598	50191498	50184598	50191498	-	ENST00000613921.1@CEBPB-AS1	ENST00000613921.1	antisense_RNA	50191268,50189998,50189456,50188543,50187013,50184598	50191498,50190285,50189561,50188627,50187127,50186420	Gene ID= ENSG00000277449.1 TPM= 4.25 Transcript Type= antisense_RNA
chr20	50191391	50192587	50191391	50192587	+	transcript2208.chr20.nnic@CEBPB	transcript2208.chr20.nnic	protein_coding	50191391,50192368	50192209,50192587	Gene ID= ENSG00000172216.5 TPM= 2.12 Transcript Type= NA
chr20	50191391	50192666	50191391	50192666	+	transcript2209.chr20.nnic@CEBPB	transcript2209.chr20.nnic	protein_coding	50191391,50192368	50192209,50192666	Gene ID= ENSG00000172216.5 TPM= 2.12 Transcript Type= NA
chr20	50190734	50192689	50190734	50192689	+	ENST00000303004.4@CEBPB	ENST00000303004.4	protein_coding	50190734	50192689	Gene ID= ENSG00000172216.5 TPM= 111.53 Transcript Type= protein_coding
chr20	50510354	50585241	50510354	50585241	+	ENST00000371621.4@PTPN1	ENST00000371621.4	protein_coding	50510354,50561363,50564969,50568380,50574517,50578420,50579168,50579703,50581265,50582692	50510590,50561453,50565069,50568478,50574654,50578629,50579329,50579926,50581460,50585241	Gene ID= ENSG00000196396.9 TPM= 6.37 Transcript Type= protein_coding
chr20	50510361	50584567	50510361	50584567	+	transcript2219.chr20.nic@PTPN1	transcript2219.chr20.nic	protein_coding	50510361,50561363,50564969,50568380,50574517,50578420,50579168,50579703,50581265	50510590,50561453,50565069,50568478,50574654,50578629,50579329,50579926,50584567	Gene ID= ENSG00000196396.9 TPM= 7.44 Transcript Type= NA
chr20	50794894	50877177	50794894	50877177	+	ENST00000358791.9@BCAS4	ENST00000358791.9	protein_coding	50794894,50818211,50830279,50841766,50875997,50876486	50795173,50818282,50830380,50841900,50876093,50877177	Gene ID= ENSG00000124243.17 TPM= 1.06 Transcript Type= protein_coding
chr20	50889048	50931240	50889048	50931240	-	ENST00000396029.7@ADNP	ENST00000396029.7	protein_coding	50930826,50928651,50903889,50902017,50889048	50931240,50928825,50904001,50902109,50894512	Gene ID= ENSG00000101126.15 TPM= 4.25 Transcript Type= protein_coding
chr20	50934867	50958555	50934867	50958555	-	ENST00000371582.8@DPM1	ENST00000371582.8	protein_coding	50958363,50955186,50948629,50945847,50945737,50942031,50941129,50940865,50936148,50934867	50958555,50955285,50948662,50945923,50945762,50942126,50941209,50940933,50936262,50935236	Gene ID= ENSG00000000419.12 TPM= 9.56 Transcript Type= protein_coding
chr20	50934867	50958550	50934867	50958550	-	ENST00000371588.9@DPM1	ENST00000371588.9	protein_coding	50958363,50955186,50948629,50945847,50945737,50942031,50940865,50936148,50934867	50958550,50955285,50948662,50945923,50945762,50942126,50940933,50936262,50935236	Gene ID= ENSG00000000419.12 TPM= 16.99 Transcript Type= protein_coding
chr20	50958812	50961089	50958812	50961089	+	transcript2236.chr20.nnic@NA	transcript2236.chr20.nnic	NA	50958812	50961089	Gene ID= novel_gene_chr20_2237 TPM= 10.62 Transcript Type= NA
chr20	51003656	51023129	51003656	51023129	-	ENST00000371571.4@KCNG1	ENST00000371571.4	protein_coding	51022870,51009565,51003656	51023129,51010364,51004806	Gene ID= ENSG00000026559.13 TPM= 2.12 Transcript Type= protein_coding
chr20	52151278	52191986	52151278	52191986	-	ENST00000216923.4@ZFP64	ENST00000216923.4	protein_coding	52191591,52186832,52165864,52164695,52160123,52151278	52191986,52187071,52166025,52164757,52160374,52153428	Gene ID= ENSG00000020256.19 TPM= 9.56 Transcript Type= protein_coding
chr20	52151278	52191768	52151278	52191768	-	ENST00000371515.8@ZFP64	ENST00000371515.8	protein_coding	52191591,52186832,52165864,52164695,52160123,52151278	52191768,52187065,52166025,52164757,52160374,52153428	Gene ID= ENSG00000020256.19 TPM= 3.19 Transcript Type= protein_coding
chr20	52972221	52973003	52972221	52973003	+	transcript2250.chr20.nnic@NA	transcript2250.chr20.nnic	NA	52972221	52973003	Gene ID= novel_gene_chr20_2251 TPM= 2.12 Transcript Type= NA
chr20	53401776	53404576	53401776	53404576	-	transcript2252.chr20.nnic@NA	transcript2252.chr20.nnic	NA	53401776	53404576	Gene ID= novel_gene_chr20_2253 TPM= 2.12 Transcript Type= NA
chr20	54207847	54219953	54207847	54219953	+	ENST00000371419.6@PFDN4	ENST00000371419.6	protein_coding	54207847,54214351,54215300,54219019	54208124,54214458,54215440,54219953	Gene ID= ENSG00000101132.9 TPM= 11.68 Transcript Type= protein_coding
chr20	54476001	54651171	54476001	54651171	+	transcript2263.chr20.nnic@DOK5	transcript2263.chr20.nnic	protein_coding	54476001,54554933,54588483,54588687,54591616,54610388,54643458,54650415	54476185,54555040,54588597,54588806,54591805,54610523,54643578,54651171	Gene ID= ENSG00000101134.11 TPM= 2.12 Transcript Type= NA
chr20	54475626	54495154	54475626	54495154	+	ENST00000491469.1@DOK5	ENST00000491469.1	protein_coding	54475626,54494800	54476012,54495154	Gene ID= ENSG00000101134.11 TPM= 2.12 Transcript Type= processed_transcript
chr20	54475597	54651171	54475597	54651171	+	ENST00000262593.9@DOK5	ENST00000262593.9	protein_coding	54475597,54554933,54588483,54588687,54591616,54610388,54643458,54650415	54476012,54555040,54588597,54588806,54591805,54610523,54643578,54651171	Gene ID= ENSG00000101134.11 TPM= 59.48 Transcript Type= protein_coding
chr20	56358915	56368663	56358915	56368663	+	ENST00000371384.3@FAM210B	ENST00000371384.3	protein_coding	56358915,56365087,56366071	56359191,56365262,56368663	Gene ID= ENSG00000124098.9 TPM= 30.8 Transcript Type= protein_coding
chr20	56369390	56392295	56369390	56392295	-	ENST00000312783.10@AURKA	ENST00000312783.10	protein_coding	56392168,56390556,56388156,56386257,56384270,56382985,56381433,56373408,56370485,56369390	56392295,56390665,56388202,56386533,56384324,56383176,56381571,56373556,56370659,56370340	Gene ID= ENSG00000087586.17 TPM= 1.41 Transcript Type= protein_coding
chr20	56369390	56392337	56369390	56392337	-	ENST00000395913.7@AURKA	ENST00000395913.7	protein_coding	56392154,56388156,56386257,56384270,56382985,56381433,56373408,56370485,56369390	56392337,56388202,56386533,56384324,56383176,56381571,56373556,56370659,56370340	Gene ID= ENSG00000087586.17 TPM= 1.41 Transcript Type= protein_coding
chr20	56369390	56392296	56369390	56392296	-	ENST00000395915.7@AURKA	ENST00000395915.7	protein_coding	56392168,56388156,56386257,56384270,56382985,56381433,56373408,56370485,56369390	56392296,56388202,56386533,56384324,56383176,56381571,56373556,56370659,56370340	Gene ID= ENSG00000087586.17 TPM= 3.54 Transcript Type= protein_coding
chr20	56392370	56404255	56392370	56404255	+	transcript2280.chr20.nic@CSTF1	transcript2280.chr20.nic	protein_coding	56392370,56395521,56397207,56397644,56398967,56403468	56392538,56395721,56397484,56397841,56399357,56404255	Gene ID= ENSG00000101138.11 TPM= 3.19 Transcript Type= NA
chr20	56392394	56406369	56392394	56406369	+	ENST00000217109.8@CSTF1	ENST00000217109.8	protein_coding	56392394,56395521,56397207,56397644,56398967,56403468	56392713,56395721,56397484,56397841,56399357,56406369	Gene ID= ENSG00000101138.11 TPM= 1.06 Transcript Type= protein_coding
chr20	56468591	56519449	56468591	56519449	+	ENST00000357348.9@RTFDC1	ENST00000357348.9	protein_coding	56468591,56473301,56474678,56476985,56484111,56513315,56516935,56517106,56518087	56468766,56473395,56474771,56477124,56484189,56513428,56516989,56517201,56519449	Gene ID= ENSG00000022277.12 TPM= 192.6 Transcript Type= protein_coding
chr20	56468614	56518887	56468614	56518887	+	ENST00000395881.7@RTFDC1	ENST00000395881.7	protein_coding	56468614,56473301,56474678,56476985,56484111,56513315,56517106,56518087	56468766,56473395,56474771,56477124,56484189,56513428,56517201,56518887	Gene ID= ENSG00000022277.12 TPM= 7.79 Transcript Type= protein_coding
chr20	56629302	56639283	56629302	56639283	+	ENST00000201031.2@TFAP2C	ENST00000201031.2	protein_coding	56629302,56631205,56631805,56633353,56634150,56636610,56637728	56629592,56631690,56631856,56633569,56634268,56636754,56639283	Gene ID= ENSG00000087510.6 TPM= 1.06 Transcript Type= protein_coding
chr20	57351010	57379211	57351010	57379211	+	ENST00000395841.6@RAE1	ENST00000395841.6	protein_coding	57351010,57354032,57354712,57356446,57365356,57366807,57367008,57368705,57373475,57373663,57374607,57378013	57351422,57354128,57354816,57356538,57365442,57366893,57367079,57368812,57373581,57373738,57374801,57379211	Gene ID= ENSG00000101146.12 TPM= 36.11 Transcript Type= protein_coding
chr20	57384160	57393062	57384160	57393062	-	ENST00000417346.1@AL109955.1	ENST00000417346.1	antisense_RNA	57392279,57384160	57393062,57384915	Gene ID= ENSG00000218018.2 TPM= 1.06 Transcript Type= antisense_RNA
chr20	57391399	57409333	57391399	57409333	+	transcript2301.chr20.nnic@RBM38	transcript2301.chr20.nnic	protein_coding	57391399,57392397,57392654,57393279,57407543	57391818,57392492,57392777,57393333,57409333	Gene ID= ENSG00000132819.16 TPM= 75.41 Transcript Type= NA
chr20	57391407	57409333	57391407	57409333	+	ENST00000356208.9@RBM38	ENST00000356208.9	protein_coding	57391407,57392654,57393279,57407543	57391818,57392777,57393333,57409333	Gene ID= ENSG00000132819.16 TPM= 188 Transcript Type= protein_coding
chr20	57648392	57709902	57648392	57709902	-	ENST00000341744.7@PMEPA1	ENST00000341744.7	protein_coding	57709474,57659543,57653033,57648392	57709902,57659697,57653086,57652598	Gene ID= ENSG00000124225.15 TPM= 13.81 Transcript Type= protein_coding
chr20	57710183	57712780	57710183	57712780	+	ENST00000614771.1@NKILA	ENST00000614771.1	antisense_RNA	57710183	57712780	Gene ID= ENSG00000278709.1 TPM= 6.37 Transcript Type= antisense_RNA
chr20	58309696	58367507	58309696	58367507	+	ENST00000244040.3@RAB22A	ENST00000244040.3	protein_coding	58309696,58311043,58343718,58353273,58353432,58354156,58359606	58310012,58311122,58343799,58353344,58353538,58354265,58367507	Gene ID= ENSG00000124209.3 TPM= 11.68 Transcript Type= protein_coding
chr20	58389223	58445552	58389223	58445552	+	transcript2321.chr20.nic@VAPB	transcript2321.chr20.nic	protein_coding	58389223,58390128,58418211,58434602,58438945,58440907,58444077	58389517,58390340,58418363,58434705,58439025,58441083,58445552	Gene ID= ENSG00000124164.15 TPM= 16.99 Transcript Type= NA
chr20	58389122	58451101	58389122	58451101	+	ENST00000475243.5@VAPB	ENST00000475243.5	protein_coding	58389122,58418211,58434602,58438945,58440907,58444077	58389517,58418363,58434705,58439025,58441083,58451101	Gene ID= ENSG00000124164.15 TPM= 144.45 Transcript Type= protein_coding
chr20	58651283	58679526	58651283	58679526	+	ENST00000371141.8@STX16	ENST00000371141.8	protein_coding	58651283,58659623,58667490,58667987,58669291,58670512,58671154,58673631,58676187	58652138,58659634,58667597,58668127,58669453,58670603,58671297,58673711,58679526	Gene ID= ENSG00000124222.22 TPM= 5.31 Transcript Type= protein_coding
chr20	58692613	58715844	58692613	58715844	+	ENST00000356091.10@NPEPL1	ENST00000356091.10	protein_coding	58692613,58693737,58694422,58698684,58699197,58701016,58707123,58712479,58713420,58713917,58714560,58715168	58693050,58693922,58694592,58698773,58699278,58701158,58707200,58712579,58713543,58714093,58714670,58715844	Gene ID= ENSG00000215440.11 TPM= 122.15 Transcript Type= protein_coding
chr20	58817132	58817725	58817132	58817725	-	ENST00000596276.1@AL132655.2	ENST00000596276.1	lincRNA	58817132	58817725	Gene ID= ENSG00000268649.5 TPM= 1.06 Transcript Type= lincRNA
chr20	58889100	58911192	58889100	58911192	+	ENST00000477931.5@GNAS	ENST00000477931.5	protein_coding	58889100,58895612,58898941,58903531,58903672,58905383,58909162,58909350,58909521,58909684,58909951,58910334,58910683	58889353,58895684,58898985,58903585,58903791,58905480,58909216,58909423,58909579,58909804,58910081,58910401,58911192	Gene ID= ENSG00000087460.24 TPM= 38.65 Transcript Type= processed_transcript
chr20	58889171	58911179	58889171	58911179	+	ENST00000480975.5@GNAS	ENST00000480975.5	protein_coding	58889171,58895612,58903531,58903672,58905383,58909162,58909350,58909521,58909684,58909951,58910334,58910683	58889353,58895684,58903585,58903791,58905480,58909216,58909423,58909579,58909804,58910081,58910401,58911179	Gene ID= ENSG00000087460.24 TPM= 36.16 Transcript Type= processed_transcript
chr20	58891303	58911192	58891303	58911192	+	ENST00000371085.7@GNAS	ENST00000371085.7	protein_coding	58891303,58895612,58898941,58903531,58903672,58905383,58909162,58909350,58909521,58909684,58909951,58910334,58910683	58891865,58895684,58898985,58903585,58903791,58905480,58909216,58909423,58909579,58909804,58910081,58910401,58911192	Gene ID= ENSG00000087460.24 TPM= 1683.54 Transcript Type= protein_coding
chr20	58891364	58911192	58891364	58911192	+	ENST00000265620.11@GNAS	ENST00000265620.11	protein_coding	58891364,58895612,58903531,58903672,58905383,58909162,58909350,58909521,58909684,58909951,58910334,58910683	58891865,58895684,58903585,58903791,58905480,58909216,58909423,58909579,58909804,58910081,58910401,58911192	Gene ID= ENSG00000087460.24 TPM= 1398.45 Transcript Type= protein_coding
chr20	58981242	58995133	58981242	58995133	+	transcript2481.chr20.nic@NELFCD	transcript2481.chr20.nic	protein_coding	58981242,58986093,58986754,58987708,58988914,58989488,58989858,58990910,58991312,58991881,58992998,58993449,58993624,58994110,58994642	58981369,58986208,58986863,58987817,58989021,58989640,58989988,58991075,58991446,58992020,58993112,58993544,58993675,58994191,58995133	Gene ID= ENSG00000101158.13 TPM= 2.47 Transcript Type= NA
chr20	58981208	58995133	58981208	58995133	+	ENST00000602795.5@NELFCD	ENST00000602795.5	protein_coding	58981208,58986093,58986754,58987708,58988914,58989488,58989858,58990910,58991312,58991881,58992998,58993449,58993624,58994110,58994642	58981369,58986208,58986863,58987817,58989021,58989640,58989988,58991075,58991446,58992020,58993112,58993544,58993764,58994239,58995133	Gene ID= ENSG00000101158.13 TPM= 62.49 Transcript Type= protein_coding
chr20	58981295	58995133	58981295	58995133	+	transcript2484.chr20.nic@NELFCD	transcript2484.chr20.nic	protein_coding	58981295,58986093,58986754,58987708,58988914,58989488,58989858,58990910,58991312,58991881,58992998,58993449,58993624,58994110,58994642	58981369,58986208,58986863,58987817,58989021,58989640,58990232,58991075,58991446,58992020,58993112,58993544,58993764,58994239,58995133	Gene ID= ENSG00000101158.13 TPM= 3.01 Transcript Type= NA
chr20	58995185	59007247	58995185	59007247	-	ENST00000217131.5@CTSZ	ENST00000217131.5	protein_coding	59006986,59006322,59001465,58997603,58996639,58995185	59007247,59006485,59001644,58997753,58996801,58995759	Gene ID= ENSG00000101160.13 TPM= 2.12 Transcript Type= protein_coding
chr20	59025467	59032382	59025467	59032382	-	ENST00000243997.7@ATP5E	ENST00000243997.7	protein_coding	59032220,59030303,59025467	59032382,59030429,59028841	Gene ID= ENSG00000124172.9 TPM= 3.19 Transcript Type= protein_coding
chr20	59028678	59032345	59028678	59032345	-	ENST00000395659.1@ATP5E	ENST00000395659.1	protein_coding	59032220,59028678	59032345,59030429	Gene ID= ENSG00000124172.9 TPM= 4.25 Transcript Type= protein_coding
chr20	59033145	59042909	59033145	59042909	-	ENST00000355937.8@PRELID3B	ENST00000355937.8	protein_coding	59042699,59038466,59037191,59036690,59036471,59033145	59042909,59038634,59037280,59036760,59036573,59035126	Gene ID= ENSG00000101166.15 TPM= 65.85 Transcript Type= protein_coding
chr20	59835853	59847711	59835853	59847711	+	ENST00000492611.5@PHACTR3	ENST00000492611.5	protein_coding	59835853,59840369,59841395,59845189,59847115	59836560,59840430,59841535,59845265,59847711	Gene ID= ENSG00000087495.16 TPM= 2.12 Transcript Type= retained_intron
chr20	59933764	59948680	59933764	59948680	+	ENST00000358293.7@FAM217B	ENST00000358293.7	protein_coding	59933764,59937990,59942198,59942427,59943940	59933853,59938112,59942309,59942512,59948680	Gene ID= ENSG00000196227.10 TPM= 3.19 Transcript Type= protein_coding
chr20	59936668	59940297	59936668	59940297	-	ENST00000370996.4@PPP1R3D	ENST00000370996.4	protein_coding	59936668	59940297	Gene ID= ENSG00000132825.6 TPM= 1.06 Transcript Type= protein_coding
chr20	60323784	60326136	60323784	60326136	+	transcript2528.chr20.nnic@NA	transcript2528.chr20.nnic	NA	60323784	60326136	Gene ID= novel_gene_chr20_2529 TPM= 2.12 Transcript Type= NA
chr20	60336866	60341480	60336866	60341480	+	transcript2530.chr20.nnic@NA	transcript2530.chr20.nnic	NA	60336866	60341480	Gene ID= novel_gene_chr20_2531 TPM= 2.12 Transcript Type= NA
chr20	61974798	62065810	61974798	62065810	-	ENST00000252996.8@TAF4	ENST00000252996.8	protein_coding	62064451,62014547,62012815,62010046,62009052,62007547,62006510,62003731,62003160,62000552,62000124,61998983,61998136,61997550,61974798	62065810,62014707,62012934,62010165,62009174,62007636,62006758,62003878,62003274,62000721,62000254,61999108,61998192,61997669,61976335	Gene ID= ENSG00000130699.18 TPM= 4.25 Transcript Type= protein_coding
chr20	62136907	62143462	62136907	62143462	-	transcript2545.chr20.nic@PSMA7	transcript2545.chr20.nic	protein_coding	62143208,62140818,62139075,62138171,62137364,62136907	62143462,62140944,62139905,62138290,62137426,62136949	Gene ID= ENSG00000101182.14 TPM= 183.4 Transcript Type= NA
chr20	62136735	62143430	62136735	62143430	-	ENST00000370873.8@PSMA7	ENST00000370873.8	protein_coding	62143208,62140818,62139781,62139075,62138171,62137364,62136735	62143430,62140944,62139905,62139197,62138290,62137426,62136949	Gene ID= ENSG00000101182.14 TPM= 459.57 Transcript Type= protein_coding
chr20	62183023	62203568	62183023	62203568	+	transcript2552.chr20.nic@MTG2	transcript2552.chr20.nic	protein_coding	62183023,62193416,62195802,62197852,62198634,62199119,62200683,62203084	62183057,62193624,62195949,62197967,62198852,62199257,62202843,62203568	Gene ID= ENSG00000101181.17 TPM= 7.97 Transcript Type= NA
chr20	62183029	62203566	62183029	62203566	+	transcript2560.chr20.nnic@MTG2	transcript2560.chr20.nnic	protein_coding	62183029,62195802,62197852,62198634,62199119,62200683	62183057,62195949,62197967,62198852,62199257,62203566	Gene ID= ENSG00000101181.17 TPM= 7.97 Transcript Type= NA
chr20	62183045	62202767	62183045	62202767	+	ENST00000370823.7@MTG2	ENST00000370823.7	protein_coding	62183045,62193416,62195802,62197852,62198634,62199119,62200683	62183057,62193624,62195949,62197967,62198852,62199257,62202767	Gene ID= ENSG00000101181.17 TPM= 3.19 Transcript Type= protein_coding
chr20	62238553	62281879	62238553	62281879	+	transcript2575.chr20.nic@OSBPL2	transcript2575.chr20.nic	protein_coding	62238553,62256057,62259981,62263616,62272125,62273309,62279157,62281058,62281790	62238597,62256221,62260125,62263691,62272259,62273406,62279339,62281165,62281879	Gene ID= ENSG00000130703.15 TPM= 2.12 Transcript Type= NA
chr20	62238485	62296212	62238485	62296212	+	ENST00000313733.7@OSBPL2	ENST00000313733.7	protein_coding	62238485,62256057,62259981,62263616,62272125,62273309,62279157,62281058,62281790,62284046,62286583,62289207,62291703,62293785	62238597,62256221,62260125,62263691,62272259,62273406,62279339,62281165,62281879,62284169,62286711,62289330,62291793,62296212	Gene ID= ENSG00000130703.15 TPM= 29.74 Transcript Type= protein_coding
chr20	62238521	62296211	62238521	62296211	+	ENST00000358053.3@OSBPL2	ENST00000358053.3	protein_coding	62238521,62256057,62260017,62263616,62272125,62273309,62279157,62281058,62281790,62284046,62286583,62289207,62291703,62293785	62238597,62256221,62260125,62263691,62272259,62273406,62279339,62281165,62281879,62284169,62286711,62289330,62291793,62296211	Gene ID= ENSG00000130703.15 TPM= 11.68 Transcript Type= protein_coding
chr20	62302093	62308862	62302093	62308862	+	ENST00000491935.5@ADRM1	ENST00000491935.5	protein_coding	62302093,62302896,62303568,62304461,62306197,62306648,62307371,62307596,62308021,62308368,62308655	62302142,62303049,62303781,62304577,62306320,62306734,62307452,62307828,62308178,62308470,62308862	Gene ID= ENSG00000130706.12 TPM= 342.02 Transcript Type= protein_coding
chr20	62305432	62308603	62305432	62308603	-	transcript2599.chr20.nnic@NA	transcript2599.chr20.nnic	NA	62305432	62308603	Gene ID= novel_gene_chr20_2600 TPM= 7.44 Transcript Type= NA
chr20	62309065	62367312	62309065	62367312	-	ENST00000252999.7@LAMA5	ENST00000252999.7	protein_coding	62366949,62362400,62353134,62352242,62351909,62351704,62346913,62346682,62346506,62346081,62345818,62338468,62338232,62338016,62337804,62337590,62336734,62336340,62335217,62335021,62334522,62334186,62333901,62333564,62333375,62333090,62332557,62332372,62331032,62330743,62330488,62329777,62329138,62328844,62328241,62327866,62327529,62327233,62326865,62326677,62325316,62324441,62324080,62323776,62323456,62322658,62322269,62322019,62320739,62320559,62319684,62318843,62318454,62317662,62317345,62316882,62316671,62315948,62315028,62314799,62314555,62314304,62313649,62313327,62313088,62312888,62312632,62312400,62312173,62311920,62311614,62311401,62311162,62310902,62310665,62310419,62310178,62309988,62309716,62309065	62367312,62362552,62353251,62352360,62352079,62351801,62347028,62346800,62346596,62346215,62345877,62338608,62338369,62338150,62337938,62337727,62336786,62336445,62335269,62335126,62334621,62334342,62334039,62333706,62333481,62333243,62332717,62332480,62331129,62330944,62330614,62329916,62329253,62329055,62328445,62328010,62327669,62327406,62326966,62326760,62325546,62324554,62324204,62323856,62323670,62322758,62322449,62322168,62320890,62320669,62319795,62319013,62318650,62317778,62317499,62317023,62316773,62316058,62315207,62314947,62314725,62314440,62313802,62313460,62313250,62313010,62312780,62312532,62312316,62312050,62311784,62311536,62311307,62311094,62310829,62310572,62310311,62310081,62309835,62309475	Gene ID= ENSG00000130702.15 TPM= 80.72 Transcript Type= protein_coding
chr20	62315765	62320343	62315765	62320343	+	transcript2592.chr20.nnic@NA	transcript2592.chr20.nnic	NA	62315765,62317345,62317662,62318457	62317025,62317499,62317784,62320343	Gene ID= novel_gene_chr20_2593 TPM= 7.44 Transcript Type= NA
chr20	62341019	62343786	62341019	62343786	+	transcript2597.chr20.nnic@NA	transcript2597.chr20.nnic	NA	62341019	62343786	Gene ID= novel_gene_chr20_2598 TPM= 9.56 Transcript Type= NA
chr20	62352995	62356469	62352995	62356469	+	ENST00000456721.2@LAMA5-AS1	ENST00000456721.2	antisense_RNA	62352995,62356192	62353208,62356469	Gene ID= ENSG00000228812.7 TPM= 7.44 Transcript Type= antisense_RNA
chr20	62386303	62386970	62386303	62386970	-	ENST00000610979.1@AL121832.2	ENST00000610979.1	antisense_RNA	62386303	62386970	Gene ID= ENSG00000273619.1 TPM= 2.12 Transcript Type= antisense_RNA
chr20	62387116	62388519	62387116	62388519	+	ENST00000343986.8@RPS21	ENST00000343986.8	protein_coding	62387116,62387321,62387611,62387843,62388309,62388457	62387136,62387388,62387674,62387914,62388364,62388519	Gene ID= ENSG00000171858.17 TPM= 83.38 Transcript Type= protein_coding
chr20	62387123	62388519	62387123	62388519	+	ENST00000492356.2@RPS21	ENST00000492356.2	protein_coding	62387123,62387321,62387611,62387843,62388309	62387136,62387388,62387674,62387914,62388519	Gene ID= ENSG00000171858.17 TPM= 3.72 Transcript Type= processed_transcript
chr20	62550453	62570764	62550453	62570764	+	ENST00000624914.3@MIR1-1HG	ENST00000624914.3	antisense_RNA	62550453,62553465,62564989,62570444	62551038,62553665,62565100,62570764	Gene ID= ENSG00000174407.13 TPM= 31.86 Transcript Type= antisense_RNA
chr20	62552572	62570764	62552572	62570764	+	transcript2636.chr20.nic@MIR1-1HG	transcript2636.chr20.nic	antisense_RNA	62552572,62564989,62570444	62553665,62565100,62570764	Gene ID= ENSG00000174407.13 TPM= 16.99 Transcript Type= NA
chr20	62550463	62552230	62550463	62552230	+	transcript2644.chr20.nnic@NA	transcript2644.chr20.nnic	NA	62550463	62552230	Gene ID= novel_gene_chr20_2645 TPM= 2.12 Transcript Type= NA
chr20	62557570	62562465	62557570	62562465	+	transcript2638.chr20.nnic@NA	transcript2638.chr20.nnic	NA	62557570	62562465	Gene ID= novel_gene_chr20_2639 TPM= 25.49 Transcript Type= NA
chr20	62567462	62570757	62567462	62570757	+	transcript2640.chr20.nnic@NA	transcript2640.chr20.nnic	NA	62567462	62570757	Gene ID= novel_gene_chr20_2641 TPM= 22.84 Transcript Type= NA
chr20	62569914	62573449	62569914	62573449	+	transcript2642.chr20.nnic@NA	transcript2642.chr20.nnic	NA	62569914	62573449	Gene ID= novel_gene_chr20_2643 TPM= 28.15 Transcript Type= NA
chr20	62642445	62672295	62642445	62672295	+	ENST00000217159.5@SLCO4A1	ENST00000217159.5	protein_coding	62642445,62656359,62658677,62660412,62661064,62664934,62666380,62667745,62668012,62668477,62668930,62671750	62642553,62657250,62658767,62660533,62661175,62665088,62666575,62667910,62668184,62668541,62669078,62672295	Gene ID= ENSG00000101187.15 TPM= 22.31 Transcript Type= protein_coding
chr20	62796485	62800588	62796485	62800588	+	transcript2652.chr20.nnic@MRGBP	transcript2652.chr20.nnic	protein_coding	62796485,62797110,62798587,62798853,62799456	62796671,62797231,62798668,62799049,62800588	Gene ID= ENSG00000101189.6 TPM= 5.84 Transcript Type= NA
chr20	62796430	62800593	62796430	62800593	+	transcript2656.chr20.nnic@MRGBP	transcript2656.chr20.nnic	protein_coding	62796430,62797110,62798587,62798975,62799471	62796671,62797231,62798668,62799049,62800593	Gene ID= ENSG00000101189.6 TPM= 3.72 Transcript Type= NA
chr20	62806466	62814000	62806466	62814000	+	transcript2658.chr20.nic@OGFR	transcript2658.chr20.nic	protein_coding	62806466,62808247,62809585,62810499,62811462,62812230	62807605,62808325,62809663,62810565,62811610,62814000	Gene ID= ENSG00000060491.16 TPM= 2.47 Transcript Type= NA
chr20	62805886	62814000	62805886	62814000	+	ENST00000370461.5@OGFR	ENST00000370461.5	protein_coding	62805886,62809585,62810499,62811462,62812230	62808325,62809663,62810565,62811610,62814000	Gene ID= ENSG00000060491.16 TPM= 2.47 Transcript Type= protein_coding
chr20	62804790	62809003	62804790	62809003	+	transcript2660.chr20.nic@OGFR	transcript2660.chr20.nic	protein_coding	62804790,62807537	62805030,62809003	Gene ID= ENSG00000060491.16 TPM= 3.19 Transcript Type= NA
chr20	62804835	62814000	62804835	62814000	+	ENST00000290291.10@OGFR	ENST00000290291.10	protein_coding	62804835,62807537,62808247,62809585,62810499,62811462,62812230	62805030,62807605,62808325,62809663,62810565,62811610,62814000	Gene ID= ENSG00000060491.16 TPM= 50.27 Transcript Type= protein_coding
chr20	62851490	62861815	62851490	62861815	-	transcript2668.chr20.nnic@TCFL5	transcript2668.chr20.nnic	protein_coding	62861024,62860125,62859364,62857395,62854016,62851490	62861815,62860308,62859526,62857638,62854157,62852888	Gene ID= ENSG00000101190.12 TPM= 5.31 Transcript Type= NA
chr20	62845138	62861763	62845138	62861763	-	ENST00000217162.5@TCFL5	ENST00000217162.5	protein_coding	62861024,62860125,62859364,62857395,62854016,62845138	62861763,62860308,62859526,62857638,62854157,62846117	Gene ID= ENSG00000101190.12 TPM= 4.25 Transcript Type= protein_coding
chr20	62904998	62937952	62904998	62937952	-	ENST00000370371.8@DIDO1	ENST00000370371.8	protein_coding	62937796,62914210,62910774,62909699,62907147,62904998	62937952,62914406,62911614,62910020,62907359,62906100	Gene ID= ENSG00000101191.16 TPM= 13.28 Transcript Type= protein_coding
chr20	62905003	62926471	62905003	62926471	-	ENST00000370368.5@DIDO1	ENST00000370368.5	protein_coding	62926439,62914210,62910774,62909699,62907147,62905003	62926471,62914406,62911614,62910020,62907359,62906100	Gene ID= ENSG00000101191.16 TPM= 21.77 Transcript Type= protein_coding
chr20	62905005	62926469	62905005	62926469	-	ENST00000354665.8@DIDO1	ENST00000354665.8	protein_coding	62926432,62914210,62910774,62909699,62907147,62905005	62926469,62914406,62911614,62910020,62907359,62906100	Gene ID= ENSG00000101191.16 TPM= 16.99 Transcript Type= protein_coding
chr20	62878120	62880820	62878120	62880820	-	transcript2681.chr20.nnic@NA	transcript2681.chr20.nnic	NA	62878120	62880820	Gene ID= novel_gene_chr20_2682 TPM= 3.19 Transcript Type= NA
chr20	62938119	62948475	62938119	62948475	+	ENST00000266069.4@GID8	ENST00000266069.4	protein_coding	62938119,62941491,62942987,62943495,62944739	62938253,62941620,62943183,62943692,62948475	Gene ID= ENSG00000101193.7 TPM= 7.44 Transcript Type= protein_coding
chr20	62952668	62968597	62952668	62968597	+	transcript2689.chr20.nic@SLC17A9	transcript2689.chr20.nic	protein_coding	62952668,62956765,62957441,62960504,62962624,62963584,62965132,62965610,62966525,62966703,62967337	62952889,62956962,62957580,62960603,62963369,62964315,62965166,62965725,62966580,62966732,62968597	Gene ID= ENSG00000101194.17 TPM= 5.31 Transcript Type= NA
chr20	63102205	63104386	63102205	63104386	+	ENST00000433161.1@HAR1A	ENST00000433161.1	lincRNA	63102205,63103555	63103254,63104386	Gene ID= ENSG00000225978.3 TPM= 1.06 Transcript Type= lincRNA
chr20	63195429	63216234	63195429	63216234	-	ENST00000370339.7@YTHDF1	ENST00000370339.7	protein_coding	63215866,63215577,63213864,63202287,63195429	63216234,63215601,63213943,63203807,63196734	Gene ID= ENSG00000149658.17 TPM= 52.58 Transcript Type= protein_coding
chr20	63195429	63216165	63195429	63216165	-	transcript2694.chr20.nic@YTHDF1	transcript2694.chr20.nic	protein_coding	63215577,63213864,63202287,63195429	63216165,63213943,63203807,63196734	Gene ID= ENSG00000149658.17 TPM= 18.59 Transcript Type= NA
chr20	63272785	63289793	63272785	63289793	+	ENST00000370283.8@ARFGAP1	ENST00000370283.8	protein_coding	63272785,63275577,63276091,63276480,63277205,63278117,63278899,63281291,63282819,63284866,63285654,63286366,63287564	63272920,63275640,63276200,63276651,63277305,63278203,63278995,63281347,63282851,63284922,63285713,63286442,63289793	Gene ID= ENSG00000101199.12 TPM= 38.24 Transcript Type= protein_coding
chr20	63272785	63289789	63272785	63289789	+	ENST00000519604.5@ARFGAP1	ENST00000519604.5	protein_coding	63272785,63275577,63276480,63277205,63278117,63278899,63281291,63282819,63283851,63284866,63285654,63286372,63287564	63272920,63275640,63276651,63277305,63278203,63278995,63281347,63282851,63283880,63284922,63285713,63286442,63289789	Gene ID= ENSG00000101199.12 TPM= 15.93 Transcript Type= protein_coding
chr20	63477482	63477971	63477482	63477971	-	transcript2707.chr20.nnic@NA	transcript2707.chr20.nnic	NA	63477482	63477971	Gene ID= novel_gene_chr20_2708 TPM= 3.19 Transcript Type= NA
chr20	63488013	63499315	63488013	63499315	-	ENST00000217182.4@EEF1A2	ENST00000217182.4	protein_coding	63499058,63497620,63495856,63494805,63493137,63490479,63488918,63488013	63499315,63497834,63496035,63495101,63493287,63490735,63489152,63488425	Gene ID= ENSG00000101210.10 TPM= 1887.85 Transcript Type= protein_coding
chr20	63520724	63522206	63520724	63522206	+	ENST00000370179.7@PPDPF	ENST00000370179.7	protein_coding	63520724,63521284,63521512,63521668	63520894,63521363,63521589,63522206	Gene ID= ENSG00000125534.9 TPM= 90.28 Transcript Type= protein_coding
chr20	63587602	63627041	63587602	63627041	-	ENST00000370077.1@GMEB2	ENST00000370077.1	protein_coding	63626956,63619267,63604743,63602965,63597757,63595610,63593011,63592533,63592022,63587602	63627041,63619454,63604840,63603092,63597860,63595767,63593082,63592670,63592144,63590729	Gene ID= ENSG00000101216.10 TPM= 8.5 Transcript Type= protein_coding
chr20	63626857	63628706	63626857	63628706	+	transcript2737.chr20.nnic@MHENCR	transcript2737.chr20.nnic	antisense_RNA	63626857,63628245	63627392,63628706	Gene ID= ENSG00000232442.1 TPM= 2.12 Transcript Type= NA
chr20	63627227	63628824	63627227	63628824	+	ENST00000449500.1@MHENCR	ENST00000449500.1	antisense_RNA	63627227,63628190	63627392,63628824	Gene ID= ENSG00000232442.1 TPM= 1.06 Transcript Type= antisense_RNA
chr20	63627250	63628707	63627250	63628707	+	ENST00000411579.1@MHENCR	ENST00000411579.1	antisense_RNA	63627250,63628269	63627392,63628707	Gene ID= ENSG00000232442.1 TPM= 1.06 Transcript Type= antisense_RNA
chr20	63627592	63628701	63627592	63628701	+	transcript2739.chr20.nnic@NA	transcript2739.chr20.nnic	NA	63627592	63628701	Gene ID= novel_gene_chr20_2740 TPM= 2.12 Transcript Type= NA
chr20	63639708	63653427	63639708	63653427	-	ENST00000370053.2@STMN3	ENST00000370053.2	protein_coding	63653327,63644214,63643756,63642108,63639708	63653427,63644309,63643931,63642299,63641397	Gene ID= ENSG00000197457.9 TPM= 19.12 Transcript Type= protein_coding
chr20	63658312	63696253	63658312	63696253	+	ENST00000360203.9@RTEL1	ENST00000360203.9	protein_coding	63658312,63659233,63661298,63661850,63662546,63662829,63666004,63667469,63672556,63673940,63678145,63678268,63679849,63680664,63685523,63685791,63687638,63687937,63688139,63688301,63688528,63689055,63689502,63689750,63690087,63690294,63690805,63691742,63692805,63693143,63694372,63694741,63695066,63695328,63695778	63658466,63659504,63661496,63661943,63662627,63662889,63666079,63667553,63672621,63674093,63678183,63678346,63679946,63680719,63685597,63685872,63687770,63688050,63688179,63688386,63688605,63689132,63689648,63689865,63690210,63690441,63690947,63691837,63693003,63693283,63694488,63694974,63695221,63695650,63696253	Gene ID= ENSG00000258366.7 TPM= 3.19 Transcript Type= protein_coding
chr20	63698643	63708013	63698643	63708013	-	ENST00000622789.4@ARFRP1	ENST00000622789.4	protein_coding	63707867,63706999,63706651,63706357,63702136,63701830,63700602,63698643	63708013,63707097,63706738,63706439,63702217,63701900,63700702,63700530	Gene ID= ENSG00000101246.19 TPM= 49.92 Transcript Type= protein_coding
chr20	63699478	63707916	63699478	63707916	-	ENST00000612157.4@ARFRP1	ENST00000612157.4	protein_coding	63707867,63706999,63706651,63706357,63702136,63701830,63699478	63707916,63707097,63706738,63706439,63702217,63701900,63700702	Gene ID= ENSG00000101246.19 TPM= 9.56 Transcript Type= protein_coding
chr20	63708018	63736141	63708018	63736141	+	transcript2759.chr20.nic@ZGPAT	transcript2759.chr20.nic	protein_coding	63708018,63708553,63733219,63733587,63734705,63735159,63735781	63708118,63709164,63733352,63733712,63734824,63735564,63736141	Gene ID= ENSG00000197114.11 TPM= 2.63 Transcript Type= NA
chr20	63708018	63736141	63708018	63736141	+	transcript2761.chr20.nnic@ZGPAT	transcript2761.chr20.nnic	protein_coding	63708018,63708553,63733219,63733587,63734705,63735159,63735781	63708118,63709164,63733352,63733775,63734824,63735564,63736141	Gene ID= ENSG00000197114.11 TPM= 2.63 Transcript Type= NA
chr20	63708053	63736142	63708053	63736142	+	ENST00000357119.8@ZGPAT	ENST00000357119.8	protein_coding	63708053,63708553,63733219,63733587,63734705,63735159,63735781	63708188,63709164,63733352,63733712,63734824,63735564,63736142	Gene ID= ENSG00000197114.11 TPM= 2.27 Transcript Type= protein_coding
chr20	63708035	63736142	63708035	63736142	+	ENST00000355969.10@ZGPAT	ENST00000355969.10	protein_coding	63708035,63708553,63733219,63733587,63734705,63735159,63735781	63708118,63709164,63733352,63733739,63734824,63735564,63736142	Gene ID= ENSG00000197114.11 TPM= 24.05 Transcript Type= protein_coding
chr20	63707465	63736141	63707465	63736141	+	ENST00000448100.6@ZGPAT	ENST00000448100.6	protein_coding	63707465,63708553,63733219,63733587,63734705,63735159,63735781	63707559,63709164,63733352,63733739,63734824,63735564,63736141	Gene ID= ENSG00000197114.11 TPM= 2.63 Transcript Type= protein_coding
chr20	63708039	63736141	63708039	63736141	+	ENST00000477340.5@ZGPAT	ENST00000477340.5	protein_coding	63708039,63708553,63733219,63733587,63735159,63735781	63708118,63709164,63733352,63734824,63735564,63736141	Gene ID= ENSG00000197114.11 TPM= 2.27 Transcript Type= retained_intron
chr20	63708086	63736142	63708086	63736142	+	ENST00000369967.7@ZGPAT	ENST00000369967.7	protein_coding	63708086,63708553,63733219,63733587,63734705,63735159,63735781	63708188,63709164,63733352,63733739,63734824,63735564,63736142	Gene ID= ENSG00000197114.11 TPM= 3.87 Transcript Type= protein_coding
chr20	63740237	63743505	63740237	63743505	+	transcript2780.chr20.nic@SLC2A4RG	transcript2780.chr20.nic	protein_coding	63740237,63741370,63741869,63742130,63742336,63742699,63742879	63740531,63741479,63742056,63742230,63742615,63742790,63743505	Gene ID= ENSG00000125520.13 TPM= 12.66 Transcript Type= NA
chr20	63739861	63743505	63739861	63743505	+	ENST00000266077.4@SLC2A4RG	ENST00000266077.4	protein_coding	63739861,63740377,63741370,63741869,63742130,63742336,63742699,63742879	63740038,63740531,63741479,63742056,63742230,63742615,63742790,63743505	Gene ID= ENSG00000125520.13 TPM= 32.84 Transcript Type= protein_coding
chr20	63774243	63831321	63774243	63831321	-	transcript2791.chr20.nnic@ZBTB46	transcript2791.chr20.nnic	protein_coding	63831097,63789821,63775678,63774243	63831321,63790790,63775962,63774544	Gene ID= ENSG00000130584.10 TPM= 11.15 Transcript Type= NA
chr20	63774690	63831321	63774690	63831321	-	transcript2793.chr20.nic@ZBTB46	transcript2793.chr20.nic	protein_coding	63831097,63789821,63774690	63831321,63790790,63775962	Gene ID= ENSG00000130584.10 TPM= 13.28 Transcript Type= NA
chr20	63743666	63831214	63743666	63831214	-	ENST00000245663.8@ZBTB46	ENST00000245663.8	protein_coding	63831097,63789821,63775678,63752686,63743666	63831214,63790790,63775962,63752861,63747301	Gene ID= ENSG00000130584.10 TPM= 12.75 Transcript Type= protein_coding
chr20	63765457	63766547	63765457	63766547	+	transcript2794.chr20.nnic@NA	transcript2794.chr20.nnic	NA	63765457	63766547	Gene ID= novel_gene_chr20_2795 TPM= 2.12 Transcript Type= NA
chr20	63861212	63864293	63861212	63864293	-	ENST00000601296.2@AL118506.1	ENST00000601296.2	antisense_RNA	63861212	63864293	Gene ID= ENSG00000268858.2 TPM= 9.56 Transcript Type= antisense_RNA
chr20	63865290	63891545	63865290	63891545	+	ENST00000348257.9@TPD52L2	ENST00000348257.9	protein_coding	63865290,63869296,63873668,63882719,63889190,63889850	63865384,63869441,63873816,63882820,63889238,63891545	Gene ID= ENSG00000101150.17 TPM= 32.93 Transcript Type= protein_coding
chr20	63865290	63891545	63865290	63891545	+	ENST00000346249.8@TPD52L2	ENST00000346249.8	protein_coding	63865290,63869296,63873668,63875816,63882719,63889190,63889850	63865384,63869441,63873816,63875875,63882820,63889238,63891545	Gene ID= ENSG00000101150.17 TPM= 113.65 Transcript Type= protein_coding
chr20	63895182	63936031	63895182	63936031	+	ENST00000360864.8@DNAJC5	ENST00000360864.8	protein_coding	63895182,63928335,63929312,63930851,63931465	63895323,63928452,63929525,63931022,63936031	Gene ID= ENSG00000101152.10 TPM= 69.04 Transcript Type= protein_coding
chr20	63939829	63941661	63939829	63941661	-	transcript2831.chr20.nic@UCKL1	transcript2831.chr20.nic	protein_coding	63940950,63940794,63940594,63940378,63940150,63939829	63941661,63940856,63940716,63940485,63940306,63940055	Gene ID= ENSG00000198276.15 TPM= 16.39 Transcript Type= NA
chr20	63939829	63956415	63939829	63956415	-	ENST00000354216.10@UCKL1	ENST00000354216.10	protein_coding	63956260,63946453,63946161,63945805,63945651,63944545,63944397,63943653,63941110,63940950,63940794,63940594,63940378,63940150,63939829	63956415,63946643,63946267,63945975,63945722,63944734,63944458,63943669,63941208,63941043,63940856,63940716,63940485,63940306,63940055	Gene ID= ENSG00000198276.15 TPM= 151.28 Transcript Type= protein_coding
chr20	63945629	63947090	63945629	63947090	+	transcript2838.chr20.nnic@NA	transcript2838.chr20.nnic	NA	63945629	63947090	Gene ID= novel_gene_chr20_2839 TPM= 2.12 Transcript Type= NA
chr20	63974113	63979642	63974113	63979642	-	ENST00000369886.7@SAMD10	ENST00000369886.7	protein_coding	63979377,63977225,63976971,63975692,63974113	63979642,63977406,63977142,63975832,63975532	Gene ID= ENSG00000130590.13 TPM= 8.5 Transcript Type= protein_coding
chr20	63981135	64033100	63981135	64033100	+	ENST00000266079.4@PRPF6	ENST00000266079.4	protein_coding	63981135,63983047,63984907,63993407,63994916,63995327,63999045,63999603,64001077,64010200,64011285,64016723,64022757,64024555,64025939,64026982,64027603,64028478,64029377,64031918,64032841	63981316,63983215,63985025,63993485,63995092,63995482,63999139,63999759,64001239,64010318,64011503,64016845,64022878,64024693,64026058,64027158,64027736,64028569,64029491,64032044,64033100	Gene ID= ENSG00000101161.7 TPM= 191.01 Transcript Type= protein_coding
chr20	63981096	64033100	63981096	64033100	+	transcript2852.chr20.nnic@PRPF6	transcript2852.chr20.nnic	protein_coding	63981096,63983047,63984907,63993407,63994916,63995327,63999045,63999603,64001077,64010200,64016723,64022757,64024555,64025939,64026982,64027603,64028478,64029377,64031918,64032841	63981316,63983215,63985025,63993485,63995092,63995482,63999139,63999759,64001239,64010318,64016845,64022878,64024693,64026058,64027158,64027736,64028569,64029491,64032044,64033100	Gene ID= ENSG00000101161.7 TPM= 33.81 Transcript Type= NA
chr20	64047582	64049641	64047582	64049641	-	ENST00000340356.8@SOX18	ENST00000340356.8	protein_coding	64049159,64047582	64049641,64048962	Gene ID= ENSG00000203883.6 TPM= 14.87 Transcript Type= protein_coding
chr20	64063227	64072347	64063227	64072347	+	transcript2864.chr20.nic@TCEA2	transcript2864.chr20.nic	protein_coding	64063227,64063892,64066476,64066915,64068047,64069361,64069765,64070260,64070489,64071870,64072172	64063384,64063949,64066538,64067020,64068134,64069491,64069821,64070414,64070635,64071941,64072347	Gene ID= ENSG00000171703.16 TPM= 4.78 Transcript Type= NA
chr20	64063206	64072347	64063206	64072347	+	transcript2868.chr20.nnic@TCEA2	transcript2868.chr20.nnic	protein_coding	64063206,64066406,64066915,64068047,64069361,64069765,64070260,64070489,64071870,64072172	64063384,64066538,64067020,64068134,64069491,64069821,64070414,64070635,64071941,64072347	Gene ID= ENSG00000171703.16 TPM= 4.78 Transcript Type= NA
chr20	64063110	64064123	64063110	64064123	+	transcript2873.chr20.nnic@TCEA2	transcript2873.chr20.nnic	protein_coding	64063110,64063918	64063384,64064123	Gene ID= ENSG00000171703.16 TPM= 9.56 Transcript Type= NA
chr20	64063144	64072346	64063144	64072346	+	ENST00000343484.9@TCEA2	ENST00000343484.9	protein_coding	64063144,64066476,64066915,64068047,64069361,64069765,64070260,64070489,64071870,64072172	64063384,64066538,64067020,64068134,64069491,64069821,64070414,64070635,64071941,64072346	Gene ID= ENSG00000171703.16 TPM= 79.66 Transcript Type= protein_coding
chr20	64063196	64064123	64063196	64064123	+	ENST00000476113.1@TCEA2	ENST00000476113.1	protein_coding	64063196,64063892	64063384,64064123	Gene ID= ENSG00000171703.16 TPM= 12.75 Transcript Type= processed_transcript
chr20	64059143	64061130	64059143	64061130	-	transcript2875.chr20.nnic@NA	transcript2875.chr20.nnic	NA	64059143	64061130	Gene ID= novel_gene_chr20_2876 TPM= 4.25 Transcript Type= NA
chr20	64073181	64079988	64073181	64079988	-	ENST00000332298.9@RGS19	ENST00000332298.9	protein_coding	64079873,64076857,64076525,64074467,64074144,64073181	64079988,64076954,64076646,64074541,64074378,64074044	Gene ID= ENSG00000171700.13 TPM= 5.31 Transcript Type= protein_coding
chr20	64092077	64100643	64092077	64100643	+	transcript2882.chr20.nic@OPRL1	transcript2882.chr20.nic	protein_coding	64092077,64092688,64097802,64098276	64092116,64092953,64098157,64100643	Gene ID= ENSG00000125510.15 TPM= 2.12 Transcript Type= NA
chr20	64255741	64275653	64255741	64275653	+	ENST00000369758.8@PCMTD2	ENST00000369758.8	protein_coding	64255741,64259942,64264429,64265258,64267968,64273221	64255870,64260272,64264531,64265429,64268010,64275653	Gene ID= ENSG00000203880.11 TPM= 7.44 Transcript Type= protein_coding
chr20	64255768	64276230	64255768	64276230	+	ENST00000308824.10@PCMTD2	ENST00000308824.10	protein_coding	64255768,64259942,64264429,64265258,64267887,64273221	64255870,64260272,64264531,64265429,64268010,64276230	Gene ID= ENSG00000203880.11 TPM= 8.5 Transcript Type= protein_coding
chr21	5022494	5036771	5022494	5036771	+	ENST00000623960.3@FP565260.3	ENST00000623960.3	protein_coding	5022494,5025009,5026280,5027935,5032053,5033408,5034582	5022693,5025049,5026630,5028225,5032217,5033443,5036771	Gene ID= ENSG00000277117.4 TPM= 2.12 Transcript Type= protein_coding
chr21	5121933	5128442	5121933	5128442	-	transcript21.chr21.nic@FP565260.6	transcript21.chr21.nic	protein_coding	5128214,5127898,5125879,5121933	5128442,5127950,5125992,5124875	Gene ID= ENSG00000280071.3 TPM= 21.77 Transcript Type= NA
chr21	5116341	5128425	5116341	5128425	-	ENST00000620528.4@FP565260.6	ENST00000620528.4	protein_coding	5128214,5127898,5125879,5124756,5121711,5118691,5116341	5128425,5127950,5125992,5124875,5121803,5118847,5117231	Gene ID= ENSG00000280071.3 TPM= 256.51 Transcript Type= protein_coding
chr21	5097169	5099032	5097169	5099032	-	transcript31.chr21.nnic@NA	transcript31.chr21.nnic	NA	5097169	5099032	Gene ID= novel_gene_chr21_32 TPM= 3.19 Transcript Type= NA
chr21	5130871	5154734	5130871	5154734	-	ENST00000617716.3@FP565260.1	ENST00000617716.3	protein_coding	5154623,5152961,5148210,5147779,5147289,5146658,5146137,5144091,5143222,5142532,5141559,5141277,5140953,5139698,5137327,5135935,5135089,5133902,5133655,5133426,5130871	5154734,5153073,5148304,5147878,5147432,5146793,5146366,5144234,5143292,5142668,5141707,5141424,5141103,5139878,5137474,5136043,5135154,5134120,5133805,5133500,5131455	Gene ID= ENSG00000275464.4 TPM= 22.31 Transcript Type= protein_coding
chr21	5499151	5502542	5499151	5502542	-	ENST00000624261.1@LINC01670	ENST00000624261.1	lincRNA	5502369,5499999,5499151	5502542,5500101,5499809	Gene ID= ENSG00000279094.3 TPM= 6.37 Transcript Type= lincRNA
chr21	5499155	5502497	5499155	5502497	-	ENST00000624859.3@LINC01670	ENST00000624859.3	lincRNA	5502369,5500067,5499155	5502497,5500101,5499967	Gene ID= ENSG00000279094.3 TPM= 2.12 Transcript Type= lincRNA
chr21	6111134	6123739	6111134	6123739	+	ENST00000613488.2@CU639417.2	ENST00000613488.2	protein_coding	6111134,6112070,6112739,6116224,6116462,6116894,6117128,6117804,6118256,6118783,6119024,6119720,6120487,6121144	6111252,6112239,6112855,6116287,6116623,6117018,6117251,6118027,6118402,6118908,6119240,6120001,6120718,6123739	Gene ID= ENSG00000275993.2 TPM= 7.44 Transcript Type= protein_coding
chr21	6444869	6468040	6444869	6468040	-	ENST00000618024.4@CBSL	ENST00000618024.4	protein_coding	6467903,6464944,6463663,6460187,6457921,6457294,6457065,6456881,6455578,6454631,6453989,6452119,6450904,6450512,6449823,6448481,6445540,6444869	6468040,6465019,6463879,6460293,6458055,6457373,6457199,6456950,6455669,6454756,6454073,6452224,6450981,6450646,6449931,6448565,6445661,6445325	Gene ID= ENSG00000274276.4 TPM= 2.12 Transcript Type= protein_coding
chr21	6484623	6499200	6484623	6499200	-	ENST00000610664.4@U2AF1L5	ENST00000610664.4	protein_coding	6499129,6495993,6492131,6487363,6487107,6486322,6486138,6484623	6499200,6496080,6492197,6487412,6487205,6486455,6486230,6484916	Gene ID= ENSG00000275895.6 TPM= 44.08 Transcript Type= protein_coding
chr21	6484709	6499202	6484709	6499202	-	ENST00000619610.2@U2AF1L5	ENST00000619610.2	protein_coding	6499129,6495993,6493044,6487363,6487107,6486322,6486138,6484709	6499202,6496080,6493110,6487412,6487205,6486455,6486230,6484916	Gene ID= ENSG00000275895.6 TPM= 1.59 Transcript Type= protein_coding
chr21	6667304	6670695	6667304	6670695	-	ENST00000623324.1@CU638689.4	ENST00000623324.1	lincRNA	6670522,6668152,6667304	6670695,6668254,6667962	Gene ID= ENSG00000280145.3 TPM= 5.31 Transcript Type= lincRNA
chr21	6994374	6997765	6994374	6997765	-	ENST00000624728.1@CU634019.6	ENST00000624728.1	lincRNA	6997592,6995222,6994374	6997765,6995324,6995032	Gene ID= ENSG00000280018.3 TPM= 10.62 Transcript Type= lincRNA
chr21	6994374	6997737	6994374	6997737	-	ENST00000623347.1@CU634019.4	ENST00000623347.1	lincRNA	6997592,6995222,6994374	6997737,6995313,6995032	Gene ID= ENSG00000279313.1 TPM= 1.06 Transcript Type= lincRNA
chr21	7744971	7772246	7744971	7772246	+	ENST00000622934.3@SMIM11B	ENST00000622934.3	protein_coding	7744971,7748899,7754952,7769187,7771567	7745038,7748987,7755118,7769375,7772246	Gene ID= ENSG00000273590.4 TPM= 3.19 Transcript Type= protein_coding
chr21	7744975	7758627	7744975	7758627	+	ENST00000619874.4@SMIM11B	ENST00000619874.4	protein_coding	7744975,7748899,7754952,7758105	7745038,7748987,7755118,7758627	Gene ID= ENSG00000273590.4 TPM= 21.24 Transcript Type= protein_coding
chr21	8208973	8394730	8208973	8394730	+	transcript60.chr21.nnic@FP671120.1	transcript60.chr21.nnic	lincRNA	8208973,8253305,8392313	8209103,8253490,8394730	Gene ID= ENSG00000278996.1 TPM= 4405.98 Transcript Type= NA
chr21	8208756	8394739	8208756	8394739	+	transcript64.chr21.nnic@FP671120.1	transcript64.chr21.nnic	lincRNA	8208756,8253305,8392386	8209103,8253564,8394739	Gene ID= ENSG00000278996.1 TPM= 4356.59 Transcript Type= NA
chr21	8209008	8394734	8209008	8394734	+	transcript67.chr21.nnic@FP671120.1	transcript67.chr21.nnic	lincRNA	8209008,8253305,8392426	8209103,8253606,8394734	Gene ID= ENSG00000278996.1 TPM= 4352.26 Transcript Type= NA
chr21	9068360	9129772	9068360	9129772	-	transcript246.chr21.nnic@TEKT4P2	transcript246.chr21.nnic	transcribed_unprocessed_pseudogene	9129683,9127489,9070214,9069445,9068360	9129772,9127547,9070444,9069599,9068659	Gene ID= ENSG00000188681.11 TPM= 7.03 Transcript Type= NA
chr21	9068360	9071483	9068360	9071483	-	transcript250.chr21.nnic@TEKT4P2	transcript250.chr21.nnic	transcribed_unprocessed_pseudogene	9070790,9070214,9069445,9068360	9071483,9070444,9069599,9068659	Gene ID= ENSG00000188681.11 TPM= 7.97 Transcript Type= NA
chr21	9117185	9129772	9117185	9129772	-	transcript254.chr21.nnic@TEKT4P2	transcript254.chr21.nnic	transcribed_unprocessed_pseudogene	9129683,9127489,9120855,9117185	9129772,9127547,9121378,9118225	Gene ID= ENSG00000188681.11 TPM= 3.31 Transcript Type= NA
chr21	9120447	9129772	9120447	9129772	-	transcript255.chr21.nnic@TEKT4P2	transcript255.chr21.nnic	transcribed_unprocessed_pseudogene	9129683,9127492,9124362,9120447	9129772,9127547,9124424,9121378	Gene ID= ENSG00000188681.11 TPM= 2.12 Transcript Type= NA
chr21	9068360	9071143	9068360	9071143	-	transcript259.chr21.nnic@TEKT4P2	transcript259.chr21.nnic	transcribed_unprocessed_pseudogene	9070790,9069445,9068360	9071143,9070444,9068659	Gene ID= ENSG00000188681.11 TPM= 4.25 Transcript Type= NA
chr21	9068360	9129772	9068360	9129772	-	transcript260.chr21.nic@TEKT4P2	transcript260.chr21.nic	transcribed_unprocessed_pseudogene	9129683,9127489,9068360	9129772,9127547,9070444	Gene ID= ENSG00000188681.11 TPM= 8.62 Transcript Type= NA
chr21	9076424	9129772	9076424	9129772	-	transcript263.chr21.nnic@TEKT4P2	transcript263.chr21.nnic	transcribed_unprocessed_pseudogene	9129683,9127489,9076424	9129772,9127547,9077714	Gene ID= ENSG00000188681.11 TPM= 22.43 Transcript Type= NA
chr21	9081090	9129772	9081090	9129772	-	transcript268.chr21.nnic@TEKT4P2	transcript268.chr21.nnic	transcribed_unprocessed_pseudogene	9129683,9127489,9081090	9129772,9127547,9083887	Gene ID= ENSG00000188681.11 TPM= 11.81 Transcript Type= NA
chr21	9068361	9129752	9068361	9129752	-	ENST00000416067.5@TEKT4P2	ENST00000416067.5	transcribed_unprocessed_pseudogene	9129683,9127489,9070214,9068361	9129752,9127547,9070444,9069599	Gene ID= ENSG00000188681.11 TPM= 9.69 Transcript Type= processed_transcript
chr21	9073482	9076522	9073482	9076522	+	transcript276.chr21.nnic@NA	transcript276.chr21.nnic	NA	9073482	9076522	Gene ID= novel_gene_chr21_277 TPM= 6.37 Transcript Type= NA
chr21	9095638	9105086	9095638	9105086	+	transcript248.chr21.nnic@NA	transcript248.chr21.nnic	NA	9095638,9099329,9100221,9101710	9096950,9100172,9101408,9105086	Gene ID= novel_gene_chr21_249 TPM= 14.87 Transcript Type= NA
chr21	9356049	9358416	9356049	9358416	-	transcript285.chr21.nnic@NA	transcript285.chr21.nnic	NA	9356049	9358416	Gene ID= novel_gene_chr21_286 TPM= 3.19 Transcript Type= NA
chr21	14371115	14383187	14371115	14383187	-	ENST00000285667.3@HSPA13	ENST00000285667.3	protein_coding	14383095,14381203,14378199,14375652,14371115	14383187,14381543,14378412,14375819,14374284	Gene ID= ENSG00000155304.5 TPM= 20.18 Transcript Type= protein_coding
chr21	15730978	15735085	15730978	15735085	-	transcript307.chr21.nnic@NA	transcript307.chr21.nnic	NA	15730978	15735085	Gene ID= novel_gene_chr21_308 TPM= 16.99 Transcript Type= NA
chr21	15764318	15765563	15764318	15765563	-	transcript309.chr21.nnic@NA	transcript309.chr21.nnic	NA	15764318	15765563	Gene ID= novel_gene_chr21_310 TPM= 2.12 Transcript Type= NA
chr21	15815009	15816804	15815009	15816804	+	transcript305.chr21.nnic@NA	transcript305.chr21.nnic	NA	15815009	15816804	Gene ID= novel_gene_chr21_306 TPM= 2.12 Transcript Type= NA
chr21	16419398	16607137	16419398	16607137	+	transcript313.chr21.nic@MIR99AHG	transcript313.chr21.nic	lincRNA	16419398,16487490,16537379,16606994	16419741,16487538,16537439,16607137	Gene ID= ENSG00000215386.11 TPM= 4.25 Transcript Type= NA
chr21	16564287	16564503	16564287	16564503	-	transcript316.chr21.nnic@NA	transcript316.chr21.nnic	NA	16564287	16564503	Gene ID= novel_gene_chr21_317 TPM= 2.12 Transcript Type= NA
chr21	16607501	16610758	16607501	16610758	+	transcript314.chr21.nnic@NA	transcript314.chr21.nnic	NA	16607501	16610758	Gene ID= novel_gene_chr21_315 TPM= 2.12 Transcript Type= NA
chr21	16619904	16623232	16619904	16623232	-	transcript319.chr21.nnic@NA	transcript319.chr21.nnic	NA	16619904	16623232	Gene ID= novel_gene_chr21_320 TPM= 6.37 Transcript Type= NA
chr21	17512382	17570100	17512382	17570100	+	ENST00000284878.11@CXADR	ENST00000284878.11	protein_coding	17512382,17547027,17551749,17558976,17560702,17561338,17565428	17513172,17547193,17551953,17559131,17560824,17561476,17570100	Gene ID= ENSG00000154639.18 TPM= 123.21 Transcript Type= protein_coding
chr21	17512994	17516943	17512994	17516943	+	transcript336.chr21.nnic@NA	transcript336.chr21.nnic	NA	17512994	17516943	Gene ID= novel_gene_chr21_337 TPM= 2.12 Transcript Type= NA
chr21	17593653	17612947	17593653	17612947	-	ENST00000348354.6@BTG3	ENST00000348354.6	protein_coding	17612699,17608972,17604860,17598617,17593653	17612947,17609152,17604997,17598824,17594332	Gene ID= ENSG00000154640.14 TPM= 18.06 Transcript Type= protein_coding
chr21	17593653	17612844	17593653	17612844	-	ENST00000339775.10@BTG3	ENST00000339775.10	protein_coding	17612699,17608972,17604860,17604145,17598617,17593653	17612844,17609152,17604997,17604276,17598824,17594332	Gene ID= ENSG00000154640.14 TPM= 1.06 Transcript Type= protein_coding
chr21	17611773	17614113	17611773	17614113	+	ENST00000630155.1@BTG3-AS1	ENST00000630155.1	processed_transcript	17611773	17614113	Gene ID= ENSG00000280594.1 TPM= 1.06 Transcript Type= retained_intron
chr21	17788967	17819386	17788967	17819386	-	ENST00000284881.8@C21orf91	ENST00000284881.8	protein_coding	17819303,17818192,17796582,17795208,17788967	17819386,17818325,17797118,17795270,17793581	Gene ID= ENSG00000154642.10 TPM= 9.56 Transcript Type= protein_coding
chr21	25585656	25607517	25585656	25607517	-	ENST00000352957.8@MRPL39	ENST00000352957.8	protein_coding	25607403,25606449,25603796,25601368,25599799,25597302,25593893,25592812,25588835,25585656	25607517,25606655,25603935,25601467,25599866,25597414,25593958,25592965,25588882,25585754	Gene ID= ENSG00000154719.13 TPM= 76.48 Transcript Type= protein_coding
chr21	25639272	25714573	25639272	25714573	+	ENST00000400532.5@JAM2	ENST00000400532.5	protein_coding	25639272,25683883,25689866,25693756,25698677,25702170,25705979,25709434,25712340,25714231	25639888,25683948,25689973,25693908,25698879,25702269,25706086,25709449,25712382,25714573	Gene ID= ENSG00000154721.14 TPM= 1.06 Transcript Type= protein_coding
chr21	25639272	25717562	25639272	25717562	+	ENST00000480456.5@JAM2	ENST00000480456.5	protein_coding	25639272,25683883,25689866,25693756,25698677,25702170,25705979,25709434,25712340,25714640	25639888,25683948,25689973,25693908,25698879,25702269,25706086,25709449,25712382,25717562	Gene ID= ENSG00000154721.14 TPM= 20.71 Transcript Type= protein_coding
chr21	25715987	25719177	25715987	25719177	-	transcript394.chr21.nnic@NA	transcript394.chr21.nnic	NA	25715987	25719177	Gene ID= novel_gene_chr21_395 TPM= 14.34 Transcript Type= NA
chr21	25724480	25734904	25724480	25734904	-	ENST00000400094.5@ATP5J	ENST00000400094.5	protein_coding	25734853,25734333,25729631,25725226,25724480	25734904,25734375,25729801,25725350,25724677	Gene ID= ENSG00000154723.12 TPM= 6.53 Transcript Type= protein_coding
chr21	25724480	25735673	25724480	25735673	-	ENST00000400093.3@ATP5J	ENST00000400093.3	protein_coding	25734989,25729631,25725226,25724480	25735673,25729801,25725350,25724677	Gene ID= ENSG00000154723.12 TPM= 26.54 Transcript Type= protein_coding
chr21	25724480	25734972	25724480	25734972	-	ENST00000284971.7@ATP5J	ENST00000284971.7	protein_coding	25734853,25729631,25725226,25724480	25734972,25729801,25725350,25724677	Gene ID= ENSG00000154723.12 TPM= 516.37 Transcript Type= protein_coding
chr21	25724480	25735639	25724480	25735639	-	ENST00000400090.7@ATP5J	ENST00000400090.7	protein_coding	25735487,25729631,25725226,25724480	25735639,25729801,25725350,25724677	Gene ID= ENSG00000154723.12 TPM= 7.59 Transcript Type= protein_coding
chr21	25724480	25735646	25724480	25735646	-	ENST00000400087.7@ATP5J	ENST00000400087.7	protein_coding	25735315,25729631,25725226,25724480	25735646,25729801,25725350,25724677	Gene ID= ENSG00000154723.12 TPM= 6.53 Transcript Type= protein_coding
chr21	25724480	25735033	25724480	25735033	-	ENST00000457143.6@ATP5J	ENST00000457143.6	protein_coding	25734939,25729631,25725226,25724480	25735033,25729801,25725350,25724677	Gene ID= ENSG00000154723.12 TPM= 7.59 Transcript Type= protein_coding
chr21	25734570	25772460	25734570	25772460	+	ENST00000354828.7@GABPA	ENST00000354828.7	protein_coding	25734570,25741573,25745210,25749036,25751989,25758010,25762312,25764210,25764595,25769004	25735070,25741675,25745354,25749120,25752234,25758204,25762365,25764350,25764787,25772460	Gene ID= ENSG00000154727.10 TPM= 5.84 Transcript Type= protein_coding
chr21	25735384	25772460	25735384	25772460	+	ENST00000400075.3@GABPA	ENST00000400075.3	protein_coding	25735384,25741573,25745210,25749036,25751989,25758010,25762312,25764210,25764595,25769004	25735578,25741675,25745354,25749120,25752234,25758204,25762365,25764350,25764787,25772460	Gene ID= ENSG00000154727.10 TPM= 6.9 Transcript Type= protein_coding
chr21	25945524	26170767	25945524	26170767	-	transcript404.chr21.nic@APP	transcript404.chr21.nic	protein_coding	26170564,26111979,26089943,26053236,26051000,26021840,26000015,25997360,25982344,25975954,25975070,25955627,25954590,25945524	26170767,26112146,26090072,26053348,26051193,26022042,26000182,25997416,25982477,25976028,25975228,25955755,25954689,25945975	Gene ID= ENSG00000142192.20 TPM= 3.19 Transcript Type= NA
chr21	26466209	26573284	26466209	26573284	-	ENST00000299340.8@CYYR1	ENST00000299340.8	protein_coding	26572868,26566266,26480272,26466209	26573284,26566368,26480429,26468631	Gene ID= ENSG00000166265.11 TPM= 36.11 Transcript Type= protein_coding
chr21	26482831	26573203	26482831	26573203	-	transcript421.chr21.nnic@CYYR1	transcript421.chr21.nnic	protein_coding	26572868,26566266,26482831	26573203,26566368,26483407	Gene ID= ENSG00000166265.11 TPM= 2.12 Transcript Type= NA
chr21	26835747	26845409	26835747	26845409	-	ENST00000284984.7@ADAMTS1	ENST00000284984.7	protein_coding	26844225,26842339,26841858,26840998,26840276,26839875,26839587,26838439,26835747	26845409,26842685,26841990,26841165,26840562,26840061,26839762,26838614,26838278	Gene ID= ENSG00000154734.14 TPM= 138.08 Transcript Type= protein_coding
chr21	26836287	26845412	26836287	26845412	-	transcript429.chr21.nic@ADAMTS1	transcript429.chr21.nic	protein_coding	26844225,26842339,26841858,26840998,26839875,26839587,26838439,26836287	26845412,26842685,26841990,26841165,26840562,26839762,26838614,26838278	Gene ID= ENSG00000154734.14 TPM= 16.28 Transcript Type= NA
chr21	28872191	28885371	28872191	28885371	-	ENST00000460212.1@N6AMT1	ENST00000460212.1	protein_coding	28885212,28882985,28882160,28879870,28878192,28876312,28872191	28885371,28883071,28882250,28879953,28878333,28876491,28872739	Gene ID= ENSG00000156239.11 TPM= 1.06 Transcript Type= nonsense_mediated_decay
chr21	28947543	28992913	28947543	28992913	-	transcript446.chr21.nic@LTN1	transcript446.chr21.nic	protein_coding	28992764,28986731,28986139,28984692,28982316,28981119,28971271,28970552,28969466,28966370,28965865,28960517,28959458,28958386,28957332,28956762,28953217,28952160,28947543	28992913,28986934,28986237,28984922,28982368,28981299,28971444,28970742,28969601,28967179,28965906,28960706,28959697,28958539,28957476,28956948,28953376,28952264,28947606	Gene ID= ENSG00000198862.13 TPM= 2.12 Transcript Type= NA
chr21	29004384	29019378	29004384	29019378	-	ENST00000493196.1@RWDD2B	ENST00000493196.1	protein_coding	29019211,29008395,29008240,29007761,29004384	29019378,29008621,29008307,29008123,29006651	Gene ID= ENSG00000156253.6 TPM= 15.93 Transcript Type= protein_coding
chr21	29005759	29019352	29005759	29019352	-	ENST00000286777.6@RWDD2B	ENST00000286777.6	protein_coding	29019211,29008395,29007761,29005759	29019352,29008621,29008123,29006651	Gene ID= ENSG00000156253.6 TPM= 1.59 Transcript Type= processed_transcript
chr21	29005759	29019359	29005759	29019359	-	ENST00000472184.1@RWDD2B	ENST00000472184.1	protein_coding	29019211,29008240,29007761,29005759	29019359,29008621,29008123,29006651	Gene ID= ENSG00000156253.6 TPM= 3.72 Transcript Type= retained_intron
chr21	29024255	29024890	29024255	29024890	-	ENST00000608809.1@AF129075.2	ENST00000608809.1	antisense_RNA	29024255	29024890	Gene ID= ENSG00000273254.1 TPM= 2.12 Transcript Type= antisense_RNA
chr21	29024639	29054488	29024639	29054488	+	transcript463.chr21.nic@USP16	transcript463.chr21.nic	protein_coding	29024639,29025709,29027873,29030595,29034837,29036271,29037279,29038335,29039026,29039481,29040609,29042013,29042472,29043423,29046667,29048761,29050092,29053802,29054066	29024777,29025771,29027974,29030773,29034940,29036374,29037463,29038430,29039156,29039568,29040687,29042104,29042528,29043599,29047321,29048855,29050178,29053958,29054488	Gene ID= ENSG00000156256.14 TPM= 7.7 Transcript Type= NA
chr21	29024629	29054488	29024629	29054488	+	ENST00000399976.6@USP16	ENST00000399976.6	protein_coding	29024629,29027873,29030595,29034837,29036271,29037276,29038335,29039026,29039481,29040609,29042013,29042472,29043423,29046667,29048761,29050092,29053802,29054066	29024777,29027974,29030773,29034940,29036374,29037463,29038430,29039156,29039568,29040687,29042104,29042528,29043599,29047321,29048855,29050178,29053958,29054488	Gene ID= ENSG00000156256.14 TPM= 3.45 Transcript Type= protein_coding
chr21	29024629	29054488	29024629	29054488	+	ENST00000399975.7@USP16	ENST00000399975.7	protein_coding	29024629,29027873,29030595,29034837,29036271,29037279,29038335,29039026,29039481,29040609,29042013,29042472,29043423,29046667,29048761,29050092,29053802,29054066	29024777,29027974,29030773,29034940,29036374,29037463,29038430,29039156,29039568,29040687,29042104,29042528,29043599,29047321,29048855,29050178,29053958,29054488	Gene ID= ENSG00000156256.14 TPM= 2.92 Transcript Type= protein_coding
chr21	29024651	29054488	29024651	29054488	+	ENST00000334352.8@USP16	ENST00000334352.8	protein_coding	29024651,29025709,29027873,29030595,29034837,29036271,29037276,29038335,29039026,29039481,29040609,29042013,29042472,29043423,29046667,29048761,29050092,29053802,29054066	29024777,29025771,29027974,29030773,29034940,29036374,29037463,29038430,29039156,29039568,29040687,29042104,29042528,29043599,29047321,29048855,29050178,29053958,29054488	Gene ID= ENSG00000156256.14 TPM= 19.92 Transcript Type= protein_coding
chr21	29056324	29073797	29056324	29073797	-	ENST00000286788.8@CCT8	ENST00000286788.8	protein_coding	29073531,29070247,29069423,29067556,29066891,29066716,29064968,29063352,29062490,29062328,29062128,29061496,29061253,29060541,29056324	29073797,29070337,29069502,29067705,29067071,29066777,29065105,29063530,29062556,29062415,29062243,29061567,29061417,29060660,29056552	Gene ID= ENSG00000156261.12 TPM= 219.87 Transcript Type= protein_coding
chr21	29130384	29175888	29130384	29175888	+	transcript480.chr21.nnic@MAP3K7CL	transcript480.chr21.nnic	protein_coding	29130384,29130795,29133306,29149189,29159941,29174712	29130512,29130923,29133414,29149250,29160056,29175888	Gene ID= ENSG00000156265.15 TPM= 17.79 Transcript Type= NA
chr21	29130485	29175889	29130485	29175889	+	ENST00000399928.5@MAP3K7CL	ENST00000399928.5	protein_coding	29130485,29133306,29149189,29159941,29174712	29130923,29133414,29149250,29160056,29175889	Gene ID= ENSG00000156265.15 TPM= 167.56 Transcript Type= protein_coding
chr21	29130666	29175884	29130666	29175884	+	transcript488.chr21.nnic@MAP3K7CL	transcript488.chr21.nnic	protein_coding	29130666,29133306,29149189,29174712	29130923,29133414,29149250,29175884	Gene ID= ENSG00000156265.15 TPM= 8.76 Transcript Type= NA
chr21	29298871	29346148	29298871	29346148	+	ENST00000286800.7@BACH1	ENST00000286800.7	protein_coding	29298871,29321221,29326059,29329487,29342399	29298953,29321514,29327393,29329693,29346148	Gene ID= ENSG00000156273.15 TPM= 5.31 Transcript Type= protein_coding
chr21	29327129	29630751	29327129	29630751	+	ENST00000422809.5@BACH1	ENST00000422809.5	protein_coding	29327129,29329487,29582312,29597570,29630539	29327393,29329693,29582351,29597694,29630751	Gene ID= ENSG00000156273.15 TPM= 1.06 Transcript Type= protein_coding
chr21	31659666	31668931	31659666	31668931	+	ENST00000389995.4@SOD1	ENST00000389995.4	protein_coding	31659666,31663790,31666449,31667258,31668471	31659784,31663886,31666518,31667375,31668931	Gene ID= ENSG00000142168.14 TPM= 5.49 Transcript Type= protein_coding
chr21	31659709	31668931	31659709	31668931	+	ENST00000470944.1@SOD1	ENST00000470944.1	protein_coding	31659709,31663790,31666449,31667258,31668471	31660708,31663886,31666518,31667375,31668931	Gene ID= ENSG00000142168.14 TPM= 3.9 Transcript Type= processed_transcript
chr21	31659622	31668931	31659622	31668931	+	ENST00000270142.10@SOD1	ENST00000270142.10	protein_coding	31659622,31663790,31666449,31667258,31668471	31659841,31663886,31666518,31667375,31668931	Gene ID= ENSG00000142168.14 TPM= 302.9 Transcript Type= protein_coding
chr21	31671033	31732075	31671033	31732075	-	ENST00000286835.11@SCAF4	ENST00000286835.11	protein_coding	31731663,31706274,31705423,31703765,31702244,31701776,31700995,31696569,31696113,31694813,31694204,31693294,31692349,31691817,31690797,31688307,31685568,31685398,31685049,31671033	31732075,31706357,31705467,31703926,31702379,31701918,31701171,31696750,31696221,31694980,31694289,31693484,31692449,31691930,31690953,31688464,31685733,31685484,31685240,31672354	Gene ID= ENSG00000156304.14 TPM= 8.5 Transcript Type= protein_coding
chr21	31671033	31732075	31671033	31732075	-	ENST00000399804.5@SCAF4	ENST00000399804.5	protein_coding	31731663,31706274,31705423,31703765,31702244,31701776,31700995,31696569,31696113,31694813,31694204,31693294,31692349,31691817,31690797,31688307,31685568,31685398,31685049,31671033	31732075,31706357,31705467,31703926,31702379,31701918,31701171,31696750,31696221,31694980,31694289,31693484,31692449,31691930,31690953,31688464,31685733,31685484,31685174,31672354	Gene ID= ENSG00000156304.14 TPM= 5.31 Transcript Type= protein_coding
chr21	32268219	32279069	32268219	32279069	-	ENST00000290130.3@MIS18A	ENST00000290130.3	protein_coding	32278681,32274830,32270407,32269707,32268219	32279069,32274896,32270529,32269803,32269117	Gene ID= ENSG00000159055.3 TPM= 6.37 Transcript Type= protein_coding
chr21	32311018	32393026	32311018	32393026	-	ENST00000382751.3@URB1	ENST00000382751.3	protein_coding	32392769,32385545,32384313,32383422,32378445,32375398,32373647,32372507,32368403,32366618,32363156,32361892,32361007,32359796,32357537,32355449,32354859,32353933,32352710,32350704,32349304,32346956,32345374,32344570,32341466,32338707,32337404,32337094,32334163,32333317,32325229,32324491,32322478,32321801,32320531,32319217,32317676,32316466,32311018	32393026,32385684,32384464,32383554,32378541,32375483,32373772,32372631,32368598,32366755,32363329,32362021,32361123,32359908,32357656,32355565,32354997,32354103,32352906,32350922,32349483,32347811,32345575,32344756,32341524,32338900,32337514,32337157,32334334,32333419,32325389,32324602,32322584,32321944,32320640,32319414,32317917,32317065,32315099	Gene ID= ENSG00000142207.6 TPM= 2.12 Transcript Type= protein_coding
chr21	32393130	32393960	32393130	32393960	+	ENST00000534991.3@URB1-AS1	ENST00000534991.3	lincRNA	32393130	32393960	Gene ID= ENSG00000256073.3 TPM= 7.44 Transcript Type= lincRNA
chr21	32411314	32412604	32411314	32412604	-	transcript533.chr21.nnic@NA	transcript533.chr21.nnic	NA	32411314	32412604	Gene ID= novel_gene_chr21_534 TPM= 2.12 Transcript Type= NA
chr21	32412437	32515389	32412437	32515389	+	ENST00000437338.5@EVA1C	ENST00000437338.5	protein_coding	32412437,32457597,32467696,32495027,32501415,32503926,32514814	32413013,32457720,32467848,32495170,32501495,32504015,32515389	Gene ID= ENSG00000166979.12 TPM= 2.3 Transcript Type= nonsense_mediated_decay
chr21	32412712	32515389	32412712	32515389	+	transcript529.chr21.nic@EVA1C	transcript529.chr21.nic	protein_coding	32412712,32467696,32495027,32501415,32503926,32514814	32413013,32467848,32495170,32501486,32504015,32515389	Gene ID= ENSG00000166979.12 TPM= 3.37 Transcript Type= NA
chr21	32412553	32515389	32412553	32515389	+	ENST00000457807.5@EVA1C	ENST00000457807.5	protein_coding	32412553,32467696,32495027,32501415,32503926,32514814	32413013,32467848,32495170,32501538,32504015,32515389	Gene ID= ENSG00000166979.12 TPM= 1.24 Transcript Type= nonsense_mediated_decay
chr21	32412381	32515389	32412381	32515389	+	ENST00000300255.6@EVA1C	ENST00000300255.6	protein_coding	32412381,32453312,32457597,32467696,32495027,32501415,32503926,32514814	32413013,32453508,32457720,32467848,32495170,32501495,32504015,32515389	Gene ID= ENSG00000166979.12 TPM= 9.74 Transcript Type= protein_coding
chr21	32412702	32515389	32412702	32515389	+	ENST00000382699.7@EVA1C	ENST00000382699.7	protein_coding	32412702,32453312,32457597,32467696,32495027,32501415,32503926,32514814	32413013,32453508,32457720,32467848,32495170,32501486,32504015,32515389	Gene ID= ENSG00000166979.12 TPM= 5.49 Transcript Type= protein_coding
chr21	32601667	32612554	32601667	32612554	-	transcript548.chr21.nnic@AP000275.2	transcript548.chr21.nnic	protein_coding	32612303,32612105,32609838,32607649,32604125,32601667	32612554,32612261,32610005,32607716,32604283,32603292	Gene ID= ENSG00000265590.9 TPM= 4.25 Transcript Type= NA
chr21	32601667	32612852	32601667	32612852	-	transcript540.chr21.nnic@C21orf59	transcript540.chr21.nnic	protein_coding	32612303,32612105,32609838,32607649,32604125,32603161,32602272,32601667	32612852,32612261,32610005,32607716,32604283,32603292,32602367,32601973	Gene ID= ENSG00000159079.18 TPM= 23.9 Transcript Type= NA
chr21	32601667	32612866	32601667	32612866	-	ENST00000290155.7@C21orf59	ENST00000290155.7	protein_coding	32612105,32609838,32607649,32604125,32603161,32602272,32601667	32612866,32610005,32607716,32604283,32603292,32602367,32601973	Gene ID= ENSG00000159079.18 TPM= 29.21 Transcript Type= protein_coding
chr21	32733899	32771858	32733899	32771858	-	ENST00000331923.8@PAXBP1	ENST00000331923.8	protein_coding	32771326,32769814,32764348,32762096,32761059,32759777,32759080,32755230,32751119,32750917,32748499,32745574,32744792,32743678,32743248,32738173,32737254,32733899	32771858,32769942,32764524,32762317,32761162,32759994,32759269,32755353,32751218,32751032,32748698,32745718,32744913,32743754,32743314,32738319,32737408,32735067	Gene ID= ENSG00000159086.14 TPM= 4.25 Transcript Type= protein_coding
chr21	32757307	32771753	32757307	32771753	-	transcript563.chr21.nic@PAXBP1	transcript563.chr21.nic	protein_coding	32771326,32769814,32764348,32762096,32761059,32759777,32757307	32771753,32769942,32764524,32762317,32761162,32759994,32759269	Gene ID= ENSG00000159086.14 TPM= 2.12 Transcript Type= NA
chr21	32734820	32771687	32734820	32771687	-	ENST00000443785.5@PAXBP1	ENST00000443785.5	protein_coding	32771326,32769814,32764348,32762096,32761059,32759777,32759080,32755213,32751119,32750917,32748499,32745574,32744792,32743678,32743248,32738173,32737254,32734820	32771687,32769942,32764524,32762317,32761162,32759994,32759269,32755353,32751218,32751032,32748698,32745718,32744913,32743754,32743314,32738319,32737408,32735067	Gene ID= ENSG00000159086.14 TPM= 1.06 Transcript Type= nonsense_mediated_decay
chr21	32772100	32798969	32772100	32798969	+	ENST00000382375.8@C21orf62-AS1	ENST00000382375.8	antisense_RNA	32772100,32784797,32788612,32796939	32772308,32784919,32788701,32798969	Gene ID= ENSG00000205930.8 TPM= 1.06 Transcript Type= antisense_RNA
chr21	33229901	33262756	33229901	33262756	+	ENST00000382264.7@IFNAR2	ENST00000382264.7	protein_coding	33229901,33241886,33243673,33244951,33246718,33248709,33252662,33260597,33262561	33230216,33241977,33243714,33245074,33246890,33248854,33252830,33260727,33262756	Gene ID= ENSG00000159110.19 TPM= 11.68 Transcript Type= protein_coding
chr21	33266358	33297234	33266358	33297234	+	ENST00000290200.6@IL10RB	ENST00000290200.6	protein_coding	33266358,33268394,33276596,33279752,33283094,33288104,33296184	33266514,33268517,33276753,33279918,33283241,33288261,33297234	Gene ID= ENSG00000243646.9 TPM= 35.05 Transcript Type= protein_coding
chr21	33324904	33359862	33324904	33359862	+	ENST00000270139.7@IFNAR1	ENST00000270139.7	protein_coding	33324904,33335524,33340999,33343268,33343535,33345246,33349091,33349389,33352758,33353638,33355316	33325131,33335647,33341174,33343422,33343676,33345360,33349290,33349543,33352908,33353783,33359862	Gene ID= ENSG00000142166.12 TPM= 23.37 Transcript Type= protein_coding
chr21	33403432	33437521	33403432	33437521	+	ENST00000381995.5@IFNGR2	ENST00000381995.5	protein_coding	33403432,33410836,33414888,33421480,33426884,33432177,33432714,33436828	33403616,33410892,33415020,33421685,33427032,33432336,33432871,33437521	Gene ID= ENSG00000159128.14 TPM= 6.19 Transcript Type= protein_coding
chr21	33402896	33437521	33402896	33437521	+	ENST00000290219.10@IFNGR2	ENST00000290219.10	protein_coding	33402896,33414888,33421480,33426884,33432177,33432714,33436828	33403616,33415020,33421685,33427032,33432336,33432871,33437521	Gene ID= ENSG00000159128.14 TPM= 104.97 Transcript Type= protein_coding
chr21	33423830	33427137	33423830	33427137	-	transcript623.chr21.nnic@NA	transcript623.chr21.nnic	NA	33423830	33427137	Gene ID= novel_gene_chr21_624 TPM= 2.12 Transcript Type= NA
chr21	33449135	33480011	33449135	33480011	-	ENST00000542230.6@TMEM50B	ENST00000542230.6	protein_coding	33479838,33468787,33467010,33465342,33460413,33455727,33449135	33480011,33468926,33467122,33465409,33460505,33455784,33450863	Gene ID= ENSG00000142188.16 TPM= 90.1 Transcript Type= protein_coding
chr21	33449138	33479952	33449138	33479952	-	transcript617.chr21.nnic@TMEM50B	transcript617.chr21.nnic	protein_coding	33479838,33468787,33467010,33465342,33460413,33449138	33479952,33468926,33467122,33465409,33460505,33450863	Gene ID= ENSG00000142188.16 TPM= 3.72 Transcript Type= NA
chr21	33432485	33479943	33432485	33479943	-	ENST00000420455.5@TMEM50B	ENST00000420455.5	protein_coding	33479838,33468787,33467010,33465342,33460413,33455727,33448782,33439214,33432485	33479943,33468926,33467122,33465409,33460505,33455784,33450863,33439297,33432802	Gene ID= ENSG00000142188.16 TPM= 3.54 Transcript Type= nonsense_mediated_decay
chr21	33442361	33444818	33442361	33444818	+	transcript621.chr21.nnic@NA	transcript621.chr21.nnic	NA	33442361	33444818	Gene ID= novel_gene_chr21_622 TPM= 3.19 Transcript Type= NA
chr21	33488190	33491720	33488190	33491720	-	ENST00000381947.3@DNAJC28	ENST00000381947.3	protein_coding	33491602,33488190	33491720,33489424	Gene ID= ENSG00000177692.11 TPM= 1.06 Transcript Type= protein_coding
chr21	33503933	33542883	33503933	33542883	-	transcript631.chr21.nnic@GART	transcript631.chr21.nnic	protein_coding	33542548,33539171,33535225,33534579,33532345,33531489,33530759,33528850,33528519,33528167,33524769,33522188,33520906,33520364,33517357,33516989,33511252,33509783,33505974,33505561,33504412,33503933	33542883,33539356,33535320,33534753,33532456,33531557,33530884,33528937,33528604,33528335,33525000,33522282,33521015,33520562,33517608,33517141,33511458,33509920,33506104,33505702,33504527,33504315	Gene ID= ENSG00000159131.16 TPM= 11.15 Transcript Type= NA
chr21	33531570	33542117	33531570	33542117	-	transcript661.chr21.nic@GART	transcript661.chr21.nic	protein_coding	33542065,33539171,33535225,33534579,33531570	33542117,33539356,33535320,33534753,33532456	Gene ID= ENSG00000159131.16 TPM= 3.19 Transcript Type= NA
chr21	33503931	33542138	33503931	33542138	-	ENST00000381815.8@GART	ENST00000381815.8	protein_coding	33542065,33539171,33535225,33534579,33532345,33531489,33530759,33528850,33528519,33528167,33524769,33522188,33520906,33520364,33517357,33516989,33511252,33509783,33505974,33505561,33504412,33503931	33542138,33539356,33535320,33534753,33532456,33531557,33530884,33528937,33528604,33528335,33525000,33522282,33521015,33520562,33517608,33517141,33511458,33509920,33506104,33505702,33504527,33504315	Gene ID= ENSG00000159131.16 TPM= 28.15 Transcript Type= protein_coding
chr21	33524009	33542114	33524009	33542114	-	ENST00000361093.9@GART	ENST00000361093.9	protein_coding	33542065,33539171,33535225,33534579,33532345,33531489,33530759,33528850,33528519,33528167,33524009	33542114,33539356,33535320,33534753,33532456,33531557,33530884,33528937,33528604,33528335,33525000	Gene ID= ENSG00000159131.16 TPM= 30.8 Transcript Type= protein_coding
chr21	33543009	33577481	33543009	33577481	+	transcript639.chr21.nic@SON	transcript639.chr21.nic	protein_coding	33543009,33546213,33549476,33557156,33559230,33559587,33567157,33568971,33573308,33575596,33575778,33576418	33543169,33546379,33555391,33557316,33559376,33559775,33567267,33569087,33573455,33575667,33575893,33577481	Gene ID= ENSG00000159140.19 TPM= 19.12 Transcript Type= NA
chr21	33543009	33577481	33543009	33577481	+	transcript642.chr21.nic@SON	transcript642.chr21.nic	protein_coding	33543009,33546213,33557156,33559230,33559587,33567157,33568971,33573308,33575596,33575778,33576418	33543169,33546379,33557316,33559376,33559775,33567267,33569087,33573455,33575667,33575893,33577481	Gene ID= ENSG00000159140.19 TPM= 9.56 Transcript Type= NA
chr21	33542618	33577481	33542618	33577481	+	ENST00000356577.8@SON	ENST00000356577.8	protein_coding	33542618,33546213,33549476,33557156,33559230,33559587,33567157,33568971,33573308,33575596,33575778,33576365	33543169,33546379,33555391,33557316,33559376,33559775,33567267,33569087,33573455,33575667,33575893,33577481	Gene ID= ENSG00000159140.19 TPM= 106.22 Transcript Type= protein_coding
chr21	33577905	33588708	33577905	33588708	-	ENST00000303071.9@DONSON	ENST00000303071.9	protein_coding	33588321,33587522,33585978,33584590,33583488,33582165,33581951,33581302,33579350,33577905	33588708,33587602,33586181,33584768,33583666,33582246,33582055,33581500,33579562,33578444	Gene ID= ENSG00000159147.17 TPM= 3.19 Transcript Type= protein_coding
chr21	33589341	33641755	33589341	33641755	-	transcript670.chr21.nic@CRYZL1	transcript670.chr21.nic	protein_coding	33641681,33641179,33631486,33624683,33621996,33616706,33613538,33603404,33602234,33599150,33597280,33595731,33591162,33589341	33641755,33641305,33631557,33624760,33622068,33616750,33613606,33603537,33602345,33599248,33597401,33595836,33591207,33589921	Gene ID= ENSG00000205758.11 TPM= 4.25 Transcript Type= NA
chr21	33589341	33641760	33589341	33641760	-	ENST00000381554.7@CRYZL1	ENST00000381554.7	protein_coding	33641681,33631486,33624683,33621996,33616706,33613538,33603404,33602234,33599150,33597280,33595731,33591162,33589341	33641760,33631557,33624760,33622068,33616750,33613606,33603537,33602345,33599248,33597401,33595836,33591207,33589921	Gene ID= ENSG00000205758.11 TPM= 14.87 Transcript Type= protein_coding
chr21	33594643	33641755	33594643	33641755	-	transcript678.chr21.nic@CRYZL1	transcript678.chr21.nic	protein_coding	33641681,33641179,33631486,33624683,33621996,33616706,33613538,33603404,33602234,33599150,33597280,33595731,33594643	33641755,33641305,33631557,33624760,33622068,33616750,33613606,33603537,33602345,33599285,33597401,33595836,33595614	Gene ID= ENSG00000205758.11 TPM= 3.19 Transcript Type= NA
chr21	33594643	33641759	33594643	33641759	-	transcript681.chr21.nic@CRYZL1	transcript681.chr21.nic	protein_coding	33641681,33631486,33624683,33621996,33616706,33613538,33603404,33602234,33599150,33597280,33595731,33594643	33641759,33631557,33624760,33622068,33616750,33613606,33603537,33602345,33599248,33597401,33595836,33595614	Gene ID= ENSG00000205758.11 TPM= 4.25 Transcript Type= NA
chr21	33594662	33642338	33594662	33642338	-	ENST00000420072.5@CRYZL1	ENST00000420072.5	protein_coding	33641681,33631486,33624683,33621996,33616706,33613538,33603404,33602234,33599150,33597280,33595731,33594662	33642338,33631557,33624760,33622068,33616750,33613606,33603537,33602345,33599285,33597401,33595836,33595614	Gene ID= ENSG00000205758.11 TPM= 1.06 Transcript Type= nonsense_mediated_decay
chr21	33589467	33641747	33589467	33641747	-	ENST00000381540.7@CRYZL1	ENST00000381540.7	protein_coding	33641681,33631486,33624683,33621996,33616706,33613538,33603404,33602234,33599150,33597280,33595731,33591162,33589467	33641747,33631557,33624760,33622068,33616750,33613606,33603537,33602345,33599248,33597401,33595836,33591211,33589921	Gene ID= ENSG00000205758.11 TPM= 9.56 Transcript Type= protein_coding
chr21	33592101	33592610	33592101	33592610	-	transcript693.chr21.nnic@NA	transcript693.chr21.nnic	NA	33592101	33592610	Gene ID= novel_gene_chr21_694 TPM= 2.12 Transcript Type= NA
chr21	33642412	33794434	33642412	33794434	+	transcript703.chr21.nic@ITSN1	transcript703.chr21.nic	protein_coding	33642412,33718797,33721178,33722588,33735044,33750143,33751810,33755297,33761923,33765875,33767713,33772061,33774729,33774968,33781461,33781994,33794341	33642713,33718856,33721270,33722651,33735204,33750322,33751906,33755397,33761986,33766012,33767828,33772323,33774878,33775108,33781548,33782133,33794434	Gene ID= ENSG00000205726.14 TPM= 10.62 Transcript Type= NA
chr21	33642496	33838498	33642496	33838498	+	ENST00000399352.5@ITSN1	ENST00000399352.5	protein_coding	33642496,33718797,33721178,33722588,33735044,33750143,33751810,33755297,33761923,33765875,33767713,33772061,33774729,33774968,33781461,33781994,33794341,33797379,33799808,33810975,33813913,33818267,33819241,33823487,33826818,33829624,33834307,33836441,33836987	33642713,33718856,33721270,33722651,33735204,33750322,33751906,33755397,33761986,33766012,33767828,33772323,33774878,33775108,33781548,33782133,33794468,33797608,33799929,33811222,33814072,33818472,33819323,33823653,33826863,33829745,33834424,33836632,33838498	Gene ID= ENSG00000205726.14 TPM= 4.25 Transcript Type= protein_coding
chr21	33642498	33838496	33642498	33838496	+	ENST00000399349.5@ITSN1	ENST00000399349.5	protein_coding	33642498,33718797,33721178,33722588,33735044,33750143,33751810,33755297,33761923,33765875,33767713,33772061,33774729,33774968,33781461,33781994,33794341,33797379,33799808,33810975,33813913,33818267,33819241,33829624,33834307,33836441,33836987	33642713,33718856,33721270,33722651,33735204,33750322,33751906,33755397,33761986,33766012,33767828,33772323,33774878,33775108,33781548,33782133,33794468,33797608,33799929,33811222,33814072,33818472,33819323,33829745,33834424,33836632,33838496	Gene ID= ENSG00000205726.14 TPM= 4.25 Transcript Type= protein_coding
chr21	33903453	33915980	33903453	33915980	-	ENST00000290299.6@ATP5O	ENST00000290299.6	protein_coding	33915728,33914450,33912289,33909082,33907341,33903935,33903453	33915980,33914500,33912399,33909211,33907453,33904021,33903639	Gene ID= ENSG00000241837.6 TPM= 947.45 Transcript Type= protein_coding
chr21	33903456	33915791	33903456	33915791	-	transcript711.chr21.nnic@ATP5O	transcript711.chr21.nnic	protein_coding	33915728,33914450,33912289,33903935,33903456	33915791,33914500,33912399,33904021,33903639	Gene ID= ENSG00000241837.6 TPM= 24.43 Transcript Type= NA
chr21	34073523	34143034	34073523	34143034	+	ENST00000399312.2@MRPS6	ENST00000399312.2	protein_coding	34073523,34125341,34142408	34073745,34125480,34143034	Gene ID= ENSG00000243927.5 TPM= 36.11 Transcript Type= protein_coding
chr21	34073570	34106262	34073570	34106262	+	ENST00000381151.4@SLC5A3	ENST00000381151.4	protein_coding	34073570,34094863	34073745,34106262	Gene ID= ENSG00000198743.6 TPM= 2.12 Transcript Type= protein_coding
chr21	34073578	34074275	34073578	34074275	+	transcript720.chr21.nnic@NA	transcript720.chr21.nnic	NA	34073578	34074275	Gene ID= novel_gene_chr21_721 TPM= 9.56 Transcript Type= NA
chr21	34082057	34086096	34082057	34086096	-	transcript722.chr21.nnic@NA	transcript722.chr21.nnic	NA	34082057	34086096	Gene ID= novel_gene_chr21_723 TPM= 8.5 Transcript Type= NA
chr21	34111847	34115480	34111847	34115480	-	transcript724.chr21.nnic@NA	transcript724.chr21.nnic	NA	34111847	34115480	Gene ID= novel_gene_chr21_725 TPM= 6.37 Transcript Type= NA
chr21	34375480	34402777	34375480	34402777	+	ENST00000481710.5@SMIM11A	ENST00000481710.5	protein_coding	34375480,34379428,34385478,34399711,34402091	34375567,34379516,34385644,34399899,34402777	Gene ID= ENSG00000205670.10 TPM= 2.66 Transcript Type= processed_transcript
chr21	34375500	34389154	34375500	34389154	+	ENST00000399292.7@SMIM11A	ENST00000399292.7	protein_coding	34375500,34379428,34385478,34388629	34375567,34379516,34385644,34389154	Gene ID= ENSG00000205670.10 TPM= 12.21 Transcript Type= protein_coding
chr21	34446688	34459604	34446688	34459604	-	ENST00000432085.5@KCNE1	ENST00000432085.5	protein_coding	34459529,34458654,34446688	34459604,34458764,34449684	Gene ID= ENSG00000180509.11 TPM= 4.78 Transcript Type= protein_coding
chr21	34446690	34459604	34446690	34459604	-	ENST00000399289.7@KCNE1	ENST00000399289.7	protein_coding	34459529,34458654,34446690	34459604,34458736,34449684	Gene ID= ENSG00000180509.11 TPM= 5.84 Transcript Type= protein_coding
chr21	34516484	34526963	34516484	34526963	-	ENST00000381132.6@RCAN1	ENST00000381132.6	protein_coding	34526663,34523537,34521499,34516484	34526963,34523710,34521658,34518256	Gene ID= ENSG00000159200.17 TPM= 104.62 Transcript Type= protein_coding
chr21	34516484	34615142	34516484	34615142	-	ENST00000313806.8@RCAN1	ENST00000313806.8	protein_coding	34614760,34523537,34521499,34516484	34615142,34523710,34521658,34518256	Gene ID= ENSG00000159200.17 TPM= 112.06 Transcript Type= protein_coding
chr21	34864097	34867284	34864097	34867284	+	transcript747.chr21.nnic@NA	transcript747.chr21.nnic	NA	34864097	34867284	Gene ID= novel_gene_chr21_748 TPM= 3.19 Transcript Type= NA
chr21	36034541	36060563	36034541	36060563	-	transcript754.chr21.nic@SETD4	transcript754.chr21.nic	protein_coding	36060347,36058816,36057109,36053583,36048308,36045582,36043782,36041807,36040575,36038150,36034541	36060563,36058924,36057204,36053620,36048396,36046011,36043956,36041888,36040655,36038273,36036251	Gene ID= ENSG00000185917.13 TPM= 7.25 Transcript Type= NA
chr21	36034541	36060582	36034541	36060582	-	transcript755.chr21.nic@SETD4	transcript755.chr21.nic	protein_coding	36060347,36058816,36057109,36053583,36048308,36045582,36043782,36041807,36040575,36038150,36034541	36060582,36058973,36057204,36053620,36048396,36046011,36043956,36041888,36040655,36038273,36036251	Gene ID= ENSG00000185917.13 TPM= 3.01 Transcript Type= NA
chr21	36043686	36060563	36043686	36060563	-	transcript760.chr21.nic@SETD4	transcript760.chr21.nic	protein_coding	36060347,36058816,36057109,36053583,36048308,36045582,36043686	36060563,36058924,36057204,36053620,36048396,36046011,36043956	Gene ID= ENSG00000185917.13 TPM= 8.5 Transcript Type= NA
chr21	36043686	36060582	36043686	36060582	-	transcript761.chr21.nic@SETD4	transcript761.chr21.nic	protein_coding	36060347,36058816,36057109,36053583,36048308,36045582,36043686	36060582,36058973,36057204,36053620,36048396,36046011,36043956	Gene ID= ENSG00000185917.13 TPM= 7.44 Transcript Type= NA
chr21	36034541	36060550	36034541	36060550	-	ENST00000332131.8@SETD4	ENST00000332131.8	protein_coding	36060347,36058816,36057109,36053583,36048308,36045582,36043782,36041807,36040575,36038150,36036085,36034541	36060550,36058924,36057204,36053620,36048396,36046011,36043956,36041888,36040655,36038273,36036251,36035960	Gene ID= ENSG00000185917.13 TPM= 1.41 Transcript Type= protein_coding
chr21	36069941	36073166	36069941	36073166	+	ENST00000290349.10@CBR1	ENST00000290349.10	protein_coding	36069941,36070950,36072446	36070404,36071057,36073166	Gene ID= ENSG00000159228.12 TPM= 79.66 Transcript Type= protein_coding
chr21	36069941	36073166	36069941	36073166	+	ENST00000530908.5@CBR1	ENST00000530908.5	protein_coding	36069941,36070950,36071815	36070404,36071057,36073166	Gene ID= ENSG00000159228.12 TPM= 5.31 Transcript Type= protein_coding
chr21	36134912	36146566	36134912	36146566	+	ENST00000290354.5@CBR3	ENST00000290354.5	protein_coding	36134912,36137825,36146076	36135481,36137932,36146566	Gene ID= ENSG00000159231.5 TPM= 3.19 Transcript Type= protein_coding
chr21	36320189	36376646	36320189	36376646	+	ENST00000400485.5@MORC3	ENST00000400485.5	protein_coding	36320189,36333646,36336874,36337732,36338774,36341399,36344579,36344912,36349311,36356620,36359955,36360184,36362183,36364093,36368988,36372374,36375143	36320303,36333718,36337006,36337946,36338921,36341546,36344707,36345031,36349408,36356724,36360077,36360258,36362228,36364259,36369876,36372531,36376646	Gene ID= ENSG00000159256.12 TPM= 15.93 Transcript Type= protein_coding
chr21	37063043	37073190	37063043	37073190	-	transcript815.chr21.nnic@PIGP	transcript815.chr21.nnic	protein_coding	37073000,37072434,37069552,37067262,37063538,37063043	37073190,37072537,37069624,37067380,37065712,37063501	Gene ID= ENSG00000185808.13 TPM= 2.12 Transcript Type= NA
chr21	37065374	37073170	37065374	37073170	-	ENST00000399098.5@PIGP	ENST00000399098.5	protein_coding	37073000,37072434,37072145,37069552,37067262,37065374	37073170,37072537,37072310,37069624,37067380,37065712	Gene ID= ENSG00000185808.13 TPM= 10.09 Transcript Type= protein_coding
chr21	37065374	37073011	37065374	37073011	-	ENST00000399103.5@PIGP	ENST00000399103.5	protein_coding	37072991,37072434,37069552,37067262,37065374	37073011,37072537,37069624,37067380,37065712	Gene ID= ENSG00000185808.13 TPM= 4.78 Transcript Type= protein_coding
chr21	37073268	37182830	37073268	37182830	+	transcript785.chr21.nic@TTC3	transcript785.chr21.nic	protein_coding	37073268,37087247,37087833,37088196,37088799,37090233,37091293,37094005,37095350,37096581,37108392,37121817,37122983,37124619,37126080,37129003,37132682,37135380,37138634,37140561,37144525,37147481,37148546,37150078,37150820,37151893,37152951,37156655,37159699,37160802,37161990,37164051,37165550,37167555,37172595,37182774	37073473,37087401,37087875,37088346,37088886,37090286,37091413,37094090,37095444,37096643,37108446,37121979,37123028,37124742,37126143,37129063,37132766,37135514,37138714,37140673,37144645,37147603,37148647,37150170,37150884,37152029,37153277,37156906,37159745,37160858,37162063,37164215,37166615,37167620,37172744,37182830	Gene ID= ENSG00000182670.13 TPM= 5.31 Transcript Type= NA
chr21	37073219	37165751	37073219	37165751	+	transcript788.chr21.nic@TTC3	transcript788.chr21.nic	protein_coding	37073219,37087247,37087833,37088196,37088799,37090233,37091293,37094005,37095350,37096581,37108392,37121817,37122983,37124619,37126080,37129003,37132682,37135380,37138634,37140561,37144525,37147481,37148546,37150078,37150820,37151893,37152951,37156655,37159699,37160802,37161990,37164051,37165550	37073364,37087401,37087875,37088346,37088886,37090286,37091413,37094090,37095444,37096643,37108446,37121979,37123028,37124742,37126143,37129063,37132766,37135514,37138714,37140673,37144645,37147603,37148647,37150170,37150884,37152029,37153277,37156906,37159745,37160858,37162063,37164215,37165751	Gene ID= ENSG00000182670.13 TPM= 3.19 Transcript Type= NA
chr21	37073251	37165751	37073251	37165751	+	ENST00000418766.5@TTC3	ENST00000418766.5	protein_coding	37073251,37087247,37087833,37088196,37088799,37090233,37091293,37094005,37095350,37096581,37108392,37121817,37122983,37124619,37126080,37129003,37132682,37135380,37138634,37140561,37144525,37147481,37148546,37150078,37150820,37151893,37152951,37156655,37159699,37160802,37161990,37164051,37165550	37073473,37087401,37087875,37088346,37088886,37090286,37091413,37094090,37095444,37096643,37108446,37121979,37123028,37124742,37126143,37129063,37132766,37135514,37138714,37140673,37144645,37147603,37148647,37150170,37150884,37152029,37153277,37156906,37159745,37160858,37162063,37164215,37165751	Gene ID= ENSG00000182670.13 TPM= 8.5 Transcript Type= protein_coding
chr21	37073275	37165751	37073275	37165751	+	transcript798.chr21.nic@TTC3	transcript798.chr21.nic	protein_coding	37073275,37108392,37121817,37122983,37124619,37126080,37129003,37132682,37135380,37138634,37140561,37144525,37147481,37148546,37150078,37150820,37151893,37152951,37156655,37159699,37160802,37161990,37164051,37165550	37073473,37108446,37121979,37123028,37124742,37126143,37129063,37132766,37135514,37138714,37140673,37144645,37147603,37148647,37150170,37150884,37152029,37153277,37156906,37159745,37160858,37162063,37164215,37165751	Gene ID= ENSG00000182670.13 TPM= 4.25 Transcript Type= NA
chr21	37073235	37165751	37073235	37165751	+	transcript799.chr21.nic@TTC3	transcript799.chr21.nic	protein_coding	37073235,37108392,37121817,37122983,37124619,37126080,37129003,37132682,37135380,37138634,37140561,37144525,37147481,37148546,37150078,37150820,37151893,37152951,37156655,37159699,37160802,37161990,37164051,37165550	37073364,37108446,37121979,37123028,37124742,37126143,37129063,37132766,37135514,37138714,37140673,37144645,37147603,37148647,37150170,37150884,37152029,37153277,37156906,37159745,37160858,37162063,37164215,37165751	Gene ID= ENSG00000182670.13 TPM= 4.25 Transcript Type= NA
chr21	37073267	37151958	37073267	37151958	+	ENST00000450533.5@TTC3	ENST00000450533.5	protein_coding	37073267,37087247,37087833,37088196,37088799,37090233,37091293,37094005,37095350,37096581,37108392,37121817,37122983,37124619,37126080,37129003,37132682,37135380,37138634,37140561,37144525,37147481,37148546,37150078,37150820,37151893	37073364,37087401,37087875,37088346,37088886,37090286,37091413,37094090,37095444,37096643,37108446,37121979,37123028,37124742,37126143,37129063,37132766,37135514,37138714,37140673,37144645,37147603,37148647,37150170,37150884,37151958	Gene ID= ENSG00000182670.13 TPM= 4.25 Transcript Type= protein_coding
chr21	37073274	37077376	37073274	37077376	+	transcript821.chr21.nnic@NA	transcript821.chr21.nnic	NA	37073274	37077376	Gene ID= novel_gene_chr21_822 TPM= 8.5 Transcript Type= NA
chr21	37076696	37078203	37076696	37078203	-	transcript823.chr21.nnic@NA	transcript823.chr21.nnic	NA	37076696	37078203	Gene ID= novel_gene_chr21_824 TPM= 25.49 Transcript Type= NA
chr21	37079519	37080382	37079519	37080382	-	transcript827.chr21.nnic@NA	transcript827.chr21.nnic	NA	37079519	37080382	Gene ID= novel_gene_chr21_828 TPM= 9.56 Transcript Type= NA
chr21	37223420	37267536	37223420	37267536	-	transcript834.chr21.nnic@DSCR3	transcript834.chr21.nnic	protein_coding	37267238,37240496,37238460,37233362,37232377,37228242,37227654,37223420	37267536,37240639,37238609,37233442,37232451,37228373,37227806,37225626	Gene ID= ENSG00000157538.13 TPM= 8.5 Transcript Type= NA
chr21	37223420	37267532	37223420	37267532	-	ENST00000309117.10@DSCR3	ENST00000309117.10	protein_coding	37267238,37240496,37238460,37233362,37232377,37228223,37227654,37223420	37267532,37240639,37238609,37233442,37232451,37228373,37227806,37225626	Gene ID= ENSG00000157538.13 TPM= 42.49 Transcript Type= protein_coding
chr21	37261082	37267340	37261082	37267340	-	ENST00000498789.1@DSCR3	ENST00000498789.1	protein_coding	37267238,37261082	37267340,37261937	Gene ID= ENSG00000157538.13 TPM= 3.19 Transcript Type= processed_transcript
chr21	37512998	37515173	37512998	37515173	+	transcript843.chr21.nnic@NA	transcript843.chr21.nnic	NA	37512998	37515173	Gene ID= novel_gene_chr21_844 TPM= 7.44 Transcript Type= NA
chr21	37559980	37563841	37559980	37563841	-	transcript845.chr21.nnic@NA	transcript845.chr21.nnic	NA	37559980	37563841	Gene ID= novel_gene_chr21_846 TPM= 2.12 Transcript Type= NA
chr21	38380027	38498483	38380027	38498483	-	ENST00000288319.11@ERG	ENST00000288319.11	protein_coding	38498363,38445404,38423410,38403506,38402557,38400574,38392376,38391659,38390995,38380027	38498483,38445621,38423561,38403709,38402637,38400645,38392444,38391715,38391042,38383923	Gene ID= ENSG00000157554.18 TPM= 3.19 Transcript Type= protein_coding
chr21	39236636	39313637	39236636	39313637	-	transcript858.chr21.nic@BRWD1	transcript858.chr21.nic	protein_coding	39313443,39313241,39313072,39312841,39298432,39296265,39295743,39293811,39280148,39278743,39277251,39276173,39274374,39270283,39269899,39264891,39264460,39258487,39255645,39250796,39247701,39238479,39236636	39313637,39313299,39313101,39312900,39298582,39296363,39295903,39294032,39280248,39278813,39277351,39276213,39274472,39270433,39270033,39265019,39264685,39258672,39255828,39250889,39247832,39238573,39236784	Gene ID= ENSG00000185658.13 TPM= 13.28 Transcript Type= NA
chr21	39184176	39313819	39184176	39313819	-	ENST00000333229.6@BRWD1	ENST00000333229.6	protein_coding	39313443,39313241,39313072,39312841,39298432,39296265,39295743,39293811,39280148,39278743,39277251,39276173,39274374,39270283,39269899,39264891,39264460,39258487,39255645,39250796,39247701,39238479,39236595,39232373,39232177,39229312,39228500,39225086,39224408,39218505,39218152,39215237,39213481,39212666,39210786,39209995,39206108,39202325,39200219,39198763,39196498,39184176	39313819,39313299,39313101,39312900,39298582,39296363,39295903,39294032,39280248,39278813,39277351,39276213,39274472,39270433,39270033,39265019,39264685,39258672,39255828,39250889,39247832,39238573,39236784,39232498,39232284,39229436,39228582,39225197,39224469,39218660,39218272,39215362,39213553,39212707,39210929,39210147,39206274,39202545,39200386,39199662,39197415,39187417	Gene ID= ENSG00000185658.13 TPM= 1.06 Transcript Type= protein_coding
chr21	39296437	39313642	39296437	39313642	-	ENST00000341322.4@BRWD1	ENST00000341322.4	protein_coding	39313443,39313241,39313072,39312841,39296437	39313642,39313299,39313101,39312900,39298582	Gene ID= ENSG00000185658.13 TPM= 33.99 Transcript Type= protein_coding
chr21	39313935	39314962	39313935	39314962	+	ENST00000603064.2@BRWD1-AS2	ENST00000603064.2	antisense_RNA	39313935	39314962	Gene ID= ENSG00000255568.3 TPM= 3.19 Transcript Type= antisense_RNA
chr21	39342315	39349130	39342315	39349130	-	transcript875.chr21.nnic@HMGN1	transcript875.chr21.nnic	protein_coding	39348903,39348545,39348422,39348292,39347916,39347379,39345830,39345146,39342315	39349130,39348577,39348451,39348339,39347952,39347483,39347292,39345274,39343159	Gene ID= ENSG00000205581.10 TPM= 7.42 Transcript Type= NA
chr21	39342315	39349130	39342315	39349130	-	transcript878.chr21.nic@HMGN1	transcript878.chr21.nic	protein_coding	39348903,39348545,39348422,39348292,39345830,39345146,39342315	39349130,39348577,39348451,39348339,39347952,39345274,39343159	Gene ID= ENSG00000205581.10 TPM= 7.79 Transcript Type= NA
chr21	39342315	39349130	39342315	39349130	-	transcript879.chr21.nic@HMGN1	transcript879.chr21.nic	protein_coding	39348903,39348545,39348422,39345830,39345146,39342315	39349130,39348577,39348451,39348339,39345274,39343159	Gene ID= ENSG00000205581.10 TPM= 18.4 Transcript Type= NA
chr21	39342315	39349200	39342315	39349200	-	ENST00000380749.9@HMGN1	ENST00000380749.9	protein_coding	39348903,39348545,39348422,39348292,39345146,39342315	39349200,39348577,39348451,39348339,39345274,39343159	Gene ID= ENSG00000205581.10 TPM= 69.88 Transcript Type= protein_coding
chr21	39347367	39349130	39347367	39349130	-	transcript881.chr21.nnic@HMGN1	transcript881.chr21.nnic	protein_coding	39348903,39348545,39348422,39348292,39347916,39347367	39349130,39348577,39348451,39348339,39347952,39347483	Gene ID= ENSG00000205581.10 TPM= 5.49 Transcript Type= NA
chr21	39342315	39349099	39342315	39349099	-	ENST00000486741.5@HMGN1	ENST00000486741.5	protein_coding	39348903,39348545,39348422,39345146,39342315	39349099,39348577,39348451,39348339,39343159	Gene ID= ENSG00000205581.10 TPM= 4.03 Transcript Type= retained_intron
chr21	39342315	39348991	39342315	39348991	-	ENST00000288344.14@HMGN1	ENST00000288344.14	protein_coding	39348903,39348545,39348422,39348292,39345830,39345146,39342315	39348991,39348577,39348451,39348339,39345958,39345274,39343159	Gene ID= ENSG00000205581.10 TPM= 3.01 Transcript Type= nonsense_mediated_decay
chr21	39380244	39397889	39380244	39397889	+	ENST00000333781.9@WRB	ENST00000333781.9	protein_coding	39380244,39390698,39391769,39393166,39396866	39380486,39390863,39391836,39393280,39397889	Gene ID= ENSG00000182093.14 TPM= 15.93 Transcript Type= protein_coding
chr21	39387765	39397889	39387765	39397889	+	ENST00000380708.5@WRB	ENST00000380708.5	protein_coding	39387765,39390698,39391769,39393166,39396866	39387855,39390863,39391836,39393280,39397889	Gene ID= ENSG00000182093.14 TPM= 2.12 Transcript Type= protein_coding
chr21	39452669	39515506	39452669	39515506	+	transcript906.chr21.nnic@SH3BGR	transcript906.chr21.nnic	protein_coding	39452669,39462375,39475135,39499823,39508998,39511680,39515088	39452829,39462560,39475215,39499915,39509027,39511809,39515506	Gene ID= ENSG00000185437.13 TPM= 10.97 Transcript Type= NA
chr21	39445855	39515506	39445855	39515506	+	ENST00000380637.7@SH3BGR	ENST00000380637.7	protein_coding	39445855,39462375,39475135,39499823,39508998,39511680,39515088	39445929,39462560,39475215,39499915,39509027,39511809,39515506	Gene ID= ENSG00000185437.13 TPM= 7.79 Transcript Type= protein_coding
chr21	39451830	39515506	39451830	39515506	+	ENST00000333634.8@SH3BGR	ENST00000333634.8	protein_coding	39451830,39462375,39475135,39499823,39508998,39511680,39515088	39452141,39462560,39475215,39499915,39509027,39511809,39515506	Gene ID= ENSG00000185437.13 TPM= 149.05 Transcript Type= protein_coding
chr21	41167801	41276597	41167801	41276597	+	ENST00000330333.10@BACE2	ENST00000330333.10	protein_coding	41167801,41226266,41237513,41241819,41243376,41245962,41250752,41257158,41275371	41168575,41226354,41237729,41241947,41243510,41246063,41250901,41257326,41276597	Gene ID= ENSG00000182240.15 TPM= 4.25 Transcript Type= protein_coding
chr21	41361943	41408943	41361943	41408943	+	ENST00000330714.7@MX2	ENST00000330714.7	protein_coding	41361943,41376836,41377789,41380017,41382410,41390565,41395587,41397613,41398897,41399196,41401970,41403267,41406744,41407991	41362055,41377155,41377981,41380151,41382564,41390703,41395785,41397691,41399019,41399337,41402128,41403343,41406998,41408943	Gene ID= ENSG00000183486.12 TPM= 3.19 Transcript Type= protein_coding
chr21	41426167	41459214	41426167	41459214	+	ENST00000398598.7@MX1	ENST00000398598.7	protein_coding	41426167,41427206,41427755,41430533,41432050,41435837,41437015,41439694,41440887,41441716,41443788,41445448,41446000,41449137,41451167,41452621,41458528	41426263,41427304,41427866,41430608,41432175,41436029,41437152,41439848,41441025,41441914,41443866,41445570,41446141,41449295,41451243,41452869,41459214	Gene ID= ENSG00000157601.13 TPM= 9.56 Transcript Type= protein_coding
chr21	42219118	42297244	42219118	42297244	+	ENST00000398449.7@ABCG1	ENST00000398449.7	protein_coding	42219118,42225671,42271070,42273303,42276895,42282274,42284560,42285880,42287889,42288211,42290050,42291092,42291498,42294542,42296164	42219304,42225914,42271187,42273435,42276945,42282419,42284683,42285994,42288037,42288312,42290218,42291192,42291656,42294660,42297244	Gene ID= ENSG00000160179.18 TPM= 7.44 Transcript Type= protein_coding
chr21	42219118	42297244	42219118	42297244	+	ENST00000361802.6@ABCG1	ENST00000361802.6	protein_coding	42219118,42225671,42271070,42273303,42276895,42282274,42284560,42285880,42287889,42288211,42290050,42291092,42291498,42294542,42296164	42219304,42225914,42271187,42273435,42276945,42282419,42284683,42285994,42288073,42288312,42290218,42291192,42291656,42294660,42297244	Gene ID= ENSG00000160179.18 TPM= 5.31 Transcript Type= protein_coding
chr21	42312053	42315524	42312053	42315524	-	transcript940.chr21.nic@TFF3	transcript940.chr21.nic	protein_coding	42315293,42313495,42313485,42312053	42315524,42313631,42313493,42312269	Gene ID= ENSG00000160180.15 TPM= 2.12 Transcript Type= NA
chr21	42311667	42315651	42311667	42315651	-	ENST00000518498.1@TFF3	ENST00000518498.1	protein_coding	42315293,42313485,42311667	42315651,42313631,42312269	Gene ID= ENSG00000160180.15 TPM= 1.06 Transcript Type= protein_coding
chr21	42513698	42581440	42513698	42581440	+	transcript944.chr21.nic@SLC37A1	transcript944.chr21.nic	protein_coding	42513698,42514631,42518277,42525776,42534698,42535472,42539512,42542404,42543436,42547103,42554062,42558958,42562078,42563815,42564708,42565827,42566985,42568360,42574818,42579736,42580345	42513924,42514717,42518510,42525857,42534830,42535550,42539647,42542480,42543602,42547140,42554142,42559089,42562168,42563877,42564793,42565875,42567058,42568438,42574915,42579800,42581440	Gene ID= ENSG00000160190.13 TPM= 4.96 Transcript Type= NA
chr21	42513698	42581440	42513698	42581440	+	transcript945.chr21.nnic@SLC37A1	transcript945.chr21.nnic	protein_coding	42513698,42518277,42525776,42534698,42535472,42539512,42542404,42543436,42547103,42554062,42558958,42562078,42563815,42564708,42565827,42566985,42568360,42574818,42579736,42580345	42513924,42518510,42525857,42534830,42535550,42539647,42542480,42543602,42547140,42554142,42559089,42562168,42563877,42564793,42565875,42567058,42568438,42574915,42579800,42581440	Gene ID= ENSG00000160190.13 TPM= 6.02 Transcript Type= NA
chr21	42513914	42581440	42513914	42581440	+	ENST00000352133.2@SLC37A1	ENST00000352133.2	protein_coding	42513914,42518277,42525776,42534698,42535472,42539512,42542404,42543436,42547103,42554062,42558958,42562078,42563815,42564708,42565827,42566985,42568360,42574818,42579736,42580345	42514717,42518510,42525857,42534830,42535550,42539647,42542480,42543602,42547140,42554142,42559089,42562168,42563877,42564793,42565875,42567058,42568438,42574915,42579800,42581440	Gene ID= ENSG00000160190.13 TPM= 1.77 Transcript Type= protein_coding
chr21	42843094	42843564	42843094	42843564	-	transcript960.chr21.nnic@NA	transcript960.chr21.nnic	NA	42843094	42843564	Gene ID= novel_gene_chr21_961 TPM= 3.19 Transcript Type= NA
chr21	42847666	42879579	42847666	42879579	-	transcript953.chr21.nnic@WDR4	transcript953.chr21.nnic	protein_coding	42879407,42876702,42873551,42863440,42862282,42859662,42855682,42854562,42853569,42852255,42850041,42847666	42879579,42876767,42873691,42863596,42862394,42859722,42855780,42854626,42853752,42852324,42850242,42849697	Gene ID= ENSG00000160193.11 TPM= 3.19 Transcript Type= NA
chr21	42843094	42879531	42843094	42879531	-	ENST00000330317.6@WDR4	ENST00000330317.6	protein_coding	42879407,42876702,42873551,42863440,42862282,42859662,42855682,42854562,42853569,42852255,42850041,42843094	42879531,42876767,42873691,42863596,42862394,42859722,42855780,42854626,42853752,42852324,42850242,42843281	Gene ID= ENSG00000160193.11 TPM= 2.12 Transcript Type= protein_coding
chr21	42849226	42879555	42849226	42879555	-	ENST00000398208.2@WDR4	ENST00000398208.2	protein_coding	42879407,42876702,42873551,42863440,42862282,42859662,42855682,42854562,42853569,42852255,42849226	42879555,42876767,42873691,42863596,42862394,42859722,42855780,42854626,42853752,42852324,42850242	Gene ID= ENSG00000160193.11 TPM= 4.25 Transcript Type= protein_coding
chr21	42893265	42909105	42893265	42909105	+	ENST00000354250.6@NDUFV3	ENST00000354250.6	protein_coding	42893265,42896927,42903182,42908864	42893381,42897047,42904276,42909105	Gene ID= ENSG00000160194.17 TPM= 11.68 Transcript Type= protein_coding
chr21	42893268	42913304	42893268	42913304	+	ENST00000340344.4@NDUFV3	ENST00000340344.4	protein_coding	42893268,42896927,42908864	42893381,42897047,42913304	Gene ID= ENSG00000160194.17 TPM= 165.7 Transcript Type= protein_coding
chr21	42893290	42909100	42893290	42909100	+	transcript973.chr21.nnic@NDUFV3	transcript973.chr21.nnic	protein_coding	42893290,42908864	42893381,42909100	Gene ID= ENSG00000160194.17 TPM= 5.31 Transcript Type= NA
chr21	42974510	43033582	42974510	43033582	+	ENST00000291547.9@PKNOX1	ENST00000291547.9	protein_coding	42974510,43004326,43007491,43010053,43013068,43016908,43018133,43021303,43024871,43028702,43029890	42974664,43004432,43007618,43010224,43013238,43017007,43018230,43021431,43024947,43028874,43033582	Gene ID= ENSG00000160199.14 TPM= 1.06 Transcript Type= protein_coding
chr21	42974510	43033931	42974510	43033931	+	ENST00000432907.6@PKNOX1	ENST00000432907.6	protein_coding	42974510,43004326,43007491,43013068,43016908,43018133,43021303,43024871,43028702,43029890	42974664,43004432,43007618,43013238,43017007,43018230,43021431,43024947,43028874,43033931	Gene ID= ENSG00000160199.14 TPM= 1.06 Transcript Type= protein_coding
chr21	43053191	43075878	43053191	43075878	-	transcript982.chr21.nic@CBS	transcript982.chr21.nic	protein_coding	43075770,43073266,43071985,43068509,43066243,43065616,43065387,43065203,43063900,43062953,43062311,43060441,43059226,43058834,43058145,43056803,43053862,43053191	43075878,43073341,43072201,43068615,43066377,43065695,43065521,43065272,43063991,43063078,43062395,43060546,43059303,43058968,43058253,43056887,43053983,43053647	Gene ID= ENSG00000160200.17 TPM= 14.16 Transcript Type= NA
chr21	43053191	43075945	43053191	43075945	-	ENST00000398165.7@CBS	ENST00000398165.7	protein_coding	43075770,43073266,43071985,43068509,43066243,43065616,43065387,43065203,43063900,43062953,43062311,43060441,43059226,43058834,43058145,43056803,43053191	43075945,43073341,43072201,43068615,43066377,43065695,43065521,43065272,43063991,43063078,43062395,43060546,43059303,43058968,43058253,43056887,43053983	Gene ID= ENSG00000160200.17 TPM= 29.03 Transcript Type= protein_coding
chr21	43053191	43076378	43053191	43076378	-	ENST00000352178.9@CBS	ENST00000352178.9	protein_coding	43076225,43073266,43071985,43068509,43066243,43065616,43065387,43065203,43063900,43062953,43062311,43060441,43059226,43058834,43058145,43056803,43053191	43076378,43073341,43072201,43068615,43066377,43065695,43065521,43065272,43063991,43063078,43062395,43060546,43059303,43058968,43058253,43056887,43053983	Gene ID= ENSG00000160200.17 TPM= 3.54 Transcript Type= protein_coding
chr21	43092956	43107587	43092956	43107587	-	ENST00000291552.8@U2AF1	ENST00000291552.8	protein_coding	43107451,43104315,43100453,43095694,43095438,43094655,43094471,43092956	43107587,43104402,43100519,43095743,43095536,43094788,43094563,43093249	Gene ID= ENSG00000160201.11 TPM= 68.69 Transcript Type= protein_coding
chr21	43092956	43107565	43092956	43107565	-	ENST00000380276.6@U2AF1	ENST00000380276.6	protein_coding	43107451,43104315,43101366,43095694,43095438,43094655,43094471,43092956	43107565,43104402,43101432,43095743,43095536,43094788,43094563,43093249	Gene ID= ENSG00000160201.11 TPM= 29.39 Transcript Type= protein_coding
chr21	43092957	43107578	43092957	43107578	-	ENST00000398137.5@U2AF1	ENST00000398137.5	protein_coding	43107451,43104315,43101366,43100453,43095694,43095438,43094655,43094471,43092957	43107578,43104402,43101432,43100519,43095743,43095536,43094788,43094563,43093249	Gene ID= ENSG00000160201.11 TPM= 3.9 Transcript Type= protein_coding
chr21	43097622	43107524	43097622	43107524	-	ENST00000496462.1@U2AF1	ENST00000496462.1	protein_coding	43107451,43104315,43097622	43107524,43104402,43101432	Gene ID= ENSG00000160201.11 TPM= 1.06 Transcript Type= retained_intron
chr21	43355584	43359041	43355584	43359041	-	transcript994.chr21.nnic@NA	transcript994.chr21.nnic	NA	43355584	43359041	Gene ID= novel_gene_chr21_995 TPM= 2.12 Transcript Type= NA
chr21	43659538	43687567	43659538	43687567	+	transcript998.chr21.nic@RRP1B	transcript998.chr21.nic	protein_coding	43659538,43669884,43672308,43673870,43674636,43675034,43676272,43676733,43683279,43684553,43685770,43686804,43687516	43659794,43669966,43672365,43673955,43674697,43675163,43676336,43676914,43683373,43684650,43685789,43686935,43687567	Gene ID= ENSG00000160208.12 TPM= 4.25 Transcript Type= NA
chr21	43659548	43696079	43659548	43696079	+	ENST00000340648.5@RRP1B	ENST00000340648.5	protein_coding	43659548,43669884,43672308,43673870,43674636,43675034,43676272,43676733,43683279,43684553,43685770,43686804,43687516,43690288,43691439,43693190	43659794,43669966,43672365,43673955,43674697,43675163,43676336,43676914,43683373,43684650,43685789,43686935,43688240,43690440,43691502,43696079	Gene ID= ENSG00000160208.12 TPM= 13.81 Transcript Type= protein_coding
chr21	43758362	43761116	43758362	43761116	+	transcript1004.chr21.nnic@NA	transcript1004.chr21.nnic	NA	43758362	43761116	Gene ID= novel_gene_chr21_1005 TPM= 7.44 Transcript Type= NA
chr21	43772511	43776445	43772511	43776445	-	ENST00000291568.6@CSTB	ENST00000291568.6	protein_coding	43776204,43774658,43772511	43776445,43774759,43774330	Gene ID= ENSG00000160213.6 TPM= 2.12 Transcript Type= protein_coding
chr21	43789535	43804099	43789535	43804099	+	transcript1011.chr21.nic@RRP1	transcript1011.chr21.nic	protein_coding	43789535,43791350,43792672,43793319,43795189,43797422,43797631,43797907,43799570,43800517,43800862,43802274,43803512	43789695,43791432,43792729,43793404,43795250,43797551,43797695,43798100,43799649,43800614,43800881,43802387,43804099	Gene ID= ENSG00000160214.12 TPM= 2.12 Transcript Type= NA
chr21	43789513	43805293	43789513	43805293	+	ENST00000497547.1@RRP1	ENST00000497547.1	protein_coding	43789513,43791350,43792672,43793319,43795189,43797422,43797631,43797907,43799570,43800517,43800862,43802274,43803512	43789762,43791432,43792729,43793404,43795250,43797551,43797695,43798100,43799649,43800614,43800881,43802387,43805293	Gene ID= ENSG00000160214.12 TPM= 14.87 Transcript Type= protein_coding
chr21	43982639	43985410	43982639	43985410	+	transcript1022.chr21.nnic@NA	transcript1022.chr21.nnic	NA	43982639	43985410	Gene ID= novel_gene_chr21_1023 TPM= 10.09 Transcript Type= NA
chr21	43984424	43987131	43984424	43987131	+	transcript1020.chr21.nnic@NA	transcript1020.chr21.nnic	NA	43984424	43987131	Gene ID= novel_gene_chr21_1021 TPM= 33.46 Transcript Type= NA
chr21	44012319	44060262	44012319	44060262	+	ENST00000380221.7@TRAPPC10	ENST00000380221.7	protein_coding	44012319,44032091,44037792,44052280,44055698,44059103,44059465	44012560,44032172,44037927,44052476,44055893,44059214,44060262	Gene ID= ENSG00000160218.12 TPM= 2.12 Transcript Type= protein_coding
chr21	44107290	44131181	44107290	44131181	+	ENST00000291576.11@PWP2	ENST00000291576.11	protein_coding	44107290,44108984,44113753,44114179,44114625,44115264,44115691,44117820,44118763,44119387,44120348,44120631,44120952,44122177,44124580,44126011,44126900,44127932,44128247,44128552,44130597	44107434,44109096,44113847,44114278,44114768,44115399,44115920,44117963,44118833,44119523,44120496,44120778,44121102,44122357,44124727,44126119,44126965,44128150,44128397,44128626,44131181	Gene ID= ENSG00000241945.7 TPM= 9.56 Transcript Type= protein_coding
chr21	44300025	44327376	44300025	44327376	+	transcript1037.chr21.nnic@PFKL	transcript1037.chr21.nnic	protein_coding	44300025,44306681,44307260,44311006,44312105,44312978,44313638,44313913,44316244,44316432,44318470,44319351,44320084,44321729,44322133,44322962,44323766,44324491,44324856,44325153,44325961,44326159,44326715	44300190,44306754,44307328,44311083,44312294,44313143,44313682,44314021,44316339,44316524,44318595,44319415,44320147,44321875,44322203,44323049,44323918,44324655,44324917,44325264,44326060,44326264,44327376	Gene ID= ENSG00000141959.16 TPM= 75.6 Transcript Type= NA
chr21	44300051	44327376	44300051	44327376	+	ENST00000349048.8@PFKL	ENST00000349048.8	protein_coding	44300051,44306681,44311006,44312105,44312978,44313638,44313913,44316244,44316432,44318470,44319351,44320084,44321729,44322133,44322962,44323766,44324491,44324856,44325153,44325961,44326159,44326715	44300190,44306754,44311083,44312294,44313143,44313682,44314021,44316339,44316524,44318595,44319415,44320147,44321875,44322203,44323049,44323918,44324655,44324917,44325264,44326060,44326264,44327376	Gene ID= ENSG00000141959.16 TPM= 171.2 Transcript Type= protein_coding
chr21	44327537	44332400	44327537	44332400	+	transcript1062.chr21.nnic@NA	transcript1062.chr21.nnic	NA	44327537	44332400	Gene ID= novel_gene_chr21_1063 TPM= 11.68 Transcript Type= NA
chr21	44328944	44339402	44328944	44339402	-	ENST00000339818.8@C21orf2	ENST00000339818.8	protein_coding	44339118,44337649,44335758,44333033,44331843,44330823,44328944	44339402,44337667,44335804,44333262,44332014,44330919,44330326	Gene ID= ENSG00000160226.15 TPM= 6.37 Transcript Type= protein_coding
chr21	44329891	44339402	44329891	44339402	-	ENST00000325223.7@C21orf2	ENST00000325223.7	protein_coding	44339118,44337649,44335758,44333033,44331843,44330823,44329891	44339402,44337667,44335804,44333262,44332014,44330916,44330326	Gene ID= ENSG00000160226.15 TPM= 6.72 Transcript Type= protein_coding
chr21	44329891	44339245	44329891	44339245	-	transcript1057.chr21.nnic@C21orf2	transcript1057.chr21.nnic	protein_coding	44339118,44337649,44333033,44331843,44330823,44329891	44339245,44337667,44333262,44332014,44330919,44330326	Gene ID= ENSG00000160226.15 TPM= 2.47 Transcript Type= NA
chr21	44329891	44335200	44329891	44335200	-	transcript1058.chr21.nic@C21orf2	transcript1058.chr21.nic	protein_coding	44334061,44333033,44331843,44330823,44329891	44335200,44333262,44332014,44330919,44330326	Gene ID= ENSG00000160226.15 TPM= 4.25 Transcript Type= NA
chr21	44329891	44339393	44329891	44339393	-	ENST00000397956.7@C21orf2	ENST00000397956.7	protein_coding	44339118,44337649,44335758,44333033,44331843,44330463,44329891	44339393,44337667,44335804,44333262,44332014,44330916,44330326	Gene ID= ENSG00000160226.15 TPM= 1.41 Transcript Type= protein_coding
chr21	44335298	44337097	44335298	44337097	+	transcript1064.chr21.nnic@NA	transcript1064.chr21.nnic	NA	44335298	44337097	Gene ID= novel_gene_chr21_1065 TPM= 3.19 Transcript Type= NA
chr21	44455487	44479972	44455487	44479972	+	transcript1066.chr21.nnic@LRRC3	transcript1066.chr21.nnic	protein_coding	44455487,44475728,44477229	44455655,44475849,44479972	Gene ID= ENSG00000160233.7 TPM= 2.12 Transcript Type= NA
chr21	44455486	44462196	44455486	44462196	+	ENST00000291592.5@LRRC3	ENST00000291592.5	protein_coding	44455486,44456498	44455655,44462196	Gene ID= ENSG00000160233.7 TPM= 3.19 Transcript Type= protein_coding
chr21	44473133	44475169	44473133	44475169	+	transcript1069.chr21.nnic@NA	transcript1069.chr21.nnic	NA	44473133	44475169	Gene ID= novel_gene_chr21_1070 TPM= 2.12 Transcript Type= NA
chr21	44768580	44802019	44768580	44802019	-	ENST00000345496.6@UBE2G2	ENST00000345496.6	protein_coding	44801706,44788060,44787920,44777299,44773547,44768580	44802019,44788095,44787965,44777417,44773687,44771489	Gene ID= ENSG00000184787.18 TPM= 31.86 Transcript Type= protein_coding
chr21	44805617	44818129	44805617	44818129	-	ENST00000332859.10@SUMO3	ENST00000332859.10	protein_coding	44817948,44813976,44809047,44805617	44818129,44814104,44809118,44807040	Gene ID= ENSG00000184900.15 TPM= 101.97 Transcript Type= protein_coding
chr21	44806719	44810602	44806719	44810602	-	transcript1087.chr21.nnic@NA	transcript1087.chr21.nnic	NA	44806719	44810602	Gene ID= novel_gene_chr21_1088 TPM= 2.12 Transcript Type= NA
chr21	44849585	44873837	44849585	44873837	-	ENST00000330938.7@PTTG1IP	ENST00000330938.7	protein_coding	44873502,44865395,44861163,44856193,44855210,44849585	44873837,44865447,44861271,44856364,44855256,44851627	Gene ID= ENSG00000183255.11 TPM= 557.28 Transcript Type= protein_coding
chr21	44849585	44873709	44849585	44873709	-	ENST00000397887.7@PTTG1IP	ENST00000397887.7	protein_coding	44873502,44865395,44861163,44849585	44873709,44865447,44861271,44851627	Gene ID= ENSG00000183255.11 TPM= 64.44 Transcript Type= protein_coding
chr21	44869210	44870546	44869210	44870546	+	transcript1100.chr21.nnic@NA	transcript1100.chr21.nnic	NA	44869210	44870546	Gene ID= novel_gene_chr21_1101 TPM= 27.62 Transcript Type= NA
chr21	44873388	44875805	44873388	44875805	+	transcript1102.chr21.nnic@NA	transcript1102.chr21.nnic	NA	44873388	44875805	Gene ID= novel_gene_chr21_1103 TPM= 3.19 Transcript Type= NA
chr21	44934725	44939917	44934725	44939917	-	transcript1111.chr21.nnic@LINC01547	transcript1111.chr21.nnic	lincRNA	44938444,44935627,44934725	44939917,44935890,44935096	Gene ID= ENSG00000183250.11 TPM= 2.12 Transcript Type= NA
chr21	44939991	44976976	44939991	44976976	+	transcript1117.chr21.nnic@FAM207A	transcript1117.chr21.nnic	protein_coding	44939991,44943684,44960100,44967034,44976680	44940186,44943792,44960168,44967181,44976976	Gene ID= ENSG00000160256.12 TPM= 4.25 Transcript Type= NA
chr21	44940010	44976989	44940010	44976989	+	ENST00000291634.10@FAM207A	ENST00000291634.10	protein_coding	44940010,44943684,44960100,44967034,44973197,44976680	44940186,44943837,44960168,44967181,44973265,44976989	Gene ID= ENSG00000160256.12 TPM= 14.34 Transcript Type= protein_coding
chr21	44940012	44976989	44940012	44976989	+	ENST00000397826.7@FAM207A	ENST00000397826.7	protein_coding	44940012,44943684,44960100,44967034,44973197,44976680	44940186,44943792,44960168,44967181,44973265,44976989	Gene ID= ENSG00000160256.12 TPM= 16.46 Transcript Type= protein_coding
chr21	45074600	45226560	45074600	45226560	+	ENST00000389861.7@ADARB1	ENST00000389861.7	protein_coding	45074600,45128402,45134715,45171610,45175730,45180330,45182585,45183362,45184923,45204555,45220836,45222018,45225547	45074793,45128573,45134832,45171684,45176664,45180444,45182753,45183510,45185091,45204736,45221014,45223577,45226560	Gene ID= ENSG00000197381.15 TPM= 3.19 Transcript Type= processed_transcript
chr21	45263928	45287898	45263928	45287898	-	ENST00000349485.9@POFUT2	ENST00000349485.9	protein_coding	45287741,45285678,45283383,45282349,45278103,45277017,45269839,45267590,45263928	45287898,45285928,45283527,45282459,45278169,45277142,45270019,45267713,45265635	Gene ID= ENSG00000186866.16 TPM= 22.31 Transcript Type= protein_coding
chr21	45291962	45311477	45291962	45311477	+	transcript1142.chr21.nnic@LINC00205	transcript1142.chr21.nnic	lincRNA	45291962,45310456	45293522,45311477	Gene ID= ENSG00000223768.1 TPM= 2.12 Transcript Type= NA
chr21	45293855	45296876	45293855	45296876	+	transcript1143.chr21.nnic@NA	transcript1143.chr21.nnic	NA	45293855	45296876	Gene ID= novel_gene_chr21_1144 TPM= 2.12 Transcript Type= NA
chr21	45403806	45404998	45403806	45404998	-	transcript1166.chr21.nnic@BX322562.1	transcript1166.chr21.nnic	lincRNA	45404813,45403806	45404998,45404496	Gene ID= ENSG00000273796.1 TPM= 2.12 Transcript Type= NA
chr21	45405123	45512567	45405123	45512567	+	transcript1149.chr21.nnic@COL18A1	transcript1149.chr21.nnic	protein_coding	45405123,45405379,45468242,45473895,45475476,45476351,45477411,45477750,45478327,45479902,45480070,45480467,45480700,45481963,45482795,45486861,45487447,45488418,45489486,45490275,45490836,45491225,45492535,45492687,45493163,45493501,45494545,45494862,45495358,45496500,45497050,45497599,45504011,45505257,45505358,45505838,45507561,45509356,45510064,45511111,45512188	45405241,45405473,45468786,45473981,45475535,45476480,45477487,45477965,45478353,45479964,45480156,45480520,45480858,45482025,45482821,45486992,45487509,45488444,45489521,45490346,45490871,45491314,45492564,45492713,45493225,45493575,45494571,45494915,45495432,45496568,45497092,45497661,45504035,45505278,45505431,45505966,45507593,45509601,45510261,45511226,45512567	Gene ID= ENSG00000182871.14 TPM= 12.21 Transcript Type= NA
chr21	45405137	45513720	45405137	45513720	+	ENST00000400337.6@COL18A1	ENST00000400337.6	protein_coding	45405137,45405379,45468242,45473895,45475476,45476351,45477411,45477750,45478327,45479902,45480070,45480467,45480700,45481963,45482795,45486861,45487447,45488418,45489486,45490275,45490836,45491225,45492535,45492687,45493163,45493501,45494545,45494862,45495358,45496500,45497050,45497599,45504011,45504416,45505134,45505358,45505838,45507561,45509356,45510064,45511111,45512188	45405241,45405473,45468786,45473981,45475535,45476480,45477487,45477965,45478353,45479964,45480156,45480520,45480858,45482025,45482821,45486992,45487509,45488444,45489521,45490346,45490871,45491314,45492564,45492713,45493225,45493575,45494571,45494915,45495432,45496568,45497092,45497661,45504054,45504556,45505278,45505431,45505966,45507593,45509601,45510261,45511226,45513720	Gene ID= ENSG00000182871.14 TPM= 119.49 Transcript Type= protein_coding
chr21	45422794	45425240	45422794	45425240	-	transcript1167.chr21.nnic@NA	transcript1167.chr21.nnic	NA	45422794	45425240	Gene ID= novel_gene_chr21_1168 TPM= 4.25 Transcript Type= NA
chr21	45470427	45473366	45470427	45473366	-	transcript1169.chr21.nnic@NA	transcript1169.chr21.nnic	NA	45470427	45473366	Gene ID= novel_gene_chr21_1170 TPM= 15.93 Transcript Type= NA
chr21	45513776	45542471	45513776	45542471	-	ENST00000311124.8@SLC19A1	ENST00000311124.8	protein_coding	45542368,45537771,45531389,45530770,45525817,45513776	45542471,45538008,45532148,45530971,45525958,45516140	Gene ID= ENSG00000173638.18 TPM= 2.12 Transcript Type= protein_coding
chr21	45522985	45527958	45522985	45527958	+	transcript1172.chr21.nnic@NA	transcript1172.chr21.nnic	NA	45522985,45527640	45527540,45527958	Gene ID= novel_gene_chr21_1173 TPM= 2.12 Transcript Type= NA
chr21	45643694	45942454	45643694	45942454	+	ENST00000400314.5@PCBP3	ENST00000400314.5	protein_coding	45643694,45735392,45849961,45896208,45899599,45900591,45900997,45909355,45910902,45913951,45917588,45929917,45930786,45935253,45940030,45941670	45643868,45735429,45850095,45896362,45899622,45900623,45901113,45909486,45911030,45914025,45917629,45929995,45930845,45935305,45940199,45942454	Gene ID= ENSG00000183570.16 TPM= 5.31 Transcript Type= protein_coding
chr21	45738259	45739400	45738259	45739400	-	transcript1182.chr21.nnic@NA	transcript1182.chr21.nnic	NA	45738259	45739400	Gene ID= novel_gene_chr21_1183 TPM= 2.12 Transcript Type= NA
chr21	45981769	46004101	45981769	46004101	+	ENST00000612273.1@COL6A1	ENST00000612273.1	protein_coding	45981769,45982634,45984269,45986526,45986944,45987155,45987499,45987610,45989084,45989608,45989752,45990258,45990378,45990773,45990979,45992010,45992164,45992363,45992748,45994167,45997421,45997700,45998121,45998398,45998897,45999153,45999657,46000331,46001253,46001961,46002218,46002527,46003120,46003391	45981947,45982763,45984469,45986685,45987072,45987175,45987519,45987654,45989137,45989652,45989778,45990284,45990422,45990826,45991041,45992072,45992217,45992398,45992810,45994229,45997483,45997762,45998171,45998433,45998959,45999218,45999692,46000370,46001386,46002070,46002401,46002710,46003149,46004101	Gene ID= ENSG00000142156.14 TPM= 94.53 Transcript Type= protein_coding
chr21	45981737	46005050	45981737	46005050	+	ENST00000361866.7@COL6A1	ENST00000361866.7	protein_coding	45981737,45982634,45984269,45986526,45986944,45987155,45987499,45987610,45989084,45989608,45989752,45990258,45990378,45990773,45990979,45992010,45992164,45992363,45992748,45994167,45997421,45997700,45998121,45998398,45998897,45999153,45999657,46000331,46000759,46001253,46001961,46002218,46002527,46003120,46003391	45981947,45982763,45984469,45986685,45987072,45987175,45987519,45987654,45989137,45989652,45989778,45990284,45990422,45990826,45991041,45992072,45992217,45992398,45992810,45994229,45997483,45997762,45998171,45998433,45998959,45999218,45999692,46000367,46000767,46001386,46002070,46002401,46002710,46003149,46005050	Gene ID= ENSG00000142156.14 TPM= 429.11 Transcript Type= protein_coding
chr21	46098108	46129808	46098108	46129808	+	transcript1197.chr21.nic@COL6A2	transcript1197.chr21.nic	protein_coding	46098108,46111450,46111979,46112804,46114008,46115872,46116009,46116377,46116651,46116770,46117400,46117874,46118614,46119030,46119788,46120515,46121061,46121556,46122108,46122496,46122875,46124651,46124885,46125266,46125465,46125785,46126503,46129196	46098173,46111591,46112577,46112824,46114073,46115925,46116053,46116403,46116677,46116814,46117453,46117936,46118676,46119119,46119850,46120577,46121123,46121618,46122158,46122531,46122937,46124713,46124920,46125311,46125617,46126237,46126541,46129808	Gene ID= ENSG00000142173.14 TPM= 56.48 Transcript Type= NA
chr21	46098097	46132849	46098097	46132849	+	ENST00000300527.8@COL6A2	ENST00000300527.8	protein_coding	46098097,46111450,46111979,46112804,46114008,46115872,46116009,46116377,46116651,46116770,46117400,46117874,46118614,46119030,46119788,46120515,46121061,46121556,46122108,46122496,46122875,46124651,46124885,46125266,46125465,46125785,46126503,46131954	46098173,46111591,46112577,46112824,46114073,46115925,46116053,46116403,46116677,46116814,46117453,46117936,46118676,46119119,46119850,46120577,46121123,46121618,46122158,46122531,46122937,46124713,46124920,46125311,46125617,46126237,46126541,46132849	Gene ID= ENSG00000142173.14 TPM= 267.85 Transcript Type= protein_coding
chr21	46128915	46132847	46128915	46132847	+	transcript1213.chr21.nnic@NA	transcript1213.chr21.nnic	NA	46128915	46132847	Gene ID= novel_gene_chr21_1214 TPM= 27.62 Transcript Type= NA
chr21	46161148	46184476	46161148	46184476	-	ENST00000330205.10@SPATC1L	ENST00000330205.10	protein_coding	46184356,46168308,46161916,46161148	46184476,46168658,46162067,46161705	Gene ID= ENSG00000160284.14 TPM= 20.18 Transcript Type= protein_coding
chr21	46188141	46228822	46188141	46228822	-	ENST00000356396.8@LSS	ENST00000356396.8	protein_coding	46228732,46228434,46227552,46222630,46221854,46219476,46216389,46215685,46215180,46213738,46213025,46210688,46209554,46208251,46207428,46206672,46205836,46196202,46195676,46194491,46191881,46191066,46188141	46228822,46228599,46227690,46222738,46221975,46219572,46216524,46215793,46215298,46213835,46213052,46210744,46209625,46208301,46207577,46206768,46205941,46196267,46195756,46194661,46191959,46191235,46188821	Gene ID= ENSG00000160285.14 TPM= 3.37 Transcript Type= protein_coding
chr21	46188446	46228824	46188446	46228824	-	ENST00000397728.7@LSS	ENST00000397728.7	protein_coding	46228732,46228434,46227552,46222630,46221854,46219476,46216389,46215685,46215180,46213738,46213025,46210688,46209554,46208251,46207428,46206672,46205836,46196202,46195676,46194491,46191881,46188446	46228824,46228599,46227690,46222738,46221975,46219572,46216524,46215793,46215298,46213835,46213052,46210744,46209625,46208301,46207577,46206768,46205941,46196267,46195756,46194661,46191959,46191235	Gene ID= ENSG00000160285.14 TPM= 7.62 Transcript Type= protein_coding
chr21	46189124	46228824	46189124	46228824	-	ENST00000457828.6@LSS	ENST00000457828.6	protein_coding	46228434,46227552,46222630,46221854,46219476,46216389,46215685,46215180,46213738,46213025,46210688,46209554,46208251,46207428,46206672,46205836,46196202,46195676,46194491,46191881,46189124	46228824,46227690,46222738,46221975,46219572,46216524,46215793,46215298,46213835,46213052,46210744,46209625,46208301,46207577,46206768,46205941,46196267,46195756,46194661,46191959,46191235	Gene ID= ENSG00000160285.14 TPM= 41.07 Transcript Type= protein_coding
chr21	46199809	46200398	46199809	46200398	+	transcript1226.chr21.nnic@NA	transcript1226.chr21.nnic	NA	46199809	46200398	Gene ID= novel_gene_chr21_1227 TPM= 2.12 Transcript Type= NA
chr21	46235133	46286303	46235133	46286303	-	transcript1229.chr21.nic@MCM3AP	transcript1229.chr21.nic	protein_coding	46285699,46284068,46283615,46280497,46279993,46277527,46275186,46273388,46272561,46270401,46266982,46265925,46265321,46264117,46261280,46260793,46258939,46256789,46254776,46254392,46251529,46246628,46246307,46244807,46243465,46242802,46240811,46236829,46235133	46286303,46285394,46283838,46280575,46280137,46277717,46275325,46273585,46272829,46270563,46267142,46266166,46265523,46264217,46261411,46260906,46259091,46256986,46254844,46254526,46251682,46246886,46246404,46245197,46243722,46242931,46241017,46236979,46235426	Gene ID= ENSG00000160294.10 TPM= 20.71 Transcript Type= NA
chr21	46235133	46286297	46235133	46286297	-	ENST00000397708.1@MCM3AP	ENST00000397708.1	protein_coding	46286151,46284068,46283615,46280497,46279993,46277527,46275186,46273388,46272561,46270401,46266982,46265925,46265321,46264117,46261280,46260793,46258939,46256789,46254776,46254392,46251529,46246628,46246307,46244807,46243465,46242802,46240811,46236829,46235133	46286297,46285394,46283838,46280575,46280137,46277717,46275325,46273585,46272829,46270563,46267142,46266166,46265523,46264217,46261411,46260906,46259091,46256986,46254844,46254526,46251682,46246886,46246404,46245197,46243722,46242931,46241017,46236979,46235426	Gene ID= ENSG00000160294.10 TPM= 15.4 Transcript Type= protein_coding
chr21	46286337	46297751	46286337	46297751	+	ENST00000397701.8@YBEY	ENST00000397701.8	protein_coding	46286337,46286870,46291334,46296162,46297539	46286415,46287123,46291462,46296230,46297751	Gene ID= ENSG00000182362.13 TPM= 9.56 Transcript Type= protein_coding
chr21	46286355	46291930	46286355	46291930	+	ENST00000468924.5@YBEY	ENST00000468924.5	protein_coding	46286355,46286870,46291334	46286415,46287123,46291930	Gene ID= ENSG00000182362.13 TPM= 1.06 Transcript Type= retained_intron
chr21	46321776	46324460	46321776	46324460	-	transcript1248.chr21.nnic@NA	transcript1248.chr21.nnic	NA	46321776	46324460	Gene ID= novel_gene_chr21_1249 TPM= 2.12 Transcript Type= NA
chr21	46415366	46445769	46415366	46445769	+	transcript1251.chr21.nic@PCNT	transcript1251.chr21.nic	protein_coding	46415366,46418204,46421970,46425831,46427622,46428395,46430010,46430507,46431529,46435904,46436979,46438164,46440083,46440855,46442497,46443810,46444694,46445284	46416839,46418306,46422124,46425971,46427795,46428590,46430232,46430657,46432215,46436148,46437081,46438337,46440202,46441084,46442573,46443948,46444821,46445769	Gene ID= ENSG00000160299.16 TPM= 7.44 Transcript Type= NA
chr21	46458862	46546304	46458862	46546304	+	transcript1263.chr21.nic@DIP2A	transcript1263.chr21.nic	protein_coding	46458862,46484757,46490600,46496988,46498582,46504361,46509257,46511417,46529092,46532127,46533524,46534004,46534585,46537224,46537446,46538483,46539877,46541756,46545137,46545881	46459222,46484828,46490719,46497107,46498833,46504489,46509376,46511614,46529183,46532237,46533647,46534113,46534687,46537288,46537539,46538602,46539991,46541895,46545273,46546304	Gene ID= ENSG00000160305.17 TPM= 5.66 Transcript Type= NA
chr21	46458862	46535563	46458862	46535563	+	transcript1266.chr21.nic@DIP2A	transcript1266.chr21.nic	protein_coding	46458862,46484757,46490600,46496988,46498582,46504361,46509257,46511417,46529092,46532127,46533524,46534004,46534585	46459222,46484828,46490719,46497107,46498833,46504489,46509376,46511614,46529183,46532237,46533647,46534113,46535563	Gene ID= ENSG00000160305.17 TPM= 2.47 Transcript Type= NA
chr21	46458862	46535563	46458862	46535563	+	transcript1268.chr21.nic@DIP2A	transcript1268.chr21.nic	protein_coding	46458862,46484757,46490600,46496988,46498582,46504361,46509257,46511417,46529092,46532127,46533524,46534004	46459222,46484828,46490719,46497107,46498833,46504489,46509376,46511614,46529183,46532237,46533647,46535563	Gene ID= ENSG00000160305.17 TPM= 2.47 Transcript Type= NA
chr21	46635167	46664951	46635167	46664951	+	ENST00000355680.7@PRMT2	ENST00000355680.7	protein_coding	46635167,46636439,46636896,46643535,46644306,46648458,46649575,46658745,46660833,46661800,46663383,46664295	46635763,46636547,46636990,46643639,46644488,46648619,46649739,46658920,46660962,46661936,46663554,46664951	Gene ID= ENSG00000160310.17 TPM= 106.22 Transcript Type= protein_coding
chr21	46635615	46664951	46635615	46664951	+	ENST00000397638.6@PRMT2	ENST00000397638.6	protein_coding	46635615,46636896,46643535,46644306,46648458,46649575,46658745,46660833,46661800,46663383,46664295	46635763,46636990,46643639,46644488,46648619,46649739,46658920,46660962,46661936,46663554,46664951	Gene ID= ENSG00000160310.17 TPM= 23.37 Transcript Type= protein_coding
chr21	46635616	46661270	46635616	46661270	+	transcript1281.chr21.nic@PRMT2	transcript1281.chr21.nic	protein_coding	46635616,46636439,46636896,46643535,46644306,46648458,46649575,46658745,46660833	46635763,46636547,46636990,46643639,46644488,46648619,46649739,46658920,46661270	Gene ID= ENSG00000160310.17 TPM= 7.97 Transcript Type= NA
chr21	46635616	46649888	46635616	46649888	+	transcript1294.chr21.nic@PRMT2	transcript1294.chr21.nic	protein_coding	46635616,46636439,46636896,46643535,46644306,46648458,46649575	46635763,46636547,46636990,46643639,46644488,46648619,46649888	Gene ID= ENSG00000160310.17 TPM= 27.62 Transcript Type= NA
chr21	46635674	46649893	46635674	46649893	+	ENST00000397628.5@PRMT2	ENST00000397628.5	protein_coding	46635674,46636896,46643535,46644306,46648458,46649575	46635763,46636990,46643639,46644488,46648619,46649893	Gene ID= ENSG00000160310.17 TPM= 21.24 Transcript Type= protein_coding
chr21	46635653	46652318	46635653	46652318	+	ENST00000334494.8@PRMT2	ENST00000334494.8	protein_coding	46635653,46636896,46643535,46644306,46648458,46649575,46651806	46635763,46636990,46643639,46644488,46648619,46649739,46652318	Gene ID= ENSG00000160310.17 TPM= 1.06 Transcript Type= protein_coding
chr22	11849156	11974218	11849156	11974218	-	transcript8.chr22.nnic@NA	transcript8.chr22.nnic	NA	11974015,11971940,11849156	11974218,11971998,11849410	Gene ID= novel_gene_chr22_15 TPM= 4.25 Transcript Type= NA
chr22	11928919	11974197	11928919	11974197	-	transcript14.chr22.nnic@NA	transcript14.chr22.nnic	NA	11974033,11971940,11928919	11974197,11971998,11929140	Gene ID= novel_gene_chr22_15 TPM= 3.19 Transcript Type= NA
chr22	12602384	12626715	12602384	12626715	+	transcript17.chr22.nnic@AC116618.1	transcript17.chr22.nnic	unprocessed_pseudogene	12602384,12604670,12615409,12620838,12624242,12625317,12626607	12602816,12604739,12615538,12620938,12624333,12625428,12626715	Gene ID= ENSG00000283023.1 TPM= 4.25 Transcript Type= NA
chr22	17084959	17115693	17084959	17115693	+	ENST00000319363.10@IL17RA	ENST00000319363.10	protein_coding	17084959,17097062,17097797,17098775,17100355,17101996,17102139,17103494,17104726,17105591,17105853,17107727,17108307	17085229,17097086,17097943,17098887,17100481,17102043,17102302,17103577,17104810,17105602,17105954,17107768,17115693	Gene ID= ENSG00000177663.13 TPM= 1.06 Transcript Type= protein_coding
chr22	17084959	17115694	17084959	17115694	+	ENST00000612619.1@IL17RA	ENST00000612619.1	protein_coding	17084959,17097062,17097797,17098775,17100355,17101996,17102139,17103494,17104726,17105591,17107727,17108307	17085229,17097086,17097943,17098887,17100481,17102043,17102302,17103577,17104810,17105602,17107768,17115694	Gene ID= ENSG00000177663.13 TPM= 1.06 Transcript Type= protein_coding
chr22	17084973	17086131	17084973	17086131	+	transcript24.chr22.nnic@NA	transcript24.chr22.nnic	NA	17084973	17086131	Gene ID= novel_gene_chr22_25 TPM= 3.19 Transcript Type= NA
chr22	17137520	17159298	17137520	17159298	-	transcript29.chr22.nnic@HDHD5	transcript29.chr22.nnic	protein_coding	17159126,17149542,17148448,17145024,17143098,17141059,17138550,17137520	17159298,17149745,17148560,17145117,17143131,17141218,17138738,17138357	Gene ID= ENSG00000069998.12 TPM= 6.16 Transcript Type= NA
chr22	17137520	17159239	17137520	17159239	-	transcript30.chr22.nic@HDHD5	transcript30.chr22.nic	protein_coding	17158457,17149542,17148448,17145024,17143098,17141059,17138550,17137520	17159239,17149745,17148560,17145117,17143131,17141233,17138738,17138357	Gene ID= ENSG00000069998.12 TPM= 13.33 Transcript Type= NA
chr22	17137520	17159277	17137520	17159277	-	transcript34.chr22.nnic@HDHD5	transcript34.chr22.nnic	protein_coding	17159126,17148448,17145024,17143098,17141059,17138550,17137520	17159277,17148560,17145117,17143131,17141233,17138738,17138357	Gene ID= ENSG00000069998.12 TPM= 7.49 Transcript Type= NA
chr22	17137520	17159277	17137520	17159277	-	ENST00000336737.8@HDHD5	ENST00000336737.8	protein_coding	17159126,17149542,17148448,17145024,17143098,17141059,17138550,17137520	17159277,17149745,17148560,17145117,17143131,17141233,17138738,17138357	Gene ID= ENSG00000069998.12 TPM= 156.72 Transcript Type= protein_coding
chr22	17144415	17145266	17144415	17145266	-	transcript36.chr22.nnic@NA	transcript36.chr22.nnic	NA	17144415	17145266	Gene ID= novel_gene_chr22_37 TPM= 2.12 Transcript Type= NA
chr22	17179306	17199783	17179306	17199783	-	ENST00000330232.8@ADA2	ENST00000330232.8	protein_coding	17199549,17191683,17189942,17188339,17182604,17181820,17179306	17199783,17191810,17190032,17188447,17182761,17182022,17181576	Gene ID= ENSG00000093072.15 TPM= 19.65 Transcript Type= protein_coding
chr22	17179586	17188869	17179586	17188869	+	transcript41.chr22.nnic@NA	transcript41.chr22.nnic	NA	17179586,17181811,17182604,17188339	17181572,17182024,17182761,17188869	Gene ID= novel_gene_chr22_42 TPM= 14.34 Transcript Type= NA
chr22	17369462	17539185	17369462	17539185	+	transcript44.chr22.nnic@CECR2	transcript44.chr22.nnic	protein_coding	17369462,17477588,17497403,17499410,17500631,17503082,17504847,17524118,17537103,17538520,17538640,17538993	17369909,17477682,17497586,17499549,17500735,17503131,17505016,17524271,17537232,17538557,17538731,17539185	Gene ID= ENSG00000099954.18 TPM= 2.12 Transcript Type= NA
chr22	17592136	17628818	17592136	17628818	-	ENST00000253413.9@ATP6V1E1	ENST00000253413.9	protein_coding	17628603,17619461,17613211,17612812,17601092,17600027,17598194,17594529,17592136	17628818,17619526,17613320,17612878,17601181,17600095,17598288,17594616,17592736	Gene ID= ENSG00000131100.12 TPM= 188 Transcript Type= protein_coding
chr22	17621780	17623669	17621780	17623669	+	transcript52.chr22.nnic@NA	transcript52.chr22.nnic	NA	17621780	17623669	Gene ID= novel_gene_chr22_53 TPM= 2.12 Transcript Type= NA
chr22	17638772	17703733	17638772	17703733	+	ENST00000493680.5@BCL2L13	ENST00000493680.5	protein_coding	17638772,17655662,17683214,17688986,17696141,17702243	17638886,17655832,17683321,17689142,17696210,17703733	Gene ID= ENSG00000099968.17 TPM= 5.31 Transcript Type= protein_coding
chr22	17730158	17735219	17730158	17735219	+	transcript71.chr22.nnic@NA	transcript71.chr22.nnic	NA	17730158	17735219	Gene ID= novel_gene_chr22_72 TPM= 46.74 Transcript Type= NA
chr22	17734142	17774495	17734142	17774495	-	ENST00000399767.5@BID	ENST00000399767.5	protein_coding	17774381,17743803,17739349,17738017,17734142	17774495,17744013,17739488,17738229,17735591	Gene ID= ENSG00000015475.18 TPM= 1.06 Transcript Type= protein_coding
chr22	17824752	17875703	17824752	17875703	-	transcript77.chr22.nnic@MICAL3	transcript77.chr22.nnic	protein_coding	17875447,17872750,17871837,17865924,17864899,17841822,17831854,17827644,17824752	17875703,17872854,17872032,17866012,17864986,17842019,17832109,17827784,17826516	Gene ID= ENSG00000243156.7 TPM= 5.49 Transcript Type= NA
chr22	17879798	17897445	17879798	17897445	-	transcript78.chr22.nnic@MICAL3	transcript78.chr22.nnic	protein_coding	17896724,17896246,17895284,17893808,17891485,17889034,17887323,17887170,17879798	17897445,17896363,17895412,17893907,17891632,17889230,17887435,17887234,17886051	Gene ID= ENSG00000243156.7 TPM= 10.62 Transcript Type= NA
chr22	17787649	17818195	17787649	17818195	-	transcript82.chr22.nic@MICAL3	transcript82.chr22.nic	protein_coding	17817311,17816690,17810703,17808844,17793729,17791202,17790998,17787649	17818195,17816784,17810813,17808937,17793794,17791301,17791071,17790916	Gene ID= ENSG00000243156.7 TPM= 24.25 Transcript Type= NA
chr22	17787649	17818163	17787649	17818163	-	transcript83.chr22.nic@MICAL3	transcript83.chr22.nic	protein_coding	17817311,17816690,17810703,17808844,17803811,17791202,17790998,17787649	17818163,17816784,17810813,17808937,17803861,17791301,17791071,17790916	Gene ID= ENSG00000243156.7 TPM= 29.56 Transcript Type= NA
chr22	17830054	17875703	17830054	17875703	-	transcript86.chr22.nnic@MICAL3	transcript86.chr22.nnic	protein_coding	17875447,17872750,17871837,17865924,17864899,17841822,17830054	17875703,17872854,17872032,17866012,17864986,17842019,17832109	Gene ID= ENSG00000243156.7 TPM= 6.55 Transcript Type= NA
chr22	17787649	18024559	17787649	18024559	-	ENST00000441493.6@MICAL3	ENST00000441493.6	protein_coding	18024281,17906549,17904632,17902631,17901878,17900842,17899448,17896724,17896246,17895284,17893808,17891485,17889034,17887323,17887170,17885878,17871837,17865924,17864899,17841822,17831854,17827644,17822947,17822030,17821427,17817311,17816690,17810703,17808844,17791202,17790998,17787649	18024559,17906886,17904839,17902747,17901979,17900997,17899548,17896981,17896361,17895410,17893904,17891632,17889230,17887435,17887232,17886051,17872023,17866012,17864986,17842017,17832107,17827781,17823060,17822170,17821509,17819129,17816784,17810813,17808937,17791301,17791071,17790916	Gene ID= ENSG00000243156.7 TPM= 7.79 Transcript Type= protein_coding
chr22	17839951	17842482	17839951	17842482	-	ENST00000578905.1@MICAL3	ENST00000578905.1	protein_coding	17839951	17842482	Gene ID= ENSG00000243156.7 TPM= 1.06 Transcript Type= retained_intron
chr22	17872935	17875701	17872935	17875701	+	transcript93.chr22.nnic@NA	transcript93.chr22.nnic	NA	17872935	17875701	Gene ID= novel_gene_chr22_94 TPM= 41.07 Transcript Type= NA
chr22	17919078	17922102	17919078	17922102	-	transcript103.chr22.nnic@NA	transcript103.chr22.nnic	NA	17919078	17922102	Gene ID= novel_gene_chr22_104 TPM= 2.12 Transcript Type= NA
chr22	17944080	17948924	17944080	17948924	+	transcript99.chr22.nnic@NA	transcript99.chr22.nnic	NA	17944080	17948924	Gene ID= novel_gene_chr22_100 TPM= 8.5 Transcript Type= NA
chr22	17992185	17995579	17992185	17995579	+	transcript101.chr22.nnic@NA	transcript101.chr22.nnic	NA	17992185	17995579	Gene ID= novel_gene_chr22_102 TPM= 3.19 Transcript Type= NA
chr22	17997048	17998646	17997048	17998646	-	transcript105.chr22.nnic@NA	transcript105.chr22.nnic	NA	17997048	17998646	Gene ID= novel_gene_chr22_106 TPM= 4.25 Transcript Type= NA
chr22	18012594	18014986	18012594	18014986	+	transcript107.chr22.nnic@NA	transcript107.chr22.nnic	NA	18012594	18014986	Gene ID= novel_gene_chr22_108 TPM= 2.12 Transcript Type= NA
chr22	18077923	18105396	18077923	18105396	+	ENST00000329627.11@PEX26	ENST00000329627.11	protein_coding	18077923,18078296,18079874,18083437,18085112,18087972	18078047,18078606,18080014,18083732,18085258,18105396	Gene ID= ENSG00000215193.12 TPM= 6.37 Transcript Type= protein_coding
chr22	18078001	18079174	18078001	18079174	+	transcript122.chr22.nnic@NA	transcript122.chr22.nnic	NA	18078001	18079174	Gene ID= novel_gene_chr22_123 TPM= 2.12 Transcript Type= NA
chr22	18110687	18131154	18110687	18131154	+	ENST00000316027.10@TUBA8	ENST00000316027.10	protein_coding	18110687,18121479,18124156,18126354,18130843	18110839,18121701,18124304,18127034,18131154	Gene ID= ENSG00000183785.14 TPM= 162.69 Transcript Type= protein_coding
chr22	18110793	18131731	18110793	18131731	+	ENST00000330423.7@TUBA8	ENST00000330423.7	protein_coding	18110793,18121479,18124156,18126354,18130843	18110868,18121701,18124304,18127034,18131731	Gene ID= ENSG00000183785.14 TPM= 7.44 Transcript Type= protein_coding
chr22	18149899	18177397	18149899	18177397	+	ENST00000215794.7@USP18	ENST00000215794.7	protein_coding	18149899,18157558,18160172,18161790,18167255,18167890,18169844,18170753,18173150,18173793,18176772	18150222,18157820,18160268,18161935,18167334,18168036,18169939,18170920,18173281,18173842,18177397	Gene ID= ENSG00000184979.9 TPM= 2.12 Transcript Type= protein_coding
chr22	18533646	18537791	18533646	18537791	-	ENST00000610959.4@PI4KAP1	ENST00000610959.4	transcribed_unprocessed_pseudogene	18535859,18535245,18533646	18537791,18535328,18534053	Gene ID= ENSG00000274602.4 TPM= 3.19 Transcript Type= processed_transcript
chr22	18906333	18912088	18906333	18912088	+	transcript143.chr22.nic@DGCR6	transcript143.chr22.nic	protein_coding	18906333,18906565,18911540	18906484,18911028,18912088	Gene ID= ENSG00000183628.12 TPM= 6.11 Transcript Type= NA
chr22	18906223	18912088	18906223	18912088	+	ENST00000331444.10@DGCR6	ENST00000331444.10	protein_coding	18906223,18906565,18910172,18910888,18911540	18906484,18906725,18910272,18911028,18912088	Gene ID= ENSG00000183628.12 TPM= 148.09 Transcript Type= protein_coding
chr22	18906351	18912082	18906351	18912082	+	ENST00000427407.5@DGCR6	ENST00000427407.5	protein_coding	18906351,18906565,18909980,18910172,18910888,18911540	18906484,18906725,18910098,18910272,18911028,18912082	Gene ID= ENSG00000183628.12 TPM= 6.82 Transcript Type= nonsense_mediated_decay
chr22	18906353	18908269	18906353	18908269	+	ENST00000608842.1@DGCR6	ENST00000608842.1	protein_coding	18906353,18906565	18906484,18908269	Gene ID= ENSG00000183628.12 TPM= 1.06 Transcript Type= protein_coding
chr22	18912777	18936553	18912777	18936553	-	ENST00000610940.4@PRODH	ENST00000610940.4	protein_coding	18936390,18936015,18930990,18925688,18925051,18923115,18922817,18922325,18921342,18919706,18919451,18918316,18916890,18913438,18912777	18936553,18936327,18931198,18925722,18925200,18923179,18922933,18922404,18921423,18919798,18919597,18918491,18916988,18913526,18913362	Gene ID= ENSG00000100033.16 TPM= 27.62 Transcript Type= protein_coding
chr22	18916288	18936314	18916288	18936314	-	transcript137.chr22.nnic@PRODH	transcript137.chr22.nnic	protein_coding	18936015,18930990,18925688,18925051,18923115,18922817,18922325,18921342,18919706,18919451,18918316,18916890,18916288	18936314,18931198,18925722,18925200,18923179,18922933,18922404,18921423,18919798,18919597,18918491,18916988,18916616	Gene ID= ENSG00000100033.16 TPM= 2.12 Transcript Type= NA
chr22	19036286	19122454	19036286	19122454	-	ENST00000263196.11@DGCR2	ENST00000263196.11	protein_coding	19122128,19089368,19068100,19064848,19063202,19056986,19048440,19041807,19041058,19036286	19122454,19089490,19068225,19065067,19063278,19057162,19048643,19041959,19041294,19039121	Gene ID= ENSG00000070413.19 TPM= 72.58 Transcript Type= protein_coding
chr22	19036290	19122397	19036290	19122397	-	transcript157.chr22.nnic@DGCR2	transcript157.chr22.nnic	protein_coding	19122128,19089368,19068100,19064848,19063202,19056986,19048440,19041807,19036290	19122397,19089490,19068225,19065067,19063278,19057162,19048643,19041959,19039121	Gene ID= ENSG00000070413.19 TPM= 22.12 Transcript Type= NA
chr22	19039687	19122454	19039687	19122454	-	transcript158.chr22.nic@DGCR2	transcript158.chr22.nic	protein_coding	19122128,19089368,19068100,19064848,19063202,19056986,19048440,19041807,19039687	19122454,19089490,19068225,19065067,19063278,19057162,19048643,19041959,19041294	Gene ID= ENSG00000070413.19 TPM= 5.13 Transcript Type= NA
chr22	19130279	19144684	19130279	19144684	-	ENST00000252137.10@ESS2	ENST00000252137.10	protein_coding	19144506,19142726,19142538,19139855,19139612,19139159,19138215,19137323,19135060,19130279	19144684,19142894,19142633,19140024,19139729,19139292,19138317,19137432,19135175,19134475	Gene ID= ENSG00000100056.11 TPM= 1.06 Transcript Type= protein_coding
chr22	19171395	19172839	19171395	19172839	+	ENST00000565162.2@LINC01311	ENST00000565162.2	antisense_RNA	19171395	19172839	Gene ID= ENSG00000260924.2 TPM= 2.12 Transcript Type= antisense_RNA
chr22	19175575	19178830	19175575	19178830	-	ENST00000215882.9@SLC25A1	ENST00000215882.9	protein_coding	19178580,19178133,19177942,19177727,19177120,19176846,19176578,19176421,19175575	19178830,19178240,19178041,19177865,19177204,19176950,19176693,19176494,19176244	Gene ID= ENSG00000100075.9 TPM= 35.58 Transcript Type= protein_coding
chr22	19175593	19178521	19175593	19178521	-	ENST00000451283.5@SLC25A1	ENST00000451283.5	protein_coding	19178387,19178133,19177942,19177727,19177120,19176846,19176578,19176421,19175593	19178521,19178240,19178041,19177865,19177204,19176950,19176693,19176494,19176244	Gene ID= ENSG00000100075.9 TPM= 5.84 Transcript Type= protein_coding
chr22	19179473	19291714	19179473	19291714	-	ENST00000427926.5@CLTCL1	ENST00000427926.5	protein_coding	19291600,19275623,19253959,19242775,19239275,19235696,19234509,19233422,19233166,19232476,19229838,19226219,19225453,19223891,19222684,19221951,19221377,19219885,19216111,19210326,19208922,19208154,19201329,19199734,19196489,19196266,19191304,19187981,19187558,19183390,19180731,19180199,19179473	19291714,19275830,19254227,19242936,19239388,19235869,19234706,19233622,19233318,19232598,19229975,19226383,19225633,19224054,19222809,19222093,19221611,19220007,19216256,19210509,19209114,19208311,19201493,19199841,19196656,19196415,19191435,19188091,19187728,19183611,19180806,19180238,19179969	Gene ID= ENSG00000070371.15 TPM= 6.9 Transcript Type= protein_coding
chr22	19179473	19291685	19179473	19291685	-	ENST00000621271.4@CLTCL1	ENST00000621271.4	protein_coding	19291600,19275623,19253959,19242775,19239275,19235696,19234509,19233422,19233166,19232476,19229838,19226219,19225453,19223891,19222684,19221951,19221377,19219885,19216111,19210326,19208922,19208154,19201329,19199734,19196489,19196266,19191304,19187981,19183390,19180731,19180199,19179473	19291685,19275830,19254227,19242936,19239388,19235869,19234706,19233622,19233318,19232598,19229975,19226383,19225633,19224054,19222809,19222093,19221611,19220007,19216256,19210509,19209114,19208311,19201493,19199841,19196656,19196415,19191435,19188091,19183611,19180806,19180238,19179969	Gene ID= ENSG00000070371.15 TPM= 6.9 Transcript Type= protein_coding
chr22	19186607	19188899	19186607	19188899	-	transcript180.chr22.nnic@NA	transcript180.chr22.nnic	NA	19186607	19188899	Gene ID= novel_gene_chr22_181 TPM= 2.12 Transcript Type= NA
chr22	19330698	19431733	19330698	19431733	-	ENST00000263208.5@HIRA	ENST00000263208.5	protein_coding	19431440,19410716,19408483,19407184,19405786,19397992,19396787,19394342,19392101,19388484,19387711,19385521,19383620,19377869,19375631,19361727,19361237,19359336,19356890,19356230,19355760,19353996,19353356,19351358,19330698	19431733,19410778,19408593,19407274,19405880,19398087,19396947,19394509,19392214,19388554,19387816,19385736,19383705,19378066,19375792,19361931,19361341,19359484,19357051,19356288,19355865,19354118,19353519,19351446,19331556	Gene ID= ENSG00000100084.14 TPM= 12.75 Transcript Type= protein_coding
chr22	19432543	19436066	19432543	19436066	+	transcript190.chr22.nic@MRPL40	transcript190.chr22.nic	protein_coding	19432543,19433265,19434736	19432859,19433348,19436066	Gene ID= ENSG00000185608.8 TPM= 2.12 Transcript Type= NA
chr22	19431902	19436075	19431902	19436075	+	ENST00000333130.3@MRPL40	ENST00000333130.3	protein_coding	19431902,19433265,19434736,19435638	19432607,19433348,19434894,19436075	Gene ID= ENSG00000185608.8 TPM= 85.5 Transcript Type= protein_coding
chr22	19432579	19436067	19432579	19436067	+	ENST00000443660.5@MRPL40	ENST00000443660.5	protein_coding	19432579,19433265,19434736,19435638	19432859,19433348,19434894,19436067	Gene ID= ENSG00000185608.8 TPM= 4.78 Transcript Type= processed_transcript
chr22	19440886	19447713	19440886	19447713	-	transcript193.chr22.nnic@C22orf39	transcript193.chr22.nnic	protein_coding	19447665,19447378,19444012,19440886	19447713,19447545,19444390,19441694	Gene ID= ENSG00000242259.8 TPM= 4.25 Transcript Type= NA
chr22	19445674	19447719	19445674	19447719	-	transcript206.chr22.nic@C22orf39	transcript206.chr22.nic	protein_coding	19447665,19445674	19447719,19447545	Gene ID= ENSG00000242259.8 TPM= 6.37 Transcript Type= NA
chr22	19443371	19447697	19443371	19447697	-	ENST00000333059.5@C22orf39	ENST00000333059.5	protein_coding	19447665,19447378,19443371	19447697,19447545,19444390	Gene ID= ENSG00000242259.8 TPM= 32.93 Transcript Type= protein_coding
chr22	19449910	19479215	19449910	19479215	-	ENST00000263202.14@UFD1	ENST00000263202.14	protein_coding	19479083,19475470,19475068,19471687,19467873,19465202,19458071,19456853,19456587,19455680,19454749,19449910	19479215,19475602,19475100,19471808,19468003,19465274,19458139,19456918,19456634,19455768,19454830,19450744	Gene ID= ENSG00000070010.18 TPM= 5.31 Transcript Type= protein_coding
chr22	19450621	19479223	19450621	19479223	-	transcript211.chr22.nic@UFD1	transcript211.chr22.nic	protein_coding	19479083,19475496,19475068,19471687,19467873,19465202,19458071,19456853,19456587,19455680,19454749,19450621	19479223,19475602,19475100,19471808,19468003,19465274,19458139,19456918,19456634,19455768,19454830,19450744	Gene ID= ENSG00000070010.18 TPM= 4.25 Transcript Type= NA
chr22	19450621	19479172	19450621	19479172	-	ENST00000399523.5@UFD1	ENST00000399523.5	protein_coding	19479083,19475470,19475068,19471687,19467873,19465202,19458071,19456853,19456587,19455680,19454802,19450621	19479172,19475602,19475100,19471808,19468003,19465274,19458139,19456918,19456634,19455768,19454830,19450744	Gene ID= ENSG00000070010.18 TPM= 4.25 Transcript Type= protein_coding
chr22	19450621	19479172	19450621	19479172	-	ENST00000459854.5@UFD1	ENST00000459854.5	protein_coding	19479083,19475496,19475068,19471687,19467873,19465202,19458071,19456853,19456587,19455680,19450621	19479172,19475602,19475100,19471808,19468003,19465274,19458139,19456918,19456634,19455768,19454830	Gene ID= ENSG00000070010.18 TPM= 3.19 Transcript Type= retained_intron
chr22	19523052	19525423	19523052	19525423	-	ENST00000413119.2@CLDN5	ENST00000413119.2	protein_coding	19525155,19523052	19525423,19524542	Gene ID= ENSG00000184113.9 TPM= 1.59 Transcript Type= protein_coding
chr22	19523027	19524400	19523027	19524400	-	ENST00000618236.1@CLDN5	ENST00000618236.1	protein_coding	19523027	19524400	Gene ID= ENSG00000184113.9 TPM= 83.38 Transcript Type= protein_coding
chr22	19523027	19525383	19523027	19525383	-	ENST00000403084.1@CLDN5	ENST00000403084.1	protein_coding	19523027	19525383	Gene ID= ENSG00000184113.9 TPM= 3.19 Transcript Type= protein_coding
chr22	19714469	19724771	19714469	19724771	+	transcript218.chr22.nic@SEPT5	transcript218.chr22.nic	protein_coding	19714469,19714781,19719602,19719806,19720115,19720320,19720549,19720768,19721640,19721822,19722237,19722428,19723854	19714631,19714791,19719698,19719892,19720238,19720454,19720666,19720869,19721736,19721957,19722339,19723579,19724771	Gene ID= ENSG00000184702.18 TPM= 27.42 Transcript Type= NA
chr22	19717220	19724216	19717220	19724216	+	ENST00000455843.5@SEPT5	ENST00000455843.5	protein_coding	19717220,19719602,19719806,19720115,19720320,19720549,19720768,19721640,19721822,19722237,19722428,19723854	19718818,19719698,19719892,19720238,19720454,19720666,19720869,19721736,19721957,19722339,19723579,19724216	Gene ID= ENSG00000184702.18 TPM= 339.82 Transcript Type= nonsense_mediated_decay
chr22	19718465	19724771	19718465	19724771	+	transcript245.chr22.nic@SEPT5	transcript245.chr22.nic	protein_coding	19718465,19719602,19719806,19720115,19720320,19720549,19720768,19721640,19722237,19722428	19718818,19719698,19719892,19720238,19720454,19720666,19720869,19721957,19722339,19724771	Gene ID= ENSG00000184702.18 TPM= 45.78 Transcript Type= NA
chr22	19714464	19723319	19714464	19723319	+	ENST00000455784.6@SEPT5	ENST00000455784.6	protein_coding	19714464,19714781,19719602,19719806,19720115,19720320,19720549,19720768,19721640,19721822,19722237,19722428	19714631,19714791,19719698,19719892,19720238,19720454,19720666,19720869,19721736,19721957,19722339,19723319	Gene ID= ENSG00000184702.18 TPM= 92.96 Transcript Type= protein_coding
chr22	19718458	19723319	19718458	19723319	+	ENST00000438754.6@SEPT5	ENST00000438754.6	protein_coding	19718458,19719602,19719806,19720115,19720320,19720549,19720768,19721640,19721833,19722237,19722428	19718818,19719698,19719892,19720238,19720454,19720666,19720869,19721736,19721957,19722339,19723319	Gene ID= ENSG00000184702.18 TPM= 350.83 Transcript Type= protein_coding
chr22	19718432	19722629	19718432	19722629	+	ENST00000383045.7@SEPT5	ENST00000383045.7	protein_coding	19718432,19719602,19719806,19720115,19720320,19720549,19720768,19721640,19721822,19722237,19722428	19718818,19719698,19719892,19720238,19720454,19720666,19720869,19721736,19721957,19722339,19722629	Gene ID= ENSG00000184702.18 TPM= 5.42 Transcript Type= protein_coding
chr22	19722945	19724771	19722945	19724771	+	ENST00000366425.3@GP1BB	ENST00000366425.3	protein_coding	19722945,19723854	19723579,19724771	Gene ID= ENSG00000203618.5 TPM= 62.67 Transcript Type= protein_coding
chr22	19788415	19854846	19788415	19854846	-	transcript257.chr22.nic@GNB1L	transcript257.chr22.nic	protein_coding	19854660,19854443,19821228,19820598,19812285,19806659,19802001,19788415	19854846,19854539,19821375,19820723,19812447,19806757,19802216,19788960	Gene ID= ENSG00000185838.13 TPM= 3.19 Transcript Type= NA
chr22	19783224	19854939	19783224	19854939	-	ENST00000329517.10@GNB1L	ENST00000329517.10	protein_coding	19854820,19854443,19821228,19820598,19812285,19806659,19802001,19783224	19854939,19854539,19821375,19820723,19812447,19806757,19802216,19788960	Gene ID= ENSG00000185838.13 TPM= 4.25 Transcript Type= protein_coding
chr22	19788415	19854843	19788415	19854843	-	ENST00000403325.5@GNB1L	ENST00000403325.5	protein_coding	19854443,19821228,19820598,19812285,19806659,19802001,19788415	19854843,19821375,19820723,19812447,19806757,19802216,19788960	Gene ID= ENSG00000185838.13 TPM= 1.06 Transcript Type= protein_coding
chr22	19846146	19854886	19846146	19854886	-	ENST00000405640.1@RTL10	ENST00000405640.1	protein_coding	19854443,19846146	19854886,19852486	Gene ID= ENSG00000215012.8 TPM= 6.37 Transcript Type= protein_coding
chr22	19875522	19941992	19875522	19941992	-	ENST00000400521.6@TXNRD2	ENST00000400521.6	protein_coding	19941701,19931030,19919543,19918860,19918143,19915765,19915214,19911377,19899049,19898039,19895407,19883325,19880622,19880179,19878366,19878090,19877040,19875522	19941992,19931098,19919599,19919004,19918217,19915843,19915276,19911447,19899068,19898130,19895581,19883461,19880717,19880271,19878437,19878187,19877234,19875807	Gene ID= ENSG00000184470.20 TPM= 40.36 Transcript Type= protein_coding
chr22	19875522	19941803	19875522	19941803	-	ENST00000400519.6@TXNRD2	ENST00000400519.6	protein_coding	19941701,19931030,19919543,19918860,19918143,19915765,19915214,19911377,19899049,19898039,19895407,19883325,19880622,19880179,19878366,19878090,19875522	19941803,19931095,19919599,19919004,19918217,19915843,19915276,19911447,19899068,19898130,19895581,19883461,19880717,19880271,19878437,19878187,19877234	Gene ID= ENSG00000184470.20 TPM= 2.12 Transcript Type= protein_coding
chr22	19894258	19941804	19894258	19941804	-	ENST00000334363.14@TXNRD2	ENST00000334363.14	protein_coding	19941701,19931030,19919543,19918860,19918143,19915765,19915214,19911377,19899049,19898039,19895407,19894258	19941804,19931098,19919599,19919004,19918217,19915843,19915276,19911447,19899068,19898130,19895581,19895200	Gene ID= ENSG00000184470.20 TPM= 2.12 Transcript Type= protein_coding
chr22	19941607	19969975	19941607	19969975	+	ENST00000361682.10@COMT	ENST00000361682.10	protein_coding	19941607,19961199,19962527,19963566,19964168,19968536	19941897,19961289,19962815,19963759,19964299,19969975	Gene ID= ENSG00000093010.13 TPM= 11.68 Transcript Type= protein_coding
chr22	19969898	20016836	19969898	20016836	-	transcript269.chr22.nic@ARVCF	transcript269.chr22.nic	protein_coding	20016589,20010455,19990585,19981933,19981211,19979743,19978897,19977958,19977415,19976706,19975686,19974112,19973643,19973119,19972925,19972737,19972358,19971886,19969898	20016836,20010508,19990812,19982091,19981737,19980242,19979080,19978075,19977586,19976723,19975757,19974239,19973793,19973317,19973036,19972827,19972411,19971971,19970743	Gene ID= ENSG00000099889.13 TPM= 8.98 Transcript Type= NA
chr22	19969896	19987215	19969896	19987215	-	transcript273.chr22.nic@ARVCF	transcript273.chr22.nic	protein_coding	19987073,19981933,19981211,19979743,19978897,19977958,19977415,19976706,19975686,19974112,19973643,19973119,19972925,19972737,19972358,19971886,19971216,19969896	19987215,19982091,19981737,19980242,19979080,19978075,19977586,19976723,19975757,19974239,19973793,19973317,19973036,19972827,19972411,19971971,19971335,19970743	Gene ID= ENSG00000099889.13 TPM= 10.04 Transcript Type= NA
chr22	19969898	19987187	19969898	19987187	-	transcript281.chr22.nnic@ARVCF	transcript281.chr22.nnic	protein_coding	19987073,19983673,19981933,19981211,19979743,19978897,19977958,19977415,19975686,19974112,19973643,19973119,19972925,19972737,19972358,19971886,19969898	19987187,19983819,19982091,19981737,19980242,19979080,19978075,19977586,19975757,19974239,19973793,19973317,19973036,19972827,19972411,19971971,19970743	Gene ID= ENSG00000099889.13 TPM= 15.35 Transcript Type= NA
chr22	19969898	19987215	19969898	19987215	-	transcript285.chr22.nic@ARVCF	transcript285.chr22.nic	protein_coding	19987073,19981933,19981211,19979743,19978897,19977958,19977415,19975686,19974112,19973643,19973119,19972925,19972737,19972358,19971886,19969898	19987215,19982091,19981737,19980242,19979080,19978075,19977586,19975757,19974239,19973793,19973317,19973036,19972827,19972411,19971971,19970743	Gene ID= ENSG00000099889.13 TPM= 49.6 Transcript Type= NA
chr22	20021065	20065926	20021065	20065926	+	transcript321.chr22.nic@TANGO2	transcript321.chr22.nic	protein_coding	20021065,20036760,20043355,20052465,20053437,20055943,20061530,20063338,20064542	20021134,20036854,20043443,20052584,20053551,20056013,20061683,20063442,20065926	Gene ID= ENSG00000183597.15 TPM= 27.61 Transcript Type= NA
chr22	20021069	20065925	20021069	20065925	+	ENST00000456048.5@TANGO2	ENST00000456048.5	protein_coding	20021069,20036760,20043355,20052465,20053437,20055943,20061530,20063338,20064542	20021134,20037094,20043443,20052584,20053551,20056013,20061683,20063442,20065925	Gene ID= ENSG00000183597.15 TPM= 33.45 Transcript Type= protein_coding
chr22	20021103	20065925	20021103	20065925	+	transcript326.chr22.nic@TANGO2	transcript326.chr22.nic	protein_coding	20021103,20036760,20043355,20052465,20053437,20055943,20061530,20063338,20064542	20021246,20036854,20043443,20052584,20053551,20056013,20061683,20063598,20065925	Gene ID= ENSG00000183597.15 TPM= 12.84 Transcript Type= NA
chr22	20021134	20065926	20021134	20065926	+	transcript329.chr22.nic@TANGO2	transcript329.chr22.nic	protein_coding	20021134,20036760,20043355,20052465,20053437,20055943,20061530,20063338,20064542	20021298,20036854,20043443,20052584,20053551,20056013,20061683,20063442,20065926	Gene ID= ENSG00000183597.15 TPM= 8.49 Transcript Type= NA
chr22	20021069	20065925	20021069	20065925	+	ENST00000432883.5@TANGO2	ENST00000432883.5	protein_coding	20021069,20036760,20043355,20052465,20055943,20061530,20063338,20064542	20021134,20036854,20043443,20052584,20056013,20061683,20063442,20065925	Gene ID= ENSG00000183597.15 TPM= 5.41 Transcript Type= protein_coding
chr22	20021103	20065926	20021103	20065926	+	transcript336.chr22.nic@TANGO2	transcript336.chr22.nic	protein_coding	20021103,20036760,20043355,20052465,20055943,20061530,20063338,20064542	20021246,20036854,20043443,20052584,20056013,20061683,20063442,20065926	Gene ID= ENSG00000183597.15 TPM= 11.78 Transcript Type= NA
chr22	20021103	20065926	20021103	20065926	+	transcript342.chr22.nic@TANGO2	transcript342.chr22.nic	protein_coding	20021103,20036760,20043355,20052465,20055943,20063338,20064542	20021246,20036854,20043443,20052584,20056013,20063442,20065926	Gene ID= ENSG00000183597.15 TPM= 10.72 Transcript Type= NA
chr22	20021103	20065926	20021103	20065926	+	transcript343.chr22.nic@TANGO2	transcript343.chr22.nic	protein_coding	20021103,20036760,20043355,20052465,20061530,20063338,20064542	20021246,20036854,20043443,20052584,20061683,20063442,20065926	Gene ID= ENSG00000183597.15 TPM= 12.84 Transcript Type= NA
chr22	20021072	20065926	20021072	20065926	+	ENST00000398042.6@TANGO2	ENST00000398042.6	protein_coding	20021072,20036760,20043355,20052465,20061530,20063338,20064542	20021134,20036854,20043443,20052584,20061683,20063442,20065926	Gene ID= ENSG00000183597.15 TPM= 11.78 Transcript Type= protein_coding
chr22	20021108	20065926	20021108	20065926	+	ENST00000327374.8@TANGO2	ENST00000327374.8	protein_coding	20021108,20036760,20043355,20052465,20053437,20055943,20061530,20063338,20064542	20021246,20036854,20043443,20052584,20053551,20056013,20061683,20063442,20065926	Gene ID= ENSG00000183597.15 TPM= 62.66 Transcript Type= protein_coding
chr22	20041987	20045885	20041987	20045885	-	transcript353.chr22.nnic@NA	transcript353.chr22.nnic	NA	20041987	20045885	Gene ID= novel_gene_chr22_354 TPM= 2.12 Transcript Type= NA
chr22	20066232	20067954	20066232	20067954	+	transcript349.chr22.nnic@NA	transcript349.chr22.nnic	NA	20066232	20067954	Gene ID= novel_gene_chr22_350 TPM= 5.31 Transcript Type= NA
chr22	20080232	20111871	20080232	20111871	+	ENST00000351989.7@DGCR8	ENST00000351989.7	protein_coding	20080232,20085687,20087162,20089669,20089976,20091435,20091869,20092809,20094713,20106177,20106592,20107271,20108890,20110025	20080383,20086683,20087321,20089811,20090258,20091632,20091970,20092907,20094795,20106277,20106698,20107398,20109003,20111871	Gene ID= ENSG00000128191.15 TPM= 12.75 Transcript Type= protein_coding
chr22	20082053	20085586	20082053	20085586	-	transcript372.chr22.nnic@NA	transcript372.chr22.nnic	NA	20082053	20085586	Gene ID= novel_gene_chr22_373 TPM= 6.37 Transcript Type= NA
chr22	20111875	20117392	20111875	20117392	-	ENST00000403707.7@TRMT2A	ENST00000403707.7	protein_coding	20117097,20116883,20116038,20115672,20115266,20114965,20114761,20114574,20113686,20113432,20113118,20112911,20111875	20117392,20116972,20116612,20115780,20115447,20115079,20114876,20114685,20113808,20113507,20113234,20113007,20112794	Gene ID= ENSG00000099899.14 TPM= 7.44 Transcript Type= protein_coding
chr22	20111866	20117295	20111866	20117295	-	ENST00000252136.11@TRMT2A	ENST00000252136.11	protein_coding	20116883,20116038,20115672,20115266,20114965,20114761,20114574,20113686,20113432,20113118,20112911,20111866	20117295,20116612,20115780,20115447,20115079,20114876,20114685,20113808,20113507,20113234,20113007,20112794	Gene ID= ENSG00000099899.14 TPM= 2.12 Transcript Type= protein_coding
chr22	20112301	20117258	20112301	20117258	-	transcript363.chr22.nnic@TRMT2A	transcript363.chr22.nnic	protein_coding	20116883,20116038,20115672,20115266,20114965,20114761,20114574,20113686,20113432,20112911,20112301	20117258,20116612,20115780,20115447,20115079,20114876,20114685,20113808,20113507,20113007,20112794	Gene ID= ENSG00000099899.14 TPM= 2.12 Transcript Type= NA
chr22	20112301	20117258	20112301	20117258	-	transcript364.chr22.nic@TRMT2A	transcript364.chr22.nic	protein_coding	20116883,20116038,20114965,20114761,20114574,20113686,20113432,20113118,20112911,20112301	20117258,20116612,20115780,20114876,20114685,20113808,20113507,20113234,20113007,20112794	Gene ID= ENSG00000099899.14 TPM= 3.19 Transcript Type= NA
chr22	20112304	20117245	20112304	20117245	-	ENST00000404751.7@TRMT2A	ENST00000404751.7	protein_coding	20116883,20116038,20115672,20115266,20114965,20114761,20114574,20113686,20113432,20113118,20112911,20112304	20117245,20116612,20115780,20115447,20115079,20114876,20114685,20113808,20113507,20113234,20113007,20112816	Gene ID= ENSG00000099899.14 TPM= 15.93 Transcript Type= protein_coding
chr22	20117424	20127355	20117424	20127355	+	ENST00000402752.5@RANBP1	ENST00000402752.5	protein_coding	20117424,20119013,20122264,20125308,20126303,20126955	20117664,20119149,20122421,20125436,20126368,20127355	Gene ID= ENSG00000099901.16 TPM= 65.85 Transcript Type= protein_coding
chr22	20117548	20127181	20117548	20127181	+	ENST00000331821.7@RANBP1	ENST00000331821.7	protein_coding	20117548,20119013,20122264,20125308,20126303,20126952	20117664,20119149,20122421,20125436,20126368,20127181	Gene ID= ENSG00000099901.16 TPM= 30.8 Transcript Type= protein_coding
chr22	20131279	20148006	20131279	20148006	+	transcript383.chr22.nnic@ZDHHC8	transcript383.chr22.nnic	protein_coding	20131279,20139194,20139478,20139720,20140115,20140617,20140871,20141217,20141421,20142756,20147021,20147644	20132051,20139315,20139635,20139892,20140217,20140708,20141012,20141337,20141530,20143756,20147242,20148006	Gene ID= ENSG00000099904.15 TPM= 5.31 Transcript Type= NA
chr22	20131807	20148007	20131807	20148007	+	ENST00000334554.11@ZDHHC8	ENST00000334554.11	protein_coding	20131807,20139194,20139478,20139720,20140115,20140617,20140871,20141217,20141421,20142756,20145229	20132051,20139315,20139635,20139892,20140217,20140708,20141012,20141337,20141530,20143756,20148007	Gene ID= ENSG00000099904.15 TPM= 11.68 Transcript Type= protein_coding
chr22	20241415	20268531	20241415	20268531	-	ENST00000043402.7@RTN4R	ENST00000043402.7	protein_coding	20268071,20241415	20268531,20243110	Gene ID= ENSG00000040608.13 TPM= 5.31 Transcript Type= protein_coding
chr22	20314276	20320080	20314276	20320080	-	ENST00000248879.7@DGCR6L	ENST00000248879.7	protein_coding	20319879,20319639,20316119,20315336,20314276	20320080,20319799,20316219,20315476,20314824	Gene ID= ENSG00000128185.9 TPM= 163.04 Transcript Type= protein_coding
chr22	20314283	20320009	20314283	20320009	-	ENST00000405465.3@DGCR6L	ENST00000405465.3	protein_coding	20319879,20319639,20315336,20314283	20320009,20319786,20315476,20314824	Gene ID= ENSG00000128185.9 TPM= 7.97 Transcript Type= protein_coding
chr22	20394115	20407678	20394115	20407678	+	ENST00000400451.6@ZNF74	ENST00000400451.6	protein_coding	20394115,20395333,20400632,20401277,20405377	20394662,20395418,20400758,20401372,20407678	Gene ID= ENSG00000185252.18 TPM= 6.37 Transcript Type= protein_coding
chr22	20394128	20407407	20394128	20407407	+	ENST00000403682.7@ZNF74	ENST00000403682.7	protein_coding	20394128,20400632,20401277,20405377	20394662,20400758,20401372,20407407	Gene ID= ENSG00000185252.18 TPM= 1.06 Transcript Type= protein_coding
chr22	20441519	20495883	20441519	20495883	-	ENST00000328879.8@KLHL22	ENST00000328879.8	protein_coding	20495760,20488985,20471350,20464858,20457808,20446443,20441519	20495883,20489244,20471515,20465576,20458000,20446676,20442438	Gene ID= ENSG00000099910.16 TPM= 23.37 Transcript Type= protein_coding
chr22	20507618	20587617	20507618	20587617	+	ENST00000406969.5@MED15	ENST00000406969.5	protein_coding	20507618,20537117,20551436,20553145,20554936,20564450,20566467,20568521,20582611,20582840,20583113,20583330,20584359,20584855,20585101,20585728,20586568	20507735,20537204,20551487,20553174,20555148,20564688,20566817,20568631,20582747,20582967,20583247,20583393,20584425,20585015,20585267,20585826,20587617	Gene ID= ENSG00000099917.17 TPM= 13.1 Transcript Type= protein_coding
chr22	20507602	20587632	20507602	20587632	+	ENST00000292733.11@MED15	ENST00000292733.11	protein_coding	20507602,20537117,20551436,20553145,20554936,20564450,20566467,20568521,20582611,20582840,20583113,20583330,20584359,20584855,20585101,20585728,20586568	20507746,20537204,20551487,20553174,20555148,20564688,20566817,20568631,20582747,20582967,20583247,20583393,20584425,20585015,20585267,20585826,20587632	Gene ID= ENSG00000099917.17 TPM= 37 Transcript Type= protein_coding
chr22	20507610	20587619	20507610	20587619	+	ENST00000263205.11@MED15	ENST00000263205.11	protein_coding	20507610,20537117,20551436,20553145,20554936,20564450,20566467,20568521,20575113,20582611,20582840,20583113,20583330,20584359,20584855,20585101,20585728,20586568	20507746,20537204,20551487,20553174,20555148,20564688,20566817,20568631,20575232,20582747,20582967,20583247,20583393,20584425,20585015,20585267,20585826,20587619	Gene ID= ENSG00000099917.17 TPM= 27.44 Transcript Type= protein_coding
chr22	20517105	20518934	20517105	20518934	-	transcript422.chr22.nnic@NA	transcript422.chr22.nnic	NA	20517105	20518934	Gene ID= novel_gene_chr22_423 TPM= 2.12 Transcript Type= NA
chr22	20570748	20573289	20570748	20573289	-	transcript424.chr22.nnic@NA	transcript424.chr22.nnic	NA	20570748	20573289	Gene ID= novel_gene_chr22_425 TPM= 11.68 Transcript Type= NA
chr22	20707691	20858812	20707691	20858812	-	ENST00000255882.10@PI4KA	ENST00000255882.10	protein_coding	20858570,20838615,20834562,20824326,20820539,20819641,20818483,20813358,20810967,20807362,20804974,20804300,20803191,20801973,20799671,20799093,20798584,20796146,20793193,20765585,20765100,20764817,20761304,20753110,20752903,20751674,20751293,20749905,20747583,20744628,20742608,20742228,20734395,20734043,20733736,20732971,20729892,20729632,20729313,20727774,20727230,20726488,20721298,20718693,20717708,20714628,20714458,20713281,20712693,20712486,20711341,20710699,20709908,20709296,20707691	20858812,20838731,20834655,20824414,20820611,20819900,20818549,20813506,20811032,20807458,20805165,20804400,20803320,20802105,20799766,20799276,20798687,20796314,20793243,20765693,20765236,20764950,20761386,20753180,20753027,20751755,20751376,20749994,20747702,20744720,20742764,20742355,20734553,20734194,20733843,20733098,20730011,20729711,20729506,20727864,20727397,20726541,20721418,20718822,20717778,20714700,20714528,20713390,20712797,20712611,20711461,20710858,20709997,20709379,20708098	Gene ID= ENSG00000241973.10 TPM= 81.26 Transcript Type= protein_coding
chr22	20798478	20858812	20798478	20858812	-	ENST00000485963.5@PI4KA	ENST00000485963.5	protein_coding	20858570,20838615,20834562,20824326,20820539,20819641,20818483,20813358,20810967,20807362,20804974,20804300,20803191,20801973,20799671,20799093,20798478	20858812,20838731,20834655,20824414,20820611,20819900,20818549,20813506,20811032,20807458,20805165,20804400,20803320,20802105,20799766,20799276,20798687	Gene ID= ENSG00000241973.10 TPM= 2.66 Transcript Type= retained_intron
chr22	20815794	20817770	20815794	20817770	+	transcript441.chr22.nnic@NA	transcript441.chr22.nnic	NA	20815794	20817770	Gene ID= novel_gene_chr22_442 TPM= 3.19 Transcript Type= NA
chr22	20858983	20891218	20858983	20891218	+	ENST00000215730.11@SNAP29	ENST00000215730.11	protein_coding	20858983,20870337,20881049,20883471,20887679	20859347,20870533,20881134,20883569,20891218	Gene ID= ENSG00000099940.11 TPM= 12.75 Transcript Type= protein_coding
chr22	20917426	20953749	20917426	20953749	+	ENST00000354336.7@CRKL	ENST00000354336.7	protein_coding	20917426,20933779,20949711	20918245,20934244,20953749	Gene ID= ENSG00000099942.12 TPM= 57.36 Transcript Type= protein_coding
chr22	20944141	20945483	20944141	20945483	-	transcript447.chr22.nnic@NA	transcript447.chr22.nnic	NA	20944141	20945483	Gene ID= novel_gene_chr22_448 TPM= 5.31 Transcript Type= NA
chr22	20981358	20982221	20981358	20982221	-	transcript459.chr22.nnic@NA	transcript459.chr22.nnic	NA	20981358	20982221	Gene ID= novel_gene_chr22_460 TPM= 2.12 Transcript Type= NA
chr22	20999777	21002196	20999777	21002196	-	ENST00000399133.2@THAP7	ENST00000399133.2	protein_coding	21002086,21001832,21001256,21000647,20999777	21002196,21001911,21001411,21000787,21000432	Gene ID= ENSG00000184436.11 TPM= 15.4 Transcript Type= protein_coding
chr22	20999772	21002086	20999772	21002086	-	ENST00000215742.8@THAP7	ENST00000215742.8	protein_coding	21001832,21001256,21000647,20999772	21002086,21001411,21000787,21000432	Gene ID= ENSG00000184436.11 TPM= 6.9 Transcript Type= protein_coding
chr22	20999773	21001795	20999773	21001795	-	ENST00000471073.1@THAP7	ENST00000471073.1	protein_coding	21000647,20999773	21001795,21000432	Gene ID= ENSG00000184436.11 TPM= 9.56 Transcript Type= retained_intron
chr22	20999802	21002106	20999802	21002106	-	ENST00000476667.5@THAP7	ENST00000476667.5	protein_coding	21001832,21000647,20999802	21002106,21001411,21000432	Gene ID= ENSG00000184436.11 TPM= 1.06 Transcript Type= retained_intron
chr22	21001922	21003272	21001922	21003272	+	ENST00000429962.1@THAP7-AS1	ENST00000429962.1	antisense_RNA	21001922,21002918	21002829,21003272	Gene ID= ENSG00000230513.1 TPM= 2.12 Transcript Type= antisense_RNA
chr22	21001886	21010125	21001886	21010125	+	ENST00000436079.1@THAP7-AS1	ENST00000436079.1	antisense_RNA	21001886,21009350	21002829,21010125	Gene ID= ENSG00000230513.1 TPM= 1.06 Transcript Type= antisense_RNA
chr22	21468097	21469933	21468097	21469933	+	transcript484.chr22.nic@TMEM191C	transcript484.chr22.nic	protein_coding	21468097,21468354,21468779,21468944,21469274,21469494,21469617	21468202,21468431,21468835,21469062,21469346,21469534,21469933	Gene ID= ENSG00000206140.10 TPM= 3.19 Transcript Type= NA
chr22	21473009	21517526	21473009	21517526	-	transcript474.chr22.nic@PI4KAP2	transcript474.chr22.nic	transcribed_unprocessed_pseudogene	21517325,21491994,21488224,21487872,21487565,21486800,21484005,21483020,21479930,21479759,21478585,21477997,21477790,21476644,21476002,21475211,21474597,21473009	21517526,21492094,21488381,21488023,21487672,21486927,21484134,21483090,21480002,21479829,21478694,21478101,21477915,21476764,21476160,21475300,21474680,21473405	Gene ID= ENSG00000183506.17 TPM= 8.76 Transcript Type= NA
chr22	21473009	21517526	21473009	21517526	-	transcript481.chr22.nnic@PI4KAP2	transcript481.chr22.nnic	transcribed_unprocessed_pseudogene	21517325,21491994,21484005,21483020,21479930,21479759,21478585,21477997,21477790,21476644,21476002,21474597,21473009	21517526,21492094,21484134,21483090,21480002,21479829,21478694,21478101,21477915,21476764,21476160,21474680,21473405	Gene ID= ENSG00000183506.17 TPM= 2.12 Transcript Type= NA
chr22	21473023	21488382	21473023	21488382	-	ENST00000462560.6@PI4KAP2	ENST00000462560.6	transcribed_unprocessed_pseudogene	21488224,21487872,21487565,21486800,21484005,21483020,21479930,21479759,21478585,21477997,21477790,21476002,21475211,21474597,21473023	21488382,21488023,21487672,21486927,21484134,21483090,21480002,21479829,21478694,21478101,21477915,21476764,21475300,21474680,21473405	Gene ID= ENSG00000183506.17 TPM= 5.58 Transcript Type= retained_intron
chr22	21477413	21517520	21477413	21517520	-	ENST00000479693.1@PI4KAP2	ENST00000479693.1	transcribed_unprocessed_pseudogene	21517325,21491994,21488224,21487872,21487565,21486800,21484005,21483020,21479930,21479759,21478585,21477997,21477413	21517520,21492094,21488381,21488023,21487672,21486927,21484134,21483090,21480002,21479829,21478694,21478101,21477915	Gene ID= ENSG00000183506.17 TPM= 2.39 Transcript Type= retained_intron
chr22	21567547	21624034	21567547	21624034	+	ENST00000342192.8@UBE2L3	ENST00000342192.8	protein_coding	21567547,21592861,21610857,21621515	21567771,21592956,21611043,21624034	Gene ID= ENSG00000185651.14 TPM= 48.86 Transcript Type= protein_coding
chr22	21567730	21624034	21567730	21624034	+	ENST00000496722.1@UBE2L3	ENST00000496722.1	protein_coding	21567730,21592861,21610857,21621515	21568377,21592956,21611043,21624034	Gene ID= ENSG00000185651.14 TPM= 5.31 Transcript Type= retained_intron
chr22	21567547	21624034	21567547	21624034	+	ENST00000545681.2@UBE2L3	ENST00000545681.2	protein_coding	21567547,21610857,21621515	21567771,21611043,21624034	Gene ID= ENSG00000185651.14 TPM= 5.31 Transcript Type= protein_coding
chr22	21628089	21630064	21628089	21630064	-	ENST00000415762.6@YDJC	ENST00000415762.6	protein_coding	21629851,21629543,21629308,21629010,21628089	21630064,21629761,21629407,21629187,21628787	Gene ID= ENSG00000161179.13 TPM= 3.19 Transcript Type= nonsense_mediated_decay
chr22	21628089	21630064	21628089	21630064	-	ENST00000292778.10@YDJC	ENST00000292778.10	protein_coding	21629851,21629602,21629308,21629010,21628089	21630064,21629761,21629407,21629187,21628787	Gene ID= ENSG00000161179.13 TPM= 3.19 Transcript Type= protein_coding
chr22	21628089	21630055	21628089	21630055	-	transcript499.chr22.nnic@YDJC	transcript499.chr22.nnic	protein_coding	21629851,21629308,21629010,21628089	21630055,21629407,21629187,21628787	Gene ID= ENSG00000161179.13 TPM= 3.19 Transcript Type= NA
chr22	21628089	21630031	21628089	21630031	-	ENST00000468686.5@YDJC	ENST00000468686.5	protein_coding	21629308,21628089	21630031,21628787	Gene ID= ENSG00000161179.13 TPM= 1.06 Transcript Type= retained_intron
chr22	21642261	21644298	21642261	21644298	+	ENST00000248958.4@SDF2L1	ENST00000248958.4	protein_coding	21642261,21642862,21643894	21642523,21643058,21644298	Gene ID= ENSG00000128228.4 TPM= 80.72 Transcript Type= protein_coding
chr22	21666040	21698276	21666040	21698276	+	ENST00000406385.1@PPIL2	ENST00000406385.1	protein_coding	21666040,21669913,21670566,21670997,21672330,21675064,21681299,21682437,21683182,21684753,21686483,21686892,21687643,21688073,21688732,21693816,21694593,21694755,21694937,21695394,21696031	21666131,21669962,21670611,21671059,21672381,21675115,21681390,21682526,21683257,21684913,21686558,21686998,21687732,21688106,21688849,21693872,21694665,21694817,21695070,21695496,21698276	Gene ID= ENSG00000100023.18 TPM= 4.25 Transcript Type= protein_coding
chr22	21697544	21735834	21697544	21735834	-	ENST00000339468.7@YPEL1	ENST00000339468.7	protein_coding	21735615,21710628,21703839,21703370,21697544	21735834,21710908,21703882,21703478,21701218	Gene ID= ENSG00000100027.14 TPM= 6.37 Transcript Type= protein_coding
chr22	21769040	21867680	21769040	21867680	-	ENST00000398822.7@MAPK1	ENST00000398822.7	protein_coding	21867322,21807664,21805850,21799012,21788694,21788257,21772873,21769040	21867680,21807846,21806039,21799128,21788808,21788388,21772982,21769320	Gene ID= ENSG00000100030.14 TPM= 10.62 Transcript Type= protein_coding
chr22	21816295	21817857	21816295	21817857	+	transcript530.chr22.nnic@NA	transcript530.chr22.nnic	NA	21816295	21817857	Gene ID= novel_gene_chr22_531 TPM= 3.19 Transcript Type= NA
chr22	21850650	21853346	21850650	21853346	+	transcript532.chr22.nnic@NA	transcript532.chr22.nnic	NA	21850650	21853346	Gene ID= novel_gene_chr22_533 TPM= 3.19 Transcript Type= NA
chr22	21919420	21952837	21919420	21952837	-	ENST00000263212.9@PPM1F	ENST00000263212.9	protein_coding	21952792,21945843,21939532,21934024,21933391,21931148,21925569,21919420	21952837,21946108,21939680,21934226,21933579,21931291,21925662,21923471	Gene ID= ENSG00000100034.13 TPM= 15.93 Transcript Type= protein_coding
chr22	21938274	21943415	21938274	21943415	+	transcript540.chr22.nnic@NA	transcript540.chr22.nnic	NA	21938274	21943415	Gene ID= novel_gene_chr22_541 TPM= 13.81 Transcript Type= NA
chr22	21957031	21982750	21957031	21982750	-	ENST00000398793.6@TOP3B	ENST00000398793.6	protein_coding	21982414,21975640,21974357,21972612,21971877,21970210,21968619,21967603,21965285,21964161,21963923,21962747,21962429,21960321,21959587,21959132,21958492,21957031	21982750,21975807,21974488,21972718,21971951,21970406,21968775,21967716,21965375,21964315,21964028,21962893,21962602,21960449,21959736,21959232,21958693,21957595	Gene ID= ENSG00000100038.19 TPM= 3.19 Transcript Type= protein_coding
chr22	21957025	21982816	21957025	21982816	-	ENST00000357179.9@TOP3B	ENST00000357179.9	protein_coding	21982730,21975640,21974357,21972612,21971877,21970210,21968619,21967603,21965285,21964161,21963923,21962747,21962429,21960321,21959587,21959132,21958492,21957025	21982816,21975807,21974488,21972718,21971951,21970406,21968775,21967716,21965375,21964315,21964028,21962893,21962602,21960449,21959736,21959232,21958693,21957595	Gene ID= ENSG00000100038.19 TPM= 10.62 Transcript Type= protein_coding
chr22	22298111	22321317	22298111	22321317	+	transcript550.chr22.nnic@AC245060.4	transcript550.chr22.nnic	unprocessed_pseudogene	22298111,22303224,22303943,22306833,22307106,22307533,22308697,22309736,22310226,22318899	22298211,22303297,22304114,22307021,22307245,22307591,22308819,22309883,22310401,22321317	Gene ID= ENSG00000272779.1 TPM= 11.68 Transcript Type= NA
chr22	22298111	22309693	22298111	22309693	+	transcript555.chr22.nnic@AC245060.4	transcript555.chr22.nnic	unprocessed_pseudogene	22298111,22303224,22303943,22306790,22307106	22298211,22303297,22304114,22307021,22309693	Gene ID= ENSG00000272779.1 TPM= 5.31 Transcript Type= NA
chr22	22298111	22309693	22298111	22309693	+	transcript561.chr22.nnic@AC245060.4	transcript561.chr22.nnic	unprocessed_pseudogene	22298111,22303224,22303943,22306833,22307106	22298211,22303297,22304114,22307021,22309693	Gene ID= ENSG00000272779.1 TPM= 3.19 Transcript Type= NA
chr22	22686716	22906799	22686716	22906799	+	transcript571.chr22.nnic@IGLV3-25	transcript571.chr22.nnic	IG_V_gene	22686716,22686981,22904993,22906342	22686814,22687285,22905025,22906799	Gene ID= ENSG00000211659.2 TPM= 2.12 Transcript Type= NA
chr22	22900976	22901437	22900976	22901437	+	ENST00000390323.2@IGLC2	ENST00000390323.2	IG_C_gene	22900976	22901437	Gene ID= ENSG00000211677.2 TPM= 1.06 Transcript Type= IG_C_gene
chr22	23070361	23125037	23070361	23125037	+	ENST00000615612.1@GNAZ	ENST00000615612.1	protein_coding	23070361,23095247,23123087	23070570,23096418,23125037	Gene ID= ENSG00000128266.8 TPM= 6.37 Transcript Type= protein_coding
chr22	23180210	23318037	23180210	23318037	+	ENST00000305877.12@BCR	ENST00000305877.12	protein_coding	23180210,23253799,23260950,23261355,23268408,23271532,23273081,23273634,23283977,23285033,23287159,23288097,23289517,23290339,23292541,23295024,23309424,23310324,23311697,23312887,23313968,23314552,23315433	23182239,23253980,23261054,23261540,23268515,23271592,23273133,23273774,23284098,23285201,23287278,23288172,23289621,23290413,23292638,23295155,23309483,23310433,23311836,23313021,23314073,23314714,23318037	Gene ID= ENSG00000186716.20 TPM= 21.24 Transcript Type= protein_coding
chr22	23765834	23767972	23765834	23767972	-	transcript597.chr22.nnic@CHCHD10	transcript597.chr22.nnic	protein_coding	23767834,23767374,23766124,23765834	23767972,23767593,23766275,23765979	Gene ID= ENSG00000250479.8 TPM= 15.22 Transcript Type= NA
chr22	23765834	23768443	23765834	23768443	-	ENST00000484558.2@CHCHD10	ENST00000484558.2	protein_coding	23767834,23767374,23766128,23765834	23768443,23767593,23766275,23766026	Gene ID= ENSG00000250479.8 TPM= 368.39 Transcript Type= protein_coding
chr22	23765834	23767942	23765834	23767942	-	ENST00000401675.7@CHCHD10	ENST00000401675.7	protein_coding	23767834,23767374,23766128,23765834	23767942,23767593,23766296,23766026	Gene ID= ENSG00000250479.8 TPM= 38.06 Transcript Type= protein_coding
chr22	23772819	23784316	23772819	23784316	+	ENST00000215743.7@MMP11	ENST00000215743.7	protein_coding	23772819,23779187,23780359,23780582,23780859,23781193,23782226,23783411	23772978,23779416,23780502,23780715,23781100,23781409,23782483,23784316	Gene ID= ENSG00000099953.9 TPM= 11.68 Transcript Type= protein_coding
chr22	23786994	23834516	23786994	23834516	+	ENST00000407422.7@SMARCB1	ENST00000407422.7	protein_coding	23786994,23791756,23793559,23800944,23803295,23816770,23825225,23833572,23834141	23787262,23791867,23793688,23801081,23803422,23816936,23825415,23833703,23834516	Gene ID= ENSG00000099956.18 TPM= 74.62 Transcript Type= protein_coding
chr22	23786974	23834516	23786974	23834516	+	ENST00000263121.11@SMARCB1	ENST00000263121.11	protein_coding	23786974,23791756,23793559,23800944,23803295,23816770,23825225,23833572,23834141	23787262,23791894,23793688,23801081,23803422,23816936,23825415,23833703,23834516	Gene ID= ENSG00000099956.18 TPM= 84.18 Transcript Type= protein_coding
chr22	23786963	23834516	23786963	23834516	+	ENST00000344921.10@SMARCB1	ENST00000344921.10	protein_coding	23786963,23791756,23793559,23800944,23803295,23816770,23825225,23833572,23834141	23787262,23791867,23793688,23801135,23803422,23816936,23825415,23833703,23834516	Gene ID= ENSG00000099956.18 TPM= 5.05 Transcript Type= protein_coding
chr22	23834503	23839006	23834503	23839006	-	ENST00000406855.7@DERL3	ENST00000406855.7	protein_coding	23838895,23838711,23838564,23838352,23837659,23837064,23834503	23839006,23838776,23838637,23838445,23837854,23837154,23834932	Gene ID= ENSG00000099958.14 TPM= 2.12 Transcript Type= protein_coding
chr22	23834503	23839004	23834503	23839004	-	transcript625.chr22.nnic@DERL3	transcript625.chr22.nnic	protein_coding	23838895,23838711,23838564,23838352,23837659,23837064,23834503	23839004,23838776,23838637,23838445,23837854,23837154,23834979	Gene ID= ENSG00000099958.14 TPM= 3.19 Transcript Type= NA
chr22	23856703	23886309	23856703	23886309	+	ENST00000345044.10@SLC2A11	ENST00000345044.10	protein_coding	23856703,23862104,23868481,23875117,23877042,23877721,23882459,23882759,23883772,23883949,23884302,23884649	23856991,23862202,23868641,23875241,23877171,23877869,23882646,23882869,23883873,23884024,23884429,23886309	Gene ID= ENSG00000133460.19 TPM= 4.25 Transcript Type= protein_coding
chr22	23856743	23882952	23856743	23882952	+	transcript621.chr22.nic@SLC2A11	transcript621.chr22.nic	protein_coding	23856743,23862104,23868481,23875117,23877042,23882459,23882759	23856991,23862202,23868641,23875241,23877171,23882646,23882952	Gene ID= ENSG00000133460.19 TPM= 2.84 Transcript Type= NA
chr22	23857136	23882952	23857136	23882952	+	transcript622.chr22.nic@SLC2A11	transcript622.chr22.nic	protein_coding	23857136,23862104,23868481,23875117,23877042,23882459,23882759	23857531,23862202,23868641,23875241,23877171,23882646,23882952	Gene ID= ENSG00000133460.19 TPM= 2.84 Transcript Type= NA
chr22	23857852	23882952	23857852	23882952	+	transcript623.chr22.nic@SLC2A11	transcript623.chr22.nic	protein_coding	23857852,23862104,23868481,23875117,23877042,23882459,23882759	23858029,23862202,23868641,23875241,23877171,23882646,23882952	Gene ID= ENSG00000133460.19 TPM= 6.02 Transcript Type= NA
chr22	23894004	23895226	23894004	23895226	+	ENST00000215754.7@MIF	ENST00000215754.7	protein_coding	23894004,23894772,23895040	23894582,23894944,23895226	Gene ID= ENSG00000240972.1 TPM= 350.51 Transcript Type= protein_coding
chr22	23894698	23895227	23894698	23895227	+	ENST00000498385.1@MIF	ENST00000498385.1	protein_coding	23894698,23895040	23894944,23895227	Gene ID= ENSG00000240972.1 TPM= 8.5 Transcript Type= retained_intron
chr22	23957414	23961186	23957414	23961186	-	ENST00000290765.8@GSTT2B	ENST00000290765.8	protein_coding	23961020,23960294,23958551,23958285,23957414	23961186,23960381,23958701,23958458,23957932	Gene ID= ENSG00000133433.10 TPM= 16.99 Transcript Type= protein_coding
chr22	23971365	23974584	23971365	23974584	-	ENST00000398344.8@DDT	ENST00000398344.8	protein_coding	23974307,23973768,23971365	23974584,23973943,23971623	Gene ID= ENSG00000099977.13 TPM= 504.53 Transcript Type= protein_coding
chr22	24011315	24178628	24011315	24178628	+	ENST00000263119.9@CABIN1	ENST00000263119.9	protein_coding	24011315,24035444,24036089,24038348,24041139,24042904,24049091,24050825,24054873,24056192,24059227,24059924,24061947,24062959,24064035,24066987,24070800,24072354,24076169,24083228,24084579,24085006,24087452,24091583,24095931,24098014,24113566,24119367,24134302,24164400,24165530,24166639,24168447,24171713,24176111,24177504,24178053	24011367,24035520,24036181,24038461,24041273,24043084,24049220,24050974,24055159,24056360,24059363,24060141,24062025,24063146,24064187,24067181,24071042,24072510,24076284,24083389,24084785,24085151,24087713,24091843,24096082,24098192,24113748,24119698,24134415,24164563,24165626,24167313,24168521,24171995,24176275,24177817,24178628	Gene ID= ENSG00000099991.17 TPM= 5.84 Transcript Type= protein_coding
chr22	24011386	24056304	24011386	24056304	+	transcript647.chr22.nic@CABIN1	transcript647.chr22.nic	protein_coding	24011386,24035444,24036089,24038348,24041139,24042904,24049091,24050825,24054873,24056192	24011728,24035520,24036181,24038461,24041273,24043084,24049220,24050974,24055159,24056304	Gene ID= ENSG00000099991.17 TPM= 3.19 Transcript Type= NA
chr22	24155981	24178628	24155981	24178628	+	transcript648.chr22.nic@CABIN1	transcript648.chr22.nic	protein_coding	24155981,24164400,24165530,24166639,24168447,24171713,24176111,24177504,24178053	24156076,24164563,24165626,24167313,24168521,24171995,24176275,24177817,24178628	Gene ID= ENSG00000099991.17 TPM= 6.9 Transcript Type= NA
chr22	24109374	24112830	24109374	24112830	-	transcript654.chr22.nnic@NA	transcript654.chr22.nnic	NA	24109374	24112830	Gene ID= novel_gene_chr22_655 TPM= 4.25 Transcript Type= NA
chr22	24219660	24245129	24219660	24245129	-	transcript658.chr22.nic@GGT5	transcript658.chr22.nic	protein_coding	24244553,24233874,24233498,24232823,24232051,24231384,24226631,24226076,24225546,24225245,24224996,24220492,24219660	24245129,24234004,24233593,24233018,24232208,24231530,24226767,24226266,24225652,24225411,24225106,24220584,24220116	Gene ID= ENSG00000099998.17 TPM= 6.37 Transcript Type= NA
chr22	24219654	24245142	24219654	24245142	-	ENST00000327365.8@GGT5	ENST00000327365.8	protein_coding	24244553,24233874,24233498,24232823,24232051,24231384,24226631,24226076,24225546,24225245,24224996,24219654	24245142,24234004,24233593,24233018,24232208,24231530,24226767,24226266,24225652,24225411,24225106,24220116	Gene ID= ENSG00000099998.17 TPM= 22.84 Transcript Type= protein_coding
chr22	24219654	24245078	24219654	24245078	-	ENST00000263112.11@GGT5	ENST00000263112.11	protein_coding	24244553,24233874,24232823,24232051,24231384,24226631,24226076,24225546,24225245,24224996,24219654	24245078,24234004,24233018,24232208,24231530,24226767,24226266,24225652,24225411,24225106,24220116	Gene ID= ENSG00000099998.17 TPM= 4.78 Transcript Type= protein_coding
chr22	24270817	24417739	24270817	24417739	+	ENST00000437398.5@SPECC1L	ENST00000437398.5	protein_coding	24270817,24302195,24313313,24321288,24324220,24328846,24330256,24334410,24338386,24347086,24363261,24365476,24369218,24411588,24412648,24414534	24270983,24302384,24313466,24322918,24324427,24328919,24330431,24334573,24338477,24347176,24363344,24365632,24369320,24411704,24412707,24417739	Gene ID= ENSG00000100014.19 TPM= 3.72 Transcript Type= protein_coding
chr22	24270840	24417740	24270840	24417740	+	ENST00000314328.13@SPECC1L	ENST00000314328.13	protein_coding	24270840,24276700,24302195,24313313,24321288,24324220,24328846,24330256,24334410,24338386,24347086,24363261,24365476,24369218,24411588,24412648,24414534	24270983,24276803,24302384,24313466,24322918,24324427,24328919,24330431,24334573,24338477,24347176,24363344,24365632,24369320,24411704,24412707,24417740	Gene ID= ENSG00000100014.19 TPM= 3.72 Transcript Type= protein_coding
chr22	24270818	24328873	24270818	24328873	+	transcript674.chr22.nic@SPECC1L-ADORA2A	transcript674.chr22.nic	protein_coding	24270818,24276700,24302195,24313313,24321288,24324220,24328846	24270983,24276803,24302384,24313466,24322918,24324427,24328873	Gene ID= ENSG00000258555.6 TPM= 2.12 Transcript Type= NA
chr22	24316280	24317626	24316280	24317626	-	transcript680.chr22.nnic@NA	transcript680.chr22.nnic	NA	24316280	24317626	Gene ID= novel_gene_chr22_681 TPM= 2.12 Transcript Type= NA
chr22	24423631	24442356	24423631	24442356	+	transcript683.chr22.nic@ADORA2A	transcript683.chr22.nic	protein_coding	24423631,24433131,24440583	24423957,24433736,24442356	Gene ID= ENSG00000128271.21 TPM= 22.31 Transcript Type= NA
chr22	24540438	24555316	24540438	24555316	-	ENST00000435822.5@GUCD1	ENST00000435822.5	protein_coding	24554949,24548917,24547908,24546914,24543842,24540438	24555316,24549001,24548073,24547005,24544083,24543097	Gene ID= ENSG00000138867.16 TPM= 112.59 Transcript Type= protein_coding
chr22	24540423	24555935	24540423	24555935	-	ENST00000621833.4@GUCD1	ENST00000621833.4	protein_coding	24555615,24548917,24547908,24546914,24543842,24540423	24555935,24549001,24548073,24547005,24544083,24543100	Gene ID= ENSG00000138867.16 TPM= 40.36 Transcript Type= protein_coding
chr22	24555968	24576920	24555968	24576920	+	transcript692.chr22.nnic@SNRPD3	transcript692.chr22.nnic	protein_coding	24555968,24557657,24567984,24571916,24576522	24556071,24557800,24568176,24572486,24576920	Gene ID= ENSG00000100028.11 TPM= 5.31 Transcript Type= NA
chr22	24562657	24566966	24562657	24566966	-	transcript700.chr22.nnic@NA	transcript700.chr22.nnic	NA	24562657	24566966	Gene ID= novel_gene_chr22_701 TPM= 2.12 Transcript Type= NA
chr22	24585635	24593184	24585635	24593184	-	transcript702.chr22.nic@LRRC75B	transcript702.chr22.nic	protein_coding	24592863,24592217,24589821,24588679,24588214,24585635	24593184,24592423,24589949,24589265,24588329,24586411	Gene ID= ENSG00000178026.12 TPM= 2.12 Transcript Type= NA
chr22	24585635	24593184	24585635	24593184	-	transcript703.chr22.nic@LRRC75B	transcript703.chr22.nic	protein_coding	24592863,24592217,24589821,24588679,24588214,24585635	24593184,24592423,24589949,24589393,24588329,24586411	Gene ID= ENSG00000178026.12 TPM= 3.19 Transcript Type= NA
chr22	24585620	24593063	24585620	24593063	-	ENST00000318753.12@LRRC75B	ENST00000318753.12	protein_coding	24592863,24589821,24588214,24585620	24593063,24589949,24588329,24586411	Gene ID= ENSG00000178026.12 TPM= 5.84 Transcript Type= protein_coding
chr22	24585620	24593066	24585620	24593066	-	ENST00000446942.5@LRRC75B	ENST00000446942.5	protein_coding	24592863,24589821,24588679,24588214,24585620	24593066,24589949,24589265,24588329,24586411	Gene ID= ENSG00000178026.12 TPM= 3.72 Transcript Type= nonsense_mediated_decay
chr22	24806225	24814192	24806225	24814192	+	transcript718.chr22.nnic@SGSM1	transcript718.chr22.nnic	protein_coding	24806225,24806441,24814009	24806344,24806484,24814192	Gene ID= ENSG00000167037.18 TPM= 5.31 Transcript Type= NA
chr22	25448085	25461200	25448085	25461200	+	transcript732.chr22.nnic@CRYBB2P1	transcript732.chr22.nnic	transcribed_unprocessed_pseudogene	25448085,25453316,25455712,25457259,25459416	25448284,25453434,25455840,25457401,25461200	Gene ID= ENSG00000100058.12 TPM= 2.12 Transcript Type= NA
chr22	25742132	25762124	25742132	25762124	+	transcript755.chr22.nic@MYO18B	transcript755.chr22.nic	protein_coding	25742132,25760984	25742293,25762124	Gene ID= ENSG00000133454.15 TPM= 7.44 Transcript Type= NA
chr22	25742234	26030644	25742234	26030644	+	ENST00000407587.6@MYO18B	ENST00000407587.6	protein_coding	25742234,25760984,25763231,25768115,25770110,25770872,25772334,25777583,25780056,25781734,25785428,25797953,25823505,25826409,25828776,25832917,25835293,25843735,25846100,25847430,25851470,25868320,25874286,25876189,25877959,25890756,25891304,25895156,25898307,25902613,25903631,25908322,25910946,25921257,25946137,25947712,25950367,25952286,25955179,25992363,26003265,26004718,26026445,26030443	25742293,25761131,25763389,25769428,25770176,25770984,25772510,25777781,25780198,25781834,25785491,25798097,25823678,25826499,25828968,25832997,25835443,25843894,25846283,25847652,25851579,25868385,25874414,25876332,25878048,25890875,25891412,25895280,25898461,25902736,25903831,25908432,25911050,25921409,25946250,25947828,25950450,25952423,25955364,25992493,26003309,26004855,26027690,26030644	Gene ID= ENSG00000133454.15 TPM= 220.93 Transcript Type= protein_coding
chr22	25742177	25743458	25742177	25743458	+	transcript762.chr22.nnic@NA	transcript762.chr22.nnic	NA	25742177	25743458	Gene ID= novel_gene_chr22_763 TPM= 2.12 Transcript Type= NA
chr22	25787745	25789644	25787745	25789644	+	transcript764.chr22.nnic@NA	transcript764.chr22.nnic	NA	25787745	25789644	Gene ID= novel_gene_chr22_765 TPM= 2.12 Transcript Type= NA
chr22	25792482	25793939	25792482	25793939	+	transcript766.chr22.nnic@NA	transcript766.chr22.nnic	NA	25792482	25793939	Gene ID= novel_gene_chr22_767 TPM= 2.12 Transcript Type= NA
chr22	25810435	25813845	25810435	25813845	-	transcript776.chr22.nnic@NA	transcript776.chr22.nnic	NA	25810435	25813845	Gene ID= novel_gene_chr22_777 TPM= 7.44 Transcript Type= NA
chr22	25855287	25856011	25855287	25856011	-	transcript778.chr22.nnic@NA	transcript778.chr22.nnic	NA	25855287	25856011	Gene ID= novel_gene_chr22_779 TPM= 2.12 Transcript Type= NA
chr22	25901808	25904500	25901808	25904500	-	transcript774.chr22.nnic@NA	transcript774.chr22.nnic	NA	25901808	25904500	Gene ID= novel_gene_chr22_775 TPM= 7.44 Transcript Type= NA
chr22	25922371	25925921	25922371	25925921	+	transcript758.chr22.nnic@NA	transcript758.chr22.nnic	NA	25922371	25925921	Gene ID= novel_gene_chr22_759 TPM= 3.19 Transcript Type= NA
chr22	25956214	25959103	25956214	25959103	-	transcript772.chr22.nnic@NA	transcript772.chr22.nnic	NA	25956214	25959103	Gene ID= novel_gene_chr22_773 TPM= 8.5 Transcript Type= NA
chr22	25959267	25960070	25959267	25960070	-	transcript780.chr22.nnic@NA	transcript780.chr22.nnic	NA	25959267	25960070	Gene ID= novel_gene_chr22_781 TPM= 6.37 Transcript Type= NA
chr22	25977264	25981789	25977264	25981789	+	transcript768.chr22.nnic@NA	transcript768.chr22.nnic	NA	25977264	25981789	Gene ID= novel_gene_chr22_769 TPM= 2.12 Transcript Type= NA
chr22	26000583	26003655	26000583	26003655	-	transcript782.chr22.nnic@NA	transcript782.chr22.nnic	NA	26000583	26003655	Gene ID= novel_gene_chr22_783 TPM= 4.25 Transcript Type= NA
chr22	26028671	26030642	26028671	26030642	+	transcript770.chr22.nnic@NA	transcript770.chr22.nnic	NA	26028671	26030642	Gene ID= novel_gene_chr22_771 TPM= 5.31 Transcript Type= NA
chr22	26060997	26063845	26060997	26063845	+	transcript760.chr22.nnic@NA	transcript760.chr22.nnic	NA	26060997	26063845	Gene ID= novel_gene_chr22_761 TPM= 2.12 Transcript Type= NA
chr22	26429273	26445015	26429273	26445015	+	ENST00000215906.5@ASPHD2	ENST00000215906.5	protein_coding	26429273,26433392,26442459,26443097	26429486,26434501,26442572,26445015	Gene ID= ENSG00000128203.6 TPM= 1.06 Transcript Type= protein_coding
chr22	26452083	26483837	26452083	26483837	-	ENST00000466781.5@HPS4	ENST00000466781.5	protein_coding	26483745,26481722,26479265,26476993,26472832,26472302,26470719,26466226,26465455,26463917,26458445,26457859,26452083	26483837,26482240,26479355,26477136,26472939,26472418,26470813,26468623,26465551,26464826,26458577,26457967,26453404	Gene ID= ENSG00000100099.20 TPM= 3.19 Transcript Type= retained_intron
chr22	26476356	26483835	26476356	26483835	-	transcript793.chr22.nic@HPS4	transcript793.chr22.nic	protein_coding	26483765,26481722,26479265,26476356	26483835,26482240,26479355,26477136	Gene ID= ENSG00000100099.20 TPM= 2.12 Transcript Type= NA
chr22	26452083	26483795	26452083	26483795	-	ENST00000336873.9@HPS4	ENST00000336873.9	protein_coding	26483765,26481722,26479265,26476993,26472832,26472302,26470719,26468551,26466226,26465455,26463917,26458445,26457859,26452083	26483795,26482240,26479355,26477136,26472939,26472418,26470813,26468623,26466262,26465551,26464826,26458577,26457967,26453404	Gene ID= ENSG00000100099.20 TPM= 8.5 Transcript Type= protein_coding
chr22	26483877	26494658	26483877	26494658	+	ENST00000215917.11@SRRD	ENST00000215917.11	protein_coding	26483877,26486023,26488029,26488390,26490044,26491025,26491463	26484099,26486063,26488288,26488488,26490198,26491070,26494658	Gene ID= ENSG00000100104.13 TPM= 18.06 Transcript Type= protein_coding
chr22	26491225	26512505	26491225	26512505	-	ENST00000407690.5@TFIP11	ENST00000407690.5	protein_coding	26512394,26512099,26510617,26510064,26506775,26506303,26503666,26501900,26499104,26498869,26496721,26496073,26494797,26494139,26491225	26512505,26512175,26510702,26510281,26506928,26506459,26503793,26502052,26499631,26498975,26496889,26496316,26494939,26494304,26492368	Gene ID= ENSG00000100109.16 TPM= 28.68 Transcript Type= protein_coding
chr22	26491927	26512490	26491927	26512490	-	transcript800.chr22.nic@TFIP11	transcript800.chr22.nic	protein_coding	26512394,26512099,26510617,26510064,26506303,26503666,26501900,26499104,26498869,26496721,26496073,26494797,26494139,26491927	26512490,26512175,26510702,26510281,26506928,26503793,26502052,26499631,26498975,26496889,26496316,26494939,26494304,26492368	Gene ID= ENSG00000100109.16 TPM= 15.93 Transcript Type= NA
chr22	26512537	26514568	26512537	26514568	+	ENST00000566814.1@Z95115.1	ENST00000566814.1	antisense_RNA	26512537	26514568	Gene ID= ENSG00000261188.1 TPM= 1.06 Transcript Type= antisense_RNA
chr22	26525773	26590152	26525773	26590152	-	transcript809.chr22.nnic@TPST2	transcript809.chr22.nnic	protein_coding	26590053,26544604,26540789,26536288,26532695,26528214,26527606,26525773	26590152,26544675,26541718,26536486,26532745,26528262,26527687,26526267	Gene ID= ENSG00000128294.15 TPM= 4.78 Transcript Type= NA
chr22	26521983	26590163	26521983	26590163	-	ENST00000338754.8@TPST2	ENST00000338754.8	protein_coding	26590053,26544604,26540789,26536288,26532695,26528214,26521983	26590163,26544675,26541718,26536486,26532745,26528262,26526267	Gene ID= ENSG00000128294.15 TPM= 3.72 Transcript Type= protein_coding
chr22	26525746	26590104	26525746	26590104	-	transcript813.chr22.nic@TPST2	transcript813.chr22.nic	protein_coding	26590053,26540789,26536288,26532695,26528214,26525746	26590104,26541718,26536486,26532745,26528262,26526267	Gene ID= ENSG00000128294.15 TPM= 6.37 Transcript Type= NA
chr22	26657520	26676475	26657520	26676475	+	ENST00000620145.4@MIAT	ENST00000620145.4	lincRNA	26657520,26663316,26665531,26667185,26668158	26657654,26663398,26666937,26667310,26676475	Gene ID= ENSG00000225783.6 TPM= 1.06 Transcript Type= lincRNA
chr22	26720587	26722170	26720587	26722170	+	transcript817.chr22.nnic@NA	transcript817.chr22.nnic	NA	26720587	26722170	Gene ID= novel_gene_chr22_818 TPM= 3.19 Transcript Type= NA
chr22	27750410	27750997	27750410	27750997	-	transcript819.chr22.nnic@NA	transcript819.chr22.nnic	NA	27750410	27750997	Gene ID= novel_gene_chr22_820 TPM= 2.12 Transcript Type= NA
chr22	27851670	27919311	27851670	27919311	-	transcript826.chr22.nnic@PITPNB	transcript826.chr22.nnic	protein_coding	27919172,27914317,27910964,27897801,27896552,27894555,27873738,27860131,27858387,27854854,27851670	27919311,27914347,27911109,27897892,27896626,27894638,27873815,27860241,27858509,27854939,27853663	Gene ID= ENSG00000180957.17 TPM= 7.44 Transcript Type= NA
chr22	27851670	27919306	27851670	27919306	-	ENST00000455418.7@PITPNB	ENST00000455418.7	protein_coding	27919172,27914317,27910964,27897801,27896552,27894555,27873738,27860131,27858387,27854854,27851670	27919306,27914347,27911109,27897892,27896634,27894638,27873815,27860241,27858509,27854939,27853663	Gene ID= ENSG00000180957.17 TPM= 8.5 Transcript Type= protein_coding
chr22	27854239	27857092	27854239	27857092	-	transcript830.chr22.nnic@NA	transcript830.chr22.nnic	NA	27854239	27857092	Gene ID= novel_gene_chr22_831 TPM= 2.12 Transcript Type= NA
chr22	27902138	27903483	27902138	27903483	+	transcript828.chr22.nnic@NA	transcript828.chr22.nnic	NA	27902138	27903483	Gene ID= novel_gene_chr22_829 TPM= 5.31 Transcript Type= NA
chr22	27919437	27922570	27919437	27922570	+	ENST00000436996.1@TTC28-AS1	ENST00000436996.1	processed_transcript	27919437,27922018	27919545,27922570	Gene ID= ENSG00000235954.6 TPM= 1.06 Transcript Type= retained_intron
chr22	27981364	27982843	27981364	27982843	-	transcript843.chr22.nnic@NA	transcript843.chr22.nnic	NA	27981364	27982843	Gene ID= novel_gene_chr22_844 TPM= 3.19 Transcript Type= NA
chr22	28687744	28741844	28687744	28741844	-	ENST00000328354.10@CHEK2	ENST00000328354.10	protein_coding	28741769,28734403,28725243,28724977,28719395,28711909,28710006,28703505,28699838,28696901,28695710,28695127,28694032,28689135,28687744	28741844,28734727,28725367,28725124,28719485,28712017,28710059,28703566,28699937,28696987,28695873,28695242,28694117,28689215,28687986	Gene ID= ENSG00000183765.20 TPM= 2.12 Transcript Type= protein_coding
chr22	28742052	28757510	28742052	28757510	+	transcript851.chr22.nnic@HSCB	transcript851.chr22.nnic	protein_coding	28742052,28751241,28757078	28742331,28751288,28757510	Gene ID= ENSG00000100209.9 TPM= 2.12 Transcript Type= NA
chr22	28742031	28757510	28742031	28757510	+	ENST00000216027.7@HSCB	ENST00000216027.7	protein_coding	28742031,28743882,28744615,28745864,28751241,28757078	28742331,28743978,28744704,28746008,28751288,28757510	Gene ID= ENSG00000100209.9 TPM= 5.31 Transcript Type= protein_coding
chr22	28742061	28757213	28742061	28757213	+	ENST00000420442.5@HSCB	ENST00000420442.5	protein_coding	28742061,28743882,28744615,28745864,28751241,28757078	28742331,28743978,28744709,28746008,28751288,28757213	Gene ID= ENSG00000100209.9 TPM= 1.06 Transcript Type= nonsense_mediated_decay
chr22	28772674	28789295	28772674	28789295	+	ENST00000249064.8@CCDC117	ENST00000249064.8	protein_coding	28772674,28773725,28780948,28783508,28786089	28773034,28773778,28781172,28783645,28789295	Gene ID= ENSG00000159873.9 TPM= 20.18 Transcript Type= protein_coding
chr22	28794561	28800593	28794561	28800593	-	transcript852.chr22.nnic@XBP1	transcript852.chr22.nnic	protein_coding	28800298,28799057,28797077,28796047,28795259,28794561	28800593,28799153,28797205,28796192,28795732,28795219	Gene ID= ENSG00000100219.16 TPM= 7.97 Transcript Type= NA
chr22	28794555	28800597	28794555	28800597	-	ENST00000216037.10@XBP1	ENST00000216037.10	protein_coding	28800298,28799057,28797077,28796047,28794555	28800597,28799153,28797205,28796192,28795732	Gene ID= ENSG00000100219.16 TPM= 225.79 Transcript Type= protein_coding
chr22	28794557	28800558	28794557	28800558	-	ENST00000403532.7@XBP1	ENST00000403532.7	protein_coding	28800298,28799042,28797077,28796047,28794557	28800558,28799153,28797205,28796192,28795732	Gene ID= ENSG00000100219.16 TPM= 5.93 Transcript Type= protein_coding
chr22	28794559	28797045	28794559	28797045	-	ENST00000484256.1@XBP1	ENST00000484256.1	protein_coding	28796047,28794559	28797045,28795732	Gene ID= ENSG00000100219.16 TPM= 3.54 Transcript Type= retained_intron
chr22	28798304	28800566	28798304	28800566	-	transcript865.chr22.nnic@NA	transcript865.chr22.nnic	NA	28798304	28800566	Gene ID= novel_gene_chr22_866 TPM= 2.92 Transcript Type= NA
chr22	29072934	29143181	29072934	29143181	+	transcript874.chr22.nic@KREMEN1	transcript874.chr22.nic	protein_coding	29072934,29094258,29098862,29121357,29125263,29137342,29138624,29140282,29141944	29073227,29094420,29098953,29121481,29125416,29137674,29138833,29140366,29143181	Gene ID= ENSG00000183762.12 TPM= 9.56 Transcript Type= NA
chr22	29073078	29146820	29073078	29146820	+	ENST00000400335.8@KREMEN1	ENST00000400335.8	protein_coding	29073078,29094258,29098862,29121357,29125263,29137342,29138624,29140282,29141944	29073227,29094420,29098953,29121481,29125416,29137674,29138782,29140366,29146820	Gene ID= ENSG00000183762.12 TPM= 101.97 Transcript Type= protein_coding
chr22	29259852	29268253	29259852	29268253	-	transcript907.chr22.nic@RHBDD3	transcript907.chr22.nic	protein_coding	29268089,29267426,29265479,29263835,29260702,29260326,29259852	29268253,29267577,29265668,29264218,29260864,29260613,29260237	Gene ID= ENSG00000100263.13 TPM= 2.12 Transcript Type= NA
chr22	29259852	29267998	29259852	29267998	-	transcript909.chr22.nic@RHBDD3	transcript909.chr22.nic	protein_coding	29267748,29267426,29263835,29260702,29260326,29259852	29267998,29267577,29265668,29260864,29260613,29260237	Gene ID= ENSG00000100263.13 TPM= 10.62 Transcript Type= NA
chr22	29259852	29267978	29259852	29267978	-	ENST00000216085.11@RHBDD3	ENST00000216085.11	protein_coding	29267748,29267426,29265479,29263835,29260702,29260326,29259852	29267978,29267577,29265668,29264218,29260864,29260613,29260237	Gene ID= ENSG00000100263.13 TPM= 32.93 Transcript Type= protein_coding
chr22	29268290	29300522	29268290	29300522	+	transcript879.chr22.nic@EWSR1	transcript879.chr22.nic	protein_coding	29268290,29272216,29272380,29273741,29274265,29278030,29282390,29286923,29288606,29291562,29292137,29292488,29296239,29297827,29298733,29299234,29299599,29300122	29268349,29272252,29272431,29273864,29274282,29278216,29282557,29287134,29288786,29291599,29292169,29292606,29296368,29297949,29298895,29299331,29299851,29300522	Gene ID= ENSG00000182944.17 TPM= 11.61 Transcript Type= NA
chr22	29268273	29300336	29268273	29300336	+	ENST00000406548.5@EWSR1	ENST00000406548.5	protein_coding	29268273,29272216,29272380,29273741,29278030,29282390,29286923,29288606,29291565,29292137,29292488,29296239,29297827,29298733,29299234,29299599,29300122	29268349,29272252,29272431,29273864,29278216,29282557,29287134,29288786,29291599,29292169,29292606,29296368,29297949,29298895,29299331,29299851,29300336	Gene ID= ENSG00000182944.17 TPM= 146.24 Transcript Type= protein_coding
chr22	29268326	29300336	29268326	29300336	+	ENST00000332035.10@EWSR1	ENST00000332035.10	protein_coding	29268326,29272216,29272380,29273741,29278030,29286923,29288606,29291562,29292137,29292488,29296239,29297827,29298733,29299234,29299599,29300122	29268349,29272252,29272431,29273864,29278216,29287134,29288786,29291599,29292169,29292606,29296368,29297949,29298895,29299331,29299851,29300336	Gene ID= ENSG00000182944.17 TPM= 14.73 Transcript Type= protein_coding
chr22	29268316	29300343	29268316	29300343	+	ENST00000414183.6@EWSR1	ENST00000414183.6	protein_coding	29268316,29272216,29272380,29273741,29274265,29278030,29282390,29286923,29288606,29291565,29292137,29292488,29296239,29297827,29298733,29299234,29299599,29300122	29268349,29272252,29272431,29273864,29274282,29278216,29282557,29287134,29288786,29291599,29292169,29292606,29296368,29297949,29298895,29299331,29299851,29300343	Gene ID= ENSG00000182944.17 TPM= 10.28 Transcript Type= protein_coding
chr22	29306582	29312785	29306582	29312785	+	ENST00000616432.4@GAS2L1	ENST00000616432.4	protein_coding	29306582,29308087,29310439,29310638,29310827,29311462	29307153,29308738,29310546,29310734,29310998,29312785	Gene ID= ENSG00000185340.15 TPM= 39.3 Transcript Type= protein_coding
chr22	29312931	29315664	29312931	29315664	-	transcript923.chr22.nnic@NA	transcript923.chr22.nnic	NA	29312931	29315664	Gene ID= novel_gene_chr22_924 TPM= 2.12 Transcript Type= NA
chr22	29312933	29315756	29312933	29315756	-	ENST00000216101.6@RASL10A	ENST00000216101.6	protein_coding	29315028,29313863,29312933	29315756,29313987,29313568	Gene ID= ENSG00000100276.9 TPM= 5.31 Transcript Type= protein_coding
chr22	29312933	29315692	29312933	29315692	-	ENST00000401450.3@RASL10A	ENST00000401450.3	protein_coding	29315028,29312933	29315692,29313987	Gene ID= ENSG00000100276.9 TPM= 1.06 Transcript Type= protein_coding
chr22	29327682	29388583	29327682	29388583	-	ENST00000357586.6@AP1B1	ENST00000357586.6	protein_coding	29388424,29367207,29363001,29359824,29358726,29356426,29354650,29351705,29351171,29350035,29349218,29342285,29341501,29340656,29339754,29338990,29334265,29331787,29331449,29330623,29330378,29329712,29327682	29388583,29367270,29363106,29359959,29358971,29356616,29354871,29351825,29351266,29350150,29349383,29342383,29341760,29340857,29339774,29339133,29334410,29331916,29331533,29330709,29330532,29329720,29328895	Gene ID= ENSG00000100280.16 TPM= 4.78 Transcript Type= protein_coding
chr22	29327682	29388583	29327682	29388583	-	ENST00000432560.6@AP1B1	ENST00000432560.6	protein_coding	29388424,29367207,29363001,29359824,29358726,29356426,29354650,29351705,29351171,29350035,29349218,29342285,29341501,29340656,29338990,29334265,29331787,29331449,29330623,29330378,29327682	29388583,29367270,29363106,29359959,29358971,29356616,29354871,29351825,29351266,29350150,29349383,29342383,29341760,29340857,29339133,29334410,29331916,29331533,29330709,29330532,29328895	Gene ID= ENSG00000100280.16 TPM= 6.9 Transcript Type= protein_coding
chr22	29327865	29341775	29327865	29341775	-	transcript930.chr22.nic@AP1B1	transcript930.chr22.nic	protein_coding	29340656,29338990,29334265,29331787,29331449,29330623,29330378,29327865	29341775,29339133,29334410,29331916,29331533,29330709,29330532,29328895	Gene ID= ENSG00000100280.16 TPM= 2.12 Transcript Type= NA
chr22	29502196	29504684	29502196	29504684	+	transcript942.chr22.nnic@NA	transcript942.chr22.nnic	NA	29502196	29504684	Gene ID= novel_gene_chr22_943 TPM= 24.43 Transcript Type= NA
chr22	29508329	29553761	29508329	29553761	-	transcript931.chr22.nic@THOC5	transcript931.chr22.nic	protein_coding	29553671,29550728,29549052,29544460,29543429,29542859,29539330,29536624,29531831,29531078,29529162,29528426,29528078,29525838,29520998,29520008,29519006,29517263,29517029,29512021,29511106,29508329	29553761,29550843,29549158,29544603,29543542,29542956,29539476,29536738,29531963,29531110,29529239,29528466,29528177,29525946,29521099,29520104,29519120,29517366,29517116,29512136,29511296,29508520	Gene ID= ENSG00000100296.13 TPM= 2.12 Transcript Type= NA
chr22	29508168	29553793	29508168	29553793	-	transcript933.chr22.nic@THOC5	transcript933.chr22.nic	protein_coding	29553671,29549052,29544460,29543429,29542859,29539330,29536624,29531831,29531078,29529162,29528426,29528078,29525838,29520998,29520008,29519006,29517263,29517029,29512021,29511106,29508168	29553793,29549158,29544603,29543542,29542956,29539476,29536738,29531963,29531110,29529239,29528466,29528177,29525946,29521099,29520104,29519120,29517366,29517116,29512136,29511296,29508520	Gene ID= ENSG00000100296.13 TPM= 10.09 Transcript Type= NA
chr22	29508329	29553665	29508329	29553665	-	transcript936.chr22.nic@THOC5	transcript936.chr22.nic	protein_coding	29553448,29549052,29544460,29543429,29542859,29539330,29536624,29531831,29531078,29529162,29528426,29528078,29525838,29520998,29520008,29519006,29517263,29517029,29512021,29511106,29508329	29553665,29549158,29544603,29543542,29542956,29539476,29536738,29531963,29531110,29529239,29528466,29528177,29525946,29521099,29520104,29519120,29517366,29517116,29512136,29511296,29508520	Gene ID= ENSG00000100296.13 TPM= 2.12 Transcript Type= NA
chr22	29536276	29541525	29536276	29541525	-	transcript941.chr22.nic@THOC5	transcript941.chr22.nic	protein_coding	29539330,29536276	29541525,29536738	Gene ID= ENSG00000100296.13 TPM= 2.12 Transcript Type= NA
chr22	29554808	29581337	29554808	29581337	-	ENST00000216121.11@NIPSNAP1	ENST00000216121.11	protein_coding	29580985,29570405,29570162,29569193,29561792,29561506,29561171,29560734,29558870,29554808	29581337,29570532,29570207,29569287,29561862,29561646,29561202,29560828,29558953,29555999	Gene ID= ENSG00000184117.11 TPM= 43.55 Transcript Type= protein_coding
chr22	29730956	29766979	29730956	29766979	-	transcript951.chr22.nnic@ZMAT5	transcript951.chr22.nnic	protein_coding	29766872,29754749,29748418,29742418,29740650,29738330,29730956	29766979,29754863,29748571,29742480,29740730,29738441,29731354	Gene ID= ENSG00000100319.12 TPM= 2.12 Transcript Type= NA
chr22	29730956	29766995	29730956	29766995	-	transcript952.chr22.nnic@ZMAT5	transcript952.chr22.nnic	protein_coding	29766949,29754749,29748418,29742418,29740650,29738330,29730956	29766995,29754863,29748571,29742480,29740730,29738441,29731354	Gene ID= ENSG00000100319.12 TPM= 4.25 Transcript Type= NA
chr22	29730956	29767054	29730956	29767054	-	transcript955.chr22.nic@ZMAT5	transcript955.chr22.nic	protein_coding	29766949,29748418,29742418,29740650,29738330,29730956	29767054,29748571,29742480,29740730,29738441,29731354	Gene ID= ENSG00000100319.12 TPM= 14.87 Transcript Type= NA
chr22	29730956	29766961	29730956	29766961	-	ENST00000344318.3@ZMAT5	ENST00000344318.3	protein_coding	29766872,29748418,29742418,29740650,29738330,29730956	29766961,29748571,29742480,29740730,29738441,29731354	Gene ID= ENSG00000100319.12 TPM= 13.81 Transcript Type= protein_coding
chr22	29767369	29770413	29767369	29770413	+	ENST00000330029.6@UQCR10	ENST00000330029.6	protein_coding	29767369,29769678	29767548,29770413	Gene ID= ENSG00000184076.13 TPM= 69.04 Transcript Type= protein_coding
chr22	29767375	29769944	29767375	29769944	+	transcript989.chr22.nnic@NA	transcript989.chr22.nnic	NA	29767375	29769944	Gene ID= novel_gene_chr22_990 TPM= 20.18 Transcript Type= NA
chr22	29788611	29838273	29788611	29838273	-	transcript961.chr22.nic@ASCC2	transcript961.chr22.nic	protein_coding	29838178,29834489,29833541,29832245,29825622,29825087,29822335,29816006,29814657,29813430,29808111,29806797,29806485,29806216,29804638,29801994,29800991,29793577,29793360,29792433,29790469,29788611	29838273,29834550,29833614,29832342,29825780,29825257,29822464,29816073,29814767,29813542,29808185,29806904,29806553,29806290,29804830,29802208,29801110,29793676,29793490,29792535,29790548,29789184	Gene ID= ENSG00000100325.14 TPM= 9.82 Transcript Type= NA
chr22	29788611	29838269	29788611	29838269	-	transcript972.chr22.nnic@ASCC2	transcript972.chr22.nnic	protein_coding	29838178,29825622,29825087,29822335,29816006,29814657,29813430,29808111,29806797,29806485,29806216,29804638,29801994,29800991,29793577,29793360,29792433,29790469,29788611	29838269,29825780,29825257,29822464,29816073,29814767,29813542,29808185,29806904,29806553,29806290,29804830,29802208,29801110,29793676,29793490,29792535,29790548,29789184	Gene ID= ENSG00000100325.14 TPM= 6.64 Transcript Type= NA
chr22	29788611	29838281	29788611	29838281	-	transcript973.chr22.nic@ASCC2	transcript973.chr22.nic	protein_coding	29838178,29832245,29825087,29822335,29816006,29814657,29813430,29808111,29806797,29806485,29806216,29804638,29801994,29800991,29793577,29793360,29792433,29790469,29788611	29838281,29832342,29825257,29822464,29816073,29814767,29813542,29808185,29806904,29806553,29806290,29804830,29802208,29801110,29793676,29793490,29792535,29790548,29789184	Gene ID= ENSG00000100325.14 TPM= 18.06 Transcript Type= NA
chr22	29822142	29838281	29822142	29838281	-	transcript979.chr22.nic@ASCC2	transcript979.chr22.nic	protein_coding	29838178,29832245,29825622,29825087,29822142	29838281,29832342,29825780,29825257,29822464	Gene ID= ENSG00000100325.14 TPM= 2.12 Transcript Type= NA
chr22	29788608	29838274	29788608	29838274	-	ENST00000307790.7@ASCC2	ENST00000307790.7	protein_coding	29838178,29832245,29825622,29825087,29822335,29816006,29814657,29813430,29808111,29806797,29806485,29806216,29804638,29801994,29800991,29793577,29793360,29792433,29790469,29788608	29838274,29832342,29825780,29825257,29822464,29816073,29814767,29813542,29808185,29806904,29806553,29806290,29804830,29802208,29801110,29793676,29793490,29792535,29790548,29789184	Gene ID= ENSG00000100325.14 TPM= 47 Transcript Type= protein_coding
chr22	29788642	29838276	29788642	29838276	-	ENST00000397771.6@ASCC2	ENST00000397771.6	protein_coding	29838178,29834489,29832245,29825622,29825087,29822335,29816006,29814657,29813430,29808111,29806797,29806485,29806216,29804638,29801994,29800991,29793577,29793360,29792433,29790469,29788642	29838276,29834550,29832342,29825780,29825257,29822464,29816073,29814767,29813542,29808185,29806904,29806553,29806290,29804830,29802208,29801110,29793676,29793490,29792535,29790548,29789184	Gene ID= ENSG00000100325.14 TPM= 1.33 Transcript Type= protein_coding
chr22	29883161	30026037	29883161	30026037	+	transcript992.chr22.nic@MTMR3	transcript992.chr22.nic	protein_coding	29883161,29957036,29970976,29978442,29978936,29988480,29991504,29998761,30002880,30007114,30007901,30009018,30012368,30013356,30016528,30017927,30019480,30022029,30022609,30023457,30025630	29883359,29957088,29971062,29978531,29979052,29988562,29991670,29998857,30002993,30007319,30008032,30009129,30012563,30013541,30016698,30018072,30020884,30022139,30022697,30023483,30026037	Gene ID= ENSG00000100330.15 TPM= 9.56 Transcript Type= NA
chr22	29898914	29902164	29898914	29902164	-	transcript1000.chr22.nnic@NA	transcript1000.chr22.nnic	NA	29898914	29902164	Gene ID= novel_gene_chr22_1001 TPM= 3.19 Transcript Type= NA
chr22	29976122	29977971	29976122	29977971	-	transcript1004.chr22.nnic@NA	transcript1004.chr22.nnic	NA	29976122	29977971	Gene ID= novel_gene_chr22_1005 TPM= 2.12 Transcript Type= NA
chr22	30026050	30027710	30026050	30027710	-	transcript1002.chr22.nnic@NA	transcript1002.chr22.nnic	NA	30026050	30027710	Gene ID= novel_gene_chr22_1003 TPM= 4.25 Transcript Type= NA
chr22	30285117	30289627	30285117	30289627	-	ENST00000407689.7@CASTOR1	ENST00000407689.7	protein_coding	30289385,30288706,30287373,30287155,30286825,30286263,30286016,30285832,30285117	30289627,30288776,30287560,30287287,30286948,30286376,30286098,30285926,30285688	Gene ID= ENSG00000239282.7 TPM= 10.62 Transcript Type= protein_coding
chr22	30291990	30327046	30291990	30327046	-	ENST00000215790.11@TBC1D10A	ENST00000215790.11	protein_coding	30326673,30304531,30299444,30295737,30294941,30294796,30293921,30293651,30291990	30327046,30304630,30299551,30295843,30295055,30294861,30294110,30293805,30292851	Gene ID= ENSG00000099992.15 TPM= 8.5 Transcript Type= protein_coding
chr22	30331988	30356947	30331988	30356947	-	ENST00000215793.12@SF3A1	ENST00000215793.12	protein_coding	30356730,30352951,30346312,30344933,30342805,30342200,30341692,30340695,30340196,30339130,30338789,30337690,30337026,30335652,30335467,30331988	30356947,30353072,30346519,30345190,30342879,30342350,30341885,30340812,30340381,30339251,30339034,30337897,30337180,30335753,30335538,30334695	Gene ID= ENSG00000099995.18 TPM= 23.37 Transcript Type= protein_coding
chr22	30375609	30378903	30375609	30378903	-	transcript1021.chr22.nnic@RNF215	transcript1021.chr22.nnic	protein_coding	30378492,30377511,30375609	30378903,30378357,30376020	Gene ID= ENSG00000099999.14 TPM= 3.19 Transcript Type= NA
chr22	30378817	30387388	30378817	30387388	-	ENST00000382363.7@RNF215	ENST00000382363.7	protein_coding	30387029,30386616,30386070,30385904,30384339,30380282,30380062,30379711,30378817	30387388,30386759,30386141,30385989,30384495,30380401,30380205,30379813,30379622	Gene ID= ENSG00000099999.14 TPM= 14.87 Transcript Type= protein_coding
chr22	30396857	30425317	30396857	30425317	+	ENST00000615189.4@SEC14L2	ENST00000615189.4	protein_coding	30396857,30399643,30406342,30407095,30407415,30409187,30409426,30410596,30415759,30415948,30416234,30422277	30397170,30399718,30406385,30407154,30407603,30409282,30409486,30410679,30415865,30416087,30416403,30425317	Gene ID= ENSG00000100003.17 TPM= 1.06 Transcript Type= protein_coding
chr22	30425530	30429053	30425530	30429053	+	ENST00000266263.9@MTFP1	ENST00000266263.9	protein_coding	30425530,30426717,30427171,30428462	30425946,30426844,30427403,30429053	Gene ID= ENSG00000242114.5 TPM= 22.31 Transcript Type= protein_coding
chr22	30576625	30591940	30576625	30591940	-	ENST00000354694.11@PES1	ENST00000354694.11	protein_coding	30591810,30589191,30588021,30587286,30584546,30584365,30581528,30581334,30581012,30580571,30580053,30579751,30579137,30578837,30576625	30591940,30589270,30588174,30587395,30584717,30584454,30581644,30581408,30581101,30580701,30580178,30579935,30579303,30578998,30577129	Gene ID= ENSG00000100029.17 TPM= 38.24 Transcript Type= protein_coding
chr22	30576665	30591880	30576665	30591880	-	ENST00000402284.7@PES1	ENST00000402284.7	protein_coding	30591810,30589191,30588021,30587286,30584546,30584416,30581528,30581334,30581012,30580571,30580053,30579751,30579137,30578837,30576665	30591880,30589270,30588174,30587395,30584717,30584454,30581644,30581408,30581101,30580701,30580178,30579935,30579303,30578998,30577129	Gene ID= ENSG00000100029.17 TPM= 1.06 Transcript Type= protein_coding
chr22	30606838	30627278	30606838	30627278	+	ENST00000215838.7@TCN2	ENST00000215838.7	protein_coding	30606838,30610871,30612873,30614349,30615301,30615601,30617330,30622968,30626460	30607395,30611063,30613042,30614501,30615473,30615787,30617495,30623083,30627278	Gene ID= ENSG00000185339.8 TPM= 4.25 Transcript Type= protein_coding
chr22	30635652	30647893	30635652	30647893	+	ENST00000343605.4@SLC35E4	ENST00000343605.4	protein_coding	30635652,30646598	30637069,30647893	Gene ID= ENSG00000100036.12 TPM= 15.93 Transcript Type= protein_coding
chr22	30662031	30667890	30662031	30667890	-	ENST00000334679.3@DUSP18	ENST00000334679.3	protein_coding	30667462,30662031	30667890,30664080	Gene ID= ENSG00000167065.13 TPM= 2.12 Transcript Type= protein_coding
chr22	30694806	30907824	30694806	30907824	+	ENST00000332585.10@OSBP2	ENST00000332585.10	protein_coding	30694806,30741161,30870429,30887426,30888223,30889177,30889490,30890728,30893122,30893463,30893638,30893817,30905837,30906197	30695553,30741369,30870682,30887618,30888340,30889234,30889636,30890973,30893242,30893566,30893733,30894001,30906069,30907824	Gene ID= ENSG00000184792.15 TPM= 5.31 Transcript Type= protein_coding
chr22	30881681	30907623	30881681	30907623	+	ENST00000431368.5@OSBP2	ENST00000431368.5	protein_coding	30881681,30887426,30888223,30889177,30889490,30890728,30893122,30893463,30893638,30893817,30905837,30906197	30881802,30887618,30888340,30889234,30889636,30890973,30893242,30893566,30893733,30894001,30906069,30907623	Gene ID= ENSG00000184792.15 TPM= 1.06 Transcript Type= protein_coding
chr22	30881681	30907824	30881681	30907824	+	ENST00000535268.5@OSBP2	ENST00000535268.5	protein_coding	30881681,30887426,30888223,30889180,30889490,30890728,30893122,30893463,30893638,30893817,30905837,30906197	30881802,30887618,30888340,30889234,30889636,30890973,30893242,30893566,30893733,30894001,30906069,30907824	Gene ID= ENSG00000184792.15 TPM= 5.31 Transcript Type= protein_coding
chr22	30972263	30976063	30972263	30976063	+	ENST00000602393.1@TUG1	ENST00000602393.1	antisense_RNA	30972263,30975170	30973601,30976063	Gene ID= ENSG00000253352.8 TPM= 6.9 Transcript Type= antisense_RNA
chr22	30972901	30976081	30972901	30976081	+	ENST00000602971.1@TUG1	ENST00000602971.1	antisense_RNA	30972901,30975170	30973587,30976081	Gene ID= ENSG00000253352.8 TPM= 3.72 Transcript Type= antisense_RNA
chr22	30972467	30976039	30972467	30976039	+	transcript1055.chr22.nnic@NA	transcript1055.chr22.nnic	NA	30972467	30976039	Gene ID= novel_gene_chr22_1056 TPM= 4.25 Transcript Type= NA
chr22	30976370	30978847	30976370	30978847	+	transcript1057.chr22.nnic@NA	transcript1057.chr22.nnic	NA	30976370	30978847	Gene ID= novel_gene_chr22_1058 TPM= 4.25 Transcript Type= NA
chr22	31093272	31104624	31093272	31104624	+	transcript1078.chr22.nic@SMTN	transcript1078.chr22.nic	protein_coding	31093272,31095303,31095534,31097269,31098667,31099062,31099745,31104316	31093876,31095455,31095609,31097338,31098840,31099179,31099896,31104624	Gene ID= ENSG00000183963.18 TPM= 10.28 Transcript Type= NA
chr22	31093272	31104624	31093272	31104624	+	transcript1080.chr22.nnic@SMTN	transcript1080.chr22.nnic	protein_coding	31093272,31095303,31095534,31097269,31098667,31099745,31100885,31104316	31093876,31095455,31095609,31097338,31098840,31099896,31101049,31104624	Gene ID= ENSG00000183963.18 TPM= 12.19 Transcript Type= NA
chr22	31081319	31104624	31081319	31104624	+	ENST00000333137.11@SMTN	ENST00000333137.11	protein_coding	31081319,31083179,31087965,31088513,31088699,31088872,31089699,31090108,31090808,31090961,31091675,31095303,31095534,31096733,31096998,31097269,31098667,31099062,31099745,31100885,31104316	31081456,31083309,31088113,31088606,31088777,31088969,31090019,31090180,31090879,31091482,31091847,31095455,31095609,31096897,31097060,31097338,31098840,31099179,31099896,31101049,31104624	Gene ID= ENSG00000183963.18 TPM= 21.48 Transcript Type= protein_coding
chr22	31081319	31104624	31081319	31104624	+	ENST00000347557.6@SMTN	ENST00000347557.6	protein_coding	31081319,31083179,31087965,31088513,31088699,31088872,31089699,31090108,31090808,31090961,31091675,31095303,31095534,31096733,31096998,31097269,31098667,31099062,31099745,31104316	31081456,31083309,31088113,31088606,31088777,31088969,31090019,31090180,31090879,31091482,31091847,31095455,31095609,31096897,31097060,31097338,31098840,31099179,31099896,31104624	Gene ID= ENSG00000183963.18 TPM= 9.56 Transcript Type= protein_coding
chr22	31093358	31104623	31093358	31104623	+	ENST00000404574.5@SMTN	ENST00000404574.5	protein_coding	31093358,31095303,31095534,31097269,31098667,31099062,31099745,31100885,31104316	31093876,31095455,31095609,31097338,31098840,31099179,31099896,31101049,31104623	Gene ID= ENSG00000183963.18 TPM= 158.37 Transcript Type= protein_coding
chr22	31093368	31104623	31093368	31104623	+	ENST00000493335.5@SMTN	ENST00000493335.5	protein_coding	31093368,31093784,31095303,31095534,31095852,31096998,31098667,31099062,31099745,31100885,31104316	31093678,31093876,31095455,31095609,31096897,31097338,31098840,31099179,31099896,31101049,31104623	Gene ID= ENSG00000183963.18 TPM= 18.77 Transcript Type= retained_intron
chr22	31102254	31104623	31102254	31104623	+	transcript1082.chr22.nnic@NA	transcript1082.chr22.nnic	NA	31102254	31104623	Gene ID= novel_gene_chr22_1083 TPM= 3.64 Transcript Type= NA
chr22	31104777	31120379	31104777	31120379	-	transcript1090.chr22.nnic@SELENOM	transcript1090.chr22.nnic	protein_coding	31119883,31108071,31107684,31107377,31105930,31105658,31105208,31104777	31120379,31108103,31107886,31107444,31105965,31105692,31105286,31105128	Gene ID= ENSG00000198832.10 TPM= 2.66 Transcript Type= NA
chr22	31104777	31107568	31104777	31107568	-	ENST00000400299.6@SELENOM	ENST00000400299.6	protein_coding	31107377,31105930,31105658,31105208,31104777	31107568,31105965,31105692,31105286,31105128	Gene ID= ENSG00000198832.10 TPM= 64.26 Transcript Type= protein_coding
chr22	31122923	31134696	31122923	31134696	+	ENST00000412277.6@INPP5J	ENST00000412277.6	protein_coding	31122923,31124142,31124845,31126376,31126613,31126921,31127357,31127951,31128214,31128471,31133098,31133406,31133610,31133913	31123119,31124263,31126010,31126489,31126721,31127037,31127532,31128062,31128323,31128654,31133235,31133483,31133714,31134696	Gene ID= ENSG00000185133.13 TPM= 20.71 Transcript Type= protein_coding
chr22	31122994	31134696	31122994	31134696	+	ENST00000404390.7@INPP5J	ENST00000404390.7	protein_coding	31122994,31124845,31126376,31126613,31126921,31127357,31127951,31128214,31128471,31133098,31133406,31133610,31133913	31123119,31124906,31126489,31126721,31127037,31127532,31128062,31128323,31128654,31133235,31133483,31133714,31134696	Gene ID= ENSG00000185133.13 TPM= 5.84 Transcript Type= protein_coding
chr22	31122994	31134696	31122994	31134696	+	ENST00000400294.6@INPP5J	ENST00000400294.6	protein_coding	31122994,31124845,31125833,31126376,31126613,31126921,31127357,31127951,31128214,31128471,31133098,31133406,31133610,31133913	31123119,31124906,31126010,31126489,31126721,31127037,31127532,31128062,31128323,31128654,31133235,31133483,31133714,31134696	Gene ID= ENSG00000185133.13 TPM= 4.25 Transcript Type= protein_coding
chr22	31160186	31207012	31160186	31207012	+	transcript1100.chr22.nnic@RNF185	transcript1100.chr22.nnic	protein_coding	31160186,31176262,31187047,31192684,31195469,31196936,31201498,31204489	31160303,31176417,31187270,31192702,31195581,31196990,31201615,31207012	Gene ID= ENSG00000138942.15 TPM= 5.52 Transcript Type= NA
chr22	31160191	31207012	31160191	31207012	+	transcript1101.chr22.nic@RNF185	transcript1101.chr22.nic	protein_coding	31160191,31182969,31187047,31192684,31195469,31196936,31201498,31204489	31160303,31183066,31187270,31192702,31195581,31196990,31201615,31207012	Gene ID= ENSG00000138942.15 TPM= 4.46 Transcript Type= NA
chr22	31160179	31207012	31160179	31207012	+	transcript1105.chr22.nic@RNF185	transcript1105.chr22.nic	protein_coding	31160179,31192684,31195469,31196936,31201498,31204489	31160303,31192702,31195581,31196990,31201615,31207012	Gene ID= ENSG00000138942.15 TPM= 6.59 Transcript Type= NA
chr22	31160193	31207019	31160193	31207019	+	ENST00000326132.10@RNF185	ENST00000326132.10	protein_coding	31160193,31187047,31192684,31195469,31196936,31201498,31204489	31160303,31187270,31192702,31195581,31196990,31201615,31207019	Gene ID= ENSG00000138942.15 TPM= 35.26 Transcript Type= protein_coding
chr22	31160211	31207013	31160211	31207013	+	ENST00000426256.6@RNF185	ENST00000426256.6	protein_coding	31160211,31187047,31192684,31195469,31196936,31201498,31204489	31160303,31187270,31192702,31195581,31197158,31201615,31207013	Gene ID= ENSG00000138942.15 TPM= 2.34 Transcript Type= protein_coding
chr22	31212295	31280080	31212295	31280080	+	ENST00000331728.8@LIMK2	ENST00000331728.8	protein_coding	31212295,31225720,31258291,31259121,31259889,31262134,31262595,31265946,31266984,31267776,31268144,31271136,31272530,31273452,31275151,31278297	31212424,31225819,31258426,31259230,31260077,31262239,31262791,31266132,31267070,31267907,31268200,31271201,31272704,31273507,31275308,31280080	Gene ID= ENSG00000182541.17 TPM= 3.19 Transcript Type= protein_coding
chr22	31281593	31292528	31281593	31292528	-	ENST00000215912.9@PIK3IP1	ENST00000215912.9	protein_coding	31292275,31291180,31290965,31289499,31289315,31281593	31292528,31291296,31291084,31289699,31289393,31283288	Gene ID= ENSG00000100100.12 TPM= 13.81 Transcript Type= protein_coding
chr22	31325809	31346232	31325809	31346232	-	ENST00000351933.8@PATZ1	ENST00000351933.8	protein_coding	31344332,31342897,31335692,31325809	31346232,31342960,31335863,31327309	Gene ID= ENSG00000100105.17 TPM= 8.5 Transcript Type= protein_coding
chr22	31346777	31348719	31346777	31348719	+	ENST00000504184.3@LINC01521	ENST00000504184.3	lincRNA	31346777	31348719	Gene ID= ENSG00000213888.3 TPM= 2.12 Transcript Type= lincRNA
chr22	31454058	31489853	31454058	31489853	-	transcript1130.chr22.nic@EIF4ENIF1	transcript1130.chr22.nic	protein_coding	31489694,31488623,31471844,31468175,31463681,31462932,31458475,31455852,31455136,31454058	31489853,31488745,31471917,31468302,31463967,31463133,31458650,31455987,31455315,31454376	Gene ID= ENSG00000184708.17 TPM= 6.37 Transcript Type= NA
chr22	31453377	31489853	31453377	31489853	-	transcript1132.chr22.nic@EIF4ENIF1	transcript1132.chr22.nic	protein_coding	31489694,31488623,31471844,31468175,31463681,31462932,31458475,31455852,31453377	31489853,31488745,31471917,31468302,31463967,31463133,31458650,31455987,31455315	Gene ID= ENSG00000184708.17 TPM= 2.12 Transcript Type= NA
chr22	31496538	31618548	31496538	31618548	+	ENST00000400289.5@SFI1	ENST00000400289.5	protein_coding	31496538,31508259,31546861,31550254,31556942,31561290,31573058,31575231,31578382,31580272,31583875,31585068,31589447,31602212,31602607,31603744,31604309,31604869,31606328,31607937,31611143,31611766,31613142,31613354,31613602,31614789,31615048,31616745,31617000,31618115,31618314	31496637,31508376,31546971,31550348,31557059,31561392,31573214,31575392,31578452,31580364,31583972,31585134,31589577,31602293,31602785,31603819,31604404,31604945,31606430,31608033,31611303,31611840,31613216,31613530,31613855,31614860,31615279,31616877,31617078,31618226,31618548	Gene ID= ENSG00000198089.15 TPM= 2.12 Transcript Type= protein_coding
chr22	31618491	31630856	31618491	31630856	-	transcript1144.chr22.nic@PISD	transcript1144.chr22.nic	protein_coding	31630804,31625763,31623684,31621649,31621334,31620996,31620553,31618491	31630856,31626016,31623849,31621885,31621472,31621142,31620713,31619836	Gene ID= ENSG00000241878.11 TPM= 21.24 Transcript Type= NA
chr22	31753909	31784258	31753909	31784258	+	transcript1152.chr22.nic@DEPDC5	transcript1152.chr22.nic	protein_coding	31753909,31754862,31758546,31760656,31764975,31766585,31768814,31778099,31783907	31753996,31754979,31758633,31760702,31765060,31766668,31768863,31778168,31784258	Gene ID= ENSG00000100150.16 TPM= 2.12 Transcript Type= NA
chr22	31944461	31957603	31944461	31957603	+	ENST00000248975.5@YWHAH	ENST00000248975.5	protein_coding	31944461,31956139	31944820,31957603	Gene ID= ENSG00000128245.14 TPM= 178.44 Transcript Type= protein_coding
chr22	31944966	31957603	31944966	31957603	+	ENST00000471374.1@YWHAH	ENST00000471374.1	protein_coding	31944966,31956139	31945235,31957603	Gene ID= ENSG00000128245.14 TPM= 5.31 Transcript Type= processed_transcript
chr22	32387582	32412255	32387582	32412255	-	ENST00000216038.5@RTCB	ENST00000216038.5	protein_coding	32412064,32408755,32408175,32406662,32401747,32399603,32397941,32396074,32395026,32393892,32392240,32387582	32412255,32408833,32408242,32406761,32401903,32399759,32398100,32396249,32395214,32394002,32392359,32388099	Gene ID= ENSG00000100220.11 TPM= 205 Transcript Type= protein_coding
chr22	32475257	32498829	32475257	32498829	+	ENST00000397426.5@FBXO7	ENST00000397426.5	protein_coding	32475257,32478981,32483897,32485068,32487745,32491086,32493105,32495493,32498144	32475398,32479275,32484124,32485209,32487828,32491181,32493281,32495530,32498829	Gene ID= ENSG00000100225.17 TPM= 19.38 Transcript Type= protein_coding
chr22	32474676	32498829	32474676	32498829	+	ENST00000420700.5@FBXO7	ENST00000420700.5	protein_coding	32474676,32483897,32485068,32487745,32491086,32493105,32495493,32498144	32475124,32484124,32485209,32487828,32491181,32493281,32495530,32498829	Gene ID= ENSG00000100225.17 TPM= 14.6 Transcript Type= nonsense_mediated_decay
chr22	32475281	32498829	32475281	32498829	+	transcript1182.chr22.nnic@FBXO7	transcript1182.chr22.nnic	protein_coding	32475281,32483897,32485068,32487745,32491086,32493105,32495493,32498144	32475398,32484124,32485209,32487828,32491181,32493281,32495530,32498829	Gene ID= ENSG00000100225.17 TPM= 5.05 Transcript Type= NA
chr22	32474676	32498829	32474676	32498829	+	ENST00000266087.11@FBXO7	ENST00000266087.11	protein_coding	32474676,32478981,32483897,32485068,32487745,32491086,32493105,32495493,32498144	32475124,32479275,32484124,32485209,32487828,32491181,32493281,32495530,32498829	Gene ID= ENSG00000100225.17 TPM= 69.31 Transcript Type= protein_coding
chr22	32801701	32863043	32801701	32863043	+	ENST00000266085.6@TIMP3	ENST00000266085.6	protein_coding	32801701,32849452,32857249,32858017,32859180	32802122,32849534,32857360,32858138,32863043	Gene ID= ENSG00000100234.11 TPM= 154.01 Transcript Type= protein_coding
chr22	32832543	32837851	32832543	32837851	-	transcript1192.chr22.nnic@NA	transcript1192.chr22.nnic	NA	32832543	32837851	Gene ID= novel_gene_chr22_1193 TPM= 3.19 Transcript Type= NA
chr22	33273089	33921042	33273089	33921042	-	transcript1200.chr22.nnic@LARGE1	transcript1200.chr22.nnic	protein_coding	33920646,33919995,33761371,33650367,33626244,33604435,33564848,33432161,33384192,33381919,33337646,33316085,33304229,33283202,33277060,33273089	33921042,33920599,33761558,33650668,33626326,33604558,33565019,33432265,33384304,33382044,33337801,33316248,33304507,33283348,33277255,33274624	Gene ID= ENSG00000133424.20 TPM= 17.44 Transcript Type= NA
chr22	33273076	33920428	33273076	33920428	-	ENST00000397394.6@LARGE1	ENST00000397394.6	protein_coding	33919995,33761371,33650367,33626244,33604435,33564848,33432161,33384192,33381919,33337646,33316085,33304229,33283202,33277060,33273076	33920428,33761558,33650668,33626326,33604558,33565019,33432265,33384304,33382044,33337801,33316248,33304507,33283348,33277255,33274624	Gene ID= ENSG00000133424.20 TPM= 58.15 Transcript Type= protein_coding
chr22	33447296	33449379	33447296	33449379	-	transcript1220.chr22.nnic@NA	transcript1220.chr22.nnic	NA	33447296	33449379	Gene ID= novel_gene_chr22_1221 TPM= 2.12 Transcript Type= NA
chr22	33647952	33651240	33647952	33651240	+	transcript1216.chr22.nnic@NA	transcript1216.chr22.nnic	NA	33647952	33651240	Gene ID= novel_gene_chr22_1217 TPM= 4.25 Transcript Type= NA
chr22	33878986	33882434	33878986	33882434	-	transcript1218.chr22.nnic@NA	transcript1218.chr22.nnic	NA	33878986	33882434	Gene ID= novel_gene_chr22_1219 TPM= 4.25 Transcript Type= NA
chr22	35257487	35295807	35257487	35295807	+	ENST00000418170.5@HMGXB4	ENST00000418170.5	protein_coding	35257487,35262323,35263078,35263796,35263982,35264648,35283962,35285997,35287347,35288238,35292992,35293607	35257557,35262421,35263226,35263874,35264096,35265603,35284043,35286061,35287452,35288407,35293114,35295807	Gene ID= ENSG00000100281.13 TPM= 3.72 Transcript Type= nonsense_mediated_decay
chr22	35257452	35265570	35257452	35265570	+	ENST00000420166.5@HMGXB4	ENST00000420166.5	protein_coding	35257452,35263078,35263796,35264648	35257557,35263226,35263874,35265570	Gene ID= ENSG00000100281.13 TPM= 2.12 Transcript Type= protein_coding
chr22	35257498	35295764	35257498	35295764	+	ENST00000216106.5@HMGXB4	ENST00000216106.5	protein_coding	35257498,35262323,35263078,35263796,35264648,35283962,35285997,35287347,35288238,35292992,35293607	35257557,35262421,35263226,35263874,35265603,35284043,35286061,35287452,35288407,35293114,35295764	Gene ID= ENSG00000100281.13 TPM= 2.66 Transcript Type= protein_coding
chr22	35257496	35265567	35257496	35265567	+	ENST00000455359.5@HMGXB4	ENST00000455359.5	protein_coding	35257496,35263078,35263796,35263982,35264648	35257557,35263226,35263874,35264096,35265567	Gene ID= ENSG00000100281.13 TPM= 1.06 Transcript Type= protein_coding
chr22	35279679	35282797	35279679	35282797	-	transcript1228.chr22.nnic@NA	transcript1228.chr22.nnic	NA	35279679	35282797	Gene ID= novel_gene_chr22_1229 TPM= 3.19 Transcript Type= NA
chr22	35299804	35347994	35299804	35347994	+	ENST00000449058.6@TOM1	ENST00000449058.6	protein_coding	35299804,35317877,35321959,35323028,35323496,35323768,35327271,35330347,35332981,35333404,35334328,35338713,35345725,35346930,35347055	35299980,35317961,35322037,35323177,35323630,35323914,35327387,35330480,35333014,35333497,35334448,35338788,35345784,35346969,35347994	Gene ID= ENSG00000100284.20 TPM= 112.59 Transcript Type= protein_coding
chr22	35299881	35347973	35299881	35347973	+	transcript1235.chr22.nnic@TOM1	transcript1235.chr22.nnic	protein_coding	35299881,35317877,35323028,35323496,35323768,35327271,35330347,35332981,35333404,35334328,35338713,35345725,35346930,35347055	35299980,35317961,35323177,35323630,35323914,35327387,35330480,35333014,35333497,35334448,35338788,35345784,35346969,35347973	Gene ID= ENSG00000100284.20 TPM= 9.03 Transcript Type= NA
chr22	35400063	35425430	35400063	35425430	+	ENST00000216122.8@MCM5	ENST00000216122.8	protein_coding	35400063,35400431,35403207,35403414,35406553,35408408,35410744,35412510,35413875,35415829,35416339,35416638,35417744,35419884,35421318,35423214,35424154	35400208,35400605,35403333,35403542,35406725,35408563,35410910,35412681,35413986,35415972,35416404,35416814,35417856,35420012,35421460,35423341,35425430	Gene ID= ENSG00000100297.15 TPM= 18.06 Transcript Type= protein_coding
chr22	35551132	35553864	35551132	35553864	-	transcript1243.chr22.nnic@NA	transcript1243.chr22.nnic	NA	35551132	35553864	Gene ID= novel_gene_chr22_1244 TPM= 2.12 Transcript Type= NA
chr22	35606763	35610982	35606763	35610982	-	transcript1272.chr22.nnic@NA	transcript1272.chr22.nnic	NA	35606763	35610982	Gene ID= novel_gene_chr22_1273 TPM= 16.99 Transcript Type= NA
chr22	35606764	35615713	35606764	35615713	-	ENST00000401702.5@MB	ENST00000401702.5	protein_coding	35615574,35610884,35606764	35615713,35611106,35607443	Gene ID= ENSG00000198125.12 TPM= 225.78 Transcript Type= protein_coding
chr22	35606764	35617456	35606764	35617456	-	ENST00000397326.6@MB	ENST00000397326.6	protein_coding	35617163,35610884,35606764	35617456,35611106,35607443	Gene ID= ENSG00000198125.12 TPM= 1014.97 Transcript Type= protein_coding
chr22	35606764	35617508	35606764	35617508	-	ENST00000397328.5@MB	ENST00000397328.5	protein_coding	35617362,35617163,35610884,35606764	35617508,35617265,35611106,35607443	Gene ID= ENSG00000198125.12 TPM= 1632.08 Transcript Type= protein_coding
chr22	35609371	35614500	35609371	35614500	+	transcript1270.chr22.nnic@NA	transcript1270.chr22.nnic	NA	35609371	35614500	Gene ID= novel_gene_chr22_1271 TPM= 22.31 Transcript Type= NA
chr22	35743602	35895070	35743602	35895070	-	transcript1281.chr22.nnic@RBFOX2	transcript1281.chr22.nnic	protein_coding	35894813,35809780,35781600,35778025,35768257,35765423,35761415,35761202,35759888,35752613,35746473,35745923,35743602	35895070,35810004,35781743,35778078,35768349,35765483,35761468,35761294,35760032,35752655,35746561,35745995,35744249	Gene ID= ENSG00000100320.22 TPM= 7.38 Transcript Type= NA
chr22	35743933	35840470	35743933	35840470	-	transcript1282.chr22.nic@RBFOX2	transcript1282.chr22.nic	protein_coding	35840192,35809780,35781600,35778025,35768257,35765423,35761415,35761202,35759888,35752613,35746473,35745923,35743933	35840470,35810004,35781743,35778078,35768349,35765483,35761468,35761294,35760020,35752655,35746561,35745995,35744249	Gene ID= ENSG00000100320.22 TPM= 4.25 Transcript Type= NA
chr22	35744087	35895070	35744087	35895070	-	transcript1291.chr22.nnic@RBFOX2	transcript1291.chr22.nnic	protein_coding	35894813,35809780,35781600,35778025,35768257,35765423,35761415,35761202,35759888,35746473,35745923,35744087	35895070,35810004,35781743,35778078,35768349,35765483,35761468,35761294,35760020,35746561,35745995,35744249	Gene ID= ENSG00000100320.22 TPM= 2.78 Transcript Type= NA
chr22	35777016	35895070	35777016	35895070	-	transcript1293.chr22.nnic@RBFOX2	transcript1293.chr22.nnic	protein_coding	35894813,35809780,35781600,35777016	35895070,35810004,35781743,35778078	Gene ID= ENSG00000100320.22 TPM= 2.43 Transcript Type= NA
chr22	35771569	35775859	35771569	35775859	+	transcript1297.chr22.nnic@NA	transcript1297.chr22.nnic	NA	35771569	35775859	Gene ID= novel_gene_chr22_1298 TPM= 11.68 Transcript Type= NA
chr22	35805982	35809068	35805982	35809068	+	transcript1295.chr22.nnic@NA	transcript1295.chr22.nnic	NA	35805982	35809068	Gene ID= novel_gene_chr22_1296 TPM= 5.31 Transcript Type= NA
chr22	35838266	35840460	35838266	35840460	-	transcript1299.chr22.nnic@NA	transcript1299.chr22.nnic	NA	35838266	35840460	Gene ID= novel_gene_chr22_1300 TPM= 7.44 Transcript Type= NA
chr22	36140330	36160929	36140330	36160929	-	ENST00000349314.6@APOL3	ENST00000349314.6	protein_coding	36160669,36145473,36140330	36160929,36145599,36142058	Gene ID= ENSG00000128284.19 TPM= 6.37 Transcript Type= protein_coding
chr22	36189129	36204840	36189129	36204840	-	ENST00000616056.4@APOL4	ENST00000616056.4	protein_coding	36204628,36201993,36201700,36199330,36195311,36189129	36204840,36202055,36201888,36199376,36195437,36191912	Gene ID= ENSG00000100336.17 TPM= 6.37 Transcript Type= protein_coding
chr22	36253090	36267521	36253090	36267521	+	transcript1319.chr22.nnic@APOL1	transcript1319.chr22.nnic	protein_coding	36253090,36254937,36257083,36257319,36261596,36265151,36266848	36253219,36254999,36257136,36257407,36261722,36266149,36267521	Gene ID= ENSG00000100342.20 TPM= 5.31 Transcript Type= NA
chr22	36281281	36388018	36281281	36388018	-	ENST00000216181.9@MYH9	ENST00000216181.9	protein_coding	36387807,36348904,36341370,36327461,36326568,36322429,36321758,36320798,36320220,36319540,36318207,36316517,36314145,36312049,36309282,36306414,36305930,36305033,36303995,36302568,36301534,36300851,36300127,36298919,36296843,36295505,36294932,36294092,36293759,36293329,36291986,36289085,36288727,36288252,36286718,36285865,36285658,36285121,36284403,36284093,36281281	36388018,36349255,36341526,36327488,36326661,36322521,36321821,36320896,36320363,36319635,36318325,36316669,36314318,36312222,36309396,36306607,36306051,36305102,36304155,36302676,36301665,36301057,36300264,36299042,36297014,36295717,36295076,36294298,36293863,36293481,36292234,36289297,36288939,36288413,36286846,36285953,36285781,36285329,36284511,36284265,36282785	Gene ID= ENSG00000100345.20 TPM= 123.21 Transcript Type= protein_coding
chr22	36325031	36388018	36325031	36388018	-	transcript1338.chr22.nnic@MYH9	transcript1338.chr22.nnic	protein_coding	36387807,36348904,36341370,36327461,36326568,36326024,36325031	36388018,36349255,36341526,36327488,36326661,36326035,36325123	Gene ID= ENSG00000100345.20 TPM= 8.5 Transcript Type= NA
chr22	36308687	36310283	36308687	36310283	+	transcript1347.chr22.nnic@NA	transcript1347.chr22.nnic	NA	36308687	36310283	Gene ID= novel_gene_chr22_1348 TPM= 5.31 Transcript Type= NA
chr22	36340360	36342643	36340360	36342643	+	transcript1349.chr22.nnic@NA	transcript1349.chr22.nnic	NA	36340360	36342643	Gene ID= novel_gene_chr22_1350 TPM= 2.12 Transcript Type= NA
chr22	36374068	36376251	36374068	36376251	-	transcript1353.chr22.nnic@NA	transcript1353.chr22.nnic	NA	36374068	36376251	Gene ID= novel_gene_chr22_1354 TPM= 2.12 Transcript Type= NA
chr22	36383671	36384610	36383671	36384610	+	transcript1345.chr22.nnic@NA	transcript1345.chr22.nnic	NA	36383671	36384610	Gene ID= novel_gene_chr22_1346 TPM= 19.12 Transcript Type= NA
chr22	36385184	36387963	36385184	36387963	-	transcript1355.chr22.nnic@NA	transcript1355.chr22.nnic	NA	36385184	36387963	Gene ID= novel_gene_chr22_1356 TPM= 2.12 Transcript Type= NA
chr22	36467036	36481648	36467036	36481648	-	transcript1359.chr22.nnic@TXN2	transcript1359.chr22.nnic	protein_coding	36481564,36480575,36476733,36467797,36467036	36481648,36480837,36476856,36467917,36467327	Gene ID= ENSG00000100348.9 TPM= 10.97 Transcript Type= NA
chr22	36467046	36481634	36467046	36481634	-	ENST00000416967.1@TXN2	ENST00000416967.1	protein_coding	36481564,36480575,36476733,36467046	36481634,36480787,36476856,36467917	Gene ID= ENSG00000100348.9 TPM= 18.59 Transcript Type= protein_coding
chr22	36467036	36482030	36467036	36482030	-	ENST00000216185.6@TXN2	ENST00000216185.6	protein_coding	36481564,36480575,36476733,36467036	36482030,36480837,36476856,36467917	Gene ID= ENSG00000100348.9 TPM= 260.41 Transcript Type= protein_coding
chr22	36510850	36529436	36510850	36529436	-	ENST00000216190.12@EIF3D	ENST00000216190.12	protein_coding	36529076,36525999,36525664,36524596,36523895,36523209,36520576,36519405,36518763,36517301,36516705,36516478,36512460,36511503,36510850	36529436,36526131,36525709,36524732,36523980,36523281,36520688,36519537,36518910,36517431,36516790,36516607,36512602,36511786,36511000	Gene ID= ENSG00000100353.17 TPM= 154.01 Transcript Type= protein_coding
chr22	36758211	36776136	36758211	36776136	-	transcript1377.chr22.nic@IFT27	transcript1377.chr22.nic	protein_coding	36776031,36775674,36767783,36767306,36766138,36763919,36762904,36758211	36776136,36775794,36767862,36767365,36766197,36764036,36763013,36758409	Gene ID= ENSG00000100360.14 TPM= 18.94 Transcript Type= NA
chr22	36758202	36776153	36758202	36776153	-	ENST00000340630.9@IFT27	ENST00000340630.9	protein_coding	36775674,36767783,36767306,36766138,36763919,36762904,36758202	36776153,36767859,36767365,36766197,36764036,36763013,36758409	Gene ID= ENSG00000100360.14 TPM= 39.65 Transcript Type= protein_coding
chr22	36772403	36776256	36772403	36776256	-	ENST00000476548.1@IFT27	ENST00000476548.1	protein_coding	36775674,36772403	36776256,36772721	Gene ID= ENSG00000100360.14 TPM= 1.06 Transcript Type= processed_transcript
chr22	36758203	36776133	36758203	36776133	-	ENST00000433985.6@IFT27	ENST00000433985.6	protein_coding	36775674,36767783,36767306,36766138,36763919,36762904,36758203	36776133,36767862,36767365,36766197,36764036,36763013,36758409	Gene ID= ENSG00000100360.14 TPM= 41.24 Transcript Type= protein_coding
chr22	36860988	36878015	36860988	36878015	+	ENST00000248899.10@NCF4	ENST00000248899.10	protein_coding	36860988,36864045,36864919,36867392,36870415,36871652,36872327,36875653,36876029,36877628	36861203,36864129,36865072,36867462,36870542,36871709,36872425,36875783,36876094,36878015	Gene ID= ENSG00000100365.14 TPM= 4.25 Transcript Type= protein_coding
chr22	36860988	36878015	36860988	36878015	+	ENST00000397147.6@NCF4	ENST00000397147.6	protein_coding	36860988,36864045,36864919,36867392,36870415,36871652,36872327,36875653,36877628	36861203,36864129,36865072,36867462,36870542,36871709,36872425,36876094,36878015	Gene ID= ENSG00000100365.14 TPM= 3.19 Transcript Type= protein_coding
chr22	36936700	36940443	36936700	36940443	+	transcript1385.chr22.nnic@NA	transcript1385.chr22.nnic	NA	36936700	36940443	Gene ID= novel_gene_chr22_1386 TPM= 8.5 Transcript Type= NA
chr22	37010859	37019467	37010859	37019467	-	ENST00000403892.7@TST	ENST00000403892.7	protein_coding	37018138,37010859	37019467,37011325	Gene ID= ENSG00000128311.13 TPM= 19.12 Transcript Type= protein_coding
chr22	37019775	37029815	37019775	37029815	+	transcript1387.chr22.nnic@MPST	transcript1387.chr22.nnic	protein_coding	37019775,37023752,37024192,37026999,37029216	37019872,37023927,37024810,37027095,37029815	Gene ID= ENSG00000128309.16 TPM= 4.25 Transcript Type= NA
chr22	37019762	37029796	37019762	37029796	+	transcript1392.chr22.nic@MPST	transcript1392.chr22.nic	protein_coding	37019762,37024192,37025002,37029216	37019872,37024810,37025127,37029796	Gene ID= ENSG00000128309.16 TPM= 5.31 Transcript Type= NA
chr22	37019762	37029815	37019762	37029815	+	transcript1393.chr22.nnic@MPST	transcript1393.chr22.nnic	protein_coding	37019762,37024192,37026999,37029216	37019872,37024810,37027095,37029815	Gene ID= ENSG00000128309.16 TPM= 9.56 Transcript Type= NA
chr22	37019768	37029819	37019768	37029819	+	ENST00000341116.7@MPST	ENST00000341116.7	protein_coding	37019768,37023752,37024192,37029216	37019872,37023927,37024810,37029819	Gene ID= ENSG00000128309.16 TPM= 23.55 Transcript Type= protein_coding
chr22	37019768	37029822	37019768	37029822	+	ENST00000429360.5@MPST	ENST00000429360.5	protein_coding	37019768,37024192,37029216	37019872,37024810,37029822	Gene ID= ENSG00000128309.16 TPM= 96.84 Transcript Type= protein_coding
chr22	37024261	37027566	37024261	37027566	+	transcript1404.chr22.nnic@NA	transcript1404.chr22.nnic	NA	37024261	37027566	Gene ID= novel_gene_chr22_1405 TPM= 2.12 Transcript Type= NA
chr22	37051710	37063390	37051710	37063390	+	transcript1407.chr22.nnic@KCTD17	transcript1407.chr22.nnic	protein_coding	37051710,37053100,37056320,37057398,37059313,37060823,37061104,37061539,37062525	37051949,37053208,37056411,37057493,37059438,37060922,37061384,37061629,37063390	Gene ID= ENSG00000100379.17 TPM= 14.79 Transcript Type= NA
chr22	37051710	37063390	37051710	37063390	+	transcript1409.chr22.nnic@KCTD17	transcript1409.chr22.nnic	protein_coding	37051710,37053100,37056320,37057398,37059313,37060823,37061539,37062525	37051949,37053208,37056411,37057493,37059438,37060891,37061629,37063390	Gene ID= ENSG00000100379.17 TPM= 11.6 Transcript Type= NA
chr22	37051710	37063390	37051710	37063390	+	transcript1413.chr22.nnic@KCTD17	transcript1413.chr22.nnic	protein_coding	37051710,37053100,37056320,37057398,37059313,37061104,37061539,37062525	37051949,37053208,37056411,37057493,37059438,37061175,37061629,37063390	Gene ID= ENSG00000100379.17 TPM= 11.6 Transcript Type= NA
chr22	37051710	37063390	37051710	37063390	+	transcript1415.chr22.nnic@KCTD17	transcript1415.chr22.nnic	protein_coding	37051710,37053100,37056320,37057398,37059313,37060823,37062525	37051949,37053208,37056411,37057493,37059438,37060922,37063390	Gene ID= ENSG00000100379.17 TPM= 13.54 Transcript Type= NA
chr22	37051763	37063390	37051763	37063390	+	transcript1417.chr22.nnic@KCTD17	transcript1417.chr22.nnic	protein_coding	37051763,37053100,37056320,37057398,37059313,37061104,37062525	37051949,37053208,37056411,37057493,37059438,37061629,37063390	Gene ID= ENSG00000100379.17 TPM= 13.72 Transcript Type= NA
chr22	37051739	37063390	37051739	37063390	+	ENST00000402077.7@KCTD17	ENST00000402077.7	protein_coding	37051739,37053100,37056320,37057398,37059313,37060823,37061539,37062525	37051949,37053208,37056411,37057493,37059438,37060922,37061629,37063390	Gene ID= ENSG00000100379.17 TPM= 48.77 Transcript Type= protein_coding
chr22	37051736	37063389	37051736	37063389	+	ENST00000610767.4@KCTD17	ENST00000610767.4	protein_coding	37051736,37053100,37056320,37057398,37059313,37062525	37051949,37053208,37056411,37057493,37059438,37063389	Gene ID= ENSG00000100379.17 TPM= 24.16 Transcript Type= protein_coding
chr22	37051739	37063390	37051739	37063390	+	ENST00000403888.7@KCTD17	ENST00000403888.7	protein_coding	37051739,37053100,37056320,37057398,37059313,37060823,37061104,37061539,37062525	37051949,37053208,37056411,37057493,37059438,37060922,37061175,37061629,37063390	Gene ID= ENSG00000100379.17 TPM= 11.6 Transcript Type= protein_coding
chr22	37180167	37188289	37180167	37188289	-	ENST00000337843.6@C1QTNF6	ENST00000337843.6	protein_coding	37188163,37185218,37180167	37188289,37185455,37182735	Gene ID= ENSG00000133466.13 TPM= 5.31 Transcript Type= protein_coding
chr22	37225261	37244270	37225261	37244270	-	ENST00000249071.10@RAC2	ENST00000249071.10	protein_coding	37244114,37241587,37232801,37231932,37231231,37226671,37225261	37244270,37241658,37232918,37231994,37231390,37226803,37226039	Gene ID= ENSG00000128340.14 TPM= 5.31 Transcript Type= protein_coding
chr22	37282383	37315345	37282383	37315345	+	ENST00000248901.10@CYTH4	ENST00000248901.10	protein_coding	37282383,37292621,37294660,37295999,37297564,37299226,37300907,37303254,37309212,37310988,37311456,37312020,37313439	37282588,37292703,37294724,37296065,37297682,37299306,37301019,37303402,37309323,37311064,37311527,37312174,37315345	Gene ID= ENSG00000100055.20 TPM= 4.25 Transcript Type= protein_coding
chr22	37282525	37315341	37282525	37315341	+	ENST00000462927.5@CYTH4	ENST00000462927.5	protein_coding	37282525,37292621,37294660,37295999,37297564,37299226,37300907,37303254,37304172,37309212,37310988,37311456,37313439	37282588,37292703,37294724,37296065,37297682,37299306,37301019,37303402,37304286,37309323,37311064,37312174,37315341	Gene ID= ENSG00000100055.20 TPM= 2.12 Transcript Type= retained_intron
chr22	37469065	37486401	37469065	37486401	-	ENST00000356998.7@MFNG	ENST00000356998.7	protein_coding	37485923,37480721,37480197,37479345,37476896,37474512,37472443,37469065	37486401,37480769,37480299,37479498,37476981,37474677,37472528,37470029	Gene ID= ENSG00000100060.17 TPM= 11.68 Transcript Type= protein_coding
chr22	37490362	37519542	37490362	37519542	-	ENST00000403299.5@CARD10	ENST00000403299.5	protein_coding	37519343,37518966,37517971,37515973,37510212,37508527,37507829,37506192,37504635,37504186,37503185,37502602,37497019,37496449,37495760,37495517,37494086,37492644,37492435,37491755,37490362	37519542,37519217,37518108,37516298,37510421,37508682,37507954,37506383,37504769,37504301,37503213,37502725,37497178,37496560,37496003,37495586,37494188,37492802,37492550,37491867,37491393	Gene ID= ENSG00000100065.14 TPM= 8.5 Transcript Type= protein_coding
chr22	37560447	37569405	37560447	37569405	+	ENST00000249014.4@CDC42EP1	ENST00000249014.4	protein_coding	37560447,37566072,37568108	37560588,37566812,37569405	Gene ID= ENSG00000128283.6 TPM= 43.55 Transcript Type= protein_coding
chr22	37560486	37562943	37560486	37562943	+	transcript1438.chr22.nnic@NA	transcript1438.chr22.nnic	NA	37560486	37562943	Gene ID= novel_gene_chr22_1439 TPM= 2.12 Transcript Type= NA
chr22	37608475	37633564	37608475	37633564	+	ENST00000343632.8@GGA1	ENST00000343632.8	protein_coding	37608475,37614190,37616922,37618448,37620238,37620813,37621616,37623327,37623552,37624969,37625797,37629462,37629998,37630903,37631996,37632405,37632601	37608903,37614274,37616997,37618546,37620361,37620913,37621696,37623467,37623633,37625076,37625949,37629526,37630170,37631099,37632165,37632515,37633564	Gene ID= ENSG00000100083.18 TPM= 43.55 Transcript Type= protein_coding
chr22	37608949	37633563	37608949	37633563	+	transcript1441.chr22.nic@GGA1	transcript1441.chr22.nic	protein_coding	37608949,37614190,37616922,37618448,37620238,37620813,37621616,37623327,37623552,37624969,37625797,37629462,37629998,37630903,37631996,37632405,37632601	37609154,37614274,37616997,37618546,37620361,37620913,37621696,37623467,37623633,37625076,37625949,37629526,37630170,37631099,37632165,37632515,37633563	Gene ID= ENSG00000100083.18 TPM= 14.87 Transcript Type= NA
chr22	37608732	37627162	37608732	37627162	+	transcript1444.chr22.nic@GGA1	transcript1444.chr22.nic	protein_coding	37608732,37614190,37616922,37618448,37620238,37620813,37621616,37623327,37623552,37624969,37625797	37608903,37614274,37616997,37618546,37620361,37620913,37621696,37623467,37623633,37625076,37627162	Gene ID= ENSG00000100083.18 TPM= 2.12 Transcript Type= NA
chr22	37608845	37633564	37608845	37633564	+	ENST00000325180.12@GGA1	ENST00000325180.12	protein_coding	37608845,37614190,37616922,37618448,37620238,37620813,37621616,37623327,37623552,37629462,37629998,37630903,37631996,37632405,37632601	37608903,37614274,37616997,37618546,37620361,37620913,37621696,37623467,37623633,37629526,37630170,37631099,37632165,37632515,37633564	Gene ID= ENSG00000100083.18 TPM= 14.87 Transcript Type= protein_coding
chr22	37608830	37618146	37608830	37618146	+	ENST00000489772.5@GGA1	ENST00000489772.5	protein_coding	37608830,37614190,37616922	37608903,37614274,37618146	Gene ID= ENSG00000100083.18 TPM= 3.19 Transcript Type= retained_intron
chr22	37658727	37666934	37658727	37666934	+	ENST00000215904.6@PDXP	ENST00000215904.6	protein_coding	37658727,37665555	37659356,37666934	Gene ID= ENSG00000241360.1 TPM= 92.41 Transcript Type= protein_coding
chr22	37675608	37679806	37675608	37679806	+	ENST00000215909.9@LGALS1	ENST00000215909.9	protein_coding	37675608,37676986,37678483,37679603	37675711,37677065,37678654,37679806	Gene ID= ENSG00000100097.11 TPM= 500.81 Transcript Type= protein_coding
chr22	37686323	37693476	37686323	37693476	+	ENST00000438329.5@NOL12	ENST00000438329.5	protein_coding	37686323,37687910,37688312,37688850,37690697,37691174,37693332	37686475,37688015,37688360,37688992,37690794,37691424,37693476	Gene ID= ENSG00000273899.4 TPM= 13.81 Transcript Type= nonsense_mediated_decay
chr22	37686323	37693478	37686323	37693478	+	ENST00000359114.8@NOL12	ENST00000359114.8	protein_coding	37686323,37687910,37688312,37688850,37690697,37691174	37686475,37688015,37688360,37688992,37690794,37693478	Gene ID= ENSG00000273899.4 TPM= 15.93 Transcript Type= protein_coding
chr22	37746211	37774140	37746211	37774140	+	transcript1473.chr22.nnic@TRIOBP	transcript1473.chr22.nnic	protein_coding	37746211,37751772,37754916,37755101,37755550,37757613,37759154,37765670,37768074,37769028,37769262,37771650,37772601,37773783	37746420,37751828,37754984,37755190,37755659,37758138,37759264,37765817,37768176,37769187,37769375,37771736,37772764,37774140	Gene ID= ENSG00000100106.19 TPM= 47.8 Transcript Type= NA
chr22	37746211	37774140	37746211	37774140	+	transcript1485.chr22.nic@TRIOBP	transcript1485.chr22.nic	protein_coding	37746211,37751772,37754877,37755101,37755550,37757613,37759154,37765670,37768074,37769028,37769262,37771650,37772601	37746420,37751828,37754984,37755190,37755659,37758138,37759264,37765817,37768176,37769187,37769375,37771736,37774140	Gene ID= ENSG00000100106.19 TPM= 37.71 Transcript Type= NA
chr22	37746211	37774140	37746211	37774140	+	transcript1488.chr22.nic@TRIOBP	transcript1488.chr22.nic	protein_coding	37746211,37751772,37755101,37755550,37757613,37759154,37765670,37768074,37769028,37769262,37771650,37772601,37773783	37746420,37751828,37755190,37755659,37758138,37759264,37765817,37768176,37769187,37769375,37771736,37772764,37774140	Gene ID= ENSG00000100106.19 TPM= 15.93 Transcript Type= NA
chr22	37746233	37774140	37746233	37774140	+	ENST00000403663.6@TRIOBP	ENST00000403663.6	protein_coding	37746233,37751772,37754877,37755101,37755550,37757613,37759154,37765670,37768074,37769028,37769262,37771650,37772601,37773783	37746420,37751828,37754984,37755190,37755659,37758138,37759264,37765817,37768176,37769187,37769375,37771736,37772764,37774140	Gene ID= ENSG00000100106.19 TPM= 284.66 Transcript Type= protein_coding
chr22	37746228	37760346	37746228	37760346	+	ENST00000407319.6@TRIOBP	ENST00000407319.6	protein_coding	37746228,37751772,37754877,37755101,37755550,37757613,37759154,37759417	37746420,37751828,37754984,37755190,37755659,37758138,37759264,37760346	Gene ID= ENSG00000100106.19 TPM= 7.44 Transcript Type= protein_coding
chr22	37774099	37774348	37774099	37774348	-	transcript1511.chr22.nnic@NA	transcript1511.chr22.nnic	NA	37774099	37774348	Gene ID= novel_gene_chr22_1512 TPM= 3.19 Transcript Type= NA
chr22	37782056	37784707	37782056	37784707	+	transcript1524.chr22.nnic@NA	transcript1524.chr22.nnic	NA	37782056	37784707	Gene ID= novel_gene_chr22_1525 TPM= 2.12 Transcript Type= NA
chr22	37805093	37807436	37805093	37807436	+	ENST00000340857.3@H1F0	ENST00000340857.3	protein_coding	37805093	37807436	Gene ID= ENSG00000189060.5 TPM= 49.92 Transcript Type= protein_coding
chr22	37807872	37816899	37807872	37816899	+	transcript1515.chr22.nnic@GCAT	transcript1515.chr22.nnic	protein_coding	37807872,37810027,37812887,37813463,37815126,37815418,37815663,37816200,37816567	37808163,37810157,37812988,37813609,37815280,37815500,37815876,37816321,37816899	Gene ID= ENSG00000100116.16 TPM= 4.25 Transcript Type= NA
chr22	37807912	37816899	37807912	37816899	+	transcript1516.chr22.nic@GCAT	transcript1516.chr22.nic	protein_coding	37807912,37809949,37812887,37813463,37815126,37815418,37815663,37816200,37816567	37808163,37810157,37812988,37813609,37815280,37815500,37815834,37816321,37816899	Gene ID= ENSG00000100116.16 TPM= 9.56 Transcript Type= NA
chr22	37807912	37816899	37807912	37816899	+	ENST00000248924.10@GCAT	ENST00000248924.10	protein_coding	37807912,37810027,37812887,37813463,37815126,37815418,37815663,37816200,37816567	37808163,37810157,37812988,37813609,37815280,37815500,37815834,37816321,37816899	Gene ID= ENSG00000100116.16 TPM= 49.92 Transcript Type= protein_coding
chr22	37830856	37844358	37830856	37844358	-	transcript1519.chr22.nic@ANKRD54	transcript1519.chr22.nic	protein_coding	37843911,37840187,37833684,37833159,37832958,37832637,37830856	37844358,37840234,37833755,37833206,37833082,37832744,37832017	Gene ID= ENSG00000100124.14 TPM= 13.28 Transcript Type= NA
chr22	37830855	37844431	37830855	37844431	-	ENST00000215941.8@ANKRD54	ENST00000215941.8	protein_coding	37843911,37840187,37838500,37833684,37833159,37832958,37832637,37830855	37844431,37840234,37838598,37833755,37833206,37833082,37832744,37832017	Gene ID= ENSG00000100124.14 TPM= 51.51 Transcript Type= protein_coding
chr22	37836573	37837041	37836573	37837041	+	transcript1522.chr22.nnic@NA	transcript1522.chr22.nnic	NA	37836573	37837041	Gene ID= novel_gene_chr22_1523 TPM= 4.25 Transcript Type= NA
chr22	37849372	37888782	37849372	37888782	+	ENST00000624234.3@EIF3L	ENST00000624234.3	protein_coding	37849372,37850015,37851280,37855565,37858679,37862969,37863272,37870176,37874370,37875841,37877674,37886765,37888426	37849482,37850063,37851490,37855644,37858740,37863038,37863345,37870347,37874524,37876011,37878171,37886845,37888782	Gene ID= ENSG00000100129.17 TPM= 303.78 Transcript Type= protein_coding
chr22	37849421	37886868	37849421	37886868	+	ENST00000477256.5@EIF3L	ENST00000477256.5	protein_coding	37849421,37850015,37851280,37855565,37858679,37862969,37863272,37870176,37874370,37875841,37877674,37886765	37849482,37850063,37851490,37855644,37858740,37863038,37863345,37870347,37874524,37876011,37878171,37886868	Gene ID= ENSG00000100129.17 TPM= 2.12 Transcript Type= retained_intron
chr22	37953663	37969312	37953663	37969312	+	ENST00000442738.6@POLR2F	ENST00000442738.6	protein_coding	37953663,37956773,37959346,37967099,37967625	37953807,37956842,37959476,37967170,37969312	Gene ID= ENSG00000100142.14 TPM= 48.86 Transcript Type= protein_coding
chr22	37953672	37967801	37953672	37967801	+	transcript1542.chr22.nnic@POLR2F	transcript1542.chr22.nnic	protein_coding	37953672,37956773,37967099,37967625	37953807,37956842,37967170,37967801	Gene ID= ENSG00000100142.14 TPM= 8.5 Transcript Type= NA
chr22	37972300	37984537	37972300	37984537	-	ENST00000396884.6@SOX10	ENST00000396884.6	protein_coding	37984339,37983357,37977867,37972300	37984537,37983868,37978135,37974198	Gene ID= ENSG00000100146.16 TPM= 1.06 Transcript Type= protein_coding
chr22	38057206	38075701	38057206	38075701	+	transcript1544.chr22.nic@PICK1	transcript1544.chr22.nic	protein_coding	38057206,38057753,38059234,38065002,38067704,38069033,38070838,38071682,38072477,38073000,38073773,38074307,38074864	38057436,38057850,38059345,38065130,38067770,38069122,38070891,38071744,38072610,38073092,38073823,38074451,38075701	Gene ID= ENSG00000100151.15 TPM= 8.58 Transcript Type= NA
chr22	38057200	38075701	38057200	38075701	+	ENST00000404072.7@PICK1	ENST00000404072.7	protein_coding	38057200,38057753,38059234,38065002,38067704,38069033,38070838,38071682,38072477,38073000,38073773,38074307,38074864	38057489,38057850,38059345,38065130,38067770,38069122,38070891,38071744,38072610,38073092,38073823,38074451,38075701	Gene ID= ENSG00000100151.15 TPM= 8.58 Transcript Type= protein_coding
chr22	38057390	38075701	38057390	38075701	+	transcript1548.chr22.nic@PICK1	transcript1548.chr22.nic	protein_coding	38057390,38057753,38059234,38065002,38067704,38069033,38070838,38071682,38072477,38073000,38073773,38074864	38057587,38057850,38059345,38065130,38067770,38069122,38070891,38071744,38072610,38073092,38074451,38075701	Gene ID= ENSG00000100151.15 TPM= 3.98 Transcript Type= NA
chr22	38057407	38075701	38057407	38075701	+	ENST00000356976.7@PICK1	ENST00000356976.7	protein_coding	38057407,38057753,38059234,38065002,38067704,38069033,38070838,38071682,38072477,38073000,38073773,38074307,38074864	38057587,38057850,38059345,38065130,38067770,38069122,38070891,38071744,38072610,38073092,38073823,38074451,38075701	Gene ID= ENSG00000100151.15 TPM= 10.71 Transcript Type= protein_coding
chr22	38084889	38110670	38084889	38110670	-	ENST00000381669.7@BAIAP2L2	ENST00000381669.7	protein_coding	38110475,38109133,38108255,38107852,38098411,38098063,38097032,38089522,38089096,38088748,38087124,38086242,38085686,38084889	38110670,38109208,38108341,38107913,38098482,38098179,38097178,38089674,38089231,38088964,38087264,38086449,38085732,38085375	Gene ID= ENSG00000128298.16 TPM= 1.06 Transcript Type= protein_coding
chr22	38111500	38181829	38111500	38181829	-	ENST00000402064.5@PLA2G6	ENST00000402064.5	protein_coding	38181784,38169218,38145438,38143105,38139982,38134988,38132831,38129454,38126371,38123095,38120759,38116075,38115527,38113487,38112504,38111500	38181829,38169471,38145653,38143288,38140169,38135084,38133013,38129562,38126449,38123258,38120909,38116211,38115681,38113654,38112577,38112305	Gene ID= ENSG00000184381.18 TPM= 5.31 Transcript Type= protein_coding
chr22	38202025	38216500	38202025	38216500	+	transcript1567.chr22.nnic@MAFF	transcript1567.chr22.nnic	protein_coding	38202025,38213823,38214420,38216378	38202212,38213889,38216216,38216500	Gene ID= ENSG00000185022.11 TPM= 2.12 Transcript Type= NA
chr22	38201882	38216511	38201882	38216511	+	ENST00000338483.6@MAFF	ENST00000338483.6	protein_coding	38201882,38213823,38214420	38202212,38213889,38216511	Gene ID= ENSG00000185022.11 TPM= 54.17 Transcript Type= protein_coding
chr22	38219312	38273010	38219312	38273010	-	ENST00000436674.5@TMEM184B	ENST00000436674.5	protein_coding	38272884,38247770,38246785,38245935,38231244,38230669,38226779,38225424,38224785,38219312	38273010,38248019,38246885,38246100,38231334,38230744,38226870,38225593,38224979,38221710	Gene ID= ENSG00000198792.12 TPM= 13.63 Transcript Type= nonsense_mediated_decay
chr22	38219291	38273034	38219291	38273034	-	ENST00000361906.7@TMEM184B	ENST00000361906.7	protein_coding	38272884,38247770,38245935,38231244,38230669,38226779,38225424,38224785,38219291	38273034,38248019,38246100,38231334,38230744,38226870,38225593,38224979,38221710	Gene ID= ENSG00000198792.12 TPM= 57.18 Transcript Type= protein_coding
chr22	38219326	38224394	38219326	38224394	-	transcript1573.chr22.nic@TMEM184B	transcript1573.chr22.nic	protein_coding	38222642,38219326	38224394,38221710	Gene ID= ENSG00000198792.12 TPM= 7.97 Transcript Type= NA
chr22	38224109	38226133	38224109	38226133	-	transcript1574.chr22.nic@TMEM184B	transcript1574.chr22.nic	protein_coding	38225424,38224109	38226133,38224979	Gene ID= ENSG00000198792.12 TPM= 2.12 Transcript Type= NA
chr22	38219312	38224103	38219312	38224103	-	ENST00000633056.1@TMEM184B	ENST00000633056.1	protein_coding	38219312	38224103	Gene ID= ENSG00000198792.12 TPM= 9.38 Transcript Type= retained_intron
chr22	38291859	38317010	38291859	38317010	-	transcript1582.chr22.nic@CSNK1E	transcript1582.chr22.nic	protein_coding	38316665,38314082,38303138,38302861,38300724,38299895,38298786,38294342,38294109,38293255,38291859	38317010,38314169,38303248,38303009,38300952,38300065,38298934,38294534,38294248,38293319,38291938	Gene ID= ENSG00000213923.11 TPM= 3.19 Transcript Type= NA
chr22	38293250	38317439	38293250	38317439	-	ENST00000403904.5@CSNK1E	ENST00000403904.5	protein_coding	38317160,38314082,38303138,38302861,38300724,38299895,38298786,38294342,38294109,38293250	38317439,38314169,38303248,38303009,38300952,38300065,38298934,38294534,38294248,38293319	Gene ID= ENSG00000213923.11 TPM= 2.76 Transcript Type= protein_coding
chr22	38291895	38317417	38291895	38317417	-	transcript1589.chr22.nic@CSNK1E	transcript1589.chr22.nic	protein_coding	38317160,38314082,38303138,38302861,38300724,38299895,38298786,38294342,38291895	38317417,38314169,38303248,38303009,38300952,38300065,38298934,38294534,38294248	Gene ID= ENSG00000213923.11 TPM= 8.07 Transcript Type= NA
chr22	38296206	38317417	38296206	38317417	-	transcript1591.chr22.nic@CSNK1E	transcript1591.chr22.nic	protein_coding	38317160,38314082,38303138,38302861,38300724,38299895,38298786,38298094,38296206	38317417,38314169,38303248,38303009,38300952,38300065,38298934,38298203,38297998	Gene ID= ENSG00000213923.11 TPM= 4.89 Transcript Type= NA
chr22	38296206	38317439	38296206	38317439	-	ENST00000405675.7@CSNK1E	ENST00000405675.7	protein_coding	38317160,38314082,38303138,38302861,38300724,38299895,38298786,38296206	38317439,38314169,38303248,38303009,38300952,38300065,38298934,38297155	Gene ID= ENSG00000213923.11 TPM= 2.76 Transcript Type= protein_coding
chr22	38290692	38317408	38290692	38317408	-	ENST00000396832.5@CSNK1E	ENST00000396832.5	protein_coding	38317160,38314082,38303138,38302861,38300724,38299895,38298786,38294342,38294109,38293255,38290692	38317408,38314169,38303248,38303009,38300952,38300065,38298934,38294534,38294248,38293319,38291938	Gene ID= ENSG00000213923.11 TPM= 194.83 Transcript Type= protein_coding
chr22	38296205	38317411	38296205	38317411	-	ENST00000413574.6@CSNK1E	ENST00000413574.6	protein_coding	38317160,38314082,38303138,38302861,38300724,38299895,38298786,38296205	38317411,38314169,38303248,38303009,38300952,38300065,38298934,38296686	Gene ID= ENSG00000213923.11 TPM= 4.89 Transcript Type= protein_coding
chr22	38297602	38300025	38297602	38300025	-	ENST00000442216.1@CSNK1E	ENST00000442216.1	protein_coding	38299895,38298786,38298094,38297602	38300025,38298934,38298203,38297998	Gene ID= ENSG00000213923.11 TPM= 3.19 Transcript Type= nonsense_mediated_decay
chr22	38361140	38398929	38361140	38398929	-	ENST00000443658.5@Z98749.2	ENST00000443658.5	transcribed_unprocessed_pseudogene	38398780,38380937,38380370,38361140	38398929,38380990,38380423,38361560	Gene ID= ENSG00000244627.5 TPM= 1.06 Transcript Type= processed_transcript
chr22	38352791	38354375	38352791	38354375	-	transcript1623.chr22.nnic@NA	transcript1623.chr22.nnic	NA	38352791	38354375	Gene ID= novel_gene_chr22_1624 TPM= 2.12 Transcript Type= NA
chr22	38370869	38371429	38370869	38371429	-	transcript1621.chr22.nnic@NA	transcript1621.chr22.nnic	NA	38370869	38371429	Gene ID= novel_gene_chr22_1622 TPM= 2.12 Transcript Type= NA
chr22	38394737	38397541	38394737	38397541	+	transcript1617.chr22.nnic@NA	transcript1617.chr22.nnic	NA	38394737	38397541	Gene ID= novel_gene_chr22_1618 TPM= 8.5 Transcript Type= NA
chr22	38468078	38481635	38468078	38481635	+	ENST00000409006.3@KDELR3	ENST00000409006.3	protein_coding	38468078,38474523,38479593,38481212	38468324,38474623,38479751,38481635	Gene ID= ENSG00000100196.10 TPM= 7.44 Transcript Type= protein_coding
chr22	38468062	38483447	38468062	38483447	+	ENST00000216014.8@KDELR3	ENST00000216014.8	protein_coding	38468062,38474523,38479593,38481212,38482496	38468324,38474623,38479751,38481464,38483447	Gene ID= ENSG00000100196.10 TPM= 58.42 Transcript Type= protein_coding
chr22	38485752	38506358	38485752	38506358	-	transcript1628.chr22.nnic@DDX17	transcript1628.chr22.nnic	protein_coding	38505951,38501130,38499400,38498440,38498085,38495796,38494886,38494630,38494021,38493710,38492056,38487873,38485752	38506358,38501280,38499499,38498573,38498150,38495937,38495046,38494802,38494131,38493771,38492117,38488115,38486440	Gene ID= ENSG00000100201.20 TPM= 5.77 Transcript Type= NA
chr22	38491334	38506358	38491334	38506358	-	transcript1632.chr22.nic@DDX17	transcript1632.chr22.nic	protein_coding	38505951,38501130,38499400,38498440,38498085,38495796,38494886,38494630,38494021,38493710,38491334	38506358,38501280,38499499,38498573,38498150,38495937,38495046,38494802,38494131,38493771,38492115	Gene ID= ENSG00000100201.20 TPM= 10.02 Transcript Type= NA
chr22	38492496	38506358	38492496	38506358	-	transcript1634.chr22.nic@DDX17	transcript1634.chr22.nic	protein_coding	38505951,38501130,38499400,38498440,38498085,38495796,38494886,38494630,38494021,38492496	38506358,38501280,38499499,38498573,38498150,38495937,38495046,38494802,38494131,38493771	Gene ID= ENSG00000100201.20 TPM= 5.77 Transcript Type= NA
chr22	38485681	38506294	38485681	38506294	-	ENST00000216019.11@DDX17	ENST00000216019.11	protein_coding	38505951,38501130,38499400,38498440,38498085,38495796,38494886,38494630,38494021,38493710,38487879,38485681	38506294,38501280,38499499,38498573,38498150,38495937,38495046,38494802,38494131,38493771,38492115,38486440	Gene ID= ENSG00000100201.20 TPM= 12.75 Transcript Type= retained_intron
chr22	38484160	38485848	38484160	38485848	+	transcript1646.chr22.nnic@NA	transcript1646.chr22.nnic	NA	38484160,38485748	38485310,38485848	Gene ID= novel_gene_chr22_1647 TPM= 12.75 Transcript Type= NA
chr22	38500339	38500987	38500339	38500987	+	transcript1654.chr22.nnic@NA	transcript1654.chr22.nnic	NA	38500339	38500987	Gene ID= novel_gene_chr22_1655 TPM= 2.12 Transcript Type= NA
chr22	38656640	38673846	38656640	38673846	+	transcript1662.chr22.nnic@CBY1	transcript1662.chr22.nnic	protein_coding	38656640,38670884,38671070,38673159	38656750,38670989,38671188,38673846	Gene ID= ENSG00000100211.10 TPM= 3.54 Transcript Type= NA
chr22	38656655	38673854	38656655	38673854	+	ENST00000216029.7@CBY1	ENST00000216029.7	protein_coding	38656655,38668017,38670884,38671070,38673159	38656750,38668132,38670989,38671188,38673854	Gene ID= ENSG00000100211.10 TPM= 35.4 Transcript Type= protein_coding
chr22	38656651	38673846	38656651	38673846	+	ENST00000396811.6@CBY1	ENST00000396811.6	protein_coding	38656651,38665546,38668017,38670884,38671070,38673159	38656750,38665685,38668132,38670989,38671188,38673846	Gene ID= ENSG00000100211.10 TPM= 8.85 Transcript Type= protein_coding
chr22	38656644	38657985	38656644	38657985	+	transcript1666.chr22.nnic@NA	transcript1666.chr22.nnic	NA	38656644	38657985	Gene ID= novel_gene_chr22_1667 TPM= 2.12 Transcript Type= NA
chr22	38681948	38685421	38681948	38685421	+	ENST00000216034.5@TOMM22	ENST00000216034.5	protein_coding	38681948,38682323,38682879,38683767	38682095,38682441,38682996,38685421	Gene ID= ENSG00000100216.5 TPM= 33.99 Transcript Type= protein_coding
chr22	38719630	38721060	38719630	38721060	-	transcript1686.chr22.nnic@NA	transcript1686.chr22.nnic	NA	38719630	38721060	Gene ID= novel_gene_chr22_1687 TPM= 2.12 Transcript Type= NA
chr22	38733279	38735073	38733279	38735073	-	transcript1688.chr22.nnic@NA	transcript1688.chr22.nnic	NA	38733279	38735073	Gene ID= novel_gene_chr22_1689 TPM= 3.19 Transcript Type= NA
chr22	38734725	38755528	38734725	38755528	-	ENST00000405510.5@SUN2	ENST00000405510.5	protein_coding	38755272,38754642,38752507,38751210,38750898,38750225,38749766,38748713,38745684,38742301,38741494,38741007,38740267,38739722,38739342,38738873,38738587,38738173,38734725	38755528,38754706,38752665,38751373,38751035,38750320,38749859,38748783,38745811,38742555,38741571,38741050,38740432,38739943,38739426,38738988,38738754,38738265,38736380	Gene ID= ENSG00000100242.15 TPM= 83.57 Transcript Type= protein_coding
chr22	38734736	38756032	38734736	38756032	-	transcript1670.chr22.nic@SUN2	transcript1670.chr22.nic	protein_coding	38755763,38754642,38752507,38751210,38750898,38750225,38749766,38748713,38745684,38742301,38741494,38741007,38740267,38739722,38739342,38738873,38738587,38738173,38734736	38756032,38754706,38752665,38751373,38751035,38750320,38749859,38748783,38745811,38742555,38741571,38741050,38740432,38739943,38739426,38738988,38738754,38738265,38736380	Gene ID= ENSG00000100242.15 TPM= 74.01 Transcript Type= NA
chr22	38734736	38756042	38734736	38756042	-	transcript1672.chr22.nic@SUN2	transcript1672.chr22.nic	protein_coding	38755763,38752507,38751210,38750898,38750225,38749766,38748713,38745684,38742301,38741494,38741007,38740267,38739722,38739342,38738873,38738587,38738173,38734736	38756042,38752665,38751373,38751035,38750320,38749859,38748783,38745811,38742555,38741571,38741050,38740432,38739943,38739426,38738988,38738754,38738265,38736380	Gene ID= ENSG00000100242.15 TPM= 158.98 Transcript Type= NA
chr22	38734736	38755983	38734736	38755983	-	transcript1676.chr22.nic@SUN2	transcript1676.chr22.nic	protein_coding	38755763,38752507,38751210,38750225,38749766,38748713,38745684,38742301,38741494,38741007,38740267,38739722,38739342,38738873,38738587,38738173,38734736	38755983,38752665,38751373,38750320,38749859,38748783,38745811,38742555,38741571,38741050,38740432,38739943,38739426,38738988,38738754,38738265,38736380	Gene ID= ENSG00000100242.15 TPM= 33.74 Transcript Type= NA
chr22	38734736	38755999	38734736	38755999	-	ENST00000405018.5@SUN2	ENST00000405018.5	protein_coding	38755763,38752507,38751210,38750898,38750225,38749766,38748713,38745684,38742301,38741494,38741007,38740267,38739722,38739342,38738873,38738587,38738173,38734736	38755999,38752665,38751373,38751035,38750383,38749859,38748783,38745811,38742555,38741571,38741050,38740432,38739943,38739426,38738988,38738754,38738265,38736380	Gene ID= ENSG00000100242.15 TPM= 63.49 Transcript Type= protein_coding
chr22	38741155	38743115	38741155	38743115	+	transcript1684.chr22.nnic@NA	transcript1684.chr22.nnic	NA	38741155	38743115	Gene ID= novel_gene_chr22_1685 TPM= 2.12 Transcript Type= NA
chr22	38778508	38794173	38778508	38794173	-	ENST00000216068.8@DNAL4	ENST00000216068.8	protein_coding	38794068,38782663,38780926,38778508	38794173,38782870,38781009,38779613	Gene ID= ENSG00000100246.12 TPM= 7.44 Transcript Type= protein_coding
chr22	38861450	38872314	38861450	38872314	-	ENST00000407418.7@CBX6	ENST00000407418.7	protein_coding	38872122,38871902,38871692,38871480,38861450	38872314,38871945,38871757,38871546,38867201	Gene ID= ENSG00000183741.11 TPM= 86.04 Transcript Type= protein_coding
chr22	39014083	39020352	39014083	39020352	+	ENST00000361441.4@APOBEC3C	ENST00000361441.4	protein_coding	39014083,39015595,39017766,39018269	39014379,39015751,39018045,39020352	Gene ID= ENSG00000244509.3 TPM= 44.61 Transcript Type= protein_coding
chr22	39077005	39087743	39077005	39087743	+	ENST00000407997.3@APOBEC3G	ENST00000407997.3	protein_coding	39077005,39078932,39080933,39081471,39083731,39086279,39087011,39087407	39077378,39079085,39081227,39081585,39083884,39086567,39087126,39087743	Gene ID= ENSG00000239713.8 TPM= 1.06 Transcript Type= protein_coding
chr22	39130772	39152578	39130772	39152578	-	transcript1707.chr22.nnic@CBX7	transcript1707.chr22.nnic	protein_coding	39152376,39149789,39141371,39138636,39134401,39130772	39152578,39149832,39141436,39138702,39134575,39134048	Gene ID= ENSG00000100307.12 TPM= 2.12 Transcript Type= NA
chr22	39120223	39152578	39120223	39152578	-	transcript1710.chr22.nnic@CBX7	transcript1710.chr22.nnic	protein_coding	39152376,39149789,39141371,39138636,39120223	39152578,39149832,39141436,39138702,39120573	Gene ID= ENSG00000100307.12 TPM= 3.19 Transcript Type= NA
chr22	39132993	39139745	39132993	39139745	-	transcript1712.chr22.nic@CBX7	transcript1712.chr22.nic	protein_coding	39138636,39134401,39132993	39139745,39134752,39134048	Gene ID= ENSG00000100307.12 TPM= 3.19 Transcript Type= NA
chr22	39130772	39152650	39130772	39152650	-	ENST00000216133.9@CBX7	ENST00000216133.9	protein_coding	39152376,39149789,39141371,39138636,39134401,39130772	39152650,39149832,39141436,39138702,39134752,39134048	Gene ID= ENSG00000100307.12 TPM= 133.83 Transcript Type= protein_coding
chr22	39147118	39152674	39147118	39152674	-	ENST00000482294.1@CBX7	ENST00000482294.1	protein_coding	39152376,39147118	39152674,39149832	Gene ID= ENSG00000100307.12 TPM= 2.12 Transcript Type= retained_intron
chr22	39139790	39141757	39139790	39141757	+	transcript1716.chr22.nnic@NA	transcript1716.chr22.nnic	NA	39139790	39141757	Gene ID= novel_gene_chr22_1717 TPM= 6.37 Transcript Type= NA
chr22	39145687	39147205	39145687	39147205	+	transcript1718.chr22.nnic@NA	transcript1718.chr22.nnic	NA	39145687	39147205	Gene ID= novel_gene_chr22_1719 TPM= 3.19 Transcript Type= NA
chr22	39240351	39242910	39240351	39242910	-	transcript1725.chr22.nnic@NA	transcript1725.chr22.nnic	NA	39240351	39242910	Gene ID= novel_gene_chr22_1726 TPM= 2.12 Transcript Type= NA
chr22	39244803	39245883	39244803	39245883	-	transcript1723.chr22.nnic@NA	transcript1723.chr22.nnic	NA	39244803	39245883	Gene ID= novel_gene_chr22_1724 TPM= 8.5 Transcript Type= NA
chr22	39312884	39319771	39312884	39319771	-	ENST00000216146.8@RPL3	ENST00000216146.8	protein_coding	39319595,39318400,39317461,39316706,39315369,39314686,39314107,39313634,39313191,39312884	39319771,39318592,39317629,39316841,39315555,39314846,39314208,39313729,39313310,39312984	Gene ID= ENSG00000100316.15 TPM= 779.09 Transcript Type= protein_coding
chr22	39349948	39385575	39349948	39385575	+	transcript1751.chr22.nnic@SYNGR1	transcript1751.chr22.nnic	protein_coding	39349948,39374316,39376052,39381762	39350109,39374553,39376197,39385575	Gene ID= ENSG00000100321.14 TPM= 21.24 Transcript Type= NA
chr22	39349925	39378389	39349925	39378389	+	ENST00000318801.8@SYNGR1	ENST00000318801.8	protein_coding	39349925,39374316,39376052,39377598	39350109,39374553,39376197,39378389	Gene ID= ENSG00000100321.14 TPM= 21.24 Transcript Type= protein_coding
chr22	39376938	39377906	39376938	39377906	+	transcript1758.chr22.nnic@NA	transcript1758.chr22.nnic	NA	39376938	39377906	Gene ID= novel_gene_chr22_1759 TPM= 2.12 Transcript Type= NA
chr22	39399741	39431882	39399741	39431882	+	ENST00000216160.10@TAB1	ENST00000216160.10	protein_coding	39399741,39415006,39415500,39416791,39417711,39418732,39419519,39421827,39426703,39428021,39430015	39399835,39415142,39415653,39416877,39417849,39418845,39419630,39421971,39426925,39428183,39431882	Gene ID= ENSG00000100324.13 TPM= 14.87 Transcript Type= protein_coding
chr22	39414914	39417632	39414914	39417632	+	transcript1766.chr22.nnic@NA	transcript1766.chr22.nnic	NA	39414914	39417632	Gene ID= novel_gene_chr22_1767 TPM= 2.12 Transcript Type= NA
chr22	39423548	39424413	39423548	39424413	-	transcript1768.chr22.nnic@NA	transcript1768.chr22.nnic	NA	39423548	39424413	Gene ID= novel_gene_chr22_1769 TPM= 3.19 Transcript Type= NA
chr22	39457344	39492194	39457344	39492194	+	ENST00000341184.6@MGAT3	ENST00000341184.6	protein_coding	39457344,39487347	39457557,39492194	Gene ID= ENSG00000128268.11 TPM= 39.3 Transcript Type= protein_coding
chr22	39462155	39463764	39462155	39463764	+	transcript1771.chr22.nnic@NA	transcript1771.chr22.nnic	NA	39462155	39463764	Gene ID= novel_gene_chr22_1772 TPM= 2.12 Transcript Type= NA
chr22	39502302	39516380	39502302	39516380	+	ENST00000433117.6@MIEF1	ENST00000433117.6	protein_coding	39502302,39504203,39511288,39511849,39512318,39513517	39502437,39504534,39511438,39512026,39512494,39516380	Gene ID= ENSG00000100335.13 TPM= 3.19 Transcript Type= nonsense_mediated_decay
chr22	39502353	39518132	39502353	39518132	+	ENST00000325301.6@MIEF1	ENST00000325301.6	protein_coding	39502353,39504203,39511288,39511849,39512232,39513517	39502437,39504534,39511438,39512026,39512494,39518132	Gene ID= ENSG00000100335.13 TPM= 6.37 Transcript Type= protein_coding
chr22	39519695	39522683	39519695	39522683	+	ENST00000404241.6@ATF4	ENST00000404241.6	protein_coding	39519695,39520178,39521354,39521773	39519801,39520751,39521671,39522683	Gene ID= ENSG00000128272.14 TPM= 80.9 Transcript Type= protein_coding
chr22	39520564	39522683	39520564	39522683	+	ENST00000337304.2@ATF4	ENST00000337304.2	protein_coding	39520564,39521773	39521671,39522683	Gene ID= ENSG00000128272.14 TPM= 49.04 Transcript Type= protein_coding
chr22	39520564	39522685	39520564	39522685	+	ENST00000396680.2@ATF4	ENST00000396680.2	protein_coding	39520564,39521354,39521773	39520751,39521671,39522685	Gene ID= ENSG00000128272.14 TPM= 53.82 Transcript Type= protein_coding
chr22	39529093	39532855	39529093	39532855	-	ENST00000334678.7@RPS19BP1	ENST00000334678.7	protein_coding	39532687,39532395,39529820,39529093	39532855,39532523,39529917,39529623	Gene ID= ENSG00000187051.8 TPM= 76.48 Transcript Type= protein_coding
chr22	40177925	40323556	40177925	40323556	+	transcript1792.chr22.nic@TNRC6B	transcript1792.chr22.nic	protein_coding	40177925,40246015,40251179,40261832,40264688,40270122,40273425,40277077,40277999,40279995,40285645,40300455,40300910,40301150,40308512,40310817,40312505,40312902,40315283,40315942,40321090,40322854	40178140,40246102,40251200,40262173,40267036,40270280,40273600,40277151,40278044,40280143,40285770,40300586,40301005,40301333,40308649,40310993,40312651,40312997,40315507,40316012,40321229,40323556	Gene ID= ENSG00000100354.20 TPM= 6.37 Transcript Type= NA
chr22	40044763	40246054	40044763	40246054	+	transcript1794.chr22.nic@TNRC6B	transcript1794.chr22.nic	protein_coding	40044763,40117055,40125772,40156115,40246015	40044998,40117128,40125862,40156182,40246054	Gene ID= ENSG00000100354.20 TPM= 2.12 Transcript Type= NA
chr22	40177925	40335807	40177925	40335807	+	ENST00000454349.6@TNRC6B	ENST00000454349.6	protein_coding	40177925,40246015,40251179,40261832,40264688,40270122,40273425,40277077,40277999,40279995,40281119,40285645,40300455,40300910,40301150,40308512,40310817,40312505,40312902,40315283,40315942,40321090,40322854	40178140,40246102,40251200,40262173,40267036,40270280,40273600,40277151,40278044,40280143,40281289,40285770,40300586,40301005,40301333,40308649,40310993,40312651,40312997,40315507,40316012,40321229,40335807	Gene ID= ENSG00000100354.20 TPM= 3.19 Transcript Type= protein_coding
chr22	40177925	40246362	40177925	40246362	+	ENST00000489500.1@TNRC6B	ENST00000489500.1	protein_coding	40177925,40246015	40178140,40246362	Gene ID= ENSG00000100354.20 TPM= 3.19 Transcript Type= retained_intron
chr22	40331752	40332683	40331752	40332683	+	transcript1798.chr22.nnic@NA	transcript1798.chr22.nnic	NA	40331752	40332683	Gene ID= novel_gene_chr22_1799 TPM= 4.25 Transcript Type= NA
chr22	40346483	40366556	40346483	40366556	+	transcript1845.chr22.nic@ADSL	transcript1845.chr22.nic	protein_coding	40346483,40349832,40354248,40358864,40359260,40360402,40361273,40361488,40362981,40364276,40364880,40366436	40346711,40350035,40354327,40359035,40359306,40360492,40361342,40361635,40363071,40364365,40365056,40366556	Gene ID= ENSG00000239900.12 TPM= 3.19 Transcript Type= NA
chr22	40370572	40410285	40370572	40410285	+	transcript1806.chr22.nnic@SGSM3	transcript1806.chr22.nnic	protein_coding	40370572,40400696,40401593,40402139,40404247,40404557,40405141,40405649,40406078,40406438,40407017,40407201,40407413,40407789,40408071,40408277,40408627,40408794,40408933,40409250,40409465,40410132	40370688,40400813,40401675,40402205,40404455,40404664,40405284,40405844,40406223,40406662,40407071,40407328,40407568,40407843,40408120,40408429,40408697,40408842,40409018,40409372,40409525,40410285	Gene ID= ENSG00000100359.20 TPM= 11.15 Transcript Type= NA
chr22	40370623	40410108	40370623	40410108	+	transcript1807.chr22.nic@SGSM3	transcript1807.chr22.nic	protein_coding	40370623,40400696,40401593,40402139,40404247,40404557,40405141,40405649,40406078,40406438,40407017,40407201,40407413,40407789,40408071,40408277,40408627,40408794,40408933,40409340,40409465,40409682	40370688,40400813,40401675,40402205,40404455,40404664,40405284,40405844,40406223,40406662,40407071,40407328,40407568,40407843,40408120,40408429,40408697,40408842,40409018,40409372,40409525,40410108	Gene ID= ENSG00000100359.20 TPM= 5.31 Transcript Type= NA
chr22	40370572	40410108	40370572	40410108	+	transcript1813.chr22.nic@SGSM3	transcript1813.chr22.nic	protein_coding	40370572,40400696,40401593,40402139,40404247,40404557,40405141,40405649,40406078,40406438,40407017,40407201,40407413,40407789,40408071,40408277,40408627,40408794,40408933,40409465,40409682	40370688,40400813,40401675,40402205,40404455,40404664,40405284,40405844,40406223,40406662,40407071,40407328,40407568,40407843,40408120,40408429,40408697,40408842,40409372,40409525,40410108	Gene ID= ENSG00000100359.20 TPM= 3.19 Transcript Type= NA
chr22	40370572	40410108	40370572	40410108	+	transcript1819.chr22.nic@SGSM3	transcript1819.chr22.nic	protein_coding	40370572,40400696,40402139,40404247,40404557,40405141,40405649,40406078,40406438,40407017,40407201,40407413,40407789,40408071,40408277,40408627,40408794,40408933,40409250,40409465,40409682	40370688,40400813,40402205,40404455,40404664,40405284,40405844,40406223,40406662,40407071,40407328,40407568,40407843,40408120,40408429,40408697,40408842,40409018,40409372,40409525,40410108	Gene ID= ENSG00000100359.20 TPM= 22.31 Transcript Type= NA
chr22	40370572	40410285	40370572	40410285	+	transcript1820.chr22.nnic@SGSM3	transcript1820.chr22.nnic	protein_coding	40370572,40400696,40402139,40404247,40404557,40405141,40405649,40406078,40406438,40407017,40407201,40407413,40407789,40408071,40408277,40408627,40408794,40408933,40409250,40409465,40410132	40370688,40400813,40402205,40404455,40404664,40405284,40405844,40406223,40406662,40407071,40407328,40407568,40407843,40408120,40408429,40408697,40408842,40409018,40409372,40409525,40410285	Gene ID= ENSG00000100359.20 TPM= 4.78 Transcript Type= NA
chr22	40370611	40410289	40370611	40410289	+	ENST00000248929.13@SGSM3	ENST00000248929.13	protein_coding	40370611,40400696,40401593,40402139,40404247,40404557,40405141,40405649,40406078,40406438,40407017,40407201,40407413,40407789,40408071,40408277,40408627,40408794,40408933,40409250,40409465,40409682	40370688,40400813,40401675,40402205,40404455,40404664,40405284,40405844,40406223,40406662,40407071,40407328,40407568,40407843,40408120,40408429,40408697,40408842,40409018,40409372,40409525,40410289	Gene ID= ENSG00000100359.20 TPM= 3.19 Transcript Type= protein_coding
chr22	40468110	40471245	40468110	40471245	+	transcript1857.chr22.nnic@NA	transcript1857.chr22.nnic	NA	40468110	40471245	Gene ID= novel_gene_chr22_1858 TPM= 2.12 Transcript Type= NA
chr22	40769630	40819382	40769630	40819382	-	ENST00000435456.6@SLC25A17	ENST00000435456.6	protein_coding	40819195,40799023,40794514,40792525,40779009,40777228,40777040,40773937,40769630	40819382,40799083,40794580,40792676,40779125,40777373,40777135,40774019,40770981	Gene ID= ENSG00000100372.14 TPM= 1.06 Transcript Type= protein_coding
chr22	40769630	40819399	40769630	40819399	-	ENST00000544408.5@SLC25A17	ENST00000544408.5	protein_coding	40819195,40799023,40779009,40777228,40777040,40773937,40769630	40819399,40799083,40779125,40777373,40777135,40774019,40770981	Gene ID= ENSG00000100372.14 TPM= 1.06 Transcript Type= protein_coding
chr22	40770088	40819360	40770088	40819360	-	transcript1863.chr22.nnic@SLC25A17	transcript1863.chr22.nnic	protein_coding	40819195,40779009,40777228,40777040,40773937,40770088	40819360,40779125,40777373,40777135,40774019,40770981	Gene ID= ENSG00000100372.14 TPM= 2.12 Transcript Type= NA
chr22	40824535	40857022	40824535	40857022	-	ENST00000216218.7@ST13	ENST00000216218.7	protein_coding	40856431,40850823,40848294,40844839,40840626,40835803,40835560,40832569,40830840,40829626,40827096,40824535	40857022,40850880,40848369,40844909,40840692,40835887,40835670,40832671,40830956,40829674,40827229,40826666	Gene ID= ENSG00000100380.13 TPM= 44.61 Transcript Type= protein_coding
chr22	40857066	40927584	40857066	40927584	+	transcript1881.chr22.nnic@XPNPEP3	transcript1881.chr22.nnic	protein_coding	40857066,40868999,40881770,40886313,40914239,40922333,40924362,40926269	40857245,40869115,40882177,40886515,40914324,40922513,40924482,40927584	Gene ID= ENSG00000196236.12 TPM= 2.12 Transcript Type= NA
chr22	40951808	40972662	40951808	40972662	+	transcript1885.chr22.nnic@RBX1	transcript1885.chr22.nnic	protein_coding	40951808,40953555,40964047,40967799,40972476	40952026,40953633,40964117,40967884,40972662	Gene ID= ENSG00000100387.8 TPM= 8.58 Transcript Type= NA
chr22	40951379	40972662	40951379	40972662	+	transcript1887.chr22.nnic@RBX1	transcript1887.chr22.nnic	protein_coding	40951379,40964047,40967799,40972476	40951476,40964117,40967884,40972662	Gene ID= ENSG00000100387.8 TPM= 14.16 Transcript Type= NA
chr22	41205205	41231271	41205205	41231271	+	ENST00000216237.9@L3MBTL2	ENST00000216237.9	protein_coding	41205205,41209696,41213893,41216139,41217123,41219419,41220734,41221199,41224020,41224725,41224967,41225794,41226662,41227089,41227804,41229540,41230139	41205386,41209933,41214026,41216262,41217202,41219536,41220868,41221287,41224251,41224801,41225071,41225941,41226744,41227323,41227869,41229656,41231271	Gene ID= ENSG00000100395.14 TPM= 32.93 Transcript Type= protein_coding
chr22	41205321	41231270	41205321	41231270	+	ENST00000479978.5@L3MBTL2	ENST00000479978.5	protein_coding	41205321,41209696,41213893,41216139,41217123,41220734,41221199,41224020,41224725,41224967,41225794,41226662,41227089,41229540,41230139	41205386,41209933,41214026,41216262,41219536,41220868,41221287,41224251,41224801,41225071,41225941,41226744,41227869,41229656,41231270	Gene ID= ENSG00000100395.14 TPM= 3.19 Transcript Type= retained_intron
chr22	41229513	41240934	41229513	41240934	-	ENST00000216241.13@CHADL	ENST00000216241.13	protein_coding	41240874,41239443,41237176,41236484,41235145,41229513	41240934,41239620,41238885,41236650,41235343,41229730	Gene ID= ENSG00000100399.15 TPM= 15.93 Transcript Type= protein_coding
chr22	41208481	41238059	41208481	41238059	-	transcript1908.chr22.nnic@CHADL	transcript1908.chr22.nnic	protein_coding	41237176,41235145,41208481	41238059,41235343,41209951	Gene ID= ENSG00000100399.15 TPM= 3.19 Transcript Type= NA
chr22	41243471	41245856	41243471	41245856	-	transcript1923.chr22.nnic@NA	transcript1923.chr22.nnic	NA	41243471	41245856	Gene ID= novel_gene_chr22_1924 TPM= 2.12 Transcript Type= NA
chr22	41245611	41286002	41245611	41286002	-	transcript1915.chr22.nnic@RANGAP1	transcript1915.chr22.nnic	protein_coding	41285363,41280933,41274600,41268097,41264664,41261446,41257948,41256711,41256191,41256021,41254308,41252872,41251007,41249729,41249330,41245611	41286002,41281082,41274727,41268156,41264843,41261580,41258106,41256824,41256290,41256105,41254494,41252991,41251109,41249817,41249451,41246672	Gene ID= ENSG00000100401.19 TPM= 6.72 Transcript Type= NA
chr22	41245611	41286262	41245611	41286262	-	transcript1922.chr22.nnic@RANGAP1	transcript1922.chr22.nnic	protein_coding	41285986,41280933,41274600,41268097,41261446,41257948,41256711,41256191,41256021,41254308,41252872,41251007,41249729,41249330,41245611	41286262,41281082,41274727,41268156,41261580,41258106,41256824,41256290,41256105,41254494,41252991,41251109,41249817,41249451,41246672	Gene ID= ENSG00000100401.19 TPM= 4.6 Transcript Type= NA
chr22	41245611	41286251	41245611	41286251	-	ENST00000356244.7@RANGAP1	ENST00000356244.7	protein_coding	41285986,41280933,41274600,41268097,41264664,41261446,41257948,41256711,41256191,41256021,41254308,41252872,41251007,41249729,41249330,41245611	41286251,41281082,41274727,41268156,41264843,41261580,41258106,41256824,41256290,41256105,41254494,41252991,41251109,41249817,41249451,41246672	Gene ID= ENSG00000100401.19 TPM= 26.9 Transcript Type= protein_coding
chr22	41301522	41360147	41301522	41360147	+	ENST00000352645.4@ZC3H7B	ENST00000352645.4	protein_coding	41301522,41320655,41325564,41325721,41327206,41330023,41332171,41338313,41339001,41339816,41341088,41342529,41343415,41346003,41348067,41349120,41351561,41355469,41355757,41355954,41356343,41356645,41357177	41301772,41320713,41325597,41325918,41327364,41330103,41332227,41338355,41339191,41340137,41341146,41342628,41343576,41346208,41348167,41349301,41351646,41355602,41355862,41356062,41356476,41356808,41360147	Gene ID= ENSG00000100403.11 TPM= 19.12 Transcript Type= protein_coding
chr22	41381929	41399326	41381929	41399326	+	ENST00000266304.8@TEF	ENST00000266304.8	protein_coding	41381929,41387351,41394096,41395745	41382201,41387668,41394316,41399326	Gene ID= ENSG00000167074.14 TPM= 41.42 Transcript Type= protein_coding
chr22	41433492	41447023	41433492	41447023	-	ENST00000327492.3@TOB2	ENST00000327492.3	protein_coding	41446379,41433492	41447023,41437407	Gene ID= ENSG00000183864.4 TPM= 72.23 Transcript Type= protein_coding
chr22	41459717	41468725	41459717	41468725	-	ENST00000216252.3@PHF5A	ENST00000216252.3	protein_coding	41468602,41468124,41467448,41459717	41468725,41468147,41467614,41460487	Gene ID= ENSG00000100410.7 TPM= 4.25 Transcript Type= protein_coding
chr22	41469125	41528989	41469125	41528989	+	ENST00000216254.8@ACO2	ENST00000216254.8	protein_coding	41469125,41499726,41507791,41511876,41515377,41515767,41517527,41518481,41520171,41522830,41523205,41523830,41524846,41525193,41526262,41527288,41527901,41528479	41469182,41499862,41508049,41511968,41515535,41515917,41517631,41518572,41520276,41522987,41523278,41523941,41524968,41525348,41526453,41527420,41528022,41528989	Gene ID= ENSG00000100412.15 TPM= 588.44 Transcript Type= protein_coding
chr22	41525804	41544489	41525804	41544489	-	ENST00000396504.6@POLR3H	ENST00000396504.6	protein_coding	41544428,41543991,41540699,41532659,41532094,41530687,41525804	41544489,41544121,41540795,41532745,41532157,41530888,41529336	Gene ID= ENSG00000100413.16 TPM= 6.37 Transcript Type= protein_coding
chr22	41528842	41544462	41528842	41544462	-	ENST00000337566.9@POLR3H	ENST00000337566.9	protein_coding	41543991,41540699,41532094,41530687,41528842	41544462,41540795,41532157,41530888,41529336	Gene ID= ENSG00000100413.16 TPM= 2.12 Transcript Type= protein_coding
chr22	41528843	41544455	41528843	41544455	-	ENST00000431534.5@POLR3H	ENST00000431534.5	protein_coding	41543991,41540699,41532604,41532094,41530687,41528843	41544455,41540795,41532745,41532157,41530888,41529336	Gene ID= ENSG00000100413.16 TPM= 2.12 Transcript Type= nonsense_mediated_decay
chr22	41528779	41533859	41528779	41533859	+	transcript1968.chr22.nnic@NA	transcript1968.chr22.nnic	NA	41528779	41533859	Gene ID= novel_gene_chr22_1969 TPM= 20.18 Transcript Type= NA
chr22	41551709	41560991	41551709	41560991	-	transcript1982.chr22.nnic@NA	transcript1982.chr22.nnic	NA	41560720,41551709	41560991,41551888	Gene ID= novel_gene_chr22_1983 TPM= 13.81 Transcript Type= NA
chr22	41560762	41562419	41560762	41562419	+	transcript1986.chr22.nnic@NA	transcript1986.chr22.nnic	NA	41560762	41562419	Gene ID= novel_gene_chr22_1987 TPM= 2.12 Transcript Type= NA
chr22	41560763	41576666	41560763	41576666	+	ENST00000306149.11@CSDC2	ENST00000306149.11	protein_coding	41560763,41571843,41573655,41574733	41561183,41572141,41573777,41576666	Gene ID= ENSG00000172346.14 TPM= 315.46 Transcript Type= protein_coding
chr22	41575932	41577681	41575932	41577681	+	transcript1988.chr22.nnic@NA	transcript1988.chr22.nnic	NA	41575932	41577681	Gene ID= novel_gene_chr22_1989 TPM= 2.66 Transcript Type= NA
chr22	41576894	41589890	41576894	41589890	-	ENST00000216259.7@PMM1	ENST00000216259.7	protein_coding	41589719,41586076,41584527,41584281,41583959,41578806,41577808,41576894	41589890,41586193,41584603,41584372,41584058,41578881,41577923,41577440	Gene ID= ENSG00000100417.11 TPM= 32.4 Transcript Type= protein_coding
chr22	41598028	41621080	41598028	41621080	-	transcript1994.chr22.nnic@DESI1	transcript1994.chr22.nnic	protein_coding	41620752,41607840,41607262,41604044,41603259,41600127,41598028	41621080,41607861,41607331,41604153,41603381,41601190,41599651	Gene ID= ENSG00000100418.7 TPM= 6.9 Transcript Type= NA
chr22	41598028	41621096	41598028	41621096	-	ENST00000263256.6@DESI1	ENST00000263256.6	protein_coding	41620752,41607840,41607262,41604044,41603259,41598028	41621096,41607861,41607331,41604153,41603381,41601190	Gene ID= ENSG00000100418.7 TPM= 22.84 Transcript Type= protein_coding
chr22	41601674	41606801	41601674	41606801	-	transcript1997.chr22.nnic@DESI1	transcript1997.chr22.nnic	protein_coding	41606649,41604044,41603196,41601674	41606801,41604153,41603381,41602892	Gene ID= ENSG00000100418.7 TPM= 2.12 Transcript Type= NA
chr22	41604913	41606369	41604913	41606369	+	transcript2000.chr22.nnic@NA	transcript2000.chr22.nnic	NA	41604913	41606369	Gene ID= novel_gene_chr22_2001 TPM= 3.19 Transcript Type= NA
chr22	41621119	41664039	41621119	41664039	+	ENST00000360079.7@XRCC6	ENST00000360079.7	protein_coding	41621119,41621990,41628118,41636113,41636516,41637608,41646896,41650723,41653529,41656903,41658252,41661331,41663622	41621345,41622086,41628230,41636251,41636770,41637791,41647082,41650891,41653690,41657032,41658352,41661444,41664039	Gene ID= ENSG00000196419.12 TPM= 422.03 Transcript Type= protein_coding
chr22	41621350	41664039	41621350	41664039	+	ENST00000359308.8@XRCC6	ENST00000359308.8	protein_coding	41621350,41628118,41636113,41636516,41637608,41646896,41650723,41653529,41656903,41658252,41661331,41663622	41622086,41628230,41636251,41636770,41637791,41647082,41650891,41653690,41657032,41658352,41661444,41664039	Gene ID= ENSG00000196419.12 TPM= 20.53 Transcript Type= protein_coding
chr22	41639669	41642469	41639669	41642469	-	transcript2002.chr22.nnic@NA	transcript2002.chr22.nnic	NA	41639669	41642469	Gene ID= novel_gene_chr22_2003 TPM= 2.12 Transcript Type= NA
chr22	41673930	41688909	41673930	41688909	-	ENST00000355257.7@SNU13	ENST00000355257.7	protein_coding	41688794,41680244,41673930	41688909,41680364,41675195	Gene ID= ENSG00000100138.13 TPM= 66.92 Transcript Type= protein_coding
chr22	41687742	41688847	41687742	41688847	-	ENST00000469522.1@SNU13	ENST00000469522.1	protein_coding	41688794,41687742	41688847,41688327	Gene ID= ENSG00000100138.13 TPM= 2.12 Transcript Type= retained_intron
chr22	41688927	41698135	41688927	41698135	+	transcript2006.chr22.nnic@C22orf46	transcript2006.chr22.nnic	protein_coding	41688927,41690784,41693463,41693938	41689304,41690843,41693851,41698135	Gene ID= ENSG00000184208.10 TPM= 19.12 Transcript Type= NA
chr22	41833105	41907308	41833105	41907308	+	ENST00000361204.8@SREBF2	ENST00000361204.8	protein_coding	41833105,41866831,41868611,41870889,41873798,41875337,41875543,41877229,41877942,41880716,41884842,41893117,41894820,41897052,41898649,41900330,41902970,41904863,41905440	41833358,41867280,41868792,41871035,41874019,41875451,41875724,41877421,41878123,41880992,41885011,41893285,41894937,41897161,41898781,41900498,41903155,41904974,41907308	Gene ID= ENSG00000198911.11 TPM= 193.84 Transcript Type= protein_coding
chr22	42058354	42070830	42058354	42070830	-	ENST00000396398.7@NAGA	ENST00000396398.7	protein_coding	42070282,42068439,42067765,42067113,42066710,42065738,42062827,42060924,42058354	42070830,42068574,42067936,42067290,42066804,42065899,42063024,42061067,42060413	Gene ID= ENSG00000198951.11 TPM= 11.68 Transcript Type= protein_coding
chr22	42059802	42070842	42059802	42070842	-	ENST00000402937.1@NAGA	ENST00000402937.1	protein_coding	42070763,42070282,42068439,42067765,42067113,42066710,42065738,42062827,42060924,42059802	42070842,42070373,42068574,42067936,42067290,42066804,42065899,42063024,42061067,42060413	Gene ID= ENSG00000198951.11 TPM= 3.19 Transcript Type= protein_coding
chr22	42074251	42079441	42074251	42079441	+	ENST00000321753.7@FAM109B	ENST00000321753.7	protein_coding	42074251,42075571,42077280	42074341,42075652,42079441	Gene ID= ENSG00000177096.8 TPM= 15.93 Transcript Type= protein_coding
chr22	42079691	42083353	42079691	42083353	+	ENST00000422252.1@SMDT1	ENST00000422252.1	protein_coding	42079691,42081925,42083119	42079905,42082065,42083353	Gene ID= ENSG00000183172.8 TPM= 6.9 Transcript Type= nonsense_mediated_decay
chr22	42079695	42084284	42079695	42084284	+	ENST00000331479.3@SMDT1	ENST00000331479.3	protein_coding	42079695,42081925,42083119	42079954,42082065,42084284	Gene ID= ENSG00000183172.8 TPM= 3.72 Transcript Type= protein_coding
chr22	42085525	42090955	42085525	42090955	-	ENST00000498737.6@NDUFA6	ENST00000498737.6	protein_coding	42090606,42087060,42085525	42090955,42087175,42086314	Gene ID= ENSG00000184983.9 TPM= 255.98 Transcript Type= protein_coding
chr22	42160013	42215442	42160013	42215442	-	ENST00000359486.7@TCF20	ENST00000359486.7	protein_coding	42209651,42179609,42169847,42168609,42160013	42215442,42179702,42169896,42168736,42161358	Gene ID= ENSG00000100207.18 TPM= 4.25 Transcript Type= protein_coding
chr22	42500590	42512560	42500590	42512560	+	ENST00000359906.6@SERHL	ENST00000359906.6	processed_transcript	42500590,42501625,42501919,42502351,42502749,42503199,42505033,42509028,42510631,42511816,42512118	42500692,42501774,42502032,42502392,42502768,42503273,42505142,42509110,42510724,42511927,42512560	Gene ID= ENSG00000172250.14 TPM= 2.12 Transcript Type= antisense_RNA
chr22	42508340	42510054	42508340	42510054	-	transcript2062.chr22.nnic@NA	transcript2062.chr22.nnic	NA	42508340	42510054	Gene ID= novel_gene_chr22_2063 TPM= 2.12 Transcript Type= NA
chr22	42509968	42519802	42509968	42519802	-	ENST00000323013.6@RRP7A	ENST00000323013.6	protein_coding	42519714,42518005,42516011,42515151,42514682,42514106,42509968	42519802,42518147,42516136,42515268,42514779,42514304,42512995	Gene ID= ENSG00000189306.10 TPM= 6.37 Transcript Type= protein_coding
chr22	42553919	42574382	42553919	42574382	+	ENST00000327678.9@SERHL2	ENST00000327678.9	protein_coding	42553919,42554938,42555232,42555664,42556064,42556514,42558348,42560186,42566304,42571121,42572436,42573936	42554042,42555087,42555345,42555705,42556083,42556588,42558457,42560265,42566338,42571203,42572529,42574382	Gene ID= ENSG00000183569.17 TPM= 8.5 Transcript Type= protein_coding
chr22	42555223	42582038	42555223	42582038	-	ENST00000357802.6@RRP7BP	ENST00000357802.6	transcribed_unprocessed_pseudogene	42581929,42580217,42577844,42576981,42576512,42575931,42574680,42555223	42582038,42580359,42577962,42577098,42576609,42576126,42574818,42556674	Gene ID= ENSG00000182841.12 TPM= 23.37 Transcript Type= processed_transcript
chr22	42583721	42614962	42583721	42614962	-	ENST00000252115.9@POLDIP3	ENST00000252115.9	protein_coding	42614799,42602770,42601970,42599698,42596186,42595537,42591955,42587506,42583721	42614962,42603160,42602056,42599793,42596365,42595614,42592084,42587572,42585968	Gene ID= ENSG00000100227.17 TPM= 61.61 Transcript Type= protein_coding
chr22	42583721	42614931	42583721	42614931	-	ENST00000348657.6@POLDIP3	ENST00000348657.6	protein_coding	42614799,42602770,42599698,42596186,42595537,42591955,42587506,42583721	42614931,42603160,42599793,42596365,42595614,42592084,42587572,42585968	Gene ID= ENSG00000100227.17 TPM= 21.24 Transcript Type= protein_coding
chr22	42618808	42649568	42618808	42649568	-	ENST00000352397.9@CYB5R3	ENST00000352397.9	protein_coding	42649295,42636715,42631378,42630882,42628152,42627605,42627304,42623789,42618808	42649568,42636846,42631450,42630988,42628281,42627688,42627389,42623888,42619945	Gene ID= ENSG00000100243.20 TPM= 906.03 Transcript Type= protein_coding
chr22	42618808	42647156	42618808	42647156	-	transcript2100.chr22.nic@CYB5R3	transcript2100.chr22.nic	protein_coding	42646886,42636715,42631378,42630882,42628152,42627605,42627304,42623789,42618808	42647156,42636846,42631450,42630988,42628281,42627688,42627389,42623888,42619945	Gene ID= ENSG00000100243.20 TPM= 91.36 Transcript Type= NA
chr22	42618842	42646977	42618842	42646977	-	ENST00000407623.7@CYB5R3	ENST00000407623.7	protein_coding	42646641,42636715,42631378,42630882,42628152,42627605,42627304,42623789,42618842	42646977,42636846,42631450,42630988,42628281,42627688,42627389,42623888,42619945	Gene ID= ENSG00000100243.20 TPM= 17.71 Transcript Type= protein_coding
chr22	42618853	42636890	42618853	42636890	-	ENST00000407332.5@CYB5R3	ENST00000407332.5	protein_coding	42636715,42631378,42630882,42628152,42627605,42627304,42623789,42618853	42636890,42631450,42630988,42628281,42627688,42627389,42623888,42619945	Gene ID= ENSG00000100243.20 TPM= 2.71 Transcript Type= protein_coding
chr22	42682970	42685348	42682970	42685348	-	transcript2140.chr22.nnic@NA	transcript2140.chr22.nnic	NA	42682970	42685348	Gene ID= novel_gene_chr22_2141 TPM= 2.12 Transcript Type= NA
chr22	42692121	42720769	42692121	42720769	-	transcript2120.chr22.nnic@A4GALT	transcript2120.chr22.nnic	protein_coding	42720421,42695491,42692121	42720769,42695631,42693997	Gene ID= ENSG00000128274.15 TPM= 27.27 Transcript Type= NA
chr22	42692121	42720923	42692121	42720923	-	transcript2121.chr22.nnic@A4GALT	transcript2121.chr22.nnic	protein_coding	42720797,42695491,42692121	42720923,42695631,42693997	Gene ID= ENSG00000128274.15 TPM= 67.63 Transcript Type= NA
chr22	42692122	42720870	42692122	42720870	-	transcript2122.chr22.nnic@A4GALT	transcript2122.chr22.nnic	protein_coding	42720797,42695575,42692122	42720870,42695631,42693997	Gene ID= ENSG00000128274.15 TPM= 29.03 Transcript Type= NA
chr22	42692117	42720923	42692117	42720923	-	transcript2129.chr22.nnic@A4GALT	transcript2129.chr22.nnic	protein_coding	42720797,42692117	42720923,42695631	Gene ID= ENSG00000128274.15 TPM= 9.56 Transcript Type= NA
chr22	42692121	42720879	42692121	42720879	-	transcript2131.chr22.nnic@A4GALT	transcript2131.chr22.nnic	protein_coding	42720797,42692121	42720879,42693997	Gene ID= ENSG00000128274.15 TPM= 23.72 Transcript Type= NA
chr22	42692121	42695633	42692121	42695633	-	ENST00000249005.2@A4GALT	ENST00000249005.2	protein_coding	42695491,42692121	42695633,42693997	Gene ID= ENSG00000128274.15 TPM= 28.33 Transcript Type= protein_coding
chr22	42692122	42695633	42692122	42695633	-	ENST00000381278.3@A4GALT	ENST00000381278.3	protein_coding	42695575,42692122	42695633,42693997	Gene ID= ENSG00000128274.15 TPM= 27.97 Transcript Type= protein_coding
chr22	42699097	42700613	42699097	42700613	-	transcript2138.chr22.nnic@NA	transcript2138.chr22.nnic	NA	42699097	42700613	Gene ID= novel_gene_chr22_2139 TPM= 3.19 Transcript Type= NA
chr22	42712679	42714304	42712679	42714304	+	transcript2136.chr22.nnic@NA	transcript2136.chr22.nnic	NA	42712679	42714304	Gene ID= novel_gene_chr22_2137 TPM= 10.62 Transcript Type= NA
chr22	42796502	42857402	42796502	42857402	-	ENST00000263245.9@ARFGAP3	ENST00000263245.9	protein_coding	42857114,42847514,42840944,42835362,42834242,42831549,42826940,42823656,42822270,42817729,42817142,42810813,42808767,42807073,42799039,42796502	42857402,42847632,42841016,42835493,42834325,42831636,42826999,42823702,42822409,42817857,42817264,42810944,42808890,42807163,42799160,42797605	Gene ID= ENSG00000242247.10 TPM= 63.73 Transcript Type= protein_coding
chr22	42796502	42857279	42796502	42857279	-	transcript2149.chr22.nic@ARFGAP3	transcript2149.chr22.nic	protein_coding	42857114,42847514,42840944,42835362,42834242,42831549,42826940,42823656,42822270,42817729,42817142,42808767,42807073,42799039,42796502	42857279,42847632,42841016,42835493,42834325,42831636,42826999,42823702,42822409,42817857,42817264,42808890,42807163,42799160,42797605	Gene ID= ENSG00000242247.10 TPM= 10.62 Transcript Type= NA
chr22	42830129	42857279	42830129	42857279	-	transcript2153.chr22.nic@ARFGAP3	transcript2153.chr22.nic	protein_coding	42857114,42847514,42840944,42835362,42834242,42830129	42857279,42847632,42841016,42835493,42834325,42831636	Gene ID= ENSG00000242247.10 TPM= 2.12 Transcript Type= NA
chr22	42869771	42959901	42869771	42959901	-	transcript2159.chr22.nic@PACSIN2	transcript2159.chr22.nic	protein_coding	42959799,42912021,42893457,42890947,42888643,42884386,42882184,42879048,42876888,42876137,42869771	42959901,42912157,42893613,42891182,42888798,42884561,42882304,42879169,42877010,42876333,42871469	Gene ID= ENSG00000100266.18 TPM= 7.44 Transcript Type= NA
chr22	42869771	43015150	42869771	43015150	-	transcript2165.chr22.nnic@PACSIN2	transcript2165.chr22.nnic	protein_coding	43015021,42893457,42890947,42888643,42884386,42882184,42879048,42876888,42876137,42869771	43015150,42893613,42891182,42888798,42884561,42882304,42879169,42877010,42876333,42871469	Gene ID= ENSG00000100266.18 TPM= 6.37 Transcript Type= NA
chr22	42869771	42881582	42869771	42881582	-	transcript2168.chr22.nic@PACSIN2	transcript2168.chr22.nic	protein_coding	42879048,42876888,42876137,42869771	42881582,42877010,42876333,42871469	Gene ID= ENSG00000100266.18 TPM= 5.31 Transcript Type= NA
chr22	42869771	43015145	42869771	43015145	-	ENST00000263246.7@PACSIN2	ENST00000263246.7	protein_coding	43015021,42912021,42893457,42890947,42888643,42884386,42882184,42879048,42876888,42876137,42869771	43015145,42912157,42893613,42891182,42888798,42884561,42882304,42879169,42877010,42876333,42871469	Gene ID= ENSG00000100266.18 TPM= 40.36 Transcript Type= protein_coding
chr22	43039644	43089428	43039644	43089428	-	ENST00000266254.11@TTLL1	ENST00000266254.11	protein_coding	43089277,43079902,43075474,43069636,43068410,43064190,43063813,43059384,43051801,43046410,43039644	43089428,43079986,43075590,43069844,43068590,43064324,43063921,43059527,43051887,43046573,43039905	Gene ID= ENSG00000100271.16 TPM= 14.87 Transcript Type= protein_coding
chr22	43039669	43089419	43039669	43089419	-	ENST00000440761.1@TTLL1	ENST00000440761.1	protein_coding	43089277,43079902,43075474,43070171,43069636,43068410,43064190,43063813,43059384,43051801,43046410,43039669	43089419,43079986,43075590,43070242,43069844,43068590,43064324,43063921,43059527,43051887,43046573,43039905	Gene ID= ENSG00000100271.16 TPM= 1.06 Transcript Type= nonsense_mediated_decay
chr22	43132880	43143364	43132880	43143364	-	ENST00000327555.5@MCAT	ENST00000327555.5	protein_coding	43142926,43141162,43132880	43143364,43141249,43133486	Gene ID= ENSG00000100294.12 TPM= 10.62 Transcript Type= protein_coding
chr22	43151523	43163242	43151523	43163242	+	transcript2182.chr22.nnic@TSPO	transcript2182.chr22.nnic	protein_coding	43151523,43159210,43161052,43162803	43151604,43159336,43161190,43163242	Gene ID= ENSG00000100300.17 TPM= 20.53 Transcript Type= NA
chr22	43151514	43163242	43151514	43163242	+	ENST00000337554.7@TSPO	ENST00000337554.7	protein_coding	43151514,43159210,43161052,43162803	43151604,43159420,43161190,43163242	Gene ID= ENSG00000100300.17 TPM= 274.39 Transcript Type= protein_coding
chr22	43151547	43163241	43151547	43163241	+	ENST00000583777.5@TSPO	ENST00000583777.5	protein_coding	43151547,43161052,43162803	43151604,43161190,43163241	Gene ID= ENSG00000100300.17 TPM= 16.28 Transcript Type= protein_coding
chr22	43164372	43187152	43164372	43187152	-	transcript2186.chr22.nnic@TTLL12	transcript2186.chr22.nnic	protein_coding	43186893,43182980,43180742,43179841,43179619,43176320,43174499,43174209,43173715,43172403,43171819,43169500,43168774,43168093,43164372	43187152,43183149,43180940,43180000,43179752,43176396,43174615,43174403,43173826,43172554,43171900,43169568,43168912,43168159,43164959	Gene ID= ENSG00000100304.12 TPM= 3.19 Transcript Type= NA
chr22	43166622	43187133	43166622	43187133	-	ENST00000216129.6@TTLL12	ENST00000216129.6	protein_coding	43186893,43182980,43180742,43179841,43179619,43176320,43174499,43174209,43173715,43172403,43171819,43169500,43168774,43166622	43187133,43183149,43180940,43180000,43179752,43176396,43174615,43174403,43173826,43172554,43171900,43169568,43168912,43168159	Gene ID= ENSG00000100304.12 TPM= 36.11 Transcript Type= protein_coding
chr22	43197283	43343388	43197283	43343388	-	ENST00000360835.8@SCUBE1	ENST00000360835.8	protein_coding	43343174,43339104,43319937,43291046,43262720,43258219,43238838,43231753,43229072,43227374,43223097,43222638,43221173,43220450,43218255,43214090,43212425,43210922,43210043,43208072,43207534,43197283	43343388,43339235,43320065,43291180,43262845,43258335,43238954,43231875,43229188,43227496,43223216,43222742,43221289,43220587,43218458,43214251,43212592,43211083,43210240,43208224,43207613,43204149	Gene ID= ENSG00000159307.18 TPM= 1.06 Transcript Type= protein_coding
chr22	43955421	43996533	43955421	43996533	+	ENST00000350028.4@SAMM50	ENST00000350028.4	protein_coding	43955421,43963286,43964452,43968731,43972236,43972871,43973236,43976055,43976750,43977872,43981391,43983933,43989111,43990265,43996338	43955598,43963396,43964553,43968818,43972342,43973001,43973323,43976183,43976821,43977958,43981461,43984000,43989257,43990406,43996533	Gene ID= ENSG00000100347.14 TPM= 200.75 Transcript Type= protein_coding
chr22	44492572	44498298	44492572	44498298	-	ENST00000341255.3@RTL6	ENST00000341255.3	protein_coding	44498044,44492572	44498298,44497811	Gene ID= ENSG00000188636.3 TPM= 38.24 Transcript Type= protein_coding
chr22	44702198	44737681	44702198	44737681	+	ENST00000336985.10@PRR5	ENST00000336985.10	protein_coding	44702198,44714591,44725244,44726577,44731730,44732251,44735027,44736772	44702608,44714671,44725292,44726634,44731821,44732391,44735162,44737681	Gene ID= ENSG00000186654.20 TPM= 3.19 Transcript Type= protein_coding
chr22	44858535	44860481	44858535	44860481	-	transcript2211.chr22.nnic@NA	transcript2211.chr22.nnic	NA	44858535	44860481	Gene ID= novel_gene_chr22_2212 TPM= 2.12 Transcript Type= NA
chr22	45141639	45143177	45141639	45143177	+	transcript2218.chr22.nnic@NA	transcript2218.chr22.nnic	NA	45141639	45143177	Gene ID= novel_gene_chr22_2219 TPM= 2.12 Transcript Type= NA
chr22	45163841	45188015	45163841	45188015	+	ENST00000347635.8@NUP50	ENST00000347635.8	protein_coding	45163841,45168168,45171600,45175894,45178238,45181286,45183402,45184453	45164296,45168246,45171683,45176080,45178900,45181367,45183520,45188015	Gene ID= ENSG00000093000.18 TPM= 4.25 Transcript Type= protein_coding
chr22	45196038	45212457	45196038	45212457	-	ENST00000488038.5@KIAA0930	ENST00000488038.5	protein_coding	45211956,45205793,45205630,45205217,45203845,45202990,45199873,45197790,45196038	45212457,45205912,45205707,45205318,45203985,45203184,45200035,45197948,45197216	Gene ID= ENSG00000100364.18 TPM= 4.25 Transcript Type= retained_intron
chr22	45192233	45194501	45192233	45194501	-	transcript2239.chr22.nnic@NA	transcript2239.chr22.nnic	NA	45192233	45194501	Gene ID= novel_gene_chr22_2240 TPM= 5.31 Transcript Type= NA
chr22	45502851	45601130	45502851	45601130	+	transcript2252.chr22.nnic@FBLN1	transcript2252.chr22.nnic	protein_coding	45502851,45518682,45525543,45527847,45531265,45533063,45533761,45535200,45541229,45542155,45543401,45547085,45548613,45550492,45574511,45576977,45600307,45601052	45503064,45518787,45525678,45528009,45531324,45533164,45533898,45535337,45541372,45542283,45543526,45547204,45548744,45550615,45574653,45577108,45600987,45601130	Gene ID= ENSG00000077942.18 TPM= 2.12 Transcript Type= NA
chr22	45502891	45601135	45502891	45601135	+	ENST00000327858.10@FBLN1	ENST00000327858.10	protein_coding	45502891,45518682,45525543,45527847,45531265,45533063,45533761,45535200,45541229,45542155,45543401,45547085,45548613,45550492,45574511,45576977,45600307	45503064,45518787,45525678,45528009,45531324,45533164,45533898,45535337,45541372,45542283,45543526,45547204,45548744,45550615,45574653,45577108,45601135	Gene ID= ENSG00000077942.18 TPM= 48.86 Transcript Type= protein_coding
chr22	45502883	45563362	45502883	45563362	+	ENST00000262722.11@FBLN1	ENST00000262722.11	protein_coding	45502883,45518682,45525543,45527847,45531265,45533063,45533761,45535200,45541229,45542155,45543401,45547085,45548613,45550492,45562912	45503064,45518787,45525678,45528009,45531324,45533164,45533898,45535337,45541372,45542283,45543526,45547204,45548744,45550615,45563362	Gene ID= ENSG00000077942.18 TPM= 27.62 Transcript Type= protein_coding
chr22	45671799	45845307	45671799	45845307	+	ENST00000252934.9@ATXN10	ENST00000252934.9	protein_coding	45671799,45689712,45692996,45700282,45702689,45718413,45729425,45738731,45740369,45806959,45842991,45843669	45672179,45689903,45693078,45700378,45702847,45718493,45729590,45738839,45740538,45807022,45843178,45845307	Gene ID= ENSG00000130638.16 TPM= 10.62 Transcript Type= protein_coding
chr22	45753379	45754959	45753379	45754959	-	transcript2273.chr22.nnic@NA	transcript2273.chr22.nnic	NA	45753379	45754959	Gene ID= novel_gene_chr22_2274 TPM= 11.68 Transcript Type= NA
chr22	46013606	46015498	46013606	46015498	+	ENST00000608290.1@BX537318.1	ENST00000608290.1	lincRNA	46013606,46014497	46013810,46015498	Gene ID= ENSG00000273145.1 TPM= 4.25 Transcript Type= lincRNA
chr22	46053705	46057210	46053705	46057210	+	ENST00000416202.5@PRR34-AS1	ENST00000416202.5	antisense_RNA	46053705,46056847,46057062	46053920,46056945,46057210	Gene ID= ENSG00000241990.5 TPM= 115.78 Transcript Type= antisense_RNA
chr22	46107703	46111666	46107703	46111666	+	transcript2284.chr22.nic@MIRLET7BHG	transcript2284.chr22.nic	lincRNA	46107703,46109671	46109353,46111666	Gene ID= ENSG00000197182.14 TPM= 6.37 Transcript Type= NA
chr22	46053869	46106023	46053869	46106023	+	ENST00000381051.6@MIRLET7BHG	ENST00000381051.6	lincRNA	46053869,46097926,46098494,46103192,46105409	46053920,46098010,46098558,46103249,46106023	Gene ID= ENSG00000197182.14 TPM= 3.19 Transcript Type= lincRNA
chr22	46072967	46079369	46072967	46079369	-	transcript2290.chr22.nnic@NA	transcript2290.chr22.nnic	NA	46072967	46079369	Gene ID= novel_gene_chr22_2291 TPM= 46.74 Transcript Type= NA
chr22	46079644	46082258	46079644	46082258	+	transcript2286.chr22.nnic@NA	transcript2286.chr22.nnic	NA	46079644	46082258	Gene ID= novel_gene_chr22_2287 TPM= 3.19 Transcript Type= NA
chr22	46082803	46088336	46082803	46088336	-	transcript2288.chr22.nnic@NA	transcript2288.chr22.nnic	NA	46082803	46088336	Gene ID= novel_gene_chr22_2289 TPM= 39.3 Transcript Type= NA
chr22	46238726	46241929	46238726	46241929	+	transcript2310.chr22.nnic@NA	transcript2310.chr22.nnic	NA	46238726	46241929	Gene ID= novel_gene_chr22_2311 TPM= 30.8 Transcript Type= NA
chr22	46244013	46250679	46244013	46250679	-	ENST00000314567.7@CDPF1	ENST00000314567.7	protein_coding	46250256,46248172,46247110,46244013	46250679,46248284,46247221,46245238	Gene ID= ENSG00000205643.10 TPM= 13.81 Transcript Type= protein_coding
chr22	46250396	46252599	46250396	46252599	+	transcript2325.chr22.nnic@NA	transcript2325.chr22.nnic	NA	46250396	46252599	Gene ID= novel_gene_chr22_2326 TPM= 5.31 Transcript Type= NA
chr22	46268020	46293999	46268020	46293999	+	transcript2320.chr22.nic@TTC38	transcript2320.chr22.nic	protein_coding	46268020,46268514,46272335,46273898,46275248,46278586,46281599,46283973,46285241,46287073,46288423,46289402,46289826,46292203,46292791	46268072,46268591,46272416,46274069,46275421,46278661,46281718,46284032,46285279,46287154,46288588,46289561,46289899,46292328,46293999	Gene ID= ENSG00000075234.16 TPM= 5.84 Transcript Type= NA
chr22	46267964	46294008	46267964	46294008	+	ENST00000381031.7@TTC38	ENST00000381031.7	protein_coding	46267964,46268514,46272335,46273898,46275248,46278586,46281599,46283973,46285241,46287073,46288423,46289402,46289826,46292791	46268072,46268591,46272416,46274069,46275421,46278661,46281718,46284032,46285279,46287154,46288588,46289561,46289899,46294008	Gene ID= ENSG00000075234.16 TPM= 19.65 Transcript Type= protein_coding
chr22	46335425	46357340	46335425	46357340	+	ENST00000290846.8@TRMU	ENST00000290846.8	protein_coding	46335425,46337779,46343262,46346422,46350291,46352121,46352264,46353767,46355444,46355990,46356842	46335846,46337944,46343368,46346544,46350463,46352174,46352330,46353867,46355588,46356072,46357340	Gene ID= ENSG00000100416.12 TPM= 16.46 Transcript Type= protein_coding
chr22	46335425	46357337	46335425	46357337	+	ENST00000457572.5@TRMU	ENST00000457572.5	protein_coding	46335425,46337779,46343262,46346422,46350346,46352121,46352264,46353767,46355444,46355990,46356842	46335846,46337944,46343368,46346544,46350463,46352174,46352330,46353867,46355588,46356072,46357337	Gene ID= ENSG00000100416.12 TPM= 3.72 Transcript Type= nonsense_mediated_decay
chr22	46335704	46357338	46335704	46357338	+	transcript2333.chr22.nic@TRMU	transcript2333.chr22.nic	protein_coding	46335704,46337779,46343262,46346422,46350291,46352121,46352264,46353767,46355444,46356842	46335846,46337944,46343368,46346544,46350463,46352174,46352330,46353867,46356072,46357338	Gene ID= ENSG00000100416.12 TPM= 2.66 Transcript Type= NA
chr22	46335425	46357337	46335425	46357337	+	ENST00000381021.7@TRMU	ENST00000381021.7	protein_coding	46335425,46337779,46346422,46350291,46352121,46352264,46353767,46355444,46355990,46356842	46335846,46337944,46346544,46350463,46352174,46352330,46353867,46355588,46356072,46357337	Gene ID= ENSG00000100416.12 TPM= 5.84 Transcript Type= nonsense_mediated_decay
chr22	46335425	46357337	46335425	46357337	+	ENST00000453630.5@TRMU	ENST00000453630.5	protein_coding	46335425,46337779,46346422,46350346,46352121,46352264,46353767,46355444,46355990,46356842	46335846,46337944,46346544,46350463,46352174,46352330,46353867,46355588,46356072,46357337	Gene ID= ENSG00000100416.12 TPM= 1.59 Transcript Type= nonsense_mediated_decay
chr22	46335401	46357335	46335401	46357335	+	ENST00000441818.5@TRMU	ENST00000441818.5	protein_coding	46335401,46337779,46346422,46350350,46352121,46352264,46353767,46355444,46355990,46356842	46335846,46337944,46346544,46350463,46352174,46352330,46353867,46355588,46356072,46357335	Gene ID= ENSG00000100416.12 TPM= 2.66 Transcript Type= nonsense_mediated_decay
chr22	46335704	46357337	46335704	46357337	+	transcript2341.chr22.nic@TRMU	transcript2341.chr22.nic	protein_coding	46335704,46337779,46343262,46346422,46350291,46352121,46352264,46353767,46355444	46335846,46337944,46343368,46346544,46350463,46352174,46352330,46353867,46357337	Gene ID= ENSG00000100416.12 TPM= 3.19 Transcript Type= NA
chr22	46530308	46534200	46530308	46534200	-	ENST00000497509.1@CELSR1	ENST00000497509.1	protein_coding	46533627,46530308	46534200,46530500	Gene ID= ENSG00000075275.16 TPM= 1.06 Transcript Type= processed_transcript
chr22	46537700	46539467	46537700	46539467	+	transcript2357.chr22.nnic@NA	transcript2357.chr22.nnic	NA	46537700	46539467	Gene ID= novel_gene_chr22_2358 TPM= 2.12 Transcript Type= NA
chr22	46575645	46679785	46575645	46679785	+	transcript2361.chr22.nnic@GRAMD4	transcript2361.chr22.nnic	protein_coding	46575645,46626751,46637840,46658187,46661381,46663040,46663838,46664026,46665615,46666825,46668096,46668689,46668799,46672843,46673670,46674657,46675468,46676600,46677147	46575974,46626961,46637960,46658307,46661442,46663172,46663863,46664117,46665706,46666873,46668167,46668732,46668908,46672997,46673814,46674750,46675552,46676668,46679785	Gene ID= ENSG00000075240.16 TPM= 19.65 Transcript Type= NA
chr22	46577088	46679785	46577088	46679785	+	transcript2365.chr22.nic@GRAMD4	transcript2365.chr22.nic	protein_coding	46577088,46626751,46637840,46658187,46661381,46663040,46663838,46664026,46665615,46666825,46668096,46668689,46668799,46672843,46673670,46674657,46675468,46676600,46677147	46577290,46626961,46637960,46658307,46661442,46663172,46663863,46664117,46665706,46666873,46668167,46668732,46668908,46672997,46673814,46674750,46675552,46676668,46679785	Gene ID= ENSG00000075240.16 TPM= 44.43 Transcript Type= NA
chr22	46577088	46682756	46577088	46682756	+	transcript2368.chr22.nnic@GRAMD4	transcript2368.chr22.nnic	protein_coding	46577088,46626751,46637840,46658187,46661381,46663040,46663838,46664026,46665615,46666825,46668096,46668689,46668799,46672843,46673670,46674657,46675468,46682411	46577290,46626961,46637960,46658307,46661442,46663172,46663863,46664117,46665706,46666873,46668167,46668732,46668908,46672997,46673814,46674750,46675552,46682756	Gene ID= ENSG00000075240.16 TPM= 4.6 Transcript Type= NA
chr22	46577167	46642568	46577167	46642568	+	transcript2372.chr22.nnic@GRAMD4	transcript2372.chr22.nnic	protein_coding	46577167,46626751,46637840,46642123	46577290,46626961,46637960,46642568	Gene ID= ENSG00000075240.16 TPM= 3.19 Transcript Type= NA
chr22	46675989	46679785	46675989	46679785	+	transcript2373.chr22.nic@GRAMD4	transcript2373.chr22.nic	protein_coding	46675989,46677147	46676668,46679785	Gene ID= ENSG00000075240.16 TPM= 11.68 Transcript Type= NA
chr22	46644899	46647946	46644899	46647946	-	transcript2376.chr22.nnic@NA	transcript2376.chr22.nnic	NA	46644899	46647946	Gene ID= novel_gene_chr22_2377 TPM= 13.81 Transcript Type= NA
chr22	46681230	46682754	46681230	46682754	+	transcript2374.chr22.nnic@NA	transcript2374.chr22.nnic	NA	46681230	46682754	Gene ID= novel_gene_chr22_2375 TPM= 5.31 Transcript Type= NA
chr22	46684411	46738261	46684411	46738261	-	ENST00000216264.12@CERK	ENST00000216264.12	protein_coding	46738007,46720902,46720086,46712168,46711086,46707843,46701636,46699313,46695210,46693427,46691572,46689992,46684411	46738261,46721015,46720208,46712293,46711149,46707988,46701710,46699465,46695315,46693503,46691777,46690200,46687206	Gene ID= ENSG00000100422.13 TPM= 69.04 Transcript Type= protein_coding
chr22	46734610	46738219	46734610	46738219	-	transcript2383.chr22.nnic@NA	transcript2383.chr22.nnic	NA	46734610	46738219	Gene ID= novel_gene_chr22_2384 TPM= 3.19 Transcript Type= NA
chr22	46762621	47175693	46762621	47175693	+	ENST00000337137.8@TBC1D22A	ENST00000337137.8	protein_coding	46762621,46792520,46793501,46797444,46878653,46891266,46894784,46912074,46974290,46997634,47037071,47111508,47173498	46762848,46792576,46793841,46797620,46878723,46891394,46894846,46912188,46974399,46997709,47037198,47111603,47175693	Gene ID= ENSG00000054611.13 TPM= 33.99 Transcript Type= protein_coding
chr22	46762627	47037932	46762627	47037932	+	transcript2390.chr22.nic@TBC1D22A	transcript2390.chr22.nic	protein_coding	46762627,46792520,46793501,46797444,46878653,46891266,46894784,46912074,46974290,46997634,47037071	46762848,46792576,46793841,46797620,46878723,46891394,46894846,46912188,46974399,46997709,47037932	Gene ID= ENSG00000054611.13 TPM= 3.19 Transcript Type= NA
chr22	46762627	46976200	46762627	46976200	+	transcript2392.chr22.nnic@TBC1D22A	transcript2392.chr22.nnic	protein_coding	46762627,46792520,46793501,46797444,46878653,46891266,46894784,46912074,46974290,46975836	46762848,46792576,46793841,46797620,46878723,46891394,46894846,46912188,46974399,46976200	Gene ID= ENSG00000054611.13 TPM= 3.19 Transcript Type= NA
chr22	46781142	46782650	46781142	46782650	-	transcript2395.chr22.nnic@NA	transcript2395.chr22.nnic	NA	46781142	46782650	Gene ID= novel_gene_chr22_2396 TPM= 3.19 Transcript Type= NA
chr22	48576306	48751932	48576306	48751932	+	ENST00000358295.9@FAM19A5	ENST00000358295.9	protein_coding	48576306,48646597,48707717,48749839	48576571,48646746,48707844,48751932	Gene ID= ENSG00000219438.8 TPM= 2.12 Transcript Type= protein_coding
chr22	49773283	49827943	49773283	49827943	-	transcript2400.chr22.nic@BRD1	transcript2400.chr22.nic	protein_coding	49827497,49822951,49804204,49798988,49798558,49797805,49794034,49787390,49777678,49777034,49776050,49775591,49773283	49827943,49824331,49804360,49799119,49798686,49798117,49794294,49787494,49777813,49777161,49776159,49775745,49774416	Gene ID= ENSG00000100425.18 TPM= 15.4 Transcript Type= NA
chr22	49773283	49827512	49773283	49827512	-	ENST00000404760.5@BRD1	ENST00000404760.5	protein_coding	49827497,49822951,49804204,49798988,49798558,49797805,49794034,49787390,49777678,49777034,49776050,49775591,49773283	49827512,49824331,49804360,49799119,49798686,49798117,49794294,49787887,49777813,49777161,49776159,49775745,49774416	Gene ID= ENSG00000100425.18 TPM= 5.84 Transcript Type= protein_coding
chr22	49884698	49888444	49884698	49888444	+	transcript2407.chr22.nnic@NA	transcript2407.chr22.nnic	NA	49884698	49888444	Gene ID= novel_gene_chr22_2408 TPM= 7.44 Transcript Type= NA
chr22	49900229	49918458	49900229	49918458	-	ENST00000330817.10@ALG12	ENST00000330817.10	protein_coding	49918263,49913604,49913385,49910434,49909894,49909244,49907721,49904337,49904179,49900229	49918458,49913843,49913517,49910607,49910088,49909347,49907944,49904506,49904254,49904066	Gene ID= ENSG00000182858.13 TPM= 21.77 Transcript Type= protein_coding
chr22	49903204	49918456	49903204	49918456	-	transcript2412.chr22.nic@ALG12	transcript2412.chr22.nic	protein_coding	49918263,49913604,49913385,49910434,49909894,49909244,49907721,49904337,49903204	49918456,49913843,49913517,49910607,49910088,49909347,49907944,49904506,49904254	Gene ID= ENSG00000182858.13 TPM= 5.84 Transcript Type= NA
chr22	49918635	49927540	49918635	49927540	+	ENST00000404488.7@CRELD2	ENST00000404488.7	protein_coding	49918635,49919230,49919730,49920156,49921585,49922297,49922612,49923234,49924360,49925417,49927255	49918898,49919312,49919840,49920247,49921761,49922443,49922707,49923317,49924455,49925557,49927540	Gene ID= ENSG00000184164.14 TPM= 29.21 Transcript Type= protein_coding
chr22	49918696	49927528	49918696	49927528	+	ENST00000328268.8@CRELD2	ENST00000328268.8	protein_coding	49918696,49919230,49919730,49920156,49921585,49922612,49923234,49924360,49925417,49927255	49918898,49919312,49919840,49920247,49921761,49922707,49923317,49924455,49925557,49927528	Gene ID= ENSG00000184164.14 TPM= 100.37 Transcript Type= protein_coding
chr22	49932288	49934765	49932288	49934765	-	transcript2428.chr22.nnic@NA	transcript2428.chr22.nnic	NA	49932288	49934765	Gene ID= novel_gene_chr22_2429 TPM= 2.12 Transcript Type= NA
chr22	49960463	49964080	49960463	49964080	+	transcript2435.chr22.nic@PIM3	transcript2435.chr22.nic	protein_coding	49960463,49961125,49961442,49962689,49962940	49961032,49961368,49961811,49962865,49964080	Gene ID= ENSG00000198355.4 TPM= 7.44 Transcript Type= NA
chr22	49960475	49964080	49960475	49964080	+	transcript2436.chr22.nic@PIM3	transcript2436.chr22.nic	protein_coding	49960475,49961318,49961442,49962689,49962940	49961234,49961368,49961811,49962865,49964080	Gene ID= ENSG00000198355.4 TPM= 15.93 Transcript Type= NA
chr22	49960513	49964080	49960513	49964080	+	ENST00000360612.4@PIM3	ENST00000360612.4	protein_coding	49960513,49961125,49961318,49961442,49962689,49962940	49961032,49961234,49961368,49961811,49962865,49964080	Gene ID= ENSG00000198355.4 TPM= 247.48 Transcript Type= protein_coding
chr22	49960776	49964076	49960776	49964076	+	transcript2440.chr22.nnic@NA	transcript2440.chr22.nnic	NA	49960776	49964076	Gene ID= novel_gene_chr22_2441 TPM= 5.31 Transcript Type= NA
chr22	50185901	50199569	50185901	50199569	+	transcript2444.chr22.nic@TRABD	transcript2444.chr22.nic	protein_coding	50185901,50193027,50193576,50194340,50194900,50197241,50197449,50197823,50198075,50198345,50199116	50185976,50193093,50193654,50194506,50195040,50197351,50197588,50197995,50198186,50198515,50199569	Gene ID= ENSG00000170638.9 TPM= 2.12 Transcript Type= NA
chr22	50185901	50199595	50185901	50199595	+	transcript2457.chr22.nic@TRABD	transcript2457.chr22.nic	protein_coding	50185901,50193027,50193576,50194340,50194900,50197241,50197449,50197823,50198345	50185976,50193093,50193654,50194506,50195040,50197351,50197588,50198186,50199595	Gene ID= ENSG00000170638.9 TPM= 9.56 Transcript Type= NA
chr22	50185918	50199595	50185918	50199595	+	ENST00000463233.1@TRABD	ENST00000463233.1	protein_coding	50185918,50193027,50193576,50194340,50194900,50197241,50197449,50197823,50198345	50186001,50193093,50193654,50194506,50195040,50197351,50197588,50198186,50199595	Gene ID= ENSG00000170638.9 TPM= 19.12 Transcript Type= retained_intron
chr22	50185917	50199598	50185917	50199598	+	ENST00000303434.8@TRABD	ENST00000303434.8	protein_coding	50185917,50193027,50193576,50194340,50194900,50197241,50197449,50197823,50198075,50198345	50186001,50193093,50193654,50194506,50195040,50197351,50197588,50197995,50198186,50199598	Gene ID= ENSG00000170638.9 TPM= 14.87 Transcript Type= protein_coding
chr22	50185915	50199564	50185915	50199564	+	ENST00000380909.8@TRABD	ENST00000380909.8	protein_coding	50185915,50193027,50193576,50194340,50194900,50197241,50197449,50197823,50198075,50198345	50185976,50193093,50193654,50194506,50195040,50197351,50197588,50197995,50198186,50199564	Gene ID= ENSG00000170638.9 TPM= 5.31 Transcript Type= protein_coding
chr22	50199091	50200891	50199091	50200891	-	transcript2463.chr22.nnic@NA	transcript2463.chr22.nnic	NA	50199091	50200891	Gene ID= novel_gene_chr22_2464 TPM= 6.37 Transcript Type= NA
chr22	50200997	50217616	50200997	50217616	+	transcript2471.chr22.nnic@SELENOO	transcript2471.chr22.nnic	protein_coding	50200997,50206317,50208536,50210181,50210631,50215717,50216691,50216972,50217205	50201590,50206462,50208716,50210311,50210911,50215867,50216876,50217128,50217616	Gene ID= ENSG00000073169.13 TPM= 8.5 Transcript Type= NA
chr22	50200997	50217616	50200997	50217616	+	transcript2472.chr22.nic@SELENOO	transcript2472.chr22.nic	protein_coding	50200997,50206317,50208488,50210181,50210631,50215717,50216691,50216972,50217205	50201590,50206520,50208716,50210311,50210911,50215867,50216876,50217128,50217616	Gene ID= ENSG00000073169.13 TPM= 6.37 Transcript Type= NA
chr22	50200979	50217616	50200979	50217616	+	ENST00000380903.6@SELENOO	ENST00000380903.6	protein_coding	50200979,50206317,50208536,50210181,50210631,50215717,50216691,50216972,50217205	50201590,50206520,50208716,50210311,50210911,50215867,50216876,50217128,50217616	Gene ID= ENSG00000073169.13 TPM= 43.55 Transcript Type= protein_coding
chr22	50201022	50204004	50201022	50204004	+	transcript2477.chr22.nnic@NA	transcript2477.chr22.nnic	NA	50201022	50204004	Gene ID= novel_gene_chr22_2478 TPM= 3.19 Transcript Type= NA
chr22	50217689	50244992	50217689	50244992	-	ENST00000498611.5@TUBGCP6	ENST00000498611.5	protein_coding	50243719,50240204,50233316,50229404,50227907,50226999,50226733,50226287,50226050,50225794,50224511,50224332,50224141,50222454,50222028,50221275,50219957,50219288,50219068,50218703,50218488,50217918,50217689	50244992,50240367,50233526,50229577,50228028,50227077,50226842,50226378,50226189,50225943,50224592,50224420,50224256,50222592,50222102,50221874,50220015,50219791,50219209,50218897,50218620,50218402,50217827	Gene ID= ENSG00000128159.11 TPM= 13.81 Transcript Type= retained_intron
chr22	50245066	50245180	50245066	50245180	+	transcript2481.chr22.nnic@NA	transcript2481.chr22.nnic	NA	50245066	50245180	Gene ID= novel_gene_chr22_2482 TPM= 2.12 Transcript Type= NA
chr22	50252901	50261745	50252901	50261745	-	transcript2492.chr22.nnic@MAPK12	transcript2492.chr22.nnic	protein_coding	50261385,50261167,50258243,50257082,50256935,50256599,50256085,50255810,50255615,50255453,50255247,50252901	50261745,50261296,50258301,50257193,50256964,50256646,50256199,50255881,50255694,50255531,50255370,50253480	Gene ID= ENSG00000188130.13 TPM= 5.31 Transcript Type= NA
chr22	50252903	50261825	50252903	50261825	-	ENST00000215659.12@MAPK12	ENST00000215659.12	protein_coding	50261385,50261167,50258243,50257082,50256935,50256599,50256085,50255810,50255615,50255453,50255197,50252903	50261825,50261296,50258301,50257193,50256964,50256646,50256199,50255881,50255694,50255531,50255370,50253480	Gene ID= ENSG00000188130.13 TPM= 53.85 Transcript Type= protein_coding
chr22	50253781	50261814	50253781	50261814	-	transcript2499.chr22.nnic@MAPK12	transcript2499.chr22.nnic	protein_coding	50261385,50261167,50258243,50257082,50256935,50256599,50256085,50255810,50255615,50255453,50255197,50253781	50261814,50261296,50258301,50257193,50256964,50256646,50256199,50255881,50255694,50255531,50255370,50254486	Gene ID= ENSG00000188130.13 TPM= 4.78 Transcript Type= NA
chr22	50252903	50261706	50252903	50261706	-	transcript2502.chr22.nic@MAPK12	transcript2502.chr22.nic	protein_coding	50261167,50258243,50257082,50256935,50256599,50256085,50255810,50255615,50255453,50255197,50252903	50261706,50258301,50257193,50256964,50256646,50256199,50255881,50255694,50255531,50255370,50253480	Gene ID= ENSG00000188130.13 TPM= 4.99 Transcript Type= NA
chr22	50253788	50261746	50253788	50261746	-	transcript2507.chr22.nic@MAPK12	transcript2507.chr22.nic	protein_coding	50261385,50261167,50258243,50257082,50256935,50256599,50256085,50255810,50255615,50255453,50253788	50261746,50261296,50258301,50257193,50256964,50256646,50256199,50255881,50255694,50255531,50255370	Gene ID= ENSG00000188130.13 TPM= 6.9 Transcript Type= NA
chr22	50252903	50261716	50252903	50261716	-	ENST00000622558.4@MAPK12	ENST00000622558.4	protein_coding	50261385,50261167,50258243,50257082,50256599,50256085,50255810,50255615,50255453,50255197,50252903	50261716,50261296,50258301,50257193,50256646,50256199,50255881,50255694,50255531,50255370,50253480	Gene ID= ENSG00000188130.13 TPM= 7.65 Transcript Type= protein_coding
chr22	50252903	50261308	50252903	50261308	-	ENST00000395780.5@MAPK12	ENST00000395780.5	protein_coding	50261167,50258243,50257082,50256599,50256085,50255810,50255615,50255453,50255197,50252903	50261308,50258301,50257193,50256646,50256199,50255881,50255694,50255531,50255370,50253480	Gene ID= ENSG00000188130.13 TPM= 1.27 Transcript Type= protein_coding
chr22	50274979	50307659	50274979	50307659	-	transcript2517.chr22.nnic@PLXNB2	transcript2517.chr22.nnic	protein_coding	50307553,50295377,50294719,50289517,50288960,50288743,50287937,50287667,50287111,50286173,50285990,50285800,50284573,50284132,50283833,50283602,50283337,50283050,50282711,50282184,50281854,50281566,50281360,50281089,50280744,50280489,50280005,50279630,50278855,50278596,50278435,50278117,50277853,50277591,50276842,50276629,50275889,50274979	50307659,50295429,50294778,50290597,50289142,50288871,50288037,50287793,50287264,50286287,50286098,50285901,50284665,50284213,50283990,50283750,50283445,50283186,50282881,50282313,50282081,50281742,50281499,50281189,50280973,50280670,50280071,50279776,50279011,50278696,50278519,50278271,50278013,50277738,50276906,50276704,50275963,50275808	Gene ID= ENSG00000196576.14 TPM= 104.09 Transcript Type= NA
chr22	50311966	50327375	50311966	50327375	-	transcript2526.chr22.nic@DENND6B	transcript2526.chr22.nic	protein_coding	50326812,50318965,50318847,50317908,50317293,50316566,50316370,50316174,50316025,50315714,50314799,50314605,50314400,50314207,50313814,50313635,50313446,50312999,50312523,50312343,50311966	50327375,50319003,50318889,50318020,50317373,50316712,50316475,50316253,50316087,50315769,50314921,50314700,50314494,50314272,50313878,50313724,50313499,50313108,50312625,50312417,50312261	Gene ID= ENSG00000205593.11 TPM= 4.25 Transcript Type= NA
chr22	50311966	50326977	50311966	50326977	-	ENST00000495607.5@DENND6B	ENST00000495607.5	protein_coding	50326812,50318965,50318847,50317908,50317293,50316025,50315714,50314799,50314605,50314400,50313814,50313635,50313446,50312999,50312523,50312343,50311966	50326977,50319003,50318889,50318020,50317373,50316475,50315769,50314921,50314700,50314494,50314272,50313724,50313499,50313108,50312625,50312417,50312261	Gene ID= ENSG00000205593.11 TPM= 2.12 Transcript Type= retained_intron
chr22	50343317	50445090	50343317	50445090	+	ENST00000612753.4@PPP6R2	ENST00000612753.4	protein_coding	50343317,50372020,50393893,50406689,50414552,50416092,50418867,50419349,50422254,50423462,50431173,50432265,50434966,50436367,50436988,50437506,50437843,50438174,50438599,50439701,50439961,50440822,50443866,50444199	50343550,50372150,50394135,50406875,50414689,50416157,50418979,50419462,50422380,50423614,50431382,50432329,50435081,50436452,50437068,50437603,50437900,50438298,50438762,50439857,50440049,50441026,50444117,50445090	Gene ID= ENSG00000100239.15 TPM= 7.97 Transcript Type= protein_coding
chr22	50343331	50444374	50343331	50444374	+	ENST00000395744.7@PPP6R2	ENST00000395744.7	protein_coding	50343331,50372020,50393893,50406689,50414552,50416092,50418867,50419349,50422254,50423462,50431173,50432265,50434966,50436367,50437506,50437843,50438174,50438599,50439701,50439961,50440822,50443866,50444199	50343550,50372150,50394135,50406875,50414689,50416157,50418979,50419462,50422380,50423614,50431382,50432329,50435081,50436452,50437603,50437900,50438298,50438762,50439857,50440049,50441026,50444117,50444374	Gene ID= ENSG00000100239.15 TPM= 20.71 Transcript Type= protein_coding
chr22	50446806	50475080	50446806	50475080	-	transcript2529.chr22.nic@SBF1	transcript2529.chr22.nic	protein_coding	50474786,50468376,50467786,50467532,50467338,50466605,50466350,50466150,50465961,50465763,50465215,50465001,50464819,50464534,50464329,50463283,50462870,50462559,50462205,50461947,50461796,50461523,50461159,50460534,50460272,50459952,50459470,50459255,50457034,50456492,50456216,50455481,50455224,50455016,50454814,50454512,50448543,50448233,50447522,50447322,50446806	50475080,50468461,50467923,50467693,50467448,50466710,50466482,50466258,50466074,50465840,50465328,50465129,50464917,50464738,50464441,50463432,50462938,50462717,50462473,50462119,50461869,50461718,50461286,50460712,50460408,50460159,50459666,50459392,50457111,50456673,50456395,50455582,50455409,50455142,50454944,50454742,50448650,50448444,50447609,50447453,50447240	Gene ID= ENSG00000100241.20 TPM= 46.38 Transcript Type= NA
chr22	50445000	50475024	50445000	50475024	-	ENST00000380817.7@SBF1	ENST00000380817.7	protein_coding	50474786,50468376,50467786,50467532,50467338,50466605,50466350,50466150,50465961,50465763,50465215,50465001,50464819,50464534,50464329,50463283,50462870,50462559,50462205,50461947,50461796,50461523,50461159,50460534,50460272,50459952,50459470,50459255,50457034,50456492,50456216,50455481,50455224,50455016,50454814,50454512,50448543,50448233,50447522,50447322,50445000	50475024,50468461,50467923,50467690,50467448,50466710,50466482,50466258,50466074,50465840,50465328,50465129,50464917,50464738,50464441,50463432,50462938,50462717,50462473,50462119,50461869,50461718,50461286,50460712,50460408,50460159,50459666,50459392,50457111,50456673,50456395,50455582,50455409,50455142,50454944,50454742,50448650,50448444,50447609,50447453,50447240	Gene ID= ENSG00000100241.20 TPM= 35.76 Transcript Type= protein_coding
chr22	50502949	50507712	50502949	50507712	-	transcript2552.chr22.nnic@LMF2	transcript2552.chr22.nnic	protein_coding	50507582,50506782,50506638,50506285,50506035,50505674,50505403,50505229,50505057,50504802,50504559,50504340,50503808,50502949	50507712,50507104,50506666,50506502,50506213,50505815,50505537,50505334,50505153,50504984,50504727,50504451,50503904,50503699	Gene ID= ENSG00000100258.17 TPM= 6.29 Transcript Type= NA
chr22	50502949	50507706	50502949	50507706	-	transcript2554.chr22.nic@LMF2	transcript2554.chr22.nic	protein_coding	50506782,50506638,50506285,50506035,50505674,50505403,50505229,50505057,50504802,50504559,50504340,50503808,50502949	50507706,50506666,50506502,50506213,50505815,50505537,50505334,50505153,50504984,50504727,50504451,50503904,50503699	Gene ID= ENSG00000100258.17 TPM= 7.88 Transcript Type= NA
chr22	50502949	50507706	50502949	50507706	-	transcript2555.chr22.nic@LMF2	transcript2555.chr22.nic	protein_coding	50507582,50506782,50506638,50506285,50506035,50505674,50505403,50505229,50505057,50504802,50504340,50503808,50502949	50507706,50507035,50506666,50506502,50506213,50505815,50505537,50505334,50505153,50504984,50504727,50503904,50503699	Gene ID= ENSG00000100258.17 TPM= 6.55 Transcript Type= NA
chr22	50502949	50507706	50502949	50507706	-	transcript2557.chr22.nic@LMF2	transcript2557.chr22.nic	protein_coding	50506782,50506638,50506285,50506035,50505674,50505403,50505229,50505057,50504802,50504340,50503808,50502949	50507706,50506666,50506502,50506213,50505815,50505537,50505334,50505153,50504984,50504727,50503904,50503699	Gene ID= ENSG00000100258.17 TPM= 6.02 Transcript Type= NA
chr22	50502949	50507691	50502949	50507691	-	ENST00000474879.6@LMF2	ENST00000474879.6	protein_coding	50507582,50506782,50506638,50506285,50506035,50505674,50505403,50505229,50505057,50504802,50504559,50504340,50503808,50502949	50507691,50507035,50506666,50506502,50506213,50505815,50505537,50505334,50505153,50504984,50504727,50504451,50503904,50503699	Gene ID= ENSG00000100258.17 TPM= 43.46 Transcript Type= protein_coding
chr22	50502951	50507684	50502951	50507684	-	ENST00000216080.5@LMF2	ENST00000216080.5	protein_coding	50507582,50506782,50506638,50506285,50506035,50505674,50505403,50505229,50505057,50504802,50504559,50504340,50503808,50502951	50507684,50507120,50506666,50506502,50506213,50505815,50505537,50505334,50505153,50504984,50504727,50504451,50503904,50503699	Gene ID= ENSG00000100258.17 TPM= 9.47 Transcript Type= protein_coding
chr22	50508216	50523472	50508216	50523472	+	ENST00000420993.6@NCAPH2	ENST00000420993.6	protein_coding	50508216,50516447,50517427,50517577,50517741,50517973,50518133,50518649,50519190,50520965,50521543,50521741,50521986,50522181,50522343,50522501,50522671,50522821,50523017,50523235	50508445,50516548,50517482,50517661,50517809,50518052,50518278,50518732,50519320,50521036,50521609,50521848,50522039,50522251,50522415,50522569,50522720,50522922,50523166,50523472	Gene ID= ENSG00000025770.18 TPM= 60.54 Transcript Type= protein_coding
chr22	50508224	50523472	50508224	50523472	+	transcript2570.chr22.nic@NCAPH2	transcript2570.chr22.nic	protein_coding	50508224,50516447,50517427,50517577,50517741,50517973,50518133,50518649,50519190,50520965,50521543,50521741,50521986,50522181,50522343,50522501,50522671,50523017,50523235	50508445,50516548,50517482,50517661,50517809,50518052,50518278,50518732,50519320,50521036,50521609,50521848,50522039,50522251,50522415,50522569,50522922,50523166,50523472	Gene ID= ENSG00000025770.18 TPM= 10.62 Transcript Type= NA
chr22	50508243	50519752	50508243	50519752	+	ENST00000395698.7@NCAPH2	ENST00000395698.7	protein_coding	50508243,50516447,50517427,50517577,50517741,50517973,50518133,50518649,50519190	50508445,50516548,50517482,50517661,50517809,50518052,50518278,50518732,50519752	Gene ID= ENSG00000025770.18 TPM= 1.06 Transcript Type= protein_coding
chr22	50523568	50525606	50523568	50525606	-	ENST00000395693.7@SCO2	ENST00000395693.7	protein_coding	50525472,50523568	50525606,50524424	Gene ID= ENSG00000130489.14 TPM= 54.17 Transcript Type= protein_coding
chr22	50525752	50530056	50525752	50530056	-	ENST00000252029.7@TYMP	ENST00000252029.7	protein_coding	50529904,50529496,50529136,50528512,50527588,50527165,50526576,50526246,50526001,50525752	50530056,50529719,50529338,50528610,50527717,50527283,50526738,50526476,50526141,50525918	Gene ID= ENSG00000025708.13 TPM= 23.63 Transcript Type= protein_coding
chr22	50525785	50529990	50525785	50529990	-	ENST00000425169.1@TYMP	ENST00000425169.1	protein_coding	50529904,50529496,50529136,50527588,50527165,50526576,50526246,50526001,50525785	50529990,50529719,50529338,50527717,50527283,50526738,50526476,50526141,50525918	Gene ID= ENSG00000025708.13 TPM= 1.33 Transcript Type= protein_coding
chr22	50525755	50529996	50525755	50529996	-	ENST00000487577.5@TYMP	ENST00000487577.5	protein_coding	50529496,50529136,50528512,50527588,50527165,50526576,50526246,50526001,50525755	50529996,50529338,50528610,50527717,50527283,50526738,50526476,50526141,50525918	Gene ID= ENSG00000025708.13 TPM= 13.01 Transcript Type= retained_intron
chr22	50525756	50530032	50525756	50530032	-	ENST00000395678.7@TYMP	ENST00000395678.7	protein_coding	50529904,50529496,50529136,50528512,50527588,50527165,50526576,50526246,50526001,50525756	50530032,50529731,50529338,50528610,50527717,50527283,50526738,50526476,50526141,50525918	Gene ID= ENSG00000025708.13 TPM= 2.39 Transcript Type= protein_coding
chr22	50530426	50532534	50530426	50532534	-	transcript2589.chr22.nic@ODF3B	transcript2589.chr22.nic	protein_coding	50531191,50530937,50530712,50530426	50532534,50531058,50530852,50530560	Gene ID= ENSG00000177989.13 TPM= 2.66 Transcript Type= NA
chr22	50530426	50532108	50530426	50532108	-	ENST00000403326.5@ODF3B	ENST00000403326.5	protein_coding	50531969,50531191,50530937,50530712,50530426	50532108,50531295,50531058,50530852,50530560	Gene ID= ENSG00000177989.13 TPM= 1.59 Transcript Type= protein_coding
chr22	50568861	50578473	50568861	50578473	-	transcript2603.chr22.nnic@CPT1B	transcript2603.chr22.nnic	protein_coding	50578386,50577775,50577324,50576857,50576536,50576198,50576035,50574493,50574335,50573520,50572875,50572203,50572006,50571375,50571158,50570891,50570293,50569576,50569213,50568861	50578473,50577934,50577463,50577034,50576637,50576335,50576112,50574600,50574419,50573715,50573060,50572308,50572122,50571539,50571292,50571043,50570406,50569668,50569421,50569081	Gene ID= ENSG00000205560.12 TPM= 17.75 Transcript Type= NA
chr22	50568862	50578417	50568862	50578417	-	ENST00000312108.11@CPT1B	ENST00000312108.11	protein_coding	50578386,50577775,50577324,50576857,50576536,50576198,50576035,50574493,50574335,50573520,50572875,50572203,50572006,50571375,50571158,50570891,50570293,50569576,50569336,50568862	50578417,50577934,50577463,50577034,50576637,50576335,50576112,50574600,50574419,50573715,50573060,50572308,50572122,50571539,50571292,50571043,50570406,50569668,50569421,50569081	Gene ID= ENSG00000205560.12 TPM= 184.37 Transcript Type= protein_coding
chr22	50569084	50578455	50569084	50578455	-	ENST00000395650.6@CPT1B	ENST00000395650.6	protein_coding	50578386,50577775,50577324,50576857,50576536,50576198,50576035,50574493,50574335,50573520,50572875,50572203,50572006,50571375,50571158,50570891,50570293,50569576,50569084	50578455,50577934,50577463,50577034,50576637,50576335,50576112,50574600,50574419,50573715,50573060,50572308,50572122,50571539,50571292,50571043,50570406,50569668,50569421	Gene ID= ENSG00000205560.12 TPM= 70.1 Transcript Type= protein_coding
chr22	50568861	50578677	50568861	50578677	-	transcript2609.chr22.nic@CHKB-CPT1B	transcript2609.chr22.nic	protein_coding	50578549,50577775,50577324,50576857,50576536,50576198,50576035,50574493,50574335,50573520,50572875,50572203,50572006,50571375,50571158,50570891,50570293,50569576,50569336,50568861	50578677,50577934,50577463,50577034,50576637,50576335,50576112,50574600,50574419,50573715,50573060,50572308,50572122,50571539,50571292,50571043,50570406,50569668,50569421,50569081	Gene ID= ENSG00000254413.8 TPM= 172.29 Transcript Type= NA
chr22	50575011	50578409	50575011	50578409	-	transcript2657.chr22.nnic@NA	transcript2657.chr22.nnic	NA	50575011	50578409	Gene ID= novel_gene_chr22_2658 TPM= 3.19 Transcript Type= NA
chr22	50578949	50582999	50578949	50582999	-	ENST00000406938.2@CHKB	ENST00000406938.2	protein_coding	50582558,50582249,50581749,50581420,50580565,50580358,50580190,50579974,50579727,50579426,50578949	50582999,50582357,50581862,50581553,50580660,50580416,50580271,50580082,50579830,50579507,50579255	Gene ID= ENSG00000100288.19 TPM= 41.64 Transcript Type= protein_coding
chr22	50578966	50582820	50578966	50582820	-	ENST00000479003.5@CHKB	ENST00000479003.5	protein_coding	50581749,50581420,50580565,50580190,50579974,50579727,50579426,50578966	50582820,50581553,50580660,50580416,50580082,50579830,50579507,50579255	Gene ID= ENSG00000100288.19 TPM= 7.44 Transcript Type= retained_intron
chr22	50578959	50582854	50578959	50582854	-	ENST00000492582.5@CHKB	ENST00000492582.5	protein_coding	50581749,50581420,50580565,50580358,50580190,50579974,50579727,50579426,50578959	50582854,50581553,50580660,50580416,50580271,50580082,50579830,50579507,50579255	Gene ID= ENSG00000100288.19 TPM= 15.85 Transcript Type= retained_intron
chr22	50583026	50583877	50583026	50583877	+	ENST00000380711.3@CHKB-AS1	ENST00000380711.3	antisense_RNA	50583026,50583598	50583323,50583877	Gene ID= ENSG00000205559.3 TPM= 2.12 Transcript Type= antisense_RNA
chr22	50600685	50611551	50600685	50611551	+	ENST00000329492.5@MAPK8IP2	ENST00000329492.5	protein_coding	50600685,50601789,50603223,50603626,50603841,50605368,50605562,50605825,50606658,50606921,50610212,50610707	50600883,50601894,50603498,50603719,50605064,50605443,50605734,50605934,50606765,50606991,50610310,50611551	Gene ID= ENSG00000008735.13 TPM= 3.19 Transcript Type= protein_coding
chr22	50625018	50628170	50625018	50628170	-	ENST00000356098.9@ARSA	ENST00000356098.9	protein_coding	50627946,50627556,50627166,50626834,50626591,50626154,50625936,50625579,50625018	50628170,50627792,50627406,50627052,50626760,50626278,50626063,50625681,50625464	Gene ID= ENSG00000100299.17 TPM= 18.89 Transcript Type= protein_coding
chr22	50625028	50628189	50625028	50628189	-	transcript2671.chr22.nic@ARSA	transcript2671.chr22.nic	protein_coding	50627556,50626834,50626591,50626154,50625936,50625579,50625028	50628189,50627406,50626760,50626278,50626063,50625681,50625464	Gene ID= ENSG00000100299.17 TPM= 4.73 Transcript Type= NA
chr22	50625029	50628173	50625029	50628173	-	ENST00000453344.6@ARSA	ENST00000453344.6	protein_coding	50627946,50627166,50626834,50626591,50626154,50625936,50625579,50625029	50628173,50627406,50627052,50626760,50626278,50626063,50625681,50625464	Gene ID= ENSG00000100299.17 TPM= 7.56 Transcript Type= protein_coding
chr22	50625018	50628172	50625018	50628172	-	ENST00000216124.9@ARSA	ENST00000216124.9	protein_coding	50627556,50627166,50626834,50626591,50626154,50625936,50625579,50625018	50628172,50627406,50627052,50626760,50626278,50626063,50625681,50625464	Gene ID= ENSG00000100299.17 TPM= 27.38 Transcript Type= protein_coding
chr22	50625033	50628159	50625033	50628159	-	ENST00000395619.3@ARSA	ENST00000395619.3	protein_coding	50627991,50627556,50627166,50626834,50626591,50626154,50625936,50625579,50625033	50628159,50627792,50627406,50627052,50626760,50626278,50626063,50625681,50625464	Gene ID= ENSG00000100299.17 TPM= 6.23 Transcript Type= protein_coding
chr22	50720568	50733210	50720568	50733210	+	transcript2674.chr22.nnic@SHANK3	transcript2674.chr22.nnic	protein_coding	50720568,50733028	50722437,50733210	Gene ID= ENSG00000251322.7 TPM= 3.19 Transcript Type= NA
chr22	50674642	50733210	50674642	50733210	+	ENST00000262795.5@SHANK3	ENST00000262795.5	protein_coding	50674642,50675048,50676622,50678585,50678769,50679019,50679312,50683340,50684585,50694775,50695928,50696904,50697244,50697565,50698690,50703860,50704166,50704738,50704964,50706072,50711615,50714917,50715669,50720184,50730721	50674704,50675251,50676693,50678693,50678920,50679186,50679428,50683417,50684651,50695048,50695932,50696914,50697267,50697715,50698803,50703935,50704248,50704862,50705096,50706152,50711638,50715047,50715753,50722437,50733210	Gene ID= ENSG00000251322.7 TPM= 81.79 Transcript Type= protein_coding
chr22	50721485	50724025	50721485	50724025	+	transcript2676.chr22.nnic@SHANK3	transcript2676.chr22.nnic	protein_coding	50721485,50723398	50722437,50724025	Gene ID= ENSG00000251322.7 TPM= 2.12 Transcript Type= NA
chr22	50783757	50799434	50783757	50799434	+	ENST00000462238.5@RPL23AP82	ENST00000462238.5	transcribed_unprocessed_pseudogene	50783757,50785173,50798655	50783864,50785293,50799434	Gene ID= ENSG00000184319.15 TPM= 5.31 Transcript Type= processed_transcript
chr22	50783770	50799227	50783770	50799227	+	transcript2693.chr22.nic@RPL23AP82	transcript2693.chr22.nic	transcribed_unprocessed_pseudogene	50783770,50785173,50798655	50784021,50785293,50799227	Gene ID= ENSG00000184319.15 TPM= 3.19 Transcript Type= NA
chr22	50767506	50783659	50767506	50783659	-	ENST00000395598.7@RABL2B	ENST00000395598.7	protein_coding	50783501,50782188,50777952,50776670,50775772,50769905,50769455,50769041,50767506	50783659,50782347,50777981,50776749,50775851,50770016,50769549,50769124,50768874	Gene ID= ENSG00000079974.17 TPM= 1.06 Transcript Type= protein_coding
chr22	50767504	50783621	50767504	50783621	-	ENST00000354869.7@RABL2B	ENST00000354869.7	protein_coding	50783501,50782188,50777952,50776670,50775772,50769905,50769455,50769041,50767504	50783621,50782351,50777981,50776749,50775851,50770016,50769552,50769124,50768874	Gene ID= ENSG00000079974.17 TPM= 2.12 Transcript Type= protein_coding
chrM	1	575	1	575	+	transcript45.chrM.nnic@NA	transcript45.chrM.nnic	NA	1	575	Gene ID= novel_gene_chrM_46 TPM= 677.66 Transcript Type= NA
chrM	648	1601	648	1601	+	ENST00000389680.2@MT-RNR1	ENST00000389680.2	Mt_rRNA	648	1601	Gene ID= ENSG00000211459.2 TPM= 1595.37 Transcript Type= Mt_rRNA
chrM	1671	3229	1671	3229	+	ENST00000387347.2@MT-RNR2	ENST00000387347.2	Mt_rRNA	1671	3229	Gene ID= ENSG00000210082.2 TPM= 4538.61 Transcript Type= Mt_rRNA
chrM	2816	3770	2816	3770	+	transcript185.chrM.nnic@NA	transcript185.chrM.nnic	NA	2816	3770	Gene ID= novel_gene_chrM_186 TPM= 159.32 Transcript Type= NA
chrM	3307	4262	3307	4262	+	ENST00000361390.2@MT-ND1	ENST00000361390.2	protein_coding	3307	4262	Gene ID= ENSG00000198888.2 TPM= 1779.12 Transcript Type= protein_coding
chrM	4470	5511	4470	5511	+	ENST00000361453.3@MT-ND2	ENST00000361453.3	protein_coding	4470	5511	Gene ID= ENSG00000198763.3 TPM= 764.76 Transcript Type= protein_coding
chrM	5580	5899	5580	5899	+	transcript37.chrM.nnic@NA	transcript37.chrM.nnic	NA	5580	5899	Gene ID= novel_gene_chrM_38 TPM= 84.97 Transcript Type= NA
chrM	5761	5826	5761	5826	-	ENST00000387405.1@MT-TC	ENST00000387405.1	Mt_tRNA	5761	5826	Gene ID= ENSG00000210140.1 TPM= 3.19 Transcript Type= Mt_tRNA
chrM	5904	7445	5904	7445	+	ENST00000361624.2@MT-CO1	ENST00000361624.2	protein_coding	5904	7445	Gene ID= ENSG00000198804.2 TPM= 1374.44 Transcript Type= protein_coding
chrM	7586	8269	7586	8269	+	ENST00000361739.1@MT-CO2	ENST00000361739.1	protein_coding	7586	8269	Gene ID= ENSG00000198712.1 TPM= 1716.45 Transcript Type= protein_coding
chrM	8271	8766	8271	8766	+	transcript269.chrM.nnic@NA	transcript269.chrM.nnic	NA	8271	8766	Gene ID= novel_gene_chrM_270 TPM= 11.68 Transcript Type= NA
chrM	8366	8572	8366	8572	+	ENST00000361851.1@MT-ATP8	ENST00000361851.1	protein_coding	8366	8572	Gene ID= ENSG00000228253.1 TPM= 8.5 Transcript Type= protein_coding
chrM	8527	9207	8527	9207	+	ENST00000361899.2@MT-ATP6	ENST00000361899.2	protein_coding	8527	9207	Gene ID= ENSG00000198899.2 TPM= 1765.31 Transcript Type= protein_coding
chrM	8861	12137	8861	12137	+	transcript25.chrM.nnic@NA	transcript25.chrM.nnic	NA	8861	12137	Gene ID= novel_gene_chrM_26 TPM= 1615.55 Transcript Type= NA
chrM	9207	9990	9207	9990	+	ENST00000362079.2@MT-CO3	ENST00000362079.2	protein_coding	9207	9990	Gene ID= ENSG00000198938.2 TPM= 4244.39 Transcript Type= protein_coding
chrM	10059	10404	10059	10404	+	ENST00000361227.2@MT-ND3	ENST00000361227.2	protein_coding	10059	10404	Gene ID= ENSG00000198840.2 TPM= 390.88 Transcript Type= protein_coding
chrM	10470	10766	10470	10766	+	ENST00000361335.1@MT-ND4L	ENST00000361335.1	protein_coding	10470	10766	Gene ID= ENSG00000212907.2 TPM= 29.74 Transcript Type= protein_coding
chrM	10760	12137	10760	12137	+	ENST00000361381.2@MT-ND4	ENST00000361381.2	protein_coding	10760	12137	Gene ID= ENSG00000198886.2 TPM= 2664.96 Transcript Type= protein_coding
chrM	12337	14148	12337	14148	+	ENST00000361567.2@MT-ND5	ENST00000361567.2	protein_coding	12337	14148	Gene ID= ENSG00000198786.2 TPM= 231.55 Transcript Type= protein_coding
chrM	12773	15887	12773	15887	+	transcript59.chrM.nnic@NA	transcript59.chrM.nnic	NA	12773	15887	Gene ID= novel_gene_chrM_60 TPM= 123.21 Transcript Type= NA
chrM	14149	14673	14149	14673	-	ENST00000361681.2@MT-ND6	ENST00000361681.2	protein_coding	14149	14673	Gene ID= ENSG00000198695.2 TPM= 82.85 Transcript Type= protein_coding
chrM	14747	15887	14747	15887	+	ENST00000361789.2@MT-CYB	ENST00000361789.2	protein_coding	14747	15887	Gene ID= ENSG00000198727.2 TPM= 1904.45 Transcript Type= protein_coding
chrM	15889	16316	15889	16316	+	transcript309.chrM.nnic@NA	transcript309.chrM.nnic	NA	15889	16316	Gene ID= novel_gene_chrM_310 TPM= 4.25 Transcript Type= NA
chrM	16325	16569	16325	16569	-	transcript335.chrM.nnic@NA	transcript335.chrM.nnic	NA	16325	16569	Gene ID= novel_gene_chrM_336 TPM= 8.5 Transcript Type= NA
chrX	304750	318819	304750	318819	-	ENST00000326153.9@GTPBP6	ENST00000326153.9	protein_coding	318439,316914,315229,314890,314150,312766,311419,307732,307360,304750	318819,317051,315299,315020,314217,312924,311627,307880,307512,305197	Gene ID= ENSG00000178605.13 TPM= 65.85 Transcript Type= protein_coding
chrX	334235	341711	334235	341711	-	ENST00000479438.6@PPP2R3B	ENST00000479438.6	protein_coding	341307,340765,338778,338604,334235	341711,340940,338896,338710,334517	Gene ID= ENSG00000167393.17 TPM= 14.87 Transcript Type= retained_intron
chrX	1336616	1382685	1336616	1382685	+	ENST00000331035.9@IL3RA	ENST00000331035.9	protein_coding	1336616,1341728,1345316,1348431,1352100,1352322,1356221,1358861,1365138,1378659,1381023,1382391	1336926,1341829,1345434,1348545,1352232,1352506,1356336,1358887,1365252,1378764,1381104,1382685	Gene ID= ENSG00000185291.11 TPM= 5.31 Transcript Type= protein_coding
chrX	1386152	1392724	1386152	1392724	-	ENST00000381401.10@SLC25A6	ENST00000381401.10	protein_coding	1391899,1389241,1387279,1386152	1392724,1389727,1387419,1386759	Gene ID= ENSG00000169100.13 TPM= 268.73 Transcript Type= protein_coding
chrX	1403141	1452873	1403141	1452873	-	ENST00000381317.8@ASMTL	ENST00000381317.8	protein_coding	1452748,1442186,1439097,1435694,1435022,1432269,1427734,1425525,1421658,1418982,1417973,1412732,1403141	1452873,1442317,1439144,1435758,1435083,1432377,1428121,1425687,1421842,1419114,1418116,1412854,1403489	Gene ID= ENSG00000169093.15 TPM= 18.06 Transcript Type= protein_coding
chrX	1591593	1602514	1591593	1602514	+	ENST00000313871.8@AKAP17A	ENST00000313871.8	protein_coding	1591593,1593444,1595384,1599192,1600659	1591769,1594224,1595532,1599432,1602514	Gene ID= ENSG00000197976.11 TPM= 36.11 Transcript Type= protein_coding
chrX	1591623	1602502	1591623	1602502	+	ENST00000474361.6@AKAP17A	ENST00000474361.6	protein_coding	1591623,1593444,1595384,1599192,1600138,1600659	1591769,1594224,1595532,1599432,1600207,1602502	Gene ID= ENSG00000197976.11 TPM= 1.06 Transcript Type= nonsense_mediated_decay
chrX	2219516	2500978	2219516	2500978	-	ENST00000334651.10@DHRSX	ENST00000334651.10	protein_coding	2500817,2425197,2408745,2291502,2266740,2243023,2219516	2500978,2425304,2408813,2291603,2266947,2243230,2221229	Gene ID= ENSG00000169084.13 TPM= 16.99 Transcript Type= protein_coding
chrX	2691313	2741290	2691313	2741290	+	ENST00000624481.4@CD99	ENST00000624481.4	protein_coding	2691313,2714422,2717605,2719661,2720356,2722627,2723314,2726260,2738203,2740779	2691427,2714454,2717652,2719705,2720424,2722674,2723364,2726373,2738256,2741290	Gene ID= ENSG00000002586.18 TPM= 33.99 Transcript Type= protein_coding
chrX	2903970	2929351	2903970	2929351	-	ENST00000381154.5@ARSD	ENST00000381154.5	protein_coding	2929232,2925616,2921903,2920601,2917804,2915556,2910659,2909817,2908721,2903970	2929351,2925765,2922024,2920723,2918227,2915692,2910793,2909979,2908842,2907632	Gene ID= ENSG00000006756.15 TPM= 11.68 Transcript Type= protein_coding
chrX	2920381	2929279	2920381	2929279	-	ENST00000494870.5@ARSD	ENST00000494870.5	protein_coding	2929232,2925616,2921903,2920381	2929279,2925765,2922024,2920723	Gene ID= ENSG00000006756.15 TPM= 2.12 Transcript Type= retained_intron
chrX	3308565	3346641	3308565	3346641	-	ENST00000217939.6@MXRA5	ENST00000217939.6	protein_coding	3346515,3343646,3330644,3330018,3320008,3317103,3308565	3346641,3343861,3330773,3330408,3324975,3318003,3311624	Gene ID= ENSG00000101825.7 TPM= 13.81 Transcript Type= protein_coding
chrX	3819654	3824031	3819654	3824031	-	transcript33.chrX.nnic@NA	transcript33.chrX.nnic	NA	3819654	3824031	Gene ID= novel_gene_chrX_34 TPM= 4.25 Transcript Type= NA
chrX	7048920	7148190	7048920	7148190	-	ENST00000381077.9@PUDP	ENST00000381077.9	protein_coding	7148053,7105620,7077220,7048920	7148190,7105838,7077449,7050472	Gene ID= ENSG00000130021.13 TPM= 29.74 Transcript Type= protein_coding
chrX	7147685	7353066	7147685	7353066	+	transcript36.chrX.nnic@STS	transcript36.chrX.nnic	protein_coding	7147685,7190880,7253196,7257242,7257466,7259349,7275951,7305046,7325339,7333986,7349888	7148083,7191008,7253336,7257363,7257588,7259772,7276087,7305183,7325498,7334107,7353066	Gene ID= ENSG00000101846.6 TPM= 6.37 Transcript Type= NA
chrX	7898247	7927443	7898247	7927443	-	ENST00000381042.8@PNPLA4	ENST00000381042.8	protein_coding	7927286,7925940,7922004,7921713,7912028,7901989,7898247	7927443,7926132,7922098,7921848,7912093,7902141,7900817	Gene ID= ENSG00000006757.11 TPM= 2.12 Transcript Type= protein_coding
chrX	7898895	7927728	7898895	7927728	-	transcript45.chrX.nic@PNPLA4	transcript45.chrX.nic	protein_coding	7927671,7925940,7922004,7921713,7912028,7901989,7898895	7927728,7926132,7922098,7921848,7912093,7902141,7900817	Gene ID= ENSG00000006757.11 TPM= 2.12 Transcript Type= NA
chrX	7898763	7927739	7898763	7927739	-	ENST00000444736.5@PNPLA4	ENST00000444736.5	protein_coding	7927686,7925940,7922004,7921713,7912028,7901989,7898763	7927739,7926132,7922098,7921848,7912093,7902141,7900817	Gene ID= ENSG00000006757.11 TPM= 1.06 Transcript Type= protein_coding
chrX	8528874	8732186	8528874	8732186	-	ENST00000262648.7@ANOS1	ENST00000262648.7	protein_coding	8731830,8699698,8623608,8597034,8587794,8585267,8570499,8568232,8553952,8539664,8536771,8535591,8534319,8528874	8732186,8699745,8623670,8597256,8587978,8585396,8570704,8568376,8554098,8539758,8536942,8535811,8534460,8533053	Gene ID= ENSG00000011201.11 TPM= 4.25 Transcript Type= protein_coding
chrX	9465008	9719743	9465008	9719743	+	ENST00000217964.11@TBL1X	ENST00000217964.11	protein_coding	9465008,9501780,9640273,9653545,9654215,9684043,9688017,9691579,9692113,9693149,9693322,9697369,9704993,9709248,9709633,9711611,9714902,9716220	9465447,9501849,9640360,9653689,9654322,9684188,9688275,9691711,9692254,9693212,9693419,9697429,9705114,9709322,9709760,9711776,9715003,9719743	Gene ID= ENSG00000101849.15 TPM= 5.31 Transcript Type= protein_coding
chrX	9465061	9717259	9465061	9717259	+	transcript60.chrX.nic@TBL1X	transcript60.chrX.nic	protein_coding	9465061,9501780,9640273,9654215,9684043,9688017,9691579,9692113,9693149,9693322,9697369,9704993,9709248,9709633,9711611,9714902,9716220	9465447,9501849,9640360,9654322,9684188,9688275,9691711,9692254,9693212,9693419,9697429,9705114,9709322,9709760,9711776,9715003,9717259	Gene ID= ENSG00000101849.15 TPM= 2.12 Transcript Type= NA
chrX	10015247	10019406	10015247	10019406	+	transcript71.chrX.nnic@NA	transcript71.chrX.nnic	NA	10015247	10019406	Gene ID= novel_gene_chrX_72 TPM= 2.12 Transcript Type= NA
chrX	10445310	10620634	10445310	10620634	-	ENST00000317552.8@MID1	ENST00000317552.8	protein_coding	10620290,10566888,10523092,10495584,10482480,10474623,10469697,10459646,10454870,10445310	10620634,10567603,10523187,10495691,10482628,10474750,10469840,10459807,10455077,10449716	Gene ID= ENSG00000101871.14 TPM= 14.87 Transcript Type= protein_coding
chrX	10448108	10620585	10448108	10620585	-	transcript83.chrX.nic@MID1	transcript83.chrX.nic	protein_coding	10620290,10567002,10523092,10495584,10482480,10474623,10469697,10459646,10454870,10448108	10620585,10567603,10523187,10495691,10482628,10474750,10469840,10459807,10455077,10449716	Gene ID= ENSG00000101871.14 TPM= 5.31 Transcript Type= NA
chrX	10493602	10620585	10493602	10620585	-	transcript86.chrX.nic@MID1	transcript86.chrX.nic	protein_coding	10620290,10566888,10523092,10493602	10620585,10567603,10523187,10495691	Gene ID= ENSG00000101871.14 TPM= 2.12 Transcript Type= NA
chrX	10552585	10556120	10552585	10556120	-	transcript88.chrX.nnic@NA	transcript88.chrX.nnic	NA	10552585	10556120	Gene ID= novel_gene_chrX_89 TPM= 2.12 Transcript Type= NA
chrX	11111301	11123078	11111301	11123078	+	ENST00000321143.8@HCCS	ENST00000321143.8	protein_coding	11111301,11112019,11114835,11117267,11118501,11120907,11121612	11111460,11112160,11114986,11117415,11118620,11120993,11123078	Gene ID= ENSG00000004961.14 TPM= 3.72 Transcript Type= protein_coding
chrX	11111297	11123082	11111297	11123082	+	transcript101.chrX.nnic@HCCS	transcript101.chrX.nnic	protein_coding	11111297,11112019,11114835,11117267,11118501,11121612	11111518,11112160,11114986,11117415,11118620,11123082	Gene ID= ENSG00000004961.14 TPM= 4.78 Transcript Type= NA
chrX	11111365	11121879	11111365	11121879	+	ENST00000380762.4@HCCS	ENST00000380762.4	protein_coding	11111365,11112019,11114835,11117267,11118501,11120907,11121612	11111518,11112160,11114986,11117415,11118620,11120993,11121879	Gene ID= ENSG00000004961.14 TPM= 22.31 Transcript Type= protein_coding
chrX	11137543	11427773	11137543	11427773	-	ENST00000380736.5@ARHGAP6	ENST00000380736.5	protein_coding	11427548,11254548,11196925,11188728,11186236,11182063,11179302,11178100,11169505,11156529,11143980,11142233,11137543	11427773,11254707,11196996,11188984,11186431,11182118,11179452,11178248,11169684,11156626,11144248,11142313,11139530	Gene ID= ENSG00000047648.21 TPM= 6.37 Transcript Type= protein_coding
chrX	11758159	11775753	11758159	11775753	+	ENST00000312196.8@MSL3	ENST00000312196.8	protein_coding	11758159,11759793,11760403,11760837,11761500,11762130,11762837,11763780,11765467,11768573,11772156,11772621,11774980	11758365,11759875,11760498,11760937,11761582,11762252,11762997,11763938,11765729,11768682,11772255,11772705,11775753	Gene ID= ENSG00000005302.17 TPM= 9.21 Transcript Type= protein_coding
chrX	11759635	11775751	11759635	11775751	+	transcript104.chrX.nic@MSL3	transcript104.chrX.nic	protein_coding	11759635,11759793,11760403,11760837,11761500,11762130,11762837,11763780,11765467,11768573,11772156,11772621,11774980	11759712,11759875,11760498,11760937,11761582,11762252,11762997,11763938,11765729,11768682,11772255,11772705,11775751	Gene ID= ENSG00000005302.17 TPM= 2.84 Transcript Type= NA
chrX	11759552	11775751	11759552	11775751	+	ENST00000380693.7@MSL3	ENST00000380693.7	protein_coding	11759552,11760403,11760837,11761500,11762130,11762837,11763780,11765467,11768573,11772156,11772621,11774980	11759875,11760498,11760937,11761582,11762252,11762997,11763938,11765729,11768682,11772255,11772705,11775751	Gene ID= ENSG00000005302.17 TPM= 2.84 Transcript Type= protein_coding
chrX	11758237	11767977	11758237	11767977	+	ENST00000337339.6@MSL3	ENST00000337339.6	protein_coding	11758237,11759793,11760403,11760837,11761500,11762130,11762837,11763780,11765467	11758365,11759875,11760498,11760937,11761582,11762252,11762997,11763938,11767977	Gene ID= ENSG00000005302.17 TPM= 3.19 Transcript Type= protein_coding
chrX	12975108	12977227	12975108	12977227	+	ENST00000451311.6@TMSB4X	ENST00000451311.6	protein_coding	12975108,12976246,12976777	12975168,12976361,12977227	Gene ID= ENSG00000205542.10 TPM= 540.11 Transcript Type= protein_coding
chrX	12975110	12977226	12975110	12977226	+	ENST00000380636.1@TMSB4X	ENST00000380636.1	protein_coding	12975110,12976777	12976361,12977226	Gene ID= ENSG00000205542.10 TPM= 3.19 Transcript Type= protein_coding
chrX	12975244	12977227	12975244	12977227	+	ENST00000380635.5@TMSB4X	ENST00000380635.5	protein_coding	12975244,12976246,12976777	12975443,12976361,12977227	Gene ID= ENSG00000205542.10 TPM= 13.28 Transcript Type= protein_coding
chrX	13712244	13734635	13712244	13734635	-	ENST00000359680.9@TRAPPC2	ENST00000359680.9	protein_coding	13734525,13719871,13716534,13716004,13712244	13734635,13719982,13716678,13716089,13714505	Gene ID= ENSG00000196459.13 TPM= 11.15 Transcript Type= protein_coding
chrX	13712247	13734556	13712247	13734556	-	ENST00000380579.5@TRAPPC2	ENST00000380579.5	protein_coding	13734525,13734044,13719871,13716534,13716004,13712247	13734556,13734185,13719982,13716678,13716089,13714505	Gene ID= ENSG00000196459.13 TPM= 3.72 Transcript Type= protein_coding
chrX	13714358	13734575	13714358	13734575	-	ENST00000458511.6@TRAPPC2	ENST00000458511.6	protein_coding	13734525,13734050,13719871,13716534,13716004,13714358	13734575,13734185,13719982,13716678,13716089,13714505	Gene ID= ENSG00000196459.13 TPM= 1.06 Transcript Type= protein_coding
chrX	13734736	13746813	13734736	13746813	+	transcript153.chrX.nic@OFD1	transcript153.chrX.nic	protein_coding	13734736,13735248,13736478,13738846,13739002,13744415,13746319,13746780	13735083,13735346,13736678,13738914,13739032,13744519,13746455,13746813	Gene ID= ENSG00000046651.14 TPM= 3.19 Transcript Type= NA
chrX	14008673	14029916	14008673	14029916	-	transcript162.chrX.nic@GEMIN8	transcript162.chrX.nic	protein_coding	14029777,14026140,14021464,14020078,14008673	14029916,14026221,14021511,14020534,14009169	Gene ID= ENSG00000046647.13 TPM= 11.68 Transcript Type= NA
chrX	14008673	14029892	14008673	14029892	-	transcript164.chrX.nic@GEMIN8	transcript164.chrX.nic	protein_coding	14026140,14021464,14020078,14008673	14029892,14021511,14020534,14009169	Gene ID= ENSG00000046647.13 TPM= 2.12 Transcript Type= NA
chrX	15281463	15282464	15281463	15282464	-	transcript179.chrX.nnic@NA	transcript179.chrX.nnic	NA	15281463	15282464	Gene ID= novel_gene_chrX_180 TPM= 3.19 Transcript Type= NA
chrX	15319457	15335554	15319457	15335554	-	ENST00000635598.1@PIGA	ENST00000635598.1	protein_coding	15335501,15331590,15325914,15325020,15324665,15319457	15335554,15331992,15326046,15325152,15324871,15321772	Gene ID= ENSG00000165195.15 TPM= 2.12 Transcript Type= nonsense_mediated_decay
chrX	15345591	15384376	15345591	15384376	-	ENST00000297904.3@VEGFD	ENST00000297904.3	protein_coding	15383857,15363109,15358003,15355150,15353068,15347164,15345591	15384376,15363319,15358193,15355298,15353168,15347359,15346259	Gene ID= ENSG00000165197.4 TPM= 1.06 Transcript Type= protein_coding
chrX	15384799	15493564	15384799	15493564	-	ENST00000380421.3@PIR	ENST00000380421.3	protein_coding	15493156,15491162,15479729,15459657,15455848,15425906,15407506,15397449,15390185,15384799	15493564,15491309,15479821,15459740,15456054,15425990,15407550,15397531,15390251,15385116	Gene ID= ENSG00000087842.10 TPM= 3.19 Transcript Type= protein_coding
chrX	15384799	15493341	15384799	15493341	-	ENST00000380420.9@PIR	ENST00000380420.9	protein_coding	15493190,15491162,15479729,15459657,15455848,15425906,15407506,15397449,15390185,15384799	15493341,15491309,15479821,15459740,15456054,15425990,15407550,15397531,15390251,15385116	Gene ID= ENSG00000087842.10 TPM= 14.87 Transcript Type= protein_coding
chrX	15500829	15556529	15500829	15556529	+	ENST00000348343.10@BMX	ENST00000348343.10	protein_coding	15500829,15508345,15509329,15511437,15516112,15517929,15522346,15525288,15526042,15529973,15531328,15534212,15536353,15537134,15541982,15543071,15546803,15549840,15556073	15500940,15508491,15509433,15511518,15516231,15517993,15522587,15525365,15526095,15530027,15531407,15534339,15536427,15537305,15542198,15543135,15546921,15549997,15556529	Gene ID= ENSG00000102010.14 TPM= 1.06 Transcript Type= protein_coding
chrX	15494290	15600994	15494290	15600994	-	transcript190.chrX.nnic@ACE2	transcript190.chrX.nnic	protein_coding	15600726,15594845,15592229,15591713,15589344,15587753,15585475,15581221,15578089,15575666,15573367,15572201,15571624,15570295,15567726,15566253,15564024,15494290	15600994,15595003,15592322,15591856,15589456,15587858,15585572,15581390,15578315,15575810,15573465,15572323,15571796,15570353,15567826,15566369,15564218,15494849	Gene ID= ENSG00000130234.10 TPM= 4.25 Transcript Type= NA
chrX	15561033	15600994	15561033	15600994	-	transcript197.chrX.nnic@ACE2	transcript197.chrX.nnic	protein_coding	15600726,15594845,15592229,15591713,15589344,15587753,15585475,15581221,15578089,15575666,15573367,15572201,15566253,15564024,15561033	15600994,15595003,15592322,15591856,15589456,15587858,15585572,15581390,15578315,15575810,15573465,15572323,15566369,15564218,15562013	Gene ID= ENSG00000130234.10 TPM= 42.49 Transcript Type= NA
chrX	15557104	15560948	15557104	15560948	-	transcript200.chrX.nnic@NA	transcript200.chrX.nnic	NA	15557104	15560948	Gene ID= novel_gene_chrX_201 TPM= 5.31 Transcript Type= NA
chrX	15790462	15828321	15790462	15828321	+	transcript216.chrX.nnic@ZRSR2	transcript216.chrX.nnic	protein_coding	15790462,15790934,15799872,15803688,15804111,15808233,15809200,15815677,15818587,15820207,15822731,15824242,15827189	15790536,15791013,15799953,15803796,15804197,15808271,15809318,15815890,15818642,15820316,15823201,15824372,15828321	Gene ID= ENSG00000169249.12 TPM= 3.19 Transcript Type= NA
chrX	15790462	15823260	15790462	15823260	+	transcript220.chrX.nnic@ZRSR2	transcript220.chrX.nnic	protein_coding	15790462,15790934,15799883,15803688,15804111,15808233,15809200,15815677,15818587,15820207,15822731	15790536,15791013,15799953,15803796,15804197,15808271,15809318,15815890,15818642,15820316,15823260	Gene ID= ENSG00000169249.12 TPM= 2.12 Transcript Type= NA
chrX	15790472	15823260	15790472	15823260	+	ENST00000307771.7@ZRSR2	ENST00000307771.7	protein_coding	15790472,15790934,15799872,15803688,15804111,15808233,15809200,15815677,15818587,15820207,15822731	15790536,15791013,15799953,15803796,15804197,15808271,15809318,15815890,15818642,15820316,15823260	Gene ID= ENSG00000169249.12 TPM= 27.62 Transcript Type= protein_coding
chrX	15825809	15854876	15825809	15854876	-	transcript225.chrX.nic@AP1S2	transcript225.chrX.nic	protein_coding	15854688,15852346,15845903,15845379,15840497,15825809	15854876,15852524,15846011,15845516,15840591,15827372	Gene ID= ENSG00000182287.14 TPM= 32.08 Transcript Type= NA
chrX	15830059	15854828	15830059	15854828	-	transcript238.chrX.nic@AP1S2	transcript238.chrX.nic	protein_coding	15854688,15852346,15845903,15845379,15830059	15854828,15852524,15846011,15845516,15831568	Gene ID= ENSG00000182287.14 TPM= 11.9 Transcript Type= NA
chrX	15830059	15854804	15830059	15854804	-	ENST00000380291.5@AP1S2	ENST00000380291.5	protein_coding	15854688,15852346,15845903,15845379,15830059	15854804,15852524,15846011,15845516,15833007	Gene ID= ENSG00000182287.14 TPM= 1.06 Transcript Type= protein_coding
chrX	15826067	15829449	15826067	15829449	-	transcript246.chrX.nnic@NA	transcript246.chrX.nnic	NA	15826067	15829449	Gene ID= novel_gene_chrX_247 TPM= 3.19 Transcript Type= NA
chrX	15855370	15855838	15855370	15855838	+	transcript248.chrX.nnic@NA	transcript248.chrX.nnic	NA	15855370	15855838	Gene ID= novel_gene_chrX_249 TPM= 2.12 Transcript Type= NA
chrX	16588306	16712652	16588306	16712652	-	ENST00000359276.8@CTPS2	ENST00000359276.8	protein_coding	16712335,16702737,16698923,16698236,16693371,16693141,16691540,16689450,16683094,16678362,16670580,16667662,16667514,16639147,16620277,16617150,16609541,16590752,16588306	16712652,16702941,16699093,16698336,16693487,16693224,16691620,16689601,16683226,16678450,16670674,16667724,16667557,16639243,16620332,16617246,16609685,16590862,16589775	Gene ID= ENSG00000047230.14 TPM= 2.12 Transcript Type= protein_coding
chrX	16589549	16712692	16589549	16712692	-	transcript254.chrX.nnic@CTPS2	transcript254.chrX.nnic	protein_coding	16712558,16702737,16698923,16698236,16693371,16693141,16691540,16689450,16683094,16678362,16670580,16667662,16667514,16639147,16620277,16617150,16609541,16590752,16589549	16712692,16702941,16699093,16698336,16693487,16693224,16691620,16689601,16683226,16678450,16670674,16667724,16667557,16639243,16620332,16617246,16609685,16590862,16589775	Gene ID= ENSG00000047230.14 TPM= 2.12 Transcript Type= NA
chrX	16719641	16735306	16719641	16735306	+	transcript268.chrX.nic@SYAP1	transcript268.chrX.nic	protein_coding	16719641,16735227	16719899,16735306	Gene ID= ENSG00000169895.5 TPM= 3.19 Transcript Type= NA
chrX	16719632	16765336	16719632	16765336	+	ENST00000380155.3@SYAP1	ENST00000380155.3	protein_coding	16719632,16735227,16736166,16741716,16743701,16754945,16756663,16757162,16760232	16719899,16735345,16736232,16741789,16743840,16755093,16756721,16757309,16765336	Gene ID= ENSG00000169895.5 TPM= 18.06 Transcript Type= protein_coding
chrX	16786410	16837685	16786410	16837685	+	transcript282.chrX.nic@TXLNG	transcript282.chrX.nic	protein_coding	16786410,16818574,16820164,16828094,16829576,16832623,16834283,16837593	16786589,16818877,16820255,16828264,16829770,16832742,16834357,16837685	Gene ID= ENSG00000086712.12 TPM= 3.19 Transcript Type= NA
chrX	16786427	16844519	16786427	16844519	+	ENST00000380122.9@TXLNG	ENST00000380122.9	protein_coding	16786427,16818574,16820164,16828094,16829576,16832623,16834283,16837593,16839821,16841428	16786589,16818877,16820255,16828264,16829770,16832742,16834357,16837685,16839916,16844519	Gene ID= ENSG00000086712.12 TPM= 5.31 Transcript Type= protein_coding
chrX	16804987	16806390	16804987	16806390	-	transcript284.chrX.nnic@NA	transcript284.chrX.nnic	NA	16804987	16806390	Gene ID= novel_gene_chrX_285 TPM= 7.44 Transcript Type= NA
chrX	16844690	16870361	16844690	16870361	-	ENST00000404022.5@RBBP7	ENST00000404022.5	protein_coding	16870038,16869076,16862955,16858676,16857594,16853682,16852749,16852551,16852046,16849244,16845828,16844690	16870361,16869220,16863100,16858822,16857709,16853842,16852875,16852628,16852122,16849301,16845938,16845103	Gene ID= ENSG00000102054.17 TPM= 225.18 Transcript Type= protein_coding
chrX	16844654	16869886	16844654	16869886	-	ENST00000380084.8@RBBP7	ENST00000380084.8	protein_coding	16869494,16869076,16862955,16858676,16857594,16853682,16852749,16852551,16852046,16849244,16845828,16844654	16869886,16869220,16863100,16858849,16857709,16853842,16852875,16852628,16852122,16849301,16845938,16845103	Gene ID= ENSG00000102054.17 TPM= 10.97 Transcript Type= protein_coding
chrX	17521368	17524494	17521368	17524494	-	transcript286.chrX.nnic@NA	transcript286.chrX.nnic	NA	17521368	17524494	Gene ID= novel_gene_chrX_287 TPM= 2.12 Transcript Type= NA
chrX	17607905	17612380	17607905	17612380	-	transcript288.chrX.nnic@NA	transcript288.chrX.nnic	NA	17607905	17612380	Gene ID= novel_gene_chrX_289 TPM= 2.12 Transcript Type= NA
chrX	17737468	17754985	17737468	17754985	+	ENST00000380045.7@SCML1	ENST00000380045.7	protein_coding	17737468,17746018,17749400,17749894,17751815,17753258	17737680,17746098,17749504,17750293,17751966,17754985	Gene ID= ENSG00000047634.14 TPM= 3.19 Transcript Type= protein_coding
chrX	17800052	17861067	17800052	17861067	-	transcript297.chrX.nnic@RAI2	transcript297.chrX.nnic	protein_coding	17860509,17800052	17861067,17802034	Gene ID= ENSG00000131831.17 TPM= 47.98 Transcript Type= NA
chrX	17800343	17860893	17800343	17860893	-	transcript298.chrX.nnic@RAI2	transcript298.chrX.nnic	protein_coding	17860509,17800343	17860893,17802034	Gene ID= ENSG00000131831.17 TPM= 4.43 Transcript Type= NA
chrX	17800051	17861337	17800051	17861337	-	ENST00000451717.5@RAI2	ENST00000451717.5	protein_coding	17861098,17800051	17861337,17802034	Gene ID= ENSG00000131831.17 TPM= 17.71 Transcript Type= protein_coding
chrX	18425583	18653625	18425583	18653625	+	ENST00000379996.7@CDKL5	ENST00000379996.7	protein_coding	18425583,18506935,18510820,18564477,18575354,18579848,18581891,18584263,18587954,18595348,18598462,18603902,18608811,18609465,18613152,18619867,18625128,18628371,18646007,18650410,18653432	18425695,18507160,18510854,18564522,18575490,18579968,18581950,18584353,18588143,18595428,18598613,18604868,18608912,18609570,18613275,18619966,18625247,18628587,18646090,18650592,18653625	Gene ID= ENSG00000008086.11 TPM= 2.12 Transcript Type= protein_coding
chrX	18631960	18635392	18631960	18635392	+	transcript300.chrX.nnic@NA	transcript300.chrX.nnic	NA	18631960	18635392	Gene ID= novel_gene_chrX_301 TPM= 5.31 Transcript Type= NA
chrX	19343893	19361705	19343893	19361705	+	ENST00000379806.9@PDHA1	ENST00000379806.9	protein_coding	19343893,19346510,19349312,19349937,19351281,19353082,19354491,19355349,19355686,19357652,19358916,19359489	19344094,19346623,19349371,19350110,19351407,19353173,19354583,19355504,19355757,19357719,19359024,19361705	Gene ID= ENSG00000131828.13 TPM= 16.59 Transcript Type= protein_coding
chrX	19343933	19361685	19343933	19361685	+	ENST00000422285.6@PDHA1	ENST00000422285.6	protein_coding	19343933,19349312,19349937,19351281,19353082,19354491,19355349,19355686,19357652,19358916,19359489	19344094,19349371,19350110,19351407,19353173,19354583,19355504,19355757,19357719,19359024,19361685	Gene ID= ENSG00000131828.13 TPM= 173.26 Transcript Type= protein_coding
chrX	19343893	19361705	19343893	19361705	+	ENST00000540249.5@PDHA1	ENST00000540249.5	protein_coding	19343893,19349312,19349937,19351281,19353082,19355349,19355686,19357652,19358916,19359489	19344094,19349371,19350110,19351407,19353173,19355504,19355757,19357719,19359024,19361705	Gene ID= ENSG00000131828.13 TPM= 16.73 Transcript Type= protein_coding
chrX	19592068	19887650	19592068	19887650	-	transcript355.chrX.nnic@SH3KBP1	transcript355.chrX.nnic	protein_coding	19887307,19836125,19746318,19706881,19695612,19683823,19645400,19631864,19607938,19594949,19592068	19887650,19836282,19746443,19706984,19695743,19684028,19645475,19631958,19608045,19595000,19592147	Gene ID= ENSG00000147010.17 TPM= 22.31 Transcript Type= NA
chrX	19535407	19569510	19535407	19569510	-	transcript356.chrX.nic@SH3KBP1	transcript356.chrX.nic	protein_coding	19569103,19549974,19545922,19541925,19537717,19535407	19569510,19550083,19546050,19542193,19537780,19536458	Gene ID= ENSG00000147010.17 TPM= 5.31 Transcript Type= NA
chrX	19916258	19991061	19916258	19991061	-	transcript364.chrX.nnic@BCLAF3	transcript364.chrX.nnic	protein_coding	19990908,19970224,19966080,19965044,19955391,19953778,19952988,19950753,19937418,19935809,19929785,19916258	19991061,19970298,19966649,19965706,19955566,19953892,19953051,19950868,19937532,19935898,19929940,19917334	Gene ID= ENSG00000173681.16 TPM= 2.12 Transcript Type= NA
chrX	20124518	20141844	20124518	20141844	-	ENST00000379607.9@EIF1AX	ENST00000379607.9	protein_coding	20141625,20138539,20135738,20133957,20132182,20130516,20124518	20141844,20138622,20135841,20134007,20132263,20130607,20128311	Gene ID= ENSG00000173674.10 TPM= 9.56 Transcript Type= protein_coding
chrX	21654599	21658503	21654599	21658503	-	transcript404.chrX.nnic@NA	transcript404.chrX.nnic	NA	21654599	21658503	Gene ID= novel_gene_chrX_405 TPM= 5.31 Transcript Type= NA
chrX	21730733	21758111	21730733	21758111	-	transcript413.chrX.nic@SMPX	transcript413.chrX.nic	protein_coding	21757942,21754246,21743750,21737549,21730733	21758111,21754302,21743836,21737697,21733757	Gene ID= ENSG00000091482.5 TPM= 7.44 Transcript Type= NA
chrX	21705972	21758163	21705972	21758163	-	ENST00000379494.3@SMPX	ENST00000379494.3	protein_coding	21757942,21754246,21743750,21737549,21705972	21758163,21754302,21743836,21737697,21706394	Gene ID= ENSG00000091482.5 TPM= 344.14 Transcript Type= protein_coding
chrX	21727287	21729774	21727287	21729774	-	transcript419.chrX.nnic@NA	transcript419.chrX.nnic	NA	21727287	21729774	Gene ID= novel_gene_chrX_420 TPM= 2.12 Transcript Type= NA
chrX	21839588	21885424	21839588	21885424	+	transcript426.chrX.nnic@MBTPS2	transcript426.chrX.nnic	protein_coding	21839588,21843170,21845171,21851509,21853376,21878042,21878497,21880897,21882433	21839809,21843318,21845384,21851612,21853503,21878136,21878692,21880972,21885424	Gene ID= ENSG00000012174.11 TPM= 2.12 Transcript Type= NA
chrX	21839636	21885424	21839636	21885424	+	ENST00000379484.9@MBTPS2	ENST00000379484.9	protein_coding	21839636,21843170,21845171,21851509,21853376,21868467,21869498,21878042,21878497,21880897,21882433	21839809,21843318,21845384,21851612,21853503,21868585,21869678,21878136,21878692,21880972,21885424	Gene ID= ENSG00000012174.11 TPM= 16.99 Transcript Type= protein_coding
chrX	21940997	21994835	21940997	21994835	+	transcript433.chrX.nic@SMS	transcript433.chrX.nic	protein_coding	21940997,21967196,21971897,21972507,21977061,21977960,21978877,21984304,21985144,21992597,21994312	21941367,21967316,21971990,21972571,21977236,21978114,21978966,21984418,21985223,21992712,21994835	Gene ID= ENSG00000102172.15 TPM= 4.25 Transcript Type= NA
chrX	21940573	21994835	21940573	21994835	+	ENST00000404933.6@SMS	ENST00000404933.6	protein_coding	21940573,21967196,21971897,21972507,21977061,21977960,21978877,21984304,21985144,21992597,21994312	21940873,21967316,21971990,21972571,21977236,21978114,21978966,21984418,21985223,21992712,21994835	Gene ID= ENSG00000102172.15 TPM= 130.65 Transcript Type= protein_coding
chrX	23667446	23686399	23667446	23686399	+	ENST00000379341.8@PRDX4	ENST00000379341.8	protein_coding	23667446,23671529,23674990,23679165,23682396,23683671,23686285	23667811,23671646,23675106,23679287,23682526,23683705,23686399	Gene ID= ENSG00000123131.12 TPM= 100.91 Transcript Type= protein_coding
chrX	23701055	23743257	23701055	23743257	-	transcript443.chrX.nnic@ACOT9	transcript443.chrX.nnic	protein_coding	23743125,23735919,23734341,23733172,23730816,23730527,23722670,23721881,23713135,23707877,23706628,23705768,23705509,23704993,23704694,23703617,23701055	23743257,23736016,23734367,23733217,23730986,23730564,23722753,23721984,23713208,23707944,23706739,23705858,23705594,23705080,23704844,23703982,23701813	Gene ID= ENSG00000123130.16 TPM= 3.19 Transcript Type= NA
chrX	23702253	23743273	23702253	23743273	-	ENST00000379303.9@ACOT9	ENST00000379303.9	protein_coding	23743125,23735919,23734341,23733172,23730816,23730527,23722670,23721881,23713135,23707877,23706628,23705768,23705509,23704993,23704694,23702253	23743273,23736016,23734367,23733217,23730986,23730564,23722753,23721984,23713208,23707944,23706739,23705858,23705594,23705080,23704844,23703982	Gene ID= ENSG00000123130.16 TPM= 9.56 Transcript Type= protein_coding
chrX	23703671	23743276	23703671	23743276	-	ENST00000336430.11@ACOT9	ENST00000336430.11	protein_coding	23743125,23735919,23733172,23730816,23730527,23722670,23721881,23713135,23707877,23706628,23705768,23705509,23704993,23704694,23703671	23743276,23736016,23733217,23730986,23730564,23722753,23721984,23713208,23707944,23706739,23705858,23705594,23705080,23704844,23703982	Gene ID= ENSG00000123130.16 TPM= 15.4 Transcript Type= protein_coding
chrX	23783173	23786226	23783173	23786226	+	ENST00000379270.4@SAT1	ENST00000379270.4	protein_coding	23783173,23783658,23783800,23785328,23785520,23785686	23783417,23783709,23783883,23785429,23785560,23786226	Gene ID= ENSG00000130066.16 TPM= 142.33 Transcript Type= protein_coding
chrX	23783171	23786210	23783171	23786210	+	transcript467.chrX.nic@SAT1	transcript467.chrX.nic	protein_coding	23783171,23783658,23783800,23785520,23785686	23783417,23783709,23785429,23785560,23786210	Gene ID= ENSG00000130066.16 TPM= 42.49 Transcript Type= NA
chrX	23783173	23784411	23783173	23784411	+	ENST00000379253.7@SAT1	ENST00000379253.7	protein_coding	23783173,23783658,23783800	23783417,23783709,23784411	Gene ID= ENSG00000130066.16 TPM= 4.25 Transcript Type= protein_coding
chrX	23783197	23786210	23783197	23786210	+	ENST00000489394.5@SAT1	ENST00000489394.5	protein_coding	23783197,23783658,23783800,23784294,23785328,23785520,23785686	23783417,23783709,23783883,23784403,23785429,23785560,23786210	Gene ID= ENSG00000130066.16 TPM= 13.81 Transcript Type= processed_transcript
chrX	23833360	23907960	23833360	23907960	-	transcript476.chrX.nic@APOO	transcript476.chrX.nic	protein_coding	23907694,23880845,23878915,23874403,23868593,23858642,23856302,23840313,23833360	23907960,23880952,23879034,23874457,23868688,23858733,23856382,23840377,23833510	Gene ID= ENSG00000184831.13 TPM= 35.05 Transcript Type= NA
chrX	23833353	23907934	23833353	23907934	-	ENST00000379226.8@APOO	ENST00000379226.8	protein_coding	23907694,23880845,23878915,23874403,23868593,23858642,23856302,23840313,23833353	23907934,23880952,23879034,23874457,23868688,23858733,23856382,23840377,23833612	Gene ID= ENSG00000184831.13 TPM= 37.18 Transcript Type= protein_coding
chrX	23983720	24025333	23983720	24025333	-	transcript480.chrX.nic@KLHL15	transcript480.chrX.nic	protein_coding	24024857,24005989,23983720	24025333,24006700,23989030	Gene ID= ENSG00000174010.9 TPM= 5.31 Transcript Type= NA
chrX	24054716	24077971	24054716	24077971	+	ENST00000253039.8@EIF2S3	ENST00000253039.8	protein_coding	24054716,24055615,24057421,24057633,24060088,24062416,24064201,24065998,24067964,24071558,24073091,24076722	24055037,24055678,24057548,24057754,24060182,24062574,24064335,24066092,24068108,24071727,24073263,24077971	Gene ID= ENSG00000130741.10 TPM= 172.07 Transcript Type= protein_coding
chrX	24073651	24074630	24073651	24074630	-	transcript497.chrX.nnic@NA	transcript497.chrX.nnic	NA	24073651	24074630	Gene ID= novel_gene_chrX_498 TPM= 4.25 Transcript Type= NA
chrX	24074848	24075709	24074848	24075709	-	transcript493.chrX.nnic@NA	transcript493.chrX.nnic	NA	24074848	24075709	Gene ID= novel_gene_chrX_494 TPM= 16.99 Transcript Type= NA
chrX	24149525	24208997	24149525	24208997	+	transcript504.chrX.nic@ZFX	transcript504.chrX.nic	protein_coding	24149525,24151691,24152720,24172715,24173607,24179183,24207326,24207712,24208218,24208900	24149794,24151800,24152830,24172800,24173723,24179770,24207475,24207855,24208370,24208997	Gene ID= ENSG00000005889.15 TPM= 2.47 Transcript Type= NA
chrX	24149283	24208997	24149283	24208997	+	transcript506.chrX.nic@ZFX	transcript506.chrX.nic	protein_coding	24149283,24151691,24152720,24172715,24179183,24207326,24207712,24208218,24208900	24149794,24151800,24152830,24172800,24179770,24207475,24207855,24208370,24208997	Gene ID= ENSG00000005889.15 TPM= 3.54 Transcript Type= NA
chrX	24149355	24208997	24149355	24208997	+	transcript511.chrX.nic@ZFX	transcript511.chrX.nic	protein_coding	24149355,24172715,24179183,24207326,24207712,24208218,24208900	24149794,24172800,24179770,24207475,24207855,24208370,24208997	Gene ID= ENSG00000005889.15 TPM= 5.66 Transcript Type= NA
chrX	24156662	24158718	24156662	24158718	-	transcript516.chrX.nnic@NA	transcript516.chrX.nnic	NA	24156662	24158718	Gene ID= novel_gene_chrX_517 TPM= 6.37 Transcript Type= NA
chrX	24161675	24162851	24161675	24162851	-	transcript518.chrX.nnic@NA	transcript518.chrX.nnic	NA	24161675	24162851	Gene ID= novel_gene_chrX_519 TPM= 4.25 Transcript Type= NA
chrX	24465221	24534425	24465221	24534425	+	ENST00000379162.8@PDK3	ENST00000379162.8	protein_coding	24465221,24494742,24498829,24503327,24505209,24518933,24526198,24527574,24528076,24531657,24533929	24465561,24494883,24498900,24503511,24505298,24519010,24526274,24527675,24528186,24531770,24534425	Gene ID= ENSG00000067992.12 TPM= 4.25 Transcript Type= protein_coding
chrX	24545516	24550466	24545516	24550466	+	ENST00000568479.1@AC004656.1	ENST00000568479.1	sense_overlapping	24545516	24550466	Gene ID= ENSG00000260822.1 TPM= 6.37 Transcript Type= sense_overlapping
chrX	28587399	29956723	28587399	29956723	+	ENST00000378993.5@IL1RAPL1	ENST00000378993.5	protein_coding	28587399,28789320,29282938,29396258,29399155,29668430,29917464,29919949,29941651,29954522,29955102	28588047,28789425,29283217,29396444,29399308,29668504,29917596,29920094,29941794,29954692,29956723	Gene ID= ENSG00000169306.9 TPM= 2.12 Transcript Type= protein_coding
chrX	30653359	30731456	30653359	30731456	+	ENST00000427190.5@GK	ENST00000427190.5	protein_coding	30653359,30665511,30668012,30677375,30691123,30694400,30696042,30696617,30697732,30700414,30700838,30707556,30708054,30718538,30719419,30720011,30720621,30720852,30724101,30727466,30728732	30653615,30665584,30668118,30677452,30691199,30694537,30696151,30696683,30697749,30700449,30700905,30707598,30708134,30718616,30719515,30720095,30720741,30720995,30724181,30727552,30731456	Gene ID= ENSG00000198814.12 TPM= 1.06 Transcript Type= protein_coding
chrX	30827940	30889295	30827940	30889295	-	transcript563.chrX.nic@TAB3	transcript563.chrX.nic	protein_coding	30889114,30871699,30867465,30867115,30859487,30854116,30852778,30846551,30842966,30834051,30827940	30889295,30871801,30867549,30867218,30859678,30855562,30852938,30846644,30843049,30834152,30831575	Gene ID= ENSG00000157625.15 TPM= 4.25 Transcript Type= NA
chrX	31119228	31266953	31119228	31266953	-	transcript568.chrX.nic@DMD	transcript568.chrX.nic	protein_coding	31266810,31260955,31223047,31209498,31206582,31203961,31182738,31180370,31178669,31173539,31172348,31169443,31147275,31146291,31134102,31126642,31119228	31266953,31261016,31223121,31209699,31206667,31204118,31182904,31180481,31178805,31173604,31172413,31169601,31147518,31146414,31134194,31126673,31121930	Gene ID= ENSG00000198947.15 TPM= 15.93 Transcript Type= NA
chrX	31119219	31266952	31119219	31266952	-	ENST00000378723.7@DMD	ENST00000378723.7	protein_coding	31266810,31260955,31223047,31209498,31206582,31203961,31182738,31180370,31178669,31177932,31173539,31172348,31169443,31147275,31146291,31134102,31119219	31266952,31261016,31223121,31209699,31206667,31204118,31182904,31180481,31178805,31177970,31173604,31172413,31169601,31147518,31146414,31134194,31121930	Gene ID= ENSG00000198947.15 TPM= 8.5 Transcript Type= protein_coding
chrX	31158343	31162376	31158343	31162376	+	transcript580.chrX.nnic@NA	transcript580.chrX.nnic	NA	31158343	31162376	Gene ID= novel_gene_chrX_581 TPM= 10.62 Transcript Type= NA
chrX	32121715	32124977	32121715	32124977	+	transcript582.chrX.nnic@NA	transcript582.chrX.nnic	NA	32121715	32124977	Gene ID= novel_gene_chrX_583 TPM= 3.19 Transcript Type= NA
chrX	32137531	32141281	32137531	32141281	+	transcript584.chrX.nnic@NA	transcript584.chrX.nnic	NA	32137531	32141281	Gene ID= novel_gene_chrX_585 TPM= 2.12 Transcript Type= NA
chrX	32160211	32162268	32160211	32162268	-	transcript586.chrX.nnic@NA	transcript586.chrX.nnic	NA	32160211	32162268	Gene ID= novel_gene_chrX_587 TPM= 2.12 Transcript Type= NA
chrX	32187772	32190391	32187772	32190391	-	transcript588.chrX.nnic@NA	transcript588.chrX.nnic	NA	32187772	32190391	Gene ID= novel_gene_chrX_589 TPM= 2.12 Transcript Type= NA
chrX	32195053	32197009	32195053	32197009	+	transcript590.chrX.nnic@NA	transcript590.chrX.nnic	NA	32195053	32197009	Gene ID= novel_gene_chrX_591 TPM= 18.06 Transcript Type= NA
chrX	32565853	33211552	32565853	33211552	-	transcript592.chrX.nic@DMD	transcript592.chrX.nic	protein_coding	33211282,33020139,32849728,32844783,32823295,32816468,32809493,32699112,32697870,32644964,32644132,32614303,32595757,32573745,32573530,32565853	33211552,33020200,32849820,32844860,32823387,32816640,32809611,32699293,32697998,32645152,32644313,32614453,32595876,32573846,32573637,32565881	Gene ID= ENSG00000198947.15 TPM= 4.25 Transcript Type= NA
chrX	32614386	33211551	32614386	33211551	-	transcript594.chrX.nnic@DMD	transcript594.chrX.nnic	protein_coding	33211282,33078186,33020139,32849728,32844783,32823295,32816468,32809493,32699112,32697870,32644964,32644132,32614386	33211551,33078347,33020200,32849820,32844860,32823387,32816640,32809611,32699293,32697998,32645152,32644313,32614453	Gene ID= ENSG00000198947.15 TPM= 2.66 Transcript Type= NA
chrX	32307513	32312962	32307513	32312962	+	transcript606.chrX.nnic@NA	transcript606.chrX.nnic	NA	32307513	32312962	Gene ID= novel_gene_chrX_607 TPM= 6.37 Transcript Type= NA
chrX	32391792	32394931	32391792	32394931	+	transcript602.chrX.nnic@NA	transcript602.chrX.nnic	NA	32391792	32394931	Gene ID= novel_gene_chrX_603 TPM= 6.37 Transcript Type= NA
chrX	32580013	32583245	32580013	32583245	-	transcript628.chrX.nnic@NA	transcript628.chrX.nnic	NA	32580013	32583245	Gene ID= novel_gene_chrX_629 TPM= 2.12 Transcript Type= NA
chrX	32602453	32604820	32602453	32604820	+	transcript608.chrX.nnic@NA	transcript608.chrX.nnic	NA	32602453	32604820	Gene ID= novel_gene_chrX_609 TPM= 2.12 Transcript Type= NA
chrX	32777278	32778259	32777278	32778259	+	transcript610.chrX.nnic@NA	transcript610.chrX.nnic	NA	32777278	32778259	Gene ID= novel_gene_chrX_611 TPM= 5.31 Transcript Type= NA
chrX	32787955	32788978	32787955	32788978	+	transcript612.chrX.nnic@NA	transcript612.chrX.nnic	NA	32787955	32788978	Gene ID= novel_gene_chrX_613 TPM= 2.12 Transcript Type= NA
chrX	32789863	32793391	32789863	32793391	+	transcript614.chrX.nnic@NA	transcript614.chrX.nnic	NA	32789863	32793391	Gene ID= novel_gene_chrX_615 TPM= 2.12 Transcript Type= NA
chrX	32803366	32806593	32803366	32806593	-	transcript632.chrX.nnic@NA	transcript632.chrX.nnic	NA	32803366	32806593	Gene ID= novel_gene_chrX_633 TPM= 3.19 Transcript Type= NA
chrX	32946751	32952205	32946751	32952205	+	transcript618.chrX.nnic@NA	transcript618.chrX.nnic	NA	32946751	32952205	Gene ID= novel_gene_chrX_619 TPM= 2.12 Transcript Type= NA
chrX	32962913	32965507	32962913	32965507	+	transcript616.chrX.nnic@NA	transcript616.chrX.nnic	NA	32962913	32965507	Gene ID= novel_gene_chrX_617 TPM= 4.25 Transcript Type= NA
chrX	33121051	33121302	33121051	33121302	+	transcript620.chrX.nnic@NA	transcript620.chrX.nnic	NA	33121051	33121302	Gene ID= novel_gene_chrX_621 TPM= 2.12 Transcript Type= NA
chrX	33121426	33123475	33121426	33123475	+	transcript622.chrX.nnic@NA	transcript622.chrX.nnic	NA	33121426	33123475	Gene ID= novel_gene_chrX_623 TPM= 3.19 Transcript Type= NA
chrX	33164930	33166940	33164930	33166940	-	transcript630.chrX.nnic@NA	transcript630.chrX.nnic	NA	33164930	33166940	Gene ID= novel_gene_chrX_631 TPM= 2.12 Transcript Type= NA
chrX	33172074	33174052	33172074	33174052	+	transcript624.chrX.nnic@NA	transcript624.chrX.nnic	NA	33172074	33174052	Gene ID= novel_gene_chrX_625 TPM= 3.19 Transcript Type= NA
chrX	33180999	33182305	33180999	33182305	-	transcript634.chrX.nnic@NA	transcript634.chrX.nnic	NA	33180999	33182305	Gene ID= novel_gene_chrX_635 TPM= 2.12 Transcript Type= NA
chrX	33195944	33198962	33195944	33198962	+	transcript604.chrX.nnic@NA	transcript604.chrX.nnic	NA	33195944	33198962	Gene ID= novel_gene_chrX_605 TPM= 4.25 Transcript Type= NA
chrX	33206889	33211551	33206889	33211551	-	transcript626.chrX.nnic@NA	transcript626.chrX.nnic	NA	33206889	33211551	Gene ID= novel_gene_chrX_627 TPM= 12.75 Transcript Type= NA
chrX	34627064	34657315	34627064	34657315	-	transcript641.chrX.nnic@TMEM47	transcript641.chrX.nnic	protein_coding	34657000,34639247,34627064	34657315,34639387,34630491	Gene ID= ENSG00000147027.3 TPM= 3.19 Transcript Type= NA
chrX	34627064	34657288	34627064	34657288	-	ENST00000275954.3@TMEM47	ENST00000275954.3	protein_coding	34656804,34639247,34627064	34657288,34639387,34630491	Gene ID= ENSG00000147027.3 TPM= 52.05 Transcript Type= protein_coding
chrX	37685759	37732130	37685759	37732130	+	ENST00000378616.3@XK	ENST00000378616.3	protein_coding	37685759,37694286,37727636	37686206,37694548,37732130	Gene ID= ENSG00000047597.5 TPM= 10.62 Transcript Type= protein_coding
chrX	37780011	37813461	37780011	37813461	+	ENST00000378588.4@CYBB	ENST00000378588.4	protein_coding	37780011,37782088,37783490,37791975,37793665,37795951,37798955,37801256,37803877,37805006,37806387,37809567,37810791	37780122,37782183,37783600,37792059,37793810,37796141,37799084,37801348,37804130,37805168,37806533,37809691,37813461	Gene ID= ENSG00000165168.7 TPM= 2.12 Transcript Type= protein_coding
chrX	37838836	37847637	37838836	37847637	-	ENST00000378578.8@DYNLT3	ENST00000378578.8	protein_coding	37847481,37846317,37841782,37841028,37838836	37847637,37846358,37841905,37841105,37840651	Gene ID= ENSG00000165169.10 TPM= 82.85 Transcript Type= protein_coding
chrX	38149339	38220928	38149339	38220928	-	transcript657.chrX.nnic@SRPX	transcript657.chrX.nnic	protein_coding	38220696,38178285,38174160,38171881,38164769,38160933,38160017,38156896,38155641,38154462,38149339	38220928,38178344,38174351,38172057,38164895,38161054,38160196,38157029,38155712,38154583,38149894	Gene ID= ENSG00000101955.14 TPM= 6.14 Transcript Type= NA
chrX	38149336	38220924	38149336	38220924	-	ENST00000544439.5@SRPX	ENST00000544439.5	protein_coding	38220696,38174160,38171881,38164769,38160933,38160017,38156896,38154462,38149336	38220924,38174351,38172057,38164895,38161054,38160196,38157029,38154583,38149894	Gene ID= ENSG00000101955.14 TPM= 14.2 Transcript Type= protein_coding
chrX	38149339	38220899	38149339	38220899	-	ENST00000378533.3@SRPX	ENST00000378533.3	protein_coding	38220696,38178285,38174160,38171881,38164769,38160933,38160017,38156896,38154462,38149339	38220899,38178344,38174351,38172057,38164895,38161054,38160196,38157029,38154583,38149894	Gene ID= ENSG00000101955.14 TPM= 144.05 Transcript Type= protein_coding
chrX	38149336	38220924	38149336	38220924	-	ENST00000538295.5@SRPX	ENST00000538295.5	protein_coding	38220696,38178285,38174160,38171881,38164769,38160933,38160017,38156896,38149336	38220924,38178344,38174351,38172057,38164895,38161054,38160196,38157029,38149894	Gene ID= ENSG00000101955.14 TPM= 5.79 Transcript Type= protein_coding
chrX	38269163	38327564	38269163	38327564	-	ENST00000318842.11@RPGR	ENST00000318842.11	protein_coding	38327340,38323399,38322853,38321027,38318829,38317316,38310615,38304635,38301247,38298956,38297284,38291393,38290959,38287861,38287094,38276587,38275089,38273386,38269163	38327564,38323524,38322945,38321089,38318987,38317465,38310773,38304790,38301371,38299141,38297452,38291484,38291024,38288041,38287245,38276772,38275146,38273477,38269832	Gene ID= ENSG00000156313.12 TPM= 2.12 Transcript Type= protein_coding
chrX	40051248	40073230	40051248	40073230	-	transcript676.chrX.nic@BCOR	transcript676.chrX.nic	protein_coding	40072349,40071637,40070973,40064336,40063608,40062746,40062139,40057155,40055368,40054256,40053886,40051248	40073230,40071690,40071159,40064599,40063850,40063071,40062393,40057321,40055513,40054333,40054042,40052400	Gene ID= ENSG00000183337.16 TPM= 5.13 Transcript Type= NA
chrX	40051248	40097403	40051248	40097403	-	ENST00000378444.8@BCOR	ENST00000378444.8	protein_coding	40097215,40077844,40076454,40072349,40071637,40070973,40064336,40063608,40062746,40062139,40057155,40055368,40054256,40053886,40051248	40097403,40077969,40076532,40075180,40071690,40071159,40064599,40063952,40063071,40062393,40057321,40055513,40054333,40054042,40052400	Gene ID= ENSG00000183337.16 TPM= 4.07 Transcript Type= protein_coding
chrX	40051246	40177329	40051246	40177329	-	ENST00000378455.8@BCOR	ENST00000378455.8	protein_coding	40177007,40077844,40076454,40072349,40070973,40064336,40063608,40062746,40062139,40057155,40055368,40054256,40053886,40051246	40177329,40077969,40076532,40075180,40071159,40064599,40063850,40063071,40062393,40057321,40055513,40054333,40054042,40052400	Gene ID= ENSG00000183337.16 TPM= 10.97 Transcript Type= protein_coding
chrX	40580875	40606848	40580875	40606848	+	ENST00000636580.1@ATP6AP2	ENST00000636580.1	protein_coding	40580875,40588986,40591234,40597249,40597527,40598681,40599592,40600762,40605561	40581102,40589116,40591365,40597344,40597664,40598734,40599741,40600881,40606848	Gene ID= ENSG00000182220.14 TPM= 9.56 Transcript Type= protein_coding
chrX	40580958	40606619	40580958	40606619	+	ENST00000378438.9@ATP6AP2	ENST00000378438.9	protein_coding	40580958,40588986,40591234,40597249,40597527,40598681,40599592,40600762,40605564	40581102,40589116,40591365,40597344,40597664,40598734,40599741,40600881,40606619	Gene ID= ENSG00000182220.14 TPM= 10.62 Transcript Type= protein_coding
chrX	40580900	40592502	40580900	40592502	+	ENST00000487051.2@ATP6AP2	ENST00000487051.2	protein_coding	40580900,40588986,40591234	40581102,40589116,40592502	Gene ID= ENSG00000182220.14 TPM= 1.06 Transcript Type= retained_intron
chrX	40580910	40606606	40580910	40606606	+	ENST00000637327.1@ATP6AP2	ENST00000637327.1	protein_coding	40580910,40591234,40597249,40597527,40598681,40599592,40600762,40605561	40581102,40591365,40597344,40597664,40598734,40599741,40600881,40606606	Gene ID= ENSG00000182220.14 TPM= 1.06 Transcript Type= protein_coding
chrX	40629033	40647547	40629033	40647547	-	ENST00000327877.9@CXorf38	ENST00000327877.9	protein_coding	40647305,40647007,40639009,40637007,40636533,40630614,40629033	40647547,40647141,40639128,40637156,40636712,40630773,40630162	Gene ID= ENSG00000185753.12 TPM= 3.19 Transcript Type= protein_coding
chrX	40719657	40723692	40719657	40723692	+	transcript701.chrX.nnic@NA	transcript701.chrX.nnic	NA	40719657	40723692	Gene ID= novel_gene_chrX_702 TPM= 31.86 Transcript Type= NA
chrX	40735400	40738701	40735400	40738701	+	ENST00000456333.2@MED14OS	ENST00000456333.2	protein_coding	40735400,40738193	40735790,40738701	Gene ID= ENSG00000234636.2 TPM= 2.12 Transcript Type= protein_coding
chrX	41085432	41088225	41085432	41088225	-	transcript708.chrX.nnic@NA	transcript708.chrX.nnic	NA	41085432	41088225	Gene ID= novel_gene_chrX_709 TPM= 91.35 Transcript Type= NA
chrX	41333398	41350274	41333398	41350274	+	ENST00000399959.6@DDX3X	ENST00000399959.6	protein_coding	41333398,41337408,41339036,41341484,41342495,41342737,41343216,41343737,41344030,41344239,41345180,41345404,41346229,41346505,41346859,41347312,41347640	41334297,41337465,41339083,41341616,41342653,41342836,41343351,41343822,41344128,41344399,41345324,41345548,41346410,41346622,41347012,41347451,41350274	Gene ID= ENSG00000215301.9 TPM= 31.86 Transcript Type= protein_coding
chrX	41688973	41697277	41688973	41697277	+	ENST00000378142.8@GPR34	ENST00000378142.8	protein_coding	41688973,41689743,41695555	41689084,41689835,41697277	Gene ID= ENSG00000171659.13 TPM= 1.06 Transcript Type= protein_coding
chrX	43654907	43746824	43654907	43746824	+	ENST00000542639.5@MAOA	ENST00000542639.5	protein_coding	43654907,43657862,43683513,43693291,43711872,43712705,43728173,43731241,43731694,43732699,43736227,43740681,43741950,43743794,43744109,43744367	43656414,43657969,43683607,43693428,43711976,43712796,43728314,43731390,43731853,43732795,43736280,43740738,43742047,43743905,43744171,43746824	Gene ID= ENSG00000189221.9 TPM= 7.97 Transcript Type= protein_coding
chrX	43656219	43746821	43656219	43746821	+	ENST00000338702.3@MAOA	ENST00000338702.3	protein_coding	43656219,43683513,43693291,43711872,43712705,43728173,43731241,43731694,43732699,43736227,43740681,43741950,43743794,43744109,43744367	43656414,43683607,43693428,43711976,43712796,43728314,43731390,43731853,43732795,43736280,43740738,43742047,43743905,43744171,43746821	Gene ID= ENSG00000189221.9 TPM= 71.7 Transcript Type= protein_coding
chrX	43766611	43882441	43766611	43882441	-	transcript733.chrX.nnic@MAOB	transcript733.chrX.nnic	protein_coding	43882254,43843670,43803300,43802172,43797125,43795739,43793419,43781448,43780342,43778682,43775175,43769307,43768654,43766611	43882441,43843764,43803404,43802263,43797266,43795888,43793578,43781544,43780395,43778739,43775272,43769418,43768716,43767618	Gene ID= ENSG00000069535.13 TPM= 25.49 Transcript Type= NA
chrX	43855661	43882437	43855661	43882437	-	transcript747.chrX.nnic@MAOB	transcript747.chrX.nnic	protein_coding	43882254,43855661	43882437,43856006	Gene ID= ENSG00000069535.13 TPM= 14.87 Transcript Type= NA
chrX	43766611	43882447	43766611	43882447	-	ENST00000378069.4@MAOB	ENST00000378069.4	protein_coding	43882254,43843670,43838868,43803300,43802172,43797125,43795739,43793419,43781448,43780342,43778682,43775175,43769307,43768654,43766611	43882447,43843764,43839005,43803404,43802263,43797266,43795888,43793578,43781544,43780395,43778739,43775272,43769418,43768716,43767618	Gene ID= ENSG00000069535.13 TPM= 311.21 Transcript Type= protein_coding
chrX	44523639	44543001	44523639	44543001	-	ENST00000378045.4@FUNDC1	ENST00000378045.4	protein_coding	44542805,44541945,44538467,44527237,44523639	44543001,44542101,44538542,44527365,44524275	Gene ID= ENSG00000069509.5 TPM= 7.44 Transcript Type= protein_coding
chrX	44873177	45112598	44873177	45112598	+	ENST00000382899.8@KDM6A	ENST00000382899.8	protein_coding	44873177,44873924,44961284,44974666,45010961,45020610,45034931,45037655,45051709,45053829,45059006,45059247,45060609,45061324,45062647,45063422,45069579,45076697,45078400,45079146,45082576,45082715,45083460,45085865,45089743,45090723,45107410,45110079,45111382	44873712,44873987,44961392,44974715,45011019,45020730,45034985,45037689,45051802,45053955,45059104,45059466,45060764,45061419,45062748,45063817,45070357,45076826,45078505,45079351,45082640,45082789,45083608,45085979,45089930,45090864,45107536,45110249,45112598	Gene ID= ENSG00000147050.14 TPM= 2.12 Transcript Type= protein_coding
chrX	44913300	44914343	44913300	44914343	-	transcript768.chrX.nnic@NA	transcript768.chrX.nnic	NA	44913300	44914343	Gene ID= novel_gene_chrX_769 TPM= 3.19 Transcript Type= NA
chrX	44922030	44923362	44922030	44923362	-	transcript766.chrX.nnic@NA	transcript766.chrX.nnic	NA	44922030	44923362	Gene ID= novel_gene_chrX_767 TPM= 16.99 Transcript Type= NA
chrX	45017541	45019089	45017541	45019089	-	transcript770.chrX.nnic@NA	transcript770.chrX.nnic	NA	45017541	45019089	Gene ID= novel_gene_chrX_771 TPM= 2.12 Transcript Type= NA
chrX	45048111	45049763	45048111	45049763	-	transcript772.chrX.nnic@NA	transcript772.chrX.nnic	NA	45048111	45049763	Gene ID= novel_gene_chrX_773 TPM= 3.19 Transcript Type= NA
chrX	45148374	45200901	45148374	45200901	-	ENST00000398000.6@CXorf36	ENST00000398000.6	protein_coding	45200594,45191751,45157715,45153910,45148374	45200901,45192015,45157888,45154198,45151992	Gene ID= ENSG00000147113.16 TPM= 10.09 Transcript Type= protein_coding
chrX	45162310	45200901	45162310	45200901	-	ENST00000377934.4@CXorf36	ENST00000377934.4	protein_coding	45200594,45191751,45162310	45200901,45192015,45164249	Gene ID= ENSG00000147113.16 TPM= 3.72 Transcript Type= protein_coding
chrX	45173550	45174839	45173550	45174839	-	transcript779.chrX.nnic@NA	transcript779.chrX.nnic	NA	45173550	45174839	Gene ID= novel_gene_chrX_780 TPM= 2.12 Transcript Type= NA
chrX	46326263	46327651	46326263	46327651	-	transcript783.chrX.nnic@LINC01186	transcript783.chrX.nnic	lincRNA	46327551,46327304,46326263	46327651,46327402,46326454	Gene ID= ENSG00000236751.1 TPM= 2.12 Transcript Type= NA
chrX	46446857	46474639	46446857	46474639	+	ENST00000344302.8@KRBOX4	ENST00000344302.8	protein_coding	46446857,46448200,46450431,46462748,46463198,46472750	46447346,46448310,46450475,46462874,46463308,46474639	Gene ID= ENSG00000147121.15 TPM= 3.19 Transcript Type= protein_coding
chrX	46573784	46598408	46573784	46598408	+	ENST00000276055.3@CHST7	ENST00000276055.3	protein_coding	46573784,46597760	46575423,46598408	Gene ID= ENSG00000147119.3 TPM= 6.37 Transcript Type= protein_coding
chrX	46836940	46882358	46836940	46882358	+	ENST00000218340.3@RP2	ENST00000218340.3	protein_coding	46836940,46853476,46859988,46877505,46879686	46837202,46854141,46860102,46877590,46882358	Gene ID= ENSG00000102218.5 TPM= 10.62 Transcript Type= protein_coding
chrX	47078380	47093313	47078380	47093313	+	ENST00000352078.8@RGN	ENST00000352078.8	protein_coding	47078380,47081130,47084418,47089776,47091678,47092061,47092897	47078709,47081307,47084600,47089991,47091809,47092215,47093313	Gene ID= ENSG00000130988.12 TPM= 10.09 Transcript Type= protein_coding
chrX	47078381	47093310	47078381	47093310	+	transcript812.chrX.nic@RGN	transcript812.chrX.nic	protein_coding	47078381,47081130,47084418,47091678,47092061,47092897	47078709,47081307,47084600,47091809,47092215,47093310	Gene ID= ENSG00000130988.12 TPM= 4.78 Transcript Type= NA
chrX	47078355	47093314	47078355	47093314	+	ENST00000397180.5@RGN	ENST00000397180.5	protein_coding	47078355,47080317,47081130,47084418,47089776,47091678,47092061,47092897	47078709,47080936,47081307,47084600,47089991,47091809,47092215,47093314	Gene ID= ENSG00000130988.12 TPM= 2.12 Transcript Type= protein_coding
chrX	47142216	47145504	47142216	47145504	-	ENST00000377811.3@NDUFB11	ENST00000377811.3	protein_coding	47144473,47142614,47142216	47145504,47142744,47142440	Gene ID= ENSG00000147123.10 TPM= 90.28 Transcript Type= protein_coding
chrX	47142220	47145038	47142220	47145038	-	ENST00000276062.8@NDUFB11	ENST00000276062.8	protein_coding	47144473,47142584,47142220	47145038,47142744,47142440	Gene ID= ENSG00000147123.10 TPM= 37.18 Transcript Type= protein_coding
chrX	47144869	47186811	47144869	47186811	+	ENST00000377604.7@RBM10	ENST00000377604.7	protein_coding	47144869,47147357,47169315,47171028,47173128,47175019,47176500,47179103,47179319,47179880,47180212,47180419,47181215,47181507,47181749,47181951,47182162,47185055,47185302,47185442,47185716,47186065,47186258,47186474	47145485,47147498,47169498,47171258,47173197,47175092,47176586,47179163,47179495,47180040,47180309,47180506,47181401,47181646,47181866,47182042,47182326,47185204,47185367,47185630,47185790,47186171,47186387,47186811	Gene ID= ENSG00000182872.15 TPM= 39.3 Transcript Type= protein_coding
chrX	47193798	47215128	47193798	47215128	+	transcript827.chrX.nnic@UBA1	transcript827.chrX.nnic	protein_coding	47193798,47196356,47196947,47198803,47199048,47199209,47199480,47200894,47201276,47201478,47202156,47202358,47202638,47202943,47203134,47203541,47205948,47206248,47209623,47209928,47210842,47211036,47212424,47212771,47212990,47214327,47214537,47214794	47194024,47196469,47197024,47198919,47199106,47199377,47199614,47201000,47201366,47201610,47202253,47202504,47202814,47203047,47203214,47203696,47206113,47206444,47209687,47210123,47210916,47211225,47212512,47212863,47213181,47214428,47214637,47215128	Gene ID= ENSG00000130985.16 TPM= 25.73 Transcript Type= NA
chrX	47193797	47215128	47193797	47215128	+	transcript831.chrX.nnic@UBA1	transcript831.chrX.nnic	protein_coding	47193797,47196947,47198803,47199048,47199209,47199480,47200894,47201276,47201478,47202156,47202358,47202638,47202943,47203134,47203541,47205948,47206248,47209623,47209928,47210842,47211036,47212424,47212771,47212990,47214327,47214537,47214794	47194024,47197024,47198919,47199106,47199377,47199614,47201000,47201366,47201610,47202253,47202504,47202814,47203047,47203214,47203696,47206113,47206444,47209687,47210123,47210916,47211225,47212512,47212863,47213181,47214428,47214637,47215128	Gene ID= ENSG00000130985.16 TPM= 41.02 Transcript Type= NA
chrX	47196593	47215128	47196593	47215128	+	transcript840.chrX.nic@UBA1	transcript840.chrX.nic	protein_coding	47196593,47199048,47199209,47199480,47200894,47201276,47201478,47202156,47202358,47202638,47202943,47203134,47203541,47205948,47206248,47209623,47209928,47210842,47211036,47212424,47212771,47212990,47214327,47214537,47214794	47198919,47199106,47199377,47199614,47201000,47201366,47201610,47202253,47202504,47202814,47203047,47203214,47203696,47206113,47206444,47209687,47210123,47210916,47211225,47212512,47212863,47213181,47214428,47214637,47215128	Gene ID= ENSG00000130985.16 TPM= 24.81 Transcript Type= NA
chrX	47208562	47215126	47208562	47215126	+	ENST00000377269.3@UBA1	ENST00000377269.3	protein_coding	47208562,47209928,47210842,47211036,47212424,47212771,47212990,47214327,47214537,47214794	47209687,47210123,47210916,47211225,47212512,47212863,47213181,47214428,47214637,47215126	Gene ID= ENSG00000130985.16 TPM= 7.88 Transcript Type= protein_coding
chrX	47204140	47206972	47204140	47206972	+	transcript844.chrX.nic@UBA1	transcript844.chrX.nic	protein_coding	47204140,47206248	47206113,47206972	Gene ID= ENSG00000130985.16 TPM= 11.68 Transcript Type= NA
chrX	47190861	47215128	47190861	47215128	+	ENST00000377351.8@UBA1	ENST00000377351.8	protein_coding	47190861,47198803,47199048,47199209,47199480,47200894,47201276,47201478,47202156,47202358,47202638,47202943,47203134,47203541,47205948,47206248,47209623,47209928,47210842,47211036,47212424,47212771,47212990,47214327,47214537,47214794	47190950,47198919,47199106,47199377,47199614,47201000,47201366,47201610,47202253,47202504,47202814,47203047,47203214,47203696,47206113,47206444,47209687,47210123,47210916,47211225,47212512,47212863,47213181,47214428,47214637,47215128	Gene ID= ENSG00000130985.16 TPM= 26.68 Transcript Type= protein_coding
chrX	47193842	47215128	47193842	47215128	+	ENST00000335972.10@UBA1	ENST00000335972.10	protein_coding	47193842,47198803,47199048,47199209,47199480,47200894,47201276,47201478,47202156,47202358,47202638,47202943,47203134,47203541,47205948,47206248,47209623,47209928,47210842,47211036,47212424,47212771,47212990,47214327,47214537,47214794	47194024,47198919,47199106,47199377,47199614,47201000,47201366,47201610,47202253,47202504,47202814,47203047,47203214,47203696,47206113,47206444,47209687,47210123,47210916,47211225,47212512,47212863,47213181,47214428,47214637,47215128	Gene ID= ENSG00000130985.16 TPM= 87.22 Transcript Type= protein_coding
chrX	47218696	47229997	47218696	47229997	+	transcript859.chrX.nic@CDK16	transcript859.chrX.nic	protein_coding	47218696,47223552,47224385,47224618,47224834,47224988,47225772,47225965,47226279,47226583,47226812,47226994,47227181,47227379,47228567,47229020	47219105,47223759,47224518,47224743,47224890,47225102,47225866,47226027,47226402,47226703,47226909,47227099,47227223,47227469,47228644,47229997	Gene ID= ENSG00000102225.15 TPM= 24.08 Transcript Type= NA
chrX	47218688	47229997	47218688	47229997	+	ENST00000357227.8@CDK16	ENST00000357227.8	protein_coding	47218688,47223552,47224385,47224618,47224834,47224988,47225772,47225965,47226279,47226583,47226812,47226994,47227181,47227379,47228567,47228731	47219105,47223759,47224518,47224743,47224890,47225102,47225866,47226027,47226402,47226703,47226909,47227099,47227223,47227469,47228644,47229997	Gene ID= ENSG00000102225.15 TPM= 37.89 Transcript Type= protein_coding
chrX	47232690	47248328	47232690	47248328	+	ENST00000377107.6@USP11	ENST00000377107.6	protein_coding	47232690,47239070,47239351,47239790,47240305,47240587,47240774,47241277,47241541,47242082,47242439,47242626,47243396,47244498,47244682,47245016,47245370,47247072,47247304,47247611,47247793	47233219,47239179,47239481,47239907,47240450,47240648,47240876,47241450,47241699,47242306,47242522,47242720,47243602,47244550,47244924,47245086,47245482,47247221,47247419,47247699,47248328	Gene ID= ENSG00000102226.9 TPM= 26.82 Transcript Type= protein_coding
chrX	47233422	47247952	47233422	47247952	+	transcript872.chrX.nic@USP11	transcript872.chrX.nic	protein_coding	47233422,47239070,47239351,47239790,47240305,47240587,47240774,47241277,47241541,47242082,47242439,47242626,47243396,47244498,47244682,47245016,47245370,47247072,47247304,47247611,47247793	47233533,47239179,47239481,47239907,47240450,47240648,47240876,47241450,47241699,47242306,47242522,47242720,47243602,47244550,47244924,47245086,47245482,47247221,47247419,47247699,47247952	Gene ID= ENSG00000102226.9 TPM= 8.76 Transcript Type= NA
chrX	47233814	47248328	47233814	47248328	+	transcript875.chrX.nic@USP11	transcript875.chrX.nic	protein_coding	47233814,47239070,47239351,47239790,47240305,47240587,47240774,47241277,47241541,47242082,47242439,47242626,47243396,47244498,47244682,47245016,47245370,47247072,47247304,47247611,47247793	47233912,47239179,47239481,47239907,47240450,47240648,47240876,47241450,47241699,47242306,47242522,47242720,47243602,47244550,47244924,47245086,47245482,47247221,47247419,47247699,47248328	Gene ID= ENSG00000102226.9 TPM= 16.2 Transcript Type= NA
chrX	47461101	47463226	47461101	47463226	-	transcript892.chrX.nnic@NA	transcript892.chrX.nnic	NA	47461101	47463226	Gene ID= novel_gene_chrX_893 TPM= 2.12 Transcript Type= NA
chrX	47482666	47485270	47482666	47485270	+	transcript890.chrX.nnic@NA	transcript890.chrX.nnic	NA	47482666	47485270	Gene ID= novel_gene_chrX_891 TPM= 5.31 Transcript Type= NA
chrX	47561186	47571900	47561186	47571900	+	transcript894.chrX.nnic@ARAF	transcript894.chrX.nnic	protein_coding	47561186,47562682,47562909,47563226,47564797,47564985,47565252,47566639,47566884,47566986,47567230,47568718,47568987,47569539,47569893,47570878,47571323	47561251,47562762,47563063,47563329,47564899,47565139,47565350,47566780,47566911,47567131,47567432,47568894,47569033,47569657,47570024,47571012,47571900	Gene ID= ENSG00000078061.12 TPM= 55.23 Transcript Type= NA
chrX	47561194	47565970	47561194	47565970	+	transcript907.chrX.nic@ARAF	transcript907.chrX.nic	protein_coding	47561194,47562909,47563226,47564797,47564985	47561251,47563063,47563329,47564899,47565970	Gene ID= ENSG00000078061.12 TPM= 3.19 Transcript Type= NA
chrX	47561222	47565975	47561222	47565975	+	ENST00000377039.2@ARAF	ENST00000377039.2	protein_coding	47561222,47562909,47563226,47564797,47564985,47565252	47561251,47563063,47563329,47564899,47565139,47565975	Gene ID= ENSG00000078061.12 TPM= 10.62 Transcript Type= protein_coding
chrX	47571898	47574817	47571898	47574817	-	transcript910.chrX.nic@SYN1	transcript910.chrX.nic	protein_coding	47574688,47574002,47571898	47574817,47574590,47572999	Gene ID= ENSG00000008056.13 TPM= 7.97 Transcript Type= NA
chrX	47571901	47574817	47571901	47574817	-	transcript911.chrX.nic@SYN1	transcript911.chrX.nic	protein_coding	47574688,47574002,47571901	47574817,47574590,47572961	Gene ID= ENSG00000008056.13 TPM= 14.34 Transcript Type= NA
chrX	47582313	47586789	47582313	47586789	+	ENST00000218388.8@TIMP1	ENST00000218388.8	protein_coding	47582313,47583408,47584936,47585205,47585543,47586521	47582474,47583536,47585015,47585331,47585667,47586789	Gene ID= ENSG00000102265.11 TPM= 142.33 Transcript Type= protein_coding
chrX	47582450	47586789	47582450	47586789	+	ENST00000377017.5@TIMP1	ENST00000377017.5	protein_coding	47582450,47584936,47585205,47585543,47586521	47582474,47585015,47585331,47585667,47586789	Gene ID= ENSG00000102265.11 TPM= 5.31 Transcript Type= protein_coding
chrX	47585713	47586788	47585713	47586788	+	transcript912.chrX.nnic@NA	transcript912.chrX.nnic	NA	47585713	47586788	Gene ID= novel_gene_chrX_913 TPM= 3.19 Transcript Type= NA
chrX	47651798	47659161	47651798	47659161	-	ENST00000333119.7@UXT	ENST00000333119.7	protein_coding	47659115,47658830,47657782,47657572,47657183,47652081,47651798	47659161,47658936,47657863,47657639,47657290,47652144,47651895	Gene ID= ENSG00000126756.11 TPM= 38.77 Transcript Type= protein_coding
chrX	47651805	47659117	47651805	47659117	-	ENST00000335890.2@UXT	ENST00000335890.2	protein_coding	47658830,47657782,47657572,47657183,47652081,47651805	47659117,47657863,47657639,47657290,47652144,47651895	Gene ID= ENSG00000126756.11 TPM= 6.9 Transcript Type= protein_coding
chrX	48058180	48071658	48058180	48071658	-	ENST00000442455.7@ZNF630	ENST00000442455.7	protein_coding	48071267,48066872,48060819,48060450,48058180	48071658,48067061,48060945,48060545,48060203	Gene ID= ENSG00000221994.10 TPM= 9.56 Transcript Type= protein_coding
chrX	48476161	48486305	48476161	48486305	+	ENST00000348411.2@FTSJ1	ENST00000348411.2	protein_coding	48476161,48477961,48478449,48478617,48479038,48481151,48481289,48481426,48481632,48482403,48482597,48482986,48485736	48476396,48478168,48478518,48478707,48479116,48481203,48481342,48481528,48481715,48482506,48482794,48483027,48486305	Gene ID= ENSG00000068438.14 TPM= 9.03 Transcript Type= protein_coding
chrX	48476176	48486299	48476176	48486299	+	transcript941.chrX.nic@FTSJ1	transcript941.chrX.nic	protein_coding	48476176,48477961,48478449,48478617,48479038,48481151,48481289,48481426,48481632,48482403,48482597,48485736	48476396,48478168,48478518,48478707,48479116,48481203,48481342,48481528,48481715,48482506,48483027,48486299	Gene ID= ENSG00000068438.14 TPM= 5.84 Transcript Type= NA
chrX	48508961	48520806	48508961	48520806	+	transcript948.chrX.nic@PORCN	transcript948.chrX.nic	protein_coding	48508961,48509784,48511295,48511892,48512326,48512589,48512835,48514127,48514240,48514525,48515717,48515890,48516061,48517183,48520375	48509103,48509956,48511487,48511935,48512507,48512719,48512852,48514141,48514365,48514625,48515793,48515953,48516146,48517293,48520806	Gene ID= ENSG00000102312.21 TPM= 18.59 Transcript Type= NA
chrX	48509002	48520814	48509002	48520814	+	ENST00000355961.8@PORCN	ENST00000355961.8	protein_coding	48509002,48509784,48511295,48511892,48512326,48512589,48512835,48514240,48514525,48515717,48515890,48516061,48517183,48520375	48509103,48509956,48511487,48511935,48512507,48512719,48512852,48514365,48514625,48515793,48515953,48516146,48517293,48520814	Gene ID= ENSG00000102312.21 TPM= 10.09 Transcript Type= protein_coding
chrX	48521158	48528716	48521158	48528716	+	ENST00000495186.5@EBP	ENST00000495186.5	protein_coding	48521158,48523699,48526989,48527155,48528234	48521907,48524072,48527025,48527285,48528716	Gene ID= ENSG00000147155.10 TPM= 21.24 Transcript Type= protein_coding
chrX	48521799	48528710	48521799	48528710	+	ENST00000276096.10@EBP	ENST00000276096.10	protein_coding	48521799,48523923,48526989,48527155,48528234	48521907,48524072,48527025,48527285,48528710	Gene ID= ENSG00000147155.10 TPM= 5.31 Transcript Type= processed_transcript
chrX	48539457	48562609	48539457	48562609	+	ENST00000376771.8@TBC1D25	ENST00000376771.8	protein_coding	48539457,48541333,48544869,48558897,48559158,48559614	48539920,48541442,48545023,48559024,48559346,48562609	Gene ID= ENSG00000068354.15 TPM= 14.87 Transcript Type= protein_coding
chrX	48539716	48561214	48539716	48561214	+	transcript985.chrX.nnic@TBC1D25	transcript985.chrX.nnic	protein_coding	48539716,48541333,48544869,48558897,48559158,48559614	48539920,48541513,48545023,48559024,48559346,48561214	Gene ID= ENSG00000068354.15 TPM= 11.68 Transcript Type= NA
chrX	48566483	48566855	48566483	48566855	+	transcript1001.chrX.nnic@NA	transcript1001.chrX.nnic	NA	48566483	48566855	Gene ID= novel_gene_chrX_1002 TPM= 2.12 Transcript Type= NA
chrX	48574509	48578281	48574509	48578281	+	transcript988.chrX.nic@RBM3	transcript988.chrX.nic	protein_coding	48574509,48575168,48575561,48576508,48577026,48577465	48574573,48575283,48576419,48576604,48577109,48578281	Gene ID= ENSG00000102317.17 TPM= 5.31 Transcript Type= NA
chrX	48597478	48608867	48597478	48608867	+	ENST00000376729.9@WDR13	ENST00000376729.9	protein_coding	48597478,48597958,48598717,48599353,48599587,48600319,48601784,48602065,48604272,48604848	48597614,48598037,48598957,48599462,48599717,48600626,48601964,48602206,48604390,48608867	Gene ID= ENSG00000101940.17 TPM= 79.84 Transcript Type= protein_coding
chrX	48597474	48605193	48597474	48605193	+	transcript959.chrX.nic@WDR13	transcript959.chrX.nic	protein_coding	48597474,48597958,48598751,48599353,48599587,48600319,48601784,48602065,48604272,48604848	48597614,48598037,48598957,48599462,48599717,48600626,48601964,48602206,48604390,48605193	Gene ID= ENSG00000101940.17 TPM= 19.3 Transcript Type= NA
chrX	48597492	48605193	48597492	48605193	+	ENST00000218056.9@WDR13	ENST00000218056.9	protein_coding	48597492,48598717,48599353,48599587,48600319,48601784,48602065,48604272,48604848	48598037,48598957,48599462,48599717,48600626,48601964,48602206,48604390,48605193	Gene ID= ENSG00000101940.17 TPM= 74.53 Transcript Type= protein_coding
chrX	48696595	48709012	48696595	48709012	+	ENST00000376687.3@SUV39H1	ENST00000376687.3	protein_coding	48696595,48698902,48700091,48706265,48706498,48707437	48696803,48699047,48700753,48706411,48706627,48709012	Gene ID= ENSG00000101945.16 TPM= 5.31 Transcript Type= protein_coding
chrX	48801995	48824976	48801995	48824976	+	ENST00000334136.9@HDAC6	ENST00000334136.9	protein_coding	48801995,48802663,48802871,48803128,48805438,48805631,48806368,48806609,48808033,48808258,48814440,48814675,48814834,48814962,48815384,48815575,48815884,48816141,48816465,48817326,48818041,48818220,48820106,48822620,48822912,48823672,48823922,48824166,48824544	48802142,48802785,48802999,48803216,48805522,48805671,48806464,48806706,48808137,48808326,48814566,48814740,48814893,48815051,48815490,48815642,48816052,48816269,48816633,48817459,48818109,48818412,48820255,48822794,48823588,48823785,48824068,48824294,48824976	Gene ID= ENSG00000094631.18 TPM= 9.21 Transcript Type= protein_coding
chrX	48802212	48824976	48802212	48824976	+	transcript1007.chrX.nic@HDAC6	transcript1007.chrX.nic	protein_coding	48802212,48802663,48802871,48803128,48805438,48805631,48806368,48806609,48808033,48808258,48814440,48814675,48814834,48814962,48815384,48815575,48815884,48816141,48816465,48817326,48818041,48818220,48820106,48822620,48822912,48823672,48823922,48824166,48824544	48802272,48802785,48802999,48803216,48805522,48805671,48806464,48806706,48808137,48808326,48814566,48814740,48814893,48815051,48815490,48815642,48816052,48816269,48816633,48817459,48818109,48818412,48820255,48822794,48823588,48823785,48824068,48824294,48824976	Gene ID= ENSG00000094631.18 TPM= 7.08 Transcript Type= NA
chrX	48802438	48824976	48802438	48824976	+	transcript1008.chrX.nic@HDAC6	transcript1008.chrX.nic	protein_coding	48802438,48802663,48802871,48803128,48805438,48805631,48806368,48806609,48808033,48808258,48814440,48814675,48814834,48814962,48815384,48815575,48815884,48816141,48816465,48817326,48818041,48818220,48820106,48822620,48822912,48823672,48823922,48824166,48824544	48802551,48802785,48802999,48803216,48805522,48805671,48806464,48806706,48808137,48808326,48814566,48814740,48814893,48815051,48815490,48815642,48816052,48816269,48816633,48817459,48818109,48818412,48820255,48822794,48823588,48823785,48824068,48824294,48824976	Gene ID= ENSG00000094631.18 TPM= 7.08 Transcript Type= NA
chrX	48831094	48835633	48831094	48835633	-	ENST00000218230.5@PCSK1N	ENST00000218230.5	protein_coding	48835419,48831869,48831094	48835633,48832341,48831455	Gene ID= ENSG00000102109.8 TPM= 19.12 Transcript Type= protein_coding
chrX	48893449	48898147	48893449	48898147	-	transcript1023.chrX.nic@TIMM17B	transcript1023.chrX.nic	protein_coding	48897724,48896759,48895038,48894097,48893900,48893449	48898147,48896858,48895101,48894225,48894010,48893817	Gene ID= ENSG00000126768.12 TPM= 68.16 Transcript Type= NA
chrX	48893449	48897790	48893449	48897790	-	transcript1024.chrX.nnic@TIMM17B	transcript1024.chrX.nnic	protein_coding	48897724,48895038,48894097,48893900,48893449	48897790,48895101,48894225,48894010,48893817	Gene ID= ENSG00000126768.12 TPM= 10.8 Transcript Type= NA
chrX	48893453	48897790	48893453	48897790	-	ENST00000495490.6@TIMM17B	ENST00000495490.6	protein_coding	48897724,48896759,48895352,48895038,48894097,48893900,48893453	48897790,48896858,48895454,48895101,48894225,48894010,48893817	Gene ID= ENSG00000126768.12 TPM= 8.15 Transcript Type= protein_coding
chrX	48897912	48903142	48897912	48903142	+	ENST00000376563.5@PQBP1	ENST00000376563.5	protein_coding	48897912,48898492,48901190,48901930,48902233,48902732,48902928	48898093,48898576,48901301,48902042,48902517,48902795,48903142	Gene ID= ENSG00000102103.15 TPM= 6.72 Transcript Type= protein_coding
chrX	48897952	48903143	48897952	48903143	+	ENST00000477997.5@PQBP1	ENST00000477997.5	protein_coding	48897952,48898492,48901190,48901930,48902233,48902732,48902928	48898014,48898576,48901301,48902042,48902517,48902795,48903143	Gene ID= ENSG00000102103.15 TPM= 4.07 Transcript Type= processed_transcript
chrX	48898041	48903143	48898041	48903143	+	ENST00000474671.5@PQBP1	ENST00000474671.5	protein_coding	48898041,48898492,48901190,48901930,48902233,48902732,48902928	48898082,48898576,48901301,48902042,48902517,48902795,48903143	Gene ID= ENSG00000102103.15 TPM= 3.01 Transcript Type= processed_transcript
chrX	48903613	48911669	48903613	48911669	-	ENST00000445167.7@SLC35A2	ENST00000445167.7	protein_coding	48911546,48909814,48906392,48903613	48911669,48909996,48906543,48904892	Gene ID= ENSG00000102100.15 TPM= 3.19 Transcript Type= protein_coding
chrX	48903184	48911958	48903184	48911958	-	ENST00000376521.6@SLC35A2	ENST00000376521.6	protein_coding	48911546,48909814,48906392,48903184	48911958,48909996,48906543,48905482	Gene ID= ENSG00000102100.15 TPM= 4.25 Transcript Type= protein_coding
chrX	48903184	48911646	48903184	48911646	-	ENST00000376529.8@SLC35A2	ENST00000376529.8	protein_coding	48911546,48909814,48906392,48904746,48903184	48911646,48909996,48906543,48904892,48903465	Gene ID= ENSG00000102100.15 TPM= 6.37 Transcript Type= protein_coding
chrX	48913182	48919024	48913182	48919024	-	ENST00000376509.4@PIM2	ENST00000376509.4	protein_coding	48918774,48918536,48917781,48915020,48914395,48913182	48919024,48918645,48917831,48915392,48914571,48914294	Gene ID= ENSG00000102096.9 TPM= 4.25 Transcript Type= protein_coding
chrX	48922212	48957599	48922212	48957599	-	ENST00000376488.7@OTUD5	ENST00000376488.7	protein_coding	48956977,48944190,48934954,48934711,48934464,48925847,48923851,48923633,48922212	48957599,48944283,48935018,48934867,48934612,48926050,48924052,48923746,48923295	Gene ID= ENSG00000068308.13 TPM= 19.65 Transcript Type= protein_coding
chrX	48922211	48957631	48922211	48957631	-	ENST00000156084.8@OTUD5	ENST00000156084.8	protein_coding	48956977,48944190,48934954,48934696,48934464,48925847,48923851,48923633,48922211	48957631,48944283,48935018,48934867,48934612,48926050,48924052,48923746,48923295	Gene ID= ENSG00000068308.13 TPM= 7.97 Transcript Type= protein_coding
chrX	48926794	48928842	48926794	48928842	+	transcript1046.chrX.nnic@NA	transcript1046.chrX.nnic	NA	48926794	48928842	Gene ID= novel_gene_chrX_1047 TPM= 10.62 Transcript Type= NA
chrX	48973723	49002264	48973723	49002264	-	transcript1048.chrX.nnic@GRIPAP1	transcript1048.chrX.nnic	protein_coding	49002188,48999438,48999238,48998154,48997250,48993428,48990926,48990685,48989972,48989835,48989611,48988121,48987785,48986165,48985268,48983775,48983228,48982979,48981795,48981596,48981416,48981215,48978305,48976241,48976018,48975155,48973723	49002264,48999504,48999299,48998180,48997357,48993578,48991110,48990732,48990003,48989882,48989710,48988198,48987877,48986239,48985402,48983870,48983440,48983092,48981872,48981691,48981472,48981314,48978435,48976363,48976111,48975309,48974285	Gene ID= ENSG00000068400.13 TPM= 3.54 Transcript Type= NA
chrX	48973723	49002264	48973723	49002264	-	ENST00000376423.8@GRIPAP1	ENST00000376423.8	protein_coding	49002188,48999438,48999238,48998154,48997250,48993428,48990926,48990685,48989972,48989835,48989611,48988121,48987785,48985268,48983775,48983228,48982979,48981795,48981596,48981416,48981215,48978305,48976241,48976018,48975155,48973723	49002264,48999504,48999299,48998180,48997357,48993578,48991110,48990732,48990003,48989882,48989710,48988198,48987877,48985402,48983870,48983440,48983092,48981872,48981691,48981472,48981314,48978435,48976363,48976111,48975309,48974285	Gene ID= ENSG00000068400.13 TPM= 16.28 Transcript Type= protein_coding
chrX	48973723	49002264	48973723	49002264	-	transcript1054.chrX.nic@GRIPAP1	transcript1054.chrX.nic	protein_coding	49002188,48999438,48999238,48998154,48997250,48993428,48990926,48990685,48989972,48989835,48989611,48988121,48987785,48985268,48983775,48983228,48982979,48981795,48981596,48981416,48981215,48978305,48976241,48975155,48973723	49002264,48999504,48999299,48998180,48997357,48993578,48991110,48990732,48990003,48989882,48989710,48988198,48987877,48985402,48983870,48983440,48983092,48981872,48981691,48981472,48981314,48978435,48976363,48976111,48974285	Gene ID= ENSG00000068400.13 TPM= 3.54 Transcript Type= NA
chrX	48977692	49002264	48977692	49002264	-	transcript1063.chrX.nic@GRIPAP1	transcript1063.chrX.nic	protein_coding	49002188,48999438,48999238,48998154,48997250,48993428,48990926,48990685,48989972,48989835,48989611,48988121,48987785,48985268,48983775,48983228,48982979,48981596,48981416,48981215,48977692	49002264,48999504,48999299,48998180,48997357,48993578,48991110,48990732,48990003,48989882,48989710,48988198,48987877,48985402,48983870,48983440,48983092,48981691,48981472,48981314,48978435	Gene ID= ENSG00000068400.13 TPM= 3.19 Transcript Type= NA
chrX	49028731	49043486	49028731	49043486	-	ENST00000315869.7@TFE3	ENST00000315869.7	protein_coding	49043111,49040455,49039107,49038197,49038010,49034134,49033726,49033465,49031397,49028731	49043486,49040568,49039410,49038442,49038114,49034251,49033782,49033540,49031544,49030601	Gene ID= ENSG00000068323.16 TPM= 14.87 Transcript Type= protein_coding
chrX	49028726	49043410	49028726	49043410	-	ENST00000493583.5@TFE3	ENST00000493583.5	protein_coding	49043111,49040455,49039107,49038197,49038010,49034134,49033726,49033465,49031397,49028726	49043410,49040568,49039345,49038442,49038114,49034251,49033782,49033540,49031544,49030601	Gene ID= ENSG00000068323.16 TPM= 12.75 Transcript Type= nonsense_mediated_decay
chrX	49071156	49074071	49071156	49074071	-	ENST00000553851.2@PRAF2	ENST00000553851.2	protein_coding	49073809,49072433,49071156	49074071,49072650,49072008	Gene ID= ENSG00000243279.3 TPM= 19.12 Transcript Type= protein_coding
chrX	49074429	49079915	49074429	49079915	-	ENST00000376372.8@WDR45	ENST00000376372.8	protein_coding	49079751,49078041,49077837,49077643,49076645,49076430,49075866,49075545,49075364,49075136,49074429	49079915,49078112,49077911,49077747,49076750,49076524,49075945,49075753,49075465,49075281,49074912	Gene ID= ENSG00000196998.17 TPM= 15.14 Transcript Type= protein_coding
chrX	49074658	49079911	49074658	49079911	-	ENST00000485908.6@WDR45	ENST00000485908.6	protein_coding	49079751,49078041,49077837,49076645,49076430,49075866,49075545,49075364,49075136,49074658	49079911,49078112,49077911,49076750,49076524,49075945,49075753,49075465,49075281,49074912	Gene ID= ENSG00000196998.17 TPM= 10.62 Transcript Type= protein_coding
chrX	49074640	49079898	49074640	49079898	-	ENST00000322995.13@WDR45	ENST00000322995.13	protein_coding	49079751,49078041,49077837,49077643,49076645,49076430,49075866,49075545,49075364,49075136,49074640	49079898,49078112,49077911,49077747,49076750,49076524,49075978,49075753,49075465,49075281,49074912	Gene ID= ENSG00000196998.17 TPM= 3.45 Transcript Type= protein_coding
chrX	49074640	49079892	49074640	49079892	-	ENST00000634559.1@WDR45	ENST00000634559.1	protein_coding	49079751,49078041,49077837,49077643,49075866,49075545,49075364,49075136,49074640	49079892,49078112,49077911,49077747,49075945,49075753,49075453,49075281,49074912	Gene ID= ENSG00000196998.17 TPM= 1.06 Transcript Type= protein_coding
chrX	49113389	49123801	49113389	49123801	-	ENST00000156109.6@GPKOW	ENST00000156109.6	protein_coding	49123547,49122622,49122398,49119705,49117597,49117030,49116221,49115891,49115726,49113853,49113389	49123801,49122776,49122522,49119814,49117810,49117162,49116323,49116014,49115795,49113938,49113755	Gene ID= ENSG00000068394.10 TPM= 45.67 Transcript Type= protein_coding
chrX	49162843	49166632	49162843	49166632	+	ENST00000615626.4@MAGIX	ENST00000615626.4	protein_coding	49162843,49163783,49164707,49165190,49166074	49162938,49163929,49164789,49165361,49166632	Gene ID= ENSG00000269313.5 TPM= 1.06 Transcript Type= protein_coding
chrX	49175554	49186392	49175554	49186392	-	ENST00000599218.5@PRICKLE3	ENST00000599218.5	protein_coding	49186256,49184625,49183734,49179693,49179251,49178272,49177993,49176903,49175554	49186392,49184710,49183917,49179806,49179388,49178475,49178179,49177202,49176265	Gene ID= ENSG00000012211.12 TPM= 2.12 Transcript Type= protein_coding
chrX	49235467	49250526	49235467	49250526	+	ENST00000376227.3@CCDC22	ENST00000376227.3	protein_coding	49235467,49237086,49242016,49242886,49243118,49243284,49246731,49247496,49247649,49248191,49248407,49248633,49248817,49249167,49249509,49249651,49250148	49235686,49237263,49242148,49242992,49243184,49243462,49246925,49247558,49247768,49248310,49248523,49248734,49248924,49249262,49249568,49249725,49250526	Gene ID= ENSG00000101997.12 TPM= 30.8 Transcript Type= protein_coding
chrX	49269784	49288095	49269784	49288095	+	transcript1118.chrX.nic@PPP1R3F	transcript1118.chrX.nic	protein_coding	49269784,49281406,49281984,49285834	49270873,49281461,49282063,49288095	Gene ID= ENSG00000049769.12 TPM= 3.19 Transcript Type= NA
chrX	49269854	49288095	49269854	49288095	+	ENST00000055335.10@PPP1R3F	ENST00000055335.10	protein_coding	49269854,49281406,49281981,49285834	49270873,49281461,49282063,49288095	Gene ID= ENSG00000049769.12 TPM= 11.68 Transcript Type= protein_coding
chrX	50588930	50589439	50588930	50589439	-	transcript1122.chrX.nnic@NA	transcript1122.chrX.nnic	NA	50588930	50589439	Gene ID= novel_gene_chrX_1123 TPM= 2.12 Transcript Type= NA
chrX	51332830	51337525	51332830	51337525	+	ENST00000356450.2@NUDT10	ENST00000356450.2	protein_coding	51332830,51336239	51333459,51337525	Gene ID= ENSG00000122824.10 TPM= 1.06 Transcript Type= protein_coding
chrX	51490011	51496596	51490011	51496596	-	ENST00000375992.3@NUDT11	ENST00000375992.3	protein_coding	51495951,51490011	51496596,51491749	Gene ID= ENSG00000196368.4 TPM= 1.06 Transcript Type= protein_coding
chrX	51743431	51746232	51743431	51746232	+	ENST00000340438.5@GSPT2	ENST00000340438.5	protein_coding	51743431	51746232	Gene ID= ENSG00000189369.8 TPM= 4.25 Transcript Type= protein_coding
chrX	51803076	51902354	51803076	51902354	+	transcript1133.chrX.nnic@MAGED1	transcript1133.chrX.nnic	protein_coding	51803076,51884982,51894269,51895053,51896409,51897208,51897547,51897795,51898114,51898285,51898581,51900182,51901553,51902146	51803117,51885055,51894349,51895760,51897077,51897271,51897626,51897886,51898193,51898327,51898643,51900296,51901938,51902354	Gene ID= ENSG00000179222.17 TPM= 29.39 Transcript Type= NA
chrX	51803007	51902354	51803007	51902354	+	ENST00000375772.7@MAGED1	ENST00000375772.7	protein_coding	51803007,51894269,51895053,51896409,51897208,51897547,51897795,51898114,51898285,51898581,51900182,51901553,51902146	51803117,51894349,51895760,51897077,51897271,51897626,51897886,51898193,51898327,51898643,51900296,51901938,51902354	Gene ID= ENSG00000179222.17 TPM= 44.26 Transcript Type= protein_coding
chrX	51893602	51902357	51893602	51902357	+	ENST00000326587.11@MAGED1	ENST00000326587.11	protein_coding	51893602,51894269,51895053,51896409,51897208,51897547,51897795,51898114,51898285,51898581,51900182,51901553,51902146	51893755,51894349,51895760,51897077,51897271,51897626,51897886,51898193,51898327,51898643,51900296,51901938,51902357	Gene ID= ENSG00000179222.17 TPM= 57.01 Transcript Type= protein_coding
chrX	51803726	51806264	51803726	51806264	-	transcript1140.chrX.nnic@NA	transcript1140.chrX.nnic	NA	51803726	51806264	Gene ID= novel_gene_chrX_1141 TPM= 2.12 Transcript Type= NA
chrX	52897400	52908556	52897400	52908556	+	ENST00000593751.7@FAM156B	ENST00000593751.7	protein_coding	52897400,52899468,52900568,52907109	52898726,52899541,52900660,52908556	Gene ID= ENSG00000179304.16 TPM= 6.37 Transcript Type= protein_coding
chrX	52947254	52958484	52947254	52958484	-	ENST00000622447.4@FAM156A	ENST00000622447.4	protein_coding	52956273,52955154,52947254	52958484,52955246,52948705	Gene ID= ENSG00000268350.7 TPM= 6.9 Transcript Type= protein_coding
chrX	52947258	52958414	52947258	52958414	-	ENST00000596733.7@FAM156A	ENST00000596733.7	protein_coding	52957088,52956273,52955154,52947258	52958414,52956346,52955246,52948705	Gene ID= ENSG00000268350.7 TPM= 9.03 Transcript Type= protein_coding
chrX	53082367	53088540	53082367	53088540	+	transcript1148.chrX.nnic@TSPYL2	transcript1148.chrX.nnic	protein_coding	53082367,53083062,53084545,53084755,53084954,53085227,53085631,53087776	53082563,53083305,53084622,53084866,53085099,53085321,53086310,53088540	Gene ID= ENSG00000184205.14 TPM= 6.72 Transcript Type= NA
chrX	53081936	53088540	53081936	53088540	+	transcript1149.chrX.nic@TSPYL2	transcript1149.chrX.nic	protein_coding	53081936,53084532,53084755,53084954,53085227,53085631,53087776	53083305,53084622,53084866,53085099,53085321,53086310,53088540	Gene ID= ENSG00000184205.14 TPM= 10.62 Transcript Type= NA
chrX	53082367	53088540	53082367	53088540	+	ENST00000375442.8@TSPYL2	ENST00000375442.8	protein_coding	53082367,53084545,53084755,53084954,53085227,53085631,53087776	53083305,53084622,53084866,53085099,53085321,53086310,53088540	Gene ID= ENSG00000184205.14 TPM= 40.71 Transcript Type= protein_coding
chrX	53082368	53088540	53082368	53088540	+	transcript1152.chrX.nnic@TSPYL2	transcript1152.chrX.nnic	protein_coding	53082368,53084755,53084954,53085227,53085631,53087776	53082666,53084866,53085099,53085321,53086310,53088540	Gene ID= ENSG00000184205.14 TPM= 5.66 Transcript Type= NA
chrX	53082367	53085290	53082367	53085290	+	transcript1155.chrX.nic@TSPYL2	transcript1155.chrX.nic	protein_coding	53082367,53084545,53084755,53084954,53085227	53083305,53084622,53084866,53085099,53085290	Gene ID= ENSG00000184205.14 TPM= 5.31 Transcript Type= NA
chrX	53143578	53146437	53143578	53146437	+	transcript1158.chrX.nnic@NA	transcript1158.chrX.nnic	NA	53143578	53146437	Gene ID= novel_gene_chrX_1159 TPM= 2.12 Transcript Type= NA
chrX	53266328	53281598	53266328	53281598	-	ENST00000639161.1@IQSEC2	ENST00000639161.1	protein_coding	53281496,53279564,53266328	53281598,53279659,53267064	Gene ID= ENSG00000124313.13 TPM= 6.37 Transcript Type= protein_coding
chrX	53266329	53281594	53266329	53281594	-	ENST00000485377.5@IQSEC2	ENST00000485377.5	protein_coding	53281496,53266329	53281594,53267064	Gene ID= ENSG00000124313.13 TPM= 1.06 Transcript Type= protein_coding
chrX	53374149	53422728	53374149	53422728	-	ENST00000322213.8@SMC1A	ENST00000322213.8	protein_coding	53422492,53414981,53414758,53413232,53412900,53411995,53411761,53409421,53409062,53405771,53405493,53405245,53405012,53403777,53403566,53399589,53396472,53396227,53394778,53383097,53382506,53382232,53381018,53380620,53374149	53422728,53415169,53414870,53413435,53413138,53412253,53411901,53409503,53409269,53405956,53405672,53405391,53405149,53403893,53403672,53399730,53396617,53396380,53394888,53383253,53382660,53382383,53381087,53380730,53380186	Gene ID= ENSG00000072501.17 TPM= 9.56 Transcript Type= protein_coding
chrX	53431258	53434373	53431258	53434373	-	ENST00000168216.10@HSD17B10	ENST00000168216.10	protein_coding	53434319,53433722,53432247,53431988,53431798,53431258	53434373,53433886,53432411,53432116,53431906,53431594	Gene ID= ENSG00000072506.12 TPM= 62.14 Transcript Type= protein_coding
chrX	53431263	53434350	53431263	53434350	-	ENST00000375298.4@HSD17B10	ENST00000375298.4	protein_coding	53434319,53433722,53432247,53431988,53431263	53434350,53433886,53432411,53432116,53431594	Gene ID= ENSG00000072506.12 TPM= 3.72 Transcript Type= protein_coding
chrX	53655916	53658060	53655916	53658060	+	transcript1185.chrX.nnic@NA	transcript1185.chrX.nnic	NA	53655916	53658060	Gene ID= novel_gene_chrX_1186 TPM= 3.19 Transcript Type= NA
chrX	54440401	54445487	54440401	54445487	+	ENST00000375151.4@TSR2	ENST00000375151.4	protein_coding	54440401,54440690,54443400,54444008,54444416	54440502,54440780,54443491,54444184,54445487	Gene ID= ENSG00000158526.7 TPM= 107.28 Transcript Type= protein_coding
chrX	54445454	54496166	54445454	54496166	-	ENST00000375135.3@FGD1	ENST00000375135.3	protein_coding	54495126,54471314,54470583,54470016,54468787,54467784,54465696,54465451,54456509,54456220,54455692,54455448,54450271,54449659,54449143,54448806,54447311,54445454	54496166,54471487,54470760,54470457,54468876,54467932,54465852,54465589,54456567,54456366,54455784,54455527,54450301,54449760,54449268,54448967,54447454,54446414	Gene ID= ENSG00000102302.7 TPM= 15.93 Transcript Type= protein_coding
chrX	54446367	54448030	54446367	54448030	+	transcript1194.chrX.nnic@NA	transcript1194.chrX.nnic	NA	54446367	54448030	Gene ID= novel_gene_chrX_1195 TPM= 3.19 Transcript Type= NA
chrX	54530211	54561071	54530211	54561071	+	ENST00000336470.8@GNL3L	ENST00000336470.8	protein_coding	54530211,54532520,54539040,54540135,54541273,54542955,54543207,54544223,54548229,54550963,54551568,54551832,54552292,54554565,54558436,54560520	54530302,54532585,54539101,54540242,54541389,54543038,54543342,54544326,54548373,54551050,54551742,54551974,54552428,54554692,54558655,54561071	Gene ID= ENSG00000130119.15 TPM= 8.5 Transcript Type= protein_coding
chrX	54560950	54562627	54560950	54562627	+	transcript1204.chrX.nnic@NA	transcript1204.chrX.nnic	NA	54560950	54562627	Gene ID= novel_gene_chrX_1205 TPM= 8.5 Transcript Type= NA
chrX	54562743	54564070	54562743	54564070	-	transcript1210.chrX.nnic@NA	transcript1210.chrX.nnic	NA	54562743	54564070	Gene ID= novel_gene_chrX_1211 TPM= 11.68 Transcript Type= NA
chrX	54563990	54565284	54563990	54565284	+	transcript1208.chrX.nnic@NA	transcript1208.chrX.nnic	NA	54563990	54565284	Gene ID= novel_gene_chrX_1209 TPM= 8.5 Transcript Type= NA
chrX	54564404	54567471	54564404	54567471	-	transcript1214.chrX.nnic@NA	transcript1214.chrX.nnic	NA	54564404	54567471	Gene ID= novel_gene_chrX_1215 TPM= 9.56 Transcript Type= NA
chrX	54807599	54816007	54807599	54816007	+	ENST00000375068.5@MAGED2	ENST00000375068.5	protein_coding	54807599,54809303,54809722,54810821,54811250,54811574,54812157,54812945,54813118,54813488,54814661,54815248,54815881	54807802,54809376,54810213,54811129,54811313,54811653,54812251,54813024,54813160,54813550,54814775,54815690,54816007	Gene ID= ENSG00000102316.16 TPM= 226.47 Transcript Type= protein_coding
chrX	54808371	54816007	54808371	54816007	+	ENST00000375058.5@MAGED2	ENST00000375058.5	protein_coding	54808371,54809303,54809722,54810821,54811250,54811574,54812157,54812945,54813118,54813488,54814661,54815248,54815881	54808433,54809376,54810213,54811129,54811313,54811653,54812251,54813024,54813160,54813550,54814775,54815690,54816007	Gene ID= ENSG00000102316.16 TPM= 65.03 Transcript Type= protein_coding
chrX	54814373	54814657	54814373	54814657	+	transcript1237.chrX.nnic@NA	transcript1237.chrX.nnic	NA	54814373	54814657	Gene ID= novel_gene_chrX_1238 TPM= 2.12 Transcript Type= NA
chrX	55009055	55031064	55009055	55031064	-	ENST00000330807.9@ALAS2	ENST00000330807.9	protein_coding	55030942,55025820,55024718,55023757,55021052,55020320,55017486,55015578,55014747,55013486,55009055	55031064,55026015,55024840,55023867,55021274,55020504,55017665,55015742,55015015,55013648,55009343	Gene ID= ENSG00000158578.18 TPM= 2.12 Transcript Type= protein_coding
chrX	55009055	55030977	55009055	55030977	-	ENST00000396198.7@ALAS2	ENST00000396198.7	protein_coding	55030942,55027751,55025820,55024718,55021052,55020320,55017486,55015578,55014747,55013486,55009055	55030977,55027857,55026015,55024840,55021274,55020504,55017665,55015742,55015015,55013648,55009343	Gene ID= ENSG00000158578.18 TPM= 1.06 Transcript Type= protein_coding
chrX	55145245	55161195	55145245	55161195	-	ENST00000425133.2@FAM104B	ENST00000425133.2	protein_coding	55161137,55159126,55145245	55161195,55159228,55146311	Gene ID= ENSG00000182518.13 TPM= 6.37 Transcript Type= protein_coding
chrX	55452105	55453566	55452105	55453566	+	ENST00000342972.2@MAGEH1	ENST00000342972.2	protein_coding	55452105	55453566	Gene ID= ENSG00000187601.4 TPM= 9.56 Transcript Type= protein_coding
chrX	55717739	55758774	55717739	55758774	+	ENST00000374941.8@RRAGB	ENST00000374941.8	protein_coding	55717739,55719314,55722186,55729294,55731364,55751101,55753392,55755841,55757216,55758246	55718419,55719347,55722285,55729360,55731586,55751196,55753514,55755932,55757331,55758774	Gene ID= ENSG00000083750.12 TPM= 11.68 Transcript Type= protein_coding
chrX	56563577	56566940	56563577	56566940	+	transcript1270.chrX.nnic@NA	transcript1270.chrX.nnic	NA	56563577	56566940	Gene ID= novel_gene_chrX_1271 TPM= 97.72 Transcript Type= NA
chrX	56729259	56818380	56729259	56818380	+	ENST00000374922.8@NBDY	ENST00000374922.8	protein_coding	56729259,56732063,56817320	56729589,56732199,56818380	Gene ID= ENSG00000204272.12 TPM= 3.19 Transcript Type= protein_coding
chrX	56975142	56995730	56975142	56995730	-	ENST00000638873.1@SPIN3	ENST00000638873.1	protein_coding	56995216,56994723,56984266,56978580,56978292,56975142	56995730,56994949,56984478,56978660,56978421,56977196	Gene ID= ENSG00000204271.12 TPM= 1.06 Transcript Type= nonsense_mediated_decay
chrX	56990831	56995738	56990831	56995738	-	ENST00000374919.5@SPIN3	ENST00000374919.5	protein_coding	56995216,56990831	56995738,56994949	Gene ID= ENSG00000204271.12 TPM= 2.12 Transcript Type= protein_coding
chrX	57119683	57121546	57119683	57121546	-	ENST00000333933.3@SPIN2B	ENST00000333933.3	protein_coding	57121238,57119683	57121546,57120631	Gene ID= ENSG00000186787.8 TPM= 4.25 Transcript Type= protein_coding
chrX	57592080	57594764	57592080	57594764	+	transcript1288.chrX.nnic@NA	transcript1288.chrX.nnic	NA	57592080	57594764	Gene ID= novel_gene_chrX_1289 TPM= 4.25 Transcript Type= NA
chrX	57905295	57910449	57905295	57910449	-	transcript1291.chrX.nnic@NA	transcript1291.chrX.nnic	NA	57905295	57910449	Gene ID= novel_gene_chrX_1292 TPM= 5.31 Transcript Type= NA
chrX	63426560	63561049	63426560	63561049	-	ENST00000609143.5@LINC01278	ENST00000609143.5	processed_transcript	63560832,63432364,63426560	63561049,63432491,63428981	Gene ID= ENSG00000235437.7 TPM= 5.31 Transcript Type= sense_overlapping
chrX	63637982	63755124	63637982	63755124	-	transcript1304.chrX.nic@ARHGEF9	transcript1304.chrX.nic	protein_coding	63754315,63724532,63706258,63697125,63678340,63674038,63665886,63655494,63643980,63637982	63755124,63724711,63706449,63697304,63678572,63674167,63666017,63655737,63644048,63638209	Gene ID= ENSG00000131089.15 TPM= 5.66 Transcript Type= NA
chrX	63637982	63785376	63637982	63785376	-	transcript1305.chrX.nic@ARHGEF9	transcript1305.chrX.nic	protein_coding	63785116,63724532,63706258,63697125,63678340,63674038,63665886,63655494,63643980,63637982	63785376,63724711,63706449,63697304,63678572,63674167,63666017,63655737,63644048,63638209	Gene ID= ENSG00000131089.15 TPM= 5.66 Transcript Type= NA
chrX	63637985	63755063	63637985	63755063	-	ENST00000624843.3@ARHGEF9	ENST00000624843.3	protein_coding	63754315,63706258,63697125,63678340,63674038,63665886,63655494,63643980,63637985	63755063,63706449,63697304,63678572,63674167,63666017,63655737,63644048,63638209	Gene ID= ENSG00000131089.15 TPM= 1.41 Transcript Type= protein_coding
chrX	64030598	64033565	64030598	64033565	-	transcript1310.chrX.nnic@NA	transcript1310.chrX.nnic	NA	64030598	64033565	Gene ID= novel_gene_chrX_1311 TPM= 2.12 Transcript Type= NA
chrX	64224196	64230631	64224196	64230631	-	ENST00000362002.2@ASB12	ENST00000362002.2	protein_coding	64230463,64224828,64224196	64230631,64225674,64224468	Gene ID= ENSG00000198881.9 TPM= 22.31 Transcript Type= protein_coding
chrX	65520429	65534808	65520429	65534808	-	transcript1322.chrX.nic@LAS1L	transcript1322.chrX.nic	protein_coding	65534480,65533610,65532561,65531357,65529594,65529212,65528260,65524965,65524564,65524056,65523560,65520429	65534808,65533735,65532630,65531438,65529878,65529258,65528369,65525050,65524614,65524262,65523707,65520817	Gene ID= ENSG00000001497.16 TPM= 6.37 Transcript Type= NA
chrX	65520433	65534808	65520433	65534808	-	transcript1324.chrX.nnic@LAS1L	transcript1324.chrX.nnic	protein_coding	65534480,65533610,65532561,65531357,65529594,65529212,65528260,65524965,65524564,65524056,65523560,65520433	65534808,65533735,65532630,65531438,65529878,65529258,65528369,65525050,65524614,65524262,65523707,65521290	Gene ID= ENSG00000001497.16 TPM= 3.19 Transcript Type= NA
chrX	65512582	65534756	65512582	65534756	-	ENST00000374811.7@LAS1L	ENST00000374811.7	protein_coding	65534480,65533610,65532561,65531357,65529594,65529212,65528260,65524965,65524564,65524056,65523560,65517987,65514823,65512582	65534756,65533735,65532630,65531438,65529878,65529258,65528369,65525050,65524614,65524262,65523707,65518465,65514973,65512901	Gene ID= ENSG00000001497.16 TPM= 6.37 Transcript Type= protein_coding
chrX	65512582	65534754	65512582	65534754	-	ENST00000374807.9@LAS1L	ENST00000374807.9	protein_coding	65534480,65533610,65532561,65531357,65529594,65529212,65528260,65524965,65524056,65523560,65517987,65514823,65512582	65534754,65533735,65532630,65531438,65529878,65529258,65528369,65525050,65524262,65523707,65518465,65514973,65512901	Gene ID= ENSG00000001497.16 TPM= 5.31 Transcript Type= protein_coding
chrX	65667670	65741931	65667670	65741931	+	ENST00000360270.6@MSN	ENST00000360270.6	protein_coding	65667670,65716818,65727814,65729438,65731107,65731838,65733184,65735267,65736795,65737178,65738525,65738970,65739729	65667853,65716901,65727909,65729712,65731190,65731984,65733280,65735430,65736925,65737338,65738617,65739194,65741931	Gene ID= ENSG00000147065.16 TPM= 139.14 Transcript Type= protein_coding
chrX	65667655	65669834	65667655	65669834	+	transcript1334.chrX.nnic@NA	transcript1334.chrX.nnic	NA	65667655	65669834	Gene ID= novel_gene_chrX_1335 TPM= 2.12 Transcript Type= NA
chrX	65724687	65725597	65724687	65725597	-	transcript1336.chrX.nnic@NA	transcript1336.chrX.nnic	NA	65724687	65725597	Gene ID= novel_gene_chrX_1337 TPM= 2.12 Transcript Type= NA
chrX	66021738	66040107	66021738	66040107	-	ENST00000374737.8@VSIG4	ENST00000374737.8	protein_coding	66039944,66033474,66032468,66028050,66027449,66025025,66022841,66021738	66040107,66033830,66032749,66028112,66027526,66025129,66022862,66022500	Gene ID= ENSG00000155659.14 TPM= 2.12 Transcript Type= protein_coding
chrX	66164231	66267386	66164231	66267386	+	transcript1340.chrX.nnic@HEPH	transcript1340.chrX.nnic	protein_coding	66164231,66170558,66172355,66173589,66188359,66189684,66192130,66193502,66195098,66197683,66198878,66203364,66207195,66208115,66255035,66256105,66258840,66260100,66263644,66266440	66164470,66170737,66172599,66173801,66188541,66189938,66192298,66193638,66195229,66197894,66199028,66203577,66207334,66208246,66255141,66256330,66258979,66260262,66263688,66267386	Gene ID= ENSG00000089472.16 TPM= 6.82 Transcript Type= NA
chrX	66164328	66267386	66164328	66267386	+	transcript1343.chrX.nnic@HEPH	transcript1343.chrX.nnic	protein_coding	66164328,66170536,66172355,66173589,66188359,66189684,66192130,66193502,66195098,66203364,66207195,66208115,66255035,66256105,66258840,66260100,66263644,66266440	66164470,66170737,66172599,66173801,66188541,66189938,66192298,66193638,66195229,66203577,66207334,66208246,66255141,66256330,66258979,66260262,66263688,66267386	Gene ID= ENSG00000089472.16 TPM= 5.76 Transcript Type= NA
chrX	66164247	66267386	66164247	66267386	+	transcript1345.chrX.nnic@HEPH	transcript1345.chrX.nnic	protein_coding	66164247,66170558,66172355,66173589,66188359,66189684,66192130,66193502,66195098,66203364,66207195,66208115,66258840,66260100,66263644,66266440	66164470,66170737,66172599,66173801,66188541,66189938,66192298,66193638,66195229,66203577,66207334,66208246,66258979,66260262,66263688,66267386	Gene ID= ENSG00000089472.16 TPM= 4.16 Transcript Type= NA
chrX	66164365	66267346	66164365	66267346	+	ENST00000419594.5@HEPH	ENST00000419594.5	protein_coding	66164365,66170558,66172355,66173589,66188359,66189684,66192130,66193502,66195098,66203364,66207195,66208115,66255035,66256105,66258840,66260100,66263644,66266440	66164470,66170737,66172599,66173801,66188541,66189938,66192298,66193638,66195229,66203577,66207334,66208246,66255141,66256330,66258979,66260262,66263688,66267346	Gene ID= ENSG00000089472.16 TPM= 16.99 Transcript Type= protein_coding
chrX	66164359	66267383	66164359	66267383	+	ENST00000441993.6@HEPH	ENST00000441993.6	protein_coding	66164359,66170558,66172355,66173589,66188359,66189684,66192130,66193502,66195098,66197683,66198878,66200540,66203364,66207195,66208115,66255035,66256105,66258840,66260100,66263644,66266443	66164470,66170737,66172599,66173801,66188541,66189938,66192298,66193638,66195229,66197894,66199028,66200752,66203577,66207334,66208246,66255141,66256330,66258979,66260262,66263688,66267383	Gene ID= ENSG00000089472.16 TPM= 3.45 Transcript Type= protein_coding
chrX	66595637	66639041	66595637	66639041	-	ENST00000374719.7@EDA2R	ENST00000374719.7	protein_coding	66638995,66615934,66605048,66604421,66602633,66599474,66595637	66639041,66616030,66605226,66604506,66602797,66599860,66598093	Gene ID= ENSG00000131080.14 TPM= 3.19 Transcript Type= protein_coding
chrX	67544036	67730619	67544036	67730619	+	ENST00000374690.8@AR	ENST00000374690.8	protein_coding	67544036,67643256,67686010,67711402,67717478,67721833,67722827,67723686	67546762,67643407,67686126,67711689,67717622,67721963,67722984,67730619	Gene ID= ENSG00000169083.16 TPM= 21.24 Transcript Type= protein_coding
chrX	67568889	67724288	67568889	67724288	+	ENST00000396043.2@AR	ENST00000396043.2	protein_coding	67568889,67643256,67686010,67711402,67717478,67721833,67722827,67723686	67569022,67643407,67686126,67711689,67717622,67721963,67722984,67724288	Gene ID= ENSG00000169083.16 TPM= 5.31 Transcript Type= protein_coding
chrX	67682452	67784878	67682452	67784878	-	transcript1365.chrX.nnic@NA	transcript1365.chrX.nnic	NA	67784810,67761873,67689533,67682452	67784878,67761966,67689690,67684576	Gene ID= novel_gene_chrX_1366 TPM= 2.12 Transcript Type= NA
chrX	68498323	68537285	68498323	68537285	+	ENST00000462683.5@YIPF6	ENST00000462683.5	protein_coding	68498323,68511849,68513327,68518770,68521372,68522760,68531881	68499123,68511977,68513405,68518812,68521497,68522917,68537285	Gene ID= ENSG00000181704.11 TPM= 3.19 Transcript Type= protein_coding
chrX	68693651	68725833	68693651	68725833	+	ENST00000374597.3@STARD8	ENST00000374597.3	protein_coding	68693651,68712914,68715294,68716368,68717212,68719225,68720264,68720924,68721536,68722047,68722422,68723626,68723945,68724305	68693826,68712985,68715375,68716431,68718629,68719398,68720423,68721122,68721746,68722161,68722646,68723843,68724121,68725833	Gene ID= ENSG00000130052.13 TPM= 4.25 Transcript Type= protein_coding
chrX	68828997	68842147	68828997	68842147	+	ENST00000204961.4@EFNB1	ENST00000204961.4	protein_coding	68828997,68838617,68839664,68839960,68840242	68829904,68838894,68839756,68840088,68842147	Gene ID= ENSG00000090776.5 TPM= 43.55 Transcript Type= protein_coding
chrX	69160862	69165521	69160862	69165521	-	ENST00000361478.1@PJA1	ENST00000361478.1	protein_coding	69165372,69160862	69165521,69163466	Gene ID= ENSG00000181191.11 TPM= 13.81 Transcript Type= protein_coding
chrX	69160891	69165793	69160891	69165793	-	ENST00000374571.4@PJA1	ENST00000374571.4	protein_coding	69165372,69160891	69165793,69163140	Gene ID= ENSG00000181191.11 TPM= 36.11 Transcript Type= protein_coding
chrX	70133463	70166324	70133463	70166324	+	ENST00000356413.4@IGBP1	ENST00000356413.4	protein_coding	70133463,70133723,70134523,70146633,70148761,70150210,70165833	70133540,70134135,70134816,70146828,70148840,70150322,70166324	Gene ID= ENSG00000089289.15 TPM= 38.24 Transcript Type= protein_coding
chrX	70286595	70289979	70286595	70289979	-	ENST00000239666.8@PDZD11	ENST00000239666.8	protein_coding	70289860,70289255,70288430,70288117,70287732,70287276,70286595	70289979,70289354,70288513,70288173,70287830,70287336,70287116	Gene ID= ENSG00000120509.10 TPM= 35.05 Transcript Type= protein_coding
chrX	70427354	70435316	70427354	70435316	-	transcript1399.chrX.nnic@AL139398.1	transcript1399.chrX.nnic	antisense_RNA	70434679,70433855,70431191,70427354	70435316,70434248,70431307,70427912	Gene ID= ENSG00000284391.1 TPM= 2.12 Transcript Type= NA
chrX	70427450	70435350	70427450	70435350	-	ENST00000638795.1@AL139398.1	ENST00000638795.1	antisense_RNA	70434679,70433855,70427450	70435350,70434248,70427912	Gene ID= ENSG00000284391.1 TPM= 1.06 Transcript Type= antisense_RNA
chrX	70452305	70505487	70452305	70505487	+	ENST00000374355.7@DLG3	ENST00000374355.7	protein_coding	70452305,70453637,70454214,70479150,70492107,70492521,70493376,70497180,70498520,70499176,70499877,70500471,70500898,70502163	70452755,70453793,70454316,70479264,70492283,70492596,70493475,70497221,70498570,70499277,70500049,70500580,70500989,70505487	Gene ID= ENSG00000082458.11 TPM= 2.12 Transcript Type= protein_coding
chrX	70452315	70505485	70452315	70505485	+	transcript1409.chrX.nnic@DLG3	transcript1409.chrX.nnic	protein_coding	70452315,70453637,70454214,70479150,70492107,70492521,70493376,70497180,70498520,70499176,70499877,70500471,70500898,70502163	70452536,70453793,70454316,70479264,70492283,70492596,70493475,70497221,70498570,70499277,70500049,70500580,70500989,70505485	Gene ID= ENSG00000082458.11 TPM= 3.19 Transcript Type= NA
chrX	70455096	70505485	70455096	70505485	+	ENST00000542398.1@DLG3	ENST00000542398.1	protein_coding	70455096,70479150,70492107,70492521,70493376,70497180,70498520,70499176,70499877,70500471,70500898,70502163	70455263,70479264,70492283,70492596,70493475,70497221,70498570,70499277,70500049,70500580,70500989,70505485	Gene ID= ENSG00000082458.11 TPM= 2.12 Transcript Type= protein_coding
chrX	70962964	70963293	70962964	70963293	+	ENST00000429775.2@RPS23P8	ENST00000429775.2	processed_pseudogene	70962964	70963293	Gene ID= ENSG00000230629.2 TPM= 5.31 Transcript Type= processed_pseudogene
chrX	71059246	71068423	71059246	71068423	-	ENST00000374274.7@SNX12	ENST00000374274.7	protein_coding	71068142,71062854,71061843,71059246	71068423,71062949,71061967,71061118	Gene ID= ENSG00000147164.11 TPM= 30.8 Transcript Type= protein_coding
chrX	71096197	71103535	71096197	71103535	+	ENST00000374259.7@FOXO4	ENST00000374259.7	protein_coding	71096197,71100684,71102077	71096981,71101740,71103535	Gene ID= ENSG00000184481.16 TPM= 9.56 Transcript Type= protein_coding
chrX	71118556	71142453	71118556	71142453	+	ENST00000333646.10@MED12	ENST00000333646.10	protein_coding	71118556,71119373,71119686,71120014,71120971,71121327,71121562,71122200,71122508,71122738,71123095,71123594,71124159,71124764,71124976,71125351,71125663,71126036,71126341,71126969,71127336,71127893,71128296,71128598,71129114,71129316,71129680,71130035,71131550,71132073,71132377,71132845,71133123,71134357,71134713,71135092,71136281,71136879,71137187,71137558,71137726,71140635,71141230,71141883,71142175	71118853,71119477,71119877,71120170,71121152,71121437,71121816,71122346,71122607,71122874,71123226,71123720,71124388,71124844,71125146,71125495,71125713,71126154,71126484,71127132,71127467,71128120,71128440,71128718,71129215,71129429,71129855,71130214,71131621,71132206,71132538,71132956,71133212,71134466,71134848,71135253,71136655,71137029,71137392,71137635,71137943,71140857,71141370,71141964,71142453	Gene ID= ENSG00000184634.15 TPM= 10.62 Transcript Type= protein_coding
chrX	71136571	71138762	71136571	71138762	+	transcript1423.chrX.nnic@NA	transcript1423.chrX.nnic	NA	71136571	71138762	Gene ID= novel_gene_chrX_1424 TPM= 2.12 Transcript Type= NA
chrX	71249204	71254162	71249204	71254162	-	transcript1427.chrX.nic@ZMYM3	transcript1427.chrX.nic	protein_coding	71254029,71252589,71251558,71251178,71250432,71249204	71254162,71253274,71251601,71251244,71250726,71250203	Gene ID= ENSG00000147130.14 TPM= 5.31 Transcript Type= NA
chrX	71249204	71254575	71249204	71254575	-	ENST00000373981.5@ZMYM3	ENST00000373981.5	protein_coding	71254481,71252589,71251558,71251178,71250432,71250026,71249204	71254575,71253274,71251601,71251244,71250726,71250203,71249679	Gene ID= ENSG00000147130.14 TPM= 4.25 Transcript Type= protein_coding
chrX	71283583	71301168	71283583	71301168	+	ENST00000276079.12@NONO	ENST00000276079.12	protein_coding	71283583,71284397,71290629,71291779,71294227,71296565,71296851,71297377,71297836,71298469,71298707,71299942	71283721,71284453,71290791,71291972,71294528,71296660,71297047,71297461,71297938,71298508,71298816,71301168	Gene ID= ENSG00000147140.15 TPM= 138.08 Transcript Type= protein_coding
chrX	71283633	71301168	71283633	71301168	+	ENST00000373841.5@NONO	ENST00000373841.5	protein_coding	71283633,71290629,71291779,71294227,71296565,71296851,71297377,71297836,71298469,71298707,71299942	71283721,71290791,71291972,71294528,71296660,71297047,71297461,71297938,71298508,71298816,71301168	Gene ID= ENSG00000147140.15 TPM= 13.81 Transcript Type= protein_coding
chrX	71301734	71305371	71301734	71305371	+	ENST00000373829.7@ITGB1BP2	ENST00000373829.7	protein_coding	71301734,71302137,71302277,71302411,71303262,71303461,71303627,71303812,71304187,71304542,71304965	71301870,71302186,71302333,71302556,71303356,71303516,71303697,71303911,71304300,71304604,71305371	Gene ID= ENSG00000147166.10 TPM= 16.99 Transcript Type= protein_coding
chrX	71307989	71309371	71307989	71309371	-	transcript1442.chrX.nnic@NA	transcript1442.chrX.nnic	NA	71307989	71309371	Gene ID= novel_gene_chrX_1443 TPM= 2.12 Transcript Type= NA
chrX	71366264	71466005	71366264	71466005	+	ENST00000373790.8@TAF1	ENST00000373790.8	protein_coding	71366264,71367499,71368054,71375167,71377013,71377603,71378235,71378824,71381743,71382536,71382761,71382991,71383962,71384945,71387261,71388237,71388738,71389585,71392569,71392875,71393301,71394067,71397253,71398572,71401528,71406638,71407574,71407974,71421309,71423117,71423974,71424154,71454170,71454741,71458241,71459552,71460626,71463824	71366494,71367613,71368170,71375286,71377191,71377821,71378453,71379031,71381919,71382663,71382868,71383164,71384135,71385049,71387461,71388378,71388868,71389665,71392718,71392994,71393476,71394245,71397466,71398737,71401739,71406746,71407672,71408151,71421376,71423239,71424066,71424238,71454237,71454857,71458366,71459708,71460803,71466005	Gene ID= ENSG00000147133.15 TPM= 5.31 Transcript Type= protein_coding
chrX	71412124	71413782	71412124	71413782	-	transcript1451.chrX.nnic@NA	transcript1451.chrX.nnic	NA	71412124	71413782	Gene ID= novel_gene_chrX_1452 TPM= 5.31 Transcript Type= NA
chrX	71533083	71575897	71533083	71575897	+	ENST00000373719.7@OGT	ENST00000373719.7	protein_coding	71533083,71536178,71537829,71544567,71547907,71554513,71555190,71555954,71556680,71556952,71557195,71557493,71559267,71559588,71561775,71562847,71563130,71563329,71564601,71567500,71567993,71573620	71533336,71536358,71538072,71544635,71548023,71554592,71555385,71556094,71556780,71557105,71557296,71557672,71559425,71559677,71561900,71563017,71563246,71563499,71564753,71567752,71568116,71575897	Gene ID= ENSG00000147162.13 TPM= 10.62 Transcript Type= protein_coding
chrX	71535127	71540282	71535127	71540282	-	transcript1454.chrX.nnic@NA	transcript1454.chrX.nnic	NA	71535127	71540282	Gene ID= novel_gene_chrX_1455 TPM= 6.37 Transcript Type= NA
chrX	72127110	72131901	72127110	72131901	-	ENST00000479991.1@RTL5	ENST00000479991.1	protein_coding	72128164,72127110	72131901,72127710	Gene ID= ENSG00000242732.4 TPM= 10.62 Transcript Type= nonsense_mediated_decay
chrX	72181679	72198344	72181679	72198344	+	ENST00000373669.6@PIN4	ENST00000373669.6	protein_coding	72181679,72186461,72196785,72197368	72181828,72186534,72196904,72198344	Gene ID= ENSG00000102309.12 TPM= 3.19 Transcript Type= protein_coding
chrX	72181737	72197545	72181737	72197545	+	transcript1468.chrX.nnic@PIN4	transcript1468.chrX.nnic	protein_coding	72181737,72196785,72197368	72181828,72196904,72197545	Gene ID= ENSG00000102309.12 TPM= 5.31 Transcript Type= NA
chrX	72301640	72305914	72301640	72305914	-	ENST00000431381.5@CITED1	ENST00000431381.5	protein_coding	72305825,72305302,72302810,72301640	72305914,72305422,72302934,72302244	Gene ID= ENSG00000125931.10 TPM= 1.06 Transcript Type= protein_coding
chrX	72301647	72307187	72301647	72307187	-	ENST00000373619.7@CITED1	ENST00000373619.7	protein_coding	72307025,72302810,72301647	72307187,72302934,72302244	Gene ID= ENSG00000125931.10 TPM= 1.06 Transcript Type= protein_coding
chrX	72329516	72573103	72329516	72573103	-	ENST00000373573.7@HDAC8	ENST00000373573.7	protein_coding	72572651,72572057,72568754,72567889,72495156,72490929,72488933,72464559,72462004,72351733,72329516	72573103,72572109,72568884,72568030,72495268,72491006,72489041,72464731,72462098,72351838,72330076	Gene ID= ENSG00000147099.19 TPM= 10.09 Transcript Type= protein_coding
chrX	72329516	72572856	72329516	72572856	-	transcript1479.chrX.nic@HDAC8	transcript1479.chrX.nic	protein_coding	72572651,72572057,72568754,72567889,72495156,72488933,72464559,72462004,72351733,72329516	72572856,72572109,72568884,72568030,72495268,72489041,72464731,72462098,72351838,72330076	Gene ID= ENSG00000147099.19 TPM= 3.19 Transcript Type= NA
chrX	72473416	72573048	72473416	72573048	-	ENST00000439122.6@HDAC8	ENST00000439122.6	protein_coding	72572651,72572057,72568754,72567889,72495156,72490929,72488933,72473416	72573048,72572109,72568884,72568030,72495268,72491006,72489041,72474729	Gene ID= ENSG00000147099.19 TPM= 2.66 Transcript Type= protein_coding
chrX	72567582	72572813	72567582	72572813	-	ENST00000373556.7@HDAC8	ENST00000373556.7	protein_coding	72572651,72572057,72568754,72567889,72567582	72572813,72572109,72568884,72568030,72567796	Gene ID= ENSG00000147099.19 TPM= 1.06 Transcript Type= protein_coding
chrX	72578814	72714040	72578814	72714040	-	ENST00000373542.8@PHKA1	ENST00000373542.8	protein_coding	72713803,72712779,72705198,72695708,72684498,72676070,72667375,72666151,72657588,72656120,72653435,72652544,72650390,72644362,72636277,72635155,72626971,72623109,72620725,72619214,72618710,72611028,72609624,72605541,72605271,72603119,72602158,72601991,72593104,72584249,72582398,72578814	72714040,72712937,72705245,72695876,72684580,72676150,72667473,72666297,72657641,72656242,72653530,72652651,72650468,72644496,72636386,72635299,72627049,72623275,72620901,72619305,72618849,72611184,72609703,72605619,72605400,72603220,72602273,72602029,72593274,72584302,72582598,72581175	Gene ID= ENSG00000067177.14 TPM= 1.06 Transcript Type= protein_coding
chrX	73212299	73214848	73212299	73214848	-	ENST00000373517.3@NAP1L2	ENST00000373517.3	protein_coding	73212299	73214848	Gene ID= ENSG00000186462.8 TPM= 7.44 Transcript Type= protein_coding
chrX	73820656	73852753	73820656	73852753	-	ENST00000429829.5@XIST	ENST00000429829.5	lincRNA	73841382,73837440,73833238,73831066,73829068,73820656	73852753,73837503,73833374,73831274,73829231,73827984	Gene ID= ENSG00000229807.10 TPM= 30.8 Transcript Type= lincRNA
chrX	73833433	73835006	73833433	73835006	+	transcript1497.chrX.nnic@NA	transcript1497.chrX.nnic	NA	73833433	73835006	Gene ID= novel_gene_chrX_1498 TPM= 2.12 Transcript Type= NA
chrX	73944324	74004551	73944324	74004551	+	ENST00000602920.5@JPX	ENST00000602920.5	lincRNA	73944324,73944584,73994840,74004270	73944465,73944662,73994961,74004551	Gene ID= ENSG00000225470.7 TPM= 3.72 Transcript Type= lincRNA
chrX	73944324	73947334	73944324	73947334	+	transcript1514.chrX.nic@JPX	transcript1514.chrX.nic	lincRNA	73944324,73944584,73946999	73944465,73944662,73947334	Gene ID= ENSG00000225470.7 TPM= 9.03 Transcript Type= NA
chrX	74208167	74209114	74208167	74209114	-	transcript1518.chrX.nnic@NA	transcript1518.chrX.nnic	NA	74208167	74209114	Gene ID= novel_gene_chrX_1519 TPM= 2.12 Transcript Type= NA
chrX	74266557	74269028	74266557	74269028	+	transcript1526.chrX.nnic@NA	transcript1526.chrX.nnic	NA	74266557	74269028	Gene ID= novel_gene_chrX_1527 TPM= 2.12 Transcript Type= NA
chrX	74272250	74274201	74272250	74274201	+	transcript1522.chrX.nnic@NA	transcript1522.chrX.nnic	NA	74272250	74274201	Gene ID= novel_gene_chrX_1523 TPM= 12.75 Transcript Type= NA
chrX	74273150	74277295	74273150	74277295	+	transcript1524.chrX.nnic@NA	transcript1524.chrX.nnic	NA	74273150	74277295	Gene ID= novel_gene_chrX_1525 TPM= 7.44 Transcript Type= NA
chrX	74421461	74533917	74421461	74533917	+	ENST00000587091.5@SLC16A2	ENST00000587091.5	protein_coding	74421461,74520990,74524359,74525750,74529213,74531333	74422067,74521134,74524809,74525893,74529441,74533917	Gene ID= ENSG00000147100.10 TPM= 10.62 Transcript Type= protein_coding
chrX	75053280	75156297	75053280	75156297	-	ENST00000253577.7@ABCB7	ENST00000253577.7	protein_coding	75156105,75114754,75112886,75098942,75076522,75075362,75073868,75073689,75071509,75070365,75069291,75069007,75065070,75062328,75060223,75053280	75156297,75114834,75112972,75099061,75076654,75075630,75073956,75073776,75071683,75070522,75069454,75069136,75065241,75062431,75060330,75053585	Gene ID= ENSG00000131269.15 TPM= 19.12 Transcript Type= protein_coding
chrX	75072927	75156302	75072927	75156302	-	transcript1546.chrX.nic@ABCB7	transcript1546.chrX.nic	protein_coding	75156105,75114754,75112886,75098942,75076522,75072927	75156302,75114831,75112972,75099061,75076654,75075630	Gene ID= ENSG00000131269.15 TPM= 2.12 Transcript Type= NA
chrX	75053284	75156280	75053284	75156280	-	ENST00000373394.7@ABCB7	ENST00000373394.7	protein_coding	75156105,75114754,75112886,75098942,75076522,75075362,75073868,75073689,75071509,75070365,75069291,75069007,75065070,75062328,75060223,75053284	75156280,75114831,75112972,75099061,75076654,75075630,75073956,75073776,75071683,75070522,75069454,75069136,75065241,75062431,75060330,75053585	Gene ID= ENSG00000131269.15 TPM= 16.99 Transcript Type= protein_coding
chrX	75274088	75304600	75274088	75304600	+	ENST00000373383.8@UPRT	ENST00000373383.8	protein_coding	75274088,75293472,75296342,75297491,75299735,75300867,75303405	75274640,75293514,75296411,75297553,75299896,75300965,75304600	Gene ID= ENSG00000094841.13 TPM= 12.75 Transcript Type= protein_coding
chrX	75274090	75304600	75274090	75304600	+	ENST00000373379.5@UPRT	ENST00000373379.5	protein_coding	75274090,75293472,75296342,75297491,75299735,75300867,75303405	75274640,75293514,75296411,75297553,75299896,75301015,75304600	Gene ID= ENSG00000094841.13 TPM= 1.06 Transcript Type= protein_coding
chrX	75744582	75747175	75744582	75747175	-	transcript1558.chrX.nnic@NA	transcript1558.chrX.nnic	NA	75744582	75747175	Gene ID= novel_gene_chrX_1559 TPM= 16.99 Transcript Type= NA
chrX	76172936	76178204	76172936	76178204	+	ENST00000373358.7@PBDC1	ENST00000373358.7	protein_coding	76172936,76173585,76174890,76175473,76176881,76177616	76173168,76173650,76174949,76175613,76176992,76178204	Gene ID= ENSG00000102390.10 TPM= 20.18 Transcript Type= protein_coding
chrX	77447405	77457278	77447405	77457278	+	ENST00000439435.2@FGF16	ENST00000439435.2	protein_coding	77447405,77454157,77456277	77447948,77454260,77457278	Gene ID= ENSG00000196468.7 TPM= 1.06 Transcript Type= protein_coding
chrX	77504878	77786269	77504878	77786269	-	ENST00000373344.9@ATRX	ENST00000373344.9	protein_coding	77785982,77717131,77698574,77697583,77696577,77693824,77688818,77684939,77681520,77676226,77664645,77663382,77656560,77654098,77652114,77635915,77634594,77633566,77633207,77620395,77618806,77616613,77600434,77599732,77599411,77593696,77589834,77574250,77558669,77557451,77523252,77522263,77521403,77520788,77504878	77786269,77717243,77698629,77697635,77696704,77693937,77688927,77685006,77684593,77676298,77664778,77663558,77656653,77654200,77652353,77636056,77634703,77633712,77633384,77620532,77618981,77616730,77600564,77599820,77599580,77593849,77589940,77574358,77558846,77557645,77523401,77522388,77521498,77520916,77508629	Gene ID= ENSG00000085224.21 TPM= 2.12 Transcript Type= protein_coding
chrX	77826364	77895435	77826364	77895435	-	transcript1605.chrX.nnic@MAGT1	transcript1605.chrX.nnic	protein_coding	77895309,77875428,77870808,77857357,77856733,77855501,77853901,77841246,77830805,77828611,77826364	77895435,77875597,77870925,77857497,77856873,77855590,77853964,77841320,77830895,77829235,77828034	Gene ID= ENSG00000102158.19 TPM= 5.52 Transcript Type= NA
chrX	77826365	77895425	77826365	77895425	-	transcript1606.chrX.nnic@MAGT1	transcript1606.chrX.nnic	protein_coding	77895309,77875428,77870808,77857357,77856733,77855501,77853901,77841246,77830805,77829031,77826365	77895425,77875597,77870925,77857497,77856873,77855590,77853964,77841320,77830895,77829235,77826809	Gene ID= ENSG00000102158.19 TPM= 2.12 Transcript Type= NA
chrX	77826366	77895444	77826366	77895444	-	transcript1607.chrX.nnic@MAGT1	transcript1607.chrX.nnic	protein_coding	77895309,77875428,77870808,77857357,77856733,77855501,77853901,77841246,77830805,77828551,77826366	77895444,77875597,77870925,77857497,77856873,77855590,77853964,77841320,77830895,77829235,77828028	Gene ID= ENSG00000102158.19 TPM= 3.4 Transcript Type= NA
chrX	77827461	77895431	77827461	77895431	-	ENST00000618282.4@MAGT1	ENST00000618282.4	protein_coding	77895309,77875428,77870808,77857357,77856733,77855501,77853901,77841246,77830805,77827461	77895431,77875597,77870925,77857497,77856873,77855590,77853964,77841320,77830895,77829235	Gene ID= ENSG00000102158.19 TPM= 3.4 Transcript Type= protein_coding
chrX	77868108	77895440	77868108	77895440	-	ENST00000373336.3@MAGT1	ENST00000373336.3	protein_coding	77895309,77875428,77870808,77868108	77895440,77875597,77870925,77868649	Gene ID= ENSG00000102158.19 TPM= 1.06 Transcript Type= protein_coding
chrX	77899438	77907373	77899438	77907373	+	ENST00000481445.1@COX7B	ENST00000481445.1	protein_coding	77899438,77902643,77905184	77899593,77902767,77907373	Gene ID= ENSG00000131174.4 TPM= 599.06 Transcript Type= protein_coding
chrX	77899469	77905385	77899469	77905385	+	transcript1621.chrX.nnic@COX7B	transcript1621.chrX.nnic	protein_coding	77899469,77905184	77899593,77905385	Gene ID= ENSG00000131174.4 TPM= 25.49 Transcript Type= NA
chrX	77900326	77902314	77900326	77902314	-	transcript1622.chrX.nnic@NA	transcript1622.chrX.nnic	NA	77900326	77902314	Gene ID= novel_gene_chrX_1623 TPM= 4.25 Transcript Type= NA
chrX	78129748	78139706	78129748	78139706	-	ENST00000341864.5@TAF9B	ENST00000341864.5	protein_coding	78139561,78138843,78137962,78137749,78136915,78133338,78129748	78139706,78138924,78138098,78137883,78136990,78133448,78131773	Gene ID= ENSG00000187325.4 TPM= 39.3 Transcript Type= protein_coding
chrX	79360384	79367580	79360384	79367580	-	transcript1654.chrX.nic@ITM2A	transcript1654.chrX.nic	protein_coding	79367547,79367105,79363423,79362942,79362581,79361329,79360384	79367580,79367273,79363554,79363139,79362691,79361479,79361177	Gene ID= ENSG00000078596.10 TPM= 2.84 Transcript Type= NA
chrX	79360388	79367552	79360388	79367552	-	ENST00000434584.2@ITM2A	ENST00000434584.2	protein_coding	79367105,79362942,79362581,79361329,79360388	79367552,79363139,79362691,79361479,79361177	Gene ID= ENSG00000078596.10 TPM= 2.84 Transcript Type= protein_coding
chrX	79360384	79367359	79360384	79367359	-	ENST00000373298.6@ITM2A	ENST00000373298.6	protein_coding	79367105,79363423,79362942,79362581,79361329,79360384	79367359,79363554,79363139,79362691,79361479,79361177	Gene ID= ENSG00000078596.10 TPM= 48.51 Transcript Type= protein_coding
chrX	81201943	81298547	81201943	81298547	+	ENST00000373212.5@SH3BGRL	ENST00000373212.5	protein_coding	81201943,81276984,81278331,81297195	81202245,81277169,81278411,81298547	Gene ID= ENSG00000131171.12 TPM= 31.86 Transcript Type= protein_coding
chrX	85003826	85088063	85003826	85088063	+	ENST00000373173.6@APOOL	ENST00000373173.6	protein_coding	85003826,85046446,85051389,85054344,85055827,85067127,85073998,85074274,85087590	85003927,85046550,85051508,85054398,85055925,85067218,85074111,85074391,85088063	Gene ID= ENSG00000155008.13 TPM= 2.12 Transcript Type= protein_coding
chrX	85277396	85379743	85277396	85379743	-	ENST00000262753.8@POF1B	ENST00000262753.8	protein_coding	85379639,85379173,85367692,85359550,85351350,85345860,85330949,85315707,85314432,85308124,85307163,85306181,85305791,85304343,85303406,85282203,85277396	85379743,85379495,85367766,85359630,85351451,85346042,85331079,85315734,85314506,85308216,85307276,85306333,85305910,85304471,85303488,85282317,85279426	Gene ID= ENSG00000124429.17 TPM= 4.25 Transcript Type= protein_coding
chrX	85861180	86047562	85861180	86047562	-	ENST00000357749.6@CHM	ENST00000357749.6	protein_coding	86047484,86027491,85981737,85978767,85963665,85958861,85957855,85956153,85911261,85901084,85900646,85894188,85878965,85873052,85861180	86047562,86027557,85981809,85978891,85964052,85958977,85957975,85956378,85911338,85901188,85900709,85894284,85879063,85873212,85864821	Gene ID= ENSG00000188419.13 TPM= 7.44 Transcript Type= protein_coding
chrX	86045340	86047557	86045340	86047557	-	transcript1682.chrX.nnic@NA	transcript1682.chrX.nnic	NA	86045340	86047557	Gene ID= novel_gene_chrX_1683 TPM= 2.12 Transcript Type= NA
chrX	91434824	91438584	91434824	91438584	+	ENST00000312600.3@PABPC5	ENST00000312600.3	protein_coding	91434824,91435435	91434894,91438584	Gene ID= ENSG00000174740.7 TPM= 1.06 Transcript Type= protein_coding
chrX	93670930	93673568	93670930	93673568	-	ENST00000373079.3@NAP1L3	ENST00000373079.3	protein_coding	93670930	93673568	Gene ID= ENSG00000186310.9 TPM= 24.43 Transcript Type= protein_coding
chrX	96684796	97469835	96684796	97469835	+	transcript1692.chrX.nic@DIAPH2	transcript1692.chrX.nic	protein_coding	96684796,96735758,96738586,96758154,96763100,96881579,96912328,96912483,96916438,96918509,96930733,96937233,96939266,96942018,96945527,96948935,96957828,96965093,97072941,97075167,97099694,97114726,97141665,97247715,97348116,97383909,97429650,97469694	96685190,96735790,96738762,96758258,96763120,96881718,96912402,96912552,96916574,96918617,96930843,96937351,96939382,96942136,96945591,96949039,96958148,96965207,97073042,97075261,97099795,97114965,97141794,97247839,97348280,97384044,97429745,97469835	Gene ID= ENSG00000147202.17 TPM= 2.12 Transcript Type= NA
chrX	96684796	97599685	96684796	97599685	+	transcript1693.chrX.nic@DIAPH2	transcript1693.chrX.nic	protein_coding	96684796,96735758,96738586,96758154,96763100,96881579,96912328,96912483,96916438,96918509,96930733,96937233,96939266,96942018,96945527,96948935,96957828,96965093,97072941,97075167,97099694,97114726,97141665,97247715,97348116,97383909,97429650,97599253	96685190,96735790,96738762,96758258,96763120,96881718,96912402,96912552,96916574,96918617,96930843,96937351,96939382,96942136,96945591,96949039,96958148,96965207,97073042,97075261,97099795,97114965,97141794,97247839,97348280,97384044,97429745,97599685	Gene ID= ENSG00000147202.17 TPM= 2.12 Transcript Type= NA
chrX	96684712	97469835	96684712	97469835	+	ENST00000373049.8@DIAPH2	ENST00000373049.8	protein_coding	96684712,96735758,96738586,96758154,96881579,96912328,96912483,96916438,96918509,96930733,96937233,96939266,96942018,96945527,96948935,96957828,96965093,97072941,97075167,97099694,97114726,97141665,97247715,97348116,97383909,97429650,97469694	96685190,96735790,96738762,96758258,96881718,96912402,96912552,96916574,96918617,96930843,96937351,96939382,96942136,96945591,96949039,96958148,96965207,97073042,97075261,97099795,97114965,97141794,97247839,97348280,97384044,97429745,97469835	Gene ID= ENSG00000147202.17 TPM= 7.97 Transcript Type= protein_coding
chrX	96684712	97604997	96684712	97604997	+	ENST00000324765.12@DIAPH2	ENST00000324765.12	protein_coding	96684712,96735758,96738586,96758154,96881579,96912328,96912483,96916438,96918509,96930733,96937233,96939266,96942018,96945527,96948935,96957828,96965093,97072941,97075167,97099694,97114726,97141665,97247715,97348116,97383909,97429650,97599253	96685190,96735790,96738762,96758258,96881718,96912402,96912552,96916574,96918617,96930843,96937351,96939382,96942136,96945591,96949039,96958148,96965207,97073042,97075261,97099795,97114965,97141794,97247839,97348280,97384044,97429745,97604997	Gene ID= ENSG00000147202.17 TPM= 5.84 Transcript Type= protein_coding
chrX	96921699	96922388	96921699	96922388	-	transcript1697.chrX.nnic@NA	transcript1697.chrX.nnic	NA	96921699	96922388	Gene ID= novel_gene_chrX_1698 TPM= 2.12 Transcript Type= NA
chrX	100584802	100599885	100584802	100599885	+	ENST00000373031.4@TNMD	ENST00000373031.4	protein_coding	100584802,100585231,100593895,100594261,100597504,100599016,100599508	100585066,100585362,100594035,100594362,100597657,100599182,100599885	Gene ID= ENSG00000000005.5 TPM= 4.25 Transcript Type= protein_coding
chrX	100628670	100636806	100628670	100636806	-	ENST00000373020.8@TSPAN6	ENST00000373020.8	protein_coding	100636608,100635558,100635178,100633931,100633405,100632485,100630759,100628670	100636806,100635746,100635252,100634029,100633539,100632568,100630866,100629986	Gene ID= ENSG00000000003.14 TPM= 4.25 Transcript Type= protein_coding
chrX	100657351	100660286	100657351	100660286	-	transcript1702.chrX.nnic@NA	transcript1702.chrX.nnic	NA	100657351	100660286	Gene ID= novel_gene_chrX_1703 TPM= 8.5 Transcript Type= NA
chrX	100820401	100840918	100820401	100840918	+	ENST00000372972.6@CSTF2	ENST00000372972.6	protein_coding	100820401,100821527,100822251,100823292,100823886,100824120,100826634,100828040,100831515,100832734,100833180,100837339,100838239,100840714	100820474,100821605,100822420,100823428,100824005,100824257,100826757,100828102,100831656,100832909,100833472,100837449,100838364,100840918	Gene ID= ENSG00000101811.13 TPM= 8.5 Transcript Type= protein_coding
chrX	101009346	101052116	101009346	101052116	-	ENST00000545398.5@TRMT2B	ENST00000545398.5	protein_coding	101051784,101042042,101041317,101037917,101036974,101035613,101023470,101021968,101021101,101020487,101019284,101018971,101009346	101052116,101042312,101041371,101038051,101037073,101035683,101023616,101022062,101021315,101020588,101019403,101019070,101010707	Gene ID= ENSG00000188917.14 TPM= 1.06 Transcript Type= protein_coding
chrX	101345661	101349196	101345661	101349196	-	ENST00000372902.3@TIMM8A	ENST00000372902.3	protein_coding	101348533,101345661	101349196,101346660	Gene ID= ENSG00000126953.5 TPM= 4.25 Transcript Type= protein_coding
chrX	101347437	101348749	101347437	101348749	-	ENST00000480575.1@TIMM8A	ENST00000480575.1	protein_coding	101348533,101347437	101348749,101348401	Gene ID= ENSG00000126953.5 TPM= 1.06 Transcript Type= processed_transcript
chrX	101390983	101395795	101390983	101395795	+	ENST00000553110.7@RPL36A	ENST00000553110.7	protein_coding	101390983,101391459,101391755,101395335,101395728	101391046,101391564,101391822,101395457,101395795	Gene ID= ENSG00000241343.9 TPM= 4.25 Transcript Type= protein_coding
chrX	101397803	101407925	101397803	101407925	-	ENST00000218516.3@GLA	ENST00000218516.3	protein_coding	101407710,101403811,101401632,101400666,101398785,101398370,101397803	101407925,101403985,101401809,101400757,101398946,101398567,101398099	Gene ID= ENSG00000102393.9 TPM= 2.12 Transcript Type= protein_coding
chrX	101408186	101414133	101408186	101414133	+	transcript1726.chrX.nnic@HNRNPH2	transcript1726.chrX.nnic	protein_coding	101408186,101411936	101408307,101414133	Gene ID= ENSG00000126945.8 TPM= 30.8 Transcript Type= NA
chrX	101408295	101414133	101408295	101414133	+	ENST00000316594.5@HNRNPH2	ENST00000316594.5	protein_coding	101408295,101411936	101408319,101414133	Gene ID= ENSG00000126945.8 TPM= 20.18 Transcript Type= protein_coding
chrX	101418299	101419183	101418299	101419183	+	ENST00000453574.1@ARMCX4	ENST00000453574.1	protein_coding	101418299,101418910	101418370,101419183	Gene ID= ENSG00000196440.11 TPM= 2.12 Transcript Type= processed_transcript
chrX	101485475	101533459	101485475	101533459	+	ENST00000354842.4@ARMCX4	ENST00000354842.4	protein_coding	101485475,101486023,101487193,101487608,101488044,101488444,101498145,101504937,101509364,101509590,101511025,101531644,101533084	101485530,101486092,101487272,101487691,101488099,101489315,101499366,101505355,101509427,101509678,101511055,101532012,101533459	Gene ID= ENSG00000196440.11 TPM= 1.06 Transcript Type= nonsense_mediated_decay
chrX	101550531	101554700	101550531	101554700	+	ENST00000372829.7@ARMCX1	ENST00000372829.7	protein_coding	101550531,101550971,101551569,101552809	101550660,101551024,101551633,101554700	Gene ID= ENSG00000126947.12 TPM= 92.41 Transcript Type= protein_coding
chrX	101615125	101617339	101615125	101617339	-	transcript1738.chrX.nic@ARMCX6	transcript1738.chrX.nic	protein_coding	101617292,101615125	101617339,101616766	Gene ID= ENSG00000198960.10 TPM= 3.72 Transcript Type= NA
chrX	101615120	101618001	101615120	101618001	-	ENST00000361910.8@ARMCX6	ENST00000361910.8	protein_coding	101617885,101617503,101615120	101618001,101617584,101616766	Gene ID= ENSG00000198960.10 TPM= 16.46 Transcript Type= protein_coding
chrX	101615118	101617910	101615118	101617910	-	ENST00000497931.5@ARMCX6	ENST00000497931.5	protein_coding	101617885,101617503,101616672,101615118	101617910,101617584,101616766,101615760	Gene ID= ENSG00000198960.10 TPM= 5.31 Transcript Type= processed_transcript
chrX	101623089	101626484	101623089	101626484	+	ENST00000471229.6@ARMCX3	ENST00000471229.6	protein_coding	101623089,101623814,101624158,101624480,101624834	101623276,101623893,101624218,101624550,101626484	Gene ID= ENSG00000102401.19 TPM= 87.1 Transcript Type= protein_coding
chrX	101622797	101627843	101622797	101627843	+	ENST00000341189.8@ARMCX3	ENST00000341189.8	protein_coding	101622797,101623786,101624158,101624480,101624834	101623276,101623893,101624218,101624550,101627843	Gene ID= ENSG00000102401.19 TPM= 43.55 Transcript Type= protein_coding
chrX	101623126	101626472	101623126	101626472	+	transcript1747.chrX.nnic@NA	transcript1747.chrX.nnic	NA	101623126	101626472	Gene ID= novel_gene_chrX_1748 TPM= 2.12 Transcript Type= NA
chrX	101634391	101635340	101634391	101635340	-	transcript1749.chrX.nnic@NA	transcript1749.chrX.nnic	NA	101634391	101635340	Gene ID= novel_gene_chrX_1750 TPM= 3.19 Transcript Type= NA
chrX	101655281	101659857	101655281	101659857	-	transcript1754.chrX.nnic@ARMCX2	transcript1754.chrX.nnic	protein_coding	101659758,101659431,101659076,101658461,101658073,101655281	101659857,101659501,101659148,101658525,101658142,101657715	Gene ID= ENSG00000184867.13 TPM= 4.43 Transcript Type= NA
chrX	101655281	101659857	101655281	101659857	-	transcript1759.chrX.nic@ARMCX2	transcript1759.chrX.nic	protein_coding	101659758,101659419,101659076,101658492,101658073,101655281	101659857,101659501,101659148,101658569,101658142,101657715	Gene ID= ENSG00000184867.13 TPM= 8.15 Transcript Type= NA
chrX	101655281	101659785	101655281	101659785	-	transcript1764.chrX.nic@ARMCX2	transcript1764.chrX.nic	protein_coding	101659758,101659076,101658492,101658073,101655281	101659785,101659148,101658569,101658142,101657715	Gene ID= ENSG00000184867.13 TPM= 3.9 Transcript Type= NA
chrX	101655281	101659198	101655281	101659198	-	transcript1766.chrX.nic@ARMCX2	transcript1766.chrX.nic	protein_coding	101659076,101658461,101658073,101655281	101659198,101658525,101658142,101657715	Gene ID= ENSG00000184867.13 TPM= 3.37 Transcript Type= NA
chrX	101655281	101659844	101655281	101659844	-	ENST00000328766.9@ARMCX2	ENST00000328766.9	protein_coding	101659758,101659076,101658461,101658073,101655281	101659844,101659136,101658569,101658142,101657715	Gene ID= ENSG00000184867.13 TPM= 4.43 Transcript Type= protein_coding
chrX	101655281	101658649	101655281	101658649	-	ENST00000330154.6@ARMCX2	ENST00000330154.6	protein_coding	101658492,101658073,101655281	101658649,101658142,101657715	Gene ID= ENSG00000184867.13 TPM= 5.49 Transcript Type= protein_coding
chrX	101655467	101659891	101655467	101659891	-	ENST00000356824.8@ARMCX2	ENST00000356824.8	protein_coding	101659758,101659419,101659076,101658461,101658073,101655467	101659891,101659501,101659148,101658525,101658142,101657715	Gene ID= ENSG00000184867.13 TPM= 3.19 Transcript Type= protein_coding
chrX	101883467	101932069	101883467	101932069	-	transcript1775.chrX.nnic@ZMAT1	transcript1775.chrX.nnic	protein_coding	101931717,101904224,101898119,101897868,101895814,101886632,101883467	101932069,101904330,101898220,101898042,101895882,101886731,101884821	Gene ID= ENSG00000166432.14 TPM= 2.12 Transcript Type= NA
chrX	102125688	102127711	102125688	102127711	+	ENST00000372780.5@TCEAL2	ENST00000372780.5	protein_coding	102125688,102126373,102126804	102125806,102126445,102127711	Gene ID= ENSG00000184905.8 TPM= 2.12 Transcript Type= protein_coding
chrX	102599505	102604159	102599505	102604159	+	transcript1779.chrX.nic@ARMCX5-GPRASP2	transcript1779.chrX.nic	processed_transcript	102599505,102599706,102600920,102601464,102601880	102599572,102599847,102601032,102601509,102604159	Gene ID= ENSG00000271147.7 TPM= 2.66 Transcript Type= NA
chrX	102599505	102604159	102599505	102604159	+	transcript1782.chrX.nic@ARMCX5-GPRASP2	transcript1782.chrX.nic	processed_transcript	102599505,102599706,102601464,102601880	102599572,102599847,102601509,102604159	Gene ID= ENSG00000271147.7 TPM= 3.72 Transcript Type= NA
chrX	102651366	102659083	102651366	102659083	+	ENST00000361600.9@GPRASP1	ENST00000361600.9	protein_coding	102651366,102652175,102652831,102653221,102653580	102651595,102652265,102652898,102653298,102659083	Gene ID= ENSG00000198932.12 TPM= 1.06 Transcript Type= protein_coding
chrX	102651366	102659080	102651366	102659080	+	ENST00000415986.5@GPRASP1	ENST00000415986.5	protein_coding	102651366,102652831,102653221,102653580	102651595,102652898,102653298,102659080	Gene ID= ENSG00000198932.12 TPM= 1.06 Transcript Type= protein_coding
chrX	102712845	102717733	102712845	102717733	+	transcript1793.chrX.nnic@ARMCX5-GPRASP2	transcript1793.chrX.nnic	processed_transcript	102712845,102713782,102714189,102714537	102713006,102713849,102714266,102717733	Gene ID= ENSG00000271147.7 TPM= 34.52 Transcript Type= NA
chrX	102712883	102717733	102712883	102717733	+	transcript1795.chrX.nnic@ARMCX5-GPRASP2	transcript1795.chrX.nnic	processed_transcript	102712883,102714189,102714537	102713217,102714266,102717733	Gene ID= ENSG00000271147.7 TPM= 4.78 Transcript Type= NA
chrX	102712877	102717733	102712877	102717733	+	transcript1792.chrX.nnic@GPRASP2	transcript1792.chrX.nnic	protein_coding	102712877,102713130,102713782,102714189,102714537	102713006,102713217,102713849,102714266,102717733	Gene ID= ENSG00000158301.18 TPM= 4.78 Transcript Type= NA
chrX	102712867	102717733	102712867	102717733	+	transcript1794.chrX.nic@GPRASP2	transcript1794.chrX.nic	protein_coding	102712867,102713782,102714189,102714537	102713217,102713849,102714266,102717733	Gene ID= ENSG00000158301.18 TPM= 7.97 Transcript Type= NA
chrX	102720701	102752438	102720701	102752438	+	transcript1797.chrX.nic@BHLHB9	transcript1797.chrX.nic	protein_coding	102720701,102720957,102747817,102748699	102720821,102721091,102747911,102752438	Gene ID= ENSG00000198908.11 TPM= 3.19 Transcript Type= NA
chrX	102720714	102752438	102720714	102752438	+	ENST00000457056.5@BHLHB9	ENST00000457056.5	protein_coding	102720714,102720957,102747817,102748699	102720825,102721091,102747911,102752438	Gene ID= ENSG00000198908.11 TPM= 2.12 Transcript Type= protein_coding
chrX	103062651	103064240	103062651	103064240	-	ENST00000372728.3@BEX1	ENST00000372728.3	protein_coding	103064096,103063642,103062651	103064240,103063731,103063279	Gene ID= ENSG00000133169.5 TPM= 2.12 Transcript Type= protein_coding
chrX	103215092	103217246	103215092	103217246	+	ENST00000372695.5@BEX4	ENST00000372695.5	protein_coding	103215092,103215682,103216149	103215238,103215764,103217246	Gene ID= ENSG00000102409.9 TPM= 18.06 Transcript Type= protein_coding
chrX	103252995	103255204	103252995	103255204	-	transcript1807.chrX.nnic@TCEAL8	transcript1807.chrX.nnic	protein_coding	103255078,103254605,103253707,103252995	103255204,103254677,103254017,103253512	Gene ID= ENSG00000180964.16 TPM= 3.54 Transcript Type= NA
chrX	103252995	103255203	103252995	103255203	-	ENST00000372685.7@TCEAL8	ENST00000372685.7	protein_coding	103255078,103254605,103252995	103255203,103254677,103254017	Gene ID= ENSG00000180964.16 TPM= 25.84 Transcript Type= protein_coding
chrX	103252995	103255185	103252995	103255185	-	ENST00000360000.8@TCEAL8	ENST00000360000.8	protein_coding	103255078,103252995	103255185,103254017	Gene ID= ENSG00000180964.16 TPM= 12.03 Transcript Type= protein_coding
chrX	103273691	103276872	103273691	103276872	-	ENST00000372680.1@TCEAL5	ENST00000372680.1	protein_coding	103276673,103275275,103273691	103276872,103275342,103274590	Gene ID= ENSG00000204065.2 TPM= 1.06 Transcript Type= protein_coding
chrX	103309346	103311046	103309346	103311046	-	ENST00000372677.7@BEX2	ENST00000372677.7	protein_coding	103310860,103310358,103309346	103311046,103310433,103309981	Gene ID= ENSG00000133134.11 TPM= 2.12 Transcript Type= protein_coding
chrX	103309354	103310955	103309354	103310955	-	ENST00000536889.1@BEX2	ENST00000536889.1	protein_coding	103310583,103310358,103309354	103310955,103310433,103309981	Gene ID= ENSG00000133134.11 TPM= 1.06 Transcript Type= protein_coding
chrX	103330196	103332326	103330196	103332326	+	ENST00000332431.4@TCEAL7	ENST00000332431.4	protein_coding	103330196,103330923,103331377	103330304,103331040,103332326	Gene ID= ENSG00000182916.7 TPM= 4.25 Transcript Type= protein_coding
chrX	103356452	103358451	103356452	103358451	+	ENST00000372661.4@TCEAL9	ENST00000372661.4	protein_coding	103356452,103357083,103357615	103356606,103357161,103358451	Gene ID= ENSG00000185222.8 TPM= 27.09 Transcript Type= protein_coding
chrX	103356452	103358451	103356452	103358451	+	ENST00000372656.4@TCEAL9	ENST00000372656.4	protein_coding	103356452,103357615	103356606,103358451	Gene ID= ENSG00000185222.8 TPM= 7.97 Transcript Type= protein_coding
chrX	103376340	103378077	103376340	103378077	+	ENST00000361298.8@BEX3	ENST00000361298.8	protein_coding	103376340,103377028,103377510	103376613,103377106,103378077	Gene ID= ENSG00000166681.13 TPM= 55.76 Transcript Type= protein_coding
chrX	103376395	103378077	103376395	103378077	+	ENST00000372645.3@BEX3	ENST00000372645.3	protein_coding	103376395,103377028,103377463	103376613,103377106,103378077	Gene ID= ENSG00000166681.13 TPM= 15.93 Transcript Type= protein_coding
chrX	103376916	103378071	103376916	103378071	+	ENST00000372634.1@BEX3	ENST00000372634.1	protein_coding	103376916,103377510	103377106,103378071	Gene ID= ENSG00000166681.13 TPM= 5.84 Transcript Type= protein_coding
chrX	103585492	103587518	103585492	103587518	+	ENST00000468024.5@TCEAL4	ENST00000468024.5	protein_coding	103585492,103586219,103586649	103585683,103586291,103587518	Gene ID= ENSG00000133142.17 TPM= 3.72 Transcript Type= protein_coding
chrX	103585563	103587526	103585563	103587526	+	ENST00000494801.5@TCEAL4	ENST00000494801.5	protein_coding	103585563,103586219,103586654	103585624,103586291,103587526	Gene ID= ENSG00000133142.17 TPM= 53.64 Transcript Type= protein_coding
chrX	103585533	103587694	103585533	103587694	+	ENST00000472745.1@TCEAL4	ENST00000472745.1	protein_coding	103585533,103585859,103586649	103585624,103586291,103587694	Gene ID= ENSG00000133142.17 TPM= 1.06 Transcript Type= protein_coding
chrX	103585515	103587502	103585515	103587502	+	ENST00000415568.2@TCEAL4	ENST00000415568.2	protein_coding	103585515,103586654	103585624,103587502	Gene ID= ENSG00000133142.17 TPM= 1.06 Transcript Type= protein_coding
chrX	103585517	103587725	103585517	103587725	+	ENST00000613326.4@TCEAL4	ENST00000613326.4	protein_coding	103585517,103586219,103586654,103586949	103585624,103586291,103586861,103587725	Gene ID= ENSG00000133142.17 TPM= 5.31 Transcript Type= protein_coding
chrX	103607906	103609926	103607906	103609926	+	ENST00000243286.7@TCEAL3	ENST00000243286.7	protein_coding	103607906,103608604,103609038	103608070,103608673,103609926	Gene ID= ENSG00000196507.10 TPM= 14.34 Transcript Type= protein_coding
chrX	103607906	103609927	103607906	103609927	+	ENST00000372627.9@TCEAL3	ENST00000372627.9	protein_coding	103607906,103608604,103609038	103608058,103608673,103609927	Gene ID= ENSG00000196507.10 TPM= 44.08 Transcript Type= protein_coding
chrX	103629698	103630953	103629698	103630953	+	transcript1845.chrX.nnic@TCEAL1	transcript1845.chrX.nnic	protein_coding	103629698,103629885	103629803,103630953	Gene ID= ENSG00000172465.13 TPM= 14.52 Transcript Type= NA
chrX	103628999	103630953	103628999	103630953	+	ENST00000372624.3@TCEAL1	ENST00000372624.3	protein_coding	103628999,103629494,103629885	103629025,103629561,103630953	Gene ID= ENSG00000172465.13 TPM= 4.96 Transcript Type= protein_coding
chrX	103628974	103630953	103628974	103630953	+	ENST00000372625.7@TCEAL1	ENST00000372625.7	protein_coding	103628974,103629494,103629885	103629025,103629573,103630953	Gene ID= ENSG00000172465.13 TPM= 2.84 Transcript Type= protein_coding
chrX	103675496	103686705	103675496	103686705	-	transcript1847.chrX.nic@MORF4L2	transcript1847.chrX.nic	protein_coding	103686631,103685171,103684681,103678499,103675496	103686705,103685260,103684729,103678600,103677051	Gene ID= ENSG00000123562.16 TPM= 12.43 Transcript Type= NA
chrX	103675496	103688044	103675496	103688044	-	transcript1854.chrX.nnic@MORF4L2	transcript1854.chrX.nnic	protein_coding	103687989,103685171,103678499,103675496	103688044,103685260,103678620,103677051	Gene ID= ENSG00000123562.16 TPM= 7.12 Transcript Type= NA
chrX	103675500	103688158	103675500	103688158	-	ENST00000433176.6@MORF4L2	ENST00000433176.6	protein_coding	103687989,103685171,103678499,103675500	103688158,103685260,103678651,103677051	Gene ID= ENSG00000123562.16 TPM= 12.43 Transcript Type= protein_coding
chrX	103675505	103686705	103675505	103686705	-	transcript1859.chrX.nnic@MORF4L2	transcript1859.chrX.nnic	protein_coding	103686631,103685171,103678499,103675505	103686705,103685260,103678600,103677033	Gene ID= ENSG00000123562.16 TPM= 5.52 Transcript Type= NA
chrX	103676134	103679885	103676134	103679885	-	transcript1863.chrX.nic@MORF4L2	transcript1863.chrX.nic	protein_coding	103678499,103676134	103679885,103677051	Gene ID= ENSG00000123562.16 TPM= 11.68 Transcript Type= NA
chrX	103675496	103688064	103675496	103688064	-	ENST00000360458.5@MORF4L2	ENST00000360458.5	protein_coding	103687989,103685171,103678499,103675496	103688064,103685260,103678600,103677051	Gene ID= ENSG00000123562.16 TPM= 49.6 Transcript Type= protein_coding
chrX	103822322	103832228	103822322	103832228	-	ENST00000243298.2@RAB9B	ENST00000243298.2	protein_coding	103832060,103827005,103822322	103832228,103827078,103825826	Gene ID= ENSG00000123570.3 TPM= 33.99 Transcript Type= protein_coding
chrX	104102463	104112501	104102463	104112501	-	transcript1875.chrX.nnic@SLC25A53	transcript1875.chrX.nnic	protein_coding	104112316,104111308,104102463	104112501,104111473,104105288	Gene ID= ENSG00000269743.2 TPM= 2.12 Transcript Type= NA
chrX	104112526	104115846	104112526	104115846	+	ENST00000611638.4@ZCCHC18	ENST00000611638.4	protein_coding	104112526,104113195,104113434	104113001,104113246,104115846	Gene ID= ENSG00000166707.10 TPM= 3.19 Transcript Type= protein_coding
chrX	104119535	104122546	104119535	104122546	-	transcript1886.chrX.nnic@NA	transcript1886.chrX.nnic	NA	104119535	104122546	Gene ID= novel_gene_chrX_1887 TPM= 2.12 Transcript Type= NA
chrX	106168305	106208956	106168305	106208956	+	ENST00000357175.6@MUM1L1	ENST00000357175.6	protein_coding	106168305,106171012,106203985,106205219	106168425,106171139,106204170,106208956	Gene ID= ENSG00000157502.13 TPM= 7.44 Transcript Type= protein_coding
chrX	106802680	106876145	106802680	106876145	+	ENST00000357242.9@TBC1D8B	ENST00000357242.9	protein_coding	106802680,106818663,106820877,106821977,106823226,106826030,106827170,106839308,106840048,106840670,106848186,106850025,106853521,106854198,106865559,106865793,106866797,106868393,106869485,106870716,106873570	106802983,106818773,106820995,106822202,106823466,106826237,106827337,106839457,106840198,106840884,106848303,106850310,106853650,106854296,106865627,106866033,106866862,106868476,106869541,106870813,106876145	Gene ID= ENSG00000133138.19 TPM= 2.12 Transcript Type= protein_coding
chrX	107063953	107118828	107063953	107118828	-	transcript1902.chrX.nic@RBM41	transcript1902.chrX.nic	protein_coding	107118766,107116650,107115862,107115352,107113397,107088436,107069255,107067556,107063953	107118828,107116766,107116054,107115556,107113468,107088839,107069402,107067693,107065758	Gene ID= ENSG00000089682.16 TPM= 4.25 Transcript Type= NA
chrX	107066300	107118828	107066300	107118828	-	transcript1906.chrX.nic@RBM41	transcript1906.chrX.nic	protein_coding	107118766,107116650,107115862,107115352,107113397,107088436,107069255,107066300	107118828,107116766,107116054,107115556,107113468,107088839,107069402,107067693	Gene ID= ENSG00000089682.16 TPM= 2.12 Transcript Type= NA
chrX	107123472	107206456	107123472	107206456	-	transcript1909.chrX.nic@NUP62CL	transcript1909.chrX.nic	protein_coding	107206273,107175089,107167649,107154096,107153454,107153172,107147743,107123472	107206456,107175193,107167784,107154246,107153503,107153306,107147809,107124332	Gene ID= ENSG00000198088.10 TPM= 3.19 Transcript Type= NA
chrX	107628507	107651026	107628507	107651026	+	ENST00000372435.8@PRPS1	ENST00000372435.8	protein_coding	107628507,107639295,107640902,107642366,107645177,107647606,107649940	107628750,107639478,107641000,107642490,107645350,107647765,107651026	Gene ID= ENSG00000147224.10 TPM= 11.68 Transcript Type= protein_coding
chrX	107713221	107775985	107713221	107775985	-	ENST00000315660.8@TSC22D3	ENST00000315660.8	protein_coding	107775780,107775100,107715899,107713221	107775985,107775525,107715950,107714749	Gene ID= ENSG00000157514.16 TPM= 5.58 Transcript Type= protein_coding
chrX	107713221	107716545	107713221	107716545	-	ENST00000372390.8@TSC22D3	ENST00000372390.8	protein_coding	107716315,107715899,107713221	107716545,107715950,107714749	Gene ID= ENSG00000157514.16 TPM= 1.86 Transcript Type= protein_coding
chrX	107713221	107717135	107713221	107717135	-	ENST00000372397.6@TSC22D3	ENST00000372397.6	protein_coding	107716690,107715899,107713221	107717135,107715950,107714749	Gene ID= ENSG00000157514.16 TPM= 35.85 Transcript Type= protein_coding
chrX	107713224	107775787	107713224	107775787	-	ENST00000372383.8@TSC22D3	ENST00000372383.8	protein_coding	107775100,107715899,107713224	107775787,107715950,107714749	Gene ID= ENSG00000157514.16 TPM= 19.38 Transcript Type= protein_coding
chrX	108084207	108091618	108084207	108091618	-	ENST00000217958.7@PSMD10	ENST00000217958.7	protein_coding	108091407,108088752,108087953,108087686,108084207	108091618,108088850,108088099,108087852,108085127	Gene ID= ENSG00000101843.18 TPM= 23.37 Transcript Type= protein_coding
chrX	108091668	108154671	108091668	108154671	+	ENST00000372232.7@ATG4A	ENST00000372232.7	protein_coding	108091668,108126077,108128781,108131260,108134057,108134339,108137091,108137804,108138113,108150152,108151802,108152979,108153642	108091836,108126187,108128852,108131358,108134158,108134411,108137170,108137991,108138191,108150297,108151858,108153087,108154671	Gene ID= ENSG00000101844.17 TPM= 25.49 Transcript Type= protein_coding
chrX	108439882	108697545	108439882	108697545	+	ENST00000361603.6@COL4A5	ENST00000361603.6	protein_coding	108439882,108539746,108559064,108563882,108568629,108568759,108571413,108571811,108573574,108575910,108577952,108578078,108578291,108580533,108580682,108580983,108582884,108584484,108586615,108591058,108591561,108595509,108596998,108597377,108598702,108601393,108601885,108602964,108606742,108614911,108620259,108621803,108622676,108624236,108625705,108626210,108655331,108665507,108666496,108667133,108668319,108677500,108680679,108680885,108681760,108686031,108687482,108692748,108694807,108695267,108696297	108440206,108539805,108559153,108563926,108568673,108568821,108571466,108571837,108573654,108575972,108577987,108578119,108578383,108580586,108580738,108581027,108582937,108584525,108586747,108591231,108591644,108595601,108597068,108597568,108598870,108601485,108601989,108603061,108606892,108615024,108620426,108621892,108622825,108624334,108625794,108626349,108655457,108665587,108666594,108667183,108668504,108677633,108680751,108680956,108681888,108686129,108687694,108692925,108694921,108695439,108697545	Gene ID= ENSG00000188153.12 TPM= 4.25 Transcript Type= protein_coding
chrX	109623700	109625172	109623700	109625172	-	ENST00000372101.3@KCNE5	ENST00000372101.3	protein_coding	109623700	109625172	Gene ID= ENSG00000176076.7 TPM= 1.06 Transcript Type= protein_coding
chrX	109628860	109733254	109628860	109733254	-	transcript1939.chrX.nnic@ACSL4	transcript1939.chrX.nnic	protein_coding	109733139,109696144,109683136,109682719,109681266,109680998,109678265,109677988,109674402,109669034,109668101,109665420,109663211,109661531,109659354,109628860	109733254,109696196,109683375,109682896,109681375,109681136,109678415,109678111,109674473,109669173,109668273,109665494,109663402,109661645,109659511,109629579	Gene ID= ENSG00000068366.19 TPM= 3.19 Transcript Type= NA
chrX	109641337	109733403	109641337	109733403	-	ENST00000348502.10@ACSL4	ENST00000348502.10	protein_coding	109733139,109696144,109683136,109682719,109681266,109680998,109678265,109677988,109674402,109669034,109668101,109665420,109663211,109661531,109659354,109641337	109733403,109696196,109683372,109682896,109681375,109681136,109678415,109678111,109674473,109669173,109668273,109665494,109663402,109661645,109659511,109644186	Gene ID= ENSG00000068366.19 TPM= 40.89 Transcript Type= protein_coding
chrX	109641337	109733296	109641337	109733296	-	transcript1944.chrX.nnic@ACSL4	transcript1944.chrX.nnic	protein_coding	109733139,109683136,109682719,109681266,109680998,109678265,109677988,109674402,109669034,109668101,109665420,109663211,109661531,109659354,109641337	109733296,109683375,109682896,109681375,109681136,109678415,109678111,109674473,109669173,109668273,109665494,109663402,109661645,109659511,109644186	Gene ID= ENSG00000068366.19 TPM= 4.78 Transcript Type= NA
chrX	110030762	110031785	110030762	110031785	-	transcript1954.chrX.nnic@NA	transcript1954.chrX.nnic	NA	110030762	110031785	Gene ID= novel_gene_chrX_1955 TPM= 2.12 Transcript Type= NA
chrX	110174595	110177659	110174595	110177659	+	transcript1950.chrX.nnic@NA	transcript1950.chrX.nnic	NA	110174595	110177659	Gene ID= novel_gene_chrX_1951 TPM= 6.37 Transcript Type= NA
chrX	110194186	110318239	110194186	110318239	-	ENST00000262844.9@AMMECR1	ENST00000262844.9	protein_coding	110317599,110264489,110216518,110202446,110200954,110194186	110318239,110264599,110216632,110202536,110201050,110198634	Gene ID= ENSG00000101935.9 TPM= 6.37 Transcript Type= protein_coding
chrX	111681170	111688795	111681170	111688795	+	transcript1958.chrX.nic@ALG13	transcript1958.chrX.nic	protein_coding	111681170,111682236,111684965,111687887	111681299,111682294,111685103,111688795	Gene ID= ENSG00000101901.11 TPM= 2.12 Transcript Type= NA
chrX	111681118	111690172	111681118	111690172	+	ENST00000371979.7@ALG13	ENST00000371979.7	protein_coding	111681118,111682132,111684965,111687887	111681299,111682294,111685103,111690172	Gene ID= ENSG00000101901.11 TPM= 3.19 Transcript Type= protein_coding
chrX	111693166	111695347	111693166	111695347	-	transcript1960.chrX.nnic@NA	transcript1960.chrX.nnic	NA	111693166	111695347	Gene ID= novel_gene_chrX_1961 TPM= 4.25 Transcript Type= NA
chrX	111700753	111705902	111700753	111705902	-	transcript1964.chrX.nnic@NA	transcript1964.chrX.nnic	NA	111700753	111705902	Gene ID= novel_gene_chrX_1965 TPM= 6.37 Transcript Type= NA
chrX	111706061	111708241	111706061	111708241	-	transcript1962.chrX.nnic@NA	transcript1962.chrX.nnic	NA	111706061	111708241	Gene ID= novel_gene_chrX_1963 TPM= 2.12 Transcript Type= NA
chrX	115561197	115650672	115561197	115650672	+	transcript1968.chrX.nnic@PLS3	transcript1968.chrX.nnic	protein_coding	115561197,115610243,115622246,115624341,115629198,115629835,115634000,115634881,115636836,115640408,115643313,115645021,115646072,115646402,115647550,115647893,115649429	115561260,115610323,115622409,115624380,115629327,115629967,115634081,115635046,115636978,115640503,115643508,115645099,115646186,115646535,115647673,115648017,115650672	Gene ID= ENSG00000102024.17 TPM= 2.12 Transcript Type= NA
chrX	115561144	115650672	115561144	115650672	+	transcript1969.chrX.nnic@PLS3	transcript1969.chrX.nnic	protein_coding	115561144,115610243,115622246,115624341,115629198,115634000,115634881,115636836,115640408,115643313,115645021,115646072,115646402,115647550,115647893,115649429	115561260,115610323,115622409,115624380,115629327,115634081,115635046,115636978,115640503,115643508,115645099,115646186,115646535,115647673,115648017,115650672	Gene ID= ENSG00000102024.17 TPM= 2.12 Transcript Type= NA
chrX	115561196	115650672	115561196	115650672	+	transcript1970.chrX.nic@PLS3	transcript1970.chrX.nic	protein_coding	115561196,115610243,115622246,115624341,115629835,115634000,115634881,115636836,115640408,115643313,115645021,115646072,115646402,115647550,115647893,115649429	115561260,115610323,115622409,115624380,115629967,115634081,115635046,115636978,115640503,115643508,115645099,115646186,115646535,115647673,115648017,115650672	Gene ID= ENSG00000102024.17 TPM= 4.25 Transcript Type= NA
chrX	115561182	115650861	115561182	115650861	+	ENST00000355899.7@PLS3	ENST00000355899.7	protein_coding	115561182,115610243,115622246,115629198,115629835,115634000,115634881,115636836,115640408,115643313,115645021,115646072,115646402,115647550,115647893,115649429	115561260,115610323,115622409,115629327,115629967,115634081,115635046,115636978,115640503,115643508,115645099,115646186,115646535,115647673,115648017,115650861	Gene ID= ENSG00000102024.17 TPM= 1.06 Transcript Type= protein_coding
chrX	115593608	115650672	115593608	115650672	+	ENST00000539310.5@PLS3	ENST00000539310.5	protein_coding	115593608,115610243,115622246,115629198,115629835,115634000,115634881,115636836,115640408,115643313,115645021,115646072,115646402,115647550,115647893,115649429	115593632,115610323,115622409,115629327,115629967,115634081,115635046,115636978,115640503,115643508,115645099,115646186,115646535,115647673,115648017,115650672	Gene ID= ENSG00000102024.17 TPM= 10.62 Transcript Type= protein_coding
chrX	115908752	115911425	115908752	115911425	+	transcript1984.chrX.nnic@NA	transcript1984.chrX.nnic	NA	115908752	115911425	Gene ID= novel_gene_chrX_1985 TPM= 6.37 Transcript Type= NA
chrX	115932256	115936746	115932256	115936746	-	transcript1986.chrX.nnic@NA	transcript1986.chrX.nnic	NA	115932256	115936746	Gene ID= novel_gene_chrX_1987 TPM= 2.12 Transcript Type= NA
chrX	115968115	115969141	115968115	115969141	-	transcript1988.chrX.nnic@NA	transcript1988.chrX.nnic	NA	115968115	115969141	Gene ID= novel_gene_chrX_1989 TPM= 2.12 Transcript Type= NA
chrX	117897813	118116794	117897813	118116794	-	transcript1991.chrX.nnic@KLHL13	transcript1991.chrX.nnic	protein_coding	118116508,118028936,118028424,117945434,117920238,117919521,117909301,117901833,117897813	118116794,118029098,118028497,117945575,117920370,117919717,117910096,117901946,117899395	Gene ID= ENSG00000003096.14 TPM= 3.19 Transcript Type= NA
chrX	117897814	118116865	117897814	118116865	-	ENST00000540167.5@KLHL13	ENST00000540167.5	protein_coding	118116508,118028424,117945434,117920238,117919521,117909301,117901833,117897814	118116865,118028497,117945575,117920370,117919717,117910096,117901946,117899395	Gene ID= ENSG00000003096.14 TPM= 4.25 Transcript Type= protein_coding
chrX	117897814	118116865	117897814	118116865	-	ENST00000545703.5@KLHL13	ENST00000545703.5	protein_coding	118116508,117945434,117920238,117919521,117909301,117901833,117897814	118116865,117945575,117920370,117919717,117910096,117901946,117899395	Gene ID= ENSG00000003096.14 TPM= 8.5 Transcript Type= protein_coding
chrX	118346089	118449937	118346089	118449937	+	transcript2002.chrX.nic@WDR44	transcript2002.chrX.nic	protein_coding	118346089,118378419,118392632,118394055,118395249,118396970,118398387,118404338,118406875,118409489,118410895,118432781,118436702,118441368,118442244,118442565,118443560,118444360,118448893	118346580,118378452,118393271,118394185,118395344,118397106,118398470,118404444,118407026,118409627,118410959,118432894,118436824,118441559,118442345,118442680,118443687,118444494,118449937	Gene ID= ENSG00000131725.13 TPM= 3.19 Transcript Type= NA
chrX	118346109	118449961	118346109	118449961	+	ENST00000254029.7@WDR44	ENST00000254029.7	protein_coding	118346109,118378419,118387340,118392632,118394055,118395249,118396970,118398387,118404338,118406875,118409489,118410895,118432781,118436702,118441368,118442244,118442565,118443560,118444360,118448893	118346580,118378452,118387414,118393271,118394185,118395344,118397106,118398470,118404444,118407026,118409627,118410959,118432894,118436824,118441559,118442345,118442680,118443687,118444494,118449961	Gene ID= ENSG00000131725.13 TPM= 9.56 Transcript Type= protein_coding
chrX	118727572	118794539	118727572	118794539	+	ENST00000371666.7@IL13RA1	ENST00000371666.7	protein_coding	118727572,118741017,118746954,118749658,118758055,118761138,118766530,118766844,118773879,118776427,118791762	118727726,118741156,118747092,118749778,118758242,118761289,118766577,118766976,118773975,118776511,118794539	Gene ID= ENSG00000131724.10 TPM= 10.62 Transcript Type= protein_coding
chrX	118823790	118826968	118823790	118826968	+	ENST00000310164.2@ZCCHC12	ENST00000310164.2	protein_coding	118823790,118824339,118824589,118825131	118824005,118824390,118824713,118826968	Gene ID= ENSG00000174460.3 TPM= 1.06 Transcript Type= protein_coding
chrX	118974618	119017983	118974618	119017983	+	ENST00000481285.5@LONRF3	ENST00000481285.5	protein_coding	118974618,118978345,118982821,118989408,118990470,119006121,119009126,119011815,119012880,119014207,119017535	118975597,118978463,118982943,118989672,118990560,119006235,119009247,119011973,119013201,119014356,119017983	Gene ID= ENSG00000175556.16 TPM= 1.06 Transcript Type= nonsense_mediated_decay
chrX	119236253	119244466	119236253	119244466	+	ENST00000217971.7@PGRMC1	ENST00000217971.7	protein_coding	119236253,119240309,119243151	119236691,119240464,119244466	Gene ID= ENSG00000101856.9 TPM= 25.49 Transcript Type= protein_coding
chrX	119399060	119454478	119399060	119454478	+	ENST00000217909.7@SLC25A43	ENST00000217909.7	protein_coding	119399060,119406460,119410190,119452009,119452865	119399678,119406701,119410362,119452143,119454478	Gene ID= ENSG00000077713.18 TPM= 7.44 Transcript Type= protein_coding
chrX	119466034	119468262	119466034	119468262	-	ENST00000446986.1@SLC25A5-AS1	ENST00000446986.1	processed_transcript	119468106,119466034	119468262,119467750	Gene ID= ENSG00000224281.4 TPM= 2.12 Transcript Type= lincRNA
chrX	119466034	119469095	119466034	119469095	-	ENST00000395539.2@SLC25A5-AS1	ENST00000395539.2	processed_transcript	119466034	119469095	Gene ID= ENSG00000224281.4 TPM= 1.06 Transcript Type= retained_intron
chrX	119468400	119471319	119468400	119471319	+	ENST00000317881.8@SLC25A5	ENST00000317881.8	protein_coding	119468400,119469661,119470373,119470901	119468626,119470147,119470513,119471319	Gene ID= ENSG00000005022.5 TPM= 452.48 Transcript Type= protein_coding
chrX	119574536	119583347	119574536	119583347	+	ENST00000346330.6@UBE2A	ENST00000346330.6	protein_coding	119574536,119574901,119575375,119581507,119582597,119583127	119574755,119574981,119575400,119581596,119582676,119583347	Gene ID= ENSG00000077721.15 TPM= 14.87 Transcript Type= protein_coding
chrX	119574563	119584425	119574563	119584425	+	ENST00000630695.2@UBE2A	ENST00000630695.2	protein_coding	119574563,119574908,119575375,119581507,119582588,119583127	119574755,119574981,119575400,119581596,119582676,119584425	Gene ID= ENSG00000077721.15 TPM= 13.81 Transcript Type= protein_coding
chrX	119616945	119693370	119616945	119693370	-	ENST00000354416.7@SEPT6	ENST00000354416.7	protein_coding	119693076,119675554,119663482,119652854,119649937,119640692,119637027,119633360,119629318,119616945	119693370,119675668,119663677,119653040,119650098,119640788,119637195,119633492,119629508,119620051	Gene ID= ENSG00000125354.22 TPM= 2.12 Transcript Type= protein_coding
chrX	119786506	119791643	119786506	119791643	-	ENST00000361575.3@RPL39	ENST00000361575.3	protein_coding	119791574,119789908,119786506	119791643,119790011,119786732	Gene ID= ENSG00000198918.7 TPM= 181.63 Transcript Type= protein_coding
chrX	119841153	119853005	119841153	119853005	-	transcript2048.chrX.nic@UPF3B	transcript2048.chrX.nic	protein_coding	119852773,119851767,119851495,119845198,119843191,119841735,119841153	119853005,119851873,119851601,119845296,119843301,119841778,119841258	Gene ID= ENSG00000125351.11 TPM= 3.72 Transcript Type= NA
chrX	119834026	119852998	119834026	119852998	-	ENST00000345865.6@UPF3B	ENST00000345865.6	protein_coding	119852773,119851767,119851495,119845198,119843191,119841735,119841076,119838367,119837757,119834026	119852998,119851873,119851601,119845296,119843301,119841778,119841258,119838527,119838051,119835027	Gene ID= ENSG00000125351.11 TPM= 1.59 Transcript Type= protein_coding
chrX	119870475	119871827	119870475	119871827	-	ENST00000371442.3@RNF113A	ENST00000371442.3	protein_coding	119870475	119871827	Gene ID= ENSG00000125352.5 TPM= 2.12 Transcript Type= protein_coding
chrX	119871487	119876662	119871487	119876662	+	ENST00000371437.4@NDUFA1	ENST00000371437.4	protein_coding	119871487,119873304,119876514	119872013,119873393,119876662	Gene ID= ENSG00000125356.6 TPM= 1062.16 Transcript Type= protein_coding
chrX	119934526	119943784	119934526	119943784	-	transcript2055.chrX.nic@NKAP	transcript2055.chrX.nic	protein_coding	119943220,119938730,119936612,119936297,119934526	119943784,119938810,119936682,119936431,119934557	Gene ID= ENSG00000101882.9 TPM= 4.25 Transcript Type= NA
chrX	120250752	120258398	120250752	120258398	+	ENST00000326624.2@ZBTB33	ENST00000326624.2	protein_coding	120250752,120253414	120250977,120258398	Gene ID= ENSG00000177485.6 TPM= 2.12 Transcript Type= protein_coding
chrX	120362112	120382371	120362112	120382371	+	ENST00000218008.7@ATP1B4	ENST00000218008.7	protein_coding	120362112,120366525,120370715,120371106,120375372,120376380,120378678,120379473	120362231,120366789,120370843,120371210,120375568,120376436,120378773,120382371	Gene ID= ENSG00000101892.11 TPM= 3.19 Transcript Type= protein_coding
chrX	120427827	120469365	120427827	120469365	-	ENST00000434600.6@LAMP2	ENST00000434600.6	protein_coding	120469106,120456651,120455357,120448970,120447841,120446305,120442599,120441730,120427827	120469365,120456769,120455570,120449128,120448025,120446427,120442662,120441894,120428626	Gene ID= ENSG00000005893.15 TPM= 1.41 Transcript Type= protein_coding
chrX	120430826	120469306	120430826	120469306	-	ENST00000200639.8@LAMP2	ENST00000200639.8	protein_coding	120469106,120456651,120455357,120448970,120447841,120446305,120442599,120441730,120430826	120469306,120456769,120455570,120449128,120448025,120446427,120442662,120441894,120431462	Gene ID= ENSG00000005893.15 TPM= 6.72 Transcript Type= protein_coding
chrX	120436494	120469306	120436494	120469306	-	ENST00000371335.4@LAMP2	ENST00000371335.4	protein_coding	120469106,120456651,120455357,120448970,120447841,120446305,120442599,120441730,120436494	120469306,120456769,120455570,120449128,120448025,120446427,120442662,120441894,120439293	Gene ID= ENSG00000005893.15 TPM= 90.63 Transcript Type= protein_coding
chrX	120432196	120432942	120432196	120432942	+	transcript2080.chrX.nnic@NA	transcript2080.chrX.nnic	NA	120432196	120432942	Gene ID= novel_gene_chrX_2081 TPM= 5.31 Transcript Type= NA
chrX	120524609	120560700	120524609	120560700	-	ENST00000371322.9@CUL4B	ENST00000371322.9	protein_coding	120560083,120557924,120547136,120546547,120545444,120544481,120544114,120543727,120542966,120541602,120540370,120539268,120538660,120538124,120536927,120535830,120534481,120532422,120530102,120524609	120560700,120558039,120547239,120546616,120545517,120544643,120544203,120543809,120543033,120541720,120540562,120539372,120538770,120538209,120537034,120535943,120534586,120532594,120530254,120526856	Gene ID= ENSG00000158290.16 TPM= 5.31 Transcript Type= protein_coding
chrX	120603980	120612479	120603980	120612479	+	ENST00000371317.9@MCTS1	ENST00000371317.9	protein_coding	120603980,120605407,120606079,120608225,120611011,120612183	120604247,120605559,120606176,120608358,120611078,120612479	Gene ID= ENSG00000232119.7 TPM= 16.99 Transcript Type= protein_coding
chrX	120625793	120630150	120625793	120630150	-	ENST00000304661.5@C1GALT1C1	ENST00000304661.5	protein_coding	120629917,120625793	120630150,120627171	Gene ID= ENSG00000171155.7 TPM= 8.5 Transcript Type= protein_coding
chrX	122421947	122478043	122421947	122478043	+	transcript2106.chrX.nnic@NA	transcript2106.chrX.nnic	NA	122421947,122477002	122422061,122478043	Gene ID= novel_gene_chrX_2107 TPM= 3.19 Transcript Type= NA
chrX	122421947	122478493	122421947	122478493	+	transcript2108.chrX.nnic@NA	transcript2108.chrX.nnic	NA	122421947,122477002	122422061,122478493	Gene ID= novel_gene_chrX_2109 TPM= 5.31 Transcript Type= NA
chrX	122422006	122478493	122422006	122478493	+	transcript2102.chrX.nnic@NA	transcript2102.chrX.nnic	NA	122422006,122459142,122477002	122422061,122459270,122478493	Gene ID= novel_gene_chrX_2103 TPM= 7.44 Transcript Type= NA
chrX	123184313	123418450	123184313	123418450	+	transcript2114.chrX.nic@GRIA3	transcript2114.chrX.nic	protein_coding	123184313,123185832,123253303,123326026,123354910,123394968,123398636,123402994,123403412,123404708,123417402	123184644,123185990,123253542,123326213,123354963,123395129,123398803,123403098,123403519,123404914,123418450	Gene ID= ENSG00000125675.17 TPM= 3.19 Transcript Type= NA
chrX	123184299	123204683	123184299	123204683	+	ENST00000611689.4@GRIA3	ENST00000611689.4	protein_coding	123184299,123185832,123202636,123204400	123184644,123185990,123202782,123204683	Gene ID= ENSG00000125675.17 TPM= 1.06 Transcript Type= protein_coding
chrX	123421093	123421306	123421093	123421306	+	transcript2120.chrX.nnic@NA	transcript2120.chrX.nnic	NA	123421093	123421306	Gene ID= novel_gene_chrX_2121 TPM= 2.12 Transcript Type= NA
chrX	123621395	123733075	123621395	123733075	-	transcript2124.chrX.nic@THOC2	transcript2124.chrX.nic	protein_coding	123732952,123712850,123706858,123703454,123697681,123696721,123696021,123686548,123671669,123668159,123667106,123665642,123645334,123644779,123644575,123640538,123638934,123638043,123636079,123633953,123632861,123631688,123627693,123626521,123625912,123624541,123624060,123623787,123623105,123622758,123621395	123733075,123712908,123706949,123703505,123697751,123696842,123696154,123686714,123671761,123668314,123667278,123665837,123645375,123644909,123644676,123640622,123639027,123638123,123636175,123634070,123633040,123631852,123627968,123626662,123626069,123624669,123624191,123623971,123623283,123622860,123621587	Gene ID= ENSG00000125676.19 TPM= 7.44 Transcript Type= NA
chrX	123908819	123912226	123908819	123912226	+	transcript2144.chrX.nnic@NA	transcript2144.chrX.nnic	NA	123908819	123912226	Gene ID= novel_gene_chrX_2145 TPM= 6.37 Transcript Type= NA
chrX	123961331	124100902	123961331	124100902	+	transcript2148.chrX.nic@STAG2	transcript2148.chrX.nic	protein_coding	123961331,124021367,124022531,124025840,124030961,124037527,124042569,124045164,124047354,124049005,124050186,124051121,124051315,124056128,124057866,124061224,124061771,124062902,124063116,124063848,124065876,124066175,124066356,124068564,124071149,124076332,124077957,124081380,124083421,124086547,124090575,124094018,124095372,124100574	123961435,124021431,124022671,124025918,124031125,124037623,124042645,124045368,124047505,124049078,124050309,124051219,124051394,124056235,124057977,124061341,124061874,124062994,124063205,124064051,124065946,124066262,124066436,124068656,124071323,124076471,124078058,124081528,124083549,124086770,124090764,124094144,124095449,124100902	Gene ID= ENSG00000101972.18 TPM= 3.72 Transcript Type= NA
chrX	123961710	124100902	123961710	124100902	+	transcript2149.chrX.nic@STAG2	transcript2149.chrX.nic	protein_coding	123961710,124022531,124025840,124030961,124037527,124042569,124045164,124047354,124049005,124050186,124051121,124051315,124056128,124057866,124061224,124061771,124062902,124063116,124063848,124065876,124066175,124066356,124068564,124071149,124076332,124077957,124081380,124083421,124086547,124090575,124090854,124094018,124095372,124100574	123961856,124022671,124025918,124031125,124037623,124042645,124045368,124047505,124049078,124050309,124051219,124051394,124056235,124057977,124061341,124061874,124062994,124063205,124064051,124065946,124066262,124066436,124068656,124071323,124076471,124078058,124081528,124083549,124086770,124090764,124090964,124094144,124095449,124100902	Gene ID= ENSG00000101972.18 TPM= 4.25 Transcript Type= NA
chrX	123960527	124100902	123960527	124100902	+	transcript2150.chrX.nic@STAG2	transcript2150.chrX.nic	protein_coding	123960527,124022531,124025840,124030961,124037527,124042569,124045164,124047354,124049005,124050186,124051121,124051315,124056128,124057866,124061224,124061771,124062902,124063116,124063848,124065876,124066175,124066356,124068564,124071149,124076332,124077957,124081380,124083421,124086547,124090575,124094018,124095372,124100574	123960866,124022671,124025918,124031125,124037623,124042645,124045368,124047505,124049078,124050309,124051219,124051394,124056235,124057977,124061341,124061874,124062994,124063205,124064051,124065946,124066262,124066436,124068656,124071323,124076471,124078058,124081528,124083549,124086770,124090764,124094144,124095449,124100902	Gene ID= ENSG00000101972.18 TPM= 3.72 Transcript Type= NA
chrX	123960519	124101498	123960519	124101498	+	ENST00000218089.13@STAG2	ENST00000218089.13	protein_coding	123960519,124021367,124022531,124025840,124030961,124037527,124042569,124045164,124047354,124049005,124050186,124051121,124051315,124056128,124057866,124061224,124061771,124062902,124063116,124063848,124065876,124066175,124066356,124068564,124071149,124076332,124077957,124081380,124083421,124086547,124090575,124090854,124094018,124095372,124100574	123960866,124021431,124022671,124025918,124031125,124037623,124042645,124045368,124047505,124049078,124050309,124051219,124051394,124056235,124057977,124061341,124061874,124062994,124063205,124064051,124065946,124066262,124066436,124068656,124071323,124076471,124078058,124081528,124083549,124086770,124090764,124090964,124094144,124095449,124101498	Gene ID= ENSG00000101972.18 TPM= 1.06 Transcript Type= protein_coding
chrX	129446756	129523509	129446756	129523509	-	transcript2172.chrX.nnic@SMARCA1	transcript2172.chrX.nnic	protein_coding	129523197,129518361,129516331,129515894,129515687,129511804,129507941,129506080,129504734,129499732,129497845,129496750,129493040,129491941,129490060,129488937,129487018,129481075,129480701,129471204,129468773,129465844,129465520,129448333,129446756	129523509,129518447,129516497,129515994,129515787,129511983,129508096,129506211,129504802,129499841,129498071,129496871,129493075,129492093,129490192,129489085,129487137,129481185,129480814,129471326,129468905,129465962,129465732,129448443,129447301	Gene ID= ENSG00000102038.15 TPM= 5.31 Transcript Type= NA
chrX	129446756	129523510	129446756	129523510	-	transcript2179.chrX.nnic@SMARCA1	transcript2179.chrX.nnic	protein_coding	129523197,129518361,129516331,129515894,129515687,129511804,129507941,129506080,129504734,129499732,129497845,129496750,129491941,129490060,129488937,129487018,129481075,129480701,129471204,129468773,129465844,129465520,129448333,129446756	129523510,129518447,129516497,129515994,129515787,129511983,129508096,129506211,129504802,129499841,129498071,129496871,129492093,129490192,129489085,129487137,129481185,129480814,129471326,129468905,129465962,129465732,129448443,129447301	Gene ID= ENSG00000102038.15 TPM= 2.12 Transcript Type= NA
chrX	129446506	129523485	129446506	129523485	-	ENST00000371123.5@SMARCA1	ENST00000371123.5	protein_coding	129523197,129518361,129516331,129515894,129515687,129511804,129507941,129506080,129504734,129499732,129497845,129496750,129491941,129490060,129488937,129487018,129481075,129480701,129471204,129468773,129465844,129465520,129448333,129446506	129523485,129518447,129516497,129515994,129515787,129511983,129508096,129506211,129504802,129499841,129498071,129496871,129492093,129490192,129489085,129487137,129481185,129480814,129471326,129468905,129465962,129465732,129448443,129447233	Gene ID= ENSG00000102038.15 TPM= 3.19 Transcript Type= protein_coding
chrX	129540275	129592561	129540275	129592561	+	ENST00000357121.5@OCRL	ENST00000357121.5	protein_coding	129540275,129540744,129544958,129548563,129557325,129557861,129558633,129558840,129560550,129561179,129562384,129562599,129565772,129567254,129569264,129575140,129575897,129576317,129587002,129588179,129588886,129589845,129590146	129540478,129540823,129545037,129548601,129557435,129557950,129558753,129559001,129560651,129561293,129562500,129562786,129565883,129567363,129569399,129575250,129576062,129576552,129587118,129588263,129589013,129589956,129592561	Gene ID= ENSG00000122126.15 TPM= 1.59 Transcript Type= protein_coding
chrX	129540275	129592561	129540275	129592561	+	ENST00000371113.8@OCRL	ENST00000371113.8	protein_coding	129540275,129540744,129544958,129548563,129557325,129557861,129558633,129558840,129560550,129561179,129562384,129562599,129565772,129567254,129569264,129575140,129575897,129576317,129584344,129587002,129588179,129588886,129589845,129590146	129540478,129540823,129545037,129548601,129557435,129557950,129558753,129559001,129560651,129561293,129562500,129562786,129565883,129567363,129569399,129575250,129576062,129576552,129584367,129587118,129588263,129589013,129589956,129592561	Gene ID= ENSG00000122126.15 TPM= 1.59 Transcript Type= protein_coding
chrX	129645259	129654937	129645259	129654937	-	ENST00000429967.2@APLN	ENST00000429967.2	protein_coding	129654564,129648621,129645259	129654937,129648792,129647917	Gene ID= ENSG00000171388.11 TPM= 2.12 Transcript Type= protein_coding
chrX	129779984	129795201	129779984	129795201	+	ENST00000356892.3@SASH3	ENST00000356892.3	protein_coding	129779984,129787975,129788431,129790940,129792328,129792627,129792989,129793642	129780154,129788070,129788577,129791081,129792476,129792836,129793139,129795201	Gene ID= ENSG00000122122.9 TPM= 2.12 Transcript Type= protein_coding
chrX	129803288	129843884	129803288	129843884	-	ENST00000357166.10@ZDHHC9	ENST00000357166.10	protein_coding	129843696,129843259,129841779,129828981,129823679,129814658,129813677,129812718,129811406,129810905,129803288	129843884,129843326,129842080,129829141,129823837,129814795,129813725,129812820,129811509,129811001,129806486	Gene ID= ENSG00000188706.12 TPM= 3.19 Transcript Type= protein_coding
chrX	129906183	129929752	129906183	129929752	+	ENST00000394422.7@UTP14A	ENST00000394422.7	protein_coding	129906183,129907367,129908060,129908670,129911008,129911766,129919175,129919395,129920457,129920675,129921194,129924795,129925919,129926240,129929336	129906236,129907442,129908130,129908734,129911150,129911921,129919294,129919489,129920580,129920752,129921587,129925195,129926112,129926339,129929752	Gene ID= ENSG00000156697.12 TPM= 15.93 Transcript Type= protein_coding
chrX	130091203	130093320	130091203	130093320	+	transcript2216.chrX.nnic@NA	transcript2216.chrX.nnic	NA	130091203	130093320	Gene ID= novel_gene_chrX_2217 TPM= 3.19 Transcript Type= NA
chrX	130129370	130165887	130129370	130165887	-	ENST00000287295.7@AIFM1	ENST00000287295.7	protein_coding	130165551,130156461,130149469,130147752,130147493,130145479,130140533,130139795,130138593,130137078,130136643,130136045,130133313,130131675,130129970,130129370	130165887,130156603,130149568,130147876,130147623,130145569,130140617,130139871,130138701,130137185,130136731,130136185,130133455,130131799,130130166,130129628	Gene ID= ENSG00000156709.13 TPM= 290.5 Transcript Type= protein_coding
chrX	130202711	130268899	130202711	130268899	-	ENST00000370978.8@ZNF280C	ENST00000370978.8	protein_coding	130268762,130260419,130246859,130243800,130243563,130239582,130236469,130236214,130230510,130228977,130227682,130226759,130220349,130215791,130215193,130209653,130205297,130205117,130202711	130268899,130260465,130247005,130243865,130243699,130239693,130236639,130236320,130230727,130229134,130227782,130226905,130220480,130216101,130215333,130209715,130205415,130205153,130204992	Gene ID= ENSG00000056277.15 TPM= 1.06 Transcript Type= protein_coding
chrX	130339888	130373361	130339888	130373361	+	ENST00000545805.5@SLC25A14	ENST00000545805.5	protein_coding	130339888,130340107,130345182,130346544,130349251,130350646,130358640,130364628,130365541,130371564,130372909	130339976,130340353,130345275,130346691,130349345,130350731,130358735,130364752,130365676,130371644,130373361	Gene ID= ENSG00000102078.15 TPM= 2.66 Transcript Type= protein_coding
chrX	130339888	130373361	130339888	130373361	+	ENST00000543953.5@SLC25A14	ENST00000543953.5	protein_coding	130339888,130345182,130346544,130349251,130350646,130358640,130364628,130365541,130371564,130372909	130339976,130345275,130346691,130349345,130350731,130358735,130364752,130365676,130371644,130373361	Gene ID= ENSG00000102078.15 TPM= 3.72 Transcript Type= protein_coding
chrX	130401951	130411524	130401951	130411524	+	transcript2235.chrX.nic@RBMX2	transcript2235.chrX.nic	protein_coding	130401951,130402255,130403802,130409257,130411348	130402037,130402370,130403853,130409386,130411524	Gene ID= ENSG00000134597.15 TPM= 3.19 Transcript Type= NA
chrX	130401969	130413343	130401969	130413343	+	ENST00000305536.10@RBMX2	ENST00000305536.10	protein_coding	130401969,130402255,130403802,130409257,130411348,130412361	130402037,130402370,130403853,130409386,130411525,130413343	Gene ID= ENSG00000134597.15 TPM= 6.37 Transcript Type= protein_coding
chrX	130623385	130903317	130623385	130903317	-	ENST00000338144.7@ENOX2	ENST00000338144.7	protein_coding	130903049,130901684,130783547,130709243,130703120,130688863,130679542,130669965,130667530,130665643,130656581,130637229,130634984,130631468,130627958,130623385	130903317,130901731,130783690,130709331,130703254,130689018,130679748,130670198,130667742,130665749,130656695,130637410,130635091,130631576,130628043,130625445	Gene ID= ENSG00000165675.16 TPM= 1.06 Transcript Type= protein_coding
chrX	130623385	130903317	130623385	130903317	-	ENST00000394363.5@ENOX2	ENST00000394363.5	protein_coding	130903049,130901684,130783547,130703120,130688863,130679542,130669965,130667530,130665643,130656581,130637229,130634984,130631468,130627958,130623385	130903317,130901731,130783690,130703254,130689018,130679748,130670198,130667742,130665749,130656695,130637410,130635091,130631576,130628043,130625445	Gene ID= ENSG00000165675.16 TPM= 7.44 Transcript Type= protein_coding
chrX	131273506	131279366	131273506	131279366	-	transcript2255.chrX.nic@IGSF1	transcript2255.chrX.nic	protein_coding	131279271,131279143,131278461,131277856,131276939,131275961,131275478,131274999,131274599,131274083,131273506	131279366,131279175,131278751,131278134,131277226,131276248,131275765,131275286,131274877,131274206,131273931	Gene ID= ENSG00000147255.18 TPM= 22.31 Transcript Type= NA
chrX	131273506	131279056	131273506	131279056	-	transcript2260.chrX.nnic@IGSF1	transcript2260.chrX.nnic	protein_coding	131278871,131278461,131277856,131276939,131275961,131275478,131274999,131274599,131274083,131273506	131279056,131278751,131278134,131277226,131276248,131275765,131275286,131274877,131274206,131273931	Gene ID= ENSG00000147255.18 TPM= 8.5 Transcript Type= NA
chrX	131273506	131279076	131273506	131279076	-	transcript2262.chrX.nic@IGSF1	transcript2262.chrX.nic	protein_coding	131278461,131277856,131276939,131275961,131275478,131274999,131274599,131274083,131273506	131279076,131278134,131277226,131276248,131275765,131275286,131274877,131274206,131273931	Gene ID= ENSG00000147255.18 TPM= 12.75 Transcript Type= NA
chrX	131284166	131289286	131284166	131289286	-	ENST00000370901.4@IGSF1	ENST00000370901.4	protein_coding	131289214,131286605,131286437,131285767,131284166	131289286,131286741,131286463,131286048,131285466	Gene ID= ENSG00000147255.18 TPM= 3.19 Transcript Type= protein_coding
chrX	132203025	132217644	132203025	132217644	-	transcript2266.chrX.nic@RAP2C	transcript2266.chrX.nic	protein_coding	132217278,132216996,132214134,132203025	132217644,132217156,132214446,132205587	Gene ID= ENSG00000123728.9 TPM= 3.72 Transcript Type= NA
chrX	132203025	132218124	132203025	132218124	-	ENST00000342983.6@RAP2C	ENST00000342983.6	protein_coding	132217916,132216996,132214134,132203025	132218124,132217806,132214446,132205587	Gene ID= ENSG00000123728.9 TPM= 4.78 Transcript Type= protein_coding
chrX	133300103	133415490	133300103	133415490	-	ENST00000370828.3@GPC4	ENST00000370828.3	protein_coding	133414806,133339183,133324145,133311258,133306024,133305772,133304725,133303166,133300103	133415490,133339341,133324536,133311423,133306154,133305918,133304861,133303341,133303069	Gene ID= ENSG00000076716.8 TPM= 4.25 Transcript Type= protein_coding
chrX	133535745	133985895	133535745	133985895	-	ENST00000370818.7@GPC3	ENST00000370818.7	protein_coding	133985275,133953050,133753482,133699895,133692369,133661730,133596440,133535745	133985895,133953211,133754176,133700028,133692494,133661850,133596599,133536293	Gene ID= ENSG00000147257.13 TPM= 3.19 Transcript Type= protein_coding
chrX	134373253	134428790	134373253	134428790	+	ENST00000370803.7@PHF6	ENST00000370803.7	protein_coding	134373253,134377572,134378005,134393501,134393909,134413491,134413823,134415016,134417169,134425201,134425661	134373467,134377755,134378106,134393634,134393952,134413657,134413966,134415120,134417302,134425330,134428790	Gene ID= ENSG00000156531.16 TPM= 9.56 Transcript Type= protein_coding
chrX	134373312	134428789	134373312	134428789	+	ENST00000332070.7@PHF6	ENST00000332070.7	protein_coding	134373312,134377572,134378005,134393501,134393909,134413491,134413823,134415016,134417169,134425201	134373467,134377755,134378106,134393634,134393952,134413657,134413966,134415120,134417302,134428789	Gene ID= ENSG00000156531.16 TPM= 2.12 Transcript Type= protein_coding
chrX	134460153	134500668	134460153	134500668	+	ENST00000298556.7@HPRT1	ENST00000298556.7	protein_coding	134460153,134473359,134475181,134486465,134490188,134493508,134498390,134498608,134500030	134460338,134473465,134475364,134486530,134490205,134493590,134498436,134498684,134500668	Gene ID= ENSG00000165704.14 TPM= 37.18 Transcript Type= protein_coding
chrX	134769567	134797219	134769567	134797219	-	transcript2288.chrX.nic@FAM122B	transcript2288.chrX.nic	protein_coding	134797121,134796108,134793815,134789223,134789085,134788730,134787472,134785886,134781821,134769567	134797219,134796355,134793893,134789266,134789139,134788831,134787533,134785950,134781917,134772283	Gene ID= ENSG00000156504.16 TPM= 6.37 Transcript Type= NA
chrX	134769567	134797155	134769567	134797155	-	ENST00000343004.9@FAM122B	ENST00000343004.9	protein_coding	134796108,134793815,134789580,134789223,134789085,134788730,134787472,134785886,134781821,134769567	134797155,134793893,134789636,134789266,134789139,134788831,134787533,134785950,134781917,134772283	Gene ID= ENSG00000156504.16 TPM= 4.25 Transcript Type= protein_coding
chrX	134887626	134915267	134887626	134915267	-	ENST00000370783.7@MOSPD1	ENST00000370783.7	protein_coding	134915182,134899280,134899090,134896817,134891479,134887626	134915267,134899534,134899165,134897034,134891640,134889192	Gene ID= ENSG00000101928.12 TPM= 13.81 Transcript Type= protein_coding
chrX	134896353	134915261	134896353	134915261	-	transcript2298.chrX.nic@MOSPD1	transcript2298.chrX.nic	protein_coding	134915182,134899280,134899090,134896353	134915261,134899534,134899165,134897034	Gene ID= ENSG00000101928.12 TPM= 3.19 Transcript Type= NA
chrX	134990938	134992473	134990938	134992473	+	ENST00000330288.5@SMIM10	ENST00000330288.5	protein_coding	134990938	134992473	Gene ID= ENSG00000184785.5 TPM= 8.5 Transcript Type= protein_coding
chrX	135020504	135022529	135020504	135022529	-	ENST00000391440.2@RTL8B	ENST00000391440.2	protein_coding	135020504	135022529	Gene ID= ENSG00000212747.4 TPM= 13.81 Transcript Type= protein_coding
chrX	135021664	135033542	135021664	135033542	+	transcript2301.chrX.nnic@RTL8C	transcript2301.chrX.nnic	protein_coding	135021664,135032912	135021892,135033542	Gene ID= ENSG00000134590.13 TPM= 10.97 Transcript Type= NA
chrX	135021728	135033542	135021728	135033542	+	transcript2306.chrX.nnic@RTL8C	transcript2306.chrX.nnic	protein_coding	135021728,135032904	135021892,135033542	Gene ID= ENSG00000134590.13 TPM= 7.79 Transcript Type= NA
chrX	135032366	135033546	135032366	135033546	+	ENST00000257013.8@RTL8C	ENST00000257013.8	protein_coding	135032366	135033546	Gene ID= ENSG00000134590.13 TPM= 446.46 Transcript Type= protein_coding
chrX	135050940	135052196	135050940	135052196	-	ENST00000520964.1@RTL8A	ENST00000520964.1	protein_coding	135051917,135050940	135052196,135051476	Gene ID= ENSG00000203950.6 TPM= 4.25 Transcript Type= processed_transcript
chrX	135050932	135052175	135050932	135052175	-	ENST00000370775.2@RTL8A	ENST00000370775.2	protein_coding	135050932	135052175	Gene ID= ENSG00000203950.6 TPM= 50.98 Transcript Type= protein_coding
chrX	135094987	135098634	135094987	135098634	-	ENST00000433425.3@SMIM10L2B	ENST00000433425.3	protein_coding	135098033,135094987	135098634,135097121	Gene ID= ENSG00000196972.8 TPM= 3.19 Transcript Type= protein_coding
chrX	135285788	135344087	135285788	135344087	-	ENST00000370766.7@ZNF75D	ENST00000370766.7	protein_coding	135341768,135295768,135293730,135292281,135291472,135291009,135285788	135344087,135296039,135294258,135292473,135291563,135291135,135287846	Gene ID= ENSG00000186376.14 TPM= 1.06 Transcript Type= protein_coding
chrX	135344796	135363152	135344796	135363152	+	ENST00000339249.4@ZNF449	ENST00000339249.4	protein_coding	135344796,135347019,135349110,135359892,135360193	135344835,135347472,135349314,135360005,135363152	Gene ID= ENSG00000173275.12 TPM= 12.75 Transcript Type= protein_coding
chrX	135421943	135428074	135421943	135428074	+	ENST00000417443.2@SMIM10L2A	ENST00000417443.2	protein_coding	135421943,135423633	135422730,135428074	Gene ID= ENSG00000178947.8 TPM= 1.06 Transcript Type= protein_coding
chrX	135962070	135974063	135962070	135974063	-	ENST00000305963.2@MMGT1	ENST00000305963.2	protein_coding	135973597,135971058,135967390,135962070	135974063,135971110,135967493,135965183	Gene ID= ENSG00000169446.5 TPM= 30.8 Transcript Type= protein_coding
chrX	135985135	136047130	135985135	136047130	+	ENST00000370701.6@SLC9A6	ENST00000370701.6	protein_coding	135985135,135985603,135994786,135998108,135998482,135998856,136002108,136010442,136012949,136013349,136016645,136022586,136024330,136030132,136033414,136040076,136044452	135985477,135985827,135994985,135998185,135998558,135998968,136002213,136010583,136013054,136013437,136016758,136022697,136024483,136030162,136033493,136040181,136047130	Gene ID= ENSG00000198689.10 TPM= 7.44 Transcript Type= protein_coding
chrX	136147465	136211359	136147465	136211359	+	ENST00000370690.7@FHL1	ENST00000370690.7	protein_coding	136147465,136169907,136206407,136207016,136207792,136208455,136209871	136147628,136169980,136206588,136207190,136207961,136208641,136211359	Gene ID= ENSG00000022267.16 TPM= 261.32 Transcript Type= protein_coding
chrX	136168176	136211354	136168176	136211354	+	transcript2356.chrX.nic@FHL1	transcript2356.chrX.nic	protein_coding	136168176,136169907,136206407,136207016,136207792,136208455,136209871	136168288,136169980,136206588,136207190,136207961,136208641,136211354	Gene ID= ENSG00000022267.16 TPM= 196.17 Transcript Type= NA
chrX	136169637	136211359	136169637	136211359	+	ENST00000394153.6@FHL1	ENST00000394153.6	protein_coding	136169637,136169907,136206407,136207016,136207792,136208455,136209871	136169733,136169980,136206588,136207190,136207961,136208641,136211359	Gene ID= ENSG00000022267.16 TPM= 75.98 Transcript Type= protein_coding
chrX	136196757	136211359	136196757	136211359	+	ENST00000539015.5@FHL1	ENST00000539015.5	protein_coding	136196757,136206407,136207016,136207792,136208455,136209871	136196863,136206588,136207190,136207961,136208641,136211359	Gene ID= ENSG00000022267.16 TPM= 74.97 Transcript Type= protein_coding
chrX	136196773	136211359	136196773	136211359	+	ENST00000370683.5@FHL1	ENST00000370683.5	protein_coding	136196773,136206407,136207016,136207792,136208455,136209871	136197134,136206588,136207190,136207961,136208641,136211359	Gene ID= ENSG00000022267.16 TPM= 895.96 Transcript Type= protein_coding
chrX	136167015	136211323	136167015	136211323	+	ENST00000535737.5@FHL1	ENST00000535737.5	protein_coding	136167015,136169907,136206407,136207016,136207792,136208455,136209871	136167098,136169980,136206588,136207190,136207961,136208641,136211323	Gene ID= ENSG00000022267.16 TPM= 14.48 Transcript Type= protein_coding
chrX	136147536	136211354	136147536	136211354	+	ENST00000618438.4@FHL1	ENST00000618438.4	protein_coding	136147536,136169907,136206407,136207016,136207792,136209871	136147628,136169980,136206588,136207190,136207961,136211354	Gene ID= ENSG00000022267.16 TPM= 61.12 Transcript Type= protein_coding
chrX	136209071	136210620	136209071	136210620	-	transcript2385.chrX.nnic@NA	transcript2385.chrX.nnic	NA	136209071	136210620	Gene ID= novel_gene_chrX_2386 TPM= 11.74 Transcript Type= NA
chrX	136216811	136251579	136216811	136251579	-	ENST00000316077.13@MAP7D3	ENST00000316077.13	protein_coding	136251289,136246243,136246065,136244632,136241160,136240382,136236244,136231544,136230839,136230385,136228623,136227284,136225909,136224827,136222393,136220765,136219593,136219398,136216811	136251579,136246341,136246148,136244795,136241277,136240486,136236339,136232220,136230966,136230593,136228758,136227431,136226013,136224880,136222486,136220963,136219671,136219495,136218493	Gene ID= ENSG00000129680.15 TPM= 3.19 Transcript Type= protein_coding
chrX	136497018	136512346	136497018	136512346	+	transcript2402.chrX.nic@HTATSF1	transcript2402.chrX.nic	protein_coding	136497018,136497676,136499598,136500158,136500664,136502778,136504364,136509091,136510082,136510808	136497439,136497870,136499778,136500205,136500818,136502941,136504463,136509180,136510219,136512346	Gene ID= ENSG00000102241.11 TPM= 32.93 Transcript Type= NA
chrX	136497079	136512342	136497079	136512342	+	ENST00000535601.5@HTATSF1	ENST00000535601.5	protein_coding	136497079,136497624,136499598,136500158,136500664,136502778,136504364,136509091,136510082,136510808	136497439,136497870,136499778,136500205,136500818,136502941,136504463,136509180,136510219,136512342	Gene ID= ENSG00000102241.11 TPM= 92.41 Transcript Type= protein_coding
chrX	136497511	136512346	136497511	136512346	+	ENST00000218364.4@HTATSF1	ENST00000218364.4	protein_coding	136497511,136499598,136500158,136500664,136502778,136504364,136509091,136510082,136510808	136497870,136499778,136500205,136500818,136502941,136504463,136509180,136510219,136512346	Gene ID= ENSG00000102241.11 TPM= 125.33 Transcript Type= protein_coding
chrX	136665547	136767737	136665547	136767737	-	transcript2423.chrX.nnic@ARHGEF6	transcript2423.chrX.nnic	protein_coding	136767144,136747508,136745223,136743585,136732102,136713276,136708675,136706908,136690610,136687932,136685677,136682758,136681890,136680731,136677936,136676624,136675007,136672020,136669482,136665547	136767737,136747592,136745347,136743786,136732172,136713370,136708770,136707030,136690748,136687991,136685823,136682844,136681968,136680876,136677956,136676717,136675096,136672119,136669536,136668169	Gene ID= ENSG00000129675.15 TPM= 13.1 Transcript Type= NA
chrX	136665547	136767343	136665547	136767343	-	ENST00000370620.5@ARHGEF6	ENST00000370620.5	protein_coding	136767144,136747508,136745223,136743585,136732102,136713276,136708675,136706908,136690610,136687932,136685677,136682758,136681890,136680731,136679535,136677936,136676624,136675007,136672020,136669482,136665547	136767343,136747592,136745347,136743786,136732172,136713370,136708770,136707030,136690748,136687991,136685823,136682844,136681968,136680876,136679660,136677956,136676717,136675096,136672119,136669536,136668169	Gene ID= ENSG00000129675.15 TPM= 29.03 Transcript Type= protein_coding
chrX	136869192	136880725	136869192	136880725	-	transcript2434.chrX.nic@RBMX	transcript2434.chrX.nic	protein_coding	136880597,136879319,136879017,136877915,136876503,136875471,136875258,136875086,136873246,136872268,136869192	136880725,136879453,136879123,136878086,136876655,136875585,136875383,136875168,136874452,136872345,136870417	Gene ID= ENSG00000147274.14 TPM= 3.19 Transcript Type= NA
chrX	136869192	136880779	136869192	136880779	-	transcript2436.chrX.nic@RBMX	transcript2436.chrX.nic	protein_coding	136880597,136879319,136879017,136877915,136876503,136875471,136875258,136875086,136872268,136869192	136880779,136879453,136879123,136878086,136876655,136875585,136875383,136875168,136872345,136870417	Gene ID= ENSG00000147274.14 TPM= 13.81 Transcript Type= NA
chrX	136869192	136880725	136869192	136880725	-	transcript2437.chrX.nic@RBMX	transcript2437.chrX.nic	protein_coding	136880597,136879319,136879017,136877915,136876503,136875471,136875258,136872268,136869192	136880725,136879453,136879123,136878086,136876655,136875585,136875383,136875168,136870417	Gene ID= ENSG00000147274.14 TPM= 9.56 Transcript Type= NA
chrX	136873461	136880725	136873461	136880725	-	ENST00000320676.11@RBMX	ENST00000320676.11	protein_coding	136880597,136879319,136879017,136877915,136876503,136875471,136875258,136875086,136873461	136880725,136879453,136879123,136878086,136876655,136875585,136875383,136875168,136874452	Gene ID= ENSG00000147274.14 TPM= 78.6 Transcript Type= protein_coding
chrX	136867006	136870819	136867006	136870819	+	transcript2442.chrX.nnic@NA	transcript2442.chrX.nnic	NA	136867006	136870819	Gene ID= novel_gene_chrX_2443 TPM= 3.19 Transcript Type= NA
chrX	138631574	138857680	138631574	138857680	-	transcript2447.chrX.nic@FGF13	transcript2447.chrX.nic	protein_coding	138857512,138708818,138702984,138635457,138631574	138857680,138708928,138703087,138635655,138632986	Gene ID= ENSG00000129682.15 TPM= 2.12 Transcript Type= NA
chrX	139726346	139933070	139726346	139933070	-	ENST00000370557.5@ATP11C	ENST00000370557.5	protein_coding	139932016,139826704,139819338,139816863,139814878,139804471,139802236,139800060,139798679,139798273,139797176,139796273,139789327,139788192,139787173,139785226,139783164,139782547,139774690,139768260,139763316,139761961,139757808,139750025,139745722,139743559,139740991,139737916,139726346	139933070,139826823,139819427,139816943,139814985,139804599,139802339,139800110,139798743,139798354,139797326,139796470,139789488,139788343,139787244,139785299,139783267,139782728,139774953,139768434,139763418,139762097,139757867,139750152,139745857,139743624,139741094,139738069,139728962	Gene ID= ENSG00000101974.14 TPM= 1.06 Transcript Type= protein_coding
chrX	141175745	141177125	141175745	141177125	-	ENST00000370526.3@LDOC1	ENST00000370526.3	protein_coding	141175745	141177125	Gene ID= ENSG00000182195.7 TPM= 8.5 Transcript Type= protein_coding
chrX	143628128	143635204	143628128	143635204	-	ENST00000338017.8@SLITRK4	ENST00000338017.8	protein_coding	143634879,143628128	143635204,143631158	Gene ID= ENSG00000179542.15 TPM= 10.62 Transcript Type= protein_coding
chrX	147911848	147951112	147911848	147951112	+	transcript2463.chrX.nnic@FMR1	transcript2463.chrX.nnic	protein_coding	147911848,147921933,147925540,147928322,147928659,147929948,147930128,147932425,147932685,147934748,147936504,147937466,147940576,147943131,147944869,147945534,147948683	147912230,147921985,147925633,147928393,147928807,147930041,147930244,147932595,147932763,147934801,147936613,147937600,147940662,147943326,147945051,147945616,147951112	Gene ID= ENSG00000102081.13 TPM= 4.25 Transcript Type= NA
chrX	147912020	147951062	147912020	147951062	+	transcript2469.chrX.nic@FMR1	transcript2469.chrX.nic	protein_coding	147912020,147921933,147925540,147928322,147928659,147929948,147930128,147932425,147932685,147936504,147937466,147940576,147943131,147944869,147945534,147948734	147912230,147921985,147925633,147928393,147928807,147930041,147930244,147932595,147932763,147936613,147937600,147940662,147943326,147945051,147945616,147951062	Gene ID= ENSG00000102081.13 TPM= 5.31 Transcript Type= NA
chrX	147911848	147950636	147911848	147950636	+	transcript2475.chrX.nic@FMR1	transcript2475.chrX.nic	protein_coding	147911848,147921933,147925540,147928322,147928659,147929948,147930128,147932425,147932685,147936504,147937466,147940576,147943131,147944944,147945534,147948734	147912230,147921985,147925633,147928393,147928807,147930041,147930244,147932595,147932763,147936613,147937600,147940662,147943326,147945051,147945616,147950636	Gene ID= ENSG00000102081.13 TPM= 3.19 Transcript Type= NA
chrX	147912052	147950636	147912052	147950636	+	ENST00000439526.6@FMR1	ENST00000439526.6	protein_coding	147912052,147921933,147925540,147928322,147928659,147929948,147930128,147932425,147932685,147936510,147937466,147940576,147943131,147944869,147945534,147948734	147912230,147921985,147925633,147928393,147928807,147930041,147930244,147932595,147932763,147936613,147937600,147940662,147943326,147945051,147945616,147950636	Gene ID= ENSG00000102081.13 TPM= 3.19 Transcript Type= protein_coding
chrX	149482543	149505345	149482543	149505345	-	transcript2490.chrX.nic@IDS	transcript2490.chrX.nic	protein_coding	149505035,149504157,149503312,149502075,149500949,149498107,149496346,149490314,149486925,149482543	149505345,149504293,149503489,149502177,149501037,149498307,149496516,149490440,149487098,149483218	Gene ID= ENSG00000010404.17 TPM= 4.25 Transcript Type= NA
chrX	149476990	149505347	149476990	149505347	-	ENST00000340855.10@IDS	ENST00000340855.10	protein_coding	149505035,149504157,149503312,149500949,149498107,149496346,149490314,149486925,149476990	149505347,149504293,149503489,149501037,149498307,149496516,149490440,149487098,149483218	Gene ID= ENSG00000010404.17 TPM= 3.19 Transcript Type= protein_coding
chrX	149487131	149505345	149487131	149505345	-	transcript2510.chrX.nic@IDS	transcript2510.chrX.nic	protein_coding	149505035,149504157,149503312,149502075,149500949,149498107,149496346,149490314,149487131	149505345,149504293,149503489,149502177,149501037,149498307,149496516,149490440,149487313	Gene ID= ENSG00000010404.17 TPM= 2.66 Transcript Type= NA
chrX	149487131	149505347	149487131	149505347	-	ENST00000370441.8@IDS	ENST00000370441.8	protein_coding	149505035,149504157,149503312,149500949,149498107,149496346,149490314,149487131	149505347,149504293,149503489,149501037,149498307,149496516,149490440,149487313	Gene ID= ENSG00000010404.17 TPM= 4.78 Transcript Type= protein_coding
chrX	149511509	149526264	149511509	149526264	-	ENST00000370438.2@AC244197.2	ENST00000370438.2	lincRNA	149525722,149511509	149526264,149511620	Gene ID= ENSG00000238039.1 TPM= 1.06 Transcript Type= lincRNA
chrX	149540608	149547309	149540608	149547309	+	transcript2530.chrX.nic@CXorf40A	transcript2530.chrX.nic	protein_coding	149540608,149542019,149545368,149545602,149546739	149540799,149542085,149545500,149545883,149547309	Gene ID= ENSG00000197620.10 TPM= 7.17 Transcript Type= NA
chrX	149541013	149547309	149541013	149547309	+	transcript2533.chrX.nic@CXorf40A	transcript2533.chrX.nic	protein_coding	149541013,149542019,149545368,149545602,149546739	149541292,149542066,149545500,149545883,149547309	Gene ID= ENSG00000197620.10 TPM= 3.98 Transcript Type= NA
chrX	149540630	149547309	149540630	149547309	+	ENST00000450602.6@CXorf40A	ENST00000450602.6	protein_coding	149540630,149542019,149545368,149545602,149546739	149540799,149542066,149545500,149545883,149547309	Gene ID= ENSG00000197620.10 TPM= 12.48 Transcript Type= protein_coding
chrX	149540975	149547309	149540975	149547309	+	ENST00000423421.5@CXorf40A	ENST00000423421.5	protein_coding	149540975,149542019,149545368,149545602,149546739	149541343,149542066,149545500,149545883,149547309	Gene ID= ENSG00000197620.10 TPM= 14.6 Transcript Type= protein_coding
chrX	149540987	149549940	149540987	149549940	+	ENST00000434353.6@CXorf40A	ENST00000434353.6	protein_coding	149540987,149542019,149545368,149545602,149546739,149549416	149541343,149542066,149545500,149545883,149546917,149549940	Gene ID= ENSG00000197620.10 TPM= 1.06 Transcript Type= protein_coding
chrX	149548210	149549932	149548210	149549932	-	ENST00000431993.3@HSFX3	ENST00000431993.3	protein_coding	149549370,149548210	149549932,149548910	Gene ID= ENSG00000283697.2 TPM= 1.06 Transcript Type= protein_coding
chrX	149596556	149631912	149596556	149631912	-	ENST00000600449.7@TMEM185A	ENST00000600449.7	protein_coding	149631543,149611287,149608627,149603987,149600303,149599554,149596556	149631912,149611463,149608834,149604070,149600479,149599677,149598255	Gene ID= ENSG00000269556.7 TPM= 28.15 Transcript Type= protein_coding
chrX	149596557	149631912	149596557	149631912	-	ENST00000611119.4@TMEM185A	ENST00000611119.4	protein_coding	149631543,149608627,149603987,149600303,149599554,149596557	149631912,149608834,149604070,149600479,149599677,149598255	Gene ID= ENSG00000269556.7 TPM= 2.66 Transcript Type= protein_coding
chrX	149596556	149769758	149596556	149769758	-	transcript2543.chrX.nnic@TMEM185A	transcript2543.chrX.nnic	protein_coding	149769699,149769025,149600303,149599554,149596556	149769758,149769073,149600479,149599677,149598255	Gene ID= ENSG00000269556.7 TPM= 3.19 Transcript Type= NA
chrX	149603709	149631698	149603709	149631698	-	ENST00000507237.5@TMEM185A	ENST00000507237.5	protein_coding	149631543,149611287,149608627,149603709	149631698,149611463,149608834,149604070	Gene ID= ENSG00000269556.7 TPM= 3.19 Transcript Type= protein_coding
chrX	149932197	149938557	149932197	149938557	-	transcript2550.chrX.nnic@CXorf40B	transcript2550.chrX.nnic	protein_coding	149938193,149937433,149934005,149933622,149932434,149932197	149938557,149937480,149934137,149933903,149932767,149932345	Gene ID= ENSG00000197021.8 TPM= 4.67 Transcript Type= NA
chrX	149932197	149938475	149932197	149938475	-	transcript2552.chrX.nnic@CXorf40B	transcript2552.chrX.nnic	protein_coding	149938193,149937633,149937433,149934005,149933622,149932197	149938475,149937745,149937480,149934137,149933903,149932767	Gene ID= ENSG00000197021.8 TPM= 3.96 Transcript Type= NA
chrX	149932197	149938811	149932197	149938811	-	ENST00000370406.7@CXorf40B	ENST00000370406.7	protein_coding	149938193,149937433,149934005,149933622,149932197	149938811,149937480,149934137,149933903,149932767	Gene ID= ENSG00000197021.8 TPM= 15.65 Transcript Type= protein_coding
chrX	149932197	149938505	149932197	149938505	-	transcript2555.chrX.nic@CXorf40B	transcript2555.chrX.nic	protein_coding	149938142,149937433,149934005,149933622,149932197	149938505,149937480,149934137,149933903,149932767	Gene ID= ENSG00000197021.8 TPM= 5.02 Transcript Type= NA
chrX	149932201	149938459	149932201	149938459	-	ENST00000370404.5@CXorf40B	ENST00000370404.5	protein_coding	149938193,149937414,149934005,149933622,149932201	149938459,149937480,149934137,149933903,149932767	Gene ID= ENSG00000197021.8 TPM= 2.55 Transcript Type= protein_coding
chrX	150568619	150673322	150568619	150673322	+	ENST00000370396.6@MTM1	ENST00000370396.6	protein_coding	150568619,150592605,150596498,150598592,150614589,150619038,150638943,150641269,150645683,150649716,150657821,150659664,150660371,150663433,150671428	150568662,150592677,150596570,150598686,150614699,150619139,150639026,150641418,150645871,150649901,150658027,150659756,150660484,150663609,150673322	Gene ID= ENSG00000171100.14 TPM= 2.12 Transcript Type= protein_coding
chrX	150693373	150764924	150693373	150764924	+	transcript2566.chrX.nic@MTMR1	transcript2566.chrX.nic	protein_coding	150693373,150699195,150712342,150712944,150718625,150727215,150727684,150730109,150730525,150731470,150732542,150736595,150737242,150744361,150750730,150755689,150762565	150693676,150699300,150712365,150712970,150718700,150727309,150727791,150730210,150730608,150731619,150732730,150736780,150737448,150744453,150750843,150755865,150764924	Gene ID= ENSG00000063601.16 TPM= 7.44 Transcript Type= NA
chrX	150718587	150764924	150718587	150764924	+	transcript2569.chrX.nnic@MTMR1	transcript2569.chrX.nnic	protein_coding	150718587,150727215,150727684,150730107,150730525,150731468,150732539,150736595,150737242,150744361,150750730,150755689,150762565	150718700,150727309,150727791,150730210,150730608,150731619,150732730,150736780,150737448,150744453,150750843,150755865,150764924	Gene ID= ENSG00000063601.16 TPM= 6.37 Transcript Type= NA
chrX	150766337	150898706	150766337	150898706	-	ENST00000370377.7@CD99L2	ENST00000370377.7	protein_coding	150898522,150831231,150816007,150814862,150795418,150795206,150793691,150777444,150776174,150770304,150766337	150898706,150831293,150816078,150814936,150795486,150795289,150793756,150777482,150776293,150770369,150769101	Gene ID= ENSG00000102181.20 TPM= 150.83 Transcript Type= protein_coding
chrX	150983286	150990775	150983286	150990775	+	ENST00000325307.11@HMGB3	ENST00000325307.11	protein_coding	150983286,150985595,150986051,150987128,150987777	150983376,150985749,150986190,150987302,150990775	Gene ID= ENSG00000029993.14 TPM= 7.44 Transcript Type= protein_coding
chrX	150984381	150987932	150984381	150987932	+	transcript2579.chrX.nnic@HMGB3	transcript2579.chrX.nnic	protein_coding	150984381,150985595,150986051,150987128,150987777	150984625,150985749,150986190,150987302,150987932	Gene ID= ENSG00000029993.14 TPM= 2.12 Transcript Type= NA
chrX	151397204	151409364	151397204	151409364	+	ENST00000330374.6@VMA21	ENST00000330374.6	protein_coding	151397204,151403631,151404916	151397361,151403740,151409364	Gene ID= ENSG00000160131.13 TPM= 18.06 Transcript Type= protein_coding
chrX	151716035	151723194	151716035	151723194	+	ENST00000370350.7@FATE1	ENST00000370350.7	protein_coding	151716035,151717272,151721395,151721903,151722628	151716225,151717399,151721501,151721981,151723194	Gene ID= ENSG00000147378.11 TPM= 2.12 Transcript Type= protein_coding
chrX	152826973	152830777	152826973	152830777	-	ENST00000370277.3@CETN2	ENST00000370277.3	protein_coding	152830708,152829602,152829149,152828537,152826973	152830777,152829760,152829277,152828674,152827930	Gene ID= ENSG00000147400.8 TPM= 1.06 Transcript Type= protein_coding
chrX	152830967	152869729	152830967	152869729	+	ENST00000370274.7@NSDHL	ENST00000370274.7	protein_coding	152830967,152846282,152850265,152858770,152862596,152865819,152867571,152868784	152831117,152846432,152850423,152858916,152862724,152865961,152867673,152869729	Gene ID= ENSG00000147383.10 TPM= 3.19 Transcript Type= protein_coding
chrX	152830994	152869363	152830994	152869363	+	transcript2595.chrX.nnic@NSDHL	transcript2595.chrX.nnic	protein_coding	152830994,152846282,152850265,152862596,152865819,152867571,152868784	152831117,152846432,152850423,152862724,152865961,152867673,152869363	Gene ID= ENSG00000147383.10 TPM= 2.12 Transcript Type= NA
chrX	152941701	152973472	152941701	152973472	+	ENST00000454925.1@ZNF185	ENST00000454925.1	protein_coding	152941701,152945267,152959699,152963839,152965447,152967167,152969382,152970443,152971274	152941830,152945464,152959896,152963949,152965527,152967238,152969484,152970541,152973472	Gene ID= ENSG00000147394.18 TPM= 1.06 Transcript Type= protein_coding
chrX	153056482	153060462	153056482	153060462	+	ENST00000424805.1@PNMA3	ENST00000424805.1	protein_coding	153056482,153056950,153059284	153056638,153058771,153060462	Gene ID= ENSG00000183837.9 TPM= 1.06 Transcript Type= nonsense_mediated_decay
chrX	153072482	153075018	153072482	153075018	+	ENST00000421798.4@PNMA6A	ENST00000421798.4	protein_coding	153072482,153072935	153072606,153075018	Gene ID= ENSG00000235961.5 TPM= 2.12 Transcript Type= protein_coding
chrX	153334202	153352923	153334202	153352923	+	transcript2599.chrX.nic@ZNF275	transcript2599.chrX.nic	protein_coding	153334202,153336634,153345520,153346819	153334285,153336710,153345621,153352923	Gene ID= ENSG00000063587.13 TPM= 5.31 Transcript Type= NA
chrX	153447666	153470631	153447666	153470631	-	ENST00000370211.8@HAUS7	ENST00000370211.8	protein_coding	153470450,153469146,153464988,153462610,153457137,153456493,153456265,153455542,153454394,153447666	153470631,153469261,153465055,153462671,153457228,153456651,153456364,153455766,153454508,153447909	Gene ID= ENSG00000213397.10 TPM= 23.37 Transcript Type= protein_coding
chrX	153458785	153460572	153458785	153460572	+	transcript2612.chrX.nnic@NA	transcript2612.chrX.nnic	NA	153458785	153460572	Gene ID= novel_gene_chrX_2613 TPM= 2.12 Transcript Type= NA
chrX	153494939	153509554	153494939	153509554	+	ENST00000331595.8@BGN	ENST00000331595.8	protein_coding	153494939,153504621,153505238,153505863,153506529,153506830,153507047,153508248	153495113,153504869,153505350,153506076,153506639,153506923,153507185,153509554	Gene ID= ENSG00000182492.15 TPM= 215.62 Transcript Type= protein_coding
chrX	153587927	153599198	153587927	153599198	-	transcript2618.chrX.nnic@FAM58A	transcript2618.chrX.nnic	protein_coding	153598962,153596004,153594547,153592506,153587927	153599198,153596187,153594679,153592703,153588454	Gene ID= ENSG00000262919.7 TPM= 3.19 Transcript Type= NA
chrX	153587932	153599117	153587932	153599117	-	ENST00000621629.4@FAM58A	ENST00000621629.4	protein_coding	153598966,153596004,153594547,153592506,153587932	153599117,153596187,153594679,153592733,153588454	Gene ID= ENSG00000262919.7 TPM= 6.37 Transcript Type= nonsense_mediated_decay
chrX	153669733	153673693	153669733	153673693	-	ENST00000370150.5@PNCK	ENST00000370150.5	protein_coding	153673517,153673009,153672566,153672126,153671880,153671549,153671285,153671078,153670918,153670744,153670450,153669733	153673693,153673078,153672697,153672200,153672018,153671672,153671360,153671190,153670996,153670831,153670594,153670126	Gene ID= ENSG00000130822.15 TPM= 1.06 Transcript Type= protein_coding
chrX	153669730	153673845	153669730	153673845	-	ENST00000340888.7@PNCK	ENST00000340888.7	protein_coding	153673780,153673009,153672566,153672126,153671880,153671549,153671285,153671078,153670918,153670744,153670450,153669730	153673845,153673078,153672697,153672200,153672018,153671672,153671360,153671190,153670996,153670831,153670594,153670130	Gene ID= ENSG00000130822.15 TPM= 4.25 Transcript Type= protein_coding
chrX	153688099	153696593	153688099	153696593	+	ENST00000253122.9@SLC6A8	ENST00000253122.9	protein_coding	153688099,153690375,153691304,153691975,153693041,153693263,153693462,153693905,153694130,153694344,153694533,153694719,153695074	153688836,153690506,153691553,153692107,153693175,153693366,153693586,153694017,153694267,153694446,153694633,153694889,153696593	Gene ID= ENSG00000130821.15 TPM= 129.58 Transcript Type= protein_coding
chrX	153700497	153724697	153700497	153724697	-	ENST00000345046.10@BCAP31	ENST00000345046.10	protein_coding	153724334,153723153,153720872,153715542,153703959,153702935,153702007,153700497	153724697,153723288,153720972,153715689,153704094,153703058,153702107,153700975	Gene ID= ENSG00000185825.15 TPM= 339.79 Transcript Type= protein_coding
chrX	153700499	153724094	153700499	153724094	-	ENST00000458587.6@BCAP31	ENST00000458587.6	protein_coding	153723508,153723153,153720872,153715542,153703959,153702935,153702007,153700499	153724094,153723288,153720972,153715689,153704094,153703058,153702107,153700975	Gene ID= ENSG00000185825.15 TPM= 4.78 Transcript Type= protein_coding
chrX	153739129	153744762	153739129	153744762	+	transcript2655.chrX.nic@ABCD1	transcript2655.chrX.nic	protein_coding	153739129,153740574,153742987,153743221,153743489	153740237,153740719,153743071,153743346,153744762	Gene ID= ENSG00000101986.11 TPM= 2.12 Transcript Type= NA
chrX	153724868	153744762	153724868	153744762	+	ENST00000218104.5@ABCD1	ENST00000218104.5	protein_coding	153724868,153729232,153736112,153736345,153737157,153740092,153740574,153742987,153743221,153743489	153726166,153729412,153736254,153736513,153737251,153740237,153740719,153743071,153743346,153744762	Gene ID= ENSG00000101986.11 TPM= 18.06 Transcript Type= protein_coding
chrX	153781000	153785730	153781000	153785730	+	transcript2662.chrX.nic@SRPK3	transcript2662.chrX.nic	protein_coding	153781000,153781216,153781505,153781743,153782121,153782772,153782953,153783226,153783974,153784294,153784750,153784934,153785081,153785336	153781145,153781346,153781613,153781830,153782208,153782878,153783118,153783884,153784213,153784394,153784857,153785003,153785173,153785730	Gene ID= ENSG00000184343.10 TPM= 9.69 Transcript Type= NA
chrX	153781002	153785730	153781002	153785730	+	transcript2663.chrX.nic@SRPK3	transcript2663.chrX.nic	protein_coding	153781002,153781505,153781743,153782121,153782772,153782953,153783226,153783752,153783974,153784294,153784750,153784934,153785081,153785336	153781346,153781613,153781830,153782208,153782878,153783118,153783251,153783884,153784213,153784394,153784857,153785003,153785173,153785730	Gene ID= ENSG00000184343.10 TPM= 15.53 Transcript Type= NA
chrX	153781000	153785730	153781000	153785730	+	transcript2665.chrX.nic@SRPK3	transcript2665.chrX.nic	protein_coding	153781000,153781216,153781505,153781743,153782121,153782772,153782953,153783226,153783974,153784294,153784934,153785081,153785336	153781145,153781346,153781613,153781830,153782208,153782878,153783118,153783884,153784213,153784857,153785003,153785173,153785730	Gene ID= ENSG00000184343.10 TPM= 4.85 Transcript Type= NA
chrX	153781000	153785730	153781000	153785730	+	transcript2667.chrX.nic@SRPK3	transcript2667.chrX.nic	protein_coding	153781000,153781216,153781505,153781743,153782121,153782772,153782953,153783974,153784294,153784750,153784934,153785081,153785336	153781145,153781346,153781613,153781830,153782208,153782878,153783884,153784213,153784394,153784857,153785003,153785173,153785730	Gene ID= ENSG00000184343.10 TPM= 10.75 Transcript Type= NA
chrX	153781041	153785728	153781041	153785728	+	ENST00000370101.7@SRPK3	ENST00000370101.7	protein_coding	153781041,153781216,153781505,153781743,153782121,153782772,153782953,153783226,153783752,153783974,153784294,153784750,153784934,153785081,153785336	153781145,153781346,153781613,153781830,153782208,153782878,153783118,153783251,153783884,153784213,153784394,153784857,153785003,153785173,153785728	Gene ID= ENSG00000184343.10 TPM= 49.89 Transcript Type= protein_coding
chrX	153784832	153785727	153784832	153785727	+	transcript2696.chrX.nnic@NA	transcript2696.chrX.nnic	NA	153784832	153785727	Gene ID= novel_gene_chrX_2697 TPM= 6.37 Transcript Type= NA
chrX	153785766	153794523	153785766	153794523	-	ENST00000217901.9@IDH3G	ENST00000217901.9	protein_coding	153794246,153790810,153790564,153790195,153789712,153788075,153787823,153787464,153787051,153786801,153786355,153786212,153785766	153794523,153790851,153790575,153790292,153789824,153788135,153787955,153787597,153787153,153786947,153786449,153786272,153785973	Gene ID= ENSG00000067829.18 TPM= 121.8 Transcript Type= protein_coding
chrX	153785766	153794407	153785766	153794407	-	transcript2671.chrX.nic@IDH3G	transcript2671.chrX.nic	protein_coding	153794315,153790810,153790564,153790195,153789712,153788075,153787823,153787464,153787051,153786801,153786355,153786212,153785766	153794407,153790851,153790575,153790292,153789824,153788135,153787955,153787597,153787153,153786947,153786449,153786272,153785973	Gene ID= ENSG00000067829.18 TPM= 11.33 Transcript Type= NA
chrX	153793516	153798498	153793516	153798498	+	ENST00000320857.7@SSR4	ENST00000320857.7	protein_coding	153793516,153794674,153796434,153797458,153797725,153798071,153798329	153794585,153794754,153796552,153797532,153797814,153798136,153798498	Gene ID= ENSG00000180879.13 TPM= 12.37 Transcript Type= protein_coding
chrX	153794621	153798498	153794621	153798498	+	transcript2692.chrX.nic@SSR4	transcript2692.chrX.nic	protein_coding	153794621,153795663,153797458,153797725,153798071,153798329	153794754,153796552,153797532,153797814,153798136,153798498	Gene ID= ENSG00000180879.13 TPM= 8.13 Transcript Type= NA
chrX	153794639	153798505	153794639	153798505	+	ENST00000370086.7@SSR4	ENST00000370086.7	protein_coding	153794639,153796434,153797458,153797725,153798071,153798329	153794754,153796552,153797532,153797814,153798136,153798505	Gene ID= ENSG00000180879.13 TPM= 121.51 Transcript Type= protein_coding
chrX	153794679	153798493	153794679	153798493	+	ENST00000471880.5@SSR4	ENST00000471880.5	protein_coding	153794679,153795663,153796439,153797458,153797725,153798071,153798329	153794754,153795861,153796552,153797532,153797814,153798136,153798493	Gene ID= ENSG00000180879.13 TPM= 9.19 Transcript Type= processed_transcript
chrX	153861514	153875944	153861514	153875944	-	ENST00000361981.7@L1CAM	ENST00000361981.7	protein_coding	153875761,153872592,153872152,153871057,153870790,153870388,153870056,153869803,153869520,153868841,153868561,153868302,153867998,153867800,153867356,153867054,153866649,153865704,153865299,153865088,153864821,153864585,153864322,153863883,153863477,153861514	153875944,153872697,153872354,153871179,153870960,153870499,153870240,153869934,153869663,153868952,153868727,153868458,153868122,153867910,153867553,153867124,153866871,153865819,153865500,153865210,153864994,153864704,153864477,153864017,153863549,153862894	Gene ID= ENSG00000198910.12 TPM= 2.12 Transcript Type= protein_coding
chrX	153904735	153907166	153904735	153907166	+	ENST00000358927.6@AVPR2	ENST00000358927.6	protein_coding	153904735,153904974,153905532,153906523	153904771,153905170,153906416,153907166	Gene ID= ENSG00000126895.13 TPM= 6.37 Transcript Type= protein_coding
chrX	153919782	153926292	153919782	153926292	-	transcript2714.chrX.nic@ARHGAP4	transcript2714.chrX.nic	protein_coding	153926136,153921605,153921365,153921097,153919782	153926292,153921809,153921527,153921159,153920808	Gene ID= ENSG00000089820.15 TPM= 5.31 Transcript Type= NA
chrX	153919782	153922046	153919782	153922046	-	transcript2718.chrX.nic@ARHGAP4	transcript2718.chrX.nic	protein_coding	153921605,153921365,153921097,153919782	153922046,153921527,153921159,153920808	Gene ID= ENSG00000089820.15 TPM= 3.19 Transcript Type= NA
chrX	153907377	153926244	153907377	153926244	-	ENST00000350060.9@ARHGAP4	ENST00000350060.9	protein_coding	153926136,153921605,153921365,153921097,153920626,153919155,153918832,153913778,153913409,153913218,153913024,153912700,153911129,153910922,153910700,153910506,153910171,153910012,153909741,153909443,153909070,153907377	153926244,153921809,153921527,153921159,153920808,153919283,153919053,153913879,153913600,153913302,153913051,153912802,153911189,153910999,153910834,153910611,153910404,153910085,153909924,153909535,153909169,153907962	Gene ID= ENSG00000089820.15 TPM= 4.25 Transcript Type= protein_coding
chrX	153929242	153935223	153929242	153935223	-	ENST00000464845.5@NAA10	ENST00000464845.5	protein_coding	153934884,153934377,153933943,153932539,153932316,153932071,153930763,153929242	153935223,153934475,153934001,153932584,153932431,153932115,153930847,153930223	Gene ID= ENSG00000102030.15 TPM= 74.35 Transcript Type= protein_coding
chrX	153929926	153935073	153929926	153935073	-	transcript2713.chrX.nic@NAA10	transcript2713.chrX.nic	protein_coding	153934884,153934377,153933943,153932539,153930763,153929926	153935073,153934475,153934001,153932584,153932431,153930223	Gene ID= ENSG00000102030.15 TPM= 9.56 Transcript Type= NA
chrX	153929926	153935015	153929926	153935015	-	ENST00000466877.5@NAA10	ENST00000466877.5	protein_coding	153934884,153934377,153933943,153932539,153932071,153930763,153929926	153935015,153934475,153934001,153932584,153932431,153930847,153930223	Gene ID= ENSG00000102030.15 TPM= 9.21 Transcript Type= retained_intron
chrX	153929924	153935015	153929924	153935015	-	ENST00000370009.5@NAA10	ENST00000370009.5	protein_coding	153934884,153934377,153933943,153932539,153932316,153930763,153929924	153935015,153934475,153934001,153932584,153932431,153930847,153930223	Gene ID= ENSG00000102030.15 TPM= 3.9 Transcript Type= protein_coding
chrX	153935263	153944691	153935263	153944691	-	ENST00000393700.7@RENBP	ENST00000393700.7	protein_coding	153944584,153944309,153944080,153943895,153943546,153942855,153941950,153941478,153940102,153935489,153935263	153944691,153944418,153944155,153943970,153943718,153943079,153942031,153941653,153940233,153935576,153935404	Gene ID= ENSG00000102032.12 TPM= 3.19 Transcript Type= protein_coding
chrX	153947553	153971807	153947553	153971807	-	ENST00000310441.11@HCFC1	ENST00000310441.11	protein_coding	153970648,153964578,153964124,153963225,153962222,153961542,153960235,153959802,153959331,153958569,153958025,153957782,153957314,153956918,153956625,153956191,153954066,153953607,153952514,153951841,153951589,153951350,153950813,153950243,153949553,153947553	153971807,153964726,153964284,153963433,153962306,153961648,153960414,153960161,153959491,153958766,153958249,153957886,153957533,153957060,153956763,153956411,153955542,153953770,153952958,153952158,153951707,153951487,153950998,153950543,153949616,153949386	Gene ID= ENSG00000172534.13 TPM= 48.86 Transcript Type= protein_coding
chrX	153972327	153983195	153972327	153983195	+	ENST00000369982.4@TMEM187	ENST00000369982.4	protein_coding	153972327,153981850	153972860,153983195	Gene ID= ENSG00000177854.7 TPM= 24.43 Transcript Type= protein_coding
chrX	154010506	154019910	154010506	154019910	-	transcript2727.chrX.nnic@IRAK1	transcript2727.chrX.nnic	protein_coding	154019677,154019431,154019197,154018975,154018599,154018291,154018006,154016949,154016437,154016032,154014139,154014042,154013043,154012529,154010506	154019910,154019598,154019328,154019078,154018787,154018355,154018120,154017067,154016644,154016097,154014278,154014095,154013433,154012678,154011917	Gene ID= ENSG00000184216.13 TPM= 11.76 Transcript Type= NA
chrX	154010500	154019980	154010500	154019980	-	ENST00000369980.7@IRAK1	ENST00000369980.7	protein_coding	154019677,154019431,154019197,154018975,154018599,154018291,154018006,154016949,154016437,154016032,154014042,154013043,154012529,154010500	154019980,154019598,154019328,154019078,154018787,154018355,154018120,154017067,154016644,154016097,154014278,154013433,154012678,154011917	Gene ID= ENSG00000184216.13 TPM= 49.9 Transcript Type= protein_coding
chrX	154010506	154019902	154010506	154019902	-	transcript2734.chrX.nic@IRAK1	transcript2734.chrX.nic	protein_coding	154019431,154019197,154018975,154018599,154018291,154018006,154016949,154016437,154016032,154014042,154013043,154012529,154010506	154019902,154019328,154019078,154018787,154018355,154018120,154017067,154016644,154016097,154014278,154013433,154012678,154011917	Gene ID= ENSG00000184216.13 TPM= 16.97 Transcript Type= NA
chrX	154010507	154013372	154010507	154013372	-	transcript2742.chrX.nnic@NA	transcript2742.chrX.nnic	NA	154010507	154013372	Gene ID= novel_gene_chrX_2743 TPM= 4.96 Transcript Type= NA
chrX	154021573	154097755	154021573	154097755	-	ENST00000303391.10@MECP2	ENST00000303391.10	protein_coding	154097604,154092184,154032207,154021573	154097755,154092307,154032557,154031450	Gene ID= ENSG00000169057.21 TPM= 13.81 Transcript Type= protein_coding
chrX	154030234	154097764	154030234	154097764	-	ENST00000453960.6@MECP2	ENST00000453960.6	protein_coding	154097604,154032207,154030234	154097764,154032557,154031450	Gene ID= ENSG00000169057.21 TPM= 12.75 Transcript Type= protein_coding
chrX	154094966	154097523	154094966	154097523	-	ENST00000629277.1@MECP2	ENST00000629277.1	protein_coding	154094966	154097523	Gene ID= ENSG00000169057.21 TPM= 2.12 Transcript Type= retained_intron
chrX	154348529	154371222	154348529	154371222	-	ENST00000369856.7@FLNA	ENST00000369856.7	protein_coding	154370873,154367842,154367641,154367397,154366732,154366562,154366308,154366024,154365349,154365136,154364821,154364526,154364259,154364022,154362661,154362418,154362242,154361979,154361670,154361308,154359990,154359732,154359484,154359246,154358984,154358445,154358199,154357434,154357251,154354825,154354616,154354381,154354151,154353915,154353554,154353296,154353001,154352772,154352553,154352181,154351884,154351581,154350909,154350031,154349649,154349362,154348529	154371222,154368090,154367738,154367544,154366850,154366639,154366470,154366224,154365486,154365259,154364957,154364719,154364372,154364165,154362784,154362578,154362332,154362148,154361787,154361570,154360587,154359905,154359646,154359406,154359154,154358568,154358355,154357623,154357274,154355072,154354711,154354483,154354291,154354043,154353727,154353457,154353204,154352924,154352675,154352447,154352021,154351696,154351041,154350207,154349867,154349565,154349036	Gene ID= ENSG00000196924.14 TPM= 195.44 Transcript Type= protein_coding
chrX	154348525	154353794	154348525	154353794	-	transcript2761.chrX.nnic@NA	transcript2761.chrX.nnic	NA	154348525	154353794	Gene ID= novel_gene_chrX_2762 TPM= 37.18 Transcript Type= NA
chrX	154361365	154363427	154361365	154363427	+	transcript2759.chrX.nnic@NA	transcript2759.chrX.nnic	NA	154361365	154363427	Gene ID= novel_gene_chrX_2760 TPM= 4.25 Transcript Type= NA
chrX	154379197	154381523	154379197	154381523	+	ENST00000369842.8@EMD	ENST00000369842.8	protein_coding	154379197,154379690,154379942,154380234,154380753,154380882	154379566,154379794,154380019,154380367,154380802,154381523	Gene ID= ENSG00000102119.10 TPM= 46.74 Transcript Type= protein_coding
chrX	154379243	154381523	154379243	154381523	+	transcript2766.chrX.nnic@EMD	transcript2766.chrX.nnic	protein_coding	154379243,154379690,154379942,154381456	154379566,154379794,154379959,154381523	Gene ID= ENSG00000102119.10 TPM= 2.12 Transcript Type= NA
chrX	154397154	154400917	154397154	154400917	+	ENST00000369817.6@RPL10	ENST00000369817.6	protein_coding	154397154,154398065,154398497,154399338,154399487,154399803,154400464,154400702	154397376,154398394,154398542,154399396,154399594,154399941,154400626,154400917	Gene ID= ENSG00000147403.16 TPM= 947.45 Transcript Type= protein_coding
chrX	154398372	154402339	154398372	154402339	+	ENST00000344746.8@RPL10	ENST00000344746.8	protein_coding	154398372,154399338,154399487,154399803,154400464,154400702	154398542,154399396,154399594,154399941,154400626,154402339	Gene ID= ENSG00000147403.16 TPM= 21.24 Transcript Type= protein_coding
chrX	154398377	154400913	154398377	154400913	+	ENST00000491035.5@RPL10	ENST00000491035.5	protein_coding	154398377,154399338,154399487,154399803,154400702	154398542,154399396,154399594,154400626,154400913	Gene ID= ENSG00000147403.16 TPM= 8.5 Transcript Type= retained_intron
chrX	154401761	154412112	154401761	154412112	-	ENST00000309585.9@DNASE1L1	ENST00000309585.9	protein_coding	154411891,154409112,154405434,154404995,154404828,154403522,154403269,154402942,154401761	154412112,154409196,154405655,154405083,154404914,154403622,154403381,154403190,154402841	Gene ID= ENSG00000013563.13 TPM= 12.21 Transcript Type= protein_coding
chrX	154401758	154409276	154401758	154409276	-	ENST00000369807.5@DNASE1L1	ENST00000369807.5	protein_coding	154409112,154405434,154404995,154404828,154403522,154403269,154402942,154401758	154409276,154405655,154405083,154404914,154403622,154403381,154403190,154402841	Gene ID= ENSG00000013563.13 TPM= 16.46 Transcript Type= protein_coding
chrX	154409823	154410727	154409823	154410727	+	transcript2828.chrX.nnic@NA	transcript2828.chrX.nnic	NA	154409823	154410727	Gene ID= novel_gene_chrX_2829 TPM= 2.12 Transcript Type= NA
chrX	154411055	154412102	154411055	154412102	-	transcript2834.chrX.nnic@NA	transcript2834.chrX.nnic	NA	154411055	154412102	Gene ID= novel_gene_chrX_2835 TPM= 2.12 Transcript Type= NA
chrX	154411534	154421726	154411534	154421726	+	transcript2778.chrX.nic@TAZ	transcript2778.chrX.nic	protein_coding	154411534,154412086,154413207,154413482,154414101,154419543,154419705,154420032,154420212,154420658,154420903	154411952,154412214,154413339,154413567,154414190,154419623,154419746,154420094,154420264,154420735,154421726	Gene ID= ENSG00000102125.15 TPM= 3.19 Transcript Type= NA
chrX	154411561	154421726	154411561	154421726	+	ENST00000615986.4@TAZ	ENST00000615986.4	protein_coding	154411561,154412086,154413207,154413482,154419543,154419705,154420032,154420212,154420658,154420903	154411952,154412214,154413358,154413567,154419623,154419746,154420094,154420264,154420735,154421726	Gene ID= ENSG00000102125.15 TPM= 1.06 Transcript Type= nonsense_mediated_decay
chrX	154411534	154421726	154411534	154421726	+	transcript2796.chrX.nnic@TAZ	transcript2796.chrX.nnic	protein_coding	154411534,154412086,154413207,154413482,154414101,154420032,154420212,154420658,154420903	154411952,154412214,154413252,154413567,154414190,154420094,154420264,154420735,154421726	Gene ID= ENSG00000102125.15 TPM= 3.19 Transcript Type= NA
chrX	154411534	154421726	154411534	154421726	+	transcript2810.chrX.nic@TAZ	transcript2810.chrX.nic	protein_coding	154411534,154412086,154413207,154413482,154419543,154420212,154420658,154420903	154411952,154412214,154413339,154413567,154420094,154420264,154420735,154421726	Gene ID= ENSG00000102125.15 TPM= 4.25 Transcript Type= NA
chrX	154411534	154421726	154411534	154421726	+	transcript2814.chrX.nic@TAZ	transcript2814.chrX.nic	protein_coding	154411534,154412086,154413207,154414101,154419543,154420212,154420658,154420903	154411952,154412214,154413567,154414190,154420094,154420264,154420735,154421726	Gene ID= ENSG00000102125.15 TPM= 4.25 Transcript Type= NA
chrX	154420260	154421726	154420260	154421726	+	transcript2825.chrX.nnic@TAZ	transcript2825.chrX.nnic	protein_coding	154420260,154420658,154420903	154420459,154420735,154421726	Gene ID= ENSG00000102125.15 TPM= 13.81 Transcript Type= NA
chrX	154420281	154421726	154420281	154421726	+	transcript2826.chrX.nic@TAZ	transcript2826.chrX.nic	protein_coding	154420281,154420903	154420735,154421726	Gene ID= ENSG00000102125.15 TPM= 22.31 Transcript Type= NA
chrX	154411556	154421726	154411556	154421726	+	ENST00000601016.5@TAZ	ENST00000601016.5	protein_coding	154411556,154412086,154413207,154413482,154414101,154419543,154419705,154420032,154420212,154420658,154420903	154411952,154412214,154413252,154413567,154414190,154419623,154419746,154420094,154420264,154420735,154421726	Gene ID= ENSG00000102125.15 TPM= 13.81 Transcript Type= protein_coding
chrX	154411541	154421726	154411541	154421726	+	ENST00000475699.5@TAZ	ENST00000475699.5	protein_coding	154411541,154412086,154413207,154413482,154414101,154419543,154420032,154420212,154420658,154420903	154411952,154412214,154413252,154413567,154414190,154419623,154420094,154420264,154420735,154421726	Gene ID= ENSG00000102125.15 TPM= 4.25 Transcript Type= protein_coding
chrX	154411556	154421720	154411556	154421720	+	ENST00000612460.4@TAZ	ENST00000612460.4	protein_coding	154411556,154412086,154413207,154413482,154419543,154419705,154420032,154420212,154420658,154420903	154411952,154412214,154413252,154413567,154419623,154419746,154420094,154420264,154420735,154421720	Gene ID= ENSG00000102125.15 TPM= 7.44 Transcript Type= protein_coding
chrX	154424380	154428479	154424380	154428479	-	ENST00000360656.2@CH17-340M24.3	ENST00000360656.2	lincRNA	154428128,154424380	154428479,154424625	Gene ID= ENSG00000197180.2 TPM= 11.68 Transcript Type= lincRNA
chrX	154428632	154436516	154428632	154436516	+	ENST00000369762.6@ATP6AP1	ENST00000369762.6	protein_coding	154428632,154429048,154431830,154432266,154432931,154433635,154434208,154435139,154435274,154435682	154428853,154429174,154431904,154432459,154432971,154433720,154434446,154435186,154435505,154436516	Gene ID= ENSG00000071553.16 TPM= 287.85 Transcript Type= protein_coding
chrX	154430584	154436515	154430584	154436515	+	ENST00000619046.4@ATP6AP1	ENST00000619046.4	protein_coding	154430584,154431830,154432266,154432931,154433635,154434208,154435139,154435274,154435682	154431657,154431904,154432459,154432971,154433720,154434446,154435186,154435505,154436515	Gene ID= ENSG00000071553.16 TPM= 44.61 Transcript Type= protein_coding
chrX	154436920	154443467	154436920	154443467	+	ENST00000447750.6@GDI1	ENST00000447750.6	protein_coding	154436920,154438523,154438765,154439006,154439941,154440375,154441096,154441623,154442111,154442374,154442520	154437299,154438630,154438864,154439140,154440139,154440506,154441195,154441794,154442255,154442428,154443467	Gene ID= ENSG00000203879.11 TPM= 118.96 Transcript Type= protein_coding
chrX	154437157	154443467	154437157	154443467	+	transcript2847.chrX.nic@GDI1	transcript2847.chrX.nic	protein_coding	154437157,154438523,154438765,154439006,154439941,154441096,154441623,154442111,154442374,154442520	154437299,154438630,154438864,154439140,154440506,154441195,154441794,154442255,154442428,154443467	Gene ID= ENSG00000203879.11 TPM= 30.8 Transcript Type= NA
chrX	154444155	154450654	154444155	154450654	+	ENST00000464419.5@FAM50A	ENST00000464419.5	protein_coding	154444155,154445633,154445812,154446415,154448484,154448690,154448893,154449221,154449681,154450029,154450209,154450424	154444346,154445717,154445911,154446560,154448560,154448756,154448954,154449297,154449931,154450099,154450319,154450654	Gene ID= ENSG00000071859.14 TPM= 29.39 Transcript Type= retained_intron
chrX	154444126	154450654	154444126	154450654	+	ENST00000393600.7@FAM50A	ENST00000393600.7	protein_coding	154444126,154445633,154445812,154446415,154448484,154448690,154448893,154449221,154449681,154449883,154450029,154450209,154450424	154444346,154445717,154445911,154446560,154448560,154448756,154448954,154449297,154449735,154449931,154450099,154450319,154450654	Gene ID= ENSG00000071859.14 TPM= 114.36 Transcript Type= protein_coding
chrX	154477769	154479257	154477769	154479257	-	ENST00000357360.4@LAGE3	ENST00000357360.4	protein_coding	154478728,154478283,154477769	154479257,154478411,154478058	Gene ID= ENSG00000196976.7 TPM= 45.67 Transcript Type= protein_coding
chrX	154483717	154486716	154483717	154486716	-	transcript2861.chrX.nic@UBL4A	transcript2861.chrX.nic	protein_coding	154486537,154485771,154483717	154486716,154486333,154485649	Gene ID= ENSG00000102178.12 TPM= 5.31 Transcript Type= NA
chrX	154483717	154486670	154483717	154486670	-	ENST00000369660.8@UBL4A	ENST00000369660.8	protein_coding	154486537,154486228,154485771,154483717	154486670,154486333,154485979,154485649	Gene ID= ENSG00000102178.12 TPM= 126.4 Transcript Type= protein_coding
chrX	154487306	154490669	154487306	154490669	-	transcript2864.chrX.nic@SLC10A3	transcript2864.chrX.nic	protein_coding	154490307,154488584,154487306	154490669,154489082,154488496	Gene ID= ENSG00000126903.15 TPM= 7.44 Transcript Type= NA
chrX	154487306	154490690	154487306	154490690	-	ENST00000263512.5@SLC10A3	ENST00000263512.5	protein_coding	154490307,154487306	154490690,154489082	Gene ID= ENSG00000126903.15 TPM= 79.66 Transcript Type= protein_coding
chrX	154487343	154490663	154487343	154490663	-	ENST00000393587.4@SLC10A3	ENST00000393587.4	protein_coding	154490594,154490307,154487343	154490663,154490358,154489082	Gene ID= ENSG00000126903.15 TPM= 1.06 Transcript Type= protein_coding
chrX	154506171	154516191	154506171	154516191	-	transcript2880.chrX.nic@FAM3A	transcript2880.chrX.nic	protein_coding	154515760,154512823,154511848,154508474,154508289,154507811,154507406,154507203,154506171	154516191,154512936,154511871,154508652,154508347,154507861,154507490,154507329,154506906	Gene ID= ENSG00000071889.16 TPM= 5.81 Transcript Type= NA
chrX	154506171	154516257	154506171	154516257	-	transcript2882.chrX.nic@FAM3A	transcript2882.chrX.nic	protein_coding	154515760,154512823,154511848,154508474,154508289,154507811,154507406,154507203,154506171	154516257,154512936,154511871,154508597,154508347,154507882,154507490,154507329,154506906	Gene ID= ENSG00000071889.16 TPM= 9.58 Transcript Type= NA
chrX	154506159	154516236	154506159	154516236	-	ENST00000359889.9@FAM3A	ENST00000359889.9	protein_coding	154515910,154515760,154512823,154511848,154508474,154508289,154507811,154507406,154507203,154506159	154516236,154515812,154512936,154511871,154508597,154508347,154507861,154507490,154507329,154506906	Gene ID= ENSG00000071889.16 TPM= 27.68 Transcript Type= protein_coding
chrX	154506171	154516239	154506171	154516239	-	ENST00000447601.6@FAM3A	ENST00000447601.6	protein_coding	154515760,154512823,154511848,154508474,154508289,154507811,154507406,154507203,154506171	154516239,154512936,154511871,154508597,154508347,154507861,154507490,154507329,154506906	Gene ID= ENSG00000071889.16 TPM= 75.91 Transcript Type= protein_coding
chrX	154506160	154516242	154506160	154516242	-	ENST00000419205.5@FAM3A	ENST00000419205.5	protein_coding	154515760,154512823,154511848,154508474,154508289,154507406,154507203,154506160	154516242,154512936,154511871,154508597,154508347,154507490,154507329,154506906	Gene ID= ENSG00000071889.16 TPM= 14.89 Transcript Type= protein_coding
chrX	154506171	154516242	154506171	154516242	-	ENST00000621967.4@FAM3A	ENST00000621967.4	protein_coding	154515760,154512823,154512314,154511848,154508474,154508289,154507811,154507406,154507203,154506171	154516242,154512936,154512411,154511871,154508597,154508347,154507861,154507490,154507329,154506906	Gene ID= ENSG00000071889.16 TPM= 7.93 Transcript Type= nonsense_mediated_decay
chrX	154506204	154516242	154506204	154516242	-	ENST00000434658.6@FAM3A	ENST00000434658.6	protein_coding	154515760,154512823,154512314,154511848,154508474,154508289,154507406,154507203,154506204	154516242,154512936,154512411,154511871,154508597,154508347,154507490,154507329,154506906	Gene ID= ENSG00000071889.16 TPM= 1.06 Transcript Type= nonsense_mediated_decay
chrX	154547307	154565046	154547307	154565046	+	ENST00000594239.5@IKBKG	ENST00000594239.5	protein_coding	154547307,154551988,154556165,154558532,154560407,154561688,154562810,154563559,154563959,154564319	154547745,154552189,154556376,154558650,154560559,154561784,154562953,154563701,154564020,154565046	Gene ID= ENSG00000269335.5 TPM= 27.62 Transcript Type= protein_coding
chrX	154547641	154565033	154547641	154565033	+	ENST00000617207.4@IKBKG	ENST00000617207.4	protein_coding	154547641,154551988,154556165,154558535,154560407,154561688,154562810,154563559,154563959,154564319	154547745,154552189,154556376,154558650,154560559,154561784,154562953,154563701,154564020,154565033	Gene ID= ENSG00000269335.5 TPM= 2.12 Transcript Type= protein_coding
chrX	154678978	154751175	154678978	154751175	-	transcript2898.chrX.nic@GAB3	transcript2898.chrX.nic	protein_coding	154750954,154716026,154713207,154712229,154700004,154699294,154697132,154695917,154680132,154678978	154751175,154716329,154713426,154712701,154700059,154699513,154697213,154696019,154680248,154679339	Gene ID= ENSG00000160219.11 TPM= 6.37 Transcript Type= NA
chrX	154676163	154751070	154676163	154751070	-	transcript2900.chrX.nnic@GAB3	transcript2900.chrX.nnic	protein_coding	154750954,154700004,154699294,154680132,154676163	154751070,154700059,154699513,154680248,154678294	Gene ID= ENSG00000160219.11 TPM= 5.31 Transcript Type= NA
chrX	154762828	154776325	154762828	154776325	+	transcript2907.chrX.nic@DKC1	transcript2907.chrX.nic	protein_coding	154762828,154764899,154765444,154765907,154766216,154766997,154767256,154768302,154769167,154770759,154773131,154774602,154775195,154776187	154762981,154764966,154765530,154765998,154766400,154767061,154767382,154768432,154769310,154770879,154773249,154774705,154775273,154776325	Gene ID= ENSG00000130826.17 TPM= 9.56 Transcript Type= NA
chrX	154762742	154777688	154762742	154777688	+	ENST00000620277.4@DKC1	ENST00000620277.4	protein_coding	154762742,154764899,154765444,154765907,154766216,154766997,154767256,154768302,154769167,154770759,154773131,154774602,154776187,154776799	154762981,154764966,154765530,154765998,154766400,154767061,154767382,154768432,154769310,154770879,154773249,154775273,154776324,154777688	Gene ID= ENSG00000130826.17 TPM= 1.06 Transcript Type= protein_coding
chrX	154762756	154777689	154762756	154777689	+	ENST00000369550.9@DKC1	ENST00000369550.9	protein_coding	154762756,154764899,154765444,154765907,154766216,154766997,154767256,154768302,154769167,154770759,154773131,154774602,154775195,154776187,154776799	154762981,154764966,154765530,154765998,154766400,154767061,154767382,154768432,154769310,154770879,154773249,154774705,154775273,154776324,154777689	Gene ID= ENSG00000130826.17 TPM= 23.37 Transcript Type= protein_coding
chrX	154778684	154805521	154778684	154805521	-	ENST00000369534.7@MPP1	ENST00000369534.7	protein_coding	154805272,154792142,154791769,154790983,154789954,154786204,154785051,154784028,154783427,154781600,154781239,154778684	154805521,154792285,154791847,154791068,154790022,154786400,154785157,154784108,154783507,154781802,154781313,154779353	Gene ID= ENSG00000130830.14 TPM= 40.36 Transcript Type= protein_coding
chrX	154835795	155022753	154835795	155022753	-	ENST00000360256.8@F8	ENST00000360256.8	protein_coding	155022410,154999479,154996973,154992936,154987237,154984687,154969331,154966426,154965970,154961075,154956957,154953892,154947698,154928571,154906420,154904811,154904296,154903906,154902051,154901371,154899866,154896077,154863083,154861718,154860432,154835795	155022753,154999600,154997095,154993148,154987305,154984803,154969552,154966687,154966141,154961168,154957171,154954042,154947907,154931676,154906573,154905023,154904524,154904088,154902167,154901442,154899951,154896232,154863227,154861866,154860608,154837752	Gene ID= ENSG00000185010.13 TPM= 5.31 Transcript Type= protein_coding
chrX	154835788	154886317	154835788	154886317	-	ENST00000330287.10@F8	ENST00000330287.10	protein_coding	154886134,154863083,154861718,154860432,154835788	154886317,154863227,154861866,154860608,154837752	Gene ID= ENSG00000185010.13 TPM= 6.37 Transcript Type= protein_coding
chrX	154886349	154888061	154886349	154888061	+	ENST00000610495.1@F8A1	ENST00000610495.1	protein_coding	154886349	154888061	Gene ID= ENSG00000277203.1 TPM= 257.04 Transcript Type= protein_coding
chrX	154930153	155022940	154930153	155022940	-	transcript2920.chrX.nic@F8	transcript2920.chrX.nic	protein_coding	155022410,154999479,154996973,154992936,154987237,154984687,154969331,154966426,154965970,154961075,154956957,154953892,154947698,154930153	155022940,154999600,154997095,154993148,154987305,154984803,154969552,154966687,154966141,154961168,154957171,154954042,154947907,154931676	Gene ID= ENSG00000185010.13 TPM= 29.74 Transcript Type= NA
chrX	154983232	155022723	154983232	155022723	-	transcript2922.chrX.nic@F8	transcript2922.chrX.nic	protein_coding	155022410,154999479,154996973,154992936,154987237,154983232	155022723,154999600,154997095,154993148,154987305,154984803	Gene ID= ENSG00000185010.13 TPM= 2.12 Transcript Type= NA
chrX	155026685	155060303	155026685	155060303	+	ENST00000369498.7@FUNDC2	ENST00000369498.7	protein_coding	155026685,155033403,155046509,155051670,155054595	155027071,155033553,155046584,155051801,155060303	Gene ID= ENSG00000165775.17 TPM= 3.19 Transcript Type= protein_coding
chrX	155033426	155055106	155033426	155055106	+	ENST00000456179.1@FUNDC2	ENST00000456179.1	protein_coding	155033426,155046509,155047369,155051670,155054595	155033553,155046584,155047391,155051801,155055106	Gene ID= ENSG00000165775.17 TPM= 4.25 Transcript Type= nonsense_mediated_decay
chrX	155061622	155071362	155061622	155071362	-	ENST00000369484.7@CMC4	ENST00000369484.7	protein_coding	155070694,155063966,155061622	155071362,155064033,155061991	Gene ID= ENSG00000182712.15 TPM= 106.22 Transcript Type= protein_coding
chrX	155064034	155071226	155064034	155071226	-	ENST00000369476.7@MTCP1	ENST00000369476.7	protein_coding	155070694,155065906,155065619,155065486,155064034	155071226,155066057,155065789,155065537,155065399	Gene ID= ENSG00000214827.9 TPM= 1.06 Transcript Type= protein_coding
chrX	155061622	155071228	155061622	155071228	-	transcript2934.chrX.nnic@MTCP1	transcript2934.chrX.nnic	protein_coding	155070964,155063966,155061622	155071228,155064033,155061991	Gene ID= ENSG00000214827.9 TPM= 15.93 Transcript Type= NA
chrX	155071503	155123074	155071503	155123074	+	ENST00000369462.5@BRCC3	ENST00000369462.5	protein_coding	155071503,155072327,155073377,155077170,155078616,155089263,155090784,155099315,155116057,155116711,155119999,155121223	155071650,155072343,155073431,155077289,155078703,155089351,155090839,155099389,155116188,155116754,155120168,155123074	Gene ID= ENSG00000185515.14 TPM= 3.72 Transcript Type= protein_coding
chrX	155071499	155123072	155071499	155123072	+	ENST00000369459.6@BRCC3	ENST00000369459.6	protein_coding	155071499,155072327,155073377,155077170,155078616,155089263,155090784,155116711,155119999,155121223	155071650,155072343,155073431,155077289,155078703,155089351,155090839,155116754,155120168,155123072	Gene ID= ENSG00000185515.14 TPM= 1.59 Transcript Type= protein_coding
chrX	155216366	155239817	155216366	155239817	+	ENST00000286428.5@VBP1	ENST00000286428.5	protein_coding	155216366,155220183,155227235,155228384,155236229,155238772	155216575,155220307,155227301,155228482,155236367,155239817	Gene ID= ENSG00000155959.10 TPM= 72.23 Transcript Type= protein_coding
chrX	155258241	155264589	155258241	155264589	-	ENST00000369454.3@RAB39B	ENST00000369454.3	protein_coding	155264074,155258241	155264589,155261229	Gene ID= ENSG00000155961.4 TPM= 1.06 Transcript Type= protein_coding
chrX	155276211	155334646	155276211	155334646	-	ENST00000369449.6@CLIC2	ENST00000369449.6	protein_coding	155334371,155299036,155298785,155279962,155279149,155276211	155334646,155299145,155298910,155280068,155279330,155278064	Gene ID= ENSG00000155962.12 TPM= 5.31 Transcript Type= protein_coding
chrX	155490115	155612936	155490115	155612936	-	ENST00000334398.7@TMLHE	ENST00000334398.7	protein_coding	155612792,155545096,155524456,155513986,155511673,155506898,155492357,155490115	155612936,155545277,155524632,155514265,155511792,155507134,155492495,155491666	Gene ID= ENSG00000185973.10 TPM= 11.68 Transcript Type= protein_coding
chrX	155492535	155612877	155492535	155612877	-	ENST00000369439.4@TMLHE	ENST00000369439.4	protein_coding	155612792,155545096,155524456,155513986,155511673,155506898,155492535	155612877,155545277,155524632,155514265,155511792,155507134,155492700	Gene ID= ENSG00000185973.10 TPM= 1.06 Transcript Type= protein_coding
chrX	155601379	155606813	155601379	155606813	+	transcript2980.chrX.nnic@NA	transcript2980.chrX.nnic	NA	155601379	155606813	Gene ID= novel_gene_chrX_2981 TPM= 2.12 Transcript Type= NA
chrX	155605184	155609865	155605184	155609865	+	transcript2982.chrX.nnic@NA	transcript2982.chrX.nnic	NA	155605184	155609865	Gene ID= novel_gene_chrX_2983 TPM= 2.12 Transcript Type= NA
chrX	155881293	155943769	155881293	155943769	+	ENST00000286448.11@VAMP7	ENST00000286448.11	protein_coding	155881293,155889458,155895623,155898112,155900497,155919813,155939701,155941883	155881448,155889612,155895680,155898249,155900587,155919880,155939793,155943769	Gene ID= ENSG00000124333.15 TPM= 16.99 Transcript Type= protein_coding
chrY	304750	318819	304750	318819	-	ENST00000326153.9_PAR_Y@GTPBP6	ENST00000326153.9_PAR_Y	protein_coding	318439,316914,315229,314890,314150,312766,311419,307732,307360,304750	318819,317051,315299,315020,314217,312924,311627,307880,307512,305197	Gene ID= ENSG00000178605.13_PAR_Y TPM= 60.54 Transcript Type= protein_coding
chrY	333963	386710	333963	386710	-	ENST00000390665.8_PAR_Y@PPP2R3B	ENST00000390665.8_PAR_Y	protein_coding	386368,361405,347590,347234,346701,346174,345516,341883,341307,340765,338778,338604,333963	386710,361590,347693,347336,346775,346260,345672,341931,341396,340940,338896,338710,334517	Gene ID= ENSG00000167393.17_PAR_Y TPM= 10.09 Transcript Type= protein_coding
chrY	334235	341711	334235	341711	-	ENST00000479438.6_PAR_Y@PPP2R3B	ENST00000479438.6_PAR_Y	protein_coding	341307,340765,338778,338604,334235	341711,340940,338896,338710,334517	Gene ID= ENSG00000167393.17_PAR_Y TPM= 23.9 Transcript Type= retained_intron
chrY	1336616	1382685	1336616	1382685	+	ENST00000331035.9_PAR_Y@IL3RA	ENST00000331035.9_PAR_Y	protein_coding	1336616,1341728,1345316,1348431,1352100,1352322,1356221,1358861,1365138,1378659,1381023,1382391	1336926,1341829,1345434,1348545,1352232,1352506,1356336,1358887,1365252,1378764,1381104,1382685	Gene ID= ENSG00000185291.11_PAR_Y TPM= 13.81 Transcript Type= protein_coding
chrY	1386152	1392724	1386152	1392724	-	ENST00000381401.10_PAR_Y@SLC25A6	ENST00000381401.10_PAR_Y	protein_coding	1391899,1389241,1387279,1386152	1392724,1389727,1387419,1386759	Gene ID= ENSG00000169100.13_PAR_Y TPM= 255.98 Transcript Type= protein_coding
chrY	1403141	1452873	1403141	1452873	-	ENST00000381317.8_PAR_Y@ASMTL	ENST00000381317.8_PAR_Y	protein_coding	1452748,1442186,1439097,1435694,1435022,1432269,1427734,1425525,1421658,1418982,1417973,1412732,1403141	1452873,1442317,1439144,1435758,1435083,1432377,1428121,1425687,1421842,1419114,1418116,1412854,1403489	Gene ID= ENSG00000169093.15_PAR_Y TPM= 28.68 Transcript Type= protein_coding
chrY	1591623	1602502	1591623	1602502	+	ENST00000474361.6_PAR_Y@AKAP17A	ENST00000474361.6_PAR_Y	protein_coding	1591623,1593444,1595384,1599192,1600138,1600659	1591769,1594224,1595532,1599432,1600207,1602502	Gene ID= ENSG00000197976.11_PAR_Y TPM= 3.19 Transcript Type= nonsense_mediated_decay
chrY	1591593	1602514	1591593	1602514	+	ENST00000313871.8_PAR_Y@AKAP17A	ENST00000313871.8_PAR_Y	protein_coding	1591593,1593444,1595384,1599192,1600659	1591769,1594224,1595532,1599432,1602514	Gene ID= ENSG00000197976.11_PAR_Y TPM= 31.86 Transcript Type= protein_coding
chrY	2691285	2733674	2691285	2733674	+	transcript15.chrY.nnic@CD99	transcript15.chrY.nnic	protein_coding	2691285,2714422,2717605,2719661,2720356,2722627,2723314,2726260,2727293,2733357	2691427,2714454,2717652,2719705,2720424,2722674,2723364,2726373,2727347,2733674	Gene ID= ENSG00000002586.18_PAR_Y TPM= 2.84 Transcript Type= NA
chrY	2691179	2741309	2691179	2741309	+	ENST00000381192.8_PAR_Y@CD99	ENST00000381192.8_PAR_Y	protein_coding	2691179,2714422,2717605,2719661,2720356,2722627,2723314,2726260,2738200,2740779	2691427,2714454,2717652,2719705,2720424,2722674,2723364,2726373,2738256,2741309	Gene ID= ENSG00000002586.18_PAR_Y TPM= 170.66 Transcript Type= protein_coding
chrY	2691280	2733667	2691280	2733667	+	ENST00000381184.6_PAR_Y@CD99	ENST00000381184.6_PAR_Y	protein_coding	2691280,2714422,2717605,2719661,2720356,2722627,2723314,2726260,2727293,2733357	2691427,2714454,2717652,2719705,2720424,2722674,2723364,2726373,2727343,2733667	Gene ID= ENSG00000002586.18_PAR_Y TPM= 3.9 Transcript Type= protein_coding
chrY	57067813	57130289	57067813	57130289	+	ENST00000286448.11_PAR_Y@VAMP7	ENST00000286448.11_PAR_Y	protein_coding	57067813,57075978,57082143,57084632,57087017,57106333,57126221,57128403	57067968,57076132,57082200,57084769,57087107,57106400,57126313,57130289	Gene ID= ENSG00000124333.15_PAR_Y TPM= 16.99 Transcript Type= protein_coding
chrY	57067895	57130289	57067895	57130289	+	ENST00000262640.11_PAR_Y@VAMP7	ENST00000262640.11_PAR_Y	protein_coding	57067895,57075978,57082143,57084632,57087017,57126221,57128403	57067968,57076132,57082200,57084769,57087107,57126313,57130289	Gene ID= ENSG00000124333.15_PAR_Y TPM= 1.06 Transcript Type= protein_coding